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Overview

ID MAG00713
Name DPH3_bin.17
Sample SMP0021
Taxonomy
Kingdom Bacteria
Phylum Desulfobacterota
Class Syntrophobacteria
Order Syntrophobacterales
Family
Genus
Species
Assembly information
Completeness (%) 83.66
Contamination (%) 3.09
GC content (%) 57.0
N50 (bp) 6,563
Genome size (bp) 3,069,725

Location

Module

Module ID Module name Total genes Total steps Contain genes Contain steps Percentage of genes Percentage of steps

Genes2851

Gene name Description KEGG GOs EC E-value Score Sequence
DPH3_k127_10018962_0 PFAM Pyridine nucleotide-disulphide oxidoreductase - - - 2.694e-286 891.0
DPH3_k127_10018962_1 2Fe-2S iron-sulfur cluster binding domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001367 331.0
DPH3_k127_10018962_2 - - - - 0.00000000000000000000000000000000000000000000000000004174 193.0
DPH3_k127_10018962_3 - - - - 0.0000000000000000000000000001485 115.0
DPH3_k127_10018962_4 Domain in cystathionine beta-synthase and other proteins. - - - 0.0000000000000000000000001835 111.0
DPH3_k127_10019490_0 TIGRFAM cell shape determining protein, MreB Mrl family K03569 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001079 451.0
DPH3_k127_10019490_1 tRNA synthetases class II (D, K and N) K04568 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001602 371.0
DPH3_k127_10019490_2 Involved in peptide bond synthesis. Stimulates efficient translation and peptide-bond synthesis on native or reconstituted 70S ribosomes in vitro. Probably functions indirectly by altering the affinity of the ribosome for aminoacyl-tRNA, thus increasing their reactivity as acceptors for peptidyl transferase K02356 GO:0003674,GO:0003676,GO:0003723,GO:0003746,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006412,GO:0006414,GO:0006518,GO:0006807,GO:0008135,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0019538,GO:0034641,GO:0034645,GO:0043043,GO:0043170,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044424,GO:0044464,GO:0071704,GO:0097159,GO:1901363,GO:1901564,GO:1901566,GO:1901576 - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002583 302.0
DPH3_k127_10033590_0 Catalyzes the irreversible transfer of a propylamine group from the amino donor S-adenosylmethioninamine (decarboxy- AdoMet) to putrescine (1,4-diaminobutane) to yield spermidine K00797 - 2.5.1.16 3.312e-273 865.0
DPH3_k127_10033590_1 Patatin-like phospholipase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002996 494.0
DPH3_k127_10033590_2 PHP domain protein - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004308 407.0
DPH3_k127_10033590_4 Protein of unknown function (DUF5132) - - - 0.00000000000000000007797 92.0
DPH3_k127_10048351_0 - - - - 0.00000000000000000000000000000000000000000000000000000000002628 214.0
DPH3_k127_10048351_1 Isochorismatase family - - - 0.00000000000000000000000000000000003437 141.0
DPH3_k127_10048351_2 - - - - 0.000000000000000000000000000001848 121.0
DPH3_k127_10048351_3 - - - - 0.00003019 55.0
DPH3_k127_10056647_0 Domain of unknown function (DUF2088) - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000002556 301.0
DPH3_k127_10056647_1 ABC transporter K10112 - - 0.000000000000000000000000000000000000000000000000000007899 192.0
DPH3_k127_10056647_2 Belongs to the binding-protein-dependent transport system permease family K02057 - - 0.00007828 46.0
DPH3_k127_1006214_0 Belongs to the lyase 1 family. Adenylosuccinate lyase subfamily K01756 - 4.3.2.2 5.069e-215 677.0
DPH3_k127_1006214_1 Catalyzes the reversible conversion of 2- phosphoglycerate into phosphoenolpyruvate. It is essential for the degradation of carbohydrates via glycolysis K01689 - 4.2.1.11 3.359e-210 663.0
DPH3_k127_1006214_2 Catalyzes the conversion of GDP-D-mannose to GDP-4- dehydro-6-deoxy-D-mannose K01711 - 4.2.1.47 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003219 597.0
DPH3_k127_1006214_3 FAD dependent oxidoreductase K16885 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007891 581.0
DPH3_k127_1006214_4 Belongs to the SfsA family K06206 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000194 248.0
DPH3_k127_1006214_5 translation release factor activity - - - 0.0000000000000000000000000000000000000000000000000000001656 211.0
DPH3_k127_1006214_6 FKBP-type peptidyl-prolyl cis-trans isomerase K01802 - 5.2.1.8 0.0000000000000000000000000000000000000000000000000007339 188.0
DPH3_k127_1006214_7 PFAM peptidase U32 K08303 - - 0.000000000000000000000000000000000004798 141.0
DPH3_k127_10088228_0 PFAM Bacterial extracellular solute-binding proteins, family 5 Middle K02035,K13893 - - 8.315e-238 747.0
DPH3_k127_10088228_1 PFAM Binding-protein-dependent transport system inner membrane component K02033 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004587 533.0
DPH3_k127_10088228_2 PFAM binding-protein-dependent transport systems inner membrane component K13895 - - 0.000000001039 63.0
DPH3_k127_10093984_0 Catalyzes the reversible interconversion of serine and glycine with tetrahydrofolate (THF) serving as the one-carbon carrier. This reaction serves as the major source of one-carbon groups required for the biosynthesis of purines, thymidylate, methionine, and other important biomolecules. Also exhibits THF- independent aldolase activity toward beta-hydroxyamino acids, producing glycine and aldehydes, via a retro-aldol mechanism K00600 - 2.1.2.1 5.82e-207 652.0
DPH3_k127_10093984_1 Catalyzes the condensation reaction of fatty acid synthesis by the addition to an acyl acceptor of two carbons from malonyl-ACP K09458 - 2.3.1.179 3.074e-204 642.0
DPH3_k127_10093984_2 Enoyl-(Acyl carrier protein) reductase K00059 - 1.1.1.100 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003226 362.0
DPH3_k127_10093984_3 sugar-phosphate isomerases, RpiB LacA LacB family K01808 - 5.3.1.6 0.00000000000000000000000000000000000000000000000000000000001746 209.0
DPH3_k127_10093984_4 Converts 2,5-diamino-6-(ribosylamino)-4(3h)-pyrimidinone 5'-phosphate into 5-amino-6-(ribosylamino)-2,4(1h,3h)- pyrimidinedione 5'-phosphate K11752 - 1.1.1.193,3.5.4.26 0.000000000000000000000000000002826 122.0
DPH3_k127_10093984_5 electron transfer flavoprotein, alpha subunit K03522 - - 0.000000008684 56.0
DPH3_k127_10110969_0 cAMP phosphodiesterases class-II K01120 - 3.1.4.17 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003083 304.0
DPH3_k127_10110969_1 - - - - 0.00000000000000000000000000000001491 130.0
DPH3_k127_10123938_0 Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family K07788 - - 2.464e-254 797.0
DPH3_k127_1012895_0 DNA-directed DNA polymerase activity K02337 GO:0003674,GO:0003824,GO:0003887,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006139,GO:0006259,GO:0006260,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009360,GO:0009987,GO:0016740,GO:0016772,GO:0016779,GO:0018130,GO:0019438,GO:0032991,GO:0034061,GO:0034641,GO:0034645,GO:0034654,GO:0042575,GO:0043170,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044271,GO:0044424,GO:0044444,GO:0044464,GO:0044776,GO:0046483,GO:0061695,GO:0071704,GO:0071897,GO:0090304,GO:0140097,GO:1901360,GO:1901362,GO:1901576,GO:1902494,GO:1990234 2.7.7.7 0.0 1144.0
DPH3_k127_1012895_1 PFAM peptidase U32 K08303 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003945 617.0
DPH3_k127_1012895_2 positive regulation of DNA-dependent DNA replication initiation K02339 GO:0005575,GO:0005622,GO:0005623,GO:0006275,GO:0008150,GO:0009314,GO:0009360,GO:0009628,GO:0009889,GO:0009891,GO:0009893,GO:0010556,GO:0010557,GO:0010604,GO:0019219,GO:0019222,GO:0030174,GO:0031323,GO:0031325,GO:0031326,GO:0031328,GO:0032298,GO:0032991,GO:0042575,GO:0043846,GO:0043847,GO:0044424,GO:0044464,GO:0045740,GO:0045935,GO:0048518,GO:0048522,GO:0050789,GO:0050794,GO:0050896,GO:0051052,GO:0051054,GO:0051171,GO:0051173,GO:0060255,GO:0061695,GO:0065007,GO:0080090,GO:0090329,GO:1902494,GO:1990234,GO:2000105,GO:2000112 2.7.7.7 0.00000000000000000000000000000000000008971 147.0
DPH3_k127_1012895_3 ABC transporter K06158 - - 0.0000000000000000000000000000000007108 136.0
DPH3_k127_1012895_4 Protein of unknown function (DUF498/DUF598) - - - 0.000000000000000000000000000000638 124.0
DPH3_k127_10152377_0 Acyl-CoA dehydrogenase, C-terminal domain K00253 - 1.3.8.4 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005299 346.0
DPH3_k127_10152377_1 Metallo-beta-lactamase superfamily - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001595 345.0
DPH3_k127_10152377_2 L11 methyltransferase K02687 - - 0.00000000000000000000000004217 119.0
DPH3_k127_10157322_0 Protein of unknown function, DUF255 K06888 - - 5.458e-274 860.0
DPH3_k127_10157322_1 ATPase, P-type (transporting), HAD superfamily, subfamily IC K17686 - 3.6.3.54 1.141e-222 706.0
DPH3_k127_10157322_2 Seven times multi-haem cytochrome CxxCH - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007199 559.0
DPH3_k127_10157322_3 Redoxin K03386 - 1.11.1.15 0.0000000000000000000000000000000000000000000000000000000000000000000000000000206 265.0
DPH3_k127_10157322_4 Rhodanese Homology Domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000007094 258.0
DPH3_k127_10157322_5 Catalyzes the formation of the isocyclic ring in chlorophyll biosynthesis. Mediates the cyclase reaction, which results in the formation of divinylprotochlorophyllide (Pchlide) characteristic of all chlorophylls from magnesium-protoporphyrin IX 13-monomethyl ester (MgPMME) - - - 0.0000000000000000000000000000000000000000000000000000000000003647 214.0
DPH3_k127_10157322_6 Flavodoxin domain - - - 0.000000000000000000000000000000000000000000000000000000002497 203.0
DPH3_k127_10157322_7 AhpC/TSA family - - - 0.0000000000000000000000000000000000000000000000003848 183.0
DPH3_k127_10157322_8 - - - - 0.000000000000000000000003424 103.0
DPH3_k127_10157322_9 Heavy-metal-associated domain K07213 - - 0.0000000000000002567 80.0
DPH3_k127_10194124_0 Conserved carboxylase domain K01571,K01960,K03416 - 2.1.3.1,4.1.1.3,6.4.1.1 4.544e-288 893.0
DPH3_k127_10194124_1 Acetyl-CoA carboxylase carboxyltransferase component (subunits alpha and beta) K01966,K17489 - 2.1.3.1,2.1.3.15,6.4.1.3 9.355e-275 854.0
DPH3_k127_10194124_2 Catalyzes the reversible oxidation of malate to oxaloacetate K00024 GO:0003674,GO:0003824,GO:0006082,GO:0006091,GO:0006099,GO:0006101,GO:0008150,GO:0008152,GO:0009060,GO:0009987,GO:0015980,GO:0016491,GO:0016614,GO:0016615,GO:0016999,GO:0017144,GO:0019752,GO:0043436,GO:0044237,GO:0044238,GO:0044281,GO:0045333,GO:0055114,GO:0071704,GO:0072350 1.1.1.37 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007505 402.0
DPH3_k127_10194124_3 PFAM Antibiotic biosynthesis monooxygenase - - - 0.000000000000000000005388 96.0
DPH3_k127_1021880_0 Response regulator with CheY-like receiver, AAA-type ATPase, and DNA-binding domains - - - 0.000000000000000000000000000000000000000000000000006863 184.0
DPH3_k127_1021880_1 Response regulator with CheY-like receiver, AAA-type ATPase, and DNA-binding domains - - - 0.000000000000000000000000000000000000000000006598 168.0
DPH3_k127_1021880_2 Dinitrogenase iron-molybdenum cofactor - - - 0.00000000000000000000002859 100.0
DPH3_k127_10252772_0 Methylenetetrahydrofolate reductase K00297,K00547 - 1.5.1.20,2.1.1.10 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002775 531.0
DPH3_k127_10252772_1 - - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001555 435.0
DPH3_k127_10252772_2 Methylene-tetrahydrofolate reductase C terminal - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006676 358.0
DPH3_k127_10252772_3 4Fe-4S ferredoxin iron-sulfur binding domain protein - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002671 331.0
DPH3_k127_10252772_4 PFAM methyl-viologen-reducing hydrogenase delta subunit - - - 0.000000000000000000000000000000000000000000000000003469 184.0
DPH3_k127_10255450_0 HD domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001222 588.0
DPH3_k127_10255450_1 PFAM Glycosyl transferase family 2 - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000945 477.0
DPH3_k127_10255450_10 PGAP1-like protein - - - 0.00000000000000000000000000000000000000000000000000000000005489 214.0
DPH3_k127_10255450_11 Putative Fe-S cluster - - - 0.000000000000000005598 92.0
DPH3_k127_10255450_2 Catalyzes the reductive methylation of 2'-deoxyuridine- 5'-monophosphate (dUMP) to 2'-deoxythymidine-5'-monophosphate (dTMP) while utilizing 5,10-methylenetetrahydrofolate (mTHF) as the methyl donor, and NAD(P)H and FADH(2) as the reductant K03465 - 2.1.1.148 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001706 393.0
DPH3_k127_10255450_3 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003029 391.0
DPH3_k127_10255450_4 Domain of unknown function (DUF3786) - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000001242 290.0
DPH3_k127_10255450_5 Phosphorylation of dTMP to form dTDP in both de novo and salvage pathways of dTTP synthesis K00943 GO:0003674,GO:0003824,GO:0004798,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006139,GO:0006220,GO:0006221,GO:0006227,GO:0006233,GO:0006235,GO:0006725,GO:0006753,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0009041,GO:0009058,GO:0009117,GO:0009123,GO:0009132,GO:0009133,GO:0009138,GO:0009139,GO:0009141,GO:0009142,GO:0009147,GO:0009148,GO:0009165,GO:0009186,GO:0009189,GO:0009196,GO:0009197,GO:0009200,GO:0009202,GO:0009211,GO:0009212,GO:0009219,GO:0009221,GO:0009262,GO:0009263,GO:0009265,GO:0009394,GO:0009987,GO:0016301,GO:0016310,GO:0016740,GO:0016772,GO:0016776,GO:0018130,GO:0019205,GO:0019438,GO:0019637,GO:0019692,GO:0034641,GO:0034654,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0044424,GO:0044464,GO:0046072,GO:0046075,GO:0046077,GO:0046385,GO:0046483,GO:0046940,GO:0050145,GO:0055086,GO:0071704,GO:0072527,GO:0072528,GO:0090407,GO:1901135,GO:1901137,GO:1901293,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576 2.7.4.9 0.000000000000000000000000000000000000000000000000000000000000000000000002097 250.0
DPH3_k127_10255450_6 GMP synthase (glutamine-hydrolyzing) activity K01951 - 6.3.5.2 0.00000000000000000000000000000000000000000000000000000000000000000000001502 253.0
DPH3_k127_10255450_7 Membrane - - - 0.000000000000000000000000000000000000000000000000000000000000000000003786 243.0
DPH3_k127_10255450_8 Mazg nucleotide pyrophosphohydrolase - - - 0.00000000000000000000000000000000000000000000000000000000000000001543 229.0
DPH3_k127_10255450_9 HAD-hyrolase-like K01560 - 3.8.1.2 0.0000000000000000000000000000000000000000000000000000000000003254 220.0
DPH3_k127_10292700_0 CoA binding domain K01905,K22224 - 6.2.1.13 3.46e-322 997.0
DPH3_k127_10292700_1 Belongs to the N(4) N(6)-methyltransferase family K00571,K07319 GO:0003674,GO:0003824,GO:0006139,GO:0006259,GO:0006304,GO:0006305,GO:0006306,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0008168,GO:0008757,GO:0009007,GO:0009008,GO:0009987,GO:0016740,GO:0016741,GO:0032259,GO:0032775,GO:0034641,GO:0043170,GO:0043412,GO:0043414,GO:0044237,GO:0044238,GO:0044260,GO:0044728,GO:0046483,GO:0071704,GO:0090304,GO:0140097,GO:1901360 2.1.1.72 0.00000000000000000000000000000000000000000000000000000000000000000000000006797 259.0
DPH3_k127_10292700_2 Thioesterase - - - 0.00000000000000000000000000000004652 125.0
DPH3_k127_10292700_4 Thioesterase - - - 0.00000000000000000000563 93.0
DPH3_k127_10336844_0 PFAM Acetyl-CoA hydrolase transferase K01067 - 3.1.2.1 1.292e-240 753.0
DPH3_k127_10336844_1 ABC-2 family transporter protein K01992 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005241 338.0
DPH3_k127_10336844_2 AAA domain, putative AbiEii toxin, Type IV TA system K01990 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001446 301.0
DPH3_k127_10336844_3 Integral membrane protein TerC family - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000004509 284.0
DPH3_k127_10336844_4 - - - - 0.00000000000000000000000000000000000000000000000000000009912 205.0
DPH3_k127_10344085_0 Catalyzes the base-exchange of a guanine (G) residue with the queuine precursor 7-aminomethyl-7-deazaguanine (PreQ1) at position 34 (anticodon wobble position) in tRNAs with GU(N) anticodons (tRNA-Asp, -Asn, -His and -Tyr). Catalysis occurs through a double-displacement mechanism. The nucleophile active site attacks the C1' of nucleotide 34 to detach the guanine base from the RNA, forming a covalent enzyme-RNA intermediate. The proton acceptor active site deprotonates the incoming PreQ1, allowing a nucleophilic attack on the C1' of the ribose to form the product. After dissociation, two additional enzymatic reactions on the tRNA convert PreQ1 to queuine (Q), resulting in the hypermodified nucleoside queuosine (7-(((4,5-cis-dihydroxy-2- cyclopenten-1-yl)amino)methyl)-7-deazaguanosine) K00773 - 2.4.2.29 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005253 519.0
DPH3_k127_10344085_1 Catalyzes the condensation reaction of fatty acid synthesis by the addition to an acyl acceptor of two carbons from malonyl-ACP K09458 - 2.3.1.179 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002668 341.0
DPH3_k127_10344085_2 KR domain - - - 0.0000000000000000000000000000000000000000000001384 177.0
DPH3_k127_10344085_3 Rubrerythrin - - - 0.00000000000000000000000000001422 123.0
DPH3_k127_10344085_4 SMART Cold shock protein K03704 - - 0.0000000000000000000000000009688 113.0
DPH3_k127_10344085_5 Phosphopantetheine attachment site - - - 0.00000000000000000000006138 105.0
DPH3_k127_1035787_0 Pyruvate phosphate dikinase PEP K01007 - 2.7.9.2 6.325e-241 763.0
DPH3_k127_1035787_1 PFAM Dual specificity - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007022 392.0
DPH3_k127_10367680_0 The UvrABC repair system catalyzes the recognition and processing of DNA lesions. UvrA is an ATPase and a DNA-binding protein. A damage recognition complex composed of 2 UvrA and 2 UvrB subunits scans DNA for abnormalities. When the presence of a lesion has been verified by UvrB, the UvrA molecules dissociate K03701 - - 0.0 1208.0
DPH3_k127_10367680_1 L-lactate permease K03303 - - 5.069e-196 622.0
DPH3_k127_10367680_2 TIGRFAM glutamate synthase (NADPH), homotetrameric K00266 - 1.4.1.13,1.4.1.14 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008471 558.0
DPH3_k127_10367680_3 ankyrin 3, node of Ranvier (ankyrin G) - - - 0.0000000000000000000000000000000000001556 159.0
DPH3_k127_10367680_4 response regulator - - - 0.00000000000000000000000000000000032 135.0
DPH3_k127_1036993_0 precorrin-6Y C5,15-methyltransferase (decarboxylating), CbiT subunit K00595 - 2.1.1.132 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006403 404.0
DPH3_k127_1036993_1 Catalyzes amidations at positions B, D, E, and G on adenosylcobyrinic A,C-diamide. NH(2) groups are provided by glutamine, and one molecule of ATP is hydrogenolyzed for each amidation K02232 - 6.3.5.10 0.000000000000000000000000000000000000000000000000000000000000000000000000005349 259.0
DPH3_k127_1036993_2 Tetrapyrrole (Corrin/Porphyrin) Methylases K05936 - 2.1.1.133,2.1.1.271 0.0000000000000000000000000000000000000000000000000000000000000006347 222.0
DPH3_k127_10394765_0 B-1 B cell differentiation - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003037 562.0
DPH3_k127_10394765_1 peptidase - - - 0.00000000000000000000000000361 120.0
DPH3_k127_10394765_2 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain K00170,K00187 - 1.2.7.1,1.2.7.7 0.0000001544 53.0
DPH3_k127_1040485_0 transport system permease K01997 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005663 400.0
DPH3_k127_1040485_1 Branched-chain amino acid transport system / permease component K01998 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001137 346.0
DPH3_k127_1040485_2 PFAM Extracellular ligand-binding receptor K01999 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001615 308.0
DPH3_k127_10437784_0 ion channel K05802 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001451 400.0
DPH3_k127_10442693_0 Involved in the assembly of lipopolysaccharide (LPS) at the surface of the outer membrane K04744 - - 4.319e-220 708.0
DPH3_k127_10442693_1 Catalyzes the NADPH-dependent reduction of N-acetyl-5- glutamyl phosphate to yield N-acetyl-L-glutamate 5-semialdehyde K00145 - 1.2.1.38 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007468 515.0
DPH3_k127_10442693_2 Mur ligase, middle domain K11754 - 6.3.2.12,6.3.2.17 0.00000000000000000000000000000000000000000000000000000000000000000000000000003422 263.0
DPH3_k127_10442693_3 Formation of pseudouridine at positions 38, 39 and 40 in the anticodon stem and loop of transfer RNAs K06173 GO:0001522,GO:0003674,GO:0003824,GO:0006139,GO:0006396,GO:0006399,GO:0006400,GO:0006725,GO:0006807,GO:0008033,GO:0008150,GO:0008152,GO:0009451,GO:0009982,GO:0009987,GO:0010467,GO:0016070,GO:0016853,GO:0016866,GO:0031119,GO:0034470,GO:0034641,GO:0034660,GO:0043170,GO:0043412,GO:0044237,GO:0044238,GO:0046483,GO:0071704,GO:0090304,GO:1901360 5.4.99.12 0.000000000000000000000000000000000000000000000000000000000000000000003334 241.0
DPH3_k127_10442693_4 This protein is one of the early assembly proteins of the 50S ribosomal subunit, although it is not seen to bind rRNA by itself. It is important during the early stages of 50S assembly K02871 GO:0003674,GO:0003676,GO:0003723,GO:0003729,GO:0003735,GO:0005198,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0006412,GO:0006518,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0015934,GO:0019538,GO:0022625,GO:0022626,GO:0032991,GO:0034641,GO:0034645,GO:0043043,GO:0043170,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:0071704,GO:0097159,GO:1901363,GO:1901564,GO:1901566,GO:1901576,GO:1990904 - 0.0000000000000000000000000000000000000000000000000000000000000001146 225.0
DPH3_k127_10442693_5 Belongs to the universal ribosomal protein uS9 family K02996 - - 0.00000000000000000000000000000000000000000000000000000000000002857 216.0
DPH3_k127_1044435_0 Homocysteine biosynthesis enzyme, sulfur-incorporation - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005816 407.0
DPH3_k127_1044435_1 Protein of unknown function (DUF1641) - - - 0.0000000000000000000000000000000000000000000000003317 185.0
DPH3_k127_1044435_2 Pyridine nucleotide-disulphide oxidoreductase K17218 - 1.8.5.4 0.000000000000000000000000000000000000000000006476 163.0
DPH3_k127_10449235_0 Myo-inositol-1-phosphate synthase K01858 - 5.5.1.4 5.715e-247 767.0
DPH3_k127_10449235_1 PFAM Aminotransferase class I and II K04720 - 4.1.1.81 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001506 399.0
DPH3_k127_10449235_2 Domain of unknown function (DUF1287) K09974 - - 0.00000000000000000000000000000000000000000000000000000000000000000006123 233.0
DPH3_k127_10449235_3 - - - - 0.000000000000000000000000002462 113.0
DPH3_k127_10463802_0 Belongs to the UDP-glucose GDP-mannose dehydrogenase family K00012 - 1.1.1.22 3.638e-222 694.0
DPH3_k127_10463802_1 Cell wall formation. Catalyzes the transfer of a GlcNAc subunit on undecaprenyl-pyrophosphoryl-MurNAc-pentapeptide (lipid intermediate I) to form undecaprenyl-pyrophosphoryl-MurNAc- (pentapeptide)GlcNAc (lipid intermediate II) K02563 - 2.4.1.227 3.623e-218 689.0
DPH3_k127_10463802_2 PFAM CBS domain containing protein - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004823 573.0
DPH3_k127_10463802_3 First step of the lipid cycle reactions in the biosynthesis of the cell wall peptidoglycan K01000 - 2.7.8.13 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001055 557.0
DPH3_k127_10463802_4 PFAM Glycosyl transferase family 2 K10012 - 2.4.2.53 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004148 311.0
DPH3_k127_10463802_5 Important for reducing fluoride concentration in the cell, thus reducing its toxicity K06199 GO:0003674,GO:0005215,GO:0005575,GO:0005623,GO:0005886,GO:0005887,GO:0006810,GO:0006811,GO:0006820,GO:0008150,GO:0008509,GO:0015075,GO:0015103,GO:0015318,GO:0015698,GO:0016020,GO:0016021,GO:0022857,GO:0031224,GO:0031226,GO:0034220,GO:0044425,GO:0044459,GO:0044464,GO:0051179,GO:0051234,GO:0055085,GO:0071944,GO:0098656,GO:0098660,GO:0098661,GO:1903424,GO:1903425 - 0.00000000000000000000000000000000000000000000004701 171.0
DPH3_k127_10463802_6 Lipid A Biosynthesis N-terminal domain - - - 0.00000000000000000000000000000000008996 135.0
DPH3_k127_10463802_7 BtpA family K06971 - - 0.000006353 50.0
DPH3_k127_10464393_0 Synthesizes alpha-1,4-glucan chains using ADP-glucose K00703 GO:0003674,GO:0003824,GO:0016740,GO:0016757 2.4.1.21 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001853 460.0
DPH3_k127_10464393_1 Uncharacterised protein family UPF0047 - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000002488 256.0
DPH3_k127_10464393_2 ATP binding to DnaK triggers the release of the substrate protein, thus completing the reaction cycle. Several rounds of ATP-dependent interactions between DnaJ, DnaK and GrpE are required for fully efficient folding. Also involved, together with DnaK and GrpE, in the DNA replication of plasmids through activation of initiation proteins K03686 - - 0.00000000002151 64.0
DPH3_k127_10477696_0 Catalyzes the ATP-dependent amidation of deamido-NAD to form NAD. Uses L-glutamine as a nitrogen source K01950 - 6.3.5.1 2.669e-236 742.0
DPH3_k127_10477696_1 Domain present in phytochromes and cGMP-specific phosphodiesterases. K02584 - - 3.908e-211 660.0
DPH3_k127_10477696_2 Modifies, by uridylylation and deuridylylation, the PII regulatory proteins (GlnB and homologs), in response to the nitrogen status of the cell that GlnD senses through the glutamine level. Under low glutamine levels, catalyzes the conversion of the PII proteins and UTP to PII-UMP and PPi, while under higher glutamine levels, GlnD hydrolyzes PII-UMP to PII and UMP (deuridylylation). Thus, controls uridylylation state and activity of the PII proteins, and plays an important role in the regulation of nitrogen assimilation and metabolism K00990 - 2.7.7.59 0.00000000000000000000000000000000000000000000000000000000000000000000000002272 257.0
DPH3_k127_10477696_3 Belongs to the P(II) protein family K04751 - - 0.000000000000000000000000000000000000000000000000003904 183.0
DPH3_k127_10499059_0 Bacterial extracellular solute-binding protein K05772 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005106 397.0
DPH3_k127_10499059_1 ATPase activity K01990,K02071,K06857,K16784,K16786 - 3.6.3.55 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001316 321.0
DPH3_k127_10499059_2 TIGRFAM hydrogenase expression formation protein HypE K04655 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003838 312.0
DPH3_k127_10499059_3 Binding-protein-dependent transport system inner membrane component K05773 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002745 308.0
DPH3_k127_10499059_4 Synthesizes selenophosphate from selenide and ATP K01008 - 2.7.9.3 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000002432 278.0
DPH3_k127_10499059_5 Belongs to the sulfur carrier protein TusA family - - - 0.000000000000000000000000000000000000000000000000000000000000001197 228.0
DPH3_k127_10499059_6 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase - - - 0.00000000000009308 76.0
DPH3_k127_10574633_0 TIGRFAM acetylornithine and succinylornithine K00821 - 2.6.1.11,2.6.1.17 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001529 550.0
DPH3_k127_10574633_1 Belongs to the acetylglutamate kinase family. ArgB subfamily K00930 GO:0003674,GO:0003824,GO:0003991,GO:0005488,GO:0006082,GO:0006520,GO:0006525,GO:0006526,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0008652,GO:0009058,GO:0009064,GO:0009084,GO:0009987,GO:0016053,GO:0016301,GO:0016310,GO:0016597,GO:0016740,GO:0016772,GO:0016774,GO:0019752,GO:0031406,GO:0034618,GO:0036094,GO:0043167,GO:0043168,GO:0043169,GO:0043177,GO:0043436,GO:0044237,GO:0044238,GO:0044249,GO:0044281,GO:0044283,GO:0046394,GO:0071704,GO:1901564,GO:1901566,GO:1901576,GO:1901605,GO:1901607 2.7.2.8 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001238 486.0
DPH3_k127_10574633_2 Reversibly catalyzes the transfer of the carbamoyl group from carbamoyl phosphate (CP) to the N(epsilon) atom of ornithine (ORN) to produce L-citrulline K00611,K09065 GO:0000050,GO:0003674,GO:0003824,GO:0004585,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006082,GO:0006520,GO:0006525,GO:0006526,GO:0006591,GO:0006807,GO:0008150,GO:0008152,GO:0008652,GO:0009058,GO:0009064,GO:0009084,GO:0009987,GO:0016053,GO:0016740,GO:0016741,GO:0016743,GO:0019627,GO:0019752,GO:0034641,GO:0042450,GO:0043436,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0044283,GO:0044424,GO:0044464,GO:0046394,GO:0071704,GO:0071941,GO:1901564,GO:1901566,GO:1901576,GO:1901605,GO:1901607 2.1.3.3,2.1.3.9 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002095 419.0
DPH3_k127_10574633_3 this subunit has chaperone activity. The binding of ATP and its subsequent hydrolysis by HslU are essential for unfolding of protein substrates subsequently hydrolyzed by HslV. HslU recognizes the N-terminal part of its protein substrates and unfolds these before they are guided to HslV for hydrolysis K03667 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000003292 254.0
DPH3_k127_10574633_4 Belongs to the argininosuccinate synthase family. Type 1 subfamily K01940 GO:0000050,GO:0000053,GO:0003674,GO:0003824,GO:0004055,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006082,GO:0006520,GO:0006525,GO:0006526,GO:0006575,GO:0006807,GO:0008150,GO:0008152,GO:0008652,GO:0009058,GO:0009064,GO:0009084,GO:0009987,GO:0016053,GO:0016874,GO:0016879,GO:0019627,GO:0019752,GO:0034641,GO:0043436,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0044283,GO:0044424,GO:0044464,GO:0046394,GO:0071704,GO:0071941,GO:0072350,GO:1901564,GO:1901566,GO:1901576,GO:1901605,GO:1901607 6.3.4.5 0.00000000000000000000000001479 110.0
DPH3_k127_10672311_0 Belongs to the pyruvate kinase family K00873 - 2.7.1.40 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001445 533.0
DPH3_k127_10672311_1 Phosphotransferase enzyme family K07102 - 2.7.1.221 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004079 369.0
DPH3_k127_10672311_2 Nucleotidyl transferase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001418 323.0
DPH3_k127_10672311_3 Serine/threonine phosphatases, family 2C, catalytic domain K01090,K20074 - 3.1.3.16 0.0000000000000000000000000000000000000000000000000000000000000001278 228.0
DPH3_k127_10672311_4 Serine/threonine phosphatases, family 2C, catalytic domain K01090,K20074 - 3.1.3.16 0.00008235 46.0
DPH3_k127_10672311_5 - - - - 0.0002839 44.0
DPH3_k127_10673440_0 PFAM Aldehyde ferredoxin oxidoreductase K03738 - 1.2.7.5 3.346e-266 821.0
DPH3_k127_10673440_1 4Fe-4S dicluster domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001977 393.0
DPH3_k127_10673440_2 Methylene-tetrahydrofolate reductase C terminal K00297 - 1.5.1.20 0.0000000000000000000000000000000000000000000000002452 183.0
DPH3_k127_10673440_3 Methylene-tetrahydrofolate reductase C terminal K00297 - 1.5.1.20 0.00000000000000000000000000000000000000002318 158.0
DPH3_k127_10699585_0 Cation transporter/ATPase, N-terminus K01531,K12955 - 3.6.3.2 0.0 1401.0
DPH3_k127_10699585_1 PFAM glycosyl transferase, family 35 K00688 - 2.4.1.1 0.0 1355.0
DPH3_k127_10699585_2 - - - - 0.00000000000504 70.0
DPH3_k127_10699585_3 - - - - 0.0000003951 59.0
DPH3_k127_10699875_0 Pyruvate flavodoxin ferredoxin oxidoreductase, thiamine diP-binding domain protein K00169 - 1.2.7.1 0.000000000000000000000002737 121.0
DPH3_k127_10708647_0 - - - - 0.0 1379.0
DPH3_k127_10708647_1 CoA binding domain K01905,K09181,K22224 - 6.2.1.13 2.818e-194 627.0
DPH3_k127_10708647_2 Pyridoxal-phosphate dependent enzyme K01754 - 4.3.1.19 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003877 501.0
DPH3_k127_10708647_3 Tetratricopeptide TPR_2 repeat protein - - - 0.000000000000000000000000000000000000000000000000000004048 205.0
DPH3_k127_10708647_4 PFAM Radical SAM - - - 0.0000000000000002966 78.0
DPH3_k127_10708647_5 IMG reference gene - - - 0.0000000000005864 70.0
DPH3_k127_1071482_0 PFAM ATP-binding region, ATPase domain protein K02482 - 2.7.13.3 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001508 565.0
DPH3_k127_1071482_1 Peptide chain release factor 2 directs the termination of translation in response to the peptide chain termination codons UGA and UAA K02836 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001023 452.0
DPH3_k127_1071482_2 reverse transcriptase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000172 438.0
DPH3_k127_1071482_3 Transfers the fatty acyl group on membrane lipoproteins K03820 - - 0.0000000000000000000000000000000000000009521 150.0
DPH3_k127_10751524_0 tRNA synthetases class I (E and Q), anti-codon binding domain K01886 - 6.1.1.18 8.901e-297 919.0
DPH3_k127_10751524_1 Multicopper oxidase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003587 526.0
DPH3_k127_10751524_2 PFAM Acyl-CoA dehydrogenase K19066,K19067 GO:0000166,GO:0003674,GO:0003824,GO:0005488,GO:0008150,GO:0008152,GO:0009987,GO:0016043,GO:0016491,GO:0016627,GO:0022607,GO:0036094,GO:0043167,GO:0043168,GO:0043933,GO:0044085,GO:0048037,GO:0050660,GO:0050662,GO:0051259,GO:0051262,GO:0052890,GO:0055114,GO:0065003,GO:0071840,GO:0097159,GO:1901265,GO:1901363 1.3.8.10,1.3.8.11 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006116 507.0
DPH3_k127_10751524_3 Belongs to the thiolase family K00626 - 2.3.1.9 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001752 468.0
DPH3_k127_10751524_4 PFAM 3-hydroxyacyl-CoA dehydrogenase K00074,K15016 - 1.1.1.157,1.1.1.35,4.2.1.17 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004314 451.0
DPH3_k127_10751524_5 Inositol monophosphatase family K01092 - 3.1.3.25 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004759 344.0
DPH3_k127_10751524_6 S-adenosyl-l-methionine hydroxide adenosyltransferase K22205 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000001997 281.0
DPH3_k127_10751524_7 Repeat domain in Vibrio, Colwellia, Bradyrhizobium and Shewanella - - - 0.0000000000000000000000000000000000000000000000000001179 210.0
DPH3_k127_10751524_8 - - - - 0.000000000000000000000000000000000000001707 151.0
DPH3_k127_10751524_9 Bacterial regulatory proteins, tetR family K03577 - - 0.0000000000000000000000000000000000006098 146.0
DPH3_k127_10779024_0 Histidine kinase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001989 443.0
DPH3_k127_10779024_1 PFAM metal-dependent phosphohydrolase HD sub - - - 0.000000000000000000000000000000000000000000000000000000000000000001477 232.0
DPH3_k127_10779024_2 PFAM GCN5-related N-acetyltransferase K09181 - - 0.0000000000001108 72.0
DPH3_k127_10792216_0 - - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001084 359.0
DPH3_k127_10792216_1 Methyltransferase K00575 - 2.1.1.80 0.000000000000000000000000000000000000000000000000000000000008219 217.0
DPH3_k127_10792216_2 - - - - 0.000000000000000000000000256 107.0
DPH3_k127_10792216_3 - - - - 0.000000000000000000000001323 104.0
DPH3_k127_10792216_4 PFAM Type IV pilus assembly PilZ - - - 0.0000000000001228 76.0
DPH3_k127_10795864_0 Belongs to the metallo-dependent hydrolases superfamily. DHOase family. Class I DHOase subfamily K01465 GO:0003674,GO:0003824,GO:0004038,GO:0004151,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006139,GO:0006144,GO:0006145,GO:0006220,GO:0006221,GO:0006725,GO:0006753,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0009056,GO:0009058,GO:0009112,GO:0009117,GO:0009165,GO:0009218,GO:0009220,GO:0009259,GO:0009260,GO:0009987,GO:0016787,GO:0016810,GO:0016812,GO:0018130,GO:0019438,GO:0019439,GO:0019637,GO:0019693,GO:0034641,GO:0034654,GO:0044237,GO:0044238,GO:0044248,GO:0044249,GO:0044270,GO:0044271,GO:0044281,GO:0044424,GO:0044464,GO:0046113,GO:0046390,GO:0046483,GO:0046700,GO:0055086,GO:0071704,GO:0072521,GO:0072523,GO:0072527,GO:0072528,GO:0090407,GO:1901135,GO:1901137,GO:1901293,GO:1901360,GO:1901361,GO:1901362,GO:1901564,GO:1901565,GO:1901566,GO:1901575,GO:1901576 3.5.2.3 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006499 565.0
DPH3_k127_10795864_1 Bacterial regulatory protein, Fis family K02667 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004852 372.0
DPH3_k127_10795864_2 aspartate ornithine carbamoyltransferase, carbamoyl-P binding domain K00609 GO:0003674,GO:0003824,GO:0004070,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006139,GO:0006220,GO:0006221,GO:0006725,GO:0006753,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009117,GO:0009165,GO:0009218,GO:0009220,GO:0009259,GO:0009260,GO:0009987,GO:0016740,GO:0016741,GO:0016743,GO:0018130,GO:0019438,GO:0019637,GO:0019693,GO:0034641,GO:0034654,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0044424,GO:0044464,GO:0046390,GO:0046483,GO:0055086,GO:0071704,GO:0072527,GO:0072528,GO:0090407,GO:1901135,GO:1901137,GO:1901293,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576 2.1.3.2 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001359 331.0
DPH3_k127_1082661_0 NADH dehydrogenase K00335 - 1.6.5.3 5.183e-199 638.0
DPH3_k127_1082661_1 Anaphase-promoting complex, cyclosome, subunit 3 - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001636 588.0
DPH3_k127_1082661_2 molybdenum cofactor K03638,K03831 - 2.7.7.75 0.00000000000000000000000000000000000000000000000000000000000005432 218.0
DPH3_k127_1082661_3 Mut7-C RNAse domain K09122 - - 0.0000000000000000000000000000000004234 136.0
DPH3_k127_1082661_6 - - - - 0.00000000000002307 75.0
DPH3_k127_1082661_7 Thioredoxin-like [2Fe-2S] ferredoxin K00334 - 1.6.5.3 0.00000000002165 66.0
DPH3_k127_10892694_0 ImcF-related N-terminal domain K11891 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003359 547.0
DPH3_k127_10892694_1 Bacterial Type VI secretion, VC_A0110, EvfL, ImpJ, VasE K11893 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001446 435.0
DPH3_k127_10892694_2 Type VI secretion system protein DotU K11892 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000009168 254.0
DPH3_k127_10897917_0 Catalyzes the NADPH-dependent reduction of glutamyl- tRNA(Glu) to glutamate 1-semialdehyde (GSA) K02492 - 1.2.1.70 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004641 555.0
DPH3_k127_10897917_1 Belongs to the FPP GGPP synthase family K02523,K13789 - 2.5.1.1,2.5.1.10,2.5.1.29,2.5.1.90 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003593 415.0
DPH3_k127_10897917_2 PFAM Cytochrome c assembly protein - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002425 324.0
DPH3_k127_10897917_3 TIGRFAM siroheme synthase K02304 - 1.3.1.76,4.99.1.4 0.00000000000000000000000000000000000000000000000000000000000004618 221.0
DPH3_k127_10910307_0 Belongs to the precorrin methyltransferase family K02302,K02303,K13542 - 1.3.1.76,2.1.1.107,4.2.1.75,4.99.1.4 8.418e-237 741.0
DPH3_k127_10910307_1 UvrD-like helicase C-terminal domain K03657 - 3.6.4.12 2.08e-207 667.0
DPH3_k127_10910307_2 Tetrapolymerization of the monopyrrole PBG into the hydroxymethylbilane pre-uroporphyrinogen in several discrete steps K01749 GO:0003674,GO:0003824,GO:0004418,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006725,GO:0006778,GO:0006779,GO:0006783,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009987,GO:0016740,GO:0016765,GO:0018130,GO:0019438,GO:0033013,GO:0033014,GO:0034641,GO:0042168,GO:0042440,GO:0044237,GO:0044249,GO:0044271,GO:0044424,GO:0044464,GO:0046148,GO:0046483,GO:0051186,GO:0051188,GO:0071704,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576 2.5.1.61 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006816 381.0
DPH3_k127_10910307_3 PFAM VacJ family lipoprotein K04754 - - 0.00000000000000000000000000000000000000000000000000000001553 207.0
DPH3_k127_10910307_4 Putative regulatory protein - - - 0.00000004781 54.0
DPH3_k127_10944558_0 Involved in peptidoglycan biosynthesis. Transports lipid-linked peptidoglycan precursors from the inner to the outer leaflet of the cytoplasmic membrane K03980 - - 6.052e-208 659.0
DPH3_k127_10944558_1 Diadenylate cyclase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002929 576.0
DPH3_k127_10944558_2 Domain of unknown function (DUF4126) - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000001024 293.0
DPH3_k127_10944558_3 Catalyzes the last two sequential reactions in the de novo biosynthetic pathway for UDP-N-acetylglucosamine (UDP- GlcNAc). The C-terminal domain catalyzes the transfer of acetyl group from acetyl coenzyme A to glucosamine-1-phosphate (GlcN-1-P) to produce N-acetylglucosamine-1-phosphate (GlcNAc-1-P), which is converted into UDP-GlcNAc by the transfer of uridine 5- monophosphate (from uridine 5-triphosphate), a reaction catalyzed by the N-terminal domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000004658 272.0
DPH3_k127_10944558_4 DNA repair - GO:0001510,GO:0003674,GO:0003824,GO:0006139,GO:0006396,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0008168,GO:0008173,GO:0009451,GO:0009987,GO:0010467,GO:0016070,GO:0016740,GO:0016741,GO:0032259,GO:0034641,GO:0036260,GO:0036261,GO:0043170,GO:0043412,GO:0043414,GO:0044237,GO:0044238,GO:0044260,GO:0046483,GO:0071164,GO:0071704,GO:0090304,GO:0140098,GO:1901360 - 0.00000000000000000000000000000000000000000000000000001491 194.0
DPH3_k127_10944558_5 CoA binding domain K06929 - - 0.000000000000000000000000000000000000000000000000005756 184.0
DPH3_k127_10944558_6 - - - - 0.0001206 54.0
DPH3_k127_11028357_0 Phosphoglucomutase/phosphomannomutase, C-terminal domain K01835 GO:0000271,GO:0003674,GO:0003824,GO:0004614,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005975,GO:0005976,GO:0005977,GO:0005978,GO:0005996,GO:0006006,GO:0006012,GO:0006073,GO:0006091,GO:0006112,GO:0008150,GO:0008152,GO:0009056,GO:0009058,GO:0009059,GO:0009250,GO:0009987,GO:0015980,GO:0016051,GO:0016052,GO:0016853,GO:0016866,GO:0016868,GO:0019318,GO:0019320,GO:0019388,GO:0033692,GO:0034637,GO:0034645,GO:0043170,GO:0044042,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044262,GO:0044264,GO:0044281,GO:0044282,GO:0044424,GO:0044444,GO:0044464,GO:0046365,GO:0055114,GO:0071704,GO:1901575,GO:1901576 5.4.2.2 5.267e-263 819.0
DPH3_k127_11028357_1 Beta-Casp domain K07576 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007282 549.0
DPH3_k127_11028357_2 acetylesterase activity K01066 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002444 337.0
DPH3_k127_11028357_3 PFAM regulatory protein, LysR K02019 - - 0.0000000000000000000000000000000000000001475 154.0
DPH3_k127_11028357_4 - - - - 0.0000000000000000000000000000000000001914 149.0
DPH3_k127_11059532_0 B12 binding domain - - - 7.265e-202 640.0
DPH3_k127_11059532_1 BadF BadG BcrA BcrD - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001227 419.0
DPH3_k127_11059532_3 3-demethylubiquinone-9 3-O-methyltransferase activity K07003 - - 0.0000000003617 63.0
DPH3_k127_11097050_0 Catalyzes the removal of elemental sulfur atoms from cysteine to produce alanine K01008,K04487 - 2.7.9.3,2.8.1.7 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001396 444.0
DPH3_k127_11097050_1 Catalyzes the transfer of a ribosyl phosphate group from 5-phosphoribose 1-diphosphate to orotate, leading to the formation of orotidine monophosphate (OMP) K00762 - 2.4.2.10 0.000000000000000000000000000000000000000000000000000000000000000000000000000000007619 273.0
DPH3_k127_11097050_3 - - - - 0.000000000000000000000000000000000316 136.0
DPH3_k127_11097050_4 Protein of unknown function (DUF4239) - - - 0.00000000000000000000000000000000691 138.0
DPH3_k127_11113050_0 D-Ala-D-Ala carboxypeptidase 3 (S13) family K07259 - 3.4.16.4 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002743 370.0
DPH3_k127_11113050_1 GyrI-like small molecule binding domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000001532 256.0
DPH3_k127_11113050_2 Cupin domain - - - 0.000000000000000000000000000000000000000002826 157.0
DPH3_k127_11203704_0 Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family K07787 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000092 617.0
DPH3_k127_11203704_1 NosL - - - 0.000000000000000000000000000000000000000000000000000000000001273 215.0
DPH3_k127_11230377_0 cellular water homeostasis K05802 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000005493 310.0
DPH3_k127_11230377_1 Histone deacetylase domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000258 284.0
DPH3_k127_11261021_0 pyruvate K01571,K01958,K01960 - 4.1.1.3,6.4.1.1 1.964e-252 785.0
DPH3_k127_11261021_1 Tyrosine recombinase XerD K03733,K04763 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004137 350.0
DPH3_k127_11261021_2 tRNA nucleotidyltransferase poly(A) polymerase K00974 - 2.7.7.72 0.000000000000000000000000000000000000000000000000002323 184.0
DPH3_k127_11262708_0 4Fe-4S ferredoxin iron-sulfur binding domain protein K03388 - 1.8.7.3,1.8.98.4,1.8.98.5,1.8.98.6 2.168e-195 615.0
DPH3_k127_11262708_1 PFAM methyl-viologen-reducing hydrogenase, delta subunit - - - 0.000000000000000000000000000000000000000000000000000000006346 203.0
DPH3_k127_11262708_2 Methyl-viologen-reducing hydrogenase, delta subunit K14127 - 1.8.98.5,1.8.98.6 0.00000000000000000000000000000000006008 134.0
DPH3_k127_11296427_0 Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family K07250 - 2.6.1.19,2.6.1.22 3.929e-207 651.0
DPH3_k127_11296427_1 PFAM sodium hydrogen exchanger - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004839 600.0
DPH3_k127_11296427_10 Protein of unknown function (DUF559) - - - 0.0000000000000000000000000000000002153 134.0
DPH3_k127_11296427_11 Histidine kinase K07641,K14980 - 2.7.13.3 0.00000000000000000000000000001431 119.0
DPH3_k127_11296427_2 HELICc2 K03722 - 3.6.4.12 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001631 353.0
DPH3_k127_11296427_3 Oxidoreductase family, NAD-binding Rossmann fold - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003805 356.0
DPH3_k127_11296427_4 lysyltransferase activity K07027 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001147 317.0
DPH3_k127_11296427_5 Belongs to the CDP-alcohol phosphatidyltransferase class-I family - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000006075 276.0
DPH3_k127_11296427_6 Catalyzes the formation of dTDP-glucose, from dTTP and glucose 1-phosphate, as well as its pyrophosphorolysis - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000001167 263.0
DPH3_k127_11296427_7 Haloacid dehalogenase-like hydrolase K07025 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000001532 263.0
DPH3_k127_11296427_8 Glutathione synthase Ribosomal protein S6 modification enzyme (Glutaminyl transferase) K03802,K05844 - 6.3.2.29,6.3.2.30 0.000000000000000000000000000000000000000000000000000000000000000001074 236.0
DPH3_k127_11296427_9 Sigma factor PP2C-like phosphatases K07315 - 3.1.3.3 0.00000000000000000000000000000000000004253 145.0
DPH3_k127_11306793_0 Mu-like prophage protein - - - 0.0000000000000000000000000000000000000001643 166.0
DPH3_k127_11306793_1 - - - - 0.0000000000000000000000000006599 125.0
DPH3_k127_11310665_0 Bidirectionally degrades single-stranded DNA into large acid-insoluble oligonucleotides, which are then degraded further into small acid-soluble oligonucleotides K03601 - 3.1.11.6 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008067 494.0
DPH3_k127_11310665_1 Belongs to the FPP GGPP synthase family K00795,K13789 - 2.5.1.1,2.5.1.10,2.5.1.29 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002365 449.0
DPH3_k127_11310665_2 PFAM Binding-protein-dependent transport system inner membrane component K02034 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001179 440.0
DPH3_k127_11310665_3 Catalyzes the acyloin condensation reaction between C atoms 2 and 3 of pyruvate and glyceraldehyde 3-phosphate to yield 1-deoxy-D-xylulose-5-phosphate (DXP) K01662 - 2.2.1.7 0.0000000000000000000000000000000000000000000000000000005053 197.0
DPH3_k127_11310665_4 Bidirectionally degrades single-stranded DNA into large acid-insoluble oligonucleotides, which are then degraded further into small acid-soluble oligonucleotides K03602 - 3.1.11.6 0.0000000000000000000006807 98.0
DPH3_k127_11342533_0 This protein is involved in the repair of mismatches in DNA. It is required for dam-dependent methyl-directed DNA mismatch repair. May act as a molecular matchmaker , a protein that promotes the formation of a stable complex between two or more DNA-binding proteins in an ATP-dependent manner without itself being part of a final effector complex K03572 GO:0003674,GO:0003676,GO:0003677,GO:0003697,GO:0003824,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0006139,GO:0006259,GO:0006281,GO:0006298,GO:0006725,GO:0006807,GO:0006950,GO:0006974,GO:0008150,GO:0008152,GO:0009987,GO:0016462,GO:0016787,GO:0016817,GO:0016818,GO:0016887,GO:0017111,GO:0032300,GO:0032991,GO:0033554,GO:0034641,GO:0043170,GO:0044237,GO:0044238,GO:0044260,GO:0044424,GO:0044464,GO:0046483,GO:0050896,GO:0051716,GO:0071704,GO:0090304,GO:0097159,GO:1901360,GO:1901363,GO:1990391 - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002591 425.0
DPH3_k127_11342533_1 GGDEF domain K11527 - 2.7.13.3 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001061 365.0
DPH3_k127_11342533_2 TIGRFAM cell shape determining protein, MreB Mrl family K03569 - - 0.0000000000000000000000000000000000000000000000002291 178.0
DPH3_k127_11393512_0 7TM-HD extracellular K07037 - - 1.018e-260 828.0
DPH3_k127_11393512_1 PhoH-like protein K06217 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000146 500.0
DPH3_k127_11393512_2 Catalyzes the complicated ring closure reaction between the two acyclic compounds 1-deoxy-D-xylulose-5-phosphate (DXP) and 3-amino-2-oxopropyl phosphate (1-amino-acetone-3-phosphate or AAP) to form pyridoxine 5'-phosphate (PNP) and inorganic phosphate K03474 GO:0003674,GO:0003824,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006725,GO:0006766,GO:0006767,GO:0006807,GO:0008150,GO:0008152,GO:0008614,GO:0008615,GO:0009058,GO:0009110,GO:0009987,GO:0016740,GO:0016769,GO:0017144,GO:0018130,GO:0019438,GO:0033856,GO:0034641,GO:0042364,GO:0042816,GO:0042819,GO:0044237,GO:0044249,GO:0044271,GO:0044281,GO:0044283,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0051186,GO:0051188,GO:0071704,GO:0072524,GO:0072525,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576,GO:1901615,GO:1901617 2.6.99.2 0.00000000000000000000000000000000000000000000000000000000000000000000005974 244.0
DPH3_k127_11393512_3 TIGRFAM MazG family protein K02499,K04765 - 3.6.1.9 0.0000000000000000000000000000000000000000000000000000000000775 210.0
DPH3_k127_11393512_4 PFAM Colicin V production protein K03558 - - 0.00000000000000000000000000000000000000000000003747 176.0
DPH3_k127_11393512_5 Single strand-specific metallo-endoribonuclease involved in late-stage 70S ribosome quality control and in maturation of the 3' terminus of the 16S rRNA K07042 - - 0.000000000000000000000000000000002876 134.0
DPH3_k127_11412014_0 Pyridine nucleotide-disulphide oxidoreductase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002425 566.0
DPH3_k127_11412014_1 PFAM Peptidase family S58 - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002743 421.0
DPH3_k127_11412014_2 4Fe-4S ferredoxin iron-sulfur binding domain protein - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003371 325.0
DPH3_k127_11412014_3 HD domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000001053 296.0
DPH3_k127_11412014_4 Methyl-viologen-reducing hydrogenase, delta subunit K14127 - 1.8.98.5,1.8.98.6 0.000000000000000000000008865 102.0
DPH3_k127_11412014_5 PFAM methyl-viologen-reducing hydrogenase delta subunit K14127 - 1.8.98.5,1.8.98.6 0.000000000000000001024 85.0
DPH3_k127_11412216_0 Iron-sulfur cluster-binding domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002362 450.0
DPH3_k127_11412216_1 Catalyzes the condensation reaction of fatty acid synthesis by the addition to an acyl acceptor of two carbons from malonyl-ACP K09458 - 2.3.1.179 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004207 354.0
DPH3_k127_11412216_2 ATP-grasp domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006659 332.0
DPH3_k127_11412216_3 PFAM Short-chain dehydrogenase reductase SDR K00059 - 1.1.1.100 0.0000000000000000000000000000000000000000000000000000000000000000003187 238.0
DPH3_k127_11412216_4 Glycosyl transferase family 2 - - - 0.000000000000000000000000000000000000000000000001458 182.0
DPH3_k127_11412216_5 3-oxoacyl-[acyl-carrier-protein] synthase activity K09458 - 2.3.1.179 0.0000000000000000000000001242 118.0
DPH3_k127_11412216_6 Thioesterase-like superfamily K07107 - - 0.0000000000000000000000001914 112.0
DPH3_k127_11412216_7 3-hydroxyoctanoyl-[acyl-carrier-protein] dehydratase activity K02372 - 4.2.1.59 0.0000000000000000000103 97.0
DPH3_k127_11412216_8 Phosphopantetheine attachment site K02078 - - 0.0000000000000000000345 94.0
DPH3_k127_11426994_0 Catalyzes the insertion of Co(2 ) into sirohydrochlorin K02190 GO:0003674,GO:0003824,GO:0004325,GO:0005488,GO:0005575,GO:0005623,GO:0008150,GO:0009987,GO:0016043,GO:0016829,GO:0016852,GO:0020037,GO:0022607,GO:0042597,GO:0043167,GO:0043169,GO:0043933,GO:0044085,GO:0044464,GO:0046872,GO:0046906,GO:0046914,GO:0048037,GO:0050897,GO:0051259,GO:0051262,GO:0051266,GO:0065003,GO:0071840,GO:0097159,GO:1901363 4.99.1.3 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003282 401.0
DPH3_k127_11443838_0 Iron-sulfur cluster-binding domain K06871 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002983 563.0
DPH3_k127_11443838_1 DsrE/DsrF/DrsH-like family - - - 0.0000000000000000000000000000000000007801 144.0
DPH3_k127_11443838_2 helix_turn_helix, Arsenical Resistance Operon Repressor - - - 0.000000000000000000000000007197 113.0
DPH3_k127_11487041_0 Insulinase (Peptidase family M16) K07263 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000001039 265.0
DPH3_k127_11517219_0 Saccharopine dehydrogenase C-terminal domain K00290 - 1.5.1.7 2.313e-217 679.0
DPH3_k127_11517219_1 two component, sigma54 specific, transcriptional regulator, Fis family K02481 - - 2.002e-211 666.0
DPH3_k127_11517219_10 Allophanate hydrolase subunit 2 - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006832 347.0
DPH3_k127_11517219_11 RNA pseudouridylate synthase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009999 327.0
DPH3_k127_11517219_12 Catalyzes the condensation of the acetyl group of acetyl-CoA with 3-methyl-2-oxobutanoate (2-oxoisovalerate) to form 3-carboxy-3-hydroxy-4-methylpentanoate (2-isopropylmalate) K01649 - 2.3.3.13 0.000000000000000000000000000000000000000000000000000000000000000000000000000000003571 281.0
DPH3_k127_11517219_13 Domain of unknown function (DUF4412) - - - 0.00000000000000000000000000000000000000000000000000000000000000001325 231.0
DPH3_k127_11517219_14 Carboxyltransferase domain, subdomain C and D K06351 - - 0.00000000000000000000000000000000000000000000000000000000000001291 222.0
DPH3_k127_11517219_15 diguanylate cyclase - - - 0.0000000000000000000000000000000000000000000005279 191.0
DPH3_k127_11517219_16 Dynamin family - - - 0.00000000000000000000000000000000000000000007026 171.0
DPH3_k127_11517219_17 regulatory protein, FmdB family - - - 0.00000000000000000000000000000000000000004087 154.0
DPH3_k127_11517219_18 - - - - 0.0000000000000000000000000000000000000001364 152.0
DPH3_k127_11517219_19 PFAM VanZ - - - 0.000000000000000006223 89.0
DPH3_k127_11517219_2 Receptor family ligand binding region K01999 - - 1.582e-202 638.0
DPH3_k127_11517219_3 PFAM MgsA AAA ATPase C terminal K07478 - - 3.886e-196 621.0
DPH3_k127_11517219_4 Signal transduction histidine kinase, nitrogen specific - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001865 609.0
DPH3_k127_11517219_5 Pyridoxal-dependent decarboxylase, C-terminal sheet domain K13747 - 4.1.1.96 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002635 591.0
DPH3_k127_11517219_7 Histidine kinase A domain protein - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006119 468.0
DPH3_k127_11517219_8 Dynamin family - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007494 398.0
DPH3_k127_11517219_9 Belongs to the UPF0271 (lamB) family K07160 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000144 356.0
DPH3_k127_11530234_0 Catalyzes the transfer of the enolpyruvyl moiety of phosphoenolpyruvate (PEP) to the 5-hydroxyl of shikimate-3- phosphate (S3P) to produce enolpyruvyl shikimate-3-phosphate and inorganic phosphate K00800 - 2.5.1.19 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001483 473.0
DPH3_k127_11530234_1 PFAM Prephenate dehydratase K14170 - 4.2.1.51,5.4.99.5 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000434 450.0
DPH3_k127_11530234_2 3-dehydroquinate synthase (EC 4.6.1.3) K11646 - 1.4.1.24 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002755 403.0
DPH3_k127_11530234_3 Involved in the biosynthesis of the chorismate, which leads to the biosynthesis of aromatic amino acids. Catalyzes the reversible NADPH linked reduction of 3-dehydroshikimate (DHSA) to yield shikimate (SA) K00014 - 1.1.1.25 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000001881 294.0
DPH3_k127_11530234_4 Involved in the third step of the chorismate pathway, which leads to the biosynthesis of aromatic amino acids. Catalyzes the cis-dehydration of 3-dehydroquinate (DHQ) and introduces the first double bond of the aromatic ring to yield 3- dehydroshikimate K03785 - 4.2.1.10 0.000000000000000000000000000000000000000000000000000000231 201.0
DPH3_k127_11530234_5 23S rRNA-intervening sequence protein - - - 0.00000000000001229 75.0
DPH3_k127_11530234_7 23S rRNA-intervening sequence protein - - - 0.000000000005925 70.0
DPH3_k127_11530234_8 PFAM peptidase S1 and S6, chymotrypsin Hap K04771 - 3.4.21.107 0.0000003306 54.0
DPH3_k127_11594039_0 Two component, sigma54 specific, transcriptional regulator, Fis family - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006319 582.0
DPH3_k127_11594039_1 Sporulation related domain - - - 0.00000112 61.0
DPH3_k127_11612885_0 Plays an important role in the de novo pathway of purine nucleotide biosynthesis. Catalyzes the first committed step in the biosynthesis of AMP from IMP K01939 GO:0003674,GO:0003824,GO:0004019,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006139,GO:0006163,GO:0006164,GO:0006167,GO:0006725,GO:0006753,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009117,GO:0009123,GO:0009124,GO:0009126,GO:0009127,GO:0009150,GO:0009152,GO:0009156,GO:0009161,GO:0009165,GO:0009167,GO:0009168,GO:0009259,GO:0009260,GO:0009987,GO:0016874,GO:0016879,GO:0017144,GO:0018130,GO:0019438,GO:0019637,GO:0019693,GO:0034641,GO:0034654,GO:0044208,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0044424,GO:0044464,GO:0046033,GO:0046040,GO:0046390,GO:0046483,GO:0055086,GO:0071704,GO:0072521,GO:0072522,GO:0090407,GO:1901135,GO:1901137,GO:1901293,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576 6.3.4.4 1.54e-203 641.0
DPH3_k127_11612885_1 SMART Metal-dependent phosphohydrolase, HD region - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001428 329.0
DPH3_k127_11612885_2 Fe-S cluster domain protein - - - 0.00000000000000000000000000000000000000000000000000004282 197.0
DPH3_k127_11612885_3 Serine aminopeptidase, S33 K06889,K07397 - - 0.00000000000000000000000000000000000005048 143.0
DPH3_k127_11612885_4 - - - - 0.0000000001614 62.0
DPH3_k127_11612885_5 Belongs to the small heat shock protein (HSP20) family K13993 - - 0.0000000001879 67.0
DPH3_k127_11641518_0 Catalyzes the attachment of alanine to tRNA(Ala) in a two-step reaction alanine is first activated by ATP to form Ala- AMP and then transferred to the acceptor end of tRNA(Ala). Also edits incorrectly charged Ser-tRNA(Ala) and Gly-tRNA(Ala) via its editing domain K01872 GO:0003674,GO:0003824,GO:0004812,GO:0004813,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006082,GO:0006139,GO:0006396,GO:0006399,GO:0006400,GO:0006412,GO:0006418,GO:0006419,GO:0006518,GO:0006520,GO:0006725,GO:0006807,GO:0008033,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009451,GO:0009987,GO:0010467,GO:0016070,GO:0016597,GO:0016874,GO:0016875,GO:0019538,GO:0019752,GO:0031406,GO:0034470,GO:0034641,GO:0034645,GO:0034660,GO:0036094,GO:0043038,GO:0043039,GO:0043043,GO:0043167,GO:0043168,GO:0043170,GO:0043177,GO:0043412,GO:0043436,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044281,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0071704,GO:0090304,GO:0140098,GO:0140101,GO:1901360,GO:1901564,GO:1901566,GO:1901576 6.1.1.7 0.0 1400.0
DPH3_k127_11641518_1 Can catalyze the hydrolysis of ATP in the presence of single-stranded DNA, the ATP-dependent uptake of single-stranded DNA by duplex DNA, and the ATP-dependent hybridization of homologous single-stranded DNAs. It interacts with LexA causing its activation and leading to its autocatalytic cleavage K03553 GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0044424,GO:0044444,GO:0044464 - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001601 518.0
DPH3_k127_11641518_2 Hydrolyzes RNA 2',3'-cyclic phosphodiester to an RNA 2'- phosphomonoester K01975 - 3.1.4.58 0.000000000000000000000000000000000000000000000000000000000001034 216.0
DPH3_k127_11641518_3 TIGRFAM competence damage-inducible protein CinA K03742,K03743 GO:0003674,GO:0003676,GO:0003677,GO:0005488,GO:0006139,GO:0006259,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0009987,GO:0034641,GO:0043170,GO:0044237,GO:0044238,GO:0044260,GO:0046483,GO:0071704,GO:0090304,GO:0097159,GO:1901360,GO:1901363 3.5.1.42 0.00000000000000000000000000000000000000000000000000005184 192.0
DPH3_k127_11641518_4 Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released K03086 - - 0.00000000000000000000000000000000000000000000000001124 188.0
DPH3_k127_11682084_0 Hydantoinase/oxoprolinase N-terminal region - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002577 591.0
DPH3_k127_11682084_1 - - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000007952 275.0
DPH3_k127_11682084_2 PFAM Rhomboid family K07059 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000003256 271.0
DPH3_k127_11701385_0 TIGRFAM Carbon-monoxide dehydrogenase, catalytic subunit K00198 - 1.2.7.4 0.0 1074.0
DPH3_k127_11701385_1 Pyridine nucleotide-disulphide oxidoreductase K03387 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006015 523.0
DPH3_k127_11701385_10 Branched-chain amino acid ATP-binding cassette transporter K01995,K01998 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000003583 265.0
DPH3_k127_11701385_11 AAA domain, putative AbiEii toxin, Type IV TA system K01996 - - 0.00000000000000000000000000000000000000000000000000000000000000000000001198 249.0
DPH3_k127_11701385_12 Rubrerythrin - - - 0.00000000000000000000000000000000000000000000000000000003262 200.0
DPH3_k127_11701385_13 lyase activity - - - 0.0000000000000000000000000000000000000000002214 167.0
DPH3_k127_11701385_14 Fatty acid hydroxylase superfamily - - - 0.0000000000000000000000000000000000000000004543 168.0
DPH3_k127_11701385_15 PBS lyase HEAT domain protein repeat-containing protein - - - 0.000000000000000000000000000000000001787 156.0
DPH3_k127_11701385_16 His Kinase A (phosphoacceptor) domain K02668,K07709 - 2.7.13.3 0.00000000000000000000000000000000002235 150.0
DPH3_k127_11701385_17 Rubredoxin - GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0044424,GO:0044464 - 0.00000000000000000000000035 105.0
DPH3_k127_11701385_18 4Fe-4S single cluster domain of Ferredoxin I K05337 - - 0.0000000000000000000006194 97.0
DPH3_k127_11701385_19 Branched-chain amino acid transport protein (AzlD) - - - 0.00000000000000000004149 92.0
DPH3_k127_11701385_2 response regulator - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002643 383.0
DPH3_k127_11701385_20 oxidoreductase K06940 - - 0.0000000000000003216 82.0
DPH3_k127_11701385_3 Receptor family ligand binding region K01999 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002116 375.0
DPH3_k127_11701385_4 Domain of unknown function (DUF1731) K07071 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001721 342.0
DPH3_k127_11701385_5 Phosphodiester glycosidase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000006079 294.0
DPH3_k127_11701385_6 ATPase, P-type (transporting), HAD superfamily, subfamily IC K17686 - 3.6.3.54 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000001476 287.0
DPH3_k127_11701385_7 Belongs to the binding-protein-dependent transport system permease family K01997 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000007151 281.0
DPH3_k127_11701385_8 diguanylate cyclase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000001705 284.0
DPH3_k127_11701385_9 Belongs to the binding-protein-dependent transport system permease family K01998 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000004496 269.0
DPH3_k127_11705062_0 Involved in the regulation of glutamine synthetase GlnA, a key enzyme in the process to assimilate ammonia. When cellular nitrogen levels are high, the C-terminal adenylyl transferase (AT) inactivates GlnA by covalent transfer of an adenylyl group from ATP to specific tyrosine residue of GlnA, thus reducing its activity. Conversely, when nitrogen levels are low, the N-terminal adenylyl removase (AR) activates GlnA by removing the adenylyl group by phosphorolysis, increasing its activity. The regulatory region of GlnE binds the signal transduction protein PII (GlnB) which indicates the nitrogen status of the cell K00982 - 2.7.7.42,2.7.7.89 3.929e-315 990.0
DPH3_k127_11705062_1 Glutamate synthase - - - 1.759e-215 681.0
DPH3_k127_11705062_2 GXGXG motif - - - 8.814e-199 628.0
DPH3_k127_11705062_3 Glutamine synthetase, catalytic domain K01915 - 6.3.1.2 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002134 570.0
DPH3_k127_11705062_4 glutamate synthase activity - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001384 495.0
DPH3_k127_11705062_5 Methyl-viologen-reducing hydrogenase, delta subunit - - - 0.00000000000000000153 90.0
DPH3_k127_11727190_0 PFAM Cysteine-rich domain K11473 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007287 322.0
DPH3_k127_11727190_1 - - - - 0.00000000000000000000000000000000000000007588 157.0
DPH3_k127_11727709_0 Putative outer membrane beta-barrel porin, MtrB/PioB - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009203 539.0
DPH3_k127_11727709_1 Cytochrome c554 and c-prime - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002012 407.0
DPH3_k127_11753848_0 The UvrABC repair system catalyzes the recognition and processing of DNA lesions. UvrC both incises the 5' and 3' sides of the lesion. The N-terminal half is responsible for the 3' incision and the C-terminal half is responsible for the 5' incision K03703 GO:0005575,GO:0005622,GO:0005623,GO:0006950,GO:0006974,GO:0008150,GO:0009380,GO:0009987,GO:0032991,GO:0033554,GO:0044424,GO:0044464,GO:0050896,GO:0051716,GO:1902494,GO:1905347,GO:1905348,GO:1990391 - 5.182e-243 766.0
DPH3_k127_11753848_1 Specifically methylates the cytosine at position 967 (m5C967) of 16S rRNA K03500 - 2.1.1.176 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002762 571.0
DPH3_k127_11753848_10 TIGRFAM HAD-superfamily hydrolase, subfamily IA, variant K01091 - 3.1.3.18 0.00000000000000000000001569 105.0
DPH3_k127_11753848_11 Recombinase - - - 0.000737 48.0
DPH3_k127_11753848_2 Pfam SEC-C motif - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001024 434.0
DPH3_k127_11753848_3 Attaches a formyl group to the free amino group of methionyl-tRNA(fMet). The formyl group appears to play a dual role in the initiator identity of N-formylmethionyl-tRNA by promoting its recognition by IF2 and preventing the misappropriation of this tRNA by the elongation apparatus K00604 GO:0003674,GO:0003824,GO:0004479,GO:0006139,GO:0006396,GO:0006399,GO:0006400,GO:0006412,GO:0006413,GO:0006464,GO:0006518,GO:0006725,GO:0006807,GO:0008033,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009451,GO:0009987,GO:0010467,GO:0016070,GO:0016740,GO:0016741,GO:0016742,GO:0019538,GO:0019988,GO:0034470,GO:0034641,GO:0034645,GO:0034660,GO:0036211,GO:0043043,GO:0043170,GO:0043412,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0046483,GO:0071704,GO:0071951,GO:0090304,GO:0140098,GO:0140101,GO:1901360,GO:1901564,GO:1901566,GO:1901576 2.1.2.9 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001003 377.0
DPH3_k127_11753848_4 Protein of unknown function DUF116 K09729 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007743 336.0
DPH3_k127_11753848_5 Tim44 - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000021 329.0
DPH3_k127_11753848_6 Ribulose-phosphate 3 epimerase family K01783 - 5.1.3.1 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000004219 299.0
DPH3_k127_11753848_8 TIGRFAM HAD-superfamily hydrolase, subfamily IA, variant 3 K01838 - 5.4.2.6 0.000000000000000000000000000000000000000000000000000000000000001391 226.0
DPH3_k127_11753848_9 Removes the formyl group from the N-terminal Met of newly synthesized proteins. Requires at least a dipeptide for an efficient rate of reaction. N-terminal L-methionine is a prerequisite for activity but the enzyme has broad specificity at other positions K01462 - 3.5.1.88 0.000000000000000000000000000000000000000000000000000000000000001876 224.0
DPH3_k127_11755622_0 His Kinase A (phosphoacceptor) domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001981 357.0
DPH3_k127_11755622_1 PFAM Rhomboid family - - - 0.000000000000000000000000000000000000000000000000000005125 196.0
DPH3_k127_11755622_2 BadF/BadG/BcrA/BcrD ATPase family - - - 0.000000000000000000000000001725 115.0
DPH3_k127_11764067_0 Catalyzes the specific phosphorylation of the 3-hydroxyl group of shikimic acid using ATP as a cosubstrate K00891 - 2.7.1.71 0.000000000000000000000000000000000000000000000000000001329 197.0
DPH3_k127_11764067_1 radical SAM domain protein - - - 0.000000000000000000000000009228 114.0
DPH3_k127_11772653_0 Transfers the fatty acyl group on membrane lipoproteins K03820 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003252 458.0
DPH3_k127_11772653_1 Belongs to the arginase family K01476,K01480 - 3.5.3.1,3.5.3.11 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003458 397.0
DPH3_k127_11772653_2 CBS domain containing protein K06189 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001312 372.0
DPH3_k127_11772653_3 Catalyzes the decarboxylation of S-adenosylmethionine to S-adenosylmethioninamine (dcAdoMet), the propylamine donor required for the synthesis of the polyamines spermine and spermidine from the diamine putrescine K01611 - 4.1.1.50 0.00000000000000000000000000000000000000000000000000000000000000000000000000003031 260.0
DPH3_k127_11772653_4 Helix-turn-helix domain - - - 0.0000000000000000000000000000000000000000000000000000000000004968 215.0
DPH3_k127_11810040_0 that it carries out the mismatch recognition step. This protein has a weak ATPase activity K03555 GO:0003674,GO:0003676,GO:0003677,GO:0003684,GO:0003690,GO:0003824,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0006139,GO:0006259,GO:0006281,GO:0006298,GO:0006725,GO:0006807,GO:0006950,GO:0006974,GO:0008094,GO:0008150,GO:0008152,GO:0009987,GO:0016462,GO:0016787,GO:0016817,GO:0016818,GO:0016887,GO:0017111,GO:0030983,GO:0032300,GO:0032991,GO:0033554,GO:0034641,GO:0042623,GO:0043170,GO:0044237,GO:0044238,GO:0044260,GO:0044424,GO:0044464,GO:0046483,GO:0050896,GO:0051716,GO:0071704,GO:0090304,GO:0097159,GO:1901360,GO:1901363,GO:1990391 - 2.278e-266 847.0
DPH3_k127_11810040_1 RNB K01147,K12573 - 3.1.13.1 3.871e-221 705.0
DPH3_k127_11810040_2 SMART serine threonine protein kinase K08884,K12132 - 2.7.11.1 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009416 419.0
DPH3_k127_11810040_3 Ami_3 K01448 - 3.5.1.28 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001036 341.0
DPH3_k127_11810040_4 Calcineurin-like phosphoesterase superfamily domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000007752 293.0
DPH3_k127_11844785_0 Catalyzes amidations at positions B, D, E, and G on adenosylcobyrinic A,C-diamide. NH(2) groups are provided by glutamine, and one molecule of ATP is hydrogenolyzed for each amidation K02232 - 6.3.5.10 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001716 516.0
DPH3_k127_11844785_1 Catalyzes the ATP-dependent amidation of the two carboxylate groups at positions a and c of cobyrinate, using either L-glutamine or ammonia as the nitrogen source K02224 - 6.3.5.11,6.3.5.9 0.000000000000000000000000000000000000000000000000000000000000000000000000000005581 270.0
DPH3_k127_11849639_0 Belongs to the aldehyde dehydrogenase family K00294 - 1.2.1.88 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002043 472.0
DPH3_k127_11849639_1 Histidine kinase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000316 324.0
DPH3_k127_11849639_2 helix_turn_helix, Lux Regulon K02479 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000004796 291.0
DPH3_k127_11849639_3 response regulator K02485 - - 0.00000000000000000000000000000000000001807 147.0
DPH3_k127_11849639_4 MEDS: MEthanogen/methylotroph, DcmR Sensory domain - - - 0.0000000000000000000000004843 113.0
DPH3_k127_11849639_5 Cyclic nucleotide-monophosphate binding domain - - - 0.00000000000000003073 88.0
DPH3_k127_11849639_6 - - - - 0.00003641 51.0
DPH3_k127_11886583_0 PFAM Cytochrome c, bacterial - - - 7.682e-297 926.0
DPH3_k127_11886583_1 Sigma-54 factor interaction domain-containing protein K02481,K07712,K07713 - - 2.862e-264 843.0
DPH3_k127_11886583_2 Thiol-specific peroxidase that catalyzes the reduction of hydrogen peroxide and organic hydroperoxides to water and alcohols, respectively. Plays a role in cell protection against oxidative stress by detoxifying peroxides K03386 - 1.11.1.15 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006922 340.0
DPH3_k127_11886583_3 Polysulphide reductase, NrfD - - - 0.00000000000000000000000000000000000000000000000000000000000001422 218.0
DPH3_k127_11886583_4 phosphorelay signal transduction system - - - 0.0001491 49.0
DPH3_k127_1194604_0 TIGRFAM succinate dehydrogenase or fumarate reductase, flavoprotein K00239,K00244 - 1.3.5.1,1.3.5.4 2.435e-232 724.0
DPH3_k127_1194604_1 TIGRFAM chromate transporter, chromate ion transporter (CHR) family K07240 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005442 507.0
DPH3_k127_1194604_2 TIGRFAM succinate dehydrogenase and fumarate reductase iron-sulfur protein K00240,K00245 - 1.3.5.1,1.3.5.4 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000114 421.0
DPH3_k127_1194604_3 Rhodanese Homology Domain - - - 0.00000000000000000000000000000000002325 140.0
DPH3_k127_1194604_4 PFAM Major Facilitator Superfamily - - - 0.000000000000000001469 85.0
DPH3_k127_11950844_0 MotA/TolQ/ExbB proton channel family K02556 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001078 342.0
DPH3_k127_11950844_1 Catalyzes the activation of phenylacetic acid (PA) to phenylacetyl-CoA (PA-CoA) K01912 - 6.2.1.30 0.0000000000000000000000000000000000000000000000000008283 186.0
DPH3_k127_11950844_2 Membrane MotB of proton-channel complex MotA/MotB K02557 - - 0.0000000000000000000000000414 113.0
DPH3_k127_11950844_3 - - - - 0.0008753 49.0
DPH3_k127_11954011_0 NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient K00333,K13378,K13380 GO:0003674,GO:0003824,GO:0003954,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005886,GO:0006091,GO:0006119,GO:0006120,GO:0006139,GO:0006163,GO:0006725,GO:0006753,GO:0006793,GO:0006796,GO:0006807,GO:0008137,GO:0008150,GO:0008152,GO:0009117,GO:0009123,GO:0009126,GO:0009141,GO:0009144,GO:0009150,GO:0009161,GO:0009167,GO:0009199,GO:0009205,GO:0009259,GO:0009987,GO:0015980,GO:0016020,GO:0016310,GO:0016491,GO:0016651,GO:0016655,GO:0017144,GO:0019637,GO:0019693,GO:0022900,GO:0022904,GO:0034641,GO:0042773,GO:0042775,GO:0044237,GO:0044238,GO:0044281,GO:0044424,GO:0044464,GO:0045333,GO:0046034,GO:0046483,GO:0050136,GO:0055086,GO:0055114,GO:0071704,GO:0071944,GO:0072521,GO:1901135,GO:1901360,GO:1901564 1.6.5.3 0.0 1193.0
DPH3_k127_11954011_1 Respiratory-chain NADH dehydrogenase domain 51 kDa subunit K00334,K00335 - 1.6.5.3 8.445e-211 661.0
DPH3_k127_11954011_2 TIGRFAM NADH-quinone oxidoreductase, chain G K00336 - 1.6.5.3 0.0000000000000000000000000000000000000000000000000000000000000000000000000000005075 265.0
DPH3_k127_11954011_3 Thioredoxin-like [2Fe-2S] ferredoxin K00334 - 1.6.5.3 0.00000000000000000000000000000000000000000000000000000000003728 211.0
DPH3_k127_11996299_0 Rhodopirellula transposase DDE domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003599 419.0
DPH3_k127_11996299_1 Rhodopirellula transposase DDE domain - - - 0.0004035 45.0
DPH3_k127_12013073_0 Peptidase family M48 - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001992 426.0
DPH3_k127_12013073_1 Functions as a ribosomal silencing factor. Interacts with ribosomal protein L14 (rplN), blocking formation of intersubunit bridge B8. Prevents association of the 30S and 50S ribosomal subunits and the formation of functional ribosomes, thus repressing translation K09710 - - 0.0000000000000000000000000000000000000000000007102 169.0
DPH3_k127_12013073_2 LexA-binding, inner membrane-associated putative hydrolase K07038 - - 0.00000000000000000000000000000000000002922 154.0
DPH3_k127_12017128_0 Allows the formation of correctly charged Gln-tRNA(Gln) through the transamidation of misacylated Glu-tRNA(Gln) in organisms which lack glutaminyl-tRNA synthetase. The reaction takes place in the presence of glutamine and ATP through an activated gamma-phospho-Glu-tRNA(Gln) K02433 - 6.3.5.6,6.3.5.7 2.707e-227 713.0
DPH3_k127_12017128_1 Catalyzes the synthesis of ADP-glucose, a sugar donor used in elongation reactions on alpha-glucans K00975 - 2.7.7.27 2.773e-227 709.0
DPH3_k127_12017128_2 PFAM Extracellular ligand-binding receptor K07121 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001347 516.0
DPH3_k127_12017128_3 Cytochrome C biogenesis protein transmembrane region K04084 - 1.8.1.8 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001555 318.0
DPH3_k127_12017128_4 Involved in DNA repair and RecF pathway recombination K03584 - - 0.0000000000000000000000000000000000000000000000000000000000001428 222.0
DPH3_k127_12017128_5 peroxiredoxin activity - - - 0.00000000000000000000000000000000000000000006207 166.0
DPH3_k127_12017128_6 Allows the formation of correctly charged Asn-tRNA(Asn) or Gln-tRNA(Gln) through the transamidation of misacylated Asp- tRNA(Asn) or Glu-tRNA(Gln) in organisms which lack either or both of asparaginyl-tRNA or glutaminyl-tRNA synthetases. The reaction takes place in the presence of glutamine and ATP through an activated phospho-Asp-tRNA(Asn) or phospho-Glu-tRNA(Gln) K02435 - 6.3.5.6,6.3.5.7 0.000000000000000000000000003919 116.0
DPH3_k127_12017128_7 Heat shock 70 kDa protein K04043 - - 0.000000000000000000005552 94.0
DPH3_k127_12017128_8 sequence-specific DNA binding K15539 - - 0.00000000002488 66.0
DPH3_k127_12041282_0 Catalyzes the reduction of nitrite to ammonia, consuming six electrons in the process K03385 - 1.7.2.2 8.14e-212 668.0
DPH3_k127_12041282_1 Part of the Sec protein translocase complex. Interacts with the SecYEG preprotein conducting channel. SecDF uses the proton motive force (PMF) to complete protein translocation after the ATP-dependent function of SecA K03072,K12257 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003576 576.0
DPH3_k127_12041282_2 Part of the Sec protein translocase complex. Interacts with the SecYEG preprotein conducting channel. SecDF uses the proton motive force (PMF) to complete protein translocation after the ATP-dependent function of SecA K03074 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006029 398.0
DPH3_k127_12041282_3 cytochrome c nitrate reductase, small subunit K15876 - - 0.0000000000000000000000000000000000000000000000000000001206 198.0
DPH3_k127_12041282_4 TIGRFAM preprotein translocase, YajC subunit K03210 - - 0.00000000000000000000000000000000006379 136.0
DPH3_k127_12041282_5 Transfers the gamma-phosphate of ATP to the 4'-position of a tetraacyldisaccharide 1-phosphate intermediate (termed DS-1- P) to form tetraacyldisaccharide 1,4'-bis-phosphate (lipid IVA) K00912 - 2.7.1.130 0.0000000000000000000000000000006143 128.0
DPH3_k127_12041282_6 Response regulator containing a CheY-like receiver domain and a GGDEF domain K02488 GO:0003674,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0042802,GO:0044424,GO:0044464 2.7.7.65 0.00000000008467 65.0
DPH3_k127_12093206_0 NUDIX domain K03575 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000132 426.0
DPH3_k127_12093206_1 Catalyzes the conversion of epoxyqueuosine (oQ) to queuosine (Q), which is a hypermodified base found in the wobble positions of tRNA(Asp), tRNA(Asn), tRNA(His) and tRNA(Tyr) - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001181 329.0
DPH3_k127_12093206_2 4-amino-4-deoxy-L-arabinose transferase and related glycosyltransferases of PMT family - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001751 327.0
DPH3_k127_12093206_3 ATPases associated with a variety of cellular activities K02003 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000005371 255.0
DPH3_k127_12093206_4 Glyoxalase-like domain K07032 - - 0.000000000000000000000000000000000000000000000000000000002386 203.0
DPH3_k127_12093206_5 - - - - 0.00000000000000000000000000000000000000008388 156.0
DPH3_k127_12093206_6 MacB-like periplasmic core domain - - - 0.00000000000000000000000000000000000003713 160.0
DPH3_k127_12093206_7 MacB-like periplasmic core domain - - - 0.0000000000000000001999 96.0
DPH3_k127_12093206_8 - - - - 0.0000000000000000003355 101.0
DPH3_k127_12093206_9 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) - - - 0.00000000001249 68.0
DPH3_k127_12102268_0 Protein tyrosine kinase K12132 - 2.7.11.1 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000003051 318.0
DPH3_k127_12102268_1 Inner membrane component of T3SS, cytoplasmic domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000001784 248.0
DPH3_k127_12102268_2 Serine/threonine phosphatases, family 2C, catalytic domain K01090,K20074 - 3.1.3.16 0.000000000000000000000000000000000000000000000003944 178.0
DPH3_k127_12102268_3 positive regulation of growth rate - - - 0.0000001096 60.0
DPH3_k127_12132867_0 cysteine-type peptidase activity - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001046 341.0
DPH3_k127_12132867_1 ADP-glyceromanno-heptose 6-epimerase activity K00754,K08678,K13613 - 4.1.1.35 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000006418 295.0
DPH3_k127_12132867_2 Catalyzes the NADPH-dependent reduction of ketopantoate into pantoic acid K00077 - 1.1.1.169 0.0001312 47.0
DPH3_k127_12147024_0 Adenylyl- / guanylyl cyclase, catalytic domain K01768 - 4.6.1.1 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001031 563.0
DPH3_k127_12147024_1 Cupin domain - - - 0.0005346 44.0
DPH3_k127_12148367_0 Methyl-viologen-reducing hydrogenase, delta subunit K16886 - - 0.0 1140.0
DPH3_k127_12148367_1 Belongs to the sulfate adenylyltransferase family K00958,K13811 - 2.7.1.25,2.7.7.4 1.161e-250 777.0
DPH3_k127_12148367_2 Cysteine-rich domain - - - 6.238e-208 651.0
DPH3_k127_12148367_3 FAD dependent oxidoreductase K16885 - - 9.097e-196 618.0
DPH3_k127_12148367_4 adenylylsulfate reductase alpha subunit K00394 - 1.8.99.2 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002495 340.0
DPH3_k127_12148367_5 reductase beta subunit K00395 - 1.8.99.2 0.000000000000000000000000000000000000000000000000000000000000000001716 229.0
DPH3_k127_12163008_0 signal transduction protein containing EAL and modified HD-GYP - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007224 334.0
DPH3_k127_12163008_1 Bacterial Type VI secretion, VC_A0110, EvfL, ImpJ, VasE K11893 - - 0.0000000000000000000000000000000000000000000000000000000000000000003573 233.0
DPH3_k127_12163008_2 - - - - 0.00000000000000000000000000000000000000000000000000000000009398 228.0
DPH3_k127_12163008_3 - - - - 0.000000000000000000000000000000000000000000007083 171.0
DPH3_k127_12163008_4 Type VI secretion lipoprotein, VasD, EvfM, TssJ, VC_A0113 - - - 0.0000000000000000000000000000000000001044 148.0
DPH3_k127_12163008_5 PFAM hydrogenase expression formation protein (HUPF HYPC) K04653 - - 0.000000000000000000000000277 106.0
DPH3_k127_12163008_6 Fructose-bisphosphate aldolase class-II K01624 - 4.1.2.13 0.00000000000000000001321 98.0
DPH3_k127_12166326_0 Type I phosphodiesterase / nucleotide pyrophosphatase - - - 3.967e-220 692.0
DPH3_k127_12166326_1 COG0790 FOG TPR repeat, SEL1 subfamily K07126 - - 0.000000000000000000000000000000000000000000000000000000000001385 214.0
DPH3_k127_12166326_2 Type I phosphodiesterase / nucleotide pyrophosphatase - - - 0.000000000000000000000000000000000000000000000000000000000001932 212.0
DPH3_k127_12166348_0 Mur ligase family, catalytic domain K02558 - 6.3.2.45 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006527 579.0
DPH3_k127_12166348_1 Catalyzes the phosphorylation of pantothenate (Pan), the first step in CoA biosynthesis K03525 - 2.7.1.33 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003093 392.0
DPH3_k127_12166348_2 Beta-lactamase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001162 338.0
DPH3_k127_12166348_3 LD-carboxypeptidase K01297 - 3.4.17.13 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003704 323.0
DPH3_k127_12166348_4 Catalyzes the conversion of epoxyqueuosine (oQ) to queuosine (Q), which is a hypermodified base found in the wobble positions of tRNA(Asp), tRNA(Asn), tRNA(His) and tRNA(Tyr) K09765 - 1.17.99.6 0.00000000000000000000000000000000000000000000000000000000000000000000000000139 258.0
DPH3_k127_12172182_0 Pyridine nucleotide-disulphide oxidoreductase K00123 - 1.17.1.9 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001286 591.0
DPH3_k127_12172182_1 Xylose isomerase-like TIM barrel - - - 0.00000000000000000000000000000000000000000000001186 182.0
DPH3_k127_12250499_0 Binds and transfers iron-sulfur (Fe-S) clusters to target apoproteins. Can hydrolyze ATP - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001749 377.0
DPH3_k127_12250499_1 Elongator protein 3, MiaB family, Radical SAM - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002718 338.0
DPH3_k127_12250499_2 Dimerisation domain of Zinc Transporter - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000007399 306.0
DPH3_k127_12250499_3 - - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000005316 268.0
DPH3_k127_12250499_4 CGGC - - - 0.000000000000000000000000000000000000000000000000000000007763 199.0
DPH3_k127_12250499_5 Belongs to the UPF0251 family - - - 0.00005155 48.0
DPH3_k127_12283422_0 PFAM Aminotransferase class I and II K10206,K14261 - 2.6.1.83 2.282e-221 691.0
DPH3_k127_12283422_1 PFAM Homoserine dehydrogenase K00003 - 1.1.1.3 1.626e-203 643.0
DPH3_k127_12283422_2 Proposed homoserine kinase K15635 - 5.4.2.12 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008346 527.0
DPH3_k127_12283422_3 PFAM AIR synthase related protein K01933 - 6.3.3.1 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001968 509.0
DPH3_k127_12283422_4 TIGRFAM Phosphoribosylformimino-5-aminoimidazole carboxamide ribotide isomerase K01814 GO:0000105,GO:0000162,GO:0003674,GO:0003824,GO:0003949,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006082,GO:0006520,GO:0006547,GO:0006568,GO:0006576,GO:0006586,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0008652,GO:0009058,GO:0009072,GO:0009073,GO:0009308,GO:0009309,GO:0009987,GO:0016053,GO:0016853,GO:0016860,GO:0016861,GO:0018130,GO:0019438,GO:0019752,GO:0034641,GO:0042401,GO:0042430,GO:0042435,GO:0043436,GO:0044106,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0044283,GO:0044424,GO:0044464,GO:0046219,GO:0046394,GO:0046483,GO:0052803,GO:0071704,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576,GO:1901605,GO:1901607 5.3.1.16 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000443 336.0
DPH3_k127_12283422_5 Thioesterase-like superfamily K07107 - - 0.00000000000000000000000000000000000000000000000000000001586 201.0
DPH3_k127_12283422_6 RNA polymerase that catalyzes the synthesis of short RNA molecules used as primers for DNA polymerase during DNA replication K02316 - - 0.000000000000000000000000000000000000000000000000002133 186.0
DPH3_k127_12283422_7 Bacterial extracellular solute-binding protein K05772 - - 0.00000008619 54.0
DPH3_k127_12283422_8 Belongs to the prokaryotic molybdopterin-containing oxidoreductase family K00123,K05299 - 1.17.1.10,1.17.1.9 0.00001206 47.0
DPH3_k127_12285001_0 TIGRFAM cell shape determining protein, MreB Mrl family K03569 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000354 521.0
DPH3_k127_12285001_1 Domain in cystathionine beta-synthase and other proteins. K04767 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001036 312.0
DPH3_k127_12285001_2 Required for both de novo synthesis of the corrin ring for the assimilation of exogenous corrinoids. Participates in the adenosylation of a variety of incomplete and complete corrinoids K19221 - 2.5.1.17 0.000000000000000000000000000000000000000000000000000000000000000001493 232.0
DPH3_k127_12285001_3 Inositol monophosphatase family K01092 GO:0003674,GO:0003824,GO:0005975,GO:0006020,GO:0006066,GO:0006793,GO:0006796,GO:0007154,GO:0007165,GO:0008150,GO:0008152,GO:0008934,GO:0009056,GO:0009987,GO:0016311,GO:0016787,GO:0016788,GO:0016791,GO:0019637,GO:0019751,GO:0023052,GO:0042578,GO:0043647,GO:0044237,GO:0044238,GO:0044262,GO:0044281,GO:0044282,GO:0046164,GO:0046174,GO:0046434,GO:0046838,GO:0046855,GO:0050789,GO:0050794,GO:0050896,GO:0051716,GO:0052745,GO:0052834,GO:0065007,GO:0071545,GO:0071704,GO:1901575,GO:1901615,GO:1901616 3.1.3.25 0.000000000000000000000000000000000000000000000000000000000000001107 227.0
DPH3_k127_12285001_4 - - - - 0.0000000000000000000000000000000000000000000000000000000000003624 219.0
DPH3_k127_12285001_5 2Fe-2S iron-sulfur cluster binding domain - - - 0.000000000000000000000000000000000000000000000000000000001007 209.0
DPH3_k127_12285001_6 deaminated base DNA N-glycosylase activity K21929 - 3.2.2.27 0.000000000000000000000000000000000000000000005491 170.0
DPH3_k127_1230671_0 DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates K03046 - 2.7.7.6 0.0 2185.0
DPH3_k127_1230671_1 One of the primary rRNA binding proteins, it binds directly to 16S rRNA where it nucleates assembly of the head domain of the 30S subunit. Is located at the subunit interface close to the decoding center, probably blocks exit of the E-site tRNA K02992 GO:0000028,GO:0003674,GO:0003676,GO:0003723,GO:0003729,GO:0003735,GO:0005198,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0006412,GO:0006518,GO:0006807,GO:0006996,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0015935,GO:0016043,GO:0019538,GO:0019843,GO:0022607,GO:0022613,GO:0022618,GO:0022626,GO:0022627,GO:0032991,GO:0034622,GO:0034641,GO:0034645,GO:0042254,GO:0042255,GO:0042274,GO:0043043,GO:0043170,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043603,GO:0043604,GO:0043933,GO:0044085,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:0065003,GO:0070925,GO:0071704,GO:0071826,GO:0071840,GO:0097159,GO:1901363,GO:1901564,GO:1901566,GO:1901576,GO:1990904 - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000004112 269.0
DPH3_k127_1230671_2 Interacts with and stabilizes bases of the 16S rRNA that are involved in tRNA selection in the A site and with the mRNA backbone. Located at the interface of the 30S and 50S subunits, it traverses the body of the 30S subunit contacting proteins on the other side and probably holding the rRNA structure together. The combined cluster of proteins S8, S12 and S17 appears to hold together the shoulder and platform of the 30S subunit K02950 - - 0.0000000000000000000000000000000000000000000000000000000000000000000004114 240.0
DPH3_k127_1230671_3 This protein promotes the GTP-dependent binding of aminoacyl-tRNA to the A-site of ribosomes during protein biosynthesis K02358 - - 0.0000000000000003869 78.0
DPH3_k127_12320356_0 Phosphorylase is an important allosteric enzyme in carbohydrate metabolism. Enzymes from different sources differ in their regulatory mechanisms and in their natural substrates. However, all known phosphorylases share catalytic and structural properties K00688 - 2.4.1.1 1.187e-215 672.0
DPH3_k127_12320356_1 Catalyzes the formation of pyruvate and glyoxylate from 4-hydroxy-2-oxoglutarate K01625 GO:0003674,GO:0003824,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0008675,GO:0008700,GO:0008948,GO:0016829,GO:0016830,GO:0016831,GO:0016832,GO:0016833,GO:0042802,GO:0044424,GO:0044444,GO:0044464,GO:0106009 4.1.2.14,4.1.3.42 0.0000000000000000000000000000000000000000000000000000000000000000000000000006755 258.0
DPH3_k127_12327283_0 TIGRFAM molybdenum cofactor synthesis domain K03750,K07219 - 2.10.1.1 1.609e-292 909.0
DPH3_k127_12327283_1 hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001039 444.0
DPH3_k127_12327283_10 peptidyl-tyrosine sulfation - - - 0.000000000000000000000000000003966 128.0
DPH3_k127_12327283_11 Protein-L-isoaspartate(D-aspartate) O-methyltransferase (PCMT) K07755 - 2.1.1.137 0.0000000000000000000002547 106.0
DPH3_k127_12327283_12 Glycosyl transferase family 21 K19003 - 2.4.1.336 0.00000000000000001225 87.0
DPH3_k127_12327283_14 PFAM Antibiotic biosynthesis monooxygenase - - - 0.000000000000001359 78.0
DPH3_k127_12327283_2 AI-2E family transporter - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000122 419.0
DPH3_k127_12327283_3 pfam abc K09691 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006663 301.0
DPH3_k127_12327283_4 PFAM pyruvate ferredoxin flavodoxin oxidoreductase K00172 - 1.2.7.1 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000005876 279.0
DPH3_k127_12327283_5 PFAM Endonuclease Exonuclease phosphatase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000001978 283.0
DPH3_k127_12327283_6 PFAM MgtC SapB transporter K07507 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000006023 265.0
DPH3_k127_12327283_7 Transport permease protein K09688,K09690 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000001067 259.0
DPH3_k127_12327283_8 Catalyzes the synthesis of activated sulfate K00860,K00955,K00958 - 2.7.1.25,2.7.7.4 0.000000000000000000000000000000000000000000000000000000000000003834 225.0
DPH3_k127_12327283_9 4Fe-4S binding domain K00171 - 1.2.7.1 0.00000000000000000000000000000000000000000000000006837 178.0
DPH3_k127_12339288_0 Response regulator receiver - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001222 551.0
DPH3_k127_12339288_1 PFAM AMP-dependent synthetase and ligase K01897 - 6.2.1.3 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007652 532.0
DPH3_k127_12339288_2 Branched-chain amino acid ATP-binding cassette transporter K01995 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002474 408.0
DPH3_k127_12339288_3 domain protein K13735 - - 0.000000000000000000000000000009936 130.0
DPH3_k127_12341005_0 Belongs to the NiFe NiFeSe hydrogenase large subunit family K00437,K00533 GO:0005575,GO:0005623,GO:0042597,GO:0044464 1.12.2.1,1.12.7.2 5.546e-304 937.0
DPH3_k127_12341005_1 Hydrogenase maturation protease K03605 - - 0.00000000000000000000000000000000000000000000000000000000006745 209.0
DPH3_k127_12341005_2 Hydrogenase (NiFe) small subunit HydA K00534,K06282,K18008 GO:0005575,GO:0005623,GO:0042597,GO:0044464 1.12.2.1,1.12.7.2,1.12.99.6 0.0000000000000003445 77.0
DPH3_k127_12347847_0 PFAM Thiamine pyrophosphate K00170 - 1.2.7.1 0.000002889 61.0
DPH3_k127_12374970_0 SH3 domain (SH3b1 type) - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000034 449.0
DPH3_k127_12374970_1 Nitroreductase family - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000001358 264.0
DPH3_k127_12388877_0 PFAM Glycosyl transferase, family 39 - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002067 598.0
DPH3_k127_12388877_1 Catalyzes the oxidation of 5,10- methylenetetrahydrofolate to 5,10-methenyltetrahydrofolate and then the hydrolysis of 5,10-methenyltetrahydrofolate to 10- formyltetrahydrofolate K01491 - 1.5.1.5,3.5.4.9 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002653 517.0
DPH3_k127_12388877_2 Trypsin - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007676 467.0
DPH3_k127_12388877_3 Serine aminopeptidase, S33 K06889,K07397 - - 0.00000000000000000000000000000000000000000000000000000000000000000006265 239.0
DPH3_k127_12388877_4 BPG-independent PGAM N-terminus (iPGM_N) K15633 - 5.4.2.12 0.000000000000000000000000000000000000000000000000000000000000000269 224.0
DPH3_k127_12388877_5 PFAM Formate--tetrahydrofolate ligase K01938 - 6.3.4.3 0.0000000000000002149 78.0
DPH3_k127_12441416_0 4Fe-4S dicluster domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004159 472.0
DPH3_k127_12441416_1 FAD linked oxidase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008269 368.0
DPH3_k127_12441416_2 signal-transduction protein with CBS domains - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001303 338.0
DPH3_k127_12441416_3 Domain in cystathionine beta-synthase and other proteins. - - - 0.000000000000000000000000000000000000000000000000092 179.0
DPH3_k127_12454308_0 PASTA domain K03587 - 3.4.16.4 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000015 452.0
DPH3_k127_12454308_1 Specifically methylates the N4 position of cytidine in position 1402 (C1402) of 16S rRNA K03438 GO:0000154,GO:0001510,GO:0003674,GO:0003824,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006139,GO:0006364,GO:0006396,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0008168,GO:0008170,GO:0008173,GO:0008649,GO:0008757,GO:0009451,GO:0009987,GO:0010467,GO:0016070,GO:0016072,GO:0016434,GO:0016740,GO:0016741,GO:0022613,GO:0031167,GO:0032259,GO:0034470,GO:0034641,GO:0034660,GO:0042254,GO:0043170,GO:0043412,GO:0043414,GO:0044085,GO:0044237,GO:0044238,GO:0044260,GO:0044424,GO:0044464,GO:0046483,GO:0070475,GO:0071424,GO:0071704,GO:0071840,GO:0090304,GO:0140098,GO:0140102,GO:1901360 2.1.1.199 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004663 404.0
DPH3_k127_12454308_3 transcription regulator activity K03925 GO:0000976,GO:0001067,GO:0003674,GO:0003676,GO:0003677,GO:0003690,GO:0003700,GO:0005488,GO:0006355,GO:0008150,GO:0009889,GO:0009890,GO:0009892,GO:0010468,GO:0010556,GO:0010558,GO:0010605,GO:0010629,GO:0019219,GO:0019222,GO:0031323,GO:0031324,GO:0031326,GO:0031327,GO:0031333,GO:0043254,GO:0043565,GO:0044087,GO:0044212,GO:0045892,GO:0045934,GO:0048519,GO:0048523,GO:0050789,GO:0050794,GO:0051128,GO:0051129,GO:0051171,GO:0051172,GO:0051252,GO:0051253,GO:0060255,GO:0065007,GO:0080090,GO:0097159,GO:0140110,GO:1901363,GO:1902679,GO:1903506,GO:1903507,GO:1990837,GO:2000112,GO:2000113,GO:2000142,GO:2000143,GO:2001141 - 0.000005121 49.0
DPH3_k127_12510259_0 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain K00134 - 1.2.1.12 4.886e-208 659.0
DPH3_k127_12510259_1 Belongs to the glyceraldehyde-3-phosphate dehydrogenase family K00134 - 1.2.1.12 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008628 522.0
DPH3_k127_12510259_2 Belongs to the phosphoglycerate kinase family K00927 - 2.7.2.3 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000301 496.0
DPH3_k127_12510259_3 Involved in the gluconeogenesis. Catalyzes stereospecifically the conversion of dihydroxyacetone phosphate (DHAP) to D-glyceraldehyde-3-phosphate (G3P) K01803 - 5.3.1.1 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002331 339.0
DPH3_k127_12510259_4 Pyruvate phosphate dikinase, PEP/pyruvate binding domain K01006 - 2.7.9.1 0.00000000000000000000000000000000000000004313 153.0
DPH3_k127_12510259_5 Preprotein translocase SecG subunit K03075 - - 0.000000000000000000000000000000007541 133.0
DPH3_k127_12510259_6 Belongs to the 'phage' integrase family K14059 - - 0.00000000000000002839 82.0
DPH3_k127_1252892_0 His Kinase A (phosphoacceptor) domain - - - 3.188e-219 701.0
DPH3_k127_1252892_1 SMART protein phosphatase 2C domain protein K07315 - 3.1.3.3 0.00000000000000000006071 94.0
DPH3_k127_1252892_2 STAS domain K04749,K06378 - - 0.00001324 51.0
DPH3_k127_12543638_0 Involved in lipid A export and possibly also in glycerophospholipid export and for biogenesis of the outer membrane. Transmembrane domains (TMD) form a pore in the inner membrane and the ATP-binding domain (NBD) is responsible for energy generation K06147,K11085 - - 2.653e-244 766.0
DPH3_k127_12543638_1 PFAM Three-deoxy-D-manno-octulosonic-acid transferase K02527 - 2.4.99.12,2.4.99.13,2.4.99.14,2.4.99.15 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000385 374.0
DPH3_k127_12543638_10 Transfers the 4'-phosphopantetheine moiety from coenzyme A to a Ser of acyl-carrier-protein K00997 - 2.7.8.7 0.00000000000000000005142 96.0
DPH3_k127_12543638_11 FabA-like domain K02372 - 4.2.1.59 0.00000000217 65.0
DPH3_k127_12543638_12 Catalyzes the condensation reaction of fatty acid synthesis by the addition to an acyl acceptor of two carbons from malonyl-ACP K09458 - 2.3.1.179 0.00002976 46.0
DPH3_k127_12543638_2 Catalyzes the condensation reaction of fatty acid synthesis by the addition to an acyl acceptor of two carbons from malonyl-ACP K09458 - 2.3.1.179 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002017 349.0
DPH3_k127_12543638_3 - - - - 0.0000000000000000000000000000000000000000000000000000000000000000000002658 242.0
DPH3_k127_12543638_4 COG1028 Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) K00059 GO:0000166,GO:0003674,GO:0003824,GO:0004312,GO:0004316,GO:0005488,GO:0006082,GO:0006629,GO:0006631,GO:0006633,GO:0008150,GO:0008152,GO:0008610,GO:0009058,GO:0009987,GO:0016053,GO:0016491,GO:0016614,GO:0016616,GO:0016740,GO:0016746,GO:0016747,GO:0019752,GO:0030497,GO:0032787,GO:0036094,GO:0043436,GO:0044237,GO:0044238,GO:0044249,GO:0044255,GO:0044281,GO:0044283,GO:0046394,GO:0048037,GO:0050661,GO:0050662,GO:0055114,GO:0071704,GO:0072330,GO:0097159,GO:1901265,GO:1901363,GO:1901576 1.1.1.100 0.00000000000000000000000000000000000000000000000000000000000000000001265 241.0
DPH3_k127_12543638_5 Belongs to the beta-ketoacyl-ACP synthases family K09458 - 2.3.1.179 0.00000000000000000000000000000000000000000000000117 190.0
DPH3_k127_12543638_6 Catalyzes the condensation reaction of fatty acid synthesis by the addition to an acyl acceptor of two carbons from malonyl-ACP K09458 - 2.3.1.179 0.000000000000000000000000000000000000003018 163.0
DPH3_k127_12543638_7 Lipid A biosynthesis K02517 - 2.3.1.241 0.000000000000000000000000000000000000005607 157.0
DPH3_k127_12543638_8 Putative regulatory protein - - - 0.0000000000000000000000000004236 115.0
DPH3_k127_12543638_9 3-hydroxymyristoyl 3-hydroxydecanoyl-(acyl carrier protein) K02372 - 4.2.1.59 0.00000000000000000000003446 104.0
DPH3_k127_12548090_0 Na+-transporting oxaloacetate decarboxylase beta subunit K01572 - 4.1.1.3 4.77e-204 638.0
DPH3_k127_12548090_1 hydrolase of the alpha beta superfamily K07018 - - 0.0000000000000000000000000000000000000000001073 166.0
DPH3_k127_12555131_0 PFAM sigma-54 factor interaction domain-containing protein - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003735 518.0
DPH3_k127_12555131_1 Dinitrogenase iron-molybdenum cofactor - - - 0.000000000000000000000003352 106.0
DPH3_k127_12555131_2 COG1943 Transposase and inactivated derivatives - - - 0.000000000000001048 84.0
DPH3_k127_12605375_0 PFAM Transposase IS66 family K07484 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005637 583.0
DPH3_k127_12605375_1 PFAM IS66 Orf2 like protein K07484 - - 0.000000000000000000000000000000000000000001893 158.0
DPH3_k127_12605375_2 Phage integrase family K03733 - - 0.000000000000000000000000000000001281 139.0
DPH3_k127_12632029_0 Catalyzes two steps in the biosynthesis of coenzyme A. In the first step cysteine is conjugated to 4'-phosphopantothenate to form 4-phosphopantothenoylcysteine, in the latter compound is decarboxylated to form 4'-phosphopantotheine K13038 - 4.1.1.36,6.3.2.5 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001022 533.0
DPH3_k127_12632029_1 NfeD-like C-terminal, partner-binding K07403 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001776 504.0
DPH3_k127_12632029_2 Uracil DNA glycosylase superfamily K21929 - 3.2.2.27 0.00000000000000000000000000000000000000000000000000000000000000000000000004531 256.0
DPH3_k127_12632029_3 Metallo-beta-lactamase superfamily - - - 0.00000000000000000000000000000000000000000000000000000000000000000000007521 246.0
DPH3_k127_12632029_4 PFAM Nitroreductase - - - 0.0000000000000000000000000000000000000000000000000000000000000000001112 234.0
DPH3_k127_12632029_5 - - - - 0.0000000000000000000000000000002557 130.0
DPH3_k127_12632029_6 - - - - 0.000000000726 69.0
DPH3_k127_12636826_0 Belongs to the class-II pyridoxal-phosphate-dependent aminotransferase family. Histidinol-phosphate aminotransferase subfamily K00817 - 2.6.1.9 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007056 430.0
DPH3_k127_12636826_1 sigma factor antagonist activity - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000366 394.0
DPH3_k127_12664727_0 Catalyzes the transfer of a phosphate group to glutamate to form L-glutamate 5-phosphate K00931 GO:0003674,GO:0003824,GO:0004349,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006082,GO:0006520,GO:0006560,GO:0006561,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0008652,GO:0009058,GO:0009064,GO:0009084,GO:0009987,GO:0016053,GO:0016301,GO:0016310,GO:0016740,GO:0016772,GO:0016774,GO:0018130,GO:0019202,GO:0019752,GO:0043436,GO:0044237,GO:0044238,GO:0044249,GO:0044281,GO:0044283,GO:0044424,GO:0044444,GO:0044464,GO:0046394,GO:0046483,GO:0071704,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576,GO:1901605,GO:1901607 2.7.2.11 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002302 589.0
DPH3_k127_12664727_1 Catalyzes the NADPH-dependent reduction of L-glutamate 5-phosphate into L-glutamate 5-semialdehyde and phosphate. The product spontaneously undergoes cyclization to form 1-pyrroline-5- carboxylate K00147 GO:0003674,GO:0003824,GO:0004350,GO:0008150,GO:0008152,GO:0016491,GO:0016620,GO:0016903,GO:0055114 1.2.1.41 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000263 547.0
DPH3_k127_12664727_2 histidine kinase HAMP region domain protein K02482 - 2.7.13.3 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002017 545.0
DPH3_k127_12684329_0 Belongs to the monovalent cation proton antiporter 2 (cpa2) transporter (TC 2.A.37) family K03455 - - 4.341e-212 664.0
DPH3_k127_12684329_1 Periplasmic binding proteins and sugar binding domain of LacI family K10439 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001871 390.0
DPH3_k127_12684329_2 Diguanylate cyclase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004499 374.0
DPH3_k127_12684329_3 Domain present in phytochromes and cGMP-specific phosphodiesterases. - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000002818 285.0
DPH3_k127_12684329_4 - - - - 0.000001435 54.0
DPH3_k127_12753927_0 Aminotransferase class I and II K00814 - 2.6.1.2 9.54e-220 686.0
DPH3_k127_12753927_1 Stage II sporulation protein E (SpoIIE) K07315 - 3.1.3.3 0.000000000000000000000000000000000000000000000000000000000000000001141 258.0
DPH3_k127_12753927_2 PFAM HNH endonuclease - - - 0.0000000000000000000000000000000000000000000000001346 179.0
DPH3_k127_12753927_3 antisigma factor binding K02066,K04749 - - 0.000000000000000000002207 96.0
DPH3_k127_12771698_0 NAD-binding protein involved in the addition of a carboxymethylaminomethyl (cmnm) group at the wobble position (U34) of certain tRNAs, forming tRNA-cmnm(5)s(2)U34 K03495 GO:0000166,GO:0001510,GO:0002097,GO:0002098,GO:0003674,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006139,GO:0006396,GO:0006399,GO:0006400,GO:0006725,GO:0006807,GO:0008033,GO:0008150,GO:0008152,GO:0009451,GO:0009987,GO:0010467,GO:0016070,GO:0030488,GO:0032259,GO:0034470,GO:0034641,GO:0034660,GO:0036094,GO:0043167,GO:0043168,GO:0043170,GO:0043412,GO:0043414,GO:0044237,GO:0044238,GO:0044260,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0048037,GO:0050660,GO:0050662,GO:0071704,GO:0090304,GO:0097159,GO:1901265,GO:1901360,GO:1901363 - 2.663e-290 903.0
DPH3_k127_12771698_1 SMART Elongator protein 3 MiaB NifB K07139 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000197 428.0
DPH3_k127_12771698_2 PFAM Major Facilitator Superfamily - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000024 407.0
DPH3_k127_12771698_3 TIGRFAM phosphate binding protein K02040 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003264 398.0
DPH3_k127_12771698_4 phosphate ABC transporter, inner membrane subunit PstA K02038 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001912 387.0
DPH3_k127_12771698_5 Catalyzes the formation of 6,7-dimethyl-8- ribityllumazine by condensation of 5-amino-6-(D- ribitylamino)uracil with 3,4-dihydroxy-2-butanone 4-phosphate. This is the penultimate step in the biosynthesis of riboflavin K00794 GO:0000906,GO:0003674,GO:0003824,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006766,GO:0006767,GO:0006771,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009110,GO:0009231,GO:0009987,GO:0016740,GO:0016765,GO:0017144,GO:0018130,GO:0034641,GO:0042364,GO:0042726,GO:0042727,GO:0044237,GO:0044249,GO:0044271,GO:0044281,GO:0044283,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0071704,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576 2.5.1.78 0.00000000000000000000000000000000000000000000000000000000000000000000000000034 258.0
DPH3_k127_12771698_6 Binding-protein-dependent transport system inner membrane component K02037 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000002799 257.0
DPH3_k127_12771698_7 Involved in transcription antitermination. Required for transcription of ribosomal RNA (rRNA) genes. Binds specifically to the boxA antiterminator sequence of the ribosomal RNA (rrn) operons K03625 - - 0.000000000000000000000000000000000000000001834 163.0
DPH3_k127_12771698_8 CGGC - - - 0.00000000000000000000000000000000000000002952 156.0
DPH3_k127_12788052_0 Histidine Phosphotransfer domain K03407 - 2.7.13.3 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001855 548.0
DPH3_k127_12788052_1 Two component signalling adaptor domain K03408 - - 0.0000000000000000000000000000000000000000000000000000000002624 206.0
DPH3_k127_12788052_2 cheY-homologous receiver domain K03413 - - 0.000000000000000000000000000000000000000000000000000401 187.0
DPH3_k127_12788052_3 archaeal or bacterial-type flagellum-dependent cell motility K03414 GO:0001539,GO:0003674,GO:0003824,GO:0004721,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005886,GO:0006464,GO:0006470,GO:0006793,GO:0006796,GO:0006807,GO:0006928,GO:0008150,GO:0008152,GO:0009987,GO:0016020,GO:0016311,GO:0016787,GO:0016788,GO:0016791,GO:0019538,GO:0032991,GO:0036211,GO:0040011,GO:0042578,GO:0042802,GO:0043170,GO:0043412,GO:0044237,GO:0044238,GO:0044260,GO:0044267,GO:0044424,GO:0044444,GO:0044464,GO:0048870,GO:0051179,GO:0051674,GO:0071704,GO:0071944,GO:0071973,GO:0071975,GO:0071977,GO:0097588,GO:0098561,GO:0140096,GO:1901564 - 0.0000000000000000000000000000000000000000000003311 184.0
DPH3_k127_12847256_0 Belongs to the thiolase family K00626 - 2.3.1.9 5.329e-205 643.0
DPH3_k127_12847256_1 acyl-coa dehydrogenase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002607 559.0
DPH3_k127_12847256_2 PFAM 3-hydroxyacyl-CoA dehydrogenase K00074,K15016 - 1.1.1.157,1.1.1.35,4.2.1.17 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004818 492.0
DPH3_k127_12847256_3 PFAM PEGA domain - - - 0.0000000000000000000000000000000000000006404 161.0
DPH3_k127_12847256_4 DUF167 K09131 - - 0.0000000000000000000002716 100.0
DPH3_k127_12847256_5 - - - - 0.000000000000000006074 92.0
DPH3_k127_12848333_0 Histone deacetylase domain K04768 - - 9.966e-220 689.0
DPH3_k127_12848333_1 Specifically methylates position 2 of adenine 2503 in 23S rRNA and position 2 of adenine 37 in tRNAs K06941 GO:0000154,GO:0001510,GO:0003674,GO:0003824,GO:0006139,GO:0006364,GO:0006396,GO:0006399,GO:0006400,GO:0006725,GO:0006807,GO:0008033,GO:0008150,GO:0008152,GO:0008168,GO:0008173,GO:0008175,GO:0008649,GO:0008757,GO:0009451,GO:0009987,GO:0010467,GO:0016070,GO:0016072,GO:0016740,GO:0016741,GO:0022613,GO:0030488,GO:0031167,GO:0032259,GO:0034470,GO:0034641,GO:0034660,GO:0042254,GO:0043170,GO:0043412,GO:0043414,GO:0044085,GO:0044237,GO:0044238,GO:0044260,GO:0046483,GO:0070475,GO:0071704,GO:0071840,GO:0090304,GO:0140098,GO:0140101,GO:0140102,GO:1901360 2.1.1.192 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005762 478.0
DPH3_k127_12848333_2 Hydantoinase/oxoprolinase N-terminal region - - - 0.0000000000000000000000002473 107.0
DPH3_k127_12848333_3 Catalyzes the hydrolysis of the adenine ring of phosphoribosyl-AMP K01496,K11755 - 3.5.4.19,3.6.1.31 0.00000000000000237 78.0
DPH3_k127_12862651_0 thus facilitating recognition of the initiation point. It is needed to translate mRNA with a short Shine-Dalgarno (SD) purine-rich sequence K02945 - - 4.73e-301 931.0
DPH3_k127_12862651_1 TIGRFAM Sua5 YciO YrdC YwlC family protein K07566 - 2.7.7.87 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000196 334.0
DPH3_k127_12862651_2 TIGRFAM signal peptide peptidase SppA, 36K type K04773 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005461 308.0
DPH3_k127_12862651_3 Belongs to the cytidylate kinase family. Type 1 subfamily K00945 - 2.7.4.25 0.000000000000000000000000000000000000000000000000000000000000000000001795 242.0
DPH3_k127_12862651_4 Ppx/GppA phosphatase family K01524 - 3.6.1.11,3.6.1.40 0.000001395 51.0
DPH3_k127_12874206_0 Signal transduction histidine kinase K07636 - 2.7.13.3 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003151 597.0
DPH3_k127_12874206_1 Natural resistance-associated macrophage protein - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005773 479.0
DPH3_k127_12874206_10 4Fe-4S single cluster domain - - - 0.00000000000009133 72.0
DPH3_k127_12874206_2 Binding-protein-dependent transport system inner membrane component K02038 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003078 442.0
DPH3_k127_12874206_3 Part of the ABC transporter complex PstSACB involved in phosphate import. Responsible for energy coupling to the transport system K02036 - 3.6.3.27 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000951 408.0
DPH3_k127_12874206_4 PFAM response regulator receiver K07657 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001129 322.0
DPH3_k127_12874206_5 Plays a role in the regulation of phosphate uptake K02039 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000004653 271.0
DPH3_k127_12874206_6 MgtE intracellular - - - 0.000000000000000000000000000000000000000000000000000000000000000000213 246.0
DPH3_k127_12874206_7 probably responsible for the translocation of the substrate across the membrane K02037 - - 0.00000000000000000000000000000000000000000000000008092 178.0
DPH3_k127_12874206_8 involved in chromosome partitioning K03496 - - 0.000000000000000000000000000000000000006242 155.0
DPH3_k127_12874206_9 - - - - 0.00000000000000000000000000000009322 130.0
DPH3_k127_1287790_0 Domain of unknown function (DUF3786) - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002757 316.0
DPH3_k127_1287790_1 PFAM YbaK prolyl-tRNA synthetase associated region - - - 0.00000000000000000000000000000000000000000000000000001591 194.0
DPH3_k127_1287790_2 L,D-transpeptidase catalytic domain - - - 0.000000000000000000000000000000000000000000000005459 179.0
DPH3_k127_12891746_0 Elongation factor Tu domain 2 K02355 - - 1.225e-259 807.0
DPH3_k127_12891746_1 - - - - 0.00000000007709 66.0
DPH3_k127_12893775_0 PFAM Oligopeptide transporter OPT superfamily - - - 0.0 1142.0
DPH3_k127_12893775_1 metal-dependent phosphohydrolase HD region K07814 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002074 454.0
DPH3_k127_12893775_2 Catalyzes the transfer of a methyl group from 5- methyltetrahydrofolate to homocysteine resulting in methionine formation - - - 0.0000000000000000000000002017 107.0
DPH3_k127_12893775_3 - - - - 0.000000000001599 67.0
DPH3_k127_12900489_0 Belongs to the peptidase S1C family K04771 - 3.4.21.107 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001257 616.0
DPH3_k127_12900489_1 Belongs to the metallo-dependent hydrolases superfamily. Adenine deaminase family K01486 - 3.5.4.2 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002548 378.0
DPH3_k127_12900489_2 Rubrerythrin - - - 0.0000000000000000000000000000000000000000000000000000000000005975 213.0
DPH3_k127_12900489_3 SMART HNH nuclease K07451 - - 0.00000000000000000000000000000000008577 139.0
DPH3_k127_12900489_4 In eubacteria ppGpp (guanosine 3'-diphosphate 5-' diphosphate) is a mediator of the stringent response that coordinates a variety of cellular activities in response to changes in nutritional abundance K00951,K01139 - 2.7.6.5,3.1.7.2 0.0002677 44.0
DPH3_k127_12919021_0 Flavin containing amine oxidoreductase K06954 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004733 451.0
DPH3_k127_12919021_1 Protein of unknown function (DUF1365) K00574,K09701 - 2.1.1.79 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005031 370.0
DPH3_k127_12919021_2 cyclopropane-fatty-acyl-phospholipid synthase K00574,K20238 - 2.1.1.317,2.1.1.79 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002774 317.0
DPH3_k127_129919_0 AAA domain (dynein-related subfamily) K03404,K03405 - 6.6.1.1 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004455 480.0
DPH3_k127_129919_1 HDOD domain - - - 0.000000000000000000000000000000000000000000000000000000002416 211.0
DPH3_k127_129919_2 PFAM Rubrerythrin - - - 0.00006371 46.0
DPH3_k127_1341519_0 Belongs to the transketolase family K00615 - 2.2.1.1 8.137e-290 904.0
DPH3_k127_1341519_1 Binds and transfers iron-sulfur (Fe-S) clusters to target apoproteins. Can hydrolyze ATP - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001733 427.0
DPH3_k127_1341519_2 - - - - 0.000000000000000000000000000000000000000000003397 169.0
DPH3_k127_1341519_3 AMMECR1 K09141 - - 0.000000000000000002258 85.0
DPH3_k127_1350268_0 CoA binding domain K01905,K22224 - 6.2.1.13 3.91e-272 852.0
DPH3_k127_1350268_1 SPFH domain-Band 7 family - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001054 535.0
DPH3_k127_1350268_2 DNA photolyase K01669 - 4.1.99.3 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008621 349.0
DPH3_k127_1350268_3 Psort location Cytoplasmic, score - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001163 319.0
DPH3_k127_135213_0 Helicase associated domain (HA2) Add an annotation K03578,K03579 - 3.6.4.13 0.0 1467.0
DPH3_k127_135213_1 - - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000008352 269.0
DPH3_k127_135213_2 - - - - 0.000000000000000000000000000001648 128.0
DPH3_k127_135213_3 The purine nucleoside phosphorylases catalyze the phosphorolytic breakdown of the N-glycosidic bond in the beta- (deoxy)ribonucleoside molecules, with the formation of the corresponding free purine bases and pentose-1-phosphate K03783 - 2.4.2.1 0.0002336 46.0
DPH3_k127_1399506_0 Catalyzes the formation of the alpha-1,6-glucosidic linkages in glycogen by scission of a 1,4-alpha-linked oligosaccharide from growing alpha-1,4-glucan chains and the subsequent attachment of the oligosaccharide to the alpha-1,6 position K00700 - 2.4.1.18 0.0 1038.0
DPH3_k127_1399506_1 Uncharacterised protein family UPF0047 - - - 0.00000000000000000000000000000000000000000000000000000001313 200.0
DPH3_k127_1399506_3 Belongs to the 'phage' integrase family - - - 0.00000000000001464 77.0
DPH3_k127_1407821_0 Catalyzes the activation of phenylacetic acid (PA) to phenylacetyl-CoA (PA-CoA) K01912 - 6.2.1.30 1.793e-233 728.0
DPH3_k127_1407821_1 Ammonium Transporter Family K03320 - - 1.437e-215 677.0
DPH3_k127_1407821_10 - - - - 0.00000000000001605 76.0
DPH3_k127_1407821_11 Glycosyltransferase family 9 (heptosyltransferase) K02843 - - 0.00000002613 56.0
DPH3_k127_1407821_2 PFAM Extracellular ligand-binding receptor K01999 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002386 589.0
DPH3_k127_1407821_3 Catalyzes the irreversible transfer of a propylamine group from the amino donor S-adenosylmethioninamine (decarboxy- AdoMet) to putrescine (1,4-diaminobutane) to yield spermidine K00797 - 2.5.1.16 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002708 584.0
DPH3_k127_1407821_4 diguanylate cyclase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000052 329.0
DPH3_k127_1407821_6 Tetratricopeptide TPR_2 repeat protein - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000005336 262.0
DPH3_k127_1407821_8 Belongs to the P(II) protein family K04751 - - 0.000000000000000000000000000000000000000009911 160.0
DPH3_k127_1407821_9 His Kinase A (phospho-acceptor) domain - - - 0.000000000000000000000000002437 116.0
DPH3_k127_1411883_0 Histidine kinase - - - 4.493e-239 755.0
DPH3_k127_1411883_1 CHAT domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001655 508.0
DPH3_k127_1411883_2 - - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007956 433.0
DPH3_k127_1411883_3 helix_turn_helix, Lux Regulon - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000476 271.0
DPH3_k127_1411883_4 Response regulator, receiver - - - 0.000000000000000000000000000000000004141 143.0
DPH3_k127_1430691_0 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic K00058 - 1.1.1.399,1.1.1.95 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000005802 296.0
DPH3_k127_1430691_1 Serine aminopeptidase, S33 - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000008916 289.0
DPH3_k127_1494497_0 Pyridoxal-phosphate dependent enzyme K01733 - 4.2.3.1 9.018e-235 735.0
DPH3_k127_1494497_1 Protein of unknown function (DUF554) K07150 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000993 292.0
DPH3_k127_1494497_2 Bacterial transferase hexapeptide (six repeats) - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000001312 252.0
DPH3_k127_1494497_3 - - - - 0.000000000000000000000000003572 117.0
DPH3_k127_1512569_0 PFAM Cation transporter K03498 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002754 506.0
DPH3_k127_1512569_1 PFAM sigma-54 factor interaction domain-containing protein - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005084 419.0
DPH3_k127_1512569_2 PFAM TrkA-N domain protein K03499 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004621 302.0
DPH3_k127_1512569_3 PFAM sigma-54 factor interaction domain-containing protein - - - 0.0000000000000000001287 91.0
DPH3_k127_1512729_0 His Kinase A (phosphoacceptor) domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000286 328.0
DPH3_k127_1512729_1 histidine kinase HAMP region domain protein K03406 - - 0.0004605 44.0
DPH3_k127_153250_0 Cytochrome b5-like Heme/Steroid binding domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000262 294.0
DPH3_k127_153250_1 amine dehydrogenase activity K20276 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000009531 302.0
DPH3_k127_153250_2 UbiA prenyltransferase family K03179 - 2.5.1.39 0.000000000000000000000000000000000000000000000000000000000000000000000000622 252.0
DPH3_k127_1548465_0 Required for accurate and efficient protein synthesis under certain stress conditions. May act as a fidelity factor of the translation reaction, by catalyzing a one-codon backward translocation of tRNAs on improperly translocated ribosomes. Back- translocation proceeds from a post-translocation (POST) complex to a pre-translocation (PRE) complex, thus giving elongation factor G a second chance to translocate the tRNAs correctly. Binds to ribosomes in a GTP-dependent manner K03596 - - 0.0 1004.0
DPH3_k127_1548465_1 Involved in the biosynthesis of porphyrin-containing compound - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001099 407.0
DPH3_k127_1548465_2 Aminotransferase class-V - - - 0.000000000000000000000000000000000000000000000000000000000000000005278 231.0
DPH3_k127_1548465_3 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase - - - 0.00000000000000000009109 93.0
DPH3_k127_1548465_4 Hemerythrin HHE cation binding domain K07216 - - 0.0000000000000000004639 92.0
DPH3_k127_1548465_5 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase - - - 0.00000004684 57.0
DPH3_k127_1643859_0 calcium- and calmodulin-responsive adenylate cyclase activity - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001433 466.0
DPH3_k127_1643859_1 - - - - 0.000000000000000000000000000000000000000000000000000000000000000002074 229.0
DPH3_k127_1685255_0 - - - - 0.0 1158.0
DPH3_k127_1702618_0 PFAM Aldehyde ferredoxin oxidoreductase K03738 - 1.2.7.5 2.634e-294 906.0
DPH3_k127_1702618_1 PFAM Citrate transporter - - - 2.969e-202 638.0
DPH3_k127_1702618_2 Glycogen debranching enzyme - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003131 587.0
DPH3_k127_1702618_3 4-alpha-glucanotransferase K00705 - 2.4.1.25 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007714 561.0
DPH3_k127_1702618_4 PFAM Membrane protein of - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000734 446.0
DPH3_k127_1702618_5 Bacterial periplasmic substrate-binding proteins K09969 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004275 426.0
DPH3_k127_1702618_6 bile acid:sodium symporter activity K03453 - - 0.0000000000000000000000000000000000000000000000000000001331 205.0
DPH3_k127_1702618_7 SpoIIAA-like - - - 0.000000000000000000000000000000000000000000000002168 175.0
DPH3_k127_1702618_8 - - - - 0.00000000000000000000000000000006453 129.0
DPH3_k127_1732393_0 In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity K02335 - 2.7.7.7 0.0 1066.0
DPH3_k127_1732393_1 Uncharacterized protein conserved in bacteria (DUF2344) - - - 1.424e-302 945.0
DPH3_k127_1732393_2 VWA containing CoxE family protein K09989 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002261 552.0
DPH3_k127_1732393_3 AAA domain (Cdc48 subfamily) - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000121 484.0
DPH3_k127_1732393_4 Master enzyme that delivers sulfur to a number of partners involved in Fe-S cluster assembly, tRNA modification or cofactor biosynthesis. Catalyzes the removal of elemental sulfur atoms from cysteine to produce alanine. Functions as a sulfur delivery protein for Fe-S cluster synthesis onto IscU, an Fe-S scaffold assembly protein, as well as other S acceptor proteins K04487 - 2.8.1.7 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001007 413.0
DPH3_k127_1732393_5 PP-loop family K14058 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001583 345.0
DPH3_k127_1732393_6 - - - - 0.0000000000000000000000008727 108.0
DPH3_k127_1738307_0 lyase activity - - - 0.0000000000000000004339 92.0
DPH3_k127_1738307_1 lipolytic protein G-D-S-L family - - - 0.0000007311 57.0
DPH3_k127_1738307_2 - - - - 0.000001531 56.0
DPH3_k127_1743014_0 Protein of unknown function (DUF1269) - - - 0.00000000000000000000000000000000000000000000001986 176.0
DPH3_k127_1743014_1 Phosphorylase is an important allosteric enzyme in carbohydrate metabolism. Enzymes from different sources differ in their regulatory mechanisms and in their natural substrates. However, all known phosphorylases share catalytic and structural properties K00688 - 2.4.1.1 0.000000000000000000000000000000000000000008411 157.0
DPH3_k127_1743014_2 PFAM transposase IS4 family protein - - - 0.0000000000000000000004183 97.0
DPH3_k127_1793287_0 NMT1-like family K02051 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009313 330.0
DPH3_k127_1793287_1 PFAM binding-protein-dependent transport systems inner membrane component K02050 - - 0.0000000000000000000000000000000000000000000000000000000000000006173 226.0
DPH3_k127_1793287_2 binding domain protein - - - 0.0000000007374 69.0
DPH3_k127_1817137_0 AMP-dependent synthetase and ligase K01897 - 6.2.1.3 1.778e-247 775.0
DPH3_k127_1817137_1 Catalyzes the attachment of glutamate to tRNA(Glu) in a two-step reaction glutamate is first activated by ATP to form Glu-AMP and then transferred to the acceptor end of tRNA(Glu) K01885 - 6.1.1.17 1.088e-234 734.0
DPH3_k127_1817137_10 Electron transfer flavoprotein domain K03521 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008913 380.0
DPH3_k127_1817137_11 Fatty acid synthesis protein K03621 - 2.3.1.15 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006735 351.0
DPH3_k127_1817137_12 His Kinase A (phosphoacceptor) domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000002334 310.0
DPH3_k127_1817137_13 heat shock protein DnaJ domain protein K03686,K05516 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000552 289.0
DPH3_k127_1817137_14 Ribosomal protein L11 methyltransferase (PrmA) K15460 - 2.1.1.223 0.0000000000000000000000000000000000000000000000000000000000000000001735 237.0
DPH3_k127_1817137_15 Uncharacterized ACR, COG1399 K07040 - - 0.00000000000000000000000000000000000000000000000000000000000000002114 229.0
DPH3_k127_1817137_16 PFAM histidine kinase, HAMP region domain protein K03406 - - 0.0000000000000000000000000000000003252 152.0
DPH3_k127_1817137_17 Belongs to the bacterial ribosomal protein bL32 family K02911 GO:0003674,GO:0003735,GO:0005198 - 0.000000000000000000003671 94.0
DPH3_k127_1817137_2 Male sterility protein K08678 - 4.1.1.35 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005488 549.0
DPH3_k127_1817137_3 PFAM Acyl-CoA dehydrogenase K00248 - 1.3.8.1 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005718 549.0
DPH3_k127_1817137_4 Catalyzes the condensation reaction of fatty acid synthesis by the addition to an acyl acceptor of two carbons from malonyl-ACP. Catalyzes the first condensation reaction which initiates fatty acid synthesis and may therefore play a role in governing the total rate of fatty acid production. Possesses both acetoacetyl-ACP synthase and acetyl transacylase activities. Its substrate specificity determines the biosynthesis of branched- chain and or straight-chain of fatty acids K00648 - 2.3.1.180 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004937 527.0
DPH3_k127_1817137_5 Protein of unknown function (DUF1015) - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003951 516.0
DPH3_k127_1817137_6 PFAM thiamine pyrophosphate enzyme K00170 - 1.2.7.1 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002292 480.0
DPH3_k127_1817137_7 Electron transfer flavoprotein FAD-binding domain K03522 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004586 457.0
DPH3_k127_1817137_8 Enoyl-(Acyl carrier protein) reductase K00059 - 1.1.1.100 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008344 426.0
DPH3_k127_1817137_9 ferredoxin oxidoreductase alpha subunit K00169 - 1.2.7.1 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001184 386.0
DPH3_k127_1821741_0 Catalyzes the dephosphorylation of undecaprenyl diphosphate (UPP). Confers resistance to bacitracin K06153 - 3.6.1.27 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007375 400.0
DPH3_k127_1821741_1 4Fe-4S binding domain K00196 - - 0.00000000000000000000000000000000000000000003765 168.0
DPH3_k127_1821741_2 Thioredoxin-like [2Fe-2S] ferredoxin - - - 0.00000000000000000000000000000000001526 141.0
DPH3_k127_1821741_3 COG1894 NADH ubiquinone oxidoreductase, NADH-binding (51 kD) subunit K00335,K18331 - 1.12.1.3,1.6.5.3 0.000000000006167 70.0
DPH3_k127_1821741_4 Formiminotransferase-cyclodeaminase - - - 0.000000001656 63.0
DPH3_k127_1826435_0 cysteine-tRNA ligase activity - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001333 418.0
DPH3_k127_1826435_1 Acetyltransferase (GNAT) domain - - - 0.000000000000000000000000000000000000000000000000000000000000000004634 237.0
DPH3_k127_1826435_2 Haloacid dehalogenase-like hydrolase K07025 - - 0.00000002261 63.0
DPH3_k127_182723_0 Prevents misfolding and promotes the refolding and proper assembly of unfolded polypeptides generated under stress conditions K04077 - - 2.61e-230 720.0
DPH3_k127_182723_1 ATP binding to DnaK triggers the release of the substrate protein, thus completing the reaction cycle. Several rounds of ATP-dependent interactions between DnaJ, DnaK and GrpE are required for fully efficient folding. Also involved, together with DnaK and GrpE, in the DNA replication of plasmids through activation of initiation proteins K03686 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003771 550.0
DPH3_k127_182723_2 transport system involved in gliding motility auxiliary component-like K01992 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001662 507.0
DPH3_k127_182723_3 AAA domain, putative AbiEii toxin, Type IV TA system K01990 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001239 441.0
DPH3_k127_182723_4 ABC-2 family transporter protein K01992 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002324 350.0
DPH3_k127_182723_5 Cobalt transport protein K16783,K16785 - - 0.00000000000000000000000000000000000000000000000000007646 196.0
DPH3_k127_182723_6 Promotes RNA polymerase assembly. Latches the N- and C- terminal regions of the beta' subunit thereby facilitating its interaction with the beta and alpha subunits K03060 - 2.7.7.6 0.000000000000000000000000292 109.0
DPH3_k127_182723_8 - - - - 0.000000000000000002124 87.0
DPH3_k127_182723_9 Domain of unknown function (DUF4340) - - - 0.00000007314 65.0
DPH3_k127_1873090_0 Cell wall formation. Adds enolpyruvyl to UDP-N- acetylglucosamine K00790 - 2.5.1.7 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001346 537.0
DPH3_k127_1873090_1 Methylates the class 1 translation termination release factors RF1 PrfA and RF2 PrfB on the glutamine residue of the universally conserved GGQ motif K02493 GO:0003674,GO:0003824,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006464,GO:0006479,GO:0006807,GO:0008150,GO:0008152,GO:0008168,GO:0008170,GO:0008213,GO:0008276,GO:0008757,GO:0009987,GO:0016740,GO:0016741,GO:0018364,GO:0019538,GO:0032259,GO:0036009,GO:0036211,GO:0043170,GO:0043412,GO:0043414,GO:0044237,GO:0044238,GO:0044260,GO:0044267,GO:0044424,GO:0044444,GO:0044464,GO:0071704,GO:0140096,GO:1901564 2.1.1.297 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005558 321.0
DPH3_k127_1873090_2 Peptide chain release factor 1 directs the termination of translation in response to the peptide chain termination codons UAG and UAA K02835 - - 0.000000000000000000000005414 102.0
DPH3_k127_1874508_0 Pyridine nucleotide-disulphide oxidoreductase, dimerisation - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000483 571.0
DPH3_k127_1874508_1 Biotin-protein ligase, N terminal - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002453 433.0
DPH3_k127_1874508_2 NADH pyrophosphatase-like rudimentary NUDIX domain K03426 - 3.6.1.22 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001158 332.0
DPH3_k127_1874508_3 Nitroreductase family - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000002021 287.0
DPH3_k127_1874508_4 - - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000004414 258.0
DPH3_k127_1874508_5 - - - - 0.00000000000000000000002017 106.0
DPH3_k127_1874508_6 Transglycosylase SLT domain K08305 - - 0.0000000000000000003069 99.0
DPH3_k127_1874508_7 His Kinase A (phosphoacceptor) domain - - - 0.000000001351 61.0
DPH3_k127_1905841_0 Pyruvate phosphate dikinase, PEP K01007 - 2.7.9.2 7.561e-195 621.0
DPH3_k127_1905841_1 PFAM response regulator receiver - - - 0.000000000000000000000000000000000000000000000000000001 195.0
DPH3_k127_1938609_0 Amino-transferase class IV K00826 - 2.6.1.42 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003667 553.0
DPH3_k127_1938609_1 Ribosomal protein S1-like RNA-binding domain K02945 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002137 332.0
DPH3_k127_1938609_2 flavin adenine dinucleotide biosynthetic process K00953,K14776,K15429 - 2.1.1.228,2.7.7.2,3.6.4.13 0.00001183 49.0
DPH3_k127_1940560_0 transferase activity, transferring glycosyl groups - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000002564 293.0
DPH3_k127_1940560_1 - - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000001735 265.0
DPH3_k127_1940560_2 Transport of potassium into the cell K03549 - - 0.00000000000000007001 81.0
DPH3_k127_1942705_0 PFAM Prenyltransferase squalene oxidase K01852,K06045 - 4.2.1.129,5.4.99.17,5.4.99.7 3.464e-278 869.0
DPH3_k127_1942705_1 Carotenoid biosynthesis protein - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001343 364.0
DPH3_k127_1942705_2 Radical SAM domain protein - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009866 321.0
DPH3_k127_1942705_3 PFAM purine or other phosphorylase family 1 K01243 - 3.2.2.9 0.0000000000000000000007549 107.0
DPH3_k127_1951846_0 - - - - 0.000000000000000000000000000000000000000000000000000000000000001878 228.0
DPH3_k127_1951846_1 Core component of the KaiABC clock protein complex, which constitutes the main circadian regulator in cyanobacteria. Binds to DNA. The KaiABC complex may act as a promoter-nonspecific transcription regulator that represses transcription, possibly by acting on the state of chromosome compaction - - - 0.0000000000000000000000000000000000000000000000000000000000003254 220.0
DPH3_k127_1951846_2 Catalyzes the GTP-dependent ribosomal translocation step during translation elongation. During this step, the ribosome changes from the pre-translocational (PRE) to the post- translocational (POST) state as the newly formed A-site-bound peptidyl-tRNA and P-site-bound deacylated tRNA move to the P and E sites, respectively. Catalyzes the coordinated movement of the two tRNA molecules, the mRNA and conformational changes in the ribosome K02355 - - 0.00000000000000002456 81.0
DPH3_k127_1983789_0 Belongs to the ribF family K11753 - 2.7.1.26,2.7.7.2 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002179 383.0
DPH3_k127_1983789_1 GTPase that associates with the 50S ribosomal subunit and may have a role during protein synthesis or ribosome biogenesis K03665 - - 0.000000000000000001296 87.0
DPH3_k127_2025836_0 Belongs to the succinate dehydrogenase fumarate reductase iron-sulfur protein family K16950 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008094 459.0
DPH3_k127_2025836_1 PFAM cytochrome c biogenesis protein, transmembrane region K06196 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004865 374.0
DPH3_k127_2025836_2 Predicted permease K07089 - - 0.000000000000000000000000000000000000000000000000000000000000000000000003054 246.0
DPH3_k127_2025836_3 2 iron, 2 sulfur cluster binding K02823 - - 0.00000000000000000000000000000000000000000000000000000003378 201.0
DPH3_k127_2025836_4 Rhodanese Homology Domain - - - 0.0000000000000000000000000000000000000000000001685 173.0
DPH3_k127_2025836_5 PFAM Methylamine - - - 0.000000000000000000000000000000000000000000003201 173.0
DPH3_k127_2025836_6 PFAM Thioredoxin K03671 - - 0.0000000000000000000000000000000000000000008074 160.0
DPH3_k127_2025836_7 - Catabolite gene activator and regulatory subunit of cAMP-dependent protein - - - 0.00000000000000000000000000000000000000002758 157.0
DPH3_k127_2025836_8 - - - - 0.0000000000002695 73.0
DPH3_k127_2025836_9 Cation efflux family K16264 - - 0.0002154 52.0
DPH3_k127_2111908_0 FAD binding domain K00239,K00278 - 1.3.5.1,1.3.5.4,1.4.3.16 7.118e-283 876.0
DPH3_k127_2111908_1 4Fe-4S dicluster domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002559 460.0
DPH3_k127_2111908_2 Cysteine-rich domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003928 455.0
DPH3_k127_2111908_3 TIGRFAM hydro-lyases, Fe-S type, tartrate fumarate subfamily, alpha region K01677 - 4.2.1.2 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001867 389.0
DPH3_k127_2111908_4 Hydro-lyase, Fe-S type, tartrate fumarate subfamily, beta subunit K01678 - 4.2.1.2 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000001894 277.0
DPH3_k127_2111908_5 4Fe-4S dicluster domain - - - 0.0000000000000000000000000000000000000000000000000000000000000002578 224.0
DPH3_k127_2111908_6 Transposase IS66 family - - - 0.000000000000006051 78.0
DPH3_k127_2126249_0 Histidine kinase - - - 0.0000000000000000000000000000000000000000000000000000000000000000002223 238.0
DPH3_k127_2126249_1 Catalyzes the ATP-dependent amidation of the two carboxylate groups at positions a and c of cobyrinate, using either L-glutamine or ammonia as the nitrogen source K02224 - 6.3.5.11,6.3.5.9 0.000000000000000000000000000000000000000000000000000000000000000006095 229.0
DPH3_k127_2146069_0 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain K00174 - 1.2.7.11,1.2.7.3 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000161 590.0
DPH3_k127_2146069_1 TIGRFAM pyruvate ferredoxin flavodoxin oxidoreductase, beta subunit K00175 - 1.2.7.11,1.2.7.3 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003902 412.0
DPH3_k127_216600_0 Anion-transporting ATPase K01551 - 3.6.3.16 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001654 454.0
DPH3_k127_216600_1 ADP-ribosylglycohydrolase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001303 357.0
DPH3_k127_216600_2 Catalyzes the oxidation of glucose 6-phosphate to 6- phosphogluconolactone K00036 - 1.1.1.363,1.1.1.49 0.00000000000000000000001888 100.0
DPH3_k127_2169914_0 Aldehyde ferredoxin oxidoreductase K03738 - 1.2.7.5 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003145 480.0
DPH3_k127_2169914_1 GHKL domain K07709,K07711 - 2.7.13.3 0.00000000000000000000000000000000000000000000000000004195 202.0
DPH3_k127_2169914_2 Stage II sporulation K07315 - 3.1.3.3 0.00000000000000000000008094 111.0
DPH3_k127_2183257_0 sulphate transporter - - - 0.000000000000000000000000000000000000000000000000000000000000000001516 230.0
DPH3_k127_2183257_1 phosphohydrolase - - - 0.000006537 52.0
DPH3_k127_2192175_0 Catalyzes the condensation of 2 ATP molecules into cyclic di-AMP (c-di-AMP), a second messenger used to regulate differing processes in different bacteria - - - 1.226e-195 620.0
DPH3_k127_2192175_1 transcription regulator activity K03925 GO:0000976,GO:0001067,GO:0003674,GO:0003676,GO:0003677,GO:0003690,GO:0003700,GO:0005488,GO:0006355,GO:0008150,GO:0009889,GO:0009890,GO:0009892,GO:0010468,GO:0010556,GO:0010558,GO:0010605,GO:0010629,GO:0019219,GO:0019222,GO:0031323,GO:0031324,GO:0031326,GO:0031327,GO:0031333,GO:0043254,GO:0043565,GO:0044087,GO:0044212,GO:0045892,GO:0045934,GO:0048519,GO:0048523,GO:0050789,GO:0050794,GO:0051128,GO:0051129,GO:0051171,GO:0051172,GO:0051252,GO:0051253,GO:0060255,GO:0065007,GO:0080090,GO:0097159,GO:0140110,GO:1901363,GO:1902679,GO:1903506,GO:1903507,GO:1990837,GO:2000112,GO:2000113,GO:2000142,GO:2000143,GO:2001141 - 0.0000000000000000000000000000000000000000000000000002142 188.0
DPH3_k127_2192175_2 Protein of unknown function (DUF2914) - - - 0.00000000000000000000000000000000000003135 148.0
DPH3_k127_2205315_0 Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family K03296,K18138 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007554 434.0
DPH3_k127_2205315_1 Biotin-lipoyl like K07799 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002853 365.0
DPH3_k127_2205315_2 Bacterial regulatory proteins, tetR family - - - 0.000000000000000000000000000000000000001071 157.0
DPH3_k127_2218991_0 SMART Elongator protein 3 MiaB NifB - - - 6.352e-241 754.0
DPH3_k127_2218991_1 MMPL family K07003 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008112 604.0
DPH3_k127_2218991_2 PFAM Outer membrane efflux protein - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000871 544.0
DPH3_k127_2218991_3 PFAM Glycosyl transferase family 2 K00720 - 2.4.1.80 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005985 381.0
DPH3_k127_2218991_4 MMPL family K07003 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002056 350.0
DPH3_k127_2218991_5 PFAM methyltransferase small - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000005084 279.0
DPH3_k127_2218991_6 intermembrane phospholipid transfer K07323 - - 0.000000000000000000000000000000000000000000000000000000009476 204.0
DPH3_k127_2218991_7 spore germination - - - 0.0000000000000000000000000000000003491 135.0
DPH3_k127_2218991_8 membrane K08978 - - 0.00000000000000000000000001176 114.0
DPH3_k127_2255128_0 CHAT domain - - - 0.0 1034.0
DPH3_k127_2255128_1 ATPase MipZ K03609 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002285 429.0
DPH3_k127_2255128_2 5' nucleotidase, deoxy (Pyrimidine), cytosolic type C protein (NT5C) K05967 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000004387 268.0
DPH3_k127_2255128_4 Cell division inhibitor that blocks the formation of polar Z ring septums. Rapidly oscillates between the poles of the cell to destabilize FtsZ filaments that have formed before they mature into polar Z rings. Prevents FtsZ polymerization K03610 - - 0.000000000000000000000000000000000000000000000000000000000001702 216.0
DPH3_k127_2255128_5 Prevents the cell division inhibition by proteins MinC and MinD at internal division sites while permitting inhibition at polar sites. This ensures cell division at the proper site by restricting the formation of a division septum at the midpoint of the long axis of the cell K03608 - - 0.00000000000000000000000000000000000003511 145.0
DPH3_k127_2255128_6 Mut7-C ubiquitin - - - 0.0000000000000000000000001462 110.0
DPH3_k127_2262918_0 prohibitin homologues - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005709 493.0
DPH3_k127_2262918_1 prohibitin homologues - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006742 467.0
DPH3_k127_2262918_2 Calcineurin-like phosphoesterase superfamily domain K07098 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001029 359.0
DPH3_k127_2262918_3 Metallo-beta-lactamase superfamily - - - 0.0000000000000000000000000000000000000000000000000000000004187 209.0
DPH3_k127_2262918_4 - - - - 0.0000000000000000000000000000000000000000000000000013 186.0
DPH3_k127_2262918_5 Calcineurin-like phosphoesterase K07098 - - 0.000000004458 61.0
DPH3_k127_2262918_6 MviN-like protein - - - 0.00001467 57.0
DPH3_k127_2302002_0 HD domain - - - 0.00000000000000000000000000000000000000000000000000000001591 209.0
DPH3_k127_2314837_0 ATPase, P-type (transporting), HAD superfamily, subfamily IC K01534 - 3.6.3.3,3.6.3.5 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000313 606.0
DPH3_k127_2314837_1 YHS domain - - - 0.000000000000000000003466 95.0
DPH3_k127_2318264_0 Pyridine nucleotide-disulphide oxidoreductase K03388 - 1.8.7.3,1.8.98.4,1.8.98.5,1.8.98.6 0.0 1553.0
DPH3_k127_2318264_1 4Fe-4S dicluster domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000069 519.0
DPH3_k127_2318264_2 Oxidoreductase NAD-binding domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009244 515.0
DPH3_k127_2318264_3 4Fe-4S dicluster domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002904 516.0
DPH3_k127_2318264_4 4Fe-4S dicluster domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005567 305.0
DPH3_k127_2318264_5 PFAM Cysteine-rich - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000001187 274.0
DPH3_k127_2318264_6 PFAM methyl-viologen-reducing hydrogenase, delta subunit - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000005167 265.0
DPH3_k127_2336094_0 Belongs to the anaerobic coproporphyrinogen-III oxidase family - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007364 498.0
DPH3_k127_2336094_1 EamA-like transporter family - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001828 343.0
DPH3_k127_2352413_0 ATP-dependent Clp protease ATP-binding subunit ClpA K03694 - - 9.119e-303 948.0
DPH3_k127_2352413_1 Catalyzes the anti-1,4-elimination of the C-3 phosphate and the C-6 proR hydrogen from 5-enolpyruvylshikimate-3-phosphate (EPSP) to yield chorismate, which is the branch point compound that serves as the starting substrate for the three terminal pathways of aromatic amino acid biosynthesis. This reaction introduces a second double bond into the aromatic ring system K01736 - 4.2.3.5 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008588 552.0
DPH3_k127_2352413_2 Catalyzes the transfer of a methyl group from 5- methyltetrahydrofolate to homocysteine resulting in methionine formation - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004722 513.0
DPH3_k127_2352413_3 Functions in the N-end rule pathway of protein degradation where it conjugates Leu, Phe and, less efficiently, Met from aminoacyl-tRNAs to the N-termini of proteins containing an N-terminal arginine or lysine K00684 - 2.3.2.6 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000001165 302.0
DPH3_k127_2352413_4 Involved in the modulation of the specificity of the ClpAP-mediated ATP-dependent protein degradation K06891 - - 0.0000000000000000000000000000000000004785 141.0
DPH3_k127_2431202_0 RNA polymerase sigma factor K03088 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000009981 273.0
DPH3_k127_2431202_1 - - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000002351 278.0
DPH3_k127_2431202_2 PFAM glycoside hydrolase, family 13 domain protein - - - 0.00000000000000000000000000000000007983 136.0
DPH3_k127_2431202_3 PFAM glycoside hydrolase family 13 domain protein - - - 0.0000000000000000000000004843 113.0
DPH3_k127_2431202_4 Uncharacterized protein domain (DUF2202) - - - 0.000000000476 63.0
DPH3_k127_2431202_6 Belongs to the class-II aminoacyl-tRNA synthetase family K04567 - 6.1.1.6 0.0001268 44.0
DPH3_k127_2480918_0 Catalyzes the attachment of threonine to tRNA(Thr) in a two-step reaction L-threonine is first activated by ATP to form Thr-AMP and then transferred to the acceptor end of tRNA(Thr) K01868 - 6.1.1.3 2.869e-231 736.0
DPH3_k127_2480918_1 Belongs to the thiolase family - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003298 606.0
DPH3_k127_2480918_2 transposase activity - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002231 479.0
DPH3_k127_2480918_3 PFAM peptidase C60, sortase A and B K07284 - 3.4.22.70 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007199 318.0
DPH3_k127_2480918_4 - - - - 0.00000000000000000004505 91.0
DPH3_k127_2480918_5 - - - - 0.00000002267 61.0
DPH3_k127_2489833_0 Part of the high-affinity ATP-driven potassium transport (or Kdp) system, which catalyzes the hydrolysis of ATP coupled with the electrogenic transport of potassium into the cytoplasm. This subunit binds and transports the potassium across the cytoplasmic membrane K01546 GO:0003674,GO:0003824,GO:0005215,GO:0005488,GO:0005575,GO:0005623,GO:0005886,GO:0006810,GO:0006811,GO:0006812,GO:0006813,GO:0008150,GO:0008324,GO:0008556,GO:0009987,GO:0015075,GO:0015077,GO:0015079,GO:0015318,GO:0015399,GO:0015405,GO:0015662,GO:0015672,GO:0016020,GO:0016462,GO:0016787,GO:0016817,GO:0016818,GO:0016887,GO:0017111,GO:0019829,GO:0022804,GO:0022853,GO:0022857,GO:0022890,GO:0030001,GO:0030955,GO:0031420,GO:0034220,GO:0042623,GO:0042625,GO:0042626,GO:0043167,GO:0043169,GO:0043492,GO:0044464,GO:0046872,GO:0046873,GO:0051179,GO:0051234,GO:0055085,GO:0071804,GO:0071805,GO:0071944,GO:0090662,GO:0098655,GO:0098660,GO:0098662,GO:0099131,GO:0099132 3.6.3.12 1.252e-214 673.0
DPH3_k127_2489833_1 Part of the high-affinity ATP-driven potassium transport (or Kdp) system, which catalyzes the hydrolysis of ATP coupled with the electrogenic transport of potassium into the cytoplasm. This subunit is responsible for energy coupling to the transport system K01547 - 3.6.3.12 2.837e-196 621.0
DPH3_k127_2499029_0 Belongs to the Glu Leu Phe Val dehydrogenases family K00261 - 1.4.1.3 3.165e-212 666.0
DPH3_k127_2499029_1 PFAM LOR SDH bifunctional enzyme conserved region - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005841 499.0
DPH3_k127_2499029_2 Belongs to the PEP-utilizing enzyme family K01007 - 2.7.9.2 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008838 503.0
DPH3_k127_2499029_3 Amino acid kinase family K00926 - 2.7.2.2 0.00000000000000000000000000000000000000000000000000000000000000005088 226.0
DPH3_k127_2499029_4 - - - - 0.000000000000000000000000000001697 130.0
DPH3_k127_2570618_0 Cytochrome C biogenesis protein transmembrane region K04084 - 1.8.1.8 9.375e-209 657.0
DPH3_k127_2570618_1 PFAM Radical SAM domain protein K01012 - 2.8.1.6 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006734 372.0
DPH3_k127_2570618_2 PFAM Chromate transporter K07240 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006505 351.0
DPH3_k127_2570618_3 Rhodanese-like domain - - - 0.0000000000000000000000000000000000000000000006758 168.0
DPH3_k127_2570618_4 PFAM regulatory protein, ArsR K22043 - - 0.00000000000000000000000000000000001674 140.0
DPH3_k127_2570618_5 - - - - 0.00000000000000000000000005507 109.0
DPH3_k127_2570618_7 PFAM Type IV pilus assembly PilZ - - - 0.0000000911 59.0
DPH3_k127_26258_0 TIGRFAM The (Largely Gram-negative Bacterial) Hydrophobe Amphiphile Efflux-1 (HAE1) Family K03296,K18138 - - 0.0 1526.0
DPH3_k127_26258_1 Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family K03585 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003043 580.0
DPH3_k127_26258_2 PFAM Bacterial regulatory proteins, tetR family - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009723 324.0
DPH3_k127_263337_0 PFAM OsmC family protein K06889,K07397 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003344 498.0
DPH3_k127_263337_1 associated with various cellular activities K03924 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007646 429.0
DPH3_k127_263337_2 Protein of unknown function DUF58 - - - 0.000000000000000000008952 98.0
DPH3_k127_2651930_0 ATPase, P-type (transporting), HAD superfamily, subfamily IC K01537 - 3.6.3.8 0.0 1087.0
DPH3_k127_2651930_1 Iron-sulfur cluster-binding domain - - - 0.000000000000000000000000000000000000000000000000000000002807 205.0
DPH3_k127_2702425_0 PFAM Radical SAM - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005937 385.0
DPH3_k127_2702425_1 CGGC - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000002288 284.0
DPH3_k127_2702425_2 Elongator protein 3, MiaB family, Radical SAM K01012 - 2.8.1.6 0.000000000000000000000000000000000000000000000000000000000000000000002804 237.0
DPH3_k127_2706809_0 LUD domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006251 317.0
DPH3_k127_2706809_1 HicA toxin of bacterial toxin-antitoxin, - - - 0.000000000000000000003607 95.0
DPH3_k127_2706809_2 PilZ domain - - - 0.000000000000000000003945 99.0
DPH3_k127_2706809_3 FOG TPR repeat, SEL1 subfamily K07126,K13582 - - 0.00000000000000001968 84.0
DPH3_k127_2706809_4 protein encoded in hypervariable junctions of pilus gene clusters - - - 0.0000000000001888 71.0
DPH3_k127_2714361_0 Acts as a processive, ATP-dependent zinc metallopeptidase for both cytoplasmic and membrane proteins. Plays a role in the quality control of integral membrane proteins K03798 - - 2.07e-287 896.0
DPH3_k127_2714361_1 Catalyzes the conversion of glucosamine-6-phosphate to glucosamine-1-phosphate K03431 - 5.4.2.10 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008402 590.0
DPH3_k127_2714361_2 Catalyzes the condensation of para-aminobenzoate (pABA) with 6-hydroxymethyl-7,8-dihydropterin diphosphate (DHPt-PP) to form 7,8-dihydropteroate (H2Pte), the immediate precursor of folate derivatives K00796,K13941 - 2.5.1.15,2.7.6.3 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006746 376.0
DPH3_k127_2714361_3 Belongs to the Nudix hydrolase family K03574 - 3.6.1.55 0.00000000000000000000005466 108.0
DPH3_k127_2714361_4 Catalyzes the phosphorylation of pantothenate (Pan), the first step in CoA biosynthesis K03525 - 2.7.1.33 0.0000000000000003117 81.0
DPH3_k127_2731261_0 TIGRFAM exonuclease SbcC K03546 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001484 433.0
DPH3_k127_2731261_1 PFAM phospholipid glycerol acyltransferase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003348 317.0
DPH3_k127_2731261_2 Periplasmic binding protein domain K01999 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000001739 287.0
DPH3_k127_2731261_3 - - - - 0.000000000000000000000000000000000000000000000004328 176.0
DPH3_k127_2760781_0 recombinase activity - - - 1.175e-280 878.0
DPH3_k127_2760781_1 Reverse transcriptase (RNA-dependent DNA polymerase) - - - 0.00000000000000000000000007925 108.0
DPH3_k127_2760781_2 Family of unknown function (DUF5372) - - - 0.0002458 47.0
DPH3_k127_2773236_0 Universal stress protein family - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000002408 261.0
DPH3_k127_2794531_0 Belongs to the prokaryotic molybdopterin-containing oxidoreductase family K00123 - 1.17.1.9 8.524e-240 751.0
DPH3_k127_2794531_1 Phosphoesterase RecJ domain protein - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001009 325.0
DPH3_k127_2794531_2 Endonuclease that specifically degrades the RNA of RNA- DNA hybrids K03469 GO:0003674,GO:0003824,GO:0004518,GO:0004519,GO:0004521,GO:0004523,GO:0004540,GO:0006139,GO:0006259,GO:0006260,GO:0006261,GO:0006271,GO:0006273,GO:0006401,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0009056,GO:0009057,GO:0009058,GO:0009059,GO:0009987,GO:0016070,GO:0016787,GO:0016788,GO:0016891,GO:0016893,GO:0019439,GO:0022616,GO:0033567,GO:0034641,GO:0034645,GO:0034655,GO:0043137,GO:0043170,GO:0044237,GO:0044238,GO:0044248,GO:0044249,GO:0044260,GO:0044265,GO:0044270,GO:0046483,GO:0046700,GO:0071704,GO:0090304,GO:0090305,GO:0090501,GO:0090502,GO:0140098,GO:1901360,GO:1901361,GO:1901575,GO:1901576 3.1.26.4 0.0000000000000000000000000000000000000000000000000000000000000001498 224.0
DPH3_k127_2794531_3 PFAM molybdopterin oxidoreductase Fe4S4 region - - - 0.00000000000000000000000000000000000000000000000000000000000001519 217.0
DPH3_k127_2853888_0 NADPH-dependent FMN reductase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000001466 284.0
DPH3_k127_2853888_1 Type IV pilus biogenesis stability protein PilW - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000001121 302.0
DPH3_k127_2853888_2 Protein of unknown function (DUF3142) - - - 0.000000000000000000000000000000000000000000000000000000000000000000006357 250.0
DPH3_k127_2853888_3 His Kinase A (phosphoacceptor) domain - - - 0.000000000000000000000000000000003941 133.0
DPH3_k127_2853888_4 Domain of unknown function (DUF1330) - - - 0.000000000000000001048 89.0
DPH3_k127_285732_0 FAD-dependent pyridine nucleotide-disulphide oxidoreductase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001284 503.0
DPH3_k127_285732_1 4Fe-4S dicluster domain K16887 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006059 302.0
DPH3_k127_285732_2 Aminoacyl-tRNA editing domain - - - 0.00000000000000000000000000000000000000000000000000001632 192.0
DPH3_k127_285732_3 - - - - 0.0000000000000000000006325 96.0
DPH3_k127_2876599_0 Nickel-dependent hydrogenase K14126 - 1.8.98.5 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001554 505.0
DPH3_k127_2876599_1 NADH ubiquinone oxidoreductase, 20 Kd subunit K14128 - 1.8.98.5 0.000000000000000000000000000000000000000000000000000000000000000002911 234.0
DPH3_k127_2876599_2 Histidine kinase-like ATPases - - - 0.0000000000000000000000000000000000000000000000000000000003096 222.0
DPH3_k127_2876599_3 Sulfurtransferase TusA - - - 0.00000000000000000001282 93.0
DPH3_k127_2876599_4 PFAM ATP-binding region ATPase domain protein - - - 0.00000001212 68.0
DPH3_k127_2887384_0 Conserved carboxylase domain K01571,K01960,K03416 - 2.1.3.1,4.1.1.3,6.4.1.1 1.154e-216 680.0
DPH3_k127_2887384_1 MacB-like periplasmic core domain K02004 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002249 418.0
DPH3_k127_2887384_2 ABC transporter K02003 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000005791 286.0
DPH3_k127_2909433_0 serine-type D-Ala-D-Ala carboxypeptidase activity - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004384 599.0
DPH3_k127_2909433_1 Condenses 4-methyl-5-(beta-hydroxyethyl)thiazole monophosphate (THZ-P) and 2-methyl-4-amino-5-hydroxymethyl pyrimidine pyrophosphate (HMP-PP) to form thiamine monophosphate (TMP) K00788 - 2.5.1.3 0.0000000000000000000000000000000000000000000000000000000000000000000000000000001267 271.0
DPH3_k127_2909433_2 Biotin and Thiamin Synthesis associated domain K03150 - 4.1.99.19 0.0000000000000000000000000000000000001659 142.0
DPH3_k127_2909433_3 glutamine amidotransferase - - - 0.0000000000000000000004579 105.0
DPH3_k127_2909433_5 TIGRFAM thiamine biosynthesis protein ThiS K03154 - - 0.0000000000002341 76.0
DPH3_k127_2909433_6 PFAM glutamine amidotransferase class-II - - - 0.000000000003763 77.0
DPH3_k127_2917149_0 radical SAM K06871 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001483 449.0
DPH3_k127_2917149_1 CO dehydrogenase flavoprotein C-terminal domain K11178 - 1.17.1.4 0.00000000000000000000000000000000000000000000000000000000000000000003292 236.0
DPH3_k127_2917149_2 - - - - 0.000000000000000000000000000000000000000000000000000000000000001253 232.0
DPH3_k127_2917149_3 SnoaL-like domain - - - 0.000000000000000001491 97.0
DPH3_k127_2917149_4 - - - - 0.000000000864 64.0
DPH3_k127_2927014_0 Integral membrane sensor signal transduction histidine kinase K02482 - 2.7.13.3 1.176e-242 762.0
DPH3_k127_2927014_1 Sulfate permease family K03321 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002403 413.0
DPH3_k127_2927014_2 His Kinase A (phosphoacceptor) domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001167 317.0
DPH3_k127_2927014_3 PFAM response regulator receiver - - - 0.0000000000000000000000000000000000000000000000000001192 189.0
DPH3_k127_2927014_4 PFAM response regulator receiver - - - 0.000000000000000000000000000000000000000000001164 169.0
DPH3_k127_2927014_5 two component, sigma54 specific, transcriptional regulator, Fis family K07713,K07714,K07715 - - 0.000000000000000000000000000000000006578 140.0
DPH3_k127_2940907_0 NADH-Ubiquinone oxidoreductase (complex I), chain 5 K00341 - 1.6.5.3 5.941e-281 876.0
DPH3_k127_2940907_1 TIGRFAM proton-translocating NADH-quinone oxidoreductase, chain M K00342 - 1.6.5.3 5.856e-263 815.0
DPH3_k127_2940907_10 Respiratory-chain NADH dehydrogenase, 30 Kd subunit K00332 - 1.6.5.3 0.00000000000000000000000000000000000000000001063 166.0
DPH3_k127_2940907_11 NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient K00340,K05576 - 1.6.5.3 0.000000000000000000000000000000000000000003904 157.0
DPH3_k127_2940907_2 NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient K00343 - 1.6.5.3 5.974e-203 641.0
DPH3_k127_2940907_3 NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient K00333,K13378,K13380 GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005886,GO:0016020,GO:0044424,GO:0044464,GO:0071944 1.6.5.3 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006436 587.0
DPH3_k127_2940907_4 NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient. This subunit may bind ubiquinone K00337 - 1.6.5.3 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005869 541.0
DPH3_k127_2940907_5 Thioredoxin - - - 0.000000000000000000000000000000000000000000000000000000000000000000000002523 262.0
DPH3_k127_2940907_6 NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient K00338,K05580 - 1.6.5.3 0.000000000000000000000000000000000000000000000000000000000000000001987 230.0
DPH3_k127_2940907_7 PFAM NADH-ubiquinone plastoquinone oxidoreductase chain 6 K00339 - 1.6.5.3 0.0000000000000000000000000000000000000000000000000000000000001267 219.0
DPH3_k127_2940907_8 NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain K00244 - 1.3.5.4 0.000000000000000000000000000000000000000000000000000005569 199.0
DPH3_k127_2940907_9 PFAM peptidase U32 K08303 - - 0.00000000000000000000000000000000000000000000000006052 185.0
DPH3_k127_2974867_0 aminotransferase, class I and II K11358 - 2.6.1.1 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003775 591.0
DPH3_k127_2974867_1 Bacterial extracellular solute-binding protein, family 7 - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003721 507.0
DPH3_k127_2974867_10 Tripartite ATP-independent periplasmic transporters, DctQ component - - - 0.00000000000000000000000000003367 119.0
DPH3_k127_2974867_11 DNA repair - GO:0001510,GO:0003674,GO:0003824,GO:0006139,GO:0006396,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0008168,GO:0008173,GO:0009451,GO:0009987,GO:0010467,GO:0016070,GO:0016740,GO:0016741,GO:0032259,GO:0034641,GO:0036260,GO:0036261,GO:0043170,GO:0043412,GO:0043414,GO:0044237,GO:0044238,GO:0044260,GO:0046483,GO:0071164,GO:0071704,GO:0090304,GO:0140098,GO:1901360 - 0.000000000000000000007456 93.0
DPH3_k127_2974867_12 - - - - 0.00000000000000000001928 94.0
DPH3_k127_2974867_13 Tripartite ATP-independent periplasmic transporters, DctQ component - - - 0.0000000001539 62.0
DPH3_k127_2974867_14 peptidoglycan binding K03642,K03749 - - 0.00008979 54.0
DPH3_k127_2974867_2 Catalyzes the reversible reaction in which hydroxymethyl group from 5,10-methylenetetrahydrofolate is transferred onto alpha-ketoisovalerate to form ketopantoate K00606 - 2.1.2.11 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001754 415.0
DPH3_k127_2974867_3 AAA domain, putative AbiEii toxin, Type IV TA system K01990 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003877 372.0
DPH3_k127_2974867_4 PFAM Smr protein MutS2 - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000822 378.0
DPH3_k127_2974867_5 Catalyzes the NADPH-dependent reduction of ketopantoate into pantoic acid K00077 - 1.1.1.169 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005186 355.0
DPH3_k127_2974867_6 Belongs to the BI1 family K06890,K19416 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009401 304.0
DPH3_k127_2974867_7 - - - - 0.000000000000000000000000000000000000000000000000000000000001288 220.0
DPH3_k127_2974867_8 - - - - 0.000000000000000000000000000000000000000000006053 168.0
DPH3_k127_2974867_9 NlpC/P60 family - - - 0.000000000000000000000000000000000000000003177 162.0
DPH3_k127_2980491_0 Required for the insertion and or proper folding and or complex formation of integral membrane proteins into the membrane. Involved in integration of membrane proteins that insert both dependently and independently of the Sec translocase complex, as well as at least some lipoproteins. Aids folding of multispanning membrane proteins K03217 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005372 614.0
DPH3_k127_2980491_1 TIGRFAM cell shape determining protein, MreB Mrl family K03569 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005551 597.0
DPH3_k127_2980491_10 Could be involved in insertion of integral membrane proteins into the membrane K08998 - - 0.00000000000000000000000009439 108.0
DPH3_k127_2980491_11 - - - - 0.00000000000000000003988 92.0
DPH3_k127_2980491_13 Belongs to the bacterial ribosomal protein bL34 family K02914 - - 0.000000000001876 67.0
DPH3_k127_2980491_2 Catalyzes the synthesis of beta-nicotinate D- ribonucleotide from nicotinate and 5-phospho-D-ribose 1-phosphate at the expense of ATP K00763 - 6.3.4.21 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001001 571.0
DPH3_k127_2980491_3 Exhibits a very high intrinsic GTPase hydrolysis rate. Involved in the addition of a carboxymethylaminomethyl (cmnm) group at the wobble position (U34) of certain tRNAs, forming tRNA- cmnm(5)s(2)U34 K03650 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001309 502.0
DPH3_k127_2980491_4 PFAM CobQ CobB MinD ParA nucleotide binding domain K03496 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002307 336.0
DPH3_k127_2980491_5 Involved in formation and maintenance of cell shape K03570 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001514 326.0
DPH3_k127_2980491_6 Jag_N K06346 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000008577 299.0
DPH3_k127_2980491_7 Specifically methylates the N7 position of guanine in position 527 of 16S rRNA K03501 GO:0000154,GO:0001510,GO:0003674,GO:0003824,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006139,GO:0006364,GO:0006396,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0008168,GO:0008170,GO:0008173,GO:0008649,GO:0008757,GO:0009451,GO:0009987,GO:0010467,GO:0016070,GO:0016072,GO:0016435,GO:0016740,GO:0016741,GO:0022613,GO:0031167,GO:0032259,GO:0034470,GO:0034641,GO:0034660,GO:0036265,GO:0042254,GO:0043170,GO:0043412,GO:0043414,GO:0044085,GO:0044237,GO:0044238,GO:0044260,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0070043,GO:0070475,GO:0070476,GO:0071704,GO:0071840,GO:0090304,GO:0140098,GO:0140102,GO:1901360 2.1.1.170 0.00000000000000000000000000000000000000001157 162.0
DPH3_k127_2980491_8 ParB-like nuclease domain K03497 - - 0.0000000000000000000000000000000000461 138.0
DPH3_k127_2980491_9 RNaseP catalyzes the removal of the 5'-leader sequence from pre-tRNA to produce the mature 5'-terminus. It can also cleave other RNA substrates such as 4.5S RNA. The protein component plays an auxiliary but essential role in vivo by binding to the 5'-leader sequence and broadening the substrate specificity of the ribozyme K03536 - 3.1.26.5 0.00000000000000000000000003145 113.0
DPH3_k127_301338_0 Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family K03296 - - 0.0 1489.0
DPH3_k127_301338_1 PFAM Outer membrane efflux protein - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009191 469.0
DPH3_k127_301338_2 Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family - - - 0.000000000000000000000000000000000000000000000000002442 185.0
DPH3_k127_3061814_0 PFAM amidohydrolase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004439 317.0
DPH3_k127_3061814_1 Polysaccharide deacetylase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004161 312.0
DPH3_k127_3061814_2 Transporter of a GTP-driven Fe(2 ) uptake system - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000001328 308.0
DPH3_k127_3074336_0 Catalyzes the formation of acetyl phosphate from acetate and ATP. Can also catalyze the reverse reaction K00925 - 2.7.2.1 6.97e-210 659.0
DPH3_k127_3074336_1 phosphate acetyltransferase K00625,K13788 - 2.3.1.8 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001612 460.0
DPH3_k127_3074336_2 COG1670 acetyltransferases, including N-acetylases of ribosomal proteins K09181,K15520 GO:0000166,GO:0003674,GO:0003824,GO:0005488,GO:0008080,GO:0016407,GO:0016410,GO:0016740,GO:0016746,GO:0016747,GO:0017076,GO:0030551,GO:0030552,GO:0030554,GO:0032553,GO:0032555,GO:0032559,GO:0036094,GO:0043167,GO:0043168,GO:0097159,GO:0097367,GO:1901265,GO:1901363 2.3.1.189 0.0000000000000000000000000000000000000000000000000000000000000001497 225.0
DPH3_k127_3074336_3 Pyruvate kinase, barrel domain K00873 - 2.7.1.40 0.000000000000000003509 87.0
DPH3_k127_3095759_0 Involved in the synthesis of meso-diaminopimelate (m-DAP or DL-DAP), required for both lysine and peptidoglycan biosynthesis. Catalyzes the direct conversion of tetrahydrodipicolinate to LL-diaminopimelate K10206 - 2.6.1.83 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000501 376.0
DPH3_k127_3095759_1 Transaldolase is important for the balance of metabolites in the pentose-phosphate pathway K00616 - 2.2.1.2 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001626 349.0
DPH3_k127_3095759_2 CDP-alcohol phosphatidyltransferase K00995 - 2.7.8.5 0.0000000000000000000000000000000000000000000000000000000000000000000000003938 252.0
DPH3_k127_3095759_3 PFAM Lytic K08309 - - 0.0000000000000000000000000000000000000000000000000000000000005994 217.0
DPH3_k127_3095759_4 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase (HPPK) K00950 - 2.7.6.3 0.00000000000000000000000000000000000000000003628 166.0
DPH3_k127_3095759_5 monooxygenase activity - - - 0.000000000000000001631 87.0
DPH3_k127_3095759_6 - - - - 0.00001018 53.0
DPH3_k127_3106373_0 Histidine kinase A domain protein K02482 - 2.7.13.3 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001114 568.0
DPH3_k127_3106373_1 PFAM Methylenetetrahydrofolate reductase K00297,K00547 - 1.5.1.20,2.1.1.10 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002255 537.0
DPH3_k127_3106373_2 PFAM Methylene-tetrahydrofolate reductase C terminal - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001316 374.0
DPH3_k127_3106373_3 His Kinase A (phosphoacceptor) domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003262 312.0
DPH3_k127_3106373_4 PFAM methyl-viologen-reducing hydrogenase delta subunit - - - 0.0000000000000000000000000000000000000000000000000000000000000005612 221.0
DPH3_k127_3106373_5 cheY-homologous receiver domain K07773 - - 0.000000000000000000000000000000000000000000000008542 175.0
DPH3_k127_3141576_0 Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family - - - 0.0 1453.0
DPH3_k127_3141576_1 Conserved region in glutamate synthase - - - 4.307e-296 914.0
DPH3_k127_3141576_2 Ammonium Transporter K03320 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001967 501.0
DPH3_k127_3141576_3 Sigma factor PP2C-like phosphatases K07315 - 3.1.3.3 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003051 322.0
DPH3_k127_3141576_4 Synthesizes selenophosphate from selenide and ATP K01008 - 2.7.9.3 0.0000000000000000000000000000000000000000000000000000000000000000000000002348 252.0
DPH3_k127_3141576_5 Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family K03585 - - 0.000000000005528 68.0
DPH3_k127_3157447_0 Catalyzes the ATP-dependent amination of UTP to CTP with either L-glutamine or ammonia as the source of nitrogen. Regulates intracellular CTP levels through interactions with the four ribonucleotide triphosphates K01937 - 6.3.4.2 2.783e-302 932.0
DPH3_k127_3157447_1 AMP-dependent synthetase and ligase K01895,K08295 - 6.2.1.1,6.2.1.32 3.13e-253 791.0
DPH3_k127_3157447_10 haloacid dehalogenase-like hydrolase K03270 - 3.1.3.45 0.0000000000000000000000000000000000000000000000000000000000000000000000000001096 262.0
DPH3_k127_3157447_11 Domain in cystathionine beta-synthase and other proteins. K04767 - - 0.00000000000000000000000000000000000000000000000000000000000000000004829 237.0
DPH3_k127_3157447_12 Branched-chain amino acid ATP-binding cassette transporter K01995 - - 0.000000000000000000000000000000000000000000000000000007718 204.0
DPH3_k127_3157447_13 OstA-like protein K09774 - - 0.00000000000000000000000000000000000000002971 159.0
DPH3_k127_3157447_14 Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released K03092 - - 0.0000000000000000000000000000000007284 134.0
DPH3_k127_3157447_15 Lipopolysaccharide-assembly, LptC-related - - - 0.0000000000000000000000000000002651 130.0
DPH3_k127_3157447_16 BrnA antitoxin of type II toxin-antitoxin system - - - 0.000000000000000000000001002 107.0
DPH3_k127_3157447_17 Ribonuclease toxin, BrnT, of type II toxin-antitoxin system K09803 - - 0.000000000000000003764 85.0
DPH3_k127_3157447_2 PFAM Major Facilitator Superfamily K08223 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000109 550.0
DPH3_k127_3157447_3 PFAM Extracellular ligand-binding receptor K01999 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002264 445.0
DPH3_k127_3157447_4 Metallo-beta-lactamase superfamily K06897 - 2.5.1.105 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000349 377.0
DPH3_k127_3157447_5 PFAM ABC transporter K06861 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001625 372.0
DPH3_k127_3157447_6 PFAM DAHP synthetase I K01627 - 2.5.1.55 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001691 377.0
DPH3_k127_3157447_7 Belongs to the binding-protein-dependent transport system permease family K01998 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003431 347.0
DPH3_k127_3157447_8 Belongs to the binding-protein-dependent transport system permease family K01997 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000196 323.0
DPH3_k127_3157447_9 ABC transporter related K01996 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000005532 291.0
DPH3_k127_3167750_0 Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family K07787 - - 0.0 1124.0
DPH3_k127_3167750_1 Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family K07798,K15727 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001444 499.0
DPH3_k127_3167750_2 PFAM S23 ribosomal protein - - - 0.00000000000000000000000005552 111.0
DPH3_k127_3185165_0 Alpha-2-Macroglobulin K06894 - - 9.781e-238 746.0
DPH3_k127_3185165_2 Uncharacterized protein conserved in bacteria (DUF2135) K09934 - - 0.000000000000002558 87.0
DPH3_k127_3185165_3 Protein of unknown function (DUF1175) K09934 - - 0.0000000000007 79.0
DPH3_k127_3193169_0 Catalyzes the conversion of inosine 5'-phosphate (IMP) to xanthosine 5'-phosphate (XMP), the first committed and rate- limiting step in the de novo synthesis of guanine nucleotides, and therefore plays an important role in the regulation of cell growth K00088 - 1.1.1.205 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002242 388.0
DPH3_k127_3193169_1 Ppx/GppA phosphatase family K01524 - 3.6.1.11,3.6.1.40 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000008176 292.0
DPH3_k127_3193169_2 TIGRFAM Sua5 YciO YrdC YwlC family protein K07566 - 2.7.7.87 0.00000000000000000000000000000000000000000000009055 170.0
DPH3_k127_3201763_0 Required for chromosome condensation and partitioning K03529 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001258 364.0
DPH3_k127_3201763_1 Belongs to the short-chain dehydrogenases reductases (SDR) family K07124,K15734 - 1.1.1.105 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000002821 282.0
DPH3_k127_3201763_2 Aldehyde dehydrogenase family K00128,K22445 - 1.2.1.3,1.2.99.10 0.000000000000000000000000000000000000000000000000000000000000000000000000006407 258.0
DPH3_k127_3201763_3 Class II aldolase adducin family protein K01628 - 4.1.2.17 0.0000000000000000000000000000000000000000000000000000000000000000001912 235.0
DPH3_k127_3201763_4 Domain of unknown function (DUF4412) - - - 0.00000000000000000000000000000000000000002405 160.0
DPH3_k127_3244423_0 TIGRFAM penicillin-binding protein, 1A family K05366 - 2.4.1.129,3.4.16.4 2.431e-284 895.0
DPH3_k127_3244423_1 PFAM magnesium chelatase K07391 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000981 500.0
DPH3_k127_3244423_2 PFAM magnesium chelatase K07391 - - 0.0000000000000000000000000000000000000000000000000000000000000001198 225.0
DPH3_k127_3244423_3 ATP binding to DnaK triggers the release of the substrate protein, thus completing the reaction cycle. Several rounds of ATP-dependent interactions between DnaJ, DnaK and GrpE are required for fully efficient folding. Also involved, together with DnaK and GrpE, in the DNA replication of plasmids through activation of initiation proteins - - - 0.000000000000000000000000000000000000000000000663 173.0
DPH3_k127_3244423_4 HELICc2 K03722 - 3.6.4.12 0.000000000000000000000000000000000000000000003291 167.0
DPH3_k127_3244423_5 - - - - 0.0000000000000000000000004039 110.0
DPH3_k127_3244423_6 Catalyzes the conversion of (8S)-3',8-cyclo-7,8- dihydroguanosine 5'-triphosphate to cyclic pyranopterin monophosphate (cPMP) K03637 - 4.6.1.17 0.00000000000000006341 92.0
DPH3_k127_3265784_0 Hydrolyzes cAMP to 5'-AMP. Plays an important regulatory role in modulating the intracellular concentration of cAMP, thereby influencing cAMP-dependent processes - - - 4.153e-277 866.0
DPH3_k127_3265784_1 Belongs to the prokaryotic molybdopterin-containing oxidoreductase family - - - 9.021e-196 632.0
DPH3_k127_3265784_2 Mannose-6-phosphate isomerase - - - 0.000000000000000000000000000000000000000000000000000000000000000009544 235.0
DPH3_k127_3265784_3 Catalyzes the transfer of a methyl group from 5- methyltetrahydrofolate to homocysteine resulting in methionine formation - - - 0.0000000000000000000000000005297 115.0
DPH3_k127_3265784_4 PFAM sigma-54 factor interaction domain-containing protein - - - 0.00000000000001408 74.0
DPH3_k127_3265784_5 LemA family K03744 - - 0.0000000000008059 70.0
DPH3_k127_3296926_0 Facilitates transcription termination by a mechanism that involves Rho binding to the nascent RNA, activation of Rho's RNA-dependent ATPase activity, and release of the mRNA from the DNA template K03628 - - 1.512e-234 727.0
DPH3_k127_3296926_1 Protein of unknown function (DUF1385) - - - 0.00000000000000000000000000000000000000000006978 165.0
DPH3_k127_3296926_2 PFAM RimK domain protein ATP-grasp K05844 - - 0.00000000000000000000000000000000000001312 155.0
DPH3_k127_3296926_3 Binds the 23S rRNA K02909 - - 0.000000000000000000000000000001848 121.0
DPH3_k127_3305113_0 Alkyl sulfatase dimerisation - - - 0.0 1127.0
DPH3_k127_3337953_0 Phosphotransferase enzyme family - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002022 489.0
DPH3_k127_3337953_1 Catalyzes the conversion of 3'-phosphate to a 2',3'- cyclic phosphodiester at the end of RNA. The mechanism of action of the enzyme occurs in 3 steps (A) adenylation of the enzyme by ATP K01974 - 6.5.1.4 0.00000000000000000000000000000000000000000000000000000000000000000000000001822 259.0
DPH3_k127_3337953_2 - - - - 0.00002678 49.0
DPH3_k127_3353670_0 DHH family K07462 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002867 614.0
DPH3_k127_3353670_1 ABC-2 family transporter protein K01992 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008239 426.0
DPH3_k127_3353670_2 lysyltransferase activity K07027,K14205 GO:0005575,GO:0005623,GO:0005886,GO:0016020,GO:0044464,GO:0071944 2.3.2.3 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003315 380.0
DPH3_k127_3353670_3 radical SAM domain protein - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000008915 313.0
DPH3_k127_3353670_4 Transglycosylase SLT domain - - - 0.00000000000000000000000000000000000000000000000008676 198.0
DPH3_k127_3353670_5 Uncharacterised ArCR, COG2043 - - - 0.00000000000000256 85.0
DPH3_k127_3353670_6 ABC-2 family transporter protein K01992 - - 0.0000000000003607 70.0
DPH3_k127_3353670_7 Uncharacterized ACR, COG1430 K09005 - - 0.0000000001818 70.0
DPH3_k127_3353670_8 Peptidoglycan-binding domain 1 protein K07260 - 3.4.17.14 0.0001019 55.0
DPH3_k127_3367318_0 ATP-dependent serine protease that mediates the selective degradation of mutant and abnormal proteins as well as certain short-lived regulatory proteins. Required for cellular homeostasis and for survival from DNA damage and developmental changes induced by stress. Degrades polypeptides processively to yield small peptide fragments that are 5 to 10 amino acids long. Binds to DNA in a double-stranded, site-specific manner K01338 - 3.4.21.53 0.0 1248.0
DPH3_k127_3367318_1 ATP-dependent specificity component of the Clp protease. It directs the protease to specific substrates. Can perform chaperone functions in the absence of ClpP K03544 GO:0000166,GO:0003674,GO:0003824,GO:0004176,GO:0005488,GO:0005524,GO:0006508,GO:0006807,GO:0008144,GO:0008150,GO:0008152,GO:0008233,GO:0009056,GO:0009057,GO:0009987,GO:0016462,GO:0016787,GO:0016817,GO:0016818,GO:0016887,GO:0017076,GO:0017111,GO:0019538,GO:0030163,GO:0030554,GO:0032553,GO:0032555,GO:0032559,GO:0035639,GO:0036094,GO:0042623,GO:0043167,GO:0043168,GO:0043170,GO:0044238,GO:0051301,GO:0070011,GO:0071704,GO:0097159,GO:0097367,GO:0140096,GO:1901265,GO:1901363,GO:1901564,GO:1901565,GO:1901575 - 9.746e-238 738.0
DPH3_k127_3367318_2 Cleaves peptides in various proteins in a process that requires ATP hydrolysis. Has a chymotrypsin-like activity. Plays a major role in the degradation of misfolded proteins K01358 - 3.4.21.92 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001253 337.0
DPH3_k127_3367318_3 Involved in protein export. Acts as a chaperone by maintaining the newly synthesized protein in an open conformation. Functions as a peptidyl-prolyl cis-trans isomerase K03545 GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0044424,GO:0044464 - 0.000000000000000000000000000000000000000000000000000000000000005407 224.0
DPH3_k127_3367318_4 - - - - 0.000000000000001917 77.0
DPH3_k127_340137_0 ATPases associated with a variety of cellular activities K16786,K16787 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000001117 289.0
DPH3_k127_340137_1 Belongs to the anaerobic coproporphyrinogen-III oxidase family - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000279 269.0
DPH3_k127_340137_2 spore germination K16928 - - 0.0000000000000000000000000000000000000000000000000002576 194.0
DPH3_k127_3432350_0 PFAM Glycosyl transferase family 2 - - - 0.0 1313.0
DPH3_k127_3432350_1 Phosphatidylethanolamine-binding protein K06910 - - 0.000000000000611 76.0
DPH3_k127_3433780_0 TIGRFAM Carbon-monoxide dehydrogenase, catalytic subunit K00198 - 1.2.7.4 3.509e-300 930.0
DPH3_k127_3433780_1 PFAM CBS domain K03699 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001301 501.0
DPH3_k127_3433780_2 4Fe-4S dicluster domain K00196 - - 0.0000000000000000000000000000000000000000000000000000000002326 210.0
DPH3_k127_3491558_0 COG3547 Transposase and inactivated derivatives - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001991 309.0
DPH3_k127_34972_0 PFAM CO dehydrogenase acetyl-CoA synthase complex beta subunit K14138 - 2.3.1.169 3.395e-269 832.0
DPH3_k127_34972_1 CO dehydrogenase acetyl-CoA synthase delta subunit K00197 - 2.1.1.245 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001563 596.0
DPH3_k127_3522896_0 Belongs to the class-I aminoacyl-tRNA synthetase family K01883 GO:0000166,GO:0003674,GO:0003824,GO:0004812,GO:0004817,GO:0005488,GO:0005524,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006082,GO:0006139,GO:0006399,GO:0006412,GO:0006418,GO:0006423,GO:0006518,GO:0006520,GO:0006725,GO:0006807,GO:0008144,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0016070,GO:0016874,GO:0016875,GO:0017076,GO:0019538,GO:0019752,GO:0030554,GO:0032553,GO:0032555,GO:0032559,GO:0034641,GO:0034645,GO:0034660,GO:0035639,GO:0036094,GO:0043038,GO:0043039,GO:0043043,GO:0043167,GO:0043168,GO:0043170,GO:0043436,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044281,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0071704,GO:0090304,GO:0097159,GO:0097367,GO:0140098,GO:0140101,GO:1901265,GO:1901360,GO:1901363,GO:1901564,GO:1901566,GO:1901576 6.1.1.16 6.366e-235 735.0
DPH3_k127_3522896_1 Involved in the TonB-independent uptake of proteins K03641 GO:0003674,GO:0005215,GO:0006810,GO:0008150,GO:0019534,GO:0022857,GO:0051179,GO:0051234,GO:0055085,GO:1901998 - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004078 529.0
DPH3_k127_3522896_10 PFAM Nitrate reductase gamma subunit K00374 - 1.7.5.1 0.00000000000000000000000000000002894 130.0
DPH3_k127_3522896_11 Regulatory protein, FmdB family - - - 0.00000000000000000008584 91.0
DPH3_k127_3522896_12 - - - - 0.00000000002181 68.0
DPH3_k127_3522896_2 PPIases accelerate the folding of proteins. It catalyzes the cis-trans isomerization of proline imidic peptide bonds in oligopeptides K03767,K03768 - 5.2.1.8 0.000000000000000000000000000000000000000000000000000000000000000000000000003744 256.0
DPH3_k127_3522896_3 Catalyzes the formation of 4-diphosphocytidyl-2-C- methyl-D-erythritol from CTP and 2-C-methyl-D-erythritol 4- phosphate (MEP) K00991 GO:0003674,GO:0003824,GO:0016740,GO:0016772,GO:0016779,GO:0050518,GO:0070567 2.7.7.60 0.00000000000000000000000000000000000000000000000000000000000000000000000177 251.0
DPH3_k127_3522896_4 Involved in the biosynthesis of isopentenyl diphosphate (IPP) and dimethylallyl diphosphate (DMAPP), two major building blocks of isoprenoid compounds. Catalyzes the conversion of 4- diphosphocytidyl-2-C-methyl-D-erythritol 2-phosphate (CDP-ME2P) to 2-C-methyl-D-erythritol 2,4-cyclodiphosphate (ME-CPP) with a corresponding release of cytidine 5-monophosphate (CMP) K01770,K12506 - 2.7.7.60,4.6.1.12 0.00000000000000000000000000000000000000000000000000000000000000000001666 235.0
DPH3_k127_3522896_5 OmpA family K03640 - - 0.00000000000000000000000000000000000000000000000000000000000239 215.0
DPH3_k127_3522896_6 PFAM CBS domain - - - 0.00000000000000000000000000000000000000000000000000000000002104 209.0
DPH3_k127_3522896_7 Dinitrogenase iron-molybdenum cofactor - - - 0.000000000000000000000000000000000000000000000000000004233 196.0
DPH3_k127_3522896_8 Mediates coordination of peptidoglycan synthesis and outer membrane constriction during cell division - - - 0.0000000000000000000000000000000000000000000000000006114 196.0
DPH3_k127_3522896_9 RsbT co-antagonist protein rsbRD N-terminal domain - - - 0.0000000000000000000000000000000000000000006015 163.0
DPH3_k127_353910_0 Acetyltransferase (GNAT) domain K01905,K09181,K22224 - 6.2.1.13 2.445e-225 724.0
DPH3_k127_353910_1 Ion transport 2 domain protein K10716 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009589 495.0
DPH3_k127_353910_2 Staphylococcal nuclease homologue - - - 0.0000000000000000009166 86.0
DPH3_k127_3551424_0 Homocysteine biosynthesis enzyme, sulfur-incorporation - - - 9.028e-214 668.0
DPH3_k127_3551424_1 Catalyzes the synthesis of alpha-ribazole-5'-phosphate from nicotinate mononucleotide (NAMN) and 5,6- dimethylbenzimidazole (DMB) K00768 GO:0003674,GO:0003824,GO:0006725,GO:0006766,GO:0006767,GO:0006807,GO:0008150,GO:0008152,GO:0008939,GO:0009058,GO:0009110,GO:0009235,GO:0009236,GO:0009987,GO:0016740,GO:0016757,GO:0016763,GO:0017144,GO:0018130,GO:0019438,GO:0033013,GO:0033014,GO:0034641,GO:0042364,GO:0044237,GO:0044249,GO:0044271,GO:0044281,GO:0044283,GO:0046483,GO:0051186,GO:0051188,GO:0071704,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576 2.4.2.21 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000411 528.0
DPH3_k127_3551424_10 PFAM 4Fe-4S ferredoxin, iron-sulfur binding domain protein - - - 0.0000000000000000000000000000006639 123.0
DPH3_k127_3551424_2 Domain of unknown function (DUF814) - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002315 377.0
DPH3_k127_3551424_3 Catalyzes the ATP-dependent amidation of the two carboxylate groups at positions a and c of cobyrinate, using either L-glutamine or ammonia as the nitrogen source K02224 - 6.3.5.11,6.3.5.9 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009106 308.0
DPH3_k127_3551424_4 DNA repair enzyme that has both DNA N-glycosylase activity and AP-lyase activity. The DNA N-glycosylase activity releases various damaged pyrimidines from DNA by cleaving the N- glycosidic bond, leaving an AP (apurinic apyrimidinic) site. The AP-lyase activity cleaves the phosphodiester bond 3' to the AP site by a beta-elimination, leaving a 3'-terminal unsaturated sugar and a product with a terminal 5'-phosphate K10773 - 4.2.99.18 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000409 294.0
DPH3_k127_3551424_5 DsrC like protein K11179 GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0044424,GO:0044464 - 0.000000000000000000000000000000000000000000000000000000000000058 214.0
DPH3_k127_3551424_6 PFAM asparagine synthase K06864 - - 0.000000000000000000000000000000000000000000000000000000000007141 217.0
DPH3_k127_3551424_7 PFAM Class III cytochrome C family - - - 0.00000000000000000000000000000000000000000000000000000002076 200.0
DPH3_k127_3551424_9 Thioesterase-like superfamily K07107 - - 0.0000000000000000000000000000000001455 138.0
DPH3_k127_3605063_0 Belongs to the ABC transporter superfamily K02031 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003208 435.0
DPH3_k127_3605063_1 TIGRFAM oligopeptide dipeptide ABC transporter, ATP-binding protein, C-terminal domain K02032,K10823 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002064 422.0
DPH3_k127_3605063_2 Transposase - - - 0.00000000000000000000000000000000000000000000000000000000663 203.0
DPH3_k127_3605063_3 COG3293 Transposase and inactivated derivatives - - - 0.000000000000000000000000000000000000008724 150.0
DPH3_k127_3680743_0 Belongs to the alpha-IPM synthase homocitrate synthase family K01649 - 2.3.3.13 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003321 530.0
DPH3_k127_3680743_1 membrane protein involved in D-alanine K19294 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005258 499.0
DPH3_k127_3680743_2 PFAM amino acid-binding ACT domain protein K03567 - - 0.0000000000000000000000000000000000000000000000000000000000000000001908 233.0
DPH3_k127_3680743_4 SLBB domain K02237 GO:0005575,GO:0005623,GO:0005886,GO:0016020,GO:0044464,GO:0071944 - 0.000000000001041 77.0
DPH3_k127_3709867_0 Pyruvate phosphate dikinase, PEP/pyruvate binding domain K01006 - 2.7.9.1 0.0 1816.0
DPH3_k127_3709867_1 Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released K03092 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002181 552.0
DPH3_k127_3709867_2 Displays ATPase and GTPase activities K06958 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005532 430.0
DPH3_k127_3709867_3 PFAM phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 K02806 - - 0.000000000000000000000000000000000000000000000000000000000000000000004858 236.0
DPH3_k127_3709867_4 Required for dimerization of active 70S ribosomes into 100S ribosomes in stationary phase K05808 - - 0.00000000000000000000000000000000000000000000000000000000000000005319 226.0
DPH3_k127_3709867_5 PTS system fructose IIA component K02793 - 2.7.1.191 0.0000000000000000000000000000000000000000000000000001189 190.0
DPH3_k127_3709867_6 FR47-like protein K03789 - 2.3.1.128 0.0000000000000000000000000000000000000009305 154.0
DPH3_k127_370993_0 Elongation factor Tu domain 2 K06207 - - 0.0 1025.0
DPH3_k127_370993_1 Putative zinc- or iron-chelating domain K06940 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000001724 292.0
DPH3_k127_370993_2 metal cluster binding K06940 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000128 288.0
DPH3_k127_370993_3 Fibronectin type 3 domain - - - 0.0000003972 62.0
DPH3_k127_3735776_0 Belongs to the prokaryotic molybdopterin-containing oxidoreductase family K08352 - 1.8.5.5 0.0 1039.0
DPH3_k127_3735776_1 membrane transporter protein K07090 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009501 584.0
DPH3_k127_3735776_2 PFAM sigma-54 factor interaction domain-containing protein - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001258 438.0
DPH3_k127_3735776_3 4Fe-4S dicluster domain K00124 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000008893 289.0
DPH3_k127_3735776_4 - - - - 0.000000000000000000000000000000000000000000000000000000009016 207.0
DPH3_k127_3735776_5 PFAM Pyridine nucleotide-disulphide oxidoreductase - - - 0.00000000000000000000000000000000001424 139.0
DPH3_k127_3745016_0 One of the primary rRNA binding proteins. Required for association of the 30S and 50S subunits to form the 70S ribosome, for tRNA binding and peptide bond formation. It has been suggested to have peptidyltransferase activity K02886 GO:0002181,GO:0003674,GO:0003676,GO:0003723,GO:0003735,GO:0005198,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0006412,GO:0006518,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0015934,GO:0019538,GO:0022625,GO:0022626,GO:0032991,GO:0034641,GO:0034645,GO:0043043,GO:0043170,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:0071704,GO:0097159,GO:1901363,GO:1901564,GO:1901566,GO:1901576,GO:1990904 - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008051 462.0
DPH3_k127_3745016_1 Binds the lower part of the 30S subunit head. Binds mRNA in the 70S ribosome, positioning it for translation K02982 GO:0002181,GO:0003674,GO:0003735,GO:0005198,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0006412,GO:0006518,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0015935,GO:0019538,GO:0022626,GO:0022627,GO:0032991,GO:0034641,GO:0034645,GO:0043043,GO:0043170,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:0071704,GO:1901564,GO:1901566,GO:1901576,GO:1990904 - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001216 371.0
DPH3_k127_3745016_10 One of the early assembly proteins it binds 23S rRNA. One of the proteins that surrounds the polypeptide exit tunnel on the outside of the ribosome. Forms the main docking site for trigger factor binding to the ribosome K02892 GO:0000027,GO:0003674,GO:0003676,GO:0003723,GO:0003735,GO:0005198,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0006412,GO:0006518,GO:0006807,GO:0006996,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0015934,GO:0016043,GO:0019538,GO:0022607,GO:0022613,GO:0022618,GO:0022625,GO:0022626,GO:0032991,GO:0034622,GO:0034641,GO:0034645,GO:0042254,GO:0042255,GO:0042273,GO:0043043,GO:0043170,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043603,GO:0043604,GO:0043933,GO:0044085,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:0065003,GO:0070925,GO:0071704,GO:0071826,GO:0071840,GO:0097159,GO:1901363,GO:1901564,GO:1901566,GO:1901576,GO:1990904 - 0.0000000000000000000000000000000000006373 142.0
DPH3_k127_3745016_11 One of the primary rRNA binding proteins, it binds specifically to the 5'-end of 16S ribosomal RNA K02961 GO:0003674,GO:0003735,GO:0005198,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0006412,GO:0006518,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0015935,GO:0019538,GO:0022626,GO:0022627,GO:0032991,GO:0034641,GO:0034645,GO:0043043,GO:0043170,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:0071704,GO:1901564,GO:1901566,GO:1901576,GO:1990904 - 0.00000000000000000000000000002153 119.0
DPH3_k127_3745016_12 This protein promotes the GTP-dependent binding of aminoacyl-tRNA to the A-site of ribosomes during protein biosynthesis K02358 - - 0.0000000000000001413 79.0
DPH3_k127_3745016_13 Belongs to the universal ribosomal protein uL29 family K02904 GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0015934,GO:0022625,GO:0022626,GO:0032991,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:1990904 - 0.00000000000009831 74.0
DPH3_k127_3745016_2 One of the primary rRNA binding proteins, it binds directly near the 3'-end of the 23S rRNA, where it nucleates assembly of the 50S subunit K02906 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002331 333.0
DPH3_k127_3745016_3 One of the primary rRNA binding proteins, this protein initially binds near the 5'-end of the 23S rRNA. It is important during the early stages of 50S assembly. It makes multiple contacts with different domains of the 23S rRNA in the assembled 50S subunit and ribosome K02926 GO:0003674,GO:0003676,GO:0003723,GO:0003735,GO:0005198,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0006412,GO:0006518,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0019538,GO:0022626,GO:0032991,GO:0034641,GO:0034645,GO:0043043,GO:0043170,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044424,GO:0044444,GO:0044445,GO:0044464,GO:0071704,GO:0097159,GO:1901363,GO:1901564,GO:1901566,GO:1901576,GO:1990904 - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009062 314.0
DPH3_k127_3745016_4 Binds 23S rRNA and is also seen to make contacts with the A and possibly P site tRNAs K02878 GO:0003674,GO:0003676,GO:0003723,GO:0003735,GO:0005198,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0015934,GO:0019843,GO:0022625,GO:0022626,GO:0032991,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:0097159,GO:1901363,GO:1990904 - 0.0000000000000000000000000000000000000000000000000000000000000000000002758 239.0
DPH3_k127_3745016_5 Binds to 23S rRNA. Forms part of two intersubunit bridges in the 70S ribosome K02874 GO:0003674,GO:0003676,GO:0003723,GO:0003735,GO:0005198,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0015934,GO:0019843,GO:0022625,GO:0022626,GO:0032991,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:0070180,GO:0097159,GO:1901363,GO:1990904 - 0.0000000000000000000000000000000000000000000000000000000000000001913 221.0
DPH3_k127_3745016_6 Involved in the binding of tRNA to the ribosomes K02946 GO:0003674,GO:0003735,GO:0005198,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005840,GO:0006412,GO:0006518,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0015935,GO:0019538,GO:0032991,GO:0034641,GO:0034645,GO:0043043,GO:0043170,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044446,GO:0044464,GO:0071704,GO:1901564,GO:1901566,GO:1901576,GO:1990904 - 0.00000000000000000000000000000000000000000000000006304 179.0
DPH3_k127_3745016_7 Protein S19 forms a complex with S13 that binds strongly to the 16S ribosomal RNA K02965 GO:0000028,GO:0003674,GO:0003735,GO:0005198,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0006996,GO:0008150,GO:0009987,GO:0015935,GO:0016043,GO:0022607,GO:0022613,GO:0022618,GO:0022626,GO:0022627,GO:0032991,GO:0034622,GO:0042254,GO:0042255,GO:0042274,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043933,GO:0044085,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:0065003,GO:0070925,GO:0071826,GO:0071840,GO:1990904 - 0.0000000000000000000000000000000000000000000000004788 175.0
DPH3_k127_3745016_8 One of two assembly initiator proteins, it binds directly to the 5'-end of the 23S rRNA, where it nucleates assembly of the 50S subunit K02895 GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0006412,GO:0006518,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0015934,GO:0019538,GO:0022625,GO:0022626,GO:0032991,GO:0034641,GO:0034645,GO:0043043,GO:0043170,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:0071704,GO:1901564,GO:1901566,GO:1901576,GO:1990904 - 0.000000000000000000000000000000000000000000000003957 173.0
DPH3_k127_3745016_9 its binding is stimulated by other ribosomal proteins, e.g. L4, L17, and L20. It is important during the early stages of 50S assembly. It makes multiple contacts with different domains of the 23S rRNA in the assembled 50S subunit and ribosome (By similarity) K02890 GO:0003674,GO:0003735,GO:0005198,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0015934,GO:0022625,GO:0022626,GO:0032991,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:1990904 - 0.0000000000000000000000000000000000000000001823 162.0
DPH3_k127_3745233_0 Binds directly to 23S rRNA. The L1 stalk is quite mobile in the ribosome, and is involved in E site tRNA release K02863 GO:0000470,GO:0003674,GO:0003676,GO:0003723,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0006139,GO:0006364,GO:0006396,GO:0006412,GO:0006518,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0015934,GO:0016070,GO:0016072,GO:0019538,GO:0022613,GO:0022625,GO:0022626,GO:0032991,GO:0034470,GO:0034641,GO:0034645,GO:0034660,GO:0042254,GO:0042273,GO:0043043,GO:0043170,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043603,GO:0043604,GO:0044085,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:0046483,GO:0071704,GO:0071840,GO:0090304,GO:0097159,GO:1901360,GO:1901363,GO:1901564,GO:1901566,GO:1901576,GO:1990904 - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004296 400.0
DPH3_k127_3745233_1 Participates in transcription elongation, termination and antitermination K02601 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003804 299.0
DPH3_k127_3745233_2 Forms part of the ribosomal stalk which helps the ribosome interact with GTP-bound translation factors K02867 GO:0000027,GO:0003674,GO:0003676,GO:0003723,GO:0003735,GO:0005198,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0006412,GO:0006518,GO:0006807,GO:0006996,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0015934,GO:0016043,GO:0019538,GO:0019843,GO:0022607,GO:0022613,GO:0022618,GO:0022625,GO:0022626,GO:0032991,GO:0034622,GO:0034641,GO:0034645,GO:0042254,GO:0042255,GO:0042273,GO:0043043,GO:0043170,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043603,GO:0043604,GO:0043933,GO:0044085,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:0065003,GO:0070925,GO:0071704,GO:0071826,GO:0071840,GO:0097159,GO:1901363,GO:1901564,GO:1901566,GO:1901576,GO:1990904 - 0.00000000000000000000000000000000000000000000000000000000000000000000000002057 251.0
DPH3_k127_3745233_3 Forms part of the ribosomal stalk, playing a central role in the interaction of the ribosome with GTP-bound translation factors K02864 GO:0003674,GO:0003735,GO:0005198,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0006412,GO:0006518,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0015934,GO:0019538,GO:0022625,GO:0022626,GO:0032991,GO:0034641,GO:0034645,GO:0043043,GO:0043170,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:0071704,GO:1901564,GO:1901566,GO:1901576,GO:1990904 - 0.000000000000000000000000000000000000000000000000000000000000000000000009019 247.0
DPH3_k127_3745233_4 Belongs to the bacterial ribosomal protein bL33 family K02913 - - 0.000000000000000000001094 94.0
DPH3_k127_3745233_5 Forms part of the ribosomal stalk which helps the ribosome interact with GTP-bound translation factors. Is thus essential for accurate translation K02935 - - 0.000000000000000000001526 95.0
DPH3_k127_3745233_6 Essential subunit of the Sec protein translocation channel SecYEG. Clamps together the 2 halves of SecY. May contact the channel plug during translocation K03073 - - 0.0000000000000000006866 90.0
DPH3_k127_3745233_7 This protein promotes the GTP-dependent binding of aminoacyl-tRNA to the A-site of ribosomes during protein biosynthesis K02358 - - 0.0000000000000001413 79.0
DPH3_k127_3750951_0 oxidoreductases (related to aryl-alcohol dehydrogenases) - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001966 352.0
DPH3_k127_3750951_1 Beta-lactamase superfamily domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001506 349.0
DPH3_k127_3750951_2 - - - - 0.0000000000000000000000002473 107.0
DPH3_k127_3794389_0 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006079 477.0
DPH3_k127_3794389_1 Toxic anion resistance protein (TelA) - - - 0.000000000000000000000000002248 116.0
DPH3_k127_3794389_2 - - - - 0.00000000000000000003445 100.0
DPH3_k127_379507_0 PFAM Major Facilitator Superfamily - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007775 548.0
DPH3_k127_379507_1 Transposase DDE domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001439 310.0
DPH3_k127_379507_2 PFAM transposase IS4 family protein - - - 0.00000000000000000000000000000000003383 137.0
DPH3_k127_3798411_0 His Kinase A (phosphoacceptor) domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003828 385.0
DPH3_k127_3798411_1 Methionyl-tRNA formyltransferase K00604 - 2.1.2.9 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007287 346.0
DPH3_k127_3798411_2 Nicotinamidase K08281 - 3.5.1.19 0.000000000000000000000000000000000000000000000000000000000000000009917 231.0
DPH3_k127_3798411_3 diguanylate cyclase - - - 0.0000000000000000000000000000000765 140.0
DPH3_k127_3798411_4 Cache domain K10125 - 2.7.13.3 0.00000000002364 76.0
DPH3_k127_3824835_0 Evidence 3 Function proposed based on presence of conserved amino acid motif, structural feature or limited homology - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000224 306.0
DPH3_k127_3824835_1 Phosphoribosyl transferase domain K02825 - 2.4.2.9 0.00000000000000000000000000000000000000000000000000000000000000000000000002714 253.0
DPH3_k127_3824835_2 PFAM Rubrerythrin - - - 0.000000000000000000000000000000000000000000000000000000000000000000642 232.0
DPH3_k127_3824835_3 Catalyzes the anaerobic formation of alpha-ketobutyrate and ammonia from threonine in a two-step reaction. The first step involved a dehydration of threonine and a production of enamine intermediates (aminocrotonate), which tautomerizes to its imine form (iminobutyrate). Both intermediates are unstable and short- lived. The second step is the nonenzymatic hydrolysis of the enamine imine intermediates to form 2-ketobutyrate and free ammonia. In the low water environment of the cell, the second step is accelerated by RidA K01754 - 4.3.1.19 0.000000000000000000000000000000000000000000000000000000000000000001568 239.0
DPH3_k127_3824835_4 tRNA (Uracil-5-)-methyltransferase K03215 - 2.1.1.190 0.00000000000000000000000000000000000000000000000000000007218 203.0
DPH3_k127_3824835_5 HDOD domain - - - 0.0000000000000000000000000000000000001095 154.0
DPH3_k127_3825809_0 PFAM Domain of unkown function DUF1786 - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008297 474.0
DPH3_k127_3825809_1 protein conserved in bacteria - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003945 433.0
DPH3_k127_3825809_2 Belongs to the ompA family K03286 - - 0.0000000000000000000000000000000000000000000000000004014 193.0
DPH3_k127_3845438_0 Histidine kinase A domain protein - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002275 529.0
DPH3_k127_3845438_1 Ferric uptake regulator family K09825 - - 0.00000000000000000000000000000000000000000000000000000000001059 209.0
DPH3_k127_3845438_2 PFAM thioesterase superfamily - - - 0.000000000000000000000000000000000000000000000000000000001813 204.0
DPH3_k127_3845438_3 Histidine kinase A domain protein - - - 0.0000000000000000000000000000000009809 134.0
DPH3_k127_3864488_0 Catalyzes the attachment of proline to tRNA(Pro) in a two-step reaction proline is first activated by ATP to form Pro- AMP and then transferred to the acceptor end of tRNA(Pro). As ProRS can inadvertently accommodate and process non-cognate amino acids such as alanine and cysteine, to avoid such errors it has two additional distinct editing activities against alanine. One activity is designated as 'pretransfer' editing and involves the tRNA(Pro)-independent hydrolysis of activated Ala-AMP. The other activity is designated 'posttransfer' editing and involves deacylation of mischarged Ala-tRNA(Pro). The misacylated Cys- tRNA(Pro) is not edited by ProRS K01881 - 6.1.1.15 1.128e-272 852.0
DPH3_k127_3864488_1 radical SAM domain protein K03716 - 4.1.99.14 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003438 513.0
DPH3_k127_3864488_10 lyase activity - - - 0.00000000000000000000000000004438 126.0
DPH3_k127_3864488_2 Catalyzes the interconversion of methylthioribose-1- phosphate (MTR-1-P) into methylthioribulose-1-phosphate (MTRu-1- P) K08963 - 5.3.1.23 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005756 483.0
DPH3_k127_3864488_3 PFAM SAICAR synthetase K01923 GO:0003674,GO:0003824,GO:0004639,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006139,GO:0006163,GO:0006164,GO:0006188,GO:0006189,GO:0006725,GO:0006753,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009117,GO:0009123,GO:0009124,GO:0009126,GO:0009127,GO:0009150,GO:0009152,GO:0009156,GO:0009161,GO:0009165,GO:0009167,GO:0009168,GO:0009259,GO:0009260,GO:0009987,GO:0016874,GO:0016879,GO:0016881,GO:0018130,GO:0019438,GO:0019637,GO:0019693,GO:0034641,GO:0034654,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0044424,GO:0044464,GO:0046040,GO:0046390,GO:0046483,GO:0055086,GO:0071704,GO:0072521,GO:0072522,GO:0090407,GO:1901135,GO:1901137,GO:1901293,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576 6.3.2.6 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006274 452.0
DPH3_k127_3864488_4 Peptidase dimerisation domain K01438 - 3.5.1.16 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003945 454.0
DPH3_k127_3864488_5 type VI secretion protein K11900,K11901 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002605 442.0
DPH3_k127_3864488_6 Ligates lysine onto the cytidine present at position 34 of the AUA codon-specific tRNA(Ile) that contains the anticodon CAU, in an ATP-dependent manner. Cytidine is converted to lysidine, thus changing the amino acid specificity of the tRNA from methionine to isoleucine K04075 - 6.3.4.19 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001294 408.0
DPH3_k127_3864488_7 Acetyltransferase (GNAT) domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000008727 263.0
DPH3_k127_3864488_8 ParB domain protein nuclease K03497 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000002778 269.0
DPH3_k127_3864488_9 - - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000002282 263.0
DPH3_k127_386829_0 4Fe-4S ferredoxin iron-sulfur binding domain protein - - - 1.448e-211 667.0
DPH3_k127_386829_1 PFAM sigma-54 factor interaction domain-containing protein - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009616 588.0
DPH3_k127_386829_2 Methylenetetrahydrofolate reductase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001808 350.0
DPH3_k127_3869295_0 PFAM AMP-dependent synthetase and ligase K01897 - 6.2.1.3 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001095 568.0
DPH3_k127_3869295_1 Periplasmic binding protein K01999 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002756 561.0
DPH3_k127_3869295_2 PFAM inner-membrane translocator K01998 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005386 491.0
DPH3_k127_3869295_3 Branched-chain amino acid transport system / permease component K01997 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001289 448.0
DPH3_k127_3869295_4 ABC transporter K01996 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004437 425.0
DPH3_k127_3869295_5 Archaebacterial flagellin - - - 0.0005076 46.0
DPH3_k127_3889956_0 The beta subunit is responsible for the synthesis of L- tryptophan from indole and L-serine K01696 - 4.2.1.20 4.356e-228 714.0
DPH3_k127_3889956_1 FtsX-like permease family K02004 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006849 552.0
DPH3_k127_3889956_10 UTRA domain K03710 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000007454 256.0
DPH3_k127_3889956_11 Tryptophan synthase alpha chain K01695 - 4.2.1.20 0.000000000000000000000000000000000000000000000000000000000000000007062 235.0
DPH3_k127_3889956_12 - - - - 0.00000000000000000000000000000000007761 142.0
DPH3_k127_3889956_2 COG0683 ABC-type branched-chain amino acid transport systems, periplasmic component - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006359 509.0
DPH3_k127_3889956_3 MacB-like periplasmic core domain K02004 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001784 509.0
DPH3_k127_3889956_4 ABC1 family K03688 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009193 447.0
DPH3_k127_3889956_5 Glycosyl transferase 4-like domain K13668 - 2.4.1.346 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001661 401.0
DPH3_k127_3889956_6 Belongs to the binding-protein-dependent transport system permease family K01997 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003148 372.0
DPH3_k127_3889956_7 ABC transporter K01996 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003483 332.0
DPH3_k127_3889956_8 Belongs to the binding-protein-dependent transport system permease family K01998 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001524 311.0
DPH3_k127_3889956_9 COG0411 ABC-type branched-chain amino acid transport systems, ATPase component K01995 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000004706 288.0
DPH3_k127_3922312_0 Part of the Sec protein translocase complex. Interacts with the SecYEG preprotein conducting channel. Has a central role in coupling the hydrolysis of ATP to the transfer of proteins into and across the cell membrane, serving as an ATP-driven molecular motor driving the stepwise translocation of polypeptide chains across the membrane K03070 GO:0000166,GO:0003674,GO:0003824,GO:0005215,GO:0005488,GO:0005524,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005886,GO:0005887,GO:0006810,GO:0008104,GO:0008144,GO:0008150,GO:0008320,GO:0008565,GO:0015031,GO:0015399,GO:0015405,GO:0015440,GO:0015450,GO:0015462,GO:0015833,GO:0016020,GO:0016021,GO:0016462,GO:0016787,GO:0016817,GO:0016818,GO:0016887,GO:0017076,GO:0017111,GO:0022804,GO:0022857,GO:0022884,GO:0030554,GO:0031224,GO:0031226,GO:0031522,GO:0032553,GO:0032555,GO:0032559,GO:0032991,GO:0033036,GO:0033220,GO:0035639,GO:0036094,GO:0042623,GO:0042626,GO:0042886,GO:0042887,GO:0043167,GO:0043168,GO:0043492,GO:0043952,GO:0044424,GO:0044425,GO:0044444,GO:0044459,GO:0044464,GO:0045184,GO:0051179,GO:0051234,GO:0055085,GO:0071702,GO:0071705,GO:0071806,GO:0071944,GO:0097159,GO:0097367,GO:1901265,GO:1901363,GO:1904680 - 0.0 1305.0
DPH3_k127_3922312_1 Catalyzes two activities which are involved in the cyclic version of arginine biosynthesis the synthesis of N- acetylglutamate from glutamate and acetyl-CoA as the acetyl donor, and of ornithine by transacetylation between N(2)-acetylornithine and glutamate K00620 GO:0003674,GO:0003824,GO:0004042,GO:0004358,GO:0006082,GO:0006520,GO:0006525,GO:0006526,GO:0006591,GO:0006592,GO:0006807,GO:0008080,GO:0008150,GO:0008152,GO:0008652,GO:0009058,GO:0009064,GO:0009084,GO:0009987,GO:0016053,GO:0016407,GO:0016410,GO:0016740,GO:0016746,GO:0016747,GO:0019752,GO:0043436,GO:0044237,GO:0044238,GO:0044249,GO:0044281,GO:0044283,GO:0046394,GO:0071704,GO:1901564,GO:1901566,GO:1901576,GO:1901605,GO:1901607 2.3.1.1,2.3.1.35 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001457 441.0
DPH3_k127_3922312_2 Carbohydrate phosphorylase K00688,K16153 - 2.4.1.1,2.4.1.11 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002943 425.0
DPH3_k127_3922312_3 Acetyltransferase (GNAT) domain K00619 - 2.3.1.1 0.00000000000000000000000000000000000000000000000000000008034 198.0
DPH3_k127_3927561_0 ABC transporter K15555 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003183 384.0
DPH3_k127_3927561_1 ABC transporter, phosphonate, periplasmic substrate-binding protein K15553 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008528 347.0
DPH3_k127_3927561_2 Aminotransferase class-III - - - 0.000000000000000000000007303 105.0
DPH3_k127_3960241_0 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). K03406 - - 4.379e-274 867.0
DPH3_k127_3960241_1 catalyzes the demethylation of specific methylglutamate residues introduced into the chemoreceptors (methyl-accepting chemotaxis proteins) by CheR K03412 - 3.1.1.61,3.5.1.44 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006632 626.0
DPH3_k127_3960241_2 NMT1-like family K02051 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007957 445.0
DPH3_k127_3960241_3 ABC transporter K02049 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003533 373.0
DPH3_k127_3960241_4 PFAM CheW domain protein K03408 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000001322 258.0
DPH3_k127_3960241_5 Periplasmic binding protein domain K01999 - - 0.000000000000000000000000000000000000000000000000000000000000000001112 236.0
DPH3_k127_3960241_6 Binding-protein-dependent transport system inner membrane component K02050 - - 0.000000000000000000000000000000000000000000000000000000000000000001413 236.0
DPH3_k127_3960241_7 PFAM response regulator receiver K03413 - - 0.0000000000000000000000000000000000000000000000444 171.0
DPH3_k127_3968920_0 acyl-coa dehydrogenase K00248 - 1.3.8.1 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009277 560.0
DPH3_k127_3968920_1 Belongs to the thiolase family K00626 GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0044424,GO:0044464 2.3.1.9 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002088 548.0
DPH3_k127_3968920_2 Catalyzes the GTP-dependent ribosomal translocation step during translation elongation. During this step, the ribosome changes from the pre-translocational (PRE) to the post- translocational (POST) state as the newly formed A-site-bound peptidyl-tRNA and P-site-bound deacylated tRNA move to the P and E sites, respectively. Catalyzes the coordinated movement of the two tRNA molecules, the mRNA and conformational changes in the ribosome K02355 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002131 454.0
DPH3_k127_3968920_3 Ion channel K10716 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002016 431.0
DPH3_k127_3968920_4 Type I phosphodiesterase / nucleotide pyrophosphatase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001868 362.0
DPH3_k127_3968920_5 Belongs to the enoyl-CoA hydratase isomerase family K01715 - 4.2.1.17 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006968 306.0
DPH3_k127_3976816_0 transferase activity, transferring glycosyl groups - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002496 578.0
DPH3_k127_3976816_1 transferase activity, transferring glycosyl groups - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005792 570.0
DPH3_k127_3976816_2 transferase activity, transferring glycosyl groups - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005307 495.0
DPH3_k127_3976816_3 PFAM SNARE associated Golgi protein - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000001129 289.0
DPH3_k127_3976816_4 Polysaccharide deacetylase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000002753 290.0
DPH3_k127_3999374_0 UvrD/REP helicase N-terminal domain K03582,K16898 - 3.1.11.5,3.6.4.12 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000219 567.0
DPH3_k127_3999374_1 A helicase nuclease that prepares dsDNA breaks (DSB) for recombinational DNA repair. Binds to DSBs and unwinds DNA via a highly rapid and processive ATP-dependent bidirectional helicase activity. Unwinds dsDNA until it encounters a Chi (crossover hotspot instigator) sequence from the 3' direction. Cuts ssDNA a few nucleotides 3' to the Chi site. The properties and activities of the enzyme are changed at Chi. The Chi-altered holoenzyme produces a long 3'-ssDNA overhang and facilitates RecA-binding to the ssDNA for homologous DNA recombination and repair. Holoenzyme degrades any linearized DNA that is unable to undergo homologous recombination. In the holoenzyme this subunit has ssDNA-dependent ATPase and 5'-3' helicase activity. When added to pre-assembled RecBC greatly stimulates nuclease activity and augments holoenzyme processivity. Negatively regulates the RecA-loading ability of RecBCD K03581 - 3.1.11.5 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004424 527.0
DPH3_k127_3999374_2 DNA photolyase K01669 - 4.1.99.3 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005467 443.0
DPH3_k127_4042890_0 Diguanylate cyclase with PAS PAC and GAF sensors - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006622 412.0
DPH3_k127_4042890_1 Succinyl-CoA ligase like flavodoxin domain K01905 - 6.2.1.13 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000142 285.0
DPH3_k127_4042890_2 NmrA-like family - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000003835 261.0
DPH3_k127_4042890_3 tigrfam pas - - - 0.000000000000000000000000000000000000000000001355 183.0
DPH3_k127_4042890_4 diguanylate cyclase - - - 0.000000000000000000003064 108.0
DPH3_k127_4079483_0 PFAM Acyl-CoA dehydrogenase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007402 610.0
DPH3_k127_4079483_1 belongs to the aldehyde dehydrogenase family K00128,K00131,K00135,K00140 - 1.2.1.16,1.2.1.18,1.2.1.20,1.2.1.27,1.2.1.3,1.2.1.79,1.2.1.9 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001295 552.0
DPH3_k127_4079483_2 FIST N domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000009099 306.0
DPH3_k127_4079483_3 Plays a role in the regulation of phosphate uptake K02039 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000002948 296.0
DPH3_k127_4079483_4 Nitroreductase family - - - 0.00000000000000000000000000000000000000000000000000000000000000000000007265 246.0
DPH3_k127_4079483_5 Bacterial protein of unknown function (DUF945) - - - 0.0000000000000000000000000000000000000000000000000000000000000000000003746 257.0
DPH3_k127_4079483_6 Transcriptional regulator, TetR family - - - 0.0000000000000000000000000000000000000000000001458 170.0
DPH3_k127_408312_0 FAD dependent oxidoreductase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003861 508.0
DPH3_k127_408312_1 PFAM sigma-54 factor interaction domain-containing protein - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001783 483.0
DPH3_k127_408312_2 PFAM methyl-viologen-reducing hydrogenase delta subunit - - - 0.000000000000000000000000000000000000000000000000000000000000001789 224.0
DPH3_k127_408312_3 Belongs to the sulfur carrier protein TusA family K04085 - - 0.0000000000000000000000000000000000007115 141.0
DPH3_k127_408312_4 DsrE/DsrF-like family K06039 - - 0.00000000000000000000000000005136 121.0
DPH3_k127_408312_5 PFAM DsrE DsrF-like family K09004 - - 0.0001022 49.0
DPH3_k127_408312_6 Belongs to the sulfur carrier protein TusA family - - - 0.0002967 48.0
DPH3_k127_4095713_0 Catalyzes the acyloin condensation reaction between C atoms 2 and 3 of pyruvate and glyceraldehyde 3-phosphate to yield 1-deoxy-D-xylulose-5-phosphate (DXP) K01662 - 2.2.1.7 5.099e-254 792.0
DPH3_k127_4095713_1 Catalyzes the attachment of serine to tRNA(Ser). Is also able to aminoacylate tRNA(Sec) with serine, to form the misacylated tRNA L-seryl-tRNA(Sec), which will be further converted into selenocysteinyl-tRNA(Sec) K01875 - 6.1.1.11 2.003e-211 663.0
DPH3_k127_4095713_2 FtsJ-like methyltransferase K06442 - 2.1.1.226,2.1.1.227 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000647 304.0
DPH3_k127_4095713_3 TIGRFAM MJ0042 family finger-like protein - - - 0.000000000000000000000000000000000000000000000000000000000000428 219.0
DPH3_k127_4095713_4 Belongs to the purine pyrimidine phosphoribosyltransferase family K00760 - 2.4.2.8 0.00000000000000000000000000000000000000000000000000000000001091 212.0
DPH3_k127_4095713_5 Specifically methylates the pseudouridine at position 1915 (m3Psi1915) in 23S rRNA K00783 - 2.1.1.177 0.00000000000000000000000000000000000000000000008811 174.0
DPH3_k127_4095713_6 bacterial (prokaryotic) histone like domain K05788 - - 0.000000000000000000000000000000000000009664 150.0
DPH3_k127_4095713_7 Acylphosphatase K01512 - 3.6.1.7 0.0000000000000000000000000000001252 126.0
DPH3_k127_4095713_8 Nitrogen-fixing NifU domain protein - - - 0.0000000000000000000000000001433 120.0
DPH3_k127_4123353_0 Type II and III secretion system protein K02453 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001757 617.0
DPH3_k127_4123353_1 Responsible for synthesis of pseudouridine from uracil K06180 - 5.4.99.23 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001592 376.0
DPH3_k127_4123353_2 Large family of predicted nucleotide-binding domains - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007655 317.0
DPH3_k127_4123353_3 CarD-like/TRCF domain K07736 - - 0.000000000000000000000000000000000000000000000000000000000000000001658 231.0
DPH3_k127_4123353_5 Helix-turn-helix domain - - - 0.000000000000000006742 84.0
DPH3_k127_423194_0 Hydrophobe amphiphile Efflux-1 (HAE1) family K03296,K19594 - - 0.0 1258.0
DPH3_k127_423194_1 Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family K19595 - - 0.0000000000000000007337 87.0
DPH3_k127_4234003_0 catalyzes the demethylation of specific methylglutamate residues introduced into the chemoreceptors (methyl-accepting chemotaxis proteins) by CheR K03412 - 3.1.1.61,3.5.1.44 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001707 483.0
DPH3_k127_4234003_1 Probably deamidates glutamine residues to glutamate on methyl-accepting chemotaxis receptors (MCPs), playing an important role in chemotaxis K03411 - 3.5.1.44 0.0000000000000000000000000000000000000000000000000000000000008972 213.0
DPH3_k127_4234003_2 Probably deamidates glutamine residues to glutamate on methyl-accepting chemotaxis receptors (MCPs), playing an important role in chemotaxis K03411 - 3.5.1.44 0.00000000000000000000000000000000000000000000000000000000612 203.0
DPH3_k127_4234003_3 cheY-homologous receiver domain K03413 - - 0.000000000000000000000000000000000000001564 151.0
DPH3_k127_4286209_0 Pyridine nucleotide-disulphide oxidoreductase, dimerisation - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001782 414.0
DPH3_k127_4286209_1 Metallo-beta-lactamase superfamily - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003598 361.0
DPH3_k127_4286209_2 COG1522 Transcriptional regulators - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000003759 276.0
DPH3_k127_4286209_3 - - - - 0.000000000000000000000000001634 113.0
DPH3_k127_4357734_0 Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released. This sigma factor is the primary sigma factor during exponential growth K03086 - - 1.923e-270 844.0
DPH3_k127_4357734_1 RNA polymerase that catalyzes the synthesis of short RNA molecules used as primers for DNA polymerase during DNA replication K02316 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004784 487.0
DPH3_k127_4357734_2 Sigma factor PP2C-like phosphatases - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001632 466.0
DPH3_k127_4357734_3 Probable molybdopterin binding domain K03750 - 2.10.1.1 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002451 330.0
DPH3_k127_4357734_4 NIF3 (NGG1p interacting factor 3) K22391 - 3.5.4.16 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000154 291.0
DPH3_k127_4357734_5 C4-type zinc ribbon domain K07164 - - 0.0000000000000000000000000000000000000000000000000000000000000000000008442 244.0
DPH3_k127_4357734_6 Chalcone isomerase-like - - - 0.000000000000000000000000000000002341 136.0
DPH3_k127_4366712_0 COGs COG4299 conserved - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004885 357.0
DPH3_k127_4366712_1 Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000003191 297.0
DPH3_k127_4366712_2 Bacterial regulatory proteins, tetR family - - - 0.00000000000000000000000000000000000000000004927 168.0
DPH3_k127_440261_0 Alpha-2-Macroglobulin K06894 - - 0.0 1412.0
DPH3_k127_440261_1 serine-type D-Ala-D-Ala carboxypeptidase activity - - - 0.0000000000000000000000000000000000000000000000000000000000006791 218.0
DPH3_k127_4407187_0 Coenzyme F390 K01912 - 6.2.1.30 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000551 533.0
DPH3_k127_4407187_1 ABC transporter K01996 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005628 377.0
DPH3_k127_4407187_2 Mur ligase, middle domain K11754 - 6.3.2.12,6.3.2.17 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001699 368.0
DPH3_k127_4407187_3 branched-chain amino acid K01995 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000204 316.0
DPH3_k127_4407187_4 transport system permease K01998 - - 0.000000000000000000000000000000000004668 138.0
DPH3_k127_4414981_0 3-demethylubiquinone-9 3-O-methyltransferase activity - - - 0.0000000000000000000000005535 117.0
DPH3_k127_4414981_1 EamA-like transporter family - - - 0.0000000000000000000000009543 112.0
DPH3_k127_4414981_2 3-demethylubiquinone-9 3-O-methyltransferase activity K18827 - 2.1.1.294,2.7.1.181 0.00000000000000000000000385 117.0
DPH3_k127_4424057_0 Putative methyltransferase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002337 502.0
DPH3_k127_4424057_1 His Kinase A (phosphoacceptor) domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009391 351.0
DPH3_k127_4424057_2 Represses a number of genes involved in the response to DNA damage (SOS response), including recA and lexA. In the presence of single-stranded DNA, RecA interacts with LexA causing an autocatalytic cleavage which disrupts the DNA-binding part of LexA, leading to derepression of the SOS regulon and eventually DNA repair K01356,K03503 - 3.4.21.88 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009014 316.0
DPH3_k127_44249_0 TIGRFAM Carbon-monoxide dehydrogenase, catalytic subunit K00198 - 1.2.7.4 1.183e-198 623.0
DPH3_k127_44249_1 PFAM FAD-dependent pyridine nucleotide-disulphide oxidoreductase K00362 - 1.7.1.15 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006152 396.0
DPH3_k127_44249_2 4Fe-4S dicluster domain K00196 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008163 306.0
DPH3_k127_445091_0 TIGRFAM Tryptophanyl-tRNA synthetase K01867 - 6.1.1.2 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009338 529.0
DPH3_k127_445091_1 tRNA nucleotidyltransferase poly(A) polymerase K00974 - 2.7.7.72 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003465 435.0
DPH3_k127_445091_2 Peptidase family M50 - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000009413 266.0
DPH3_k127_445091_3 Segregation and condensation protein ScpA K05896 - - 0.00000000000000000000000000001938 123.0
DPH3_k127_4478495_0 Dimerisation domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005902 394.0
DPH3_k127_4478495_1 fumarylacetoacetate (FAA) hydrolase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001533 384.0
DPH3_k127_4506292_0 Catalyzes the activation of phenylacetic acid (PA) to phenylacetyl-CoA (PA-CoA) K01912 - 6.2.1.30 1.143e-244 759.0
DPH3_k127_4506292_1 PFAM Extracellular ligand-binding receptor K01999 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000001423 297.0
DPH3_k127_4506292_2 ACT domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000001228 242.0
DPH3_k127_4506292_3 Protein conserved in bacteria - - - 0.00000000000000000009825 98.0
DPH3_k127_4522738_0 Belongs to the PEP-utilizing enzyme family K01006 - 2.7.9.1 0.0 1347.0
DPH3_k127_4531948_0 Carbamoyl-phosphate synthetase large chain, oligomerisation domain K01955 - 6.3.5.5 0.0 1774.0
DPH3_k127_4531948_1 Carbamoyl-phosphate synthase small chain, CPSase domain K01956 - 6.3.5.5 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003456 604.0
DPH3_k127_4531948_2 Catalyzes the formation of phosphoribosylamine from phosphoribosylpyrophosphate (PRPP) and glutamine K00764 - 2.4.2.14 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001906 429.0
DPH3_k127_4531948_3 Activates KDO (a required 8-carbon sugar) for incorporation into bacterial lipopolysaccharide in Gram-negative bacteria K00979 - 2.7.7.38 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005129 311.0
DPH3_k127_4531948_4 PFAM Glycosyl hydrolase family 3 N terminal domain K01207 - 3.2.1.52 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009706 310.0
DPH3_k127_4531948_5 Ribosomal protein L11 methyltransferase K02687 - - 0.000000000000000000000000000000000000000000004172 168.0
DPH3_k127_4531948_6 Ribosomal protein L11 methyltransferase K02687 - - 0.000000000000000000000000001651 117.0
DPH3_k127_4603544_0 PFAM ABC transporter, transmembrane region - - - 0.0 1154.0
DPH3_k127_4603544_1 In eubacteria ppGpp (guanosine 3'-diphosphate 5-' diphosphate) is a mediator of the stringent response that coordinates a variety of cellular activities in response to changes in nutritional abundance K00951 - 2.7.6.5 2.928e-298 934.0
DPH3_k127_4603544_10 PFAM Uncharacterised ACR, COG1259 K03617,K08999 GO:0005575,GO:0005618,GO:0005623,GO:0005886,GO:0016020,GO:0030312,GO:0044464,GO:0071944 - 0.0000000000000000000000000000000000000000000000000000000000000000000007383 239.0
DPH3_k127_4603544_11 Methionine biosynthesis protein MetW - - - 0.0000000000000000000000000000000000000000000000002515 190.0
DPH3_k127_4603544_12 - - - - 0.000000000000000000000000000000000000000000002727 166.0
DPH3_k127_4603544_13 transporter antisigma-factor antagonist STAS K04749 - - 0.0000000000000000000000000000000000001607 148.0
DPH3_k127_4603544_14 PFAM Cyclic nucleotide-binding - - - 0.00000000000000000000000000000000001064 141.0
DPH3_k127_4603544_15 B-1 B cell differentiation - - - 0.000000000000000000000000004393 115.0
DPH3_k127_4603544_16 Methyltransferase domain - - - 0.0000000000000000000000003476 116.0
DPH3_k127_4603544_17 - - - - 0.00002533 48.0
DPH3_k127_4603544_2 Pyridine nucleotide-disulphide oxidoreductase, dimerisation - - - 1.832e-221 700.0
DPH3_k127_4603544_3 Extracellular solute-binding protein K02027 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001481 591.0
DPH3_k127_4603544_4 Converts 2C-methyl-D-erythritol 2,4-cyclodiphosphate (ME-2,4cPP) into 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate K03526 GO:0003674,GO:0003824,GO:0006081,GO:0006082,GO:0006090,GO:0006629,GO:0006644,GO:0006720,GO:0006793,GO:0006796,GO:0008150,GO:0008152,GO:0008299,GO:0008610,GO:0008654,GO:0009058,GO:0009240,GO:0009987,GO:0016491,GO:0016725,GO:0019288,GO:0019637,GO:0019682,GO:0019752,GO:0032787,GO:0043436,GO:0044237,GO:0044238,GO:0044249,GO:0044255,GO:0044281,GO:0046429,GO:0046490,GO:0052592,GO:0055114,GO:0071704,GO:0090407,GO:1901135,GO:1901576 1.17.7.1,1.17.7.3 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004833 578.0
DPH3_k127_4603544_5 ATPases associated with a variety of cellular activities K05816,K10112 - 3.6.3.20 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001723 442.0
DPH3_k127_4603544_6 Putative exonuclease, RdgC K03554 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003681 438.0
DPH3_k127_4603544_7 - - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002295 383.0
DPH3_k127_4603544_8 Binding-protein-dependent transport system inner membrane component K02025,K10237 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003092 374.0
DPH3_k127_4603544_9 Binding-protein-dependent transport system inner membrane component K02026 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001869 360.0
DPH3_k127_4643621_0 COGs COG4191 Signal transduction histidine kinase regulating C4-dicarboxylate transport system - - - 7.287e-310 965.0
DPH3_k127_4643621_1 two component, sigma54 specific, transcriptional regulator, Fis family K07713,K07714,K07715 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001446 541.0
DPH3_k127_4647495_0 amino acids such as threonine, to avoid such errors, it has a posttransfer editing activity that hydrolyzes mischarged Thr-tRNA(Val) in a tRNA-dependent manner K01873 GO:0003674,GO:0003824,GO:0004812,GO:0004832,GO:0006082,GO:0006139,GO:0006399,GO:0006412,GO:0006418,GO:0006438,GO:0006518,GO:0006520,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0016070,GO:0016874,GO:0016875,GO:0019538,GO:0019752,GO:0034641,GO:0034645,GO:0034660,GO:0043038,GO:0043039,GO:0043043,GO:0043170,GO:0043436,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044281,GO:0046483,GO:0071704,GO:0090304,GO:0140098,GO:0140101,GO:1901360,GO:1901564,GO:1901566,GO:1901576 6.1.1.9 0.0 1301.0
DPH3_k127_4667501_0 Belongs to the ClpX chaperone family - - - 9.034e-251 786.0
DPH3_k127_4667501_1 PFAM ApbE family K09740 - - 0.000000000000000000000000000000000000000000000000000000000000000000156 235.0
DPH3_k127_4667501_2 PFAM Radical SAM K22226 - - 0.000000000000000000000000000000000000001472 147.0
DPH3_k127_4682887_0 General secretion pathway protein F K02455 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000001364 296.0
DPH3_k127_4682887_1 protein secretion K02460 - - 0.00000000000000000000000000000000000000000000000000000000000000004634 231.0
DPH3_k127_4682887_2 protein transport across the cell outer membrane K02246,K02457,K02459,K02672,K08084 - - 0.00000000000000000000000000000000000000002318 158.0
DPH3_k127_4682887_4 type IV pilus modification protein PilV K02458 - - 0.00000000000000000002131 96.0
DPH3_k127_4726772_0 PFAM Major Facilitator Superfamily - - - 0.000000000000000000000000000000000000000000000000000000000000000000001604 239.0
DPH3_k127_4726772_1 HicA toxin of bacterial toxin-antitoxin, - - - 0.00000000000000000000001062 103.0
DPH3_k127_4726772_2 - - - - 0.0000000000000000000001271 99.0
DPH3_k127_4726772_3 PFAM Major Facilitator Superfamily - - - 0.00000000000000004407 80.0
DPH3_k127_4726772_4 TIGRFAM succinate dehydrogenase and fumarate reductase iron-sulfur protein K00240,K00245 - 1.3.5.1,1.3.5.4 0.00000000134 61.0
DPH3_k127_4726772_5 SpoIIAA-like - - - 0.00006222 50.0
DPH3_k127_4726772_6 Domain of unknown function (DUF4395) - - - 0.0008902 49.0
DPH3_k127_4755085_0 Permease MlaE K02066 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000006325 268.0
DPH3_k127_4755085_1 ABC transporter K02065 - - 0.00000000000000000000000000000000000000000003267 167.0
DPH3_k127_4755085_2 This protein is one of the two subunits of integration host factor, a specific DNA-binding protein that functions in genetic recombination as well as in transcriptional and translational control K04764 - - 0.0000000000000000003034 87.0
DPH3_k127_4757302_0 Catalyzes the NADP-dependent rearrangement and reduction of 1-deoxy-D-xylulose-5-phosphate (DXP) to 2-C-methyl-D-erythritol 4-phosphate (MEP) K00099 GO:0000166,GO:0003674,GO:0003824,GO:0005488,GO:0006081,GO:0006082,GO:0006090,GO:0006629,GO:0006644,GO:0006720,GO:0006721,GO:0006793,GO:0006796,GO:0008150,GO:0008152,GO:0008299,GO:0008610,GO:0008654,GO:0009058,GO:0009240,GO:0009987,GO:0016114,GO:0016491,GO:0016614,GO:0016616,GO:0019288,GO:0019637,GO:0019682,GO:0019752,GO:0030145,GO:0030604,GO:0032787,GO:0036094,GO:0043167,GO:0043168,GO:0043169,GO:0043436,GO:0044237,GO:0044238,GO:0044249,GO:0044255,GO:0044281,GO:0046490,GO:0046872,GO:0046914,GO:0048037,GO:0050661,GO:0050662,GO:0051483,GO:0051484,GO:0055114,GO:0070402,GO:0071704,GO:0090407,GO:0097159,GO:1901135,GO:1901265,GO:1901363,GO:1901576 1.1.1.267 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001742 526.0
DPH3_k127_4757302_1 PDZ domain (Also known as DHR or GLGF) K11749 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004553 416.0
DPH3_k127_4757302_2 Catalyzes the reversible phosphorylation of UMP to UDP K09903 GO:0003674,GO:0003824,GO:0006139,GO:0006725,GO:0006753,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0009041,GO:0009058,GO:0009117,GO:0009123,GO:0009165,GO:0009987,GO:0015949,GO:0016301,GO:0016310,GO:0016740,GO:0016772,GO:0016776,GO:0018130,GO:0019205,GO:0019438,GO:0019637,GO:0034641,GO:0034654,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0046483,GO:0046940,GO:0050145,GO:0055086,GO:0071704,GO:0090407,GO:1901293,GO:1901360,GO:1901362,GO:1901576 2.7.4.22 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003875 372.0
DPH3_k127_4757302_3 Associates with the EF-Tu.GDP complex and induces the exchange of GDP to GTP. It remains bound to the aminoacyl-tRNA.EF- Tu.GTP complex up to the GTP hydrolysis stage on the ribosome K02357 GO:0003674,GO:0003676,GO:0003723,GO:0003746,GO:0005488,GO:0006412,GO:0006414,GO:0006518,GO:0006807,GO:0008135,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0019538,GO:0034641,GO:0034645,GO:0043043,GO:0043170,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0071704,GO:0097159,GO:1901363,GO:1901564,GO:1901566,GO:1901576 - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004734 326.0
DPH3_k127_4757302_4 Catalyzes the condensation of isopentenyl diphosphate (IPP) with allylic pyrophosphates generating different type of terpenoids K00806 - 2.5.1.31 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002643 328.0
DPH3_k127_4757302_5 Belongs to the universal ribosomal protein uS2 family K02967 GO:0003674,GO:0003735,GO:0005198,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0006412,GO:0006518,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0015935,GO:0019538,GO:0022626,GO:0022627,GO:0032991,GO:0034641,GO:0034645,GO:0043043,GO:0043170,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:0071704,GO:1901564,GO:1901566,GO:1901576,GO:1990904 - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000002197 286.0
DPH3_k127_4757302_6 Belongs to the CDS family K00981 - 2.7.7.41 0.00000000000000000000000000000000000000000000000000000000000000000000000001421 260.0
DPH3_k127_4757302_7 Responsible for the release of ribosomes from messenger RNA at the termination of protein biosynthesis. May increase the efficiency of translation by recycling ribosomes from one round of translation to another K02838 GO:0002181,GO:0002184,GO:0003674,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006412,GO:0006415,GO:0006518,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0016043,GO:0019538,GO:0022411,GO:0032984,GO:0034641,GO:0034645,GO:0043021,GO:0043023,GO:0043043,GO:0043170,GO:0043603,GO:0043604,GO:0043624,GO:0043933,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044424,GO:0044464,GO:0044877,GO:0071704,GO:0071840,GO:1901564,GO:1901566,GO:1901576 - 0.00000000000000000000000000000000000000000000000000000000000000005784 227.0
DPH3_k127_4757302_8 Glycoprotease family K01409,K14742 - 2.3.1.234 0.0000000000000000000000000000000000000000000000000009007 187.0
DPH3_k127_4762455_0 Part of the ABC transporter complex PstSACB involved in phosphate import. Responsible for energy coupling to the transport system K02036 - 3.6.3.27 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006496 400.0
DPH3_k127_4762455_1 Part of the ABC transporter complex PstSACB involved in phosphate import. Responsible for energy coupling to the transport system - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003847 387.0
DPH3_k127_4800001_0 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain - - - 2.41e-201 639.0
DPH3_k127_4800001_1 PDZ domain (Also known as DHR or GLGF) K03797 - 3.4.21.102 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002046 588.0
DPH3_k127_4800001_10 Belongs to the UPF0296 family K09777 - - 0.00000000000000000000000000000000000000009638 154.0
DPH3_k127_4800001_11 RNA recognition motif - - - 0.00000000000000000000000000000003777 131.0
DPH3_k127_4800001_12 - - - - 0.000000000004137 74.0
DPH3_k127_4800001_13 Catalyzes the ADP transfer from ATP to D-glycero-beta-D- manno-heptose 1-phosphate, yielding ADP-D-glycero-beta-D-manno- heptose K03272,K21344 GO:0000271,GO:0003674,GO:0003824,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005975,GO:0005976,GO:0006629,GO:0006793,GO:0006796,GO:0008150,GO:0008152,GO:0008219,GO:0008610,GO:0008653,GO:0009058,GO:0009059,GO:0009103,GO:0009244,GO:0009311,GO:0009312,GO:0009987,GO:0012501,GO:0016051,GO:0016301,GO:0016310,GO:0016740,GO:0016772,GO:0016779,GO:0019200,GO:0033692,GO:0033785,GO:0033786,GO:0034637,GO:0034645,GO:0043170,GO:0044237,GO:0044238,GO:0044249,GO:0044255,GO:0044260,GO:0044262,GO:0044264,GO:0044424,GO:0044444,GO:0044464,GO:0046401,GO:0046835,GO:0070566,GO:0071704,GO:1901135,GO:1901137,GO:1901576,GO:1903509 2.7.1.167,2.7.7.70 0.00000005197 55.0
DPH3_k127_4800001_2 TIGRFAM hydrolase, TatD family K03424 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000006673 300.0
DPH3_k127_4800001_3 Pyridoxal 5'-phosphate (PLP)-binding protein, which is involved in PLP homeostasis K06997 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000005759 295.0
DPH3_k127_4800001_4 Domain of unknown function (DUF1732) - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000009034 287.0
DPH3_k127_4800001_5 Belongs to the class IV-like SAM-binding methyltransferase superfamily. RNA methyltransferase TrmH family K03218 - 2.1.1.185 0.00000000000000000000000000000000000000000000000000000000000000000000000001312 259.0
DPH3_k127_4800001_6 Essential for recycling GMP and indirectly, cGMP K00942 GO:0003674,GO:0003824,GO:0004385,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006139,GO:0006163,GO:0006725,GO:0006753,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009116,GO:0009117,GO:0009119,GO:0009123,GO:0009126,GO:0009132,GO:0009135,GO:0009150,GO:0009161,GO:0009165,GO:0009167,GO:0009179,GO:0009185,GO:0009259,GO:0009987,GO:0016301,GO:0016310,GO:0016740,GO:0016772,GO:0016776,GO:0018130,GO:0019205,GO:0019438,GO:0019637,GO:0019693,GO:0034641,GO:0034654,GO:0042278,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0044424,GO:0044444,GO:0044464,GO:0046037,GO:0046128,GO:0046483,GO:0046710,GO:0046940,GO:0050145,GO:0055086,GO:0071704,GO:0072521,GO:0090407,GO:1901068,GO:1901135,GO:1901293,GO:1901360,GO:1901362,GO:1901564,GO:1901576,GO:1901657 2.7.4.8 0.00000000000000000000000000000000000000000000000000000000000000000000001409 248.0
DPH3_k127_4800001_7 Domain of unknown function (DUF4416) - - - 0.00000000000000000000000000000000000000000000000000000000000000000001166 237.0
DPH3_k127_4800001_8 Divergent polysaccharide deacetylase K09798 - - 0.00000000000000000000000000000000000000000000000000000000000000001275 244.0
DPH3_k127_4800001_9 Maf-like protein K06287 - - 0.00000000000000000000000000000000000000000000000000000001565 204.0
DPH3_k127_4802624_0 NAD(P)H-binding K01784,K12448 - 5.1.3.2,5.1.3.5 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000332 417.0
DPH3_k127_4802624_1 PFAM Glycosyl transferase family 2 - - - 0.00000000000000000000000000000000000000000000000000000000000004774 223.0
DPH3_k127_4802624_2 Glycosyltransferase family 87 - - - 0.00000000000000000000000000000000000000000001512 177.0
DPH3_k127_4814991_0 Bacterial extracellular solute-binding protein K11069 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006305 427.0
DPH3_k127_4814991_1 Part of the ABC transporter complex PotABCD involved in spermidine putrescine import. Responsible for energy coupling to the transport system K02052,K11072 - 3.6.3.31 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005982 359.0
DPH3_k127_4814991_2 PFAM binding-protein-dependent transport systems inner membrane component K11071 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003463 318.0
DPH3_k127_4814991_3 Binding-protein-dependent transport system inner membrane component K11070 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008542 319.0
DPH3_k127_4814991_4 Part of the ABC transporter complex PotABCD involved in spermidine putrescine import. Responsible for energy coupling to the transport system K02052,K11072 - 3.6.3.31 0.0000000000000000000002563 98.0
DPH3_k127_4814991_5 HicB_like antitoxin of bacterial toxin-antitoxin system - - - 0.0000000000000000002699 93.0
DPH3_k127_4814991_6 mRNA binding K07339 - - 0.0000000002722 62.0
DPH3_k127_4814991_7 HicA toxin of bacterial toxin-antitoxin, - - - 0.00001336 48.0
DPH3_k127_4819103_0 PFAM Extracellular ligand-binding receptor - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002901 503.0
DPH3_k127_4819103_1 Heterodisulfide reductase subunit B K03389 - 1.8.7.3,1.8.98.4,1.8.98.5,1.8.98.6 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003064 359.0
DPH3_k127_4819103_2 4Fe-4S ferredoxin iron-sulfur binding domain protein K03388 - 1.8.7.3,1.8.98.4,1.8.98.5,1.8.98.6 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000359 326.0
DPH3_k127_4819103_3 4Fe-4S dicluster domain K03390,K16887 - 1.8.7.3,1.8.98.4,1.8.98.5,1.8.98.6 0.000000000000000000000000000000000000000000000000000000000000000000000000001454 258.0
DPH3_k127_4819103_4 Function proposed based on presence of conserved amino acid motif, structural feature or limited homology - - - 0.000000000000000000000000000000000000000004267 175.0
DPH3_k127_4827962_0 Required for formation of the rod structure of the flagellar apparatus. Together with FliI and FliH, may constitute the export apparatus of flagellin K02400 - - 1.662e-233 741.0
DPH3_k127_4827962_1 Assembles around the rod to form the L-ring and probably protects the motor basal body from shearing forces during rotation K02394 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004227 393.0
DPH3_k127_4827962_10 Chaperone for flagella basal body P-ring formation K02386 - - 0.0000000004501 71.0
DPH3_k127_4827962_11 Membrane MotB of proton-channel complex MotA/MotB K02557 - - 0.00001567 53.0
DPH3_k127_4827962_12 - - - - 0.0001116 51.0
DPH3_k127_4827962_2 NUBPL iron-transfer P-loop NTPase K04562 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006867 340.0
DPH3_k127_4827962_3 RNA polymerase sigma factor K02405 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000001009 291.0
DPH3_k127_4827962_4 Belongs to the flagella basal body rod proteins family K02392 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000004515 280.0
DPH3_k127_4827962_5 PFAM GTP-binding signal recognition particle SRP54 G- domain K02404 - - 0.0000000000000000000000000000000000000000000000000000001411 208.0
DPH3_k127_4827962_6 basal body rod protein K02391,K02392 - - 0.0000000000000000000000000000000000000005002 158.0
DPH3_k127_4827962_7 Assembles around the rod to form the L-ring and probably protects the motor basal body from shearing forces during rotation K02393 - - 0.0000000000000000000000000000000000003994 152.0
DPH3_k127_4827962_8 Flagellar motor protein K02557 - - 0.000000000000000000003422 104.0
DPH3_k127_4827962_9 Required for formation of the rod structure in the basal body of the flagellar apparatus. Together with FliI and FliH, may constitute the export apparatus of flagellin K02401 - - 0.000000000000006638 75.0
DPH3_k127_4880968_0 Pyruvate:ferredoxin oxidoreductase core domain II K03737 - 1.2.7.1 0.0 1460.0
DPH3_k127_490006_0 Belongs to the aldehyde dehydrogenase family K00294 - 1.2.1.88 5.222e-320 1004.0
DPH3_k127_490006_1 Uncharacterised protein family (UPF0182) K09118 - - 1.279e-304 963.0
DPH3_k127_490006_2 Elongation factor Tu domain 2 K02355 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004018 351.0
DPH3_k127_4929264_0 CheB methylesterase K03412 - 3.1.1.61,3.5.1.44 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002859 459.0
DPH3_k127_4929264_1 Domain of unknown function (DUF4388) K03412 - 3.1.1.61,3.5.1.44 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006619 389.0
DPH3_k127_4929264_2 PFAM glycosyl transferase group 1 K12994 - 2.4.1.349 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003592 380.0
DPH3_k127_4929264_3 ADP-ribosylation factor family K06883 GO:0008150,GO:0032879,GO:0032880,GO:0050789,GO:0065007 - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003404 318.0
DPH3_k127_4929264_4 PFAM Roadblock LC7 - - - 0.000000000000000000000000000000000000000000001529 168.0
DPH3_k127_497591_0 Thiamine pyrophosphate enzyme, central K01652 - 2.2.1.6 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007792 398.0
DPH3_k127_497591_1 Involved in the biosynthesis of branched-chain amino acids (BCAA). Catalyzes an alkyl-migration followed by a ketol- acid reduction of (S)-2-acetolactate (S2AL) to yield (R)-2,3- dihydroxy-isovalerate. In the isomerase reaction, S2AL is rearranged via a Mg-dependent methyl migration to produce 3- hydroxy-3-methyl-2-ketobutyrate (HMKB). In the reductase reaction, this 2-ketoacid undergoes a metal-dependent reduction by NADPH to yield (R)-2,3-dihydroxy-isovalerate K00053 - 1.1.1.86 0.000000000000000000000000000000000000000000000000000000000000000000000000001137 256.0
DPH3_k127_497591_2 TIGRFAM Acetolactate synthase, small subunit K01653 - 2.2.1.6 0.0000000000000000000000000000000000000000000000000000000000000000000033 242.0
DPH3_k127_5000924_0 Catalyzes the synthesis of GMP from XMP K01951 GO:0003674,GO:0003824,GO:0003921,GO:0003922,GO:0006139,GO:0006163,GO:0006164,GO:0006177,GO:0006725,GO:0006753,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009116,GO:0009117,GO:0009119,GO:0009123,GO:0009124,GO:0009126,GO:0009127,GO:0009150,GO:0009152,GO:0009156,GO:0009161,GO:0009163,GO:0009165,GO:0009167,GO:0009168,GO:0009259,GO:0009260,GO:0009987,GO:0016874,GO:0016879,GO:0016884,GO:0018130,GO:0019438,GO:0019637,GO:0019693,GO:0034404,GO:0034641,GO:0034654,GO:0042278,GO:0042451,GO:0042455,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0044283,GO:0046037,GO:0046128,GO:0046129,GO:0046390,GO:0046483,GO:0055086,GO:0071704,GO:0072521,GO:0072522,GO:0090407,GO:1901068,GO:1901070,GO:1901135,GO:1901137,GO:1901293,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576,GO:1901657,GO:1901659 6.3.5.2 1.656e-281 871.0
DPH3_k127_5000924_1 Catalyzes the conversion of inosine 5'-phosphate (IMP) to xanthosine 5'-phosphate (XMP), the first committed and rate- limiting step in the de novo synthesis of guanine nucleotides, and therefore plays an important role in the regulation of cell growth K00088 - 1.1.1.205 0.00000000000000000000000000000000000000000000000000003292 188.0
DPH3_k127_503327_0 PFAM iron-containing alcohol dehydrogenase K00005 - 1.1.1.6 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008513 574.0
DPH3_k127_503327_1 Major facilitator Superfamily K03762,K12226 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000002325 302.0
DPH3_k127_503327_2 PFAM Enoyl-CoA hydratase isomerase K11264 - 4.1.1.41 0.0000000000000000000000000000000000000000000000005394 176.0
DPH3_k127_5074356_0 ATPases associated with a variety of cellular activities K16786,K16787 - - 0.0000000000000000000000000000000000000000007078 163.0
DPH3_k127_5074356_1 Cobalt transport protein K16785 - - 0.0000000000000000000000000000000000001947 151.0
DPH3_k127_5074356_2 ATPases associated with a variety of cellular activities K02049 - - 0.0000000000000000004398 88.0
DPH3_k127_5081508_0 Sigma-54 factor interaction domain-containing protein K02481,K07712,K07713 - - 0.0000000000000000000000000000000000000000000000000000000001879 220.0
DPH3_k127_5081508_1 PFAM ATP-binding region ATPase domain protein K10819 - 2.7.13.3 0.000000000000000000000000000000000000000000000000000007405 194.0
DPH3_k127_5093576_0 Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family K19595 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001422 403.0
DPH3_k127_5093576_1 DsrE/DsrF/DrsH-like family - - - 0.000000000000000000000000000000000000001136 149.0
DPH3_k127_5105434_0 RmlD substrate binding domain K01711 - 4.2.1.47 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000162 403.0
DPH3_k127_5105434_1 PFAM Glycosyl transferase family 2 - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006271 397.0
DPH3_k127_5105434_2 Belongs to the cation diffusion facilitator (CDF) transporter (TC 2.A.4) family K13283 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002914 367.0
DPH3_k127_5105434_3 Glycosyltransferase Family 4 - - - 0.0000000000000000000000000000000003614 146.0
DPH3_k127_5105434_4 4-amino-4-deoxy-L-arabinose transferase and related glycosyltransferases of PMT family - - - 0.00005834 56.0
DPH3_k127_5127104_0 it binds specifically double-stranded DNA at a 9 bp consensus (dnaA box) 5'-TTATC CA A CA A-3'. DnaA binds to ATP and to acidic phospholipids K02313 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001781 542.0
DPH3_k127_5127104_1 Belongs to the D-alanine--D-alanine ligase family K01921 - 6.3.2.4 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002987 463.0
DPH3_k127_5127104_2 His Kinase A (phosphoacceptor) domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003428 392.0
DPH3_k127_5127104_3 ABC-type transport system involved in resistance to organic solvents, ATPase component K02065 - - 0.000000000000000000000000000000000000000000000000000000000000000004191 231.0
DPH3_k127_5127104_4 Mammalian cell entry related domain protein K02067,K06192 - - 0.0000000000000000000000000000000000000000002877 170.0
DPH3_k127_5127104_5 PFAM Metal-dependent phosphohydrolase, HD - - - 0.0000000000000000000000000000000000000000004808 165.0
DPH3_k127_5127104_6 Carboxymuconolactone decarboxylase family - - - 0.0000000000000000000000000000000000006632 141.0
DPH3_k127_5127104_7 Protein conserved in bacteria K18480 - - 0.000000000000000000000000001486 120.0
DPH3_k127_5127880_0 DNA ligase that catalyzes the formation of phosphodiester linkages between 5'-phosphoryl and 3'-hydroxyl groups in double-stranded DNA using NAD as a coenzyme and as the energy source for the reaction. It is essential for DNA replication and repair of damaged DNA K01972 GO:0003674,GO:0003824,GO:0003909,GO:0003911,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006139,GO:0006259,GO:0006266,GO:0006281,GO:0006284,GO:0006288,GO:0006725,GO:0006807,GO:0006950,GO:0006974,GO:0008150,GO:0008152,GO:0009987,GO:0016874,GO:0016886,GO:0033554,GO:0034641,GO:0043170,GO:0044237,GO:0044238,GO:0044260,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0050896,GO:0051103,GO:0051716,GO:0071704,GO:0090304,GO:0140097,GO:1901360 6.5.1.2 6.887e-267 837.0
DPH3_k127_5127880_1 Involved in the restart of stalled replication forks. Recognizes and binds the arrested nascent DNA chain at stalled replication forks. It can open the DNA duplex, via its helicase activity, and promote assembly of the primosome and loading of the major replicative helicase DnaB onto DNA K04066 - - 9.08e-254 807.0
DPH3_k127_5127880_2 Belongs to the class-II pyridine nucleotide-disulfide oxidoreductase family K00384 - 1.8.1.9 2.664e-194 613.0
DPH3_k127_5127880_3 Phosphorylase superfamily - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000003743 276.0
DPH3_k127_5127880_4 Acylphosphatase K01512 - 3.6.1.7 0.0000000000000000000000000000000004218 133.0
DPH3_k127_5127880_5 Histone-like DNA-binding protein which is capable of wrapping DNA to stabilize it, and thus to prevent its denaturation under extreme environmental conditions K03530 - - 0.00000000000000000000000000000004376 127.0
DPH3_k127_5128718_0 arylsulfatase A - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006537 326.0
DPH3_k127_5137357_0 Involved in the biosynthesis of the central metabolite phospho-alpha-D-ribosyl-1-pyrophosphate (PRPP) via the transfer of pyrophosphoryl group from ATP to 1-hydroxyl of ribose-5-phosphate (Rib-5-P) K00948 - 2.7.6.1 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002206 532.0
DPH3_k127_5137357_1 Permease family - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001331 395.0
DPH3_k127_5137357_2 Required for formate dehydrogenase (FDH) activity. Acts as a sulfur carrier protein that transfers sulfur from IscS to the molybdenum cofactor prior to its insertion into FDH K02379 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005964 318.0
DPH3_k127_5137357_3 NUDIX domain K03574 - 3.6.1.55 0.00000000000000000000000000000000000000000000000000000000002517 209.0
DPH3_k127_5137357_5 PilZ domain - - - 0.00000000000000000000000001979 111.0
DPH3_k127_5157286_0 PFAM Methyltransferase type 11 - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005138 428.0
DPH3_k127_5157286_1 PFAM ketose-bisphosphate aldolase class-II - - - 0.000000000000000000000000000000000000000000000000000000000000000000006464 248.0
DPH3_k127_5162839_0 PFAM Glycosyl transferases group 1 K13057 - 2.4.1.245 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000141 400.0
DPH3_k127_5162839_1 transferase activity, transferring glycosyl groups - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000002214 283.0
DPH3_k127_5162839_2 transferase activity, transferring glycosyl groups - - - 0.0000000000000000000001958 98.0
DPH3_k127_5190494_0 Histidine kinase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001627 419.0
DPH3_k127_5190494_1 response regulator, receiver - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000005881 287.0
DPH3_k127_5198273_0 TIGRFAM formate dehydrogenase, alpha subunit K00123 - 1.17.1.9 0.0 1364.0
DPH3_k127_5198273_1 4Fe-4S dicluster domain K00124 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001978 375.0
DPH3_k127_5198273_2 Molybdopterin oxidoreductase Fe4S4 domain K00123 - 1.17.1.9 0.0000000000000000000000000000000000000007663 148.0
DPH3_k127_5198273_3 Necessary for formate dehydrogenase activity K02380 - - 0.0000000000000004993 85.0
DPH3_k127_5205788_0 The RuvA-RuvB complex in the presence of ATP renatures cruciform structure in supercoiled DNA with palindromic sequence, indicating that it may promote strand exchange reactions in homologous recombination. RuvAB is a helicase that mediates the Holliday junction migration by localized denaturation and reannealing K03551 - 3.6.4.12 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004795 548.0
DPH3_k127_5205788_1 transcriptional regulatory protein - GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0044424,GO:0044444,GO:0044464 - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004323 380.0
DPH3_k127_5205788_2 Uncharacterised ArCR, COG2043 - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002242 342.0
DPH3_k127_5205788_3 4Fe-4S dicluster domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008085 325.0
DPH3_k127_5205788_4 Specifically methylates the uridine in position 2552 of 23S rRNA at the 2'-O position of the ribose in the fully assembled 50S ribosomal subunit K02427 - 2.1.1.166 0.00000000000000000000000000000000000000000000000000000000000000000000000000000001431 273.0
DPH3_k127_5205788_5 The RuvA-RuvB complex in the presence of ATP renatures cruciform structure in supercoiled DNA with palindromic sequence, indicating that it may promote strand exchange reactions in homologous recombination. RuvAB is a helicase that mediates the Holliday junction migration by localized denaturation and reannealing. RuvA stimulates, in the presence of DNA, the weak ATPase activity of RuvB K03550 - 3.6.4.12 0.0000000000000000000000000000000000000000000000000000000000000000000373 239.0
DPH3_k127_5205788_6 Appr-1'-p processing enzyme - - - 0.0000000000000000000000000000000000000000000000000000000002166 205.0
DPH3_k127_5205788_7 Nuclease that resolves Holliday junction intermediates in genetic recombination. Cleaves the cruciform structure in supercoiled DNA by nicking to strands with the same polarity at sites symmetrically opposed at the junction in the homologous arms and leaves a 5'-terminal phosphate and a 3'-terminal hydroxyl group K01159 GO:0000725,GO:0003674,GO:0003824,GO:0004518,GO:0004519,GO:0004520,GO:0004536,GO:0005575,GO:0005622,GO:0005623,GO:0006139,GO:0006259,GO:0006260,GO:0006261,GO:0006281,GO:0006310,GO:0006725,GO:0006807,GO:0006950,GO:0006974,GO:0008150,GO:0008152,GO:0008821,GO:0009058,GO:0009059,GO:0009987,GO:0016787,GO:0016788,GO:0016889,GO:0016894,GO:0031297,GO:0032991,GO:0033554,GO:0034641,GO:0034645,GO:0043170,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044424,GO:0044464,GO:0045005,GO:0046483,GO:0048476,GO:0050896,GO:0051716,GO:0071704,GO:0071932,GO:0090304,GO:0090305,GO:0140097,GO:1901360,GO:1901576 3.1.22.4 0.00000000000000000000000000000000000000000000000000003468 192.0
DPH3_k127_5205788_8 PFAM Aldehyde dehydrogenase K15038 - 1.2.1.76 0.0000000000000000000000000000000000005097 155.0
DPH3_k127_5205788_9 PFAM cytochrome c class III - - - 0.000000000000000005374 89.0
DPH3_k127_5264932_0 Peptidase family U32 K08303 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007809 529.0
DPH3_k127_5264932_1 PFAM ATP-binding region ATPase domain protein - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001012 387.0
DPH3_k127_5264932_2 CDP-archaeol synthase K07098 - - 0.00000000000000000000000000000000000000000000000000000000000000000000002244 250.0
DPH3_k127_5269355_0 Catalyzes the conversion of dihydroorotate to orotate K00254,K02823,K17828 GO:0003674,GO:0003824,GO:0004152,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006139,GO:0006206,GO:0006207,GO:0006220,GO:0006221,GO:0006725,GO:0006753,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009112,GO:0009117,GO:0009165,GO:0009218,GO:0009220,GO:0009259,GO:0009260,GO:0009987,GO:0016491,GO:0016627,GO:0016635,GO:0018130,GO:0019438,GO:0019637,GO:0019693,GO:0019856,GO:0034641,GO:0034654,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0044424,GO:0044464,GO:0046112,GO:0046390,GO:0046483,GO:0055086,GO:0055114,GO:0071704,GO:0072527,GO:0072528,GO:0090407,GO:1901135,GO:1901137,GO:1901293,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576 1.3.1.14,1.3.5.2 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003011 458.0
DPH3_k127_5269355_1 Iron-sulfur cluster binding domain of dihydroorotate dehydrogenase B K02823 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000019 321.0
DPH3_k127_5269355_2 Multi-copper polyphenol oxidoreductase laccase K05810 - - 0.0000000000000000000000000000000000000000000000000000000000000005796 223.0
DPH3_k127_5269355_3 PFAM NADPH-dependent FMN reductase - - - 0.0000000000000000000000000000000000000000000009739 168.0
DPH3_k127_5289576_0 ABC transporter K06158 - - 2.129e-215 686.0
DPH3_k127_5289576_1 Belongs to the ompA family K03286 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000004903 292.0
DPH3_k127_5289576_2 - - - - 0.000000000000008128 81.0
DPH3_k127_5327739_0 UPF0761 membrane protein K07058 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000004947 301.0
DPH3_k127_5327739_1 Belongs to the small heat shock protein (HSP20) family K13993 - - 0.0000000000000000000000000000000000000000000001502 172.0
DPH3_k127_5327739_2 Belongs to the small heat shock protein (HSP20) family K13993 - - 0.000000000000000000000000000000000000000000004719 167.0
DPH3_k127_5327739_3 Belongs to the CDP-alcohol phosphatidyltransferase class-I family - - - 0.00000000000000000000000004252 111.0
DPH3_k127_5367345_0 PFAM ATP-binding region ATPase domain protein K02482,K10819 - 2.7.13.3 2.15e-234 744.0
DPH3_k127_5367345_1 PFAM response regulator receiver - - - 4.242e-199 632.0
DPH3_k127_5367345_2 Cobalt uptake substrate-specific transmembrane region K02007 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004789 505.0
DPH3_k127_5367345_3 part of an ABC transporter complex. Responsible for energy coupling to the transport system K02006,K16787 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001056 414.0
DPH3_k127_5367345_4 TIGRFAM cobalt ABC transporter, inner membrane subunit CbiQ K02008 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001404 355.0
DPH3_k127_5367345_5 PFAM UspA - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000001721 276.0
DPH3_k127_5367345_6 PFAM nitrogen-fixing NifU domain protein K04488 - - 0.0000000000000000000000000000000003137 138.0
DPH3_k127_5378552_0 Releases the supercoiling and torsional tension of DNA, which is introduced during the DNA replication and transcription, by transiently cleaving and rejoining one strand of the DNA duplex. Introduces a single-strand break via transesterification at a target site in duplex DNA. The scissile phosphodiester is attacked by the catalytic tyrosine of the enzyme, resulting in the formation of a DNA-(5'-phosphotyrosyl)-enzyme intermediate and the expulsion of a 3'-OH DNA strand. The free DNA strand then undergoes passage around the unbroken strand, thus removing DNA supercoils. Finally, in the religation step, the DNA 3'-OH attacks the covalent intermediate to expel the active-site tyrosine and restore the DNA phosphodiester backbone K03168 - 5.99.1.2 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001333 483.0
DPH3_k127_5378552_1 Cleaves type-4 fimbrial leader sequence and methylates the N-terminal (generally Phe) residue K02654 - 3.4.23.43 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001243 340.0
DPH3_k127_5378552_2 Specifically methylates the N3 position of the uracil ring of uridine 1498 (m3U1498) in 16S rRNA. Acts on the fully assembled 30S ribosomal subunit K09761 - 2.1.1.193 0.000000000000000000000000000000000000000000000000000000000005269 216.0
DPH3_k127_5378552_4 RDD family - - - 0.000004297 57.0
DPH3_k127_5378552_5 - - - - 0.00002073 48.0
DPH3_k127_5378577_0 General (non sugar-specific) component of the phosphoenolpyruvate-dependent sugar phosphotransferase system (sugar PTS). This major carbohydrate active-transport system catalyzes the phosphorylation of incoming sugar substrates concomitantly with their translocation across the cell membrane. Enzyme I transfers the phosphoryl group from phosphoenolpyruvate (PEP) to the phosphoryl carrier protein (HPr) K08483 - 2.7.3.9 7.745e-250 784.0
DPH3_k127_5378577_1 Catalyzes the 2'-O-methylation of the ribose of cytidine 1402 (C1402) in 16S rRNA K07056 - 2.1.1.198 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007799 338.0
DPH3_k127_5378577_2 Endonuclease that specifically degrades the RNA of RNA- DNA hybrids K03470 GO:0003674,GO:0003824,GO:0004518,GO:0004519,GO:0004521,GO:0004523,GO:0004540,GO:0005575,GO:0005622,GO:0005623,GO:0006139,GO:0006259,GO:0006260,GO:0006261,GO:0006271,GO:0006273,GO:0006281,GO:0006298,GO:0006401,GO:0006725,GO:0006807,GO:0006950,GO:0006974,GO:0008150,GO:0008152,GO:0009056,GO:0009057,GO:0009058,GO:0009059,GO:0009987,GO:0016070,GO:0016787,GO:0016788,GO:0016891,GO:0016893,GO:0019439,GO:0022616,GO:0032299,GO:0032991,GO:0033554,GO:0033567,GO:0034641,GO:0034645,GO:0034655,GO:0043137,GO:0043170,GO:0044237,GO:0044238,GO:0044248,GO:0044249,GO:0044260,GO:0044265,GO:0044270,GO:0044424,GO:0044464,GO:0046483,GO:0046700,GO:0050896,GO:0051716,GO:0071704,GO:0090304,GO:0090305,GO:0090501,GO:0090502,GO:0140098,GO:1901360,GO:1901361,GO:1901575,GO:1901576 3.1.26.4 0.000000000000000000000000000000000000000000000000000000000000000000002929 241.0
DPH3_k127_5378577_3 SAM-dependent RNA methyltransferase - - - 0.00000000000000000000000000000000000000000000000000000002143 201.0
DPH3_k127_5378577_4 This protein is located at the 30S-50S ribosomal subunit interface and may play a role in the structure and function of the aminoacyl-tRNA binding site K02884 GO:0003674,GO:0003735,GO:0005198,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0015934,GO:0022625,GO:0022626,GO:0032991,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:1990904 - 0.0000000000000000000000000000000000000000000000000001881 186.0
DPH3_k127_5378577_5 Uncharacterised protein family UPF0102 K07460 - - 0.0000000000000000000000000006929 116.0
DPH3_k127_5378577_6 PTS HPr component phosphorylation site K11189 - - 0.0000000000000000000000006394 106.0
DPH3_k127_5378975_0 Belongs to the class-II aminoacyl-tRNA synthetase family K01868 GO:0003674,GO:0003824,GO:0004812,GO:0004829,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006082,GO:0006139,GO:0006399,GO:0006412,GO:0006418,GO:0006435,GO:0006518,GO:0006520,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0016070,GO:0016874,GO:0016875,GO:0019538,GO:0019752,GO:0034641,GO:0034645,GO:0034660,GO:0043038,GO:0043039,GO:0043043,GO:0043170,GO:0043436,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044281,GO:0044424,GO:0044464,GO:0046483,GO:0071704,GO:0090304,GO:0140098,GO:0140101,GO:1901360,GO:1901564,GO:1901566,GO:1901576 6.1.1.3 7.56e-322 994.0
DPH3_k127_5378975_1 Catalyzes the methylthiolation of N6- (dimethylallyl)adenosine (i(6)A), leading to the formation of 2- methylthio-N6-(dimethylallyl)adenosine (ms(2)i(6)A) at position 37 in tRNAs that read codons beginning with uridine K06168 - 2.8.4.3 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004672 514.0
DPH3_k127_5378975_11 Belongs to the class-II aminoacyl-tRNA synthetase family. Phe-tRNA synthetase alpha subunit type 1 subfamily K01889 GO:0003674,GO:0003824,GO:0004812,GO:0004826,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006082,GO:0006139,GO:0006399,GO:0006412,GO:0006418,GO:0006432,GO:0006518,GO:0006520,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0016070,GO:0016874,GO:0016875,GO:0019538,GO:0019752,GO:0034641,GO:0034645,GO:0034660,GO:0043038,GO:0043039,GO:0043043,GO:0043170,GO:0043436,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044281,GO:0044424,GO:0044464,GO:0046483,GO:0071704,GO:0090304,GO:0140098,GO:0140101,GO:1901360,GO:1901564,GO:1901566,GO:1901576 6.1.1.20 0.000000000001237 73.0
DPH3_k127_5378975_2 Belongs to the metallo-dependent hydrolases superfamily. Adenine deaminase family K01486 - 3.5.4.2 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001727 468.0
DPH3_k127_5378975_3 IF-3 binds to the 30S ribosomal subunit and shifts the equilibrum between 70S ribosomes and their 50S and 30S subunits in favor of the free subunits, thus enhancing the availability of 30S subunits on which protein synthesis initiation begins K02520 GO:0003674,GO:0003676,GO:0003723,GO:0003743,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006412,GO:0006413,GO:0006518,GO:0006807,GO:0006996,GO:0008135,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0016020,GO:0016043,GO:0019538,GO:0022411,GO:0032790,GO:0032984,GO:0032988,GO:0034641,GO:0034645,GO:0043021,GO:0043022,GO:0043043,GO:0043170,GO:0043603,GO:0043604,GO:0043933,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044424,GO:0044444,GO:0044464,GO:0044877,GO:0071704,GO:0071826,GO:0071840,GO:0097159,GO:1901363,GO:1901564,GO:1901566,GO:1901576,GO:1903008 - 0.00000000000000000000000000000000000000000000000000000000000000000000000001643 253.0
DPH3_k127_5378975_4 Bifunctional nuclease K08999 - - 0.000000000000000000000000000000000000000000000000000000000000000000000002566 247.0
DPH3_k127_5378975_5 PFAM Cyclic nucleotide-binding - - - 0.00000000000000000000000000000000000000000000000000000000000000000002073 240.0
DPH3_k127_5378975_6 CDP-alcohol phosphatidyltransferase K08744 - 2.7.8.41 0.00000000000000000000000000000000000000000000000000000000000008868 218.0
DPH3_k127_5378975_7 Binds directly to 23S ribosomal RNA and is necessary for the in vitro assembly process of the 50S ribosomal subunit. It is not involved in the protein synthesizing functions of that subunit K02887 GO:0000027,GO:0003674,GO:0003735,GO:0005198,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0006996,GO:0008150,GO:0009987,GO:0015934,GO:0016043,GO:0022607,GO:0022613,GO:0022618,GO:0022625,GO:0022626,GO:0032991,GO:0034622,GO:0042254,GO:0042255,GO:0042273,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043933,GO:0044085,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:0065003,GO:0070925,GO:0071826,GO:0071840,GO:1990904 - 0.000000000000000000000000000000000000000000000008424 173.0
DPH3_k127_5378975_9 Belongs to the bacterial ribosomal protein bL35 family K02916 GO:0003674,GO:0003735,GO:0005198,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0015934,GO:0022625,GO:0022626,GO:0032991,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:1990904 - 0.000000000000000000001453 95.0
DPH3_k127_539258_0 Putative neutral zinc metallopeptidase K07054 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004562 469.0
DPH3_k127_539258_1 PFAM TPR repeat-containing protein - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000002141 299.0
DPH3_k127_539258_2 PFAM nuclease (SNase domain protein) - - - 0.000000000000000000000000000000000000000000000000000002739 198.0
DPH3_k127_54515_0 Pyridine nucleotide-disulphide oxidoreductase K03388,K15022 - 1.17.1.10,1.8.7.3,1.8.98.4,1.8.98.5,1.8.98.6 8.007e-258 800.0
DPH3_k127_54515_1 PFAM ATP-binding region ATPase domain protein K02482,K10819 - 2.7.13.3 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000131 586.0
DPH3_k127_54515_2 Signal transduction histidine kinase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005397 489.0
DPH3_k127_54515_3 PFAM glycine cleavage H-protein - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001286 400.0
DPH3_k127_54515_4 His Kinase A (phosphoacceptor) domain K02482 - 2.7.13.3 0.00000000000000000000000000000000000000000000000000000000009328 211.0
DPH3_k127_54515_5 two component, sigma54 specific, transcriptional regulator, Fis family K07713 - - 0.000000000000000000000000000000000006651 139.0
DPH3_k127_5463702_0 Necessary for formate dehydrogenase activity K02380 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002877 325.0
DPH3_k127_5463702_1 acetyl-CoA K18122,K18288 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000003452 306.0
DPH3_k127_5466345_0 Phosphoglucose isomerase K01810 - 5.3.1.9 7.362e-291 900.0
DPH3_k127_5466345_1 PFAM MscS Mechanosensitive ion channel K22044 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001614 526.0
DPH3_k127_5466345_2 PFAM Glycosyl transferase, group 1 - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002933 418.0
DPH3_k127_5466345_3 - - - - 0.000000000000000000001073 100.0
DPH3_k127_547586_0 Belongs to the ClpA ClpB family K03694 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005445 306.0
DPH3_k127_547586_1 TIGRFAM isocitrate dehydrogenase, NADP-dependent K00031 - 1.1.1.42 0.000000000000000000000000000000000000000000000000000002009 192.0
DPH3_k127_547586_2 Involved in the modulation of the specificity of the ClpAP-mediated ATP-dependent protein degradation K06891 - - 0.0000000000000000000000000000000000007821 141.0
DPH3_k127_547586_3 Cold-shock DNA-binding domain protein K03704 - - 0.000000000000000000000000000000002786 130.0
DPH3_k127_5487715_0 The beta subunit is responsible for the synthesis of L- tryptophan from indole and L-serine K06001 - 4.2.1.20 4.059e-259 802.0
DPH3_k127_5487715_1 Glutamine amidotransferase domain K00764 - 2.4.2.14 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002151 327.0
DPH3_k127_5487715_2 - - - - 0.000000000000000000003949 97.0
DPH3_k127_5487715_3 Putative MetA-pathway of phenol degradation - - - 0.00000000000009192 74.0
DPH3_k127_548962_0 Catalyzes the phosphorylation of D-fructose 6-phosphate to fructose 1,6-bisphosphate by ATP, the first committing step of glycolysis K00850 - 2.7.1.11 2.564e-205 664.0
DPH3_k127_548962_1 Involved in base excision repair of DNA damaged by oxidation or by mutagenic agents. Acts as DNA glycosylase that recognizes and removes damaged bases. Has a preference for oxidized purines, such as 7,8-dihydro-8-oxoguanine (8-oxoG). Has AP (apurinic apyrimidinic) lyase activity and introduces nicks in the DNA strand. Cleaves the DNA backbone by beta-delta elimination to generate a single-strand break at the site of the removed base with both 3'- and 5'-phosphates K10563 - 3.2.2.23,4.2.99.18 0.00000000000000000004049 99.0
DPH3_k127_548962_2 Heavy-metal resistance - - - 0.000000000000243 78.0
DPH3_k127_5490934_0 PFAM Radical SAM - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001508 579.0
DPH3_k127_5490934_1 HD domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000005823 287.0
DPH3_k127_5490934_10 Probably deamidates glutamine residues to glutamate on methyl-accepting chemotaxis receptors (MCPs), playing an important role in chemotaxis K03411 - 3.5.1.44 0.00006179 45.0
DPH3_k127_5490934_2 Methylation of the membrane-bound methyl-accepting chemotaxis proteins (MCP) to form gamma-glutamyl methyl ester residues in MCP K00575 - 2.1.1.80 0.0000000000000000000000000000000000000000000000000000000000000000000000000001197 265.0
DPH3_k127_5490934_3 rejects L-amino acids rather than detecting D-amino acids in the active site. By recycling D-aminoacyl-tRNA to D-amino acids and free tRNA molecules, this enzyme counteracts the toxicity associated with the formation of D-aminoacyl-tRNA entities in vivo and helps enforce protein L-homochirality K07560 GO:0002161,GO:0003674,GO:0003824,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006139,GO:0006399,GO:0006450,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0009987,GO:0016070,GO:0016787,GO:0016788,GO:0034641,GO:0034660,GO:0043170,GO:0044237,GO:0044238,GO:0044424,GO:0044464,GO:0046483,GO:0051499,GO:0051500,GO:0052689,GO:0065007,GO:0065008,GO:0071704,GO:0090304,GO:0106074,GO:0140098,GO:0140101,GO:1901360 - 0.0000000000000000000000000000000000000000000000000000000008072 204.0
DPH3_k127_5490934_4 His Kinase A (phosphoacceptor) domain - - - 0.000000000000000000000000000000000000000000000000000000003385 211.0
DPH3_k127_5490934_5 transglycosylase K08309 - - 0.00000000000000000000000000000000000000001364 163.0
DPH3_k127_5490934_6 Protein of unknown function (DUF1285) K09986 - - 0.0000000000000000000000000000000000005173 145.0
DPH3_k127_5490934_7 cheY-homologous receiver domain - - - 0.000000000000000000000000000000001663 139.0
DPH3_k127_5490934_8 protein targeting K09858 - - 0.000000000000007026 86.0
DPH3_k127_5490934_9 PFAM Flagellar protein FlaG protein K06603 - - 0.000001604 55.0
DPH3_k127_5504756_0 Pterin binding enzyme K15023 - 2.1.1.258 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001482 488.0
DPH3_k127_5504756_1 CO dehydrogenase acetyl-CoA synthase delta subunit K00197 - 2.1.1.245 0.0000000000000000000000000000000000000000000000000000000000000000000000000525 249.0
DPH3_k127_5544561_0 Provides the (R)-glutamate required for cell wall biosynthesis K01776 - 5.1.1.3 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001667 380.0
DPH3_k127_5544561_1 Nitroreductase family - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000013 294.0
DPH3_k127_5544561_2 protein with a C-terminal OMP (outer membrane protein) domain K12686 GO:0003674,GO:0003824,GO:0016289,GO:0016290,GO:0016787,GO:0016788,GO:0016790,GO:0047617,GO:0052689 - 0.00000000000000000000000000003048 129.0
DPH3_k127_5544561_3 flavin adenine dinucleotide biosynthetic process K00953,K14776,K15429 - 2.1.1.228,2.7.7.2,3.6.4.13 0.0000000000000000000000000006174 118.0
DPH3_k127_5569585_0 PFAM Glycoside hydrolase 15-related - - - 3.376e-303 944.0
DPH3_k127_5569585_1 Lipocalin-like domain K03098 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000003728 277.0
DPH3_k127_5569585_2 ergothioneine biosynthetic process K01919,K06048 - 6.3.2.2 0.00000000000000000000000000000000000000000000000000000000000001344 221.0
DPH3_k127_5573770_0 AMP-binding enzyme C-terminal domain K14466 - 6.2.1.40 7.577e-267 833.0
DPH3_k127_5573770_1 - K03293 - - 1.18e-227 710.0
DPH3_k127_5573770_2 TIGRFAM methylmalonyl-CoA mutase, large subunit K01848 - 5.4.99.2 5.767e-217 687.0
DPH3_k127_5573770_3 PFAM Antibiotic biosynthesis monooxygenase - - - 0.000000000000000000000000002108 113.0
DPH3_k127_5576242_0 Transport of potassium into the cell K03549 - - 1.272e-276 863.0
DPH3_k127_5576242_1 transmembrane transport - - - 0.000000000000000000004576 94.0
DPH3_k127_5576242_2 - - - - 0.000001373 50.0
DPH3_k127_5577682_0 Beta-lactamase superfamily domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001504 324.0
DPH3_k127_5577682_1 PFAM Peptidase M16 - - - 0.0000000000000000000000000000000000000000001014 162.0
DPH3_k127_5577682_2 AMP binding - - - 0.0000000000000000000000000000000000000000001275 168.0
DPH3_k127_5588678_0 Rhodanese Homology Domain K01069 - 3.1.2.6 9.58e-199 631.0
DPH3_k127_5588678_1 ABC-type transport auxiliary lipoprotein component K09857 - - 0.0000000000000000000000000000000000000000000162 171.0
DPH3_k127_5588678_2 MlaD protein K06192 - - 0.0000000000000000000000003194 110.0
DPH3_k127_5623774_0 this subunit has chaperone activity. The binding of ATP and its subsequent hydrolysis by HslU are essential for unfolding of protein substrates subsequently hydrolyzed by HslV. HslU recognizes the N-terminal part of its protein substrates and unfolds these before they are guided to HslV for hydrolysis K03667 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003016 499.0
DPH3_k127_5623774_1 Protease subunit of a proteasome-like degradation complex believed to be a general protein degrading machinery K01419 - 3.4.25.2 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000001603 286.0
DPH3_k127_5623774_2 Site-specific tyrosine recombinase, which acts by catalyzing the cutting and rejoining of the recombining DNA molecules. The XerC-XerD complex is essential to convert dimers of the bacterial chromosome into monomers to permit their segregation at cell division. It also contributes to the segregational stability of plasmids K03733,K04763 - - 0.000000000003352 66.0
DPH3_k127_5651059_0 Phosphofructokinase K00895,K21071 - 2.7.1.11,2.7.1.90 8.609e-256 802.0
DPH3_k127_5651059_1 Methyltransferase domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002023 361.0
DPH3_k127_5651059_2 PFAM SNARE associated Golgi protein - - - 0.0000000000000000000000000000000000000000000000000000000000000000004353 236.0
DPH3_k127_5657155_0 aldehyde oxidase and xanthine dehydrogenase, a b hammerhead K11177 - 1.17.1.4 0.0000000000000000000000000000000000000000000000000000000000000000000000000000006543 268.0
DPH3_k127_5657155_1 2Fe-2S -binding domain K13483 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000003273 256.0
DPH3_k127_5657155_2 Domain of unknown function (DUF362) - - - 0.0000000000000000000000000000000000000000000000000000000000004051 218.0
DPH3_k127_5657155_3 Domain of unknown function DUF123 - - - 0.000000000000000000000000000000000000006119 148.0
DPH3_k127_5673166_0 Biotin carboxylase C-terminal domain K01959,K01961 - 6.3.4.14,6.4.1.1,6.4.1.2 5.266e-247 768.0
DPH3_k127_5673166_1 pyruvate K01571,K01958,K01960 - 4.1.1.3,6.4.1.1 0.0000000000000000000000000000000000000000007774 158.0
DPH3_k127_5680372_0 PFAM AICARFT IMPCHase bienzyme K00602 - 2.1.2.3,3.5.4.10 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001124 563.0
DPH3_k127_5680372_1 Radical SAM enzyme that catalyzes the cyclization of dehypoxanthine futalosine (DHFL) into cyclic dehypoxanthine futalosine (CDHFL), a step in the biosynthesis of menaquinone (MK, vitamin K2) K11784 - 1.21.98.1 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000202 561.0
DPH3_k127_5680372_2 Radical SAM enzyme that catalyzes the addition of the adenosyl radical to the double bond of 3- (1- carboxyvinyl)oxy benzoate, leading to aminodeoxyfutalosine (AFL), a key intermediate in the formation of menaquinone (MK, vitamin K2) from chorismate K11779,K11784,K18285 - 1.21.98.1,2.5.1.120,2.5.1.77 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001322 556.0
DPH3_k127_5680372_3 Amidohydrolase family K20810 - 3.5.4.40 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000589 393.0
DPH3_k127_5680372_4 DeoC/LacD family aldolase K11645 - 4.1.2.13 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008645 314.0
DPH3_k127_5680372_5 Transcriptional regulator, TetR family - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000006968 275.0
DPH3_k127_5680372_6 Catalyzes the dehydration of chorismate into 3- (1- carboxyvinyl)oxy benzoate, a step in the biosynthesis of menaquinone (MK, vitamin K2) K11782 - 4.2.1.151 0.00000000000000000000000000000000000000000000000000000000000000000000000000000001008 278.0
DPH3_k127_5680372_7 Flavin prenyltransferase that catalyzes the synthesis of the prenylated FMN cofactor (prenyl-FMN) for 4-hydroxy-3- polyprenylbenzoic acid decarboxylase UbiD. The prenyltransferase is metal-independent and links a dimethylallyl moiety from dimethylallyl monophosphate (DMAP) to the flavin N5 and C6 atoms of FMN K03186 - 2.5.1.129 0.000000000000000000000000000000000000000000000000000000000000000000004625 240.0
DPH3_k127_5690692_0 aconitate hydratase K01681 - 4.2.1.3 0.0 1018.0
DPH3_k127_5690692_1 succinate dehydrogenase or fumarate reductase, flavoprotein K00239 - 1.3.5.1,1.3.5.4 2.236e-260 812.0
DPH3_k127_5690692_10 PFAM Nitroreductase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000005828 252.0
DPH3_k127_5690692_11 Phage shock protein A K03969 - - 0.000000000000000000000000000000000000000000000000000000000006767 214.0
DPH3_k127_5690692_12 Membrane - - - 0.000000000000000000000000000000000000000000000000000000007774 219.0
DPH3_k127_5690692_13 - - - - 0.000000000000000000000000000000000000000000000102 172.0
DPH3_k127_5690692_14 Domain of Unknown Function (DUF350) - - - 0.0000000000000000000000000000000000001092 153.0
DPH3_k127_5690692_15 Putative bacterial sensory transduction regulator - - - 0.0000000000000000000000000000000000005125 144.0
DPH3_k127_5690692_2 Catalyzes the condensation of the acetyl group of acetyl-CoA with 3-methyl-2-oxobutanoate (2-oxoisovalerate) to form 3-carboxy-3-hydroxy-4-methylpentanoate (2-isopropylmalate) K01649 - 2.3.3.13 1.359e-256 798.0
DPH3_k127_5690692_3 Involved in the TCA cycle. Catalyzes the stereospecific interconversion of fumarate to L-malate K01679,K01744 - 4.2.1.2,4.3.1.1 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002597 613.0
DPH3_k127_5690692_4 Belongs to the citrate synthase family K01647 - 2.3.3.1 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003626 557.0
DPH3_k127_5690692_5 Catalyzes the phosphorylation of D-fructose 6-phosphate to fructose 1,6-bisphosphate by ATP, the first committing step of glycolysis K21071 - 2.7.1.11,2.7.1.90 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001229 522.0
DPH3_k127_5690692_6 Potential Queuosine, Q, salvage protein family - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002188 400.0
DPH3_k127_5690692_7 TIGRFAM succinate dehydrogenase and fumarate reductase iron-sulfur protein K00240,K00245 - 1.3.5.1,1.3.5.4 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001507 355.0
DPH3_k127_5690692_8 Probable RNA and SrmB- binding site of polymerase A K00970,K00974 - 2.7.7.19,2.7.7.72 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000121 314.0
DPH3_k127_5690692_9 Enoyl-CoA hydratase/isomerase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000001611 259.0
DPH3_k127_5706290_0 Probable molybdopterin binding domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009411 478.0
DPH3_k127_5706290_1 FmdE, Molybdenum formylmethanofuran dehydrogenase operon K11261 - 1.2.7.12 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000846 293.0
DPH3_k127_5706290_2 Protein tyrosine kinase K12132 - 2.7.11.1 0.0000000000000000000000000000001232 128.0
DPH3_k127_5706290_3 Pentapeptide repeats (9 copies) - - - 0.0000000000000000000000000018 125.0
DPH3_k127_5706290_4 component of anaerobic - - - 0.000000000261 69.0
DPH3_k127_5706290_5 Antitoxin component of bacterial toxin-antitoxin system, MqsA K13655 - - 0.0000000003234 61.0
DPH3_k127_5706290_6 Protein tyrosine kinase K12132 - 2.7.11.1 0.000007976 48.0
DPH3_k127_5706290_7 Antitoxin component of a type II toxin-antitoxin (TA) system. Labile antitoxin that binds to the MqsR mRNA interferase toxin and neutralizes its endoribonuclease activity. Overexpression prevents MqsR-mediated cessation of cell growth and inhibition of cell proliferation. Initially reported to act as a cotranscription factor with MqsA. Following further experiments, the MqsR-MqsA complex does not bind DNA and all reported data are actually due to a small fraction of free MqsA alone binding DNA. Addition of MqsR to a preformed MqsA-promoter DNA complex causes dissociation of the MqsA-DNA complex, probably causing derepression of MqsA- repressed transcripts. MqsA binds to 2 palindromes in the promoter region of the mqsRA operon activating its transcription. Binds to other promoters, inducing mcbR and spy and repressing cspD among others. Binds to and represses the rpoS promoter, the master stress regulator, resulting in decreased cyclic-di-GMP, reduced stress resistance, increased cell motility and decreased biofilm formation K13655 GO:0003674,GO:0003676,GO:0003677,GO:0005488,GO:0006355,GO:0008150,GO:0009889,GO:0010468,GO:0010556,GO:0019219,GO:0019222,GO:0031323,GO:0031326,GO:0043565,GO:0050789,GO:0050794,GO:0051171,GO:0051252,GO:0060255,GO:0065007,GO:0080090,GO:0097159,GO:1901363,GO:1903506,GO:2000112,GO:2001141 - 0.00001035 48.0
DPH3_k127_5724522_0 Carbohydrate phosphorylase K00688,K16153 - 2.4.1.1,2.4.1.11 1.93e-207 651.0
DPH3_k127_5753002_0 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III K01840,K15778 - 5.4.2.2,5.4.2.8 3.367e-211 664.0
DPH3_k127_5753002_1 Belongs to the UDP-glucose GDP-mannose dehydrogenase family K02472,K02474,K13015 - 1.1.1.136,1.1.1.336 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004116 575.0
DPH3_k127_5753002_2 3-beta hydroxysteroid dehydrogenase/isomerase family K01784 - 5.1.3.2 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005069 342.0
DPH3_k127_5753002_3 ADP-ribosylglycohydrolase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000006197 292.0
DPH3_k127_5753002_4 Transcriptional regulatory protein, C terminal K02483 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000003114 254.0
DPH3_k127_5753002_5 Transglutaminase-like superfamily - - - 0.0000000000000000000000000000000000000000000000000000000000000000000005971 240.0
DPH3_k127_5753002_6 NUDIX domain - - - 0.0000000000000000000000000000000000000000000000000000000000000008642 223.0
DPH3_k127_5753002_7 Iron/manganese superoxide dismutases, C-terminal domain K04564 - 1.15.1.1 0.0000000000000000001249 92.0
DPH3_k127_5753002_8 - - - - 0.00001608 50.0
DPH3_k127_5756744_0 Allows the formation of correctly charged Asn-tRNA(Asn) or Gln-tRNA(Gln) through the transamidation of misacylated Asp- tRNA(Asn) or Glu-tRNA(Gln) in organisms which lack either or both of asparaginyl-tRNA or glutaminyl-tRNA synthetases. The reaction takes place in the presence of glutamine and ATP through an activated phospho-Asp-tRNA(Asn) or phospho-Glu-tRNA(Gln) K02434 GO:0003674,GO:0003824,GO:0006082,GO:0006139,GO:0006399,GO:0006520,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0009987,GO:0016070,GO:0016874,GO:0016879,GO:0016884,GO:0019752,GO:0034641,GO:0034660,GO:0043038,GO:0043039,GO:0043170,GO:0043436,GO:0044237,GO:0044238,GO:0044281,GO:0046483,GO:0050567,GO:0070681,GO:0071704,GO:0090304,GO:0140098,GO:0140101,GO:1901360,GO:1901564 6.3.5.6,6.3.5.7 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002267 584.0
DPH3_k127_5756744_1 COGs COG0767 ABC-type transport system involved in resistance to organic solvents permease component K02066 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001068 430.0
DPH3_k127_5756744_2 Catalyzes the interconversion of methylthioribose-1- phosphate (MTR-1-P) into methylthioribulose-1-phosphate (MTRu-1- P) K08963 GO:0000096,GO:0000097,GO:0003674,GO:0003824,GO:0006082,GO:0006520,GO:0006555,GO:0006790,GO:0006807,GO:0008150,GO:0008152,GO:0008652,GO:0009058,GO:0009066,GO:0009067,GO:0009086,GO:0009987,GO:0016053,GO:0016853,GO:0016860,GO:0016861,GO:0017144,GO:0019509,GO:0019752,GO:0043094,GO:0043102,GO:0043436,GO:0044237,GO:0044238,GO:0044249,GO:0044272,GO:0044281,GO:0044283,GO:0046394,GO:0046523,GO:0071265,GO:0071267,GO:0071704,GO:1901564,GO:1901566,GO:1901576,GO:1901605,GO:1901607 5.3.1.23 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001288 429.0
DPH3_k127_5756744_3 TIGRFAM molybdenum cofactor synthesis domain K03750 - 2.10.1.1 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001242 331.0
DPH3_k127_5756744_4 Allows the formation of correctly charged Asn-tRNA(Asn) or Gln-tRNA(Gln) through the transamidation of misacylated Asp- tRNA(Asn) or Glu-tRNA(Gln) in organisms which lack either or both of asparaginyl-tRNA or glutaminyl-tRNA synthetases. The reaction takes place in the presence of glutamine and ATP through an activated phospho-Asp-tRNA(Asn) or phospho-Glu-tRNA(Gln) K02434 GO:0003674,GO:0003824,GO:0006082,GO:0006139,GO:0006399,GO:0006520,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0009987,GO:0016070,GO:0016874,GO:0016879,GO:0016884,GO:0019752,GO:0034641,GO:0034660,GO:0043038,GO:0043039,GO:0043170,GO:0043436,GO:0044237,GO:0044238,GO:0044281,GO:0046483,GO:0050567,GO:0070681,GO:0071704,GO:0090304,GO:0140098,GO:0140101,GO:1901360,GO:1901564 6.3.5.6,6.3.5.7 0.000000000000000000000000000000000000000000000000007235 182.0
DPH3_k127_5756744_5 Protein of unknown function DUF86 - - - 0.00000000000000000000000006173 111.0
DPH3_k127_5756744_6 ABC-type transport system involved in resistance to organic solvents, ATPase component K02065 - - 0.000000000000000000642 91.0
DPH3_k127_5756744_7 Nucleotidyltransferase domain - - - 0.0000946 50.0
DPH3_k127_5756744_8 PEP-CTERM motif - - - 0.0002926 46.0
DPH3_k127_576189_0 UDP-N-acetylglucosamine 2-epimerase K01791 - 5.1.3.14 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004563 459.0
DPH3_k127_576189_1 glycosyl transferase family 2 - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007245 372.0
DPH3_k127_576189_2 - - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000001565 305.0
DPH3_k127_576189_3 Uncharacterized protein conserved in bacteria (DUF2334) - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000006988 290.0
DPH3_k127_576189_4 Catalyzes the synthesis of activated sulfate K00390,K00860 - 1.8.4.10,1.8.4.8,2.7.1.25 0.00000000000000176 80.0
DPH3_k127_577893_0 PFAM AICARFT IMPCHase bienzyme K00602 - 2.1.2.3,3.5.4.10 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004949 464.0
DPH3_k127_577893_1 Heterodisulfide reductase subunit B K03389 - 1.8.7.3,1.8.98.4,1.8.98.5,1.8.98.6 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008969 391.0
DPH3_k127_577893_2 PFAM membrane protein involved in aromatic hydrocarbon degradation K06076 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001133 389.0
DPH3_k127_577893_3 Catalyzes the transfer of a methyl group from 5- methyltetrahydrofolate to homocysteine resulting in methionine formation - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003172 389.0
DPH3_k127_577893_4 CDP-alcohol phosphatidyltransferase K00995 - 2.7.8.5 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000002337 282.0
DPH3_k127_577893_5 4Fe-4S dicluster domain K03390 - 1.8.7.3,1.8.98.4,1.8.98.5,1.8.98.6 0.00000000000000000000000000000000000000000000000000000000000000000009565 235.0
DPH3_k127_577893_6 4Fe-4S ferredoxin iron-sulfur binding domain protein K03388 - 1.8.7.3,1.8.98.4,1.8.98.5,1.8.98.6 0.000000000000000000000000000000000000006579 147.0
DPH3_k127_577893_7 PFAM membrane protein involved in aromatic hydrocarbon degradation K06076 - - 0.000000000000000000000206 97.0
DPH3_k127_5783770_0 Radical SAM domain protein K04069 - 1.97.1.4 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005571 426.0
DPH3_k127_5783770_1 Memo-like protein K06990 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007611 385.0
DPH3_k127_5794198_0 Catalyzes the insertion of Co(2 ) into sirohydrochlorin K02190 GO:0003674,GO:0003824,GO:0004325,GO:0005488,GO:0005575,GO:0005623,GO:0008150,GO:0009987,GO:0016043,GO:0016829,GO:0016852,GO:0020037,GO:0022607,GO:0042597,GO:0043167,GO:0043169,GO:0043933,GO:0044085,GO:0044464,GO:0046872,GO:0046906,GO:0046914,GO:0048037,GO:0050897,GO:0051259,GO:0051262,GO:0051266,GO:0065003,GO:0071840,GO:0097159,GO:1901363 4.99.1.3 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003525 305.0
DPH3_k127_5794198_1 Domain of unknown function (DUF4214) - - - 0.000000000000000000000000004586 121.0
DPH3_k127_5794198_2 Receptor family ligand binding region - - - 0.00000000001296 69.0
DPH3_k127_5848307_0 Catalyzes the ferredoxin-dependent oxidative decarboxylation of arylpyruvates K00179 - 1.2.7.8 1.957e-274 858.0
DPH3_k127_5848307_1 Belongs to the binding-protein-dependent transport system permease family K01995,K01998 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002379 569.0
DPH3_k127_5848307_2 Branched-chain amino acid transport system / permease component K01997 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006384 409.0
DPH3_k127_5848307_3 PFAM pyruvate ferredoxin flavodoxin oxidoreductase K00180 - 1.2.7.8 0.0000000000000000000000000000000000000000000000000006636 189.0
DPH3_k127_5848307_4 - - - - 0.00000000000000000009444 90.0
DPH3_k127_5862191_0 PFAM conjugation TrbI family protein K20533 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000004953 255.0
DPH3_k127_5862191_1 PFAM Cobyrinic acid a,c-diamide synthase K03496 - - 0.000000000000000000000000000000000000000000000000000000000000000000009265 246.0
DPH3_k127_5870756_0 Belongs to the glycosyl hydrolase 57 family - - - 7.08e-291 915.0
DPH3_k127_5870756_1 Transglycosylase K05365 - 2.4.1.129,3.4.16.4 8.078e-289 905.0
DPH3_k127_5870756_2 tRNA (Uracil-5-)-methyltransferase K03215 - 2.1.1.190 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002478 365.0
DPH3_k127_5870756_3 Peptidase dimerisation domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004136 324.0
DPH3_k127_5880421_0 tRNA methyltransferase complex GCD14 subunit K07442 - 2.1.1.219,2.1.1.220 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001727 340.0
DPH3_k127_5880421_1 Glycosyltransferase family 28 C-terminal domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000007673 273.0
DPH3_k127_5880421_2 PFAM Rubrerythrin - - - 0.0000000000000000000000000000000000001249 147.0
DPH3_k127_5898381_0 Branched-chain amino acid transport system / permease component K01997 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003888 478.0
DPH3_k127_5898381_1 Branched-chain amino acid transport system / permease component K01998 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006613 470.0
DPH3_k127_5898381_2 PFAM ABC transporter related K01995 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001112 397.0
DPH3_k127_5898381_3 Belongs to the glycosyl hydrolase 57 family K22451 GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0044424,GO:0044464 2.4.1.25 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002997 393.0
DPH3_k127_5898381_4 Receptor family ligand binding region K01999 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000393 378.0
DPH3_k127_5898381_5 ABC-type branched-chain amino acid transport systems ATPase component K01996 - - 0.00000000000000000000000000000000000000000000000000000000000000000009456 239.0
DPH3_k127_5931694_0 Belongs to the aspartokinase family K00928 - 2.7.2.4 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008926 604.0
DPH3_k127_5931694_1 Belongs to the alpha-IPM synthase homocitrate synthase family K01649 - 2.3.3.13 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001888 337.0
DPH3_k127_5931694_2 - - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000766 327.0
DPH3_k127_5931694_3 Bacterial protein of unknown function (Gcw_chp) - - - 0.00000000000000000000000000000000000000000000000000000000000000000000001185 253.0
DPH3_k127_5931694_4 - - - - 0.0000008887 57.0
DPH3_k127_6002052_0 Sulfatase-modifying factor enzyme 1 - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002798 490.0
DPH3_k127_6002052_1 - - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003795 374.0
DPH3_k127_6002052_2 - - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000001471 260.0
DPH3_k127_6002052_3 Peptidase family M23 - - - 0.0000000000000000000000000000741 121.0
DPH3_k127_6002052_4 Type IV pilus biogenesis stability protein PilW - - - 0.0000000000000000000001212 100.0
DPH3_k127_6017399_0 Uncharacterized protein family (UPF0051) K07033 - - 1.242e-203 639.0
DPH3_k127_6017399_1 ABC-type transport system involved in lipoprotein release permease component K02004 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005207 471.0
DPH3_k127_6017399_2 GTPase that plays an essential role in the late steps of ribosome biogenesis K03977 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004055 440.0
DPH3_k127_6017399_3 - - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007864 346.0
DPH3_k127_6017399_4 ABC transporter K09013 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001532 311.0
DPH3_k127_6017399_5 ATPases associated with a variety of cellular activities K02003 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002372 302.0
DPH3_k127_6017399_6 Outer membrane lipoprotein-sorting protein - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000002417 271.0
DPH3_k127_6017399_7 PFAM molybdopterin oxidoreductase K00123,K05299 - 1.17.1.10,1.17.1.9 0.0000000000000000000000000000000000000000000000000003382 204.0
DPH3_k127_6024252_0 PFAM Pyruvate phosphate dikinase, PEP pyruvate-binding K01007 - 2.7.9.2 5.466e-268 850.0
DPH3_k127_6024252_1 Sulfite exporter TauE/SafE K07090 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000305 472.0
DPH3_k127_6024252_2 Bacterial regulatory protein, Fis family K07713 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001753 441.0
DPH3_k127_6024252_3 AMP binding - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002952 361.0
DPH3_k127_6024252_4 Universal stress protein family - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001332 351.0
DPH3_k127_6024252_5 cheY-homologous receiver domain - - - 0.000000000000000000000000000000000000000000000000000004824 192.0
DPH3_k127_6024252_6 Putative transmembrane protein (Alph_Pro_TM) - - - 0.0000000000000000000000000000000000000000000000005975 184.0
DPH3_k127_6024252_7 - - - - 0.00000000000000000000000000000000000008784 154.0
DPH3_k127_6024252_8 Universal stress protein family - - - 0.000000000000000002347 91.0
DPH3_k127_6045908_0 Cysteine-rich domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007718 435.0
DPH3_k127_6045908_1 His Kinase A (phosphoacceptor) domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003561 356.0
DPH3_k127_6061086_0 Prevents misfolding and promotes the refolding and proper assembly of unfolded polypeptides generated under stress conditions K04077 - - 2.573e-294 909.0
DPH3_k127_6061086_1 Polysaccharide biosynthesis protein K08679 - 5.1.3.6 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000224 519.0
DPH3_k127_6061086_10 Binds to Cpn60 in the presence of Mg-ATP and suppresses the ATPase activity of the latter K04078 - - 0.000000000000000000000000000000000000000000003107 166.0
DPH3_k127_6061086_11 HflC and HflK could encode or regulate a protease K04088 - - 0.000000000000000000000000000000000000000002447 160.0
DPH3_k127_6061086_12 Transcriptional regulator K13643 - - 0.0000000000000000000000000000000000002566 145.0
DPH3_k127_6061086_2 Creatinase/Prolidase N-terminal domain K01262 - 3.4.11.9 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003286 471.0
DPH3_k127_6061086_3 MiaB-like tRNA modifying enzyme K18707 - 2.8.4.5 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007813 464.0
DPH3_k127_6061086_4 - - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003489 449.0
DPH3_k127_6061086_5 Belongs to the DegT DnrJ EryC1 family - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008494 433.0
DPH3_k127_6061086_6 Catalyzes the 2-thiolation of uridine at the wobble position (U34) of tRNA, leading to the formation of s(2)U34 K00566 - 2.8.1.13 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000137 383.0
DPH3_k127_6061086_7 NIL - - - 0.00000000000000000000000000000000000000000000000000000000000000001648 228.0
DPH3_k127_6061086_8 PFAM Universal stress protein family K06149 - - 0.00000000000000000000000000000000000000000000000000000001266 203.0
DPH3_k127_6061086_9 NifU-like N terminal domain K04488 - - 0.00000000000000000000000000000000000000000000000756 177.0
DPH3_k127_6062270_0 MacB-like periplasmic core domain K02004 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004342 438.0
DPH3_k127_6062270_1 Lipocalin-like domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007019 369.0
DPH3_k127_6062270_2 Protein of unknown function (DUF1353) - - - 0.0000000000000000000000000000000000002136 145.0
DPH3_k127_6081087_0 Insulinase (Peptidase family M16) K07263 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001469 544.0
DPH3_k127_6081087_1 Respiratory-chain NADH dehydrogenase domain 51 kDa subunit K00335,K18331 - 1.12.1.3,1.6.5.3 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005308 431.0
DPH3_k127_6081087_2 PFAM GAF domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000001098 256.0
DPH3_k127_6081087_3 Membrane - - - 0.000000000000000000000000002649 121.0
DPH3_k127_6085491_0 Involved in the gluconeogenesis. Catalyzes the conversion of oxaloacetate (OAA) to phosphoenolpyruvate (PEP) through direct phosphoryl transfer between the nucleoside triphosphate and OAA K01610 GO:0003674,GO:0003824,GO:0004611,GO:0004612,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005975,GO:0005996,GO:0006006,GO:0006094,GO:0008150,GO:0008152,GO:0009058,GO:0016051,GO:0016829,GO:0016830,GO:0016831,GO:0019318,GO:0019319,GO:0044238,GO:0044281,GO:0044283,GO:0044424,GO:0044444,GO:0044464,GO:0046364,GO:0071704,GO:1901576 4.1.1.49 2.59e-227 715.0
DPH3_k127_6085491_1 Fe-S center protein K07138 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005008 492.0
DPH3_k127_6085491_2 Digests double-stranded RNA. Involved in the processing of primary rRNA transcript to yield the immediate precursors to the large and small rRNAs (23S and 16S). Processes some mRNAs, and tRNAs when they are encoded in the rRNA operon. Processes pre- crRNA and tracrRNA of type II CRISPR loci if present in the organism K03685 GO:0003674,GO:0003676,GO:0003723,GO:0003725,GO:0003824,GO:0004518,GO:0004519,GO:0004521,GO:0004525,GO:0004540,GO:0005488,GO:0006139,GO:0006396,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0009987,GO:0010467,GO:0016070,GO:0016787,GO:0016788,GO:0016891,GO:0016893,GO:0032296,GO:0034641,GO:0043170,GO:0044237,GO:0044238,GO:0046483,GO:0071704,GO:0090304,GO:0090305,GO:0090501,GO:0090502,GO:0097159,GO:0140098,GO:1901360,GO:1901363 3.1.26.3 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000073 304.0
DPH3_k127_6085491_3 Protein of unknown function (DUF1614) - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000002322 273.0
DPH3_k127_6085491_4 PFAM Radical SAM - - - 0.00000000000000000000000000000000000000000000000000000000000000000000004764 253.0
DPH3_k127_6085491_5 KH domain K03595 - - 0.000000000000000000000000000000000000000000000000000000000000000003267 233.0
DPH3_k127_6085491_6 D,D-heptose 1,7-bisphosphate phosphatase K03273 - 3.1.3.82,3.1.3.83 0.0000000000000000000000000000000000000000000000000003474 190.0
DPH3_k127_6085491_7 2Fe-2S iron-sulfur cluster binding domain - - - 0.0000000000000000000000001324 109.0
DPH3_k127_6094660_0 PFAM major facilitator superfamily MFS_1 K03446 - - 2.746e-228 718.0
DPH3_k127_6094660_1 Master enzyme that delivers sulfur to a number of partners involved in Fe-S cluster assembly, tRNA modification or cofactor biosynthesis. Catalyzes the removal of elemental sulfur atoms from cysteine to produce alanine. Functions as a sulfur delivery protein for Fe-S cluster synthesis onto IscU, an Fe-S scaffold assembly protein, as well as other S acceptor proteins K04487 - 2.8.1.7 0.0000000000000000000000143 104.0
DPH3_k127_6094660_2 Sulfurtransferase TusA - - - 0.00000000000000000114 89.0
DPH3_k127_6094660_3 Transcriptional regulator - - - 0.00000002969 55.0
DPH3_k127_6102722_0 PFAM 4Fe-4S ferredoxin iron-sulfur binding - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002533 394.0
DPH3_k127_6102722_1 - - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005183 332.0
DPH3_k127_6102722_2 hydrolase of the alpha beta superfamily K07018 - - 0.00000000000000000000000000005948 123.0
DPH3_k127_6102722_4 - - - - 0.0000000000000000000001198 99.0
DPH3_k127_6102722_5 AAA domain - - - 0.000000000000009297 77.0
DPH3_k127_6102722_6 transcriptional regulator containing an HTH domain fused to a Zn-ribbon K07743 - - 0.000000000003181 67.0
DPH3_k127_6118531_0 PFAM Bacterial regulatory protein, Fis family - - - 1.482e-227 711.0
DPH3_k127_6118531_1 FmdE, Molybdenum formylmethanofuran dehydrogenase operon K11261 - 1.2.7.12 0.0000000000000000000000000000000000000000000001996 176.0
DPH3_k127_6118531_2 peroxiredoxin activity - - - 0.0000000000000000000000000000000000000006069 152.0
DPH3_k127_6118531_3 cheY-homologous receiver domain - - - 0.0000000000000000000000000000000000001793 145.0
DPH3_k127_6118531_4 Thioesterase K01075,K07107 - 3.1.2.23 0.000000000000000000000000000000000001041 144.0
DPH3_k127_6118531_5 Dinitrogenase iron-molybdenum cofactor - - - 0.000000000000000000005813 100.0
DPH3_k127_6122720_0 PFAM Histone deacetylase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009602 476.0
DPH3_k127_6122720_1 Belongs to the AlaDH PNT family K00259 - 1.4.1.1 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001555 451.0
DPH3_k127_6122720_2 Inner membrane component of T3SS, cytoplasmic domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004048 362.0
DPH3_k127_6122720_3 - - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006742 361.0
DPH3_k127_6122720_4 PFAM CBS domain containing protein K04767 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003442 304.0
DPH3_k127_6122720_5 PFAM NADPH-dependent FMN reductase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000004852 295.0
DPH3_k127_6122720_6 Ribosomal protein L11 methyltransferase (PrmA) - - - 0.000000000000000000000000000000000000001723 155.0
DPH3_k127_6122720_7 Glycerophosphoryl diester phosphodiesterase family K01126 - 3.1.4.46 0.000000000000000000000000008256 119.0
DPH3_k127_6122720_8 RimK domain protein ATP-grasp K05844 - - 0.0000000000000000000000009538 111.0
DPH3_k127_6122720_9 Metallo-beta-lactamase superfamily - - - 0.00000000000000000001119 102.0
DPH3_k127_6129035_0 Adenylyl- / guanylyl cyclase, catalytic domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000392 596.0
DPH3_k127_6129035_1 PLD-like domain K00995,K06131 - 2.7.8.5 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002242 545.0
DPH3_k127_6129035_2 Endonuclease Exonuclease Phosphatase - - - 0.0000000000000000000000000000000000357 145.0
DPH3_k127_6154638_0 Iron (Metal) dependent repressor, DtxR family K03709 - - 0.000000000000000000000000000000000000000000000000000000000000000000004142 239.0
DPH3_k127_6154638_1 transporter of a GTP-driven Fe(2 ) uptake system K04759 - - 0.000000000000000000000000000000000000000000000000000000000000000000007125 237.0
DPH3_k127_6154638_2 Prephenate dehydrogenase K04517,K14187 - 1.3.1.12,5.4.99.5 0.00000000000000000000000000000000000000000000000000000000000000005535 227.0
DPH3_k127_6154638_3 FeoA K04758 - - 0.00000000000000000000000000003885 117.0
DPH3_k127_6154638_4 FeoA domain - - - 0.000000000000000000000005542 105.0
DPH3_k127_6154969_0 Produces ATP from ADP in the presence of a proton gradient across the membrane. The alpha chain is a regulatory subunit K02111 - 3.6.3.14 2.838e-277 857.0
DPH3_k127_6154969_1 Penicillin-binding protein, dimerisation domain K05515 - 3.4.16.4 5.462e-265 830.0
DPH3_k127_6154969_2 Peptidoglycan polymerase that is essential for cell wall elongation K05837 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000172 534.0
DPH3_k127_6154969_3 Produces ATP from ADP in the presence of a proton gradient across the membrane. The gamma chain is believed to be important in regulating ATPase activity and the flow of protons through the CF(0) complex K02115 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000203 436.0
DPH3_k127_6154969_4 Produces ATP from ADP in the presence of a proton gradient across the membrane. The catalytic sites are hosted primarily by the beta subunits K02112 - 3.6.3.14 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002467 382.0
DPH3_k127_6154969_5 F(1)F(0) ATP synthase produces ATP from ADP in the presence of a proton or sodium gradient. F-type ATPases consist of two structural domains, F(1) containing the extramembraneous catalytic core and F(0) containing the membrane proton channel, linked together by a central stalk and a peripheral stalk. During catalysis, ATP synthesis in the catalytic domain of F(1) is coupled via a rotary mechanism of the central stalk subunits to proton translocation K02113 - - 0.00000000000000000000000000000000000000000000000000000000000002833 220.0
DPH3_k127_6154969_6 Component of the F(0) channel, it forms part of the peripheral stalk, linking F(1) to F(0) K02109 GO:0003674,GO:0003824,GO:0005215,GO:0005575,GO:0005622,GO:0005623,GO:0005886,GO:0006139,GO:0006163,GO:0006164,GO:0006725,GO:0006753,GO:0006754,GO:0006793,GO:0006796,GO:0006807,GO:0006810,GO:0006811,GO:0006812,GO:0008150,GO:0008152,GO:0008324,GO:0009058,GO:0009117,GO:0009123,GO:0009124,GO:0009126,GO:0009127,GO:0009141,GO:0009142,GO:0009144,GO:0009145,GO:0009150,GO:0009152,GO:0009156,GO:0009161,GO:0009165,GO:0009167,GO:0009168,GO:0009199,GO:0009201,GO:0009205,GO:0009206,GO:0009259,GO:0009260,GO:0009987,GO:0015075,GO:0015077,GO:0015078,GO:0015318,GO:0015399,GO:0015405,GO:0015672,GO:0015985,GO:0015986,GO:0016020,GO:0016462,GO:0016469,GO:0016787,GO:0016817,GO:0016818,GO:0016887,GO:0017111,GO:0017144,GO:0018130,GO:0019438,GO:0019637,GO:0019693,GO:0019829,GO:0022804,GO:0022853,GO:0022857,GO:0022890,GO:0032991,GO:0033177,GO:0034220,GO:0034641,GO:0034654,GO:0042623,GO:0042625,GO:0042626,GO:0043492,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0044424,GO:0044425,GO:0044459,GO:0044464,GO:0044769,GO:0045259,GO:0045260,GO:0045263,GO:0045264,GO:0046034,GO:0046390,GO:0046483,GO:0046933,GO:0051179,GO:0051234,GO:0055085,GO:0055086,GO:0071704,GO:0071944,GO:0072521,GO:0072522,GO:0090407,GO:0090662,GO:0098655,GO:0098660,GO:0098662,GO:0098796,GO:0098797,GO:0099131,GO:0099132,GO:1901135,GO:1901137,GO:1901293,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576,GO:1902600 - 0.000000000000000000000000000000000000000000000002412 184.0
DPH3_k127_6154969_7 Component of the F(0) channel, it forms part of the peripheral stalk, linking F(1) to F(0) K02109 - - 0.0000000000000002337 84.0
DPH3_k127_6185157_0 Part of the ABC transporter complex PstSACB involved in phosphate import. Responsible for energy coupling to the transport system K02036 - 3.6.3.27 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001047 411.0
DPH3_k127_6185157_1 Part of the ABC transporter complex PstSACB involved in phosphate import. Responsible for energy coupling to the transport system - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003072 395.0
DPH3_k127_6185157_2 RmuC family K09760 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001548 398.0
DPH3_k127_6185157_3 Plays a role in the regulation of phosphate uptake K02039 - - 0.000000000000000000000000000000000000000000000000000000000000000000006588 241.0
DPH3_k127_6185157_4 - - - - 0.0000000000000000000000000000000000002526 148.0
DPH3_k127_6185157_5 phosphate transport system permease K02038 - - 0.00000000003453 64.0
DPH3_k127_6187715_0 acetyl-CoA K18122,K18288 - - 1.147e-273 855.0
DPH3_k127_6187715_1 BPG-independent PGAM N-terminus (iPGM_N) K15633 - 5.4.2.12 2.28e-206 649.0
DPH3_k127_6187715_2 PFAM Aldehyde dehydrogenase K00128,K00135 - 1.2.1.16,1.2.1.20,1.2.1.3,1.2.1.79 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001342 520.0
DPH3_k127_6187715_3 Transfers the N-acyl diglyceride group on what will become the N-terminal cysteine of membrane lipoproteins K13292 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003002 386.0
DPH3_k127_6187715_4 Molybdopterin guanine dinucleotide synthesis protein B K03753,K13818 - 2.7.7.77 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000005881 287.0
DPH3_k127_6187715_5 Transfers a GMP moiety from GTP to Mo-molybdopterin (Mo- MPT) cofactor (Moco or molybdenum cofactor) to form Mo- molybdopterin guanine dinucleotide (Mo-MGD) cofactor K03752 - 2.7.7.77 0.0000000000000000000000000000000000000000000000000000000000000000000000001372 252.0
DPH3_k127_6187715_6 - - - - 0.00000000000000000000000000000000000000004212 157.0
DPH3_k127_6187715_7 - - - - 0.00000000001384 72.0
DPH3_k127_6196465_0 His Kinase A (phosphoacceptor) domain - - - 3.432e-227 714.0
DPH3_k127_6219482_0 Type II secretion system (T2SS), protein E, N-terminal domain K02652 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003829 521.0
DPH3_k127_6219482_1 Type II secretion system (T2SS), protein F K02455,K02653 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005611 324.0
DPH3_k127_6219482_2 - K02450 - - 0.0000000000000000000000000000000000000000007314 161.0
DPH3_k127_6236121_0 Sulfite exporter TauE/SafE K07090 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001189 334.0
DPH3_k127_6236121_1 phosphorelay sensor kinase activity K03406 - - 0.00000000000000000000000000000000000000000000000000000000008282 210.0
DPH3_k127_6236121_2 sigma54 specific, transcriptional regulator, Fis family K02481 - - 0.000000000000000007103 85.0
DPH3_k127_6236121_3 Domain of unknown function (DUF374) K09778 - - 0.0001422 45.0
DPH3_k127_6237288_0 CoA-transferase family III - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001352 552.0
DPH3_k127_6237288_1 Belongs to the 5'-nucleotidase family K11751,K17224 - 3.1.3.5,3.6.1.45 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000233 537.0
DPH3_k127_6237288_2 PFAM aminotransferase, class I and II K00812 - 2.6.1.1 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001208 451.0
DPH3_k127_6237288_3 acyl-CoA transferases carnitine dehydratase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001529 395.0
DPH3_k127_6237288_4 response regulator - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001823 387.0
DPH3_k127_6237288_5 FMN binding - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000002049 293.0
DPH3_k127_6237288_6 CoA-transferase family III - - - 0.000000000000000000000001421 104.0
DPH3_k127_6237288_7 - - - - 0.00000000000005328 73.0
DPH3_k127_6247880_0 Acetyl-coenzyme A transporter 1 K08218 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003093 574.0
DPH3_k127_6247880_1 Elongator protein 3, MiaB family, Radical SAM K01843 - 5.4.3.2 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003791 407.0
DPH3_k127_6247880_2 Sensor diguanylate cyclase, PAS domain-containing - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001005 345.0
DPH3_k127_6247880_3 Metallo-beta-lactamase superfamily - - - 0.0000000000000000000000000000000000000000000000000003404 185.0
DPH3_k127_6247880_4 Domain of unknown function (DUF296) - - - 0.00000000000000000000000000000000000000000000000003628 183.0
DPH3_k127_6247880_5 Involved in the cellular defense against the biological effects of O6-methylguanine (O6-MeG) and O4-methylthymine (O4-MeT) in DNA. Repairs the methylated nucleobase in DNA by stoichiometrically transferring the methyl group to a cysteine residue in the enzyme. This is a suicide reaction the enzyme is irreversibly inactivated K00567,K10778 - 2.1.1.63 0.000000000000000000000000000000000000000009398 160.0
DPH3_k127_6247880_6 TIGRFAM regulatory protein, FmdB family - - - 0.000000000000000000000000000000000000005026 147.0
DPH3_k127_6255615_0 phosphatidylinositol metabolic process K00728 - 2.4.1.109 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000001664 296.0
DPH3_k127_6255615_1 Pyridine nucleotide-disulphide oxidoreductase - - - 0.00000000000000000000000000001502 119.0
DPH3_k127_6255615_2 Pyridine nucleotide-disulphide oxidoreductase K03388 - 1.8.7.3,1.8.98.4,1.8.98.5,1.8.98.6 0.00000000000000000000000004648 108.0
DPH3_k127_6255615_3 response regulator - - - 0.00000000000000000006566 92.0
DPH3_k127_6260527_0 Domain of unknown function (DUF4881) - - - 0.000000000000000000000000000000000000000000000000000000000000000000002621 240.0
DPH3_k127_6260527_1 PFAM Pyruvate phosphate dikinase, PEP K01007 - 2.7.9.2 0.0000000000000000000000000000000000000000000000000000000000004303 213.0
DPH3_k127_6260527_2 - - - - 0.00000000000000000000007416 110.0
DPH3_k127_6260527_3 - - - - 0.00000006509 60.0
DPH3_k127_6283890_0 peptidyl-lysine modification to peptidyl-hypusine - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003675 408.0
DPH3_k127_6283890_1 Catalyzes the isomerization of sedoheptulose 7-phosphate in D-glycero-D-manno-heptose 7-phosphate K03271 - 5.3.1.28 0.00000000000000000000000000000000000000000000000000000000000000000000000002338 255.0
DPH3_k127_6283890_2 Cyclophilin-like K09143 - - 0.000000000000000000000000000000000000000000166 162.0
DPH3_k127_6283890_3 PFAM aminotransferase, class IV K00826 - 2.6.1.42 0.0000000000000000000000000000000000000002053 152.0
DPH3_k127_6283890_4 Putative regulatory protein - - - 0.00000000000000000000005593 100.0
DPH3_k127_6307985_0 Response regulator receiver K01338 - 3.4.21.53 1.32e-312 969.0
DPH3_k127_6307985_1 Bacterial regulatory protein, Fis family K07713 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000489 584.0
DPH3_k127_6307985_10 Belongs to the UPF0434 family K09791 - - 0.000000000000000000000007059 103.0
DPH3_k127_6307985_11 Belongs to the universal stress protein A family - - - 0.000000000000000000003267 104.0
DPH3_k127_6307985_2 Major Facilitator Superfamily K08224 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004203 484.0
DPH3_k127_6307985_3 An essential GTPase which binds GTP, GDP and possibly (p)ppGpp with moderate affinity, with high nucleotide exchange rates and a fairly low GTP hydrolysis rate. Plays a role in control of the cell cycle, stress response, ribosome biogenesis and in those bacteria that undergo differentiation, in morphogenesis control K03979 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002014 459.0
DPH3_k127_6307985_4 phosphorelay signal transduction system K02481,K07713,K07714 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003382 445.0
DPH3_k127_6307985_5 Catalyzes the ADP transfer from ATP to D-glycero-beta-D- manno-heptose 1-phosphate, yielding ADP-D-glycero-beta-D-manno- heptose K03272 GO:0000271,GO:0003674,GO:0003824,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005975,GO:0005976,GO:0006629,GO:0006793,GO:0006796,GO:0008150,GO:0008152,GO:0008610,GO:0008653,GO:0008713,GO:0008920,GO:0009058,GO:0009059,GO:0009103,GO:0009244,GO:0009311,GO:0009312,GO:0009987,GO:0016051,GO:0016301,GO:0016310,GO:0016740,GO:0016757,GO:0016772,GO:0019200,GO:0033692,GO:0034637,GO:0034645,GO:0043170,GO:0044237,GO:0044238,GO:0044249,GO:0044255,GO:0044260,GO:0044262,GO:0044264,GO:0044424,GO:0044444,GO:0044464,GO:0046401,GO:0046835,GO:0071704,GO:1901135,GO:1901137,GO:1901576,GO:1903509 2.7.1.167,2.7.7.70 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001324 322.0
DPH3_k127_6307985_6 Pfam Adenylate and Guanylate cyclase catalytic domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000002847 272.0
DPH3_k127_6307985_7 This protein binds to 23S rRNA in the presence of protein L20 K02888 GO:0003674,GO:0003735,GO:0005198 - 0.000000000000000000000000000000000000002518 151.0
DPH3_k127_6307985_8 Belongs to the bacterial ribosomal protein bL27 family K02899 GO:0003674,GO:0003735,GO:0005198,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0015934,GO:0022625,GO:0022626,GO:0032991,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:1990904 - 0.0000000000000000000000000000000001132 133.0
DPH3_k127_6307985_9 YGGT family K02221 - - 0.000000000000000000000000000000002448 131.0
DPH3_k127_6315884_0 Belongs to the class-II pyridine nucleotide-disulfide oxidoreductase family K00384 - 1.8.1.9 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001455 420.0
DPH3_k127_6315884_1 MFS_1 like family - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005506 414.0
DPH3_k127_6315884_2 Methyltransferase required for the conversion of demethylmenaquinol (DMKH2) to menaquinol (MKH2) and the conversion of 2-polyprenyl-6-methoxy-1,4-benzoquinol (DDMQH2) to 2- polyprenyl-3-methyl-6-methoxy-1,4-benzoquinol (DMQH2) K03183 - 2.1.1.163,2.1.1.201 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000272 359.0
DPH3_k127_6315884_3 Part of the outer membrane protein assembly complex, which is involved in assembly and insertion of beta-barrel proteins into the outer membrane K05807 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000005776 282.0
DPH3_k127_6315884_4 Mycolic acid cyclopropane synthetase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000483 240.0
DPH3_k127_6315884_5 Belongs to the thioredoxin family K03671 - - 0.0000000000000000000000000000000000000000000000000000001289 196.0
DPH3_k127_6315884_6 Facilitates transcription termination by a mechanism that involves Rho binding to the nascent RNA, activation of Rho's RNA-dependent ATPase activity, and release of the mRNA from the DNA template K03628 - - 0.000000000000000000000000000006072 121.0
DPH3_k127_6348184_0 BadF BadG BcrA BcrD - - - 0.0 1433.0
DPH3_k127_6348184_1 Methyl-viologen-reducing hydrogenase, delta subunit K16886 - - 0.0 1160.0
DPH3_k127_6348184_10 PFAM HhH-GPD superfamily base excision DNA repair protein K07457 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000006724 290.0
DPH3_k127_6348184_11 SurA N-terminal domain K03769 - 5.2.1.8 0.000000000000000000000000000000000000000000000000000000000000000000000000000000002006 284.0
DPH3_k127_6348184_12 Methionine biosynthesis protein MetW - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000003327 278.0
DPH3_k127_6348184_13 Transcriptional regulator, MerR family - - - 0.0000000000000000000000000000000000000000000000000000000000000002432 225.0
DPH3_k127_6348184_14 Catalyzes the condensation of the acetyl group of acetyl-CoA with 3-methyl-2-oxobutanoate (2-oxoisovalerate) to form 3-carboxy-3-hydroxy-4-methylpentanoate (2-isopropylmalate) K01649 - 2.3.3.13 0.00000000000000000000000000000000000000000000000001333 186.0
DPH3_k127_6348184_15 FAD dependent oxidoreductase K16885 - - 0.000000000000000000000000000000000000000000004262 166.0
DPH3_k127_6348184_16 - - - - 0.000000000000000000000000000000000000000004349 162.0
DPH3_k127_6348184_17 PFAM ROSMUCR transcriptional regulator - - - 0.00000000000000000000000000000000000000001139 159.0
DPH3_k127_6348184_2 Belongs to the IlvD Edd family K01687 - 4.2.1.9 3.676e-285 884.0
DPH3_k127_6348184_3 4Fe-4S dicluster domain K16887 - - 3.099e-200 628.0
DPH3_k127_6348184_4 4 iron, 4 sulfur cluster binding - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001375 593.0
DPH3_k127_6348184_5 TIGRFAM ribonuclease, Rne Rng family K08300,K08301 - 3.1.26.12 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001724 529.0
DPH3_k127_6348184_6 PFAM Radical SAM K04069 - 1.97.1.4 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002433 460.0
DPH3_k127_6348184_7 Possible lysine decarboxylase K06966 - 3.2.2.10 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001485 351.0
DPH3_k127_6348184_8 Putative RNA-binding Domain in PseudoUridine synthase and Archaeosine transglycosylase K06969 - 2.1.1.191 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002255 351.0
DPH3_k127_6348184_9 Radical SAM domain protein - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008475 338.0
DPH3_k127_6380893_0 Quinolinate phosphoribosyl transferase, C-terminal domain K00767 - 2.4.2.19 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002849 354.0
DPH3_k127_6380893_1 NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient K00331 - 1.6.5.3 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009064 316.0
DPH3_k127_6380893_2 Catalyzes the reduction of 1-pyrroline-5-carboxylate (PCA) to L-proline K00286 - 1.5.1.2 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003213 317.0
DPH3_k127_6380893_3 amino acids such as threonine, to avoid such errors, it has a posttransfer editing activity that hydrolyzes mischarged Thr-tRNA(Val) in a tRNA-dependent manner K01873 GO:0003674,GO:0003824,GO:0004812,GO:0004832,GO:0006082,GO:0006139,GO:0006399,GO:0006412,GO:0006418,GO:0006438,GO:0006518,GO:0006520,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0016070,GO:0016874,GO:0016875,GO:0019538,GO:0019752,GO:0034641,GO:0034645,GO:0034660,GO:0043038,GO:0043039,GO:0043043,GO:0043170,GO:0043436,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044281,GO:0046483,GO:0071704,GO:0090304,GO:0140098,GO:0140101,GO:1901360,GO:1901564,GO:1901566,GO:1901576 6.1.1.9 0.000000000000002391 78.0
DPH3_k127_6380893_4 Respiratory-chain NADH dehydrogenase, 30 Kd subunit K00332 - 1.6.5.3 0.000000000000006721 80.0
DPH3_k127_6386397_0 Diguanylate cyclase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002079 537.0
DPH3_k127_6386397_1 A type II topoisomerase that negatively supercoils closed circular double-stranded (ds) DNA in an ATP-dependent manner to modulate DNA topology and maintain chromosomes in an underwound state. Negative supercoiling favors strand separation, and DNA replication, transcription, recombination and repair, all of which involve strand separation. Also able to catalyze the interconversion of other topological isomers of dsDNA rings, including catenanes and knotted rings. Type II topoisomerases break and join 2 DNA strands simultaneously in an ATP-dependent manner K02469,K02621 GO:0000819,GO:0003674,GO:0003676,GO:0003677,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005886,GO:0006139,GO:0006259,GO:0006265,GO:0006276,GO:0006725,GO:0006807,GO:0006996,GO:0007049,GO:0007059,GO:0007062,GO:0008150,GO:0008152,GO:0009330,GO:0009987,GO:0016020,GO:0016043,GO:0019897,GO:0019898,GO:0022402,GO:0030541,GO:0032991,GO:0034641,GO:0043170,GO:0044237,GO:0044238,GO:0044260,GO:0044424,GO:0044425,GO:0044444,GO:0044459,GO:0044464,GO:0046483,GO:0051276,GO:0071103,GO:0071704,GO:0071840,GO:0071944,GO:0090304,GO:0097159,GO:0098813,GO:1901360,GO:1901363 5.99.1.3 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000229 305.0
DPH3_k127_6386397_2 cyclic nucleotide-binding K10914 - - 0.000000000000000000000000000000000000000000000000000000000000000000002809 246.0
DPH3_k127_6386397_3 PFAM Type IV pilus assembly PilZ - - - 0.000000000000000000000000000002928 123.0
DPH3_k127_640540_0 SNARE associated Golgi protein - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001655 319.0
DPH3_k127_640540_1 Beta-lactamase enzyme family K07258,K07262 - 3.4.16.4 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000003827 311.0
DPH3_k127_640540_2 4Fe-4S binding domain - - - 0.000000000000000000000000000000000000000000000000000001217 193.0
DPH3_k127_6430818_0 Histidine kinase A domain protein - - - 1.691e-224 728.0
DPH3_k127_6430818_1 TRAP transporter solute receptor, TAXI family K07080 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007099 410.0
DPH3_k127_6430818_2 DinB family - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001544 308.0
DPH3_k127_6430818_3 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase - - - 0.00000000000007472 81.0
DPH3_k127_6430818_4 Hydrolase K01560 - 3.8.1.2 0.00000386 51.0
DPH3_k127_6456565_0 PFAM Extracellular ligand-binding receptor K01999 - - 0.0000000000000000000000000000000000000000000000000000000000001293 216.0
DPH3_k127_6456565_1 ATP-binding region ATPase domain protein - - - 0.000000000000000000000000000000000000000000000000000000001339 211.0
DPH3_k127_6456565_3 Histidine kinase A domain protein - - - 0.00000000000000000000000000008032 120.0
DPH3_k127_6460177_0 Alcohol dehydrogenase GroES-like domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000558 335.0
DPH3_k127_6460177_1 PFAM Cys Met metabolism K01760,K01761 - 4.4.1.11,4.4.1.8 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004755 335.0
DPH3_k127_6460177_2 PFAM Glycosyl transferase family 2 - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004087 323.0
DPH3_k127_6460177_3 PFAM NADPH-dependent FMN reductase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000001241 246.0
DPH3_k127_6460177_4 Plasmid pRiA4b ORF-3-like protein - - - 0.00000000000000000000000000000000000000000000000000000001536 203.0
DPH3_k127_6460177_5 PFAM Histidine triad (HIT) protein K02503 - - 0.000000000000000000000000000000000000000000000000000002528 196.0
DPH3_k127_6460177_6 Methylation of the membrane-bound methyl-accepting chemotaxis proteins (MCP) to form gamma-glutamyl methyl ester residues in MCP K00575 - 2.1.1.80 0.000000000000000000000000000000000000000000000000479 182.0
DPH3_k127_6460177_7 Catalyzes the conversion of dihydroorotate to orotate K00254,K02823,K17828 GO:0003674,GO:0003824,GO:0004152,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006139,GO:0006206,GO:0006207,GO:0006220,GO:0006221,GO:0006725,GO:0006753,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009112,GO:0009117,GO:0009165,GO:0009218,GO:0009220,GO:0009259,GO:0009260,GO:0009987,GO:0016491,GO:0016627,GO:0016635,GO:0018130,GO:0019438,GO:0019637,GO:0019693,GO:0019856,GO:0034641,GO:0034654,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0044424,GO:0044464,GO:0046112,GO:0046390,GO:0046483,GO:0055086,GO:0055114,GO:0071704,GO:0072527,GO:0072528,GO:0090407,GO:1901135,GO:1901137,GO:1901293,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576 1.3.1.14,1.3.5.2 0.0000000000000000000000000000001823 124.0
DPH3_k127_647398_0 DSHCT - - - 0.0 1080.0
DPH3_k127_647398_1 Alkaline phosphatase K01077 - 3.1.3.1 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006816 466.0
DPH3_k127_647398_2 Endonuclease/Exonuclease/phosphatase family K01142 - 3.1.11.2 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006855 383.0
DPH3_k127_647398_3 Rubrerythrin - - - 0.000000000000000000000000000000000000000005701 156.0
DPH3_k127_647398_4 Two component signalling adaptor domain K03408 - - 0.000000000000000000000000000000000000000007588 165.0
DPH3_k127_647398_5 Histidine kinase A domain protein - - - 0.000000000000000000000000004163 122.0
DPH3_k127_6491260_0 PFAM Nucleotidyl transferase K00971 - 2.7.7.13 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004615 437.0
DPH3_k127_6491260_1 Part of a stress-induced multi-chaperone system, it is involved in the recovery of the cell from heat-induced damage, in cooperation with DnaK, DnaJ and GrpE K03695 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005009 388.0
DPH3_k127_6491260_2 Seven times multi-haem cytochrome CxxCH - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003045 329.0
DPH3_k127_6491260_3 Thiol-specific peroxidase that catalyzes the reduction of hydrogen peroxide and organic hydroperoxides to water and alcohols, respectively. Plays a role in cell protection against oxidative stress by detoxifying peroxides K11065 - 1.11.1.15 0.00000000000000000000000000000000000000000000000000000000000000000000000000003912 261.0
DPH3_k127_6491260_4 Desulfoferrodoxin ferrous iron-binding K05919 - 1.15.1.2 0.000000000000000000000000000000000000000000000000000000000000002016 218.0
DPH3_k127_6491260_5 Rubrerythrin - - - 0.0000000000000000000000000000000000000000005654 164.0
DPH3_k127_6503339_0 Catalyzes the condensation of (S)-aspartate-beta- semialdehyde (S)-ASA and pyruvate to 4-hydroxy- tetrahydrodipicolinate (HTPA) K01714 - 4.3.3.7 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001301 466.0
DPH3_k127_6503339_1 Involved in the synthesis of meso-diaminopimelate (m-DAP or DL-DAP), required for both lysine and peptidoglycan biosynthesis. Catalyzes the direct conversion of tetrahydrodipicolinate to LL-diaminopimelate K10206 - 2.6.1.83 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002924 457.0
DPH3_k127_6503339_2 Catalyzes the conversion of 4-hydroxy- tetrahydrodipicolinate (HTPA) to tetrahydrodipicolinate K00215 GO:0003674,GO:0003824,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006082,GO:0006520,GO:0006807,GO:0008150,GO:0008152,GO:0008652,GO:0008839,GO:0009058,GO:0009987,GO:0016053,GO:0016491,GO:0016627,GO:0016628,GO:0019752,GO:0019877,GO:0043436,GO:0043648,GO:0043650,GO:0044237,GO:0044238,GO:0044249,GO:0044281,GO:0044283,GO:0044424,GO:0044444,GO:0044464,GO:0046394,GO:0046451,GO:0055114,GO:0071704,GO:1901564,GO:1901566,GO:1901576 1.17.1.8 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003248 369.0
DPH3_k127_6503339_3 Catalyzes the stereoinversion of LL-2,6- diaminoheptanedioate (L,L-DAP) to meso-diaminoheptanedioate (meso- DAP), a precursor of L-lysine and an essential component of the bacterial peptidoglycan K01778 - 5.1.1.7 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001523 366.0
DPH3_k127_6503339_4 Specifically catalyzes the decarboxylation of meso- diaminopimelate (meso-DAP) to L-lysine K01586 - 4.1.1.20 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000002502 280.0
DPH3_k127_6504602_0 ABC transporter K02013,K05776 - 3.6.3.34 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008581 366.0
DPH3_k127_6504602_1 Functions as a peptidoglycan terminase that cleaves nascent peptidoglycan strands endolytically to terminate their elongation K07082 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003038 338.0
DPH3_k127_6504602_2 glucosamine-1-phosphate N-acetyltransferase activity K04042 - 2.3.1.157,2.7.7.23 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002241 323.0
DPH3_k127_6519868_0 PFAM Bile acid sodium symporter K03325 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001804 569.0
DPH3_k127_6519868_1 Predicted permease K07089 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001296 540.0
DPH3_k127_6519868_2 Putative Fe-S cluster - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000005007 293.0
DPH3_k127_6519868_3 PFAM low molecular weight phosphotyrosine protein phosphatase K03741 - 1.20.4.1 0.00000000000000000000000000000000000000000000000000000000009997 210.0
DPH3_k127_6519868_4 Thioredoxin domain - - - 0.00000000000000000000000000000000000000000000000000000939 196.0
DPH3_k127_6519868_5 regulatory protein, arsR K03892 - - 0.00000000000000000000000000000000000000000000005353 171.0
DPH3_k127_6519868_6 redox-active disulfide protein 2 - - - 0.0000000000000000000000002116 107.0
DPH3_k127_6536315_0 TIGRFAM signal peptide peptidase SppA, 36K type K04773 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002638 403.0
DPH3_k127_6536315_1 Xylose isomerase-like TIM barrel - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005122 342.0
DPH3_k127_6536315_2 Cysteine-rich domain - - - 0.00000000000000000000000000000000113 132.0
DPH3_k127_6544888_0 PFAM Type II secretion system protein E K02454 - - 8.197e-263 823.0
DPH3_k127_6544888_1 Phosphoribosylglycinamide synthetase, C domain K01945 - 6.3.4.13 6.953e-224 700.0
DPH3_k127_6544888_2 AAA domain K07321 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000773 360.0
DPH3_k127_6544888_3 MGS-like domain K00602 - 2.1.2.3,3.5.4.10 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005523 317.0
DPH3_k127_6544888_4 General secretion pathway protein F K02455 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000005591 280.0
DPH3_k127_6544888_5 Catalyzes the conversion of N5-carboxyaminoimidazole ribonucleotide (N5-CAIR) to 4-carboxy-5-aminoimidazole ribonucleotide (CAIR) K01588 - 5.4.99.18 0.0000000000000000000000000000000000000000000000000000001249 201.0
DPH3_k127_6544888_6 Telomere recombination K07566 - 2.7.7.87 0.00000000000000000000000000000000000001082 153.0
DPH3_k127_6553083_0 PFAM Radical SAM K22226 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005433 581.0
DPH3_k127_6553083_1 SMART Elongator protein 3 MiaB NifB K22227 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000274 573.0
DPH3_k127_6553083_2 Belongs to the ALAD family K01698 - 4.2.1.24 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002703 522.0
DPH3_k127_6553083_3 Enoyl-CoA hydratase/isomerase K11264 - 4.1.1.41 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002695 356.0
DPH3_k127_6553083_4 IMG reference gene - - - 0.000000000000000000000000000000000000000000000000000000231 201.0
DPH3_k127_6562547_0 Voltage gated chloride channel K03281 - - 1.789e-219 688.0
DPH3_k127_6607956_0 Belongs to the GPAT DAPAT family K00631 - 2.3.1.15 0.0 1201.0
DPH3_k127_6607956_1 Class II release factor RF3, C-terminal domain K02837 GO:0003674,GO:0003676,GO:0003723,GO:0003747,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006412,GO:0006415,GO:0006518,GO:0006807,GO:0008079,GO:0008135,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0016043,GO:0016150,GO:0019538,GO:0022411,GO:0032984,GO:0034641,GO:0034645,GO:0043043,GO:0043170,GO:0043603,GO:0043604,GO:0043624,GO:0043933,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044424,GO:0044444,GO:0044464,GO:0071704,GO:0071840,GO:0097159,GO:1901363,GO:1901564,GO:1901566,GO:1901576 - 1.292e-274 852.0
DPH3_k127_6607956_10 PFAM Rubrerythrin - GO:0003674,GO:0005488,GO:0005506,GO:0043167,GO:0043169,GO:0046872,GO:0046914 - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004845 316.0
DPH3_k127_6607956_11 - - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000737 272.0
DPH3_k127_6607956_12 Iron-sulfur cluster-binding domain K06871 - - 0.000000000000000000000000000000000000000000003958 165.0
DPH3_k127_6607956_13 Belongs to the Fur family K03711,K09825 - - 0.000000000000000000000000000000000000000001965 161.0
DPH3_k127_6607956_14 Belongs to the rubredoxin family - GO:0003674,GO:0003824,GO:0005488,GO:0005506,GO:0006091,GO:0008150,GO:0008152,GO:0008199,GO:0009055,GO:0009987,GO:0016491,GO:0022900,GO:0043167,GO:0043169,GO:0044237,GO:0046872,GO:0046914,GO:0055114 - 0.00000000000000000000000000000003281 125.0
DPH3_k127_6607956_2 4Fe-4S binding domain - - - 6.21e-217 685.0
DPH3_k127_6607956_3 Cytochrome bd terminal oxidase subunit I K00425 - 1.10.3.14 1.623e-205 647.0
DPH3_k127_6607956_4 flavodoxin nitric oxide synthase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007269 599.0
DPH3_k127_6607956_5 Creatinase/Prolidase N-terminal domain K01262,K01271 - 3.4.11.9,3.4.13.9 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002085 503.0
DPH3_k127_6607956_6 TIGRFAM cytochrome d oxidase, subunit II (cydB) K00426 - 1.10.3.14 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001448 468.0
DPH3_k127_6607956_7 HlyD membrane-fusion protein of T1SS K03543 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005122 436.0
DPH3_k127_6607956_8 Outer membrane efflux protein - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001811 431.0
DPH3_k127_6607956_9 Domain of unknown function (DUF362) - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002173 415.0
DPH3_k127_6618544_0 Type VI secretion system, TssF K11896 - - 1.61e-251 788.0
DPH3_k127_6618544_1 Belongs to the ClpA ClpB family K11907 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000666 564.0
DPH3_k127_6618544_2 type VI secretion protein K11895 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000004342 306.0
DPH3_k127_670074_0 nucleic acid binding K03698 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000994 398.0
DPH3_k127_670074_1 PSP1 C-terminal conserved region - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001911 380.0
DPH3_k127_670074_2 Is required not only for elongation of protein synthesis but also for the initiation of all mRNA translation through initiator tRNA(fMet) aminoacylation K01874 - 6.1.1.10 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000019 302.0
DPH3_k127_670074_3 Belongs to the UPF0173 family - - - 0.0000000000000000000000000000000000000000002276 162.0
DPH3_k127_670074_4 DNA polymerase III, delta subunit K02341 - 2.7.7.7 0.000000000000000000000000000000000000000247 162.0
DPH3_k127_6717119_0 PFAM glycyl-tRNA synthetase, alpha subunit K01878 - 6.1.1.14 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003413 528.0
DPH3_k127_6717119_1 Glycyl-tRNA synthetase beta subunit K01879 - 6.1.1.14 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003675 497.0
DPH3_k127_6725469_0 PAS fold - - - 0.00000000000000000000000000000000000000000000003176 193.0
DPH3_k127_6725469_1 His Kinase A (phosphoacceptor) domain - - - 0.0000000000000000000000000001033 134.0
DPH3_k127_6762704_0 Belongs to the prokaryotic molybdopterin-containing oxidoreductase family - - - 1.128e-302 942.0
DPH3_k127_6762704_1 Methyltransferase domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000498 317.0
DPH3_k127_6768652_0 Histidine kinase K13587 - 2.7.13.3 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001857 398.0
DPH3_k127_6768652_1 Core component of the KaiABC clock protein complex, which constitutes the main circadian regulator in cyanobacteria. Binds to DNA. The KaiABC complex may act as a promoter-nonspecific transcription regulator that represses transcription, possibly by acting on the state of chromosome compaction - - - 0.00000000000000000000000006715 111.0
DPH3_k127_6768652_2 - - - - 0.000000000000000000008637 99.0
DPH3_k127_6768652_3 EF-hand domain pair - - - 0.0000000000159 68.0
DPH3_k127_6796225_0 Capsule synthesis protein K07282 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001333 422.0
DPH3_k127_6796225_1 von Willebrand factor type A domain K07114 - - 0.000000000000000000000000000000232 143.0
DPH3_k127_6796225_2 Iron-sulfur cluster binding domain of dihydroorotate dehydrogenase B - - - 0.0000000000000001864 82.0
DPH3_k127_6796225_3 von Willebrand factor (vWF) type A domain K07114 - - 0.0000000000004185 83.0
DPH3_k127_6829911_0 Arylsulfotransferase (ASST) - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008107 515.0
DPH3_k127_6829911_1 COG COG1249 Pyruvate 2-oxoglutarate dehydrogenase complex, dihydrolipoamide dehydrogenase (E3) component, and related enzymes K00382 - 1.8.1.4 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001744 464.0
DPH3_k127_6829911_2 Belongs to the ArsC family K04069 - 1.97.1.4 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000004184 289.0
DPH3_k127_6961123_0 helicase domain protein - - - 0.0 1269.0
DPH3_k127_6961123_1 carbamoyl transferase, NodU family K00612 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001231 600.0
DPH3_k127_6961123_2 Catalyzes the irreversible transfer of a propylamine group from the amino donor S-adenosylmethioninamine (decarboxy- AdoMet) to putrescine (1,4-diaminobutane) to yield spermidine K00797 - 2.5.1.16 0.00000000000000000000000000000000000000000000001166 196.0
DPH3_k127_6965158_0 Protein of unknown function (DUF933) K06942 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001677 477.0
DPH3_k127_6965158_1 PFAM Uncharacterised protein family UPF0150 - - - 0.000000000000000000006194 94.0
DPH3_k127_6965158_2 - - - - 0.00000000000001005 82.0
DPH3_k127_6974210_0 Catalyzes the reduction of ribonucleotides to deoxyribonucleotides. May function to provide a pool of deoxyribonucleotide precursors for DNA repair during oxygen limitation and or for immediate growth after restoration of oxygen K00525 - 1.17.4.1 0.0 1209.0
DPH3_k127_6974210_1 Bifunctional enzyme that catalyzes the epimerization of the S- and R-forms of NAD(P)HX and the dehydration of the S-form of NAD(P)HX at the expense of ADP, which is converted to AMP. This allows the repair of both epimers of NAD(P)HX, a damaged form of NAD(P)H that is a result of enzymatic or heat-dependent hydration K17758,K17759 - 4.2.1.136,5.1.99.6 1.996e-227 715.0
DPH3_k127_6974210_2 UbiA prenyltransferase family - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004249 318.0
DPH3_k127_6974210_3 DNA repair enzyme involved in the repair of deaminated bases. Selectively cleaves double-stranded DNA at the second phosphodiester bond 3' to a deoxyinosine leaving behind the intact lesion on the nicked DNA K05982 - 3.1.21.7 0.000000000000000000000000000000000000000000000000000000000000000000000000000006673 268.0
DPH3_k127_6974210_4 Threonylcarbamoyl adenosine biosynthesis protein TsaE K06925 - - 0.000000000000000000000000000000000000000000004552 169.0
DPH3_k127_6974210_5 Transfers the 4'-phosphopantetheine moiety from coenzyme A to a Ser of acyl-carrier-protein K00997 - 2.7.8.7 0.0000000000000000000000000000000000000000271 157.0
DPH3_k127_6974210_6 Catalyzes the complicated ring closure reaction between the two acyclic compounds 1-deoxy-D-xylulose-5-phosphate (DXP) and 3-amino-2-oxopropyl phosphate (1-amino-acetone-3-phosphate or AAP) to form pyridoxine 5'-phosphate (PNP) and inorganic phosphate K03474 GO:0003674,GO:0003824,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006725,GO:0006766,GO:0006767,GO:0006807,GO:0008150,GO:0008152,GO:0008614,GO:0008615,GO:0009058,GO:0009110,GO:0009987,GO:0016740,GO:0016769,GO:0017144,GO:0018130,GO:0019438,GO:0033856,GO:0034641,GO:0042364,GO:0042816,GO:0042819,GO:0044237,GO:0044249,GO:0044271,GO:0044281,GO:0044283,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0051186,GO:0051188,GO:0071704,GO:0072524,GO:0072525,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576,GO:1901615,GO:1901617 2.6.99.2 0.0000000000000000000000000009402 114.0
DPH3_k127_6979233_0 Xanthine and CO dehydrogenases maturation factor, XdhC CoxF K07402 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000001543 260.0
DPH3_k127_6979233_1 PFAM HD domain - - - 0.00000000000000000000000000000000000000000000000354 181.0
DPH3_k127_6979233_2 TIGRFAM thioredoxin K03672 - 1.8.1.8 0.0000000000000000000000000002004 122.0
DPH3_k127_698041_0 The UvrABC repair system catalyzes the recognition and processing of DNA lesions. UvrA is an ATPase and a DNA-binding protein. A damage recognition complex composed of 2 UvrA and 2 UvrB subunits scans DNA for abnormalities. When the presence of a lesion has been verified by UvrB, the UvrA molecules dissociate K03701 - - 0.0 1253.0
DPH3_k127_698041_1 Peptidase M16C associated K06972 - - 0.0 1178.0
DPH3_k127_698041_2 Low-affinity potassium transport system. Interacts with Trk system potassium uptake protein TrkA K03498 - - 2.011e-194 619.0
DPH3_k127_698041_3 His Kinase A (phosphoacceptor) domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003025 587.0
DPH3_k127_698041_4 TrkA-N domain protein K03499 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001784 521.0
DPH3_k127_698041_5 Calcineurin-like phosphoesterase K07098 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005784 336.0
DPH3_k127_698041_6 PFAM DAHP synthetase I KDSA K03856,K04516 - 2.5.1.54,5.4.99.5 0.0000000000000000000000000000000000000000000000000000000000000000000000000002506 259.0
DPH3_k127_698041_7 Histidine kinase-like ATPases - - - 0.00000000000000000000000000000000000000000000000000000000000000009084 252.0
DPH3_k127_698041_8 PFAM ATP-binding region, ATPase domain protein - - - 0.00000000000000000000000000000000000001065 164.0
DPH3_k127_698041_9 - - - - 0.00000000000000006773 87.0
DPH3_k127_6986986_0 A helicase nuclease that prepares dsDNA breaks (DSB) for recombinational DNA repair. Binds to DSBs and unwinds DNA via a highly rapid and processive ATP-dependent bidirectional helicase activity. Unwinds dsDNA until it encounters a Chi (crossover hotspot instigator) sequence from the 3' direction. Cuts ssDNA a few nucleotides 3' to the Chi site. The properties and activities of the enzyme are changed at Chi. The Chi-altered holoenzyme produces a long 3'-ssDNA overhang and facilitates RecA-binding to the ssDNA for homologous DNA recombination and repair. Holoenzyme degrades any linearized DNA that is unable to undergo homologous recombination. In the holoenzyme this subunit recognizes the wild- type Chi sequence, and when added to isolated RecB increases its ATP-dependent helicase processivity K03583 - 3.1.11.5 5.347e-317 1006.0
DPH3_k127_6986986_1 UvrD/REP helicase N-terminal domain K03582,K16898 - 3.1.11.5,3.6.4.12 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002346 410.0
DPH3_k127_6986986_2 AAA domain K03546 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008515 365.0
DPH3_k127_6986986_3 Polysaccharide deacetylase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000001065 253.0
DPH3_k127_6986986_4 ORF6N domain - - - 0.0000000000000000000000000000000000000000000000000000000000004745 216.0
DPH3_k127_6986986_5 PemK-like, MazF-like toxin of type II toxin-antitoxin system K07171 - - 0.000000000000000000000000000000000000000000000000005027 184.0
DPH3_k127_6986986_6 - - - - 0.0000000000000000000000000000000003354 137.0
DPH3_k127_7001921_0 Catalyzes the deamination of 5-methylthioadenosine and S-adenosyl-L-homocysteine into 5-methylthioinosine and S-inosyl-L- homocysteine, respectively. Is also able to deaminate adenosine K12960 - 3.5.4.28,3.5.4.31 1.783e-205 647.0
DPH3_k127_7001921_1 Catalyzes the deamination of 5-methylthioadenosine and S-adenosyl-L-homocysteine into 5-methylthioinosine and S-inosyl-L- homocysteine, respectively. Is also able to deaminate adenosine K12960 - 3.5.4.28,3.5.4.31 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004919 435.0
DPH3_k127_7001921_2 The purine nucleoside phosphorylases catalyze the phosphorolytic breakdown of the N-glycosidic bond in the beta- (deoxy)ribonucleoside molecules, with the formation of the corresponding free purine bases and pentose-1-phosphate K03783 - 2.4.2.1 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000496 349.0
DPH3_k127_701732_0 Permease MlaE K02066 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001219 362.0
DPH3_k127_701732_1 transport system K02065 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001203 334.0
DPH3_k127_701732_2 MlaD protein K02067 - - 0.0000000000000000000000000000000000000000000000000001634 188.0
DPH3_k127_701732_3 antisigma factor binding K04749 - - 0.00000001133 61.0
DPH3_k127_7062462_0 Heat shock 70 kDa protein K04043 - - 0.0 1042.0
DPH3_k127_7062462_1 Negative regulator of class I heat shock genes (grpE- dnaK-dnaJ and groELS operons). Prevents heat-shock induction of these operons K03705 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003078 456.0
DPH3_k127_7062462_2 Participates actively in the response to hyperosmotic and heat shock by preventing the aggregation of stress-denatured proteins, in association with DnaK and GrpE. It is the nucleotide exchange factor for DnaK and may function as a thermosensor. Unfolded proteins bind initially to DnaJ K03687 GO:0000166,GO:0000774,GO:0003674,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0008150,GO:0017076,GO:0030234,GO:0030554,GO:0036094,GO:0044424,GO:0044444,GO:0044464,GO:0050790,GO:0051082,GO:0060589,GO:0060590,GO:0065007,GO:0065009,GO:0097159,GO:0098772,GO:1901265,GO:1901363 - 0.0000000000000000000000000000000000000000000000000004338 192.0
DPH3_k127_7077730_0 Glycosyltransferase family 28 C-terminal domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008661 544.0
DPH3_k127_7077730_1 PFAM Glycosyl transferase, group 1 - - - 0.00000000000000000000000000000000000000000002571 166.0
DPH3_k127_7077730_2 part of a sulfur-relay system - - - 0.0000000000000000003659 90.0
DPH3_k127_7091835_0 oxidoreductase, alpha subunit K00174 - 1.2.7.11,1.2.7.3 5.816e-211 659.0
DPH3_k127_7091835_1 ferredoxin oxidoreductase beta subunit K00175 - 1.2.7.11,1.2.7.3 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001908 482.0
DPH3_k127_7091835_10 Antibiotic biosynthesis monooxygenase - - - 0.000000000000000000000002863 105.0
DPH3_k127_7091835_2 Catalyzes the irreversible transfer of a propylamine group from the amino donor S-adenosylmethioninamine (decarboxy- AdoMet) to putrescine (1,4-diaminobutane) to yield spermidine - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000166 407.0
DPH3_k127_7091835_3 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001411 407.0
DPH3_k127_7091835_4 Nucleotidase that shows phosphatase activity on nucleoside 5'-monophosphates K03787 - 3.1.3.5 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002182 365.0
DPH3_k127_7091835_5 NADPH-dependent FMN reductase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002901 327.0
DPH3_k127_7091835_6 Catalyzes the methyl esterification of L-isoaspartyl residues in peptides and proteins that result from spontaneous decomposition of normal L-aspartyl and L-asparaginyl residues. It plays a role in the repair and or degradation of damaged proteins K00573 - 2.1.1.77 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000001374 289.0
DPH3_k127_7091835_7 Pyruvate ferredoxin/flavodoxin oxidoreductase K00177 - 1.2.7.3 0.00000000000000000000000000000000000000000000000000000000000000000000000000000006748 272.0
DPH3_k127_7091835_8 HDOD domain - - - 0.000000000000000000000000000000000000000000000000000000000000000334 231.0
DPH3_k127_7091835_9 4 iron, 4 sulfur cluster binding K00176,K00528,K03737,K20449 - 1.18.1.2,1.19.1.1,1.2.7.1,1.2.7.3,1.3.7.1 0.0000000000000000000000000000005087 124.0
DPH3_k127_7149436_0 Domain of unknown function (DUF4301) - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001633 494.0
DPH3_k127_7149436_1 Uncharacterised ArCR, COG2043 - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001513 395.0
DPH3_k127_7149436_10 PFAM transglutaminase domain protein - - - 0.0000000000000000000000000000000000000009081 152.0
DPH3_k127_7149436_11 helix_turn_helix, Lux Regulon - - - 0.000000000000000000000000000000000004651 140.0
DPH3_k127_7149436_12 Histidine kinase - - - 0.00000000000000000000000000002243 121.0
DPH3_k127_7149436_13 TIGRFAM Phage SPO1 DNA polymerase-related protein K21929 - 3.2.2.27 0.0000000000000002142 79.0
DPH3_k127_7149436_2 EamA-like transporter family - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000381 355.0
DPH3_k127_7149436_3 ubiE/COQ5 methyltransferase family - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003481 323.0
DPH3_k127_7149436_4 TIGRFAM signal peptidase I K03100 - 3.4.21.89 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000003692 285.0
DPH3_k127_7149436_5 LysE type translocator - - - 0.00000000000000000000000000000000000000000000000000000000000000000000001385 248.0
DPH3_k127_7149436_6 Belongs to the sigma-70 factor family. ECF subfamily K03088 - - 0.000000000000000000000000000000000000000000000000000000000005379 212.0
DPH3_k127_7149436_7 myo-inosose-2 dehydratase activity - - - 0.00000000000000000000000000000000000000000000000006766 186.0
DPH3_k127_7149436_8 PFAM response regulator receiver - - - 0.000000000000000000000000000000000000000000002002 168.0
DPH3_k127_7149436_9 Thioesterase superfamily K02614 - - 0.000000000000000000000000000000000000000007147 160.0
DPH3_k127_7160462_0 GAF domain K01768 - 4.6.1.1 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002958 598.0
DPH3_k127_7160462_1 M42 glutamyl aminopeptidase - - - 0.00000000000000000000000000000000005296 136.0
DPH3_k127_7163125_0 NADH-quinone oxidoreductase, chain M K00342 - 1.6.5.3 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001263 525.0
DPH3_k127_7163125_1 Belongs to the bacterial solute-binding protein 3 family K02030,K10001 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001833 432.0
DPH3_k127_7163125_2 TIGRFAM polar amino acid ABC transporter, inner membrane subunit K02029,K10003 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007009 356.0
DPH3_k127_7163125_3 TIGRFAM polar amino acid ABC transporter, inner membrane subunit K02029,K10002 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001919 344.0
DPH3_k127_7163125_4 NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient K00343 - 1.6.5.3 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002908 322.0
DPH3_k127_7163125_5 PFAM ABC transporter related K02028 - 3.6.3.21 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000564 271.0
DPH3_k127_7163125_6 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus K00341 - 1.6.5.3 0.0000000000004569 73.0
DPH3_k127_7173320_0 C-type lysozyme/alpha-lactalbumin family - - - 0.000000000000000000000000000000005571 138.0
DPH3_k127_7176782_0 Phosphorylase is an important allosteric enzyme in carbohydrate metabolism. Enzymes from different sources differ in their regulatory mechanisms and in their natural substrates. However, all known phosphorylases share catalytic and structural properties K00688 - 2.4.1.1 0.0 1204.0
DPH3_k127_7176782_1 Involved in the gluconeogenesis. Catalyzes the conversion of oxaloacetate (OAA) to phosphoenolpyruvate (PEP) through direct phosphoryl transfer between the nucleoside triphosphate and OAA K01610 GO:0003674,GO:0003824,GO:0004611,GO:0004612,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005975,GO:0005996,GO:0006006,GO:0006094,GO:0008150,GO:0008152,GO:0009058,GO:0016051,GO:0016829,GO:0016830,GO:0016831,GO:0019318,GO:0019319,GO:0044238,GO:0044281,GO:0044283,GO:0044424,GO:0044444,GO:0044464,GO:0046364,GO:0071704,GO:1901576 4.1.1.49 9.828e-232 729.0
DPH3_k127_7176782_2 PFAM Metal-dependent hydrolase HDOD - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002593 452.0
DPH3_k127_7176782_3 Acetyltransferase (GNAT) domain K01905,K09181,K22224 - 6.2.1.13 0.0000000000000000000000000000000000000000000001337 171.0
DPH3_k127_7176782_4 Phosphopantetheine attachment site - - - 0.000000000000000337 83.0
DPH3_k127_7215104_0 DNA-dependent ATPase and ATP-dependent 5'-3' DNA helicase. Has no activity on blunt DNA or DNA with 3'-overhangs, requires at least 10 bases of 5'-ssDNA for helicase activity K03581 - 3.1.11.5 2.998e-313 975.0
DPH3_k127_7215104_1 Belongs to the NAD(P)-dependent epimerase dehydratase family. dTDP-glucose dehydratase subfamily K01710 - 4.2.1.46 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001385 541.0
DPH3_k127_7215104_2 Uncharacterised conserved protein (DUF2156) K01163 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003421 350.0
DPH3_k127_7215104_3 PFAM Pyruvate phosphate dikinase, PEP pyruvate-binding K01006 - 2.7.9.1 0.00000000000000000000000000000000000000000000000000000000000003017 235.0
DPH3_k127_7224476_0 Peptide chain release factor 1 directs the termination of translation in response to the peptide chain termination codons UAG and UAA K02835 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000566 512.0
DPH3_k127_7224476_1 Protein of unknown function (DUF1385) - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001019 326.0
DPH3_k127_7226724_0 Methylene-tetrahydrofolate reductase C terminal - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000347 346.0
DPH3_k127_7226724_1 Methylenetetrahydrofolate reductase K00297,K00547 - 1.5.1.20,2.1.1.10 0.000000000000000000000000000000000000000000000000000000000000000000000000003526 255.0
DPH3_k127_7226724_2 PFAM methyl-viologen-reducing hydrogenase delta subunit - - - 0.000000000000000000000000000000000000000000000001455 176.0
DPH3_k127_7228889_0 PFAM Aminotransferase class I and II K10907 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002135 554.0
DPH3_k127_7228889_1 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002141 428.0
DPH3_k127_7228889_2 Beta-ketoacyl synthase, C-terminal domain K09458 - 2.3.1.179 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005563 422.0
DPH3_k127_7228889_3 Predicted periplasmic protein (DUF2092) - - - 0.0000000000000000000003952 98.0
DPH3_k127_7228889_4 metal ion binding K11793 GO:0000151,GO:0002009,GO:0005575,GO:0005622,GO:0005623,GO:0005634,GO:0005730,GO:0005737,GO:0006464,GO:0006508,GO:0006511,GO:0006807,GO:0007275,GO:0007423,GO:0008150,GO:0008152,GO:0009056,GO:0009057,GO:0009653,GO:0009790,GO:0009887,GO:0009888,GO:0009987,GO:0010498,GO:0016567,GO:0019538,GO:0019941,GO:0030163,GO:0031333,GO:0031461,GO:0031464,GO:0031974,GO:0031981,GO:0032092,GO:0032446,GO:0032459,GO:0032460,GO:0032462,GO:0032463,GO:0032501,GO:0032502,GO:0032879,GO:0032991,GO:0033333,GO:0033334,GO:0033339,GO:0034762,GO:0034763,GO:0034765,GO:0034766,GO:0035107,GO:0035113,GO:0035118,GO:0035138,GO:0035239,GO:0035295,GO:0036211,GO:0042471,GO:0042472,GO:0043161,GO:0043170,GO:0043226,GO:0043227,GO:0043228,GO:0043229,GO:0043231,GO:0043232,GO:0043233,GO:0043254,GO:0043269,GO:0043271,GO:0043393,GO:0043412,GO:0043496,GO:0043583,GO:0043632,GO:0044087,GO:0044093,GO:0044237,GO:0044238,GO:0044248,GO:0044257,GO:0044260,GO:0044265,GO:0044267,GO:0044422,GO:0044424,GO:0044428,GO:0044446,GO:0044464,GO:0048513,GO:0048519,GO:0048523,GO:0048562,GO:0048568,GO:0048598,GO:0048729,GO:0048731,GO:0048736,GO:0048839,GO:0048856,GO:0050789,GO:0050794,GO:0051049,GO:0051051,GO:0051098,GO:0051099,GO:0051128,GO:0051129,GO:0051603,GO:0060173,GO:0060429,GO:0060562,GO:0065007,GO:0065009,GO:0070013,GO:0070647,GO:0071599,GO:0071600,GO:0071704,GO:0080008,GO:0090073,GO:0090596,GO:1901564,GO:1901565,GO:1901575,GO:1902494,GO:1990234 - 0.000000000000000001156 90.0
DPH3_k127_7228889_5 Low molecular weight phosphotyrosine protein phosphatase K03741 - 1.20.4.1 0.0000000000000004969 83.0
DPH3_k127_7252455_0 Plays a role in the flagellum-specific transport system K02419 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000004945 286.0
DPH3_k127_7252455_1 Predicted membrane protein (DUF2238) K08984 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000009644 277.0
DPH3_k127_7252455_2 Role in flagellar biosynthesis K02420,K03227 - - 0.000000000000000000000003706 105.0
DPH3_k127_7252455_3 Bacterial export proteins, family 1 K02421 - - 0.00008087 49.0
DPH3_k127_7273221_0 One of the essential components for the initiation of protein synthesis. Protects formylmethionyl-tRNA from spontaneous hydrolysis and promotes its binding to the 30S ribosomal subunits. Also involved in the hydrolysis of GTP during the formation of the 70S ribosomal complex K02519 - - 0.0 1118.0
DPH3_k127_7273221_1 Participates in both transcription termination and antitermination K02600 - - 2.086e-197 623.0
DPH3_k127_7273221_2 PFAM Basic membrane lipoprotein K07335 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001374 414.0
DPH3_k127_7273221_3 NUDIX domain K01515 - 3.6.1.13 0.000000000000000000000000000000000000000000000000000000000000000000000000000007481 264.0
DPH3_k127_7273221_4 Required for maturation of 30S ribosomal subunits K09748 - - 0.0000000000000000000000000000000000000000000000000000005577 196.0
DPH3_k127_7273221_5 Necessary for efficient RNA polymerase transcription elongation past template-encoded arresting sites. The arresting sites in DNA have the property of trapping a certain fraction of elongating RNA polymerases that pass through, resulting in locked ternary complexes. Cleavage of the nascent transcript by cleavage factors such as GreA or GreB allows the resumption of elongation from the new 3'terminus. GreA releases sequences of 2 to 3 nucleotides K03624 - - 0.000000000000000000000000000000000000000000000000001033 188.0
DPH3_k127_7273221_6 Phospholipid N-methyltransferase - - - 0.0000000000000000000000000000000000002425 142.0
DPH3_k127_7273221_7 Protein of unknown function (DUF503) K09764 - - 0.0000000000001051 72.0
DPH3_k127_7273221_8 Nucleic-acid-binding protein implicated in transcription termination K02600,K07742 - - 0.000000002576 62.0
DPH3_k127_7273221_9 energy transducer activity K03832 - - 0.0003314 43.0
DPH3_k127_7286383_0 CoA-transferase family III K01796 - 5.1.99.4 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006969 572.0
DPH3_k127_7286383_1 Involved in targeting and insertion of nascent membrane proteins into the cytoplasmic membrane. Acts as a receptor for the complex formed by the signal recognition particle (SRP) and the ribosome-nascent chain (RNC). Interaction with SRP-RNC leads to the transfer of the RNC complex to the Sec translocase for insertion into the membrane, the hydrolysis of GTP by both Ffh and FtsY, and the dissociation of the SRP-FtsY complex into the individual components K03110 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005194 459.0
DPH3_k127_7286383_2 4Fe-4S ferredoxin iron-sulfur binding domain protein - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003861 423.0
DPH3_k127_7286383_3 Iron-sulfur cluster-binding domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001282 336.0
DPH3_k127_7286383_4 Required for chromosome condensation and partitioning K03529 - - 0.000000000000000000000000000000000000000000000001286 177.0
DPH3_k127_7286383_5 phenylacetate-CoA ligase activity - - - 0.00000000000000000000104 106.0
DPH3_k127_7304803_0 PFAM ATP-binding region, ATPase domain protein - - - 5.708e-257 806.0
DPH3_k127_7304803_1 phosphonate ABC transporter, periplasmic phosphonate-binding protein K02044 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006024 470.0
DPH3_k127_7304803_2 PFAM Bacterial regulatory protein, Fis family - - - 0.0000000000000000000000000000000003542 134.0
DPH3_k127_7318877_0 Evidence 4 Homologs of previously reported genes of - - - 1.969e-220 691.0
DPH3_k127_7318877_1 Catalyzes the reversible conversion of 3- phosphohydroxypyruvate to phosphoserine and of 3-hydroxy-2-oxo-4- phosphonooxybutanoate to phosphohydroxythreonine K00831 - 2.6.1.52 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001051 572.0
DPH3_k127_7318877_2 Presumably involved in the processing and regular turnover of intracellular proteins. Catalyzes the removal of unsubstituted N-terminal amino acids from various peptides K01255 - 3.4.11.1 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001937 572.0
DPH3_k127_7318877_3 PFAM AMP-dependent synthetase and ligase K01912 - 6.2.1.30 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004056 474.0
DPH3_k127_7318877_4 protein conserved in bacteria - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002902 363.0
DPH3_k127_7318877_5 ubiE/COQ5 methyltransferase family - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006372 326.0
DPH3_k127_7318877_6 PFAM UBA THIF-type NAD FAD binding - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000002418 301.0
DPH3_k127_7318877_7 Archaebacterial flagellin - - - 0.000000000000000000000000000000000000000008887 158.0
DPH3_k127_7366697_0 Catalyzes the ferredoxin-dependent oxidative decarboxylation of arylpyruvates K00179 - 1.2.7.8 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006926 550.0
DPH3_k127_7366697_1 PFAM pyruvate ferredoxin flavodoxin oxidoreductase K00180 - 1.2.7.8 0.00000000000000000000000000000000000000000000000000000000000000000000000003372 254.0
DPH3_k127_7366697_2 - - - - 0.000000000622 63.0
DPH3_k127_7371011_0 The M ring may be actively involved in energy transduction K02409 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003876 334.0
DPH3_k127_7371011_1 flagellar motor switch protein FliG K02410 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003789 310.0
DPH3_k127_7371011_2 PFAM H transporting two-sector ATPase alpha beta subunit central region K02412 - 3.6.3.14 0.000000000000000000000000000000000000000000000000005946 188.0
DPH3_k127_7371011_3 Flagellar biosynthesis type III secretory pathway protein K02411 - - 0.00000000003106 72.0
DPH3_k127_7399513_0 2-oxoacid dehydrogenases acyltransferase (catalytic domain) K00627,K00658 - 2.3.1.12,2.3.1.61 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003558 475.0
DPH3_k127_7399513_1 PFAM Pyridine nucleotide-disulphide oxidoreductase, FAD NAD(P)-binding domain, pyridine nucleotide-disulfide oxidoreductase dimerization region, FAD-dependent pyridine nucleotide-disulfide oxidoreductase K00382 - 1.8.1.4 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000212 304.0
DPH3_k127_7426344_0 transporter of a GTP-driven Fe(2 ) uptake system K04759 - - 7.937e-315 979.0
DPH3_k127_7426344_1 Catalyzes the conversion of 3-deoxy-D-arabino- heptulosonate 7-phosphate (DAHP) to dehydroquinate (DHQ) K01735,K13829 - 2.7.1.71,4.2.3.4 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003724 398.0
DPH3_k127_7426344_2 RNase_H superfamily K07502 - - 0.0000000000000001973 80.0
DPH3_k127_7496566_0 Part of the outer membrane protein assembly complex, which is involved in assembly and insertion of beta-barrel proteins into the outer membrane K07277 - - 3.797e-278 881.0
DPH3_k127_7496566_1 Oxidoreductase family, NAD-binding Rossmann fold K09949 - - 4.52e-265 829.0
DPH3_k127_7496566_10 Outer membrane protein (OmpH-like) K06142 - - 0.0000000000000000000001231 107.0
DPH3_k127_7496566_2 Belongs to the class-II aminoacyl-tRNA synthetase family K04567 - 6.1.1.6 7.722e-236 737.0
DPH3_k127_7496566_3 TIGRFAM Lipoprotein releasing system, transmembrane protein, LolC E family K09808 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001455 521.0
DPH3_k127_7496566_4 Condensation of UDP-2,3-diacylglucosamine and 2,3- diacylglucosamine-1-phosphate to form lipid A disaccharide, a precursor of lipid A, a phosphorylated glycolipid that anchors the lipopolysaccharide to the outer membrane of the cell K00748 GO:0003674,GO:0005488,GO:0005543,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005975,GO:0006629,GO:0006643,GO:0006644,GO:0006664,GO:0006793,GO:0006796,GO:0008150,GO:0008152,GO:0008289,GO:0008610,GO:0008654,GO:0009058,GO:0009245,GO:0009247,GO:0009311,GO:0009312,GO:0009987,GO:0016051,GO:0019637,GO:0043167,GO:0043168,GO:0044237,GO:0044238,GO:0044249,GO:0044255,GO:0044424,GO:0044444,GO:0044464,GO:0046467,GO:0046493,GO:0071704,GO:0090407,GO:1901135,GO:1901137,GO:1901269,GO:1901271,GO:1901576,GO:1903509 2.4.1.182 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003853 423.0
DPH3_k127_7496566_5 Catalyzes the N-acylation of UDP-3-O-acylglucosamine using 3-hydroxyacyl-ACP as the acyl donor. Is involved in the biosynthesis of lipid A, a phosphorylated glycolipid that anchors the lipopolysaccharide to the outer membrane of the cell K02536 GO:0003674,GO:0003824,GO:0005975,GO:0006629,GO:0006643,GO:0006644,GO:0006664,GO:0006793,GO:0006796,GO:0008150,GO:0008152,GO:0008610,GO:0008654,GO:0009058,GO:0009245,GO:0009247,GO:0009311,GO:0009312,GO:0009987,GO:0016051,GO:0016740,GO:0016746,GO:0016747,GO:0019637,GO:0044237,GO:0044238,GO:0044249,GO:0044255,GO:0046467,GO:0046493,GO:0071704,GO:0090407,GO:1901135,GO:1901137,GO:1901269,GO:1901271,GO:1901576,GO:1903509 2.3.1.191 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005371 414.0
DPH3_k127_7496566_6 Part of the ABC transporter complex LolCDE involved in the translocation of mature outer membrane-directed lipoproteins, from the inner membrane to the periplasmic chaperone, LolA. Responsible for the formation of the LolA-lipoprotein complex in an ATP-dependent manner K09810 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002346 314.0
DPH3_k127_7496566_7 Involved in the biosynthesis of lipid A, a phosphorylated glycolipid that anchors the lipopolysaccharide to the outer membrane of the cell K00677 - 2.3.1.129 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001531 308.0
DPH3_k127_7496566_8 Involved in unsaturated fatty acids biosynthesis. Catalyzes the dehydration of short chain beta-hydroxyacyl-ACPs and long chain saturated and unsaturated beta-hydroxyacyl-ACPs K02372 - 4.2.1.59 0.000000000000000000000000000000000000000000000000000000000262 205.0
DPH3_k127_7496566_9 Involved in lipid A export and possibly also in glycerophospholipid export and for biogenesis of the outer membrane. Transmembrane domains (TMD) form a pore in the inner membrane and the ATP-binding domain (NBD) is responsible for energy generation K06147,K11085 - - 0.000000000000000000000000000000000000000000000000653 184.0
DPH3_k127_7516988_0 Glycosyl transferase family 2 - - - 0.0000000000000000000001102 105.0
DPH3_k127_7518297_0 Sigma-70, region 4 K03088 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000502 248.0
DPH3_k127_7518297_1 - - - - 0.00000000000000000000000000000000000000000000000000000000000000000000001881 259.0
DPH3_k127_7518297_2 ORF6N domain - - - 0.000000000000000000000000000000000000000000000000001096 188.0
DPH3_k127_7518297_3 helicase Cas3 K07012 - - 0.0000000000000000000000000000003959 129.0
DPH3_k127_7518297_4 Putative zinc-finger - - - 0.00000000000000001913 94.0
DPH3_k127_7533485_0 Na( ) H( ) antiporter that extrudes sodium in exchange for external protons K03313 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007876 498.0
DPH3_k127_7533485_1 Psort location CytoplasmicMembrane, score 10.00 K01537 - 3.6.3.8 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004329 451.0
DPH3_k127_7533485_2 IMP dehydrogenase activity K00031,K07031 - 1.1.1.42,2.7.1.168 0.0000000000000000000000000000000000000000000009438 173.0
DPH3_k127_7551313_0 Hydrophobe amphiphile Efflux-1 (HAE1) family K03296,K19594 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001263 394.0
DPH3_k127_7551313_1 PFAM Outer membrane efflux protein - - - 0.00004165 46.0
DPH3_k127_763458_0 Belongs to the glyceraldehyde-3-phosphate dehydrogenase family K00134 - 1.2.1.12 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004147 509.0
DPH3_k127_763458_1 PFAM GAF domain protein - - - 0.000000000000000000000000000000000000000000000000000000000000001175 223.0
DPH3_k127_763458_2 COG3437 Response regulator containing a CheY-like receiver domain and an HD-GYP domain K07814 - - 0.00000000000000000000002082 100.0
DPH3_k127_7700039_0 PFAM ferredoxin - - - 5.115e-269 837.0
DPH3_k127_7700039_1 GDSL-like Lipase/Acylhydrolase K10804 - 3.1.1.5 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000002845 278.0
DPH3_k127_7700039_2 serine threonine protein kinase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000004558 241.0
DPH3_k127_7700039_3 Translation initiation factor SUI1 K03113 - - 0.000000000000000000000000000000000000000000003883 166.0
DPH3_k127_7700039_4 PFAM ferredoxin - - - 0.0000000000000000000000000006897 113.0
DPH3_k127_7700039_5 Uncharacterized conserved protein (DUF2196) - - - 0.0000000000000000000477 95.0
DPH3_k127_7701333_0 Sodium/hydrogen exchanger family K03455 - - 6.903e-275 859.0
DPH3_k127_7701333_2 Protein of unknown function (DUF3124) - - - 0.00000000000000218 78.0
DPH3_k127_7705078_0 Homocysteine S-methyltransferase K00547 - 2.1.1.10 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009514 462.0
DPH3_k127_7705078_1 Methyltransferase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000905 289.0
DPH3_k127_7705078_3 cellulase activity - - - 0.00000000000000000000002511 114.0
DPH3_k127_7705078_4 isomerase activity - - - 0.0003346 53.0
DPH3_k127_7739230_0 IGPS catalyzes the conversion of PRFAR and glutamine to IGP, AICAR and glutamate. The HisF subunit catalyzes the cyclization activity that produces IGP and AICAR from PRFAR using the ammonia provided by the HisH subunit K02500 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003676 442.0
DPH3_k127_7739230_1 IGPS catalyzes the conversion of PRFAR and glutamine to IGP, AICAR and glutamate. The HisH subunit provides the glutamine amidotransferase activity that produces the ammonia necessary to HisF for the synthesis of IGP and AICAR K02501 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006836 327.0
DPH3_k127_7739230_2 Iron/manganese superoxide dismutases, C-terminal domain K04564 - 1.15.1.1 0.00000000000000000000000000000000000000000000000000000000000000000000000000000006039 273.0
DPH3_k127_7739230_3 Modifies, by uridylylation and deuridylylation, the PII regulatory proteins (GlnB and homologs), in response to the nitrogen status of the cell that GlnD senses through the glutamine level. Under low glutamine levels, catalyzes the conversion of the PII proteins and UTP to PII-UMP and PPi, while under higher glutamine levels, GlnD hydrolyzes PII-UMP to PII and UMP (deuridylylation). Thus, controls uridylylation state and activity of the PII proteins, and plays an important role in the regulation of nitrogen K00990 - 2.7.7.59 0.000000000000000000000000000000000000000000000000000000000000000001553 235.0
DPH3_k127_7770373_0 Couples transcription and DNA repair by recognizing RNA polymerase (RNAP) stalled at DNA lesions. Mediates ATP-dependent release of RNAP and its truncated transcript from the DNA, and recruitment of nucleotide excision repair machinery to the damaged site K03723 - - 3.505e-231 725.0
DPH3_k127_7770373_1 SurA N-terminal domain K03771 - 5.2.1.8 0.00000000000000000000000000000000000000000000000000000000000003473 227.0
DPH3_k127_7770373_2 sequence-specific DNA binding K15539 - - 0.000000000005627 75.0
DPH3_k127_777327_0 Belongs to the 'phage' integrase family - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002286 474.0
DPH3_k127_777327_1 Isochorismatase family - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001796 375.0
DPH3_k127_777327_2 SMART Elongator protein 3 MiaB NifB K02585 - - 0.00000000000000000000000000000000000000000000000000000000000002548 218.0
DPH3_k127_777327_3 Belongs to the pirin family K06911 - - 0.0000000000000000000000000000000000000000000000000000000145 201.0
DPH3_k127_7823817_0 LysR substrate binding domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005312 417.0
DPH3_k127_7823817_1 belongs to the nudix hydrolase family K03574 - 3.6.1.55 0.00000000000000000000000000000000000000000000002659 178.0
DPH3_k127_7823817_2 Beta-Casp domain K07576 - - 0.0000000000000000000000000000000000000000002051 159.0
DPH3_k127_782455_0 Cation transporter/ATPase, N-terminus K01537 - 3.6.3.8 0.0 1146.0
DPH3_k127_782455_1 Belongs to the AdoMet synthase family K00789 - 2.5.1.6 0.00000000000000000000000000000000000000000000000000000000000000000001017 236.0
DPH3_k127_782455_2 - - - - 0.00000000000000000000000000000000000000000000000000002044 194.0
DPH3_k127_7827097_0 PFAM Alcohol dehydrogenase zinc-binding domain protein - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000021 329.0
DPH3_k127_7827097_1 Glycosyl transferases group 1 - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000001045 281.0
DPH3_k127_7827097_2 sulfuric ester hydrolase activity - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000001715 280.0
DPH3_k127_7827097_3 rRNA (adenine-N6,N6-)-dimethyltransferase activity K00561,K02528 GO:0000154,GO:0000179,GO:0001510,GO:0003674,GO:0003824,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006139,GO:0006364,GO:0006396,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0008168,GO:0008170,GO:0008173,GO:0008649,GO:0008757,GO:0009451,GO:0009987,GO:0010467,GO:0016070,GO:0016072,GO:0016433,GO:0016740,GO:0016741,GO:0022613,GO:0031167,GO:0032259,GO:0034470,GO:0034641,GO:0034660,GO:0042254,GO:0043170,GO:0043412,GO:0043414,GO:0044085,GO:0044237,GO:0044238,GO:0044260,GO:0044424,GO:0044464,GO:0046483,GO:0071704,GO:0071840,GO:0090304,GO:0140098,GO:0140102,GO:1901360 2.1.1.182,2.1.1.184 0.000000000000000000000000000000000000000000000000000001256 204.0
DPH3_k127_7827097_4 GTP cyclohydrolase II K01497 GO:0003674,GO:0003824,GO:0003933,GO:0003935,GO:0005575,GO:0005622,GO:0005623,GO:0005634,GO:0005737,GO:0006766,GO:0006767,GO:0006771,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009110,GO:0009231,GO:0009987,GO:0016787,GO:0016810,GO:0016814,GO:0017144,GO:0018130,GO:0019238,GO:0034641,GO:0042364,GO:0042726,GO:0042727,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0044237,GO:0044249,GO:0044271,GO:0044281,GO:0044283,GO:0044424,GO:0044464,GO:0046483,GO:0071704,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576 3.5.4.25 0.00000000000000000000000000000000000000000000000002373 187.0
DPH3_k127_7827097_5 CDP-alcohol phosphatidyltransferase K00995 - 2.7.8.5 0.000000000000000000000000000000000000000004059 169.0
DPH3_k127_7827097_6 synthase K01737 - 4.1.2.50,4.2.3.12 0.0000000000000000000000000000000000009554 142.0
DPH3_k127_7827097_7 Lysylphosphatidylglycerol synthase TM region K07027 - - 0.000000000000000000000000000001985 135.0
DPH3_k127_791462_0 The UvrABC repair system catalyzes the recognition and processing of DNA lesions. UvrA is an ATPase and a DNA-binding protein. A damage recognition complex composed of 2 UvrA and 2 UvrB subunits scans DNA for abnormalities. When the presence of a lesion has been verified by UvrB, the UvrA molecules dissociate K03701 - - 2.413e-283 895.0
DPH3_k127_791462_1 TIGRFAM ribonuclease, Rne Rng family K08300,K08301 - 3.1.26.12 1.344e-255 796.0
DPH3_k127_791462_10 Uncharacterized protein conserved in bacteria (DUF2344) - - - 0.00000000000001079 78.0
DPH3_k127_791462_2 PFAM aminotransferase class-III K01845 - 5.4.3.8 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006864 601.0
DPH3_k127_791462_3 Histidine kinase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002597 460.0
DPH3_k127_791462_4 it plays a direct role in the translocation of protons across the membrane K02108 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000019 378.0
DPH3_k127_791462_5 Modulates transcription in response to changes in cellular NADH NAD( ) redox state K01926 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002242 370.0
DPH3_k127_791462_6 Bacterial regulatory protein, Fis family - - - 0.000000000000000000000000000000000000000000000000000000000006547 214.0
DPH3_k127_791462_7 F(1)F(0) ATP synthase produces ATP from ADP in the presence of a proton or sodium gradient. F-type ATPases consist of two structural domains, F(1) containing the extramembraneous catalytic core and F(0) containing the membrane proton channel, linked together by a central stalk and a peripheral stalk. During catalysis, ATP synthesis in the catalytic domain of F(1) is coupled via a rotary mechanism of the central stalk subunits to proton translocation K02110 GO:0003674,GO:0003824,GO:0005215,GO:0005575,GO:0005622,GO:0005623,GO:0006139,GO:0006163,GO:0006164,GO:0006725,GO:0006753,GO:0006754,GO:0006793,GO:0006796,GO:0006807,GO:0006810,GO:0006811,GO:0006812,GO:0008150,GO:0008152,GO:0008324,GO:0009058,GO:0009117,GO:0009123,GO:0009124,GO:0009126,GO:0009127,GO:0009141,GO:0009142,GO:0009144,GO:0009145,GO:0009150,GO:0009152,GO:0009156,GO:0009161,GO:0009165,GO:0009167,GO:0009168,GO:0009199,GO:0009201,GO:0009205,GO:0009206,GO:0009259,GO:0009260,GO:0009987,GO:0015075,GO:0015077,GO:0015078,GO:0015318,GO:0015399,GO:0015405,GO:0015672,GO:0015985,GO:0015986,GO:0016020,GO:0016462,GO:0016469,GO:0016787,GO:0016817,GO:0016818,GO:0016887,GO:0017111,GO:0017144,GO:0018130,GO:0019438,GO:0019637,GO:0019693,GO:0019829,GO:0022804,GO:0022853,GO:0022857,GO:0022890,GO:0032991,GO:0033177,GO:0034220,GO:0034641,GO:0034654,GO:0042623,GO:0042625,GO:0042626,GO:0043492,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0044424,GO:0044425,GO:0044464,GO:0044769,GO:0045259,GO:0045263,GO:0046034,GO:0046390,GO:0046483,GO:0046933,GO:0051179,GO:0051234,GO:0055085,GO:0055086,GO:0071704,GO:0072521,GO:0072522,GO:0090407,GO:0090662,GO:0098655,GO:0098660,GO:0098662,GO:0098796,GO:0099131,GO:0099132,GO:1901135,GO:1901137,GO:1901293,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576,GO:1902600 - 0.000000000000000000000000000000004671 132.0
DPH3_k127_791462_9 Putative F0F1-ATPase subunit Ca2+/Mg2+ transporter K02116 - - 0.00000000000000008308 82.0
DPH3_k127_7975371_0 TIGRFAM Arginyl-tRNA synthetase K01887 GO:0003674,GO:0003824,GO:0004812,GO:0004814,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006082,GO:0006139,GO:0006399,GO:0006412,GO:0006418,GO:0006420,GO:0006518,GO:0006520,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0016070,GO:0016874,GO:0016875,GO:0019538,GO:0019752,GO:0034641,GO:0034645,GO:0034660,GO:0043038,GO:0043039,GO:0043043,GO:0043170,GO:0043436,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044281,GO:0044424,GO:0044464,GO:0046483,GO:0071704,GO:0090304,GO:0140098,GO:0140101,GO:1901360,GO:1901564,GO:1901566,GO:1901576 6.1.1.19 2.025e-250 783.0
DPH3_k127_7975371_1 Catalyzes the interconversion of L-alanine and D- alanine. May also act on other amino acids K01775 - 5.1.1.1 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001277 484.0
DPH3_k127_7975371_2 Transfers and isomerizes the ribose moiety from AdoMet to the 7-aminomethyl group of 7-deazaguanine (preQ1-tRNA) to give epoxyqueuosine (oQ-tRNA) K07568 GO:0002097,GO:0002099,GO:0003674,GO:0003824,GO:0006139,GO:0006396,GO:0006399,GO:0006400,GO:0006725,GO:0006807,GO:0008033,GO:0008150,GO:0008152,GO:0008616,GO:0009058,GO:0009116,GO:0009119,GO:0009163,GO:0009451,GO:0009987,GO:0010467,GO:0016070,GO:0016740,GO:0016853,GO:0018130,GO:0019438,GO:0034404,GO:0034470,GO:0034641,GO:0034654,GO:0034660,GO:0042455,GO:0043170,GO:0043412,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0044283,GO:0046116,GO:0046483,GO:0051075,GO:0055086,GO:0071704,GO:0090304,GO:0140098,GO:0140101,GO:1901135,GO:1901137,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576,GO:1901657,GO:1901659 2.4.99.17 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002291 411.0
DPH3_k127_7975371_3 domain, Protein K01181,K08300,K08301 - 3.1.26.12,3.2.1.8 0.0000000000000000000000000000000000001173 152.0
DPH3_k127_7975371_4 Uncharacterized protein conserved in bacteria (DUF2065) K09937 - - 0.0000000000000000004082 88.0
DPH3_k127_801423_0 Catalyzes the GTP-dependent ribosomal translocation step during translation elongation. During this step, the ribosome changes from the pre-translocational (PRE) to the post- translocational (POST) state as the newly formed A-site-bound peptidyl-tRNA and P-site-bound deacylated tRNA move to the P and E sites, respectively. Catalyzes the coordinated movement of the two tRNA molecules, the mRNA and conformational changes in the ribosome K02355 - - 6.809e-241 750.0
DPH3_k127_801423_1 Putative peptidoglycan binding domain K21470 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001817 479.0
DPH3_k127_801423_2 LysM domain protein K07261 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001813 398.0
DPH3_k127_801423_3 Catalyzes the deamination of adenosine to inosine at the wobble position 34 of tRNA(Arg2) K11991 - 3.5.4.33 0.0000000000000000000000000000000000006373 142.0
DPH3_k127_8034800_0 Adenylyl- / guanylyl cyclase, catalytic domain - - - 0.0000000000000000000000000000000000000000000000005408 195.0
DPH3_k127_8034800_1 Pfam SNARE associated Golgi protein - - - 0.00000000000000000002025 93.0
DPH3_k127_8056934_0 PFAM Patatin K07001 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003446 513.0
DPH3_k127_8056934_1 Transposase DDE domain - - - 0.00000000000000000000000000000000000000000006912 164.0
DPH3_k127_8056934_2 Adenylate cyclase - - - 0.000000000000006655 76.0
DPH3_k127_8077585_0 Belongs to the peptidase S16 family K01338,K04076 - 3.4.21.53 0.0 1231.0
DPH3_k127_8077585_1 AAA domain K07028 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000138 530.0
DPH3_k127_8077585_10 - - - - 0.00000000000000000000000000001806 122.0
DPH3_k127_8077585_11 PFAM CobQ CobB MinD ParA nucleotide binding domain K07321 - - 0.00000000000000000000000000001873 119.0
DPH3_k127_8077585_12 Belongs to the UPF0109 family K06960 - - 0.000000000000000000071 94.0
DPH3_k127_8077585_13 PFAM Bacterial regulatory helix-turn-helix protein, lysR family - - - 0.0000000000000000308 84.0
DPH3_k127_8077585_2 PFAM Glycosyl transferase, family 2 K11936 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001761 479.0
DPH3_k127_8077585_3 Converts GTP to 7,8-dihydroneopterin triphosphate K09007 - 3.5.4.16 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008293 422.0
DPH3_k127_8077585_4 PFAM phospholipid glycerol acyltransferase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000851 377.0
DPH3_k127_8077585_5 Response regulator receiver protein - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002597 370.0
DPH3_k127_8077585_6 Xylose isomerase-like TIM barrel - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002146 319.0
DPH3_k127_8077585_7 Outer membrane efflux protein - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000002775 301.0
DPH3_k127_8077585_8 Multidrug resistance efflux - - - 0.000000000000000000000000000000000000236 156.0
DPH3_k127_8077585_9 Thiamine-binding protein - - - 0.0000000000000000000000000000000000004646 142.0
DPH3_k127_8099109_0 Involved in targeting and insertion of nascent membrane proteins into the cytoplasmic membrane. Binds to the hydrophobic signal sequence of the ribosome-nascent chain (RNC) as it emerges from the ribosomes. The SRP-RNC complex is then targeted to the cytoplasmic membrane where it interacts with the SRP receptor FtsY. Interaction with FtsY leads to the transfer of the RNC complex to the Sec translocase for insertion into the membrane, the hydrolysis of GTP by both Ffh and FtsY, and the dissociation of the SRP-FtsY complex into the individual components K03106 - 3.6.5.4 2.86e-216 678.0
DPH3_k127_8099109_1 Catalyzes the NADPH-dependent formation of L-aspartate- semialdehyde (L-ASA) by the reductive dephosphorylation of L- aspartyl-4-phosphate K00133 - 1.2.1.11 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001402 514.0
DPH3_k127_8099109_10 Belongs to the bacterial ribosomal protein bS16 family K02959 GO:0003674,GO:0003735,GO:0005198,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005840,GO:0006412,GO:0006518,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0015935,GO:0019538,GO:0032991,GO:0034641,GO:0034645,GO:0043043,GO:0043170,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044446,GO:0044464,GO:0071704,GO:1901564,GO:1901566,GO:1901576,GO:1990904 - 0.00000000000000000000000000001964 118.0
DPH3_k127_8099109_11 An accessory protein needed during the final step in the assembly of 30S ribosomal subunit, possibly for assembly of the head region. Probably interacts with S19. Essential for efficient processing of 16S rRNA. May be needed both before and after RbfA during the maturation of 16S rRNA. It has affinity for free ribosomal 30S subunits but not for 70S ribosomes K02860 - - 0.0000000000000000000000000002256 121.0
DPH3_k127_8099109_2 Belongs to the RNA methyltransferase TrmD family K00554 GO:0001510,GO:0003674,GO:0003824,GO:0006139,GO:0006396,GO:0006399,GO:0006400,GO:0006725,GO:0006807,GO:0008033,GO:0008150,GO:0008152,GO:0008168,GO:0008173,GO:0008175,GO:0008757,GO:0009019,GO:0009451,GO:0009987,GO:0010467,GO:0016070,GO:0016423,GO:0016740,GO:0016741,GO:0016772,GO:0016779,GO:0030488,GO:0032259,GO:0034470,GO:0034641,GO:0034660,GO:0043170,GO:0043412,GO:0043414,GO:0044237,GO:0044238,GO:0044260,GO:0046483,GO:0050518,GO:0070567,GO:0071704,GO:0090304,GO:0140098,GO:0140101,GO:1901360 2.1.1.228 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008078 364.0
DPH3_k127_8099109_3 PFAM isocitrate isopropylmalate dehydrogenase K00052 - 1.1.1.85 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003057 343.0
DPH3_k127_8099109_4 NADPH-dependent FMN reductase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000005803 295.0
DPH3_k127_8099109_5 Transglycosylase SLT domain K08305 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000006374 279.0
DPH3_k127_8099109_6 Reversibly transfers an adenylyl group from ATP to 4'- phosphopantetheine, yielding dephospho-CoA (dPCoA) and pyrophosphate K00954 GO:0003674,GO:0003824,GO:0004595,GO:0006139,GO:0006163,GO:0006164,GO:0006725,GO:0006732,GO:0006753,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009108,GO:0009117,GO:0009150,GO:0009152,GO:0009165,GO:0009259,GO:0009260,GO:0009987,GO:0015936,GO:0015937,GO:0016740,GO:0016772,GO:0016779,GO:0018130,GO:0019438,GO:0019637,GO:0019693,GO:0033865,GO:0033866,GO:0033875,GO:0034030,GO:0034032,GO:0034033,GO:0034641,GO:0034654,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0046390,GO:0046483,GO:0051186,GO:0051188,GO:0055086,GO:0070566,GO:0071704,GO:0072521,GO:0072522,GO:0090407,GO:1901135,GO:1901137,GO:1901293,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576 2.7.7.3 0.00000000000000000000000000000000000000000000000000000000000000000000001859 244.0
DPH3_k127_8099109_7 Conserved hypothetical protein 95 K08316 - 2.1.1.171 0.000000000000000000000000000000000000000000001727 171.0
DPH3_k127_8099109_8 KH domain K06960 - - 0.0000000000000000000000000000000000575 134.0
DPH3_k127_8099109_9 SAM-dependent RNA methyltransferase - - - 0.000000000000000000000000000000726 125.0
DPH3_k127_810428_0 Bacterial regulatory protein, Fis family - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003546 394.0
DPH3_k127_810428_1 Belongs to the flagella basal body rod proteins family K02388 - - 0.0000000000000000000000000000000000000002563 154.0
DPH3_k127_810428_2 Structural component of flagellum, the bacterial motility apparatus. Part of the rod structure of flagellar basal body K02387 - - 0.000000000004168 74.0
DPH3_k127_810428_3 Flagellar hook-basal body complex protein FliE K02408 - - 0.0000000001445 65.0
DPH3_k127_810428_4 Tetratricopeptide repeat - - - 0.0001143 54.0
DPH3_k127_8110957_0 PFAM Glycosyl transferase, family 20 K00697,K16055 - 2.4.1.15,2.4.1.347,3.1.3.12 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002857 447.0
DPH3_k127_8110957_1 PFAM Glycosyl transferases group 1 K13057 - 2.4.1.245 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001312 303.0
DPH3_k127_8110957_2 Removes the phosphate from trehalose 6-phosphate to produce free trehalose K01087 - 3.1.3.12 0.000000000000000000000000000000000000000000000000000000000000000006041 234.0
DPH3_k127_8134214_0 PP-loop superfamily ATPase - - - 0.0 1212.0
DPH3_k127_8134214_1 - - - - 0.0000000000000000000000000000000000000000000000000000000000000003417 229.0
DPH3_k127_8134214_2 Represses a number of genes involved in the response to DNA damage (SOS response) K01356 - 3.4.21.88 0.00000000000000000000000000000000000000009687 151.0
DPH3_k127_8134214_3 - - - - 0.00000000000003351 74.0
DPH3_k127_8148918_0 PFAM Patatin K07001 - - 1.254e-225 707.0
DPH3_k127_8148918_1 TIGRFAM RND efflux system, outer membrane lipoprotein, NodT - - - 0.000000000000000000000000000000000000000000000000000000002325 206.0
DPH3_k127_8148918_2 Putative MetA-pathway of phenol degradation - - - 0.0000000000001547 70.0
DPH3_k127_8158181_0 Catalyzes the formation of phosphoribosylamine from phosphoribosylpyrophosphate (PRPP) and glutamine K00764 - 2.4.2.14 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009324 486.0
DPH3_k127_8158181_1 peptidase M48, Ste24p - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003462 486.0
DPH3_k127_8158181_2 Domain of unknown function (DUF362) - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002845 469.0
DPH3_k127_8158181_3 Belongs to the SIS family. GutQ KpsF subfamily K06041 - 5.3.1.13 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001146 444.0
DPH3_k127_8158181_4 Catalyzes the NADPH-dependent reduction of 7-cyano-7- deazaguanine (preQ0) to 7-aminomethyl-7-deazaguanine (preQ1) K09457 - 1.7.1.13 0.000000000000000000000000000000000000000000000000000000000007138 211.0
DPH3_k127_816891_0 Pyridoxal-phosphate dependent enzyme K01738,K01883,K12339 - 2.5.1.47,6.1.1.16 0.0 1065.0
DPH3_k127_816891_1 Belongs to the UbiD family K03182 - 4.1.1.98 1.215e-305 945.0
DPH3_k127_816891_10 Radical SAM domain protein K04070 - 1.97.1.4 0.0005913 44.0
DPH3_k127_816891_2 PFAM UbiA prenyltransferase K03179 - 2.5.1.39 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001062 344.0
DPH3_k127_816891_3 PFAM binding-protein-dependent transport systems inner membrane component K02050 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006976 317.0
DPH3_k127_816891_4 ATPases associated with a variety of cellular activities K02049 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002205 308.0
DPH3_k127_816891_5 NMT1-like family K02051 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000005538 289.0
DPH3_k127_816891_6 Catalyzes the NADPH-dependent reduction of ketopantoate into pantoic acid - - - 0.000000000000000000000000000000000000000000000000000000000000000000009105 245.0
DPH3_k127_816891_7 Helix-turn-helix domain K21498 - - 0.00000000000000000000000000000000000000000001834 163.0
DPH3_k127_816891_8 Plasmid maintenance system killer K07334 - - 0.000000000000000000000000000000000000000004155 156.0
DPH3_k127_816891_9 peptidyl-tyrosine sulfation - - - 0.00027 48.0
DPH3_k127_817989_0 Belongs to the prokaryotic molybdopterin-containing oxidoreductase family K08357 - - 1.45e-305 957.0
DPH3_k127_817989_1 Catalyzes the oxidation of L-aspartate to iminoaspartate K00278 - 1.4.3.16 6.143e-264 821.0
DPH3_k127_817989_10 Part of the twin-arginine translocation (Tat) system that transports large folded proteins containing a characteristic twin-arginine motif in their signal peptide across membranes. Together with TatB, TatC is part of a receptor directly interacting with Tat signal peptides K03118 - - 0.00000000000000000000000005774 109.0
DPH3_k127_817989_12 mttA/Hcf106 family K03116,K03117 - - 0.000000000000000005598 92.0
DPH3_k127_817989_13 heat shock protein binding - - - 0.0000000006496 68.0
DPH3_k127_817989_2 PFAM Polysulphide reductase, NrfD K00185 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006656 592.0
DPH3_k127_817989_3 PFAM Cytochrome c assembly protein - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002575 423.0
DPH3_k127_817989_4 ResB-like family K07399 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004551 430.0
DPH3_k127_817989_5 iron-sulfur binding K00184 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001251 406.0
DPH3_k127_817989_6 - - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000007783 278.0
DPH3_k127_817989_7 Cytochrome c7 and related cytochrome c - - - 0.000000000000000000000000000000000000000000000000000000000000000001355 232.0
DPH3_k127_817989_8 Haloacid dehalogenase-like hydrolase K01091 - 3.1.3.18 0.000000000000000000000000000000000000000000000000000000000194 212.0
DPH3_k127_817989_9 - - - - 0.000000000000000000000000000000000000000003296 165.0
DPH3_k127_8185354_0 PFAM EAL domain - - - 3.184e-203 663.0
DPH3_k127_8185354_1 Major Facilitator Superfamily K02575 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003519 364.0
DPH3_k127_8185354_2 Dodecin K09165 - - 0.000000000000000000000000007515 110.0
DPH3_k127_821058_0 Acts both as a biotin-- acetyl-CoA-carboxylase ligase and a repressor K03524 - 6.3.4.15 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002026 354.0
DPH3_k127_821058_1 Joins adenosylcobinamide-GDP and alpha-ribazole to generate adenosylcobalamin (Ado-cobalamin). Also synthesizes adenosylcobalamin 5'-phosphate from adenosylcobinamide-GDP and alpha-ribazole 5'-phosphate K02233 - 2.7.8.26 0.000000000000000000000000003172 115.0
DPH3_k127_821058_2 PFAM CutA1 divalent ion tolerance protein K03926 - - 0.000000000000000000000000007213 114.0
DPH3_k127_821058_3 Hydrolyzes the pyrophosphate bond of UDP-2,3- diacylglucosamine to yield 2,3-diacylglucosamine 1-phosphate (lipid X) and UMP by catalyzing the attack of water at the alpha-P atom. Involved in the biosynthesis of lipid A, a phosphorylated glycolipid that anchors the lipopolysaccharide to the outer membrane of the cell K03269 - 3.6.1.54 0.000008327 50.0
DPH3_k127_8231842_0 catalyzes the demethylation of specific methylglutamate residues introduced into the chemoreceptors (methyl-accepting chemotaxis proteins) by CheR K03412 - 3.1.1.61,3.5.1.44 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001439 339.0
DPH3_k127_8231842_1 Probably deamidates glutamine residues to glutamate on methyl-accepting chemotaxis receptors (MCPs), playing an important role in chemotaxis K03411 - 3.5.1.44 0.0000000000000000000000000000000000000000000000000000000000000000000000404 247.0
DPH3_k127_8231842_2 Diguanylate cyclase - - - 0.000000000000000000000000000000000000000002346 157.0
DPH3_k127_823675_0 Putative RNA methylase family UPF0020 K07444,K12297 - 2.1.1.173,2.1.1.264 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001139 412.0
DPH3_k127_823675_1 PFAM CobQ CobB MinD ParA nucleotide binding domain K07321 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004359 311.0
DPH3_k127_823675_2 - - - - 0.00000000000000000000000000000000000000000000000000000000000000000000213 249.0
DPH3_k127_823675_3 Domain of unknown function (DUF3786) - - - 0.000000000000000000000000000000000000000000000000000000000000006167 224.0
DPH3_k127_823675_4 zinc-ribbon domain - - - 0.00000000000000000000000006874 116.0
DPH3_k127_8239675_0 PFAM ABC transporter K15738 - - 3.299e-214 681.0
DPH3_k127_8239675_1 S1, RNA binding domain K06959 - - 0.000000000000000000000000000000000000000000000000000001802 194.0
DPH3_k127_8239675_2 Translation initiation factor SUI1 K03113 - - 0.0000000000003774 72.0
DPH3_k127_8248193_0 Catalyzes the transfer of the phosphoribosyl group of 5- phosphorylribose-1-pyrophosphate (PRPP) to anthranilate to yield N-(5'-phosphoribosyl)-anthranilate (PRA) K00766 - 2.4.2.18 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005187 524.0
DPH3_k127_8248193_1 PFAM heat shock protein DnaJ domain protein - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006832 347.0
DPH3_k127_8248193_2 amino acid transport K02030 - - 0.000000000146 62.0
DPH3_k127_8265805_0 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster - - - 3.601e-195 624.0
DPH3_k127_8265805_1 TIGRFAM malonyl CoA-acyl carrier protein transacylase K00645 - 2.3.1.39 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002108 381.0
DPH3_k127_8265805_2 Cupin 2, conserved barrel domain protein - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000008135 261.0
DPH3_k127_8265805_3 Pyruvate ferredoxin/flavodoxin oxidoreductase K00172 - 1.2.7.1 0.0000000000000000000000000000000000000000000000000000000000000000000005151 242.0
DPH3_k127_8265805_4 Pyruvate:ferredoxin oxidoreductase core domain II K00169 - 1.2.7.1 0.000000001147 59.0
DPH3_k127_8268110_0 4Fe-4S ferredoxin iron-sulfur binding domain protein K03388 - 1.8.7.3,1.8.98.4,1.8.98.5,1.8.98.6 0.0 1509.0
DPH3_k127_8268110_1 PFAM methyl-viologen-reducing hydrogenase delta subunit - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007353 528.0
DPH3_k127_8268110_2 4Fe-4S binding domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000003582 258.0
DPH3_k127_8268110_3 Methyl-viologen-reducing hydrogenase, delta subunit - - - 0.000000000000000000000000000000005419 128.0
DPH3_k127_8268110_4 FAD dependent oxidoreductase - - - 0.000000000000000000000000102 108.0
DPH3_k127_8268110_5 PFAM methyl-viologen-reducing hydrogenase delta subunit K14127 - 1.8.98.5,1.8.98.6 0.00000000000000003882 83.0
DPH3_k127_8274687_0 PFAM Major Facilitator Superfamily K08177 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001435 490.0
DPH3_k127_8274687_1 Alpha/beta hydrolase family K07019 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001543 393.0
DPH3_k127_8274687_2 Protein kinase domain K12132 - 2.7.11.1 0.00000000000000000000000000000000000000000000000000000000000000000000000000001854 280.0
DPH3_k127_8274687_3 Calcineurin-like phosphoesterase superfamily domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000009175 244.0
DPH3_k127_8274687_4 Peptidase M50 - - - 0.0000000000000000000000000000000000000000000000001502 184.0
DPH3_k127_8274687_5 Acetyltransferase (GNAT) domain - - - 0.000000000000000000000000000000000000000000000002712 180.0
DPH3_k127_8274687_6 Domain of unknown function - - - 0.000000000000000000000000000000000006651 139.0
DPH3_k127_8274687_7 Domain of unknown function - - - 0.0000000000000000000000000004881 119.0
DPH3_k127_8274687_8 - - - - 0.0000000000000000000000000009907 120.0
DPH3_k127_8274687_9 SMART Cold shock protein K03704 - - 0.000000000000000000000000001035 112.0
DPH3_k127_8309088_0 ABC transporter K06020 - 3.6.3.25 4.784e-302 932.0
DPH3_k127_8309088_1 Serine aminopeptidase, S33 K06889 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002551 357.0
DPH3_k127_8309088_2 N-acetylmuramyl-L-alanine amidase, negative regulator of AmpC, AmpD - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004666 323.0
DPH3_k127_8309088_3 - - - - 0.00000000000000000000000000000000000000000000000000001705 192.0
DPH3_k127_8317913_0 PFAM Fimbrial assembly family protein K02461,K02662,K02663,K12289 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003647 394.0
DPH3_k127_8317913_1 protein secretion K02460 - - 0.00000000000000001094 87.0
DPH3_k127_8390435_0 two component, sigma54 specific, transcriptional regulator, Fis family K02481,K07712 - - 3.891e-226 711.0
DPH3_k127_8390435_1 PFAM ATP-binding region ATPase domain protein - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008022 454.0
DPH3_k127_8397212_0 4Fe-4S ferredoxin iron-sulfur binding domain protein K03388 - 1.8.7.3,1.8.98.4,1.8.98.5,1.8.98.6 0.0 1091.0
DPH3_k127_8397212_1 PFAM 4Fe-4S ferredoxin, iron-sulfur binding domain protein K00125 - 1.17.1.9 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000146 507.0
DPH3_k127_8397212_2 PFAM methyl-viologen-reducing hydrogenase delta subunit K14127 - 1.8.98.5,1.8.98.6 0.00000000000000000000000000000000000000000000000000000000000000000001464 236.0
DPH3_k127_8397212_3 4Fe-4S ferredoxin iron-sulfur binding domain protein K03388 - 1.8.7.3,1.8.98.4,1.8.98.5,1.8.98.6 0.000000000000682 68.0
DPH3_k127_8403258_0 Cache domain K02482 - 2.7.13.3 6.865e-241 756.0
DPH3_k127_8403258_1 PFAM CBS domain K04767 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000001203 300.0
DPH3_k127_8403258_2 response regulator K00945,K02282,K15045 - 2.7.4.25 0.00000000000000000000000000000000000000000000000000000000000001961 216.0
DPH3_k127_8403258_3 Universal stress protein family - - - 0.0000000000000000000000000000000000000004575 153.0
DPH3_k127_8403258_4 response regulator - - - 0.000000000000000000000000000000000001648 141.0
DPH3_k127_8403258_5 Response regulator receiver - - - 0.000000000000000000000000000000003213 132.0
DPH3_k127_8403258_6 PFAM CoA-binding domain protein K09181 - - 0.0000000000000000000000000000001432 127.0
DPH3_k127_8403258_7 His Kinase A (phosphoacceptor) domain - - - 0.0000000000000000000000001386 114.0
DPH3_k127_8425304_0 Bacterial regulatory protein, Fis family K02667 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002024 329.0
DPH3_k127_8425304_1 PFAM inositol monophosphatase K01092 - 3.1.3.25 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000003334 286.0
DPH3_k127_846881_0 An RNase that has 5'-3' exonuclease and possibly endonuclease activity. Involved in maturation of rRNA and in some organisms also mRNA maturation and or decay K12574 - - 6.002e-276 857.0
DPH3_k127_846881_1 Ftsk_gamma K03466 - - 2.505e-269 848.0
DPH3_k127_846881_2 Belongs to the 1-acyl-sn-glycerol-3-phosphate acyltransferase family K00655 - 2.3.1.51 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003064 303.0
DPH3_k127_846881_3 - - - - 0.0000000000000000000000000000000000000000000000000002337 188.0
DPH3_k127_846881_4 Single-strand binding protein family K03111 - - 0.000000000000000000000000000000000000000000000002528 177.0
DPH3_k127_846881_5 Catalyzes the NADPH-dependent reduction of glutamyl- tRNA(Glu) to glutamate 1-semialdehyde (GSA) K02492 - 1.2.1.70 0.0000000000000000000000000005583 115.0
DPH3_k127_846881_6 Part of the twin-arginine translocation (Tat) system that transports large folded proteins containing a characteristic twin-arginine motif in their signal peptide across membranes. TatA could form the protein-conducting channel of the Tat system K03116 - - 0.00000000000000004404 83.0
DPH3_k127_8469449_0 Bacterial protein of unknown function (DUF853) K06915 - - 4.595e-276 853.0
DPH3_k127_8469449_1 Radical SAM domain protein - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003961 531.0
DPH3_k127_8469449_2 NmrA-like family K00091 - 1.1.1.219 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003639 458.0
DPH3_k127_8469449_3 polysaccharide deacetylase - - - 0.0000000000000000000000000000000000000000000006321 179.0
DPH3_k127_8469449_4 Carbamoyl-phosphate synthetase large chain, oligomerisation domain K01955 - 6.3.5.5 0.000000000000000000000000000000006906 133.0
DPH3_k127_8474097_0 PFAM Aminotransferase class I and II - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001014 560.0
DPH3_k127_8474097_1 ATP phosphoribosyltransferase K00765 GO:0000105,GO:0003674,GO:0003824,GO:0003879,GO:0006082,GO:0006520,GO:0006547,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0008652,GO:0009058,GO:0009987,GO:0016053,GO:0016740,GO:0016757,GO:0016763,GO:0018130,GO:0019438,GO:0019752,GO:0034641,GO:0043436,GO:0044237,GO:0044238,GO:0044249,GO:0044281,GO:0044283,GO:0046394,GO:0046483,GO:0052803,GO:0071704,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576,GO:1901605,GO:1901607 2.4.2.17 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006381 492.0
DPH3_k127_8474097_2 Necessary for normal cell division and for the maintenance of normal septation K03978 GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0044424,GO:0044444,GO:0044464 - 0.000000000000000000000000000000000000000000000000000000000000000000000000188 252.0
DPH3_k127_8474097_3 Catalyzes the hydrolysis of the adenine ring of phosphoribosyl-AMP K01496,K11755 - 3.5.4.19,3.6.1.31 0.000000000000000000000000000000000000000000000000000005082 193.0
DPH3_k127_8474097_4 Specifically methylates position 2 of adenine 2503 in 23S rRNA and position 2 of adenine 37 in tRNAs K06941 GO:0000154,GO:0001510,GO:0003674,GO:0003824,GO:0006139,GO:0006364,GO:0006396,GO:0006399,GO:0006400,GO:0006725,GO:0006807,GO:0008033,GO:0008150,GO:0008152,GO:0008168,GO:0008173,GO:0008175,GO:0008649,GO:0008757,GO:0009451,GO:0009987,GO:0010467,GO:0016070,GO:0016072,GO:0016740,GO:0016741,GO:0022613,GO:0030488,GO:0031167,GO:0032259,GO:0034470,GO:0034641,GO:0034660,GO:0042254,GO:0043170,GO:0043412,GO:0043414,GO:0044085,GO:0044237,GO:0044238,GO:0044260,GO:0046483,GO:0070475,GO:0071704,GO:0071840,GO:0090304,GO:0140098,GO:0140101,GO:0140102,GO:1901360 2.1.1.192 0.00000000000000000000000000000000000000000000000002181 181.0
DPH3_k127_8474097_5 Tetratricopeptide repeat - - - 0.0000000000000000000000000000000000000000000000001983 186.0
DPH3_k127_8516695_0 PFAM Radical SAM - - - 9.174e-241 756.0
DPH3_k127_8516695_1 Belongs to the MurCDEF family K01924 - 6.3.2.8 8.296e-238 741.0
DPH3_k127_8516695_10 POTRA domain, FtsQ-type K03589 - - 0.000000000000000000003739 103.0
DPH3_k127_8516695_2 Cell division protein that is involved in the assembly of the Z ring. May serve as a membrane anchor for the Z ring K03590 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004477 595.0
DPH3_k127_8516695_3 Catalyzes the addition of meso-diaminopimelic acid to the nucleotide precursor UDP-N-acetylmuramoyl-L-alanyl-D-glutamate (UMAG) in the biosynthesis of bacterial cell-wall peptidoglycan K01928 GO:0000270,GO:0003674,GO:0003824,GO:0006022,GO:0006023,GO:0006024,GO:0006807,GO:0008150,GO:0008152,GO:0008765,GO:0009058,GO:0009059,GO:0009252,GO:0009273,GO:0009987,GO:0016874,GO:0016879,GO:0016881,GO:0030203,GO:0034645,GO:0042546,GO:0043170,GO:0044036,GO:0044038,GO:0044085,GO:0044237,GO:0044249,GO:0044260,GO:0070589,GO:0071554,GO:0071704,GO:0071840,GO:1901135,GO:1901137,GO:1901564,GO:1901566,GO:1901576 6.3.2.13 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001099 551.0
DPH3_k127_8516695_4 Essential cell division protein that forms a contractile ring structure (Z ring) at the future cell division site. The regulation of the ring assembly controls the timing and the location of cell division. One of the functions of the FtsZ ring is to recruit other cell division proteins to the septum to produce a new cell wall between the dividing cells. Binds GTP and shows GTPase activity K03531 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006893 517.0
DPH3_k127_8516695_5 Involved in cell wall formation. Catalyzes the final step in the synthesis of UDP-N-acetylmuramoyl-pentapeptide, the precursor of murein K01929 - 6.3.2.10 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002392 514.0
DPH3_k127_8516695_6 Cell wall formation. Catalyzes the addition of glutamate to the nucleotide precursor UDP-N-acetylmuramoyl-L-alanine (UMA) K01925 - 6.3.2.9 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005819 509.0
DPH3_k127_8516695_7 Cell cycle protein K03588 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000305 476.0
DPH3_k127_8516695_8 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal domain K00075 - 1.3.1.98 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000005689 291.0
DPH3_k127_8516695_9 Penicillin-binding Protein dimerisation domain K03587 - 3.4.16.4 0.0000000000000000000000002459 112.0
DPH3_k127_8532006_0 GXGXG motif - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001302 548.0
DPH3_k127_8532006_1 PFAM Methylenetetrahydrofolate reductase K00297,K00547 - 1.5.1.20,2.1.1.10 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003804 403.0
DPH3_k127_8532006_2 PFAM Methylene-tetrahydrofolate reductase C terminal - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000001304 262.0
DPH3_k127_8603851_0 TIGRFAM argininosuccinate lyase K01755 GO:0003674,GO:0003824,GO:0004056,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006082,GO:0006520,GO:0006525,GO:0006526,GO:0006591,GO:0006807,GO:0008150,GO:0008152,GO:0008652,GO:0009058,GO:0009064,GO:0009084,GO:0009987,GO:0016053,GO:0016829,GO:0016840,GO:0016842,GO:0019752,GO:0042450,GO:0043436,GO:0044237,GO:0044238,GO:0044249,GO:0044281,GO:0044283,GO:0044424,GO:0044464,GO:0046394,GO:0071704,GO:1901564,GO:1901566,GO:1901576,GO:1901605,GO:1901607 4.3.2.1 4.008e-219 687.0
DPH3_k127_8603851_1 Belongs to the argininosuccinate synthase family. Type 1 subfamily K01940 GO:0000050,GO:0000053,GO:0003674,GO:0003824,GO:0004055,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006082,GO:0006520,GO:0006525,GO:0006526,GO:0006575,GO:0006807,GO:0008150,GO:0008152,GO:0008652,GO:0009058,GO:0009064,GO:0009084,GO:0009987,GO:0016053,GO:0016874,GO:0016879,GO:0019627,GO:0019752,GO:0034641,GO:0043436,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0044283,GO:0044424,GO:0044464,GO:0046394,GO:0071704,GO:0071941,GO:0072350,GO:1901564,GO:1901566,GO:1901576,GO:1901605,GO:1901607 6.3.4.5 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001431 584.0
DPH3_k127_8603851_2 Specifically catalyzes the decarboxylation of meso- diaminopimelate (meso-DAP) to L-lysine K01586 - 4.1.1.20 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002792 453.0
DPH3_k127_8603851_3 cellulase activity K06882 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002332 324.0
DPH3_k127_8605443_0 Involved in mRNA degradation. Catalyzes the phosphorolysis of single-stranded polyribonucleotides processively in the 3'- to 5'-direction K00962 GO:0003674,GO:0003676,GO:0003723,GO:0003729,GO:0003824,GO:0004654,GO:0005488,GO:0006139,GO:0006401,GO:0006402,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0009056,GO:0009057,GO:0009892,GO:0009987,GO:0010468,GO:0010605,GO:0010629,GO:0016070,GO:0016071,GO:0016740,GO:0016772,GO:0016779,GO:0019222,GO:0019439,GO:0034641,GO:0034655,GO:0043170,GO:0044237,GO:0044238,GO:0044248,GO:0044260,GO:0044265,GO:0044270,GO:0046483,GO:0046700,GO:0048519,GO:0050789,GO:0060255,GO:0065007,GO:0071704,GO:0090304,GO:0097159,GO:1901360,GO:1901361,GO:1901363,GO:1901575 2.7.7.8 0.0 1022.0
DPH3_k127_8605443_1 PFAM Peptidase M16 - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003245 484.0
DPH3_k127_8605443_2 Responsible for synthesis of pseudouridine from uracil- 55 in the psi GC loop of transfer RNAs K03177 GO:0001522,GO:0003674,GO:0003824,GO:0006139,GO:0006396,GO:0006399,GO:0006400,GO:0006725,GO:0006807,GO:0008033,GO:0008150,GO:0008152,GO:0009451,GO:0009982,GO:0009987,GO:0010467,GO:0016070,GO:0016071,GO:0016556,GO:0016853,GO:0016866,GO:0034470,GO:0034641,GO:0034660,GO:0043170,GO:0043412,GO:0044237,GO:0044238,GO:0046483,GO:0071704,GO:0090304,GO:1901360,GO:1990481 5.4.99.25 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000003669 300.0
DPH3_k127_8605443_3 DHH family K06881 - 3.1.13.3,3.1.3.7 0.0000000000000000000000000000000000000000000000000000000000000000000000000000005378 271.0
DPH3_k127_8605443_4 Ribosomal_S15 K02956 GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0015935,GO:0022626,GO:0022627,GO:0032991,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:1990904 - 0.000000000000000000000000000000000000000003218 157.0
DPH3_k127_8621640_0 PFAM response regulator receiver K07713 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003427 392.0
DPH3_k127_8621640_1 PFAM response regulator receiver - - - 0.0000000000000000000000000000000000000000000000000000009412 214.0
DPH3_k127_8621640_2 TIGRFAM Diguanylate cyclase - - - 0.00000000000000005526 95.0
DPH3_k127_8624817_0 Releases the supercoiling and torsional tension of DNA, which is introduced during the DNA replication and transcription, by transiently cleaving and rejoining one strand of the DNA duplex. Introduces a single-strand break via transesterification at a target site in duplex DNA. The scissile phosphodiester is attacked by the catalytic tyrosine of the enzyme, resulting in the formation of a DNA-(5'-phosphotyrosyl)-enzyme intermediate and the expulsion of a 3'-OH DNA strand. The free DNA strand then undergoes passage around the unbroken strand, thus removing DNA supercoils. Finally, in the religation step, the DNA 3'-OH attacks the covalent intermediate to expel the active-site tyrosine and restore the DNA phosphodiester backbone K03168 - 5.99.1.2 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002626 558.0
DPH3_k127_8624817_1 TIGRFAM DNA protecting protein DprA K04096 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000209 435.0
DPH3_k127_8624817_2 PFAM peptidase U32 K08303 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001211 381.0
DPH3_k127_8658621_0 HD domain K07023 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001141 484.0
DPH3_k127_8658621_1 Catalyzes the transfer of a dimethylallyl group onto the adenine at position 37 in tRNAs that read codons beginning with uridine, leading to the formation of N6-(dimethylallyl)adenosine (i(6)A) K00791 GO:0003674,GO:0003824,GO:0006139,GO:0006396,GO:0006399,GO:0006400,GO:0006725,GO:0006807,GO:0008033,GO:0008150,GO:0008152,GO:0009451,GO:0009987,GO:0010467,GO:0016070,GO:0016740,GO:0016765,GO:0034470,GO:0034641,GO:0034660,GO:0043170,GO:0043412,GO:0044237,GO:0044238,GO:0046483,GO:0052381,GO:0071704,GO:0090304,GO:0140098,GO:0140101,GO:1901360 2.5.1.75 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008861 373.0
DPH3_k127_8658621_2 Belongs to the bacterial ribosomal protein bL28 family K02902 GO:0003674,GO:0003735,GO:0005198 - 0.00000000000000000000002285 102.0
DPH3_k127_8690313_0 Belongs to the prokaryotic molybdopterin-containing oxidoreductase family K08357 - - 0.0 1501.0
DPH3_k127_8690313_1 Probable molybdopterin binding domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000825 489.0
DPH3_k127_8690313_2 Catalyzes the cyclization of GTP to (8S)-3',8-cyclo-7,8- dihydroguanosine 5'-triphosphate K03639 GO:0003674,GO:0003824,GO:0006732,GO:0006777,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009108,GO:0009987,GO:0018130,GO:0019538,GO:0019637,GO:0019720,GO:0043170,GO:0043545,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0046483,GO:0051186,GO:0051188,GO:0051189,GO:0071704,GO:0090407,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576 4.1.99.22 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006058 318.0
DPH3_k127_8690313_3 FmdE, Molybdenum formylmethanofuran dehydrogenase operon K11261 - 1.2.7.12 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000635 284.0
DPH3_k127_8690313_4 Polysulphide reductase, NrfD - - - 0.000000000000000000000000002002 117.0
DPH3_k127_8713319_0 A type II topoisomerase that negatively supercoils closed circular double-stranded (ds) DNA in an ATP-dependent manner to modulate DNA topology and maintain chromosomes in an underwound state. Negative supercoiling favors strand separation, and DNA replication, transcription, recombination and repair, all of which involve strand separation. Also able to catalyze the interconversion of other topological isomers of dsDNA rings, including catenanes and knotted rings. Type II topoisomerases break and join 2 DNA strands simultaneously in an ATP-dependent manner K02470 GO:0003674,GO:0003824,GO:0003916,GO:0003918,GO:0005575,GO:0006139,GO:0006259,GO:0006265,GO:0006725,GO:0006807,GO:0006996,GO:0007059,GO:0008094,GO:0008150,GO:0008152,GO:0009295,GO:0009987,GO:0016043,GO:0016462,GO:0016787,GO:0016817,GO:0016818,GO:0016853,GO:0016887,GO:0017111,GO:0034641,GO:0042623,GO:0043170,GO:0044237,GO:0044238,GO:0044260,GO:0046483,GO:0051276,GO:0061505,GO:0071103,GO:0071704,GO:0071840,GO:0090304,GO:0140097,GO:1901360 5.99.1.3 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001479 611.0
DPH3_k127_8713319_1 A type II topoisomerase that negatively supercoils closed circular double-stranded (ds) DNA in an ATP-dependent manner to modulate DNA topology and maintain chromosomes in an underwound state. Negative supercoiling favors strand separation, and DNA replication, transcription, recombination and repair, all of which involve strand separation. Also able to catalyze the interconversion of other topological isomers of dsDNA rings, including catenanes and knotted rings. Type II topoisomerases break and join 2 DNA strands simultaneously in an ATP-dependent manner K02469,K02621 GO:0000819,GO:0003674,GO:0003676,GO:0003677,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005886,GO:0006139,GO:0006259,GO:0006265,GO:0006276,GO:0006725,GO:0006807,GO:0006996,GO:0007049,GO:0007059,GO:0007062,GO:0008150,GO:0008152,GO:0009330,GO:0009987,GO:0016020,GO:0016043,GO:0019897,GO:0019898,GO:0022402,GO:0030541,GO:0032991,GO:0034641,GO:0043170,GO:0044237,GO:0044238,GO:0044260,GO:0044424,GO:0044425,GO:0044444,GO:0044459,GO:0044464,GO:0046483,GO:0051276,GO:0071103,GO:0071704,GO:0071840,GO:0071944,GO:0090304,GO:0097159,GO:0098813,GO:1901360,GO:1901363 5.99.1.3 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002617 393.0
DPH3_k127_8713319_2 NADPH-dependent FMN reductase K03809 - 1.6.5.2 0.000000000000000000000000000000000000000000000000000000000000000000000000001355 256.0
DPH3_k127_8713319_3 Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released K03086 - - 0.00000008111 53.0
DPH3_k127_8733975_0 beta-lactamase domain protein K06897 - 2.5.1.105 0.000000000000000000000000000000000000000000000000000000000000000000000000001256 264.0
DPH3_k127_8733975_1 PFAM UspA domain protein - - - 0.0000000000000000000000000000000000000367 154.0
DPH3_k127_8733975_2 Rubrerythrin - - - 0.00000000000001603 76.0
DPH3_k127_875138_0 Carboxyl transferase domain K01969,K13778 - 6.4.1.4,6.4.1.5 5.259e-205 646.0
DPH3_k127_875138_1 Acyl-CoA dehydrogenase, C-terminal domain K00253 - 1.3.8.4 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001508 589.0
DPH3_k127_875138_2 PFAM Enoyl-CoA hydratase isomerase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006652 404.0
DPH3_k127_8790965_0 TIGRFAM Nitrogenase molybdenum-iron protein alpha chain K02586 - 1.18.6.1 4.329e-297 920.0
DPH3_k127_8790965_1 This molybdenum-iron protein is part of the nitrogenase complex that catalyzes the key enzymatic reactions in nitrogen fixation K02591 - 1.18.6.1 8.738e-259 801.0
DPH3_k127_8790965_2 The key enzymatic reactions in nitrogen fixation are catalyzed by the nitrogenase complex, which has 2 components the iron protein and the molybdenum-iron protein K02588 - 1.18.6.1 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000025 507.0
DPH3_k127_8790965_3 Belongs to the P(II) protein family K02589 - - 0.0000000000000000000000000000000000000000000000000000000006403 206.0
DPH3_k127_8790965_4 Belongs to the P(II) protein family K02590 - - 0.000000000000000000000000000000000000000000000000000007127 191.0
DPH3_k127_8790965_5 Ferredoxin - - - 0.0000000000000000000000000000000000000000000000000116 182.0
DPH3_k127_8790965_6 CoA-transferase family III - - - 0.000000000000000000008409 93.0
DPH3_k127_8790965_7 Belongs to the NifD NifK NifE NifN family K02587 - - 0.00000000000000002466 84.0
DPH3_k127_879296_0 tRNA synthetase class II core domain (G, H, P, S and T) K01892 - 6.1.1.21 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009134 584.0
DPH3_k127_879296_1 Histidine kinase A domain protein - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001546 406.0
DPH3_k127_879296_2 peptidase inhibitor activity - - - 0.0000000000000000000000001271 114.0
DPH3_k127_8794840_0 NADH-ubiquinone oxidoreductase-F iron-sulfur binding region K00124,K00335,K05587,K18331 - 1.12.1.3,1.6.5.3 2.736e-295 919.0
DPH3_k127_8794840_1 Methyltransferase type 11 - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005391 340.0
DPH3_k127_8794840_10 - - - - 0.000000000000007433 81.0
DPH3_k127_8794840_2 PFAM Glyoxalase bleomycin resistance protein dioxygenase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000006022 291.0
DPH3_k127_8794840_3 Outer membrane efflux protein - - - 0.00000000000000000000000000000000000000000000000000000000000000000002997 252.0
DPH3_k127_8794840_4 Major facilitator superfamily - - - 0.0000000000000000000000000000000000000000000000000000000000000000000984 239.0
DPH3_k127_8794840_5 CHAT domain - - - 0.000000000000000000000000000000000000000000000000000000000000000001576 229.0
DPH3_k127_8794840_6 PFAM NADH dehydrogenase (ubiquinone) 24 kDa subunit K00334 - 1.6.5.3 0.000000000000000000000000000000000000000000000000000000000000007646 222.0
DPH3_k127_8794840_7 formate dehydrogenase (NAD+) activity K00123,K00336 - 1.17.1.9,1.6.5.3 0.000000000000000000000000000000000000000000000000000000183 203.0
DPH3_k127_8794840_8 PFAM CheC domain protein K03409 - - 0.000000000000000000000000000000000000000000000000002438 186.0
DPH3_k127_8794840_9 - - - - 0.0000000000000000000000007207 108.0
DPH3_k127_8821058_0 cytidyltransferase-related domain K00952 - 2.7.7.1 0.000000000000000000000000000000000000000000000000000000000000000000000000000001684 267.0
DPH3_k127_8821058_1 Outer membrane efflux protein - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000001387 272.0
DPH3_k127_8826423_0 Specifically methylates the N7 position of guanine in position 527 of 16S rRNA K03501 - 2.1.1.170 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002659 554.0
DPH3_k127_8826423_1 RNA pseudouridylate synthase K06180 - 5.4.99.23 0.00000000000000000000000000000000000000000000000000000000000000000000000001525 258.0
DPH3_k127_8833664_0 von Willebrand factor, type A K07114 - - 3.131e-284 897.0
DPH3_k127_8891238_0 PFAM ATP-binding region ATPase domain protein K10819 - 2.7.13.3 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001491 415.0
DPH3_k127_8891238_1 PFAM Extracellular ligand-binding receptor - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000268 253.0
DPH3_k127_8902066_0 TIGRFAM ATPase, P-type (transporting), HAD superfamily, subfamily IC - - - 0.0 1155.0
DPH3_k127_8902066_1 TIGRFAM phosphate binding protein K02040 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006506 399.0
DPH3_k127_8902066_10 exodeoxyribonuclease I activity K00390 - 1.8.4.10,1.8.4.8 0.000000000000001099 81.0
DPH3_k127_8902066_11 - - - - 0.0004605 44.0
DPH3_k127_8902066_2 NADPH-dependent FMN reductase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001538 358.0
DPH3_k127_8902066_3 Putative zinc- or iron-chelating domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001845 347.0
DPH3_k127_8902066_4 Uncharacterized protein conserved in bacteria (DUF2333) - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009011 345.0
DPH3_k127_8902066_5 Putative NAD(P)-binding K03499 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000008261 282.0
DPH3_k127_8902066_6 probably responsible for the translocation of the substrate across the membrane K02037 - - 0.00000000000000000000000000000000000000000000000000000000000000000000006878 244.0
DPH3_k127_8902066_7 TrkA-N domain K03499 - - 0.000000000000000000000000000000000000000000000000000000000000001706 227.0
DPH3_k127_8902066_8 PFAM 6-pyruvoyl tetrahydropterin synthase K01737 - 4.1.2.50,4.2.3.12 0.000000000000000000000000000000000000000000000000000001706 194.0
DPH3_k127_8902066_9 probably responsible for the translocation of the substrate across the membrane K02037 - - 0.000000000000000003832 90.0
DPH3_k127_8914689_0 Responsible for the transport of C4-dicarboxylates from the periplasm across the inner membrane K07791 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000503 391.0
DPH3_k127_8914689_1 - - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000003421 258.0
DPH3_k127_8914689_2 - - - - 0.00000000000000009813 85.0
DPH3_k127_8917529_0 Part of the phosphoribosylformylglycinamidine synthase complex involved in the purines biosynthetic pathway. Catalyzes the ATP-dependent conversion of formylglycinamide ribonucleotide (FGAR) and glutamine to yield formylglycinamidine ribonucleotide (FGAM) and glutamate. The FGAM synthase complex is composed of three subunits. PurQ produces an ammonia molecule by converting glutamine to glutamate. PurL transfers the ammonia molecule to FGAR to form FGAM in an ATP-dependent manner. PurS interacts with PurQ and PurL and is thought to assist in the transfer of the ammonia molecule from PurQ to PurL K01952 - 6.3.5.3 0.0 1514.0
DPH3_k127_8917529_1 TIGRFAM phenylalanyl-tRNA synthetase, beta subunit K01890 GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006082,GO:0006139,GO:0006399,GO:0006412,GO:0006418,GO:0006432,GO:0006518,GO:0006520,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009328,GO:0009987,GO:0010467,GO:0016070,GO:0019538,GO:0019752,GO:0032991,GO:0034641,GO:0034645,GO:0034660,GO:0043038,GO:0043039,GO:0043043,GO:0043170,GO:0043436,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044281,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0071704,GO:0090304,GO:1901360,GO:1901564,GO:1901566,GO:1901576,GO:1902494 6.1.1.20 5.781e-310 968.0
DPH3_k127_8917529_10 Regulatory protein - - - 0.000000000000000000000000003475 116.0
DPH3_k127_8917529_2 Belongs to the class-II aminoacyl-tRNA synthetase family. Phe-tRNA synthetase alpha subunit type 1 subfamily K01889 GO:0003674,GO:0003824,GO:0004812,GO:0004826,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006082,GO:0006139,GO:0006399,GO:0006412,GO:0006418,GO:0006432,GO:0006518,GO:0006520,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0016070,GO:0016874,GO:0016875,GO:0019538,GO:0019752,GO:0034641,GO:0034645,GO:0034660,GO:0043038,GO:0043039,GO:0043043,GO:0043170,GO:0043436,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044281,GO:0044424,GO:0044464,GO:0046483,GO:0071704,GO:0090304,GO:0140098,GO:0140101,GO:1901360,GO:1901564,GO:1901566,GO:1901576 6.1.1.20 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005547 520.0
DPH3_k127_8917529_3 CobB/CobQ-like glutamine amidotransferase domain K01952 - 6.3.5.3 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002266 395.0
DPH3_k127_8917529_4 Catalyzes the transfer of a formyl group from 10- formyltetrahydrofolate to 5-phospho-ribosyl-glycinamide (GAR), producing 5-phospho-ribosyl-N-formylglycinamide (FGAR) and tetrahydrofolate K11175 - 2.1.2.2 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002284 320.0
DPH3_k127_8917529_5 Methylates the ribose at the nucleotide 34 wobble position in the two leucyl isoacceptors tRNA(Leu)(CmAA) and tRNA(Leu)(cmnm5UmAA). Catalyzes the methyl transfer from S- adenosyl-L-methionine to the 2'-OH of the wobble nucleotide K03216 - 2.1.1.207 0.000000000000000000000000000000000000000000000000000000000007103 211.0
DPH3_k127_8917529_7 protein kinase activity - - - 0.0000000000000000000000000000000000000000000005655 169.0
DPH3_k127_8917529_8 Catalyzes the ADP transfer from ATP to D-glycero-beta-D- manno-heptose 1-phosphate, yielding ADP-D-glycero-beta-D-manno- heptose - - - 0.00000000000000000000000000000000000000000002502 164.0
DPH3_k127_891784_0 DEAD DEAH box helicase K06877 - - 0.0 1260.0
DPH3_k127_891784_1 Pyruvate phosphate dikinase, PEP/pyruvate binding domain - - - 7.198e-228 727.0
DPH3_k127_891784_10 Protein of unknown function (DUF1499) - - - 0.0000000000000000000000000001775 121.0
DPH3_k127_891784_11 protein conserved in bacteria K09923 - - 0.00000000000000000002545 95.0
DPH3_k127_891784_12 bacterioferritin comigratory protein K03564 - 1.11.1.15 0.0000000000005512 72.0
DPH3_k127_891784_2 PFAM Radical SAM K04070 - 1.97.1.4 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003908 434.0
DPH3_k127_891784_3 Probably deamidates glutamine residues to glutamate on methyl-accepting chemotaxis receptors (MCPs), playing an important role in chemotaxis - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001303 405.0
DPH3_k127_891784_4 3-oxo-5-alpha-steroid 4-dehydrogenase K12343 - 1.3.1.22 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003203 370.0
DPH3_k127_891784_5 Domain of unknown function (DUF1731) K07071 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006094 331.0
DPH3_k127_891784_6 cyclopropane-fatty-acyl-phospholipid synthase K00574 - 2.1.1.79 0.0000000000000000000000000000000000000000000000000000000000000000005297 237.0
DPH3_k127_891784_7 Pfam Pyridoxamine 5'-phosphate - - - 0.0000000000000000000000000000000000000009216 153.0
DPH3_k127_891784_8 Methyltransferase FkbM domain - - - 0.0000000000000000000000000000000000002288 151.0
DPH3_k127_891784_9 Peroxiredoxin K03564 - 1.11.1.15 0.000000000000000000000000000000002354 131.0
DPH3_k127_8953941_0 Tim44 K02117,K08678,K11646,K15539,K17835,K21636 - 1.1.98.6,1.4.1.24,3.6.3.14,3.6.3.15,4.1.1.35,4.1.99.20 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001058 597.0
DPH3_k127_8953941_1 Heterodisulfide reductase subunit B K03389 - 1.8.7.3,1.8.98.4,1.8.98.5,1.8.98.6 0.0000000000000000000000000000000000000000000000000000000000000000000000000137 261.0
DPH3_k127_8953941_2 LemA family K03744 - - 0.00000000000000000000000000000000000000000000000000000001219 204.0
DPH3_k127_8953941_3 COGs COG1150 Heterodisulfide reductase subunit C K03390 - 1.8.7.3,1.8.98.4,1.8.98.5,1.8.98.6 0.00000000000000000000000000000007955 133.0
DPH3_k127_8953941_5 Belongs to the ParA family K04562 - - 0.0000000000967 65.0
DPH3_k127_8972877_0 His Kinase A (phosphoacceptor) domain - - - 6.677e-211 665.0
DPH3_k127_8972877_1 Large extracellular alpha-helical protein K06894 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006441 572.0
DPH3_k127_8972877_2 sigma-54 factor interaction domain-containing protein K07714 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003443 465.0
DPH3_k127_8972877_3 Catalyzes the methyl esterification of L-isoaspartyl residues in peptides and proteins that result from spontaneous decomposition of normal L-aspartyl and L-asparaginyl residues. It plays a role in the repair and or degradation of damaged proteins K00573 GO:0003674,GO:0003824,GO:0004719,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006464,GO:0006479,GO:0006807,GO:0008150,GO:0008152,GO:0008168,GO:0008171,GO:0008213,GO:0008276,GO:0008757,GO:0009987,GO:0010340,GO:0016740,GO:0016741,GO:0019538,GO:0032259,GO:0036211,GO:0043170,GO:0043412,GO:0043414,GO:0044237,GO:0044238,GO:0044260,GO:0044267,GO:0044424,GO:0044464,GO:0051998,GO:0071704,GO:0140096,GO:1901564 2.1.1.77 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002736 323.0
DPH3_k127_8972877_4 PFAM ATP-binding region ATPase domain protein K02482 - 2.7.13.3 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002866 329.0
DPH3_k127_8972877_5 Diguanylate cyclase with GAF sensor - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000001244 302.0
DPH3_k127_8972877_6 Possible lysine decarboxylase K06966 - 3.2.2.10 0.0000000000000000000000000000000000000000000000003021 180.0
DPH3_k127_8972877_7 His Kinase A (phosphoacceptor) domain - - - 0.000000000000000000000000000000000000000003541 159.0
DPH3_k127_8972877_8 PFAM cobalamin B12-binding domain protein K01849 - 5.4.99.2 0.000000000000000000000009343 105.0
DPH3_k127_8995513_0 Required for the formation of a threonylcarbamoyl group on adenosine at position 37 (t(6)A37) in tRNAs that read codons beginning with adenine. Is involved in the transfer of the threonylcarbamoyl moiety of threonylcarbamoyl-AMP (TC-AMP) to the N6 group of A37, together with TsaE and TsaB. TsaD likely plays a direct catalytic role in this reaction K01409 GO:0000408,GO:0002949,GO:0005575,GO:0005622,GO:0005623,GO:0006139,GO:0006396,GO:0006399,GO:0006400,GO:0006725,GO:0006807,GO:0008033,GO:0008150,GO:0008152,GO:0009451,GO:0009987,GO:0010467,GO:0016070,GO:0032991,GO:0034470,GO:0034641,GO:0034660,GO:0043170,GO:0043412,GO:0044237,GO:0044238,GO:0044424,GO:0044464,GO:0046483,GO:0070525,GO:0071704,GO:0090304,GO:1901360 2.3.1.234 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000719 437.0
DPH3_k127_8995513_1 Catalyzes the condensation of pantoate with beta-alanine in an ATP-dependent reaction via a pantoyl-adenylate intermediate K01918 GO:0003674,GO:0003824,GO:0004592,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006082,GO:0006520,GO:0006573,GO:0006575,GO:0006732,GO:0006766,GO:0006767,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009081,GO:0009108,GO:0009110,GO:0009987,GO:0015939,GO:0015940,GO:0016053,GO:0016874,GO:0016879,GO:0016881,GO:0019752,GO:0032787,GO:0033317,GO:0034641,GO:0042364,GO:0042398,GO:0043436,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0044283,GO:0044424,GO:0044444,GO:0044464,GO:0046394,GO:0051186,GO:0051188,GO:0071704,GO:0072330,GO:1901564,GO:1901566,GO:1901576,GO:1901605 6.3.2.1 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007873 348.0
DPH3_k127_8995513_2 Catalyzes the cyclization of GTP to (8S)-3',8-cyclo-7,8- dihydroguanosine 5'-triphosphate K03639 GO:0003674,GO:0003824,GO:0006732,GO:0006777,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009108,GO:0009987,GO:0018130,GO:0019538,GO:0019637,GO:0019720,GO:0043170,GO:0043545,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0046483,GO:0051186,GO:0051188,GO:0051189,GO:0071704,GO:0090407,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576 4.1.99.22 0.000000000000000000000000000000000000000000000000000000000000000000000000000000001575 275.0
DPH3_k127_8995513_3 Specifically dimethylates two adjacent adenosines (A1518 and A1519) in the loop of a conserved hairpin near the 3'-end of 16S rRNA in the 30S particle. May play a critical role in biogenesis of 30S subunits K02528 GO:0000154,GO:0000179,GO:0001510,GO:0003674,GO:0003824,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006139,GO:0006364,GO:0006396,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0008168,GO:0008170,GO:0008173,GO:0008649,GO:0008757,GO:0009451,GO:0009987,GO:0010467,GO:0016070,GO:0016072,GO:0016433,GO:0016740,GO:0016741,GO:0022613,GO:0031167,GO:0032259,GO:0034470,GO:0034641,GO:0034660,GO:0042254,GO:0043170,GO:0043412,GO:0043414,GO:0044085,GO:0044237,GO:0044238,GO:0044260,GO:0044424,GO:0044464,GO:0046483,GO:0071704,GO:0071840,GO:0090304,GO:0140098,GO:0140102,GO:1901360 2.1.1.182 0.0000000000000000000000000000000000000000000000000000000000000000000000000000007288 273.0
DPH3_k127_8995513_4 Catalyzes the pyruvoyl-dependent decarboxylation of aspartate to produce beta-alanine K01579 - 4.1.1.11 0.00000000000000000000000000000000000000000000000894 174.0
DPH3_k127_9012010_0 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic K00058 - 1.1.1.399,1.1.1.95 2.694e-246 773.0
DPH3_k127_9012010_1 Belongs to the glycosyl hydrolase 57 family K22451 GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0044424,GO:0044464 2.4.1.25 0.000000000000000000000000000000000000000000000000000000000000000000000003836 260.0
DPH3_k127_9012010_2 AMP nucleosidase K01241 - 3.2.2.4 0.00000000000000000000000000007038 121.0
DPH3_k127_9017188_0 May play a key role in the regulation of the intracellular concentration of adenosylhomocysteine K01251 - 3.3.1.1 3.659e-228 711.0
DPH3_k127_9017188_1 Type III restriction enzyme, res subunit - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002041 600.0
DPH3_k127_9017188_2 AAA domain, putative AbiEii toxin, Type IV TA system K01990,K09695 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001625 411.0
DPH3_k127_9017188_3 ABC-2 type transporter K09694 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000046 359.0
DPH3_k127_9017188_4 MltA specific insert domain K08304 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005361 351.0
DPH3_k127_9017188_5 Belongs to the RimK family K05844,K14940 - 6.3.2.32 0.000000000000000000000000000000000000003729 155.0
DPH3_k127_9017188_6 cheY-homologous receiver domain - - - 0.000000000000000000000000000000000004191 142.0
DPH3_k127_9017188_7 response regulator - - - 0.0002385 49.0
DPH3_k127_9030678_0 Type VI secretion protein, EvpB/VC_A0108, tail sheath K11900 - - 2.659e-265 822.0
DPH3_k127_9030678_1 ImcF-related N-terminal domain K11891 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008298 478.0
DPH3_k127_9030678_2 ImpA, N-terminal, type VI secretion system K11902 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006474 395.0
DPH3_k127_9030678_3 Type VI secretion system, VipA, VC_A0107 or Hcp2 K11901 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000538 258.0
DPH3_k127_9030678_4 Protein of avirulence locus involved in temperature-dependent protein secretion K03217,K11898 - - 0.0000000000000000000000000000000000000000000003783 177.0
DPH3_k127_9030678_5 ImpA, N-terminal, type VI secretion system K11910 - - 0.0000000000000000000000000000000000000000000004791 176.0
DPH3_k127_9030678_6 ImcF-related N-terminal domain K11891 - - 0.0000000000003174 70.0
DPH3_k127_9044169_0 Belongs to the glycosyl hydrolase 13 family K01214 - 3.2.1.68 0.0 1145.0
DPH3_k127_9044169_1 Fructose-bisphosphate aldolase class-II K01624 - 4.1.2.13 1.348e-201 630.0
DPH3_k127_9063476_0 SMART PAS domain containing protein - - - 2.342e-234 733.0
DPH3_k127_9063476_1 Catalyzes the irreversible transfer of a propylamine group from the amino donor S-adenosylmethioninamine (decarboxy- AdoMet) to putrescine (1,4-diaminobutane) to yield spermidine - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003505 611.0
DPH3_k127_9063476_11 PFAM Type IV pilus assembly PilZ - - - 0.0000007887 56.0
DPH3_k127_9063476_2 PFAM 4Fe-4S ferredoxin, iron-sulfur binding domain protein K03388 - 1.8.7.3,1.8.98.4,1.8.98.5,1.8.98.6 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005578 500.0
DPH3_k127_9063476_4 NADH ubiquinone oxidoreductase, 20 Kd subunit K14128 - 1.8.98.5 0.000000000000000000000000000000000000000000000000000004068 196.0
DPH3_k127_9063476_5 PFAM methyl-viologen-reducing hydrogenase delta subunit K14127 - 1.8.98.5,1.8.98.6 0.0000000000000000000000000000000000001413 145.0
DPH3_k127_9063476_6 Protein of unknown function (DUF1847) - - - 0.0000000000000000000000000000000000008198 147.0
DPH3_k127_9063476_7 GDSL-like Lipase/Acylhydrolase family - - - 0.000000000000000000000000006029 128.0
DPH3_k127_9063476_8 Domain of unknown function (DUF4258) - - - 0.00000000000000000000001158 102.0
DPH3_k127_9063476_9 - - - - 0.0000000000000000000001897 97.0
DPH3_k127_9083692_0 PFAM Extracellular ligand-binding receptor - - - 0.000000000000000000000000000000000000000000000000000001721 198.0
DPH3_k127_9083692_1 Histidine kinase-like ATPase domain - - - 0.000000000000000000000000002988 115.0
DPH3_k127_9083692_2 transporter antisigma-factor antagonist STAS K04749,K06378 - - 0.000000000000000000000003211 106.0
DPH3_k127_915511_0 Belongs to the binding-protein-dependent transport system permease family K01998 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001308 537.0
DPH3_k127_915511_1 PFAM ABC transporter K01995 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009054 404.0
DPH3_k127_915511_2 ABC transporter related K01996 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002726 394.0
DPH3_k127_915511_3 PFAM malic K00027,K00029 - 1.1.1.38,1.1.1.40 0.000000000000000000000000000000000001236 140.0
DPH3_k127_915511_4 Belongs to the binding-protein-dependent transport system permease family K01997 - - 0.00000000000000000000003507 99.0
DPH3_k127_918468_0 Catalyzes the isomerization between 2-isopropylmalate and 3-isopropylmalate, via the formation of 2-isopropylmaleate K01703 - 4.2.1.33,4.2.1.35 4.881e-215 673.0
DPH3_k127_918468_1 PFAM isocitrate isopropylmalate dehydrogenase K00052 - 1.1.1.85 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006505 433.0
DPH3_k127_918468_2 Involved in the biosynthesis of branched-chain amino acids (BCAA). Catalyzes an alkyl-migration followed by a ketol- acid reduction of (S)-2-acetolactate (S2AL) to yield (R)-2,3- dihydroxy-isovalerate. In the isomerase reaction, S2AL is rearranged via a Mg-dependent methyl migration to produce 3- hydroxy-3-methyl-2-ketobutyrate (HMKB). In the reductase reaction, this 2-ketoacid undergoes a metal-dependent reduction by NADPH to yield (R)-2,3-dihydroxy-isovalerate K00053 - 1.1.1.86 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004029 361.0
DPH3_k127_918468_3 Belongs to the CDP-alcohol phosphatidyltransferase class-I family K17103 - 2.7.8.8 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001249 322.0
DPH3_k127_918468_4 Catalyzes the isomerization between 2-isopropylmalate and 3-isopropylmalate, via the formation of 2-isopropylmaleate K01704 - 4.2.1.33,4.2.1.35 0.00000000000000000000000000000000000000000000000000000000000000000000000009499 251.0
DPH3_k127_918468_5 Catalyzes the formation of phosphatidylethanolamine (PtdEtn) from phosphatidylserine (PtdSer) K01613 - 4.1.1.65 0.00000000000000000000000000000000000000000000000000000002745 203.0
DPH3_k127_9212466_0 transposase activity - - - 2.134e-194 618.0
DPH3_k127_9212466_1 - - - - 0.00000000000000000000000003239 111.0
DPH3_k127_9233497_0 NADH-ubiquinone oxidoreductase-F iron-sulfur binding region K00124,K00335,K05587,K18331 - 1.12.1.3,1.6.5.3 6.471e-288 896.0
DPH3_k127_9233497_1 PFAM Cysteine-rich - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000001383 281.0
DPH3_k127_9233497_2 PFAM UspA domain protein - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000007323 269.0
DPH3_k127_9233497_3 formate dehydrogenase (NAD+) activity K00123,K00336 - 1.17.1.9,1.6.5.3 0.000000000000000000000000000000000000000000000000000000000000000002207 232.0
DPH3_k127_9233497_4 PFAM Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase - - - 0.0000000000000000000000000000000000000000000000000000000000000004541 236.0
DPH3_k127_9233497_5 PFAM NADH dehydrogenase (ubiquinone) 24 kDa subunit K00334 - 1.6.5.3 0.000000000000000000000000000000000000000000000000000000000001197 216.0
DPH3_k127_9233497_6 Domain in cystathionine beta-synthase and other proteins. - - - 0.0000000000000000000000000000000000000000000000001003 183.0
DPH3_k127_9233497_7 PFAM response regulator receiver - - - 0.0000000000000000000000000000001395 134.0
DPH3_k127_9239427_1 Histone-like DNA-binding protein which is capable of wrapping DNA to stabilize it, and thus to prevent its denaturation under extreme environmental conditions K03530 - - 0.0000000000000005346 81.0
DPH3_k127_9239427_2 Putative MetA-pathway of phenol degradation - - - 0.0000005732 51.0
DPH3_k127_9242791_0 Proton pump that utilizes the energy of pyrophosphate hydrolysis as the driving force for proton movement across the membrane. Generates a proton motive force K15987 - 3.6.1.1 1.084e-298 921.0
DPH3_k127_9242791_1 PFAM Dynamin family - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005814 564.0
DPH3_k127_9242791_2 Endonuclease/Exonuclease/phosphatase family - - - 0.00000000000000000000000000000000000371 144.0
DPH3_k127_9244943_0 PFAM Membrane protein of - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000001511 267.0
DPH3_k127_9244943_1 DnaJ molecular chaperone homology domain K03686 - - 0.0000000000000000000000004136 113.0
DPH3_k127_9244943_2 Belongs to the UPF0173 family - - - 0.00000000000000000002426 93.0
DPH3_k127_9279497_0 Histidine kinase-like ATPases - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003048 438.0
DPH3_k127_9279497_1 PFAM ATP-binding region ATPase domain protein K02482,K10819 - 2.7.13.3 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008875 391.0
DPH3_k127_9279497_2 PFAM response regulator receiver - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000002011 265.0
DPH3_k127_9279497_3 Necessary for normal cell division and for the maintenance of normal septation K03978 - - 0.00000000000000000000000002375 111.0
DPH3_k127_9279497_4 Ribosomal protein L11 methyltransferase K02687 - - 0.0000000000000000000004027 104.0
DPH3_k127_9279497_5 AMP-binding enzyme - - - 0.000000000000000002704 88.0
DPH3_k127_9286849_0 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase - - - 0.0000000000000000000000000000000000000000000000000000000000008605 228.0
DPH3_k127_9286849_1 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) - - - 0.00000000000000000000001372 104.0
DPH3_k127_9295163_0 ABC transporter K06147,K11085 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008758 428.0
DPH3_k127_9295163_1 Psort location Cytoplasmic, score - - - 0.0000000000000000000000000000000000008841 147.0
DPH3_k127_9295163_2 Psort location Cytoplasmic, score - - - 0.000000000000000000000000000000000006329 145.0
DPH3_k127_9303713_0 PDZ DHR GLGF domain protein - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000007527 266.0
DPH3_k127_9303713_1 - - - - 0.00000000002269 66.0
DPH3_k127_9324495_0 PFAM extracellular solute-binding protein, family 5 K02035 - - 5.812e-271 849.0
DPH3_k127_9324495_1 PFAM binding-protein-dependent transport systems inner membrane component K02033 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001668 500.0
DPH3_k127_9324495_2 PFAM aldo keto reductase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006836 486.0
DPH3_k127_9324495_3 ABC-type dipeptide oligopeptide nickel transport systems, permease components K02034 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003136 390.0
DPH3_k127_9324495_4 TIGRFAM oligopeptide dipeptide ABC transporter, ATPase subunit K02031 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001198 355.0
DPH3_k127_9333898_0 Belongs to the peptidase S16 family K01338,K04076,K04770 - 3.4.21.53 0.0 1193.0
DPH3_k127_9333898_1 Sigma-54 interaction domain - - - 6.39e-221 693.0
DPH3_k127_9333898_2 lyase activity - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003235 419.0
DPH3_k127_9333898_3 M42 glutamyl aminopeptidase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006339 315.0
DPH3_k127_9333898_4 phosphorelay signal transduction system K03413,K07315,K13924 - 2.1.1.80,3.1.1.61,3.1.3.3 0.0000000000000000000000000000000502 130.0
DPH3_k127_9333898_5 Belongs to the small heat shock protein (HSP20) family - - - 0.000000000001045 74.0
DPH3_k127_9346788_0 PFAM phosphate transporter K03306 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002785 501.0
DPH3_k127_9346788_1 Type II IV secretion system protein K02454,K02652 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000041 488.0
DPH3_k127_9346788_2 Protein of unknown function DUF47 K07220 - - 0.0000000000000000000000000000001493 130.0
DPH3_k127_9346788_3 ABC transporter substrate binding protein - - - 0.00000000000006306 76.0
DPH3_k127_93546_0 PFAM ABC transporter related K02028,K10004 - 3.6.3.21 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004183 330.0
DPH3_k127_93546_1 ABC-type Mn2 Zn2 transport systems permease components K09816 GO:0005575,GO:0005623,GO:0005886,GO:0008150,GO:0010035,GO:0010038,GO:0010043,GO:0016020,GO:0042221,GO:0044464,GO:0050896,GO:0071944 - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000001461 278.0
DPH3_k127_93546_2 Beta-lactamase superfamily domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000003681 278.0
DPH3_k127_93546_3 Ferric uptake regulator family K03711 - - 0.000000000000000000000000000000000000000000001953 171.0
DPH3_k127_9389132_0 Catalyzes the reduction of hydroxylamine to form NH(3) and H(2)O K05601 - 1.7.99.1 2.276e-295 913.0
DPH3_k127_9389132_1 helix_turn_helix, cAMP Regulatory protein K01420,K21563 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000002524 278.0
DPH3_k127_9389132_2 Nitrite and sulphite reductase 4Fe-4S - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000002939 277.0
DPH3_k127_9389132_4 diguanylate cyclase - - - 0.000000000001792 70.0
DPH3_k127_9447803_0 PFAM Extracellular ligand-binding receptor K01999 - - 6.855e-198 622.0
DPH3_k127_9447803_1 Belongs to the binding-protein-dependent transport system permease family K01998 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007775 460.0
DPH3_k127_9447803_2 Belongs to the binding-protein-dependent transport system permease family K01997 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002758 433.0
DPH3_k127_9447803_3 PFAM ABC transporter K01995,K01998 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001333 332.0
DPH3_k127_9448606_0 Pyruvate kinase, barrel domain K00873 - 2.7.1.40 9.724e-250 777.0
DPH3_k127_9448606_1 Belongs to the bacterial glucokinase family K00845 - 2.7.1.2 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006606 406.0
DPH3_k127_9448606_2 Forms passive diffusion pores that allow small molecular weight hydrophilic materials across the outer membrane - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001376 350.0
DPH3_k127_9448606_3 Catalyzes the reversible conversion of 2- phosphoglycerate into phosphoenolpyruvate. It is essential for the degradation of carbohydrates via glycolysis K01689 - 4.2.1.11 0.000000000000000000000000000000000000000000000000000000000000000009922 227.0
DPH3_k127_9448606_4 PhoQ Sensor - - - 0.00000000000000000000000000001794 128.0
DPH3_k127_9457453_0 Carbamoyl-phosphate synthetase large chain, oligomerisation K01955 - 6.3.5.5 0.0 1838.0
DPH3_k127_9457453_1 PFAM Glycosyl transferase, group 1 - - - 2.629e-297 932.0
DPH3_k127_9457453_10 Transcription factor that acts by binding directly to the RNA polymerase (RNAP). Required for negative regulation of rRNA expression and positive regulation of several amino acid biosynthesis promoters K06204 - - 0.0000000000001388 76.0
DPH3_k127_9457453_11 Acetyltransferase (GNAT) domain - - - 0.000156 51.0
DPH3_k127_9457453_2 PFAM Acyl-CoA dehydrogenase K09456 - - 4.426e-288 895.0
DPH3_k127_9457453_3 SMART Phospholipid glycerol acyltransferase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004995 588.0
DPH3_k127_9457453_4 PFAM PhoH-like protein K07175 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006533 571.0
DPH3_k127_9457453_5 Methyltransferase domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002259 325.0
DPH3_k127_9457453_6 Belongs to the thiolase family K00632 - 2.3.1.16 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000003973 280.0
DPH3_k127_9457453_7 Phosphatidylserine decarboxylase K01613 - 4.1.1.65 0.00000000000000000000000000000000000000000000000000000000000000000000000000000001023 276.0
DPH3_k127_9457453_8 YsiA-like protein, C-terminal region K13770 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000992 249.0
DPH3_k127_9457453_9 PFAM Protein-tyrosine phosphatase, low molecular weight K03741 - 1.20.4.1 0.00000000000000000000000000000000000002777 145.0
DPH3_k127_9458025_0 Elongation factor Tu domain 2 K03833 - - 1.013e-286 898.0
DPH3_k127_9458025_1 Chemotaxis sensory transducer K03406 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001148 552.0
DPH3_k127_9458025_2 Signal transducing histidine kinase, homodimeric domain K03407 - 2.7.13.3 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000518 412.0
DPH3_k127_9458025_3 PFAM response regulator receiver K03413 - - 0.00000000000000000000000000000000000000000000000000007544 189.0
DPH3_k127_9458025_4 Cytochrome c554 and c-prime - - - 0.000000000000000000000000000000000000000000000000009655 185.0
DPH3_k127_9458025_5 lipolytic protein G-D-S-L family - - - 0.000000000000000000000000000000004873 132.0
DPH3_k127_9458025_6 antisigma factor binding K04749 - - 0.000000002296 62.0
DPH3_k127_9458025_7 Protein of unknown function (DUF1285) K09986 - - 0.000004553 55.0
DPH3_k127_9460089_0 PFAM Type II IV secretion system protein K02669 - - 3.486e-194 609.0
DPH3_k127_9460089_1 Type IV secretion-system coupling protein DNA-binding domain K02669 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001775 584.0
DPH3_k127_9460089_10 Calcineurin-like phosphoesterase K07313 - 3.1.3.16 0.0000000000002624 69.0
DPH3_k127_9460089_2 PFAM aminotransferase, class IV K00826 - 2.6.1.42 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005526 416.0
DPH3_k127_9460089_3 Catalyzes the ATP-dependent phosphorylation of thiamine- monophosphate (TMP) to form thiamine-pyrophosphate (TPP), the active form of vitamin B1 K00946 - 2.7.4.16 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006524 359.0
DPH3_k127_9460089_4 Phosphomethylpyrimidine kinase K00941,K14153,K21219 - 2.5.1.3,2.7.1.49,2.7.4.7 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004223 347.0
DPH3_k127_9460089_5 Catalyzes the phosphorylation of the hydroxyl group of 4-methyl-5-beta-hydroxyethylthiazole (THZ) K00878 - 2.7.1.50 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000006975 289.0
DPH3_k127_9460089_6 protein (ATP-grasp superfamily) K07159 - - 0.0000000000000000000000000000000000000000000000000000000000000000000001863 248.0
DPH3_k127_9460089_7 HD domain - - - 0.0000000000000000000000000000000000000000000000000000000000000001684 231.0
DPH3_k127_9460089_8 Condenses 4-methyl-5-(beta-hydroxyethyl)thiazole monophosphate (THZ-P) and 2-methyl-4-amino-5-hydroxymethyl pyrimidine pyrophosphate (HMP-PP) to form thiamine monophosphate (TMP) K00788 GO:0003674,GO:0003824,GO:0004789,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006725,GO:0006766,GO:0006767,GO:0006772,GO:0006790,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009110,GO:0009228,GO:0009987,GO:0016740,GO:0016765,GO:0017144,GO:0018130,GO:0019438,GO:0034641,GO:0042364,GO:0042723,GO:0042724,GO:0044237,GO:0044249,GO:0044271,GO:0044272,GO:0044281,GO:0044283,GO:0044424,GO:0044464,GO:0046483,GO:0071704,GO:0072527,GO:0072528,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576 2.5.1.3 0.0000000000000000000000000000000000000000000000000000000002762 213.0
DPH3_k127_9474870_0 Non-canonical ABC transporter that contains transmembrane domains (TMD), which form a pore in the inner membrane, and an ATP-binding domain (NBD), which is responsible for energy generation. Confers resistance against macrolides K02003,K05685 - - 4.986e-238 748.0
DPH3_k127_9474870_1 Efflux transporter, RND family, MFP subunit K02005 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000377 537.0
DPH3_k127_9474870_2 Glycosyltransferase family 9 (heptosyltransferase) K02843 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001877 421.0
DPH3_k127_9474870_3 PFAM glycosyl transferase family 9 K02841 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007607 363.0
DPH3_k127_9474870_4 Domain present in phytochromes and cGMP-specific phosphodiesterases. - - - 0.0000000000000000000000000000000000000000000001734 184.0
DPH3_k127_9506333_0 Citrate transporter - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002688 516.0
DPH3_k127_9506333_1 TIGRFAM 6-phosphogluconolactonase K01057 - 3.1.1.31 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001717 316.0
DPH3_k127_9506333_2 PFAM MscS Mechanosensitive ion channel K22044 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002095 305.0
DPH3_k127_9506333_3 Putative redox-active protein (C_GCAxxG_C_C) - - - 0.00000000000000000000000000000000000000000000000000000000000000000000009397 244.0
DPH3_k127_9506333_4 - - - - 0.00000000000000002949 83.0
DPH3_k127_9506333_5 Putative redox-active protein (C_GCAxxG_C_C) - - - 0.00000001974 58.0
DPH3_k127_950749_0 PFAM Pyridine nucleotide-disulphide oxidoreductase K03388 - 1.8.7.3,1.8.98.4,1.8.98.5,1.8.98.6 2.074e-289 923.0
DPH3_k127_950749_1 Tim44 K02117,K08678,K11646,K15539,K17835,K21636 - 1.1.98.6,1.4.1.24,3.6.3.14,3.6.3.15,4.1.1.35,4.1.99.20 0.0000000000000000000000000000004543 126.0
DPH3_k127_950749_2 FlhB HrpN YscU SpaS Family K04061 - - 0.000000000000000000000000204 109.0
DPH3_k127_950749_3 - - - - 0.00000000000002697 79.0
DPH3_k127_9518131_0 Catalyzes the methylthiolation of an aspartic acid residue of ribosomal protein S12 K14441 - 2.8.4.4 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001798 415.0
DPH3_k127_9518131_1 - - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000003248 299.0
DPH3_k127_9518131_2 Belongs to the FPP GGPP synthase family K02523,K13789 - 2.5.1.1,2.5.1.10,2.5.1.29,2.5.1.90 0.00000000000000000000008456 101.0
DPH3_k127_9518962_0 Osmosensitive K channel His kinase sensor K07646 - 2.7.13.3 7.108e-202 634.0
DPH3_k127_9518962_1 PFAM sigma-54 factor interaction domain-containing protein - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002441 497.0
DPH3_k127_9518962_2 Cytochrome c bacterial - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007019 396.0
DPH3_k127_9518962_3 Part of the high-affinity ATP-driven potassium transport (or Kdp) system, which catalyzes the hydrolysis of ATP coupled with the electrogenic transport of potassium into the cytoplasm. This subunit acts as a catalytic chaperone that increases the ATP- binding affinity of the ATP-hydrolyzing subunit KdpB by the formation of a transient KdpB KdpC ATP ternary complex K01548 - 3.6.3.12 0.0000000000000000000000000000000000000001007 153.0
DPH3_k127_9523067_0 it exhibits DNA-dependent ATPase activity and contains distinct active sites for ATP binding, DNA binding, and interaction with DnaC protein, primase, and other prepriming proteins K02314 - 3.6.4.12 5.604e-203 642.0
DPH3_k127_9523067_1 PFAM 2Fe-2S iron-sulfur cluster binding domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002335 587.0
DPH3_k127_9523067_10 binds to the 23S rRNA K02939 GO:0003674,GO:0003676,GO:0003723,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0006412,GO:0006518,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0015934,GO:0019538,GO:0022625,GO:0022626,GO:0032991,GO:0034641,GO:0034645,GO:0043043,GO:0043170,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:0071704,GO:0097159,GO:1901363,GO:1901564,GO:1901566,GO:1901576,GO:1990904 - 0.0000000000000000000000000000000000000000000000000000009163 196.0
DPH3_k127_9523067_11 4Fe-4S binding domain - - - 0.00000000000000000000000000000000000000000000000000002668 192.0
DPH3_k127_9523067_12 Binds together with S18 to 16S ribosomal RNA K02990 GO:0003674,GO:0003676,GO:0003723,GO:0003735,GO:0005198,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0015935,GO:0019843,GO:0022626,GO:0022627,GO:0032991,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:0070181,GO:0097159,GO:1901363,GO:1990904 - 0.000000000000000000000000000000000000000000001519 169.0
DPH3_k127_9523067_13 Binds as a heterodimer with protein S6 to the central domain of the 16S rRNA, where it helps stabilize the platform of the 30S subunit K02963 GO:0003674,GO:0003735,GO:0005198,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0006412,GO:0006518,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0015935,GO:0019538,GO:0022626,GO:0022627,GO:0032991,GO:0034641,GO:0034645,GO:0043043,GO:0043170,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:0071704,GO:1901564,GO:1901566,GO:1901576,GO:1990904 - 0.0000000000000000000000000000000000002457 141.0
DPH3_k127_9523067_14 Belongs to the UPF0109 family K06960 - - 0.00000000000000000000000000000004888 126.0
DPH3_k127_9523067_15 cell cycle K05589,K12065,K13052 - - 0.000000000000001175 83.0
DPH3_k127_9523067_17 TIGRFAM MJ0042 family finger-like protein - - - 0.000000000000791 78.0
DPH3_k127_9523067_18 GTPase that associates with the 50S ribosomal subunit and may have a role during protein synthesis or ribosome biogenesis K03665 - - 0.00000000007469 64.0
DPH3_k127_9523067_2 Catalyzes the activation of phenylacetic acid (PA) to phenylacetyl-CoA (PA-CoA) K01912 - 6.2.1.30 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004307 571.0
DPH3_k127_9523067_20 propanoyl-CoA C-acyltransferase activity - - - 0.00001123 50.0
DPH3_k127_9523067_3 Receptor family ligand binding region K01999 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002326 542.0
DPH3_k127_9523067_4 PFAM aldo keto reductase K07079 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004483 534.0
DPH3_k127_9523067_5 Branched-chain amino acid transport system / permease component K01998 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006393 506.0
DPH3_k127_9523067_6 transport system permease K01997 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002339 439.0
DPH3_k127_9523067_7 Branched-chain amino acid ATP-binding cassette transporter K01995 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001032 351.0
DPH3_k127_9523067_8 PFAM glycosyl transferase family 9 - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000001851 271.0
DPH3_k127_9523067_9 Predicted membrane protein (DUF2232) - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000005268 258.0
DPH3_k127_95415_0 DNA polymerase III alpha subunit K02337,K14162 - 2.7.7.7 0.0 1419.0
DPH3_k127_9546409_0 PFAM Enoyl-CoA hydratase isomerase K01782,K01825 - 1.1.1.35,4.2.1.17,5.1.2.3,5.3.3.8 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008693 584.0
DPH3_k127_9546409_1 response to heat - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001542 406.0
DPH3_k127_9546409_2 - - - - 0.000000000000000000000000000000000000000000000000000000000000000000000005946 253.0
DPH3_k127_9546409_3 - - - - 0.0000000000000000000000000000000000000000000000000000000000002134 219.0
DPH3_k127_9546409_4 ABC-2 family transporter protein K01992 - - 0.0000000000000000000000000000000000006565 141.0
DPH3_k127_9546409_5 mechanosensitive ion channel K05802 - - 0.00000000000000000000007111 114.0
DPH3_k127_9546944_0 PFAM MotA TolQ ExbB proton channel K03562 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000299 295.0
DPH3_k127_9546944_1 Sir2 family K12410 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000005156 288.0
DPH3_k127_9546944_2 Biopolymer transport protein ExbD/TolR K03560 - - 0.000000000000000000000000000000000000000000000000000001364 194.0
DPH3_k127_9546944_3 energy transducer activity K03646,K03832 - - 0.00000000000002775 84.0
DPH3_k127_9546944_4 Involved in the TonB-independent uptake of proteins K03641 GO:0003674,GO:0005215,GO:0006810,GO:0008150,GO:0019534,GO:0022857,GO:0051179,GO:0051234,GO:0055085,GO:1901998 - 0.0000000438 57.0
DPH3_k127_95534_0 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic K00058 - 1.1.1.399,1.1.1.95 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004233 550.0
DPH3_k127_95534_1 Involved in the biosynthesis of the central metabolite phospho-alpha-D-ribosyl-1-pyrophosphate (PRPP) via the transfer of pyrophosphoryl group from ATP to 1-hydroxyl of ribose-5-phosphate (Rib-5-P) K00948 - 2.7.6.1 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003835 377.0
DPH3_k127_95534_2 Catalyzes the phosphorylation of the position 2 hydroxy group of 4-diphosphocytidyl-2C-methyl-D-erythritol K00919 GO:0003674,GO:0003824,GO:0006793,GO:0006796,GO:0008150,GO:0008152,GO:0009987,GO:0016301,GO:0016310,GO:0016740,GO:0016772,GO:0016773,GO:0044237,GO:0050515 2.7.1.148 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000816 299.0
DPH3_k127_95534_3 The natural substrate for this enzyme may be peptidyl- tRNAs which drop off the ribosome during protein synthesis K01056 GO:0003674,GO:0003824,GO:0004045,GO:0016787,GO:0016788,GO:0052689,GO:0140098,GO:0140101 3.1.1.29 0.00000000000000000000000000000000000000000000000000000000000000001781 230.0
DPH3_k127_95534_4 diguanylate cyclase - - - 0.000000000000000000000000000000000000000000000000000000000000002242 230.0
DPH3_k127_95534_5 This is one of the proteins that binds to the 5S RNA in the ribosome where it forms part of the central protuberance K02897 - - 0.000000000000000000000000000000000000000000000000000000000000003263 222.0
DPH3_k127_95534_6 Transposase - - - 0.00000000000000000000000000000000000000000000000000000000004505 211.0
DPH3_k127_95534_7 Domain of unknown function (DUF1844) - - - 0.0000000000000000000000000000000000003966 144.0
DPH3_k127_95534_8 Transposase K07487 - - 0.000000000001033 71.0
DPH3_k127_95534_9 - - - - 0.00003522 46.0
DPH3_k127_9601274_0 Histidine Phosphotransfer domain K03407 - 2.7.13.3 1.807e-230 733.0
DPH3_k127_9601274_1 Domain of unknown function (DUF4388) K03412 - 3.1.1.61,3.5.1.44 0.000000000000000000000000000000000000000002148 160.0
DPH3_k127_9694996_0 PFAM Formylglycine-generating sulfatase enzyme - - - 3.12e-244 766.0
DPH3_k127_9694996_1 Adenylyl- / guanylyl cyclase, catalytic domain K01768 - 4.6.1.1 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003553 310.0
DPH3_k127_9694996_2 COG0823 Periplasmic component of the Tol biopolymer transport system - - - 0.000173 47.0
DPH3_k127_9702981_0 Catalyzes the NADPH-dependent reduction of L-glutamate 5-phosphate into L-glutamate 5-semialdehyde and phosphate. The product spontaneously undergoes cyclization to form 1-pyrroline-5- carboxylate K00147 GO:0003674,GO:0003824,GO:0004350,GO:0008150,GO:0008152,GO:0016491,GO:0016620,GO:0016903,GO:0055114 1.2.1.41 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001414 318.0
DPH3_k127_9702981_1 Catalyzes the reversible adenylation of nicotinate mononucleotide (NaMN) to nicotinic acid adenine dinucleotide (NaAD) K00969 GO:0000309,GO:0003674,GO:0003824,GO:0004515,GO:0006082,GO:0006139,GO:0006520,GO:0006531,GO:0006725,GO:0006732,GO:0006733,GO:0006753,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009066,GO:0009108,GO:0009117,GO:0009165,GO:0009435,GO:0009987,GO:0016740,GO:0016772,GO:0016779,GO:0018130,GO:0019355,GO:0019359,GO:0019362,GO:0019363,GO:0019438,GO:0019637,GO:0019674,GO:0019752,GO:0034627,GO:0034628,GO:0034641,GO:0034654,GO:0043436,GO:0043648,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0046483,GO:0046496,GO:0051186,GO:0051188,GO:0055086,GO:0070566,GO:0071704,GO:0072524,GO:0072525,GO:0090407,GO:1901293,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576,GO:1901605 2.7.7.18 0.000000000000000000000000000000000000000000000000000000000000000000000000001687 261.0
DPH3_k127_9741543_0 Part of a stress-induced multi-chaperone system, it is involved in the recovery of the cell from heat-induced damage, in cooperation with DnaK, DnaJ and GrpE K03695 - - 0.0 1112.0
DPH3_k127_9741543_1 HMGL-like - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000482 582.0
DPH3_k127_9741543_2 DnaJ molecular chaperone homology domain K05516 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000152 453.0
DPH3_k127_9741543_3 Carboxyl transferase domain K01969,K13778 - 6.4.1.4,6.4.1.5 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008369 348.0
DPH3_k127_9741543_4 PFAM chemotaxis sensory transducer K03406 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008219 367.0
DPH3_k127_9741543_6 MerR HTH family regulatory protein - - - 0.0000000000000000000000002845 110.0
DPH3_k127_9779387_0 ABC1 family K03688 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001251 457.0
DPH3_k127_9779387_1 - - - - 0.0000000000000000000000000000000000000000000002204 174.0
DPH3_k127_9801453_0 DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates K03043 GO:0000428,GO:0005575,GO:0005622,GO:0005623,GO:0030880,GO:0032991,GO:0044424,GO:0044464,GO:0061695,GO:1902494,GO:1990234 2.7.7.6 0.0 2277.0
DPH3_k127_9801453_1 DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates K03046 - 2.7.7.6 0.00000000000000000000000000000000000000000000000000000000000000000000000000000004546 268.0
DPH3_k127_9801453_2 Forms part of the ribosomal stalk which helps the ribosome interact with GTP-bound translation factors. Is thus essential for accurate translation K02935 - - 0.000000000000000000000000000003063 120.0
DPH3_k127_98135_0 Anthranilate synthase component I domain protein K01665 - 2.6.1.85 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001797 430.0
DPH3_k127_98135_1 flagellar motor switch protein FliM K02416 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000805 410.0
DPH3_k127_98135_2 PFAM MotA TolQ ExbB proton channel K02556 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002522 321.0
DPH3_k127_98135_3 TIGRFAM glutamine amidotransferase of anthranilate synthase K01658 - 4.1.3.27 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000413 289.0
DPH3_k127_98135_4 PFAM Aminotransferase, class IV K00826,K02619 - 2.6.1.42,4.1.3.38 0.00000000000000000000000000000000000000000000000000000000000000000000000000000004115 276.0
DPH3_k127_98135_5 PFAM surface presentation of antigens (SPOA) protein K02417 - - 0.00000000000000000000000000000000000000000025 161.0
DPH3_k127_98135_6 Controls the rotational direction of flagella during chemotaxis K02415 - - 0.00000000000000000000000000000001681 131.0
DPH3_k127_98135_7 PFAM Flagellar biosynthesis protein, FliO K02418 - - 0.000002733 55.0
DPH3_k127_9822661_0 ATP-dependent serine protease that mediates the selective degradation of mutant and abnormal proteins as well as certain short-lived regulatory proteins. Required for cellular homeostasis and for survival from DNA damage and developmental changes induced by stress. Degrades polypeptides processively to yield small peptide fragments that are 5 to 10 amino acids long. Binds to DNA in a double-stranded, site-specific manner K01338 - 3.4.21.53 0.0 1168.0
DPH3_k127_9822661_1 Acts as a processive, ATP-dependent zinc metallopeptidase for both cytoplasmic and membrane proteins. Plays a role in the quality control of integral membrane proteins K03798 - - 1.431e-197 624.0
DPH3_k127_9822661_2 Acts as a processive, ATP-dependent zinc metallopeptidase for both cytoplasmic and membrane proteins. Plays a role in the quality control of integral membrane proteins K03798 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000002655 266.0
DPH3_k127_9822661_3 Belongs to the ABC transporter superfamily K02031 - - 0.0000000000000000000000000000000000000000000000000000000212 202.0
DPH3_k127_9822661_4 PFAM ATP-binding region, ATPase domain protein - - - 0.000000000000000000000000000000000000000000000000974 184.0
DPH3_k127_9822661_5 Outer membrane efflux protein - - - 0.00000000000000000000001492 104.0
DPH3_k127_9822661_6 - - - - 0.0000000000003868 70.0
DPH3_k127_9827901_0 PFAM Enoyl-CoA hydratase isomerase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001731 342.0
DPH3_k127_9827901_1 GlcNAc-PI de-N-acetylase K01463 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000002697 299.0
DPH3_k127_9827901_2 Bacterial transcriptional repressor C-terminal K16137 - - 0.000000000000000000000000000000000000000000000000000000000000000002273 232.0
DPH3_k127_9827901_3 Glycosyl transferase 4-like domain K15521 - 2.4.1.250 0.00000000000000000000000000000000000000000000000000000000007161 214.0
DPH3_k127_9827901_4 PFAM response regulator receiver K07657,K07663,K07664 - - 0.000000000000000009096 85.0
DPH3_k127_9831395_0 Converts seryl-tRNA(Sec) to selenocysteinyl-tRNA(Sec) required for selenoprotein biosynthesis K01042 GO:0003674,GO:0003824,GO:0004125,GO:0006139,GO:0006399,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0016070,GO:0016740,GO:0016785,GO:0018130,GO:0019438,GO:0032774,GO:0034641,GO:0034654,GO:0034660,GO:0043170,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0046483,GO:0071704,GO:0090304,GO:0097056,GO:0140098,GO:0140101,GO:1901360,GO:1901362,GO:1901576 2.9.1.1 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001407 571.0
DPH3_k127_9831395_1 Couples transcription and DNA repair by recognizing RNA polymerase (RNAP) stalled at DNA lesions. Mediates ATP-dependent release of RNAP and its truncated transcript from the DNA, and recruitment of nucleotide excision repair machinery to the damaged site K03723 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000631 318.0
DPH3_k127_9831395_2 DnaJ molecular chaperone homology domain K05516 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000003021 268.0
DPH3_k127_9834698_0 probably responsible for the translocation of the substrate across the membrane K02037 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003842 471.0
DPH3_k127_9834698_1 TIGRFAM phosphate ABC transporter, inner membrane subunit PstA K02038 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002106 467.0
DPH3_k127_9834698_2 TIGRFAM phosphate binding protein K02040 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008536 404.0
DPH3_k127_9834698_3 Part of the ABC transporter complex PstSACB involved in phosphate import. Responsible for energy coupling to the transport system K02036 - 3.6.3.27 0.0000000000000000004333 94.0
DPH3_k127_9834698_4 lyase activity - - - 0.0000000001971 70.0
DPH3_k127_9850659_0 Sigma-54 interaction domain - - - 3.951e-219 693.0
DPH3_k127_9850659_1 FKBP-type peptidyl-prolyl cis-trans isomerase - - - 0.000000000000000000000000000000000000000000000000000000000000000189 231.0
DPH3_k127_9850659_2 Multicopper oxidase - - - 0.00000000000000000000000000000000001501 141.0
DPH3_k127_9850659_3 Sigma-54 interaction domain - - - 0.000000000000000000000000000002055 125.0
DPH3_k127_9850659_4 Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family K07798 - - 0.000000000000000000000004232 115.0
DPH3_k127_9857915_0 Zinc-binding dehydrogenase K00344 - 1.6.5.5 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001164 422.0
DPH3_k127_9857915_1 RadC-like JAB domain K03630 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000004161 291.0
DPH3_k127_9857915_2 MlaC protein K07323 - - 0.0000000000000000000000000000000000000000000000000000000000113 213.0
DPH3_k127_9857915_3 DoxX K15977 - - 0.00000000000000000000000000000000000000006275 156.0
DPH3_k127_9857915_4 ABC transporter K02013,K05776 - 3.6.3.34 0.0000000005776 61.0
DPH3_k127_9869495_0 PFAM Conjugal transfer protein TrbG VirB9 CagX K20532 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000004879 263.0
DPH3_k127_9869495_1 PFAM Conjugal transfer protein K20531 - - 0.00000000000000000000000000000000000000000000000000000000000000003006 230.0
DPH3_k127_9869495_2 TrbL/VirB6 plasmid conjugal transfer protein K07344 - - 0.0000000000000000000000000000000993 134.0
DPH3_k127_9872517_0 Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily K02015 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004599 469.0
DPH3_k127_9872517_1 General secretory system II protein E domain protein - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005086 461.0
DPH3_k127_9872517_10 His Kinase A (phosphoacceptor) domain - - - 0.0000000000000000000000000000000000000000000000000000000000000005639 235.0
DPH3_k127_9872517_11 response regulator K03413,K07688 - - 0.0000000000000000000000000000000001745 140.0
DPH3_k127_9872517_2 Catalyzes the methylation of C-1 in cobalt-precorrin-5B to form cobalt-precorrin-6A K02188 - 2.1.1.195 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003167 391.0
DPH3_k127_9872517_3 Tetrapyrrole (Corrin/Porphyrin) Methylases K03394 - 2.1.1.130,2.1.1.151 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001051 357.0
DPH3_k127_9872517_4 Converts cobyric acid to cobinamide by the addition of aminopropanol on the F carboxylic group K02227 - 6.3.1.10 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003744 341.0
DPH3_k127_9872517_5 PFAM periplasmic binding protein K02016 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001362 342.0
DPH3_k127_9872517_6 Metallo-beta-lactamase superfamily - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001188 313.0
DPH3_k127_9872517_7 PFAM ABC transporter K02013 - 3.6.3.34 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001611 321.0
DPH3_k127_9872517_8 twitching motility protein K02669 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000003447 299.0
DPH3_k127_9872517_9 Precorrin-8X methylmutase K06042 - 5.4.99.60,5.4.99.61 0.00000000000000000000000000000000000000000000000000000000000000000000000000000002374 275.0
DPH3_k127_9889207_0 Aldo/keto reductase family - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004121 483.0
DPH3_k127_9889207_1 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003355 441.0
DPH3_k127_9889207_2 Iron-sulfur cluster-binding domain - - - 0.000000000000000007751 87.0
DPH3_k127_9889207_3 PFAM Extracellular ligand-binding receptor K01999 - - 0.000005492 49.0
DPH3_k127_9899541_0 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase K11383 - 2.7.13.3 4.852e-228 722.0
DPH3_k127_9899541_1 PFAM response regulator receiver K11384 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000305 458.0
DPH3_k127_9913129_0 amino acids such as valine, to avoid such errors it has two additional distinct tRNA(Ile)-dependent editing activities. One activity is designated as 'pretransfer' editing and involves the hydrolysis of activated Val-AMP. The other activity is designated 'posttransfer' editing and involves deacylation of mischarged Val-tRNA(Ile) K01870 - 6.1.1.5 0.0 1416.0
DPH3_k127_9913129_1 In eubacteria ppGpp (guanosine 3'-diphosphate 5-' diphosphate) is a mediator of the stringent response that coordinates a variety of cellular activities in response to changes in nutritional abundance K00951,K01139 - 2.7.6.5,3.1.7.2 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001991 458.0
DPH3_k127_9913129_2 This protein specifically catalyzes the removal of signal peptides from prolipoproteins K03101 - 3.4.23.36 0.0000000000000000000000000000000000000000001952 164.0
DPH3_k127_9913129_3 Pilus assembly protein, PilP K02664,K02665 - - 0.00000006915 55.0
DPH3_k127_9913129_4 Belongs to the 'phage' integrase family - - - 0.0000007675 54.0
DPH3_k127_9913129_5 Belongs to the 'phage' integrase family - - - 0.00014 49.0
DPH3_k127_9915282_0 Prevents misfolding and promotes the refolding and proper assembly of unfolded polypeptides generated under stress conditions K04077 GO:0003674,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006457,GO:0006458,GO:0008150,GO:0009987,GO:0016465,GO:0032991,GO:0044183,GO:0044424,GO:0044444,GO:0044445,GO:0044464,GO:0051082,GO:0061077,GO:0101031,GO:1990220 - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000006165 284.0
DPH3_k127_9915282_1 BtpA family K06971 - - 0.000000000000000000000000000000000000000000000000000000000000000351 228.0
DPH3_k127_9915282_2 Cobalamin adenosyltransferase K00798 - 2.5.1.17 0.0000000000000000000000000000000000000000000000000000000000000003868 223.0
DPH3_k127_9915282_3 Binds to Cpn60 in the presence of Mg-ATP and suppresses the ATPase activity of the latter K04078 GO:0003674,GO:0005488,GO:0005515,GO:0006457,GO:0006458,GO:0006950,GO:0006986,GO:0008150,GO:0009987,GO:0010033,GO:0035966,GO:0042221,GO:0043167,GO:0043169,GO:0046872,GO:0050896,GO:0051082,GO:0051084,GO:0051085,GO:0051087,GO:0061077 - 0.00000000000000000000000000000000000003935 144.0
DPH3_k127_9925688_0 Domain of Unknown Function (DUF748) - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008805 415.0
DPH3_k127_9925688_1 Protein of unknown function (DUF3124) - - - 0.000000000000000000000000000000000000000000002702 166.0
DPH3_k127_9929495_0 Catalyzes the reduction of hydroxylamine to form NH(3) and H(2)O K05601 - 1.7.99.1 3.935e-296 914.0
DPH3_k127_9929495_1 Flavodoxin - - - 1.713e-200 638.0
DPH3_k127_9929495_2 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) - - - 0.0000000000000000000000000000000000000000000000239 174.0
DPH3_k127_9929495_3 electron transfer activity K05337 - - 0.0000000000000000000002858 98.0
DPH3_k127_9929495_4 PFAM CBS domain - - - 0.000005076 51.0
DPH3_k127_9967503_0 Belongs to the RtcB family K14415 - 6.5.1.3 3.764e-259 804.0
DPH3_k127_9967503_1 cobalamin synthesis protein, P47K - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005022 314.0
DPH3_k127_9967503_2 Archease protein family (MTH1598/TM1083) - - - 0.00000000000000000000000000000000000004483 147.0
DPH3_k127_9967503_3 Appr-1'-p processing enzyme - - - 0.0000000000000000000000000001804 115.0
DPH3_k127_9967503_5 PFAM Glycosyl transferase family 2 K00720 - 2.4.1.80 0.00004487 45.0
DPH3_k127_9970304_0 COG1104 Cysteine sulfinate desulfinase cysteine desulfurase K04487 - 2.8.1.7 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000509 345.0
DPH3_k127_9970304_1 NifU-like N terminal domain K04488 - - 0.00000000000000000000000000000000000000000000000000006717 192.0
DPH3_k127_9970304_2 Transcriptional regulator - - - 0.000000000000000000000000000000000000000004523 162.0
DPH3_k127_998294_0 Von Willebrand factor K07114 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007886 476.0
DPH3_k127_998294_1 membrane transporter protein K07090 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001067 398.0
DPH3_k127_998294_2 PFAM Acyltransferase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000307 319.0
DPH3_k127_998294_4 Planctomycete cytochrome C - - - 0.0000000000000000000000007309 109.0
DPH3_k127_998294_5 ubiE/COQ5 methyltransferase family - - - 0.000002408 53.0