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Overview

ID MAG00842
Name DYD1_bin.2
Sample SMP0025
Taxonomy
Kingdom Bacteria
Phylum Bacteroidota
Class Bacteroidia
Order Chitinophagales
Family Chitinophagaceae
Genus UTBCD1
Species
Assembly information
Completeness (%) 70.68
Contamination (%) 2.12
GC content (%) 39.0
N50 (bp) 3,358
Genome size (bp) 2,488,391

Location

Module

Module ID Module name Total genes Total steps Contain genes Contain steps Percentage of genes Percentage of steps

Genes2698

Gene name Description KEGG GOs EC E-value Score Sequence
DYD1_k127_101192_0 Psort location Cytoplasmic, score - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008213 430.0
DYD1_k127_101192_1 Steryl acetyl hydrolase K14731 - 3.1.1.83 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000002552 283.0
DYD1_k127_101192_2 CDP-alcohol phosphatidyltransferase K00995 - 2.7.8.5 0.0000000000000000000000000000000000000000000000000000000000000004931 225.0
DYD1_k127_101192_3 DegT/DnrJ/EryC1/StrS aminotransferase family K00812 - 2.6.1.1 0.000000000000000000000000000000000000000000009007 164.0
DYD1_k127_101192_4 ParE toxin of type II toxin-antitoxin system, parDE - - - 0.00000000000000000002539 93.0
DYD1_k127_101192_5 Psort location CytoplasmicMembrane, score - - - 0.0000001584 60.0
DYD1_k127_102009_0 Threonine aldolase K01620 - 4.1.2.48 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008956 471.0
DYD1_k127_102009_1 Belongs to the GPI family K01810 - 5.3.1.9 0.0000000000000000000000000000000000000000000000000000001807 197.0
DYD1_k127_102009_2 Regulator of cell autolysis - - - 0.000000000000000000000000000000000000000000000001715 187.0
DYD1_k127_1027290_0 Transposase IS200 like K07491 - - 0.000000000000000000000000000000000000000000000001026 177.0
DYD1_k127_1027290_1 ubiE/COQ5 methyltransferase family - - - 0.000000000000000000000000000000000000000001424 162.0
DYD1_k127_1031661_0 PFAM Peptidase M22, glycoprotease K14742 - - 0.000000000000000000000000000000000000000000000000000000000000009594 223.0
DYD1_k127_1031661_1 COGs COG0491 Zn-dependent hydrolase including glyoxylase - - - 0.00000000000000000000000000000000000000000000001378 173.0
DYD1_k127_1031661_2 helix_turn_helix, Arsenical Resistance Operon Repressor - - - 0.000000000000000000000000000000000000000000006884 164.0
DYD1_k127_1031661_3 3-hydroxyacyl-CoA dehydrogenase K00074,K17735 - 1.1.1.108,1.1.1.157 0.00000000000000000000000000000000000000000003764 168.0
DYD1_k127_103296_0 - - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000006377 291.0
DYD1_k127_103296_1 Belongs to the MtfA family K09933 - - 0.000000000000000000000000000000000000000000000000000000000000002939 226.0
DYD1_k127_103296_2 - - - - 0.00000000000000001009 87.0
DYD1_k127_103296_3 Has lipid A 3-O-deacylase activity. Hydrolyzes the ester bond at the 3 position of lipid A, a bioactive component of lipopolysaccharide (LPS), thereby releasing the primary fatty acyl moiety K12976,K21572 - - 0.0000168 47.0
DYD1_k127_1050901_0 Belongs to the UPF0234 family K09767 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000004073 253.0
DYD1_k127_1050901_1 TonB-dependent receptor - - - 0.000000000000000000000000000000000000000000000000000000000000000000001045 242.0
DYD1_k127_1050901_2 Ribosomal protein L31 K02909 - - 0.000000000000000000000000000000000000000000009539 162.0
DYD1_k127_1050901_3 Late embryogenesis abundant protein - - - 0.000000000000000008817 89.0
DYD1_k127_1050901_4 glucose-1-phosphate thymidylyltransferase - - - 0.0000000002539 66.0
DYD1_k127_1064198_0 Glycosyltransferase family 9 (heptosyltransferase) - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005649 318.0
DYD1_k127_1064198_1 Glycosyl transferases group 1 - - - 0.000000000000000000000000000000000000000000000000000000000005039 216.0
DYD1_k127_1065811_0 amine dehydrogenase activity - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002008 444.0
DYD1_k127_106583_0 The RuvA-RuvB complex in the presence of ATP renatures cruciform structure in supercoiled DNA with palindromic sequence, indicating that it may promote strand exchange reactions in homologous recombination. RuvAB is a helicase that mediates the Holliday junction migration by localized denaturation and reannealing K03551 - 3.6.4.12 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000152 572.0
DYD1_k127_106583_1 COG0745 Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006416 430.0
DYD1_k127_106583_2 NmrA-like family - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005332 334.0
DYD1_k127_106583_3 NADP oxidoreductase coenzyme F420-dependent K06988 - 1.5.1.40 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000236 316.0
DYD1_k127_106583_4 PFAM Peptidase family M23 - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000002935 282.0
DYD1_k127_106583_5 Belongs to the class-I aminoacyl-tRNA synthetase family K01869 GO:0003674,GO:0003824,GO:0004812,GO:0004823,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006082,GO:0006139,GO:0006399,GO:0006412,GO:0006418,GO:0006429,GO:0006518,GO:0006520,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0016070,GO:0016874,GO:0016875,GO:0019538,GO:0019752,GO:0034641,GO:0034645,GO:0034660,GO:0043038,GO:0043039,GO:0043043,GO:0043170,GO:0043436,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044281,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0071704,GO:0090304,GO:0140098,GO:0140101,GO:1901360,GO:1901564,GO:1901566,GO:1901576 6.1.1.4 0.000000000000000000000000000000000000000000000000005531 182.0
DYD1_k127_1067270_0 Converts 2,5-diamino-6-(ribosylamino)-4(3h)-pyrimidinone 5'-phosphate into 5-amino-6-(ribosylamino)-2,4(1h,3h)- pyrimidinedione 5'-phosphate K11752 - 1.1.1.193,3.5.4.26 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000008732 293.0
DYD1_k127_1075694_0 Aminotransferase class I and II K10206,K14261 - 2.6.1.83 0.0000000000000000000000000000000000000000000000000000000000000000000000000000004782 267.0
DYD1_k127_1075694_1 Belongs to the sigma-70 factor family. ECF subfamily - - - 0.000000000000000000002944 94.0
DYD1_k127_1079943_0 Adenylyl- / guanylyl cyclase, catalytic domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005643 527.0
DYD1_k127_1079943_1 Histidine kinase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001136 436.0
DYD1_k127_1079943_2 cheY-homologous receiver domain - - - 0.0000000000000000000000000000000000000000000000000000009301 194.0
DYD1_k127_1079943_3 protein conserved in bacteria (DUF2179) - - - 0.000000000000000000257 89.0
DYD1_k127_1083336_0 Ammonium Transporter K03320 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008355 583.0
DYD1_k127_1083336_1 Permease - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000323 334.0
DYD1_k127_1084038_0 DNA-directed DNA polymerase K02337 - 2.7.7.7 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001465 592.0
DYD1_k127_1092509_0 The transhydrogenation between NADH and NADP is coupled to respiration and ATP hydrolysis and functions as a proton pump across the membrane K00325 - 1.6.1.2 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001445 579.0
DYD1_k127_1092509_1 4TM region of pyridine nucleotide transhydrogenase, mitoch K00324 - 1.6.1.2 0.0000000000000000000000000000000002997 133.0
DYD1_k127_110048_0 With LigD forms a non-homologous end joining (NHEJ) DNA repair enzyme, which repairs dsDNA breaks with reduced fidelity. Binds linear dsDNA with 5'- and 3'- overhangs but not closed circular dsDNA nor ssDNA. Recruits and stimulates the ligase activity of LigD K10979 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001221 380.0
DYD1_k127_110048_1 UPF0391 membrane protein - - - 0.00000000000000006654 81.0
DYD1_k127_110048_2 ATP dependent DNA ligase C terminal region K01971 - 6.5.1.1 0.000000005707 57.0
DYD1_k127_1100671_0 Produces ATP from ADP in the presence of a proton gradient across the membrane. The catalytic sites are hosted primarily by the beta subunits K02112 - 3.6.3.14 3.082e-296 912.0
DYD1_k127_1100671_1 Protein of unknown function (DUF4197) - - - 0.0000000000000000000000000000000000000000000000004995 178.0
DYD1_k127_1100671_2 ATP synthase K02114 - - 0.00000000000000000000000000000000004762 138.0
DYD1_k127_1100671_3 Tetratricopeptide repeat - - - 0.00000000000000000000006452 110.0
DYD1_k127_1100671_4 TIGRFAM gliding motility associated - - - 0.0000001562 61.0
DYD1_k127_1109502_0 Excises uracil residues from the DNA which can arise as a result of misincorporation of dUMP residues by DNA polymerase or due to deamination of cytosine K03648 - 3.2.2.27 0.000000000000000000000000000000000000000000000000000000000002794 210.0
DYD1_k127_1109502_1 Histidine ammonia-lyase K01745 - 4.3.1.3 0.0000000000000000000000000000000000000000004911 162.0
DYD1_k127_1109502_2 Aromatic amino acid lyase K01745 - 4.3.1.3 0.0000000000000000001044 89.0
DYD1_k127_112826_0 signal transduction histidine kinase K07675 - 2.7.13.3 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005343 354.0
DYD1_k127_112826_1 Could be involved in insertion of integral membrane proteins into the membrane K08998 - - 0.00000000000000000000000000000000000000005348 151.0
DYD1_k127_112826_2 RNaseP catalyzes the removal of the 5'-leader sequence from pre-tRNA to produce the mature 5'-terminus. It can also cleave other RNA substrates such as 4.5S RNA. The protein component plays an auxiliary but essential role in vivo by binding to the 5'-leader sequence and broadening the substrate specificity of the ribozyme K03536 - 3.1.26.5 0.00000000000000000000000000003179 121.0
DYD1_k127_112826_3 Belongs to the bacterial ribosomal protein bL34 family K02914 - - 0.00000000000000000008944 89.0
DYD1_k127_112826_4 Type IX secretion system membrane protein PorP/SprF - - - 0.00000000000000000009274 96.0
DYD1_k127_1130184_0 Domain of unknown function (DUF4369) - - - 0.0000000000000000000000000000000000000000000000000000000000000000000001275 245.0
DYD1_k127_1130184_1 SusD family K21572 - - 0.0000000000000000000000000000000000000000000000000000000000008982 213.0
DYD1_k127_1133045_0 Proton-translocating NADH-quinone oxidoreductase, chain L K00341 - 1.6.5.3 2.18e-263 822.0
DYD1_k127_1133045_1 NADH-quinone oxidoreductase, chain M K00342 - 1.6.5.3 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007934 550.0
DYD1_k127_1135690_0 - - - - 0.000000000000000000000000000000000000002466 150.0
DYD1_k127_1137524_0 TIGRFAM nqrF NADH ubiquinone oxidoreductase, Na( )-translocating, F subunit K00351 - 1.6.5.8 1.266e-220 689.0
DYD1_k127_1137524_1 Flavin transferase that catalyzes the transfer of the FMN moiety of FAD and its covalent binding to the hydroxyl group of a threonine residue in a target flavoprotein K03734 - 2.7.1.180 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001428 320.0
DYD1_k127_1137524_2 Rnf-Nqr subunit, membrane protein K00350 - 1.6.5.8 0.0000000000007961 68.0
DYD1_k127_1147350_0 May be involved in recombinational repair of damaged DNA K03631 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001216 447.0
DYD1_k127_1147350_1 Zinc ribbon domain K07164 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005851 374.0
DYD1_k127_115775_0 Synthesizes selenophosphate from selenide and ATP K01008 - 2.7.9.3 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007303 461.0
DYD1_k127_115775_1 Amidinotransferase - - - 0.00000000000000000000000000000000000000000000000000000000000000005773 229.0
DYD1_k127_1163802_0 - - - - 0.00000000000485 68.0
DYD1_k127_117790_0 COG2204 Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains - - - 4.839e-214 670.0
DYD1_k127_117790_1 phosphohydrolase K06885 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006225 568.0
DYD1_k127_117790_2 Catalyzes the hydrolysis of UDP-3-O-myristoyl-N- acetylglucosamine to form UDP-3-O-myristoylglucosamine and acetate, the committed step in lipid A biosynthesis K16363 - 3.5.1.108,4.2.1.59 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001743 511.0
DYD1_k127_117790_3 Catalyzes the N-acylation of UDP-3-O-acylglucosamine using 3-hydroxyacyl-ACP as the acyl donor. Is involved in the biosynthesis of lipid A, a phosphorylated glycolipid that anchors the lipopolysaccharide to the outer membrane of the cell K02536 - 2.3.1.191 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001201 483.0
DYD1_k127_117790_4 Catalyzes the N-acylation of UDP-3-O-acylglucosamine using 3-hydroxyacyl-ACP as the acyl donor. Is involved in the biosynthesis of lipid A, a phosphorylated glycolipid that anchors the lipopolysaccharide to the outer membrane of the cell K02536 - 2.3.1.191 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000184 446.0
DYD1_k127_117790_5 Protein of unknown function (DUF433) - - - 0.00000000000000000000001278 101.0
DYD1_k127_117790_6 - - - - 0.0000000000000000002364 94.0
DYD1_k127_117824_0 guanyl-nucleotide exchange factor activity - - - 0.00000000000000000000000006338 122.0
DYD1_k127_1202843_0 Major facilitator Superfamily K08162,K08226,K16211 - - 0.00000000000000000000000000000000000000000000001586 179.0
DYD1_k127_1228845_0 Hydroxymethylglutaryl-CoA lyase K01640 - 4.1.3.4 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007562 391.0
DYD1_k127_1228845_1 Belongs to the class IV-like SAM-binding methyltransferase superfamily. RNA methyltransferase TrmH family K03218,K03437 - 2.1.1.185 0.0000000000000000000000000000000000000000000000000000001397 196.0
DYD1_k127_1228845_2 GSCFA family - - - 0.00000000000000000000000001723 109.0
DYD1_k127_124473_0 S53, subtilisin kexin sedolisin - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000002005 289.0
DYD1_k127_124473_1 S53, subtilisin kexin sedolisin - - - 0.000000000000000000000000000000000000000000000000000000000000835 219.0
DYD1_k127_124473_2 - - - - 0.000000000000000000000000000000000000000000000000000012 198.0
DYD1_k127_1274983_0 MaoC like domain K02618 - 1.2.1.91,3.3.2.12 5.346e-258 801.0
DYD1_k127_1277832_0 fatty acid desaturase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007174 508.0
DYD1_k127_1277832_1 Belongs to the RNA methyltransferase TrmD family K00554 GO:0001510,GO:0003674,GO:0003824,GO:0006139,GO:0006396,GO:0006399,GO:0006400,GO:0006725,GO:0006807,GO:0008033,GO:0008150,GO:0008152,GO:0008168,GO:0008173,GO:0008175,GO:0008757,GO:0009019,GO:0009451,GO:0009987,GO:0010467,GO:0016070,GO:0016423,GO:0016740,GO:0016741,GO:0016772,GO:0016779,GO:0030488,GO:0032259,GO:0034470,GO:0034641,GO:0034660,GO:0043170,GO:0043412,GO:0043414,GO:0044237,GO:0044238,GO:0044260,GO:0046483,GO:0050518,GO:0070567,GO:0071704,GO:0090304,GO:0140098,GO:0140101,GO:1901360 2.1.1.228 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004281 395.0
DYD1_k127_1277832_2 Tetratricopeptide repeat - - - 0.00000000000000000000000000000000000000000000000000000000000000000001236 240.0
DYD1_k127_1277832_3 protein SCO1 SenC PrrC involved in biogenesis of respiratory and photosynthetic systems K07152 - - 0.00000000000000000000000000000000000000000000000000000000000000001791 228.0
DYD1_k127_1277832_4 Cytochrome c K02305,K07152 - - 0.0000000000000000000000000000000000000000000001019 173.0
DYD1_k127_1284569_0 Catalyzes the synthesis of GMP from XMP K01951 GO:0003674,GO:0003824,GO:0003921,GO:0003922,GO:0006139,GO:0006163,GO:0006164,GO:0006177,GO:0006725,GO:0006753,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009116,GO:0009117,GO:0009119,GO:0009123,GO:0009124,GO:0009126,GO:0009127,GO:0009150,GO:0009152,GO:0009156,GO:0009161,GO:0009163,GO:0009165,GO:0009167,GO:0009168,GO:0009259,GO:0009260,GO:0009987,GO:0016874,GO:0016879,GO:0016884,GO:0018130,GO:0019438,GO:0019637,GO:0019693,GO:0034404,GO:0034641,GO:0034654,GO:0042278,GO:0042451,GO:0042455,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0044283,GO:0046037,GO:0046128,GO:0046129,GO:0046390,GO:0046483,GO:0055086,GO:0071704,GO:0072521,GO:0072522,GO:0090407,GO:1901068,GO:1901070,GO:1901135,GO:1901137,GO:1901293,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576,GO:1901657,GO:1901659 6.3.5.2 4.757e-220 693.0
DYD1_k127_1284569_1 leucine binding - - - 0.00000000000000000000000000000000000000000000000000000000000054 220.0
DYD1_k127_128483_0 Cell wall formation. Adds enolpyruvyl to UDP-N- acetylglucosamine K00790 - 2.5.1.7 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002292 591.0
DYD1_k127_128483_1 PFAM Glycosyl transferase, group 1 - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001107 368.0
DYD1_k127_128483_2 Domain of unknown function (DUF4290) - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001039 332.0
DYD1_k127_128483_3 PFAM Yqey-like protein K09117 - - 0.000000000000000000000000000000000000000000000000000000000008941 210.0
DYD1_k127_128483_4 TIGRFAM Gliding motility-associated protein, GldC - - - 0.0000000000000000000000000000000000000002151 152.0
DYD1_k127_128483_5 Colicin V production protein K03558 - - 0.000001445 51.0
DYD1_k127_1288583_0 Bacteriocin-protection, YdeI or OmpD-Associated - - - 0.0000000000000000000000000000000000000000000000000000000000000001758 226.0
DYD1_k127_1288583_1 Activator of Hsp90 ATPase homolog 1-like protein - - - 0.0000000000000000000000000000000000000000000001439 172.0
DYD1_k127_1288583_2 peptidase M24 K01262 - 3.4.11.9 0.00000000000000000000004939 101.0
DYD1_k127_1288583_4 - - - - 0.0000272 47.0
DYD1_k127_1289373_0 Electron transfer flavoprotein K03522 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001358 456.0
DYD1_k127_1289373_1 Catalyzes the phosphorylation of the position 2 hydroxy group of 4-diphosphocytidyl-2C-methyl-D-erythritol K00919 GO:0003674,GO:0003824,GO:0006793,GO:0006796,GO:0008150,GO:0008152,GO:0009987,GO:0016301,GO:0016310,GO:0016740,GO:0016772,GO:0016773,GO:0044237,GO:0050515 2.7.1.148 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002638 339.0
DYD1_k127_1289373_2 PFAM Uncharacterised ACR, COG1259 K08999 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000474 306.0
DYD1_k127_1289373_3 PFAM Glyoxalase Bleomycin resistance protein Dioxygenase superfamily K07104 - 1.13.11.2 0.0000000000000000000000000000000000000000000000000000000000000000000000000000003489 267.0
DYD1_k127_1292101_0 Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family - - - 2.498e-293 917.0
DYD1_k127_1292101_1 S1 P1 Nuclease - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009296 439.0
DYD1_k127_1292101_2 PFAM Outer membrane efflux protein - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003399 441.0
DYD1_k127_1292101_3 Catalyzes the reversible conversion of 3- phosphohydroxypyruvate to phosphoserine and of 3-hydroxy-2-oxo-4- phosphonooxybutanoate to phosphohydroxythreonine K00831 GO:0003674,GO:0003824,GO:0004648,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006082,GO:0006520,GO:0006563,GO:0006564,GO:0006807,GO:0008150,GO:0008152,GO:0008483,GO:0008652,GO:0009058,GO:0009069,GO:0009070,GO:0009987,GO:0016053,GO:0016740,GO:0016769,GO:0019752,GO:0043436,GO:0044237,GO:0044238,GO:0044249,GO:0044281,GO:0044283,GO:0044424,GO:0044464,GO:0046394,GO:0071704,GO:1901564,GO:1901566,GO:1901576,GO:1901605,GO:1901607 2.6.1.52 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000269 423.0
DYD1_k127_1292101_4 Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002469 358.0
DYD1_k127_1292101_5 PFAM Bacterial regulatory proteins, tetR family - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000004466 273.0
DYD1_k127_1292101_6 Protein of unknown function (DUF502) - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000001236 263.0
DYD1_k127_1295372_0 Belongs to the TRAFAC class translation factor GTPase superfamily. Classic translation factor GTPase family. CysN NodQ subfamily K00955,K00956 - 2.7.1.25,2.7.7.4 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003561 511.0
DYD1_k127_1295372_1 PFAM Phosphoadenosine phosphosulfate reductase K00957 - 2.7.7.4 0.0000000000000000000000000000000000000000008215 157.0
DYD1_k127_1295372_2 Pseudouridine synthase K06179,K06180 - 5.4.99.23,5.4.99.24 0.00000002394 56.0
DYD1_k127_1295556_0 dienelactone hydrolase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000002788 268.0
DYD1_k127_1295556_1 - - - - 0.0000000000000000000000000000000000000000001298 164.0
DYD1_k127_1295556_2 Dna alkylation repair - - - 0.00000001373 58.0
DYD1_k127_129809_0 SNARE associated Golgi protein K03975 - - 0.00000000000000000000000000000000000002582 147.0
DYD1_k127_1299157_0 COGs COG3653 N-acyl-D-aspartate D-glutamate deacylase K06015 - 3.5.1.81 1.783e-272 848.0
DYD1_k127_1299157_1 Beta-lactamase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008219 534.0
DYD1_k127_1299157_2 Cys/Met metabolism PLP-dependent enzyme K01761 - 4.4.1.11 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001524 524.0
DYD1_k127_1299157_3 malonyl CoA-acyl carrier protein transacylase K00645 - 2.3.1.39 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001839 466.0
DYD1_k127_1299157_4 Belongs to the ompA family K03286 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008005 396.0
DYD1_k127_1299157_5 GTP cyclohydrolase K01495 GO:0000166,GO:0001882,GO:0001883,GO:0003674,GO:0003824,GO:0003933,GO:0003934,GO:0005488,GO:0005525,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006066,GO:0006725,GO:0006729,GO:0006732,GO:0006807,GO:0008150,GO:0008152,GO:0008270,GO:0009058,GO:0009108,GO:0009987,GO:0016787,GO:0016810,GO:0016814,GO:0017076,GO:0017144,GO:0018130,GO:0019001,GO:0019238,GO:0019438,GO:0019751,GO:0032549,GO:0032550,GO:0032553,GO:0032555,GO:0032561,GO:0034311,GO:0034312,GO:0034641,GO:0035639,GO:0036094,GO:0042558,GO:0042559,GO:0043167,GO:0043168,GO:0043169,GO:0044237,GO:0044249,GO:0044271,GO:0044281,GO:0044283,GO:0044424,GO:0044464,GO:0046146,GO:0046165,GO:0046173,GO:0046483,GO:0046872,GO:0046914,GO:0051186,GO:0051188,GO:0071704,GO:0097159,GO:0097367,GO:1901265,GO:1901360,GO:1901362,GO:1901363,GO:1901564,GO:1901566,GO:1901576,GO:1901615,GO:1901617 3.5.4.16 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004743 334.0
DYD1_k127_1299157_6 Pregnancy-associated plasma protein-A - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000549 309.0
DYD1_k127_1299157_7 Gnat family - - - 0.00000000000000000000000000000000000000000000000000000000000000000000004312 243.0
DYD1_k127_1299157_8 Pfam 6-pyruvoyl tetrahydropterin synthase K01737 - 4.1.2.50,4.2.3.12 0.00000000000000000000000000000000000000000000000000000000000000001781 226.0
DYD1_k127_1299157_9 Pfam DinB family - - - 0.00000000000000000000000000000000000000000000000000005653 192.0
DYD1_k127_1312393_0 Glucose / Sorbosone dehydrogenase K21430 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000002996 325.0
DYD1_k127_1312393_1 Belongs to the PdxA family K00097 - 1.1.1.262 0.0000000000000000000000000000000000000000000000000008936 185.0
DYD1_k127_1312393_2 SPTR Peptidase S8 and S53 subtilisin kexin sedolisin - - - 0.000000000000000000000000000001419 141.0
DYD1_k127_1312393_3 peptidase activity, acting on L-amino acid peptides - - - 0.0000000000000000000001329 115.0
DYD1_k127_1312393_4 C-terminal domain of CHU protein family - - - 0.0000000000000000000002309 114.0
DYD1_k127_1312393_5 peptidase activity, acting on L-amino acid peptides - - - 0.00000000000000000008667 106.0
DYD1_k127_1314755_0 PFAM Glycosyl transferase family 2 - - - 0.000000000000000000000000000000000000000000000000000000001925 206.0
DYD1_k127_1314755_1 PFAM Glycosyl transferase family 4 - - - 0.00000000000000000000000000000000001254 143.0
DYD1_k127_1317608_0 cAMP biosynthetic process - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000004403 301.0
DYD1_k127_1317608_1 Tetratricopeptide repeat - - - 0.0000000000000000000000000000000000000000000000000000000000000001899 230.0
DYD1_k127_1318158_0 Catalyzes the attachment of alanine to tRNA(Ala) in a two-step reaction alanine is first activated by ATP to form Ala- AMP and then transferred to the acceptor end of tRNA(Ala). Also edits incorrectly charged Ser-tRNA(Ala) and Gly-tRNA(Ala) via its editing domain K01872 GO:0003674,GO:0003824,GO:0004812,GO:0004813,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006082,GO:0006139,GO:0006396,GO:0006399,GO:0006400,GO:0006412,GO:0006418,GO:0006419,GO:0006518,GO:0006520,GO:0006725,GO:0006807,GO:0008033,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009451,GO:0009987,GO:0010467,GO:0016070,GO:0016597,GO:0016874,GO:0016875,GO:0019538,GO:0019752,GO:0031406,GO:0034470,GO:0034641,GO:0034645,GO:0034660,GO:0036094,GO:0043038,GO:0043039,GO:0043043,GO:0043167,GO:0043168,GO:0043170,GO:0043177,GO:0043412,GO:0043436,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044281,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0071704,GO:0090304,GO:0140098,GO:0140101,GO:1901360,GO:1901564,GO:1901566,GO:1901576 6.1.1.7 3.462e-208 660.0
DYD1_k127_1318158_1 Allows the formation of correctly charged Asn-tRNA(Asn) or Gln-tRNA(Gln) through the transamidation of misacylated Asp- tRNA(Asn) or Glu-tRNA(Gln) in organisms which lack either or both of asparaginyl-tRNA or glutaminyl-tRNA synthetases. The reaction takes place in the presence of glutamine and ATP through an activated phospho-Asp-tRNA(Asn) or phospho-Glu-tRNA(Gln) K02434 - 6.3.5.6,6.3.5.7 1.246e-200 636.0
DYD1_k127_1318158_2 serine-type endopeptidase activity K04771 - 3.4.21.107 0.000000000000000000000000000000000000000000000000000000000000002955 229.0
DYD1_k127_1318158_3 Catalyzes the attachment of alanine to tRNA(Ala) in a two-step reaction alanine is first activated by ATP to form Ala- AMP and then transferred to the acceptor end of tRNA(Ala). Also edits incorrectly charged Ser-tRNA(Ala) and Gly-tRNA(Ala) via its editing domain K01872 GO:0003674,GO:0003824,GO:0004812,GO:0004813,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006082,GO:0006139,GO:0006396,GO:0006399,GO:0006400,GO:0006412,GO:0006418,GO:0006419,GO:0006518,GO:0006520,GO:0006725,GO:0006807,GO:0008033,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009451,GO:0009987,GO:0010467,GO:0016070,GO:0016597,GO:0016874,GO:0016875,GO:0019538,GO:0019752,GO:0031406,GO:0034470,GO:0034641,GO:0034645,GO:0034660,GO:0036094,GO:0043038,GO:0043039,GO:0043043,GO:0043167,GO:0043168,GO:0043170,GO:0043177,GO:0043412,GO:0043436,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044281,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0071704,GO:0090304,GO:0140098,GO:0140101,GO:1901360,GO:1901564,GO:1901566,GO:1901576 6.1.1.7 0.0000000000000000000000000000000002241 134.0
DYD1_k127_1318158_4 oxidoreductase activity, acting on CH-OH group of donors K00059 - 1.1.1.100 0.0000000000000000000000000002461 117.0
DYD1_k127_1318158_5 Domain of unknown function (DUF4369) - - - 0.0000000000000000000000003129 113.0
DYD1_k127_1319814_0 Has lipid A 3-O-deacylase activity. Hydrolyzes the ester bond at the 3 position of lipid A, a bioactive component of lipopolysaccharide (LPS), thereby releasing the primary fatty acyl moiety - - - 0.0000000000000000000000000000000000000000000000000000000000000005438 226.0
DYD1_k127_1319814_1 Belongs to the UPF0312 family - - - 0.000000000000000000000000000000000000000000000000000004824 192.0
DYD1_k127_1333014_0 serine-type exopeptidase activity K01322 GO:0005575,GO:0005623,GO:0042597,GO:0044464 3.4.21.26 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007326 445.0
DYD1_k127_1333014_1 dTDP-4-dehydrorhamnose reductase K00067 - 1.1.1.133 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005828 342.0
DYD1_k127_1333014_2 Belongs to the arginase family K01476,K01480 - 3.5.3.1,3.5.3.11 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002069 332.0
DYD1_k127_1333014_3 Protein of unknown function (DUF1684) K09164 - - 0.00000000000000000000000000000000000000000000000000000001348 204.0
DYD1_k127_1335487_0 Catalyzes the two-step NADP-dependent conversion of GDP- 4-dehydro-6-deoxy-D-mannose to GDP-fucose, involving an epimerase and a reductase reaction K02377 - 1.1.1.271 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004233 475.0
DYD1_k127_1335487_1 Transposase - - - 0.00000000000000000000000000000000000000000000000000000001798 201.0
DYD1_k127_1335487_2 transferase activity, transferring glycosyl groups - - - 0.0000000000000000000000000000000000000000000000000002338 200.0
DYD1_k127_1335487_3 Glycosyl transferase family 2 K07011 - - 0.000000000000000000201 99.0
DYD1_k127_1336350_0 FG-GAP repeat - - - 0.0000000000000000000000000005924 119.0
DYD1_k127_1336350_1 Tetratricopeptide repeat - - - 0.0000000002589 72.0
DYD1_k127_133752_0 The UvrABC repair system catalyzes the recognition and processing of DNA lesions. UvrC both incises the 5' and 3' sides of the lesion. The N-terminal half is responsible for the 3' incision and the C-terminal half is responsible for the 5' incision K03703 GO:0005575,GO:0005622,GO:0005623,GO:0006950,GO:0006974,GO:0008150,GO:0009380,GO:0009987,GO:0032991,GO:0033554,GO:0044424,GO:0044464,GO:0050896,GO:0051716,GO:1902494,GO:1905347,GO:1905348,GO:1990391 - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004172 501.0
DYD1_k127_1350662_0 Cell division protein that is involved in the assembly of the Z ring. May serve as a membrane anchor for the Z ring K03590 - - 3.638e-246 766.0
DYD1_k127_1350662_1 Essential cell division protein that forms a contractile ring structure (Z ring) at the future cell division site. The regulation of the ring assembly controls the timing and the location of cell division. One of the functions of the FtsZ ring is to recruit other cell division proteins to the septum to produce a new cell wall between the dividing cells. Binds GTP and shows GTPase activity K03531 - - 2.249e-237 750.0
DYD1_k127_1350662_2 Belongs to the MurCDEF family K01924 - 6.3.2.8 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001452 544.0
DYD1_k127_1350662_3 Cell division protein K03589 - - 0.0000000000000000000000000000000000000000000000000000000000000000001659 241.0
DYD1_k127_1350662_4 Plasmid maintenance system killer protein K07334 - - 0.00000002256 58.0
DYD1_k127_1372022_0 Belongs to the UPF0176 family K07146 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003597 542.0
DYD1_k127_1372022_1 Pyridoxal-phosphate dependent enzyme K01754 - 4.3.1.19 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004587 442.0
DYD1_k127_1372022_2 Cupin superfamily (DUF985) K09705 - - 0.000000000000000000000000000000000000000000000000000000000000000224 223.0
DYD1_k127_1372022_3 endoribonuclease L-PSP - - - 0.000000000001108 69.0
DYD1_k127_1374541_0 Esterase of the alpha-beta hydrolase superfamily - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000496 430.0
DYD1_k127_1374541_1 protein required for cytochrome oxidase assembly K02259 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001059 401.0
DYD1_k127_1374541_2 Cytochrome C oxidase, cbb3-type, subunit III K19713 - 1.8.2.2 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003367 380.0
DYD1_k127_1374541_3 - - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001149 304.0
DYD1_k127_1374541_4 Endonuclease that specifically degrades the RNA of RNA- DNA hybrids K03470 - 3.1.26.4 0.00000000000000000000000000000000000000000000000000000000000000000000000000000007831 271.0
DYD1_k127_1380646_0 Protein of unknown function (Porph_ging) - - - 0.00000000000000000000000000000000000000000000000000000000000001047 222.0
DYD1_k127_1380646_1 Outer membrane protein beta-barrel family - - - 0.0000000000000000000000000000000000002401 145.0
DYD1_k127_1388975_0 Involved in transcription antitermination. Required for transcription of ribosomal RNA (rRNA) genes. Binds specifically to the boxA antiterminator sequence of the ribosomal RNA (rrn) operons K03625 - - 0.00000000000000000000000000000000000000000000000000000000002073 212.0
DYD1_k127_1388975_1 Prevents misfolding and promotes the refolding and proper assembly of unfolded polypeptides generated under stress conditions K04077 GO:0003674,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006457,GO:0006458,GO:0008150,GO:0009987,GO:0016465,GO:0032991,GO:0044183,GO:0044424,GO:0044444,GO:0044445,GO:0044464,GO:0051082,GO:0061077,GO:0101031,GO:1990220 - 0.00000000000000000000000000000000000000000000000631 172.0
DYD1_k127_1388975_2 Binds to Cpn60 in the presence of Mg-ATP and suppresses the ATPase activity of the latter K04078 GO:0003674,GO:0005488,GO:0005515,GO:0006457,GO:0006458,GO:0006950,GO:0006986,GO:0008150,GO:0009987,GO:0010033,GO:0035966,GO:0042221,GO:0043167,GO:0043169,GO:0046872,GO:0050896,GO:0051082,GO:0051084,GO:0051085,GO:0051087,GO:0061077 - 0.0000000000000000000000000000000000000000000009475 166.0
DYD1_k127_1392728_0 RNA polymerase, sigma-54 factor K03092 - - 3.192e-234 733.0
DYD1_k127_1392728_1 PFAM Uncharacterised BCR, COG1649 - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003429 587.0
DYD1_k127_1392728_2 phosphoesterase, PA-phosphatase related - - - 0.0000000000000000000000000000000000000000000000000000001711 203.0
DYD1_k127_1392728_3 DinB family - - - 0.0000000000000000000002097 102.0
DYD1_k127_1396658_0 Catalyzes the radical-mediated insertion of two sulfur atoms into the C-6 and C-8 positions of the octanoyl moiety bound to the lipoyl domains of lipoate-dependent enzymes, thereby converting the octanoylated domains into lipoylated derivatives K03644 - 2.8.1.8 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001166 333.0
DYD1_k127_1396658_1 COGs COG4632 Exopolysaccharide biosynthesis protein related to N-acetylglucosamine-1-phosphodiester alpha-N-acetylglucosaminidase - - - 0.0000000000000000000000000000000000000000000000000000000000001063 220.0
DYD1_k127_1405588_0 PFAM Prolyl oligopeptidase, N-terminal beta-propeller domain K01322 GO:0005575,GO:0005623,GO:0042597,GO:0044464 3.4.21.26 3.507e-279 869.0
DYD1_k127_1405588_1 Catalyzes the phosphorylation of D-fructose 6-phosphate to fructose 1,6-bisphosphate by ATP, the first committing step of glycolysis K00850 - 2.7.1.11 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002978 539.0
DYD1_k127_1405588_2 Belongs to the dicarboxylate amino acid cation symporter (DAACS) (TC 2.A.23) family K11102,K11103 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002317 445.0
DYD1_k127_1405588_3 Belongs to the pyruvate kinase family K00873 - 2.7.1.40 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009077 422.0
DYD1_k127_1415583_0 DNA polymerase K02347 - - 2.795e-217 687.0
DYD1_k127_1415583_1 Belongs to the ComB family - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000004393 285.0
DYD1_k127_1415583_2 membrane - - - 0.00000000000000000000000000000000000000000000000000000000005184 208.0
DYD1_k127_1420214_0 PFAM Aminotransferase class I and II K00812 - 2.6.1.1 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000997 407.0
DYD1_k127_1420214_1 Putative cyclase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001163 362.0
DYD1_k127_1420773_0 His Kinase A (phosphoacceptor) domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004667 365.0
DYD1_k127_1420773_1 Histidine kinase - - - 0.000000000000000000000001197 103.0
DYD1_k127_1423153_0 Belongs to the PdxA family K00097 - 1.1.1.262 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002412 363.0
DYD1_k127_1423153_1 - - - - 0.00000000000000000000000000000000000000000000000000000000000000000001958 239.0
DYD1_k127_1423153_2 ABC-2 family transporter protein K01992 - - 0.00000000000000000000000000000000000000000001055 168.0
DYD1_k127_143125_0 Peptidase family M1 domain K01256 - 3.4.11.2 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004014 373.0
DYD1_k127_1432474_0 PFAM Glyoxalase bleomycin resistance protein dioxygenase - - - 0.00000000000000000000000000000000000000000000000000000000001798 211.0
DYD1_k127_1432474_1 Transcriptional regulator - - - 0.0000000000000000000000000000000000000000000000000001355 188.0
DYD1_k127_1437267_0 PFAM peptidase T2 asparaginase 2 K01444,K13051 GO:0005575,GO:0005623,GO:0042597,GO:0044464 3.4.19.5,3.5.1.26 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000296 471.0
DYD1_k127_1437267_1 Xylose isomerase-like TIM barrel - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000116 347.0
DYD1_k127_1437267_2 Participates in the control of copper homeostasis K06201 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000648 302.0
DYD1_k127_1437267_3 Activator of Hsp90 ATPase homolog 1-like protein - - - 0.000000000000000000000000000000000000000000000000000000000005202 211.0
DYD1_k127_1437267_4 (twin-arginine translocation) pathway signal - - - 0.000000000000000000002944 94.0
DYD1_k127_1437721_0 Pyruvate 2-oxoglutarate dehydrogenase complex, dehydrogenase (E1) component, eukaryotic type K00615 - 2.2.1.1 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002346 568.0
DYD1_k127_1447064_0 Peptidase family C25 - - - 1.341e-255 807.0
DYD1_k127_1447064_1 gliding motility-associated lipoprotein GldJ - - - 0.000000000000000000000000000000000000000000000001663 180.0
DYD1_k127_1453116_0 Participates in chromosomal partition during cell division. May act via the formation of a condensin-like complex containing Smc and ScpB that pull DNA away from mid-cell into both cell halves K05896 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001699 349.0
DYD1_k127_1453116_1 TIGRFAM Peroxiredoxin, osmotically inducible protein C, subgroup K04063 - - 0.0000000000000000000000000000000000000000009821 162.0
DYD1_k127_1453116_2 Cellulase (glycosyl hydrolase family 5) K01179,K01183 - 3.2.1.14,3.2.1.4 0.0000000000000004855 89.0
DYD1_k127_1460690_0 Glycosyltransferase family 9 (heptosyltransferase) K02843 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009927 448.0
DYD1_k127_1460690_1 tRNA nucleotidyltransferase K00970,K00974 - 2.7.7.19,2.7.7.72 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001296 385.0
DYD1_k127_1460690_2 Belongs to the transferase hexapeptide repeat family K00674 - 2.3.1.117 0.000000000000000000000000000000000609 133.0
DYD1_k127_1462253_0 RNA polymerase that catalyzes the synthesis of short RNA molecules used as primers for DNA polymerase during DNA replication K02316 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001109 519.0
DYD1_k127_1462253_1 Regulator K19641 - - 0.00000001568 56.0
DYD1_k127_1470819_0 Involved in the regulation of the intracellular balance of NAD and NADP, and is a key enzyme in the biosynthesis of NADP. Catalyzes specifically the phosphorylation on 2'-hydroxyl of the adenosine moiety of NAD to yield NADP K00858 - 2.7.1.23 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007363 428.0
DYD1_k127_1470819_1 Has lipid A 3-O-deacylase activity. Hydrolyzes the ester bond at the 3 position of lipid A, a bioactive component of lipopolysaccharide (LPS), thereby releasing the primary fatty acyl moiety - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000115 396.0
DYD1_k127_1470819_2 CBS domain - - - 0.00000000000000000000000000000000000000000000000000000000000006096 220.0
DYD1_k127_1474731_0 DNA-dependent ATPase involved in processing of recombination intermediates, plays a role in repairing DNA breaks. Stimulates the branch migration of RecA-mediated strand transfer reactions, allowing the 3' invading strand to extend heteroduplex DNA faster. Binds ssDNA in the presence of ADP but not other nucleotides, has ATPase activity that is stimulated by ssDNA and various branched DNA structures, but inhibited by SSB. Does not have RecA's homology-searching function K04485 - - 2.971e-239 745.0
DYD1_k127_1474731_1 - - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003665 566.0
DYD1_k127_1474731_2 PFAM Phosphoribosyl transferase domain K00764 - 2.4.2.14 0.000000000000000000000000000000000000000000000000000000000000000000000000001405 259.0
DYD1_k127_1474731_3 Belongs to the glutathione peroxidase family K00432 - 1.11.1.9 0.0000000000000000000000000000000000000000000000000000000000000000000735 235.0
DYD1_k127_1474731_4 PFAM Peptidase, membrane zinc metallopeptidase K06973 - - 0.000000000000000000000000000002403 121.0
DYD1_k127_148191_0 Belongs to the citrate synthase family K01647 - 2.3.3.1 1.606e-250 778.0
DYD1_k127_148191_1 Catalyzes the base-exchange of a guanine (G) residue with the queuine precursor 7-aminomethyl-7-deazaguanine (PreQ1) at position 34 (anticodon wobble position) in tRNAs with GU(N) anticodons (tRNA-Asp, -Asn, -His and -Tyr). Catalysis occurs through a double-displacement mechanism. The nucleophile active site attacks the C1' of nucleotide 34 to detach the guanine base from the RNA, forming a covalent enzyme-RNA intermediate. The proton acceptor active site deprotonates the incoming PreQ1, allowing a nucleophilic attack on the C1' of the ribose to form the product. After dissociation, two additional enzymatic reactions on the tRNA convert PreQ1 to queuine (Q), resulting in the hypermodified nucleoside queuosine (7-(((4,5-cis-dihydroxy-2- cyclopenten-1-yl)amino)methyl)-7-deazaguanosine) K00773 - 2.4.2.29 3.43e-201 632.0
DYD1_k127_148191_2 Permease, YjgP YjgQ family K11720 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001175 403.0
DYD1_k127_148191_3 Condensation of UDP-2,3-diacylglucosamine and 2,3- diacylglucosamine-1-phosphate to form lipid A disaccharide, a precursor of lipid A, a phosphorylated glycolipid that anchors the lipopolysaccharide to the outer membrane of the cell K00748 - 2.4.1.182 0.00000000000000000000000000000000000000000000000004247 185.0
DYD1_k127_148191_5 resolvase domain protein - - - 0.0000114 47.0
DYD1_k127_148746_0 TonB-dependent Receptor Plug K21573 - - 0.0 1044.0
DYD1_k127_148746_1 RagB SusD domain protein K21572 - - 4.077e-205 650.0
DYD1_k127_148746_2 Nudix hydrolase K03574 - 3.6.1.55 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001335 327.0
DYD1_k127_148746_3 Belongs to the glycosyl hydrolase 13 family - - - 0.0000000000000000000000000000002785 129.0
DYD1_k127_1493207_0 Domain of unknown function (DUF5118) - - - 2.535e-266 834.0
DYD1_k127_1493207_1 Binds directly to 23S ribosomal RNA and is necessary for the in vitro assembly process of the 50S ribosomal subunit. It is not involved in the protein synthesizing functions of that subunit K02887 GO:0000027,GO:0003674,GO:0003735,GO:0005198,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0006996,GO:0008150,GO:0009987,GO:0015934,GO:0016043,GO:0022607,GO:0022613,GO:0022618,GO:0022625,GO:0022626,GO:0032991,GO:0034622,GO:0042254,GO:0042255,GO:0042273,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043933,GO:0044085,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:0065003,GO:0070925,GO:0071826,GO:0071840,GO:1990904 - 0.0000000000000000000000000000000007204 130.0
DYD1_k127_1493207_2 Belongs to the bacterial ribosomal protein bL35 family K02916 GO:0003674,GO:0003735,GO:0005198,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0015934,GO:0022625,GO:0022626,GO:0032991,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:1990904 - 0.00000000000000000000000000157 112.0
DYD1_k127_149480_0 Catalyzes the dehydration of chorismate into 3- (1- carboxyvinyl)oxy benzoate, a step in the biosynthesis of menaquinone (MK, vitamin K2) K11782 - 4.2.1.151 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006029 308.0
DYD1_k127_149480_1 Belongs to the lyase 1 family. Adenylosuccinate lyase subfamily K01756 - 4.3.2.2 0.000000000000000000000000000000000002463 141.0
DYD1_k127_1498819_0 Participates in initiation and elongation during chromosome replication K02314 - 3.6.4.12 3.829e-270 838.0
DYD1_k127_1498819_1 - - - - 0.0002146 48.0
DYD1_k127_1502581_0 Domain of Unknown Function with PDB structure (DUF3857) - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002494 609.0
DYD1_k127_1502581_1 Domain of Unknown Function with PDB structure (DUF3857) - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002298 547.0
DYD1_k127_1503978_0 von Willebrand factor, type A - - - 3.053e-215 671.0
DYD1_k127_1506042_0 Glycosyl transferases group 1 - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001318 572.0
DYD1_k127_1506042_1 COGs COG2152 glycosylase K20885 - 2.4.1.339,2.4.1.340 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003246 554.0
DYD1_k127_1506042_2 PAS fold - - - 0.0000000000000000000000000000000000000000000000001689 184.0
DYD1_k127_1506042_3 Low affinity iron permease - - - 0.00000000000000000000000000000000000000004003 156.0
DYD1_k127_1509312_0 Catalyzes the conversion of cyclic dehypoxanthine futalosine (cyclic DHFL) into 1,4-dihydroxy-6-naphthoate, a step in the biosynthesis of menaquinone (MK, vitamin K2) K11785 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006915 339.0
DYD1_k127_1509312_1 Catalyzes the hydrolysis of futalosine (FL) to dehypoxanthine futalosine (DHFL) and hypoxanthine, a step in the biosynthesis of menaquinone (MK, vitamin K2) K11783 - 3.2.2.26 0.00000000000000000000000000000000000000000001914 168.0
DYD1_k127_1531006_0 Protein of unknown function (DUF4197) - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000002862 273.0
DYD1_k127_1531006_1 flavin reductase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000001751 241.0
DYD1_k127_1531006_2 - - - - 0.000000000000000000000000000000000000000000002027 174.0
DYD1_k127_1531006_3 chlorophyll binding - - - 0.000000000000000000000000005096 121.0
DYD1_k127_1536845_0 - - - - 0.0000000000000000000000004471 119.0
DYD1_k127_1536845_1 DsrE/DsrF-like family - - - 0.0000001105 55.0
DYD1_k127_1550540_0 glucose-1-phosphate adenylyltransferase K00975 - 2.7.7.27 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009394 516.0
DYD1_k127_1550540_1 Synthesizes alpha-1,4-glucan chains using ADP-glucose K00703 - 2.4.1.21 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000001785 295.0
DYD1_k127_1551745_0 PFAM PspC domain K03973 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001325 370.0
DYD1_k127_1551745_1 Methyltransferase domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000003559 269.0
DYD1_k127_1551745_2 The glycine cleavage system catalyzes the degradation of glycine K00605 - 2.1.2.10 0.0000000000000000000000000000000000000000000000000000000000000876 213.0
DYD1_k127_1554784_0 PFAM Peptidase C14, caspase catalytic - - - 0.0000000107 62.0
DYD1_k127_1554784_1 Tetratricopeptide repeat - - - 0.0009476 50.0
DYD1_k127_1557793_0 Has an important function as a repair enzyme for proteins that have been inactivated by oxidation. Catalyzes the reversible oxidation-reduction of methionine sulfoxide in proteins to methionine K07304 - 1.8.4.11 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004032 302.0
DYD1_k127_1557793_1 Belongs to the glycosyl hydrolase 3 family K05349 - 3.2.1.21 0.00000000000000000000000000000000000000000000000000000000006046 211.0
DYD1_k127_1562008_0 PFAM sulfatase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000456 525.0
DYD1_k127_1562008_1 Protein of unknown function DUF72 - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002838 459.0
DYD1_k127_1562008_2 N-acetylmuramoyl-L-alanine amidase K01447,K11066 - 3.5.1.28 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002106 343.0
DYD1_k127_1562008_3 Intracellular protease, PfpI family K05520 - 3.5.1.124 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000002235 292.0
DYD1_k127_1562008_4 COGs COG0389 Nucleotidyltransferase DNA polymerase involved in DNA repair K03502 - - 0.000000000000000000000000000000000000000000000000000000000000000000000003839 246.0
DYD1_k127_1562008_5 pfam nudix - - - 0.000000000000000000000000000000000000000000000000000000001994 203.0
DYD1_k127_1562883_0 Catalyzes the oxidation of L-aspartate to iminoaspartate K00278 - 1.4.3.16 2.094e-282 874.0
DYD1_k127_1562883_1 Converts 2C-methyl-D-erythritol 2,4-cyclodiphosphate (ME-2,4cPP) into 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate K03526 GO:0003674,GO:0003824,GO:0006081,GO:0006082,GO:0006090,GO:0006629,GO:0006644,GO:0006720,GO:0006793,GO:0006796,GO:0008150,GO:0008152,GO:0008299,GO:0008610,GO:0008654,GO:0009058,GO:0009240,GO:0009987,GO:0016491,GO:0016725,GO:0019288,GO:0019637,GO:0019682,GO:0019752,GO:0032787,GO:0043436,GO:0044237,GO:0044238,GO:0044249,GO:0044255,GO:0044281,GO:0046429,GO:0046490,GO:0052592,GO:0055114,GO:0071704,GO:0090407,GO:1901135,GO:1901576 1.17.7.1,1.17.7.3 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003859 406.0
DYD1_k127_1562883_2 Bacterial lipid A biosynthesis acyltransferase K02517 - 2.3.1.241 0.000000000000000000000000000000000000000000000004068 177.0
DYD1_k127_1573233_0 Catalyzes the reductive methylation of 2'-deoxyuridine- 5'-monophosphate (dUMP) to 2'-deoxythymidine-5'-monophosphate (dTMP) while utilizing 5,10-methylenetetrahydrofolate (mTHF) as the methyl donor and reductant in the reaction, yielding dihydrofolate (DHF) as a by-product. This enzymatic reaction provides an intracellular de novo source of dTMP, an essential precursor for DNA biosynthesis K00560 - 2.1.1.45 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004743 471.0
DYD1_k127_1573233_1 - - - - 0.00000000007797 67.0
DYD1_k127_1577656_0 phosphate-selective porin O and P - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000149 299.0
DYD1_k127_1577656_1 COGs COG1392 Phosphate transport regulator (distant homolog of PhoU) K07220 - - 0.000000000000000000000000000000000000000000000000000000000001025 213.0
DYD1_k127_1582820_0 Peptidase family M1 domain - - - 9.174e-196 617.0
DYD1_k127_1582820_1 COGs COG2197 Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain - - - 0.0000000000000000000000000000000000000000000000000001083 188.0
DYD1_k127_1582820_2 - - - - 0.000023 51.0
DYD1_k127_1582991_0 Organic solvent tolerance protein OstA - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001438 549.0
DYD1_k127_1585949_0 This protein is involved in the repair of mismatches in DNA. It is required for dam-dependent methyl-directed DNA mismatch repair. May act as a molecular matchmaker , a protein that promotes the formation of a stable complex between two or more DNA-binding proteins in an ATP-dependent manner without itself being part of a final effector complex K03572 GO:0003674,GO:0003676,GO:0003677,GO:0003697,GO:0003824,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0006139,GO:0006259,GO:0006281,GO:0006298,GO:0006725,GO:0006807,GO:0006950,GO:0006974,GO:0008150,GO:0008152,GO:0009987,GO:0016462,GO:0016787,GO:0016817,GO:0016818,GO:0016887,GO:0017111,GO:0032300,GO:0032991,GO:0033554,GO:0034641,GO:0043170,GO:0044237,GO:0044238,GO:0044260,GO:0044424,GO:0044464,GO:0046483,GO:0050896,GO:0051716,GO:0071704,GO:0090304,GO:0097159,GO:1901360,GO:1901363,GO:1990391 - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002399 540.0
DYD1_k127_1589183_0 Transporter associated domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009388 355.0
DYD1_k127_1589183_1 COG1680 Beta-lactamase class C and other penicillin binding - - - 0.0000000000000000000000000000000000000000000000000000000119 206.0
DYD1_k127_1602497_0 ABC transporter K15738 - - 7.632e-254 791.0
DYD1_k127_1602497_1 Dual-action HEIGH metallo-peptidase - - - 0.000000000000000000000000000000000000000000000000000000001509 205.0
DYD1_k127_1606813_0 Forms passive diffusion pores that allow small molecular weight hydrophilic materials across the outer membrane - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001202 535.0
DYD1_k127_1606813_1 PFAM TonB-dependent Receptor Plug Domain - - - 0.000000000000000000000000000000003395 128.0
DYD1_k127_1606813_2 - - - - 0.000000000000000000000000003695 119.0
DYD1_k127_1606813_3 - - - - 0.0000000000000000000000004088 115.0
DYD1_k127_1606813_4 ParE toxin of type II toxin-antitoxin system, parDE - - - 0.000000000000000000989 89.0
DYD1_k127_1616883_0 4Fe-4S dicluster domain K00184 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002361 391.0
DYD1_k127_1616883_1 Cytochrome C oxidase, cbb3-type, subunit III - - - 0.00000000000000000000000000000000000000000001911 165.0
DYD1_k127_1616883_2 Has lipid A 3-O-deacylase activity. Hydrolyzes the ester bond at the 3 position of lipid A, a bioactive component of lipopolysaccharide (LPS), thereby releasing the primary fatty acyl moiety - - - 0.00000000000000000000000000000000000006802 151.0
DYD1_k127_1629155_0 CarboxypepD_reg-like domain - - - 6.81e-304 951.0
DYD1_k127_1629848_0 AP endonuclease - - - 1.13e-201 630.0
DYD1_k127_1632577_0 TonB-dependent receptor - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003117 382.0
DYD1_k127_1632577_1 LytTr DNA-binding domain K02477 - - 0.00000000000000000000000000000000000000000000000005934 183.0
DYD1_k127_1633213_0 endoribonuclease L-PSP K09022 - 3.5.99.10 0.000000000000000000000000000000000000000000000000000000009827 199.0
DYD1_k127_1633213_1 3-hydroxyacyl-CoA dehydrogenase K00074,K17735 - 1.1.1.108,1.1.1.157 0.0000000001758 66.0
DYD1_k127_1633213_2 cellulose binding - - - 0.000000000478 66.0
DYD1_k127_1640006_0 Outer membrane protein assembly complex, YaeT protein K07277 - - 0.0 1047.0
DYD1_k127_1640006_1 Catalyzes the condensation of isopentenyl diphosphate (IPP) with allylic pyrophosphates generating different type of terpenoids K00806 GO:0002094,GO:0003674,GO:0003824,GO:0004659,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006066,GO:0006629,GO:0006720,GO:0008150,GO:0008152,GO:0008299,GO:0008610,GO:0009058,GO:0009987,GO:0016093,GO:0016094,GO:0016740,GO:0016765,GO:0044237,GO:0044238,GO:0044249,GO:0044255,GO:0044281,GO:0044283,GO:0044424,GO:0044444,GO:0044464,GO:0046165,GO:0071704,GO:1901576,GO:1901615,GO:1901617 2.5.1.31 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000204 372.0
DYD1_k127_1640006_2 Provides the (R)-glutamate required for cell wall biosynthesis K01776 - 5.1.1.3 0.00000000000000000000000000000000000000000000000000000000000000000001406 234.0
DYD1_k127_1640006_3 outer membrane chaperone Skp (OmpH) K06142 - - 0.00000000000000000000000000000000000000000000000000000000000000000005169 235.0
DYD1_k127_1640006_4 Outer membrane protein assembly complex, YaeT protein K07277 - - 0.00000000000000000000000000000000004993 133.0
DYD1_k127_1640006_5 unfolded protein binding K06142 - - 0.000000000000000000000001299 111.0
DYD1_k127_165344_0 Carbamoyl-phosphate synthase K01955 - 6.3.5.5 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001013 490.0
DYD1_k127_165344_1 Peptidase, M23 - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002801 469.0
DYD1_k127_165344_2 alkyl hydroperoxide reductase Thiol specific antioxidant Mal allergen K03564 - 1.11.1.15 0.00000000000000000000000000000000000000000000000000000000000000007572 224.0
DYD1_k127_165344_3 Has lipid A 3-O-deacylase activity. Hydrolyzes the ester bond at the 3 position of lipid A, a bioactive component of lipopolysaccharide (LPS), thereby releasing the primary fatty acyl moiety - - - 0.000000000000000000000000000000000000000000000000000000000000005907 228.0
DYD1_k127_16538_0 Electron transfer flavoprotein K03521 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007661 363.0
DYD1_k127_16538_1 Ligates lysine onto the cytidine present at position 34 of the AUA codon-specific tRNA(Ile) that contains the anticodon CAU, in an ATP-dependent manner. Cytidine is converted to lysidine, thus changing the amino acid specificity of the tRNA from methionine to isoleucine K04075 - 6.3.4.19 0.000000000000000000000000000000000000000000000000000000000000000000000000000001053 270.0
DYD1_k127_16538_2 Type IV pilus biogenesis stability protein PilW - - - 0.0000000000000000000000000000000000000000698 153.0
DYD1_k127_1654802_0 Domain of unknown function (DUF4403) - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001969 486.0
DYD1_k127_1654802_1 Arginyl-tRNA synthetase K01887 GO:0003674,GO:0003824,GO:0004812,GO:0004814,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006082,GO:0006139,GO:0006399,GO:0006412,GO:0006418,GO:0006420,GO:0006518,GO:0006520,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0016070,GO:0016874,GO:0016875,GO:0019538,GO:0019752,GO:0034641,GO:0034645,GO:0034660,GO:0043038,GO:0043039,GO:0043043,GO:0043170,GO:0043436,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044281,GO:0044424,GO:0044464,GO:0046483,GO:0071704,GO:0090304,GO:0140098,GO:0140101,GO:1901360,GO:1901564,GO:1901566,GO:1901576 6.1.1.19 0.00000000000000000000000000000000000000000000000000000005114 199.0
DYD1_k127_1654802_2 GtrA-like protein - - - 0.000000000000000000000000000000000000000000000000249 181.0
DYD1_k127_1656215_0 Serine aminopeptidase, S33 - - - 0.0000000000000000000000000000000000000000000000000000000000001732 224.0
DYD1_k127_1656215_1 Type VI secretion system effector, Hcp K11903 - - 0.00000000000000000000004579 105.0
DYD1_k127_1656215_2 Putative beta-lactamase-inhibitor-like, PepSY-like - - - 0.0006033 49.0
DYD1_k127_1657224_0 acyl-CoA dehydrogenase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006522 530.0
DYD1_k127_1657224_1 of the beta-lactamase superfamily I K06167 - 3.1.4.55 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003722 394.0
DYD1_k127_1663570_0 tetratricopeptide repeat - - - 0.000000000000000000000007832 113.0
DYD1_k127_1664996_0 protein methyltransferase activity - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001508 425.0
DYD1_k127_1664996_1 peptidase M42 - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002839 334.0
DYD1_k127_1664996_2 arylsulfatase activity - - - 0.0000000000000000000000000000000000000000009468 173.0
DYD1_k127_1665142_0 protein related to plant photosystem II stability assembly factor - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009345 394.0
DYD1_k127_1665142_1 Calcineurin-like phosphoesterase - - - 0.00000000000000000000000000000000000000001049 157.0
DYD1_k127_1676996_0 PFAM TonB-dependent Receptor Plug - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002401 480.0
DYD1_k127_1681397_0 Catalyzes the reversible transfer of the terminal phosphate group between ATP and AMP. Plays an important role in cellular energy homeostasis and in adenine nucleotide metabolism K00939 - 2.7.4.3 0.000000000000000000000000000000000000000000000000000000000000000000000000000000003875 276.0
DYD1_k127_1681397_1 methionine sulfoxide reductase K07305,K12267 - 1.8.4.11,1.8.4.12 0.000000000000000000000000000000000000000000000000000000000000000000000000001269 257.0
DYD1_k127_1681397_2 MaoC like domain K02618 - 1.2.1.91,3.3.2.12 0.000000000000000000000000000000000000000000000003328 174.0
DYD1_k127_1681397_3 copper resistance K07233,K07798,K14588 - - 0.00000000000000000000000002955 112.0
DYD1_k127_1681397_4 Belongs to the HMG-CoA reductase family K00054 - 1.1.1.88 0.00000000000000004343 87.0
DYD1_k127_1683188_0 PFAM Integral membrane protein DUF95 - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001087 332.0
DYD1_k127_1683188_1 pfam rdd - - - 0.0001024 46.0
DYD1_k127_1687710_0 PFAM UbiA prenyltransferase family K02548 - 2.5.1.74 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001008 327.0
DYD1_k127_1687710_1 PFAM chalcone and stilbene - - - 0.00000000000000000000000000000000000000000000000000000000001935 211.0
DYD1_k127_1693102_0 Sortilin, neurotensin receptor 3, - - - 0.0 1502.0
DYD1_k127_1693102_1 Domain of unknown function (DUF4331) - - - 0.000000000000000000000000000000000000001205 151.0
DYD1_k127_1693102_2 Belongs to the metallo-dependent hydrolases superfamily. Adenine deaminase family K01486 - 3.5.4.2 0.0003912 43.0
DYD1_k127_1699439_0 Belongs to the peptidase S41A family K03797 - 3.4.21.102 0.0000000000000000000000000000000000000000000000000000000001088 210.0
DYD1_k127_1699439_1 Belongs to the UPF0754 family - - - 0.000000000000000000000000000000000003242 140.0
DYD1_k127_1713321_0 SnoaL-like domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005889 502.0
DYD1_k127_1735187_0 TonB-dependent receptor plug domain - - - 7.748e-288 913.0
DYD1_k127_1735187_1 Phosphoribosylaminoimidazolesuccinocarboxamide synthase K01923 GO:0003674,GO:0003824,GO:0004639,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006139,GO:0006163,GO:0006164,GO:0006188,GO:0006189,GO:0006725,GO:0006753,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009117,GO:0009123,GO:0009124,GO:0009126,GO:0009127,GO:0009150,GO:0009152,GO:0009156,GO:0009161,GO:0009165,GO:0009167,GO:0009168,GO:0009259,GO:0009260,GO:0009987,GO:0016874,GO:0016879,GO:0016881,GO:0018130,GO:0019438,GO:0019637,GO:0019693,GO:0034641,GO:0034654,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0044424,GO:0044464,GO:0046040,GO:0046390,GO:0046483,GO:0055086,GO:0071704,GO:0072521,GO:0072522,GO:0090407,GO:1901135,GO:1901137,GO:1901293,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576 6.3.2.6 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007582 488.0
DYD1_k127_1735187_2 Toxin-antitoxin system, toxin component, Txe YoeB family K19158 - - 0.000000000000000000000000000000000000001672 147.0
DYD1_k127_1735187_4 Transposase - - - 0.000001183 52.0
DYD1_k127_1752628_0 Catalyzes the first step in hexosamine metabolism, converting fructose-6P into glucosamine-6P using glutamine as a nitrogen source K00820 GO:0003674,GO:0003824,GO:0004360,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006002,GO:0006040,GO:0006047,GO:0006139,GO:0006464,GO:0006486,GO:0006487,GO:0006725,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0008483,GO:0009058,GO:0009059,GO:0009100,GO:0009101,GO:0009225,GO:0009987,GO:0016740,GO:0016769,GO:0019538,GO:0019637,GO:0034641,GO:0034645,GO:0036211,GO:0043170,GO:0043412,GO:0043413,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044281,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0055086,GO:0070085,GO:0070548,GO:0071704,GO:1901135,GO:1901137,GO:1901360,GO:1901564,GO:1901566,GO:1901576 2.6.1.16 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007753 578.0
DYD1_k127_1761211_0 PKD domain containing protein - - - 3.448e-277 874.0
DYD1_k127_1761211_1 Belongs to the short-chain dehydrogenases reductases (SDR) family - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004035 355.0
DYD1_k127_1768856_0 Amidohydrolase family - - - 2.308e-244 764.0
DYD1_k127_1768856_1 COGs COG0659 Sulfate permease and related transporter (MFS superfamily) K03321 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001829 407.0
DYD1_k127_1768856_2 Amidase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000001649 247.0
DYD1_k127_1768856_3 GMP synthase-glutamine amidotransferase - - - 0.00000000001548 65.0
DYD1_k127_1781955_0 membrane - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005424 394.0
DYD1_k127_1781955_1 Peptidase S16 lon domain protein K01338,K07157 - 3.4.21.53 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001511 319.0
DYD1_k127_1781955_2 Catalyzes the phosphorylation of pantothenate (Pan), the first step in CoA biosynthesis K03525 - 2.7.1.33 0.000000000000000000000000000000000000000000000005694 173.0
DYD1_k127_1781955_3 Catalyzes the phosphorylation of pantothenate (Pan), the first step in CoA biosynthesis K03525 - 2.7.1.33 0.00000000000000000000000000000000000000000000008151 171.0
DYD1_k127_1781955_4 O-Antigen ligase K02847 - - 0.00000000003503 70.0
DYD1_k127_1781955_5 Lipopolysaccharide-assembly, LptC-related - - - 0.00000000106 62.0
DYD1_k127_1794940_0 Metal dependent phosphohydrolases with conserved 'HD' motif. - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009298 351.0
DYD1_k127_1794940_1 This protein is one of the early assembly proteins of the 50S ribosomal subunit, although it is not seen to bind rRNA by itself. It is important during the early stages of 50S assembly K02871 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000008151 267.0
DYD1_k127_1794940_2 Belongs to the universal ribosomal protein uS9 family K02996 GO:0000462,GO:0003674,GO:0003676,GO:0003723,GO:0003735,GO:0005198,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0006139,GO:0006364,GO:0006396,GO:0006412,GO:0006518,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0015935,GO:0016070,GO:0016072,GO:0019538,GO:0022613,GO:0022626,GO:0022627,GO:0030490,GO:0032991,GO:0034470,GO:0034641,GO:0034645,GO:0034660,GO:0042254,GO:0042274,GO:0043043,GO:0043170,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043603,GO:0043604,GO:0044085,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:0046483,GO:0071704,GO:0071840,GO:0090304,GO:0097159,GO:1901360,GO:1901363,GO:1901564,GO:1901566,GO:1901576,GO:1990904 - 0.00000000000000000000000000000000000000000000000000000000000003519 215.0
DYD1_k127_1794940_3 Belongs to the universal ribosomal protein uS2 family K02967 GO:0003674,GO:0003735,GO:0005198,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0006412,GO:0006518,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0015935,GO:0019538,GO:0022626,GO:0022627,GO:0032991,GO:0034641,GO:0034645,GO:0043043,GO:0043170,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:0071704,GO:1901564,GO:1901566,GO:1901576,GO:1990904 - 0.00000000000000000000000000000000007847 133.0
DYD1_k127_1794940_4 HigB_toxin, RelE-like toxic component of a toxin-antitoxin system K19166 - - 0.00000000000000000001288 94.0
DYD1_k127_1794940_5 regulator K18831 - - 0.0000000000001701 75.0
DYD1_k127_1807017_0 PFAM Glycosyl transferase family 2 - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002097 497.0
DYD1_k127_1807017_1 Inositol monophosphatase K01092 - 3.1.3.25 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002323 402.0
DYD1_k127_1812964_0 The glycine cleavage system catalyzes the degradation of glycine. The P protein binds the alpha-amino group of glycine through its pyridoxal phosphate cofactor K00281,K00283 - 1.4.4.2 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001433 537.0
DYD1_k127_1812964_1 Putative zinc- or iron-chelating domain K06940 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000002011 262.0
DYD1_k127_1812964_2 Protein of unknown function (DUF2384) - - - 0.0000000000000000000000000000000000003384 147.0
DYD1_k127_1812964_3 RES - - - 0.0000000000000000000000000000009292 126.0
DYD1_k127_1812964_4 Domain of unknown function (DUF4919) - - - 0.00009039 52.0
DYD1_k127_1825656_0 alpha-2-macroglobulin domain protein K06894 - - 9.52e-233 730.0
DYD1_k127_1840735_0 Oxidoreductase required for the transfer of electrons from pyruvate to flavodoxin K03737 - 1.2.7.1 0.0 1035.0
DYD1_k127_1840735_1 Domain of Unknown Function (DUF1080) - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001338 309.0
DYD1_k127_1840735_2 START domain - - - 0.000000000000000000000000000000000000004168 153.0
DYD1_k127_1840735_3 Catalyzes the attachment of glycine to tRNA(Gly) K01880 - 6.1.1.14 0.000000000000000000000000007291 110.0
DYD1_k127_1840736_0 Belongs to the thiolase family K00626,K07823 - 2.3.1.174,2.3.1.9 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004315 580.0
DYD1_k127_1840736_1 Specifically methylates position 2 of adenine 2503 in 23S rRNA and position 2 of adenine 37 in tRNAs K06941 GO:0000154,GO:0001510,GO:0003674,GO:0003824,GO:0006139,GO:0006364,GO:0006396,GO:0006399,GO:0006400,GO:0006725,GO:0006807,GO:0008033,GO:0008150,GO:0008152,GO:0008168,GO:0008173,GO:0008175,GO:0008649,GO:0008757,GO:0009451,GO:0009987,GO:0010467,GO:0016070,GO:0016072,GO:0016740,GO:0016741,GO:0022613,GO:0030488,GO:0031167,GO:0032259,GO:0034470,GO:0034641,GO:0034660,GO:0042254,GO:0043170,GO:0043412,GO:0043414,GO:0044085,GO:0044237,GO:0044238,GO:0044260,GO:0046483,GO:0070475,GO:0071704,GO:0071840,GO:0090304,GO:0140098,GO:0140101,GO:0140102,GO:1901360 2.1.1.192 0.000000000000000000000000000000000000000000000000000000000000000000000000002821 255.0
DYD1_k127_1842477_0 PFAM Type I restriction enzyme R protein N terminus (HSDR_N) K01153 - 3.1.21.3 1.274e-211 664.0
DYD1_k127_1845123_0 DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates K03043 GO:0000428,GO:0005575,GO:0005622,GO:0005623,GO:0030880,GO:0032991,GO:0044424,GO:0044464,GO:0061695,GO:1902494,GO:1990234 2.7.7.6 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007641 367.0
DYD1_k127_1845123_1 Helix-hairpin-helix motif - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000001209 287.0
DYD1_k127_1845123_2 Forms part of the ribosomal stalk, playing a central role in the interaction of the ribosome with GTP-bound translation factors K02864 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000002186 259.0
DYD1_k127_1845123_3 Forms part of the ribosomal stalk which helps the ribosome interact with GTP-bound translation factors. Is thus essential for accurate translation K02935 - - 0.0000000000000000000000000000000000000000000000000002021 187.0
DYD1_k127_1845123_4 Binds directly to 23S rRNA. The L1 stalk is quite mobile in the ribosome, and is involved in E site tRNA release K02863 GO:0000470,GO:0003674,GO:0003676,GO:0003723,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0006139,GO:0006364,GO:0006396,GO:0006412,GO:0006518,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0015934,GO:0016070,GO:0016072,GO:0019538,GO:0022613,GO:0022625,GO:0022626,GO:0032991,GO:0034470,GO:0034641,GO:0034645,GO:0034660,GO:0042254,GO:0042273,GO:0043043,GO:0043170,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043603,GO:0043604,GO:0044085,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:0046483,GO:0071704,GO:0071840,GO:0090304,GO:0097159,GO:1901360,GO:1901363,GO:1901564,GO:1901566,GO:1901576,GO:1990904 - 0.00000000000000000000000000000000000000000000006846 169.0
DYD1_k127_1874717_0 ABC transporter K01990 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001466 467.0
DYD1_k127_1874717_1 S1/P1 Nuclease - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001073 415.0
DYD1_k127_1874717_2 ABC-type Na efflux pump, permease component K01992 - - 0.00000000000000000000000000000000000000000000000000000006765 202.0
DYD1_k127_1874717_3 ABC-type Na efflux pump, permease component K01992 - - 0.0000000001697 65.0
DYD1_k127_188329_0 TonB-linked outer membrane protein, SusC RagA family - - - 0.0 1159.0
DYD1_k127_188329_1 Bacterial regulatory proteins, deoR family - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003547 392.0
DYD1_k127_188329_2 Starch-binding associating with outer membrane - - - 0.000000000000000000000000002218 115.0
DYD1_k127_1890601_0 Belongs to the MurCDEF family K03802 - 6.3.2.29,6.3.2.30 8.27e-214 671.0
DYD1_k127_1890601_1 - - - - 0.0000000000000000000000000000000000000000002199 165.0
DYD1_k127_1892081_0 amidohydrolase - - - 0.0 1055.0
DYD1_k127_1892081_1 amidohydrolase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007826 535.0
DYD1_k127_1892081_2 Dioxygenase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000001872 248.0
DYD1_k127_1892081_3 signal-transduction protein containing cAMP-binding and CBS domains K10716 - - 0.00000000000000000000000000000000000000000000000000000000000001274 226.0
DYD1_k127_1892081_4 Acid phosphatase homologues K19302 - 3.6.1.27 0.00000000000000000000000000000000000000000005778 169.0
DYD1_k127_1898087_0 - - - - 0.000000000000000000000000000000000000000000000000000000000000000000004193 246.0
DYD1_k127_1898087_1 Tetratricopeptide repeat - - - 0.00000000000000000000001827 102.0
DYD1_k127_1898087_3 COG0624 Acetylornithine deacetylase Succinyl-diaminopimelate desuccinylase and related deacylases - - - 0.0001614 44.0
DYD1_k127_1898318_0 Belongs to the peptidase S41A family K03797 - 3.4.21.102 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001062 457.0
DYD1_k127_1898318_1 - - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000001515 277.0
DYD1_k127_1898318_2 Outer membrane protein beta-barrel family - - - 0.000000000000000000000000000000000006296 138.0
DYD1_k127_1898318_3 - - - - 0.0000006129 61.0
DYD1_k127_1898742_0 Belongs to the GarS family - - - 2.487e-199 634.0
DYD1_k127_1898742_1 Catalyzes the specific phosphorylation of 1,6-anhydro-N- acetylmuramic acid (anhMurNAc) with the simultaneous cleavage of the 1,6-anhydro ring, generating MurNAc-6-P. Is required for the utilization of anhMurNAc either imported from the medium or derived from its own cell wall murein, and thus plays a role in cell wall recycling K09001 - 2.7.1.170 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003175 520.0
DYD1_k127_1898742_2 uracil phosphoribosyltransferase K00761 - 2.4.2.9 0.0000000000000000000000000000000000000000000000000000000000000000004809 230.0
DYD1_k127_1898742_3 FIST N domain - - - 0.0000000000000000000000000000000000000000000000000000004288 198.0
DYD1_k127_1898742_4 - - - - 0.00001554 50.0
DYD1_k127_1898742_5 Adenylyl- / guanylyl cyclase, catalytic domain - - - 0.0008146 43.0
DYD1_k127_1903576_0 Penicillin amidase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003626 365.0
DYD1_k127_1903576_1 - - - - 0.0000000000000000000000000001788 124.0
DYD1_k127_190784_0 - - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007258 344.0
DYD1_k127_190784_1 Putative porin - - - 0.0000000000000002211 82.0
DYD1_k127_193723_0 Major Facilitator - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003919 592.0
DYD1_k127_193723_1 Oxidoreductase family, NAD-binding Rossmann fold - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002249 424.0
DYD1_k127_193723_2 Hydroxypyruvate isomerase K01816 - 5.3.1.22 0.000000000000000000000000000007873 120.0
DYD1_k127_1939263_0 COG1705 Muramidase (flagellum-specific) - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006001 343.0
DYD1_k127_1939263_1 O-methyltransferase K00588 - 2.1.1.104 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000001584 278.0
DYD1_k127_1939263_2 Belongs to the purine pyrimidine phosphoribosyltransferase family K00760 - 2.4.2.8 0.000000000000000000000000000000002448 131.0
DYD1_k127_1939263_3 Belongs to the sodium solute symporter (SSF) (TC 2.A.21) family - - - 0.000000000000000000000003027 103.0
DYD1_k127_1947427_0 PFAM GH3 auxin-responsive promoter - - - 9.456e-285 880.0
DYD1_k127_1947427_1 Methylenetetrahydrofolate reductase K00297 - 1.5.1.20 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004382 485.0
DYD1_k127_1947427_2 ABC transporter K06861 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003619 416.0
DYD1_k127_1947427_3 COGs COG1028 Dehydrogenase with different specificities (related to short-chain alcohol dehydrogenase) K00059 - 1.1.1.100 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002702 390.0
DYD1_k127_1947427_4 Patatin-like phospholipase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000008789 253.0
DYD1_k127_1947427_5 PPIC-type PPIASE domain K03771 - 5.2.1.8 0.000000000000000000000000000000000000007685 150.0
DYD1_k127_1947427_6 DUF167 K09131 - - 0.0000000003464 63.0
DYD1_k127_1951764_0 Glucose / Sorbosone dehydrogenase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001726 555.0
DYD1_k127_1974555_0 glucosamine N-acyltransferase K02536 - 2.3.1.191 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000141 451.0
DYD1_k127_1974555_1 CarboxypepD_reg-like domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000001039 261.0
DYD1_k127_1985984_0 Belongs to the class-II aminoacyl-tRNA synthetase family. Phe-tRNA synthetase alpha subunit type 1 subfamily K01889 GO:0003674,GO:0003824,GO:0004812,GO:0004826,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006082,GO:0006139,GO:0006399,GO:0006412,GO:0006418,GO:0006432,GO:0006518,GO:0006520,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0016070,GO:0016874,GO:0016875,GO:0019538,GO:0019752,GO:0034641,GO:0034645,GO:0034660,GO:0043038,GO:0043039,GO:0043043,GO:0043170,GO:0043436,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044281,GO:0044424,GO:0044464,GO:0046483,GO:0071704,GO:0090304,GO:0140098,GO:0140101,GO:1901360,GO:1901564,GO:1901566,GO:1901576 6.1.1.20 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001715 553.0
DYD1_k127_1985984_1 Belongs to the arginase family K01479 - 3.5.3.8 0.00005131 46.0
DYD1_k127_198605_0 COG1024 Enoyl-CoA hydratase carnithine racemase K13766 - 4.2.1.18 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000405 355.0
DYD1_k127_198605_1 PFAM HhH-GPD superfamily base excision DNA repair protein K01247 - 3.2.2.21 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000005697 286.0
DYD1_k127_198605_2 - - - - 0.000000000000000000000000000000000000000000000000007506 187.0
DYD1_k127_198605_3 Patatin-like phospholipase - - - 0.000000000000000000000000009098 114.0
DYD1_k127_198605_4 MaoC like domain K02618 - 1.2.1.91,3.3.2.12 0.0000000000000003726 79.0
DYD1_k127_1989198_0 Zinc phosphodiesterase, which displays some tRNA 3'- processing endonuclease activity. Probably involved in tRNA maturation, by removing a 3'-trailer from precursor tRNA K00784 GO:0003674,GO:0003824,GO:0004518,GO:0004519,GO:0004521,GO:0004540,GO:0006139,GO:0006396,GO:0006399,GO:0006725,GO:0006807,GO:0008033,GO:0008150,GO:0008152,GO:0009987,GO:0010467,GO:0016070,GO:0016787,GO:0016788,GO:0016891,GO:0016893,GO:0031123,GO:0034414,GO:0034470,GO:0034641,GO:0034660,GO:0042779,GO:0042780,GO:0042781,GO:0043170,GO:0043628,GO:0044237,GO:0044238,GO:0046483,GO:0071704,GO:0090304,GO:0090305,GO:0090501,GO:0090502,GO:0140098,GO:1901360,GO:1905267 3.1.26.11 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002889 404.0
DYD1_k127_1989198_1 Response regulator of the LytR AlgR family K02477 - - 0.00000000000000000000000000000000000000000000000000000000006693 214.0
DYD1_k127_1990576_0 Outer membrane protein beta-barrel family - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001712 614.0
DYD1_k127_1990576_1 PPIases accelerate the folding of proteins. It catalyzes the cis-trans isomerization of proline imidic peptide bonds in oligopeptides K03768 - 5.2.1.8 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000426 302.0
DYD1_k127_1991584_0 Peptidase S8 and S53 subtilisin kexin sedolisin - - - 4.78e-204 648.0
DYD1_k127_1991584_1 Belongs to the aldehyde dehydrogenase family K00128 - 1.2.1.3 0.000000000000000000000007671 100.0
DYD1_k127_1997759_0 potassium channel beta subunit - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007841 500.0
DYD1_k127_1997759_1 KR domain K13775 - - 0.0000000000000000000000000000003609 123.0
DYD1_k127_1999716_0 Belongs to the cytidylate kinase family. Type 1 subfamily K00945 GO:0003674,GO:0003824,GO:0004127,GO:0004592,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006082,GO:0006139,GO:0006520,GO:0006573,GO:0006575,GO:0006725,GO:0006732,GO:0006753,GO:0006766,GO:0006767,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009081,GO:0009108,GO:0009110,GO:0009117,GO:0009123,GO:0009165,GO:0009987,GO:0015939,GO:0015940,GO:0016053,GO:0016301,GO:0016310,GO:0016740,GO:0016772,GO:0016776,GO:0016874,GO:0016879,GO:0016881,GO:0018130,GO:0019205,GO:0019438,GO:0019637,GO:0019752,GO:0032787,GO:0033317,GO:0034641,GO:0034654,GO:0042364,GO:0042398,GO:0043436,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0044283,GO:0044424,GO:0044444,GO:0044464,GO:0046394,GO:0046483,GO:0046939,GO:0046940,GO:0050145,GO:0051186,GO:0051188,GO:0055086,GO:0071704,GO:0072330,GO:0090407,GO:1901293,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576,GO:1901605 2.7.4.25 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001566 334.0
DYD1_k127_1999716_1 with chaperone activity ATP-binding subunit K03696 - - 0.00000000000000000000000000000000000000000000009341 169.0
DYD1_k127_1999716_2 PFAM Transposase IS200 like - - - 0.000000000000000648 78.0
DYD1_k127_201799_0 ABC-type transport system involved in resistance to organic solvents periplasmic component K02067 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005025 315.0
DYD1_k127_201799_1 Ami_3 K01448 - 3.5.1.28 0.000007562 48.0
DYD1_k127_2024714_0 C-terminal domain of 1-Cys peroxiredoxin - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003885 394.0
DYD1_k127_2024714_1 Belongs to the cysteine synthase cystathionine beta- synthase family K01697,K01738,K12339 - 2.5.1.47,4.2.1.22 0.000000000000000000000000001951 111.0
DYD1_k127_2024714_2 Protein of unknown function (DUF3078) - - - 0.000000000000000006414 87.0
DYD1_k127_202978_0 2-oxoglutarate dehydrogenase, E1 K00164 - 1.2.4.2 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000655 578.0
DYD1_k127_202978_1 Binds directly to 16S ribosomal RNA K02968 - - 0.000000000002084 67.0
DYD1_k127_2039318_0 Tetratricopeptide repeat - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002263 617.0
DYD1_k127_2039318_1 C-terminal domain of CHU protein family - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000001225 301.0
DYD1_k127_2039318_2 GCN5 family acetyltransferase - - - 0.00000000000000000000000000000000000000000000000000000000007777 207.0
DYD1_k127_2039318_3 PFAM metallophosphoesterase - - - 0.00000000000000000000000000000000000000000000000000000186 199.0
DYD1_k127_2039318_4 Acetyltransferase (GNAT) domain K03790 - 2.3.1.128 0.00000000000000000000000000000000000000000000000000002167 193.0
DYD1_k127_2050593_0 Mediates influx of magnesium ions K03284 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001627 550.0
DYD1_k127_2050593_1 sterol desaturase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001055 381.0
DYD1_k127_2050593_2 Protein of unknown function (DUF2480) - - - 0.000000000000000000000000000000000000000000000000000000000000003191 220.0
DYD1_k127_2050593_3 Putative prokaryotic signal transducing protein - - - 0.000000000000000000000000000000000004431 140.0
DYD1_k127_2061324_0 Belongs to the peptidase S26 family K03100 - 3.4.21.89 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003361 494.0
DYD1_k127_2061324_1 MerR family K22491 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000001987 262.0
DYD1_k127_2061324_2 COG2204 Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains - - - 0.0000000000000002035 79.0
DYD1_k127_2074501_0 Smr domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001337 441.0
DYD1_k127_2079152_0 Belongs to the glycosyl hydrolase 3 family K05349 - 3.2.1.21 0.0 1063.0
DYD1_k127_2079152_1 Belongs to the glycosyl hydrolase 43 family - - - 2.351e-312 963.0
DYD1_k127_2079152_2 Participates in both transcription termination and antitermination K02600 - - 4.487e-236 734.0
DYD1_k127_2079152_3 PFAM sulfatase - - - 3.93e-197 625.0
DYD1_k127_2079152_4 PFAM Formylglycine-generating sulfatase enzyme - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001086 550.0
DYD1_k127_2079152_5 Endonuclease Exonuclease phosphatase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000004085 301.0
DYD1_k127_2079152_6 Required for maturation of 30S ribosomal subunits K09748 GO:0000028,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006412,GO:0006518,GO:0006807,GO:0006996,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0016043,GO:0019538,GO:0022607,GO:0022613,GO:0022618,GO:0034622,GO:0034641,GO:0034645,GO:0042254,GO:0042255,GO:0042274,GO:0043043,GO:0043170,GO:0043603,GO:0043604,GO:0043933,GO:0044085,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044424,GO:0044444,GO:0044464,GO:0065003,GO:0070925,GO:0071704,GO:0071826,GO:0071840,GO:1901564,GO:1901566,GO:1901576 - 0.000000000000000000000000000000000000000000008542 168.0
DYD1_k127_2087603_0 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase - - - 0.00000000000000000000000000000000000000000000535 179.0
DYD1_k127_2091766_0 PFAM Cytochrome c assembly protein K02195 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000586 364.0
DYD1_k127_2091766_1 PFAM Cytochrome c-type biogenesis protein CcmB K02194 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004955 307.0
DYD1_k127_2091766_2 - - - - 0.000000001086 63.0
DYD1_k127_2094722_0 Master enzyme that delivers sulfur to a number of partners involved in Fe-S cluster assembly, tRNA modification or cofactor biosynthesis. Catalyzes the removal of elemental sulfur atoms from cysteine to produce alanine. Functions as a sulfur delivery protein for Fe-S cluster synthesis onto IscU, an Fe-S scaffold assembly protein, as well as other S acceptor proteins K04487 - 2.8.1.7 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000989 581.0
DYD1_k127_2094722_1 transport system involved in gliding motility, auxiliary component K01992 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001476 514.0
DYD1_k127_2094722_2 TIGRFAM Gliding motility-associated ABC transporter permease protein GldF K01992 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001223 344.0
DYD1_k127_2094722_3 Integral membrane protein TerC K05794 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001456 306.0
DYD1_k127_2094722_4 Belongs to the HesB IscA family K13628 - - 0.000000000000000000000000000000000000000000000000000002895 192.0
DYD1_k127_2094722_5 PFAM Glyoxalase bleomycin resistance protein dioxygenase K05606 - 5.1.99.1 0.000000000000000000000000205 107.0
DYD1_k127_2107729_0 Required for the formation of a threonylcarbamoyl group on adenosine at position 37 (t(6)A37) in tRNAs that read codons beginning with adenine. Is involved in the transfer of the threonylcarbamoyl moiety of threonylcarbamoyl-AMP (TC-AMP) to the N6 group of A37, together with TsaE and TsaB. TsaD likely plays a direct catalytic role in this reaction K01409 GO:0000408,GO:0002949,GO:0005575,GO:0005622,GO:0005623,GO:0006139,GO:0006396,GO:0006399,GO:0006400,GO:0006725,GO:0006807,GO:0008033,GO:0008150,GO:0008152,GO:0009451,GO:0009987,GO:0010467,GO:0016070,GO:0032991,GO:0034470,GO:0034641,GO:0034660,GO:0043170,GO:0043412,GO:0044237,GO:0044238,GO:0044424,GO:0044464,GO:0046483,GO:0070525,GO:0071704,GO:0090304,GO:1901360 2.3.1.234 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001031 518.0
DYD1_k127_2107729_1 ABC-type antimicrobial peptide transport system, permease component K02004 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002413 510.0
DYD1_k127_2115820_0 3'-5' exoribonuclease that releases 5'-nucleoside monophosphates and is involved in maturation of structured RNAs K12573,K12585 - - 3.235e-224 705.0
DYD1_k127_2115820_1 Thioredoxin reductase K00384 - 1.8.1.9 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001612 550.0
DYD1_k127_2115820_2 Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released K03086 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003588 541.0
DYD1_k127_2115820_3 Transfers the gamma-phosphate of ATP to the 4'-position of a tetraacyldisaccharide 1-phosphate intermediate (termed DS-1- P) to form tetraacyldisaccharide 1,4'-bis-phosphate (lipid IVA) K00912 - 2.7.1.130 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007516 428.0
DYD1_k127_2115820_4 Domain of unknown function (DUF4249) - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001634 352.0
DYD1_k127_2115820_5 RNA methyltransferase, RsmD K08316 - 2.1.1.171 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000002156 279.0
DYD1_k127_2115820_6 Catalyzes the conversion of 7,8-dihydroneopterin to 6- hydroxymethyl-7,8-dihydropterin K00796,K00950,K01633,K13940 - 1.13.11.81,2.5.1.15,2.7.6.3,4.1.2.25,5.1.99.8 0.0000000000000000000000001251 109.0
DYD1_k127_2115820_7 Transfers the N-acyl diglyceride group on what will become the N-terminal cysteine of membrane lipoproteins K13292 - - 0.000000000000000000000002585 104.0
DYD1_k127_2115820_8 Protein of unknown function (DUF3822) - - - 0.0000000000000006645 88.0
DYD1_k127_2140856_0 alpha-2-macroglobulin domain protein K06894 - - 4.561e-286 889.0
DYD1_k127_2144633_0 Belongs to the ompA family - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000005085 306.0
DYD1_k127_2144633_2 (4S)-4-hydroxy-5-phosphonooxypentane-2,3-dione isomerase activity - - - 0.0000000000000000000000000000000000000000002486 159.0
DYD1_k127_2144633_3 COGs COG2141 Coenzyme F420-dependent N5 N10-methylene tetrahydromethanopterin reductase - - - 0.000000000000000000000000000000001575 130.0
DYD1_k127_2145273_0 Nitrilase cyanide hydratase and apolipoprotein N-acyltransferase - - - 1.908e-238 747.0
DYD1_k127_2145273_1 membrane - - - 0.000000000000000000001167 96.0
DYD1_k127_2145657_0 Glucose / Sorbosone dehydrogenase K21430 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001595 532.0
DYD1_k127_2145657_1 Belongs to the phosphoglycerate kinase family K00927 - 2.7.2.3 0.00000000000000000000000000000000000000000000000000000000000000000000000000002668 260.0
DYD1_k127_2145657_2 COG1512 Beta-propeller domains of methanol dehydrogenase type K06872 - - 0.00000000000000000000000000000000000000000000000000000000000000000000005159 248.0
DYD1_k127_2145657_3 InterPro IPR010287 - - - 0.00000000000000000000000000000000000000000000000000000000000000126 225.0
DYD1_k127_2145657_4 LemA family K03744 - - 0.00000000000000000000000000000000000000000000000000000000007181 212.0
DYD1_k127_2145657_5 Histidine kinase - - - 0.0000000000000000000000000000000000000000000000000000002463 198.0
DYD1_k127_2145657_6 TPM domain - - - 0.000000000000000000000000000000000000000000000000000002825 194.0
DYD1_k127_2145657_7 cheY-homologous receiver domain - - - 0.00000000000000000000000000001433 121.0
DYD1_k127_2158831_0 Catalyzes the synthesis of 5,6-dihydrouridine (D), a modified base found in the D-loop of most tRNAs, via the reduction of the C5-C6 double bond in target uridines - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000018 537.0
DYD1_k127_2158831_1 CAAX protease self-immunity K07052 - - 0.000000000000000000000000000000000000000000000000000000000000000000002919 249.0
DYD1_k127_2158831_2 Cytidylyltransferase family K00981 - 2.7.7.41 0.0000000000000000000000000000000000000000000000000000000000003186 214.0
DYD1_k127_2158831_3 - - - - 0.000000000000000000004666 94.0
DYD1_k127_2169766_0 Catalyzes the NAD( )-dependent oxidation of formate to carbon dioxide. Formate oxidation is the final step in the methanol oxidation pathway in methylotrophic microorganisms. Has a role in the detoxification of exogenous formate in non- methylotrophic organisms - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000006442 264.0
DYD1_k127_2169766_1 acyl-CoA dehydrogenase - - - 0.00000000000000000000000000000000000000000000000000005107 187.0
DYD1_k127_2169766_2 Domain of unknown function (DUF3471) - - - 0.00000000000000000000000000000000000000000000001126 184.0
DYD1_k127_2191329_0 - - - - 0.000000000000000000000000000000000000000000000000000000000000001434 231.0
DYD1_k127_2200274_0 PFAM tRNA synthetases class I (E and Q), catalytic domain K01886 - 6.1.1.18 5e-267 826.0
DYD1_k127_2209631_0 PFAM fumarylacetoacetate (FAA) hydrolase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001463 340.0
DYD1_k127_2209631_1 The natural substrate for this enzyme may be peptidyl- tRNAs which drop off the ribosome during protein synthesis K01056 GO:0003674,GO:0003824,GO:0004045,GO:0016787,GO:0016788,GO:0052689,GO:0140098,GO:0140101 3.1.1.29 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000004376 291.0
DYD1_k127_2210552_0 His Kinase A (phosphoacceptor) domain K07636 - 2.7.13.3 0.00000000000000000000000000000000000000000000000000000000000007244 223.0
DYD1_k127_2210552_1 isomerase - - - 0.000000000000000000000000000000000000000000000000000000000002741 213.0
DYD1_k127_2210552_2 Dehydrogenase - - - 0.00000000000000000007367 91.0
DYD1_k127_2220630_0 Histidine kinase - - - 0.00000000000000000000001498 100.0
DYD1_k127_2220630_1 Histidine kinase - - - 0.00000000000000000002497 102.0
DYD1_k127_2221977_0 Glycosyl hydrolases family 15 K01178 - 3.2.1.3 2.019e-232 732.0
DYD1_k127_2221977_1 Trehalose-phosphatase K16055 - 2.4.1.15,3.1.3.12 0.000000000000000000000000000000000000000000000000000002911 195.0
DYD1_k127_224769_0 chaperone-mediated protein folding K20543 - - 0.0000000000000000000000000000000000000000001 175.0
DYD1_k127_224769_1 A type II topoisomerase that negatively supercoils closed circular double-stranded (ds) DNA in an ATP-dependent manner to modulate DNA topology and maintain chromosomes in an underwound state. Negative supercoiling favors strand separation, and DNA replication, transcription, recombination and repair, all of which involve strand separation. Also able to catalyze the interconversion of other topological isomers of dsDNA rings, including catenanes and knotted rings. Type II topoisomerases break and join 2 DNA strands simultaneously in an ATP-dependent manner K02469 - 5.99.1.3 0.00000000000000000001014 93.0
DYD1_k127_225783_0 The UvrABC repair system catalyzes the recognition and processing of DNA lesions. UvrA is an ATPase and a DNA-binding protein. A damage recognition complex composed of 2 UvrA and 2 UvrB subunits scans DNA for abnormalities. When the presence of a lesion has been verified by UvrB, the UvrA molecules dissociate K03701 - - 0.0 1412.0
DYD1_k127_225783_1 Belongs to the sigma-70 factor family. ECF subfamily K03088 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007269 322.0
DYD1_k127_225783_2 Cytochrome c biogenesis protein transmembrane region K04084 - 1.8.1.8 0.0000000000000000000000000000000000000000000000000000000000000002354 224.0
DYD1_k127_2261925_0 Cell wall formation. Catalyzes the addition of glutamate to the nucleotide precursor UDP-N-acetylmuramoyl-L-alanine (UMA) K01925 - 6.3.2.9 2.054e-214 672.0
DYD1_k127_2262162_0 Penicillin amidase - - - 1.911e-246 769.0
DYD1_k127_2262162_1 PFAM D-aminoacylase, C-terminal region K06015 - 3.5.1.81 9.07e-235 735.0
DYD1_k127_2277883_0 Peptidase S46 - GO:0003674,GO:0003824,GO:0004177,GO:0005488,GO:0005575,GO:0005576,GO:0005623,GO:0006508,GO:0006518,GO:0006807,GO:0008150,GO:0008152,GO:0008233,GO:0008236,GO:0008238,GO:0008239,GO:0009056,GO:0009279,GO:0009986,GO:0009987,GO:0016020,GO:0016049,GO:0016787,GO:0017171,GO:0019538,GO:0019867,GO:0030154,GO:0030312,GO:0030313,GO:0031975,GO:0032502,GO:0033218,GO:0034641,GO:0040007,GO:0042277,GO:0043170,GO:0043171,GO:0043603,GO:0044237,GO:0044238,GO:0044248,GO:0044462,GO:0044464,GO:0048468,GO:0048588,GO:0048589,GO:0048856,GO:0048869,GO:0070011,GO:0071704,GO:0071944,GO:0140096,GO:1901564,GO:1901565,GO:1901575 - 0.00000000002368 63.0
DYD1_k127_2285090_0 Catalyzes the transfer of a ribosyl phosphate group from 5-phosphoribose 1-diphosphate to orotate, leading to the formation of orotidine monophosphate (OMP) K00762,K13421 - 2.4.2.10,4.1.1.23 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005492 330.0
DYD1_k127_2285090_1 Belongs to the Nudix hydrolase family - - - 0.00000000000000000000000000000000000000000000000000000000000000000000004008 246.0
DYD1_k127_2285090_2 protein possibly involved in aromatic compounds catabolism K19222 - 3.1.2.28 0.0000000000000000000000000000000000000000000000000000000000001172 215.0
DYD1_k127_2285090_3 Reversibly transfers an adenylyl group from ATP to 4'- phosphopantetheine, yielding dephospho-CoA (dPCoA) and pyrophosphate K00954 - 2.7.7.3 0.0000000000000000000000000000000000000000000006579 166.0
DYD1_k127_2285090_4 mercury ion transmembrane transporter activity K08364 - - 0.0000000000000000000000000000001044 127.0
DYD1_k127_228807_0 ATP-dependent DNA helicase RecQ K03654 - 3.6.4.12 0.0 1232.0
DYD1_k127_228807_1 mannose-1-phosphate guanylyltransferase K00971 - 2.7.7.13 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001359 564.0
DYD1_k127_228807_2 membrane - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001325 377.0
DYD1_k127_228807_3 3'-5' exonuclease related to the exonuclease domain of PolB K07501 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003966 363.0
DYD1_k127_228807_4 PFAM Aminotransferase class I and II K14287 - 2.6.1.88 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002334 317.0
DYD1_k127_228807_5 PFAM methyladenine glycosylase K01246 - 3.2.2.20 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000002438 291.0
DYD1_k127_228807_6 Endoribonuclease L-PSP - - - 0.000000000000000000000000000000000000000000000000000002566 193.0
DYD1_k127_228807_7 YjbR - - - 0.000000000000000000000000000000000000000000002136 166.0
DYD1_k127_228807_8 succinate dehydrogenase or fumarate reductase, flavoprotein K00239 - 1.3.5.1,1.3.5.4 0.000000001582 59.0
DYD1_k127_2294338_0 COGs COG2270 Permease of the major facilitator superfamily K06902 - - 1.197e-194 612.0
DYD1_k127_2294338_1 Catalyzes the dephosphorylation of undecaprenyl diphosphate (UPP). Confers resistance to bacitracin K06153 - 3.6.1.27 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000002601 285.0
DYD1_k127_2297713_0 COGs COG1807 4-amino-4-deoxy-L-arabinose transferase and related glycosyltransferase of PMT family - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001896 355.0
DYD1_k127_2297713_1 PFAM Uncharacterised BCR, COG1649 - - - 0.0000000000000000000000000000000000000000007047 166.0
DYD1_k127_2298057_0 Component of the acetyl coenzyme A carboxylase (ACC) complex. First, biotin carboxylase catalyzes the carboxylation of biotin on its carrier protein (BCCP) and then the CO(2) group is transferred by the carboxyltransferase to acetyl-CoA to form malonyl-CoA K01962 - 2.1.3.15,6.4.1.2 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001239 503.0
DYD1_k127_2298057_1 Belongs to the short-chain dehydrogenases reductases (SDR) family K07124 - - 0.0000000003595 63.0
DYD1_k127_2304875_0 Lipid A 3-O-deacylase (PagL) - - - 0.0000000000000000000000000000000000000000000003031 172.0
DYD1_k127_2304875_1 Methyltransferase FkbM domain - - - 0.0000000000000000000000000000000009379 137.0
DYD1_k127_2323713_0 two component, sigma54 specific, transcriptional regulator, Fis family K07713 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001062 444.0
DYD1_k127_2323713_1 Histidine kinase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000001492 268.0
DYD1_k127_2323713_2 Low affinity iron permease - - - 0.000000000000000000000000000000000000000000001642 169.0
DYD1_k127_2323713_3 PAS fold - - - 0.0000000000000000000000000000000000000005159 158.0
DYD1_k127_2323713_4 Cupin 2, conserved barrel domain protein - - - 0.0000000000000000000000000000000003945 137.0
DYD1_k127_2323713_5 PAS fold - - - 0.000000000000000000000000000002433 124.0
DYD1_k127_2323713_6 cheY-homologous receiver domain - - - 0.0000000000000000000004243 101.0
DYD1_k127_2323713_7 - - - - 0.0000000000000000001066 89.0
DYD1_k127_2326410_0 Belongs to the pirin family K06911 - - 0.00000000000000000000000000000000002814 137.0
DYD1_k127_2326410_1 SnoaL-like domain - - - 0.000000000000000000000001739 106.0
DYD1_k127_2326530_0 Succinate dehydrogenase or fumarate reductase, flavoprotein subunit K00239 - 1.3.5.1,1.3.5.4 0.0 1070.0
DYD1_k127_2326530_1 Succinate dehydrogenase fumarate reductase Fe-S protein subunit K00240 - 1.3.5.1,1.3.5.4 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001108 457.0
DYD1_k127_2326530_2 Succinate dehydrogenase or fumarate reductase, flavoprotein subunit K00239 - 1.3.5.1,1.3.5.4 0.000000000000000001002 86.0
DYD1_k127_2327247_0 TamB, inner membrane protein subunit of TAM complex - - - 0.0 1505.0
DYD1_k127_2327247_1 Catalyzes the conversion of D-ribulose 5-phosphate to formate and 3,4-dihydroxy-2-butanone 4-phosphate K14652 - 3.5.4.25,4.1.99.12 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002649 361.0
DYD1_k127_2327247_2 Protein of unknown function (DUF1572) - - - 0.00000000000003324 72.0
DYD1_k127_2327247_3 Outer membrane protein beta-barrel domain - - - 0.000002012 57.0
DYD1_k127_2331417_0 Serine dehydratase K01752 - 4.3.1.17 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000002978 277.0
DYD1_k127_2331417_2 Peptidyl-prolyl cis-trans isomerase K03772 - 5.2.1.8 0.000000000000000000000000000001341 126.0
DYD1_k127_2333908_0 Belongs to the glycosyl hydrolase 13 family - - - 1.603e-268 842.0
DYD1_k127_2333908_1 Belongs to the glycosyl hydrolase 13 family K21575 GO:0003674,GO:0003824,GO:0004553,GO:0005575,GO:0005623,GO:0005886,GO:0016020,GO:0016787,GO:0016798,GO:0031216,GO:0044464,GO:0071944 3.2.1.135 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003962 546.0
DYD1_k127_2334216_0 TonB-linked outer membrane protein, SusC RagA family - - - 0.0 1168.0
DYD1_k127_2334216_1 Starch-binding associating with outer membrane - - - 0.00000000000000000000000000000000000004072 146.0
DYD1_k127_2334216_2 PFAM FecR protein - - - 0.0000000001587 63.0
DYD1_k127_2342337_0 Glycosyl hydrolases family 2, TIM barrel domain K01190 - 3.2.1.23 0.0 1838.0
DYD1_k127_2342337_1 Belongs to the sodium solute symporter (SSF) (TC 2.A.21) family K03307 - - 3.301e-258 806.0
DYD1_k127_2342337_2 SusE outer membrane protein K21571 - - 0.0000000000000000000000000000000000000000000000002913 184.0
DYD1_k127_2342337_3 ASPIC and UnbV - - - 0.0000000000000000000000000007798 131.0
DYD1_k127_2346661_0 Belongs to the glyceraldehyde-3-phosphate dehydrogenase family K00134 - 1.2.1.12 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009489 601.0
DYD1_k127_2346661_1 Belongs to the phosphoglycerate kinase family K00927 - 2.7.2.3 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003778 432.0
DYD1_k127_2346661_2 Catalyzes the dehydration of D-mannonate K01686 GO:0003674,GO:0003824,GO:0005488,GO:0005506,GO:0005975,GO:0005996,GO:0006063,GO:0006064,GO:0006082,GO:0008150,GO:0008152,GO:0008198,GO:0008927,GO:0009056,GO:0009987,GO:0016052,GO:0016054,GO:0016829,GO:0016835,GO:0016836,GO:0019585,GO:0019752,GO:0030145,GO:0032787,GO:0042839,GO:0042840,GO:0043167,GO:0043169,GO:0043436,GO:0044237,GO:0044238,GO:0044248,GO:0044281,GO:0044282,GO:0046365,GO:0046395,GO:0046872,GO:0046914,GO:0071704,GO:0072329,GO:1901575 4.2.1.8 0.000000000000002748 76.0
DYD1_k127_235103_0 COGs COG2197 Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain - - - 0.00000000000000000000000000000000000000000000000000000000000000001501 228.0
DYD1_k127_235103_1 - - - - 0.000000000000000000000000000002126 137.0
DYD1_k127_235103_2 Catalyzes the pyruvoyl-dependent decarboxylation of aspartate to produce beta-alanine K01579 - 4.1.1.11 0.00000000000000000000000000003791 117.0
DYD1_k127_235103_3 Subtilase family - - - 0.0000000000000000000000000418 115.0
DYD1_k127_235103_4 Catalyzes the pyruvoyl-dependent decarboxylation of aspartate to produce beta-alanine K01579 - 4.1.1.11 0.000000001593 59.0
DYD1_k127_2357774_0 Catalyzes the interconversion of L-alanine and D- alanine. May also act on other amino acids K01775,K01929 - 5.1.1.1,6.3.2.10 7.699e-284 896.0
DYD1_k127_2357774_1 This protein specifically catalyzes the removal of signal peptides from prolipoproteins K03101 - 3.4.23.36 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002957 316.0
DYD1_k127_2357774_2 Integral membrane protein TerC K05794 - - 0.0000000000000000000000000000000000001092 144.0
DYD1_k127_2382558_0 Amidohydrolase family - - - 7.577e-285 880.0
DYD1_k127_2382558_1 Berberine and berberine like - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003997 613.0
DYD1_k127_2382558_2 Amino acid permease K03294,K03758 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001905 421.0
DYD1_k127_2382558_3 Nucleotidase that shows phosphatase activity on nucleoside 5'-monophosphates K03787 - 3.1.3.5 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001072 379.0
DYD1_k127_2382558_4 Belongs to the class-I aminoacyl-tRNA synthetase family K01883 GO:0000166,GO:0003674,GO:0003824,GO:0004812,GO:0004817,GO:0005488,GO:0005524,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006082,GO:0006139,GO:0006399,GO:0006412,GO:0006418,GO:0006423,GO:0006518,GO:0006520,GO:0006725,GO:0006807,GO:0008144,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0016070,GO:0016874,GO:0016875,GO:0017076,GO:0019538,GO:0019752,GO:0030554,GO:0032553,GO:0032555,GO:0032559,GO:0034641,GO:0034645,GO:0034660,GO:0035639,GO:0036094,GO:0043038,GO:0043039,GO:0043043,GO:0043167,GO:0043168,GO:0043170,GO:0043436,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044281,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0071704,GO:0090304,GO:0097159,GO:0097367,GO:0140098,GO:0140101,GO:1901265,GO:1901360,GO:1901363,GO:1901564,GO:1901566,GO:1901576 6.1.1.16 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002588 355.0
DYD1_k127_2382558_5 PFAM Diacylglycerol kinase, catalytic - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009972 310.0
DYD1_k127_2382558_6 PFAM HhH-GPD superfamily base excision DNA repair protein K01247 - 3.2.2.21 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000007008 287.0
DYD1_k127_2382558_7 Protein of unknown function (DUF4242) - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000008859 256.0
DYD1_k127_2382558_8 Acetyltransferase (GNAT) domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000006783 239.0
DYD1_k127_2382558_9 Beta-propeller domains of methanol dehydrogenase type K06872 - - 0.0000000000000000000000000003365 121.0
DYD1_k127_2392047_0 Acetyltransferase (GNAT) domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000003075 248.0
DYD1_k127_2392047_1 Acetyltransferase (GNAT) domain - - - 0.000000000000000000000000000000000000000000002794 169.0
DYD1_k127_2392047_2 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily - - - 0.00000000000000000000000000000000000000000008457 162.0
DYD1_k127_2392047_3 Peptidase M61 - - - 0.0000000000000000000001198 101.0
DYD1_k127_2402385_0 Predicted membrane protein (DUF2231) - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005538 312.0
DYD1_k127_2402385_1 COGs COG1235 Metal-dependent hydrolase of the beta-lactamase superfamily I - - - 0.00000000000000000000000000000000000000000000000000000000000000001051 228.0
DYD1_k127_2402385_3 - - - - 0.0000000000000000000000000000000000000000000296 175.0
DYD1_k127_2402385_4 CHRD domain - - - 0.00000000000002741 79.0
DYD1_k127_240723_0 Binds and transfers iron-sulfur (Fe-S) clusters to target apoproteins. Can hydrolyze ATP K03593 - - 3.254e-196 616.0
DYD1_k127_240723_1 3-hydroxyacyl-CoA dehydrogenase K00074 - 1.1.1.157 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003642 468.0
DYD1_k127_240723_2 Metal-dependent hydrolase K03392 - 4.1.1.45 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001847 436.0
DYD1_k127_240723_3 PFAM Short-chain dehydrogenase reductase SDR K00059 - 1.1.1.100 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001167 370.0
DYD1_k127_240723_4 Belongs to the aldehyde dehydrogenase family K10217 - 1.2.1.32,1.2.1.85 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003076 334.0
DYD1_k127_240723_5 CarboxypepD_reg-like domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000122 285.0
DYD1_k127_240723_6 Catalyzes the oxidative ring opening of 3- hydroxyanthranilate to 2-amino-3-carboxymuconate semialdehyde, which spontaneously cyclizes to quinolinate K00452 - 1.13.11.6 0.0000000000000000000000000000000000000000000000000000000000000000000000000000005215 267.0
DYD1_k127_240723_7 Putative FMN-binding domain K07734 - - 0.000000000000000000000000000000000000000000000000000000000000003033 223.0
DYD1_k127_240723_8 Converts 2,5-diamino-6-(ribosylamino)-4(3h)-pyrimidinone 5'-phosphate into 5-amino-6-(ribosylamino)-2,4(1h,3h)- pyrimidinedione 5'-phosphate K11752 - 1.1.1.193,3.5.4.26 0.00000000000007745 74.0
DYD1_k127_241078_0 Na+/Pi-cotransporter K03324 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004054 411.0
DYD1_k127_241078_1 TIGRFAM ATPase, P-type, K Mg Cd Cu Zn Na Ca Na H-transporter K01537 - 3.6.3.8 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005952 392.0
DYD1_k127_241078_11 YtxH-like protein - - - 0.00000000000003459 74.0
DYD1_k127_241078_12 - - - - 0.000000000003827 70.0
DYD1_k127_241078_2 Sodium/calcium exchanger protein K07301 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003325 366.0
DYD1_k127_241078_3 translation release factor activity - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004517 349.0
DYD1_k127_241078_4 COGs COG3467 flavin-nucleotide-binding protein K07005 - - 0.000000000000000000000000000000000000000000000000000000000000000000000003211 247.0
DYD1_k127_241078_5 UspA domain-containing protein - - - 0.0000000000000000000000000000000000000000000000000000000000000001424 231.0
DYD1_k127_241078_6 Iron-storage protein, whose ferroxidase center binds Fe(2 ) ions, oxidizes them by dioxygen to Fe(3 ), and participates in the subsequent Fe(3 ) oxide mineral core formation within the central cavity of the protein complex K03594 GO:0003674,GO:0003824,GO:0004322,GO:0005575,GO:0005576,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005886,GO:0006873,GO:0006875,GO:0006879,GO:0008150,GO:0008152,GO:0009987,GO:0010035,GO:0010038,GO:0010039,GO:0016020,GO:0016491,GO:0016722,GO:0016724,GO:0019725,GO:0030003,GO:0033212,GO:0033214,GO:0042221,GO:0042592,GO:0044424,GO:0044444,GO:0044464,GO:0046916,GO:0048878,GO:0050801,GO:0050896,GO:0055065,GO:0055072,GO:0055076,GO:0055080,GO:0055082,GO:0055114,GO:0065007,GO:0065008,GO:0071944,GO:0098771 1.16.3.1 0.00000000000000000000000000000000000000000000000000000005861 199.0
DYD1_k127_241078_7 Belongs to the universal stress protein A family - - - 0.00000000000000000000000000000000000000004478 163.0
DYD1_k127_241078_8 Thioredoxin K03671 - - 0.000000000000000000000000000004446 122.0
DYD1_k127_241078_9 Putative Actinobacterial Holin-X, holin superfamily III - - - 0.0000000000000000000000000006929 116.0
DYD1_k127_2410978_0 OST-HTH/LOTUS domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002293 379.0
DYD1_k127_2410978_1 Glycosyl hydrolase-like 10 - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000001003 276.0
DYD1_k127_2424521_0 Protein of unknown function (DUF1501) - - - 1.351e-213 675.0
DYD1_k127_2424521_1 TonB-dependent receptor K02014 - - 0.000000000000000000000000000000000000527 143.0
DYD1_k127_2424521_2 Protein of unknown function (DUF1800) - - - 0.0000000000000000000000000000009303 125.0
DYD1_k127_2429080_0 May nick specific sequences that contain T G mispairs resulting from m5C-deamination K07458 - - 0.0000000000000000000000008618 104.0
DYD1_k127_2429080_1 - - - - 0.00000000000000000001225 97.0
DYD1_k127_2435441_0 hydrolase activity, acting on ester bonds K01259 - 3.4.11.5 0.000000000000000000000000000000000000000001727 169.0
DYD1_k127_2435441_1 Alpha/beta hydrolase family - - - 0.0001944 45.0
DYD1_k127_24442_0 hemolysin activation secretion protein - - - 0.0 1242.0
DYD1_k127_24442_1 beta-lactamase domain protein - - - 0.0006651 42.0
DYD1_k127_2444544_0 LmbE family - - - 1.27e-198 631.0
DYD1_k127_2444544_1 PFAM Zinc carboxypeptidase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002342 317.0
DYD1_k127_2494373_0 Part of the phosphoribosylformylglycinamidine synthase complex involved in the purines biosynthetic pathway. Catalyzes the ATP-dependent conversion of formylglycinamide ribonucleotide (FGAR) and glutamine to yield formylglycinamidine ribonucleotide (FGAM) and glutamate. The FGAM synthase complex is composed of three subunits. PurQ produces an ammonia molecule by converting glutamine to glutamate. PurL transfers the ammonia molecule to FGAR to form FGAM in an ATP-dependent manner. PurS interacts with PurQ and PurL and is thought to assist in the transfer of the ammonia molecule from PurQ to PurL K01952 - 6.3.5.3 1.818e-277 858.0
DYD1_k127_2494373_1 - - - - 0.000000000000000000000000000000000000000000000000000000004011 205.0
DYD1_k127_251830_0 Cytochrome c - - - 0.000000000000000000000000000000000000000000000000000000000000000003383 233.0
DYD1_k127_251830_2 Cytochrome c - - - 0.000000000000000000000000000005554 122.0
DYD1_k127_251830_3 Belongs to the UPF0312 family - - - 0.0000000000000000000000000858 108.0
DYD1_k127_251830_5 - - - - 0.00000000000000000000005509 100.0
DYD1_k127_2519787_0 L,D-transpeptidase catalytic domain - - - 0.00000000000000000000000000000000000000000000000000000000000001133 221.0
DYD1_k127_2519787_1 - - - - 0.0000000000000000000000000000000000000003875 150.0
DYD1_k127_2519787_2 Serine aminopeptidase, S33 K06889 - - 0.00000000000000000000001723 103.0
DYD1_k127_2525091_0 histidine kinase DNA gyrase B - - - 0.0001182 54.0
DYD1_k127_2528917_0 PFAM Multi antimicrobial extrusion protein MatE K03327 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003988 448.0
DYD1_k127_2528917_1 calcium- and calmodulin-responsive adenylate cyclase activity K01406 - 3.4.24.40 0.000000000000000000000000000000000000000000000000000000000000000000000000000001666 276.0
DYD1_k127_2528917_2 Pfam ORF6N domain - - - 0.00000000000000000000000000000000000000000000000000000009087 199.0
DYD1_k127_2528917_3 Domain of unknown function (DUF4918) - - - 0.00000000000000000000000000000000006673 136.0
DYD1_k127_2528917_4 Domain of unknown function (DUF4918) - - - 0.000000000000000000000000008912 113.0
DYD1_k127_2528917_5 SPTR Peptidase S8 and S53 subtilisin kexin sedolisin - - - 0.0000001443 61.0
DYD1_k127_2528917_6 type III restriction protein res subunit K01153 - 3.1.21.3 0.0000017 50.0
DYD1_k127_253973_0 Radical SAM - - - 1.377e-200 629.0
DYD1_k127_253973_1 2'-5' RNA ligase superfamily - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000005963 265.0
DYD1_k127_253973_2 Belongs to the peptidase S24 family K03503 - - 0.00000000000000000000000000000000000000000000000000000003563 199.0
DYD1_k127_253973_3 META domain - - - 0.000003462 50.0
DYD1_k127_253973_4 COGs COG0389 Nucleotidyltransferase DNA polymerase involved in DNA repair K03502 - - 0.0001028 45.0
DYD1_k127_2541187_0 Belongs to the class I-like SAM-binding methyltransferase superfamily. RNA M5U methyltransferase family K03215 - 2.1.1.190 1.686e-223 701.0
DYD1_k127_2541187_1 Belongs to the class-I aminoacyl-tRNA synthetase family K01883 GO:0000166,GO:0003674,GO:0003824,GO:0004812,GO:0004817,GO:0005488,GO:0005524,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006082,GO:0006139,GO:0006399,GO:0006412,GO:0006418,GO:0006423,GO:0006518,GO:0006520,GO:0006725,GO:0006807,GO:0008144,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0016070,GO:0016874,GO:0016875,GO:0017076,GO:0019538,GO:0019752,GO:0030554,GO:0032553,GO:0032555,GO:0032559,GO:0034641,GO:0034645,GO:0034660,GO:0035639,GO:0036094,GO:0043038,GO:0043039,GO:0043043,GO:0043167,GO:0043168,GO:0043170,GO:0043436,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044281,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0071704,GO:0090304,GO:0097159,GO:0097367,GO:0140098,GO:0140101,GO:1901265,GO:1901360,GO:1901363,GO:1901564,GO:1901566,GO:1901576 6.1.1.16 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001314 546.0
DYD1_k127_2541187_2 PFAM alkyl hydroperoxide reductase Thiol specific antioxidant Mal allergen - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001497 446.0
DYD1_k127_2541187_3 endonuclease exonuclease phosphatase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002251 402.0
DYD1_k127_2541187_4 Rhomboid family - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001057 322.0
DYD1_k127_2541187_5 Rhomboid family K09650 - 3.4.21.105 0.0000000000000000000000000000000000000000000000000000000000000000000000000006133 261.0
DYD1_k127_255788_0 ABC transporter K06147 - - 4.484e-283 879.0
DYD1_k127_255788_1 TonB-dependent receptor K02014 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000003277 261.0
DYD1_k127_255788_2 Protein of unknown function (DUF2721) - - - 0.000000000000000000000000000000000007174 140.0
DYD1_k127_255788_3 PQQ-like domain K05889 - 1.1.2.6 0.000000000000000000000000001261 115.0
DYD1_k127_255788_4 magnesium chelatase K07391 - - 0.000000000000000000001118 97.0
DYD1_k127_255788_5 Rhodanese Homology Domain - - - 0.000000000000000000002415 96.0
DYD1_k127_2565710_0 Radical SAM domain protein - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001862 580.0
DYD1_k127_2565710_1 PFAM Allophanate hydrolase subunit 1 K06351 - - 0.00000000000000000000000000000000000000000000000000000000001507 214.0
DYD1_k127_2565710_2 PFAM Allophanate hydrolase subunit 2 K06350 - - 0.000000000000000000000000000000000000000000000000000009308 194.0
DYD1_k127_2565710_3 DinB family - - - 0.000000000000000000000000000000000002006 143.0
DYD1_k127_2565710_4 Protein conserved in bacteria - - - 0.0000000004683 62.0
DYD1_k127_2573324_0 Belongs to the KdsA family K01627 - 2.5.1.55 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003437 449.0
DYD1_k127_2573324_1 Transaldolase/Fructose-6-phosphate aldolase K00616 - 2.2.1.2 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001366 451.0
DYD1_k127_2573324_2 Activates KDO (a required 8-carbon sugar) for incorporation into bacterial lipopolysaccharide in Gram-negative bacteria K00979 - 2.7.7.38 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000004637 301.0
DYD1_k127_2573324_3 Involved in the biosynthesis of lipopolysaccharides (LPSs). Catalyzes the hydrolysis of 3-deoxy-D-manno-octulosonate 8-phosphate (KDO 8-P) to 3-deoxy-D-manno-octulosonate (KDO) and inorganic phosphate K03270 - 3.1.3.45 0.0000000000000000000000000000000000000000000000000000001091 202.0
DYD1_k127_2573324_4 PFAM NAD dependent epimerase dehydratase family - - - 0.0000000000000000000000000000000000000003042 150.0
DYD1_k127_2584472_0 ATPase, P-type (transporting), HAD superfamily, subfamily IC K01533,K17686 - 3.6.3.4,3.6.3.54 0.0 1048.0
DYD1_k127_2584472_1 copper resistance - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004201 501.0
DYD1_k127_2584472_2 exo-alpha-(2->6)-sialidase activity - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005653 464.0
DYD1_k127_2584472_3 Iron-dependent repressor K03709 - - 0.000000000000000000000000000000000000000002447 160.0
DYD1_k127_2584472_4 Thioredoxin-like - - - 0.0000000000000000000000000000000000002723 146.0
DYD1_k127_2584472_5 Haem-binding domain - - - 0.000000000000000000000002709 104.0
DYD1_k127_2595997_0 Glycosyl transferase family 2 - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004435 351.0
DYD1_k127_2595997_1 - - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000003934 291.0
DYD1_k127_2595997_2 PFAM AhpC TSA family - - - 0.0000000000000000000000000000000000000000000000000000000000000000001865 231.0
DYD1_k127_2595997_3 PFAM Uncharacterised protein family (UPF0104) K07027 - - 0.0000000000000000000000000000000005856 136.0
DYD1_k127_2595997_4 Conserved repeat domain - - - 0.000000000000003982 88.0
DYD1_k127_2599054_0 alanine dehydrogenase K00259 - 1.4.1.1 5.148e-227 707.0
DYD1_k127_2599054_1 ATPase, P-type, K Mg Cd Cu Zn Na Ca Na H-transporter K17686 - 3.6.3.54 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005952 614.0
DYD1_k127_2599054_2 transcriptional regulator (AraC family) - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005717 499.0
DYD1_k127_2599054_3 Involved in the biosynthesis of lipid A, a phosphorylated glycolipid that anchors the lipopolysaccharide to the outer membrane of the cell K00677 - 2.3.1.129 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000637 460.0
DYD1_k127_2599054_4 iron-regulated protein - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000002364 285.0
DYD1_k127_2599054_5 Iron-storage protein K02217 - 1.16.3.2 0.000000000000000000000000000000000000000000000000000000000000000000000000004051 255.0
DYD1_k127_2599054_6 PFAM ABC transporter K02193 - 3.6.3.41 0.0000000000000000000000000000000000000000000009042 173.0
DYD1_k127_2599054_7 Threonylcarbamoyl adenosine biosynthesis protein TsaE K06925 - - 0.0000000000000000000000000000000000000000000539 164.0
DYD1_k127_2600088_0 Peptidase inhibitor I9 - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000001108 287.0
DYD1_k127_2622739_0 phosphate transporter - - - 1.505e-231 733.0
DYD1_k127_2626662_0 Male sterility protein K12454 - 5.1.3.10 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009296 439.0
DYD1_k127_2626662_1 transferase activity, transferring glycosyl groups - - - 0.000000000000000000000000000000000000000000000000000000000000000000001204 249.0
DYD1_k127_2659483_0 3-demethylubiquinone-9 3-methyltransferase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002723 331.0
DYD1_k127_2659483_1 3-demethylubiquinone-9 3-methyltransferase K04750 - - 0.000000000000000000000000000000000000000000000000000000000000002309 220.0
DYD1_k127_2659483_2 Domain of unknown function (DU1801) - - - 0.000000000000000008043 84.0
DYD1_k127_2659483_3 glyoxalase III activity - - - 0.000001989 50.0
DYD1_k127_2660323_0 Belongs to the peptidase S8 family - - - 0.000000000000000371 93.0
DYD1_k127_2669738_0 Starch-binding associating with outer membrane - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002934 507.0
DYD1_k127_2669738_1 ASPIC UnbV domain protein - - - 0.000000000000000000000000000000000000003553 149.0
DYD1_k127_2673681_0 Belongs to the MurCDEF family K01924 - 6.3.2.8 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009186 436.0
DYD1_k127_2673681_1 deaminase K01487 - 3.5.4.3 0.0000000000000000000000000000000000000000000000000000002339 198.0
DYD1_k127_2673681_2 DoxX family - - - 0.00000000000000000000001055 104.0
DYD1_k127_2691557_0 zinc metalloprotease K11749 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000006722 286.0
DYD1_k127_2691557_1 zinc metalloprotease K11749 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000004075 280.0
DYD1_k127_2691557_2 Catalyzes the NADP-dependent rearrangement and reduction of 1-deoxy-D-xylulose-5-phosphate (DXP) to 2-C-methyl-D-erythritol 4-phosphate (MEP) K00099 GO:0000166,GO:0003674,GO:0003824,GO:0005488,GO:0006081,GO:0006082,GO:0006090,GO:0006629,GO:0006644,GO:0006720,GO:0006721,GO:0006793,GO:0006796,GO:0008150,GO:0008152,GO:0008299,GO:0008610,GO:0008654,GO:0009058,GO:0009240,GO:0009987,GO:0016114,GO:0016491,GO:0016614,GO:0016616,GO:0019288,GO:0019637,GO:0019682,GO:0019752,GO:0030145,GO:0030604,GO:0032787,GO:0036094,GO:0043167,GO:0043168,GO:0043169,GO:0043436,GO:0044237,GO:0044238,GO:0044249,GO:0044255,GO:0044281,GO:0046490,GO:0046872,GO:0046914,GO:0048037,GO:0050661,GO:0050662,GO:0051483,GO:0051484,GO:0055114,GO:0070402,GO:0071704,GO:0090407,GO:0097159,GO:1901135,GO:1901265,GO:1901363,GO:1901576 1.1.1.267 0.0000000000000000000000000000000000000000000000000000000001317 204.0
DYD1_k127_2714697_0 calcium- and calmodulin-responsive adenylate cyclase activity - - - 0.00000000000000000000000000000000000000000000000434 175.0
DYD1_k127_2714697_1 Protein of Unknown function (DUF2784) - - - 0.00000000000000000000000000000000000000007687 154.0
DYD1_k127_2714697_2 - - - - 0.0001483 48.0
DYD1_k127_2737501_0 Oxidoreductase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001334 547.0
DYD1_k127_2737501_1 6-O-methylguanine DNA methyltransferase, DNA binding domain K00567,K10778 - 2.1.1.63 0.000000000000000000000000000000000000000000000000000000000000000404 223.0
DYD1_k127_2737501_2 cytidine and deoxycytidylate deaminase K01489 - 3.5.4.5 0.00000000000000000000000000000000000000000000000000000003205 201.0
DYD1_k127_2737501_3 Belongs to the peptidase S26 family K03100 - 3.4.21.89 0.0000000000000000000000000000000000000000000000004125 176.0
DYD1_k127_2737501_4 Export-related chaperone CsaA K06878 - - 0.0000000000000000000000000000000000000000006321 159.0
DYD1_k127_2749998_0 Tryptophanyl-tRNA synthetase K01867 - 6.1.1.2 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003296 513.0
DYD1_k127_2749998_1 deoxynucleoside kinase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001701 403.0
DYD1_k127_2749998_2 Involved in the gluconeogenesis. Catalyzes the conversion of oxaloacetate (OAA) to phosphoenolpyruvate (PEP) through direct phosphoryl transfer between the nucleoside triphosphate and OAA K01610 - 4.1.1.49 0.000000000000000000000000000000000000000000000000000000000000000000005525 236.0
DYD1_k127_2749998_3 ABC transporter K02003 - - 0.000000000000000000000000000000000001454 139.0
DYD1_k127_2749998_4 secreted Zn-dependent protease - - - 0.000000000000000000000000000000000006962 143.0
DYD1_k127_2749998_5 Allows the formation of correctly charged Asn-tRNA(Asn) or Gln-tRNA(Gln) through the transamidation of misacylated Asp- tRNA(Asn) or Glu-tRNA(Gln) in organisms which lack either or both of asparaginyl-tRNA or glutaminyl-tRNA synthetases. The reaction takes place in the presence of glutamine and ATP through an activated phospho-Asp-tRNA(Asn) or phospho-Glu-tRNA(Gln) K02435 - 6.3.5.6,6.3.5.7 0.00000000000000000000000000000000005057 136.0
DYD1_k127_2756826_0 Specifically methylates the N7 position of a guanine in 16S rRNA K03501 GO:0000154,GO:0001510,GO:0003674,GO:0003824,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006139,GO:0006364,GO:0006396,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0008168,GO:0008170,GO:0008173,GO:0008649,GO:0008757,GO:0009451,GO:0009987,GO:0010467,GO:0016070,GO:0016072,GO:0016435,GO:0016740,GO:0016741,GO:0022613,GO:0031167,GO:0032259,GO:0034470,GO:0034641,GO:0034660,GO:0036265,GO:0042254,GO:0043170,GO:0043412,GO:0043414,GO:0044085,GO:0044237,GO:0044238,GO:0044260,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0070043,GO:0070475,GO:0070476,GO:0071704,GO:0071840,GO:0090304,GO:0140098,GO:0140102,GO:1901360 2.1.1.170 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004944 303.0
DYD1_k127_2756826_1 PFAM Glycosyl transferase family 2 - - - 0.000000000000000000000000000000000000000000000000000000000000000001319 230.0
DYD1_k127_2756826_2 Ribosomal protein S23 - - - 0.00000000000000000000000000000000000000005125 154.0
DYD1_k127_2756826_3 COGs COG2197 Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain - - - 0.00000000000000000000000000000000000000008391 153.0
DYD1_k127_2775137_0 bacterial-type flagellum-dependent cell motility - - - 0.00000000000000000000000000000000001583 151.0
DYD1_k127_2775137_2 domain, Protein - - - 0.00000000000002106 78.0
DYD1_k127_2777517_0 COG1228 Imidazolonepropionase and related K01468 - 3.5.2.7 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002017 545.0
DYD1_k127_2777517_1 PFAM sodium hydrogen exchanger - - - 0.00000000000000000000000000000000000000000000000000000000000000000005031 242.0
DYD1_k127_277768_0 PFAM ASPIC and UnbV - - - 1.779e-219 692.0
DYD1_k127_2783066_0 PFAM Aldehyde dehydrogenase K13877 - 1.2.1.26 1.705e-242 756.0
DYD1_k127_2783066_1 Bacterial protein of unknown function (DUF885) - - - 1.744e-222 703.0
DYD1_k127_2783066_2 Belongs to the DapA family K01714,K21062 - 3.5.4.22,4.3.3.7 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005238 452.0
DYD1_k127_2783066_3 GAF domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001022 430.0
DYD1_k127_2783066_4 PFAM Response regulator receiver domain - - - 0.0000000000000000000000000000000006569 131.0
DYD1_k127_2783066_5 PFAM peptidase S8 and S53 subtilisin kexin sedolisin - - - 0.000000000000000000000000000000001692 138.0
DYD1_k127_2783066_6 SWIB/MDM2 domain K03169 - 5.99.1.2 0.000000000000000000000000000000006937 130.0
DYD1_k127_279350_0 Dihydrolipoamide acetyltransferase component of pyruvate dehydrogenase complex K00658 - 2.3.1.61 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004783 495.0
DYD1_k127_279350_1 - - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001058 359.0
DYD1_k127_279350_2 peptidase S9 prolyl oligopeptidase active site domain protein - - - 0.000000000000000000000000000000000000000000000000000000002327 200.0
DYD1_k127_279350_3 Phosphoglycerate mutase family - - - 0.000000000000000000007303 98.0
DYD1_k127_279350_4 Addiction module toxin, RelE StbE family K06218 - - 0.0000000000000000003222 91.0
DYD1_k127_279350_5 Belongs to the CinA family K03742,K03743 - 3.5.1.42 0.000000003735 58.0
DYD1_k127_280195_0 thymidine kinase K00857 GO:0003674,GO:0003824,GO:0004797,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006139,GO:0006213,GO:0006259,GO:0006725,GO:0006753,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009116,GO:0009117,GO:0009120,GO:0009123,GO:0009124,GO:0009157,GO:0009162,GO:0009165,GO:0009987,GO:0016301,GO:0016310,GO:0016740,GO:0016772,GO:0018130,GO:0019136,GO:0019205,GO:0019206,GO:0019438,GO:0019637,GO:0034641,GO:0034654,GO:0043170,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044271,GO:0044281,GO:0044424,GO:0044444,GO:0044464,GO:0046104,GO:0046125,GO:0046483,GO:0055086,GO:0071704,GO:0072527,GO:0090304,GO:0090407,GO:1901135,GO:1901293,GO:1901360,GO:1901362,GO:1901564,GO:1901576,GO:1901657 2.7.1.21 0.00000000000000000000000000000000000000000000000000001551 188.0
DYD1_k127_280195_1 PFAM Cytochrome c-type biogenesis protein CcmB K02194 - - 0.00000000001016 66.0
DYD1_k127_280195_2 - - - - 0.00000000003881 74.0
DYD1_k127_2828880_0 PFAM Tetratricopeptide - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009448 355.0
DYD1_k127_2828880_1 NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be a menaquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient K00330 - 1.6.5.3 0.00000000000000000000000000000000000001201 147.0
DYD1_k127_2828880_2 ABC-type phosphate transport system periplasmic K02040 - - 0.000000001429 59.0
DYD1_k127_2855354_0 Belongs to the ompA family - - - 9.371e-260 814.0
DYD1_k127_2855354_1 DNA protecting protein DprA K04096 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006904 312.0
DYD1_k127_2855354_2 Glycosyl transferase family 2 K12984 - - 0.0000000000000000000000000000000000000000000000000000004456 196.0
DYD1_k127_2855354_3 mRNA binding K07339 - - 0.000000000008874 66.0
DYD1_k127_286523_0 ATPase that binds to both the 70S ribosome and the 50S ribosomal subunit in a nucleotide-independent manner K06942 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000128 529.0
DYD1_k127_286523_1 Rhodanese Homology Domain - - - 0.0000000000000004202 91.0
DYD1_k127_286523_2 rhodanese-related sulfurtransferase - - - 0.0000001476 63.0
DYD1_k127_2873876_0 The pyruvate dehydrogenase complex catalyzes the overall conversion of pyruvate to acetyl-CoA and CO(2) K00627 - 2.3.1.12 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000147 576.0
DYD1_k127_2873876_1 PQQ enzyme repeat - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001306 531.0
DYD1_k127_288117_0 Bacterial membrane protein, YfhO - - - 0.00000000000000000000000000000000008135 147.0
DYD1_k127_288117_1 Enoyl-(Acyl carrier protein) reductase - - - 0.0000000000000000000000000000005019 126.0
DYD1_k127_2882632_0 Calcineurin-like phosphoesterase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008959 380.0
DYD1_k127_2884137_0 NAD dependent epimerase dehydratase family K00091 - 1.1.1.219 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007994 404.0
DYD1_k127_2884137_1 CarboxypepD_reg-like domain - - - 0.0000002819 55.0
DYD1_k127_2897999_0 Glycosyl transferases group 1 - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000004597 291.0
DYD1_k127_2897999_1 2OG-Fe(II) oxygenase superfamily - - - 0.0000000000000000000000001832 107.0
DYD1_k127_291079_0 In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity K02335 - 2.7.7.7 0.0 1356.0
DYD1_k127_291079_1 Fatty acid hydroxylase superfamily - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002178 341.0
DYD1_k127_291079_2 Bacteriocin-protection, YdeI or OmpD-Associated - - - 0.00000000000000000000000000000000000000000000000000000000000000000000003375 246.0
DYD1_k127_291079_3 - - - - 0.00000000005801 67.0
DYD1_k127_291079_4 translation initiation factor activity K06996 - - 0.0000002462 52.0
DYD1_k127_2910990_0 COG0738 Fucose permease K02429 - - 1.93e-280 871.0
DYD1_k127_2910990_1 Synthesizes alpha-1,4-glucan chains using ADP-glucose K00703 - 2.4.1.21 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006082 522.0
DYD1_k127_2910990_2 Glucokinase K00845 - 2.7.1.2 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001315 507.0
DYD1_k127_2910990_3 COGs COG4632 Exopolysaccharide biosynthesis protein related to N-acetylglucosamine-1-phosphodiester alpha-N-acetylglucosaminidase - - - 0.00000000000000000000000000000000000000003144 153.0
DYD1_k127_2923825_0 Histidine kinase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006135 368.0
DYD1_k127_2923825_1 cheY-homologous receiver domain - - - 0.000000000000000000000000000000000000008884 149.0
DYD1_k127_2923825_2 epimerase - - - 0.0000000000000000000000000000000003372 134.0
DYD1_k127_2927507_0 Tetratricopeptide repeat - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000844 454.0
DYD1_k127_2927507_1 Uncharacterized protein conserved in bacteria (DUF2255) - - - 0.000000000000000000000000000000009548 132.0
DYD1_k127_2928064_0 Two component transcriptional regulator, LuxR family - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003146 342.0
DYD1_k127_2928064_1 Two component transcriptional regulator, LuxR family - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003656 310.0
DYD1_k127_2928064_2 Histidine kinase - - - 0.000000000000000000000000000000000000000000000000000005557 195.0
DYD1_k127_2929093_0 Synthesizes selenophosphate from selenide and ATP K01008 - 2.7.9.3 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004765 479.0
DYD1_k127_2929093_1 Rhodanese Homology Domain K06917 - - 0.000000000000000000000000000000000000000000003513 168.0
DYD1_k127_2929093_2 - - - - 0.00000000000000002282 96.0
DYD1_k127_2929732_0 hydrolase, family 3 - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006567 544.0
DYD1_k127_293445_0 Required for chromosome condensation and partitioning K03529 - - 0.0 1154.0
DYD1_k127_2939432_0 metallophosphoesterase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000008912 250.0
DYD1_k127_2939432_1 ankyrin repeats - - - 0.0000000000000000000000000000000000000000000000000000000000001674 223.0
DYD1_k127_2939432_2 PFAM RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) - - - 0.000000000000000000006529 95.0
DYD1_k127_2939432_3 - - - - 0.0000000004737 64.0
DYD1_k127_2939432_4 Type II and III secretion system protein K02507,K02666 - - 0.00003683 53.0
DYD1_k127_2940407_0 Sortilin, neurotensin receptor 3, - - - 4.205e-268 837.0
DYD1_k127_2940407_1 esterase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004913 301.0
DYD1_k127_2940407_2 - - - - 0.0000000000000000000000000000000000000000000000000000000000000004603 226.0
DYD1_k127_2940407_3 BNR Asp-box repeat - - - 0.0000001319 53.0
DYD1_k127_2950729_0 Belongs to the class-II aminoacyl-tRNA synthetase family K04567 - 6.1.1.6 1.508e-262 816.0
DYD1_k127_2950729_1 Enoyl-(Acyl carrier protein) reductase K13775 - - 0.00000000000000000000000000000000000009748 142.0
DYD1_k127_2950729_2 Outer membrane protein beta-barrel domain - - - 0.00004956 48.0
DYD1_k127_2962240_0 Tetratricopeptide repeat - - - 9.737e-197 619.0
DYD1_k127_2962240_1 Tetratricopeptide repeat - - - 0.000000000000000000004312 93.0
DYD1_k127_2973700_0 OPT oligopeptide transporter protein - - - 2.962e-317 983.0
DYD1_k127_2973700_1 Protein of unknown function (DUF1501) - - - 2.87e-211 662.0
DYD1_k127_2973700_2 phospholipase C - - - 0.0000000000000000000000000000000000000000008859 178.0
DYD1_k127_2973700_3 regulation of ryanodine-sensitive calcium-release channel activity - - - 0.0000000000000000000000000000000000000000008916 165.0
DYD1_k127_2973700_4 Large extracellular alpha-helical protein - - - 0.000000000000001217 91.0
DYD1_k127_2976763_0 ABC-type transport system involved in lipoprotein release permease component K09808 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001101 461.0
DYD1_k127_2976763_1 SET domain K07117 - - 0.000000000000000000000000000000000000000306 153.0
DYD1_k127_2977117_0 - - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001131 595.0
DYD1_k127_2977117_1 PFAM Activator of Hsp90 ATPase - - - 0.00000000000000000000000000000000000000006206 153.0
DYD1_k127_2977117_2 methylamine metabolic process K15977 - - 0.000000000000000000000000000000002189 133.0
DYD1_k127_2977117_3 Catalyzes the reversible hydrolysis of the amide bond within dihydroorotate. This metabolic intermediate is required for the biosynthesis of pyrimidine nucleotides K01465 - 3.5.2.3 0.0000000000000000000000000000002421 124.0
DYD1_k127_2989188_0 PFAM Aminotransferase class I and II K00639 - 2.3.1.29 1.947e-237 739.0
DYD1_k127_2989188_1 DinB family - - - 0.0000000000000000000000000000000000000000000008631 170.0
DYD1_k127_2989188_2 Peptidase dimerisation domain K01295 - 3.4.17.11 0.00000000004487 65.0
DYD1_k127_2989188_3 Dipeptidyl peptidase IV (DPP IV) N-terminal region K01278 - 3.4.14.5 0.00005166 50.0
DYD1_k127_2989495_0 NADH dehydrogenase K03885 - 1.6.99.3 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000001737 298.0
DYD1_k127_2989495_1 - - - - 0.0000000000000000000000000000000000000000000000000006733 188.0
DYD1_k127_2989495_2 Inhibitor of apoptosis-promoting Bax1 K06890 - - 0.00000000000000000000000000000000000000001038 155.0
DYD1_k127_2990675_0 Peptidase family M1 domain - - - 0.0 1121.0
DYD1_k127_2990675_1 Putative esterase - - - 0.000000000000003135 78.0
DYD1_k127_299649_0 Involved in the restart of stalled replication forks. Recognizes and binds the arrested nascent DNA chain at stalled replication forks. It can open the DNA duplex, via its helicase activity, and promote assembly of the primosome and loading of the major replicative helicase DnaB onto DNA K04066 - - 3.732e-288 895.0
DYD1_k127_299649_1 epimerase - - - 0.0000000000000000000000000000000000000000000000000000000000000004184 224.0
DYD1_k127_299649_2 FMN reductase - - - 0.0000000000000000000000000000000000000000003435 163.0
DYD1_k127_299649_3 translation elongation factor activity K02358 - - 0.000000000000000000002863 96.0
DYD1_k127_299649_4 Involved in the restart of stalled replication forks. Recognizes and binds the arrested nascent DNA chain at stalled replication forks. It can open the DNA duplex, via its helicase activity, and promote assembly of the primosome and loading of the major replicative helicase DnaB onto DNA K04066 - - 0.0000000001534 61.0
DYD1_k127_3003044_0 PFAM Coenzyme A transferase K01027,K01028,K01031,K01034 - 2.8.3.5,2.8.3.6,2.8.3.8,2.8.3.9 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000247 413.0
DYD1_k127_3003044_1 Domain of unknown function (DUF4835) - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003172 392.0
DYD1_k127_3003044_2 PFAM Coenzyme A transferase K01029,K01032 - 2.8.3.5,2.8.3.6 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000002898 281.0
DYD1_k127_3003044_3 Catalyzes two steps in the biosynthesis of coenzyme A. In the first step cysteine is conjugated to 4'-phosphopantothenate to form 4-phosphopantothenoylcysteine, in the latter compound is decarboxylated to form 4'-phosphopantotheine K13038 - 4.1.1.36,6.3.2.5 0.000000000000000000000000000000000000000000000000002737 186.0
DYD1_k127_3003044_4 Domain of unknown function (DUF4296) - - - 0.0000000000008714 73.0
DYD1_k127_3016899_0 Histidine kinase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002641 477.0
DYD1_k127_3016899_1 PAP2 superfamily - - - 0.000000000000000000000000000000000000001315 150.0
DYD1_k127_3037559_0 polysaccharide biosynthetic process - - - 0.000000000000000000000000000000000000000000338 167.0
DYD1_k127_3037559_1 Glycosyltransferase family 10 (fucosyltransferase) C-term - - - 0.000000000000000000000000000000000003625 148.0
DYD1_k127_3043436_0 Bifunctional enzyme that catalyzes the epimerization of the S- and R-forms of NAD(P)HX and the dehydration of the S-form of NAD(P)HX at the expense of ADP, which is converted to AMP. This allows the repair of both epimers of NAD(P)HX, a damaged form of NAD(P)H that is a result of enzymatic or heat-dependent hydration K17758,K17759 - 4.2.1.136,5.1.99.6 0.00000000000000000000000000000000000000000000000000000000000000000000001979 248.0
DYD1_k127_3043436_1 beta-lactamase - - - 0.0000000000000000000000000000000000000000000000000001295 191.0
DYD1_k127_3049866_0 unfolded protein binding - - - 8.813e-216 674.0
DYD1_k127_3049866_1 Rieske [2Fe-2S] domain - - - 0.0000000000000000000000000000002819 123.0
DYD1_k127_3049866_2 PFAM Cupin 2, conserved barrel - - - 0.00000000000000000000000000004942 117.0
DYD1_k127_3052235_0 Peptidase S46 - GO:0003674,GO:0003824,GO:0004177,GO:0005488,GO:0005575,GO:0005576,GO:0005623,GO:0006508,GO:0006518,GO:0006807,GO:0008150,GO:0008152,GO:0008233,GO:0008236,GO:0008238,GO:0008239,GO:0009056,GO:0009279,GO:0009986,GO:0009987,GO:0016020,GO:0016049,GO:0016787,GO:0017171,GO:0019538,GO:0019867,GO:0030154,GO:0030312,GO:0030313,GO:0031975,GO:0032502,GO:0033218,GO:0034641,GO:0040007,GO:0042277,GO:0043170,GO:0043171,GO:0043603,GO:0044237,GO:0044238,GO:0044248,GO:0044462,GO:0044464,GO:0048468,GO:0048588,GO:0048589,GO:0048856,GO:0048869,GO:0070011,GO:0071704,GO:0071944,GO:0140096,GO:1901564,GO:1901565,GO:1901575 - 4e-290 900.0
DYD1_k127_3052235_1 An essential GTPase which binds GTP, GDP and possibly (p)ppGpp with moderate affinity, with high nucleotide exchange rates and a fairly low GTP hydrolysis rate. Plays a role in control of the cell cycle, stress response, ribosome biogenesis and in those bacteria that undergo differentiation, in morphogenesis control K03979 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006024 567.0
DYD1_k127_3052235_2 carbonic anhydrase K02617,K08279 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000002438 291.0
DYD1_k127_3052235_3 - - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000003956 279.0
DYD1_k127_3052235_4 phenylacetic acid degradation protein K02614 - - 0.00000000000000000000000000000000000000000000000000000000671 201.0
DYD1_k127_3052235_5 Enoyl-CoA hydratase/isomerase K15866 - 5.3.3.18 0.000000000000000000000000000000000000000000000000000006085 193.0
DYD1_k127_3052235_6 - - - - 0.0000000000000000000000000001376 120.0
DYD1_k127_3083151_0 Outer membrane protein beta-barrel domain - - - 0.00000000000000000000000000000000000000000000000000000000000000353 228.0
DYD1_k127_3083151_1 Outer membrane protein beta-barrel domain - - - 0.0000000000000000000000000000000000000000000000000000000008175 212.0
DYD1_k127_3083151_2 Belongs to the UbiD family K03182 - 4.1.1.98 0.0000000000000000000000000000000000000000000000000000000158 198.0
DYD1_k127_3108706_0 Catalyzes the methyl esterification of L-isoaspartyl residues in peptides and proteins that result from spontaneous decomposition of normal L-aspartyl and L-asparaginyl residues. It plays a role in the repair and or degradation of damaged proteins - - - 0.0000000000000000000000000000000000000000000000000000007271 198.0
DYD1_k127_3108706_1 Methyltransferase FkbM domain - - - 0.0000000000000000000000000000000000000002499 158.0
DYD1_k127_3108706_2 Catalyzes the conversion of GDP-D-mannose to GDP-4- dehydro-6-deoxy-D-mannose K01711 - 4.2.1.47 0.000000000000000000000000000000000002845 137.0
DYD1_k127_3108706_3 domain, Protein - - - 0.0000000000000000000002441 101.0
DYD1_k127_3108706_4 - - - - 0.00000003037 61.0
DYD1_k127_3110041_0 TIGRFAM Raf kinase inhibitor-like protein, YbhB YbcL family K06910 - - 0.00000000000000000000000000000000000000000000000000000001586 201.0
DYD1_k127_3110041_1 Acetyltransferase (GNAT) domain - - - 0.000000002291 59.0
DYD1_k127_3118916_0 homogentisate 12-dioxygenase K00451 - 1.13.11.5 2.19e-236 732.0
DYD1_k127_3123144_0 Belongs to the Glu Leu Phe Val dehydrogenases family K00262 GO:0003674,GO:0003824,GO:0004353,GO:0004354,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006082,GO:0006520,GO:0006536,GO:0006537,GO:0006807,GO:0008150,GO:0008152,GO:0008652,GO:0009058,GO:0009064,GO:0009084,GO:0009986,GO:0009987,GO:0016053,GO:0016491,GO:0016638,GO:0016639,GO:0019752,GO:0043436,GO:0043648,GO:0043650,GO:0044237,GO:0044238,GO:0044249,GO:0044281,GO:0044283,GO:0044424,GO:0044444,GO:0044464,GO:0046394,GO:0055114,GO:0071704,GO:1901564,GO:1901566,GO:1901576,GO:1901605,GO:1901607 1.4.1.4 3.001e-205 647.0
DYD1_k127_3123144_1 Belongs to the glycosyl hydrolase 18 family K01183 - 3.2.1.14 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003095 407.0
DYD1_k127_3123144_2 Domain of unknown function (DUF4407) - - - 0.00000000000000000000000000000000000000000000000000000000000006269 216.0
DYD1_k127_3123144_3 - - - - 0.00000000000000000000000000003904 123.0
DYD1_k127_3123144_4 - - - - 0.00000000000000000001591 96.0
DYD1_k127_3130325_0 PAP2 superfamily - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001829 479.0
DYD1_k127_3130325_1 Pfam Glycosyl hydrolase family 20, catalytic domain K12373 - 3.2.1.52 0.0000000000000000000000000000007814 129.0
DYD1_k127_3130325_2 ASPIC UnbV domain protein - - - 0.00000000000000000000001347 104.0
DYD1_k127_3131423_0 Winged helix DNA-binding domain - - - 0.00000000000000000000000000000000000000000001134 163.0
DYD1_k127_3131423_2 Protein conserved in bacteria - - - 0.0000000000001257 83.0
DYD1_k127_313532_0 Necessary for normal cell division and for the maintenance of normal septation K03978 GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0044424,GO:0044444,GO:0044464 - 0.0000000000000000000000000000000000000000000000000000000000000000000000003458 252.0
DYD1_k127_313532_1 Methyltransferase required for the conversion of demethylmenaquinol (DMKH2) to menaquinol (MKH2) K03183 - 2.1.1.163,2.1.1.201 0.000000000000000000000000000000000000000000007075 166.0
DYD1_k127_3142671_0 TPR repeat - - - 0.0000009375 62.0
DYD1_k127_3142671_1 TPR repeat Sel1-like repeat Tetratricopeptide TPR_3 Tetratricopeptide TPR_2 - - - 0.000002156 61.0
DYD1_k127_3144752_0 TonB-dependent receptor - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001473 565.0
DYD1_k127_3144752_1 Metallophosphoesterase - - - 0.00000000000000000000000000000000000000000000000000000000000000003481 224.0
DYD1_k127_3146518_0 PFAM HhH-GPD superfamily base excision DNA repair protein K10773 - 4.2.99.18 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002014 325.0
DYD1_k127_3146518_1 Las17-binding protein actin regulator - - - 0.000000000000000000000000000000000000000000000000000000000000000003734 229.0
DYD1_k127_3146518_2 Ribose 5-phosphate isomerase K01808 - 5.3.1.6 0.0000000000000000000000000000000000000000000000000000000000004977 213.0
DYD1_k127_3146518_3 translation initiation factor activity K06996 - - 0.0000000000000000000004288 96.0
DYD1_k127_3146518_4 Domain of unknown function (DUF4383) - - - 0.000000000000000004838 89.0
DYD1_k127_3146518_5 COG3209 Rhs family protein - - - 0.00000000000000002448 89.0
DYD1_k127_3149769_0 Histidine kinase K07778 - 2.7.13.3 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002557 393.0
DYD1_k127_3149769_1 Catalyzes the specific phosphorylation of the 3-hydroxyl group of shikimic acid using ATP as a cosubstrate K00891 GO:0000287,GO:0003674,GO:0003824,GO:0004765,GO:0005488,GO:0006082,GO:0006520,GO:0006725,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0008652,GO:0009058,GO:0009072,GO:0009073,GO:0009987,GO:0016053,GO:0016301,GO:0016310,GO:0016740,GO:0016772,GO:0016773,GO:0019438,GO:0019632,GO:0019752,GO:0032787,GO:0043167,GO:0043169,GO:0043436,GO:0044237,GO:0044238,GO:0044249,GO:0044281,GO:0044283,GO:0046394,GO:0046872,GO:0071704,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576,GO:1901615 2.7.1.71 0.0000000000000000000000000000000000000000000000000000000003339 207.0
DYD1_k127_3151641_0 peptidase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000354 361.0
DYD1_k127_3155782_0 TonB-dependent receptor - - - 1.947e-227 714.0
DYD1_k127_3155782_1 Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003998 597.0
DYD1_k127_3155782_2 Protein of unknown function (DUF3347) - - - 0.0000000000000000000000000000000000000000000000000000000000002691 218.0
DYD1_k127_3155782_4 - - - - 0.0002009 46.0
DYD1_k127_3156455_1 - - - - 0.00000000000000000000008364 101.0
DYD1_k127_3162562_0 Sigma-54 interaction domain K03405 - 6.6.1.1 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004929 479.0
DYD1_k127_3162562_1 Cell wall formation K00075 - 1.3.1.98 0.000000000000000000000000000007233 119.0
DYD1_k127_3163135_0 The beta subunit is responsible for the synthesis of L- tryptophan from indole and L-serine K01696,K01817 - 4.2.1.20,5.3.1.24 4.109e-206 646.0
DYD1_k127_3163135_1 The alpha subunit is responsible for the aldol cleavage of indoleglycerol phosphate to indole and glyceraldehyde 3- phosphate K01695 - 4.2.1.20 0.00000000000000000000000000000000000000000000000000000001242 199.0
DYD1_k127_3163135_2 Protein of unknown function (DUF559) - - - 0.00000000000000000000000000000003428 130.0
DYD1_k127_3167469_0 ABC-type transport system involved in lipoprotein release permease component K09808,K09815 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003233 433.0
DYD1_k127_3167469_1 One of several proteins that assist in the late maturation steps of the functional core of the 30S ribosomal subunit. Associates with free 30S ribosomal subunits (but not with 30S subunits that are part of 70S ribosomes or polysomes). Required for efficient processing of 16S rRNA. May interact with the 5'-terminal helix region of 16S rRNA K02834 - - 0.000000000000000000000000000000000000000000004295 166.0
DYD1_k127_3167469_2 ABC transporter K06147,K11085 - - 0.000000000000008505 77.0
DYD1_k127_317492_0 Exhibits a very high intrinsic GTPase hydrolysis rate. Involved in the addition of a carboxymethylaminomethyl (cmnm) group at the wobble position (U34) of certain tRNAs, forming tRNA- cmnm(5)s(2)U34 K03650 - - 4.803e-203 641.0
DYD1_k127_317492_1 Interacts with outer membrane receptor proteins that carry out high-affinity binding and energy dependent uptake into the periplasmic space of specific substrates. It could act to transduce energy from the cytoplasmic membrane to specific energy- requiring processes in the outer membrane, resulting in the release into the periplasm of ligands bound by these outer membrane proteins K03832 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000002767 293.0
DYD1_k127_317492_2 PFAM Biopolymer transport protein ExbD TolR - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000004069 260.0
DYD1_k127_317492_3 PFAM MotA TolQ ExbB proton channel K03561 - - 0.00000000000000000000000000000000000000000000000000000000000000000001425 235.0
DYD1_k127_317492_4 PFAM Biopolymer transport protein ExbD TolR - - - 0.0000000000000000000000000000000000000000000000000000000000000004789 226.0
DYD1_k127_317492_5 Tetratricopeptide repeat - - - 0.000000000000000000000000000002596 121.0
DYD1_k127_3182548_0 Neutral zinc metallopeptidase K07054 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001311 335.0
DYD1_k127_3182548_1 Beta-lactamase superfamily domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003121 305.0
DYD1_k127_3195717_0 Digests double-stranded RNA. Involved in the processing of primary rRNA transcript to yield the immediate precursors to the large and small rRNAs (23S and 16S). Processes some mRNAs, and tRNAs when they are encoded in the rRNA operon. Processes pre- crRNA and tracrRNA of type II CRISPR loci if present in the organism K03685 - 3.1.26.3 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005944 362.0
DYD1_k127_3195717_1 Catalyzes the condensation reaction of fatty acid synthesis by the addition to an acyl acceptor of two carbons from malonyl-ACP K09458 - 2.3.1.179 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000006051 294.0
DYD1_k127_3195717_2 PFAM Glyoxalase bleomycin resistance protein dioxygenase K05606 - 5.1.99.1 0.0000000000000000000000000000000000000000000000000000002947 196.0
DYD1_k127_3200391_0 PFAM aromatic amino acid beta-eliminating lyase threonine aldolase K01667 - 4.1.99.1 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003293 315.0
DYD1_k127_3200391_1 Beta-eliminating lyase K01667 - 4.1.99.1 0.000000000000000000000000000000000000000000000000000000000000000000000000000445 258.0
DYD1_k127_320289_0 Pyrrolo-quinoline quinone - - - 4.484e-258 810.0
DYD1_k127_320289_1 Domain of unknown function (DU1801) - - - 0.0000000000000000000000000000000000000000000000000000000000000007863 221.0
DYD1_k127_320289_2 - - - - 0.000002134 56.0
DYD1_k127_3209582_0 Dioxygenase K00449 - 1.13.11.3 0.00000000000000000000000000000000000000000000000000000000000000000000007521 246.0
DYD1_k127_3209582_1 Domain of unknown function (DUF4136) - - - 0.00000000000000000000000000000000000000000000000000000000000000000002276 237.0
DYD1_k127_3209582_2 Destroys radicals which are normally produced within the cells and which are toxic to biological systems K04565 - 1.15.1.1 0.0000000000000000000000000000000000000000000000000000000001798 209.0
DYD1_k127_3209582_3 Signal transduction histidine kinase, LytS - - - 0.0000000000000000000000000000000000000000000000000000000004706 214.0
DYD1_k127_3209582_4 LytTr DNA-binding domain - - - 0.00000000000000000000003739 100.0
DYD1_k127_3209582_5 gluconolactonase activity K14274 - - 0.00000615 57.0
DYD1_k127_3212651_0 TonB-dependent receptor K02014,K16087 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001888 456.0
DYD1_k127_3212651_1 Dehydrogenase K00102,K00104 - 1.1.2.4,1.1.3.15 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002683 422.0
DYD1_k127_3212651_2 C-terminal domain of CHU protein family - - - 0.0000000000000000000000000000000000000000000000002862 178.0
DYD1_k127_3214282_0 Glycosyltransferase family 9 (heptosyltransferase) - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004495 527.0
DYD1_k127_3214282_1 Dolichyl-phosphate-mannose-protein mannosyltransferase K07264 - 2.4.2.43 0.00006289 46.0
DYD1_k127_3222823_0 Rhomboid family - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000001797 276.0
DYD1_k127_3222823_1 Specifically methylates the pseudouridine at position 1915 (m3Psi1915) in 23S rRNA K00783 - 2.1.1.177 0.0000000000000000000000000000000000000000000000000000000000000000009231 231.0
DYD1_k127_3222823_2 Ligates lysine onto the cytidine present at position 34 of the AUA codon-specific tRNA(Ile) that contains the anticodon CAU, in an ATP-dependent manner. Cytidine is converted to lysidine, thus changing the amino acid specificity of the tRNA from methionine to isoleucine K04075 - 6.3.4.19 0.00000000000000000000000000000000000000000000000003489 182.0
DYD1_k127_3223095_0 Isocitrate isopropylmalate dehydrogenase K00031,K00052 - 1.1.1.42,1.1.1.85 6.897e-266 824.0
DYD1_k127_3223095_1 Catalyzes the interconversion of 2-phosphoglycerate and 3-phosphoglycerate K15633 - 5.4.2.12 2.582e-200 635.0
DYD1_k127_3223095_2 Belongs to the NadC ModD family K00767 - 2.4.2.19 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009327 417.0
DYD1_k127_3223095_3 Outer membrane protein beta-barrel family K16087 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001171 361.0
DYD1_k127_3223095_4 protein affecting Mg2 Co2 transport K06195 - - 0.000000000000000000000000000000000000000000000000000000000000001215 220.0
DYD1_k127_3223095_5 Haem-binding domain - - - 0.000000000000000000000000000000000000000000000000000001309 196.0
DYD1_k127_3223095_6 Translation initiation factor SUI1 K03113 - - 0.0000000000000000000000000000000000000000000000001522 179.0
DYD1_k127_3223095_7 Domain of unknown function (DUF4783) - - - 0.000000000000000000000000000000000007625 139.0
DYD1_k127_3223095_8 Divergent 4Fe-4S mono-cluster - - - 0.0000000000000000000000000000009113 122.0
DYD1_k127_3225088_0 exonuclease of the beta-lactamase fold involved in RNA processing K07576 - - 1.683e-231 723.0
DYD1_k127_3225088_1 Specifically catalyzes the decarboxylation of meso- diaminopimelate (meso-DAP) to L-lysine K01586 - 4.1.1.20 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002367 556.0
DYD1_k127_3225088_2 Putative S-adenosyl-L-methionine-dependent methyltransferase - - - 0.0000000000000000000000000000000000000000000000000000000000000000002367 235.0
DYD1_k127_3225088_3 Domain of unknown function (DUF4442) - - - 0.00000000000000000000000000000000000000000000000000000000001312 211.0
DYD1_k127_3225088_4 Protein of unknown function, DUF255 - - - 0.00000000000000000000000000000000000000000000000000000003111 200.0
DYD1_k127_3225088_5 Domain of unknown function (DUF4136) - - - 0.00000000000000000000000000000000000000000000004265 180.0
DYD1_k127_3225088_7 Protein of unknown function (DUF4242) - - - 0.0001815 45.0
DYD1_k127_3225523_0 PFAM fumarylacetoacetate (FAA) hydrolase K16171 - 3.7.1.2 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000694 537.0
DYD1_k127_3225523_1 polysaccharide deacetylase K01179 - 3.2.1.4 0.00000000000000000000002081 99.0
DYD1_k127_3225523_2 polysaccharide deacetylase K01179 - 3.2.1.4 0.000000000000000000000275 98.0
DYD1_k127_3227239_0 von Willebrand factor, type A K07114 - - 9.504e-241 755.0
DYD1_k127_3227239_1 NAD-dependent lysine deacetylase and desuccinylase that specifically removes acetyl and succinyl groups on target proteins. Modulates the activities of several proteins which are inactive in their acylated form K12410 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009542 353.0
DYD1_k127_3227239_2 Saccharopine dehydrogenase K00290,K00293 - 1.5.1.10,1.5.1.7 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000005012 294.0
DYD1_k127_3229863_0 polysaccharide deacetylase K01179 - 3.2.1.4 1.448e-245 767.0
DYD1_k127_3231972_0 Belongs to the UDP-glucose GDP-mannose dehydrogenase family K02474,K13015 - 1.1.1.136 2.15e-209 657.0
DYD1_k127_3231972_1 NAD dependent epimerase dehydratase family K01710 - 4.2.1.46 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000755 599.0
DYD1_k127_3231972_2 Belongs to the UDP-glucose GDP-mannose dehydrogenase family K00012 - 1.1.1.22 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001361 487.0
DYD1_k127_3231972_3 Catalyzes the epimerization of the C3' and C5'positions of dTDP-6-deoxy-D-xylo-4-hexulose, forming dTDP-6-deoxy-L-lyxo-4- hexulose K01790 - 5.1.3.13 0.0000000000000000000000000000000000000000000000000000000000000000000000000000004796 267.0
DYD1_k127_3232655_0 Alanine dehydrogenase/PNT, N-terminal domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002389 581.0
DYD1_k127_3242199_0 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain K00058 - 1.1.1.399,1.1.1.95 7.775e-207 649.0
DYD1_k127_3242199_1 NADH dehydrogenase K03885 - 1.6.99.3 0.000000000000000000000000000000000000000000000000000000000000000000000000000000004436 274.0
DYD1_k127_3242199_2 beta-lactamase - - - 0.000000000000000000000000000000000002749 143.0
DYD1_k127_3244854_0 Belongs to the ParB family K03497 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000217 445.0
DYD1_k127_3244854_1 - - - - 0.0000000000000000000000000000002291 128.0
DYD1_k127_3249453_0 Catalyzes the transfer of a dimethylallyl group onto the adenine at position 37 in tRNAs that read codons beginning with uridine, leading to the formation of N6-(dimethylallyl)adenosine (i(6)A) K00791 GO:0003674,GO:0003824,GO:0006139,GO:0006396,GO:0006399,GO:0006400,GO:0006725,GO:0006807,GO:0008033,GO:0008150,GO:0008152,GO:0009451,GO:0009987,GO:0010467,GO:0016070,GO:0016740,GO:0016765,GO:0034470,GO:0034641,GO:0034660,GO:0043170,GO:0043412,GO:0044237,GO:0044238,GO:0046483,GO:0052381,GO:0071704,GO:0090304,GO:0140098,GO:0140101,GO:1901360 2.5.1.75 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001731 347.0
DYD1_k127_3249453_1 Glycosyltransferase Family 4 - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004261 317.0
DYD1_k127_3249453_2 Plasmid pRiA4b ORF-3-like protein - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000002974 277.0
DYD1_k127_3249453_3 tRNA nucleotidyltransferase poly(A) polymerase K00970,K00974 - 2.7.7.19,2.7.7.72 0.000000007043 57.0
DYD1_k127_3253219_0 SnoaL-like polyketide cyclase - - - 0.0000000000000000000000000006561 117.0
DYD1_k127_3256029_0 Acts as a processive, ATP-dependent zinc metallopeptidase for both cytoplasmic and membrane proteins. Plays a role in the quality control of integral membrane proteins K03798 - - 1.24e-322 1000.0
DYD1_k127_3256029_1 Catalyzes the attachment of alanine to tRNA(Ala) in a two-step reaction alanine is first activated by ATP to form Ala- AMP and then transferred to the acceptor end of tRNA(Ala). Also edits incorrectly charged Ser-tRNA(Ala) and Gly-tRNA(Ala) via its editing domain K01872 GO:0003674,GO:0003824,GO:0004812,GO:0004813,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006082,GO:0006139,GO:0006396,GO:0006399,GO:0006400,GO:0006412,GO:0006418,GO:0006419,GO:0006518,GO:0006520,GO:0006725,GO:0006807,GO:0008033,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009451,GO:0009987,GO:0010467,GO:0016070,GO:0016597,GO:0016874,GO:0016875,GO:0019538,GO:0019752,GO:0031406,GO:0034470,GO:0034641,GO:0034645,GO:0034660,GO:0036094,GO:0043038,GO:0043039,GO:0043043,GO:0043167,GO:0043168,GO:0043170,GO:0043177,GO:0043412,GO:0043436,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044281,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0071704,GO:0090304,GO:0140098,GO:0140101,GO:1901360,GO:1901564,GO:1901566,GO:1901576 6.1.1.7 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007731 414.0
DYD1_k127_3256029_10 cell redox homeostasis K03671 - - 0.00000000000000000000000000000000000006462 148.0
DYD1_k127_3256029_11 PFAM Uncharacterised protein family UPF0150 - - - 0.00000000000000000000003152 100.0
DYD1_k127_3256029_12 HicA toxin of bacterial toxin-antitoxin, - - - 0.00000000000000003386 83.0
DYD1_k127_3256029_13 Part of the ABC transporter complex PhnCDE involved in phosphonates import. Responsible for energy coupling to the transport system K02041 - 3.6.3.28 0.00000000000005077 73.0
DYD1_k127_3256029_14 Has lipid A 3-O-deacylase activity. Hydrolyzes the ester bond at the 3 position of lipid A, a bioactive component of lipopolysaccharide (LPS), thereby releasing the primary fatty acyl moiety - - - 0.0008483 42.0
DYD1_k127_3256029_2 Calcineurin-like phosphoesterase K03269 - 3.6.1.54 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001443 411.0
DYD1_k127_3256029_3 PFAM Peptidase family M23 - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005701 413.0
DYD1_k127_3256029_4 PFAM Uncharacterised ACR, YkgG family COG1556 K00782 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000001157 282.0
DYD1_k127_3256029_5 PFAM Biotin lipoate A B protein ligase K03524 - 6.3.4.15 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000002155 280.0
DYD1_k127_3256029_6 - - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000004705 260.0
DYD1_k127_3256029_7 Transcriptional regulator - - - 0.0000000000000000000000000000000000000000000000000000006028 198.0
DYD1_k127_3256029_8 Functions as a ribosomal silencing factor. Interacts with ribosomal protein L14 (rplN), blocking formation of intersubunit bridge B8. Prevents association of the 30S and 50S ribosomal subunits and the formation of functional ribosomes, thus repressing translation K09710 - - 0.000000000000000000000000000000000000000000000000003494 185.0
DYD1_k127_3256029_9 Gamma-glutamyl cyclotransferase, AIG2-like - - - 0.000000000000000000000000000000000000004844 149.0
DYD1_k127_3260802_0 Protein of unknown function - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001261 338.0
DYD1_k127_3260802_1 Domain of unknown function (DUF4260) - - - 0.00000000000000000000000000000001196 130.0
DYD1_k127_3260802_2 Protein of unknown function - - - 0.00000000004302 63.0
DYD1_k127_3261182_0 Catalyzes the cleavage of 2-amino-3-ketobutyrate to glycine and acetyl-CoA K00639 - 2.3.1.29 4.497e-222 692.0
DYD1_k127_3261182_1 - - - - 0.00000000000000002221 89.0
DYD1_k127_326715_0 Voltage gated chloride channel K03281 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008021 576.0
DYD1_k127_326715_1 Involved in the tonB-independent uptake of proteins - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000004432 292.0
DYD1_k127_3272730_0 DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates K03046 GO:0000428,GO:0005575,GO:0005622,GO:0005623,GO:0030880,GO:0032991,GO:0044424,GO:0044464,GO:0061695,GO:1902494,GO:1990234 2.7.7.6 0.0 2551.0
DYD1_k127_3272730_1 DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates K03043 GO:0000428,GO:0005575,GO:0005622,GO:0005623,GO:0030880,GO:0032991,GO:0044424,GO:0044464,GO:0061695,GO:1902494,GO:1990234 2.7.7.6 0.0 1175.0
DYD1_k127_3272730_2 Outer membrane chaperone Skp K06142 - - 0.00000000000000000000000000000000000005393 151.0
DYD1_k127_3272821_0 Belongs to the UbiD family K03182 - 4.1.1.98 8.056e-207 651.0
DYD1_k127_3272821_1 ATP-grasp in the biosynthetic pathway with Ter operon - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000005957 291.0
DYD1_k127_3272821_2 TraB family K09973 - - 0.000000000000000000000000000000000000000000000000000000000000000000000006196 256.0
DYD1_k127_3272821_3 - - - - 0.00000000000000000007047 94.0
DYD1_k127_3312712_0 Catalyzes the ATP-dependent phosphorylation of thiamine- monophosphate (TMP) to form thiamine-pyrophosphate (TPP), the active form of vitamin B1 K00946 - 2.7.4.16 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001282 533.0
DYD1_k127_3312712_1 Peptidase family S41 - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006899 474.0
DYD1_k127_3313500_0 Protein of unknown function (DUF1800) - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003408 441.0
DYD1_k127_3319578_0 DNA segregation ATPase FtsK SpoIIIE and related K03466 - - 2.014e-258 822.0
DYD1_k127_3319578_1 outer membrane lipoprotein carrier protein LolA K03634 - - 0.00000000000000000000000000000001177 132.0
DYD1_k127_3320476_0 DNA mismatch repair protein MutT K07098 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003579 462.0
DYD1_k127_3328555_0 COG2204 Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001524 574.0
DYD1_k127_3328555_1 COG0022 Pyruvate 2-oxoglutarate dehydrogenase complex, dehydrogenase (E1) component, eukaryotic type, beta subunit K00162 - 1.2.4.1 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001925 430.0
DYD1_k127_3340355_0 methionyl-tRNA aminoacylation K01874,K01890,K06878 GO:0003674,GO:0003824,GO:0004812,GO:0004825,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006082,GO:0006139,GO:0006399,GO:0006412,GO:0006418,GO:0006431,GO:0006518,GO:0006520,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0008270,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0016070,GO:0016874,GO:0016875,GO:0019538,GO:0019752,GO:0034641,GO:0034645,GO:0034660,GO:0043038,GO:0043039,GO:0043043,GO:0043167,GO:0043169,GO:0043170,GO:0043436,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044281,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0046872,GO:0046914,GO:0071704,GO:0090304,GO:0140098,GO:0140101,GO:1901360,GO:1901564,GO:1901566,GO:1901576 6.1.1.10,6.1.1.20 3.035e-196 614.0
DYD1_k127_3343973_0 ATP-dependent carboxylate-amine ligase which exhibits weak glutamate--cysteine ligase activity K06048 - - 1.144e-211 661.0
DYD1_k127_3343973_1 Glutathione synthase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005303 557.0
DYD1_k127_3343973_2 Phage integrase, N-terminal SAM-like domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001677 437.0
DYD1_k127_3343973_3 Carboxypeptidase regulatory-like domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001863 354.0
DYD1_k127_3343973_4 Putative esterase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008258 309.0
DYD1_k127_3343973_5 Putative restriction endonuclease - - - 0.000000000000000000000000000000000000000000000000000000000000003908 223.0
DYD1_k127_3348546_0 Belongs to the metallo-dependent hydrolases superfamily. NagA family K01443 - 3.5.1.25 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001229 447.0
DYD1_k127_3348546_1 PAP2 superfamily - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002248 389.0
DYD1_k127_3348546_2 ASPIC and UnbV - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009212 320.0
DYD1_k127_3348546_3 Lipid A 3-O-deacylase (PagL) - - - 0.00000000000000000000000000000000000000000000000003999 188.0
DYD1_k127_3350130_0 DNA polymerase III alpha subunit K02337 - 2.7.7.7 3.438e-301 932.0
DYD1_k127_3350130_1 Belongs to the thioredoxin family K03671 - - 0.000000000000000000000000000000000000000000000000000000001209 201.0
DYD1_k127_3350130_2 Nucleoside K03289,K11537 - - 0.0000000000000000000000000000000001032 134.0
DYD1_k127_335288_0 Dehydrogenase K00074 - 1.1.1.157 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008116 367.0
DYD1_k127_335288_1 electron transfer activity K02660 - - 0.000000000000000000000000000000000000000000000000005055 192.0
DYD1_k127_3355106_0 Involved in the gluconeogenesis. Catalyzes stereospecifically the conversion of dihydroxyacetone phosphate (DHAP) to D-glyceraldehyde-3-phosphate (G3P) K01803 GO:0003674,GO:0003824,GO:0004807,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005975,GO:0005996,GO:0006006,GO:0006066,GO:0006071,GO:0006081,GO:0006082,GO:0006090,GO:0006091,GO:0006094,GO:0006096,GO:0006139,GO:0006163,GO:0006164,GO:0006165,GO:0006725,GO:0006732,GO:0006733,GO:0006753,GO:0006754,GO:0006757,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0009056,GO:0009058,GO:0009108,GO:0009117,GO:0009123,GO:0009124,GO:0009126,GO:0009127,GO:0009132,GO:0009135,GO:0009141,GO:0009142,GO:0009144,GO:0009145,GO:0009150,GO:0009152,GO:0009156,GO:0009161,GO:0009165,GO:0009166,GO:0009167,GO:0009168,GO:0009179,GO:0009185,GO:0009199,GO:0009201,GO:0009205,GO:0009206,GO:0009259,GO:0009260,GO:0009987,GO:0016051,GO:0016052,GO:0016053,GO:0016310,GO:0016853,GO:0016860,GO:0016861,GO:0017144,GO:0018130,GO:0019318,GO:0019319,GO:0019359,GO:0019362,GO:0019363,GO:0019400,GO:0019405,GO:0019438,GO:0019439,GO:0019563,GO:0019637,GO:0019682,GO:0019693,GO:0019751,GO:0019752,GO:0032787,GO:0034404,GO:0034641,GO:0034654,GO:0034655,GO:0042866,GO:0043436,GO:0044237,GO:0044238,GO:0044248,GO:0044249,GO:0044262,GO:0044270,GO:0044271,GO:0044275,GO:0044281,GO:0044282,GO:0044283,GO:0044424,GO:0044444,GO:0044464,GO:0046031,GO:0046034,GO:0046164,GO:0046166,GO:0046174,GO:0046184,GO:0046364,GO:0046390,GO:0046394,GO:0046434,GO:0046483,GO:0046496,GO:0046700,GO:0046939,GO:0051186,GO:0051188,GO:0055086,GO:0071704,GO:0072330,GO:0072521,GO:0072522,GO:0072524,GO:0072525,GO:0090407,GO:1901135,GO:1901137,GO:1901292,GO:1901293,GO:1901360,GO:1901361,GO:1901362,GO:1901564,GO:1901566,GO:1901575,GO:1901576,GO:1901615,GO:1901616 5.3.1.1 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009755 400.0
DYD1_k127_3355106_1 Sugar nucleotidyl transferase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006221 349.0
DYD1_k127_3355698_0 von Willebrand factor, type A K07114 - - 8.908e-200 639.0
DYD1_k127_3355698_1 ATP binding to DnaK triggers the release of the substrate protein, thus completing the reaction cycle. Several rounds of ATP-dependent interactions between DnaJ, DnaK and GrpE are required for fully efficient folding. Also involved, together with DnaK and GrpE, in the DNA replication of plasmids through activation of initiation proteins K03686 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000161 606.0
DYD1_k127_3355698_2 protein CHP03519, membrane, Bacteroidetes - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007375 400.0
DYD1_k127_3355698_3 water channel activity K02440,K06188 - - 0.00000000000000000000000000000000000000000000000000000000000000000007292 236.0
DYD1_k127_3355698_4 Participates actively in the response to hyperosmotic and heat shock by preventing the aggregation of stress-denatured proteins, in association with DnaK and GrpE. It is the nucleotide exchange factor for DnaK and may function as a thermosensor. Unfolded proteins bind initially to DnaJ K03687 GO:0000166,GO:0000774,GO:0003674,GO:0005488,GO:0005515,GO:0008150,GO:0017076,GO:0030234,GO:0030554,GO:0036094,GO:0050790,GO:0051082,GO:0060589,GO:0060590,GO:0065007,GO:0065009,GO:0097159,GO:0098772,GO:1901265,GO:1901363 - 0.0000000000000000000000000000000000000000000000000000000000000000004481 233.0
DYD1_k127_3355698_5 PFAM PKD domain - - - 0.0000000000000000000000000000000000000000000000000000000000000001775 226.0
DYD1_k127_3355698_6 PFAM alkyl hydroperoxide reductase Thiol specific antioxidant Mal allergen K03564 - 1.11.1.15 0.000000000000000000000000000000000000000000000000000000009631 202.0
DYD1_k127_3355698_7 Belongs to the purine pyrimidine phosphoribosyltransferase family K00760 - 2.4.2.8 0.000000000000000000000000000000002162 129.0
DYD1_k127_3362385_0 Domain of unknown function (DUF4331) - - - 0.0000000000000000000000000000000000000000000000000000000001045 209.0
DYD1_k127_3362385_1 Domain of unknown function (DUF4331) - - - 0.00000000000000000000000000000000000000000002858 164.0
DYD1_k127_3362385_2 Tetratricopeptide repeat - - - 0.0000000000000000000000000000005432 127.0
DYD1_k127_3379837_0 Histidine kinase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005166 431.0
DYD1_k127_3379837_1 Two component transcriptional regulator, LuxR family - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009378 351.0
DYD1_k127_3379837_3 PFAM Coenzyme A transferase K01029,K01032 - 2.8.3.5,2.8.3.6 0.000000000000000000001503 94.0
DYD1_k127_3422137_0 Bacterial regulatory helix-turn-helix proteins, AraC family - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000569 482.0
DYD1_k127_3422137_1 Outer membrane protein beta-barrel domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000005317 244.0
DYD1_k127_3422137_2 Methyltransferase required for the conversion of demethylmenaquinol (DMKH2) to menaquinol (MKH2) K03183 - 2.1.1.163,2.1.1.201 0.000000000000000000000000000000000000000000000003467 175.0
DYD1_k127_3422137_3 - - - - 0.00000000000000000000000000000007476 129.0
DYD1_k127_3422137_4 methyltransferase - - - 0.0000000000000000003501 89.0
DYD1_k127_3422137_5 Dihydrofolate reductase - - - 0.00000000000001152 74.0
DYD1_k127_3424992_0 peptidase, M20 K01295 - 3.4.17.11 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003976 531.0
DYD1_k127_3424992_1 O-methyltransferase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003067 309.0
DYD1_k127_3424992_2 - - - - 0.0000000000000000000000000000000001056 133.0
DYD1_k127_3429288_0 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase - - - 0.00000000000000000000000000000000000000000000000000000000000000000494 243.0
DYD1_k127_3429288_1 PFAM MazG nucleotide pyrophosphohydrolase K02428 - 3.6.1.66 0.0000000000000000000000000000000000000000000000000000000001666 206.0
DYD1_k127_3429427_0 His Kinase A (phosphoacceptor) domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001101 440.0
DYD1_k127_3429427_1 7TMR-DISM extracellular 2 K20971 - - 0.00000005633 63.0
DYD1_k127_3440789_0 Peptidase family C25 - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008231 419.0
DYD1_k127_3440789_1 Bacterial membrane protein YfhO - - - 0.0003445 51.0
DYD1_k127_3443739_0 Mg2 transporter protein, CorA family protein K03284 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007733 479.0
DYD1_k127_3443739_1 phosphorylase K00757 - 2.4.2.3 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001535 452.0
DYD1_k127_3443739_2 Catalyzes the stereoinversion of LL-2,6- diaminoheptanedioate (L,L-DAP) to meso-diaminoheptanedioate (meso- DAP), a precursor of L-lysine and an essential component of the bacterial peptidoglycan K01778 GO:0003674,GO:0003824,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006082,GO:0006520,GO:0006553,GO:0006807,GO:0008150,GO:0008152,GO:0008652,GO:0008837,GO:0009058,GO:0009066,GO:0009067,GO:0009085,GO:0009089,GO:0009987,GO:0016053,GO:0016853,GO:0016854,GO:0016855,GO:0019752,GO:0036361,GO:0043436,GO:0043648,GO:0044237,GO:0044238,GO:0044249,GO:0044281,GO:0044283,GO:0044424,GO:0044444,GO:0044464,GO:0046394,GO:0046451,GO:0047661,GO:0071704,GO:1901564,GO:1901566,GO:1901576,GO:1901605,GO:1901607 5.1.1.7 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001576 392.0
DYD1_k127_3443739_3 Involved in the import of queuosine (Q) precursors, required for Q precursor salvage K09125 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002474 327.0
DYD1_k127_3443739_4 Bacterial membrane protein YfhO - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000001389 291.0
DYD1_k127_3443739_5 pfam nudix - - - 0.000000000000000000000000000000000000000000000000000000000000000000000005 246.0
DYD1_k127_3443739_6 DinB superfamily - - - 0.00000000000000000000000000000576 125.0
DYD1_k127_3451021_0 cAMP biosynthetic process - - - 0.0000000002085 73.0
DYD1_k127_3451021_1 - - - - 0.000002183 55.0
DYD1_k127_3451768_0 Putative porin - - - 2.214e-211 671.0
DYD1_k127_3454325_0 Transketolase K00615 - 2.2.1.1 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002556 475.0
DYD1_k127_3454325_1 Glycosyl transferase, family 4 - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003322 429.0
DYD1_k127_3468134_0 Belongs to the BshC family K22136 - - 0.0000000000000000000000000000004743 126.0
DYD1_k127_3468134_1 Tetratricopeptide repeat - - - 0.00000000000000000000000003817 126.0
DYD1_k127_3468134_2 - - - - 0.0000000008037 64.0
DYD1_k127_3478563_0 Fe-S oxidoreductase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004035 473.0
DYD1_k127_3478563_1 Amino acid permease K03294 - - 0.000000000000000000000000000000000000000000000000000000000000000000000001151 246.0
DYD1_k127_3478563_2 light absorption K06893 - - 0.00000000000000000000000000000000000000474 151.0
DYD1_k127_3480672_0 Catalyzes the transfer of the phosphoribosyl group of 5- phosphorylribose-1-pyrophosphate (PRPP) to anthranilate to yield N-(5'-phosphoribosyl)-anthranilate (PRA) K00766,K13497 GO:0000162,GO:0003674,GO:0003824,GO:0004048,GO:0006082,GO:0006520,GO:0006568,GO:0006576,GO:0006586,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0008652,GO:0009058,GO:0009072,GO:0009073,GO:0009308,GO:0009309,GO:0009987,GO:0016053,GO:0016740,GO:0016757,GO:0016763,GO:0018130,GO:0019438,GO:0019752,GO:0034641,GO:0042401,GO:0042430,GO:0042435,GO:0043436,GO:0044106,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0044283,GO:0046219,GO:0046394,GO:0046483,GO:0071704,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576,GO:1901605,GO:1901607 2.4.2.18,4.1.3.27 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006381 572.0
DYD1_k127_3480672_1 Belongs to the TrpC family K01609 GO:0003674,GO:0003824,GO:0004425,GO:0016829,GO:0016830,GO:0016831 4.1.1.48 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000012 308.0
DYD1_k127_3480672_2 Belongs to the TrpF family K01817 - 5.3.1.24 0.00000000000000000000000000000000000000000000000000001236 194.0
DYD1_k127_3489383_0 Peptidase family M28 - - - 4.324e-208 655.0
DYD1_k127_3489383_1 Psort location Cytoplasmic, score 8.96 - - - 0.000000000000000000000000000000000000000000000000001111 188.0
DYD1_k127_3489383_2 Psort location Cytoplasmic, score 8.96 - - - 0.000000002386 57.0
DYD1_k127_349470_0 Pfam Oxidoreductase family, C-terminal alpha beta domain - - - 5.143e-206 646.0
DYD1_k127_349470_1 Domain of Unknown Function (DUF1080) - - - 1.25e-204 643.0
DYD1_k127_349470_2 Protein of unknown function (DUF418) K07148 - - 0.0000000000003104 71.0
DYD1_k127_3506122_0 COG1009 NADH ubiquinone oxidoreductase subunit 5 (chain L) Multisubunit Na H antiporter MnhA subunit K00341 - 1.6.5.3 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000001558 301.0
DYD1_k127_3506122_1 NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be a menaquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient K00340 - 1.6.5.3 0.000000000000000000000003391 102.0
DYD1_k127_3515849_0 COGs COG1013 Pyruvate ferredoxin oxidoreductase and related 2-oxoacid ferredoxin oxidoreductase beta subunit K00175 - 1.2.7.11,1.2.7.3 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002951 602.0
DYD1_k127_3515849_1 3-carboxymuconate cyclase K07404 - 3.1.1.31 0.000000000000000000000000000000000000000000000000000000000000002938 221.0
DYD1_k127_3515849_2 Membrane - - - 0.00000000000000000000000000003252 132.0
DYD1_k127_3528157_0 Domain of unknown function (DUF1972) - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000399 375.0
DYD1_k127_3543033_0 Glucosamine-6-phosphate K02564 - 3.5.99.6 0.0 1041.0
DYD1_k127_3543033_1 Permease - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002689 372.0
DYD1_k127_3543033_2 RNA polymerase sigma factor - - - 0.000000000000005147 77.0
DYD1_k127_3553957_0 acyl-CoA dehydrogenase - - - 1.249e-215 673.0
DYD1_k127_3553957_1 peptidase S9 prolyl oligopeptidase active site domain protein - GO:0003674,GO:0003824,GO:0004177,GO:0005488,GO:0005515,GO:0005575,GO:0005623,GO:0006508,GO:0006518,GO:0006807,GO:0008150,GO:0008152,GO:0008233,GO:0008238,GO:0008239,GO:0009056,GO:0009987,GO:0016787,GO:0019538,GO:0033218,GO:0034641,GO:0042277,GO:0042597,GO:0042802,GO:0042803,GO:0043170,GO:0043171,GO:0043603,GO:0044237,GO:0044238,GO:0044248,GO:0044464,GO:0046983,GO:0070011,GO:0071704,GO:0140096,GO:1901564,GO:1901565,GO:1901575 - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002832 329.0
DYD1_k127_3553957_2 Pyridoxal 5'-phosphate (PLP)-binding protein, which is involved in PLP homeostasis K06997 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000002341 258.0
DYD1_k127_3553957_3 Heme chaperone required for the biogenesis of c-type cytochromes. Transiently binds heme delivered by CcmC and transfers the heme to apo-cytochromes in a process facilitated by CcmF and CcmH K02197 - - 0.0000000000000000000000000000000000000000000000002656 179.0
DYD1_k127_3553957_4 PFAM Cytochrome c assembly protein K02198 - - 0.0000000004224 61.0
DYD1_k127_3586979_0 Catalyzes the GTP-dependent ribosomal translocation step during translation elongation. During this step, the ribosome changes from the pre-translocational (PRE) to the post- translocational (POST) state as the newly formed A-site-bound peptidyl-tRNA and P-site-bound deacylated tRNA move to the P and E sites, respectively. Catalyzes the coordinated movement of the two tRNA molecules, the mRNA and conformational changes in the ribosome K02355 - - 0.0 1152.0
DYD1_k127_3615061_0 PFAM FGGY family of carbohydrate kinases, N-terminal domain K00854 - 2.7.1.17 6.181e-218 687.0
DYD1_k127_3615061_1 Protein of unknown function (DUF420) K08976 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000299 256.0
DYD1_k127_3615061_2 PFAM 6-O-methylguanine DNA methyltransferase, DNA binding domain K00567,K07443 - 2.1.1.63 0.00000000000000000000000000000000000000000000000000007582 189.0
DYD1_k127_3615061_3 - - - - 0.0000000000000005018 78.0
DYD1_k127_3615061_4 protein SCO1 SenC PrrC involved in biogenesis of respiratory and photosynthetic systems K07152 - - 0.0000000000002995 73.0
DYD1_k127_3637098_0 Domain of unknown function (DUF4954) - - - 2.47e-322 1001.0
DYD1_k127_3637098_1 GTPase that plays an essential role in the late steps of ribosome biogenesis K03977 - - 4.771e-227 709.0
DYD1_k127_3637098_2 Catalyzes the first step in hexosamine metabolism, converting fructose-6P into glucosamine-6P using glutamine as a nitrogen source K00820 GO:0003674,GO:0003824,GO:0004360,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006002,GO:0006040,GO:0006047,GO:0006139,GO:0006464,GO:0006486,GO:0006487,GO:0006725,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0008483,GO:0009058,GO:0009059,GO:0009100,GO:0009101,GO:0009225,GO:0009987,GO:0016740,GO:0016769,GO:0019538,GO:0019637,GO:0034641,GO:0034645,GO:0036211,GO:0043170,GO:0043412,GO:0043413,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044281,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0055086,GO:0070085,GO:0070548,GO:0071704,GO:1901135,GO:1901137,GO:1901360,GO:1901564,GO:1901566,GO:1901576 2.6.1.16 0.0000000000000000000000000000000000000001297 151.0
DYD1_k127_3637098_3 An essential GTPase that binds both GDP and GTP, with rapid nucleotide exchange. Plays a role in 16S rRNA processing and 30S ribosomal subunit biogenesis and possibly also in cell cycle regulation and energy metabolism K03595 - - 0.0000000000000000000000000000002761 123.0
DYD1_k127_365906_0 Metallo-beta-lactamase superfamily - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006469 374.0
DYD1_k127_365906_1 PFAM Major Facilitator Superfamily - - - 0.0000000000000000000004046 95.0
DYD1_k127_3660528_0 Saccharopine dehydrogenase NADP binding domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008454 445.0
DYD1_k127_3660528_1 PFAM coagulation factor 5 8 type K01206 - 3.2.1.51 0.000000000000001168 80.0
DYD1_k127_3660528_2 Putative beta-lactamase-inhibitor-like, PepSY-like - - - 0.000000008267 63.0
DYD1_k127_3671942_0 arylsulfatase activity - - - 0.000000000000000000000000000000000000000000000000000000000007131 226.0
DYD1_k127_3671942_1 Required for accurate and efficient protein synthesis under certain stress conditions. May act as a fidelity factor of the translation reaction, by catalyzing a one-codon backward translocation of tRNAs on improperly translocated ribosomes. Back- translocation proceeds from a post-translocation (POST) complex to a pre-translocation (PRE) complex, thus giving elongation factor G a second chance to translocate the tRNAs correctly. Binds to ribosomes in a GTP-dependent manner K03596 - - 0.000000000000000000000000000008051 118.0
DYD1_k127_3671942_2 PFAM glycosyl transferase family 39 - - - 0.000005797 56.0
DYD1_k127_3671975_0 Prevents misfolding and promotes the refolding and proper assembly of unfolded polypeptides generated under stress conditions K04077 GO:0003674,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006457,GO:0006458,GO:0008150,GO:0009987,GO:0016465,GO:0032991,GO:0044183,GO:0044424,GO:0044444,GO:0044445,GO:0044464,GO:0051082,GO:0061077,GO:0101031,GO:1990220 - 1.049e-267 829.0
DYD1_k127_3682540_0 Outer membrane protein beta-barrel family - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001977 402.0
DYD1_k127_3682540_1 COG1595 DNA-directed RNA polymerase specialized sigma subunit, sigma24 homolog K03088 - - 0.000000000000000000000000000000000000000000000000000000000000000000000003206 248.0
DYD1_k127_3682540_2 Outer membrane protein beta-barrel family - - - 0.000000000000000000000000000000000000000009788 160.0
DYD1_k127_3682540_4 ATP-independent chaperone mediated protein folding - - - 0.000000004388 64.0
DYD1_k127_3685613_0 TIGRFAM methylmalonate-semialdehyde dehydrogenase K00140,K22187 - 1.2.1.18,1.2.1.27 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001641 446.0
DYD1_k127_3685613_1 Catalyzes the 2'-O methylation of guanosine at position 18 in tRNA K00556 - 2.1.1.34 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000006679 297.0
DYD1_k127_3685613_2 COG COG1012 NAD-dependent aldehyde dehydrogenases Energy production and conversion K00140 - 1.2.1.18,1.2.1.27 0.00000000000000000000000000000000000000000000000000000000000000000215 235.0
DYD1_k127_3685613_3 - - - - 0.000000000000000000000000000000000000000000000001239 184.0
DYD1_k127_3685613_4 PFAM AhpC TSA family - - - 0.000000000000000001301 88.0
DYD1_k127_3687267_0 lipolytic protein G-D-S-L family - - - 0.0000000000000000000000000000000000000000000000000000005501 202.0
DYD1_k127_3687267_1 Glucose / Sorbosone dehydrogenase K21430 - - 0.00000000000000000000000000000000000000000000000000003907 188.0
DYD1_k127_3687267_2 CAAX protease self-immunity K07052 - - 0.000000000000000000000000000000000002408 147.0
DYD1_k127_3687804_0 Catalyzes the hydroxylation of L-kynurenine (L-Kyn) to form 3-hydroxy-L-kynurenine (L-3OHKyn). Required for synthesis of quinolinic acid K00486 - 1.14.13.9 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000301 486.0
DYD1_k127_3687804_1 Orotidine 5''-phosphate decarboxylase K01591 GO:0003674,GO:0003824,GO:0004590,GO:0006139,GO:0006206,GO:0006207,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009112,GO:0009987,GO:0016829,GO:0016830,GO:0016831,GO:0018130,GO:0019856,GO:0034641,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0046112,GO:0046483,GO:0055086,GO:0071704,GO:0072527,GO:0072528,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576 4.1.1.23 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003465 400.0
DYD1_k127_3698149_0 Part of a stress-induced multi-chaperone system, it is involved in the recovery of the cell from heat-induced damage, in cooperation with DnaK, DnaJ and GrpE K03695 - - 0.0 1118.0
DYD1_k127_3698149_1 COGs COG1680 Beta-lactamase class C and other penicillin binding protein - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002214 379.0
DYD1_k127_371678_0 PFAM Aminotransferase class I and II K00812,K14260 - 2.6.1.1,2.6.1.2,2.6.1.66 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006217 560.0
DYD1_k127_37390_0 malic enzyme K00027,K00029 - 1.1.1.38,1.1.1.40 5.951e-203 636.0
DYD1_k127_37390_1 amidohydrolase - - - 0.000000000000000000000000000000000000000000000000000000000000000000001594 238.0
DYD1_k127_3765711_0 6-phosphogluconolactonase activity - - - 0.00000000000000000000000000000000000000000000000000000003067 215.0
DYD1_k127_3765711_1 Type IX secretion system membrane protein PorP/SprF - - - 0.0000000000000000000000000000000000000003257 156.0
DYD1_k127_3771099_0 NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient. This subunit may bind ubiquinone K00337 - 1.6.5.3 4.796e-194 609.0
DYD1_k127_3771099_1 NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient K00338 - 1.6.5.3 0.000000000000000000000000000000000000000000000000000000000000000000000000006408 255.0
DYD1_k127_3771099_2 Belongs to the complex I subunit 6 family K00339 - 1.6.5.3 0.00000000000000000000000000000000000000000000000000000000000000001976 228.0
DYD1_k127_3771099_3 NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be a menaquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient K00340 - 1.6.5.3 0.00000000000000000000000000000000000000000000001254 173.0
DYD1_k127_3771099_4 Lysozyme inhibitor LprI - - - 0.00000000000000000000000000000000000006317 146.0
DYD1_k127_3779009_0 Tetratricopeptide repeat - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000001088 319.0
DYD1_k127_3779009_1 Pkd domain containing protein - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000006654 269.0
DYD1_k127_3779009_2 Large extracellular alpha-helical protein - - - 0.000000000000004233 88.0
DYD1_k127_3788753_0 Transglutaminase-like superfamily - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001596 383.0
DYD1_k127_3811305_0 Polysaccharide biosynthesis protein - - - 0.00000000000000000000000000000000000000000000000007052 184.0
DYD1_k127_3811305_1 RF-1 domain K15034 - - 0.00000000000000000000000000000000002291 139.0
DYD1_k127_3830078_0 4-hydroxy-3-methylbut-2-en-1-yl diphosphate reductase activity K00945,K02945,K03527 - 1.17.7.4,2.7.4.25 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006044 566.0
DYD1_k127_3836832_0 lysine biosynthetic process via aminoadipic acid - - - 5.279e-252 784.0
DYD1_k127_3836832_1 Belongs to the DEAD box helicase family K11927 - 3.6.4.13 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000654 441.0
DYD1_k127_3836832_2 - - - - 0.00000000000000000000000000000000000000000000000000000009118 201.0
DYD1_k127_3836832_3 PFAM Cold-shock protein, DNA-binding - - - 0.000000000000000000000000000000000000000000001745 168.0
DYD1_k127_3836832_4 Belongs to the UPF0145 family - - - 0.000000000000000000000000000000000000000000004704 164.0
DYD1_k127_3836832_5 Belongs to the peptidase M48B family - - - 0.000000000000000000000000000000003161 137.0
DYD1_k127_3836832_7 - - - - 0.00000000000000004439 86.0
DYD1_k127_3843864_0 Aldehyde dehydrogenase family K00128,K00138 - 1.2.1.3 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001367 479.0
DYD1_k127_3843864_1 amidohydrolase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005508 472.0
DYD1_k127_3843864_2 Belongs to the aldehyde dehydrogenase family K22187 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000406 379.0
DYD1_k127_3843864_3 PFAM Sporulation related domain - - - 0.0000000000000000000000000000000000000001138 154.0
DYD1_k127_3843864_4 23S rRNA-intervening sequence protein - - - 0.000000000000000000000000000000000000003716 149.0
DYD1_k127_3847735_0 NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain K00335,K18331 - 1.12.1.3,1.6.5.3 3.358e-264 816.0
DYD1_k127_3847735_1 NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be a menaquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient K00333 - 1.6.5.3 1.087e-241 749.0
DYD1_k127_3847735_2 PFAM NADH ubiquinone oxidoreductase, subunit G, iron-sulphur binding K00336 - 1.6.5.3 6.897e-194 609.0
DYD1_k127_3847735_3 NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient. This subunit may bind ubiquinone K00337 - 1.6.5.3 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009239 556.0
DYD1_k127_3847735_4 NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be a menaquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient K00332 - 1.6.5.3 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000287 293.0
DYD1_k127_3847735_5 NADH-quinone oxidoreductase, E subunit K00334 - 1.6.5.3 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000001311 291.0
DYD1_k127_3847735_6 - - - - 0.000000000000000000000000000000000000000003037 160.0
DYD1_k127_3847735_7 - - - - 0.0000000000000001447 85.0
DYD1_k127_3847735_8 NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be a menaquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient K00331 - 1.6.5.3 0.0000000000002624 69.0
DYD1_k127_3847735_9 Domain of unknown function (DUF4440) - - - 0.0000000000008483 74.0
DYD1_k127_3854383_0 Beta-lactamase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001894 469.0
DYD1_k127_3854383_1 TIGRFAM RNA polymerase sigma factor, sigma-70 family K03088 - - 0.0000000000000000000000000000000000000000000000002224 182.0
DYD1_k127_3854383_2 - - - - 0.000000000000000000000000000000000000000000000002147 180.0
DYD1_k127_3854383_3 domain, Protein - - - 0.000000000000000000000000000000008118 143.0
DYD1_k127_3854383_4 - - - - 0.000000000000211 76.0
DYD1_k127_3857270_0 DNA ligase K01971 - 6.5.1.1 3.267e-213 675.0
DYD1_k127_3857270_1 AAA domain, putative AbiEii toxin, Type IV TA system K01990 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003809 377.0
DYD1_k127_3857270_2 PFAM NAD dependent epimerase dehydratase family K07071 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006039 346.0
DYD1_k127_3857270_3 ABC-2 family transporter protein - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000006822 265.0
DYD1_k127_3857270_4 Insulinase (Peptidase family M16) - - - 0.00000000000000000000000000000000000000000000003768 182.0
DYD1_k127_3857270_5 Addiction module antidote protein, HigA K18831 - - 0.000000000001521 71.0
DYD1_k127_3863244_0 Catalyzes the reversible conversion of 2- phosphoglycerate into phosphoenolpyruvate. It is essential for the degradation of carbohydrates via glycolysis K01689 - 4.2.1.11 6.382e-240 745.0
DYD1_k127_3863244_1 Septum formation initiator - - - 0.000000000000000000000125 101.0
DYD1_k127_3863244_2 - - - - 0.000000005963 58.0
DYD1_k127_3867461_0 the 2 termini fold to resemble tRNA(Ala) and it encodes a tag peptide , a short internal open reading frame. During trans-translation Ala- aminoacylated tmRNA acts like a tRNA, entering the A-site of stalled ribosomes, displacing the stalled mRNA. The ribosome then switches to translate the ORF on the tmRNA K03664 - - 0.0000000000000000000000000000000000000000000000000000000000000000005085 231.0
DYD1_k127_3867461_1 - - - - 0.000000000000000000000000000000000000000000000000000000000000000008327 236.0
DYD1_k127_3867461_2 Component of the acetyl coenzyme A carboxylase (ACC) complex. Biotin carboxylase (BC) catalyzes the carboxylation of biotin on its carrier protein (BCCP) and then the CO(2) group is transferred by the transcarboxylase to acetyl-CoA to form malonyl- CoA K01963 - 2.1.3.15,6.4.1.2 0.000000000000000000000000000000000000000000000000000000000000006994 216.0
DYD1_k127_3867461_3 COG0188 Type IIA topoisomerase (DNA gyrase topo II topoisomerase IV) A subunit K02621 - - 0.00000000003115 64.0
DYD1_k127_386844_0 4-hydroxybenzoate polyprenyltransferase K03179 - 2.5.1.39 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001044 400.0
DYD1_k127_386844_1 that it carries out the mismatch recognition step. This protein has a weak ATPase activity K03555 GO:0003674,GO:0003676,GO:0003677,GO:0003684,GO:0003690,GO:0003824,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0006139,GO:0006259,GO:0006281,GO:0006298,GO:0006725,GO:0006807,GO:0006950,GO:0006974,GO:0008094,GO:0008150,GO:0008152,GO:0009987,GO:0016462,GO:0016787,GO:0016817,GO:0016818,GO:0016887,GO:0017111,GO:0030983,GO:0032300,GO:0032991,GO:0033554,GO:0034641,GO:0042623,GO:0043170,GO:0044237,GO:0044238,GO:0044260,GO:0044424,GO:0044464,GO:0046483,GO:0050896,GO:0051716,GO:0071704,GO:0090304,GO:0097159,GO:1901360,GO:1901363,GO:1990391 - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007879 350.0
DYD1_k127_386844_2 Removes the formyl group from the N-terminal Met of newly synthesized proteins. Requires at least a dipeptide for an efficient rate of reaction. N-terminal L-methionine is a prerequisite for activity but the enzyme has broad specificity at other positions K01462 - 3.5.1.88 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000005143 280.0
DYD1_k127_386844_3 SpoU rRNA Methylase family - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000002904 252.0
DYD1_k127_386844_4 Could be a nuclease involved in processing of the 5'-end of pre-16S rRNA K07447 GO:0000966,GO:0000967,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006139,GO:0006364,GO:0006396,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0009987,GO:0010467,GO:0016070,GO:0016072,GO:0022613,GO:0034470,GO:0034471,GO:0034641,GO:0034660,GO:0042254,GO:0043170,GO:0044085,GO:0044237,GO:0044238,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0071704,GO:0071840,GO:0090304,GO:1901360 - 0.000000000000000000000000000000000000000000000000000000001522 203.0
DYD1_k127_386844_5 NifU-like N terminal domain - - - 0.00000000000000000001114 93.0
DYD1_k127_3871496_0 Catalyzes the attachment of L-aspartate to tRNA(Asp) in a two-step reaction L-aspartate is first activated by ATP to form Asp-AMP and then transferred to the acceptor end of tRNA(Asp) K01876 - 6.1.1.12 1.06e-301 934.0
DYD1_k127_3871496_1 Belongs to the MtfA family K09933 - - 0.0000000000000000000000000000000000000000000003595 176.0
DYD1_k127_3871496_2 alpha/beta hydrolase fold - - - 0.000000000000855 72.0
DYD1_k127_387342_0 This is 1 of the proteins that binds and probably mediates the attachment of the 5S RNA into the large ribosomal subunit, where it forms part of the central protuberance. In the 70S ribosome it contacts protein S13 of the 30S subunit (bridge B1b), connecting the 2 subunits K02931 GO:0000027,GO:0003674,GO:0003676,GO:0003723,GO:0003735,GO:0005198,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0006412,GO:0006518,GO:0006807,GO:0006996,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0015934,GO:0016043,GO:0019538,GO:0022607,GO:0022613,GO:0022618,GO:0022625,GO:0022626,GO:0032991,GO:0034622,GO:0034641,GO:0034645,GO:0042254,GO:0042255,GO:0042273,GO:0043043,GO:0043170,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043603,GO:0043604,GO:0043933,GO:0044085,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:0065003,GO:0070925,GO:0071704,GO:0071826,GO:0071840,GO:0097159,GO:1901363,GO:1901564,GO:1901566,GO:1901576,GO:1990904 - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009121 330.0
DYD1_k127_387342_1 One of the primary rRNA binding proteins, it binds directly to 16S rRNA central domain where it helps coordinate assembly of the platform of the 30S subunit K02994 GO:0003674,GO:0003735,GO:0005198,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0015935,GO:0022626,GO:0022627,GO:0032991,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:1990904 - 0.0000000000000000000000000000000000000000000000000000000000000000000000586 241.0
DYD1_k127_387342_2 Binds 16S rRNA, required for the assembly of 30S particles and may also be responsible for determining the conformation of the 16S rRNA at the A site K02954 GO:0003674,GO:0003735,GO:0005198,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005840,GO:0006412,GO:0006518,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0015935,GO:0019538,GO:0032991,GO:0034641,GO:0034645,GO:0043043,GO:0043170,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044446,GO:0044464,GO:0071704,GO:1901564,GO:1901566,GO:1901576,GO:1990904 - 0.000000000000000000000000000000000000001857 149.0
DYD1_k127_387342_3 Binds to 23S rRNA. Forms part of two intersubunit bridges in the 70S ribosome K02874 GO:0003674,GO:0003676,GO:0003723,GO:0003735,GO:0005198,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0015934,GO:0019843,GO:0022625,GO:0022626,GO:0032991,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:0070180,GO:0097159,GO:1901363,GO:1990904 - 0.000000000000002608 75.0
DYD1_k127_3875446_0 Belongs to the SEDS family K03588 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002029 580.0
DYD1_k127_3878173_0 Sodium pump that utilizes the energy of pyrophosphate hydrolysis as the driving force for Na( ) movement across the membrane K15987 - 3.6.1.1 4.398e-199 625.0
DYD1_k127_3878173_1 LytTr DNA-binding domain - - - 0.0000000000000000003835 89.0
DYD1_k127_3884354_0 Methyltransferase domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001148 428.0
DYD1_k127_3884354_1 endonuclease containing a URI domain K07461 - - 0.0000000000000000000000000000003232 125.0
DYD1_k127_3884354_2 involved in cell wall biogenesis - - - 0.000000000000000000000000884 108.0
DYD1_k127_3884354_3 Asparagine synthase K01953 - 6.3.5.4 0.00000000000005343 72.0
DYD1_k127_3889106_0 Gluconate 2-dehydrogenase subunit 3 - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000001091 297.0
DYD1_k127_3889106_1 - - - - 0.0000000000000000000000000000000000006837 147.0
DYD1_k127_3889106_2 response to hydrogen peroxide K03668,K09914 GO:0000302,GO:0006950,GO:0006974,GO:0006979,GO:0008150,GO:0009636,GO:0009987,GO:0010035,GO:0033554,GO:0042221,GO:0042493,GO:0042542,GO:0042710,GO:0044010,GO:0044764,GO:0046677,GO:0050896,GO:0051704,GO:0051716,GO:1901700 - 0.0000000000001719 77.0
DYD1_k127_3889459_0 Belongs to the sodium solute symporter (SSF) (TC 2.A.21) family - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002314 528.0
DYD1_k127_3889459_1 Cytokinin riboside 5'-monophosphate phosphoribohydrolase K06966 - 3.2.2.10 0.00000000000000000000000000000000000000000000003272 172.0
DYD1_k127_3904527_0 Iron-containing alcohol dehydrogenase K19714 - 1.1.3.48 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002882 512.0
DYD1_k127_3904527_1 Cys/Met metabolism PLP-dependent enzyme K19715 - 2.6.1.109 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000006158 279.0
DYD1_k127_3918138_0 Ribosomal protein L11 methyltransferase K02687 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001918 465.0
DYD1_k127_3918138_1 Belongs to the ClpS family K06891 - - 0.0000000000000000000000000000000000000000001089 160.0
DYD1_k127_392434_0 Cys/Met metabolism PLP-dependent enzyme - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008431 586.0
DYD1_k127_392434_1 Biotin-lipoyl like K02005 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001009 535.0
DYD1_k127_392434_2 Amino acid permease K03294 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001014 512.0
DYD1_k127_392434_3 Glycerol-3-phosphate dehydrogenase K00057 - 1.1.1.94 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003081 424.0
DYD1_k127_392434_4 outer membrane efflux protein K12340 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002816 388.0
DYD1_k127_392434_5 TonB-dependent receptor K02014 - - 0.000000000000000000000000000000000000000000000000008632 183.0
DYD1_k127_392434_7 PFAM Plasmid stabilisation system K06218 - - 0.000000000009055 66.0
DYD1_k127_3936311_0 Asparagine synthase K01953 - 6.3.5.4 7.939e-211 672.0
DYD1_k127_3936311_1 PFAM Cys Met metabolism K01739,K01758,K01760 - 2.5.1.48,4.4.1.1,4.4.1.8 1.929e-202 635.0
DYD1_k127_3936311_10 - - - - 0.00000000000667 66.0
DYD1_k127_3936311_2 Protein of unknown function (DUF2400) - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003184 349.0
DYD1_k127_3936311_3 Protein of unknown function (DUF2911) - - - 0.000000000000000000000000000000000000000000000000000000000000000000251 235.0
DYD1_k127_3936311_4 Acyl carrier protein phosphodiesterase - - - 0.000000000000000000000000000000000000000000000000000000000000000002155 231.0
DYD1_k127_3936311_5 Protein of unknown function (DUF2911) - - - 0.00000000000000000000000000000000000000000000000000000000000000001266 230.0
DYD1_k127_3936311_6 SdpI/YhfL protein family - - - 0.0000000000000000000000000000000000000000000000000000006967 200.0
DYD1_k127_3936311_7 Involved in the tonB-independent uptake of proteins K03641,K07277 - - 0.00000000000000000000000000000000000000000001211 166.0
DYD1_k127_3936311_8 helix_turn_helix, Arsenical Resistance Operon Repressor - - - 0.00000000000000000000000000000000001227 137.0
DYD1_k127_3945840_0 Glycosyltransferase Family 4 - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002269 348.0
DYD1_k127_3945840_1 Glycosyltransferase like family 2 - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001459 323.0
DYD1_k127_3945840_2 Glycosyltransferase like family 2 - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000004475 280.0
DYD1_k127_3945840_3 involved in cell wall biogenesis - - - 0.000000000000000000000000000000000000000000002152 172.0
DYD1_k127_3951436_0 Belongs to the DegT DnrJ EryC1 family K02805 - 2.6.1.59 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000428 558.0
DYD1_k127_3951436_1 FR47-like protein K16704 - 2.3.1.210 0.0000000000000000000000000000000000001449 151.0
DYD1_k127_3954958_0 Belongs to the class IV-like SAM-binding methyltransferase superfamily. RNA methyltransferase TrmH family K03437 - - 0.00000000000000000000000000000000000000000000000000000000000000000002798 239.0
DYD1_k127_3954958_1 Transposase IS200 like - - - 0.000000000000000000000000000000000000000000000000000000002637 206.0
DYD1_k127_3955296_0 OstA-like protein - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003555 525.0
DYD1_k127_3957052_0 ABC transporter K18889 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008536 404.0
DYD1_k127_3957052_1 PAS domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006597 410.0
DYD1_k127_3957052_2 phosphorelay signal transduction system - - - 0.00000000019 62.0
DYD1_k127_3960245_0 DNA helicase K03657 - 3.6.4.12 0.00000000000000000000000000000000000000000000000000000000000000004775 223.0
DYD1_k127_3960245_1 Histidine kinase - - - 0.000000000001599 81.0
DYD1_k127_3960245_2 Belongs to the UPF0337 (CsbD) family - - - 0.000007628 50.0
DYD1_k127_3963914_0 Cleaves the N-terminal amino acid of tripeptides K01258 - 3.4.11.4 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001159 582.0
DYD1_k127_3963914_1 Methylates the class 1 translation termination release factors RF1 PrfA and RF2 PrfB on the glutamine residue of the universally conserved GGQ motif K02493 GO:0003674,GO:0003824,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0008150,GO:0008152,GO:0008168,GO:0008757,GO:0016740,GO:0016741,GO:0032259,GO:0044424,GO:0044444,GO:0044464 2.1.1.297 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000003942 298.0
DYD1_k127_3963914_2 PFAM MotA TolQ ExbB proton channel K03561 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000004737 267.0
DYD1_k127_3963914_3 - - - - 0.0000000000000000000000000000000012 138.0
DYD1_k127_3963914_4 Biopolymer transport protein ExbD TolR K03559 - - 0.0000000000000000000000000005669 117.0
DYD1_k127_3963914_5 Peptidyl-prolyl cis-trans isomerase K01802,K03774,K03775 - 5.2.1.8 0.00000000000000000000001408 101.0
DYD1_k127_3968533_0 Peptidase M14, carboxypeptidase A - - - 3.268e-227 712.0
DYD1_k127_3977919_0 that it carries out the mismatch recognition step. This protein has a weak ATPase activity K03555 GO:0003674,GO:0003676,GO:0003677,GO:0003684,GO:0003690,GO:0003824,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0006139,GO:0006259,GO:0006281,GO:0006298,GO:0006725,GO:0006807,GO:0006950,GO:0006974,GO:0008094,GO:0008150,GO:0008152,GO:0009987,GO:0016462,GO:0016787,GO:0016817,GO:0016818,GO:0016887,GO:0017111,GO:0030983,GO:0032300,GO:0032991,GO:0033554,GO:0034641,GO:0042623,GO:0043170,GO:0044237,GO:0044238,GO:0044260,GO:0044424,GO:0044464,GO:0046483,GO:0050896,GO:0051716,GO:0071704,GO:0090304,GO:0097159,GO:1901360,GO:1901363,GO:1990391 - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008214 421.0
DYD1_k127_3977919_1 Catalyzes the first step in hexosamine metabolism, converting fructose-6P into glucosamine-6P using glutamine as a nitrogen source K00820 GO:0003674,GO:0003824,GO:0004360,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006002,GO:0006040,GO:0006047,GO:0006139,GO:0006464,GO:0006486,GO:0006487,GO:0006725,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0008483,GO:0009058,GO:0009059,GO:0009100,GO:0009101,GO:0009225,GO:0009987,GO:0016740,GO:0016769,GO:0019538,GO:0019637,GO:0034641,GO:0034645,GO:0036211,GO:0043170,GO:0043412,GO:0043413,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044281,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0055086,GO:0070085,GO:0070548,GO:0071704,GO:1901135,GO:1901137,GO:1901360,GO:1901564,GO:1901566,GO:1901576 2.6.1.16 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000002729 278.0
DYD1_k127_3977919_2 CHRD domain - - - 0.000000000000000000000004078 108.0
DYD1_k127_3977919_3 Histidine kinase - - - 0.0000000000005784 74.0
DYD1_k127_3995173_0 Catalyzes the conversion of dihydroorotate to orotate with quinone as electron acceptor K00254 - 1.3.5.2 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001611 492.0
DYD1_k127_3995173_1 Catalyzes the synthesis of acetoacetyl coenzyme A from two molecules of acetyl coenzyme A. It can also act as a thiolase, catalyzing the reverse reaction and generating two-carbon units from the four-carbon product of fatty acid oxidation K00632 - 2.3.1.16 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001053 432.0
DYD1_k127_3995173_2 Integral membrane protein TerC family - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008778 343.0
DYD1_k127_3995173_3 Pkd domain containing protein - - - 0.00000000000000000000002137 111.0
DYD1_k127_3995173_4 amine dehydrogenase activity - - - 0.0000000000000000004669 98.0
DYD1_k127_3999102_0 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003601 338.0
DYD1_k127_4001102_0 Amidophosphoribosyltransferase K00764 - 2.4.2.14 1.661e-258 803.0
DYD1_k127_4001102_1 Phosphoglycerate mutase family K08296 - - 0.000000000000000000000000000000000000000000000000000000001357 205.0
DYD1_k127_4009472_0 PFAM Shikimate dehydrogenase substrate binding K00014 - 1.1.1.25 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000334 314.0
DYD1_k127_4009472_1 PFAM (2R)-phospho-3-sulfolactate synthase ComA K08097 - 4.4.1.19 0.000000000000000000000000000000000000000000000000000000000000000000000000006792 252.0
DYD1_k127_4009472_2 Thioesterase-like superfamily - - - 0.000000001003 61.0
DYD1_k127_4015243_0 Belongs to the folylpolyglutamate synthase family K11754 - 6.3.2.12,6.3.2.17 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000002522 292.0
DYD1_k127_4015243_1 pfam nudix - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000001086 270.0
DYD1_k127_4015243_2 DinB superfamily - - - 0.000000000000000000000000000000000000000001067 158.0
DYD1_k127_403221_0 Fatty acid desaturase K00508 - 1.14.19.3 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002958 338.0
DYD1_k127_403221_1 Gliding motility protein, GldB - - - 0.0000000000000000000000000000000000000000000000007205 182.0
DYD1_k127_4047364_0 Protein conserved in bacteria - - - 0.0 1182.0
DYD1_k127_4068465_0 PFAM Outer membrane efflux protein - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000001289 259.0
DYD1_k127_4068465_1 Catalyzes the conversion of N5-carboxyaminoimidazole ribonucleotide (N5-CAIR) to 4-carboxy-5-aminoimidazole ribonucleotide (CAIR) K01588 - 5.4.99.18 0.000000000000000000000000000000000000000000000000000000000000000000000000004688 256.0
DYD1_k127_4068465_2 - - - - 0.00000000000000000000000000000000000000000009161 171.0
DYD1_k127_4075373_0 Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family K00821 - 2.6.1.11,2.6.1.17 1.87e-214 670.0
DYD1_k127_4075373_1 Belongs to the ATCase OTCase family K09065,K13043 GO:0000050,GO:0003674,GO:0003824,GO:0004585,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006082,GO:0006520,GO:0006525,GO:0006526,GO:0006591,GO:0006807,GO:0008150,GO:0008152,GO:0008652,GO:0009058,GO:0009064,GO:0009084,GO:0009987,GO:0016053,GO:0016740,GO:0016741,GO:0016743,GO:0019627,GO:0019752,GO:0034641,GO:0042450,GO:0043436,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0044283,GO:0044424,GO:0044464,GO:0046394,GO:0071704,GO:0071941,GO:1901564,GO:1901566,GO:1901576,GO:1901605,GO:1901607 2.1.3.11,2.1.3.9 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009629 509.0
DYD1_k127_4075373_2 Belongs to the acetylglutamate kinase family. ArgB subfamily K00930 GO:0003674,GO:0003824,GO:0003991,GO:0005488,GO:0006082,GO:0006520,GO:0006525,GO:0006526,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0008652,GO:0009058,GO:0009064,GO:0009084,GO:0009987,GO:0016053,GO:0016301,GO:0016310,GO:0016597,GO:0016740,GO:0016772,GO:0016774,GO:0019752,GO:0031406,GO:0034618,GO:0036094,GO:0043167,GO:0043168,GO:0043169,GO:0043177,GO:0043436,GO:0044237,GO:0044238,GO:0044249,GO:0044281,GO:0044283,GO:0046394,GO:0071704,GO:1901564,GO:1901566,GO:1901576,GO:1901605,GO:1901607 2.7.2.8 0.00000000000000000000000000000000000000897 145.0
DYD1_k127_4075373_3 Catalyzes the NADPH-dependent reduction of N-acetyl-5- glutamyl phosphate to yield N-acetyl-L-glutamate 5-semialdehyde K00145 - 1.2.1.38 0.000000000000000000000000000000000002252 139.0
DYD1_k127_407580_0 Belongs to the aldehyde dehydrogenase family K00128 - 1.2.1.3 1.175e-208 656.0
DYD1_k127_407580_1 Belongs to the glutathione peroxidase family K00432 - 1.11.1.9 0.00000000000000000000000000000000000000000000000000000000000000000000000000005298 263.0
DYD1_k127_407580_2 - - - - 0.0000489 46.0
DYD1_k127_4082076_0 RNA polymerase that catalyzes the synthesis of short RNA molecules used as primers for DNA polymerase during DNA replication K02316 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000697 394.0
DYD1_k127_4082076_1 domain, Protein - - - 0.0000000000000000000000000004455 116.0
DYD1_k127_4089560_0 3'-5' exoribonuclease that releases 5'-nucleoside monophosphates and is involved in maturation of structured RNAs K12573,K12585 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000252 347.0
DYD1_k127_4089560_1 Belongs to the FPP GGPP synthase family K13789 - 2.5.1.1,2.5.1.10,2.5.1.29 0.00000000000000000000000000000000000000000000000000000000000000000000000000002347 261.0
DYD1_k127_4096169_0 Belongs to the metallo-dependent hydrolases superfamily. Adenine deaminase family K01486 - 3.5.4.2 2.95e-220 693.0
DYD1_k127_4096169_1 - - - - 0.00000000000000000000001114 108.0
DYD1_k127_4109995_0 Specifically methylates the N4 position of cytidine in position 1402 (C1402) of 16S rRNA K03438 GO:0000154,GO:0001510,GO:0003674,GO:0003824,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006139,GO:0006364,GO:0006396,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0008168,GO:0008170,GO:0008173,GO:0008649,GO:0008757,GO:0009451,GO:0009987,GO:0010467,GO:0016070,GO:0016072,GO:0016434,GO:0016740,GO:0016741,GO:0022613,GO:0031167,GO:0032259,GO:0034470,GO:0034641,GO:0034660,GO:0042254,GO:0043170,GO:0043412,GO:0043414,GO:0044085,GO:0044237,GO:0044238,GO:0044260,GO:0044424,GO:0044464,GO:0046483,GO:0070475,GO:0071424,GO:0071704,GO:0071840,GO:0090304,GO:0140098,GO:0140102,GO:1901360 2.1.1.199 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008111 432.0
DYD1_k127_4109995_1 Transfers and isomerizes the ribose moiety from AdoMet to the 7-aminomethyl group of 7-deazaguanine (preQ1-tRNA) to give epoxyqueuosine (oQ-tRNA) K07568 - 2.4.99.17 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005731 333.0
DYD1_k127_4109995_2 Belongs to the MraZ family K03925 GO:0000976,GO:0001067,GO:0003674,GO:0003676,GO:0003677,GO:0003690,GO:0003700,GO:0005488,GO:0006355,GO:0008150,GO:0009889,GO:0009890,GO:0009892,GO:0010468,GO:0010556,GO:0010558,GO:0010605,GO:0010629,GO:0019219,GO:0019222,GO:0031323,GO:0031324,GO:0031326,GO:0031327,GO:0031333,GO:0043254,GO:0043565,GO:0044087,GO:0044212,GO:0045892,GO:0045934,GO:0048519,GO:0048523,GO:0050789,GO:0050794,GO:0051128,GO:0051129,GO:0051171,GO:0051172,GO:0051252,GO:0051253,GO:0060255,GO:0065007,GO:0080090,GO:0097159,GO:0140110,GO:1901363,GO:1902679,GO:1903506,GO:1903507,GO:1990837,GO:2000112,GO:2000113,GO:2000142,GO:2000143,GO:2001141 - 0.0000000000000000000000000000000000000000000000000000000000000000000158 235.0
DYD1_k127_4109995_4 - - - - 0.000000000000000000000000000000001141 132.0
DYD1_k127_4109995_5 AcrB/AcrD/AcrF family K18138 - - 0.0000000001803 62.0
DYD1_k127_4113553_0 Catalyzes the hydrolysis of AMP to form adenine and ribose 5-phosphate using water as the nucleophile K01241 - 3.2.2.4 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001297 456.0
DYD1_k127_4113553_1 Transfers and isomerizes the ribose moiety from AdoMet to the 7-aminomethyl group of 7-deazaguanine (preQ1-tRNA) to give epoxyqueuosine (oQ-tRNA) K07568 - 2.4.99.17 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005397 434.0
DYD1_k127_4113553_2 Type I restriction enzyme R protein N terminus (HSDR_N) - - - 0.00000000000000000000000000000000000000000000000000002047 192.0
DYD1_k127_4113553_3 Participates in the translocation of lipoproteins from the inner membrane to the outer membrane. Only forms a complex with a lipoprotein if the residue after the N-terminal Cys is not an aspartate (The Asp acts as a targeting signal to indicate that the lipoprotein should stay in the inner membrane) - - - 0.0000000324 57.0
DYD1_k127_4116056_0 Glycosyltransferase like family 2 - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001353 469.0
DYD1_k127_4116056_1 Uncharacterised protein family (UPF0104) K07027 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000003008 256.0
DYD1_k127_4116056_2 Pfam PAP2 superfamily - - - 0.000000000000000000000000000000000004986 144.0
DYD1_k127_4116056_3 Y_Y_Y domain - - - 0.0000000000000000000000002578 115.0
DYD1_k127_412228_0 Putative lumazine-binding - - - 0.0000000000000000000000000000000000000000000007103 169.0
DYD1_k127_412228_1 cheY-homologous receiver domain - - - 0.00000000000000000000000000000000004051 139.0
DYD1_k127_4128049_0 transferase activity, transferring glycosyl groups - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005242 493.0
DYD1_k127_4128049_1 - - - - 0.00000000000000000000000000003067 119.0
DYD1_k127_4128049_2 COG4464 Capsular polysaccharide biosynthesis protein K01104 - 3.1.3.48 0.000000000000000002234 85.0
DYD1_k127_4131894_0 The UvrABC repair system catalyzes the recognition and processing of DNA lesions. UvrA is an ATPase and a DNA-binding protein. A damage recognition complex composed of 2 UvrA and 2 UvrB subunits scans DNA for abnormalities. When the presence of a lesion has been verified by UvrB, the UvrA molecules dissociate K03701 - - 3.383e-263 819.0
DYD1_k127_4151417_0 DNA polymerase III K02342 - 2.7.7.7 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009093 426.0
DYD1_k127_4151417_1 PFAM Glycosyl transferase family 2 K00721 - 2.4.1.83 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004119 396.0
DYD1_k127_4151417_2 PFAM EamA-like transporter family - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001216 327.0
DYD1_k127_4151417_3 Methionine biosynthesis protein MetW - - - 0.000000000000000000000000000000000000000000000000000000000000000008944 234.0
DYD1_k127_4151417_4 peptidase S9 prolyl oligopeptidase active site domain protein - - - 0.0000000000000000000000000000000000000741 147.0
DYD1_k127_4151417_5 phosphorelay signal transduction system - - - 0.0007745 42.0
DYD1_k127_4159980_0 Gaf domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002156 514.0
DYD1_k127_4159980_1 Calcineurin-like phosphoesterase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000168 280.0
DYD1_k127_4170968_0 Peptidase family C25 - - - 2.754e-213 685.0
DYD1_k127_4195874_0 Converts 2C-methyl-D-erythritol 2,4-cyclodiphosphate (ME-2,4cPP) into 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate K03526 GO:0003674,GO:0003824,GO:0006081,GO:0006082,GO:0006090,GO:0006629,GO:0006644,GO:0006720,GO:0006793,GO:0006796,GO:0008150,GO:0008152,GO:0008299,GO:0008610,GO:0008654,GO:0009058,GO:0009240,GO:0009987,GO:0016491,GO:0016725,GO:0019288,GO:0019637,GO:0019682,GO:0019752,GO:0032787,GO:0043436,GO:0044237,GO:0044238,GO:0044249,GO:0044255,GO:0044281,GO:0046429,GO:0046490,GO:0052592,GO:0055114,GO:0071704,GO:0090407,GO:1901135,GO:1901576 1.17.7.1,1.17.7.3 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004107 514.0
DYD1_k127_4195874_1 Penicillin binding protein transpeptidase domain K17838 - 3.5.2.6 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001577 391.0
DYD1_k127_4195874_2 von Willebrand factor, type A K07114 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001039 332.0
DYD1_k127_4195874_3 belongs to the thioredoxin family K20541 - - 0.000000000000000000000000001106 121.0
DYD1_k127_4203085_0 Outer membrane protein beta-barrel domain - - - 0.000000000000000000000000000000000000000000007358 169.0
DYD1_k127_4203085_1 The UvrABC repair system catalyzes the recognition and processing of DNA lesions. UvrA is an ATPase and a DNA-binding protein. A damage recognition complex composed of 2 UvrA and 2 UvrB subunits scans DNA for abnormalities. When the presence of a lesion has been verified by UvrB, the UvrA molecules dissociate K03701 - - 0.00000000000000000000000000000000000000000007917 160.0
DYD1_k127_4203085_2 Yip1 domain - - - 0.00000000000000000000000000000002284 134.0
DYD1_k127_4218410_0 metallophosphoesterase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004993 604.0
DYD1_k127_4219393_0 DNA polymerase III is a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria. This DNA polymerase also exhibits 3' to 5' exonuclease activity K02343 - 2.7.7.7 4.19e-232 733.0
DYD1_k127_4219393_1 Two component transcriptional regulator, LuxR family - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003235 377.0
DYD1_k127_4219393_2 Psort location Cytoplasmic, score 8.96 - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001157 309.0
DYD1_k127_4219393_3 Mycolic acid cyclopropane synthetase - - - 0.000000000000000000000000000000000000006265 154.0
DYD1_k127_4224996_0 Belongs to the isocitrate and isopropylmalate dehydrogenases family K00031 - 1.1.1.42 2.311e-251 777.0
DYD1_k127_4224996_2 PFAM ZIP Zinc transporter K07238 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002213 417.0
DYD1_k127_4224996_3 Iron dependent repressor, metal binding and dimerisation domain K03709 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000003016 287.0
DYD1_k127_4224996_5 cyclic nucleotide binding - - - 0.00000000000000000000000000000000000000000000000000000000000000000003195 237.0
DYD1_k127_4224996_6 Protease prsW family - - - 0.000000000000000000000000000001641 124.0
DYD1_k127_4230317_0 Belongs to the peptidase S8 family K08651,K14645 - 3.4.21.66 0.00000000000000000000000000000000000000000000000000000004952 209.0
DYD1_k127_4235126_0 Prolyl oligopeptidase family - - - 1.033e-304 944.0
DYD1_k127_4235126_1 Anthranilate synthase K01657 - 4.1.3.27 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007632 335.0
DYD1_k127_4235126_2 GCN5-related N-acetyl-transferase K06975 - - 0.00000000000000000000000000002454 119.0
DYD1_k127_4236589_0 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase - - - 0.000000000000000000000000000000000000000000000000000001613 193.0
DYD1_k127_4236589_1 Histidine kinase - - - 0.00005983 53.0
DYD1_k127_4240268_0 Oxidoreductase domain protein K16044 - 1.1.1.371 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001756 430.0
DYD1_k127_4240268_1 PFAM Peptidase S13, D-Ala-D-Ala carboxypeptidase C K07259 - 3.4.16.4 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002187 434.0
DYD1_k127_4240268_2 This protein is involved in the repair of mismatches in DNA. It is required for dam-dependent methyl-directed DNA mismatch repair. May act as a molecular matchmaker , a protein that promotes the formation of a stable complex between two or more DNA-binding proteins in an ATP-dependent manner without itself being part of a final effector complex K03572 GO:0003674,GO:0003676,GO:0003677,GO:0003697,GO:0003824,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0006139,GO:0006259,GO:0006281,GO:0006298,GO:0006725,GO:0006807,GO:0006950,GO:0006974,GO:0008150,GO:0008152,GO:0009987,GO:0016462,GO:0016787,GO:0016817,GO:0016818,GO:0016887,GO:0017111,GO:0032300,GO:0032991,GO:0033554,GO:0034641,GO:0043170,GO:0044237,GO:0044238,GO:0044260,GO:0044424,GO:0044464,GO:0046483,GO:0050896,GO:0051716,GO:0071704,GO:0090304,GO:0097159,GO:1901360,GO:1901363,GO:1990391 - 0.0000000000000000000000000000000000000000000000000000000000000000000000001481 253.0
DYD1_k127_4251305_0 Protein of unknown function (DUF2851) - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005983 408.0
DYD1_k127_4251305_1 Domain of unknown function (DUF4844) - - - 0.00000000000000000001133 95.0
DYD1_k127_4268197_0 WD40 repeats - - - 0.0006984 52.0
DYD1_k127_4281117_0 Carboxypeptidase regulatory-like domain - - - 3.957e-227 721.0
DYD1_k127_4281117_1 Catalyzes the conversion of D-ribulose 5-phosphate to formate and 3,4-dihydroxy-2-butanone 4-phosphate K14652 - 3.5.4.25,4.1.99.12 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004108 344.0
DYD1_k127_4308870_0 Penicillin-binding protein 2 K05515 - 3.4.16.4 1.055e-315 979.0
DYD1_k127_4308870_1 Cell shape determining protein MreB Mrl K03569 - - 4.246e-211 657.0
DYD1_k127_4308870_2 amino acid peptide transporter K03305 - - 5.862e-208 659.0
DYD1_k127_4308870_3 Belongs to the GARS family K01945 - 6.3.4.13 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002371 562.0
DYD1_k127_4308870_4 Tryptophan 2,3-dioxygenase K00453 - 1.13.11.11 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001111 468.0
DYD1_k127_4308870_5 Belongs to the SEDS family K05837 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000493 343.0
DYD1_k127_4308870_6 shape-determining protein MreC K03570 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000007725 289.0
DYD1_k127_4308870_7 rod shape-determining protein MreD - - - 0.00000000000000000000000000000000000000000000000000000000001532 210.0
DYD1_k127_4308870_8 Has lipid A 3-O-deacylase activity. Hydrolyzes the ester bond at the 3 position of lipid A, a bioactive component of lipopolysaccharide (LPS), thereby releasing the primary fatty acyl moiety - - - 0.0000000000000000000000000000000000000000000000000001781 189.0
DYD1_k127_4323825_0 - - - - 0.000000000000000000000000000003326 125.0
DYD1_k127_4323825_1 PFAM Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase - - - 0.0000000000000000000006754 104.0
DYD1_k127_4327342_0 Histidine kinase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001129 417.0
DYD1_k127_4327342_1 Transcriptional regulatory protein, C terminal - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000523 349.0
DYD1_k127_432838_0 Peptidase M1, membrane alanine aminopeptidase K01256 - 3.4.11.2 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002733 595.0
DYD1_k127_4332621_0 transport, permease protein K01992 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000001131 297.0
DYD1_k127_4366241_0 COG1680 Beta-lactamase class C and other penicillin binding proteins - - - 0.0000000000000000000000000001807 132.0
DYD1_k127_4366241_1 Catalyzes the attachment of tyrosine to tRNA(Tyr) in a two-step reaction tyrosine is first activated by ATP to form Tyr- AMP and then transferred to the acceptor end of tRNA(Tyr) K01866 GO:0003674,GO:0003824,GO:0004812,GO:0004831,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006082,GO:0006139,GO:0006399,GO:0006520,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0009987,GO:0016070,GO:0016874,GO:0016875,GO:0019752,GO:0034641,GO:0034660,GO:0043038,GO:0043039,GO:0043170,GO:0043436,GO:0044237,GO:0044238,GO:0044281,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0071704,GO:0090304,GO:0140098,GO:0140101,GO:1901360,GO:1901564 6.1.1.1 0.00000000000000000000000004133 108.0
DYD1_k127_43810_0 COGs COG1132 ABC-type multidrug transport system ATPase and permease components K06148 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002805 330.0
DYD1_k127_43810_1 Glycosyl transferases group 1 - - - 0.000001128 54.0
DYD1_k127_4382010_0 Oxidoreductase - - - 0.00000000000000000000000000000000000000000009179 160.0
DYD1_k127_4382010_1 TfoX N-terminal domain - - - 0.00000000000000000000000006439 111.0
DYD1_k127_4382010_2 protein-S-isoprenylcysteine methyltransferase - - - 0.000000000000000000008952 98.0
DYD1_k127_4382010_3 - - - - 0.000008327 50.0
DYD1_k127_438671_0 Appr-1'-p processing enzyme - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000002097 260.0
DYD1_k127_438671_1 PFAM Short-chain dehydrogenase reductase SDR - - - 0.0000000000000000000000000000000000000000000000000004843 189.0
DYD1_k127_438671_2 TonB family domain protein - - - 0.0000000000000000000000000000000000000000000003532 177.0
DYD1_k127_438671_3 Belongs to the folylpolyglutamate synthase family K11754 - 6.3.2.12,6.3.2.17 0.0000000000000000000001292 98.0
DYD1_k127_4389786_0 Carbamoyl-phosphate synthase K01955 - 6.3.5.5 0.0 1062.0
DYD1_k127_4391813_0 Produces ATP from ADP in the presence of a proton gradient across the membrane. The alpha chain is a regulatory subunit K02111 - 3.6.3.14 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002958 541.0
DYD1_k127_4391813_1 F(1)F(0) ATP synthase produces ATP from ADP in the presence of a proton or sodium gradient. F-type ATPases consist of two structural domains, F(1) containing the extramembraneous catalytic core and F(0) containing the membrane proton channel, linked together by a central stalk and a peripheral stalk. During catalysis, ATP synthesis in the catalytic domain of F(1) is coupled via a rotary mechanism of the central stalk subunits to proton translocation K02113 - - 0.000000000000000000000000000000000000000000000000000000000000000000000003517 248.0
DYD1_k127_4391813_2 Component of the F(0) channel, it forms part of the peripheral stalk, linking F(1) to F(0) K02109 - - 0.0000003431 52.0
DYD1_k127_4392626_0 Phenylacetic acid catabolic protein K02609 - 1.14.13.149 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000951 556.0
DYD1_k127_4392626_1 Oxidoreductase FAD-binding domain K02613 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002022 460.0
DYD1_k127_4392626_2 Phenylacetic acid catabolic protein K02611 - 1.14.13.149 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003703 373.0
DYD1_k127_4392626_3 Transcriptional regulator, TetR family - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000043 259.0
DYD1_k127_4392626_4 Phenylacetic acid degradation B K02610 - - 0.0000000000000000000000000000000000000000000000000000000000000004289 221.0
DYD1_k127_4392626_5 Enoyl-CoA hydratase/isomerase K15866 - 5.3.3.18 0.0000000000000000000000000000000000000000000000000000000002393 207.0
DYD1_k127_4392626_6 Phenylacetate-CoA oxygenase K02612 - - 0.0000000000000000000000000000000000000000000000000000001764 199.0
DYD1_k127_4392626_7 Belongs to the urease beta subunit family K01429 - 3.5.1.5 0.000000000000000000000000000008332 119.0
DYD1_k127_4407050_0 Involved in transcription antitermination. Required for transcription of ribosomal RNA (rRNA) genes. Binds specifically to the boxA antiterminator sequence of the ribosomal RNA (rrn) operons K03625 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005346 381.0
DYD1_k127_4407050_1 Catalyzes the phosphorylation of the 3'-hydroxyl group of dephosphocoenzyme A to form coenzyme A K00859 GO:0003674,GO:0003824,GO:0004140,GO:0006139,GO:0006163,GO:0006164,GO:0006725,GO:0006732,GO:0006753,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009108,GO:0009117,GO:0009150,GO:0009152,GO:0009165,GO:0009259,GO:0009260,GO:0009987,GO:0015936,GO:0015937,GO:0016301,GO:0016310,GO:0016740,GO:0016772,GO:0016773,GO:0018130,GO:0019438,GO:0019637,GO:0019693,GO:0033865,GO:0033866,GO:0033875,GO:0034030,GO:0034032,GO:0034033,GO:0034641,GO:0034654,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0046390,GO:0046483,GO:0051186,GO:0051188,GO:0055086,GO:0071704,GO:0072521,GO:0072522,GO:0090407,GO:1901135,GO:1901137,GO:1901293,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576 2.7.1.24 0.0000000000000000000000000000000000000000000000000000000000000000000000002438 252.0
DYD1_k127_4407050_2 Preprotein translocase subunit YajC K03210 - - 0.000000000000000000000000000000000000001964 151.0
DYD1_k127_4407050_3 Protein of unknown function (DUF1573) - - - 0.00000000000000000000000000000009827 129.0
DYD1_k127_4411348_0 Tricorn protease homolog K08676 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004798 337.0
DYD1_k127_4411348_1 ATPases associated with a variety of cellular activities - - - 0.00000000000000000021 97.0
DYD1_k127_4416541_0 metallophosphoesterase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000032 303.0
DYD1_k127_4416541_1 ubiE/COQ5 methyltransferase family - - - 0.000000000000000009071 86.0
DYD1_k127_4423352_0 Required for disulfide bond formation in some periplasmic proteins. Acts by transferring its disulfide bond to other proteins and is reduced in the process - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000001165 284.0
DYD1_k127_4423352_1 PFAM Cytochrome c - - - 0.0000000000000000000000000000000000000000000000000000000000000000000001045 245.0
DYD1_k127_4423352_2 Part of a stress-induced multi-chaperone system, it is involved in the recovery of the cell from heat-induced damage, in cooperation with DnaK, DnaJ and GrpE K03695 - - 0.00000000000000000003596 94.0
DYD1_k127_4423352_3 - - - - 0.0000000000000000001348 94.0
DYD1_k127_4423352_4 Domain of unknown function (DUF1905) - - - 0.0000003026 51.0
DYD1_k127_4430769_0 Catalyzes the condensation reaction of fatty acid synthesis by the addition to an acyl acceptor of two carbons from malonyl-ACP K09458 - 2.3.1.179 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001458 417.0
DYD1_k127_4430769_1 PhoD-like phosphatase K01113 - 3.1.3.1 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002033 337.0
DYD1_k127_4430769_2 Acetyltransferase (GNAT) domain - - - 0.0000000000000000000000000000000000000000000000000000000000000005681 221.0
DYD1_k127_4430769_3 YcxB-like protein - - - 0.0000000000000000000000000000000000000000000000000000007311 196.0
DYD1_k127_4430769_4 Carrier of the growing fatty acid chain in fatty acid biosynthesis K02078 - - 0.000000000000000000000000000000000000001247 148.0
DYD1_k127_4430769_5 domain, Protein K00666,K03561,K14645 - - 0.00000000000000339 85.0
DYD1_k127_4430769_6 - - - - 0.00009621 51.0
DYD1_k127_4440707_0 Tetratricopeptide repeat - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007645 323.0
DYD1_k127_4440707_1 Tetratricopeptide repeat - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000002309 281.0
DYD1_k127_4440707_2 - - - - 0.00000000000000000000000000000000000000000000001167 183.0
DYD1_k127_4441170_0 Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family K03296,K18138 - - 4.545e-308 957.0
DYD1_k127_4441170_1 PFAM Outer membrane efflux protein - - - 0.0000000000000000000000000000000000000000000000000000000000000001461 226.0
DYD1_k127_44619_0 Involved in targeting and insertion of nascent membrane proteins into the cytoplasmic membrane. Acts as a receptor for the complex formed by the signal recognition particle (SRP) and the ribosome-nascent chain (RNC) K03110 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000267 533.0
DYD1_k127_44619_1 Na( ) H( ) antiporter that extrudes sodium in exchange for external protons K03313 - - 0.0000000000000000000000000000000000000000000000000000000001815 207.0
DYD1_k127_44619_2 Domain of unknown function (DUF4295) - - - 0.000000000000000000151 88.0
DYD1_k127_4465694_0 aconitate hydratase K01681 - 4.2.1.3 0.0 1103.0
DYD1_k127_4466202_0 Acyl-protein synthetase, LuxE - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001409 408.0
DYD1_k127_4466202_1 Two component transcriptional regulator, winged helix family - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000005344 287.0
DYD1_k127_4466202_2 His Kinase A (phosphoacceptor) domain K07636 - 2.7.13.3 0.000000000000000000000000000000000000000000000000000000000000000000000000000025 266.0
DYD1_k127_4466202_3 Catalyzes the prenylation of para-hydroxybenzoate (PHB) with an all-trans polyprenyl group. Mediates the second step in the final reaction sequence of ubiquinone-8 (UQ-8) biosynthesis, which is the condensation of the polyisoprenoid side chain with PHB, generating the first membrane-bound Q intermediate 3- octaprenyl-4-hydroxybenzoate K03527 - 1.17.7.4 0.00000000000000000000000000000000000000000000000000000000000000000000000000003748 267.0
DYD1_k127_447096_0 Aminotransferase class-V - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001573 597.0
DYD1_k127_447096_1 Belongs to the peptidase S51 family K13282 - 3.4.15.6 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007889 437.0
DYD1_k127_447096_2 lipolytic protein G-D-S-L family - - - 0.000000000000000000000000000000000000000000000000000000000000000000003022 239.0
DYD1_k127_447096_3 FAD dependent oxidoreductase K09471 - - 0.0000000000000000000002882 96.0
DYD1_k127_4471219_0 PFAM Periplasmic copper-binding protein (NosD) K07218 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001899 545.0
DYD1_k127_4471219_1 nitrous oxide K19341 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001899 319.0
DYD1_k127_4471219_2 ABC-type multidrug transport system ATPase component K19340 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003841 320.0
DYD1_k127_4471628_0 ABC transporter K01990 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002989 326.0
DYD1_k127_4471628_1 Acetyltransferase (GNAT) domain - - - 0.000000000000000000000000000000002436 134.0
DYD1_k127_4471628_2 ABC transporter K01990 - - 0.000000000000000002144 85.0
DYD1_k127_447470_0 SPTR ASPIC UnbV domain protein - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001033 361.0
DYD1_k127_4484117_0 Specifically dimethylates two adjacent adenosines (A1518 and A1519) in the loop of a conserved hairpin near the 3'-end of 16S rRNA in the 30S particle. May play a critical role in biogenesis of 30S subunits K02528 GO:0000154,GO:0000179,GO:0001510,GO:0003674,GO:0003824,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006139,GO:0006364,GO:0006396,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0008168,GO:0008170,GO:0008173,GO:0008649,GO:0008757,GO:0009451,GO:0009987,GO:0010467,GO:0016070,GO:0016072,GO:0016433,GO:0016740,GO:0016741,GO:0022613,GO:0031167,GO:0032259,GO:0034470,GO:0034641,GO:0034660,GO:0042254,GO:0043170,GO:0043412,GO:0043414,GO:0044085,GO:0044237,GO:0044238,GO:0044260,GO:0044424,GO:0044464,GO:0046483,GO:0071704,GO:0071840,GO:0090304,GO:0140098,GO:0140102,GO:1901360 2.1.1.182 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003249 359.0
DYD1_k127_4484117_1 Lysylphosphatidylglycerol synthase TM region K07027 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002225 332.0
DYD1_k127_4484117_2 D-isomer specific 2-hydroxyacid dehydrogenase K00058 - 1.1.1.399,1.1.1.95 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000005972 289.0
DYD1_k127_4484117_3 Nuclease that resolves Holliday junction intermediates in genetic recombination. Cleaves the cruciform structure in supercoiled DNA by nicking to strands with the same polarity at sites symmetrically opposed at the junction in the homologous arms and leaves a 5'-terminal phosphate and a 3'-terminal hydroxyl group K01159 - 3.1.22.4 0.000000000000000000000000000000000000000000000000000000000000000000000001038 250.0
DYD1_k127_4484117_4 Necessary for efficient RNA polymerase transcription elongation past template-encoded arresting sites. The arresting sites in DNA have the property of trapping a certain fraction of elongating RNA polymerases that pass through, resulting in locked ternary complexes. Cleavage of the nascent transcript by cleavage factors such as GreA or GreB allows the resumption of elongation from the new 3'terminus. GreA releases sequences of 2 to 3 nucleotides K03624 - - 0.0000000000000000000000000000000000000000000000000000000000000002578 224.0
DYD1_k127_4484117_5 COG0537 Diadenosine tetraphosphate (Ap4A) hydrolase and other HIT family K02503 - - 0.0000000000000000000000000000000000000000000000000000000000000434 216.0
DYD1_k127_4484117_6 beta-lactamase - - - 0.000000000000000000000000000000000000000000000000000000000007374 209.0
DYD1_k127_4484117_7 Pkd domain containing protein - - - 0.00000000000000000000000000000000000000000000001524 191.0
DYD1_k127_4484117_8 D-isomer specific 2-hydroxyacid dehydrogenase K00058 - 1.1.1.399,1.1.1.95 0.0000000000000000000000000006725 114.0
DYD1_k127_449005_0 COGs COG1914 Mn2 and Fe2 transporter of the NRAMP family - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009406 423.0
DYD1_k127_449005_1 Belongs to the UPF0271 (lamB) family K07160 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000006381 293.0
DYD1_k127_449005_2 PFAM Allophanate hydrolase subunit 2 K06350 - - 0.000000000000000000000000000000000000000000003583 168.0
DYD1_k127_4492782_0 A type II topoisomerase that negatively supercoils closed circular double-stranded (ds) DNA in an ATP-dependent manner to modulate DNA topology and maintain chromosomes in an underwound state. Negative supercoiling favors strand separation, and DNA replication, transcription, recombination and repair, all of which involve strand separation. Also able to catalyze the interconversion of other topological isomers of dsDNA rings, including catenanes and knotted rings. Type II topoisomerases break and join 2 DNA strands simultaneously in an ATP-dependent manner K02469 - 5.99.1.3 0.0 1212.0
DYD1_k127_4493112_0 PFAM Glycosyl transferase, group 1 - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004693 558.0
DYD1_k127_4493112_1 glycosyl transferase family 2 - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003448 434.0
DYD1_k127_4493112_2 GHMP kinases N terminal domain K07031 - 2.7.1.168 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001645 373.0
DYD1_k127_4493112_3 PIN domain - - - 0.00000000000000000000000000000202 124.0
DYD1_k127_4496977_0 Subtilase family - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002854 534.0
DYD1_k127_4496977_1 His Kinase A (phosphoacceptor) domain - - - 0.0000000003749 62.0
DYD1_k127_4497118_0 ribonuclease, Rne Rng family K08301 - - 3.396e-281 872.0
DYD1_k127_4497118_1 TIGRFAM A G-specific adenine glycosylase K03575 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000987 418.0
DYD1_k127_4497118_2 Transporter associated domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001012 413.0
DYD1_k127_4497118_3 Tetratricopeptide repeat - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000001296 298.0
DYD1_k127_4497118_4 Single-stranded DNA-binding protein K03111 - - 0.0000000000000000000000000000000000000000000000000000000000000000002247 231.0
DYD1_k127_4497118_5 PFAM Peptidase, membrane zinc metallopeptidase K06973 - - 0.000000000000000000000000000000000000000000000000000000000005899 210.0
DYD1_k127_4497118_6 Belongs to the bacterial histone-like protein family K03530 - - 0.00000000000000000000000000000000000000000000000000000832 192.0
DYD1_k127_4497118_7 - - - - 0.00000288 49.0
DYD1_k127_4499428_0 Forms oxaloacetate, a four-carbon dicarboxylic acid source for the tricarboxylic acid cycle K01595 - 4.1.1.31 0.0 1178.0
DYD1_k127_4499428_1 acetyl-CoA hydrolase - - - 4.266e-215 674.0
DYD1_k127_4499428_2 DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates K03040 GO:0003674,GO:0003824,GO:0003899,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006139,GO:0006351,GO:0006354,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0016070,GO:0016740,GO:0016772,GO:0016779,GO:0018130,GO:0019438,GO:0032774,GO:0034062,GO:0034641,GO:0034645,GO:0034654,GO:0043170,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044271,GO:0044424,GO:0044464,GO:0046483,GO:0071704,GO:0090304,GO:0097659,GO:0097747,GO:0140098,GO:1901360,GO:1901362,GO:1901576 2.7.7.6 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009538 604.0
DYD1_k127_4499428_3 Belongs to the CarA family K01956 - 6.3.5.5 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003726 601.0
DYD1_k127_4499428_4 One of the primary rRNA binding proteins, it binds directly to 16S rRNA where it nucleates assembly of the body of the 30S subunit K02986 GO:0003674,GO:0003676,GO:0003723,GO:0003735,GO:0005198,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005840,GO:0006417,GO:0006450,GO:0008150,GO:0009889,GO:0009891,GO:0009893,GO:0010468,GO:0010556,GO:0010557,GO:0010604,GO:0010608,GO:0010628,GO:0015935,GO:0019222,GO:0019843,GO:0031323,GO:0031325,GO:0031326,GO:0031328,GO:0032268,GO:0032270,GO:0032991,GO:0034248,GO:0034250,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044446,GO:0044464,GO:0045727,GO:0045903,GO:0048518,GO:0048522,GO:0050789,GO:0050794,GO:0051171,GO:0051173,GO:0051246,GO:0051247,GO:0060255,GO:0065007,GO:0065008,GO:0080090,GO:0097159,GO:1901363,GO:1990904,GO:2000112 - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001166 356.0
DYD1_k127_4499428_5 Sortilin, neurotensin receptor 3, - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000001869 260.0
DYD1_k127_4499428_6 Catalyzes a trans-dehydration via an enolate intermediate K03786 - 4.2.1.10 0.0000000000000000000000000000000000000000000000000000000000000005267 222.0
DYD1_k127_4499428_7 Ribosomal protein L17 K02879 GO:0003674,GO:0003735,GO:0005198,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0015934,GO:0022625,GO:0022626,GO:0032991,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:1990904 - 0.0000000000000000000000000000000000000000000000000000000000000006641 222.0
DYD1_k127_4499428_8 response regulator, receiver - - - 0.000000000000000000000000000000000000000000000000000004068 196.0
DYD1_k127_4499428_9 Located on the platform of the 30S subunit, it bridges several disparate RNA helices of the 16S rRNA. Forms part of the Shine-Dalgarno cleft in the 70S ribosome K02948 GO:0000028,GO:0000462,GO:0003674,GO:0003676,GO:0003723,GO:0003729,GO:0003735,GO:0005198,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0006139,GO:0006364,GO:0006396,GO:0006412,GO:0006518,GO:0006725,GO:0006807,GO:0006996,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0015935,GO:0016043,GO:0016070,GO:0016072,GO:0019538,GO:0019843,GO:0022607,GO:0022613,GO:0022618,GO:0022626,GO:0022627,GO:0030490,GO:0032991,GO:0034470,GO:0034622,GO:0034641,GO:0034645,GO:0034660,GO:0042254,GO:0042255,GO:0042274,GO:0043043,GO:0043170,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043603,GO:0043604,GO:0043933,GO:0044085,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:0046483,GO:0048027,GO:0065003,GO:0070181,GO:0070925,GO:0071704,GO:0071826,GO:0071840,GO:0090304,GO:0097159,GO:1901360,GO:1901363,GO:1901564,GO:1901566,GO:1901576,GO:1990904 - 0.000000000000000004763 83.0
DYD1_k127_4511114_0 Motility related/secretion protein - - - 6.267e-242 769.0
DYD1_k127_4513426_0 PFAM Peptidase M1 membrane alanine aminopeptidase K01256 - 3.4.11.2 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001828 468.0
DYD1_k127_4513426_1 Short-chain dehydrogenase reductase SDR - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001191 354.0
DYD1_k127_4515376_0 ATP-dependent DNA helicase RecQ K03654 - 3.6.4.12 3.227e-270 845.0
DYD1_k127_4515376_1 ATPase, P-type, K Mg Cd Cu Zn Na Ca Na H-transporter K17686 - 3.6.3.54 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002498 301.0
DYD1_k127_4515376_2 PFAM Chaperonin Cpn10 - - - 0.0000000000000000000000000005853 113.0
DYD1_k127_4515376_3 - - - - 0.000000763 55.0
DYD1_k127_4519091_0 Outer membrane protein beta-barrel family - - - 2.406e-240 763.0
DYD1_k127_4522766_0 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007964 444.0
DYD1_k127_4522766_1 Histidine kinase - - - 0.0000000000001922 82.0
DYD1_k127_4532595_0 Male sterility protein K12454 - 5.1.3.10 0.00000000000000000000000000000000001959 137.0
DYD1_k127_4532595_1 Methyltransferase domain - - - 0.000000000004582 76.0
DYD1_k127_4533258_0 Catalyzes the reversible formation of acyl-phosphate (acyl-PO(4)) from acyl- acyl-carrier-protein (acyl-ACP). This enzyme utilizes acyl-ACP as fatty acyl donor, but not acyl-CoA K03621 - 2.3.1.15 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002805 443.0
DYD1_k127_4533258_1 Protein of unknown function (DUF3810) - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000003542 284.0
DYD1_k127_4533258_2 acr, cog1399 - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000007149 266.0
DYD1_k127_4533258_3 Belongs to the bacterial ribosomal protein bL32 family K02911 - - 0.000000000000000000000000006271 110.0
DYD1_k127_4533258_4 - - - - 0.0000000000005964 75.0
DYD1_k127_4536943_0 Succinyl-CoA synthetase functions in the citric acid cycle (TCA), coupling the hydrolysis of succinyl-CoA to the synthesis of either ATP or GTP and thus represents the only step of substrate-level phosphorylation in the TCA. The alpha subunit of the enzyme binds the substrates coenzyme A and phosphate, while succinate binding and nucleotide specificity is provided by the beta subunit K01902 - 6.2.1.5 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003807 501.0
DYD1_k127_4536943_1 Alpha-2-macroglobulin family - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002268 493.0
DYD1_k127_4536943_2 ABC transporter K02065 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003314 417.0
DYD1_k127_4536943_3 ABC-type transport system involved in resistance to organic solvents permease component K02066 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005556 372.0
DYD1_k127_4536943_4 malic enzyme K00027,K00029 - 1.1.1.38,1.1.1.40 0.00000000000000000000000000000000000000000006003 162.0
DYD1_k127_4536943_5 Domain of unknown function (DUF4198) - - - 0.000000000000000000000000000000000000008813 155.0
DYD1_k127_4536943_6 Domain of unknown function (DUF4476) - - - 0.00000000000001257 84.0
DYD1_k127_4541583_0 Polyphosphate nucleotide phosphotransferase, PPK2 family - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009814 366.0
DYD1_k127_4541583_1 Responsible for the release of ribosomes from messenger RNA at the termination of protein biosynthesis. May increase the efficiency of translation by recycling ribosomes from one round of translation to another K02838 GO:0002181,GO:0002184,GO:0003674,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006412,GO:0006415,GO:0006518,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0016043,GO:0019538,GO:0022411,GO:0032984,GO:0034641,GO:0034645,GO:0043021,GO:0043023,GO:0043043,GO:0043170,GO:0043603,GO:0043604,GO:0043624,GO:0043933,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044424,GO:0044464,GO:0044877,GO:0071704,GO:0071840,GO:1901564,GO:1901566,GO:1901576 - 0.000000000000000000000000000000000000000000000000000000000000000000000001837 246.0
DYD1_k127_4541583_2 EamA-like transporter family - - - 0.00000000000000000000000000000000000000000000000000000000000000000005902 241.0
DYD1_k127_4541583_3 Channel that opens in response to stretch forces in the membrane lipid bilayer. May participate in the regulation of osmotic pressure changes within the cell K03282 - - 0.0000000000000000000000000000000000000006704 151.0
DYD1_k127_4544359_0 PFAM type I phosphodiesterase nucleotide pyrophosphatase - - - 1.556e-217 687.0
DYD1_k127_4544359_1 Family of unknown function (DUF1028) - - - 0.00000008585 54.0
DYD1_k127_4548596_0 with chaperone activity ATP-binding subunit K03696 - - 1.621e-295 910.0
DYD1_k127_4548616_0 DNA helicase K03657 - 3.6.4.12 0.0 1031.0
DYD1_k127_4548616_1 Oligoendopeptidase F K08602 - - 4.703e-206 646.0
DYD1_k127_4548616_2 PFAM Glycosyl hydrolases family 25 K07273 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002182 316.0
DYD1_k127_4548616_3 protein SCO1 SenC PrrC involved in biogenesis of respiratory and photosynthetic systems K07152 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000001973 255.0
DYD1_k127_4548616_5 Belongs to the Fur family K03711 - - 0.0000000000000000000000000000000000000000000000000000000001744 206.0
DYD1_k127_4548616_6 Domain of unknown function (DUF4440) - - - 0.0000000000000000000000000000000000000000000000000005773 187.0
DYD1_k127_4548616_7 MerC mercury resistance protein - - - 0.00000000000000000000000000000000000000000000000005683 180.0
DYD1_k127_4548616_8 - - - - 0.0000000000001058 75.0
DYD1_k127_4549684_0 Large extracellular alpha-helical protein - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007188 377.0
DYD1_k127_4549684_1 Protein of unknown function (DUF541) K09807 - - 0.000000000000000000000000000000000000000000000005963 180.0
DYD1_k127_4549684_2 transport - - - 0.000000000000000000000000001524 116.0
DYD1_k127_4558573_0 Belongs to the aldehyde dehydrogenase family K00294,K13821 - 1.2.1.88,1.5.5.2 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007474 387.0
DYD1_k127_4558573_1 Peptide chain release factor 2 directs the termination of translation in response to the peptide chain termination codons UGA and UAA K02836 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000002191 248.0
DYD1_k127_456273_0 Catalyzes the dehydration of D-mannonate K01686 GO:0003674,GO:0003824,GO:0005488,GO:0005506,GO:0005975,GO:0005996,GO:0006063,GO:0006064,GO:0006082,GO:0008150,GO:0008152,GO:0008198,GO:0008927,GO:0009056,GO:0009987,GO:0016052,GO:0016054,GO:0016829,GO:0016835,GO:0016836,GO:0019585,GO:0019752,GO:0030145,GO:0032787,GO:0042839,GO:0042840,GO:0043167,GO:0043169,GO:0043436,GO:0044237,GO:0044238,GO:0044248,GO:0044281,GO:0044282,GO:0046365,GO:0046395,GO:0046872,GO:0046914,GO:0071704,GO:0072329,GO:1901575 4.2.1.8 0.00000000000000000000000000000000000002433 144.0
DYD1_k127_456273_1 Catalyzes the dehydration of D-mannonate K01686 GO:0003674,GO:0003824,GO:0005488,GO:0005506,GO:0005975,GO:0005996,GO:0006063,GO:0006064,GO:0006082,GO:0008150,GO:0008152,GO:0008198,GO:0008927,GO:0009056,GO:0009987,GO:0016052,GO:0016054,GO:0016829,GO:0016835,GO:0016836,GO:0019585,GO:0019752,GO:0030145,GO:0032787,GO:0042839,GO:0042840,GO:0043167,GO:0043169,GO:0043436,GO:0044237,GO:0044238,GO:0044248,GO:0044281,GO:0044282,GO:0046365,GO:0046395,GO:0046872,GO:0046914,GO:0071704,GO:0072329,GO:1901575 4.2.1.8 0.0000002493 54.0
DYD1_k127_456273_2 Domain of unknown function (DUF4476) - - - 0.000002183 59.0
DYD1_k127_4572282_0 Fatty acid desaturase K00507 - 1.14.19.1 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001759 492.0
DYD1_k127_4572282_1 Cupin 2, conserved barrel domain protein - - - 0.000001045 55.0
DYD1_k127_4574075_0 NfeD-like C-terminal, partner-binding K07403 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007679 511.0
DYD1_k127_4574075_1 PFAM SPFH domain Band 7 family - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001079 403.0
DYD1_k127_4574075_2 single-stranded DNA-binding protein K03111 - - 0.000000000000000000000000000000000000000000001262 167.0
DYD1_k127_4574075_3 - - - - 0.0000000000000000000000000000000000005311 143.0
DYD1_k127_4584675_0 PFAM sulfatase - - - 8.191e-279 871.0
DYD1_k127_4584675_1 COGs COG1253 Hemolysins and related protein containing CBS domains K03699 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003571 463.0
DYD1_k127_4584675_2 Thiopurine S-methyltransferase (TPMT) - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000001571 279.0
DYD1_k127_4593312_0 FAD linked oxidase domain protein - - - 5.592e-235 741.0
DYD1_k127_4593312_1 peptidyl-tyrosine sulfation - - - 0.00000000000000006178 85.0
DYD1_k127_4608803_0 Involved in the tonB-independent uptake of proteins K03641 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005049 580.0
DYD1_k127_4608803_1 Metallo-peptidase family M12 - - - 0.00000000000000000000000000000000000000000000000000000000000000000007617 236.0
DYD1_k127_4608803_2 peptidyl-tyrosine sulfation - - - 0.00000000000000000000000001717 119.0
DYD1_k127_4621091_0 Sodium:solute symporter family K03307 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005955 472.0
DYD1_k127_4621091_1 Catalyzes the dehydration of D-mannonate K01686 GO:0003674,GO:0003824,GO:0005488,GO:0005506,GO:0005975,GO:0005996,GO:0006063,GO:0006064,GO:0006082,GO:0008150,GO:0008152,GO:0008198,GO:0008927,GO:0009056,GO:0009987,GO:0016052,GO:0016054,GO:0016829,GO:0016835,GO:0016836,GO:0019585,GO:0019752,GO:0030145,GO:0032787,GO:0042839,GO:0042840,GO:0043167,GO:0043169,GO:0043436,GO:0044237,GO:0044238,GO:0044248,GO:0044281,GO:0044282,GO:0046365,GO:0046395,GO:0046872,GO:0046914,GO:0071704,GO:0072329,GO:1901575 4.2.1.8 0.0000000000000000000000000000000000000004828 149.0
DYD1_k127_4625392_0 Psort location Cytoplasmic, score 8.96 - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008263 351.0
DYD1_k127_4625392_1 L,D-transpeptidase catalytic domain K21470 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000009318 271.0
DYD1_k127_4639522_0 Carboxypeptidase regulatory-like domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002677 377.0
DYD1_k127_4639522_1 Tetratricopeptide repeat - - - 0.00000000000000000000000000000000000000000000001211 178.0
DYD1_k127_4639522_2 Psort location CytoplasmicMembrane, score - - - 0.00000000000000000001469 97.0
DYD1_k127_464219_0 2-methylthioadenine synthetase K18707 - 2.8.4.5 5.252e-218 682.0
DYD1_k127_464219_1 Phosphate acyltransferases K00655 - 2.3.1.51 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006196 328.0
DYD1_k127_464219_2 Involved in the restart of stalled replication forks. Recognizes and binds the arrested nascent DNA chain at stalled replication forks. It can open the DNA duplex, via its helicase activity, and promote assembly of the primosome and loading of the major replicative helicase DnaB onto DNA K04066 - - 0.000000000000000000000000000000000008333 139.0
DYD1_k127_464219_3 PFAM FGGY family of carbohydrate kinases, N-terminal domain K00854 - 2.7.1.17 0.000000000000000016 82.0
DYD1_k127_4659647_0 Catalyzes the conversion of inosine 5'-phosphate (IMP) to xanthosine 5'-phosphate (XMP), the first committed and rate- limiting step in the de novo synthesis of guanine nucleotides, and therefore plays an important role in the regulation of cell growth K00088 - 1.1.1.205 4.936e-250 779.0
DYD1_k127_4659647_1 Fungalysin metallopeptidase (M36) - - - 0.00000000000000000000000000000000000000000000000000000000000000000000001846 270.0
DYD1_k127_4659647_2 Repeats in polycystic kidney disease 1 (PKD1) and other proteins - - - 0.00000000000000000001308 108.0
DYD1_k127_4659647_3 Kelch repeat type 1 - - - 0.000004466 60.0
DYD1_k127_466080_0 Catalyzes the conversion of epoxyqueuosine (oQ) to queuosine (Q), which is a hypermodified base found in the wobble positions of tRNA(Asp), tRNA(Asn), tRNA(His) and tRNA(Tyr) K18979 - 1.17.99.6 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002659 487.0
DYD1_k127_466080_1 Protein of unknown function (DUF2911) - - - 0.0000000000000000000000000000000000000000000000000000000007689 205.0
DYD1_k127_466080_2 transport, permease protein K01992 - - 0.0000000000000000000000000000000000008699 139.0
DYD1_k127_466969_0 sugar transferase K03606 - - 0.0000000000000000000000000000000000000000000000000000000000184 214.0
DYD1_k127_466969_1 O-Antigen ligase - - - 0.0000000000000000000000000000000000000000000000000000161 197.0
DYD1_k127_466969_2 COGs COG1132 ABC-type multidrug transport system ATPase and permease components K06148 - - 0.00000000000000000000000000000000000002415 149.0
DYD1_k127_4684017_0 COG2256 ATPase related to the helicase subunit of the Holliday junction resolvase K07478 - - 9.447e-206 648.0
DYD1_k127_4684017_1 Phytanoyl-CoA dioxygenase (PhyH) - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000469 481.0
DYD1_k127_4684017_2 alpha/beta hydrolase fold - - - 0.000000000000000001086 88.0
DYD1_k127_4686726_0 COG1331 Highly conserved protein containing a thioredoxin domain K06888 - - 3.016e-273 857.0
DYD1_k127_4686726_1 COGs COG4775 Outer membrane protein protective antigen OMA87 - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002505 617.0
DYD1_k127_4686726_2 Uroporphyrinogen-III synthase K01719 - 4.2.1.75 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002793 421.0
DYD1_k127_4686726_3 Domain of unknown function (DUF4271) - - - 0.00000000000000000000000000000000000000000000000000000003561 208.0
DYD1_k127_4686726_4 PFAM Formylglycine-generating sulfatase enzyme - - - 0.00000000000000000000000000000000000000000000004326 173.0
DYD1_k127_4689812_0 Na(+)-translocating NADH-quinone reductase subunit A (NQRA) K00346 - 1.6.5.8 2.505e-203 641.0
DYD1_k127_4689812_1 NQR2, RnfD, RnfE family K00347 - 1.6.5.8 1.17e-198 627.0
DYD1_k127_4689812_2 Rnf-Nqr subunit, membrane protein K00349 - 1.6.5.8 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000631 350.0
DYD1_k127_4689812_3 FMN_bind K00348 - 1.6.5.8 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004041 320.0
DYD1_k127_4689812_4 Rnf-Nqr subunit, membrane protein K00350 - 1.6.5.8 0.0000000000000000000000000000000000000000000000000000000000000000000000000002669 258.0
DYD1_k127_4689812_5 Domain in cystathionine beta-synthase and other proteins. - - - 0.0008007 44.0
DYD1_k127_469820_0 Transporter associated domain K03699 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000005248 269.0
DYD1_k127_469820_1 Essential for recycling GMP and indirectly, cGMP K00942 GO:0003674,GO:0003824,GO:0004385,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006139,GO:0006163,GO:0006725,GO:0006753,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009116,GO:0009117,GO:0009119,GO:0009123,GO:0009126,GO:0009132,GO:0009135,GO:0009150,GO:0009161,GO:0009165,GO:0009167,GO:0009179,GO:0009185,GO:0009259,GO:0009987,GO:0016301,GO:0016310,GO:0016740,GO:0016772,GO:0016776,GO:0018130,GO:0019205,GO:0019438,GO:0019637,GO:0019693,GO:0034641,GO:0034654,GO:0042278,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0044424,GO:0044444,GO:0044464,GO:0046037,GO:0046128,GO:0046483,GO:0046710,GO:0046940,GO:0050145,GO:0055086,GO:0071704,GO:0072521,GO:0090407,GO:1901068,GO:1901135,GO:1901293,GO:1901360,GO:1901362,GO:1901564,GO:1901576,GO:1901657 2.7.4.8 0.0000000000000000000000000000000000000000000000000000000000000000000000000003289 259.0
DYD1_k127_469820_2 Amino acid permease K03294 - - 0.000000000000000000000000000000000000000000000000002287 188.0
DYD1_k127_4708187_0 Esterase of the alpha-beta hydrolase superfamily - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003592 542.0
DYD1_k127_4708187_1 Diacylglycerol kinase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001073 359.0
DYD1_k127_4708187_2 Phosphoesterase PA-phosphatase related K19302 - 3.6.1.27 0.000000000000002274 79.0
DYD1_k127_4712263_0 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004973 486.0
DYD1_k127_4712263_1 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000003571 263.0
DYD1_k127_4712263_2 Methylates the class 1 translation termination release factors RF1 PrfA and RF2 PrfB on the glutamine residue of the universally conserved GGQ motif K02493 GO:0003674,GO:0003824,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0008150,GO:0008152,GO:0008168,GO:0008757,GO:0016740,GO:0016741,GO:0032259,GO:0044424,GO:0044444,GO:0044464 2.1.1.297 0.0004171 51.0
DYD1_k127_4721923_0 Protein of unknown function (DUF5131) - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004857 394.0
DYD1_k127_4721923_1 tRNA-splicing ligase RtcB K14415 - 6.5.1.3 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000002606 280.0
DYD1_k127_4721923_2 - - - - 0.0000000001101 63.0
DYD1_k127_4721923_3 META domain K03668 - - 0.00000004274 61.0
DYD1_k127_4725853_0 Beta-lactamase enzyme family - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003753 429.0
DYD1_k127_4725853_1 PFAM Aminotransferase class I and II K00812 - 2.6.1.1 0.0000000000000000000000000000000000000000000000000000009605 193.0
DYD1_k127_4725853_2 Part of the Sec protein translocase complex. Interacts with the SecYEG preprotein conducting channel. SecDF uses the proton motive force (PMF) to complete protein translocation after the ATP-dependent function of SecA K03072,K12257 - - 0.000000000000000005013 83.0
DYD1_k127_474976_0 Histidine kinase - - - 0.00000000000000000000000000000000000000000000000005637 198.0
DYD1_k127_474976_1 chemotaxis protein K03406,K13487 - - 0.0000000000000009342 91.0
DYD1_k127_475372_0 COGs COG0265 Trypsin-like serine protease typically periplasmic contain C-terminal PDZ domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001432 537.0
DYD1_k127_475372_1 acyl-CoA reductase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004311 436.0
DYD1_k127_475372_2 4Fe-4S binding domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000115 233.0
DYD1_k127_4754794_0 Outer membrane protein protective antigen OMA87 - - - 1.581e-255 807.0
DYD1_k127_4756910_0 Amino acid permease K03294 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002172 319.0
DYD1_k127_4756910_1 PFAM LysE type translocator - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007123 306.0
DYD1_k127_4756910_2 Pfam SNARE associated Golgi protein - - - 0.00000000000000000000000000305 111.0
DYD1_k127_4758620_0 Catalyzes the ATP-dependent amination of UTP to CTP with either L-glutamine or ammonia as the source of nitrogen. Regulates intracellular CTP levels through interactions with the four ribonucleotide triphosphates K01937 - 6.3.4.2 5.584e-301 927.0
DYD1_k127_4758620_1 Required for the insertion and or proper folding and or complex formation of integral membrane proteins into the membrane. Involved in integration of membrane proteins that insert both dependently and independently of the Sec translocase complex, as well as at least some lipoproteins. Aids folding of multispanning membrane proteins K03217 - - 1.484e-253 797.0
DYD1_k127_4758620_2 - - - - 0.00000000000000000004766 93.0
DYD1_k127_4760845_0 protein conserved in bacteria (DUF2179) - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001725 522.0
DYD1_k127_4760845_1 Histidine kinase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009577 385.0
DYD1_k127_4760845_2 response regulator, receiver K02477 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004753 346.0
DYD1_k127_4760845_3 membrane protein (DUF2154) - - - 0.00000000000000000000000000000000000000000000000000000000000000000001167 241.0
DYD1_k127_4760845_4 Domain of unknown function (DUF4288) - - - 0.000000000000000000000000000000000000001509 150.0
DYD1_k127_4770465_0 Oligoendopeptidase F K08602 - - 0.00000000000000000000000000000000000000000000000000000000000000009914 224.0
DYD1_k127_4770465_1 - - - - 0.00000000000000000000000000000000000000000000000001833 184.0
DYD1_k127_4779801_0 Penicillin-binding Protein K05367 - 2.4.1.129 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004519 308.0
DYD1_k127_4779801_1 Plasmid stabilization system - - - 0.00000000000002991 76.0
DYD1_k127_4779801_2 Penicillin-binding Protein K05367 - 2.4.1.129 0.00000006132 53.0
DYD1_k127_4792954_0 alginic acid biosynthetic process - - - 2.753e-194 629.0
DYD1_k127_4792954_1 Lactonase, 7-bladed beta-propeller - - - 0.000000000000000000000000000000000000000000000000000000000000000005888 239.0
DYD1_k127_4792954_2 Domain of unknown function (DUF4382) - - - 0.00000000000000000005997 92.0
DYD1_k127_4792954_3 domain, Protein - - - 0.0001651 44.0
DYD1_k127_4803717_0 Fe-S oxidoreductase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001453 452.0
DYD1_k127_4803717_1 Pfam SNARE associated Golgi protein - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002491 412.0
DYD1_k127_4803717_2 Catalyzes the methylthiolation of N6- (dimethylallyl)adenosine (i(6)A), leading to the formation of 2- methylthio-N6-(dimethylallyl)adenosine (ms(2)i(6)A) at position 37 in tRNAs that read codons beginning with uridine K06168 - 2.8.4.3 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001854 404.0
DYD1_k127_4803717_3 - - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000001255 254.0
DYD1_k127_4804824_0 Ribose-phosphate pyrophosphokinase K00948 - 2.7.6.1 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009896 519.0
DYD1_k127_4804824_1 Belongs to the UPF0758 family K03630 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001429 314.0
DYD1_k127_4804824_2 Protein of unknown function (DUF3467) - - - 0.00000000000000000000000000000000000000003828 152.0
DYD1_k127_4806786_0 Belongs to the NAD(P)-dependent epimerase dehydratase family. dTDP-glucose dehydratase subfamily K01710 - 4.2.1.46 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004295 561.0
DYD1_k127_4806786_1 NAD dependent epimerase dehydratase family K01784,K02473 - 5.1.3.2,5.1.3.7 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002213 455.0
DYD1_k127_4806786_2 Chain length determinant protein - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008739 329.0
DYD1_k127_4811269_0 Oxidoreductase FAD-binding domain K00523,K05784 - 1.17.1.1 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001557 332.0
DYD1_k127_4811269_1 Pkd domain containing protein - - - 0.0000000000000000000000000000000000000000000000000000000000000004348 239.0
DYD1_k127_48241_0 Cystathionine beta-synthase K01697 - 4.2.1.22 3.232e-253 789.0
DYD1_k127_4851709_0 PFAM Methyltransferase type 12 - - - 0.00000000000000000000000000000000000000000000000000000000002964 210.0
DYD1_k127_4851709_1 receptor - - - 0.00000000000000000000000000000002139 128.0
DYD1_k127_4851709_2 - - - - 0.000000000003113 76.0
DYD1_k127_4869259_0 Protein of unknown function (DUF3078) - - - 0.00000000000000000000000000000000000000000000000000000001242 204.0
DYD1_k127_4869259_1 Histidine kinase - - - 0.000000000000000000000005519 109.0
DYD1_k127_487182_0 Catalyzes the hydrolysis of inorganic pyrophosphate (PPi) forming two phosphate ions K01507 - 3.6.1.1 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000001663 283.0
DYD1_k127_487182_1 Sulfite exporter TauE/SafE K07090 - - 0.0000000000000000005994 89.0
DYD1_k127_4884853_0 WD domain, G-beta repeat - - - 0.000000000000000000000000000000000000000000000000000000000000003297 249.0
DYD1_k127_4893475_0 polysaccharide catabolic process K03478 - 3.5.1.105 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000007588 297.0
DYD1_k127_493404_0 Catalyzes the condensation reaction of fatty acid synthesis by the addition to an acyl acceptor of two carbons from malonyl-ACP. Catalyzes the first condensation reaction which initiates fatty acid synthesis and may therefore play a role in governing the total rate of fatty acid production. Possesses both acetoacetyl-ACP synthase and acetyl transacylase activities. Its substrate specificity determines the biosynthesis of branched- chain and or straight-chain of fatty acids K00648 - 2.3.1.180 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005136 588.0
DYD1_k127_493404_1 AI-2E family transporter - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001918 381.0
DYD1_k127_4934131_0 PAP2 superfamily - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007169 486.0
DYD1_k127_4946276_0 NADPH-dependent FMN reductase K19784 - - 0.00000000000000000000000000000000000000000000000000000000000000004459 228.0
DYD1_k127_4946276_1 - - - - 0.000000000000000005858 83.0
DYD1_k127_4946276_2 Domain in cystathionine beta-synthase and other proteins. - - - 0.0000000000002271 77.0
DYD1_k127_495262_0 Methionine aminopeptidase K01265 - 3.4.11.18 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004355 322.0
DYD1_k127_495262_1 Protein of unknown function (DUF4256) - - - 0.000000000000000000000000000000000000000000000000000000000000005455 217.0
DYD1_k127_495262_2 Uncharacterized protein conserved in bacteria (DUF2200) - - - 0.00000000000000000000000000000000000000000000000000000000001103 207.0
DYD1_k127_4973994_0 phosphoesterase RecJ domain protein K06881 - 3.1.13.3,3.1.3.7 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002474 479.0
DYD1_k127_4973994_1 Catalyzes the condensation of para-aminobenzoate (pABA) with 6-hydroxymethyl-7,8-dihydropterin diphosphate (DHPt-PP) to form 7,8-dihydropteroate (H2Pte), the immediate precursor of folate derivatives K00796 - 2.5.1.15 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001509 324.0
DYD1_k127_4973994_2 FKBP-type peptidyl-prolyl cis-trans isomerase - - - 0.00000000000000000000000000000000224 141.0
DYD1_k127_4973994_3 Major role in the synthesis of nucleoside triphosphates other than ATP. The ATP gamma phosphate is transferred to the NDP beta phosphate via a ping-pong mechanism, using a phosphorylated active-site intermediate K00940 - 2.7.4.6 0.00000000000000000000000000000003317 126.0
DYD1_k127_4976255_0 pathogenesis - - - 0.00000000000000000000000000000000000000000002437 174.0
DYD1_k127_4976255_1 leucine binding - - - 0.000000000000000000000000000000006358 131.0
DYD1_k127_4980318_0 Dienelactone hydrolase family K01061 - 3.1.1.45 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000984 405.0
DYD1_k127_4980318_1 regulation of DNA-templated transcription, elongation - - - 0.0000000000000000000000000000000000000000000001478 169.0
DYD1_k127_4980318_2 Domain of unknown function (DUF4399) - - - 0.000000000000000000000000000000000000000001159 162.0
DYD1_k127_4980426_0 Involved in the biosynthesis of porphyrin-containing compound - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008931 437.0
DYD1_k127_4980578_0 His Kinase A (phospho-acceptor) domain - - - 0.000000000000000000000000000000000000000000000000000000000006203 223.0
DYD1_k127_4981402_0 ATPase (AAA - - - 2.527e-202 636.0
DYD1_k127_4981402_1 Functions as a peptidoglycan terminase that cleaves nascent peptidoglycan strands endolytically to terminate their elongation K07082 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003006 351.0
DYD1_k127_4981402_2 Catalyzes the methylthiolation of N6- (dimethylallyl)adenosine (i(6)A), leading to the formation of 2- methylthio-N6-(dimethylallyl)adenosine (ms(2)i(6)A) at position 37 in tRNAs that read codons beginning with uridine K06168 - 2.8.4.3 0.000000000000000000000000000000000000000000000000000000000000000000000000000000001233 274.0
DYD1_k127_4981402_3 Lipopolysaccharide-assembly - - - 0.00000000000000000000000000000000000000000000000000002443 192.0
DYD1_k127_4981402_4 - - - - 0.0000000000000000000000000000000000000000003307 167.0
DYD1_k127_4981402_5 P-P-bond-hydrolysis-driven protein transmembrane transporter activity K03075 GO:0003674,GO:0005215,GO:0005575,GO:0005623,GO:0005886,GO:0006605,GO:0006612,GO:0006613,GO:0006614,GO:0006616,GO:0006810,GO:0006886,GO:0008104,GO:0008150,GO:0008320,GO:0008565,GO:0009987,GO:0015031,GO:0015833,GO:0016020,GO:0016043,GO:0022857,GO:0022884,GO:0031522,GO:0032978,GO:0032991,GO:0033036,GO:0033365,GO:0034613,GO:0042886,GO:0042887,GO:0043952,GO:0044464,GO:0045047,GO:0045184,GO:0046907,GO:0051179,GO:0051205,GO:0051234,GO:0051641,GO:0051649,GO:0055085,GO:0061024,GO:0065002,GO:0070727,GO:0070972,GO:0071702,GO:0071705,GO:0071806,GO:0071840,GO:0071944,GO:0072594,GO:0072599,GO:0072657,GO:0090150,GO:1904680 - 0.0000000000000000000000000001049 118.0
DYD1_k127_4981402_6 ribonuclease BN K07058 - - 0.000000000000000000008631 93.0
DYD1_k127_5009466_0 The pyruvate dehydrogenase complex catalyzes the overall conversion of pyruvate to acetyl-CoA and CO(2) K00161 - 1.2.4.1 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001697 550.0
DYD1_k127_5009466_1 Tetratricopeptide repeat - - - 0.0000000000000000000000000000000000000000000000001183 182.0
DYD1_k127_502803_0 Proline dehydrogenase K00318 - - 0.00000000000000000000000000000000000000000000009341 169.0
DYD1_k127_502803_1 Catalyzes the reductive methylation of 2'-deoxyuridine- 5'-monophosphate (dUMP) to 2'-deoxythymidine-5'-monophosphate (dTMP) while utilizing 5,10-methylenetetrahydrofolate (mTHF) as the methyl donor and reductant in the reaction, yielding dihydrofolate (DHF) as a by-product. This enzymatic reaction provides an intracellular de novo source of dTMP, an essential precursor for DNA biosynthesis K00560 - 2.1.1.45 0.000000000000000000000000000000000000000002448 155.0
DYD1_k127_502803_2 - - - - 0.0000000000007082 74.0
DYD1_k127_5041559_0 Cytochrome C and Quinol oxidase polypeptide I K04561 - 1.7.2.5 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005841 379.0
DYD1_k127_5041559_1 Di-iron-containing protein involved in the repair of iron-sulfur clusters K07322 - - 0.000000000000000000000000000000000000000000000000000000000009479 215.0
DYD1_k127_5041559_2 Cytochrome C oxidase, cbb3-type, subunit III K02305 - - 0.000000000000000000000004219 105.0
DYD1_k127_5066307_0 Dipeptidyl peptidase IV (DPP IV) N-terminal region K01278 - 3.4.14.5 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003541 605.0
DYD1_k127_5066307_1 Flavin prenyltransferase that catalyzes the synthesis of the prenylated FMN cofactor (prenyl-FMN) for 4-hydroxy-3- polyprenylbenzoic acid decarboxylase UbiD. The prenyltransferase is metal-independent and links a dimethylallyl moiety from dimethylallyl monophosphate (DMAP) to the flavin N5 and C6 atoms of FMN K03186 - 2.5.1.129 0.00000000000000000000000000000000000000000000000000000000000000000000000000005881 260.0
DYD1_k127_5083305_0 Belongs to the D-alanine--D-alanine ligase family K01921 - 6.3.2.4 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001983 467.0
DYD1_k127_5083305_1 PASTA domain containing protein K01921,K08884,K12132 - 2.7.11.1,6.3.2.4 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000285 282.0
DYD1_k127_5083305_2 Rhodanese Homology Domain - - - 0.00000000000000000000000000000000000000000009347 161.0
DYD1_k127_5083305_3 ketosteroid isomerase - - - 0.00000000000000000000000973 105.0
DYD1_k127_5088396_0 Belongs to the phenylalanyl-tRNA synthetase beta subunit family. Type 1 subfamily K01890 GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006082,GO:0006139,GO:0006399,GO:0006412,GO:0006418,GO:0006432,GO:0006518,GO:0006520,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009328,GO:0009987,GO:0010467,GO:0016070,GO:0019538,GO:0019752,GO:0032991,GO:0034641,GO:0034645,GO:0034660,GO:0043038,GO:0043039,GO:0043043,GO:0043170,GO:0043436,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044281,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0071704,GO:0090304,GO:1901360,GO:1901564,GO:1901566,GO:1901576,GO:1902494 6.1.1.20 6.736e-206 646.0
DYD1_k127_5088396_1 PFAM 3-Oxoacyl- acyl-carrier-protein (ACP) synthase III K00648 - 2.3.1.180 0.0000000000000000000000000000000000000000000000000000000000000000000000001111 250.0
DYD1_k127_5093278_0 PFAM Bacterial regulatory helix-turn-helix proteins, AraC family - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004686 308.0
DYD1_k127_5093278_1 Part of the outer membrane protein assembly complex, which is involved in assembly and insertion of beta-barrel proteins into the outer membrane - - - 0.00000000000000000000000000000000000000000000000002563 185.0
DYD1_k127_5093278_2 - - - - 0.000000000000000000000000000006604 121.0
DYD1_k127_5125830_0 Barrel-sandwich domain of CusB or HlyD membrane-fusion K07798 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002798 515.0
DYD1_k127_5125830_1 Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family K07798 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001051 512.0
DYD1_k127_5125830_2 Outer membrane efflux protein - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004821 496.0
DYD1_k127_5125830_3 Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family K07787,K15726 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008664 474.0
DYD1_k127_5125830_4 Haem-binding domain - - - 0.0000000000000000000000000000001785 125.0
DYD1_k127_5146263_0 FeS assembly protein SufD K09015 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001424 580.0
DYD1_k127_5146263_1 Catalyzes the removal of elemental sulfur and selenium atoms from L-cysteine, L-cystine, L-selenocysteine, and L- selenocystine to produce L-alanine K11717 - 2.8.1.7,4.4.1.16 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004802 312.0
DYD1_k127_5146263_2 FeS assembly ATPase SufC K09013 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000001737 293.0
DYD1_k127_5151388_0 One of the essential components for the initiation of protein synthesis. Protects formylmethionyl-tRNA from spontaneous hydrolysis and promotes its binding to the 30S ribosomal subunits. Also involved in the hydrolysis of GTP during the formation of the 70S ribosomal complex K02519 - - 0.0 1071.0
DYD1_k127_5151388_1 peptidylprolyl isomerase K03771 - 5.2.1.8 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002413 546.0
DYD1_k127_515217_0 Catalyzes the reversible interconversion of isobutyryl- CoA and n-butyryl-CoA, using radical chemistry. Also exhibits GTPase activity, associated with its G-protein domain (MeaI) that functions as a chaperone that assists cofactor delivery and proper holo-enzyme assembly K11942 - 5.4.99.13 2.88e-249 779.0
DYD1_k127_5168740_0 4-amino-4-deoxy-L-arabinose transferase activity - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000613 356.0
DYD1_k127_5169800_0 COGs COG1680 Beta-lactamase class C and other penicillin binding protein - - - 3.273e-214 676.0
DYD1_k127_5169800_1 - - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008191 310.0
DYD1_k127_5169800_2 - - - - 0.0000000000000000000000000000000000000000000000000000000000000000003842 237.0
DYD1_k127_5169800_3 - - - - 0.000000000000000000000003323 111.0
DYD1_k127_5169800_5 Catalyzes the transfer of a formyl group from 10- formyltetrahydrofolate to 5-phospho-ribosyl-glycinamide (GAR), producing 5-phospho-ribosyl-N-formylglycinamide (FGAR) and tetrahydrofolate K11175 - 2.1.2.2 0.0000000001243 62.0
DYD1_k127_5172654_0 C-terminal region of band_7 - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002474 524.0
DYD1_k127_5172654_1 cellular response to DNA damage stimulus K07340 - - 0.000000000000000000000000000000000000000001688 160.0
DYD1_k127_5172660_0 COG0544 FKBP-type peptidyl-prolyl cis-trans isomerase (trigger factor) K03545 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006777 600.0
DYD1_k127_5172660_1 Cleaves peptides in various proteins in a process that requires ATP hydrolysis. Has a chymotrypsin-like activity. Plays a major role in the degradation of misfolded proteins K01358 - 3.4.21.92 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001057 381.0
DYD1_k127_5172660_2 Cleaves peptides in various proteins in a process that requires ATP hydrolysis. Has a chymotrypsin-like activity. Plays a major role in the degradation of misfolded proteins K01358 - 3.4.21.92 0.00000000000000000000000000000000000000000000000000000000000000000000001079 245.0
DYD1_k127_5172660_3 - - - - 0.000000101 54.0
DYD1_k127_5173655_0 Belongs to the class-I aminoacyl-tRNA synthetase family K01869 GO:0003674,GO:0003824,GO:0004812,GO:0004823,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006082,GO:0006139,GO:0006399,GO:0006412,GO:0006418,GO:0006429,GO:0006518,GO:0006520,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0016070,GO:0016874,GO:0016875,GO:0019538,GO:0019752,GO:0034641,GO:0034645,GO:0034660,GO:0043038,GO:0043039,GO:0043043,GO:0043170,GO:0043436,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044281,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0071704,GO:0090304,GO:0140098,GO:0140101,GO:1901360,GO:1901564,GO:1901566,GO:1901576 6.1.1.4 7.997e-220 694.0
DYD1_k127_5174506_0 Nucleotidyl transferase K00973 - 2.7.7.24 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008415 509.0
DYD1_k127_5174506_1 2-nitropropane dioxygenase K02371 - 1.3.1.9 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007535 463.0
DYD1_k127_5174506_2 Catalyzes the reversible interconversion of serine and glycine with tetrahydrofolate (THF) serving as the one-carbon carrier. This reaction serves as the major source of one-carbon groups required for the biosynthesis of purines, thymidylate, methionine, and other important biomolecules. Also exhibits THF- independent aldolase activity toward beta-hydroxyamino acids, producing glycine and aldehydes, via a retro-aldol mechanism K00600 - 2.1.2.1 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008712 314.0
DYD1_k127_5174506_3 PFAM Phosphoesterase, HXTX - - - 0.00000000000000000000000000000000000000000000000000874 185.0
DYD1_k127_5174506_4 nuclear chromosome segregation - - - 0.0000000000000000685 86.0
DYD1_k127_5174506_5 Pfam Plasmid stabilisation system protein - - - 0.00000008406 56.0
DYD1_k127_5174506_6 CarboxypepD_reg-like domain - - - 0.0000006161 56.0
DYD1_k127_5180239_0 Cell division protein FtsI penicillin-binding protein 2 K03587 - 3.4.16.4 7.784e-252 795.0
DYD1_k127_5180239_1 Catalyzes the addition of meso-diaminopimelic acid to the nucleotide precursor UDP-N-acetylmuramoyl-L-alanyl-D-glutamate (UMAG) in the biosynthesis of bacterial cell-wall peptidoglycan K01928 - 6.3.2.13 5.85e-244 760.0
DYD1_k127_5180239_2 First step of the lipid cycle reactions in the biosynthesis of the cell wall peptidoglycan K01000 - 2.7.8.13 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001411 308.0
DYD1_k127_5182741_0 PFAM X-Pro dipeptidyl-peptidase C-terminal non-catalytic domain K06978 - - 2.902e-260 809.0
DYD1_k127_5187520_0 acyl-CoA dehydrogenase - - - 2.076e-313 967.0
DYD1_k127_5187520_1 PFAM Glycosyl transferase family 2 - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001674 399.0
DYD1_k127_5187520_2 PFAM alpha beta hydrolase fold - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001845 314.0
DYD1_k127_5187520_3 Transcriptional regulator - - - 0.000000000000000000000000000000000000000000000000000000000000000000002186 238.0
DYD1_k127_5187520_4 O-Antigen ligase - - - 0.00000000000000000000000001139 113.0
DYD1_k127_5191090_0 Couples transcription and DNA repair by recognizing RNA polymerase (RNAP) stalled at DNA lesions. Mediates ATP-dependent release of RNAP and its truncated transcript from the DNA, and recruitment of nucleotide excision repair machinery to the damaged site K03723 - - 0.0 1054.0
DYD1_k127_5193968_0 seryl-tRNA synthetase K01875 - 6.1.1.11 1.436e-205 647.0
DYD1_k127_5193968_1 Protein of unknown function (DUF1800) - - - 0.0000000000000000000000000000000000000000000000000000000000431 209.0
DYD1_k127_5193968_2 - - - - 0.000000000000000000000000000000000000000000000000000005196 192.0
DYD1_k127_5194707_0 Protein of unknown function (DUF3667) - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000001178 301.0
DYD1_k127_5194707_1 PFAM MazG nucleotide pyrophosphohydrolase K02428 - 3.6.1.66 0.0000000000000000000000000000000000000000000000000001189 187.0
DYD1_k127_5194707_2 self proteolysis - - - 0.00000000000000000000000000000000000000000000000002086 190.0
DYD1_k127_5194707_3 Transcriptional regulatory protein, C terminal K07667 - - 0.000000000001018 71.0
DYD1_k127_5194707_4 CHAD - - - 0.000005314 57.0
DYD1_k127_519976_0 Protein of unknown function (DUF2723) - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003833 490.0
DYD1_k127_5202812_0 Methyltransferase, chemotaxis proteins K13924 - 2.1.1.80,3.1.1.61 6.584e-225 724.0
DYD1_k127_5241764_0 Asparaginyl-tRNA synthetase K01893 - 6.1.1.22 1.591e-268 831.0
DYD1_k127_5241764_1 Facilitates transcription termination by a mechanism that involves Rho binding to the nascent RNA, activation of Rho's RNA-dependent ATPase activity, and release of the mRNA from the DNA template K03628 - - 8.114e-257 801.0
DYD1_k127_5241764_2 Universal stress protein family - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000009183 286.0
DYD1_k127_5241764_3 PFAM PspC domain K03973 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000001199 278.0
DYD1_k127_5241764_4 Rhodanese Homology Domain K06917 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000001151 260.0
DYD1_k127_5241764_5 Transcriptional regulator K10947 - - 0.00000000000000000000000000000000000000000000000000000000002085 208.0
DYD1_k127_5241764_6 PFAM Biopolymer transport protein ExbD TolR - - - 0.00000000000000000000000000000001292 134.0
DYD1_k127_5247817_0 - - - - 0.00000000000000000000000000000007279 134.0
DYD1_k127_5247817_1 Tetratricopeptide repeat - - - 0.000000000000000000000005506 111.0
DYD1_k127_5247817_2 - - - - 0.00000000000000000000001311 110.0
DYD1_k127_5247817_3 - - - - 0.000000000000000335 82.0
DYD1_k127_5247817_4 - - - - 0.000000000000008505 77.0
DYD1_k127_5247817_5 - - - - 0.000144 50.0
DYD1_k127_5250015_0 First step of the lipid cycle reactions in the biosynthesis of the cell wall peptidoglycan K01000 - 2.7.8.13 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003579 462.0
DYD1_k127_5252340_0 Catalyzes two steps in the biosynthesis of coenzyme A. In the first step cysteine is conjugated to 4'-phosphopantothenate to form 4-phosphopantothenoylcysteine, in the latter compound is decarboxylated to form 4'-phosphopantotheine K13038 - 4.1.1.36,6.3.2.5 0.000000000000000000000000000000000000000000000000000000000000000000000000000000005488 272.0
DYD1_k127_5252340_1 RNA polymerase - - - 0.000000000000000000000000000000000000000000000000000108 187.0
DYD1_k127_5252340_2 outer membrane assembly lipoprotein YfiO K05807 - - 0.000000008634 58.0
DYD1_k127_5261596_0 homoserine dehydrogenase K00003 - 1.1.1.3 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000089 574.0
DYD1_k127_5261596_1 Polysaccharide biosynthesis protein - - - 0.000000000000001737 77.0
DYD1_k127_5263334_0 Oxidoreductase K00184 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008189 589.0
DYD1_k127_5263334_1 PFAM restriction modification system DNA specificity domain K01154 - 3.1.21.3 0.0000000000000006116 91.0
DYD1_k127_528210_0 Type IIA topoisomerase (DNA gyrase topo II topoisomerase IV) B subunit K02622 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005948 533.0
DYD1_k127_528210_1 PFAM SMP-30 Gluconolaconase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000006738 250.0
DYD1_k127_5299439_0 Catalyzes the reversible interconversion of serine and glycine with tetrahydrofolate (THF) serving as the one-carbon carrier. This reaction serves as the major source of one-carbon groups required for the biosynthesis of purines, thymidylate, methionine, and other important biomolecules. Also exhibits THF- independent aldolase activity toward beta-hydroxyamino acids, producing glycine and aldehydes, via a retro-aldol mechanism K00600 - 2.1.2.1 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002989 464.0
DYD1_k127_5299439_1 The UvrABC repair system catalyzes the recognition and processing of DNA lesions. UvrA is an ATPase and a DNA-binding protein. A damage recognition complex composed of 2 UvrA and 2 UvrB subunits scans DNA for abnormalities. When the presence of a lesion has been verified by UvrB, the UvrA molecules dissociate K03701 - - 0.00000000000000000000000000000000000000000000000000000005757 196.0
DYD1_k127_5299439_2 Belongs to the peptidase S8 family - - - 0.00000000000000000000000000000000000000000000000008913 204.0
DYD1_k127_5299941_0 Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family K00819 - 2.6.1.13 7.05e-206 646.0
DYD1_k127_5299941_1 Endoribonuclease L-PSP - - - 0.00000000000000000000000000000000000000000000000000223 186.0
DYD1_k127_5299941_2 regulation of ryanodine-sensitive calcium-release channel activity - - - 0.000000000000000000000000000000000000000000007074 172.0
DYD1_k127_5311016_1 - - - - 0.0000000000000000000000000007434 122.0
DYD1_k127_5311016_2 - - - - 0.00000000000000000000001091 116.0
DYD1_k127_5311016_3 - - - - 0.0000000000000000000001982 105.0
DYD1_k127_5311016_4 - - - - 0.000000000000001751 86.0
DYD1_k127_5313900_0 Is required not only for elongation of protein synthesis but also for the initiation of all mRNA translation through initiator tRNA(fMet) aminoacylation K01874 GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006082,GO:0006139,GO:0006399,GO:0006412,GO:0006418,GO:0006518,GO:0006520,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0016070,GO:0019538,GO:0019752,GO:0034641,GO:0034645,GO:0034660,GO:0043038,GO:0043039,GO:0043043,GO:0043170,GO:0043436,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044281,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0071704,GO:0090304,GO:1901360,GO:1901564,GO:1901566,GO:1901576 6.1.1.10 0.0 1134.0
DYD1_k127_5313900_1 LD-carboxypeptidase K01297 - 3.4.17.13 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001689 459.0
DYD1_k127_5313900_2 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000002066 262.0
DYD1_k127_5313900_3 Belongs to the UPF0312 family - - - 0.00000000000000000000000000000000000000000000000000002361 193.0
DYD1_k127_5313900_4 peptidase K01297 - 3.4.17.13 0.0000000000000000000000000000000000000000001144 161.0
DYD1_k127_5313900_5 tRNA_anti-like - - - 0.0000000000005499 76.0
DYD1_k127_5315207_0 Lipase (class 3) - - - 0.0000000000000000000000000000000000000000000000000000000001451 216.0
DYD1_k127_5315207_1 Cytochrome c - - - 0.000000000000001189 81.0
DYD1_k127_5315207_2 DinB superfamily - - - 0.0009645 43.0
DYD1_k127_5318808_0 it binds specifically double-stranded DNA at a 9 bp consensus (dnaA box) 5'-TTATC CA A CA A-3'. DnaA binds to ATP and to acidic phospholipids K02313 GO:0003674,GO:0003676,GO:0003677,GO:0003688,GO:0003690,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005886,GO:0006139,GO:0006259,GO:0006260,GO:0006261,GO:0006270,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0016020,GO:0034641,GO:0034645,GO:0043170,GO:0043565,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044424,GO:0044464,GO:0046483,GO:0071704,GO:0071944,GO:0090304,GO:0097159,GO:1901360,GO:1901363,GO:1901576,GO:1990837 - 1.329e-296 912.0
DYD1_k127_5318808_1 nucleotidyltransferase activity - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000475 286.0
DYD1_k127_5318808_2 - - - - 0.00000234 50.0
DYD1_k127_5321237_0 hemolysin activation secretion protein - - - 6.997e-208 675.0
DYD1_k127_5321237_1 Catalyzes the reversible oxidation of malate to oxaloacetate K00024 - 1.1.1.37 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006101 445.0
DYD1_k127_5321237_2 AhpC/TSA family - - - 0.00000000000000000000000000000000000000000000911 168.0
DYD1_k127_5321237_3 PKD domain containing protein - - - 0.00000000000000004403 81.0
DYD1_k127_5321237_4 PKD domain containing protein - - - 0.000000000008711 66.0
DYD1_k127_5321419_0 Flavin transferase that catalyzes the transfer of the FMN moiety of FAD and its covalent binding to the hydroxyl group of a threonine residue in a target flavoprotein K03734 - 2.7.1.180 0.000000000000000000000000000000000000000000000000000000000000000000000008238 245.0
DYD1_k127_5321419_1 Domain of unknown function (DUF4440) - - - 0.0000000000000000000000000000000000000000000000000000001192 199.0
DYD1_k127_5321419_2 Two component regulator propeller - - - 0.000000000000000000000000000000000000000000000000002135 185.0
DYD1_k127_5321419_3 - - - - 0.0000000000000000001353 91.0
DYD1_k127_5325090_0 Belongs to the arginase family K01480 - 3.5.3.11 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007075 527.0
DYD1_k127_5325090_1 Elongator protein 3, MiaB family, Radical SAM - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001707 347.0
DYD1_k127_533364_0 protein methyltransferase activity - - - 0.00000000000000000000000000000000000000000000002725 179.0
DYD1_k127_533364_1 Glycosyl transferases group 1 - - - 0.0000000000000000000000002709 113.0
DYD1_k127_5338146_0 Enoyl- acyl-carrier-protein reductase NADH K00208 - 1.3.1.10,1.3.1.9 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004456 478.0
DYD1_k127_5338146_1 Cobalamin adenosyltransferase K00798 - 2.5.1.17 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000002817 297.0
DYD1_k127_5338146_2 Part of the ABC transporter complex LolCDE involved in the translocation of K09810 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000002544 294.0
DYD1_k127_5338146_3 May be involved in recombinational repair of damaged DNA K03631 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000009532 246.0
DYD1_k127_5338146_4 Protein of unknown function (DUF2795) - - - 0.0000000000000000000000000000000000000003421 150.0
DYD1_k127_5338146_5 ABC transporter K02003 - - 0.00000000000000000000000000000000000001231 145.0
DYD1_k127_5338146_6 Part of the ABC transporter complex LolCDE involved in the translocation of K09810 - - 0.0000000006406 59.0
DYD1_k127_5340820_0 His Kinase A (phosphoacceptor) domain K07636 - 2.7.13.3 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004289 466.0
DYD1_k127_5340820_1 Transfers and isomerizes the ribose moiety from AdoMet to the 7-aminomethyl group of 7-deazaguanine (preQ1-tRNA) to give epoxyqueuosine (oQ-tRNA) K07568 - 2.4.99.17 0.000000000000000000000000000000000000000000000000000006967 193.0
DYD1_k127_5340820_2 acr, cog1678 K07735 - - 0.00000000000000000000000000000000000000000000000000005066 188.0
DYD1_k127_5355977_0 proton-translocating NADH-quinone oxidoreductase, chain M K00342 - 1.6.5.3 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002344 608.0
DYD1_k127_5355977_1 NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be a menaquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient K00343 - 1.6.5.3 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001038 578.0
DYD1_k127_5355977_2 ABC-type antimicrobial peptide transport system, permease component K02004 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000198 532.0
DYD1_k127_5355977_3 COG1009 NADH ubiquinone oxidoreductase subunit 5 (chain L) Multisubunit Na H antiporter MnhA subunit K00341 - 1.6.5.3 0.000000000000008248 75.0
DYD1_k127_5360008_0 PFAM Glycoside hydrolase, family 77 K00705 - 2.4.1.25 0.000000000000000000000000000000000000000000000000000000000000000000000000000000002135 278.0
DYD1_k127_5360008_1 Proteolipid membrane potential modulator - - - 0.00000000000000000000000000002806 121.0
DYD1_k127_5360008_3 - - - - 0.00002838 53.0
DYD1_k127_5360008_4 SnoaL-like polyketide cyclase - - - 0.0004815 49.0
DYD1_k127_5367602_0 - - - - 0.000000000000000000000000000000000000000000000000000000000000000000008024 245.0
DYD1_k127_5367602_1 - - - - 0.000000000001958 69.0
DYD1_k127_5383503_0 TIGRFAM single-stranded-DNA-specific exonuclease RecJ K07462 - - 7.099e-267 831.0
DYD1_k127_5383503_1 Belongs to the FPP GGPP synthase family K02523 - 2.5.1.90 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000451 451.0
DYD1_k127_5383503_2 OmpA MotB domain protein K03286 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000162 392.0
DYD1_k127_5383503_3 DNA repair - - - 0.000000000151 70.0
DYD1_k127_5399473_0 decarboxylase K01585 - 4.1.1.19 9.872e-279 859.0
DYD1_k127_5399473_1 - - - - 0.0000000000000000000000000000000000000000000009704 169.0
DYD1_k127_5399473_2 Belongs to the small heat shock protein (HSP20) family K13993 - - 0.00000000000000000000000000000000000000002266 156.0
DYD1_k127_5399473_3 Belongs to the UPF0403 family - - - 0.000000000000000000000000001016 113.0
DYD1_k127_5399473_4 Binds directly to 23S ribosomal RNA and is necessary for the in vitro assembly process of the 50S ribosomal subunit. It is not involved in the protein synthesizing functions of that subunit K02887 GO:0000027,GO:0003674,GO:0003735,GO:0005198,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0006996,GO:0008150,GO:0009987,GO:0015934,GO:0016043,GO:0022607,GO:0022613,GO:0022618,GO:0022625,GO:0022626,GO:0032991,GO:0034622,GO:0042254,GO:0042255,GO:0042273,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043933,GO:0044085,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:0065003,GO:0070925,GO:0071826,GO:0071840,GO:1990904 - 0.0000000000000001843 79.0
DYD1_k127_5399636_0 DNA polymerase III delta subunit K02340 - 2.7.7.7 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003367 422.0
DYD1_k127_5399636_1 Transposase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004248 336.0
DYD1_k127_5399636_2 IF-3 binds to the 30S ribosomal subunit and shifts the equilibrum between 70S ribosomes and their 50S and 30S subunits in favor of the free subunits, thus enhancing the availability of 30S subunits on which protein synthesis initiation begins K02520 GO:0003674,GO:0003676,GO:0003723,GO:0003743,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006412,GO:0006413,GO:0006518,GO:0006807,GO:0006996,GO:0008135,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0016020,GO:0016043,GO:0019538,GO:0022411,GO:0032790,GO:0032984,GO:0032988,GO:0034641,GO:0034645,GO:0043021,GO:0043022,GO:0043043,GO:0043170,GO:0043603,GO:0043604,GO:0043933,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044424,GO:0044444,GO:0044464,GO:0044877,GO:0071704,GO:0071826,GO:0071840,GO:0097159,GO:1901363,GO:1901564,GO:1901566,GO:1901576,GO:1903008 - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004418 317.0
DYD1_k127_5399636_3 Catalyzes the attachment of threonine to tRNA(Thr) in a two-step reaction L-threonine is first activated by ATP to form Thr-AMP and then transferred to the acceptor end of tRNA(Thr) K01868 GO:0003674,GO:0003824,GO:0004812,GO:0004829,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006082,GO:0006139,GO:0006399,GO:0006412,GO:0006418,GO:0006435,GO:0006518,GO:0006520,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0016070,GO:0016874,GO:0016875,GO:0019538,GO:0019752,GO:0034641,GO:0034645,GO:0034660,GO:0043038,GO:0043039,GO:0043043,GO:0043170,GO:0043436,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044281,GO:0044424,GO:0044464,GO:0046483,GO:0071704,GO:0090304,GO:0140098,GO:0140101,GO:1901360,GO:1901564,GO:1901566,GO:1901576 6.1.1.3 0.000000000000000000000000000000000000000000000000000000000000000000000000004163 254.0
DYD1_k127_5403724_0 Serine aminopeptidase, S33 K06889 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002877 451.0
DYD1_k127_5403724_1 Transport of potassium into the cell K03549 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000932 437.0
DYD1_k127_5403724_2 peptidase K01297 - 3.4.17.13 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005942 329.0
DYD1_k127_5403724_3 Hydrolase with alpha beta fold protein K06889 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000001144 292.0
DYD1_k127_5403724_4 peptidyl-tyrosine sulfation - - - 0.000000000000000000000000000000000000000001736 171.0
DYD1_k127_5407645_0 Zinc carboxypeptidase - - - 0.0 1049.0
DYD1_k127_5407645_1 Forms passive diffusion pores that allow small molecular weight hydrophilic materials across the outer membrane - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002387 501.0
DYD1_k127_5407645_2 Asparaginase K13051 - 3.4.19.5 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001824 434.0
DYD1_k127_5407645_3 Catalyzes the ADP transfer from ATP to D-glycero-beta-D- manno-heptose 1-phosphate, yielding ADP-D-glycero-beta-D-manno- heptose K03272 - 2.7.1.167,2.7.7.70 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005611 343.0
DYD1_k127_5407645_4 Zinc carboxypeptidase - - - 0.00000000000000000000000000000000000000000001589 163.0
DYD1_k127_5407645_5 - - - - 0.000000000000000000633 96.0
DYD1_k127_5415094_0 Saccharopine dehydrogenase K00290,K00293 - 1.5.1.10,1.5.1.7 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001115 310.0
DYD1_k127_5415094_1 - - - - 0.0000000000002423 76.0
DYD1_k127_5418870_0 3-hydroxyacyl-CoA dehydrogenase K07516 - 1.1.1.35 3.281e-198 621.0
DYD1_k127_5418870_1 Peptidase M16 - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007021 496.0
DYD1_k127_5418870_2 Adenylate and Guanylate cyclase catalytic domain K01768 - 4.6.1.1 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004518 418.0
DYD1_k127_5418870_3 Insulinase (Peptidase family M16) - - - 0.0000000001263 66.0
DYD1_k127_5420394_0 Peptidase, family M20 M25 M40 - - - 4.018e-219 684.0
DYD1_k127_5420394_1 Poorly processive, error-prone DNA polymerase involved in untargeted mutagenesis. Copies undamaged DNA at stalled replication forks, which arise in vivo from mismatched or misaligned primer ends. These misaligned primers can be extended by PolIV. Exhibits no 3'-5' exonuclease (proofreading) activity. May be involved in translesional synthesis, in conjunction with the beta clamp from PolIII K02346 - 2.7.7.7 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001164 533.0
DYD1_k127_5426236_0 SPTR Peptidase S8 and S53 subtilisin kexin sedolisin - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003123 426.0
DYD1_k127_5426236_1 Belongs to the UPF0337 (CsbD) family - - - 0.0000000000000000000001019 100.0
DYD1_k127_5427666_0 FAD-dependent dehydrogenase K07137 - - 3.7e-216 679.0
DYD1_k127_5436698_0 DEAD DEAH box helicase K03724 - - 0.0 1202.0
DYD1_k127_5438299_0 Protein of unknown function (DUF2652) - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002327 413.0
DYD1_k127_5438299_1 Putative esterase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006952 372.0
DYD1_k127_5438299_2 Functions in the N-end rule pathway of protein degradation where it conjugates Leu, Phe and, less efficiently, Met from aminoacyl-tRNAs to the N-termini of proteins containing an N-terminal arginine or lysine K00684 - 2.3.2.6 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001014 324.0
DYD1_k127_5438299_3 Clp protease adaptor protein ClpS K06891 - - 0.00000000000000000000000000000000000000000123 158.0
DYD1_k127_5438299_4 PFAM Glyoxalase bleomycin resistance protein dioxygenase - - - 0.00000000000000000000000000000000003089 141.0
DYD1_k127_5438299_5 Parallel beta-helix repeats - - - 0.00000000000000001331 96.0
DYD1_k127_5438299_6 response regulator - - - 0.0000000000001196 72.0
DYD1_k127_5439006_0 acetyl-CoA carboxylase, biotin carboxylase K01961 - 6.3.4.14,6.4.1.2 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002889 474.0
DYD1_k127_5439006_1 first, biotin carboxylase catalyzes the carboxylation of the carrier protein and then the transcarboxylase transfers the carboxyl group to form malonyl-CoA K02160 - - 0.00000000000000000000000000000000000000000000000000223 185.0
DYD1_k127_5445051_0 PFAM Cytochrome C oxidase subunit II, periplasmic domain K00376 - 1.7.2.4 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004109 436.0
DYD1_k127_5445051_1 lipoprotein involved in nitrous oxide reduction K19342 - - 0.00000000000000000000000000000000000000000000000193 176.0
DYD1_k127_5453720_0 N-acetyl-alpha-D-glucosaminyl L-malate synthase K00754 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000186 594.0
DYD1_k127_5453720_1 Has lipid A 3-O-deacylase activity. Hydrolyzes the ester bond at the 3 position of lipid A, a bioactive component of lipopolysaccharide (LPS), thereby releasing the primary fatty acyl moiety - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003193 499.0
DYD1_k127_5453720_2 Peptidase, M23 - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000003559 309.0
DYD1_k127_5453720_3 Domain of unknown function (DUF4292) - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000001393 263.0
DYD1_k127_5453720_4 Peptidase family C25 - - - 0.0000000000000000000000000000000000000000000000000000000000000000000003057 244.0
DYD1_k127_5453720_5 Involved in the biosynthesis of isopentenyl diphosphate (IPP) and dimethylallyl diphosphate (DMAPP), two major building blocks of isoprenoid compounds. Catalyzes the conversion of 4- diphosphocytidyl-2-C-methyl-D-erythritol 2-phosphate (CDP-ME2P) to 2-C-methyl-D-erythritol 2,4-cyclodiphosphate (ME-CPP) with a corresponding release of cytidine 5-monophosphate (CMP) K01770 - 4.6.1.12 0.000000000000000000000000000000000000000000000000000000000000000000004904 237.0
DYD1_k127_5453720_6 This enzyme is involved in nucleotide metabolism it produces dUMP, the immediate precursor of thymidine nucleotides and it decreases the intracellular concentration of dUTP so that uracil cannot be incorporated into DNA K01520 GO:0000287,GO:0003674,GO:0003824,GO:0004170,GO:0005488,GO:0006139,GO:0006220,GO:0006221,GO:0006226,GO:0006244,GO:0006725,GO:0006753,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0009056,GO:0009058,GO:0009117,GO:0009123,GO:0009124,GO:0009129,GO:0009130,GO:0009141,GO:0009143,GO:0009147,GO:0009149,GO:0009157,GO:0009162,GO:0009165,GO:0009166,GO:0009176,GO:0009177,GO:0009200,GO:0009204,GO:0009211,GO:0009213,GO:0009219,GO:0009221,GO:0009223,GO:0009262,GO:0009263,GO:0009264,GO:0009265,GO:0009394,GO:0009987,GO:0016462,GO:0016787,GO:0016817,GO:0016818,GO:0018130,GO:0019438,GO:0019439,GO:0019637,GO:0019692,GO:0034404,GO:0034641,GO:0034654,GO:0034655,GO:0043167,GO:0043169,GO:0044237,GO:0044238,GO:0044248,GO:0044249,GO:0044270,GO:0044271,GO:0044281,GO:0044283,GO:0046078,GO:0046080,GO:0046081,GO:0046385,GO:0046386,GO:0046434,GO:0046483,GO:0046700,GO:0046872,GO:0047429,GO:0055086,GO:0071704,GO:0072527,GO:0072528,GO:0072529,GO:0090407,GO:1901135,GO:1901136,GO:1901137,GO:1901292,GO:1901293,GO:1901360,GO:1901361,GO:1901362,GO:1901564,GO:1901565,GO:1901566,GO:1901575,GO:1901576 3.6.1.23 0.0000000000000000000000000000000000000000000000000000000000007166 213.0
DYD1_k127_5453720_7 Peptidase family M28 - - - 0.000000000000000000000000000000000000000000000000000000000009265 214.0
DYD1_k127_5455100_0 Tetratricopeptide repeat - - - 0.0000000000000000000000000000000000000000000000000000002151 206.0
DYD1_k127_5455843_0 ftsk spoiiie - - - 0.000000000000000000000000000000000000000000000000000000000000000001667 252.0
DYD1_k127_5455843_1 Tetratricopeptide repeat - - - 0.000000000000000000000004566 118.0
DYD1_k127_5465096_0 Catalyzes the reversible transfer of the terminal phosphate of ATP to form a long-chain polyphosphate (polyP) K00937 - 2.7.4.1 8.725e-269 841.0
DYD1_k127_5468292_0 TonB-dependent receptor K02014 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003858 512.0
DYD1_k127_5468292_1 Belongs to the sigma-70 factor family. ECF subfamily K03088 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000006628 254.0
DYD1_k127_5468292_2 MerR family K22491 - - 0.0000000000000000000008324 100.0
DYD1_k127_5472981_0 Protein of unknown function (DUF1015) - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000444 338.0
DYD1_k127_5472981_1 Tetratricopeptide repeat - - - 0.000000000000000000000000000000000000000000000000000000008486 203.0
DYD1_k127_5497484_0 Peptidase family M1 domain - - - 1.86e-199 629.0
DYD1_k127_5497484_1 Membrane protein involved in the export of O-antigen and teichoic acid - - - 0.0000000000000000002382 89.0
DYD1_k127_5535397_0 Belongs to the heme-copper respiratory oxidase family K02274 - 1.9.3.1 0.0 1030.0
DYD1_k127_5535397_1 PFAM Polysulphide reductase, NrfD K00185 - - 2.362e-278 859.0
DYD1_k127_5535397_10 protein SCO1 SenC PrrC involved in biogenesis of respiratory and photosynthetic systems K07152 - - 0.000000000000000000000000000000000000000000000000000000000000000008564 231.0
DYD1_k127_5535397_11 Prokaryotic Cytochrome C oxidase subunit IV - - - 0.0000000000000000000000000000000003807 135.0
DYD1_k127_5535397_2 Oxidoreductase K00184 - - 7.394e-241 755.0
DYD1_k127_5535397_3 Quinol cytochrome c oxidoreductase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001273 578.0
DYD1_k127_5535397_4 Subunits I and II form the functional core of the enzyme complex. Electrons originating in cytochrome c are transferred via heme a and Cu(A) to the binuclear center formed by heme a3 and Cu(B) K02275 - 1.9.3.1 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009339 478.0
DYD1_k127_5535397_5 Converts heme B (protoheme IX) to heme O by substitution of the vinyl group on carbon 2 of heme B porphyrin ring with a hydroxyethyl farnesyl side group K02257 - 2.5.1.141 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006309 423.0
DYD1_k127_5535397_6 oxidase subunit III K02276 - 1.9.3.1 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009705 385.0
DYD1_k127_5535397_7 Quinol cytochrome c oxidoreductase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003396 323.0
DYD1_k127_5535397_8 cytochrome c oxidase subunit III K02276 - 1.9.3.1 0.0000000000000000000000000000000000000000000000000000000000000000000003042 242.0
DYD1_k127_5535397_9 cytochrome C - - - 0.0000000000000000000000000000000000000000000000000000000000000000009887 233.0
DYD1_k127_5542796_0 Glycosyltransferase like family 2 - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000002915 304.0
DYD1_k127_5542796_2 O-Antigen ligase - - - 0.00000000000000000000000000000000755 134.0
DYD1_k127_554903_0 TonB-dependent Receptor Plug Domain K02014 - - 1.583e-280 878.0
DYD1_k127_554903_1 Putative auto-transporter adhesin, head GIN domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000005646 236.0
DYD1_k127_554903_2 An essential GTPase that binds both GDP and GTP, with rapid nucleotide exchange. Plays a role in 16S rRNA processing and 30S ribosomal subunit biogenesis and possibly also in cell cycle regulation and energy metabolism K03595 - - 0.000000000000000000000000000000000000000002122 156.0
DYD1_k127_554903_3 Domain of Unknown Function (DUF326) - - - 0.00000000000000000000000000000000000000003851 154.0
DYD1_k127_554903_4 Putative auto-transporter adhesin, head GIN domain - - - 0.00000000000000000000002159 109.0
DYD1_k127_5554031_0 - - - - 0.00000000000000007085 84.0
DYD1_k127_5554031_2 Astacin (Peptidase family M12A) - - - 0.00000000000004859 83.0
DYD1_k127_5578240_0 PFAM sulfatase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000367 330.0
DYD1_k127_5578240_1 DinB family - - - 0.0000000000000000000000000000000000005437 141.0
DYD1_k127_5590111_0 Methylmalonyl-CoA mutase K01848 - 5.4.99.2 1.62e-274 850.0
DYD1_k127_5590111_1 C-terminal domain of CHU protein family - - - 0.00000000000000000000000000000000000000000000000000000002369 221.0
DYD1_k127_5590111_2 Alg9-like mannosyltransferase family K05286 - - 0.000000000000000000000000000000000000000000000000000003595 210.0
DYD1_k127_5590111_3 - - - - 0.00000000000001496 74.0
DYD1_k127_5590111_4 Pregnancy-associated plasma protein-A - - - 0.00001915 58.0
DYD1_k127_562411_0 - - - - 0.000000000000000000000000000000000000000000000000000000000000000000000003749 257.0
DYD1_k127_562411_2 COG0491 Zn-dependent hydrolases, including glyoxylases - - - 0.000000000000000003623 87.0
DYD1_k127_5643452_0 Transporter K14445 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009033 506.0
DYD1_k127_5643452_1 Type IX secretion system membrane protein PorP/SprF - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009353 316.0
DYD1_k127_5643452_2 Belongs to the DNA glycosylase MPG family K03652 - 3.2.2.21 0.000000005973 57.0
DYD1_k127_565968_0 NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be a menaquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient K00343 - 1.6.5.3 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000138 619.0
DYD1_k127_565968_1 NADH-quinone oxidoreductase, chain M K00342 - 1.6.5.3 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003691 334.0
DYD1_k127_5662283_0 Bifunctional enzyme that catalyzes the epimerization of the S- and R-forms of NAD(P)HX and the dehydration of the S-form of NAD(P)HX at the expense of ADP, which is converted to AMP. This allows the repair of both epimers of NAD(P)HX, a damaged form of NAD(P)H that is a result of enzymatic or heat-dependent hydration K17758,K17759 - 4.2.1.136,5.1.99.6 0.00000000000000000000000000000000000000000000000000000000000000000000000000000838 267.0
DYD1_k127_5668376_0 Peptidase family M28 - - - 1.952e-234 736.0
DYD1_k127_5668376_1 lysine 2,3-aminomutase K01843 - 5.4.3.2 0.000000000000000000000000000000000000000000000000000000000000000000000000002731 256.0
DYD1_k127_5668376_2 - - - - 0.00000000000000000000000000000000007638 136.0
DYD1_k127_5670765_0 Releases the N-terminal proline from various substrates K01259 - 3.4.11.5 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009422 421.0
DYD1_k127_567138_0 Evidence 4 Homologs of previously reported genes of - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002379 563.0
DYD1_k127_567138_1 - - - - 0.00000000000000000000000000000000000000000000000000000666 193.0
DYD1_k127_567138_2 GMP synthase-glutamine amidotransferase - - - 0.000000000000000000000000000000005866 129.0
DYD1_k127_5675045_0 NAD-binding protein involved in the addition of a carboxymethylaminomethyl (cmnm) group at the wobble position (U34) of certain tRNAs, forming tRNA-cmnm(5)s(2)U34 K03495 GO:0000166,GO:0001510,GO:0002097,GO:0002098,GO:0003674,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006139,GO:0006396,GO:0006399,GO:0006400,GO:0006725,GO:0006807,GO:0008033,GO:0008150,GO:0008152,GO:0009451,GO:0009987,GO:0010467,GO:0016070,GO:0030488,GO:0032259,GO:0034470,GO:0034641,GO:0034660,GO:0036094,GO:0043167,GO:0043168,GO:0043170,GO:0043412,GO:0043414,GO:0044237,GO:0044238,GO:0044260,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0048037,GO:0050660,GO:0050662,GO:0071704,GO:0090304,GO:0097159,GO:1901265,GO:1901360,GO:1901363 - 1.9e-322 994.0
DYD1_k127_5675045_1 transporter of a GTP-driven Fe(2 ) uptake system K04759 - - 8.064e-318 987.0
DYD1_k127_5675045_10 SET domain - - - 0.000000000000000000000000000000000000000006391 160.0
DYD1_k127_5675045_11 Single strand-specific metallo-endoribonuclease involved in late-stage 70S ribosome quality control and in maturation of the 3' terminus of the 16S rRNA - - - 0.00000000000000000000000000000000000000008557 155.0
DYD1_k127_5675045_12 FeoA K04758 - - 0.0000000000000000000000002581 106.0
DYD1_k127_5675045_2 Peptidase, M28 - - - 4.122e-219 693.0
DYD1_k127_5675045_3 Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain K01921 - 6.3.2.4 7.118e-215 676.0
DYD1_k127_5675045_4 PFAM Peptidase family M20 M25 M40 K01436 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008969 566.0
DYD1_k127_5675045_5 TIGRFAM chromate transporter, chromate ion transporter (CHR) family K07240 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005492 559.0
DYD1_k127_5675045_6 Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain K01921 - 6.3.2.4 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001047 459.0
DYD1_k127_5675045_7 Catalyzes the reversible adenylation of nicotinate mononucleotide (NaMN) to nicotinic acid adenine dinucleotide (NaAD) K00969 - 2.7.7.18 0.000000000000000000000000000000000000000000000000000000000000000000000000000001412 266.0
DYD1_k127_5675045_9 single-stranded DNA-binding protein K03111 - - 0.000000000000000000000000000000000000000000001262 167.0
DYD1_k127_5679177_0 Carboxypeptidase regulatory-like domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009719 527.0
DYD1_k127_5679177_1 Produces ATP from ADP in the presence of a proton gradient across the membrane. The alpha chain is a regulatory subunit K02111 - 3.6.3.14 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003586 491.0
DYD1_k127_5680185_0 Catalyzes hydrolysis of the D-alanyl-D-alanine dipeptide K08641 - 3.4.13.22 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000001948 289.0
DYD1_k127_5680185_1 Catalyzes the anti-1,4-elimination of the C-3 phosphate and the C-6 proR hydrogen from 5-enolpyruvylshikimate-3-phosphate (EPSP) to yield chorismate, which is the branch point compound that serves as the starting substrate for the three terminal pathways of aromatic amino acid biosynthesis. This reaction introduces a second double bond into the aromatic ring system K01736 GO:0000166,GO:0003674,GO:0003824,GO:0004107,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006082,GO:0006520,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0008652,GO:0009058,GO:0009072,GO:0009073,GO:0009423,GO:0009987,GO:0010181,GO:0016053,GO:0016829,GO:0016835,GO:0016838,GO:0019438,GO:0019752,GO:0032553,GO:0036094,GO:0043167,GO:0043168,GO:0043436,GO:0043648,GO:0043650,GO:0044237,GO:0044238,GO:0044249,GO:0044281,GO:0044283,GO:0044424,GO:0044444,GO:0044464,GO:0046394,GO:0046417,GO:0048037,GO:0050662,GO:0071704,GO:0097159,GO:0097367,GO:1901265,GO:1901360,GO:1901362,GO:1901363,GO:1901564,GO:1901566,GO:1901576 4.2.3.5 0.00000000000000000000000000000007777 125.0
DYD1_k127_5701302_0 TIGRFAM sulfate adenylyltransferase, small subunit K00957 - 2.7.7.4 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001379 376.0
DYD1_k127_5701302_1 Reduction of activated sulfate into sulfite K00390 - 1.8.4.10,1.8.4.8 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003292 342.0
DYD1_k127_5701302_2 Rrf2 family transcriptional regulator - - - 0.00000000000000000000000000000000000000000000000000000003057 198.0
DYD1_k127_5701302_3 OsmC-like protein K07397 - - 0.000000000000000000000000001524 116.0
DYD1_k127_5701302_4 Belongs to the cation diffusion facilitator (CDF) transporter (TC 2.A.4) family - - - 0.000000000000000000000005576 102.0
DYD1_k127_5701302_5 Predicted membrane protein (DUF2061) - - - 0.00000000000000000002101 93.0
DYD1_k127_5703385_0 DNA repair enzyme that has both DNA N-glycosylase activity and AP-lyase activity. The DNA N-glycosylase activity releases various damaged pyrimidines from DNA by cleaving the N- glycosidic bond, leaving an AP (apurinic apyrimidinic) site. The AP-lyase activity cleaves the phosphodiester bond 3' to the AP site by a beta-elimination, leaving a 3'-terminal unsaturated sugar and a product with a terminal 5'-phosphate K10773 - 4.2.99.18 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005232 347.0
DYD1_k127_5703385_1 Gaf domain - - - 0.0000179 51.0
DYD1_k127_5730889_0 exodeoxyribonuclease III K01142 - 3.1.11.2 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002612 449.0
DYD1_k127_5730889_1 Catalyzes the reversible phosphorylation of UMP to UDP K09903 - 2.7.4.22 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003356 422.0
DYD1_k127_5730889_10 Domain of unknown function (DUF4286) - - - 0.00000000000000000000000000000000002814 137.0
DYD1_k127_5730889_11 Associates with the EF-Tu.GDP complex and induces the exchange of GDP to GTP. It remains bound to the aminoacyl-tRNA.EF- Tu.GTP complex up to the GTP hydrolysis stage on the ribosome K02357 GO:0003674,GO:0003676,GO:0003723,GO:0003746,GO:0005488,GO:0006412,GO:0006414,GO:0006518,GO:0006807,GO:0008135,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0019538,GO:0034641,GO:0034645,GO:0043043,GO:0043170,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0071704,GO:0097159,GO:1901363,GO:1901564,GO:1901566,GO:1901576 - 0.000000001492 58.0
DYD1_k127_5730889_2 COG0330 Membrane protease subunits stomatin prohibitin homologs - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001663 402.0
DYD1_k127_5730889_3 Belongs to the LOG family K06966 - 3.2.2.10 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002007 399.0
DYD1_k127_5730889_4 B12 binding domain K00548 - 2.1.1.13 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002568 352.0
DYD1_k127_5730889_5 ubiE/COQ5 methyltransferase family - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001243 340.0
DYD1_k127_5730889_6 Catalyzes the oxidation of either pyridoxine 5'- phosphate (PNP) or pyridoxamine 5'-phosphate (PMP) into pyridoxal 5'-phosphate (PLP) K00275 - 1.4.3.5 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002228 310.0
DYD1_k127_5730889_7 TIGRFAM HAD-superfamily hydrolase, subfamily IA, variant 3 K01560,K07025 - 3.8.1.2 0.00000000000000000000000000000000000000000000000000000000000000000000000002665 255.0
DYD1_k127_5730889_8 peptidase K03427 - 2.1.1.72 0.0000000000000000000000000000000000000001815 163.0
DYD1_k127_5730889_9 Histone-like DNA-binding protein which is capable of wrapping DNA to stabilize it, and thus to prevent its denaturation under extreme environmental conditions K03530 - - 0.0000000000000000000000000000000000000004175 149.0
DYD1_k127_5751504_0 GH3 auxin-responsive promoter - - - 8.552e-246 766.0
DYD1_k127_5751504_1 nicotinamide mononucleotide transporter K03811 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000004946 283.0
DYD1_k127_5751504_2 Peptidoglycan polymerase that catalyzes glycan chain elongation from lipid-linked precursors K03814 - 2.4.1.129 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000005262 278.0
DYD1_k127_5751504_3 ATPase kinase involved in NAD metabolism - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000008441 260.0
DYD1_k127_5751504_4 Lysine exporter protein (Lyse ygga) - - - 0.00000000000000000000000000000000000000000000000000000000000000000000005637 246.0
DYD1_k127_5751504_5 peptidase M23 - - - 0.0000000000000000000000000000000000000000000000000000000001584 209.0
DYD1_k127_5751504_6 Cupin domain - - - 0.0000000000000000000000000000000000000000167 154.0
DYD1_k127_5751504_7 Ketosteroid isomerase-related protein - - - 0.00000000000000000000000000000000003236 138.0
DYD1_k127_5766923_0 NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be a menaquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient K00333,K13378 - 1.6.5.3 1.697e-208 653.0
DYD1_k127_5766923_1 NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be a menaquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient K00332 - 1.6.5.3 0.0000000000000000000000000000000000000000000000000000004651 197.0
DYD1_k127_5766923_2 NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be a menaquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient K00331 - 1.6.5.3 0.000000000000000000000000000000000000000000000000000002565 191.0
DYD1_k127_5770792_0 PFAM Peptidase family M48 - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000974 366.0
DYD1_k127_5770792_1 Catalyzes the transfer of an acyl group from acyl- phosphate (acyl-PO(4)) to glycerol-3-phosphate (G3P) to form lysophosphatidic acid (LPA). This enzyme utilizes acyl-phosphate as fatty acyl donor, but not acyl-CoA or acyl-ACP K08591 - 2.3.1.15 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002321 311.0
DYD1_k127_5770792_2 Bacteriocin-protection, YdeI or OmpD-Associated - - - 0.000000000000000000000000000007927 119.0
DYD1_k127_5790878_0 Response regulator of the LytR AlgR family K02477 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000002066 262.0
DYD1_k127_5790878_1 Y_Y_Y domain - - - 0.000000000000000000000000000000000000000000000000000000000001725 216.0
DYD1_k127_5790878_2 Protein of unknown function, DUF393 - - - 0.0000000000000000000002328 98.0
DYD1_k127_5790940_0 Belongs to the pseudouridine synthase RsuA family K06178 - 5.4.99.22 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001717 410.0
DYD1_k127_5790940_1 Pseudouridine synthase K06179,K06180 - 5.4.99.23,5.4.99.24 0.0000000000000000000000000000000000000000000000000000000000000000000000000000003196 268.0
DYD1_k127_5790940_2 Methionine biosynthesis protein MetW - - - 0.0000000000000000000005096 107.0
DYD1_k127_5791158_0 Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000002654 276.0
DYD1_k127_5791158_1 Histidine kinase K07675 - 2.7.13.3 0.000000000000000000000000000000000000000000000000000000000000000000000000002095 266.0
DYD1_k127_5791158_2 Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain - - - 0.000000000003539 69.0
DYD1_k127_5793917_0 involved in cell wall biogenesis - - - 0.00000000000000000000001212 104.0
DYD1_k127_5793917_1 Tetratricopeptide repeat protein - - - 0.0000000000002345 81.0
DYD1_k127_5806821_0 COG0367 Asparagine synthase (glutamine-hydrolyzing) K01953 - 6.3.5.4 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001974 508.0
DYD1_k127_5806821_1 transferase activity, transferring glycosyl groups - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003305 436.0
DYD1_k127_5806821_2 - - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001561 414.0
DYD1_k127_5806821_3 Glycosyl transferases group 1 - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000241 387.0
DYD1_k127_5807768_0 Reversible hydration of carbon dioxide K01673 - 4.2.1.1 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004801 353.0
DYD1_k127_5807768_1 COG1131 ABC-type multidrug transport system ATPase component K01990 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001118 344.0
DYD1_k127_5807768_2 Catalyzes the reversible conversion of 2- phosphoglycerate into phosphoenolpyruvate. It is essential for the degradation of carbohydrates via glycolysis K01689 - 4.2.1.11 0.0000000000000000000000000000000000000000000004327 168.0
DYD1_k127_5807768_3 - - - - 0.00000000000000000000000000003367 119.0
DYD1_k127_5807768_4 Protein of unknown function (DUF433) - - - 0.00000000000000000000002233 101.0
DYD1_k127_5807768_5 - - - - 0.0000000000000000000004685 99.0
DYD1_k127_5807768_6 COG1131 ABC-type multidrug transport system ATPase component K01990 - - 0.000000001003 61.0
DYD1_k127_580814_0 FAD dependent oxidoreductase - - - 1.812e-202 643.0
DYD1_k127_580814_1 Belongs to the MurCDEF family K03802 - 6.3.2.29,6.3.2.30 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000003615 290.0
DYD1_k127_5810070_0 The glycine cleavage system catalyzes the degradation of glycine. The P protein binds the alpha-amino group of glycine through its pyridoxal phosphate cofactor K00281,K00283 - 1.4.4.2 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000686 547.0
DYD1_k127_5811575_0 Transglutaminase-like superfamily - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001617 404.0
DYD1_k127_5811575_1 Oxidoreductase - - - 0.000000000000000000000000000000000000000000000000000000000000000000009172 234.0
DYD1_k127_5811575_2 methyltransferase - - - 0.000000000000000000000000000000000000000183 159.0
DYD1_k127_5816262_0 PAS domain - - - 0.00000000000000000000000000000000000000000000000000000002707 199.0
DYD1_k127_5816262_1 MFS_1 like family - - - 0.00000000000006544 74.0
DYD1_k127_5816262_2 - - - - 0.00000002091 59.0
DYD1_k127_5817478_0 Oxidoreductase domain protein - - - 9.153e-207 651.0
DYD1_k127_5817478_1 Dihydroorotase, multifunctional complex type K01465 - 3.5.2.3 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009551 548.0
DYD1_k127_5817478_2 Domain of Unknown Function (DUF1080) - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007146 320.0
DYD1_k127_5817478_3 Domain of Unknown Function (DUF1080) - - - 0.00000000000000000000000000000000000000000000000000000002026 198.0
DYD1_k127_5817478_4 Domain of unknown function (DU1801) - - - 0.0000000000000000000000000000000000000000000000001172 179.0
DYD1_k127_5817977_0 Ribosomal protein S1 K02945 - - 0.0 1069.0
DYD1_k127_5817977_1 PFAM thioesterase superfamily - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000009889 280.0
DYD1_k127_5817977_2 PFAM Phospholipid glycerol acyltransferase - - - 0.00000000000000000000000000000000000000000000007019 173.0
DYD1_k127_5817977_3 Proline dehydrogenase K00318 - - 0.000000000000000000000000000000000172 135.0
DYD1_k127_5829868_0 peptidase S9B dipeptidylpeptidase IV domain protein - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000264 427.0
DYD1_k127_5829868_1 polysaccharide catabolic process K03478 - 3.5.1.105 0.000000000001869 69.0
DYD1_k127_5830043_0 Catalyzes the reversible interconversion of isobutyryl- CoA and n-butyryl-CoA, using radical chemistry. Also exhibits GTPase activity, associated with its G-protein domain (MeaI) that functions as a chaperone that assists cofactor delivery and proper holo-enzyme assembly K11942 - 5.4.99.13 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009882 588.0
DYD1_k127_5830043_1 Psort location Cytoplasmic, score 8.96 - - - 0.00000000000002294 73.0
DYD1_k127_5848109_0 Transaldolase is important for the balance of metabolites in the pentose-phosphate pathway K00616,K08314 - 2.2.1.2 0.000000000000000000000000000000000000000000000000000000000077 205.0
DYD1_k127_5848109_1 - - - - 0.000000000000000000000000000000000000000000000000000001744 201.0
DYD1_k127_5848109_3 Protein of Unknown function (DUF2784) - - - 0.000000000000000000000000000007752 120.0
DYD1_k127_5859805_0 SdiA-regulated - - - 0.0000000000000000000000000000000000000000008526 167.0
DYD1_k127_5859805_1 Metal dependent phosphohydrolases with conserved 'HD' motif. - - - 0.000000000000000000000000000000000005281 141.0
DYD1_k127_5873531_0 PFAM Tetratricopeptide - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002722 347.0
DYD1_k127_5873531_1 AMP binding - - - 0.0000000000000000000001011 107.0
DYD1_k127_5873531_2 Trehalose-phosphatase K16055 - 2.4.1.15,3.1.3.12 0.000000000000000004397 86.0
DYD1_k127_5881793_0 ATPase family associated with various cellular activities (AAA) K03924 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002209 484.0
DYD1_k127_5881793_1 protein (some members contain a von Willebrand factor type A (vWA) domain) - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009143 379.0
DYD1_k127_5886750_0 Tetratricopeptide repeat protein - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001679 399.0
DYD1_k127_5886750_1 PFAM SprT-like family - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000005198 265.0
DYD1_k127_5886750_2 Acetyltransferase (GNAT) domain K03828 - - 0.000000000000000000000000000000000000000000000000000000000000000012 227.0
DYD1_k127_5886750_3 peptidase M23 - - - 0.00000000000000000000000000000000000000000002091 164.0
DYD1_k127_5886750_4 Integral membrane protein CcmA involved in cell shape determination - - - 0.00000000000000000000000000000000000007902 148.0
DYD1_k127_5899624_0 Tricorn protease homolog K08676 - - 0.0 1033.0
DYD1_k127_5899624_1 Tricorn protease homolog K08676 - - 0.0000004734 52.0
DYD1_k127_5907563_0 4-hydroxyphenylpyruvate dioxygenase K00457 - 1.13.11.27 3.245e-212 662.0
DYD1_k127_5907563_1 Belongs to the aspartokinase family K00928 - 2.7.2.4 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001313 574.0
DYD1_k127_5907563_2 ErfK YbiS YcfS YnhG family protein - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001596 416.0
DYD1_k127_5907563_3 Catalyzes the ATP-dependent conversion of 5- aminoimidazole ribonucleotide (AIR) and HCO(3)(-) to N5- carboxyaminoimidazole ribonucleotide (N5-CAIR) K01589 - 6.3.4.18 0.00000000000000000000001498 100.0
DYD1_k127_5916583_0 CarboxypepD_reg-like domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001389 310.0
DYD1_k127_5916583_1 YceI-like domain - - - 0.00000001108 62.0
DYD1_k127_5932518_0 COG1595 DNA-directed RNA polymerase specialized sigma subunit, sigma24 homolog K03088 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001459 304.0
DYD1_k127_5932518_1 Pyrophosphatase that catalyzes the hydrolysis of nucleoside triphosphates to their monophosphate derivatives, with a high preference for the non-canonical purine nucleotides XTP (xanthosine triphosphate), dITP (deoxyinosine triphosphate) and ITP. Seems to function as a house-cleaning enzyme that removes non-canonical purine nucleotides from the nucleotide pool, thus preventing their incorporation into DNA RNA and avoiding chromosomal lesions K02428 GO:0003674,GO:0003824,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006139,GO:0006725,GO:0006753,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0009056,GO:0009058,GO:0009141,GO:0009143,GO:0009987,GO:0016462,GO:0016787,GO:0016817,GO:0016818,GO:0018130,GO:0019438,GO:0019439,GO:0019637,GO:0034404,GO:0034641,GO:0034654,GO:0034655,GO:0044237,GO:0044238,GO:0044248,GO:0044249,GO:0044270,GO:0044271,GO:0044281,GO:0044283,GO:0044424,GO:0044444,GO:0044464,GO:0046434,GO:0046483,GO:0046700,GO:0047429,GO:0055086,GO:0071704,GO:1901292,GO:1901360,GO:1901361,GO:1901362,GO:1901575,GO:1901576 3.6.1.66 0.0000000000000000000000000000000000000000000000000000000000000000000198 237.0
DYD1_k127_5932518_3 Thioesterase-like superfamily - - - 0.000000000000000001184 86.0
DYD1_k127_5946400_0 Fe-S oxidoreductase K18928 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002337 405.0
DYD1_k127_5946400_1 COG2041 Sulfite oxidase K07147 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001833 316.0
DYD1_k127_5946400_2 COGs COG4117 Thiosulfate reductase cytochrome B subunit (membrane anchoring protein) - - - 0.000000000000000000000000000000000000000000000000000000000000000000644 232.0
DYD1_k127_5946400_3 Catalyzes the formation of 6,7-dimethyl-8- ribityllumazine by condensation of 5-amino-6-(D- ribitylamino)uracil with 3,4-dihydroxy-2-butanone 4-phosphate. This is the penultimate step in the biosynthesis of riboflavin K00794 GO:0000906,GO:0003674,GO:0003824,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006766,GO:0006767,GO:0006771,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009110,GO:0009231,GO:0009987,GO:0016740,GO:0016765,GO:0017144,GO:0018130,GO:0034641,GO:0042364,GO:0042726,GO:0042727,GO:0044237,GO:0044249,GO:0044271,GO:0044281,GO:0044283,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0071704,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576 2.5.1.78 0.000000000000000000000000000000000000000000000000000000000000000005118 229.0
DYD1_k127_5950337_0 Belongs to the CinA family K03742,K03743 - 3.5.1.42 0.0000000000000000000000000000000000000000000000000000000000000000000000000000001425 280.0
DYD1_k127_5950337_1 Methionine synthase K00548 - 2.1.1.13 0.00000000000000000000000000000000000002335 158.0
DYD1_k127_6015712_0 Thymidylate kinase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000001072 285.0
DYD1_k127_6015712_1 PFAM Major Facilitator Superfamily - - - 0.0000000000000000000000000000000000000000000000000000000004913 206.0
DYD1_k127_6018368_0 TonB-dependent Receptor Plug Domain - - - 0.0 1365.0
DYD1_k127_6018368_1 Fe2 -dicitrate sensor, membrane component - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000004494 287.0
DYD1_k127_6018368_2 Ragb susd K21572 - - 0.00000000000000000000001512 103.0
DYD1_k127_6026133_0 Fibronectin type III-like domain K05349 - 3.2.1.21 0.0000000000000000000000000000000000000000000000000000000000000000003133 232.0
DYD1_k127_6026133_1 peptidase M1 - - - 0.00000000000000000000000000000000000000005088 156.0
DYD1_k127_6029026_0 elongation factor G domain IV K02355 - - 0.0 1294.0
DYD1_k127_6029026_1 Zinc-dependent metalloprotease - - - 0.0000000000000000000005841 100.0
DYD1_k127_6033114_0 COGs COG5616 integral membrane protein - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004751 449.0
DYD1_k127_6033114_1 Family of unknown function (DUF1028) - - - 0.000000000000000000000000000000000000000000009443 164.0
DYD1_k127_6033114_2 Adenylyl- / guanylyl cyclase, catalytic domain - - - 0.0000000000000000000000001669 123.0
DYD1_k127_6033114_3 XRE family transcriptional regulator K07729 - - 0.0000000000000000000004906 97.0
DYD1_k127_6040920_0 PFAM Pregnancy-associated plasma protein-A - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001149 313.0
DYD1_k127_6040920_1 COG1249 Pyruvate 2-oxoglutarate dehydrogenase complex dihydrolipoamide dehydrogenase (E3) K00382 - 1.8.1.4 0.000000000000000000000000000000000000000000000000000000000000000000000000003537 252.0
DYD1_k127_6040920_2 Glutamine cyclotransferase K00683 - 2.3.2.5 0.0000000000000000000000000000000000000000000000000000000000299 210.0
DYD1_k127_604425_0 Sigma-70 region 2 - - - 0.00000000000000000000000000000000000000000000000000008483 193.0
DYD1_k127_604425_1 - - - - 0.0000000000000004076 86.0
DYD1_k127_6045710_0 COG4452 Inner membrane protein involved in colicin E2 resistance K06143 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004455 356.0
DYD1_k127_6045710_1 membrane - - - 0.000000000000000000000000000000000000000000000000000000006194 204.0
DYD1_k127_6045710_2 Winged helix DNA-binding domain - - - 0.000000000000000000000000000000000000000000000009011 173.0
DYD1_k127_6045710_3 ubiquinone biosynthetic process - - - 0.00000000000000008444 86.0
DYD1_k127_6073006_0 Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released K03086 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006465 337.0
DYD1_k127_6073006_1 - - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000001099 259.0
DYD1_k127_6073006_2 PFAM Transglycosylase SLT domain K08307 - - 0.00000000000000000000000000000000000000000000000003516 186.0
DYD1_k127_6073006_3 heme oxygenase (decyclizing) activity K21481 - 1.14.99.57 0.000000000000000000000000000000003708 131.0
DYD1_k127_6073006_4 - - - - 0.00003134 48.0
DYD1_k127_6073185_0 SPTR Short-chain dehydrogenase reductase SDR - - - 0.00000000000000000000000000000000000000000000000000002043 194.0
DYD1_k127_6073185_1 Glyoxalase bleomycin resistance protein dioxygenase - - - 0.0000000000000000000000000000000000000000004949 166.0
DYD1_k127_6073185_2 chlorophyll binding - - - 0.0000000000000000000007315 99.0
DYD1_k127_6116020_0 DNA ligase K01971 - 6.5.1.1 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004674 375.0
DYD1_k127_6116020_1 PFAM Eukaryotic DNA topoisomerase I, catalytic core K03168 - 5.99.1.2 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001261 379.0
DYD1_k127_6116020_2 Domain of unknown function (DUF2383) - - - 0.0000000000000000000000000000000000000000003533 162.0
DYD1_k127_6116020_3 - - - - 0.000000000000000000000000000000698 124.0
DYD1_k127_6116020_4 Ferredoxin - - - 0.00001996 51.0
DYD1_k127_6117954_0 - - - - 0.000000000000000000000000000000000000000000000000000000000000000000000007024 251.0
DYD1_k127_6117954_1 Protein of unknown function, DUF481 - - - 0.000000000000000000000000000000000000000000000000000000000000000009532 233.0
DYD1_k127_6117954_2 Binding-protein-dependent transport system inner membrane component K02034 - - 0.00000001187 57.0
DYD1_k127_6118055_0 PFAM Penicillin binding protein transpeptidase domain K05366 - 2.4.1.129,3.4.16.4 5.401e-275 857.0
DYD1_k127_6118055_1 Tetratricopeptide repeat protein - - - 0.0000000000000000000000000000000000000000000000000000000000000001231 230.0
DYD1_k127_6123254_0 Transketolase K00615 - 2.2.1.1 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002151 395.0
DYD1_k127_6123254_1 PFAM NAD dependent epimerase dehydratase family K01784 - 5.1.3.2 0.0000000000000000000000000000000003321 132.0
DYD1_k127_614131_0 ABC-type polysaccharide polyol phosphate transport system ATPase component K09691 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002751 414.0
DYD1_k127_614131_1 Oxidoreductase family, C-terminal alpha/beta domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002119 404.0
DYD1_k127_614131_2 Transport permease protein K09690 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006986 364.0
DYD1_k127_614131_3 PFAM Bacterial transferase hexapeptide (three repeats) K13018 - 2.3.1.201 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000002817 297.0
DYD1_k127_614131_4 Catalyzes the formation of dTDP-glucose, from dTTP and glucose 1-phosphate, as well as its pyrophosphorolysis K00973 - 2.7.7.24 0.00000000000000000000000000000000000000009924 151.0
DYD1_k127_6150540_0 Plays an important role in the de novo pathway of purine nucleotide biosynthesis. Catalyzes the first committed step in the biosynthesis of AMP from IMP K01939 GO:0003674,GO:0003824,GO:0004019,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006139,GO:0006163,GO:0006164,GO:0006167,GO:0006725,GO:0006753,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009117,GO:0009123,GO:0009124,GO:0009126,GO:0009127,GO:0009150,GO:0009152,GO:0009156,GO:0009161,GO:0009165,GO:0009167,GO:0009168,GO:0009259,GO:0009260,GO:0009987,GO:0016874,GO:0016879,GO:0017144,GO:0018130,GO:0019438,GO:0019637,GO:0019693,GO:0034641,GO:0034654,GO:0044208,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0044424,GO:0044464,GO:0046033,GO:0046040,GO:0046390,GO:0046483,GO:0055086,GO:0071704,GO:0072521,GO:0072522,GO:0090407,GO:1901135,GO:1901137,GO:1901293,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576 6.3.4.4 2.846e-220 690.0
DYD1_k127_6150540_1 PFAM chorismate binding K01665,K03342 - 2.6.1.85,4.1.3.38 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000727 494.0
DYD1_k127_6150540_2 PFAM Transglycosylase SLT domain K08307 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001578 368.0
DYD1_k127_6150540_3 PKD domain containing protein - - - 0.0000000000000000000000000000000000000000000000000002932 190.0
DYD1_k127_6150540_5 Allows the formation of correctly charged Gln-tRNA(Gln) through the transamidation of misacylated Glu-tRNA(Gln) in organisms which lack glutaminyl-tRNA synthetase. The reaction takes place in the presence of glutamine and ATP through an activated gamma-phospho-Glu-tRNA(Gln) K02433 - 6.3.5.6,6.3.5.7 0.000000000000000000112 89.0
DYD1_k127_6155983_0 SnoaL-like domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001831 524.0
DYD1_k127_6165720_0 Tetratricopeptide repeat - - - 0.00000000000000000000000000000000000000000000000000000034 197.0
DYD1_k127_6165720_1 - - - - 0.00000000000000000000000000000000002231 137.0
DYD1_k127_6165720_2 - - - - 0.0000000000000000008065 87.0
DYD1_k127_6169933_0 peptidase S9 prolyl oligopeptidase active site domain protein - - - 2.25e-209 664.0
DYD1_k127_6169933_1 - - - - 0.00000000007268 62.0
DYD1_k127_6173756_0 Releases the supercoiling and torsional tension of DNA, which is introduced during the DNA replication and transcription, by transiently cleaving and rejoining one strand of the DNA duplex. Introduces a single-strand break via transesterification at a target site in duplex DNA. The scissile phosphodiester is attacked by the catalytic tyrosine of the enzyme, resulting in the formation of a DNA-(5'-phosphotyrosyl)-enzyme intermediate and the expulsion of a 3'-OH DNA strand. The free DNA strand then undergoes passage around the unbroken strand, thus removing DNA supercoils. Finally, in the religation step, the DNA 3'-OH attacks the covalent intermediate to expel the active-site tyrosine and restore the DNA phosphodiester backbone K03168 - 5.99.1.2 0.0 1235.0
DYD1_k127_6173756_1 COG2755 Lysophospholipase L1 and related - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000003702 264.0
DYD1_k127_6173756_2 NADP oxidoreductase coenzyme F420-dependent - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000002461 256.0
DYD1_k127_6173756_3 UbiA prenyltransferase family K03179 - 2.5.1.39 0.000000000000000000000000000000000000000000000000000000000000000005597 229.0
DYD1_k127_6173756_4 Belongs to the small heat shock protein (HSP20) family K13993 - - 0.000000000000000000000000000000000000000000000001607 177.0
DYD1_k127_617763_0 Involved in targeting and insertion of nascent membrane proteins into the cytoplasmic membrane. Binds to the hydrophobic signal sequence of the ribosome-nascent chain (RNC) as it emerges from the ribosomes. The SRP-RNC complex is then targeted to the cytoplasmic membrane where it interacts with the SRP receptor FtsY K03106 - 3.6.5.4 8.457e-203 634.0
DYD1_k127_617763_1 Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released K03086 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001615 485.0
DYD1_k127_617763_2 Pfam Activator of Hsp90 ATPase homolog 1-like protein - - - 0.00000000000000000000000000000000000000000000000000000000000002039 218.0
DYD1_k127_617763_3 - - - - 0.00000000000000000000000000000000000000000000000000006084 194.0
DYD1_k127_6185153_0 Sodium:alanine symporter family K03310 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001157 340.0
DYD1_k127_6185153_1 Belongs to the dicarboxylate amino acid cation symporter (DAACS) (TC 2.A.23) family - - - 0.00000000000000000000000000000000008583 135.0
DYD1_k127_6186691_0 Associates with the EF-Tu.GDP complex and induces the exchange of GDP to GTP. It remains bound to the aminoacyl-tRNA.EF- Tu.GTP complex up to the GTP hydrolysis stage on the ribosome K02357 GO:0003674,GO:0003676,GO:0003723,GO:0003746,GO:0005488,GO:0006412,GO:0006414,GO:0006518,GO:0006807,GO:0008135,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0019538,GO:0034641,GO:0034645,GO:0043043,GO:0043170,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0071704,GO:0097159,GO:1901363,GO:1901564,GO:1901566,GO:1901576 - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002773 469.0
DYD1_k127_6186691_1 Belongs to the universal ribosomal protein uS2 family K02967 GO:0003674,GO:0003735,GO:0005198,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0006412,GO:0006518,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0015935,GO:0019538,GO:0022626,GO:0022627,GO:0032991,GO:0034641,GO:0034645,GO:0043043,GO:0043170,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:0071704,GO:1901564,GO:1901566,GO:1901576,GO:1990904 - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000004775 288.0
DYD1_k127_619809_0 Transfers and isomerizes the ribose moiety from AdoMet to the 7-aminomethyl group of 7-deazaguanine (preQ1-tRNA) to give epoxyqueuosine (oQ-tRNA) K07568 - 2.4.99.17 4.511e-212 660.0
DYD1_k127_6207056_0 PFAM Penicillin binding protein transpeptidase domain K05366 - 2.4.1.129,3.4.16.4 0.00000000000000000000000000000000000000000000000000000000000000000000000002418 256.0
DYD1_k127_6207056_1 PFAM NAD dependent epimerase dehydratase family - - - 0.00000000000000000000000000000000000000000000000000000004845 197.0
DYD1_k127_621377_0 Domain of Unknown Function (DUF1080) - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004145 310.0
DYD1_k127_621377_1 Belongs to the pyruvate kinase family K00873 - 2.7.1.40 0.00000000000000000000000000000000000000000000000000000000000000000000000008381 250.0
DYD1_k127_621377_2 Cytochrome c K08738 - - 0.00000000000000000000000000000002436 128.0
DYD1_k127_621377_3 Protein of unknown function (DUF1761) - - - 0.0000000000000000000005391 100.0
DYD1_k127_6213840_0 Catalyzes the formation of the alpha-1,6-glucosidic linkages in glycogen by scission of a 1,4-alpha-linked oligosaccharide from growing alpha-1,4-glucan chains and the subsequent attachment of the oligosaccharide to the alpha-1,6 position K00700 - 2.4.1.18 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001231 535.0
DYD1_k127_6213840_1 Periplasmic component of the Tol biopolymer transport system - - - 0.00000005565 55.0
DYD1_k127_6234218_0 Cyclic nucleotide-monophosphate binding domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000002271 234.0
DYD1_k127_6234218_1 YceI-like domain - - - 0.00000000000000000000000000000000000000000000000000000000000004451 220.0
DYD1_k127_6245603_0 von Willebrand factor, type A K07114 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001612 387.0
DYD1_k127_6245603_1 Large extracellular alpha-helical protein - - - 0.00000000000000000000000000000000000006203 150.0
DYD1_k127_6248774_0 Subtilase family - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007406 362.0
DYD1_k127_625747_0 Outer membrane protein beta-barrel family - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006353 466.0
DYD1_k127_6262092_0 PFAM Cytochrome c assembly protein K02198 - - 1e-323 1009.0
DYD1_k127_6262092_1 Domain of unknown function (DUF4294) - - - 0.000000000000000000001502 99.0
DYD1_k127_6271894_0 Catalyzes the attachment of glycine to tRNA(Gly) K01880 - 6.1.1.14 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001591 495.0
DYD1_k127_6271894_1 TIGRFAM YihY family protein (not ribonuclease BN) K07058 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001608 347.0
DYD1_k127_6271894_2 rejects L-amino acids rather than detecting D-amino acids in the active site. By recycling D-aminoacyl-tRNA to D-amino acids and free tRNA molecules, this enzyme counteracts the toxicity associated with the formation of D-aminoacyl-tRNA entities in vivo and helps enforce protein L-homochirality K07560 GO:0002161,GO:0003674,GO:0003824,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006139,GO:0006399,GO:0006450,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0009987,GO:0016070,GO:0016787,GO:0016788,GO:0034641,GO:0034660,GO:0043170,GO:0044237,GO:0044238,GO:0044424,GO:0044464,GO:0046483,GO:0051499,GO:0051500,GO:0052689,GO:0065007,GO:0065008,GO:0071704,GO:0090304,GO:0106074,GO:0140098,GO:0140101,GO:1901360 - 0.0000000000000000000000000000000000000000000000000000000000000001711 224.0
DYD1_k127_6271894_3 - - - - 0.00000000000000000000000000000000000000000000000000008089 191.0
DYD1_k127_6271894_4 MazG nucleotide pyrophosphohydrolase domain protein - - - 0.000000000000000000000000000000000000000000001813 167.0
DYD1_k127_6284990_0 TonB dependent receptor - - - 0.0 1150.0
DYD1_k127_6284990_1 ABC transporter K06158 - - 0.00000000000000000000000000000000000000000001312 164.0
DYD1_k127_6284990_2 Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family K02005,K13888 - - 0.00000000000000000000000000000000000004201 150.0
DYD1_k127_6284990_3 CHRD domain - - - 0.0001133 50.0
DYD1_k127_6285914_0 - - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009005 357.0
DYD1_k127_6285914_1 Tetratricopeptide repeat - - - 0.0000000000000000000003986 97.0
DYD1_k127_6285914_2 Trypsin-like serine proteases typically periplasmic contain C-terminal PDZ domain K04771 - 3.4.21.107 0.000001897 57.0
DYD1_k127_6300713_0 PFAM Starch synthase, catalytic domain K00703 - 2.4.1.21 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000065 471.0
DYD1_k127_6300713_1 Catalyzes the condensation of pantoate with beta-alanine in an ATP-dependent reaction via a pantoyl-adenylate intermediate K01918 GO:0003674,GO:0003824,GO:0004592,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006082,GO:0006520,GO:0006573,GO:0006575,GO:0006732,GO:0006766,GO:0006767,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009081,GO:0009108,GO:0009110,GO:0009987,GO:0015939,GO:0015940,GO:0016053,GO:0016874,GO:0016879,GO:0016881,GO:0019752,GO:0032787,GO:0033317,GO:0034641,GO:0042364,GO:0042398,GO:0043436,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0044283,GO:0044424,GO:0044444,GO:0044464,GO:0046394,GO:0051186,GO:0051188,GO:0071704,GO:0072330,GO:1901564,GO:1901566,GO:1901576,GO:1901605 6.3.2.1 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000004121 290.0
DYD1_k127_6300713_2 Domain of unknown function (DUF4270) - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000001775 259.0
DYD1_k127_6300713_3 Lysylphosphatidylglycerol synthase TM region K07027 - - 0.00000000000000000000000000000000000000000000000006038 183.0
DYD1_k127_6301664_0 In eubacteria ppGpp (guanosine 3'-diphosphate 5-' diphosphate) is a mediator of the stringent response that coordinates a variety of cellular activities in response to changes in nutritional abundance K00951,K01139 - 2.7.6.5,3.1.7.2 0.0 1255.0
DYD1_k127_6301664_1 Belongs to the peptidase S8 family - - - 0.00000000000000000000000005499 117.0
DYD1_k127_6315217_0 LAO AO transport system ATPase K07588 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000573 375.0
DYD1_k127_6315217_1 O-Antigen ligase K02847 - - 0.00001442 55.0
DYD1_k127_6316524_0 Endoribonuclease that initiates mRNA decay K18682 - - 2.239e-275 853.0
DYD1_k127_6316524_1 Allows the formation of correctly charged Gln-tRNA(Gln) through the transamidation of misacylated Glu-tRNA(Gln) in organisms which lack glutaminyl-tRNA synthetase. The reaction takes place in the presence of glutamine and ATP through an activated gamma-phospho-Glu-tRNA(Gln) K02433 - 6.3.5.6,6.3.5.7 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005522 561.0
DYD1_k127_6316524_2 This protein is located at the 30S-50S ribosomal subunit interface and may play a role in the structure and function of the aminoacyl-tRNA binding site K02884 GO:0003674,GO:0003735,GO:0005198,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0015934,GO:0022625,GO:0022626,GO:0032991,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:1990904 - 0.00000000000000000000000000000000000000000000000000002521 190.0
DYD1_k127_6316524_3 Part of the twin-arginine translocation (Tat) system that transports large folded proteins containing a characteristic twin-arginine motif in their signal peptide across membranes. TatA could form the protein-conducting channel of the Tat system K03116 - - 0.000000000000000000004107 94.0
DYD1_k127_6327436_0 TonB-dependent receptor - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000495 414.0
DYD1_k127_6327436_1 alkyl hydroperoxide reductase Thiol specific antioxidant Mal allergen - - - 0.00000000000000000000000000000000000000000007418 165.0
DYD1_k127_6327436_2 Heavy-metal-associated domain K08364 - - 0.00000000000000000000000008521 113.0
DYD1_k127_6327436_3 - - - - 0.0000000002297 66.0
DYD1_k127_6328184_0 Phosphoribosylformylglycinamidine cyclo-ligase K01933 - 6.3.3.1 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004989 579.0
DYD1_k127_6328184_1 ABC transporter K09812 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005798 394.0
DYD1_k127_6328184_2 Belongs to the ribF family K11753 - 2.7.1.26,2.7.7.2 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001196 334.0
DYD1_k127_6328184_3 Glycosyl transferases group 1 - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000003809 258.0
DYD1_k127_6328184_4 transferase activity, transferring glycosyl groups - - - 0.000000000000000000000000000000000000000000000000000000000000000000004414 248.0
DYD1_k127_6328184_5 Glycosyl transferase family 2 - - - 0.0000000000000000000000000000000000000000000001166 179.0
DYD1_k127_6328184_6 Glycosyl transferases group 1 - - - 0.000000000000000000000000000000000002472 140.0
DYD1_k127_6328184_7 energy transducer activity K03832 - - 0.0000000000000000000025 100.0
DYD1_k127_6328184_8 Outer membrane protein beta-barrel family - - - 0.000000000000001682 77.0
DYD1_k127_6332055_0 COG0188 Type IIA topoisomerase (DNA gyrase topo II topoisomerase IV) A subunit K02621 - - 5.241e-231 724.0
DYD1_k127_6336318_0 Protein of unknown function (DUF1624) - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007471 310.0
DYD1_k127_6336318_1 PFAM Transcription antitermination protein, NusG, N-terminal - - - 0.00000000000000000000000000000000000000000000000000000000000001556 218.0
DYD1_k127_6336318_2 COG1596 Periplasmic protein involved in polysaccharide export K01991 - - 0.0000000000000000000000002524 112.0
DYD1_k127_6337685_0 Catalyzes the acyloin condensation reaction between C atoms 2 and 3 of pyruvate and glyceraldehyde 3-phosphate to yield 1-deoxy-D-xylulose-5-phosphate (DXP) K01662 - 2.2.1.7 4.117e-227 707.0
DYD1_k127_6337685_1 Histidine kinase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000752 359.0
DYD1_k127_6337685_2 Two component transcriptional regulator, LytTR family K02477 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007451 331.0
DYD1_k127_6345160_0 Flavin transferase that catalyzes the transfer of the FMN moiety of FAD and its covalent binding to the hydroxyl group of a threonine residue in a target flavoprotein K03734 - 2.7.1.180 0.00000000000000000000000000000000000000000000000000004689 197.0
DYD1_k127_6345160_1 Protein of unknown function, DUF255 - - - 0.00000000000000000000000001799 112.0
DYD1_k127_637391_0 - - - - 0.000000000000000000000000000000000000000000000000000000002891 207.0
DYD1_k127_637391_1 - - - - 0.000000000000000000000000000000001073 135.0
DYD1_k127_637391_2 - - - - 0.000000000000000001527 90.0
DYD1_k127_6378508_0 Catalyzes the attachment of proline to tRNA(Pro) in a two-step reaction proline is first activated by ATP to form Pro- AMP and then transferred to the acceptor end of tRNA(Pro) K01881 GO:0003674,GO:0003824,GO:0004812,GO:0004827,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006082,GO:0006139,GO:0006399,GO:0006412,GO:0006418,GO:0006433,GO:0006518,GO:0006520,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0016070,GO:0016874,GO:0016875,GO:0017101,GO:0019538,GO:0019752,GO:0032991,GO:0034641,GO:0034645,GO:0034660,GO:0043038,GO:0043039,GO:0043043,GO:0043170,GO:0043436,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044281,GO:0044424,GO:0044464,GO:0046483,GO:0071704,GO:0090304,GO:0140098,GO:0140101,GO:1901360,GO:1901564,GO:1901566,GO:1901576 6.1.1.15 1.773e-275 852.0
DYD1_k127_6378508_1 pfam rdd - - - 0.000000000000000000000000000000000000000000000001028 179.0
DYD1_k127_6378508_2 Family of unknown function (DUF5362) - - - 0.0000000000001774 77.0
DYD1_k127_6378508_3 - - - - 0.0000000006096 66.0
DYD1_k127_6378508_4 - - - - 0.00000002468 57.0
DYD1_k127_6383143_0 Two component regulator propeller domain protein - - - 1.269e-266 841.0
DYD1_k127_6383143_1 Peptide chain release factor 1 directs the termination of translation in response to the peptide chain termination codons UAG and UAA K02835 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001499 583.0
DYD1_k127_6383143_10 Outer membrane protein beta-barrel family - - - 0.00000000000000000001118 100.0
DYD1_k127_6383143_11 - - - - 0.0004649 52.0
DYD1_k127_6383143_2 amidohydrolase K20810 - 3.5.4.40 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006851 359.0
DYD1_k127_6383143_3 of the RND superfamily K07003 - - 0.0000000000000000000000000000000000000000000000000000000000000000001919 237.0
DYD1_k127_6383143_4 Involved in DNA repair and RecF pathway recombination K03584 - - 0.00000000000000000000000000000000000000000000000000000000000000000166 230.0
DYD1_k127_6383143_5 TIGRFAM RNA polymerase sigma factor, sigma-70 family K03088 - - 0.00000000000000000000000000000000000000000000000000000000000004142 218.0
DYD1_k127_6383143_6 The glycine cleavage system catalyzes the degradation of glycine. The H protein shuttles the methylamine group of glycine from the P protein to the T protein K02437 - - 0.0000000000000000000000000000000000000000000000000000001149 198.0
DYD1_k127_6383143_7 Anti-sigma-K factor rskA - - - 0.00000000000000000000000000000000000000000000004019 178.0
DYD1_k127_6383143_8 Involved in DNA repair and RecF pathway recombination K03584 - - 0.000000000000000000000000003845 112.0
DYD1_k127_6383143_9 Psort location CytoplasmicMembrane, score - - - 0.000000000000000000000000005479 114.0
DYD1_k127_6387566_0 Responsible for synthesis of pseudouridine from uracil K06180 - 5.4.99.23 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001069 529.0
DYD1_k127_6387566_1 Nucleotidyl transferase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000108 437.0
DYD1_k127_6387566_2 Catalyzes the transfer of endogenously produced octanoic acid from octanoyl-acyl-carrier-protein onto the lipoyl domains of lipoate-dependent enzymes. Lipoyl-ACP can also act as a substrate although octanoyl-ACP is likely to be the physiological substrate K03801 GO:0003674,GO:0003824,GO:0006464,GO:0006807,GO:0008150,GO:0008152,GO:0009249,GO:0009987,GO:0010467,GO:0016740,GO:0016746,GO:0016747,GO:0018065,GO:0018193,GO:0018205,GO:0019538,GO:0033819,GO:0036211,GO:0043170,GO:0043412,GO:0044237,GO:0044238,GO:0044260,GO:0044267,GO:0051604,GO:0071704,GO:1901564 2.3.1.181 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005036 334.0
DYD1_k127_6387566_3 - - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003132 301.0
DYD1_k127_6387566_4 1-aminocyclopropane-1-carboxylate deaminase K01505 - 3.5.99.7 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000001074 289.0
DYD1_k127_6387566_5 peptidase S1 and S6 chymotrypsin Hap - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000005378 271.0
DYD1_k127_6388783_0 Required for accurate and efficient protein synthesis under certain stress conditions. May act as a fidelity factor of the translation reaction, by catalyzing a one-codon backward translocation of tRNAs on improperly translocated ribosomes. Back- translocation proceeds from a post-translocation (POST) complex to a pre-translocation (PRE) complex, thus giving elongation factor G a second chance to translocate the tRNAs correctly. Binds to ribosomes in a GTP-dependent manner K03596 - - 4.89e-273 848.0
DYD1_k127_6396241_0 calcium- and calmodulin-responsive adenylate cyclase activity K01406 - 3.4.24.40 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005739 336.0
DYD1_k127_6396241_1 Ribonuclease H-like K09776 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000001234 287.0
DYD1_k127_6402460_0 Mandelate racemase muconate lactonizing enzyme K19802 GO:0000287,GO:0003674,GO:0003824,GO:0005488,GO:0006518,GO:0006807,GO:0008150,GO:0008152,GO:0009987,GO:0016853,GO:0016854,GO:0034641,GO:0043167,GO:0043169,GO:0043603,GO:0044237,GO:0046872,GO:0071704,GO:1901564 5.1.1.20 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007628 477.0
DYD1_k127_6402699_0 Belongs to the class-I aminoacyl-tRNA synthetase family K01869 GO:0003674,GO:0003824,GO:0004812,GO:0004823,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006082,GO:0006139,GO:0006399,GO:0006412,GO:0006418,GO:0006429,GO:0006518,GO:0006520,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0016070,GO:0016874,GO:0016875,GO:0019538,GO:0019752,GO:0034641,GO:0034645,GO:0034660,GO:0043038,GO:0043039,GO:0043043,GO:0043170,GO:0043436,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044281,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0071704,GO:0090304,GO:0140098,GO:0140101,GO:1901360,GO:1901564,GO:1901566,GO:1901576 6.1.1.4 5.516e-224 702.0
DYD1_k127_6402699_1 Belongs to the ABC-4 integral membrane protein family. FtsX subfamily K09811 GO:0005575,GO:0005618,GO:0005623,GO:0006928,GO:0008150,GO:0009274,GO:0009276,GO:0009605,GO:0009607,GO:0009615,GO:0009987,GO:0030312,GO:0030313,GO:0031975,GO:0040011,GO:0043207,GO:0044464,GO:0048870,GO:0050896,GO:0051179,GO:0051301,GO:0051674,GO:0051704,GO:0051707,GO:0071944,GO:0071976 - 0.000000006527 60.0
DYD1_k127_640302_0 OmpA family - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001116 379.0
DYD1_k127_640302_1 Beta-lactamase - - - 0.000000002258 64.0
DYD1_k127_640532_0 CobQ CobB MinD ParA nucleotide binding domain K03496 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003507 460.0
DYD1_k127_640532_1 23S rRNA-intervening sequence protein - - - 0.000000000000000000000000000000000000001312 151.0
DYD1_k127_640532_2 Belongs to the UPF0173 family - - - 0.0005809 42.0
DYD1_k127_6406384_0 AsmA-like C-terminal region - - - 0.00000000000000000000000000000000000000000000000000000000000001829 229.0
DYD1_k127_6406384_1 Outer membrane protein beta-barrel domain - - - 0.000000002678 61.0
DYD1_k127_6421053_0 Cupin 2, conserved barrel domain protein K21700 - - 0.0000000003885 65.0
DYD1_k127_6421053_1 Caspase domain - - - 0.000001469 53.0
DYD1_k127_6428502_0 Peptidase, M28 - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000539 469.0
DYD1_k127_6460810_0 FIST N domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001945 608.0
DYD1_k127_6460810_1 FIST N domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000202 551.0
DYD1_k127_6460810_2 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003706 482.0
DYD1_k127_6460810_3 Histidine kinase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005271 476.0
DYD1_k127_6460810_4 Histidine kinase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005168 455.0
DYD1_k127_6460810_5 FIST N domain - - - 0.00000000000000000000000000000000000000000000000000000000000000001558 229.0
DYD1_k127_6462150_0 SNF2 family N-terminal domain K08282 - 2.7.11.1 0.0 1790.0
DYD1_k127_6462150_1 receptor - - - 5.009e-289 916.0
DYD1_k127_6462150_2 The glycine cleavage system catalyzes the degradation of glycine K00605 - 2.1.2.10 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008582 387.0
DYD1_k127_6462150_3 Belongs to the ComB family K05979 - 3.1.3.71 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002583 372.0
DYD1_k127_6462150_4 Cell division protein - - - 0.000000000000000000000000000000000000000000000000000000009631 202.0
DYD1_k127_6462150_5 Outer membrane protein beta-barrel family - - - 0.00000000000000005552 83.0
DYD1_k127_646239_0 amino acid K03294 - - 9.438e-247 769.0
DYD1_k127_646239_1 transcriptional regulatory protein - GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0044424,GO:0044444,GO:0044464 - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005841 417.0
DYD1_k127_646239_2 alanine symporter K03310 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000492 321.0
DYD1_k127_6470455_0 Flavin containing amine oxidoreductase K00274 - 1.4.3.4 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006616 606.0
DYD1_k127_6470455_1 - - - - 0.0000000000000000000000000000000000000005941 158.0
DYD1_k127_6470455_2 - - - - 0.0000000004555 64.0
DYD1_k127_6470455_3 YtxH-like protein - - - 0.00000001037 59.0
DYD1_k127_6470455_4 Putative Actinobacterial Holin-X, holin superfamily III - - - 0.00001613 51.0
DYD1_k127_6471542_0 Outer membrane protein beta-barrel family - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002818 432.0
DYD1_k127_6471953_0 Histidine kinase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000006757 284.0
DYD1_k127_6471953_1 COG2197 Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain - - - 0.000000000000000000000000000000000000000000000000000000000000000009644 230.0
DYD1_k127_6471953_2 Catalyzes the acyloin condensation reaction between C atoms 2 and 3 of pyruvate and glyceraldehyde 3-phosphate to yield 1-deoxy-D-xylulose-5-phosphate (DXP) K01662 - 2.2.1.7 0.0000000000000000000000000000000000000003875 150.0
DYD1_k127_6474965_0 Critical role in recombination and DNA repair. Helps process Holliday junction intermediates to mature products by catalyzing branch migration. Has a DNA unwinding activity characteristic of a DNA helicase with a 3'- to 5'- polarity. Unwinds branched duplex DNA (Y-DNA) K03655 - 3.6.4.12 3.793e-306 952.0
DYD1_k127_6474965_1 Glycosyl transferase family group 2 - - - 0.0000000000000000000000000000000000000000007021 162.0
DYD1_k127_6474965_2 C-terminal domain of CHU protein family - - - 0.0000000004025 65.0
DYD1_k127_6478945_0 His Kinase A (phosphoacceptor) domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006296 306.0
DYD1_k127_6478945_1 Protein of unknown function (DUF983) - - - 0.000000000000000000000000000000000000000000000000000000000000008612 218.0
DYD1_k127_6478945_2 DNA-templated transcription, initiation K03088 - - 0.000000000000000000000002501 111.0
DYD1_k127_6478945_3 receptor - - - 0.0000000114 56.0
DYD1_k127_6478945_4 Endonuclease containing a URI domain K07461 - - 0.000005772 51.0
DYD1_k127_6478945_5 Resolvase - - - 0.00002461 49.0
DYD1_k127_6480572_0 von Willebrand factor, type A K07114 - - 0.00000000000000000000000000000000000000000000000000000000000000000001623 239.0
DYD1_k127_6480572_1 protein (some members contain a von Willebrand factor type A (vWA) domain) - - - 0.0000000000000000000000000000000000000000000000000000000000000000003566 231.0
DYD1_k127_6480572_2 cytochrome complex assembly K02198,K02200,K04016,K04017,K04018 GO:0003674,GO:0003824,GO:0005575,GO:0005623,GO:0005886,GO:0006464,GO:0006807,GO:0008150,GO:0008152,GO:0009897,GO:0009986,GO:0009987,GO:0015035,GO:0015036,GO:0016020,GO:0016043,GO:0016491,GO:0016667,GO:0017003,GO:0017004,GO:0017006,GO:0018063,GO:0018193,GO:0018198,GO:0018378,GO:0019538,GO:0022607,GO:0031224,GO:0031226,GO:0031233,GO:0031237,GO:0034622,GO:0036211,GO:0043170,GO:0043412,GO:0043933,GO:0044085,GO:0044237,GO:0044238,GO:0044260,GO:0044267,GO:0044425,GO:0044459,GO:0044464,GO:0055114,GO:0065003,GO:0071704,GO:0071840,GO:0071944,GO:0098552,GO:0098567,GO:1901564 - 0.0000000000000000000000000000000000000006238 160.0
DYD1_k127_6480572_3 protein (some members contain a von Willebrand factor type A (vWA) domain) - - - 0.00000000000006619 72.0
DYD1_k127_6482035_0 Catalyzes the reduction of ribonucleotides to deoxyribonucleotides. May function to provide a pool of deoxyribonucleotide precursors for DNA repair during oxygen limitation and or for immediate growth after restoration of oxygen K00525 - 1.17.4.1 0.0 1932.0
DYD1_k127_6482035_1 Prenyltransferase that catalyzes the transfer of the geranylgeranyl moiety of geranylgeranyl diphosphate (GGPP) to the C3 hydroxyl of sn-glycerol-1-phosphate (G1P) K07094 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001777 407.0
DYD1_k127_6482035_2 Peptidase, M28 - - - 0.00000000000000000000000000000000000000000001295 164.0
DYD1_k127_6482035_3 DNA mediated transformation - - - 0.00007879 54.0
DYD1_k127_6483021_0 Sortilin, neurotensin receptor 3, - - - 0.0 1219.0
DYD1_k127_6488300_0 Belongs to the cation diffusion facilitator (CDF) transporter (TC 2.A.4) family - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001174 330.0
DYD1_k127_6488300_1 Permease, YjgP YjgQ family K07091 - - 0.000000000000000000000000000000000000000000000000000000000000000000000002598 253.0
DYD1_k127_6504762_0 Fatty acid hydroxylase superfamily - - - 2.932e-199 627.0
DYD1_k127_6504762_1 DinB superfamily - - - 0.000000000002365 68.0
DYD1_k127_6507169_0 PFAM RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) - - - 0.0000000000000000000000000000003483 124.0
DYD1_k127_6507169_1 DinB family - - - 0.00000000000000002581 84.0
DYD1_k127_6510731_0 Zn-dependent dipeptidase, microsomal dipeptidase - - - 0.00000000000000000000000000000000000000000001011 168.0
DYD1_k127_6510731_1 Protein of unknown function (DUF456) K09793 - - 0.000000000000000000000000000000000000000001082 161.0
DYD1_k127_6516537_0 COGs COG0664 cAMP-binding protein - catabolite gene activator and regulatory subunit of cAMP-dependent protein kinase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007444 559.0
DYD1_k127_6516537_1 PFAM Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004886 397.0
DYD1_k127_6516537_2 COG1188 Ribosome-associated heat shock protein implicated in the recycling of the 50S subunit (S4 paralog) K04762 - - 0.000000000000000000000000000000000000000000000000000001922 193.0
DYD1_k127_6516537_3 Belongs to the small heat shock protein (HSP20) family K13993 - - 0.0000000000000000000000000000001093 128.0
DYD1_k127_6516537_4 Peptidase, family M20 M25 M40 - - - 0.0000000000000000000000004166 104.0
DYD1_k127_651693_0 polysaccharide biosynthetic process - - - 0.000000000000000000000000000000008118 143.0
DYD1_k127_6517055_0 DNA polymerase III, epsilon subunit K02342 - 2.7.7.7 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002063 526.0
DYD1_k127_6517055_1 PFAM Major Facilitator Superfamily - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009754 472.0
DYD1_k127_6517055_2 Domain amino terminal to FKBP-type peptidyl-prolyl isomerase K03773 - 5.2.1.8 0.000000000000000000000000000000000000000000000000000000001224 209.0
DYD1_k127_6517055_3 Thioesterase-like superfamily K07107 - - 0.00000000000000000000000000000000000000000003427 164.0
DYD1_k127_6517055_4 ABC transporter K15738 - - 0.0000000000000000000000000000000000000000003428 161.0
DYD1_k127_6517055_5 Activator of Hsp90 ATPase 1 family protein - - - 0.0002458 47.0
DYD1_k127_6526275_0 Peptidase S46 - GO:0003674,GO:0003824,GO:0004177,GO:0006508,GO:0006518,GO:0006807,GO:0008150,GO:0008152,GO:0008233,GO:0008238,GO:0008239,GO:0009056,GO:0009987,GO:0016787,GO:0019538,GO:0034641,GO:0043170,GO:0043171,GO:0043603,GO:0044237,GO:0044238,GO:0044248,GO:0070011,GO:0071704,GO:0140096,GO:1901564,GO:1901565,GO:1901575 - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002471 367.0
DYD1_k127_6526275_1 peptidylprolyl isomerase K01802,K03770 - 5.2.1.8 0.000000000000000000000000000000000000000000000000000000000002224 218.0
DYD1_k127_6527017_0 transferase activity, transferring glycosyl groups - - - 0.000000000000000004358 94.0
DYD1_k127_6527017_1 Polysaccharide biosynthesis protein - - - 0.00000000001563 74.0
DYD1_k127_6531019_0 Phosphate starvation-inducible protein PhoH K06217 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001157 577.0
DYD1_k127_6531019_1 Belongs to the LDH2 MDH2 oxidoreductase family - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001665 559.0
DYD1_k127_6531019_2 single-stranded DNA-binding protein K03111 - - 0.000000000000000000000000000000000000000000000000000003387 194.0
DYD1_k127_6531019_3 Belongs to the aspartokinase family K00928 - 2.7.2.4 0.0000000000000000000000000000000000000000000005885 168.0
DYD1_k127_6531019_4 Important for reducing fluoride concentration in the cell, thus reducing its toxicity K06199 - - 0.0000000000000000000000000000000004442 134.0
DYD1_k127_6531019_5 acr, cog1993 K06199,K09137 - - 0.00000000000000000000000000000001721 129.0
DYD1_k127_6541469_0 Destroys radicals which are normally produced within the cells and which are toxic to biological systems K04564 - 1.15.1.1 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001293 377.0
DYD1_k127_6541469_1 Protein of unknown function (DUF1211) - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000002582 251.0
DYD1_k127_6541469_2 Catalyzes the deamination of adenosine to inosine at the wobble position 34 of tRNA(Arg2) K11991 - 3.5.4.33 0.0000000000000000000000000000000000000000000000002531 177.0
DYD1_k127_6541469_4 Catalyzes the deamination of adenosine to inosine at the wobble position 34 of tRNA(Arg2) K11991 - 3.5.4.33 0.00000000002032 64.0
DYD1_k127_6541469_5 Histidine kinase - - - 0.00000000002121 70.0
DYD1_k127_6541469_6 Histidine kinase - - - 0.0000001407 60.0
DYD1_k127_6546697_0 Provides the (R)-glutamate required for cell wall biosynthesis K01776 - 5.1.1.3 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002442 440.0
DYD1_k127_6546697_1 C-terminal domain of CHU protein family - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000003342 263.0
DYD1_k127_6548406_0 ASPIC and UnbV - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003339 628.0
DYD1_k127_6548406_1 Transcriptional regulatory protein, C terminal - - - 0.0000000000000000000000000001413 114.0
DYD1_k127_655513_0 Required for chromosome condensation and partitioning K03529 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004319 576.0
DYD1_k127_655513_1 alkyl hydroperoxide reductase - - - 0.000000000000000000000000001431 116.0
DYD1_k127_6556604_0 Protein of unknown function (DUF1343) - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000484 520.0
DYD1_k127_6556604_1 PFAM Bacterial Fmu (Sun) eukaryotic nucleolar NOL1 Nop2p - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000823 504.0
DYD1_k127_6556604_2 Attaches a formyl group to the free amino group of methionyl-tRNA(fMet). The formyl group appears to play a dual role in the initiator identity of N-formylmethionyl-tRNA by promoting its recognition by IF2 and preventing the misappropriation of this tRNA by the elongation apparatus K00604 GO:0003674,GO:0003824,GO:0004479,GO:0006139,GO:0006396,GO:0006399,GO:0006400,GO:0006412,GO:0006413,GO:0006464,GO:0006518,GO:0006725,GO:0006807,GO:0008033,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009451,GO:0009987,GO:0010467,GO:0016070,GO:0016740,GO:0016741,GO:0016742,GO:0019538,GO:0019988,GO:0034470,GO:0034641,GO:0034645,GO:0034660,GO:0036211,GO:0043043,GO:0043170,GO:0043412,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0046483,GO:0071704,GO:0071951,GO:0090304,GO:0140098,GO:0140101,GO:1901360,GO:1901564,GO:1901566,GO:1901576 2.1.2.9 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002008 433.0
DYD1_k127_6556604_3 The transhydrogenation between NADH and NADP is coupled to respiration and ATP hydrolysis and functions as a proton pump across the membrane K00325 - 1.6.1.2 0.000000000000000000000000000000000000000000008462 163.0
DYD1_k127_6556604_4 LysM domain K01449 - 3.5.1.28 0.0000000000000000000000000000000000000000001658 171.0
DYD1_k127_6556604_5 Peptidyl-prolyl cis-trans isomerase K01802,K03774,K03775 - 5.2.1.8 0.00000000000000000000000000000000003801 135.0
DYD1_k127_6562610_0 (ABC) transporter K02021,K06147,K06148,K11085 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007969 338.0
DYD1_k127_6562610_1 -O-antigen - - - 0.0000002968 53.0
DYD1_k127_6564517_0 - - - - 0.0000000000000000000000000001078 122.0
DYD1_k127_6564517_1 Methyltransferase domain - - - 0.00000000002085 69.0
DYD1_k127_6564517_2 Domain of unknown function (DUF4382) - - - 0.000001989 50.0
DYD1_k127_656475_0 L,D-transpeptidase catalytic domain K21470 - - 0.00000000000000000000000000000000000001005 148.0
DYD1_k127_656475_1 Lytic transglycosylase with a strong preference for naked glycan strands that lack stem peptides K03642 - - 0.0000000000000000000000000000001785 125.0
DYD1_k127_656475_2 Belongs to the ompA family - - - 0.000000000000000000008151 95.0
DYD1_k127_6574688_0 Methyltransferase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001708 594.0
DYD1_k127_6574688_1 Dioxygenase - - - 0.0000000003064 61.0
DYD1_k127_6578066_0 domain, Protein - - - 1.86e-232 725.0
DYD1_k127_6578066_1 Histidine kinase K07636 - 2.7.13.3 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006848 490.0
DYD1_k127_6578066_2 Transglutaminase-like - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002757 476.0
DYD1_k127_6578066_3 TonB-dependent receptor - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000344 396.0
DYD1_k127_6578066_4 COG0745 Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain K07658 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001016 343.0
DYD1_k127_6582155_0 Belongs to the peptidase M24B family K01262 - 3.4.11.9 3.818e-237 738.0
DYD1_k127_6582155_1 Belongs to the CDP-alcohol phosphatidyltransferase class-I family K17103 - 2.7.8.8 0.0000000000000000000000000000000000000000000000000000000000000000000000000000004549 272.0
DYD1_k127_6582155_2 Part of the phosphoribosylformylglycinamidine synthase complex involved in the purines biosynthetic pathway. Catalyzes the ATP-dependent conversion of formylglycinamide ribonucleotide (FGAR) and glutamine to yield formylglycinamidine ribonucleotide (FGAM) and glutamate. The FGAM synthase complex is composed of three subunits. PurQ produces an ammonia molecule by converting glutamine to glutamate. PurL transfers the ammonia molecule to FGAR to form FGAM in an ATP-dependent manner. PurS interacts with PurQ and PurL and is thought to assist in the transfer of the ammonia molecule from PurQ to PurL K01952 - 6.3.5.3 0.000000000000000000000000000000137 127.0
DYD1_k127_6582155_3 Catalyzes the 2'-O-methylation of the ribose of cytidine 1402 (C1402) in 16S rRNA K07056 - 2.1.1.198 0.000000000000472 69.0
DYD1_k127_6584596_0 3-Deoxy-D-manno-octulosonic-acid transferase K02527 - 2.4.99.12,2.4.99.13,2.4.99.14,2.4.99.15 0.00000000000000000000000000000000000000000000000000000000000000000000000002564 256.0
DYD1_k127_6584596_1 outer membrane lipoprotein carrier protein LolA K03634 - - 0.000000000000000000000000003279 112.0
DYD1_k127_6593463_0 ATP-dependent specificity component of the Clp protease. It directs the protease to specific substrates. Can perform chaperone functions in the absence of ClpP K03544 GO:0000166,GO:0003674,GO:0003824,GO:0004176,GO:0005488,GO:0005524,GO:0006508,GO:0006807,GO:0008144,GO:0008150,GO:0008152,GO:0008233,GO:0009056,GO:0009057,GO:0009987,GO:0016462,GO:0016787,GO:0016817,GO:0016818,GO:0016887,GO:0017076,GO:0017111,GO:0019538,GO:0030163,GO:0030554,GO:0032553,GO:0032555,GO:0032559,GO:0035639,GO:0036094,GO:0042623,GO:0043167,GO:0043168,GO:0043170,GO:0044238,GO:0051301,GO:0070011,GO:0071704,GO:0097159,GO:0097367,GO:0140096,GO:1901265,GO:1901363,GO:1901564,GO:1901565,GO:1901575 - 6.237e-227 708.0
DYD1_k127_6593463_1 IMG reference gene - - - 0.00000000000000000000000000004046 132.0
DYD1_k127_6593463_2 Membrane - - - 0.0000000000000000000004685 99.0
DYD1_k127_6593463_3 Cleaves peptides in various proteins in a process that requires ATP hydrolysis. Has a chymotrypsin-like activity. Plays a major role in the degradation of misfolded proteins - - - 0.000000000000000008526 83.0
DYD1_k127_6598114_0 COG0308 Aminopeptidase N - - - 1.223e-312 968.0
DYD1_k127_6598114_1 P-loop ATPase protein family - - - 1.099e-239 749.0
DYD1_k127_6598114_2 Catalyzes the reversible interconversion of isobutyryl- CoA and n-butyryl-CoA, using radical chemistry. Also exhibits GTPase activity, associated with its G-protein domain (MeaI) that functions as a chaperone that assists cofactor delivery and proper holo-enzyme assembly K11942 - 5.4.99.13 1.065e-222 698.0
DYD1_k127_6598114_3 - - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008783 474.0
DYD1_k127_6598114_4 cellulose binding - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002169 477.0
DYD1_k127_6598114_5 COG1208 Nucleoside-diphosphate-sugar pyrophosphorylase involved in lipopolysaccharide biosynthesis translation initiation factor 2B, gamma epsilon subunits (eIF-2Bgamma eIF-2Bepsilon) - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007362 325.0
DYD1_k127_6598114_6 Belongs to the glycosyl hydrolase 8 (cellulase D) family - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000002142 295.0
DYD1_k127_6598114_7 Polyketide cyclase / dehydrase and lipid transport - - - 0.000000000000000000000000000000000000000004162 159.0
DYD1_k127_6598114_8 Protein of unknown function (DUF4199) - - - 0.000000000000000000000000000000000003977 143.0
DYD1_k127_6598114_9 LuxR family transcriptional regulator - - - 0.00000000000000000000000000000000001441 141.0
DYD1_k127_6601037_0 Belongs to the class I-like SAM-binding methyltransferase superfamily. RsmB NOP family K03500 - 2.1.1.176 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001526 442.0
DYD1_k127_6601037_1 PFAM Di-glucose binding within endoplasmic reticulum - - - 0.000718 48.0
DYD1_k127_6640944_0 DeoC/LacD family aldolase K11645 - 4.1.2.13 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002186 500.0
DYD1_k127_6640944_1 PFAM periplasmic binding protein - - - 0.0000000000000000000000000000000000000000000000000000000000000154 220.0
DYD1_k127_6643390_0 PFAM Gamma-glutamyltranspeptidase K00681 - 2.3.2.2,3.4.19.13 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000882 613.0
DYD1_k127_6643390_1 Protein of unknown function (DUF1572) - - - 0.00000000116 61.0
DYD1_k127_664730_0 Catalyzes the irreversible transfer of a propylamine group from the amino donor S-adenosylmethioninamine (decarboxy- AdoMet) to putrescine (1,4-diaminobutane) to yield spermidine - - - 3.174e-296 929.0
DYD1_k127_664730_1 Glycosyl hydrolase-like 10 - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008508 399.0
DYD1_k127_664730_2 Catalyzes the methyl esterification of L-isoaspartyl residues in peptides and proteins that result from spontaneous decomposition of normal L-aspartyl and L-asparaginyl residues. It plays a role in the repair and or degradation of damaged proteins K00573 - 2.1.1.77 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000325 302.0
DYD1_k127_664730_3 PFAM ABC transporter related K06147 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000004803 273.0
DYD1_k127_664730_4 Protein of unknown function (DUF664) - - - 0.000000000000000000000000000000000000000000000000002859 186.0
DYD1_k127_6647602_0 Nitroreductase family - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004674 340.0
DYD1_k127_6647602_1 Peptidase family M1 domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000001242 245.0
DYD1_k127_6647602_2 Catalyzes the 2'-O-methylation of the ribose of cytidine 1402 (C1402) in 16S rRNA K07056 - 2.1.1.198 0.00000000889 58.0
DYD1_k127_6657342_0 Transcriptional regulator - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000954 576.0
DYD1_k127_6657951_0 PFAM Aminotransferase class I and II K00812 - 2.6.1.1 4.04e-202 638.0
DYD1_k127_6657951_1 Glycosyl transferase family 1 - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009655 346.0
DYD1_k127_6657951_4 - - - - 0.0001104 48.0
DYD1_k127_6696211_0 PFAM Tetratricopeptide repeat - - - 5.033e-217 683.0
DYD1_k127_6696211_1 PFAM (2R)-phospho-3-sulfolactate synthase ComA K08097 - 4.4.1.19 0.000000000000000000000000000000000000000000000000000000000001267 210.0
DYD1_k127_6699684_0 Produces ATP from ADP in the presence of a proton gradient across the membrane. The gamma chain is believed to be important in regulating ATPase activity and the flow of protons through the CF(0) complex K02115 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000142 454.0
DYD1_k127_6699684_1 Participates in chromosomal partition during cell division. May act via the formation of a condensin-like complex containing Smc and ScpA that pull DNA away from mid-cell into both cell halves K06024 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000004749 293.0
DYD1_k127_6699684_2 Part of the Sec protein translocase complex. Interacts with the SecYEG preprotein conducting channel. Has a central role in coupling the hydrolysis of ATP to the transfer of proteins into and across the cell membrane, serving as an ATP-driven molecular motor driving the stepwise translocation of polypeptide chains across the membrane K03070 GO:0000166,GO:0003674,GO:0003824,GO:0005215,GO:0005488,GO:0005524,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005886,GO:0005887,GO:0006810,GO:0008104,GO:0008144,GO:0008150,GO:0008320,GO:0008565,GO:0015031,GO:0015399,GO:0015405,GO:0015440,GO:0015450,GO:0015462,GO:0015833,GO:0016020,GO:0016021,GO:0016462,GO:0016787,GO:0016817,GO:0016818,GO:0016887,GO:0017076,GO:0017111,GO:0022804,GO:0022857,GO:0022884,GO:0030554,GO:0031224,GO:0031226,GO:0031522,GO:0032553,GO:0032555,GO:0032559,GO:0032991,GO:0033036,GO:0033220,GO:0035639,GO:0036094,GO:0042623,GO:0042626,GO:0042886,GO:0042887,GO:0043167,GO:0043168,GO:0043492,GO:0043952,GO:0044424,GO:0044425,GO:0044444,GO:0044459,GO:0044464,GO:0045184,GO:0051179,GO:0051234,GO:0055085,GO:0071702,GO:0071705,GO:0071806,GO:0071944,GO:0097159,GO:0097367,GO:1901265,GO:1901363,GO:1904680 - 0.0000000000000000000000000001194 117.0
DYD1_k127_670316_0 Di-iron-containing protein involved in the repair of iron-sulfur clusters K07322 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000008505 284.0
DYD1_k127_670316_1 Cytochrome c - - - 0.000000000000000000000000000000000000000000000000000000000005671 210.0
DYD1_k127_670316_2 Cytochrome c - - - 0.0000000000000000000000000000000000000000000000000000007951 209.0
DYD1_k127_670316_3 Cytochrome c - - - 0.0000000000000000000000000000000000000000000000000000008359 196.0
DYD1_k127_670316_4 Transcriptional regulator - - - 0.000000000000000000000000000003703 124.0
DYD1_k127_670316_5 Has lipid A 3-O-deacylase activity. Hydrolyzes the ester bond at the 3 position of lipid A, a bioactive component of lipopolysaccharide (LPS), thereby releasing the primary fatty acyl moiety - - - 0.000000000000000000001048 98.0
DYD1_k127_670316_6 YceI-like domain - - - 0.00000000000000002154 92.0
DYD1_k127_670316_7 Cytochrome c - - - 0.000008166 53.0
DYD1_k127_670589_0 amino acids such as valine, to avoid such errors it has two additional distinct tRNA(Ile)-dependent editing activities. One activity is designated as 'pretransfer' editing and involves the hydrolysis of activated Val-AMP. The other activity is designated 'posttransfer' editing and involves deacylation of mischarged Val-tRNA(Ile) K01870 - 6.1.1.5 0.0 1754.0
DYD1_k127_670589_1 TonB dependent receptor K16089 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003447 550.0
DYD1_k127_670589_2 TonB dependent receptor K16091 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001793 476.0
DYD1_k127_670589_3 HmuY protein - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000001002 259.0
DYD1_k127_670589_4 Molecular chaperone DnaK - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000002422 259.0
DYD1_k127_6720853_0 with chaperone activity ATP-binding subunit K03696 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001638 526.0
DYD1_k127_6720853_1 PFAM fructosamine kinase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003262 323.0
DYD1_k127_6720853_2 antisigma factor binding K04749 - - 0.000000000000000000000000000000000000003381 150.0
DYD1_k127_6722800_0 Part of the twin-arginine translocation (Tat) system that transports large folded proteins containing a characteristic twin-arginine motif in their signal peptide across membranes K03118 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003354 395.0
DYD1_k127_6722800_1 Transporter associated domain K03699 - - 0.00000000000000000000000000000000000000000000000000000000000000000000002294 243.0
DYD1_k127_6722800_2 Ribose 5-phosphate isomerase K01808 - 5.3.1.6 0.00000000000000000000000000000000000000000000003134 171.0
DYD1_k127_6724309_0 Putative esterase - - - 1.119e-283 880.0
DYD1_k127_6724309_1 DNA ligase that catalyzes the formation of phosphodiester linkages between 5'-phosphoryl and 3'-hydroxyl groups in double-stranded DNA using NAD as a coenzyme and as the energy source for the reaction. It is essential for DNA replication and repair of damaged DNA K01972 - 6.5.1.2 4.818e-266 826.0
DYD1_k127_6724309_2 Lamin Tail Domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000671 580.0
DYD1_k127_6724309_3 Catalyzes the NADPH-dependent formation of L-aspartate- semialdehyde (L-ASA) by the reductive dephosphorylation of L- aspartyl-4-phosphate K00133 - 1.2.1.11 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005748 533.0
DYD1_k127_6724309_4 PFAM pfkB family carbohydrate kinase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004866 343.0
DYD1_k127_6724309_5 TIGRFAM TIGR02453 family protein - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001218 311.0
DYD1_k127_6724309_6 NUMOD4 motif - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000001722 296.0
DYD1_k127_6724309_7 DNA ligase that catalyzes the formation of phosphodiester linkages between 5'-phosphoryl and 3'-hydroxyl groups in double-stranded DNA using NAD as a coenzyme and as the energy source for the reaction. It is essential for DNA replication and repair of damaged DNA K01972 - 6.5.1.2 0.0000000000000000000000000000000000000000000000000000000000000002591 222.0
DYD1_k127_6724723_0 PFAM Scaffold protein Nfu NifU N terminal - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001072 326.0
DYD1_k127_6724723_1 OmpA family K02557 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002605 327.0
DYD1_k127_6724723_2 OmpA family K02557 - - 0.000000000003538 66.0
DYD1_k127_6724723_3 Asparaginase, N-terminal K01424 - 3.5.1.1 0.000000000004557 65.0
DYD1_k127_6731359_0 ABC transporter K18890 - - 1.519e-266 831.0
DYD1_k127_6731359_1 it plays a direct role in the translocation of protons across the membrane K02108 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001558 414.0
DYD1_k127_6731359_3 F(1)F(0) ATP synthase produces ATP from ADP in the presence of a proton or sodium gradient. F-type ATPases consist of two structural domains, F(1) containing the extramembraneous catalytic core and F(0) containing the membrane proton channel, linked together by a central stalk and a peripheral stalk. During catalysis, ATP synthesis in the catalytic domain of F(1) is coupled via a rotary mechanism of the central stalk subunits to proton translocation K02110 GO:0003674,GO:0003824,GO:0005215,GO:0005575,GO:0005622,GO:0005623,GO:0006139,GO:0006163,GO:0006164,GO:0006725,GO:0006753,GO:0006754,GO:0006793,GO:0006796,GO:0006807,GO:0006810,GO:0006811,GO:0006812,GO:0008150,GO:0008152,GO:0008324,GO:0009058,GO:0009117,GO:0009123,GO:0009124,GO:0009126,GO:0009127,GO:0009141,GO:0009142,GO:0009144,GO:0009145,GO:0009150,GO:0009152,GO:0009156,GO:0009161,GO:0009165,GO:0009167,GO:0009168,GO:0009199,GO:0009201,GO:0009205,GO:0009206,GO:0009259,GO:0009260,GO:0009987,GO:0015075,GO:0015077,GO:0015078,GO:0015318,GO:0015399,GO:0015405,GO:0015672,GO:0015985,GO:0015986,GO:0016020,GO:0016462,GO:0016469,GO:0016787,GO:0016817,GO:0016818,GO:0016887,GO:0017111,GO:0017144,GO:0018130,GO:0019438,GO:0019637,GO:0019693,GO:0019829,GO:0022804,GO:0022853,GO:0022857,GO:0022890,GO:0032991,GO:0033177,GO:0034220,GO:0034641,GO:0034654,GO:0042623,GO:0042625,GO:0042626,GO:0043492,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0044424,GO:0044425,GO:0044464,GO:0044769,GO:0045259,GO:0045263,GO:0046034,GO:0046390,GO:0046483,GO:0046933,GO:0051179,GO:0051234,GO:0055085,GO:0055086,GO:0071704,GO:0072521,GO:0072522,GO:0090407,GO:0090662,GO:0098655,GO:0098660,GO:0098662,GO:0098796,GO:0099131,GO:0099132,GO:1901135,GO:1901137,GO:1901293,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576,GO:1902600 - 0.000000000000000000001678 96.0
DYD1_k127_6735863_0 DoxX family - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002434 363.0
DYD1_k127_6735863_1 it is required for DNA replication and normal SOS inducibility. RecF binds preferentially to single-stranded, linear DNA. It also seems to bind ATP K03629 GO:0000731,GO:0006139,GO:0006259,GO:0006281,GO:0006302,GO:0006725,GO:0006807,GO:0006950,GO:0006974,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0018130,GO:0019438,GO:0033554,GO:0034641,GO:0034645,GO:0034654,GO:0043170,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044271,GO:0046483,GO:0050896,GO:0051716,GO:0071704,GO:0071897,GO:0090304,GO:1901360,GO:1901362,GO:1901576 - 0.0000000000000000000000000000000000000000000000000007844 186.0
DYD1_k127_6735863_2 Protein of unknown function (DUF721) - - - 0.00000000000000000000000000000000000672 138.0
DYD1_k127_6735863_3 Domain in cystathionine beta-synthase and other proteins. - - - 0.000001013 56.0
DYD1_k127_6738102_0 receptor - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001142 377.0
DYD1_k127_6738102_1 PFAM Tetratricopeptide - - - 0.000001171 51.0
DYD1_k127_6741722_0 D-fructose-1,6-bisphosphate 1-phosphohydrolase class 1 K03841 - 3.1.3.11 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004736 576.0
DYD1_k127_6741722_1 Transcriptional regulator, MarR family protein - - - 0.000000000009055 66.0
DYD1_k127_6747044_0 PFAM Family of - - - 0.0 1363.0
DYD1_k127_67989_0 Elongator protein 3, MiaB family, Radical SAM - - - 3.664e-230 721.0
DYD1_k127_67989_1 ubiE/COQ5 methyltransferase family - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003518 320.0
DYD1_k127_67989_2 arylsulfatase activity - - - 0.00000000000000000000000000000000000000000000002021 186.0
DYD1_k127_6800748_0 Transglycosylase SLT domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000004902 285.0
DYD1_k127_6800748_1 Phenazine biosynthesis-like protein - - - 0.00000000000000000000000000000000000000000008738 162.0
DYD1_k127_6800748_2 YCII-related domain - - - 0.00000000006224 63.0
DYD1_k127_6822006_0 GTPase that associates with the 50S ribosomal subunit and may have a role during protein synthesis or ribosome biogenesis K03665 - - 9.227e-201 631.0
DYD1_k127_6822006_1 Outer membrane protein beta-barrel domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000001483 243.0
DYD1_k127_6822006_2 Rieske (2Fe-2S) domain K05710 - - 0.000000000000000000000000000000000000000006704 158.0
DYD1_k127_6822006_3 COG1595 DNA-directed RNA polymerase specialized sigma subunit sigma24 homolog K03088 - - 0.000000000000000000000000000000005761 130.0
DYD1_k127_6822006_4 COG1595 DNA-directed RNA polymerase specialized sigma subunit sigma24 homolog K03088 - - 0.0000000000000000000001601 100.0
DYD1_k127_6822006_5 Fe2 -dicitrate sensor, membrane component - - - 0.0000000000000001978 81.0
DYD1_k127_6822006_6 Part of the outer membrane protein assembly complex, which is involved in assembly and insertion of beta-barrel proteins into the outer membrane - - - 0.00004506 51.0
DYD1_k127_6842052_0 Transport of potassium into the cell K03549 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002164 601.0
DYD1_k127_6842052_1 - - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009498 503.0
DYD1_k127_6843836_0 Catalyzes the complicated ring closure reaction between the two acyclic compounds 1-deoxy-D-xylulose-5-phosphate (DXP) and 3-amino-2-oxopropyl phosphate (1-amino-acetone-3-phosphate or AAP) to form pyridoxine 5'-phosphate (PNP) and inorganic phosphate K03474 GO:0003674,GO:0003824,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006725,GO:0006766,GO:0006767,GO:0006807,GO:0008150,GO:0008152,GO:0008614,GO:0008615,GO:0009058,GO:0009110,GO:0009987,GO:0016740,GO:0016769,GO:0017144,GO:0018130,GO:0019438,GO:0033856,GO:0034641,GO:0042364,GO:0042816,GO:0042819,GO:0044237,GO:0044249,GO:0044271,GO:0044281,GO:0044283,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0051186,GO:0051188,GO:0071704,GO:0072524,GO:0072525,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576,GO:1901615,GO:1901617 2.6.99.2 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001984 398.0
DYD1_k127_6843836_1 Protein of unknown function (DUF3570) - - - 0.00000000000000000000000000000006966 128.0
DYD1_k127_6850120_0 Part of the phosphoribosylformylglycinamidine synthase complex involved in the purines biosynthetic pathway. Catalyzes the ATP-dependent conversion of formylglycinamide ribonucleotide (FGAR) and glutamine to yield formylglycinamidine ribonucleotide (FGAM) and glutamate. The FGAM synthase complex is composed of three subunits. PurQ produces an ammonia molecule by converting glutamine to glutamate. PurL transfers the ammonia molecule to FGAR to form FGAM in an ATP-dependent manner. PurS interacts with PurQ and PurL and is thought to assist in the transfer of the ammonia molecule from PurQ to PurL K01952 - 6.3.5.3 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004079 359.0
DYD1_k127_6850120_2 protein-disulfide reductase activity K04084 - 1.8.1.8 0.00000000000000000000000000000000000000000002961 165.0
DYD1_k127_6850120_3 Cytochrome c biogenesis protein transmembrane region K04084 - 1.8.1.8 0.00000000000004811 79.0
DYD1_k127_6854397_0 PFAM WD domain, G-beta repeat - - - 0.0000000000000000000000000000000000000000000000000000002189 210.0
DYD1_k127_686540_0 Carbohydrate family 9 binding domain-like - - - 5.906e-267 844.0
DYD1_k127_686540_1 Nucleotidase that shows phosphatase activity on nucleoside 5'-monophosphates K03787 - 3.1.3.5 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002284 431.0
DYD1_k127_686540_2 transcriptional regulator - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001195 391.0
DYD1_k127_686540_3 Condensation of UDP-2,3-diacylglucosamine and 2,3- diacylglucosamine-1-phosphate to form lipid A disaccharide, a precursor of lipid A, a phosphorylated glycolipid that anchors the lipopolysaccharide to the outer membrane of the cell K00748 - 2.4.1.182 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000001087 285.0
DYD1_k127_686540_4 PFAM Calcineurin-like phosphoesterase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000003648 282.0
DYD1_k127_6868947_0 damaged site, the DNA wraps around one UvrB monomer. DNA wrap is dependent on ATP binding by UvrB and probably causes local melting of the DNA helix, facilitating insertion of UvrB beta-hairpin between the DNA strands. Then UvrB probes one DNA strand for the presence of a lesion. If a lesion is found the UvrA subunits dissociate and the UvrB-DNA preincision complex is formed. This complex is subsequently bound by UvrC and the second UvrB is released. If no lesion is found, the DNA wraps around the other UvrB subunit that will check the other stand for damage K03702 - - 0.0 1161.0
DYD1_k127_6868947_1 Bifunctional purine biosynthesis protein PurH K00602 - 2.1.2.3,3.5.4.10 2.758e-248 776.0
DYD1_k127_6868947_10 Predicted membrane protein (DUF2306) - - - 0.000000000000000000000000000000002484 138.0
DYD1_k127_6868947_11 In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity K02335 - 2.7.7.7 0.0000000000000000001297 89.0
DYD1_k127_6868947_12 Transporter associated domain - - - 0.000000000000001861 77.0
DYD1_k127_6868947_13 Tetratricopeptide repeat - - - 0.0000000000002724 83.0
DYD1_k127_6868947_2 iron-sulfur cluster-binding protein K18929 - - 3.59e-235 733.0
DYD1_k127_6868947_3 TIGRFAM ComEC Rec2-related protein K02238 - - 1.695e-207 666.0
DYD1_k127_6868947_4 Can catalyze the hydrolysis of ATP in the presence of single-stranded DNA, the ATP-dependent uptake of single-stranded DNA by duplex DNA, and the ATP-dependent hybridization of homologous single-stranded DNAs. It interacts with LexA causing its activation and leading to its autocatalytic cleavage K03553 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002508 589.0
DYD1_k127_6868947_5 polysaccharide deacetylase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001378 507.0
DYD1_k127_6868947_6 drug metabolite-transporting permease - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002423 370.0
DYD1_k127_6868947_7 Protein of unknown function (DUF3109) - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000003911 267.0
DYD1_k127_6868947_8 TIGRFAM gliding motility-associated lipoprotein GldD - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000001122 264.0
DYD1_k127_6868947_9 Acetyltransferase (GNAT) domain - - - 0.0000000000000000000000000000000000000000000000000238 184.0
DYD1_k127_688207_0 Catalyzes the attachment of glutamate to tRNA(Glu) in a two-step reaction glutamate is first activated by ATP to form Glu-AMP and then transferred to the acceptor end of tRNA(Glu) K01885 - 6.1.1.17 5.257e-248 774.0
DYD1_k127_688207_1 gliding motility-associated lipoprotein GldJ - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006602 581.0
DYD1_k127_688207_2 Involved in cell wall formation. Catalyzes the final step in the synthesis of UDP-N-acetylmuramoyl-pentapeptide, the precursor of murein K01929 - 6.3.2.10 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001754 557.0
DYD1_k127_688207_3 Aldo keto reductase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006692 430.0
DYD1_k127_688207_4 TIGRFAM hydrolase, TatD family K03424 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002949 345.0
DYD1_k127_688207_5 polysaccharide deacetylase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000008375 269.0
DYD1_k127_688207_6 - - - - 0.000000000000000000000000000000000000000000000000000000000000000000000001103 255.0
DYD1_k127_688207_7 COGs COG2185 Methylmalonyl-CoA mutase C-terminal domain subunit (cobalamin-binding) K01849 - 5.4.99.2 0.000000000000000000000000000000000000000000000000000000000000000000000009693 243.0
DYD1_k127_688207_8 Belongs to the enoyl-CoA hydratase isomerase family K01715 - 4.2.1.17 0.0000000000000000000000000005816 114.0
DYD1_k127_688207_9 Recombinase zinc beta ribbon domain - - - 0.00000002838 57.0
DYD1_k127_6890195_0 The glycine cleavage system catalyzes the degradation of glycine. The P protein binds the alpha-amino group of glycine through its pyridoxal phosphate cofactor K00281,K00283 - 1.4.4.2 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007206 469.0
DYD1_k127_6890195_1 PFAM acid phosphatase (Class B) - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000002465 281.0
DYD1_k127_6890195_2 Prolyl oligopeptidase, N-terminal beta-propeller domain K01354 GO:0003674,GO:0003824,GO:0004175,GO:0004252,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006508,GO:0006807,GO:0008150,GO:0008152,GO:0008233,GO:0008236,GO:0016787,GO:0017171,GO:0019538,GO:0043170,GO:0044238,GO:0044424,GO:0044464,GO:0070011,GO:0070012,GO:0071704,GO:0140096,GO:1901564 3.4.21.83 0.000000000000000000000000000000000000000000000000000000000000363 214.0
DYD1_k127_6890888_0 - - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000007131 294.0
DYD1_k127_6890888_1 peptidase M1 K01256 - 3.4.11.2 0.0000000000000000000000000000000000000000000000000000000000000000000000000000001085 272.0
DYD1_k127_6894231_0 Deoxycytidine triphosphate deaminase K01494 - 3.5.4.13 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005097 343.0
DYD1_k127_6894231_1 Belongs to the P-Pant transferase superfamily - - - 0.0000000000000000000000000000000000000000000000000000003825 195.0
DYD1_k127_6894231_2 Protein of unknown function (DUF3810) - - - 0.00000000007268 62.0
DYD1_k127_6898707_0 Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family K00821 - 2.6.1.11,2.6.1.17 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000299 588.0
DYD1_k127_6898707_1 One of several proteins that assist in the late maturation steps of the functional core of the 30S ribosomal subunit. Helps release RbfA from mature subunits. May play a role in the assembly of ribosomal proteins into the subunit. Circularly permuted GTPase that catalyzes slow GTP hydrolysis, GTPase activity is stimulated by the 30S ribosomal subunit K06949 - 3.1.3.100 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009254 478.0
DYD1_k127_6898707_2 COGs COG0663 Carbonic anhydrase acetyltransferase isoleucine patch superfamily - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005103 299.0
DYD1_k127_6898707_4 CarboxypepD_reg-like domain - - - 0.00000000000000000000007569 98.0
DYD1_k127_6898707_5 von Willebrand factor, type A K07114 - - 0.000000000000000000007153 94.0
DYD1_k127_6904742_0 Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family K03296,K18138 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004741 497.0
DYD1_k127_6904742_1 Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family K03585 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006766 302.0
DYD1_k127_6904742_2 Rhodanese-like domain K01069 - 3.1.2.6 0.0009593 44.0
DYD1_k127_6905734_0 Aminotransferase class I and II K00812 - 2.6.1.1 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009135 509.0
DYD1_k127_6905734_1 lysine 2,3-aminomutase activity - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003422 398.0
DYD1_k127_6905734_2 PFAM type I phosphodiesterase nucleotide pyrophosphatase K01113 - 3.1.3.1 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000306 399.0
DYD1_k127_6905816_0 PPIC-type PPIASE domain K03771 - 5.2.1.8 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001621 329.0
DYD1_k127_6905816_1 PPIC-type PPIASE domain K03771 - 5.2.1.8 0.000000000000000000000000000000000000000000000000000001595 199.0
DYD1_k127_6905816_2 PFAM alkyl hydroperoxide reductase Thiol specific antioxidant Mal allergen - - - 0.000000000006014 66.0
DYD1_k127_6911280_0 Acetyl-CoA carboxylase, carboxyltransferase component (subunits alpha and beta) - - - 1.003e-294 912.0
DYD1_k127_6911280_1 FeS assembly protein SufB K09014 - - 1.003e-276 856.0
DYD1_k127_6911280_2 Endonuclease that specifically degrades the RNA of RNA- DNA hybrids K03469 - 3.1.26.4 0.00000000000000000000000000000000000000000000000000000000000000004218 225.0
DYD1_k127_6911280_3 Belongs to the UPF0102 family K07460 - - 0.00000000000000000000000000000000000000003228 154.0
DYD1_k127_6911280_4 - - - - 0.0000000000000000000000000000001545 130.0
DYD1_k127_6920538_0 acetyl-CoA carboxylase, biotin carboxylase K01961 - 6.3.4.14,6.4.1.2 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008623 401.0
DYD1_k127_6925093_0 PFAM YicC-like family, N-terminal region - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009443 437.0
DYD1_k127_6925093_1 GldH lipoprotein - GO:0006022,GO:0006026,GO:0006030,GO:0006032,GO:0006040,GO:0006807,GO:0006928,GO:0008150,GO:0008152,GO:0009056,GO:0009057,GO:0009987,GO:0017144,GO:0040011,GO:0042737,GO:0043170,GO:0044237,GO:0044248,GO:0046348,GO:0048870,GO:0051179,GO:0051674,GO:0071704,GO:0071976,GO:1901071,GO:1901072,GO:1901135,GO:1901136,GO:1901564,GO:1901565,GO:1901575 - 0.00000000000000033 82.0
DYD1_k127_6925093_2 Type I restriction enzyme R protein N terminus (HSDR_N) K01153 - 3.1.21.3 0.000000000004374 66.0
DYD1_k127_6928211_0 chelatase, subunit chli K07391 - - 0.000000000000000000000000000000000000000000000000000000000000000000002997 237.0
DYD1_k127_6928211_1 PFAM Peptidase M1 membrane alanine aminopeptidase K01256 - 3.4.11.2 0.000000000000000000000000000000000000000000000000001358 189.0
DYD1_k127_6932360_0 A type II topoisomerase that negatively supercoils closed circular double-stranded (ds) DNA in an ATP-dependent manner to modulate DNA topology and maintain chromosomes in an underwound state. Negative supercoiling favors strand separation, and DNA replication, transcription, recombination and repair, all of which involve strand separation. Also able to catalyze the interconversion of other topological isomers of dsDNA rings, including catenanes and knotted rings. Type II topoisomerases break and join 2 DNA strands simultaneously in an ATP-dependent manner K02470 - 5.99.1.3 0.0 1041.0
DYD1_k127_6932360_1 PFAM peptidase S8 and S53 subtilisin kexin sedolisin - - - 1.332e-226 720.0
DYD1_k127_6932360_2 - - - - 0.000000000000000000000000000008367 119.0
DYD1_k127_6936598_0 CHAT domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000005156 252.0
DYD1_k127_6936598_1 COG0457 FOG TPR repeat - - - 0.0000000000000000000000000000000000000000000000000000003434 210.0
DYD1_k127_6936598_2 - - - - 0.00000000000000000000000000000000000000132 157.0
DYD1_k127_6945244_0 glutamine synthetase K01915 - 6.3.1.2 4.012e-194 610.0
DYD1_k127_6945244_1 Membrane dipeptidase (Peptidase family M19) K01273 - 3.4.13.19 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008529 475.0
DYD1_k127_6953202_0 DeoC/LacD family aldolase K01619 - 4.1.2.4 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003425 466.0
DYD1_k127_6953202_1 Aldehyde dehydrogenase family K00128,K00138 - 1.2.1.3 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001576 338.0
DYD1_k127_6953202_2 amidohydrolase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003233 318.0
DYD1_k127_6956284_0 Arginyl-tRNA synthetase K01887 GO:0003674,GO:0003824,GO:0004812,GO:0004814,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006082,GO:0006139,GO:0006399,GO:0006412,GO:0006418,GO:0006420,GO:0006518,GO:0006520,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0016070,GO:0016874,GO:0016875,GO:0019538,GO:0019752,GO:0034641,GO:0034645,GO:0034660,GO:0043038,GO:0043039,GO:0043043,GO:0043170,GO:0043436,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044281,GO:0044424,GO:0044464,GO:0046483,GO:0071704,GO:0090304,GO:0140098,GO:0140101,GO:1901360,GO:1901564,GO:1901566,GO:1901576 6.1.1.19 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001276 530.0
DYD1_k127_6956284_1 peptidyl-tyrosine sulfation - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000001068 280.0
DYD1_k127_6956284_2 Transcriptional repressor, CopY family - - - 0.000000000000000000000000000000000000000000000000000000005225 200.0
DYD1_k127_6956284_3 Papain-like cysteine protease AvrRpt2 - - - 0.00000000000000000000000000000000000000000000000006693 184.0
DYD1_k127_6956284_4 BlaR1 peptidase M56 - - - 0.00000000002257 68.0
DYD1_k127_6957981_0 D-alanyl-D-alanine carboxypeptidase K07259 - 3.4.16.4 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007156 412.0
DYD1_k127_6957981_1 Peptidase M50 - - - 0.0000000000000000000000000000000000000000000000000003754 197.0
DYD1_k127_6957981_2 - - - - 0.0000000000000000000000000000000000001991 145.0
DYD1_k127_6957981_3 DoxX family K15977 - - 0.00000000000000000000000000000007142 128.0
DYD1_k127_6966295_0 TonB dependent receptor K16091 - - 3.802e-233 730.0
DYD1_k127_6966430_0 L,D-transpeptidase catalytic domain - - - 0.00000000000000000000000000000000000000000000008536 179.0
DYD1_k127_6966430_1 - - - - 0.0000000000000000000000000000000000000005198 149.0
DYD1_k127_6966430_2 Peptidase, M48 family - - - 0.000000000000000000000000002222 112.0
DYD1_k127_6966430_3 RNA recognition motif - - - 0.0000000000000000000000008925 108.0
DYD1_k127_6966430_4 - - - - 0.0000000009158 64.0
DYD1_k127_6967164_0 COG4445 Hydroxylase for synthesis of 2-methylthio-cis-ribozeatin in tRNA K06169 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005052 334.0
DYD1_k127_6967164_1 Catalyzes the transfer of the gamma-phosphate of ATP to D-galactose to form alpha-D-galactose-1-phosphate (Gal-1-P) K00849 - 2.7.1.6 0.00000000000000000000000000000000000000000000009769 171.0
DYD1_k127_6967164_2 Forms an intersubunit bridge (bridge B4) with the 23S rRNA of the 50S subunit in the ribosome K02956 GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0015935,GO:0022626,GO:0022627,GO:0032991,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:1990904 - 0.0000000000000000000000000000000000007976 141.0
DYD1_k127_6967164_3 Involved in mRNA degradation. Catalyzes the phosphorolysis of single-stranded polyribonucleotides processively in the 3'- to 5'-direction K00962 - 2.7.7.8 0.0000000000000000000006976 96.0
DYD1_k127_6967519_0 Required for the formation of a threonylcarbamoyl group on adenosine at position 37 (t(6)A37) in tRNAs that read codons beginning with adenine K07566 - 2.7.7.87 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000048 344.0
DYD1_k127_6967519_1 Glycosyl transferase, family 9 K02843 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001421 332.0
DYD1_k127_6969058_0 Cytochrome c - - - 0.000000000000000000000000000000000000000000000000000000000000000000001877 248.0
DYD1_k127_6969058_1 - - - - 0.00000000000439 73.0
DYD1_k127_6969058_2 Tetratricopeptide repeat - - - 0.00000001305 58.0
DYD1_k127_6973062_0 Belongs to the sigma-70 factor family. ECF subfamily K03088 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000007785 293.0
DYD1_k127_698271_0 GAF domain K03406 - - 0.0 1209.0
DYD1_k127_698271_1 His Kinase A (phosphoacceptor) domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000003769 282.0
DYD1_k127_6983901_0 cheY-homologous receiver domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000009699 251.0
DYD1_k127_6983901_1 Histidine kinase-like ATPases - - - 0.0000000000000000000000000000000000000000000000000004446 189.0
DYD1_k127_698393_0 - - - - 0.000000000000008271 80.0
DYD1_k127_6989350_0 glutamine synthetase K01915 - 6.3.1.2 3.754e-194 608.0
DYD1_k127_6989350_1 - - - - 0.0000000000000000000000000000000000000001305 158.0
DYD1_k127_6989350_2 - - - - 0.000001301 51.0
DYD1_k127_6990053_0 Belongs to the helicase family. UvrD subfamily K03657 - 3.6.4.12 3.739e-318 1005.0
DYD1_k127_6990053_1 AMP-dependent synthetase K01897 - 6.2.1.3 1.222e-272 849.0
DYD1_k127_6990053_2 PFAM Major Facilitator Superfamily K08191 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002273 464.0
DYD1_k127_6990053_3 photosynthesis - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002521 345.0
DYD1_k127_6990053_4 PFAM periplasmic binding protein LacI transcriptional regulator K02529 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000003419 296.0
DYD1_k127_6990053_5 Tetratricopeptide repeat - - - 0.000000000000000000000000000000000000000000000133 172.0
DYD1_k127_6992475_0 Major Facilitator K16211 - - 2.455e-210 661.0
DYD1_k127_6992475_1 Cyclomaltodextrinase, N-terminal K21575 - 3.2.1.135 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000001381 282.0
DYD1_k127_72043_0 PFAM Aminotransferase class I and II K14287 - 2.6.1.88 2.346e-194 611.0
DYD1_k127_72043_1 Methylase involved in ubiquinone menaquinone biosynthesis K07755 - 2.1.1.137 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002332 389.0
DYD1_k127_72043_2 PFAM EamA-like transporter family K15270 - - 0.00000000000000000000000000000000000000000000000000000000000000006295 232.0
DYD1_k127_72043_3 helix_turn_helix, Arsenical Resistance Operon Repressor - - - 0.0000000000000000000000000000000000000000000000005576 177.0
DYD1_k127_72043_4 Endoribonuclease L-PSP - - - 0.000000000000000002036 85.0
DYD1_k127_721479_0 Involved in the TCA cycle. Catalyzes the stereospecific interconversion of fumarate to L-malate K01679 - 4.2.1.2 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000133 482.0
DYD1_k127_721479_1 Metalloenzyme superfamily - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006113 347.0
DYD1_k127_722327_0 Belongs to the short-chain dehydrogenases reductases (SDR) family - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004608 334.0
DYD1_k127_722327_1 HAD-hyrolase-like K07025 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001349 316.0
DYD1_k127_722327_2 Catalyzes the formation of phosphatidylethanolamine (PtdEtn) from phosphatidylserine (PtdSer) K01613 - 4.1.1.65 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000006849 289.0
DYD1_k127_722327_3 Cytidylyltransferase family K00981 - 2.7.7.41 0.0000000000000000000000000000000000000001091 153.0
DYD1_k127_722327_4 COG0745 Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain K07658 - - 0.000000000000000000000000004425 109.0
DYD1_k127_725116_0 - - - - 0.0000000000000000000000000006125 118.0
DYD1_k127_731296_0 Catalyzes the condensation of (S)-aspartate-beta- semialdehyde (S)-ASA and pyruvate to 4-hydroxy- tetrahydrodipicolinate (HTPA) K01714 - 4.3.3.7 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000129 405.0
DYD1_k127_731296_1 PFAM DNA polymerase beta domain protein region K07075 - - 0.0000000000000000000000001817 108.0
DYD1_k127_731296_2 Helix-turn-helix domain - - - 0.000000009896 60.0
DYD1_k127_734862_0 This protein is involved in the repair of mismatches in DNA. It is required for dam-dependent methyl-directed DNA mismatch repair. May act as a molecular matchmaker , a protein that promotes the formation of a stable complex between two or more DNA-binding proteins in an ATP-dependent manner without itself being part of a final effector complex K03572 GO:0003674,GO:0003676,GO:0003677,GO:0003697,GO:0003824,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0006139,GO:0006259,GO:0006281,GO:0006298,GO:0006725,GO:0006807,GO:0006950,GO:0006974,GO:0008150,GO:0008152,GO:0009987,GO:0016462,GO:0016787,GO:0016817,GO:0016818,GO:0016887,GO:0017111,GO:0032300,GO:0032991,GO:0033554,GO:0034641,GO:0043170,GO:0044237,GO:0044238,GO:0044260,GO:0044424,GO:0044464,GO:0046483,GO:0050896,GO:0051716,GO:0071704,GO:0090304,GO:0097159,GO:1901360,GO:1901363,GO:1990391 - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005223 579.0
DYD1_k127_74678_0 COG1680 Beta-lactamase class C and other penicillin binding - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003491 349.0
DYD1_k127_74678_1 DNA-binding transcription factor activity - - - 0.00000000000000000000002714 104.0
DYD1_k127_781835_0 Pyruvate 2-oxoglutarate dehydrogenase complex, dehydrogenase (E1) component, eukaryotic type K11381 - 1.2.4.4 2.742e-274 855.0
DYD1_k127_781835_1 Radical SAM K11784 - 1.21.98.1 5.779e-222 691.0
DYD1_k127_781835_2 Peptidase M16 K07263 - - 7.779e-202 634.0
DYD1_k127_781835_3 Peptidase M16 - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000575 591.0
DYD1_k127_781835_4 Aspartyl protease - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002245 471.0
DYD1_k127_781835_5 TPR repeat - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001041 384.0
DYD1_k127_781835_6 Methyltransferase FkbM domain - - - 0.000000000000000000000000000004574 123.0
DYD1_k127_781835_7 PFAM membrane protein of K08972 - - 0.00000000000000000000000004391 111.0
DYD1_k127_784265_0 Domain of unknown function (DUF5118) - - - 0.00000000000000000000000000000000000000000000000000000000000000000001125 239.0
DYD1_k127_784265_1 Transposase - - - 0.0000004439 56.0
DYD1_k127_796139_0 Protein of unknown function (DUF2911) - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000001588 304.0
DYD1_k127_796139_1 Tetratricopeptide repeat - - - 0.000000000000000000000000000000004713 134.0
DYD1_k127_796139_2 Glyoxalase-like domain K06996 - - 0.0000000000000000000000019 105.0
DYD1_k127_818700_0 Belongs to the dicarboxylate amino acid cation symporter (DAACS) (TC 2.A.23) family - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000808 537.0
DYD1_k127_818700_1 Belongs to the dicarboxylate amino acid cation symporter (DAACS) (TC 2.A.23) family K11102 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009305 510.0
DYD1_k127_818700_2 PFAM SNARE associated Golgi protein K03975 - - 0.00000000000000000000000000000000000000000000000000000000000000000007477 238.0
DYD1_k127_818700_3 Major facilitator superfamily MFS_1 - - - 0.0000000000000000000000000000001094 125.0
DYD1_k127_818700_4 alanine symporter K03310 - - 0.0000000000004942 73.0
DYD1_k127_821267_0 Alpha amylase, catalytic domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003306 577.0
DYD1_k127_821267_1 COGs COG0265 Trypsin-like serine protease typically periplasmic contain C-terminal PDZ domain - - - 0.000000000000000000000000000000000002364 141.0
DYD1_k127_821267_2 YjgF/chorismate_mutase-like, putative endoribonuclease - - - 0.000000000000001973 79.0
DYD1_k127_822467_0 Catalyzes the oxidation of 5,10- methylenetetrahydrofolate to 5,10-methenyltetrahydrofolate and then the hydrolysis of 5,10-methenyltetrahydrofolate to 10- formyltetrahydrofolate K01491 GO:0003674,GO:0003824,GO:0004477,GO:0004488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006730,GO:0008150,GO:0008152,GO:0009987,GO:0016491,GO:0016645,GO:0016646,GO:0016787,GO:0016810,GO:0016814,GO:0019238,GO:0044237,GO:0044281,GO:0044424,GO:0044444,GO:0044464,GO:0055114 1.5.1.5,3.5.4.9 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007746 463.0
DYD1_k127_822467_1 photosystem II stabilization - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000001482 288.0
DYD1_k127_822467_2 Catalyzes the complex heterocyclic radical-mediated conversion of 6-carboxy-5,6,7,8-tetrahydropterin (CPH4) to 7- carboxy-7-deazaguanine (CDG), a step common to the biosynthetic pathways of all 7-deazapurine-containing compounds K10026 - 4.3.99.3 0.00000000000000000000000002258 110.0
DYD1_k127_826432_0 membrane protein required for spore maturation in B.subtilis K06373 - - 2.222e-196 621.0
DYD1_k127_826432_1 Starch-binding associating with outer membrane - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008307 405.0
DYD1_k127_830038_0 Cytochrome C oxidase subunit I K02274 - 1.9.3.1 1.92e-233 725.0
DYD1_k127_830038_1 Cytochrome C oxidase subunit II, periplasmic domain K02275 - 1.9.3.1 0.000000000000000000000000000000000000000000000000000000000000000000000000000001558 264.0
DYD1_k127_830038_2 Cytochrome C oxidase subunit I K02274 - 1.9.3.1 0.0000000000000000000000000000000000000000000000000000000000000000000004219 239.0
DYD1_k127_833957_0 TIGRFAM ATPase, P-type, K Mg Cd Cu Zn Na Ca Na H-transporter K01537 - 3.6.3.8 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001232 531.0
DYD1_k127_833957_1 LexA-binding, inner membrane-associated putative hydrolase K07038 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005271 475.0
DYD1_k127_833957_2 Phospholipase D. Active site motifs. K06131 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008648 393.0
DYD1_k127_833957_3 - - - - 0.000000000000000000000000000000000000000000000000000162 190.0
DYD1_k127_833957_4 - - - - 0.000000000000001737 77.0
DYD1_k127_833957_5 AI-2E family transporter - - - 0.000000000005811 68.0
DYD1_k127_83862_0 peptidase S9B dipeptidylpeptidase IV domain protein - - - 2.465e-243 757.0
DYD1_k127_846930_0 protein with SCP PR1 domains - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006719 344.0
DYD1_k127_846930_1 Tyrosine recombinase XerC K04763 - - 0.000000000000000000000000005443 109.0
DYD1_k127_846930_3 Belongs to the glycosyl hydrolase 31 family K01187 - 3.2.1.20 0.000002665 57.0
DYD1_k127_848081_0 Bacterial membrane protein YfhO - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000002709 297.0
DYD1_k127_852150_0 alpha-2-macroglobulin domain protein K06894 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003233 449.0
DYD1_k127_852150_1 penicillin-binding protein 1C K05367 - 2.4.1.129 0.0001124 46.0
DYD1_k127_857082_0 Couples transcription and DNA repair by recognizing RNA polymerase (RNAP) stalled at DNA lesions. Mediates ATP-dependent release of RNAP and its truncated transcript from the DNA, and recruitment of nucleotide excision repair machinery to the damaged site K03723 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002354 512.0
DYD1_k127_878728_0 Tetratricopeptide repeat - - - 0.000000000000000000000000000000000000000000000000002287 196.0
DYD1_k127_886753_0 Etoposide-induced protein 2.4 (EI24) K06203 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007321 308.0
DYD1_k127_886753_1 Uroporphyrin-iii c tetrapyrrole (Corrin porphyrin) methyltransferase K07056 - 2.1.1.198 0.000000000000000000000275 98.0
DYD1_k127_889603_0 Protein of unknown function (DUF819) - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005796 589.0
DYD1_k127_889603_1 peptidase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000004655 256.0
DYD1_k127_889603_2 - - - - 0.0000000000000001327 85.0
DYD1_k127_898041_0 PFAM PSP1 C-terminal conserved region - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001818 608.0
DYD1_k127_898041_1 COG2812 DNA polymerase III, gamma tau subunits K02341 - 2.7.7.7 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008216 552.0
DYD1_k127_902048_0 Located at the back of the 30S subunit body where it stabilizes the conformation of the head with respect to the body K02988 GO:0003674,GO:0003735,GO:0005198,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0006412,GO:0006518,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0015935,GO:0019538,GO:0022626,GO:0022627,GO:0032991,GO:0034641,GO:0034645,GO:0043043,GO:0043170,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:0071704,GO:1901564,GO:1901566,GO:1901576,GO:1990904 - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001077 311.0
DYD1_k127_902048_1 This protein binds to the 23S rRNA, and is important in its secondary structure. It is located near the subunit interface in the base of the L7 L12 stalk, and near the tRNA binding site of the peptidyltransferase center K02933 GO:0002181,GO:0003674,GO:0003676,GO:0003723,GO:0003735,GO:0005198,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0006412,GO:0006518,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0015934,GO:0019538,GO:0022625,GO:0022626,GO:0032991,GO:0034641,GO:0034645,GO:0043043,GO:0043170,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:0071704,GO:0097159,GO:1901363,GO:1901564,GO:1901566,GO:1901576,GO:1990904 - 0.00000000000000000000000000000000000000000000000000000000000000000000000000005016 259.0
DYD1_k127_902048_2 binds to the 23S rRNA K02876 GO:0003674,GO:0003735,GO:0005198,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0015934,GO:0022625,GO:0022626,GO:0032991,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:1990904 - 0.0000000000000000000000000000000000000000000000000000000000000001038 224.0
DYD1_k127_902048_3 The central subunit of the protein translocation channel SecYEG. Consists of two halves formed by TMs 1-5 and 6-10. These two domains form a lateral gate at the front which open onto the bilayer between TMs 2 and 7, and are clamped together by SecE at the back. The channel is closed by both a pore ring composed of hydrophobic SecY resides and a short helix (helix 2A) on the extracellular side of the membrane which forms a plug. The plug probably moves laterally to allow the channel to open. The ring and the pore may move independently K03076 - - 0.00000000000000000000000000000000000000000000000000000002846 200.0
DYD1_k127_902048_4 This is one of the proteins that binds and probably mediates the attachment of the 5S RNA into the large ribosomal subunit, where it forms part of the central protuberance K02881 GO:0003674,GO:0003676,GO:0003723,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0008097,GO:0015934,GO:0019843,GO:0022625,GO:0022626,GO:0032991,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:0097159,GO:1901363,GO:1990904 - 0.000000000000000000000000000000000000000000003255 166.0
DYD1_k127_902048_5 Ribosomal protein L30 K02907 GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0015934,GO:0022625,GO:0022626,GO:0032991,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:1990904 - 0.0000000000000000000000008518 105.0
DYD1_k127_902121_0 PFAM Formylglycine-generating sulfatase enzyme - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003917 528.0
DYD1_k127_902121_1 Gliding motility-associated protein GldM - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001422 315.0
DYD1_k127_902121_2 TIGRFAM gliding motility-associated protein GldL - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000001534 271.0
DYD1_k127_902807_0 Belongs to the argininosuccinate synthase family. Type 1 subfamily K01940 - 6.3.4.5 9.142e-221 688.0
DYD1_k127_902807_1 Acetyltransferase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003661 368.0
DYD1_k127_902807_2 Catalyzes the NADPH-dependent reduction of N-acetyl-5- glutamyl phosphate to yield N-acetyl-L-glutamate 5-semialdehyde K00145 - 1.2.1.38 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000001349 287.0
DYD1_k127_902807_3 Uroporphyrin-iii c tetrapyrrole (Corrin porphyrin) methyltransferase K07056 - 2.1.1.198 0.00000000000000000000000000000000000000000000000000000000000008997 216.0
DYD1_k127_903631_0 Catalyzes the reversible hydrolysis of the amide bond within dihydroorotate. This metabolic intermediate is required for the biosynthesis of pyrimidine nucleotides K01465 - 3.5.2.3 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004124 604.0
DYD1_k127_903631_1 DNA mismatch repair protein MutS - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003455 602.0
DYD1_k127_903631_2 PFAM Peptidase M1 membrane alanine aminopeptidase K01256 - 3.4.11.2 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003625 362.0
DYD1_k127_904365_0 Metallo-beta-lactamase superfamily - - - 0.00000000000000000000000000000000003751 147.0
DYD1_k127_90750_0 Histidine kinase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000007308 274.0
DYD1_k127_90750_1 Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain - - - 0.000000000000000000000000000000000000000000000000000000002867 206.0
DYD1_k127_90750_2 - - - - 0.0000000000000001554 92.0
DYD1_k127_90750_3 Belongs to the peptidase S8 family - - - 0.0005538 45.0
DYD1_k127_909300_0 Flavin transferase that catalyzes the transfer of the FMN moiety of FAD and its covalent binding to the hydroxyl group of a threonine residue in a target flavoprotein K03734 - 2.7.1.180 0.000000000000000000000000000000000000000000000001061 176.0
DYD1_k127_909300_1 Protein of unknown function (DUF3570) - - - 0.000000000000000000000000000000000000005946 152.0
DYD1_k127_909300_2 Domain of unknown function (DUF4266) - - - 0.00000000000000001841 83.0
DYD1_k127_917842_0 COG1228 Imidazolonepropionase and related - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001215 608.0
DYD1_k127_917842_1 Catalyzes the interconversion between ADP-D-glycero- beta-D-manno-heptose and ADP-L-glycero-beta-D-manno-heptose via an epimerization at carbon 6 of the heptose K03274 - 5.1.3.20 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002441 465.0
DYD1_k127_91906_0 Peptidase M61 - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000404 427.0
DYD1_k127_91906_1 Belongs to the arginase family K01476,K01480 - 3.5.3.1,3.5.3.11 0.000000000000000000000000000000000000000000000000000000000000000000000000000000002336 273.0
DYD1_k127_91906_2 Universal stress protein - - - 0.000000000000000000000000000000000000000000000000000000000000000004244 235.0
DYD1_k127_91906_3 Universal stress protein - - - 0.000000000000000000000000000000000000000000000000000000000000000007308 233.0
DYD1_k127_91906_4 Condenses 4-methyl-5-(beta-hydroxyethyl)thiazole monophosphate (THZ-P) and 2-methyl-4-amino-5-hydroxymethyl pyrimidine pyrophosphate (HMP-PP) to form thiamine monophosphate (TMP) K00788 GO:0003674,GO:0003824,GO:0004789,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006725,GO:0006766,GO:0006767,GO:0006772,GO:0006790,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009110,GO:0009228,GO:0009987,GO:0016740,GO:0016765,GO:0017144,GO:0018130,GO:0019438,GO:0034641,GO:0042364,GO:0042723,GO:0042724,GO:0044237,GO:0044249,GO:0044271,GO:0044272,GO:0044281,GO:0044283,GO:0044424,GO:0044464,GO:0046483,GO:0071704,GO:0072527,GO:0072528,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576 2.5.1.3 0.000000000003232 69.0
DYD1_k127_921773_0 Domain of unknown function (DUF389) - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000187 295.0
DYD1_k127_92200_0 ATP-dependent serine protease that mediates the selective degradation of mutant and abnormal proteins as well as certain short-lived regulatory proteins. Required for cellular homeostasis and for survival from DNA damage and developmental changes induced by stress. Degrades polypeptides processively to yield small peptide fragments that are 5 to 10 amino acids long. Binds to DNA in a double-stranded, site-specific manner K01338 - 3.4.21.53 0.0 1284.0
DYD1_k127_92200_1 penicillin-binding protein - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004553 413.0
DYD1_k127_92200_2 Outer membrane protein beta-barrel domain - - - 0.000000000000000000000000000000000000000000000000000000000000004329 222.0
DYD1_k127_92200_3 GlcNAc-PI de-N-acetylase - - - 0.0000000000005705 70.0
DYD1_k127_925650_0 ABC-type antimicrobial peptide transport system, permease component K02004 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000392 322.0
DYD1_k127_925650_1 PFAM MotA TolQ ExbB proton channel K03561 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000006901 291.0
DYD1_k127_926116_0 Belongs to the ompA family K03286 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006882 321.0
DYD1_k127_926116_1 beta-glucosidase 2, glycosyl-hydrolase family 116 N-term K17108 - 3.2.1.45 0.0000000000004767 79.0
DYD1_k127_933766_0 Involved in the tonB-independent uptake of proteins - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000289 495.0
DYD1_k127_933766_1 - - - - 0.00000000000000000000000000000000000000000000000000000003737 206.0
DYD1_k127_933766_2 GAF domain K08968 - 1.8.4.14 0.0000000000000000001616 89.0
DYD1_k127_94894_0 Belongs to the BshC family K22136 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007593 482.0
DYD1_k127_94894_1 PFAM FAD dependent oxidoreductase K00285 - 1.4.5.1 0.0000000000000000000005214 96.0
DYD1_k127_950561_0 Pyruvate 2-oxoglutarate dehydrogenase complex, dehydrogenase (E1) component, eukaryotic type K11381 - 1.2.4.4 0.0 1055.0
DYD1_k127_95129_0 PFAM Activator of Hsp90 ATPase homolog 1-like protein - - - 0.0000000000000000000000000000000000000000000000004353 179.0
DYD1_k127_95129_1 Neutral zinc metallopeptidase K07054 - - 0.00000000000000000000000000001883 117.0
DYD1_k127_975041_0 PFAM Peptidase M16 inactive domain K07263 - - 0.0 1325.0
DYD1_k127_975041_1 PFAM Pyruvate flavodoxin ferredoxin oxidoreductase K00174 - 1.2.7.11,1.2.7.3 4.425e-262 812.0
DYD1_k127_975041_2 Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006103 486.0
DYD1_k127_975041_3 Adenylate and Guanylate cyclase catalytic domain - - - 0.00000000000000000000000000000000000000000000000000000000000001144 228.0
DYD1_k127_975041_4 DinB superfamily - - - 0.00000000000000000000000000000000000000000000000000000001963 201.0
DYD1_k127_977850_0 PFAM Cytochrome c, class I - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001523 483.0
DYD1_k127_980471_0 Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family K07798 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000252 260.0
DYD1_k127_980471_1 Barrel-sandwich domain of CusB or HlyD membrane-fusion K07798 - - 0.0001527 46.0
DYD1_k127_993305_0 Oxidoreductase, short chain dehydrogenase reductase family protein - - - 0.0000000000122 66.0