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Overview

ID MAG00837
Name DYD1_bin.12
Sample SMP0025
Taxonomy
Kingdom Archaea
Phylum Thermoproteota
Class Nitrososphaeria
Order Nitrososphaerales
Family Nitrososphaeraceae
Genus Nitrososphaera
Species
Assembly information
Completeness (%) 90.1
Contamination (%) 0.37
GC content (%) 52.0
N50 (bp) 12,172
Genome size (bp) 1,557,979

Location

Module

Module ID Module name Total genes Total steps Contain genes Contain steps Percentage of genes Percentage of steps

Genes1619

Gene name Description KEGG GOs EC E-value Score Sequence
DYD1_k127_1063569_0 Glycosyltransferase family 28 C-terminal domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001388 497.0
DYD1_k127_1063569_1 metallopeptidase activity - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006493 483.0
DYD1_k127_1063569_12 Catalyzes the reduction of ribonucleotides to deoxyribonucleotides. May function to provide a pool of deoxyribonucleotide precursors for DNA repair during oxygen limitation and or for immediate growth after restoration of oxygen K00525 - 1.17.4.1 0.00000000009996 62.0
DYD1_k127_1063569_13 protein ubiquitination K10444,K10461,K13959 GO:0000151,GO:0000976,GO:0001067,GO:0002250,GO:0002253,GO:0002376,GO:0002429,GO:0002460,GO:0002467,GO:0002682,GO:0002684,GO:0002757,GO:0002764,GO:0002768,GO:0003674,GO:0003676,GO:0003677,GO:0003690,GO:0003700,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005634,GO:0005737,GO:0005911,GO:0005912,GO:0006355,GO:0006357,GO:0006464,GO:0006807,GO:0006955,GO:0006996,GO:0007010,GO:0007154,GO:0007165,GO:0007166,GO:0008150,GO:0008152,GO:0009653,GO:0009889,GO:0009891,GO:0009893,GO:0009987,GO:0010468,GO:0010556,GO:0010557,GO:0010604,GO:0010628,GO:0016043,GO:0016567,GO:0019219,GO:0019222,GO:0019538,GO:0023052,GO:0030054,GO:0030057,GO:0031323,GO:0031325,GO:0031326,GO:0031328,GO:0031461,GO:0031463,GO:0032446,GO:0032502,GO:0032991,GO:0036211,GO:0043170,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0043412,GO:0043565,GO:0044212,GO:0044237,GO:0044238,GO:0044260,GO:0044267,GO:0044424,GO:0044464,GO:0045103,GO:0045104,GO:0045109,GO:0045893,GO:0045935,GO:0048518,GO:0048522,GO:0048583,GO:0048584,GO:0048646,GO:0048856,GO:0050776,GO:0050778,GO:0050789,GO:0050794,GO:0050851,GO:0050853,GO:0050896,GO:0051171,GO:0051173,GO:0051252,GO:0051254,GO:0051716,GO:0051865,GO:0060255,GO:0065007,GO:0070161,GO:0070647,GO:0071704,GO:0071840,GO:0080090,GO:0097159,GO:0097435,GO:0140110,GO:1901363,GO:1901564,GO:1902494,GO:1902680,GO:1903506,GO:1903508,GO:1990234,GO:1990837,GO:2000112,GO:2001141 - 0.00002691 50.0
DYD1_k127_1063569_2 Periplasmic solute binding protein K09815 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001214 402.0
DYD1_k127_1063569_3 PFAM ABC transporter K09817 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005591 392.0
DYD1_k127_1063569_4 ABC 3 transport family K09816 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002569 374.0
DYD1_k127_1063569_5 Galactose oxidase, central domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008972 319.0
DYD1_k127_1063569_6 DNA-binding transcription factor activity - - - 0.000000000000000000000000000000000000000000000000000000000000003797 222.0
DYD1_k127_1063569_7 Ribbon-helix-helix protein, copG family K07722 - - 0.000000000000000000000000000000000000000000000000001604 184.0
DYD1_k127_1063569_8 response regulator, receiver - - - 0.000000000000000000004257 102.0
DYD1_k127_106898_0 Catalyzes the GTP-dependent ribosomal translocation step during translation elongation. During this step, the ribosome changes from the pre-translocational (PRE) to the post- translocational (POST) state as the newly formed A-site-bound peptidyl-tRNA and P-site-bound deacylated tRNA move to the P and E sites, respectively. Catalyzes the coordinated movement of the two tRNA molecules, the mRNA and conformational changes in the ribosome K03234 - - 0.0 1311.0
DYD1_k127_106898_1 Bacterial extracellular solute-binding proteins, family 5 Middle K02035 - - 0.0 1035.0
DYD1_k127_106898_10 Mg2 transporter protein K03284 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006991 484.0
DYD1_k127_106898_11 Catalyzes the conversion of cyclic dehypoxanthine futalosine (cyclic DHFL) into 1,4-dihydroxy-6-naphthoate, a step in the biosynthesis of menaquinone (MK, vitamin K2) K11785 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006198 410.0
DYD1_k127_106898_12 Oligopeptide/dipeptide transporter, C-terminal region K02032 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009902 404.0
DYD1_k127_106898_13 - - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009613 319.0
DYD1_k127_106898_14 Diphthamide synthase K06927 - 6.3.1.14 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004113 304.0
DYD1_k127_106898_15 Delta-aminolevulinic acid dehydratase K01698 - 4.2.1.24 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000001607 293.0
DYD1_k127_106898_16 - - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000003221 259.0
DYD1_k127_106898_17 PFAM Aldehyde dehydrogenase K00135 - 1.2.1.16,1.2.1.20,1.2.1.79 0.000000000000000000000000000000000000000000000000000000000000000000004968 238.0
DYD1_k127_106898_18 Functions by promoting the formation of the first peptide bond K03263 - - 0.000000000000000000000000000000000000000000000000000000000000000007658 226.0
DYD1_k127_106898_19 Responsible for synthesis of pseudouridine from uracil- 54 and uracil-55 in the psi GC loop of transfer RNAs K07583 - 5.4.99.25 0.00000000000000000000000000000000000000000000000000000000000000006854 235.0
DYD1_k127_106898_2 Involved in targeting and insertion of nascent membrane proteins into the cytoplasmic membrane. Binds to the hydrophobic signal sequence of the ribosome-nascent chain (RNC) as it emerges from the ribosomes. The SRP-RNC complex is then targeted to the cytoplasmic membrane where it interacts with the SRP receptor FtsY K03106 - 3.6.5.4 5.824e-249 773.0
DYD1_k127_106898_20 - - - - 0.000000000000000000000000000000000000000000000000000000000000005814 218.0
DYD1_k127_106898_21 Belongs to the eukaryotic ribosomal protein eS24 family K02974 - - 0.00000000000000000000000000000000000000000000000007491 180.0
DYD1_k127_106898_22 Protein conserved in bacteria - - - 0.000000000000000000000000000000000000000005686 171.0
DYD1_k127_106898_23 Belongs to the eukaryotic ribosomal protein eS31 family K02977 - - 0.000000000000000000000000000002326 122.0
DYD1_k127_106898_26 Glycosyl transferase family group 2 - - - 0.000000000003498 78.0
DYD1_k127_106898_27 PKD domain - - - 0.000007332 58.0
DYD1_k127_106898_28 response regulator, receiver - - - 0.0004736 42.0
DYD1_k127_106898_3 Radical SAM enzyme that catalyzes the cyclization of dehypoxanthine futalosine (DHFL) into cyclic dehypoxanthine futalosine (CDHFL), a step in the biosynthesis of menaquinone (MK, vitamin K2) - - - 1.827e-208 651.0
DYD1_k127_106898_4 Radical SAM K18285 - 2.5.1.120 6.076e-207 646.0
DYD1_k127_106898_5 Nucleotidyltransferase domain K07076 - - 6.652e-203 644.0
DYD1_k127_106898_6 CRISPR (clustered regularly interspaced short palindromic repeat), is an adaptive immune system that provides protection against mobile genetic elements (viruses, transposable elements and conjugative plasmids). CRISPR clusters contain spacers, sequences complementary to antecedent mobile elements, and target invading nucleic acids. CRISPR clusters are transcribed and processed into CRISPR RNA (crRNA). Acts as a dsDNA endonuclease. Involved in the integration of spacer DNA into the CRISPR cassette K15342 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008732 567.0
DYD1_k127_106898_7 inner membrane component K02033 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001981 554.0
DYD1_k127_106898_8 UbiD family K03182 - 4.1.1.98 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008523 511.0
DYD1_k127_106898_9 inner membrane component K02034 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001385 507.0
DYD1_k127_111920_0 TIGRFAM ABC transporter, substrate-binding protein, aliphatic sulfonates family K02051 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001323 512.0
DYD1_k127_111920_1 ABC-type nitrate sulfonate bicarbonate transport system, permease component K02050 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000016 398.0
DYD1_k127_111920_2 ABC-type nitrate sulfonate bicarbonate transport system, ATPase component K02049 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000003071 264.0
DYD1_k127_111920_3 PFAM (2R)-phospho-3-sulfolactate synthase ComA K08097 GO:0003674,GO:0003824,GO:0016829,GO:0016830,GO:0016831,GO:0050545 4.4.1.19 0.0000000000000000000000003541 104.0
DYD1_k127_123558_0 ribosomal protein L3 K02906 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001258 554.0
DYD1_k127_123558_1 Putative RNA methyltransferase K09142 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003403 434.0
DYD1_k127_123558_10 SAICAR synthetase K01923 - 6.3.2.6 0.000000000000000000000000000000000000000000000000000000000000000000000000000000001814 273.0
DYD1_k127_123558_11 The globular domain of the protein is located near the polypeptide exit tunnel on the outside of the subunit, while an extended beta-hairpin is found that lines the wall of the exit tunnel in the center of the 70S ribosome K02890 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000005813 274.0
DYD1_k127_123558_12 One of the primary rRNA binding proteins, it binds directly to 16S rRNA central domain where it helps coordinate assembly of the platform of the 30S subunit K02994 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000001111 248.0
DYD1_k127_123558_13 Protein S19 forms a complex with S13 that binds strongly to the 16S ribosomal RNA K02965 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000001165 248.0
DYD1_k127_123558_14 Helix-turn-helix domain - - - 0.000000000000000000000000000000000000000000000000000000000001273 215.0
DYD1_k127_123558_15 Domain of unknown function (DUF371) K09738 - - 0.00000000000000000000000000000000000000000000000000000000001022 210.0
DYD1_k127_123558_16 - - - - 0.0000000000000000000000000000000000000000000000000000000001038 205.0
DYD1_k127_123558_17 Located at the polypeptide exit tunnel on the outside of the subunit K02895 - - 0.000000000000000000000000000000000002666 141.0
DYD1_k127_123558_18 Binds to 23S rRNA. One of the proteins that surrounds the polypeptide exit tunnel on the outside of the ribosome K02892 - - 0.0000000000000000000000000000000001778 136.0
DYD1_k127_123558_19 One of the primary rRNA binding proteins, it binds specifically to the 5'-end of 16S ribosomal RNA K02961 - - 0.00000000000000000000000000000000131 132.0
DYD1_k127_123558_2 Proteasome endopeptidase complex K03432 - 3.4.25.1 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004009 429.0
DYD1_k127_123558_20 ribosomal protein S14 K02954 - - 0.00000000000000000000000000003975 116.0
DYD1_k127_123558_21 Part of ribonuclease P, a protein complex that generates mature tRNA molecules by cleaving their 5'-ends K03538 - 3.1.26.5 0.0000000000000000000000002594 108.0
DYD1_k127_123558_22 Belongs to the universal ribosomal protein uL29 family K02904 - - 0.00000000000000000001344 94.0
DYD1_k127_123558_3 Ribosomal protein L4 K02930 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007617 407.0
DYD1_k127_123558_4 Belongs to the eukaryotic ribosomal protein eS4 family K02987 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009286 361.0
DYD1_k127_123558_5 - - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001525 343.0
DYD1_k127_123558_6 Binds the lower part of the 30S subunit head K02982 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007631 336.0
DYD1_k127_123558_7 This protein binds to the 23S rRNA, and is important in its secondary structure. It is located near the subunit interface in the base of the L7 L12 stalk, and near the tRNA binding site of the peptidyltransferase center K02933 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000003076 294.0
DYD1_k127_123558_8 This is 1 of the proteins that binds and probably mediates the attachment of the 5S RNA into the large ribosomal subunit, where it forms part of the central protuberance. In the 70S ribosome it contacts protein S13 of the 30S subunit (bridge B1b), connecting the 2 subunits K02931 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000005257 278.0
DYD1_k127_123558_9 Binds to 23S rRNA. Forms part of two intersubunit bridges in the 70S ribosome K02874 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000009813 273.0
DYD1_k127_1251691_0 Is involved in the reduction of 2,3- digeranylgeranylglycerophospholipids (unsaturated archaeols) into 2,3-diphytanylglycerophospholipids (saturated archaeols) in the biosynthesis of archaeal membrane lipids. Catalyzes the formation of archaetidic acid (2,3-di-O-phytanyl-sn-glyceryl phosphate) from 2,3-di-O-geranylgeranylglyceryl phosphate (DGGGP) via the hydrogenation of each double bond of the isoprenoid chains - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002314 599.0
DYD1_k127_1251691_1 Belongs to the class-I aminoacyl-tRNA synthetase family K01869 - 6.1.1.4 0.000000000000000000000000000000000000000000000000000000003749 202.0
DYD1_k127_1287286_0 Catalyzes the attachment of alanine to tRNA(Ala) in a two-step reaction alanine is first activated by ATP to form Ala- AMP and then transferred to the acceptor end of tRNA(Ala). Also edits incorrectly charged Ser-tRNA(Ala) and Gly-tRNA(Ala) via its editing domain K01872 - 6.1.1.7 0.0 1460.0
DYD1_k127_1287286_1 helix_turn_helix ASNC type K03718 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000009633 279.0
DYD1_k127_1287286_2 Thioredoxin K03671 - - 0.0000000000000000000000000000000000000000000000000000000006501 203.0
DYD1_k127_1287286_3 Belongs to the class-I aminoacyl-tRNA synthetase family K01869 - 6.1.1.4 0.0000000000000000000000000000000000000000000000000003488 184.0
DYD1_k127_1289086_0 Catalyzes the ATP-dependent amidation of the two carboxylate groups at positions a and c of cobyrinate, using either L-glutamine or ammonia as the nitrogen source K02224 - 6.3.5.11,6.3.5.9 1.575e-224 702.0
DYD1_k127_1289086_1 Translation initiation factor 2, alpha subunit K03237 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006207 382.0
DYD1_k127_1289086_2 Cobalt chelatase (CbiK) K06042 - 5.4.99.60,5.4.99.61 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003007 342.0
DYD1_k127_1289086_3 ATP corrinoid adenosyltransferase K19221 - 2.5.1.17 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000004005 293.0
DYD1_k127_1289086_4 Cobalt chelatase (CbiK) K06042 - 5.4.99.60,5.4.99.61 0.00000000000000000000000000000000000000000000000000000000000000000000000004856 252.0
DYD1_k127_1368227_1 flavodoxin nitric oxide synthase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003734 413.0
DYD1_k127_1368227_2 Protein of unknown function (DUF1326) - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002463 316.0
DYD1_k127_1368227_3 Belongs to the Dps family K04047 - - 0.0000000000000000000000000000000000000000000000000168 184.0
DYD1_k127_1368227_4 - - - - 0.0005687 47.0
DYD1_k127_14140_0 Allows the formation of correctly charged Gln-tRNA(Gln) through the transamidation of misacylated Glu-tRNA(Gln) in organisms which lack glutaminyl-tRNA synthetase. The reaction takes place in the presence of glutamine and ATP through an activated gamma-phospho-Glu-tRNA(Gln). The GatDE system is specific for glutamate and does not act on aspartate K03330 - 6.3.5.7 2.745e-315 975.0
DYD1_k127_14140_1 Allows the formation of correctly charged Gln-tRNA(Gln) through the transamidation of misacylated Glu-tRNA(Gln) in organisms which lack glutaminyl-tRNA synthetase. The reaction takes place in the presence of glutamine and ATP through an activated gamma-phospho-Glu-tRNA(Gln). The GatDE system is specific for glutamate and does not act on aspartate K09482 - 6.3.5.7 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003364 597.0
DYD1_k127_14140_2 Catalyzes the conversion of 3'-phosphate to a 2',3'- cyclic phosphodiester at the end of RNA. The mechanism of action of the enzyme occurs in 3 steps (A) adenylation of the enzyme by ATP K01974 - 6.5.1.4 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004149 363.0
DYD1_k127_14140_5 Cytidylyltransferase-like K00952 - 2.7.7.1 0.0000000000000000000000000000000000000000000000000000000000000000000000000006731 258.0
DYD1_k127_1421377_0 Dienelactone hydrolase family - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000006634 274.0
DYD1_k127_1421377_1 PFAM blue (type 1) copper domain protein - - - 0.0000000000000000000000000000000000002261 145.0
DYD1_k127_1421377_2 Universal stress protein - - - 0.000000000000000000000000000000000001066 143.0
DYD1_k127_1421377_3 PFAM CBS domain containing protein - - - 0.000000000000007478 80.0
DYD1_k127_1421377_5 Domain of unknown function (DUF4342) - - - 0.00000000002096 68.0
DYD1_k127_1548022_0 Chorismate mutase type II K00812 - 2.6.1.1 0.0000000000000000000000000000000000000000000000000000000000000000000000000000001694 268.0
DYD1_k127_1548022_1 Prephenate dehydrogenase K04517 - 1.3.1.12 0.000000000000000000000000000000000000000000000000000000000000000000000000000002313 271.0
DYD1_k127_1578563_0 cation diffusion facilitator family transporter - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001751 416.0
DYD1_k127_1578563_1 Required for chromosome condensation and partitioning - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002972 359.0
DYD1_k127_1578563_10 FUN14 family - - - 0.00000000000000000000000000000000009536 136.0
DYD1_k127_1578563_11 - - - - 0.00000000000000000000001133 105.0
DYD1_k127_1578563_14 - - - - 0.00000006154 56.0
DYD1_k127_1578563_16 Transcriptional regulator - - - 0.00000436 52.0
DYD1_k127_1578563_2 PFAM regulatory protein TetR K03577,K18939 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000006967 296.0
DYD1_k127_1578563_3 DSBA-like thioredoxin domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000007389 261.0
DYD1_k127_1578563_5 peptidyl-prolyl cis-trans isomerase K03768 - 5.2.1.8 0.000000000000000000000000000000000000000000000000000000001389 204.0
DYD1_k127_1578563_6 RNase H K03469 - 3.1.26.4 0.00000000000000000000000000000000000000000000000001944 183.0
DYD1_k127_1578563_7 metal-dependent protease of the PAD1 JAB1 superfamily - - - 0.0000000000000000000000000000000000000000000002402 170.0
DYD1_k127_1578563_8 Transcriptional regulator - - - 0.000000000000000000000000000000000000000002008 157.0
DYD1_k127_1578563_9 - - - - 0.00000000000000000000000000000000000000008042 154.0
DYD1_k127_1588149_0 DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates K03041 - 2.7.7.6 0.0 2341.0
DYD1_k127_1588149_1 One of the primary rRNA binding proteins, it binds directly to 16S rRNA where it nucleates assembly of the head domain of the 30S subunit. Is located at the subunit interface close to the decoding center K02992 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002416 364.0
DYD1_k127_1588149_2 With S4 and S5 plays an important role in translational accuracy. Located at the interface of the 30S and 50S subunits K02950 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000023 271.0
DYD1_k127_1588149_3 Participates in transcription termination K02600 - - 0.0000000000000000000000000000000000000000000000000000000007728 205.0
DYD1_k127_1588149_4 DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates K13798 - 2.7.7.6 0.00000000000000000000001782 99.0
DYD1_k127_1588149_5 PFAM ribosomal protein L7Ae L30e S12e Gadd45 K02908 - - 0.000005069 52.0
DYD1_k127_1601059_0 Catalyzes the reversible conversion of 2- phosphoglycerate into phosphoenolpyruvate. It is essential for the degradation of carbohydrates via glycolysis K01689 - 4.2.1.11 1.36e-218 683.0
DYD1_k127_1601059_1 Belongs to the universal ribosomal protein uS2 family K02967 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003442 380.0
DYD1_k127_1601059_2 PFAM Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase K07709 - 2.7.13.3 0.0000000000000000000000000000000000000000000000000000000000000000002772 240.0
DYD1_k127_1601059_3 DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates K03058 - 2.7.7.6 0.00000000000000000000000000000000000000003643 152.0
DYD1_k127_1601059_4 - - - - 0.00000000001016 66.0
DYD1_k127_1660807_0 Is involved in the reduction of 2,3- digeranylgeranylglycerophospholipids (unsaturated archaeols) into 2,3-diphytanylglycerophospholipids (saturated archaeols) in the biosynthesis of archaeal membrane lipids. Catalyzes the formation of archaetidic acid (2,3-di-O-phytanyl-sn-glyceryl phosphate) from 2,3-di-O-geranylgeranylglyceryl phosphate (DGGGP) via the hydrogenation of each double bond of the isoprenoid chains K00313 - - 0.0 1004.0
DYD1_k127_1660807_1 Electron transfer flavoprotein domain K03522 - - 1.466e-205 648.0
DYD1_k127_1660807_2 Electron transfer flavoprotein domain K03521 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003538 473.0
DYD1_k127_1660807_3 damaged site, the DNA wraps around one UvrB monomer. DNA wrap is dependent on ATP binding by UvrB and probably causes local melting of the DNA helix, facilitating insertion of UvrB beta-hairpin between the DNA strands. Then UvrB probes one DNA strand for the presence of a lesion. If a lesion is found the UvrA subunits dissociate and the UvrB-DNA preincision complex is formed. This complex is subsequently bound by UvrC and the second UvrB is released. If no lesion is found, the DNA wraps around the other UvrB subunit that will check the other stand for damage K03702 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003191 348.0
DYD1_k127_1660807_4 Redoxin - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000154 326.0
DYD1_k127_1660807_5 HD domain K00951,K01139 - 2.7.6.5,3.1.7.2 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007377 307.0
DYD1_k127_1660807_6 Sulfotransferase family - - - 0.000000000414 71.0
DYD1_k127_1713884_0 Catalyzes the reduction of ribonucleotides to deoxyribonucleotides. May function to provide a pool of deoxyribonucleotide precursors for DNA repair during oxygen limitation and or for immediate growth after restoration of oxygen K00525 - 1.17.4.1 0.0 1548.0
DYD1_k127_1713884_1 Anaerobic ribonucleoside-triphosphate reductase K21636 - 1.1.98.6 1.315e-298 929.0
DYD1_k127_1713884_10 - - - - 0.00000000000000000000004217 99.0
DYD1_k127_1713884_2 Releases the supercoiling and torsional tension of DNA, which is introduced during the DNA replication and transcription, by transiently cleaving and rejoining one strand of the DNA duplex. Introduces a single-strand break via transesterification at a target site in duplex DNA. The scissile phosphodiester is attacked by the catalytic tyrosine of the enzyme, resulting in the formation of a DNA-(5'-phosphotyrosyl)-enzyme intermediate and the expulsion of a 3'-OH DNA strand. The free DNA strand then undergoes passage around the unbroken strand, thus removing DNA supercoils. Finally, in the religation step, the DNA 3'-OH attacks the covalent intermediate to expel the active-site tyrosine and restore the DNA phosphodiester backbone K03168 - 5.99.1.2 5.131e-292 911.0
DYD1_k127_1713884_3 Thiolase, N-terminal domain K00626 - 2.3.1.9 9.19e-238 737.0
DYD1_k127_1713884_4 Transposase, is605 orfb family K07496 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003436 446.0
DYD1_k127_1713884_5 Carbon-nitrogen hydrolase K11206 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004138 368.0
DYD1_k127_1713884_6 Nitroreductase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000003926 272.0
DYD1_k127_1713884_7 conserved protein implicated in secretion - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000001388 258.0
DYD1_k127_1713884_8 nucleic-acid-binding protein containing a Zn-ribbon K07068 - - 0.0000000000000000000000000000000000000000000000000000000004175 203.0
DYD1_k127_1757013_0 PFAM regulatory protein, ArsR - - - 1.601e-281 876.0
DYD1_k127_1757013_1 Glycosyl transferase family group 2 - - - 2.208e-224 707.0
DYD1_k127_1757013_2 - - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006181 304.0
DYD1_k127_1757013_3 - - - - 0.00000000000000000000000000000004175 127.0
DYD1_k127_1758068_0 Belongs to the class-I aminoacyl-tRNA synthetase family K01887 - 6.1.1.19 4.68e-274 857.0
DYD1_k127_1758068_1 Proton pump that utilizes the energy of pyrophosphate hydrolysis as the driving force for proton movement across the membrane. Generates a proton motive force K15987 - 3.6.1.1 3.219e-248 780.0
DYD1_k127_1758068_10 Uncharacterized ACR, COG1430 K09005 - - 0.0000000000000000000000000000000001664 138.0
DYD1_k127_1758068_11 - - - - 0.0000000000000000000000000003569 115.0
DYD1_k127_1758068_2 AAA domain (Cdc48 subfamily) - - - 1.498e-230 717.0
DYD1_k127_1758068_3 transcriptional - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008012 561.0
DYD1_k127_1758068_4 tRNA methyltransferase complex GCD14 subunit K07442 - 2.1.1.219,2.1.1.220 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006619 474.0
DYD1_k127_1758068_5 Phosphoglycolate phosphatase K22223 - 3.1.3.18 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004119 385.0
DYD1_k127_1758068_6 conserved protein implicated in secretion - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000164 292.0
DYD1_k127_1758068_8 - - - - 0.0000000000000000000000000000000000000000000000000003788 189.0
DYD1_k127_1759236_0 Heat shock 70 kDa protein K04043 - - 6.104e-239 744.0
DYD1_k127_1759236_1 DnaJ central domain K03686 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005377 586.0
DYD1_k127_1759236_2 Belongs to the small heat shock protein (HSP20) family K13993 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003078 317.0
DYD1_k127_1759236_3 DNA polymerase elongation subunit (Family B) K02319 - 2.7.7.7 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001056 320.0
DYD1_k127_1759236_4 Involved in DNA repair and in homologous recombination. Binds and assemble on single-stranded DNA to form a nucleoprotein filament. Hydrolyzes ATP in a ssDNA-dependent manner and promotes DNA strand exchange between homologous DNA molecules K04483 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005245 318.0
DYD1_k127_1759236_5 - - - - 0.00000000000000000000000000000021 124.0
DYD1_k127_1824915_0 cation diffusion facilitator family transporter - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008359 606.0
DYD1_k127_1824915_1 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase K00020 - 1.1.1.31 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005118 404.0
DYD1_k127_1824915_2 protein (ATP-grasp superfamily) K07159 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001115 379.0
DYD1_k127_1824915_3 Catalyzes the dehydration of the S-form of NAD(P)HX at the expense of ADP, which is converted to AMP. Together with NAD(P)HX epimerase, which catalyzes the epimerization of the S- and R-forms, the enzyme allows the repair of both epimers of NAD(P)HX, a damaged form of NAD(P)H that is a result of enzymatic or heat-dependent hydration K17758 - 4.2.1.136 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009447 374.0
DYD1_k127_1824915_4 Putative tRNA binding domain K06878 - - 0.00000000000000000000000000000000000000000001733 164.0
DYD1_k127_1824915_5 PFAM Radical SAM domain protein - - - 0.00000000000000000000000000000000001227 137.0
DYD1_k127_1824915_6 - - - - 0.00000000000000000000003026 108.0
DYD1_k127_1824915_7 response regulator, receiver K07668,K07669 - - 0.00000000000000000001075 96.0
DYD1_k127_1858184_0 exonuclease of the beta-lactamase fold involved in RNA processing K07577 - - 2.135e-244 758.0
DYD1_k127_1858184_1 PFAM tRNA synthetases class I (C) catalytic domain K01883 - 6.1.1.16 3.288e-240 748.0
DYD1_k127_1858184_2 Is required not only for elongation of protein synthesis but also for the initiation of all mRNA translation through initiator tRNA(fMet) aminoacylation K01874 - 6.1.1.10 2.963e-231 719.0
DYD1_k127_1858184_3 S-adenosyl-L-homocysteine hydrolase, NAD binding domain K01251 - 3.3.1.1 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001921 597.0
DYD1_k127_1858184_5 COG2146 Ferredoxin subunits of nitrite reductase and ring-hydroxylating dioxygenases K00363,K15762 - 1.7.1.15 0.00000000000000000000000000000000000000000000000000004205 187.0
DYD1_k127_1858184_6 Integral membrane protein CcmA involved in cell shape determination - - - 0.00000000000000000000000000000000000000001638 155.0
DYD1_k127_1883538_0 hydrolases or acyltransferases (alpha beta hydrolase superfamily) - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003118 411.0
DYD1_k127_1883538_1 8-oxoguanine DNA glycosylase K03660 - 4.2.99.18 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007835 394.0
DYD1_k127_1883538_2 Ribonuclease K03469 - 3.1.26.4 0.0000000000000000000000000000000000000000006594 162.0
DYD1_k127_1883538_3 COG2002 Regulators of stationary sporulation gene expression - - - 0.0000000000000000000000000000000000000009722 149.0
DYD1_k127_1883538_4 COG1653 ABC-type sugar transport system, periplasmic component K02027 - - 0.0000000000000000005704 96.0
DYD1_k127_1913431_0 phosphoglycerate mutase K15635 - 5.4.2.12 5.792e-214 670.0
DYD1_k127_1913431_1 factor TFIIB K03124 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003269 571.0
DYD1_k127_1913431_2 chromosome segregation and condensation protein ScpA K05896 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001346 351.0
DYD1_k127_1913431_3 segregation and condensation protein K06024 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000003354 294.0
DYD1_k127_1913431_4 Ribosomal protein S8e K02995 - - 0.000000000000000000000000000000000000000000000000000000002586 202.0
DYD1_k127_1913431_5 SRP19 protein K03105 - - 0.00000000000000000000000000000000000000000001337 163.0
DYD1_k127_1913431_7 RNA-binding protein involved in rRNA processing K07569 - - 0.000000000000000000000000000001501 123.0
DYD1_k127_1937668_0 UDP-N-acetylglucosamine 2-epimerase K01791 - 5.1.3.14 2.289e-259 804.0
DYD1_k127_1937668_1 Phosphomethylpyrimidine kinase K21219 - 2.5.1.3,2.7.1.49,2.7.4.7 8.279e-201 633.0
DYD1_k127_1937668_2 Galactose-1-phosphate uridyl transferase, N-terminal domain K00965 - 2.7.7.12 2.505e-199 623.0
DYD1_k127_1937668_3 nucleotidyltransferase activity - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000201 535.0
DYD1_k127_1937668_4 Nucleotidyl transferase K00966 - 2.7.7.13 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000405 409.0
DYD1_k127_1937668_5 - - - - 0.0000000000000000000000000000000000000000003343 162.0
DYD1_k127_1937668_7 phosphoglycerate mutase K15635 - 5.4.2.12 0.000002746 49.0
DYD1_k127_1965059_0 Asp/Glu/Hydantoin racemase K01776 - 5.1.1.3 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003295 454.0
DYD1_k127_1965059_1 Tetrapyrrole (Corrin/Porphyrin) Methylases K05936 - 2.1.1.133,2.1.1.271 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003898 448.0
DYD1_k127_1965059_10 - - - - 0.0000000000000000000000000000007551 123.0
DYD1_k127_1965059_12 - - - - 0.000000000000000001592 90.0
DYD1_k127_1965059_13 - - - - 0.00000000002128 65.0
DYD1_k127_1965059_15 COG1653 ABC-type sugar transport system, periplasmic component K02027 - - 0.00001161 55.0
DYD1_k127_1965059_2 Catalyzes the sequential condensation of isopentenyl diphosphate (IPP) with geranylgeranyl diphosphate (GGPP) to yield (2Z,6Z,10Z,14Z,18Z,22Z,26Z,30E,34E,38E)-undecaprenyl diphosphate (tritrans,heptacis-UPP). It is probably the precursor of glycosyl carrier lipids K15888 - 2.5.1.89 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008316 441.0
DYD1_k127_1965059_3 conserved protein implicated in secretion - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004378 330.0
DYD1_k127_1965059_5 Tetrapyrrole (Corrin/Porphyrin) Methylases K03394 - 2.1.1.130,2.1.1.151 0.0000000000000000000000000000000000000000000000000000000000000000000000005839 254.0
DYD1_k127_1965059_6 DnaJ-class molecular chaperone with C-terminal Zn finger domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000001242 235.0
DYD1_k127_1965059_7 - - - - 0.00000000000000000000000000000000000000000000000000000000004106 207.0
DYD1_k127_1965059_8 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily - - - 0.00000000000000000000000000000000000000000004763 165.0
DYD1_k127_1965059_9 Glyoxalase-like domain K01759 - 4.4.1.5 0.00000000000000000000000000000000000000339 151.0
DYD1_k127_1969642_0 Allows the formation of correctly charged Asn-tRNA(Asn) or Gln-tRNA(Gln) through the transamidation of misacylated Asp- tRNA(Asn) or Glu-tRNA(Gln) in organisms which lack either or both of asparaginyl-tRNA or glutaminyl-tRNA synthetases. The reaction takes place in the presence of glutamine and ATP through an activated phospho-Asp-tRNA(Asn) or phospho-Glu-tRNA(Gln) K02434 - 6.3.5.6,6.3.5.7 2.559e-233 726.0
DYD1_k127_2052058_0 AMP-binding enzyme C-terminal domain K01895 - 6.2.1.1 5.554e-318 978.0
DYD1_k127_2052058_1 Catalyzes the reductive methylation of 2'-deoxyuridine- 5'-monophosphate (dUMP) to 2'-deoxythymidine-5'-monophosphate (dTMP) while utilizing 5,10-methylenetetrahydrofolate (mTHF) as the methyl donor, and NADPH and FADH(2) as the reductant - - - 6.345e-269 837.0
DYD1_k127_2052058_2 - - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004618 333.0
DYD1_k127_2052058_3 Transcriptional regulator - - - 0.0000000000000003793 83.0
DYD1_k127_2061440_0 UbiD family decarboxylase - - - 4.973e-222 693.0
DYD1_k127_2061440_2 Copper resistance protein D - - - 0.000000000000000000000000000000000000000000000000000000000000000000014 237.0
DYD1_k127_2061440_4 Catalyzes the conversion of 3'-phosphate to a 2',3'- cyclic phosphodiester at the end of RNA. The mechanism of action of the enzyme occurs in 3 steps (A) adenylation of the enzyme by ATP K01974 - 6.5.1.4 0.000000000000000000000000000000000000000000000000001293 185.0
DYD1_k127_2061440_5 - - - - 0.000000000000000000000000000000000001593 146.0
DYD1_k127_2061440_6 - - - - 0.00000000000000000000000000000000004445 137.0
DYD1_k127_2061440_7 - - - - 0.00000000000000000000000001562 108.0
DYD1_k127_207157_0 COG0330 Membrane protease subunits stomatin prohibitin homologs - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007901 456.0
DYD1_k127_207157_1 LOR SDH bifunctional - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005663 336.0
DYD1_k127_207157_2 Belongs to the MsrB Met sulfoxide reductase family K07305 - 1.8.4.12 0.000000000000000000000000000000000000000000000000000000008944 199.0
DYD1_k127_2081606_0 N-methylhydantoinase A acetone carboxylase, beta subunit - - - 0.0 1212.0
DYD1_k127_2081606_1 Succinyl-CoA ligase like flavodoxin domain K18594 - - 0.0 1202.0
DYD1_k127_2081606_11 Sua5 YciO YrdC YwlC family K07566 - 2.7.7.87 0.00000000000000000000000000000000000000000000000000000000000000000000000006059 254.0
DYD1_k127_2081606_12 Poly(R)-hydroxyalkanoic acid synthase subunit (PHA_synth_III_E) - - - 0.0000000000000000000000000000000000000000000000000000000000000000000002185 243.0
DYD1_k127_2081606_13 Toprim domain - - - 0.000000000000000000000000000000000000000000000000000000000000004201 220.0
DYD1_k127_2081606_14 - - - - 0.00000000000000000000000000000000000000000000000000004739 188.0
DYD1_k127_2081606_15 THUMP domain K06963 - - 0.0000000000000000000000000000000000158 141.0
DYD1_k127_2081606_16 metallopeptidase activity - - - 0.0000000000000000000000000000000001782 141.0
DYD1_k127_2081606_17 ribosomal protein K02962 - - 0.000000000000000000000000008084 111.0
DYD1_k127_2081606_2 DNA primase K02316 - - 8.817e-206 646.0
DYD1_k127_2081606_3 TIGRFAM poly(R)-hydroxyalkanoic acid synthase, class III, PhaC subunit K03821 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003805 607.0
DYD1_k127_2081606_4 Transposase, is605 orfb family K07496 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000453 443.0
DYD1_k127_2081606_5 Domain of unknown function DUF120 K07732 - 2.7.1.161 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003426 397.0
DYD1_k127_2081606_6 TatD related DNase K03424 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004561 353.0
DYD1_k127_2081606_7 Cytidylyltransferase-like K00980,K14656 - 2.7.7.2,2.7.7.39 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006368 343.0
DYD1_k127_2081606_8 glutamine amidotransferase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002444 331.0
DYD1_k127_2081606_9 Kinase binding protein CGI-121 - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000705 273.0
DYD1_k127_2211343_0 ATP-grasp domain K01903 - 6.2.1.5 4.384e-199 624.0
DYD1_k127_2211343_1 PFAM Permease for cytosine purines, uracil, thiamine, allantoin K03457 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003996 601.0
DYD1_k127_2211343_2 Succinyl-CoA synthetase functions in the citric acid cycle (TCA), coupling the hydrolysis of succinyl-CoA to the synthesis of either ATP or GTP and thus represents the only step of substrate-level phosphorylation in the TCA. The alpha subunit of the enzyme binds the substrates coenzyme A and phosphate, while succinate binding and nucleotide specificity is provided by the beta subunit K01902 - 6.2.1.5 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000212 533.0
DYD1_k127_2211343_3 COG0530 Ca2 Na antiporter K07301 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001009 498.0
DYD1_k127_2211343_4 RNA methylase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006216 338.0
DYD1_k127_2211343_5 Universal stress protein - - - 0.0000000000000000000000000000000000000000000007399 169.0
DYD1_k127_2211343_6 Belongs to the UPF0147 family K09721 - - 0.000000000000000000000000000000009114 128.0
DYD1_k127_2211716_0 - - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000003698 258.0
DYD1_k127_2211716_1 - - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000001569 253.0
DYD1_k127_2211716_2 Protein of unknown function (DUF541) K09807 - - 0.0000000000000000000000000000000000000000000000009379 183.0
DYD1_k127_2211716_3 Putative zinc- or iron-chelating domain K06940 - - 0.000000000000000000000000000000000000000000001462 168.0
DYD1_k127_2211716_4 Winged helix-turn-helix - - - 0.0000000000000000000000000000000001096 136.0
DYD1_k127_2211716_5 endonuclease K00986 - 2.7.7.49 0.00000000000000000000000000000000475 132.0
DYD1_k127_2211716_7 integrase family - - - 0.000009598 49.0
DYD1_k127_2257695_0 Catalyzes the ATP- and formate-dependent formylation of 5-aminoimidazole-4-carboxamide-1-beta-d-ribofuranosyl 5'- monophosphate (AICAR) to 5-formaminoimidazole-4-carboxamide-1- beta-d-ribofuranosyl 5'-monophosphate (FAICAR) in the absence of folates K06863 - 6.3.4.23 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005829 598.0
DYD1_k127_2257695_1 - - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008646 566.0
DYD1_k127_2257695_2 Catalyzes the attachment of alanine to tRNA(Ala) in a two-step reaction alanine is first activated by ATP to form Ala- AMP and then transferred to the acceptor end of tRNA(Ala). Also edits incorrectly charged Ser-tRNA(Ala) and Gly-tRNA(Ala) via its editing domain K01872 - 6.1.1.7 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001769 370.0
DYD1_k127_2257695_4 - - - - 0.00000003873 55.0
DYD1_k127_2326711_0 Phosphoenolpyruvate phosphomutase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000289 459.0
DYD1_k127_2326711_1 AMMECR1 K09141 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000972 282.0
DYD1_k127_2326711_2 COG0346 Lactoylglutathione lyase and related lyases - - - 0.00000000000000000000000000000000000000000000003164 173.0
DYD1_k127_2326711_4 Bacterial PH domain - - - 0.000001175 55.0
DYD1_k127_2327542_0 Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family K01845 - 5.4.3.8 1.703e-237 740.0
DYD1_k127_2327542_1 MiaB-like tRNA modifying enzyme K15865 - 2.8.4.5 2.397e-203 641.0
DYD1_k127_2327542_10 - - - - 0.0000000000000000001066 89.0
DYD1_k127_2327542_11 COG NOG14600 non supervised orthologous group - - - 0.0000000000000000005031 94.0
DYD1_k127_2327542_12 - - - - 0.000000000000000002048 86.0
DYD1_k127_2327542_2 DHHA1 domain K07463 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006903 502.0
DYD1_k127_2327542_3 Tubulin/FtsZ family, GTPase domain K03531 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001465 395.0
DYD1_k127_2327542_4 YjgF/chorismate_mutase-like, putative endoribonuclease - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000001596 252.0
DYD1_k127_2327542_5 Belongs to the ribosomal protein L31e family K02910 - - 0.0000000000000000000000000000000000000000000002515 170.0
DYD1_k127_2327542_6 - - - - 0.0000000000000000000000000000001503 126.0
DYD1_k127_2327542_8 Flavin reductase like domain - - - 0.0000000000000000000000003232 116.0
DYD1_k127_2327542_9 Belongs to the eukaryotic ribosomal protein eL39 family K02924 - - 0.0000000000000000000008921 96.0
DYD1_k127_2337704_0 Isocitrate isopropylmalate dehydrogenase K00031 - 1.1.1.42 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001475 595.0
DYD1_k127_2337704_1 Calcineurin-like phosphoesterase superfamily domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001938 422.0
DYD1_k127_2337704_2 Protein of unknown function (DUF655) K07572 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003039 335.0
DYD1_k127_2337704_3 Involved in DNA repair and in homologous recombination. Binds and assemble on single-stranded DNA to form a nucleoprotein filament. Hydrolyzes ATP in a ssDNA-dependent manner and promotes DNA strand exchange between homologous DNA molecules K04483 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002883 314.0
DYD1_k127_2337704_4 Belongs to the class I-like SAM-binding methyltransferase superfamily. rRNA adenine N(6)-methyltransferase family K02528 - 2.1.1.182 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000004962 293.0
DYD1_k127_2337704_5 - - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000001644 252.0
DYD1_k127_2337704_6 Methyltransferase small domain K02493 - 2.1.1.297 0.0000000000000000000000000000000000000000000000000000000006163 205.0
DYD1_k127_2337704_7 Belongs to the eukaryotic ribosomal protein eL21 family K02889 - - 0.0000000000000000000000000000000000000000000004327 168.0
DYD1_k127_2337704_8 RNA polymerase Rpb4 K03051 - 2.7.7.6 0.00000000000000000000000000000000000000000009351 165.0
DYD1_k127_2358693_0 MiaB-like tRNA modifying enzyme K15865 - 2.8.4.5 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004127 303.0
DYD1_k127_2358693_3 F5/8 type C domain - - - 0.00000005868 58.0
DYD1_k127_2370602_0 Transketolase, thiamine diphosphate binding domain K00615 - 2.2.1.1 2.261e-313 965.0
DYD1_k127_2370602_1 Presumably involved in the processing and regular turnover of intracellular proteins. Catalyzes the removal of unsubstituted N-terminal amino acids from various peptides K01255 - 3.4.11.1 4.176e-265 822.0
DYD1_k127_2370602_10 Transketolase, central region K00615 - 2.2.1.1 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002273 333.0
DYD1_k127_2370602_11 FR47-like protein K03789 - 2.3.1.128 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003804 299.0
DYD1_k127_2370602_12 Catalyzes the transfer of a ribosyl phosphate group from 5-phosphoribose 1-diphosphate to orotate, leading to the formation of orotidine monophosphate (OMP) K00762 - 2.4.2.10 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000001438 296.0
DYD1_k127_2370602_13 Transaldolase is important for the balance of metabolites in the pentose-phosphate pathway K00616 - 2.2.1.2 0.000000000000000000000000000000000000000000000000000000000000000000000000000001827 267.0
DYD1_k127_2370602_14 Endonuclease that specifically degrades the RNA of RNA- DNA hybrids K03470 - 3.1.26.4 0.00000000000000000000000000000000000000000000000000000000000000000000000000001418 267.0
DYD1_k127_2370602_15 Uncharacterised protein family UPF0047 - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000003124 257.0
DYD1_k127_2370602_17 Signal peptidase K13280 - 3.4.21.89 0.000000000000000000000000000000000000000000000000000000000000000000002764 239.0
DYD1_k127_2370602_18 Involved in pre-rRNA and tRNA processing. Utilizes the methyl donor S-adenosyl-L-methionine to catalyze the site-specific 2'-hydroxyl methylation of ribose moieties in rRNA and tRNA. Site specificity is provided by a guide RNA that base pairs with the substrate. Methylation occurs at a characteristic distance from the sequence involved in base pairing with the guide RNA K04795 GO:0000154,GO:0000494,GO:0001510,GO:0003674,GO:0003676,GO:0003723,GO:0003824,GO:0005488,GO:0006139,GO:0006325,GO:0006364,GO:0006396,GO:0006464,GO:0006479,GO:0006725,GO:0006807,GO:0006996,GO:0008150,GO:0008152,GO:0008168,GO:0008170,GO:0008173,GO:0008213,GO:0008276,GO:0008649,GO:0008757,GO:0009451,GO:0009987,GO:0010467,GO:0016043,GO:0016070,GO:0016072,GO:0016074,GO:0016569,GO:0016570,GO:0016571,GO:0016740,GO:0016741,GO:0018364,GO:0019538,GO:0022613,GO:0031123,GO:0031126,GO:0031167,GO:0032259,GO:0033967,GO:0034470,GO:0034641,GO:0034660,GO:0034963,GO:0036009,GO:0036211,GO:0042054,GO:0042254,GO:0043144,GO:0043170,GO:0043412,GO:0043414,GO:0043628,GO:0044085,GO:0044237,GO:0044238,GO:0044260,GO:0044267,GO:0046483,GO:0051276,GO:0071704,GO:0071840,GO:0090304,GO:0097159,GO:0140096,GO:0140098,GO:0140102,GO:1901360,GO:1901363,GO:1901564,GO:1990258,GO:1990259 - 0.00000000000000000000000000000000000000000000000000000000000000000004624 238.0
DYD1_k127_2370602_19 - - - - 0.000000000000000000000000000000000000000000000000000000000000000002616 228.0
DYD1_k127_2370602_2 RNase L inhibitor, RLI K06174 - - 2.634e-261 816.0
DYD1_k127_2370602_20 - - - - 0.0000000000000000000000000000000000781 135.0
DYD1_k127_2370602_3 NOSIC (NUC001) domain K14564 - - 5.473e-208 653.0
DYD1_k127_2370602_4 von Willebrand factor (vWF) type A domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009145 569.0
DYD1_k127_2370602_5 Peptidase family M50 - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004701 462.0
DYD1_k127_2370602_6 Belongs to the class I-like SAM-binding methyltransferase superfamily. Trm1 family K00555 - 2.1.1.215,2.1.1.216 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000163 438.0
DYD1_k127_2370602_7 Domain of unknown function (DUF2088) - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000853 424.0
DYD1_k127_2370602_8 Met-10+ like-protein K15429 - 2.1.1.228 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003297 400.0
DYD1_k127_2370602_9 General factor that plays a role in the activation of archaeal genes transcribed by RNA polymerase. Binds specifically to the TATA box promoter element which lies close to the position of transcription initiation K03120 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001328 364.0
DYD1_k127_2401219_0 Belongs to the Pirin family K06911 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000774 342.0
DYD1_k127_2401219_1 mechanosensitive ion channel - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000001294 298.0
DYD1_k127_2401219_2 Cytidylyltransferase-like K00952 - 2.7.7.1 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000003869 278.0
DYD1_k127_2401219_3 Is required not only for elongation of protein synthesis but also for the initiation of all mRNA translation through initiator tRNA(fMet) aminoacylation K01874 - 6.1.1.10 0.00000000000000000000000000000000000000000000000000000000000000000000000000001762 263.0
DYD1_k127_2401219_4 NAD(P)H-dependent FMN reductase K00299 - 1.5.1.38 0.00000000000000000000000000003961 118.0
DYD1_k127_2402238_0 Succinyl-CoA ligase like flavodoxin domain K18593 - - 0.0 1247.0
DYD1_k127_2402238_1 Peptidase dimerisation domain - - - 2.29e-235 734.0
DYD1_k127_2402238_2 COG1249 Pyruvate 2-oxoglutarate dehydrogenase complex, dihydrolipoamide dehydrogenase (E3) component, and related enzymes K00382 - 1.8.1.4 3.261e-194 614.0
DYD1_k127_2402238_3 ABC-type multidrug transport system, ATPase component K01990 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005717 499.0
DYD1_k127_2402238_4 COG1599 Single-stranded DNA-binding replication protein A (RPA), large (70 kD) subunit and related ssDNA-binding proteins K07466 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002571 488.0
DYD1_k127_2402238_5 ABC-2 type transporter K01992 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000367 387.0
DYD1_k127_2402238_6 Zinc finger domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001469 309.0
DYD1_k127_2437742_0 COG1522 Transcriptional regulators - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000029 576.0
DYD1_k127_2437742_1 Aldo/keto reductase family - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002393 559.0
DYD1_k127_2437742_10 RNA-binding protein contains TRAM domain - - - 0.000000000000000000000000000004979 121.0
DYD1_k127_2437742_11 COG3631 Ketosteroid isomerase-related protein - - - 0.0000000000000004638 84.0
DYD1_k127_2437742_12 transcriptional - GO:0000976,GO:0001067,GO:0001130,GO:0001217,GO:0003674,GO:0003676,GO:0003677,GO:0003690,GO:0003700,GO:0005488,GO:0005575,GO:0006355,GO:0008150,GO:0009889,GO:0009890,GO:0009892,GO:0010468,GO:0010556,GO:0010558,GO:0010605,GO:0010629,GO:0019219,GO:0019222,GO:0031323,GO:0031324,GO:0031326,GO:0031327,GO:0032991,GO:0032993,GO:0043565,GO:0044212,GO:0045892,GO:0045934,GO:0048519,GO:0048523,GO:0050789,GO:0050794,GO:0051171,GO:0051172,GO:0051252,GO:0051253,GO:0060255,GO:0065007,GO:0080090,GO:0097159,GO:0140110,GO:1901363,GO:1902679,GO:1903506,GO:1903507,GO:1990837,GO:2000112,GO:2000113,GO:2001141 - 0.0000000000001346 75.0
DYD1_k127_2437742_14 - - - - 0.0005817 44.0
DYD1_k127_2437742_2 Chlorite dismutase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001176 387.0
DYD1_k127_2437742_3 Belongs to the PdaD family K02626 - 4.1.1.19 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001058 322.0
DYD1_k127_2437742_4 PFAM TCP-1 cpn60 chaperonin family K22447 GO:0003674,GO:0005488,GO:0005515,GO:0006457,GO:0006458,GO:0008150,GO:0009987,GO:0044183,GO:0051082,GO:0061077 - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000001063 284.0
DYD1_k127_2437742_5 Domain of unknown function (DUF1802) - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000006684 276.0
DYD1_k127_2437742_7 Hemerythrin HHE cation binding domain - - - 0.00000000000000000000000000000000000000002542 159.0
DYD1_k127_2437742_8 - - - - 0.0000000000000000000000000000000000003485 144.0
DYD1_k127_2437742_9 FeS assembly ATPase SufC K09013 - - 0.0000000000000000000000000000000000006455 139.0
DYD1_k127_2466645_0 DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates K13798 - 2.7.7.6 0.0 2127.0
DYD1_k127_2466645_1 PFAM TCP-1 cpn60 chaperonin family K22447 GO:0003674,GO:0005488,GO:0005515,GO:0006457,GO:0006458,GO:0008150,GO:0009987,GO:0044183,GO:0051082,GO:0061077 - 8.005e-268 833.0
DYD1_k127_2466645_10 GTP cyclohydrolase I K01495 - 3.5.4.16 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000824 316.0
DYD1_k127_2466645_11 Mn2 -dependent serine threonine protein kinase K08851 - 2.7.11.1 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000006728 290.0
DYD1_k127_2466645_12 Belongs to the HAM1 NTPase family K02428 - 3.6.1.66 0.000000000000000000000000000000000000000000000000000000000000000000000000000000003354 273.0
DYD1_k127_2466645_13 protein secretion by the type IV secretion system - - - 0.00000000000000000000000000000000000000000000000000000000004709 214.0
DYD1_k127_2466645_14 Cupin superfamily (DUF985) K09705 - - 0.0000000000000000000000000000000000000000000000000002424 189.0
DYD1_k127_2466645_15 DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates K03053 - 2.7.7.6 0.0000000000000000000000000000000000000001147 151.0
DYD1_k127_2466645_16 PAC2 family K06869 - - 0.0000000000000000000000000000000000000177 154.0
DYD1_k127_2466645_17 Catalyzes the ATP-dependent conversion of 7-carboxy-7- deazaguanine (CDG) to 7-cyano-7-deazaguanine (preQ(0)) K06920 - 6.3.4.20 0.000000000000000000000003141 113.0
DYD1_k127_2466645_18 - - - - 0.0000000000000000000208 94.0
DYD1_k127_2466645_2 Pyridoxal-phosphate dependent enzyme K01738 - 2.5.1.47 7.57e-267 830.0
DYD1_k127_2466645_3 GTPase of unknown function C-terminal K06942 - - 1.351e-223 697.0
DYD1_k127_2466645_4 Component of the wyosine derivatives biosynthesis pathway that catalyzes the condensation of N-methylguanine with 2 carbon atoms from pyruvate to form the tricyclic 4-demethylwyosine (imG-14) on guanosine-37 of tRNA(Phe) K15449 - 4.1.3.44 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004907 587.0
DYD1_k127_2466645_5 Required for the formation of a threonylcarbamoyl group on adenosine at position 37 (t(6)A37) in tRNAs that read codons beginning with adenine. Is probably involved in the transfer of the threonylcarbamoyl moiety of threonylcarbamoyl-AMP (TC-AMP) to the N6 group of A37 K01409 - 2.3.1.234 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002481 539.0
DYD1_k127_2466645_6 NGG1p interacting factor 3 - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001932 451.0
DYD1_k127_2466645_7 protein with SCP PR1 domains - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001676 386.0
DYD1_k127_2466645_8 Catalyzes the complex heterocyclic radical-mediated conversion of 6-carboxy-5,6,7,8-tetrahydropterin (CPH4) to 7- carboxy-7-deazaguanine (CDG), a step common to the biosynthetic pathways of all 7-deazapurine-containing compounds K10026 - 4.3.99.3 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000737 377.0
DYD1_k127_2466645_9 PFAM RNA-metabolising metallo-beta-lactamase K12574 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002752 364.0
DYD1_k127_2496638_0 DEAD/H associated K03724 - - 0.0 1489.0
DYD1_k127_2496638_1 COG1599 Single-stranded DNA-binding replication protein A (RPA), large (70 kD) subunit and related ssDNA-binding proteins K07466 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009786 328.0
DYD1_k127_2496638_2 Belongs to the short-chain dehydrogenases reductases (SDR) family - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001422 312.0
DYD1_k127_251522_0 Belongs to the argininosuccinate synthase family. Type 1 subfamily K01940 - 6.3.4.5 5.507e-234 728.0
DYD1_k127_251522_1 Belongs to the NAGSA dehydrogenase family. Type 1 subfamily. LysY sub-subfamily K05829 - - 4.304e-222 690.0
DYD1_k127_251522_2 Lysine biosynthesis K05827 - 6.3.2.43 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003461 484.0
DYD1_k127_251522_3 - - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001336 409.0
DYD1_k127_251522_4 Involved in both the arginine and lysine biosynthetic pathways. Phosphorylates the LysW-bound precursors glutamate (for arginine biosynthesis), respectively alpha-aminoadipate (for lysine biosynthesis) K05828 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000144 332.0
DYD1_k127_251522_5 Cobalamin B12-binding domain protein - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000008056 258.0
DYD1_k127_251522_6 Catalyzes the irreversible transfer of a propylamine group from the amino donor S-adenosylmethioninamine (decarboxy- AdoMet) to putrescine (1,4-diaminobutane) to yield spermidine K00797 GO:0003674,GO:0003824,GO:0004766,GO:0006576,GO:0006595,GO:0006596,GO:0006807,GO:0008150,GO:0008152,GO:0008216,GO:0008295,GO:0009058,GO:0009308,GO:0009309,GO:0009987,GO:0010487,GO:0016740,GO:0016765,GO:0034641,GO:0042401,GO:0043918,GO:0043919,GO:0044106,GO:0044237,GO:0044249,GO:0044271,GO:0050314,GO:0071704,GO:0097164,GO:1901564,GO:1901566,GO:1901576 2.5.1.16 0.00000000000000000000000000000007278 130.0
DYD1_k127_251522_7 lysine biosynthesis protein LysW K05826 - - 0.000000000000000000000000003544 110.0
DYD1_k127_2602986_0 SMC proteins Flexible Hinge Domain K03529 - - 0.0 1599.0
DYD1_k127_2602986_1 Catalyzes the attachment of proline to tRNA(Pro) in a two-step reaction proline is first activated by ATP to form Pro- AMP and then transferred to the acceptor end of tRNA(Pro) K01881 - 6.1.1.15 4.235e-267 827.0
DYD1_k127_2602986_10 - - - - 0.0000000000000000000000000000000000000000008787 160.0
DYD1_k127_2602986_11 - - - - 0.0000000000000000000000000000003267 124.0
DYD1_k127_2602986_12 membrane - - - 0.0000000000000000000006825 100.0
DYD1_k127_2602986_13 - - - - 0.0000000000000008089 83.0
DYD1_k127_2602986_14 - - - - 0.000000000000002508 77.0
DYD1_k127_2602986_15 PFAM blue (type 1) copper domain protein - - - 0.0007058 43.0
DYD1_k127_2602986_2 Myo-inositol-1-phosphate synthase K01858 - 5.5.1.4 6.038e-213 663.0
DYD1_k127_2602986_3 PFAM Radical SAM domain protein - - - 1.072e-210 657.0
DYD1_k127_2602986_4 Archaeal Nre, N-terminal - - - 2.372e-195 614.0
DYD1_k127_2602986_5 SNARE associated Golgi protein - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009467 311.0
DYD1_k127_2602986_6 Lysine exporter protein LysE YggA - - - 0.000000000000000000000000000000000000000000000000000000000000000000000008788 248.0
DYD1_k127_2602986_7 Cation efflux family K16264 - - 0.0000000000000000000000000000000000000000000000000000000000000586 224.0
DYD1_k127_2602986_8 Binds double-stranded DNA tightly but without sequence specificity. It is distributed uniformly and abundantly on the chromosome, suggesting a role in chromatin architecture. However, it does not significantly compact DNA. Binds rRNA and mRNA in vivo. May play a role in maintaining the structural and functional stability of RNA, and, perhaps, ribosomes K03622 GO:0003674,GO:0005488,GO:0005515,GO:0042802 - 0.0000000000000000000000000000000000000000000006848 167.0
DYD1_k127_2602986_9 - - - - 0.0000000000000000000000000000000000000000002608 159.0
DYD1_k127_2643683_0 Peptidase family M3 K08602 - - 1.474e-290 902.0
DYD1_k127_2643683_1 PFAM Alcohol dehydrogenase GroES-like domain - - - 1.949e-219 682.0
DYD1_k127_2643683_10 May be involved in maturation of the 30S ribosomal subunit K02966 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000003107 266.0
DYD1_k127_2643683_11 Belongs to the PDCD5 family K06875 - - 0.00000000000000000000000000000000000005834 143.0
DYD1_k127_2643683_12 Part of ribonuclease P, a protein complex that generates mature tRNA molecules by cleaving their 5'-ends K03540 - 3.1.26.5 0.00000000000000000000000000000008739 127.0
DYD1_k127_2643683_14 4-oxalocrotonate tautomerase K01821 - 5.3.2.6 0.0000000008558 61.0
DYD1_k127_2643683_2 Converts heme B (protoheme IX) to heme O by substitution of the vinyl group on carbon 2 of heme B porphyrin ring with a hydroxyethyl farnesyl side group K02257 - 2.5.1.141 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004294 513.0
DYD1_k127_2643683_3 HpcH/HpaI aldolase/citrate lyase family K01644 - 4.1.3.34 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002365 449.0
DYD1_k127_2643683_4 metal-dependent hydrolase of the TIM-barrel fold K07045 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005497 421.0
DYD1_k127_2643683_5 Na -dependent transporter K03453 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001709 367.0
DYD1_k127_2643683_7 Methyltransferase involved in ribosomal biogenesis. Specifically catalyzes the N1-methylation of the pseudouridine corresponding to position 914 in M.jannaschii 16S rRNA K14568 - 2.1.1.260 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000002666 286.0
DYD1_k127_2643683_8 Lrp/AsnC ligand binding domain K03718 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000005813 279.0
DYD1_k127_2643683_9 PFAM GCN5-related N-acetyltransferase K03789 - 2.3.1.128 0.00000000000000000000000000000000000000000000000000000000000000000000000000000001946 273.0
DYD1_k127_2650729_0 LOR SDH bifunctional - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001745 432.0
DYD1_k127_2650729_1 methanogenesis marker protein 1 K09136 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008069 399.0
DYD1_k127_2650729_2 PFAM TfuA domain protein, core - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004133 314.0
DYD1_k127_2650729_3 Cobalamin adenosyltransferase K00798 - 2.5.1.17 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000001778 290.0
DYD1_k127_2650729_4 HD domain K07023 - - 0.000000000000000000000000000000000000000000000000000000000000007847 220.0
DYD1_k127_2650729_5 - - - - 0.00000000000000000000000000000000000000000000000000004739 188.0
DYD1_k127_2650729_6 response regulator, receiver - - - 0.0000000000000000000004521 100.0
DYD1_k127_2650729_7 zinc finger - - - 0.0000000000000005916 77.0
DYD1_k127_2675948_0 Aldo/keto reductase family - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007879 452.0
DYD1_k127_2675948_1 - - - - 0.000000000000000000000000000000000000000000000000000003655 197.0
DYD1_k127_2675948_2 Protein of unknown function (DUF1326) - - - 0.000000000000000000000000000000000000000000006938 169.0
DYD1_k127_2675948_4 TIGRFAM RNA methyltransferase, TrmH family, group 1 - - - 0.0000000000000000000000000003431 123.0
DYD1_k127_2675948_6 - - GO:0003674,GO:0003756,GO:0003824,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006091,GO:0006807,GO:0008150,GO:0008152,GO:0009507,GO:0009532,GO:0009534,GO:0009535,GO:0009536,GO:0009570,GO:0009579,GO:0009765,GO:0009987,GO:0010206,GO:0015979,GO:0016020,GO:0016853,GO:0016860,GO:0016864,GO:0019538,GO:0019684,GO:0030091,GO:0031976,GO:0031984,GO:0034357,GO:0042651,GO:0043170,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0044237,GO:0044238,GO:0044260,GO:0044267,GO:0044422,GO:0044424,GO:0044434,GO:0044435,GO:0044436,GO:0044444,GO:0044446,GO:0044464,GO:0055035,GO:0071704,GO:0140096,GO:1901564 - 0.0001546 46.0
DYD1_k127_2842141_0 Involved in DNA repair and in homologous recombination. Binds and assemble on single-stranded DNA to form a nucleoprotein filament. Hydrolyzes ATP in a ssDNA-dependent manner and promotes DNA strand exchange between homologous DNA molecules K04483 GO:0000150,GO:0000217,GO:0000400,GO:0000724,GO:0000725,GO:0000730,GO:0003674,GO:0003676,GO:0003677,GO:0003690,GO:0003697,GO:0003824,GO:0005488,GO:0006139,GO:0006259,GO:0006281,GO:0006302,GO:0006310,GO:0006312,GO:0006725,GO:0006807,GO:0006950,GO:0006974,GO:0008094,GO:0008150,GO:0008152,GO:0009314,GO:0009628,GO:0009987,GO:0010212,GO:0016043,GO:0016462,GO:0016787,GO:0016817,GO:0016818,GO:0016887,GO:0017111,GO:0022607,GO:0033554,GO:0034622,GO:0034641,GO:0042148,GO:0042623,GO:0043170,GO:0043933,GO:0044085,GO:0044237,GO:0044238,GO:0044260,GO:0045003,GO:0046483,GO:0050896,GO:0051716,GO:0065003,GO:0065004,GO:0071704,GO:0071824,GO:0071840,GO:0090304,GO:0090735,GO:0097159,GO:0140097,GO:1901360,GO:1901363 - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000057 613.0
DYD1_k127_2842141_1 Belongs to the glyceraldehyde-3-phosphate dehydrogenase family K00150 - 1.2.1.59 8.092e-194 607.0
DYD1_k127_2842141_10 - - - - 0.00000000000004984 74.0
DYD1_k127_2842141_12 The beta subunit is responsible for the synthesis of L- tryptophan from indole and L-serine K01696 - 4.2.1.20 0.00001275 47.0
DYD1_k127_2842141_2 Catalyzes the transfer of the phosphoribosyl group of 5- phosphorylribose-1-pyrophosphate (PRPP) to anthranilate to yield N-(5'-phosphoribosyl)-anthranilate (PRA) K00766 - 2.4.2.18 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000479 512.0
DYD1_k127_2842141_3 archaeal coiled-coil protein - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001703 349.0
DYD1_k127_2842141_4 The alpha subunit is responsible for the aldol cleavage of indoleglycerol phosphate to indole and glyceraldehyde 3- phosphate K01695 - 4.2.1.20 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001019 347.0
DYD1_k127_2842141_5 Glutamine amidotransferase of anthranilate synthase K01658 - 4.1.3.27 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002654 340.0
DYD1_k127_2842141_7 - - - - 0.000000000000000000000000000000000000005011 151.0
DYD1_k127_2847802_0 histidyl-tRNA synthetase K01892 - 6.1.1.21 3.359e-198 627.0
DYD1_k127_2847802_1 fumarate reductase flavoprotein K00239 - 1.3.5.1,1.3.5.4 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007722 538.0
DYD1_k127_2847802_10 domain, Protein K15125,K19231 - - 0.000000000000000000000000000000000000000000125 177.0
DYD1_k127_2847802_11 - - - - 0.0000000000000000000000000000000000001042 144.0
DYD1_k127_2847802_13 Coenzyme PQQ synthesis protein D (PqqD) - - - 0.00000000000000000000000000000002954 128.0
DYD1_k127_2847802_14 - - - - 0.0000000000000000000000000000005565 125.0
DYD1_k127_2847802_17 Transcriptional regulator - - - 0.0000000000000006435 80.0
DYD1_k127_2847802_18 amine dehydrogenase activity K01219 - 3.2.1.81 0.000000000000006083 88.0
DYD1_k127_2847802_2 Structure-specific nuclease with 5'-flap endonuclease and 5'-3' exonuclease activities involved in DNA replication and repair. During DNA replication, cleaves the 5'-overhanging flap structure that is generated by displacement synthesis when DNA polymerase encounters the 5'-end of a downstream Okazaki fragment. Binds the unpaired 3'-DNA end and kinks the DNA to facilitate 5' cleavage specificity. Cleaves one nucleotide into the double- stranded DNA from the junction in flap DNA, leaving a nick for ligation. Also involved in the base excision repair (BER) pathway. Acts as a genome stabilization factor that prevents flaps from equilibrating into K04799 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002429 516.0
DYD1_k127_2847802_3 Belongs to the MCM family K10726 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001251 391.0
DYD1_k127_2847802_4 Ferritin-like domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007982 355.0
DYD1_k127_2847802_5 Major Intrinsic Protein K06188,K09866 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002897 346.0
DYD1_k127_2847802_6 Archease protein family (MTH1598/TM1083) - - - 0.0000000000000000000000000000000000000000000000000000000000001399 214.0
DYD1_k127_2847802_8 metal-dependent protease of the PAD1 JAB1 superfamily - - - 0.0000000000000000000000000000000000000000000000000002233 188.0
DYD1_k127_2847802_9 - - - - 0.00000000000000000000000000000000000000000000001923 171.0
DYD1_k127_2878098_0 Catalyzes the NADPH-dependent reduction of glutamyl- tRNA(Glu) to glutamate 1-semialdehyde (GSA) K02492 - 1.2.1.70 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006533 574.0
DYD1_k127_2878098_1 D-aminoacyl-tRNA deacylase with broad substrate specificity. By recycling D-aminoacyl-tRNA to D-amino acids and free tRNA molecules, this enzyme counteracts the toxicity associated with the formation of D-aminoacyl-tRNA entities in vivo K09716 - 3.1.1.96 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009335 384.0
DYD1_k127_2878098_10 6-O-methylguanine DNA methyltransferase, DNA binding domain K00567 - 2.1.1.63 0.00000000000000000000000000000000008732 136.0
DYD1_k127_2878098_11 PFAM GvpD gas vesicle - - - 0.00000000000000000000000000001107 134.0
DYD1_k127_2878098_12 His Kinase A (phosphoacceptor) domain K13587 - 2.7.13.3 0.00000000000002083 78.0
DYD1_k127_2878098_14 - - - - 0.0000000007409 72.0
DYD1_k127_2878098_15 Transcriptional regulator - - - 0.000000001382 66.0
DYD1_k127_2878098_16 Transcriptional regulator - - - 0.0000001635 57.0
DYD1_k127_2878098_2 Siroheme synthase K02304 - 1.3.1.76,4.99.1.4 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003133 321.0
DYD1_k127_2878098_3 Delta-aminolevulinic acid dehydratase K01698 - 4.2.1.24 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000003684 282.0
DYD1_k127_2878098_4 Glycosyl transferase 4-like domain K21011 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000003831 291.0
DYD1_k127_2878098_5 Transcription elongation factor Spt5 K02601 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000001076 274.0
DYD1_k127_2878098_6 Binds to the 23S rRNA K02885 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000005375 253.0
DYD1_k127_2878098_7 RmlD substrate binding domain K01784,K02473,K03274,K08678 - 4.1.1.35,5.1.3.2,5.1.3.20,5.1.3.7 0.00000000000000000000000000000000000000000000000000000000000000000000000172 259.0
DYD1_k127_2878098_8 ribosomal protein K02912 - - 0.0000000000000000000000000000000000000000000000000000000008509 209.0
DYD1_k127_2878098_9 LmbE homologs - - - 0.000000000000000000000000000000000000000000004678 171.0
DYD1_k127_2935602_0 Methionine synthase K00548 - 2.1.1.13 0.0 1380.0
DYD1_k127_2935602_1 PFAM tRNA synthetase, class II (D, K and N) K01893 GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0044424,GO:0044464 6.1.1.22 1.158e-235 733.0
DYD1_k127_2935602_2 homocysteine S-methyltransferase K00548 - 2.1.1.13 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001212 541.0
DYD1_k127_2935602_3 Binds double-stranded DNA tightly but without sequence specificity. It is distributed uniformly and abundantly on the chromosome, suggesting a role in chromatin architecture. However, it does not significantly compact DNA. Binds rRNA and mRNA in vivo. May play a role in maintaining the structural and functional stability of RNA, and, perhaps, ribosomes K03622 GO:0003674,GO:0005488,GO:0005515,GO:0042802 - 0.00000000000000000000004802 105.0
DYD1_k127_2935602_4 - - - - 0.0000000000001021 75.0
DYD1_k127_2935602_5 - - - - 0.00000001412 60.0
DYD1_k127_2986611_0 - - - - 0.0000000000000000000000000000000002063 135.0
DYD1_k127_2986611_2 - - - - 0.000000005931 61.0
DYD1_k127_2986611_4 Transcriptional regulator - - - 0.00000645 52.0
DYD1_k127_298885_0 von Willebrand factor (vWF) type A domain - - - 8.659e-277 860.0
DYD1_k127_298885_1 ATPase family associated with various cellular activities (AAA) K04748 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003221 460.0
DYD1_k127_2993645_0 Cell division protein 48 (CDC48) domain 2 K13525 - - 0.0 1256.0
DYD1_k127_2993645_1 Catalyzes the attachment of L-aspartate to tRNA(Asp) in a two-step reaction L-aspartate is first activated by ATP to form Asp-AMP and then transferred to the acceptor end of tRNA(Asp) - - - 3.751e-247 766.0
DYD1_k127_2993645_10 Zn-ribbon RNA-binding protein with a function in translation K07580 - - 0.000000000000000000000000000000001427 130.0
DYD1_k127_2993645_2 Converts heme B (protoheme IX) to heme O by substitution of the vinyl group on carbon 2 of heme B porphyrin ring with a hydroxyethyl farnesyl side group K02257 - 2.5.1.141 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006597 522.0
DYD1_k127_2993645_3 PFAM blue (type 1) copper domain protein - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001021 504.0
DYD1_k127_2993645_4 Is involved in the reduction of 2,3- digeranylgeranylglycerophospholipids (unsaturated archaeols) into 2,3-diphytanylglycerophospholipids (saturated archaeols) in the biosynthesis of archaeal membrane lipids. Catalyzes the formation of archaetidic acid (2,3-di-O-phytanyl-sn-glyceryl phosphate) from 2,3-di-O-geranylgeranylglyceryl phosphate (DGGGP) via the hydrogenation of each double bond of the isoprenoid chains - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000386 276.0
DYD1_k127_2993645_5 Transcription elongation factor - - - 0.0000000000000000000000000000000000000000000000000000000000000002464 224.0
DYD1_k127_2993645_7 Promotes the exchange of GDP for GTP in EF-1-alpha GDP, thus allowing the regeneration of EF-1-alpha GTP that could then be used to form the ternary complex EF-1-alpha GTP AAtRNA K03232 - - 0.0000000000000000000000000000000000004086 141.0
DYD1_k127_2993645_8 metal-dependent protease of the PAD1 JAB1 superfamily K21140 - 3.13.1.6 0.0000000000000000000000000000000004082 136.0
DYD1_k127_2993645_9 - - - - 0.0000000000000000000000000000000004134 132.0
DYD1_k127_3009839_0 Metal dependent phosphohydrolases with conserved 'HD' motif. K06885 - - 8.799e-206 647.0
DYD1_k127_3009839_1 - - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001372 375.0
DYD1_k127_3009839_2 thymidylate kinase K00943 - 2.7.4.9 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000175 330.0
DYD1_k127_3009839_3 Catalyzes the reversible phosphorylation of UMP to UDP K09903 - 2.7.4.22 0.000000000000000000000000000000000000000000000000000000000000000000000001377 256.0
DYD1_k127_3009839_4 Belongs to the small heat shock protein (HSP20) family - - - 0.0000000000000000000000000000000000000000000000005411 182.0
DYD1_k127_3009839_5 Zn-ribbon RNA-binding protein with a function in translation K07580 - - 0.0000000000000000000000000001183 115.0
DYD1_k127_3010231_0 TIGRFAM glutamine synthetase, type I K01915 - 6.3.1.2 1.058e-291 900.0
DYD1_k127_3010231_1 Trypsin-like serine protease with C-terminal PDZ domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005717 499.0
DYD1_k127_3010231_10 NAD(P)H-dependent FMN reductase K00299 - 1.5.1.38 0.000000000000000000000000000000000000000000000000000000000000000000000000514 248.0
DYD1_k127_3010231_11 - - - - 0.000000000000000000000000000000000000000000000000000000000003697 222.0
DYD1_k127_3010231_12 Transcriptional regulator - - - 0.00000000000000000000000000000000000000000000000007441 180.0
DYD1_k127_3010231_13 PPIC-type PPIASE domain K07533 - 5.2.1.8 0.0000000000000000000000000000000000000000000003945 167.0
DYD1_k127_3010231_14 Sortilin, neurotensin receptor 3, - - - 0.000000000000000000000000000000000000002912 158.0
DYD1_k127_3010231_15 Belongs to the SUI1 family K03113 GO:0001731,GO:0002181,GO:0002183,GO:0002188,GO:0002190,GO:0002192,GO:0003674,GO:0003676,GO:0003723,GO:0003729,GO:0003743,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006412,GO:0006413,GO:0006518,GO:0006807,GO:0008135,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0016043,GO:0019538,GO:0022607,GO:0022613,GO:0022618,GO:0032991,GO:0034622,GO:0034641,GO:0034645,GO:0043021,GO:0043022,GO:0043043,GO:0043170,GO:0043603,GO:0043604,GO:0043933,GO:0044085,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044424,GO:0044444,GO:0044464,GO:0044877,GO:0065003,GO:0070992,GO:0071704,GO:0071826,GO:0071840,GO:0097159,GO:0110017,GO:1901363,GO:1901564,GO:1901566,GO:1901576,GO:1990904 - 0.000000000000000000000000000000000001404 140.0
DYD1_k127_3010231_16 - - - - 0.0000000000000000000000000000000000019 138.0
DYD1_k127_3010231_18 - - - - 0.000000000000000000000000001147 114.0
DYD1_k127_3010231_2 Pyridine nucleotide-disulphide oxidoreductase K17218 - 1.8.5.4 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001538 497.0
DYD1_k127_3010231_3 Belongs to the short-chain dehydrogenases reductases (SDR) family - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001117 398.0
DYD1_k127_3010231_4 Proteasome endopeptidase complex K03432 - 3.4.25.1 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003695 359.0
DYD1_k127_3010231_5 Component of the proteasome core, a large protease complex with broad specificity involved in protein degradation K03433 GO:0000502,GO:0003674,GO:0003824,GO:0004175,GO:0005575,GO:0005622,GO:0005623,GO:0005839,GO:0006508,GO:0006807,GO:0008150,GO:0008152,GO:0008233,GO:0009056,GO:0009057,GO:0009987,GO:0010498,GO:0016787,GO:0019538,GO:0019774,GO:0030163,GO:0032991,GO:0043170,GO:0044237,GO:0044238,GO:0044248,GO:0044257,GO:0044260,GO:0044265,GO:0044267,GO:0044424,GO:0044464,GO:0051603,GO:0070011,GO:0071704,GO:0140096,GO:1901564,GO:1901565,GO:1901575,GO:1902494,GO:1905368,GO:1905369 3.4.25.1 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002543 330.0
DYD1_k127_3010231_6 - - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000001383 283.0
DYD1_k127_3010231_7 Essential cell division protein that forms a contractile ring structure (Z ring) at the future cell division site. The regulation of the ring assembly controls the timing and the location of cell division. One of the functions of the FtsZ ring is to recruit other cell division proteins to the septum to produce a new cell wall between the dividing cells. Binds GTP and shows GTPase activity K03531 GO:0000166,GO:0001882,GO:0001883,GO:0003674,GO:0003824,GO:0003924,GO:0005488,GO:0005525,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0008150,GO:0009987,GO:0016462,GO:0016787,GO:0016817,GO:0016818,GO:0017076,GO:0017111,GO:0019001,GO:0032153,GO:0032549,GO:0032550,GO:0032553,GO:0032555,GO:0032561,GO:0035639,GO:0036094,GO:0043167,GO:0043168,GO:0044424,GO:0044464,GO:0051301,GO:0097159,GO:0097367,GO:1901265,GO:1901363 - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000008264 289.0
DYD1_k127_3010231_8 Transcriptional regulator K07332 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000004408 273.0
DYD1_k127_3010231_9 protein conserved in archaea K09723 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000002464 251.0
DYD1_k127_3043150_0 Could be responsible for synthesis of pseudouridine from uracil-55 in the psi GC loop of transfer RNAs K11131 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001512 585.0
DYD1_k127_3043150_1 The central subunit of the protein translocation channel SecYEG. Consists of two halves formed by TMs 1-5 and 6-10. These two domains form a lateral gate at the front which open onto the bilayer between TMs 2 and 7, and are clamped together by SecE at the back. The channel is closed by both a pore ring composed of hydrophobic SecY resides and a short helix (helix 2A) on the extracellular side of the membrane which forms a plug. The plug probably moves laterally to allow the channel to open. The ring and the pore may move independently K03076 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004579 421.0
DYD1_k127_3043150_2 Belongs to the cytidylate kinase family. Type 2 subfamily K00945 - 2.7.4.25 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000001029 287.0
DYD1_k127_3043150_3 membrane - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000006708 256.0
DYD1_k127_3043150_4 Belongs to the archaeal adenylate kinase family K00939 - 2.7.4.3 0.00000000000000000000000000000000000000000000000000000000000000000000000002219 257.0
DYD1_k127_3053353_0 Proton-conducting membrane transporter K00342 - 1.6.5.3 1.84e-271 845.0
DYD1_k127_3053353_1 Belongs to the complex I 49 kDa subunit family K00333 - 1.6.5.3 6.662e-240 743.0
DYD1_k127_3053353_10 Belongs to the complex I subunit 6 family K00339,K05578 - 1.6.5.3 0.00000000001274 72.0
DYD1_k127_3053353_2 NADH dehydrogenase K00337 - 1.6.5.3 9.93e-219 683.0
DYD1_k127_3053353_3 geranylgeranyl reductase K17830 - 1.3.1.101,1.3.7.11 4.659e-205 643.0
DYD1_k127_3053353_4 TIGRFAM proton-translocating NADH-quinone oxidoreductase, chain L K00341 - 1.6.5.3 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002598 481.0
DYD1_k127_3053353_5 Belongs to the complex I 20 kDa subunit family K00331 - 1.6.5.3 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005263 330.0
DYD1_k127_3053353_6 4Fe-4S binding domain K00338 - 1.6.5.3 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001692 325.0
DYD1_k127_3053353_7 NADH ubiquinone oxidoreductase 27 kD subunit K00332 - 1.6.5.3 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000001941 289.0
DYD1_k127_3053353_8 PFAM NADH-ubiquinone plastoquinone oxidoreductase chain 3 K00330 - 1.6.5.3 0.00000000000000000000000000000000000000000000000000000000000000000000000754 244.0
DYD1_k127_3053353_9 NADH ubiquinone oxidoreductase subunit 11 or 4L (chain K) K00340 - 1.6.5.3 0.00000000000000000000000000000000000000000006915 162.0
DYD1_k127_3084784_0 von Willebrand factor, type A K07114 - - 4.194e-229 713.0
DYD1_k127_3084784_1 Cysteine synthase K12339 - 2.5.1.47 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005079 587.0
DYD1_k127_3084784_10 COG0607 Rhodanese-related sulfurtransferase K03406,K21028 - 2.8.1.11 0.0000006047 52.0
DYD1_k127_3084784_11 Myo-inositol-1-phosphate synthase K01858 - 5.5.1.4 0.00002196 47.0
DYD1_k127_3084784_2 Pyridine nucleotide-disulphide oxidoreductase K00384 - 1.8.1.9 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001955 566.0
DYD1_k127_3084784_3 Involved in the biosynthesis of the thiazole moiety of thiamine. Catalyzes the conversion of NAD and glycine to adenosine diphosphate 5-(2-hydroxyethyl)-4-methylthiazole-2-carboxylate (ADT), an adenylated thiazole intermediate, using free sulfide as a source of sulfur K03146 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001777 516.0
DYD1_k127_3084784_4 phosphoserine phosphatase K01079 - 3.1.3.3 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008355 355.0
DYD1_k127_3084784_5 - - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000001825 288.0
DYD1_k127_3084784_6 F420-0:Gamma-glutamyl ligase K12234 - 6.3.2.31,6.3.2.34 0.000000000000000000000000000000000000000000000000000000000000000000000567 244.0
DYD1_k127_3084784_7 redox protein, regulator of disulfide bond formation - - - 0.00000000000000000000000000000000000004791 143.0
DYD1_k127_3084784_8 DNA ligase that catalyzes the formation of phosphodiester linkages between 5'-phosphoryl and 3'-hydroxyl groups in double-stranded DNA using NAD as a coenzyme and as the energy source for the reaction. It is essential for DNA replication and repair of damaged DNA K01972 GO:0000287,GO:0003674,GO:0003824,GO:0003909,GO:0003911,GO:0005488,GO:0005575,GO:0005618,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005886,GO:0006139,GO:0006259,GO:0006266,GO:0006281,GO:0006284,GO:0006288,GO:0006725,GO:0006807,GO:0006950,GO:0006974,GO:0008150,GO:0008152,GO:0009987,GO:0016020,GO:0016874,GO:0016886,GO:0030312,GO:0033554,GO:0034641,GO:0040007,GO:0043167,GO:0043169,GO:0043170,GO:0044237,GO:0044238,GO:0044260,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0046872,GO:0050896,GO:0051103,GO:0051716,GO:0071704,GO:0071944,GO:0090304,GO:0140097,GO:1901360 6.5.1.2 0.0000000000002792 72.0
DYD1_k127_3084784_9 COG0607 Rhodanese-related sulfurtransferase K03406,K21028 - 2.8.1.11 0.0000001712 53.0
DYD1_k127_318439_0 Sodium hydrogen exchanger - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000131 556.0
DYD1_k127_318439_3 response regulator, receiver - - - 0.00000000000006527 74.0
DYD1_k127_318439_4 cation diffusion facilitator family transporter - - - 0.0008483 42.0
DYD1_k127_3209676_0 FeS assembly protein SufB K09014 - - 1.854e-294 905.0
DYD1_k127_3209676_1 Catalyzes the removal of elemental sulfur and selenium atoms from L-cysteine, L-cystine, L-selenocysteine, and L- selenocystine to produce L-alanine K11717 - 2.8.1.7,4.4.1.16 3.379e-246 763.0
DYD1_k127_3209676_10 Pfam:DUF137 K09722 - 6.3.2.36 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005117 357.0
DYD1_k127_3209676_11 Acid phosphatase homologues K19302 - 3.6.1.27 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006945 319.0
DYD1_k127_3209676_12 kinase, sugar kinase superfamily K06982 - 2.7.1.169 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001907 301.0
DYD1_k127_3209676_13 SUF system FeS assembly protein K04488 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000002754 263.0
DYD1_k127_3209676_14 Nudix hydrolase K03574 - 3.6.1.55 0.000000000000000000000000000000000000000000000000000000000000000001195 229.0
DYD1_k127_3209676_15 Iron-sulfur cluster assembly accessory protein K13628 - - 0.0000000000000000000000000000000000000000000000000000000000001412 213.0
DYD1_k127_3209676_16 of nitrite reductase and ring-hydroxylating K05710 - - 0.000000000000000000000000000000000000000002961 157.0
DYD1_k127_3209676_17 - - - - 0.000000000000000000000000000000000000006278 147.0
DYD1_k127_3209676_19 mttA/Hcf106 family K03116 - - 0.00000000000000000000000000000000354 131.0
DYD1_k127_3209676_2 Belongs to the Glu Leu Phe Val dehydrogenases family K00261 - 1.4.1.3 9.408e-244 756.0
DYD1_k127_3209676_3 FeS assembly protein SufD K09014,K09015 - - 1.095e-231 726.0
DYD1_k127_3209676_4 Aminotransferase class-V - - - 5.714e-220 685.0
DYD1_k127_3209676_5 Catalyzes two steps in the biosynthesis of coenzyme A. In the first step cysteine is conjugated to 4'-phosphopantothenate to form 4-phosphopantothenoylcysteine, in the latter compound is decarboxylated to form 4'-phosphopantotheine K13038 - 4.1.1.36,6.3.2.5 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000682 597.0
DYD1_k127_3209676_6 Belongs to the peptidase M24B family K01262,K01271 - 3.4.11.9,3.4.13.9 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002061 584.0
DYD1_k127_3209676_7 Catalyzes the reversible reaction in which hydroxymethyl group from 5,10-methylenetetrahydrofolate is transferred onto alpha-ketoisovalerate to form ketopantoate K00606 - 2.1.2.11 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001067 448.0
DYD1_k127_3209676_8 PFAM Radical SAM domain protein - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009064 421.0
DYD1_k127_3209676_9 Peptidyl-prolyl cis-trans K01802 - 5.2.1.8 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000012 373.0
DYD1_k127_3226026_0 Catalyzes the gamma-elimination of phosphate from L- phosphohomoserine and the beta-addition of water to produce L- threonine K01733 - 4.2.3.1 5.934e-234 726.0
DYD1_k127_3226026_1 ThiF family K21029 - 2.7.7.80 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002595 556.0
DYD1_k127_3228152_0 DHHA1 domain K07463 - - 2.388e-249 775.0
DYD1_k127_3228152_1 Catalyzes the attachment of serine to tRNA(Ser). Is also able to aminoacylate tRNA(Sec) with serine, to form the misacylated tRNA L-seryl-tRNA(Sec), which will be further converted into selenocysteinyl-tRNA(Sec) K01875 - 6.1.1.11 1.263e-205 646.0
DYD1_k127_3228152_10 RNA binding K07581 - - 0.0000000000000000000000000000000000000000000001669 171.0
DYD1_k127_3228152_11 - - - - 0.000000000000000000000000000000000000000007459 155.0
DYD1_k127_3228152_14 - - - - 0.000000000000000000001167 102.0
DYD1_k127_3228152_15 Part of ribonuclease P, a protein complex that generates mature tRNA molecules by cleaving their 5'-ends K03537 GO:0000966,GO:0001682,GO:0003674,GO:0003824,GO:0004518,GO:0004519,GO:0004521,GO:0004526,GO:0004540,GO:0004549,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006139,GO:0006396,GO:0006399,GO:0006464,GO:0006725,GO:0006807,GO:0008033,GO:0008150,GO:0008152,GO:0009249,GO:0009987,GO:0010467,GO:0016070,GO:0016787,GO:0016788,GO:0016891,GO:0016893,GO:0018065,GO:0018193,GO:0018205,GO:0019538,GO:0030677,GO:0032991,GO:0034470,GO:0034471,GO:0034641,GO:0034660,GO:0036211,GO:0043170,GO:0043412,GO:0044237,GO:0044238,GO:0044260,GO:0044267,GO:0044424,GO:0044464,GO:0046483,GO:0051604,GO:0071704,GO:0090304,GO:0090305,GO:0090501,GO:0090502,GO:0099116,GO:0140098,GO:0140101,GO:1901360,GO:1901564,GO:1902494,GO:1902555,GO:1905348,GO:1990904 3.1.26.5 0.0000000000000004815 81.0
DYD1_k127_3228152_2 Glycosyl transferase family 1 - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000726 570.0
DYD1_k127_3228152_3 Radical SAM - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000525 504.0
DYD1_k127_3228152_4 Belongs to the eukaryotic ribosomal protein eS1 family K02984 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004713 382.0
DYD1_k127_3228152_5 Protein of unknown function DUF47 K07220 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006764 344.0
DYD1_k127_3228152_6 tRNA intron endonuclease, N-terminal domain K01170 - 4.6.1.16 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001092 309.0
DYD1_k127_3228152_8 ribosomal protein K02956 - - 0.00000000000000000000000000000000000000000000000000000000000000000000326 237.0
DYD1_k127_3228152_9 HIT domain K02503 - - 0.000000000000000000000000000000000000000000000000000000000000001054 224.0
DYD1_k127_3242538_0 Catalyzes the ATP-dependent amination of UTP to CTP with either L-glutamine or ammonia as the source of nitrogen. Regulates intracellular CTP levels through interactions with the four ribonucleotide triphosphates K01937 - 6.3.4.2 1.222e-306 944.0
DYD1_k127_3242538_1 The beta subunit is responsible for the synthesis of L- tryptophan from indole and L-serine K01696 - 4.2.1.20 3.985e-208 651.0
DYD1_k127_3242538_10 regulatory protein, arsR - - - 0.0000000000000000000000000000001785 125.0
DYD1_k127_3242538_11 Catalyzes the N-acylation of UDP-3-O-acylglucosamine using 3-hydroxyacyl-ACP as the acyl donor. Is involved in the biosynthesis of lipid A, a phosphorylated glycolipid that anchors the lipopolysaccharide to the outer membrane of the cell K02536 - 2.3.1.191 0.0000000000000000000000000000006693 135.0
DYD1_k127_3242538_2 Involved in regulation of DNA replication K10725 - - 4.137e-207 649.0
DYD1_k127_3242538_3 COG2133 Glucose sorbosone dehydrogenases K21430 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000847 439.0
DYD1_k127_3242538_4 pfkB family carbohydrate kinase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004299 430.0
DYD1_k127_3242538_5 Involved in the regulation of the intracellular balance of NAD and NADP, and is a key enzyme in the biosynthesis of NADP. Catalyzes specifically the phosphorylation on 2'-hydroxyl of the adenosine moiety of NAD to yield NADP K00858 - 2.7.1.23 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001812 365.0
DYD1_k127_3242538_6 Indole-3-glycerol phosphate synthase K01609 - 4.1.1.48 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001755 351.0
DYD1_k127_3242538_7 Belongs to the CDP-alcohol phosphatidyltransferase class-I family K17884 - 2.7.8.39 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000003599 287.0
DYD1_k127_3242538_8 ribosomal protein K02976 - - 0.0000000000000000000000000000000000000000000000005277 175.0
DYD1_k127_3270650_0 Amino acid kinase family K00928 - 2.7.2.4 8.205e-237 739.0
DYD1_k127_3270650_1 CBS domain K03498 - - 1.342e-222 708.0
DYD1_k127_3270650_10 Winged helix-turn-helix - - - 0.00000000000000000003025 96.0
DYD1_k127_3270650_12 response regulator, receiver - - - 0.000000000000001143 81.0
DYD1_k127_3270650_2 Binds to the 50S ribosomal subunit and prevents its association with the 30S ribosomal subunit to form the 70S initiation complex K03264 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000984 347.0
DYD1_k127_3270650_3 nucleotide-utilizing enzyme related to molybdopterin-biosynthesis enzyme MoeA - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002323 352.0
DYD1_k127_3270650_4 PFAM Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase K07709 - 2.7.13.3 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009831 361.0
DYD1_k127_3270650_5 Belongs to the class-IV pyridoxal-phosphate-dependent aminotransferase family K00826 - 2.6.1.42 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009149 335.0
DYD1_k127_3270650_6 Seems to be required for maximal rate of protein biosynthesis. Enhances ribosome dissociation into subunits and stabilizes the binding of the initiator Met-tRNA(I) to 40 S ribosomal subunits K03236 - - 0.00000000000000000000000000000000000000000000000008246 179.0
DYD1_k127_3270650_7 sister chromatid segregation - - - 0.00000000000000000000000000000000000001067 153.0
DYD1_k127_3270650_8 RNA-binding protein contains TRAM domain - - - 0.000000000000000000000000000009668 119.0
DYD1_k127_3270650_9 zinc finger - - - 0.00000000000000000000003057 103.0
DYD1_k127_3346039_1 Class II aldolase adducin family protein K01628,K03077 GO:0003674,GO:0003824,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005975,GO:0005996,GO:0008150,GO:0008152,GO:0008270,GO:0008738,GO:0009056,GO:0016052,GO:0016829,GO:0016830,GO:0016832,GO:0019321,GO:0019323,GO:0043167,GO:0043169,GO:0044238,GO:0044281,GO:0044282,GO:0044424,GO:0044444,GO:0044464,GO:0046365,GO:0046872,GO:0046914,GO:0071704,GO:1901575 4.1.2.17,5.1.3.4 0.00000000000000000000000000000000000000000000000000000000000000000000001949 245.0
DYD1_k127_3346039_2 carbon-nitrogen ligase activity, with glutamine as amido-N-donor - - - 0.00000000000000000000000000000000000000000000000000000001184 205.0
DYD1_k127_3346039_3 - - - - 0.00000000000000000000000000000000000000000000000000003367 191.0
DYD1_k127_3346039_4 DnaJ molecular chaperone homology domain K03686 - - 0.00000000000000000000000000000000000000000000000000007936 189.0
DYD1_k127_3346039_5 Polyketide cyclase dehydrase - - - 0.00000000000000000000000000000000000000000000001925 174.0
DYD1_k127_3346039_6 ATP synthase (F/14-kDa) subunit K02122 - - 0.000000000000000000000000000000000000000000003664 170.0
DYD1_k127_3346039_9 Lrp/AsnC ligand binding domain - - - 0.00001739 51.0
DYD1_k127_3374104_0 PFAM Adenylate and Guanylate cyclase catalytic domain K01768 - 4.6.1.1 0.0000000000000000000000007167 105.0
DYD1_k127_3374104_1 Domain of unknown function (DUF2024) - - - 0.000000000000000000002595 95.0
DYD1_k127_3374104_2 Universal stress protein - - - 0.000000000000000000666 87.0
DYD1_k127_3402630_0 - - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000004412 271.0
DYD1_k127_3402630_1 Belongs to the Dps family K04047 - - 0.000000000000000000000000000000000000000000000000000001245 196.0
DYD1_k127_3402630_2 CBS domain - - - 0.000000000000000000000000000000000000000000007397 166.0
DYD1_k127_3402630_3 signal transduction protein with CBS domains - - - 0.000000000000000001341 94.0
DYD1_k127_3432694_0 Poorly processive, error-prone DNA polymerase involved in untargeted mutagenesis. Copies undamaged DNA at stalled replication forks, which arise in vivo from mismatched or misaligned primer ends. These misaligned primers can be extended by PolIV. Exhibits no 3'-5' exonuclease (proofreading) activity. May be involved in translesional synthesis K04479 - 2.7.7.7 6.915e-226 715.0
DYD1_k127_3432694_1 COG1960 Acyl-CoA dehydrogenases K00252 - 1.3.8.6 6.606e-199 626.0
DYD1_k127_3432694_2 Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family K00823,K00836 - 2.6.1.19,2.6.1.76 4.52e-197 621.0
DYD1_k127_3432694_3 Protein of unknown function (DUF1326) - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003405 341.0
DYD1_k127_3432694_4 zinc finger - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003825 327.0
DYD1_k127_3432694_5 metal-binding integral membrane protein - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000003386 302.0
DYD1_k127_3432694_6 Dimerisation domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000254 241.0
DYD1_k127_3432694_7 - - - - 0.000000000000000000000000000000000000000000000000000005305 194.0
DYD1_k127_3518719_0 Cytochrome b subunit of the bc complex K00412 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003412 525.0
DYD1_k127_3518719_1 PFAM Copper binding proteins, plastocyanin azurin family - - - 0.000000000000000000000000000000000000000000000001104 179.0
DYD1_k127_3518719_2 - - - - 0.000000000000000000000000000000000000000000000001277 176.0
DYD1_k127_3518719_3 Protein of unknown function (DUF1326) - - - 0.000000000000000000000000000000009154 132.0
DYD1_k127_3518719_4 Protein of unknown function (DUF1326) - - - 0.0000009381 53.0
DYD1_k127_354697_0 Uncharacterised protein family (UPF0182) K09118 - - 0.0 1165.0
DYD1_k127_354697_1 Catalyzes the transfer of the enolpyruvyl moiety of phosphoenolpyruvate (PEP) to the 5-hydroxyl of shikimate-3- phosphate (S3P) to produce enolpyruvyl shikimate-3-phosphate and inorganic phosphate K00800 - 2.5.1.19 6.747e-207 651.0
DYD1_k127_354697_10 UbiA prenyltransferase K02548 - 2.5.1.74 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001257 459.0
DYD1_k127_354697_11 Tetratricopeptide repeat - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009303 453.0
DYD1_k127_354697_12 GHMP kinases N terminal domain K00891 - 2.7.1.71 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006943 441.0
DYD1_k127_354697_13 Involved in the biosynthesis of the chorismate, which leads to the biosynthesis of aromatic amino acids. Catalyzes the reversible NADPH linked reduction of 3-dehydroshikimate (DHSA) to yield shikimate (SA) K00014 - 1.1.1.25 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009635 427.0
DYD1_k127_354697_14 PFAM Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000189 432.0
DYD1_k127_354697_15 Endonuclease IV plays a role in DNA repair. It cleaves phosphodiester bonds at apurinic or apyrimidinic sites (AP sites) to produce new 5'-ends that are base-free deoxyribose 5-phosphate residues. It preferentially attacks modified AP sites created by bleomycin and neocarzinostatin K01151 - 3.1.21.2 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003405 394.0
DYD1_k127_354697_17 Involved in the third step of the chorismate pathway, which leads to the biosynthesis of aromatic amino acids. Catalyzes the cis-dehydration of 3-dehydroquinate (DHQ) and introduces the first double bond of the aromatic ring to yield 3- dehydroshikimate K03785 - 4.2.1.10 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000907 280.0
DYD1_k127_354697_18 glutamine amidotransferase K01951 - 6.3.5.2 0.00000000000000000000000000000000000000000000000000000000000000000003606 235.0
DYD1_k127_354697_19 Uncharacterized conserved protein (DUF2203) - - - 0.000000000000000000000000000000000000000000000000000000006396 203.0
DYD1_k127_354697_2 Catalyzes the anti-1,4-elimination of the C-3 phosphate and the C-6 proR hydrogen from 5-enolpyruvylshikimate-3-phosphate (EPSP) to yield chorismate, which is the branch point compound that serves as the starting substrate for the three terminal pathways of aromatic amino acid biosynthesis. This reaction introduces a second double bond into the aromatic ring system K01736 - 4.2.3.5 3.035e-198 622.0
DYD1_k127_354697_21 Transcriptional regulator K11924 - - 0.00000000000000000000000000000000000001726 145.0
DYD1_k127_354697_22 Pyridoxamine 5'-phosphate - - - 0.000000000000000000000000000000000003925 142.0
DYD1_k127_354697_23 - - - - 0.00000000000000000000000002172 111.0
DYD1_k127_354697_24 hydroxymethylglutaryl-CoA reductase (NADPH) activity K00021 - 1.1.1.34 0.00000000000006227 74.0
DYD1_k127_354697_26 Zinc-finger associated domain (zf-AD) K09228 GO:0003674,GO:0003676,GO:0003723,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005634,GO:0006950,GO:0006979,GO:0007154,GO:0007165,GO:0007610,GO:0008150,GO:0009266,GO:0009408,GO:0009628,GO:0009636,GO:0009987,GO:0010033,GO:0019932,GO:0019933,GO:0019935,GO:0023052,GO:0030534,GO:0032501,GO:0035556,GO:0042221,GO:0042493,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0044424,GO:0044464,GO:0045471,GO:0046677,GO:0048149,GO:0050789,GO:0050794,GO:0050896,GO:0051716,GO:0065007,GO:0097159,GO:0097305,GO:1901363,GO:1901700 - 0.0002416 44.0
DYD1_k127_354697_27 Psort location Cytoplasmic, score - - - 0.0007856 46.0
DYD1_k127_354697_3 Aldo/keto reductase family - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008445 576.0
DYD1_k127_354697_4 Catalyzes the oxidative deamination and cyclization of 2-amino-3,7-dideoxy-D-threo-hept-6-ulosonic acid (ADH) to yield 3- dehydroquinate (DHQ), which is fed into the canonical shikimic pathway of aromatic amino acid biosynthesis K11646 - 1.4.1.24 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009047 564.0
DYD1_k127_354697_5 Regulatory subunit of DNA primase, an RNA polymerase that catalyzes the synthesis of short RNA molecules used as primers for DNA polymerase during DNA replication. Stabilizes and modulates the activity of the small subunit, increasing the rate of DNA synthesis, and conferring RNA synthesis capability. The DNA polymerase activity may enable DNA primase to also catalyze primer extension after primer synthesis. May also play a role in DNA repair K18882 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001948 564.0
DYD1_k127_354697_6 DNA methylase K00571,K00590 - 2.1.1.113,2.1.1.72 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001711 543.0
DYD1_k127_354697_7 Catalytic subunit of DNA primase, an RNA polymerase that catalyzes the synthesis of short RNA molecules used as primers for DNA polymerase during DNA replication. The small subunit contains the primase catalytic core and has DNA synthesis activity on its own. Binding to the large subunit stabilizes and modulates the activity, increasing the rate of DNA synthesis while decreasing the length of the DNA fragments, and conferring RNA synthesis capability. The DNA polymerase activity may enable DNA primase to also catalyze primer extension after primer synthesis. May also play a role in DNA repair K02683 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009432 549.0
DYD1_k127_354697_8 Chorismate mutase type II K00812 - 2.6.1.1 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001944 485.0
DYD1_k127_354697_9 Catalyzes a transaldol reaction between 6-deoxy-5- ketofructose 1-phosphate (DKFP) and L-aspartate semialdehyde (ASA) with an elimination of hydroxypyruvaldehyde phosphate to yield 2- amino-3,7-dideoxy-D-threo-hept-6-ulosonate (ADH). Plays a key role in an alternative pathway of the biosynthesis of 3-dehydroquinate (DHQ), which is involved in the canonical pathway for the biosynthesis of aromatic amino acids K16306 - 2.2.1.10,4.1.2.13 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002172 469.0
DYD1_k127_3572574_0 Is involved in the reduction of 2,3- digeranylgeranylglycerophospholipids (unsaturated archaeols) into 2,3-diphytanylglycerophospholipids (saturated archaeols) in the biosynthesis of archaeal membrane lipids. Catalyzes the formation of archaetidic acid (2,3-di-O-phytanyl-sn-glyceryl phosphate) from 2,3-di-O-geranylgeranylglyceryl phosphate (DGGGP) via the hydrogenation of each double bond of the isoprenoid chains K17830 - 1.3.1.101,1.3.7.11 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000163 566.0
DYD1_k127_3572574_1 Thioesterase superfamily - - - 0.00000000000000000000000000000000000000000000000000000000000002229 218.0
DYD1_k127_3572574_2 more specifically in 18S rRNA pseudouridylation and in cleavage of pre-rRNA K11130 - - 0.00000000000000000001508 93.0
DYD1_k127_3583504_0 ABC-type nitrate sulfonate bicarbonate transport system, ATPase component K02049 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000112 417.0
DYD1_k127_3583504_1 cytochrome-c peroxidase activity - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003967 317.0
DYD1_k127_3583504_2 NUDIX domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000003071 258.0
DYD1_k127_3583504_3 - - - - 0.0000000000000000000000004888 110.0
DYD1_k127_3592570_0 Transcription factor that plays a role in the activation of archaeal genes transcribed by RNA polymerase. Facilitates transcription initiation by enhancing TATA-box recognition by TATA-box-binding protein (Tbp), and transcription factor B (Tfb) and RNA polymerase recruitment. Not absolutely required for transcription in vitro, but particularly important in cases where Tbp or Tfb function is not optimal. It dynamically alters the nucleic acid-binding properties of RNA polymerases by stabilizing the initiation complex and destabilizing elongation complexes. Seems to translocate with the RNA polymerase following initiation and acts by binding to the non template strand of the transcription bubble in elongation complexes K03136 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005877 332.0
DYD1_k127_3592570_1 Uracil-DNA glycosylase K21929 GO:0003674,GO:0003824,GO:0006139,GO:0006259,GO:0006281,GO:0006725,GO:0006807,GO:0006950,GO:0006974,GO:0008150,GO:0008152,GO:0009987,GO:0016787,GO:0016798,GO:0016799,GO:0019104,GO:0033554,GO:0034641,GO:0043170,GO:0044237,GO:0044238,GO:0044260,GO:0046483,GO:0050896,GO:0051716,GO:0071704,GO:0090304,GO:0097506,GO:0140097,GO:1901360 3.2.2.27 0.0000000000000000000000000000000000000000000000000000000000000000000000000000005306 270.0
DYD1_k127_3592570_2 Protein of unknown function (DUF541) K09807 - - 0.0000000000000000000000000000000000000000000000000000000000000000000001158 254.0
DYD1_k127_3592570_3 Nitroreductase - - - 0.000000000000000000000000000000000000000000000000000000000007802 208.0
DYD1_k127_3592570_4 Transcriptional regulator K07731 - - 0.00000000000000000000000000000003223 131.0
DYD1_k127_3592570_5 4-oxalocrotonate tautomerase K01821 - 5.3.2.6 0.0000000000000000000000000009839 112.0
DYD1_k127_3592570_6 PFAM Adenylate and Guanylate cyclase catalytic domain K01768 - 4.6.1.1 0.0000000000000000000003797 97.0
DYD1_k127_3592570_7 Nitroreductase - - - 0.000000000001221 67.0
DYD1_k127_3678707_0 aspartate carbamoyltransferase K00609 - 2.1.3.2 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003187 535.0
DYD1_k127_3678707_1 PFAM SPFH domain Band 7 family - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000491 488.0
DYD1_k127_3678707_2 - - - - 0.0000000000000000000000000000000000000000000000000000000000087 209.0
DYD1_k127_3678707_3 - - - - 0.000000000000000000000000000000000000001978 148.0
DYD1_k127_3678707_4 sister chromatid segregation - - - 0.00000000000000000000000000000000000003299 153.0
DYD1_k127_3678707_5 Pfam:DUF385 - - - 0.00000000000000000000000000292 115.0
DYD1_k127_3716807_0 DNA Topoisomerase I (eukaryota) K03163 - 5.99.1.2 8.514e-274 850.0
DYD1_k127_3716807_1 adenylosuccinate lyase K01756 - 4.3.2.2 2.666e-227 714.0
DYD1_k127_3716807_2 DEAD DEAH box helicase K06877 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002026 422.0
DYD1_k127_3716807_3 Belongs to the RtcB family K14415 - 6.5.1.3 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009341 387.0
DYD1_k127_3716807_4 zinc finger K03498 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001942 331.0
DYD1_k127_3716807_5 membrane-associated protein domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002073 333.0
DYD1_k127_3716807_6 D-glucuronyl C5-epimerase C-terminus - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001177 319.0
DYD1_k127_3716807_7 - - - - 0.000000000000000201 79.0
DYD1_k127_37950_0 ABC1 family - - - 9.307e-260 808.0
DYD1_k127_37950_1 PFAM (2R)-phospho-3-sulfolactate synthase ComA K08097 GO:0003674,GO:0003824,GO:0016829,GO:0016830,GO:0016831,GO:0050545 4.4.1.19 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004068 450.0
DYD1_k127_37950_2 COG0494 NTP pyrophosphohydrolases including oxidative damage repair enzymes K01515 - 3.6.1.13 0.000000000000000000000000000000000000000000000000000000000000005695 223.0
DYD1_k127_37950_3 - - - - 0.00000000000000000000000000000000000000000000000000000000139 203.0
DYD1_k127_37950_4 protein conserved in archaea - - - 0.00000000000000000000000007061 115.0
DYD1_k127_38123_0 Involved in the gluconeogenesis. Catalyzes the conversion of oxaloacetate (OAA) to phosphoenolpyruvate (PEP) through direct phosphoryl transfer between the nucleoside triphosphate and OAA K01610 - 4.1.1.49 1.311e-233 733.0
DYD1_k127_38123_1 Sodium hydrogen exchanger - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002504 592.0
DYD1_k127_38123_10 Thiamine-binding protein - - - 0.0000000000000000000000000002309 120.0
DYD1_k127_38123_11 - - - - 0.0000000000000000000000001263 108.0
DYD1_k127_38123_12 - - - - 0.000000000003393 74.0
DYD1_k127_38123_13 Methionine biosynthesis protein MetW K16215 - 2.1.1.243 0.000000002782 67.0
DYD1_k127_38123_2 Protein of unknown function (DUF763) K09003 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002149 567.0
DYD1_k127_38123_3 Involved in targeting and insertion of nascent membrane proteins into the cytoplasmic membrane. Acts as a receptor for the complex formed by the signal recognition particle (SRP) and the ribosome-nascent chain (RNC) K03110 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001638 545.0
DYD1_k127_38123_4 Reversibly catalyzes the transfer of the carbamoyl group from carbamoyl phosphate (CP) to the N(epsilon) atom of ornithine (ORN) to produce L-citrulline K00611,K09065,K13252 - 2.1.3.3,2.1.3.6,2.1.3.9 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003921 358.0
DYD1_k127_38123_5 RNA methylase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004238 337.0
DYD1_k127_38123_6 SNARE associated Golgi protein - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000002426 290.0
DYD1_k127_38123_7 Molecular chaperone capable of stabilizing a range of proteins. Seems to fulfill an ATP-independent, HSP70-like function in archaeal de novo protein folding K04797 - - 0.0000000000000000000000000000000000000000000000000005265 188.0
DYD1_k127_38123_8 Rieske 2Fe-2S K05710 - - 0.000000000000000000000000000000000000000000000000003112 182.0
DYD1_k127_38123_9 - - - - 0.00000000000000000000000000000000000000000000002075 170.0
DYD1_k127_3820860_0 Fumarase C C-terminus K01744 - 4.3.1.1 1.337e-240 749.0
DYD1_k127_3820860_1 D-isomer specific 2-hydroxyacid dehydrogenase K00058 - 1.1.1.399,1.1.1.95 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008154 544.0
DYD1_k127_3820860_2 Major Facilitator Superfamily - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006291 480.0
DYD1_k127_3820860_3 Ribosomal protein L15E K02877 - - 0.00000000000000000000000000000000000000000000000000000000000000000000002884 242.0
DYD1_k127_3820860_4 Rhodanese Homology Domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000002306 244.0
DYD1_k127_3820860_6 - - - - 0.0002773 49.0
DYD1_k127_3821099_0 FAD linked - - - 2.244e-207 655.0
DYD1_k127_3821099_1 Binds and transfers iron-sulfur (Fe-S) clusters to target apoproteins. Can hydrolyze ATP K03593 - - 8.694e-201 629.0
DYD1_k127_3821099_11 - - - - 0.00001672 54.0
DYD1_k127_3821099_2 Stabilizes TBP binding to an archaeal box-A promoter. Also responsible for recruiting RNA polymerase II to the pre- initiation complex (DNA-TBP-TFIIB) K03124 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000608 271.0
DYD1_k127_3821099_3 Belongs to the UPF0218 family K09735 - - 0.0000000000000000000000000000000000000000000000000000000000134 210.0
DYD1_k127_3821099_4 Glyoxalase bleomycin resistance protein dioxygenase K06996 - - 0.0000000000000000000000000000000000000000000000000000001213 196.0
DYD1_k127_3821099_5 - - - - 0.0000000000000000000000000000000000000005198 149.0
DYD1_k127_3821099_6 - - - - 0.00000000000000000000000000000007777 125.0
DYD1_k127_3821099_8 - - - - 0.0000000006081 67.0
DYD1_k127_3821099_9 Methyltransferase type 11 - - - 0.0000000008438 61.0
DYD1_k127_3823100_0 MGS-like domain K01955 - 6.3.5.5 0.0 1759.0
DYD1_k127_3823100_1 TIGRFAM acetolactate synthase, large subunit, biosynthetic type K01652 - 2.2.1.6 0.0 1025.0
DYD1_k127_3823100_10 Transcriptional regulator K07108 - - 0.000000000000000000000000000000000000000000000000000000000000000000000002789 245.0
DYD1_k127_3823100_11 SnoaL-like domain - - - 0.000000000000000000000000000000000000000000000000002921 184.0
DYD1_k127_3823100_12 DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates K03014 - - 0.0000000000000000000000000000000000000000000001638 172.0
DYD1_k127_3823100_13 Cyclophilin-like K09143 - - 0.0000000000000000000000000000000000000000000191 164.0
DYD1_k127_3823100_14 DNA ligase that seals nicks in double-stranded DNA during DNA replication, DNA recombination and DNA repair K10747 - 6.5.1.1,6.5.1.6,6.5.1.7 0.00000000000000000000000000000000000000000006293 162.0
DYD1_k127_3823100_15 CRISPR (clustered regularly interspaced short palindromic repeat), is an adaptive immune system that provides protection against mobile genetic elements (viruses, transposable elements and conjugative plasmids). CRISPR clusters contain spacers, sequences complementary to antecedent mobile elements, and target invading nucleic acids. CRISPR clusters are transcribed and processed into CRISPR RNA (crRNA). Acts as a dsDNA endonuclease. Involved in the integration of spacer DNA into the CRISPR cassette K15342 - - 0.0000000000000000000000000000000000000000126 157.0
DYD1_k127_3823100_16 S25 ribosomal protein K02975 - - 0.000000000000000000000000000000003239 131.0
DYD1_k127_3823100_17 restriction endonuclease K07448 - - 0.00000000000000000000000001078 116.0
DYD1_k127_3823100_19 Transcriptional regulator - - - 0.0000000000000007041 80.0
DYD1_k127_3823100_2 Belongs to the alpha-IPM synthase homocitrate synthase family K01649 - 2.3.3.13 1.951e-270 839.0
DYD1_k127_3823100_21 PFAM PEGA domain - - - 0.00006316 54.0
DYD1_k127_3823100_3 carbamoyl-phosphate synthase, small subunit K01956 - 6.3.5.5 2.532e-217 679.0
DYD1_k127_3823100_4 Glucose dehydrogenase C-terminus K00008 - 1.1.1.14 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002639 575.0
DYD1_k127_3823100_5 Isocitrate isopropylmalate dehydrogenase K00052 - 1.1.1.85 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001205 572.0
DYD1_k127_3823100_6 Transcriptional regulator - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006177 488.0
DYD1_k127_3823100_7 DeoC/LacD family aldolase K08321 - 2.3.1.245 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005425 481.0
DYD1_k127_3823100_8 Protein of unknown function (DUF541) K09807 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003199 319.0
DYD1_k127_3823100_9 acetolactate synthase, small K01653 - 2.2.1.6 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000005734 288.0
DYD1_k127_3845071_0 Fibronectin-binding protein A N-terminus (FbpA) - - - 1.403e-321 994.0
DYD1_k127_3845071_1 Produces ATP from ADP in the presence of a proton gradient across the membrane. The archaeal alpha chain is a catalytic subunit K02117 - 3.6.3.14,3.6.3.15 5.845e-309 955.0
DYD1_k127_3845071_10 COG0330 Membrane protease subunits stomatin prohibitin homologs - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007044 428.0
DYD1_k127_3845071_11 cytochrome c biogenesis protein K06196 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001868 405.0
DYD1_k127_3845071_12 Produces ATP from ADP in the presence of a proton gradient across the membrane K02120 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003264 358.0
DYD1_k127_3845071_13 CBS domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004054 317.0
DYD1_k127_3845071_14 Involved in allosteric regulation of aspartate carbamoyltransferase K00610 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000152 281.0
DYD1_k127_3845071_15 Produces ATP from ADP in the presence of a proton gradient across the membrane K02121 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000008329 284.0
DYD1_k127_3845071_16 - - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000123 254.0
DYD1_k127_3845071_17 Exonuclease - - - 0.00000000000000000000000000000000000000000000000000000000000000000000005248 244.0
DYD1_k127_3845071_18 PFAM Like-Sm ribonucleoprotein, core - - - 0.0000000000000000000000000000000000000000000000000000000000000000000001691 240.0
DYD1_k127_3845071_19 zinc-ribbon domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000418 230.0
DYD1_k127_3845071_2 Belongs to the V-ATPase 116 kDa subunit family K02123 - - 3.13e-278 871.0
DYD1_k127_3845071_20 Broad-specificity nucleoside monophosphate (NMP) kinase that catalyzes the reversible transfer of the terminal phosphate group between nucleoside triphosphates and monophosphates K18532 - 2.7.4.3 0.00000000000000000000000000000000000000000000000000000000000000002088 229.0
DYD1_k127_3845071_21 NADH ubiquinone oxidoreductase - - - 0.000000000000000000000000000000000000000000000000000000000000000492 218.0
DYD1_k127_3845071_22 DNA repair enzyme involved in the repair of deaminated bases. Selectively cleaves double-stranded DNA at the second phosphodiester bond 3' to a deoxyinosine leaving behind the intact lesion on the nicked DNA K05982 GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0044424,GO:0044464 3.1.21.7 0.0000000000000000000000000000000000000000000000000000000000002161 217.0
DYD1_k127_3845071_23 - - - - 0.00000000000000000000000000000000000000000000000000000000003753 209.0
DYD1_k127_3845071_24 Mut7-C RNAse domain K09122 - - 0.000000000000000000000000000000000000000000000000000006055 196.0
DYD1_k127_3845071_25 Bacterial regulatory protein, arsR family - - - 0.0000000000000000000000000000000000000000000000008961 175.0
DYD1_k127_3845071_26 Catalyzes the methylation of C-15 in cobalt-precorrin-6B followed by the decarboxylation of C-12 to form cobalt-precorrin- 7 K00595,K02006,K02191 - 2.1.1.132,2.1.1.196 0.0000000000000000000000000000000000000000000003631 173.0
DYD1_k127_3845071_28 - - - - 0.0000000000000000000000000000000000000006756 149.0
DYD1_k127_3845071_3 Produces ATP from ADP in the presence of a proton gradient across the membrane. The archaeal beta chain is a regulatory subunit K02118 - - 1.236e-273 844.0
DYD1_k127_3845071_30 - - - - 0.0000000000000000000000000002965 116.0
DYD1_k127_3845071_31 ATP synthase subunit C K02124 - - 0.0000000000000000000000001022 110.0
DYD1_k127_3845071_32 - - - - 0.0000000000000000002914 90.0
DYD1_k127_3845071_33 - - - - 0.00000000000000004548 82.0
DYD1_k127_3845071_35 - - - - 0.000000000000002742 78.0
DYD1_k127_3845071_37 - - - - 0.00000003189 58.0
DYD1_k127_3845071_4 Exchanges the guanine residue with 7-cyano-7- deazaguanine (preQ0) at position 15 in the dihydrouridine loop (D- loop) of archaeal tRNAs K18779 - 2.4.2.48 6.093e-253 787.0
DYD1_k127_3845071_5 DEAD DEAH box helicase K05592 - 3.6.4.13 7.325e-216 677.0
DYD1_k127_3845071_6 Membrane-bound serine protease (ClpP class) K07403 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004506 589.0
DYD1_k127_3845071_7 AhpC/TSA family - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001286 523.0
DYD1_k127_3845071_8 ATP synthase (C/AC39) subunit K02119 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001674 485.0
DYD1_k127_3845071_9 methylase K00571 - 2.1.1.72 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002243 433.0
DYD1_k127_3864011_0 antibiotic catabolic process K18235 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006666 603.0
DYD1_k127_3864011_1 cation diffusion facilitator family transporter - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002069 400.0
DYD1_k127_3864011_2 EamA-like transporter family - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002121 378.0
DYD1_k127_3864011_3 Belongs to the phosphoglycerate kinase family K00927 - 2.7.2.3 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001525 371.0
DYD1_k127_3864011_4 Peptidyl-tRNA hydrolase PTH2 K04794 - 3.1.1.29 0.0000000000000000000000000000000000000000000000000000001586 196.0
DYD1_k127_3864011_5 Is involved in the reduction of 2,3- digeranylgeranylglycerophospholipids (unsaturated archaeols) into 2,3-diphytanylglycerophospholipids (saturated archaeols) in the biosynthesis of archaeal membrane lipids. Catalyzes the formation of archaetidic acid (2,3-di-O-phytanyl-sn-glyceryl phosphate) from 2,3-di-O-geranylgeranylglyceryl phosphate (DGGGP) via the hydrogenation of each double bond of the isoprenoid chains - - - 0.0000000000000000000000000000000000000000000003058 185.0
DYD1_k127_3864011_6 Domain of unknown function (DUF929) - - - 0.00000000001335 64.0
DYD1_k127_3877637_0 Domain of unknown function (DUF929) - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004335 329.0
DYD1_k127_3877637_1 ribosomal protein K02866 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000002937 297.0
DYD1_k127_3877637_2 tRNA intron endonuclease, N-terminal domain K01170 - 4.6.1.16 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000001073 288.0
DYD1_k127_3877637_3 COG4618 ABC-type protease lipase transport system, ATPase and permease components - - - 0.0000000000000000000000000000000000000000000004291 169.0
DYD1_k127_3877637_5 - - - - 0.00000000000000000002897 91.0
DYD1_k127_4087683_0 methylase K00590 - 2.1.1.113 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002168 600.0
DYD1_k127_4087683_1 Phosphate uptake regulator - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006682 554.0
DYD1_k127_4087683_2 Catalyzes the dephosphorylation of undecaprenyl diphosphate (UPP). Confers resistance to bacitracin K06153 - 3.6.1.27 0.0000000000000000000000000000000000000000000000000222 188.0
DYD1_k127_4087683_3 PhoU domain K02039 - - 0.0000000000000000001233 88.0
DYD1_k127_4087683_4 Catalyzes the synthesis of activated sulfate K00860 - 2.7.1.25 0.00000000000008637 76.0
DYD1_k127_4087683_5 - - - - 0.0005371 47.0
DYD1_k127_4108680_0 resistance protein K14166 - - 0.0 1133.0
DYD1_k127_4108680_1 Winged helix-turn-helix DNA-binding - - - 0.0000000000000000000000000000000000000000000000000000000000000000009552 232.0
DYD1_k127_4108680_2 - - - - 0.00000000000000000000000000000000000000000000000004667 183.0
DYD1_k127_4108680_3 - - - - 0.0000000000000000000000000000000000000000000001852 176.0
DYD1_k127_4108680_4 - - - - 0.0000000000000000000000000000000000000000001042 167.0
DYD1_k127_4108680_5 serine-type endopeptidase activity - - - 0.0000000000000000000000000000000000000006177 154.0
DYD1_k127_4108680_6 - - - - 0.0000000000000000000000000000000000305 138.0
DYD1_k127_4110095_0 Radical SAM - - - 0.0 1022.0
DYD1_k127_4110095_1 Catalyzes the attachment of glutamate to tRNA(Glu) in a two-step reaction glutamate is first activated by ATP to form Glu-AMP and then transferred to the acceptor end of tRNA(Glu) K01885 - 6.1.1.17 3.292e-292 905.0
DYD1_k127_4110095_10 Belongs to the MenA family. Type 1 subfamily - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003781 308.0
DYD1_k127_4110095_11 Required for the formation of a threonylcarbamoyl group on adenosine at position 37 (t(6)A37) in tRNAs that read codons beginning with adenine. Is a component of the KEOPS complex that is probably involved in the transfer of the threonylcarbamoyl moiety of threonylcarbamoyl-AMP (TC-AMP) to the N6 group of A37. The Kae1 domain likely plays a direct catalytic role in this reaction. The Bud32 domain probably displays kinase activity that regulates Kae1 function - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000006201 278.0
DYD1_k127_4110095_12 - - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000001218 251.0
DYD1_k127_4110095_13 Methyltransferase K03183 - 2.1.1.163,2.1.1.201 0.00000000000000000000000000000000000000000000000000000000000000000000008056 246.0
DYD1_k127_4110095_14 COG0494 NTP pyrophosphohydrolases including oxidative damage repair enzymes K21929 - 3.2.2.27 0.0000000000000000000000000000000000000000000000000000000000000007434 221.0
DYD1_k127_4110095_16 - - - - 0.00000000000000000000000000000000000000000000000002218 182.0
DYD1_k127_4110095_17 - - - - 0.0000000000000000000000000000000005535 132.0
DYD1_k127_4110095_19 4-hydroxybenzoate synthetase (chorismate lyase) K03181,K06984 - 2.4.2.54,4.1.3.40 0.0000000000000000000000000000001314 130.0
DYD1_k127_4110095_2 Involved in the biosynthesis of isoprenoids. Catalyzes the 1,3-allylic rearrangement of the homoallylic substrate isopentenyl (IPP) to its allylic isomer, dimethylallyl diphosphate (DMAPP) K01823 - 5.3.3.2 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009038 596.0
DYD1_k127_4110095_3 TPR repeat - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002046 561.0
DYD1_k127_4110095_4 oxidoreductase FAD NAD(P)-binding K00528 - 1.18.1.2,1.19.1.1 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007191 526.0
DYD1_k127_4110095_5 Belongs to the FPP GGPP synthase family K13787 - 2.5.1.1,2.5.1.10,2.5.1.29 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009733 497.0
DYD1_k127_4110095_6 2-keto-4-pentenoate hydratase 2-oxohepta-3-ene-1,7-dioic acid hydratase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001093 494.0
DYD1_k127_4110095_7 Myo-inositol-1-phosphate synthase K01858 - 5.5.1.4 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003102 478.0
DYD1_k127_4110095_8 archaeal coiled-coil protein - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001771 429.0
DYD1_k127_4110095_9 Amino acid kinase family K06981 - 2.7.4.26 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000228 369.0
DYD1_k127_420263_0 Formyl transferase K01433 - 3.5.1.10 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002376 477.0
DYD1_k127_420263_1 Catalyzes the oxidation of 5,10- methylenetetrahydrofolate to 5,10-methenyltetrahydrofolate and then the hydrolysis of 5,10-methenyltetrahydrofolate to 10- formyltetrahydrofolate K01491 - 1.5.1.5,3.5.4.9 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006587 454.0
DYD1_k127_420263_2 Creatinine amidohydrolase K01470 - 3.5.2.10 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000662 333.0
DYD1_k127_420263_3 - - - - 0.000000000000000000000000000000000000000000000000000009413 195.0
DYD1_k127_420263_4 snRNP Sm proteins K04796 - - 0.000000000000000000000000000000000000001001 149.0
DYD1_k127_420263_5 Binds to the 23S rRNA K02922 - - 0.00000000000000000000000002799 108.0
DYD1_k127_420263_6 Transcriptional regulator - - - 0.00000000001528 72.0
DYD1_k127_4229858_0 HMGL-like K01649 - 2.3.3.13 1.112e-214 669.0
DYD1_k127_4229858_1 Lysine biosynthesis K05827 - 6.3.2.43 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001823 463.0
DYD1_k127_4229858_2 lysine biosynthesis protein LysW K05826 - - 0.0000000000000000000000003727 104.0
DYD1_k127_4229858_3 Catalyzes the release of L-lysine from LysW -gamma-L- lysine and the release of L-ornithine from LysW -L-ornithine K05831 - - 0.0000001691 52.0
DYD1_k127_4267667_0 Large family of predicted nucleotide-binding domains K06865 - - 7.874e-316 974.0
DYD1_k127_4267667_1 Protein of unknown function (DUF1512) - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001119 578.0
DYD1_k127_4267667_10 iron dependent repressor - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000664 259.0
DYD1_k127_4267667_11 - - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000124 255.0
DYD1_k127_4267667_12 Hexapeptide repeat of succinyl-transferase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000001419 245.0
DYD1_k127_4267667_13 Belongs to the P(II) protein family K04751 - - 0.0000000000000000000000000000000000000000000000000000001091 197.0
DYD1_k127_4267667_14 - - - - 0.0000000000000000000000000000000000000000000000000009464 187.0
DYD1_k127_4267667_15 Binds double-stranded DNA tightly but without sequence specificity. It is distributed uniformly and abundantly on the chromosome, suggesting a role in chromatin architecture. However, it does not significantly compact DNA. Binds rRNA and mRNA in vivo. May play a role in maintaining the structural and functional stability of RNA, and, perhaps, ribosomes K03622 - - 0.00000000000000000000000000000000000000000000000008647 179.0
DYD1_k127_4267667_16 Trm112p-like protein - - - 0.0000000000000000000000000000000000000111 146.0
DYD1_k127_4267667_17 metalloendopeptidase activity - - - 0.00000000000000000000004415 100.0
DYD1_k127_4267667_2 Methyltransferase domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006445 543.0
DYD1_k127_4267667_3 Belongs to the class-IV pyridoxal-phosphate-dependent aminotransferase family K00826 - 2.6.1.42 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001105 512.0
DYD1_k127_4267667_4 Removes the N-terminal methionine from nascent proteins. The N-terminal methionine is often cleaved when the second residue in the primary sequence is small and uncharged (Met-Ala-, Cys, Gly, Pro, Ser, Thr, or Val) K01265 - 3.4.11.18 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001632 488.0
DYD1_k127_4267667_5 Oxidoreductase family, NAD-binding Rossmann fold K18855 - 1.1.1.374 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003904 463.0
DYD1_k127_4267667_6 D-isomer specific 2-hydroxyacid dehydrogenase K00015 - 1.1.1.26 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001409 448.0
DYD1_k127_4267667_7 Rhodanese Homology Domain K01011 - 2.8.1.1,2.8.1.2 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001053 409.0
DYD1_k127_4267667_8 Nicotinamide-nucleotide adenylyltransferase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000001096 297.0
DYD1_k127_4267667_9 Peptidase M10A and M12B matrixin and adamalysin - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000001612 277.0
DYD1_k127_436302_0 Belongs to the aspartokinase family K00928 - 2.7.2.4 4.903e-254 788.0
DYD1_k127_436302_1 Radical SAM K04069 - 1.97.1.4 1.051e-202 634.0
DYD1_k127_436302_2 Tetrapyrrole (Corrin/Porphyrin) Methylases K05934 - 2.1.1.131 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004216 480.0
DYD1_k127_436302_3 Sliding clamp subunit that acts as a moving platform for DNA processing. Responsible for tethering the catalytic subunit of DNA polymerase and other proteins to DNA during high-speed replication K04802 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005963 443.0
DYD1_k127_436302_4 Monooxygenase subunit B protein K10945 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002746 327.0
DYD1_k127_436302_5 - - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000188 282.0
DYD1_k127_436302_6 Belongs to the archaeal rpoM eukaryotic RPA12 RPB9 RPC11 RNA polymerase family K03057 - - 0.0000000000000000000000000000000000009834 144.0
DYD1_k127_436302_7 RNA polymerase Rpb3/Rpb11 dimerisation domain K03056 - 2.7.7.6 0.00000000000000000000000000000002769 127.0
DYD1_k127_4383465_0 Phosphate uptake regulator - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002971 492.0
DYD1_k127_4383465_1 Belongs to the MEMO1 family K06990 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007503 409.0
DYD1_k127_4383465_2 kinase, sugar kinase superfamily K06982 - 2.7.1.169 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000001331 282.0
DYD1_k127_4383465_3 Catalyzes the phosphorylation of (R)-mevalonate (MVA) to (R)-mevalonate 5-phosphate (MVAP). Functions in the mevalonate (MVA) pathway leading to isopentenyl diphosphate (IPP), a key precursor for the biosynthesis of isoprenoid compounds such as archaeal membrane lipids K00869 - 2.7.1.36 0.000000000000000000000000000000000000000000000000000000000000000001426 241.0
DYD1_k127_4387979_0 TIGRFAM glutamine synthetase, type I K01915 GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0044424,GO:0044464 6.3.1.2 2.221e-214 674.0
DYD1_k127_4387979_1 Stabilizes TBP binding to an archaeal box-A promoter. Also responsible for recruiting RNA polymerase II to the pre- initiation complex (DNA-TBP-TFIIB) K03124 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000001216 288.0
DYD1_k127_4387979_2 helix_turn_helix ASNC type - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000006458 261.0
DYD1_k127_4387979_4 COG0265 Trypsin-like serine proteases, typically periplasmic, contain C-terminal PDZ domain - - - 0.0000000000000000000000001282 111.0
DYD1_k127_4387979_5 factor TFIIB K03124 - - 0.00000000000000000000021 99.0
DYD1_k127_4405590_0 Haloacid dehalogenase-like hydrolase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009372 391.0
DYD1_k127_4405590_1 HxlR-like helix-turn-helix - - - 0.0000000000000000000000000000003087 125.0
DYD1_k127_4405590_2 peroxiredoxin activity - - - 0.0000000000000000000000000000008651 125.0
DYD1_k127_4409316_0 Carbamoyl-phosphate synthase L chain K18603 - 6.4.1.2,6.4.1.3 1.894e-286 885.0
DYD1_k127_4409316_1 Acetyl-CoA carboxylase, carboxyltransferase component (subunits alpha and beta) K18604 - 2.1.3.15,6.4.1.2,6.4.1.3 2.925e-235 737.0
DYD1_k127_4409316_10 - - - - 0.000000000000000000000000000000000002818 144.0
DYD1_k127_4409316_11 - K03646 - - 0.000000000000000000006285 93.0
DYD1_k127_4409316_2 - - - - 6.945e-205 642.0
DYD1_k127_4409316_3 Cysteine desulfurase K04487 - 2.8.1.7 2.711e-200 629.0
DYD1_k127_4409316_4 ATPase family associated with various cellular activities (AAA) K04800 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001701 589.0
DYD1_k127_4409316_5 tRNA methyl transferase K06864 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000381 419.0
DYD1_k127_4409316_6 biotin carboxyl carrier K00627,K01571,K15037,K18605 - 2.3.1.12,4.1.1.3 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000105 291.0
DYD1_k127_4409316_7 Redoxin K03564 - 1.11.1.15 0.000000000000000000000000000000000000000000000000000000000000000000006466 237.0
DYD1_k127_4409316_8 Protein of unknown function DUF111 K09121 - 4.99.1.12 0.0000000000000000000000000000000000000000000000000000000003934 205.0
DYD1_k127_4409316_9 One of the primary rRNA binding proteins, it binds directly to 16S rRNA where it nucleates assembly of the head domain of the 30S subunit. Is located at the subunit interface close to the decoding center K02992 - - 0.0000000000000000000000000000000000000000000001809 168.0
DYD1_k127_4441562_0 Subtilase family - - - 0.0 1682.0
DYD1_k127_4441562_1 Function in general translation initiation by promoting the binding of the formylmethionine-tRNA to ribosomes. Seems to function along with eIF-2 K03243 - - 0.0 1007.0
DYD1_k127_4441562_10 Thioredoxin K03671 - - 0.00000000000000000000000000000000000000000000000000000000000002406 215.0
DYD1_k127_4441562_11 - - - - 0.0000000000000000000000000000000000000000000000000000000000006382 216.0
DYD1_k127_4441562_12 Lrp/AsnC ligand binding domain - - - 0.000000000000000000000000000000000000000005088 154.0
DYD1_k127_4441562_13 COG1522 Transcriptional regulators - - - 0.000000000000000000000000000000000000179 142.0
DYD1_k127_4441562_14 Binds to the 23S rRNA K02896 - - 0.0000000000000000000000000000000000005281 139.0
DYD1_k127_4441562_15 Belongs to the eukaryotic ribosomal protein eS28 family K02979 - - 0.00000000000000000000000000000002023 126.0
DYD1_k127_4441562_17 Major Facilitator Superfamily - - - 0.0000000000000000000002078 111.0
DYD1_k127_4441562_18 zinc finger - - - 0.0000000000000008464 78.0
DYD1_k127_4441562_19 DNA topoisomerase, type IA, central domain protein K03168,K03169 - 5.99.1.2 0.0006689 46.0
DYD1_k127_4441562_2 PFAM TCP-1 cpn60 chaperonin family K22447 - - 4.572e-307 946.0
DYD1_k127_4441562_3 Belongs to the phosphohexose mutase family K15778 - 5.4.2.2,5.4.2.8 6.488e-231 721.0
DYD1_k127_4441562_4 Aminotransferase class-V K11717 - 2.8.1.7,4.4.1.16 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001621 546.0
DYD1_k127_4441562_5 Transcriptional regulator - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002517 465.0
DYD1_k127_4441562_6 Rhomboid family - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003754 425.0
DYD1_k127_4441562_7 Forms part of the ribosomal stalk which helps the ribosome interact with GTP-bound translation factors K02867 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000001489 290.0
DYD1_k127_4441562_8 Major role in the synthesis of nucleoside triphosphates other than ATP. The ATP gamma phosphate is transferred to the NDP beta phosphate via a ping-pong mechanism, using a phosphorylated active-site intermediate K00940 - 2.7.4.6 0.00000000000000000000000000000000000000000000000000000000000000000000208 236.0
DYD1_k127_4441562_9 Multifunctional RNA-binding protein that recognizes the K-turn motif in ribosomal RNA, the RNA component of RNase P, box H ACA, box C D and box C' D' sRNAs K02936 - - 0.0000000000000000000000000000000000000000000000000000000000000006373 220.0
DYD1_k127_4447255_0 AAA domain K03546 - - 2.479e-248 787.0
DYD1_k127_4447255_1 Calcineurin-like phosphoesterase superfamily domain K03547 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008581 398.0
DYD1_k127_4447255_2 TIGRFAM Mannose-1-phosphate guanylyltransferase mannose-6-phosphate isomerase K00971,K16011 - 2.7.7.13,5.3.1.8 0.000000000000000000000000000000000000000000000000001718 184.0
DYD1_k127_4447255_3 F5/8 type C domain - - - 0.00000000000000001234 92.0
DYD1_k127_4447255_4 Belongs to the peptidase S16 family K06870 GO:0003674,GO:0003824,GO:0004176,GO:0006508,GO:0006515,GO:0006807,GO:0008150,GO:0008152,GO:0008233,GO:0009056,GO:0009057,GO:0009987,GO:0016462,GO:0016787,GO:0016817,GO:0016818,GO:0016887,GO:0017111,GO:0019538,GO:0030163,GO:0042623,GO:0043170,GO:0044237,GO:0044238,GO:0044248,GO:0044257,GO:0044260,GO:0044265,GO:0044267,GO:0051603,GO:0070011,GO:0071704,GO:0140096,GO:1901564,GO:1901565,GO:1901575 - 0.00000000003558 74.0
DYD1_k127_4475257_0 PFAM Aldehyde dehydrogenase K00135 - 1.2.1.16,1.2.1.20,1.2.1.79 4.68e-251 778.0
DYD1_k127_4475257_1 PFAM Alcohol dehydrogenase GroES-like domain K13953 - 1.1.1.1 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003293 574.0
DYD1_k127_4475257_3 Ribosomal protein L15E K02877 - - 0.0000000000000000000000000000000008215 130.0
DYD1_k127_4493621_0 pyruvate flavodoxin ferredoxin oxidoreductase K00174 - 1.2.7.11,1.2.7.3 7.816e-320 991.0
DYD1_k127_4493621_1 TIGRFAM glucosamine--fructose-6-phosphate aminotransferase (isomerizing) K00820 - 2.6.1.16 5.36e-219 694.0
DYD1_k127_4493621_2 TIGRFAM pyruvate ferredoxin flavodoxin oxidoreductase, beta subunit K00175 - 1.2.7.11,1.2.7.3 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002241 391.0
DYD1_k127_4493621_3 Stabilizes TBP binding to an archaeal box-A promoter. Also responsible for recruiting RNA polymerase II to the pre- initiation complex (DNA-TBP-TFIIB) K03124 - - 0.0000000000000000000000000000000000000000000000000000000000008749 221.0
DYD1_k127_4493621_4 COG1522 Transcriptional regulators - - - 0.000000000000000000000000000000003395 128.0
DYD1_k127_4493621_5 Aconitase family (aconitate hydratase) K01681 - 4.2.1.3 0.0000000000000000000000000001804 115.0
DYD1_k127_4526029_0 Belongs to the class-I aminoacyl-tRNA synthetase family K01870 - 6.1.1.5 0.0 1796.0
DYD1_k127_4526029_1 - - - - 0.00000000000000000000000000000000000000000000001218 175.0
DYD1_k127_4789462_0 The UvrABC repair system catalyzes the recognition and processing of DNA lesions. UvrA is an ATPase and a DNA-binding protein. A damage recognition complex composed of 2 UvrA and 2 UvrB subunits scans DNA for abnormalities. When the presence of a lesion has been verified by UvrB, the UvrA molecules dissociate K03701 - - 0.0 1352.0
DYD1_k127_4789462_1 TIGRFAM excinuclease ABC, C subunit K03703 - - 7.506e-253 789.0
DYD1_k127_4789462_10 Transcriptional regulator - - - 0.0000000000000000000000000000000000005506 141.0
DYD1_k127_4789462_13 ligase activity K00666,K03892 - - 0.00008318 53.0
DYD1_k127_4789462_2 Radical SAM K11781 - 2.5.1.77 4.053e-230 716.0
DYD1_k127_4789462_3 Radical SAM K11780 - 2.5.1.77 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001991 589.0
DYD1_k127_4789462_4 Glycosyl transferase family 21 - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001768 569.0
DYD1_k127_4789462_5 PFAM Alanine dehydrogenase PNT K00259,K00324 GO:0000286,GO:0003674,GO:0003824,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006082,GO:0006520,GO:0006522,GO:0006524,GO:0006807,GO:0008150,GO:0008152,GO:0009056,GO:0009063,GO:0009078,GO:0009080,GO:0009987,GO:0016054,GO:0016491,GO:0016638,GO:0019752,GO:0043436,GO:0044237,GO:0044238,GO:0044248,GO:0044281,GO:0044282,GO:0044424,GO:0044444,GO:0044464,GO:0046395,GO:0055114,GO:0071704,GO:1901564,GO:1901565,GO:1901575,GO:1901605,GO:1901606 1.4.1.1,1.6.1.2 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008976 552.0
DYD1_k127_4789462_6 Trypsin-like serine protease with C-terminal PDZ domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003333 499.0
DYD1_k127_4789462_7 Stabilizes TBP binding to an archaeal box-A promoter. Also responsible for recruiting RNA polymerase II to the pre- initiation complex (DNA-TBP-TFIIB) K03124 - - 0.0000000000000000000000000000000000000000000000000000000000245 219.0
DYD1_k127_4789462_8 PFAM Polyketide cyclase dehydrase and lipid transport - - - 0.00000000000000000000000000000000000000000000000000000001091 200.0
DYD1_k127_4789462_9 - - - - 0.0000000000000000000000000000000000000000000007705 181.0
DYD1_k127_480462_0 Initiation factor K03242 - - 9.046e-239 742.0
DYD1_k127_480462_1 Dual specificity phosphatase, catalytic domain K14165 - 3.1.3.16,3.1.3.48 0.0000000000000000000000000000000000000000000000000000000000000000001273 233.0
DYD1_k127_480462_2 - - - - 0.00000000000000000000000000000000000000000000000000000001341 198.0
DYD1_k127_480462_3 Belongs to the eukaryotic ribosomal protein eS6 family K02991 - - 0.00000000000000000000000000000000000000000000000000001556 191.0
DYD1_k127_480462_4 Nucleotide binding protein, PINc K07158 - - 0.000000000000000000000000000000000000000001417 158.0
DYD1_k127_480462_5 - - - - 0.00000000000000000000008126 100.0
DYD1_k127_480462_6 - - - - 0.0000000000000000002075 88.0
DYD1_k127_480462_7 TIGRFAM transposase, IS605 OrfB family K07496 - - 0.000611 46.0
DYD1_k127_4806707_0 HELICc2 - - - 1.153e-249 801.0
DYD1_k127_4806707_1 Oligopeptide/dipeptide transporter, C-terminal region K02031 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005311 505.0
DYD1_k127_4806707_2 - - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000925 472.0
DYD1_k127_4806707_3 Poorly processive, error-prone DNA polymerase involved in untargeted mutagenesis. Copies undamaged DNA at stalled replication forks, which arise in vivo from mismatched or misaligned primer ends. These misaligned primers can be extended by PolIV. Exhibits no 3'-5' exonuclease (proofreading) activity. May be involved in translesional synthesis K04479 - 2.7.7.7 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003872 469.0
DYD1_k127_4806707_4 - - - - 0.00000000000000000000000003852 108.0
DYD1_k127_4806707_5 Response regulator consisting of a CheY-like receiver domain and a Fis-type HTH domain K03413 - - 0.0000000000000008213 82.0
DYD1_k127_4806707_6 Phage integrase family - - - 0.000009437 57.0
DYD1_k127_4993544_0 phosphoglucomutase phosphomannomutase alpha beta alpha domain I - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004473 610.0
DYD1_k127_4993544_1 Belongs to the RtcB family K14415 - 6.5.1.3 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002877 561.0
DYD1_k127_4993544_11 Copper binding proteins, plastocyanin/azurin family - - - 0.00000000000000000021 97.0
DYD1_k127_4993544_2 PFAM Alcohol dehydrogenase K13953 - 1.1.1.1 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001044 405.0
DYD1_k127_4993544_3 Located on the platform of the 30S subunit K02948 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000002113 252.0
DYD1_k127_4993544_4 COG0494 NTP pyrophosphohydrolases including oxidative damage repair enzymes K01515 - 3.6.1.13 0.00000000000000000000000000000000000000000000000000000000000000000003674 238.0
DYD1_k127_4993544_5 - - - - 0.000000000000000000000000000000000000000000000000000000000000000002179 236.0
DYD1_k127_4993544_6 - - - - 0.000000000000000000000000000000000000000004625 156.0
DYD1_k127_4993544_7 Catalyzes the ATP-dependent phosphorylation of thiamine- monophosphate (TMP) to form thiamine-pyrophosphate (TPP), the active form of vitamin B1 K00946 GO:0000166,GO:0003674,GO:0003824,GO:0005488,GO:0005515,GO:0005524,GO:0006725,GO:0006732,GO:0006790,GO:0006793,GO:0006796,GO:0006807,GO:0008144,GO:0008150,GO:0008152,GO:0009030,GO:0009058,GO:0009108,GO:0009229,GO:0009987,GO:0016301,GO:0016310,GO:0016740,GO:0016772,GO:0016776,GO:0017076,GO:0018130,GO:0019438,GO:0019637,GO:0030554,GO:0032553,GO:0032555,GO:0032559,GO:0034641,GO:0035639,GO:0036094,GO:0042357,GO:0042802,GO:0042803,GO:0043167,GO:0043168,GO:0044237,GO:0044249,GO:0044271,GO:0044272,GO:0046483,GO:0046983,GO:0051186,GO:0051188,GO:0071704,GO:0072527,GO:0072528,GO:0090407,GO:0097159,GO:0097367,GO:1901265,GO:1901360,GO:1901362,GO:1901363,GO:1901564,GO:1901566,GO:1901576 2.7.4.16 0.00000000000000000000000000000000008112 146.0
DYD1_k127_4993544_8 Citrate transporter - - - 0.00000000000000000000005336 100.0
DYD1_k127_4993544_9 - - - - 0.0000000000000000000002097 102.0
DYD1_k127_5028701_0 Heat shock 70 kDa protein K04043 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001527 382.0
DYD1_k127_5028701_2 Participates actively in the response to hyperosmotic and heat shock by preventing the aggregation of stress-denatured proteins, in association with DnaK and GrpE. It is the nucleotide exchange factor for DnaK and may function as a thermosensor. Unfolded proteins bind initially to DnaJ K03687 - - 0.000000000000000000000000000000000000000000000000000000000000000001242 232.0
DYD1_k127_5028701_3 Thioredoxin K03671 - - 0.0000000000000000000000000000000000000000000000000000000000004995 214.0
DYD1_k127_5028701_5 Translation initiation factor K03238 - - 0.0000000000000000000000002097 105.0
DYD1_k127_5030258_0 3-isopropylmalate dehydratase, large subunit K01703 - 4.2.1.33,4.2.1.35 1.745e-277 860.0
DYD1_k127_5030258_1 oligoendopeptidase F - - - 2.131e-238 745.0
DYD1_k127_5030258_11 - - - - 0.000000000000000000000001984 107.0
DYD1_k127_5030258_13 Radical SAM K06937 - - 0.000000000000000000001783 93.0
DYD1_k127_5030258_14 response regulator, receiver K07668,K07669 - - 0.000000000000000006154 89.0
DYD1_k127_5030258_2 Catalyzes the formation of phosphoribosylamine from phosphoribosylpyrophosphate (PRPP) and glutamine K00764 - 2.4.2.14 1.383e-234 731.0
DYD1_k127_5030258_3 DEAD DEAH box helicase K05592 - 3.6.4.13 5.002e-203 637.0
DYD1_k127_5030258_4 Component of the proteasome core, a large protease complex with broad specificity involved in protein degradation K03433 - 3.4.25.1 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004463 400.0
DYD1_k127_5030258_5 - - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006403 374.0
DYD1_k127_5030258_6 3-isopropylmalate dehydratase, small subunit K01704 - 4.2.1.33,4.2.1.35 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007062 333.0
DYD1_k127_5030258_7 5' nucleotidase, deoxy (Pyrimidine), cytosolic type C protein (NT5C) K05967 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006075 319.0
DYD1_k127_5030258_8 PFAM Rieske 2Fe-2S domain K00411 - 1.10.2.2 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000009822 302.0
DYD1_k127_5030258_9 regulatory protein, arsR - - - 0.000000000000000000000000000000000000002059 154.0
DYD1_k127_5037519_0 This protein is involved in the repair of mismatches in DNA. It is required for dam-dependent methyl-directed DNA mismatch repair. May act as a molecular matchmaker , a protein that promotes the formation of a stable complex between two or more DNA-binding proteins in an ATP-dependent manner without itself being part of a final effector complex - - - 1.257e-264 824.0
DYD1_k127_5037519_1 Directs the termination of nascent peptide synthesis (translation) in response to the termination codons UAA, UAG and UGA K03265 - - 2.524e-227 708.0
DYD1_k127_5037519_2 homoserine dehydrogenase K00003 - 1.1.1.3 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005622 573.0
DYD1_k127_5037519_3 Mitochondrial biogenesis AIM24 - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002589 384.0
DYD1_k127_5037519_4 Component of the proteasome core, a large protease complex with broad specificity involved in protein degradation K03433 - 3.4.25.1 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003805 347.0
DYD1_k127_5037519_5 Helix-turn-helix XRE-family like proteins - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001743 312.0
DYD1_k127_5037519_6 membrane transporter protein K07090 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000004584 290.0
DYD1_k127_5037519_7 PUA domain K07575 - - 0.00000000000000000000000000000000000000000000000000000000001221 211.0
DYD1_k127_5062571_0 Peptidase family M1 domain K01256,K13722 - 3.4.11.2 0.0 1208.0
DYD1_k127_5062571_1 Acetyl-coenzyme A synthetase N-terminus K01895 - 6.2.1.1 3.61e-208 651.0
DYD1_k127_5062571_2 Acetyltransferase (GNAT) family - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006521 358.0
DYD1_k127_5171030_0 deoxyhypusine monooxygenase activity - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005688 449.0
DYD1_k127_5171030_1 Forms part of the ribosomal stalk, playing a central role in the interaction of the ribosome with GTP-bound translation factors K02864 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000036 418.0
DYD1_k127_5171030_2 PFAM DNA alkylation repair enzyme - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000001993 284.0
DYD1_k127_5171030_3 Seems to be required for maximal rate of protein biosynthesis. Enhances ribosome dissociation into subunits and stabilizes the binding of the initiator Met-tRNA(I) to 40 S ribosomal subunits K03236 - - 0.0000000000000000000000000000000000000000000000002219 179.0
DYD1_k127_5171030_4 Forms part of the ribosomal stalk, playing a central role in the interaction of the ribosome with GTP-bound translation factors K02869 - - 0.00000000000000000000000000000000000000171 149.0
DYD1_k127_5171680_0 PFAM Ppx GppA phosphatase K01524 - 3.6.1.11,3.6.1.40 2.477e-215 678.0
DYD1_k127_5171680_1 Sodium hydrogen exchanger K03455 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005564 534.0
DYD1_k127_5171680_10 TIGRFAM phosphohistidine phosphatase SixA K08296 - - 0.00000000000000000000000000000000000000000000000000000000000008187 217.0
DYD1_k127_5171680_11 Transcriptional regulator - - - 0.00000000000000000000000000000000000000000000000000000000008121 207.0
DYD1_k127_5171680_13 Low molecular weight phosphatase family K03741 - 1.20.4.1 0.0000000000000000000000000000002584 128.0
DYD1_k127_5171680_14 Part of the ABC transporter complex PstSACB involved in phosphate import. Responsible for energy coupling to the transport system K02036 - 3.6.3.27 0.000000000000000000000001634 104.0
DYD1_k127_5171680_17 - - - - 0.00001992 49.0
DYD1_k127_5171680_2 probably responsible for the translocation of the substrate across the membrane K02037 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000025 467.0
DYD1_k127_5171680_3 TIGRFAM phosphate ABC transporter K02038 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001886 445.0
DYD1_k127_5171680_4 thymidylate kinase K00943 - 2.7.4.9 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004111 379.0
DYD1_k127_5171680_5 thymidylate kinase K00943 GO:0003674,GO:0003824,GO:0004798,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006139,GO:0006220,GO:0006221,GO:0006227,GO:0006233,GO:0006235,GO:0006725,GO:0006753,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0009041,GO:0009058,GO:0009117,GO:0009123,GO:0009132,GO:0009133,GO:0009138,GO:0009139,GO:0009141,GO:0009142,GO:0009147,GO:0009148,GO:0009165,GO:0009186,GO:0009189,GO:0009196,GO:0009197,GO:0009200,GO:0009202,GO:0009211,GO:0009212,GO:0009219,GO:0009221,GO:0009262,GO:0009263,GO:0009265,GO:0009394,GO:0009987,GO:0016301,GO:0016310,GO:0016740,GO:0016772,GO:0016776,GO:0018130,GO:0019205,GO:0019438,GO:0019637,GO:0019692,GO:0034641,GO:0034654,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0044424,GO:0044464,GO:0046072,GO:0046075,GO:0046077,GO:0046385,GO:0046483,GO:0046940,GO:0050145,GO:0055086,GO:0071704,GO:0072527,GO:0072528,GO:0090407,GO:1901135,GO:1901137,GO:1901293,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576 2.7.4.9 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004809 373.0
DYD1_k127_5171680_6 TIGRFAM phosphate ABC transporter K02040 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004611 348.0
DYD1_k127_5171680_7 Methyltransferase type 11 K07755 - 2.1.1.137 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005763 305.0
DYD1_k127_5171680_8 Major Intrinsic Protein K06188 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006148 301.0
DYD1_k127_5171680_9 - - - - 0.00000000000000000000000000000000000000000000000000000000000000001569 228.0
DYD1_k127_521061_0 Catalyzes the sequential NAD-dependent oxidations of L- histidinol to L-histidinaldehyde and then to L-histidine K00013 - 1.1.1.23 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007639 595.0
DYD1_k127_521061_1 ATP phosphoribosyltransferase K00765 - 2.4.2.17 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000715 566.0
DYD1_k127_521061_2 Belongs to the HMG-CoA reductase family K00054 - 1.1.1.88 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004087 544.0
DYD1_k127_521061_3 PFAM Aminotransferase class I and II K00817 - 2.6.1.9 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001183 466.0
DYD1_k127_521061_4 Glucose sorbosone - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001377 459.0
DYD1_k127_521061_5 Haloacid dehalogenase-like hydrolase - - - 0.0000000000000000000002633 97.0
DYD1_k127_5283913_0 Protein of unknown function, DUF255 K06888 - - 0.0 1118.0
DYD1_k127_5283913_1 Pyridoxamine 5'-phosphate K07005 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002612 340.0
DYD1_k127_5283913_2 Transcriptional regulator PadR-like family - - - 0.000000000000000000000000000000000000000000000000000000000000003519 220.0
DYD1_k127_5283913_3 - - - - 0.0000000000000000000000000000000000000000002578 162.0
DYD1_k127_5283913_5 Transcriptional regulator - - - 0.0000000000000000000000000003546 116.0
DYD1_k127_5283913_7 - - - - 0.000000000000000002144 85.0
DYD1_k127_5294393_0 Protein of unknown function DUF111 K09121 - 4.99.1.12 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000256 564.0
DYD1_k127_5294393_1 Belongs to the LDH MDH superfamily K00024 - 1.1.1.37 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000242 535.0
DYD1_k127_5294393_2 Cysteine desulfurase K04487 - 2.8.1.7 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002571 423.0
DYD1_k127_5294393_3 tRNA methyl transferase K06864 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009806 418.0
DYD1_k127_5294393_4 Belongs to the universal ribosomal protein uS5 family K02988 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005204 378.0
DYD1_k127_5294393_5 AIR carboxylase K06898 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008455 360.0
DYD1_k127_5294393_6 This is one of the proteins that binds and probably mediates the attachment of the 5S RNA into the large ribosomal subunit, where it forms part of the central protuberance K02881 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000333 317.0
DYD1_k127_5294393_7 - - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000006428 256.0
DYD1_k127_5294393_8 ribosomal protein K02907 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000009995 256.0
DYD1_k127_5294393_9 Cysteine desulfurase K04487 - 2.8.1.7 0.00000000000000000000000000000000000000000003731 161.0
DYD1_k127_5376638_0 Belongs to the IlvD Edd family K01687 - 4.2.1.9 2.711e-318 979.0
DYD1_k127_5376638_1 Catalyzes the gamma-elimination of phosphate from L- phosphohomoserine and the beta-addition of water to produce L- threonine K01733 - 4.2.3.1 7.914e-270 833.0
DYD1_k127_5376638_10 Catalyzes a mechanistically unusual reaction, the ATP- dependent insertion of CO2 between the N7 and N8 nitrogen atoms of 7,8-diaminopelargonic acid (DAPA) to form an ureido ring K01935 - 6.3.3.3 0.000000000000000000000000000000000000000000000000000000000000000000000000007915 262.0
DYD1_k127_5376638_11 - - - - 0.0000000000000000000000000000000000000000000000000000000000000000000001265 241.0
DYD1_k127_5376638_12 Catalyzes the conversion of dethiobiotin (DTB) to biotin by the insertion of a sulfur atom into dethiobiotin via a radical- based mechanism K01012,K16180 - 2.8.1.6,5.4.99.58 0.00000000000000000000000000000000000000000000000000000000000002093 226.0
DYD1_k127_5376638_13 - - - - 0.0000000000000000000000000000000000000000000000000000008693 196.0
DYD1_k127_5376638_14 - - - - 0.00000000000000000000000000000000000000000000000004819 179.0
DYD1_k127_5376638_15 - - - - 0.00000000000000000000000000000000000000000000005686 172.0
DYD1_k127_5376638_16 - - - - 0.00000000000000000000000000000000000000007036 152.0
DYD1_k127_5376638_17 nucleic-acid-binding protein containing a Zn-ribbon K07068 - - 0.0000000000000000000000000000000000109 138.0
DYD1_k127_5376638_2 Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family K00833 - 2.6.1.62 2.302e-226 707.0
DYD1_k127_5376638_3 component I K01657 - 4.1.3.27 5.248e-223 698.0
DYD1_k127_5376638_4 8-amino-7-oxononanoate synthase K00639 - 2.3.1.29 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001404 563.0
DYD1_k127_5376638_5 Thiolase, N-terminal domain K00626 - 2.3.1.9 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003594 532.0
DYD1_k127_5376638_6 Luciferase-like monooxygenase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000632 474.0
DYD1_k127_5376638_7 Nucleotidyl transferase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007626 355.0
DYD1_k127_5376638_8 conserved protein implicated in secretion - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007827 349.0
DYD1_k127_5376638_9 resolvase K14060 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001129 329.0
DYD1_k127_55370_0 restriction endonuclease K03546,K06915,K07448 - - 0.0 1195.0
DYD1_k127_55370_1 Aldehyde dehydrogenase family K00294 - 1.2.1.88 8.543e-274 848.0
DYD1_k127_55370_16 COG1522 Transcriptional regulators - - - 0.0000000000002219 72.0
DYD1_k127_55370_19 Carboxypeptidase regulatory-like domain - - - 0.00001301 58.0
DYD1_k127_55370_2 Amidohydrolase family - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001349 547.0
DYD1_k127_55370_3 GTPase that associates with the 50S ribosomal subunit and may have a role during protein synthesis or ribosome biogenesis K03665,K06883 GO:0003674,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0043021,GO:0043022,GO:0044424,GO:0044464,GO:0044877 - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002165 519.0
DYD1_k127_55370_4 Stabilizes TBP binding to an archaeal box-A promoter. Also responsible for recruiting RNA polymerase II to the pre- initiation complex (DNA-TBP-TFIIB) K03124 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001463 376.0
DYD1_k127_55370_5 Catalyzes the conversion of D-ribulose 5-phosphate to formate and 3,4-dihydroxy-2-butanone 4-phosphate K02858 - 4.1.99.12 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002988 362.0
DYD1_k127_55370_6 RibD C-terminal domain K14654 - 1.1.1.302 0.00000000000000000000000000000000000000000000000000000000000000000000000002802 257.0
DYD1_k127_55370_7 Catalyzes the formation of 2-amino-5-formylamino-6- ribofuranosylamino-4(3H)-pyrimidinone ribonucleotide monophosphate and inorganic phosphate from GTP. Also has an independent pyrophosphate phosphohydrolase activity K08096 - 3.5.4.29 0.00000000000000000000000000000000000000000000000000000000000000000000006825 247.0
DYD1_k127_55370_9 Catalyzes the formation of 6,7-dimethyl-8- ribityllumazine by condensation of 5-amino-6-(D- ribitylamino)uracil with 3,4-dihydroxy-2-butanone 4-phosphate. This is the penultimate step in the biosynthesis of riboflavin K00794 GO:0000906,GO:0003674,GO:0003824,GO:0005575,GO:0005622,GO:0005623,GO:0006766,GO:0006767,GO:0006771,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009110,GO:0009231,GO:0009987,GO:0016740,GO:0016765,GO:0017144,GO:0018130,GO:0034641,GO:0042364,GO:0042726,GO:0042727,GO:0044237,GO:0044249,GO:0044271,GO:0044281,GO:0044283,GO:0044464,GO:0046483,GO:0071704,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576 2.5.1.78 0.000000000000000000000000000000000000000005609 159.0
DYD1_k127_5547306_0 Radical SAM K06937 - - 0.0 1129.0
DYD1_k127_5547306_1 3-hydroxyacyl-CoA dehydrogenase K00074 - 1.1.1.157 3.491e-198 623.0
DYD1_k127_5547306_2 May function in recognizing stalled ribosomes, interact with stem-loop structures in stalled mRNA molecules, and effect endonucleolytic cleavage of the mRNA. May play a role in the release non-functional ribosomes and degradation of damaged mRNAs. Has endoribonuclease activity K06965 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000306 520.0
DYD1_k127_5547306_3 Protein of unknown function (DUF354) K09726 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004248 449.0
DYD1_k127_5547306_4 Archaeal transcriptional regulator TrmB - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004999 366.0
DYD1_k127_5547306_5 PFAM Iron dependent repressor, metal binding and dimerisation domain K03709 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000003925 274.0
DYD1_k127_5547306_6 - - - - 0.000000000000000000000000000000000000000000000000296 181.0
DYD1_k127_5547306_7 - - - - 0.00000000000000000000001827 104.0
DYD1_k127_5547306_8 CutA1 divalent ion tolerance protein K03926 - - 0.0000000000000005399 82.0
DYD1_k127_5580757_0 Ammonium Transporter K03320 - - 1.124e-255 796.0
DYD1_k127_5580757_1 Sodium hydrogen exchanger K03455 - - 3.246e-195 614.0
DYD1_k127_5580757_10 Belongs to the UPF0284 family - - - 0.0000000000001986 71.0
DYD1_k127_5580757_11 8-oxoguanine DNA glycosylase K03660 - 4.2.99.18 0.0000000000174 64.0
DYD1_k127_5580757_2 PFAM TPR repeat-containing protein - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001888 409.0
DYD1_k127_5580757_3 uracil-DNA glycosylase K21929 - 3.2.2.27 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009061 319.0
DYD1_k127_5580757_4 Belongs to the DNA glycosylase MPG family K03652 - 3.2.2.21 0.00000000000000000000000000000000000000000000000000000000000000000001495 238.0
DYD1_k127_5627445_0 Cobalamin synthesis G C-terminus K02189 - 3.7.1.12 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000923 556.0
DYD1_k127_5627445_1 Dolichyl-phosphate-mannose-protein mannosyltransferase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001669 546.0
DYD1_k127_5627445_2 Archaeal TRASH domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000004314 248.0
DYD1_k127_5627445_3 Catalyzes the methylation of C-1 in cobalt-precorrin-5B to form cobalt-precorrin-6A K02188 - 2.1.1.195 0.0000000000000000000000000000000000000000004608 159.0
DYD1_k127_5717133_0 DNA polymerase IV (family X) K02347 - - 5.262e-206 649.0
DYD1_k127_5717133_1 MafB19-like deaminase K01493 - 3.5.4.12 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002039 342.0
DYD1_k127_5763401_0 Belongs to the MCM family K10726 - - 0.0 1190.0
DYD1_k127_5763401_1 DNA-dependent ATPase and 3'-5' DNA helicase that may be involved in repair of stalled replication forks K03726 - - 0.0 1099.0
DYD1_k127_5763401_10 Lamin Tail Domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000002677 252.0
DYD1_k127_5763401_11 Belongs to the P(II) protein family K04751 - - 0.00000000000000000000000000000000000000000000002617 172.0
DYD1_k127_5763401_12 Belongs to the class-I aminoacyl-tRNA synthetase family - - - 0.0000000000000000000000000000000000000000001259 160.0
DYD1_k127_5763401_13 response to abiotic stimulus K01011,K06867 - 2.8.1.1,2.8.1.2 0.0000000000000001611 83.0
DYD1_k127_5763401_15 Transcriptional regulator - - - 0.00000000000007929 75.0
DYD1_k127_5763401_17 Catalyzes the hydrolysis of inorganic pyrophosphate (PPi) forming two phosphate ions K01507 - 3.6.1.1 0.000006978 48.0
DYD1_k127_5763401_2 High-affinity Fe2 Pb2 permease K07243 - - 8.503e-304 949.0
DYD1_k127_5763401_3 COG0433 Predicted ATPase K06915 - - 1.814e-258 802.0
DYD1_k127_5763401_4 4Fe-4S single cluster domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006885 589.0
DYD1_k127_5763401_5 Replication factor C K04801 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007167 500.0
DYD1_k127_5763401_6 Metal-dependent hydrolases of the beta-lactamase superfamily I K07577 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001222 476.0
DYD1_k127_5763401_7 glycosyl transferase family K01001 - 2.7.8.15 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002274 452.0
DYD1_k127_5763401_8 VIT family - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007481 400.0
DYD1_k127_5763401_9 PFAM NurA domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000001122 271.0
DYD1_k127_578293_0 Putative cyclase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000003997 289.0
DYD1_k127_578293_1 DNA repair enzyme that has both DNA N-glycosylase activity and AP-lyase activity. The DNA N-glycosylase activity releases various damaged pyrimidines from DNA by cleaving the N- glycosidic bond, leaving an AP (apurinic apyrimidinic) site. The AP-lyase activity cleaves the phosphodiester bond 3' to the AP site by a beta-elimination, leaving a 3'-terminal unsaturated sugar and a product with a terminal 5'-phosphate K10773 - 4.2.99.18 0.000000000000000000000000000000000000000000000000000000000000000006929 231.0
DYD1_k127_578293_2 Histidine kinase - - - 0.0000000000000000000000000000000004822 137.0
DYD1_k127_578293_3 Lrp/AsnC ligand binding domain - - - 0.00000000000000000000000000000007675 124.0
DYD1_k127_578293_5 Methyltransferase - - - 0.00004291 52.0
DYD1_k127_5873652_0 TIGRFAM 2-methylcitrate synthase citrate synthase II K01647 - 2.3.3.1 7.366e-223 694.0
DYD1_k127_5873652_1 Phosphoribosylformylglycinamidine cyclo-ligase K01933 - 6.3.3.1 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007374 556.0
DYD1_k127_5873652_2 malic enzyme K00027,K00029 - 1.1.1.38,1.1.1.40 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003632 401.0
DYD1_k127_5873652_3 - - - - 0.00000000000000000000005779 100.0
DYD1_k127_5873652_4 - - - - 0.000001036 51.0
DYD1_k127_5874116_0 aspartate-semialdehyde dehydrogenase K00133 - 1.2.1.11 2.672e-200 627.0
DYD1_k127_5874116_1 Converts cobyric acid to cobinamide by the addition of aminopropanol on the F carboxylic group K02227 - 6.3.1.10 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001894 492.0
DYD1_k127_5874116_2 PFAM Aminotransferase class I and II K04720 - 4.1.1.81 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002913 475.0
DYD1_k127_5874116_3 Catalyzes amidations at positions B, D, E, and G on adenosylcobyrinic A,C-diamide. NH(2) groups are provided by glutamine, and one molecule of ATP is hydrogenolyzed for each amidation K02232 - 6.3.5.10 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001951 421.0
DYD1_k127_5874116_4 MobA-like NTP transferase domain K19712 - 2.7.7.62 0.0000000000000000000000000000000000000000000000001973 186.0
DYD1_k127_5874116_5 Binds to the 23S rRNA K02929 - - 0.0000000000000000000000000000000000000000000001992 168.0
DYD1_k127_5874116_6 thioesterase - - - 0.0000000000000000000000000000000000000004694 150.0
DYD1_k127_5874116_7 zinc finger - - - 0.00000000000000000000000004409 109.0
DYD1_k127_5874116_8 Joins adenosylcobinamide-GDP and alpha-ribazole to generate adenosylcobalamin (Ado-cobalamin). Also synthesizes adenosylcobalamin 5'-phosphate from adenosylcobinamide-GDP and alpha-ribazole 5'-phosphate K02233 - 2.7.8.26 0.00000000000000000002891 100.0
DYD1_k127_5874116_9 PFAM ribosomal protein K02978 GO:0000028,GO:0003674,GO:0003735,GO:0005198,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0006412,GO:0006518,GO:0006807,GO:0006996,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0015935,GO:0016043,GO:0019538,GO:0022607,GO:0022613,GO:0022618,GO:0022626,GO:0022627,GO:0032991,GO:0034622,GO:0034641,GO:0034645,GO:0042254,GO:0042255,GO:0042274,GO:0043043,GO:0043170,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043603,GO:0043604,GO:0043933,GO:0044085,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:0065003,GO:0070925,GO:0071704,GO:0071826,GO:0071840,GO:1901564,GO:1901566,GO:1901576,GO:1990904 - 0.0000000000008206 70.0
DYD1_k127_5886785_0 Pyruvate phosphate dikinase K01006 - 2.7.9.1 0.0 1392.0
DYD1_k127_5886785_1 This protein promotes the GTP-dependent binding of aminoacyl-tRNA to the A-site of ribosomes during protein biosynthesis K03231 - - 1.198e-264 818.0
DYD1_k127_5886785_10 - - - - 0.000000000000000000000000002796 118.0
DYD1_k127_5886785_11 DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates K03059 - 2.7.7.6 0.0000000000000000000000002681 105.0
DYD1_k127_5886785_12 copper ion binding - - - 0.0000000000000000000000404 106.0
DYD1_k127_5886785_13 Zinc finger, C2H2 type - - - 0.00000000000000000000007741 101.0
DYD1_k127_5886785_14 serine-type endopeptidase activity - - - 0.0000000000000001841 87.0
DYD1_k127_5886785_15 Belongs to the P(II) protein family K04751 - - 0.00000002045 55.0
DYD1_k127_5886785_2 Catalyzes two subsequent steps in gluconeogenesis the aldol condensation of dihydroxyacetone phosphate (DHAP) and glyceraldehyde-3-phosphate (GA3P) to fructose-1,6-bisphosphate (FBP), and the dephosphorylation of FBP to fructose-6-phosphate (F6P) K01622 - 3.1.3.11,4.1.2.13 1.495e-222 692.0
DYD1_k127_5886785_3 Periplasmic binding protein K02016 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003232 473.0
DYD1_k127_5886785_4 UPF0126 domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008736 311.0
DYD1_k127_5886785_5 Involved in the gluconeogenesis. Catalyzes stereospecifically the conversion of dihydroxyacetone phosphate (DHAP) to D-glyceraldehyde-3-phosphate (G3P) K01803 - 5.3.1.1 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000003814 295.0
DYD1_k127_5886785_6 Multicopper oxidase K00368 - 1.7.2.1 0.000000000000000000000000000000000000000000000000000000001273 209.0
DYD1_k127_5886785_7 PFAM Copper binding proteins, plastocyanin azurin family - - - 0.0000000000000000000000000000000000000000000000000004314 195.0
DYD1_k127_5886785_8 - - - - 0.000000000000000000000000000000000000000000000000003656 184.0
DYD1_k127_5886785_9 Involved in the binding of tRNA to the ribosomes K02946 GO:0002181,GO:0003674,GO:0003735,GO:0005198,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0006412,GO:0006518,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0015935,GO:0019538,GO:0022626,GO:0022627,GO:0032991,GO:0034641,GO:0034645,GO:0043043,GO:0043170,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:0071704,GO:1901564,GO:1901566,GO:1901576,GO:1990904 - 0.00000000000000000000000000000001356 128.0
DYD1_k127_5900324_0 Anticodon-binding domain of tRNA K01873 - 6.1.1.9 0.0 1147.0
DYD1_k127_5900324_1 Catalyzes the synthesis of GMP from XMP K01951 - 6.3.5.2 1.514e-237 737.0
DYD1_k127_5900324_2 Catalyzes the transfer of diphosphate from ATP to 6- hydroxymethyl-7,8-dihydropterin (6-HMD), leading to 6- hydroxymethyl-7,8-dihydropterin diphosphate (6-HMDP) K07142 - 2.7.6.3 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002592 359.0
DYD1_k127_5900324_3 - - - - 0.000000000000000000000000000000000000000000000000000000000000000000001936 241.0
DYD1_k127_5906586_0 Heme copper-type cytochrome quinol K02274 - 1.9.3.1 1.523e-282 873.0
DYD1_k127_5906586_1 synthetase (class II) K01880 - 6.1.1.14 1.882e-271 841.0
DYD1_k127_5906586_10 Zn-dependent protease with chaperone function K03799 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000225 361.0
DYD1_k127_5906586_11 Activator of Hsp90 ATPase homolog 1-like protein - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003255 339.0
DYD1_k127_5906586_12 - - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001468 317.0
DYD1_k127_5906586_13 Phosphoglycerate mutase family K15634 - 5.4.2.12 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008485 302.0
DYD1_k127_5906586_14 Heme copper-type cytochrome quinol oxidases, subunit 2 K02275 - 1.9.3.1 0.00000000000000000000000000000000000000000000000000000000000000000000000000000003044 273.0
DYD1_k127_5906586_15 PFAM blue (type 1) copper domain protein - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000006068 272.0
DYD1_k127_5906586_16 PspA/IM30 family K03969 - - 0.000000000000000000000000000000000000000000000000000000000000000000000001635 252.0
DYD1_k127_5906586_17 PFAM Methyltransferase type K15256 - - 0.00000000000000000000000000000000000000000000000000000000000000000000007522 244.0
DYD1_k127_5906586_18 Cytochrome oxidase assembly protein K02259 - - 0.00000000000000000000000000000000000000000000000000000000004299 207.0
DYD1_k127_5906586_2 DegT/DnrJ/EryC1/StrS aminotransferase family - - - 8.275e-226 702.0
DYD1_k127_5906586_20 HxlR-like helix-turn-helix - - - 0.000000000000000000000000000000000000003533 150.0
DYD1_k127_5906586_21 - - - - 0.00000000000000000000000000000000001634 148.0
DYD1_k127_5906586_23 - - - - 0.000000000000000000000000000000001532 134.0
DYD1_k127_5906586_24 - - - - 0.0000000000000000000000000000000406 128.0
DYD1_k127_5906586_25 - - - - 0.0000000000000000000000000003301 113.0
DYD1_k127_5906586_26 response regulator, receiver - - - 0.00000000000000000000447 97.0
DYD1_k127_5906586_27 - - - - 0.0000000000000000000185 93.0
DYD1_k127_5906586_29 SnoaL-like domain - - - 0.000002145 55.0
DYD1_k127_5906586_3 Belongs to the UDP-glucose GDP-mannose dehydrogenase family K02472 - 1.1.1.336 1.146e-219 688.0
DYD1_k127_5906586_4 Major Facilitator Superfamily - - - 7.682e-211 665.0
DYD1_k127_5906586_5 PFAM Iron-containing alcohol dehydrogenase K18602 - - 6.378e-194 607.0
DYD1_k127_5906586_6 Catalyzes the interconversion of methylthioribose-1- phosphate (MTR-1-P) into methylthioribulose-1-phosphate (MTRu-1- P) K08963 - 5.3.1.23 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000016 607.0
DYD1_k127_5906586_7 - - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001677 413.0
DYD1_k127_5906586_8 PFAM NADP oxidoreductase coenzyme F420-dependent K06988 - 1.5.1.40 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004555 365.0
DYD1_k127_5906586_9 Coenzyme PQQ synthesis protein D (PqqD) - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001252 362.0
DYD1_k127_593166_0 PFAM YHS domain K01533,K17686 - 3.6.3.4,3.6.3.54 0.0 1185.0
DYD1_k127_593166_1 magnesium chelatase K03405 - 6.6.1.1 3.483e-302 932.0
DYD1_k127_593166_10 conserved protein implicated in secretion - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002118 351.0
DYD1_k127_593166_11 PAC2 family K07159 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003516 351.0
DYD1_k127_593166_12 Belongs to the short-chain dehydrogenases reductases (SDR) family K07124 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001232 306.0
DYD1_k127_593166_13 O-methyltransferase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000004262 297.0
DYD1_k127_593166_14 Located at the top of the head of the 30S subunit, it contacts several helices of the 16S rRNA. In the 70S ribosome it contacts the 23S rRNA (bridge B1a) and protein L5 of the 50S subunit (bridge B1b), connecting the 2 subunits K02952 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000003087 275.0
DYD1_k127_593166_15 Regulatory protein MarR - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000007814 271.0
DYD1_k127_593166_16 One of the primary rRNA binding proteins, it binds directly to 16S rRNA where it nucleates assembly of the body of the 30S subunit K02986 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000003142 269.0
DYD1_k127_593166_18 - - - - 0.00000000000000000000000000000000000000000000000000000000000038 214.0
DYD1_k127_593166_19 ATP binding protein K06883 - - 0.0000000000000000000000000000000000000000000002037 177.0
DYD1_k127_593166_2 TIGRFAM glucosamine--fructose-6-phosphate aminotransferase (isomerizing) K00820 - 2.6.1.16 2.626e-296 917.0
DYD1_k127_593166_20 Cyclophilin-like K09143 - - 0.00000000000000000000000000000000000000000009262 162.0
DYD1_k127_593166_22 S25 ribosomal protein K02975 - - 0.000000000000000000000000000000003096 131.0
DYD1_k127_593166_23 Heavy-metal-associated domain K01533 - 3.6.3.4 0.00000000000000000000000000000001054 127.0
DYD1_k127_593166_24 von Willebrand factor, type A K07114 - - 0.00000000000000000000000000001032 124.0
DYD1_k127_593166_25 - - - - 0.00000000000000000000000000005597 117.0
DYD1_k127_593166_27 PFAM Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase - - - 0.0000000000000001687 88.0
DYD1_k127_593166_3 DNA ligase that seals nicks in double-stranded DNA during DNA replication, DNA recombination and DNA repair K10747 - 6.5.1.1,6.5.1.6,6.5.1.7 1.535e-292 906.0
DYD1_k127_593166_30 regulator - - - 0.000003217 55.0
DYD1_k127_593166_4 PFAM S-layer - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001253 490.0
DYD1_k127_593166_5 Belongs to the enoyl-CoA hydratase isomerase family K01715,K15019 - 4.2.1.116,4.2.1.17 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001918 484.0
DYD1_k127_593166_6 PFAM Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase K07709 - 2.7.13.3 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004592 462.0
DYD1_k127_593166_7 Lysylphosphatidylglycerol synthase TM region K07027 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004221 456.0
DYD1_k127_593166_8 Catalyzes the ATP-dependent phosphorylation of L- homoserine to L-homoserine phosphate K00872 - 2.7.1.39 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000705 421.0
DYD1_k127_593166_9 Belongs to the arginase family K01480 - 3.5.3.11 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002949 377.0
DYD1_k127_5990701_0 Catalyzes the formation of phosphoribosylamine from phosphoribosylpyrophosphate (PRPP) and glutamine K01953,K06927 - 6.3.1.14,6.3.5.4 1.349e-227 717.0
DYD1_k127_5990701_1 Domain of unknown function (DUF1297) K06863 - 6.3.4.23 4.259e-208 649.0
DYD1_k127_5990701_10 Transposase, IS605 OrfB family K07496 - - 0.00000000000000000000000000000000000000000000000000000000000000005386 239.0
DYD1_k127_5990701_11 PBS lyase HEAT-like repeat K06072 - 1.14.99.29 0.0000000000000000000000000000000000000000000000000000000000000001248 224.0
DYD1_k127_5990701_14 glucosylceramidase activity - - - 0.000000000000000000000000000000000000000000002543 166.0
DYD1_k127_5990701_15 Glyoxalase bleomycin resistance protein dioxygenase K06996 - - 0.000000000000000000000000000000000000000001211 160.0
DYD1_k127_5990701_16 mttA/Hcf106 family K03116 - - 0.00000000000000000000000000000000000002465 146.0
DYD1_k127_5990701_17 Circadian clock protein KaiC - - - 0.0000000000000000000001455 104.0
DYD1_k127_5990701_18 PFAM ATP-binding region ATPase domain protein - - - 0.00000000000000003711 86.0
DYD1_k127_5990701_19 response regulator, receiver - - - 0.00000000000000005941 86.0
DYD1_k127_5990701_2 Mannosyl-3-phosphoglycerate synthase K05947 GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0044424,GO:0044464 2.4.1.217 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004593 393.0
DYD1_k127_5990701_20 Transcriptional regulator - - - 0.000000002028 63.0
DYD1_k127_5990701_21 Transcriptional regulator - - - 0.00003487 52.0
DYD1_k127_5990701_22 - - - - 0.0002688 48.0
DYD1_k127_5990701_3 - - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000276 372.0
DYD1_k127_5990701_4 COG1335 Amidases related to nicotinamidase K09020 - 3.5.1.110 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003211 351.0
DYD1_k127_5990701_5 Part of the twin-arginine translocation (Tat) system that transports large folded proteins containing a characteristic twin-arginine motif in their signal peptide across membranes K03118 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006947 344.0
DYD1_k127_5990701_6 - - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003467 304.0
DYD1_k127_5990701_7 phosphoserine phosphatase K01079 - 3.1.3.3 0.00000000000000000000000000000000000000000000000000000000000000000000000000000368 270.0
DYD1_k127_5990701_8 Bifunctional nuclease K08999 - - 0.000000000000000000000000000000000000000000000000000000000000000000006661 236.0
DYD1_k127_5990701_9 Transposase, IS605 OrfB family K07496 - - 0.0000000000000000000000000000000000000000000000000000000000000000005775 243.0
DYD1_k127_599858_0 DNA repair enzyme that has both DNA N-glycosylase activity and AP-lyase activity. The DNA N-glycosylase activity releases various damaged pyrimidines from DNA by cleaving the N- glycosidic bond, leaving an AP (apurinic apyrimidinic) site. The AP-lyase activity cleaves the phosphodiester bond 3' to the AP site by a beta-elimination, leaving a 3'-terminal unsaturated sugar and a product with a terminal 5'-phosphate K10773 - 4.2.99.18 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001108 363.0
DYD1_k127_599858_1 - - - - 0.00000000000000000000000000000000000000000000000000000004325 204.0
DYD1_k127_599858_2 Bacterial regulatory protein, arsR family - - - 0.00000000000000000000000000000000000000000000000008246 179.0
DYD1_k127_599858_3 - - - - 0.00000000000000000000000000000000000000000958 154.0
DYD1_k127_599858_4 Transcriptional regulator - - - 0.000000000000000000000000000000000000006278 147.0
DYD1_k127_599858_5 - - - - 0.00000000000000000000000000000003772 141.0
DYD1_k127_6009308_0 Possesses two activities a DNA synthesis (polymerase) and an exonucleolytic activity that degrades single-stranded DNA in the 3' to 5' direction. Has a template-primer preference which is characteristic of a replicative DNA polymerase K02323 - 2.7.7.7 3.594e-232 727.0
DYD1_k127_6009308_1 Involved in regulation of DNA replication K10725 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002843 548.0
DYD1_k127_6009308_12 Transcriptional regulator - - - 0.000000000000006968 78.0
DYD1_k127_6009308_15 Winged helix-turn-helix - - - 0.0001126 49.0
DYD1_k127_6009308_2 PFAM beta-lactamase domain protein K06897 - 2.5.1.105 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006495 497.0
DYD1_k127_6009308_3 PFAM Adenylate and Guanylate cyclase catalytic domain K01768 - 4.6.1.1 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000254 379.0
DYD1_k127_6009308_4 Transcription factor that plays a role in the activation of archaeal genes transcribed by RNA polymerase. Facilitates transcription initiation by enhancing TATA-box recognition by TATA-box-binding protein (Tbp), and transcription factor B (Tfb) and RNA polymerase recruitment. Not absolutely required for transcription in vitro, but particularly important in cases where Tbp or Tfb function is not optimal. It dynamically alters the nucleic acid-binding properties of RNA polymerases by stabilizing the initiation complex and destabilizing elongation complexes. Seems to translocate with the RNA polymerase following initiation and acts by binding to the non template strand of the transcription bubble in elongation complexes K03136 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004087 332.0
DYD1_k127_6009308_5 Prenyltransferase that catalyzes the transfer of the geranylgeranyl moiety of geranylgeranyl diphosphate (GGPP) to the C3 hydroxyl of sn-glycerol-1-phosphate (G1P). This reaction is the first ether-bond-formation step in the biosynthesis of archaeal membrane lipids K17104 - 2.5.1.41 0.000000000000000000000000000000000000000000000000000000000000000000000000000000001123 274.0
DYD1_k127_6009308_6 - - - - 0.0000000000000000000000000000000000000000000000000000000007066 204.0
DYD1_k127_6009308_7 response regulator, receiver - - - 0.000000000000000000000000000000000000000000000004954 175.0
DYD1_k127_6009308_8 - - - - 0.00000000000000000000000000000000000000007011 154.0
DYD1_k127_6009308_9 Converts heme B (protoheme IX) to heme O by substitution of the vinyl group on carbon 2 of heme B porphyrin ring with a hydroxyethyl farnesyl side group K02259 - - 0.0000000000000000000000000000001173 129.0
DYD1_k127_6013923_0 ATP-dependent agmatine transferase that catalyzes the formation of 2-agmatinylcytidine (agm2C) at the wobble position (C34) of tRNA(Ile2), converting the codon specificity from AUG to AUA K06932 - 6.3.4.22 5.352e-220 688.0
DYD1_k127_6013923_1 Catalyzes the gamma-elimination of phosphate from L- phosphohomoserine and the beta-addition of water to produce L- threonine K01733 - 4.2.3.1 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001037 501.0
DYD1_k127_6013923_2 - - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000002418 267.0
DYD1_k127_6013923_3 NADH ubiquinone oxidoreductase - - - 0.00000000000000000000000000000000000000000000000000000000000007735 212.0
DYD1_k127_6013923_4 Catalyzes the hydrolysis of the adenine ring of phosphoribosyl-AMP K01496 - 3.5.4.19 0.0000000000000000000000000000000000000000000000000000000007802 201.0
DYD1_k127_6013923_5 Important for reducing fluoride concentration in the cell, thus reducing its toxicity K06199 - - 0.0000000000000000000000000000000000000000000000000001355 188.0
DYD1_k127_6013923_6 Uncharacterized ACR, COG1993 K09137 - - 0.0000000000000000000000000000000001559 134.0
DYD1_k127_6013923_7 small metal-binding protein - - - 0.0000000000000004051 81.0
DYD1_k127_6013923_8 domain protein K02238 - - 0.0000000006485 70.0
DYD1_k127_6016401_0 Belongs to the class-I aminoacyl-tRNA synthetase family K04566 - 6.1.1.6 1.831e-282 874.0
DYD1_k127_6016401_1 Histone acetyltransferase K07739 - 2.3.1.48 3.211e-275 853.0
DYD1_k127_6016401_2 phosphohydrolase (DHH superfamily) K07097 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001584 493.0
DYD1_k127_6016401_3 Short-chain dehydrogenase reductase SDR K00059 - 1.1.1.100 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000193 400.0
DYD1_k127_6016401_4 HAD-superfamily hydrolase, subfamily IA, variant 3 K01091,K01838,K07025 - 3.1.3.18,5.4.2.6 0.000000000000000000000000000000000000000000000000000000000000000000001016 243.0
DYD1_k127_6016401_5 - - - - 0.0000000000000000000000000000000000000000000000000000000001016 207.0
DYD1_k127_6016401_6 Belongs to the P(II) protein family K04751 - - 0.000000000000000000000000000000000000000000000000000000001142 203.0
DYD1_k127_6016401_7 Involved in regulation of DNA replication K10725 - - 0.000000000000000000000000000000000000000000000003379 177.0
DYD1_k127_6016401_8 PFAM blue (type 1) copper domain protein - - - 0.0000000000000000000000000000000001281 137.0
DYD1_k127_6016401_9 Transcriptional regulator - - - 0.000000000000000000000000000007927 119.0
DYD1_k127_6018705_0 Belongs to the FPP GGPP synthase family K02523 - 2.5.1.90 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003994 353.0
DYD1_k127_6018705_1 Iron-containing redox enzyme K06137 - 1.3.3.11 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006229 306.0
DYD1_k127_6134797_0 Sulfite reductase K00392 - 1.8.7.1 0.0 1043.0
DYD1_k127_6134797_1 ABC transporter K01990 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002333 518.0
DYD1_k127_6134797_11 Universal stress protein - - - 0.00000000000000000000000000000573 124.0
DYD1_k127_6134797_12 - - - - 0.000000000000000008809 83.0
DYD1_k127_6134797_13 One of the primary rRNA binding proteins. Required for association of the 30S and 50S subunits to form the 70S ribosome, for tRNA binding and peptide bond formation. It has been suggested to have peptidyltransferase activity K02886 - - 0.000000000000001529 76.0
DYD1_k127_6134797_15 Broad-Complex, Tramtrack and Bric a brac K10512 GO:0000981,GO:0001503,GO:0003674,GO:0003700,GO:0005575,GO:0005622,GO:0005623,GO:0005634,GO:0006355,GO:0006357,GO:0006950,GO:0006974,GO:0007275,GO:0008150,GO:0009888,GO:0009889,GO:0009987,GO:0010468,GO:0010556,GO:0019219,GO:0019222,GO:0030282,GO:0031214,GO:0031323,GO:0031326,GO:0032501,GO:0032502,GO:0033554,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0044424,GO:0044464,GO:0048513,GO:0048731,GO:0048856,GO:0050789,GO:0050794,GO:0050896,GO:0051171,GO:0051252,GO:0051716,GO:0060255,GO:0065007,GO:0080090,GO:0140110,GO:1903506,GO:2000112,GO:2001141 - 0.0005123 43.0
DYD1_k127_6134797_2 Rhodanese Homology Domain K01011 - 2.8.1.1,2.8.1.2 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008558 434.0
DYD1_k127_6134797_3 PFAM ABC-2 type transporter K01992 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002228 403.0
DYD1_k127_6134797_4 AAA domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000001287 299.0
DYD1_k127_6134797_5 Belongs to the UPF0201 family K09736 - - 0.0000000000000000000000000000000000000000000000000000000000000000001645 235.0
DYD1_k127_6134797_6 Catalyzes the hydrolysis of inorganic pyrophosphate (PPi) forming two phosphate ions K01507 - 3.6.1.1 0.000000000000000000000000000000000000000000000000000000000000002804 221.0
DYD1_k127_6134797_7 COG0346 Lactoylglutathione lyase and related lyases K07032 - - 0.0000000000000000000000000000000000000000000000000000003245 197.0
DYD1_k127_6134797_8 - - - - 0.0000000000000000000000000000000000000000000000008552 178.0
DYD1_k127_6134797_9 - - - - 0.000000000000000000000000000000000000000000000006666 173.0
DYD1_k127_6138514_0 argininosuccinate lyase K01755 - 4.3.2.1 5.852e-203 642.0
DYD1_k127_6138514_1 fumarate reductase flavoprotein K00239 - 1.3.5.1,1.3.5.4 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001501 522.0
DYD1_k127_6138514_2 TIGRFAM succinate dehydrogenase and fumarate reductase iron-sulfur protein K00240 - 1.3.5.1,1.3.5.4 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005596 445.0
DYD1_k127_6138514_3 HMGL-like K01649 - 2.3.3.13 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001144 421.0
DYD1_k127_6138514_4 Iron-sulfur cluster assembly protein - - - 0.0000000000000000000000000000000000000000000000000000001271 196.0
DYD1_k127_6138514_5 Succinate dehydrogenase/Fumarate reductase transmembrane subunit K00241 - - 0.000000000000000000000000000000000000000000000002958 181.0
DYD1_k127_6138514_6 Succinate dehydrogenase/Fumarate reductase transmembrane subunit K00242 - - 0.000000000000000000000000000000000000000000001672 168.0
DYD1_k127_6150441_0 Catalyzes the release of L-lysine from LysW -gamma-L- lysine and the release of L-ornithine from LysW -L-ornithine K05831 - - 1.948e-210 657.0
DYD1_k127_6150441_1 diphthine synthase K20215 - 2.1.1.98 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002233 505.0
DYD1_k127_6150441_2 PFAM Rieske 2Fe-2S domain K00411 - 1.10.2.2 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001228 352.0
DYD1_k127_6150441_3 low-complexity proteins - - - 0.0000000000000000000000000000000000000000000000000000000000001695 216.0
DYD1_k127_6150441_4 Cytochrome b subunit of the bc complex K00412 - - 0.0000000000000000000000000000000000000000000000000000000006592 203.0
DYD1_k127_6182389_0 Glycosyl transferase family group 2 - - - 2.732e-207 652.0
DYD1_k127_6182389_1 Zinc phosphodiesterase, which displays some tRNA 3'- processing endonuclease activity. Probably involved in tRNA maturation, by removing a 3'-trailer from precursor tRNA K00784 - 3.1.26.11 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009074 487.0
DYD1_k127_6182389_2 serine-type endopeptidase activity K00505,K01342,K02035 - 1.14.18.1,3.4.21.62 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005677 453.0
DYD1_k127_6182389_3 Ribose-phosphate pyrophosphokinase K00948 - 2.7.6.1 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005364 400.0
DYD1_k127_6182389_4 COG0639 Diadenosine tetraphosphatase and related serine threonine protein phosphatases K01090,K06269 - 3.1.3.16 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001024 360.0
DYD1_k127_6182389_5 Stabilizes TBP binding to an archaeal box-A promoter. Also responsible for recruiting RNA polymerase II to the pre- initiation complex (DNA-TBP-TFIIB) K03124 - - 0.000000000000000000000000000000000000000000000000000000000000001852 229.0
DYD1_k127_6182389_6 carbamoyl-phosphate synthase (glutamine-hydrolyzing) activity K01955 - 6.3.5.5 0.0000000000000000000000000000000000000000000000000000002638 206.0
DYD1_k127_6182389_7 Domain of unknown function (DUF309) K09763 - - 0.00000000000000000000000000000000000000003203 158.0
DYD1_k127_6218979_0 AMP-binding enzyme C-terminal domain K01895 - 6.2.1.1 2.703e-246 763.0
DYD1_k127_6218979_1 protein (ATP-grasp superfamily) K07159 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005679 399.0
DYD1_k127_6218979_2 Uncharacterized ACR, COG1430 K09005 - - 0.000000000000000000000000000000000000000000000000000000000000000000000001415 247.0
DYD1_k127_6218979_3 Pyridoxamine 5'-phosphate - - - 0.0000000000000000000000000000000000000000000000000000000002294 206.0
DYD1_k127_6218979_4 COG1599 Single-stranded DNA-binding replication protein A (RPA), large (70 kD) subunit and related ssDNA-binding proteins K07466 - - 0.000000000000000000000000000000000000000000000004701 173.0
DYD1_k127_6226381_0 Catalyzes the ATP-dependent conversion of 5- aminoimidazole ribonucleotide (AIR) and HCO(3)(-) to N5- carboxyaminoimidazole ribonucleotide (N5-CAIR) K01589 - 6.3.4.18 6.917e-199 625.0
DYD1_k127_6226381_1 Catalyzes the conversion of N5-carboxyaminoimidazole ribonucleotide (N5-CAIR) to 4-carboxy-5-aminoimidazole ribonucleotide (CAIR) K01588 - 5.4.99.18 0.000000000000000000000000000000000000000000000000000000000000000000000000001518 257.0
DYD1_k127_6226381_2 SAICAR synthetase K01923 - 6.3.2.6 0.000000000000000000000000000000000000000000000000000000000000000000002354 237.0
DYD1_k127_6226381_3 - - - - 0.00000000000000000000000000008736 120.0
DYD1_k127_6226381_4 - - - - 0.00000000000000000007057 93.0
DYD1_k127_6254400_0 IGPS catalyzes the conversion of PRFAR and glutamine to IGP, AICAR and glutamate. The HisH subunit provides the glutamine amidotransferase activity that produces the ammonia necessary to HisF for the synthesis of IGP and AICAR K02501 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001257 339.0
DYD1_k127_6254400_1 imidazoleglycerol-phosphate dehydratase K01693 - 4.2.1.19 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002334 317.0
DYD1_k127_6254400_2 Protein of unknown function (DUF1348) K09958 - - 0.000000000000000000000000000000000000000000000000000000000000000000001903 238.0
DYD1_k127_6254400_3 Belongs to the arginase family K01476 - 3.5.3.1 0.000000000000000000000000000000000000000000000000000000000000000001921 237.0
DYD1_k127_6254400_5 1-(5-phosphoribosyl)-5- (5-phosphoribosylamino)methylideneamino imidazole-4-carboxamide isomerase K01814 - 5.3.1.16 0.0000000000000000000000005112 106.0
DYD1_k127_6254400_6 HxlR-like helix-turn-helix - - - 0.00000000000001812 74.0
DYD1_k127_6307530_0 PFAM TCP-1 cpn60 chaperonin family K22447 GO:0003674,GO:0005488,GO:0005515,GO:0006457,GO:0006458,GO:0008150,GO:0009987,GO:0044183,GO:0051082,GO:0061077 - 5.656e-204 650.0
DYD1_k127_6307530_1 Required for maturation of urease via the functional incorporation of the urease nickel metallocenter K03190 - - 0.000000000000000000000000000000000000000000000001585 183.0
DYD1_k127_6307530_2 PFAM Nickel cobalt transporter, high-affinity - - - 0.000000000000000000000000000000000000000001885 165.0
DYD1_k127_6307530_3 Belongs to the arginase family K01480 - 3.5.3.11 0.00000000000000000000005676 98.0
DYD1_k127_6307530_4 Belongs to the urease gamma subunit family K01430 - 3.5.1.5 0.00008035 51.0
DYD1_k127_6315826_0 pfkB family carbohydrate kinase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005372 478.0
DYD1_k127_6315826_1 Catalyzes the reversible phosphorylation of S-methyl-5'- thioadenosine (MTA) to adenine and 5-methylthioribose-1-phosphate. Involved in the breakdown of MTA, a major by-product of polyamine biosynthesis. Responsible for the first step in the methionine salvage pathway after MTA has been generated from S- adenosylmethionine. Has broad substrate specificity with 6- aminopurine nucleosides as preferred substrates K00772 - 2.4.2.28 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007701 450.0
DYD1_k127_6315826_10 Belongs to the class I-like SAM-binding methyltransferase superfamily. Trm1 family K00555 - 2.1.1.215,2.1.1.216 0.000000000000000000000000000000000000000000000000000000001313 203.0
DYD1_k127_6315826_11 - - - - 0.0000000000000000000000000000000000000000000000000001152 187.0
DYD1_k127_6315826_12 - - - - 0.0000000000000000000000000000000000000000000000003482 179.0
DYD1_k127_6315826_13 Protein of unknown function (DUF424) K09148 - - 0.00000000000000000000000000000000004432 136.0
DYD1_k127_6315826_14 - - - - 0.000000000000000000000327 99.0
DYD1_k127_6315826_15 - - - - 0.00000001255 63.0
DYD1_k127_6315826_16 Vinylacetyl-CoA Delta-isomerase K14534 - 4.2.1.120,5.3.3.3 0.00002287 46.0
DYD1_k127_6315826_2 oxidoreductase FAD NAD(P)-binding K00523,K00528 - 1.17.1.1,1.18.1.2,1.19.1.1 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009254 412.0
DYD1_k127_6315826_3 Serine threonine protein kinase involved in cell cycle control K07178 - 2.7.11.1 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005152 343.0
DYD1_k127_6315826_4 Flavin prenyltransferase that catalyzes the synthesis of the prenylated FMN cofactor (prenyl-FMN) for 4-hydroxy-3- polyprenylbenzoic acid decarboxylase UbiD. The prenyltransferase is metal-independent and links a dimethylallyl moiety from dimethylallyl monophosphate (DMAP) to the flavin N5 and C6 atoms of FMN K03186 - 2.5.1.129 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000001869 295.0
DYD1_k127_6315826_5 K homology RNA-binding domain K06961 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000001777 289.0
DYD1_k127_6315826_6 COG2406 Protein distantly related to bacterial ferritins K03594 - 1.16.3.1 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000002243 287.0
DYD1_k127_6315826_7 - - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000005261 251.0
DYD1_k127_6315826_8 Catalyzes a salvage reaction resulting in the formation of AMP, that is energically less costly than de novo synthesis K00759 - 2.4.2.7 0.0000000000000000000000000000000000000000000000000000000000000000000002194 246.0
DYD1_k127_6315826_9 - - - - 0.00000000000000000000000000000000000000000000000000000000000000001847 226.0
DYD1_k127_6339531_0 Belongs to the UPF0284 family - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001084 448.0
DYD1_k127_6339531_1 Catalyzes the epimerization of the S- and R-forms of NAD(P)HX, a damaged form of NAD(P)H that is a result of enzymatic or heat-dependent hydration. This is a prerequisite for the S- specific NAD(P)H-hydrate dehydratase to allow the repair of both epimers of NAD(P)HX K17759 - 5.1.99.6 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006319 351.0
DYD1_k127_6339531_2 Metallo-beta-lactamase superfamily - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000011 339.0
DYD1_k127_6339531_3 Transcriptional regulator - - - 0.000000000000000002744 89.0
DYD1_k127_6366655_0 Metal dependent phosphohydrolases with conserved 'HD' motif. - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005416 603.0
DYD1_k127_6366655_1 methylase K00590 - 2.1.1.113 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001689 546.0
DYD1_k127_6366655_2 Transcriptional regulator - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006292 438.0
DYD1_k127_6366655_3 Cob(II)yrinic acid a,c-diamide reductase K04719 - 1.13.11.79 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005549 391.0
DYD1_k127_6366655_4 Alpha beta hydrolase K06889 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002382 366.0
DYD1_k127_6366655_5 Methylase involved in ubiquinone menaquinone biosynthesis - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001669 337.0
DYD1_k127_6366655_6 Prenyltransferase that catalyzes the transfer of the geranylgeranyl moiety of geranylgeranyl diphosphate (GGPP) to the C2 hydroxyl of (S)-3-O-geranylgeranylglyceryl phosphate (GGGP). This reaction is the second ether-bond-formation step in the biosynthesis of archaeal membrane lipids K02548,K17105,K20616 - 2.5.1.42,2.5.1.74 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000251 282.0
DYD1_k127_6366655_8 Transcriptional regulator - - - 0.0000000000000000000000000001307 115.0
DYD1_k127_6366655_9 - - - - 0.0000000000000000000837 93.0
DYD1_k127_6374193_0 Aconitase family (aconitate hydratase) K01681 - 4.2.1.3 8.481e-260 814.0
DYD1_k127_6374193_1 Belongs to the PdxS SNZ family K06215 - 4.3.3.6 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003358 570.0
DYD1_k127_6374193_10 PFAM SPFH domain Band 7 family - - - 0.000000000000002971 76.0
DYD1_k127_6374193_2 Phosphate transporter family K03306 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003496 505.0
DYD1_k127_6374193_3 Catalyzes the hydrolysis of glutamine to glutamate and ammonia as part of the biosynthesis of pyridoxal 5'-phosphate. The resulting ammonia molecule is channeled to the active site of PdxS K08681 - 4.3.3.6 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001924 326.0
DYD1_k127_6374193_4 PFAM SPFH domain Band 7 family - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000001901 267.0
DYD1_k127_6374193_5 Protein of unknown function DUF47 K07220 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000006757 262.0
DYD1_k127_6374193_6 - - - - 0.000000000000000000000000000000000009912 142.0
DYD1_k127_6374193_7 PFAM SPFH domain Band 7 family - - - 0.00000000000000000000000000000001359 132.0
DYD1_k127_6374193_8 - - - - 0.0000000000000000000000000000007735 133.0
DYD1_k127_6374193_9 Cell division protein 48 (CDC48), domain 2 K13525 - - 0.00000000000000000000203 105.0
DYD1_k127_6417033_0 PFAM TCP-1 cpn60 chaperonin family K22447 - - 4.507e-207 651.0
DYD1_k127_6417033_1 Belongs to the carbohydrate kinase PfkB family K00852 - 2.7.1.15 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002755 513.0
DYD1_k127_6417033_4 - - - - 0.000000000000000000000000000000000513 132.0
DYD1_k127_6417033_5 PFAM MazG nucleotide pyrophosphohydrolase - - - 0.0000000000000000000000000000006257 123.0
DYD1_k127_6417033_6 Bacterial regulatory protein, Fis family K07713 - - 0.0000000000001418 77.0
DYD1_k127_6477126_0 Subtilase family K01342 - 3.4.21.62 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000001486 295.0
DYD1_k127_6477126_1 Stabilizes TBP binding to an archaeal box-A promoter. Also responsible for recruiting RNA polymerase II to the pre- initiation complex (DNA-TBP-TFIIB) K03124 - - 0.0000000000000000000001039 98.0
DYD1_k127_6477126_2 PFAM response regulator receiver - - - 0.00000000000004781 77.0
DYD1_k127_6477126_3 Transferase hexapeptide repeat containing protein K00973 - 2.7.7.24 0.00000000004435 72.0
DYD1_k127_6499497_0 S-adenosylmethionine synthetase K00789 - 2.5.1.6 7.237e-231 717.0
DYD1_k127_6499497_1 glycosyl transferase family 2 K00721 - 2.4.1.83 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009652 535.0
DYD1_k127_6499497_10 snRNP Sm proteins K04796 - - 0.00000000000000000000000000000000000007458 143.0
DYD1_k127_6499497_12 Short-chain dehydrogenase reductase SDR K00059 - 1.1.1.100 0.0000000000000000000000000007977 115.0
DYD1_k127_6499497_13 - - - - 0.0000000000000000000000002026 112.0
DYD1_k127_6499497_18 Bacterial PH domain - - - 0.00005329 50.0
DYD1_k127_6499497_3 Methyltransferase type 11 - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009863 374.0
DYD1_k127_6499497_4 - - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000001874 279.0
DYD1_k127_6499497_5 RecA RadA K04482,K04483 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000003256 271.0
DYD1_k127_6499497_6 Pyridoxamine 5'-phosphate oxidase K07005 - - 0.00000000000000000000000000000000000000000000000000000000000001619 218.0
DYD1_k127_6499497_7 Tetrahydromethanopterin S-methyltransferase, subunit A K00577 - 2.1.1.86 0.0000000000000000000000000000000000000000000000000000000000006544 213.0
DYD1_k127_6499497_8 Glyoxalase-like domain K01759 - 4.4.1.5 0.00000000000000000000000000000000000000000000000000000000006894 206.0
DYD1_k127_6499497_9 dUTPase - - - 0.00000000000000000000000000000000000000000000000000000001267 199.0
DYD1_k127_6513173_0 Catalyzes the isomerization between 2-isopropylmalate and 3-isopropylmalate, via the formation of 2-isopropylmaleate K01703 - 4.2.1.33,4.2.1.35 3.211e-256 792.0
DYD1_k127_6513173_1 F420-0:Gamma-glutamyl ligase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003088 390.0
DYD1_k127_6513173_10 Winged helix-turn-helix - - - 0.000000005472 61.0
DYD1_k127_6513173_11 ChaB K06197 - - 0.00000001552 59.0
DYD1_k127_6513173_3 3-isopropylmalate dehydratase, small subunit K01704 - 4.2.1.33,4.2.1.35 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002121 313.0
DYD1_k127_6513173_4 - - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000004108 258.0
DYD1_k127_6513173_5 - - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000002385 256.0
DYD1_k127_6513173_6 - - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000002419 259.0
DYD1_k127_6515845_0 Methylmalonyl-CoA mutase K01848 - 5.4.99.2 1.244e-289 894.0
DYD1_k127_6515845_1 Involved in the biosynthesis of branched-chain amino acids (BCAA). Catalyzes an alkyl-migration followed by a ketol- acid reduction of (S)-2-acetolactate (S2AL) to yield (R)-2,3- dihydroxy-isovalerate. In the isomerase reaction, S2AL is rearranged via a Mg-dependent methyl migration to produce 3- hydroxy-3-methyl-2-ketobutyrate (HMKB). In the reductase reaction, this 2-ketoacid undergoes a metal-dependent reduction by NADPH to yield (R)-2,3-dihydroxy-isovalerate K00053 - 1.1.1.86 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000201 612.0
DYD1_k127_6515845_10 - - - - 0.0000000000000000000000000000000000000000000000000000000000001408 215.0
DYD1_k127_6515845_13 Response regulator with CheY-like receiver, AAA-type ATPase, and DNA-binding domains - - - 0.0000000000000000000000000000000000000000000000000001244 196.0
DYD1_k127_6515845_14 Transcriptional regulator - - - 0.0000000000000000000000000000000000000000000000004762 176.0
DYD1_k127_6515845_16 Transcriptional regulator - - - 0.000000000000000000001626 99.0
DYD1_k127_6515845_18 YHS domain - - - 0.000000000000000004907 84.0
DYD1_k127_6515845_2 ABC-type transport system, involved in lipoprotein release, permease component K02004 GO:0005575,GO:0005623,GO:0005886,GO:0016020,GO:0044464,GO:0071944 - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003971 483.0
DYD1_k127_6515845_3 LAO AO transport system ATPase K07588 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001728 479.0
DYD1_k127_6515845_4 Asparagine synthase K01953 - 6.3.5.4 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006248 439.0
DYD1_k127_6515845_5 ABC-type antimicrobial peptide transport system, ATPase component K02003,K09810 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002458 374.0
DYD1_k127_6515845_6 extracellular matrix structural constituent - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002114 351.0
DYD1_k127_6515845_7 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001299 312.0
DYD1_k127_6515845_8 B12 binding domain K01849 - 5.4.99.2 0.00000000000000000000000000000000000000000000000000000000000000000000000002017 252.0
DYD1_k127_6515845_9 Glyoxalase bleomycin resistance protein dioxygenase K05606 - 5.1.99.1 0.000000000000000000000000000000000000000000000000000000000000000000001216 237.0
DYD1_k127_6533443_0 Belongs to the class-II aminoacyl-tRNA synthetase family K01868 - 6.1.1.3 0.0 1062.0
DYD1_k127_6533443_1 Vinylacetyl-CoA Delta-isomerase K14534 - 4.2.1.120,5.3.3.3 9.122e-291 897.0
DYD1_k127_6533443_10 NUDIX domain - - - 0.0000000000000000000000000000000000000000000000000000000001165 207.0
DYD1_k127_6533443_11 Orotidine 5'-phosphate decarboxylase / HUMPS family K01591 - 4.1.1.23 0.00000000000000000000000000000000000000000000000000001228 197.0
DYD1_k127_6533443_12 - - - - 0.00000000000000000000000000000000000000000000000000002054 192.0
DYD1_k127_6533443_13 Bacterial Fe(2+) trafficking - - - 0.00000000000000000000000000000000000000000009801 161.0
DYD1_k127_6533443_14 - - - - 0.0000000000000000000000000000000005034 133.0
DYD1_k127_6533443_15 Winged helix-turn-helix - - - 0.000000000000000000000000000000005425 129.0
DYD1_k127_6533443_16 - - - - 0.0000000000000000000000000003317 114.0
DYD1_k127_6533443_17 - - - - 0.00000000000000000000000004258 107.0
DYD1_k127_6533443_2 Plays an important role in the de novo pathway of purine nucleotide biosynthesis. Catalyzes the first committed step in the biosynthesis of AMP from IMP K01939 - 6.3.4.4 2.754e-195 611.0
DYD1_k127_6533443_3 Domain of unknown function (DUF373) K08975 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003794 554.0
DYD1_k127_6533443_4 Belongs to the arginase family K01480 - 3.5.3.11 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002435 503.0
DYD1_k127_6533443_5 Transposase, is605 orfb family K07496 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002364 442.0
DYD1_k127_6533443_6 - - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001479 329.0
DYD1_k127_6533443_7 Specifically methylates the uridine in position 2552 of 23S rRNA at the 2'-O position of the ribose in the fully assembled 50S ribosomal subunit K02427 - 2.1.1.166 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000006149 279.0
DYD1_k127_6533443_8 - - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000004866 270.0
DYD1_k127_6533443_9 COG1522 Transcriptional regulators - - - 0.00000000000000000000000000000000000000000000000000000000000000001884 225.0
DYD1_k127_6597127_0 Beta propeller domain - - - 9.826e-256 804.0
DYD1_k127_6597127_1 S-adenosyl-L-homocysteine hydrolase, NAD binding domain K01251 - 3.3.1.1 2.727e-225 703.0
DYD1_k127_6597127_10 PFAM D12 class N6 adenine-specific DNA methyltransferase K06223 - 2.1.1.72 0.00000000000000000000000000000000000000000000000000000000000000000000000008166 257.0
DYD1_k127_6597127_11 - - - - 0.0000000000000000000000000000000000000000000000000000000000000000000001937 249.0
DYD1_k127_6597127_12 Rossmann fold nucleotide-binding protein K06966 - 3.2.2.10 0.000000000000000000000000000000000000000000000000000000000000000000002762 238.0
DYD1_k127_6597127_13 Protein involved in ribosomal biogenesis, contains PUA domain K07565 - - 0.0000000000000000000000000000000000000000000000000000009004 197.0
DYD1_k127_6597127_14 - - - - 0.00000000000000000000000000000000000000009625 153.0
DYD1_k127_6597127_15 Cupin domain - - - 0.0000000000000000000000000000000001633 134.0
DYD1_k127_6597127_16 Belongs to the eukaryotic ribosomal protein eL40 family K02927 - - 0.000000000000000000000003589 104.0
DYD1_k127_6597127_19 Transcriptional regulator - - - 0.00002182 49.0
DYD1_k127_6597127_2 3-hydroxyacyl-CoA dehydrogenase K15016 - 1.1.1.35,4.2.1.17 2.116e-208 652.0
DYD1_k127_6597127_21 Homocitrate synthase K01649 - 2.3.3.13 0.000449 46.0
DYD1_k127_6597127_3 Type III restriction enzyme, res subunit - - - 5.396e-196 629.0
DYD1_k127_6597127_4 Belongs to the class I-like SAM-binding methyltransferase superfamily. RsmB NOP family - GO:0001510,GO:0003674,GO:0003824,GO:0006139,GO:0006396,GO:0006399,GO:0006400,GO:0006725,GO:0006807,GO:0008033,GO:0008150,GO:0008152,GO:0008168,GO:0008173,GO:0008175,GO:0008757,GO:0009451,GO:0009987,GO:0010467,GO:0016070,GO:0016427,GO:0016428,GO:0016740,GO:0016741,GO:0030488,GO:0032259,GO:0034470,GO:0034641,GO:0034660,GO:0043170,GO:0043412,GO:0043414,GO:0044237,GO:0044238,GO:0044260,GO:0046483,GO:0071704,GO:0090304,GO:0140098,GO:0140101,GO:1901360 - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006823 453.0
DYD1_k127_6597127_5 - - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005768 353.0
DYD1_k127_6597127_6 Protein of unknown function (DUF541) K09807 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000001448 293.0
DYD1_k127_6597127_7 phosphoribosyltransferases K04096,K07100 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000174 282.0
DYD1_k127_6597127_9 Ribosome biogenesis protein, C-terminal K09140 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000001437 274.0
DYD1_k127_6730770_0 RNA-metabolising metallo-beta-lactamase K07041 - - 1.511e-309 957.0
DYD1_k127_6730770_1 phenylalanyl-tRNA synthetase, beta subunit K01890 - 6.1.1.20 2.049e-252 789.0
DYD1_k127_6730770_10 RNA-binding protein contains TRAM domain - - - 0.000000000000000000000000001769 118.0
DYD1_k127_6730770_11 Domain of unknown function (DUF1731) K07071 - - 0.0000000008822 64.0
DYD1_k127_6730770_12 Pfam:DUF552 K09152 - - 0.00000004816 58.0
DYD1_k127_6730770_2 Belongs to the class-I aminoacyl-tRNA synthetase family K01867 - 6.1.1.2 1.762e-237 736.0
DYD1_k127_6730770_3 Thiamine biosynthesis protein (ThiI) - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002783 578.0
DYD1_k127_6730770_4 Catalyzes the NAD(P)H-dependent reduction of dihydroxyacetonephosphate (DHAP or glycerone phosphate) to glycerol 1-phosphate (G1P). The G1P thus generated is used as the glycerophosphate backbone of phospholipids in the cellular membranes of Archaea K00096 - 1.1.1.261 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000136 549.0
DYD1_k127_6730770_5 Belongs to the class-II aminoacyl-tRNA synthetase family. Phe-tRNA synthetase alpha subunit type 2 subfamily K01889 GO:0003674,GO:0003824,GO:0004812,GO:0004826,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006082,GO:0006139,GO:0006399,GO:0006412,GO:0006418,GO:0006432,GO:0006518,GO:0006520,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0016070,GO:0016874,GO:0016875,GO:0019538,GO:0019752,GO:0034641,GO:0034645,GO:0034660,GO:0043038,GO:0043039,GO:0043043,GO:0043170,GO:0043436,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044281,GO:0044424,GO:0044464,GO:0046483,GO:0071704,GO:0090304,GO:0140098,GO:0140101,GO:1901360,GO:1901564,GO:1901566,GO:1901576 6.1.1.20 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006484 355.0
DYD1_k127_6730770_6 ferredoxin - - - 0.000000000000000000000000000000000000000000000000000000000001048 209.0
DYD1_k127_6730770_7 Cytidylyltransferase-like K02201 - 2.7.7.3 0.000000000000000000000000000000000000000000000000000000000001347 213.0
DYD1_k127_6730770_8 - - - - 0.00000000000000000000000000000000000000000000000000000003019 198.0
DYD1_k127_6730770_9 - - - - 0.00000000000000000000000000000000002749 136.0
DYD1_k127_6754175_0 Enoyl-(Acyl carrier protein) reductase - - - 1.415e-302 936.0
DYD1_k127_6754175_1 - - - - 0.0000000000000000000000000000000000000000004293 160.0
DYD1_k127_6754175_2 Cell division protein 48, CDC48, domain 2 K13525 - - 0.0000136 50.0
DYD1_k127_6754840_0 Belongs to the arginase family K01480 - 3.5.3.11 1.051e-232 721.0
DYD1_k127_6754840_1 Sodium:solute symporter family - - - 1.628e-225 709.0
DYD1_k127_6754840_10 - - - - 0.000000000000000000000000000000000000000000000000000000000000000005545 230.0
DYD1_k127_6754840_11 Hydrolyzes RNA 2',3'-cyclic phosphodiester to an RNA 2'- phosphomonoester K01975 - 3.1.4.58 0.000000000000000000000000000000000000000000000000000000000000004392 221.0
DYD1_k127_6754840_12 Ser thr protein kinase K07176 - - 0.00000000000000000000000000000000000000000000002684 180.0
DYD1_k127_6754840_13 - - - - 0.000000000000000000000000000000000000000000001824 168.0
DYD1_k127_6754840_15 Methyltransferase domain - - - 0.0000001585 62.0
DYD1_k127_6754840_2 Deoxyhypusine synthase K00809 - 2.5.1.46 1.637e-206 645.0
DYD1_k127_6754840_3 Arsenical pump membrane protein - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003556 613.0
DYD1_k127_6754840_4 Catalyzes the addition and repair of the essential 3'- terminal CCA sequence in tRNAs without using a nucleic acid template. Adds these three nucleotides in the order of C, C, and A to the tRNA nucleotide-73, using CTP and ATP as substrates and producing inorganic pyrophosphate K07558 - 2.7.7.72 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001852 551.0
DYD1_k127_6754840_5 Deoxyhypusine synthase K00809 - 2.5.1.46 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003505 533.0
DYD1_k127_6754840_6 One of the primary rRNA binding proteins. Required for association of the 30S and 50S subunits to form the 70S ribosome, for tRNA binding and peptide bond formation. It has been suggested to have peptidyltransferase activity K02886 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003124 438.0
DYD1_k127_6754840_7 TIGRFAM ParB RepB Spo0J family partition protein K03497 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001525 379.0
DYD1_k127_6754840_8 COG0122 3-methyladenine DNA glycosylase 8-oxoguanine DNA glycosylase K01247 - 3.2.2.21 0.000000000000000000000000000000000000000000000000000000000000000000000000000006163 266.0
DYD1_k127_6754988_0 Catalyzes the conversion of inosine 5'-phosphate (IMP) to xanthosine 5'-phosphate (XMP), the first committed and rate- limiting step in the de novo synthesis of guanine nucleotides, and therefore plays an important role in the regulation of cell growth K00088 - 1.1.1.205 1.317e-263 816.0
DYD1_k127_6754988_1 Pterin binding enzyme K00796 - 2.5.1.15 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007291 376.0
DYD1_k127_6754988_3 Pkd domain containing protein - - - 0.000004234 58.0
DYD1_k127_6755109_0 Cell division protein 48 (CDC48), domain 2 K13525 - - 0.0 1371.0
DYD1_k127_6755109_1 Specifically catalyzes the decarboxylation of meso- diaminopimelate (meso-DAP) to L-lysine K01581,K01586,K13747 - 4.1.1.17,4.1.1.20,4.1.1.96 2.692e-254 788.0
DYD1_k127_6755109_10 Acylphosphatase K01512 - 3.6.1.7 0.00000000000000000000000000006888 117.0
DYD1_k127_6755109_11 PFAM blue (type 1) copper domain protein - - - 0.0000000000000000001007 97.0
DYD1_k127_6755109_12 COG1653 ABC-type sugar transport system, periplasmic component K02027 - - 0.00000121 61.0
DYD1_k127_6755109_2 IGPS catalyzes the conversion of PRFAR and glutamine to IGP, AICAR and glutamate. The HisF subunit catalyzes the cyclization activity that produces IGP and AICAR from PRFAR using the ammonia provided by the HisH subunit K02500 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001646 464.0
DYD1_k127_6755109_3 Prephenate dehydratase K04518 - 4.2.1.51 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002429 375.0
DYD1_k127_6755109_4 1-(5-phosphoribosyl)-5- (5-phosphoribosylamino)methylideneamino imidazole-4-carboxamide isomerase K01814 - 5.3.1.16 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000002452 292.0
DYD1_k127_6755109_5 Non-catalytic component of the exosome, which is a complex involved in RNA degradation. Increases the RNA binding and the efficiency of RNA degradation. Helpful for the interaction of the exosome with A-poor RNAs K07573 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000003257 277.0
DYD1_k127_6755109_6 calcium- and calmodulin-responsive adenylate cyclase activity - - - 0.0000000000000000000000000000000000000000000000000000000007613 217.0
DYD1_k127_6755109_7 - - - - 0.000000000000000000000000000000000000000000000001217 178.0
DYD1_k127_6755109_8 Pyridoxamine 5'-phosphate oxidase K07006 - - 0.00000000000000000000000000000000005987 138.0
DYD1_k127_6755109_9 - - - - 0.0000000000000000000000000000003547 125.0
DYD1_k127_6766608_0 Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family K05830 - - 8.597e-223 695.0
DYD1_k127_6766608_1 Relaxes both positive and negative superturns and exhibits a strong decatenase activity K03166 - 5.99.1.3 1.378e-206 646.0
DYD1_k127_6766608_2 Tyrosine--tRNA ligase K01866 - 6.1.1.1 9.141e-197 616.0
DYD1_k127_6766608_3 Involved in both the arginine and lysine biosynthetic pathways. Phosphorylates the LysW-bound precursors glutamate (for arginine biosynthesis), respectively alpha-aminoadipate (for lysine biosynthesis) K05828 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005199 491.0
DYD1_k127_6766608_4 Relaxes both positive and negative superturns and exhibits a strong decatenase activity K03167 - 5.99.1.3 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007688 343.0
DYD1_k127_6766608_5 Protein of unknown function DUF45 K07043 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000008079 289.0
DYD1_k127_6766608_6 - - - - 0.000000000000000000000000000000000000000000000000000000000003655 209.0
DYD1_k127_6766608_7 helix_turn_helix ASNC type - - - 0.00000000000000000000000000000000000000004863 155.0
DYD1_k127_6766608_8 Belongs to the NAGSA dehydrogenase family. Type 1 subfamily. LysY sub-subfamily K05829 - - 0.00000000000000007427 81.0
DYD1_k127_6798635_0 including yeast histone deacetylase and acetoin utilization protein K04768 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006033 467.0
DYD1_k127_6798635_1 Proline dehydrogenase K00318 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004467 429.0
DYD1_k127_6798635_2 Alpha beta hydrolase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005583 353.0
DYD1_k127_6798635_3 Inositol monophosphatase K01092 - 3.1.3.25 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005081 329.0
DYD1_k127_6798635_4 zinc finger K03498 - - 0.000000000000000000000000000000000000000000000000000000000000000000004694 241.0
DYD1_k127_6798635_5 Chaperone protein DNAj K03686 - - 0.0000000000000001275 87.0
DYD1_k127_6798635_6 integrase family - - - 0.00000000002544 70.0
DYD1_k127_6804855_0 DNA polymerase K02319 - 2.7.7.7 0.0 1082.0
DYD1_k127_6804855_1 Domain of unknown function DUF87 K06915 - - 3.149e-245 764.0
DYD1_k127_6804855_2 FAD dependent oxidoreductase K15736 - - 5.878e-211 662.0
DYD1_k127_6804855_3 NurA - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001218 337.0
DYD1_k127_6804855_4 DNA polymerase K02319 - 2.7.7.7 0.000000000000000000000000000000000000000000000000000000000000000000008129 237.0
DYD1_k127_6877655_0 Predicted membrane protein (DUF2070) K08979 - - 7.006e-211 670.0
DYD1_k127_6877655_1 Stabilizes TBP binding to an archaeal box-A promoter. Also responsible for recruiting RNA polymerase II to the pre- initiation complex (DNA-TBP-TFIIB) K03124 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002132 587.0
DYD1_k127_6877655_10 Sjogren's syndrome/scleroderma autoantigen 1 (Autoantigen p27) K07143 - - 0.000000000000000000000000007948 113.0
DYD1_k127_6877655_12 - - - - 0.000000000000000000001968 102.0
DYD1_k127_6877655_13 Sec61beta family - - - 0.0000000000000000001648 89.0
DYD1_k127_6877655_15 - - - - 0.00000006349 57.0
DYD1_k127_6877655_2 Uncharacterised protein family UPF0052 K11212 - 2.7.8.28 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001143 366.0
DYD1_k127_6877655_3 Ribose 5-phosphate isomerase K01807 - 5.3.1.6 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000585 318.0
DYD1_k127_6877655_4 Amidohydrolase family K01464 - 3.5.2.2 0.000000000000000000000000000000000000000000000000000000000000000000000000000003487 263.0
DYD1_k127_6877655_5 - - - - 0.00000000000000000000000000000000000000000000000000000000000000002588 229.0
DYD1_k127_6877655_6 Belongs to the SUI1 family K03113 - - 0.0000000000000000000000000000000000000000000000000000003015 194.0
DYD1_k127_6877655_7 Guanylyl transferase CofC like K14941 - 2.7.7.68 0.0000000000000000000000000000000000000000000000000003847 192.0
DYD1_k127_6877655_9 Large-conductance mechanosensitive channel, MscL K03282 - - 0.00000000000000000000000000000000000000005117 154.0
DYD1_k127_68855_0 RNA-metabolising metallo-beta-lactamase K07041 - - 0.0 1186.0
DYD1_k127_68855_1 Cell division protein 48 (CDC48), domain 2 K13525 - - 0.0 1185.0
DYD1_k127_68855_10 Part of the phosphoribosylformylglycinamidine synthase complex involved in the purines biosynthetic pathway. Catalyzes the ATP-dependent conversion of formylglycinamide ribonucleotide (FGAR) and glutamine to yield formylglycinamidine ribonucleotide (FGAM) and glutamate. The FGAM synthase complex is composed of three subunits. PurQ produces an ammonia molecule by converting glutamine to glutamate. PurL transfers the ammonia molecule to FGAR to form FGAM in an ATP-dependent manner. PurS interacts with PurQ and PurL and is thought to assist in the transfer of the ammonia molecule from PurQ to PurL K01952 - 6.3.5.3 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008032 419.0
DYD1_k127_68855_11 PFAM ABC-2 type transporter K01992 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001219 391.0
DYD1_k127_68855_12 biotin-(Acetyl-CoA-carboxylase) ligase K03524 - 6.3.4.15 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004495 379.0
DYD1_k127_68855_14 Transcriptional regulator - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000001439 297.0
DYD1_k127_68855_15 Domain in cystathionine beta-synthase and other proteins. - - - 0.0000000000000000000000000000000000000000000000000000000000000000000001153 241.0
DYD1_k127_68855_16 CoA binding domain K06929 - - 0.0000000000000000000000000000000000000000000000000000000001666 206.0
DYD1_k127_68855_17 - - - - 0.000000000000000000000000000000000000000000001065 166.0
DYD1_k127_68855_19 - - - - 0.00000000000000000000000000000000000000534 148.0
DYD1_k127_68855_2 Part of the phosphoribosylformylglycinamidine synthase complex involved in the purines biosynthetic pathway. Catalyzes the ATP-dependent conversion of formylglycinamide ribonucleotide (FGAR) and glutamine to yield formylglycinamidine ribonucleotide (FGAM) and glutamate. The FGAM synthase complex is composed of three subunits. PurQ produces an ammonia molecule by converting glutamine to glutamate. PurL transfers the ammonia molecule to FGAR to form FGAM in an ATP-dependent manner. PurS interacts with PurQ and PurL and is thought to assist in the transfer of the ammonia molecule from PurQ to PurL K01952 - 6.3.5.3 0.0 1166.0
DYD1_k127_68855_20 Part of the phosphoribosylformylglycinamidine synthase complex involved in the purines biosynthetic pathway. Catalyzes the ATP-dependent conversion of formylglycinamide ribonucleotide (FGAR) and glutamine to yield formylglycinamidine ribonucleotide (FGAM) and glutamate. The FGAM synthase complex is composed of three subunits. PurQ produces an ammonia molecule by converting glutamine to glutamate. PurL transfers the ammonia molecule to FGAR to form FGAM in an ATP-dependent manner. PurS interacts with PurQ and PurL and is thought to assist in the transfer of the ammonia molecule from PurQ to PurL K01952 - 6.3.5.3 0.00000000000000000000000000000000000003577 144.0
DYD1_k127_68855_21 - - - - 0.000000000000000000000000000000000001431 142.0
DYD1_k127_68855_26 Response regulator with CheY-like receiver, AAA-type ATPase, and DNA-binding domains - - - 0.000000000039 66.0
DYD1_k127_68855_27 Transcriptional regulator - - - 0.0000000001549 65.0
DYD1_k127_68855_28 Belongs to the UPF0147 family K09721 - - 0.0000000001711 62.0
DYD1_k127_68855_3 hydroxymethylglutaryl-CoA reductase (NADPH) activity K00021 - 1.1.1.34 0.0 1144.0
DYD1_k127_68855_4 Catalyzes the formation of phosphoribosylamine from phosphoribosylpyrophosphate (PRPP) and glutamine K00764 - 2.4.2.14 2.355e-272 842.0
DYD1_k127_68855_5 GTPase of unknown function C-terminal K06942 - - 3.201e-235 730.0
DYD1_k127_68855_6 Mannosyl-3-phosphoglycerate synthase K05947 GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0044424,GO:0044464 2.4.1.217 2.92e-208 653.0
DYD1_k127_68855_7 Peptidase family M50 - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000247 563.0
DYD1_k127_68855_8 ABC-type multidrug transport system ATPase component K01990 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001802 507.0
DYD1_k127_68855_9 MOFRL family K11529 - 2.7.1.165 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002023 467.0
DYD1_k127_6899530_0 CBS domain K03498 - - 2.922e-291 906.0
DYD1_k127_6899530_1 Luciferase-like monooxygenase K14728 - - 4.125e-215 670.0
DYD1_k127_6899530_2 DEAD DEAH box helicase K06877 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005068 514.0
DYD1_k127_6899530_3 exonuclease of the beta-lactamase fold involved in RNA processing K07577 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003679 490.0
DYD1_k127_6899530_4 major facilitator superfamily K08153,K08221 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004119 405.0
DYD1_k127_6899530_5 ubiE/COQ5 methyltransferase family K03183 - 2.1.1.163,2.1.1.201 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002104 363.0
DYD1_k127_6899530_6 phosphoribosylglycinamide formyltransferase K11175 - 2.1.2.2 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003051 332.0
DYD1_k127_6899530_7 - - - - 0.00000000000000000000005779 100.0
DYD1_k127_6899530_9 Malic enzyme, NAD binding domain K00027 - 1.1.1.38 0.00000000000001221 76.0
DYD1_k127_803489_0 Probable cobalt transporter subunit (CbtA) - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000001537 295.0
DYD1_k127_803489_1 Domain of unknown function (DUF4443) - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000003947 283.0
DYD1_k127_803489_2 Universal stress protein - - - 0.000000000000000000000000000000000004262 142.0
DYD1_k127_803489_3 - - - - 0.00000000000000000001415 106.0
DYD1_k127_803489_4 Probable cobalt transporter subunit (CbtB) - - - 0.000000000000000002093 86.0
DYD1_k127_803489_5 Iron-binding zinc finger CDGSH type K05710 - - 0.00000000000000001074 84.0
DYD1_k127_823788_0 Radical SAM - - - 0.0 1137.0
DYD1_k127_823788_1 Amino acid permease - - - 0.0 1070.0
DYD1_k127_823788_10 Catalyzes the ATP-dependent conversion of 7-carboxy-7- deazaguanine (CDG) to 7-cyano-7-deazaguanine (preQ(0)) K06920 - 6.3.4.20 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000239 301.0
DYD1_k127_823788_11 Essential cell division protein that forms a contractile ring structure (Z ring) at the future cell division site. The regulation of the ring assembly controls the timing and the location of cell division. One of the functions of the FtsZ ring is to recruit other cell division proteins to the septum to produce a new cell wall between the dividing cells. Binds GTP and shows GTPase activity K03531 GO:0000166,GO:0001882,GO:0001883,GO:0003674,GO:0003824,GO:0003924,GO:0005488,GO:0005525,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0008150,GO:0009987,GO:0016462,GO:0016787,GO:0016817,GO:0016818,GO:0017076,GO:0017111,GO:0019001,GO:0032153,GO:0032549,GO:0032550,GO:0032553,GO:0032555,GO:0032561,GO:0035639,GO:0036094,GO:0043167,GO:0043168,GO:0044424,GO:0044464,GO:0051301,GO:0097159,GO:0097367,GO:1901265,GO:1901363 - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000008472 296.0
DYD1_k127_823788_12 GTPase or GTP-binding protein K06947 GO:0003674,GO:0003824,GO:0006139,GO:0006396,GO:0006725,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0009987,GO:0010467,GO:0016070,GO:0016301,GO:0016310,GO:0016740,GO:0016772,GO:0016773,GO:0019205,GO:0034641,GO:0043170,GO:0044237,GO:0044238,GO:0046483,GO:0051731,GO:0071704,GO:0090304,GO:1901360 - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000002773 283.0
DYD1_k127_823788_13 Metal dependent phosphohydrolases with conserved 'HD' motif. K06950 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000002249 268.0
DYD1_k127_823788_14 - - - - 0.0000000000000000000000000000000000000000000000000000008073 194.0
DYD1_k127_823788_15 PFAM type II secretion system K07333 - - 0.0000000000000000000000000000000000000000000000005188 194.0
DYD1_k127_823788_16 - - - - 0.000000000000000000000000000000000000001889 149.0
DYD1_k127_823788_17 TIGRFAM Mannose-1-phosphate guanylyltransferase mannose-6-phosphate isomerase K00971,K16011 - 2.7.7.13,5.3.1.8 0.000000000000000000000000000000000000001981 150.0
DYD1_k127_823788_19 Transcriptional regulator - - - 0.00000000000000000000000000005161 120.0
DYD1_k127_823788_2 Relaxes both positive and negative superturns and exhibits a strong decatenase activity K03167 - 5.99.1.3 6.881e-219 687.0
DYD1_k127_823788_20 Sugar efflux transporter for intercellular exchange K15383 - - 0.0000000000000000000000000001794 118.0
DYD1_k127_823788_21 NADPH-dependent F420 reductase K06988 - 1.5.1.40 0.0000000000000000000003186 96.0
DYD1_k127_823788_26 NADP oxidoreductase coenzyme F420-dependent - - - 0.000000009078 57.0
DYD1_k127_823788_27 TIGRFAM archaeal flagellin N-terminal-like domain - - - 0.0000000479 60.0
DYD1_k127_823788_28 NADPH-dependent F420 reductase K06988 - 1.5.1.40 0.0000007588 51.0
DYD1_k127_823788_29 - - - - 0.0000893 47.0
DYD1_k127_823788_3 Catalyzes the conversion of dihydroorotate to orotate K00226,K00254,K17723,K17828 GO:0003674,GO:0003824,GO:0004152,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006139,GO:0006206,GO:0006207,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009112,GO:0009987,GO:0016491,GO:0016627,GO:0016635,GO:0018130,GO:0019856,GO:0034641,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0044424,GO:0044464,GO:0046112,GO:0046483,GO:0055086,GO:0055114,GO:0071704,GO:0072527,GO:0072528,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576 1.3.1.1,1.3.1.14,1.3.5.2,1.3.98.1 1.669e-196 617.0
DYD1_k127_823788_4 PFAM Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase K07709 - 2.7.13.3 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009923 594.0
DYD1_k127_823788_5 COG0630 Type IV secretory pathway, VirB11 components, and related ATPases involved in archaeal flagella biosynthesis K07332 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001288 520.0
DYD1_k127_823788_6 ABC-type transport system, periplasmic component surface lipoprotein K02058,K07335 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001056 490.0
DYD1_k127_823788_7 6-pyruvoyl tetrahydropterin synthase K01737 - 4.1.2.50,4.2.3.12 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005219 454.0
DYD1_k127_823788_8 Protein of unknown function DUF72 - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002379 376.0
DYD1_k127_823788_9 Asparagine synthase K01953 - 6.3.5.4 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001068 319.0
DYD1_k127_848499_0 Sodium:sulfate symporter transmembrane region K14445 - - 6.185e-196 623.0
DYD1_k127_848499_1 PFAM Alcohol dehydrogenase GroES-like domain K00001,K13953,K18382 - 1.1.1.1 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003667 523.0
DYD1_k127_848499_2 COG0589 Universal stress protein UspA and related nucleotide-binding proteins K20989 - - 0.000000000000000000000000000000002216 134.0
DYD1_k127_848499_3 Sodium/calcium exchanger protein K07301 - - 0.0000000000000000000000000000008179 134.0
DYD1_k127_848499_4 COG0589 Universal stress protein UspA and related nucleotide-binding proteins K20989 - - 0.00000000000000000000000000001253 123.0
DYD1_k127_848499_5 Signal transduction protein with CBS domains - - - 0.000008911 52.0
DYD1_k127_848499_6 CBS domain - - - 0.00004721 48.0
DYD1_k127_883272_0 Hydroxymethylglutaryl-coenzyme A synthase N terminal K01641 - 2.3.3.10 4.903e-270 834.0
DYD1_k127_883272_1 Rhodanese Homology Domain K01011 - 2.8.1.1,2.8.1.2 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002316 548.0
DYD1_k127_883272_10 Destroys radicals which are normally produced within the cells and which are toxic to biological systems K04564 - 1.15.1.1 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006303 386.0
DYD1_k127_883272_11 DNA-directed RNA polymerase, alpha subunit 40 kD subunit K03047 - 2.7.7.6 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004264 382.0
DYD1_k127_883272_12 - - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001661 368.0
DYD1_k127_883272_13 Catalyzes the anaerobic formation of alpha-ketobutyrate and ammonia from threonine in a two-step reaction. The first step involved a dehydration of threonine and a production of enamine intermediates (aminocrotonate), which tautomerizes to its imine form (iminobutyrate). Both intermediates are unstable and short- lived. The second step is the nonenzymatic hydrolysis of the enamine imine intermediates to form 2-ketobutyrate and free ammonia. In the low water environment of the cell, the second step is accelerated by RidA K01754 - 4.3.1.19 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003634 366.0
DYD1_k127_883272_14 Shwachman-Bodian-Diamond syndrome (SBDS) protein K14574 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005529 355.0
DYD1_k127_883272_15 ERCC4 domain K10848 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001169 340.0
DYD1_k127_883272_16 PFAM Nitroreductase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007314 338.0
DYD1_k127_883272_17 Involved in the regulation of the intracellular balance of NAD and NADP, and is a key enzyme in the biosynthesis of NADP. Catalyzes specifically the phosphorylation on 2'-hydroxyl of the adenosine moiety of NAD to yield NADP K00858 - 2.7.1.23 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004423 333.0
DYD1_k127_883272_19 Protein of unknown function (DUF432) K09149 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000007806 287.0
DYD1_k127_883272_2 Major facilitator superfamily - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005517 529.0
DYD1_k127_883272_20 ferredoxin - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000004021 281.0
DYD1_k127_883272_21 This protein is one of the early assembly proteins of the 50S ribosomal subunit, although it is not seen to bind rRNA by itself. It is important during the early stages of 50S assembly K02871 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000003002 248.0
DYD1_k127_883272_22 Molecular chaperone capable of stabilizing a range of proteins. Seems to fulfill an ATP-independent, HSP70-like function in archaeal de novo protein folding K04798 - - 0.00000000000000000000000000000000000000000000000000000002149 199.0
DYD1_k127_883272_23 PIN domain of ribonuclease K07060 - - 0.00000000000000000000000000000000000000000000000000000004458 200.0
DYD1_k127_883272_24 - - - - 0.00000000000000000000000000000000000000000000000000003751 189.0
DYD1_k127_883272_25 Belongs to the universal ribosomal protein uS9 family K02996 - - 0.000000000000000000000000000000000000000000000000002202 186.0
DYD1_k127_883272_27 Domain of unknown function (DUF2024) - - - 0.0000000000000000000000000000000000000000000002607 167.0
DYD1_k127_883272_28 Methyltransferase type 11 - - - 0.00000000000000000000000000000000000000000000544 174.0
DYD1_k127_883272_29 - - - - 0.00000000000000000000000000000000000000000009801 161.0
DYD1_k127_883272_3 - - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001738 479.0
DYD1_k127_883272_30 Ribosomal L37ae protein family K02921 - - 0.0000000000000000000000000000000000009139 139.0
DYD1_k127_883272_31 Pyridoxamine 5'-phosphate oxidase - - - 0.00000000000000000000000000000000001072 140.0
DYD1_k127_883272_32 AhpC/TSA family - - - 0.00000000000000000000000000007835 119.0
DYD1_k127_883272_33 COG0454 Histone acetyltransferase HPA2 and related acetyltransferases - - - 0.0000000000000000000000000002209 121.0
DYD1_k127_883272_34 PFAM AhpC TSA family - - - 0.0000000000000000134 86.0
DYD1_k127_883272_36 AhpC/TSA family - - - 0.000000000000172 70.0
DYD1_k127_883272_37 COG4618 ABC-type protease lipase transport system, ATPase and permease components - - - 0.000000001446 66.0
DYD1_k127_883272_38 Thioredoxin-like - GO:0002576,GO:0005575,GO:0005576,GO:0005622,GO:0005623,GO:0005737,GO:0006810,GO:0006887,GO:0008150,GO:0009987,GO:0012505,GO:0016192,GO:0030141,GO:0031091,GO:0031093,GO:0031410,GO:0031974,GO:0031982,GO:0031983,GO:0032940,GO:0034774,GO:0043226,GO:0043227,GO:0043229,GO:0043233,GO:0044422,GO:0044424,GO:0044433,GO:0044444,GO:0044446,GO:0044464,GO:0045055,GO:0046903,GO:0051179,GO:0051234,GO:0060205,GO:0070013,GO:0097708,GO:0099503 - 0.0000000041 61.0
DYD1_k127_883272_4 Catalytic component of the exosome, which is a complex involved in RNA degradation. Has 3'- 5' exoribonuclease activity. Can also synthesize heteropolymeric RNA-tails K11600 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000143 454.0
DYD1_k127_883272_5 Non-catalytic component of the exosome, which is a complex involved in RNA degradation. Contributes to the structuring of the Rrp41 active site K12589 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008402 445.0
DYD1_k127_883272_6 Putative zinc- or iron-chelating domain K06940 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001064 422.0
DYD1_k127_883272_7 Mechanosensitive ion channel - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002284 423.0
DYD1_k127_883272_8 Non-catalytic component of the exosome, which is a complex involved in RNA degradation. Increases the RNA binding and the efficiency of RNA degradation. Confers strong poly(A) specificity to the exosome K03679 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003272 413.0
DYD1_k127_883272_9 PFAM Adenylate and Guanylate cyclase catalytic domain K01768 - 4.6.1.1 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006469 403.0
DYD1_k127_884616_0 Protein of unknown function (DUF521) K09123 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003708 585.0
DYD1_k127_884616_1 PP-loop family - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004325 497.0
DYD1_k127_884616_2 DNA repair enzyme that has both DNA N-glycosylase activity and AP-lyase activity. The DNA N-glycosylase activity releases various damaged pyrimidines from DNA by cleaving the N- glycosidic bond, leaving an AP (apurinic apyrimidinic) site. The AP-lyase activity cleaves the phosphodiester bond 3' to the AP site by a beta-elimination, leaving a 3'-terminal unsaturated sugar and a product with a terminal 5'-phosphate K10773 - 4.2.99.18 0.00000000000000000000000000000000000000000000000000000000000000000000000000002988 261.0
DYD1_k127_884616_3 Protein of unknown function DUF126 K09128 - - 0.0000000000000000000000000000000000000000000000002321 179.0
DYD1_k127_884616_4 - - - - 0.00000000000000000000000000000001021 127.0
DYD1_k127_884616_5 DUF167 K09131 - - 0.000000000000000000000004433 103.0
DYD1_k127_884616_6 ASNC family K03718 - - 0.00000000000000000000007964 104.0
DYD1_k127_884616_7 Winged helix-turn-helix - - - 0.000003484 53.0
DYD1_k127_925302_0 Is involved in the reduction of 2,3- digeranylgeranylglycerophospholipids (unsaturated archaeols) into 2,3-diphytanylglycerophospholipids (saturated archaeols) in the biosynthesis of archaeal membrane lipids. Catalyzes the formation of archaetidic acid (2,3-di-O-phytanyl-sn-glyceryl phosphate) from 2,3-di-O-geranylgeranylglyceryl phosphate (DGGGP) via the hydrogenation of each double bond of the isoprenoid chains - - - 5.023e-277 855.0
DYD1_k127_925302_1 Belongs to the sulfate adenylyltransferase family K00958 - 2.7.7.4 1.775e-198 623.0
DYD1_k127_925302_10 - - - - 0.00000000000000000000000000000000000008012 145.0
DYD1_k127_925302_11 Cyclophilin-like K09143 - - 0.00000000000000000000000000000000004349 136.0
DYD1_k127_925302_12 metallopeptidase activity - - - 0.000000000000001818 90.0
DYD1_k127_925302_2 Synthesizes selenophosphate from selenide and ATP K01008 - 2.7.9.3 5.694e-194 615.0
DYD1_k127_925302_3 Phosphoadenosine phosphosulfate reductase family K00390 - 1.8.4.10,1.8.4.8 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000459 426.0
DYD1_k127_925302_4 hydrolase (HAD superfamily) K01091,K01560,K01561,K07025 - 3.1.3.18,3.8.1.2,3.8.1.3 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004358 327.0
DYD1_k127_925302_5 Translin family K07477 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000914 301.0
DYD1_k127_925302_6 A structure-specific endonuclease that resolves Holliday junction (HJ) intermediates during genetic recombination. Cleaves 4-way DNA junctions introducing paired nicks in opposing strands, leaving a 5'-terminal phosphate and a 3'-terminal hydroxyl group that are ligated to produce recombinant products - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000156 248.0
DYD1_k127_925302_7 conserved repeat domain protein - - - 0.00000000000000000000000000000000000000000000000000000000000002075 237.0
DYD1_k127_925302_8 HIT domain K02503 - - 0.00000000000000000000000000000000000000000000000000000000000008875 215.0
DYD1_k127_925302_9 Peptidase A24A, prepilin type IV K02278,K07991 - 3.4.23.43,3.4.23.52 0.0000000000000000000000000000000000000000001125 167.0
DYD1_k127_935459_0 Phosphate uptake regulator - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001227 576.0
DYD1_k127_935459_1 GTPase that associates with the 50S ribosomal subunit and may have a role during protein synthesis or ribosome biogenesis K03665 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001666 530.0
DYD1_k127_935459_10 regulatory protein, arsR - - - 0.0000000000000000000000000000000000000000000003749 168.0
DYD1_k127_935459_11 COG0346 Lactoylglutathione lyase and related lyases K07032 - - 0.00000000000000000000000000000000000000000004684 163.0
DYD1_k127_935459_12 - - - - 0.000000000000000000000000000000000000001977 149.0
DYD1_k127_935459_13 H subunit K02107 - - 0.00000000000000000000000000000000008799 140.0
DYD1_k127_935459_14 Activator of Hsp90 ATPase - - - 0.0000000000000000000000000000252 122.0
DYD1_k127_935459_16 Transcriptional regulator - - - 0.00000000000003626 76.0
DYD1_k127_935459_17 - - - - 0.0000323 51.0
DYD1_k127_935459_2 Specifically catalyzes the AdoMet-dependent 2'-O-ribose methylation of cytidine at position 56 in tRNAs K07254 - 2.1.1.206 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000003322 291.0
DYD1_k127_935459_4 - - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000003815 255.0
DYD1_k127_935459_5 3-demethylubiquinone-9 3-methyltransferase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000005008 248.0
DYD1_k127_935459_6 Patch-forming domain C2 of tRNA-guanine transglycosylase K07398 - - 0.0000000000000000000000000000000000000000000000000000000000000000000537 234.0
DYD1_k127_935459_7 transcription factor, homolog of eukaryotic MBF1 K03627 - - 0.00000000000000000000000000000000000000000000000000000005487 198.0
DYD1_k127_935459_8 Activator of Hsp90 ATPase - - - 0.00000000000000000000000000000000000000000000000001994 185.0
DYD1_k127_935459_9 Contacts the emerging nascent chain on the ribosome K03626 - - 0.00000000000000000000000000000000000000000000000006105 179.0
DYD1_k127_947892_1 Allows the formation of correctly charged Gln-tRNA(Gln) through the transamidation of misacylated Glu-tRNA(Gln) in organisms which lack glutaminyl-tRNA synthetase. The reaction takes place in the presence of glutamine and ATP through an activated gamma-phospho-Glu-tRNA(Gln) K02433 - 6.3.5.6,6.3.5.7 5.266e-247 768.0
DYD1_k127_947892_2 Aspartyl-tRNA synthetase with relaxed tRNA specificity since it is able to aspartylate not only its cognate tRNA(Asp) but also tRNA(Asn). Reaction proceeds in two steps L-aspartate is first activated by ATP to form Asp-AMP and then transferred to the acceptor end of tRNA(Asp Asn) K09759 - 6.1.1.23 8.22e-247 767.0
DYD1_k127_947892_4 Allows the formation of correctly charged Asn-tRNA(Asn) or Gln-tRNA(Gln) through the transamidation of misacylated Asp- tRNA(Asn) or Glu-tRNA(Gln) in organisms which lack either or both of asparaginyl-tRNA or glutaminyl-tRNA synthetases. The reaction takes place in the presence of glutamine and ATP through an activated phospho-Asp-tRNA(Asn) or phospho-Glu-tRNA(Gln) K02434 - 6.3.5.6,6.3.5.7 0.000000000000000000000000000000000000000000772 160.0
DYD1_k127_947892_5 Allows the formation of correctly charged Asn-tRNA(Asn) or Gln-tRNA(Gln) through the transamidation of misacylated Asp- tRNA(Asn) or Glu-tRNA(Gln) in organisms which lack either or both of asparaginyl-tRNA or glutaminyl-tRNA synthetases. The reaction takes place in the presence of glutamine and ATP through an activated phospho-Asp-tRNA(Asn) or phospho-Glu-tRNA(Gln) K02435 - 6.3.5.6,6.3.5.7 0.00000000000000000000000000000000002165 136.0
DYD1_k127_947892_6 Protein of unknown function (DUF1326) - - - 0.0000000000000001894 81.0
DYD1_k127_947892_7 Tetratricopeptide repeat - - - 0.0000001234 56.0
DYD1_k127_947892_8 ATPase, AAA superfamily K07052 - - 0.0000001267 58.0
DYD1_k127_947892_9 protein secretion by the type IV secretion system - - - 0.000004374 58.0
DYD1_k127_951570_0 Catalyzes the ATP-dependent amidation of deamido-NAD to form NAD. Uses ammonia as a nitrogen source K01916 - 6.3.1.5 0.0000000000000000000000000000000000000000000000000000000000000000000000000001333 265.0
DYD1_k127_951570_1 COG0226 ABC-type phosphate transport system, periplasmic component K02040 - - 0.000000000000000000000000000000000000000000000000000000000000005368 229.0
DYD1_k127_969660_0 PFAM aminotransferase class-III K01845 - 5.4.3.8 3.892e-210 659.0
DYD1_k127_969660_1 Tetrapolymerization of the monopyrrole PBG into the hydroxymethylbilane pre-uroporphyrinogen in several discrete steps K01749 - 2.5.1.61 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001649 522.0
DYD1_k127_969660_2 Belongs to the precorrin methyltransferase family K02303 - 2.1.1.107 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000116 292.0
DYD1_k127_969660_3 Uroporphyrinogen-III synthase HemD K01719 - 4.2.1.75 0.000000000000000000000000000000000000000000000000000000000000000000000000000008061 268.0
DYD1_k127_969660_4 - - - - 0.000000000000000000000000000000000000000000000000000000000000000003557 229.0
DYD1_k127_969660_5 - - - - 0.000000000000000000000000000000000000000000000000000000000007864 214.0
DYD1_k127_969660_6 - - - - 0.0000000000000000000000000000000001465 142.0
DYD1_k127_969660_7 Transcriptional regulator - - - 0.000000000000000000006207 95.0