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Overview

ID MAG00850
Name DYD1_bin.28
Sample SMP0025
Taxonomy
Kingdom Bacteria
Phylum Chloroflexota
Class Anaerolineae
Order Anaerolineales
Family E44-bin32
Genus
Species
Assembly information
Completeness (%) 76.35
Contamination (%) 1.22
GC content (%) 68.0
N50 (bp) 10,859
Genome size (bp) 2,844,070

Location

Module

Module ID Module name Total genes Total steps Contain genes Contain steps Percentage of genes Percentage of steps

Genes2541

Gene name Description KEGG GOs EC E-value Score Sequence
DYD1_k127_1024989_0 Pyruvate phosphate dikinase, PEP/pyruvate binding domain K01007 - 2.7.9.2 3.71e-217 702.0
DYD1_k127_1024989_1 MacB-like periplasmic core domain K02004 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002623 404.0
DYD1_k127_1024989_10 PFAM secretion protein HlyD family protein - - - 0.000000000000000000000000000002964 136.0
DYD1_k127_1024989_11 response regulator K07689 - - 0.00000000000000000000158 100.0
DYD1_k127_1024989_12 Iron permease FTR1 family K07243 - - 0.00002225 51.0
DYD1_k127_1024989_2 Domain of unknown function (DUF4162) K01990 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005901 337.0
DYD1_k127_1024989_3 S-adenosylhomocysteine deaminase activity K12960 GO:0003674,GO:0003824,GO:0016787,GO:0016810,GO:0016814,GO:0019239,GO:0050270 3.5.4.28,3.5.4.31 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000104 319.0
DYD1_k127_1024989_4 MFS_1 like family K08153 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000002337 307.0
DYD1_k127_1024989_5 ATPases associated with a variety of cellular activities K02003 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000005376 276.0
DYD1_k127_1024989_6 ABC-2 family transporter protein K01992 - - 0.0000000000000000000000000000000000000000000000000002182 209.0
DYD1_k127_1024989_7 Hep Hag repeat protein - - - 0.000000000000000000000000000000000000000000000000003176 198.0
DYD1_k127_1024989_8 ABC-2 family transporter protein K01992 - - 0.00000000000000000000000000000000000000000000004407 192.0
DYD1_k127_1024989_9 Patatin-like phospholipase K07001 - - 0.00000000000000000000000000000000000000000000009639 186.0
DYD1_k127_1030708_0 Belongs to the class-I aminoacyl-tRNA synthetase family K01883 - 6.1.1.16 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001994 563.0
DYD1_k127_1030708_1 SMART Nucleotide binding protein, PINc - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001041 429.0
DYD1_k127_1030708_2 Belongs to the class IV-like SAM-binding methyltransferase superfamily. RNA methyltransferase TrmH family K03218 - 2.1.1.185 0.000000000000000000000000000000000000000000000000000000000000000000000007088 250.0
DYD1_k127_1030708_3 This protein promotes the GTP-dependent binding of aminoacyl-tRNA to the A-site of ribosomes during protein biosynthesis K02358 - - 0.00000000000002691 72.0
DYD1_k127_1030708_4 - - - - 0.0001238 49.0
DYD1_k127_1031404_0 DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates K03043 GO:0000428,GO:0005575,GO:0005622,GO:0005623,GO:0030880,GO:0032991,GO:0044424,GO:0044464,GO:0061695,GO:1902494,GO:1990234 2.7.7.6 0.0 1912.0
DYD1_k127_1031404_1 Catalyzes the GTP-dependent ribosomal translocation step during translation elongation. During this step, the ribosome changes from the pre-translocational (PRE) to the post- translocational (POST) state as the newly formed A-site-bound peptidyl-tRNA and P-site-bound deacylated tRNA move to the P and E sites, respectively. Catalyzes the coordinated movement of the two tRNA molecules, the mRNA and conformational changes in the ribosome K02355 - - 0.0 1014.0
DYD1_k127_1031404_10 Interacts with and stabilizes bases of the 16S rRNA that are involved in tRNA selection in the A site and with the mRNA backbone. Located at the interface of the 30S and 50S subunits, it traverses the body of the 30S subunit contacting proteins on the other side and probably holding the rRNA structure together. The combined cluster of proteins S8, S12 and S17 appears to hold together the shoulder and platform of the 30S subunit K02950 - - 0.00000000000000000000000000000000000000000000000000000000000002993 216.0
DYD1_k127_1031404_11 One of the primary rRNA binding proteins, it binds directly to 16S rRNA where it nucleates assembly of the head domain of the 30S subunit. Is located at the subunit interface close to the decoding center, probably blocks exit of the E-site tRNA K02992 - - 0.00000000000000000000000000000000000000000000000000000001879 201.0
DYD1_k127_1031404_13 This protein promotes the GTP-dependent binding of aminoacyl-tRNA to the A-site of ribosomes during protein biosynthesis K02358 - - 0.00000000000002418 72.0
DYD1_k127_1031404_14 Belongs to the binding-protein-dependent transport system permease family K01997,K01999 - - 0.000000000002409 68.0
DYD1_k127_1031404_2 May play a key role in the regulation of the intracellular concentration of adenosylhomocysteine K01251 - 3.3.1.1 1.258e-209 661.0
DYD1_k127_1031404_3 Can catalyze the hydrolysis of ATP in the presence of single-stranded DNA, the ATP-dependent uptake of single-stranded DNA by duplex DNA, and the ATP-dependent hybridization of homologous single-stranded DNAs. It interacts with LexA causing its activation and leading to its autocatalytic cleavage K03553 GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0044424,GO:0044444,GO:0044464 - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002925 527.0
DYD1_k127_1031404_4 Lytic transglycosylase catalytic K08309 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000163 531.0
DYD1_k127_1031404_5 histidine kinase HAMP region domain protein - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008211 502.0
DYD1_k127_1031404_6 Belongs to the binding-protein-dependent transport system permease family K01997,K01999 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004156 389.0
DYD1_k127_1031404_7 PFAM PfkB domain protein K00856 - 2.7.1.20 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007479 374.0
DYD1_k127_1031404_8 Catalyzes the interconversion of methylthioribose-1- phosphate (MTR-1-P) into methylthioribulose-1-phosphate (MTRu-1- P) K08963 - 5.3.1.23 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002873 367.0
DYD1_k127_1031404_9 phosphorelay signal transduction system - - - 0.00000000000000000000000000000000000000000000000000000000000000000000005666 251.0
DYD1_k127_1040610_0 TRAP C4-dicarboxylate transport system permease DctM subunit - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001882 499.0
DYD1_k127_1040610_1 Beta-lactamase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006609 404.0
DYD1_k127_1040610_10 - - - - 0.0000000000000000004899 93.0
DYD1_k127_1040610_11 - - - - 0.00000000004043 68.0
DYD1_k127_1040610_12 CAAX protease self-immunity K07052 - - 0.00000001296 66.0
DYD1_k127_1040610_2 ATPase family associated with various cellular activities (AAA) K03924 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001465 307.0
DYD1_k127_1040610_3 Belongs to the adenylyl cyclase class-4 guanylyl cyclase family K01768 GO:0000287,GO:0003674,GO:0003824,GO:0004016,GO:0005488,GO:0005575,GO:0005623,GO:0005886,GO:0006139,GO:0006163,GO:0006164,GO:0006171,GO:0006725,GO:0006753,GO:0006793,GO:0006796,GO:0006807,GO:0007154,GO:0007165,GO:0008150,GO:0008152,GO:0009058,GO:0009117,GO:0009150,GO:0009152,GO:0009165,GO:0009187,GO:0009190,GO:0009259,GO:0009260,GO:0009975,GO:0009987,GO:0016020,GO:0016829,GO:0016849,GO:0018130,GO:0019438,GO:0019637,GO:0019693,GO:0023052,GO:0030145,GO:0034641,GO:0034654,GO:0043167,GO:0043169,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0044464,GO:0046058,GO:0046390,GO:0046483,GO:0046872,GO:0046914,GO:0050789,GO:0050794,GO:0050896,GO:0051716,GO:0052652,GO:0055086,GO:0065007,GO:0071704,GO:0071944,GO:0072521,GO:0072522,GO:0090407,GO:1901135,GO:1901137,GO:1901293,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576 4.6.1.1 0.0000000000000000000000000000000000000000000000000000000000000000000000000000002938 292.0
DYD1_k127_1040610_4 Receptor family ligand binding region K01999 - - 0.00000000000000000000000000000000000000000000000000000000000000000000004428 257.0
DYD1_k127_1040610_5 Belongs to the adenylyl cyclase class-4 guanylyl cyclase family - - - 0.0000000000000000000000000000000000000000000000000000000000000000000005363 251.0
DYD1_k127_1040610_6 Trypsin-like peptidase domain - - - 0.0000000000000000000000000000000000000000000000000000000000002901 223.0
DYD1_k127_1040610_7 PFAM Heme NO binding - - - 0.00000000000000000000000000000000000000000000000000000001231 203.0
DYD1_k127_1040610_8 Alpha/beta hydrolase family - - - 0.000000000000000000000000000000000000000000000000000006983 203.0
DYD1_k127_1040610_9 unusual protein kinase K03688 - - 0.000000000000000000000000000001453 131.0
DYD1_k127_106229_0 Belongs to the aldehyde dehydrogenase family K00130 - 1.2.1.8 2.02e-232 727.0
DYD1_k127_106229_1 Extracellular solute-binding protein K02055,K11069 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003208 578.0
DYD1_k127_106229_2 Part of the ABC transporter complex PotABCD involved in spermidine putrescine import. Responsible for energy coupling to the transport system K02052 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001421 437.0
DYD1_k127_106229_3 ABC-type spermidine putrescine transport system, permease component I K02054,K11071 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006049 381.0
DYD1_k127_106229_4 ABC transporter (permease) K02053 GO:0005575,GO:0005623,GO:0005886,GO:0006810,GO:0008150,GO:0009290,GO:0009292,GO:0009294,GO:0009987,GO:0015931,GO:0016020,GO:0044464,GO:0044764,GO:0050657,GO:0051027,GO:0051179,GO:0051234,GO:0051704,GO:0071702,GO:0071705,GO:0071944,GO:0098657 - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002119 368.0
DYD1_k127_106229_5 Thioredoxin-like - - - 0.0000000000000000000000000000000000000000000000000003611 191.0
DYD1_k127_106229_7 Protein of unknown function (DUF541) K09807 - - 0.0000000000000000000000000000001631 134.0
DYD1_k127_1122373_0 PFAM extracellular solute-binding protein, family 5 K02035 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000036 452.0
DYD1_k127_1122373_1 Belongs to the RNA methyltransferase TrmD family K00554 GO:0001510,GO:0003674,GO:0003824,GO:0006139,GO:0006396,GO:0006399,GO:0006400,GO:0006725,GO:0006807,GO:0008033,GO:0008150,GO:0008152,GO:0008168,GO:0008173,GO:0008175,GO:0008757,GO:0009019,GO:0009451,GO:0009987,GO:0010467,GO:0016070,GO:0016423,GO:0016740,GO:0016741,GO:0016772,GO:0016779,GO:0030488,GO:0032259,GO:0034470,GO:0034641,GO:0034660,GO:0043170,GO:0043412,GO:0043414,GO:0044237,GO:0044238,GO:0044260,GO:0046483,GO:0050518,GO:0070567,GO:0071704,GO:0090304,GO:0140098,GO:0140101,GO:1901360 2.1.1.228 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004336 311.0
DYD1_k127_1122373_2 sigma-70 region 2 domain protein K03088 - - 0.000000000000000000000000000000000000000000000000000000005864 207.0
DYD1_k127_1122373_3 Nudix hydrolase - - - 0.0000000000000000000000000000000000000000000472 167.0
DYD1_k127_1122373_4 DNA-templated transcription, initiation K03088 - - 0.00000000000000000000000000000000000003314 151.0
DYD1_k127_1122373_5 AntiSigma factor - - - 0.000001698 59.0
DYD1_k127_113543_0 cellulose binding - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006611 597.0
DYD1_k127_113543_1 MacB-like periplasmic core domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003376 366.0
DYD1_k127_113543_10 Phosphoesterase family K01114 - 3.1.4.3 0.0000000007278 64.0
DYD1_k127_113543_2 protein conserved in bacteria - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009299 357.0
DYD1_k127_113543_3 MacB-like periplasmic core domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005645 319.0
DYD1_k127_113543_4 ATPases associated with a variety of cellular activities K02003 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008522 312.0
DYD1_k127_113543_5 PFAM Bacterial regulatory proteins, tetR family - - - 0.000000000000000000000000000000000000000000000000000000787 201.0
DYD1_k127_113543_6 Glyoxalase bleomycin resistance protein dioxygenase - - - 0.000000000000000000000000000000000000000000000000006524 183.0
DYD1_k127_113543_7 Protein of unknown function (DUF1697) - - - 0.000000000000000000000000000000000000000000000000706 180.0
DYD1_k127_113543_8 PFAM secretion protein HlyD family protein - - - 0.000000000000000000000000000321 128.0
DYD1_k127_113543_9 Peptidase family M23 - - - 0.000000000003357 79.0
DYD1_k127_114510_0 Belongs to the PEP-utilizing enzyme family K01007 - 2.7.9.2 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001584 497.0
DYD1_k127_114510_1 Winged helix DNA-binding domain K09927 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002305 394.0
DYD1_k127_114510_10 Belongs to the PEP-utilizing enzyme family K01007 - 2.7.9.2 0.00000000000000000000000000000000000000000000000000000000000000001377 233.0
DYD1_k127_114510_11 regulatory protein, arsR - - - 0.00000000000000000000000000000000000000000000000000000002413 202.0
DYD1_k127_114510_12 Putative membrane peptidase family (DUF2324) - - - 0.00000000000000000000000000000000000000000000000001583 190.0
DYD1_k127_114510_13 ABC-2 family transporter protein - - - 0.00000000000000000000000000000000000000001746 167.0
DYD1_k127_114510_14 PFAM band 7 protein - - - 0.000000000009931 68.0
DYD1_k127_114510_15 Cytochrome b5-like Heme/Steroid binding domain - - - 0.0000000000162 69.0
DYD1_k127_114510_2 Domain of unknown function (DUF4139) - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002226 379.0
DYD1_k127_114510_3 PFAM ABC transporter related K01990 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002373 346.0
DYD1_k127_114510_4 PFAM oxidoreductase, molybdopterin binding - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003514 327.0
DYD1_k127_114510_5 Methyltransferase domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000001731 302.0
DYD1_k127_114510_6 EamA-like transporter family - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000002806 294.0
DYD1_k127_114510_7 Phosphoribosyl transferase domain K00759 - 2.4.2.7 0.000000000000000000000000000000000000000000000000000000000000000000000000000000001051 276.0
DYD1_k127_114510_8 Confers DNA tethering and processivity to DNA polymerases and other proteins. Acts as a clamp, forming a ring around DNA (a reaction catalyzed by the clamp-loading complex) which diffuses in an ATP-independent manner freely and bidirectionally along dsDNA. Initially characterized for its ability to contact the catalytic subunit of DNA polymerase III (Pol III), a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria K02338 - 2.7.7.7 0.0000000000000000000000000000000000000000000000000000000000000000000004977 245.0
DYD1_k127_114510_9 Catalyzes the methyl esterification of L-isoaspartyl residues in peptides and proteins that result from spontaneous decomposition of normal L-aspartyl and L-asparaginyl residues. It plays a role in the repair and or degradation of damaged proteins K00573 - 2.1.1.77 0.000000000000000000000000000000000000000000000000000000000000000002538 233.0
DYD1_k127_1151836_0 Catalyzes the reversible interconversion of serine and glycine with tetrahydrofolate (THF) serving as the one-carbon carrier. This reaction serves as the major source of one-carbon groups required for the biosynthesis of purines, thymidylate, methionine, and other important biomolecules. Also exhibits THF- independent aldolase activity toward beta-hydroxyamino acids, producing glycine and aldehydes, via a retro-aldol mechanism K00600 - 2.1.2.1 0.0 1124.0
DYD1_k127_1151836_1 PFAM Gamma-glutamyltranspeptidase K00681 - 2.3.2.2,3.4.19.13 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006496 474.0
DYD1_k127_1169726_0 Two component transcriptional regulator, winged helix family - - - 0.0000000000000000000000000000000000000000000000000002131 194.0
DYD1_k127_1169726_1 Response regulator receiver K07776 GO:0003674,GO:0003676,GO:0003677,GO:0005488,GO:0006355,GO:0008150,GO:0009405,GO:0009889,GO:0010468,GO:0010556,GO:0010565,GO:0019216,GO:0019217,GO:0019219,GO:0019220,GO:0019222,GO:0031323,GO:0031326,GO:0044419,GO:0048583,GO:0050789,GO:0050794,GO:0051171,GO:0051174,GO:0051252,GO:0051704,GO:0060255,GO:0062012,GO:0065007,GO:0080090,GO:0080134,GO:0097159,GO:1901363,GO:1902882,GO:1903506,GO:2000112,GO:2001141 - 0.0000000000000000000000000000000000000000000001262 186.0
DYD1_k127_1169726_2 Response regulator receiver - - - 0.000000000000000000000002418 113.0
DYD1_k127_1188385_0 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain K01782,K07516 - 1.1.1.35,4.2.1.17,5.1.2.3 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000057 591.0
DYD1_k127_1188385_1 adenosylmethionine-8-amino-7-oxononanoate transaminase activity K15372 - 2.6.1.55 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001915 575.0
DYD1_k127_1188385_10 PFAM Bacterial regulatory proteins, tetR family - - - 0.000000000000000000000000000000000005278 143.0
DYD1_k127_1188385_11 PFAM ErfK YbiS YcfS YnhG family protein - - - 0.00000000000000000000000001538 121.0
DYD1_k127_1188385_2 PFAM acyl-CoA dehydrogenase domain protein K00249 - 1.3.8.7 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006029 474.0
DYD1_k127_1188385_3 PFAM acyl-CoA dehydrogenase domain protein - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002862 396.0
DYD1_k127_1188385_4 Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily K02015 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002543 368.0
DYD1_k127_1188385_5 Coenzyme A transferase K01039 - 2.8.3.12 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000073 304.0
DYD1_k127_1188385_6 PFAM beta-lactamase domain protein - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000437 273.0
DYD1_k127_1188385_7 Coenzyme A transferase K01040 - 2.8.3.12 0.000000000000000000000000000000000000000000000000000000000000000000000000008572 270.0
DYD1_k127_1188385_8 periplasmic binding protein K02016 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000008478 260.0
DYD1_k127_1188385_9 PFAM ABC transporter related K02013 - 3.6.3.34 0.00000000000000000000000000000000000000000000000000000000000001994 225.0
DYD1_k127_1189202_0 Belongs to the Glu Leu Phe Val dehydrogenases family K00261 - 1.4.1.3 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000265 456.0
DYD1_k127_1189202_1 Formate/nitrite transporter K06212 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009035 321.0
DYD1_k127_1189202_2 Transcriptional regulatory protein, C terminal K07667 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000008414 268.0
DYD1_k127_1189202_3 His Kinase A (phosphoacceptor) domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000005351 244.0
DYD1_k127_1189202_4 Cupin domain - - - 0.000000000000000000000000000000000001535 146.0
DYD1_k127_1189202_5 AraC-like ligand binding domain - - - 0.0000000000000000000000476 102.0
DYD1_k127_1189202_6 AsnC family transcriptional regulator - - - 0.0000000008987 62.0
DYD1_k127_1189202_7 amino acid-binding ACT domain protein K04767 - - 0.00000006915 55.0
DYD1_k127_1189202_8 Serine aminopeptidase, S33 K03928 - 3.1.1.1 0.00001983 49.0
DYD1_k127_1211231_0 Sigma-70 region 2 K03088 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003778 431.0
DYD1_k127_1211231_1 Transcriptional regulator - - - 0.000000000000000000000000000000000000000000000000000000000000000000006049 241.0
DYD1_k127_1211231_2 Endoribonuclease L-PSP - - - 0.000000000000000000000000000000000000000000000000000186 207.0
DYD1_k127_1211231_3 F420H(2)-dependent quinone reductase - - - 0.0000000000000000000000000000000000000000000000000002912 189.0
DYD1_k127_1211231_4 EamA-like transporter family - - - 0.0000000000000000000000000000000000000000000000416 183.0
DYD1_k127_1211231_5 YCII-related domain - - - 0.000000000000000000000000002316 115.0
DYD1_k127_1211231_6 3-demethylubiquinone-9 3-methyltransferase - - - 0.0000000000000326 74.0
DYD1_k127_121253_0 ABC transporter - - - 0.0 1073.0
DYD1_k127_121253_1 Major facilitator superfamily K08151 - - 0.00000000000000000000000000000000000000000000005804 186.0
DYD1_k127_121253_2 Acetyltransferase (GNAT) family - - - 0.0000000000000000000000000002838 123.0
DYD1_k127_121253_3 Belongs to the sigma-70 factor family. ECF subfamily K03088 - - 0.00000000004691 66.0
DYD1_k127_1250020_0 synthetase (ADP forming), alpha K01905,K09181,K22224 - 6.2.1.13 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000295 507.0
DYD1_k127_1250020_1 PFAM DRTGG domain protein K06873 - - 0.000000000000000000000000000000000000000000000000000000000000000000004843 247.0
DYD1_k127_1250020_2 histidine kinase A domain protein - - - 0.00000000000000000000000000000000000000000000000000001526 210.0
DYD1_k127_1268693_0 LysM domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000047 327.0
DYD1_k127_1268693_1 response regulator - - - 0.0000000000000000000000000000000000000000000000000000000000000000005482 241.0
DYD1_k127_1268693_2 histidine kinase, dimerisation and phosphoacceptor region - - - 0.0000000000000000000000000000000003098 147.0
DYD1_k127_1268693_3 Antibiotic biosynthesis monooxygenase - - - 0.000000000000000000000000002035 115.0
DYD1_k127_1268693_4 GAF domain K02480 - 2.7.13.3 0.0000093 58.0
DYD1_k127_1282579_0 ATPase activity K01990 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004342 431.0
DYD1_k127_1282579_1 Transport permease protein K01992 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001613 346.0
DYD1_k127_1282579_2 ABC-2 type transporter K01992 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001033 351.0
DYD1_k127_1282579_3 L-lactate permease K03303 - - 0.0000000000000000000000000000000000000000000000000000000000116 229.0
DYD1_k127_1282579_4 serine threonine protein kinase K08884,K12132 - 2.7.11.1 0.00000000000000000000001502 106.0
DYD1_k127_1292224_0 In eubacteria ppGpp (guanosine 3'-diphosphate 5-' diphosphate) is a mediator of the stringent response that coordinates a variety of cellular activities in response to changes in nutritional abundance K00951 - 2.7.6.5 9.659e-240 753.0
DYD1_k127_1292224_1 PFAM extracellular solute-binding protein, family 5 K02035 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000001066 269.0
DYD1_k127_1292224_2 PFAM RNA binding S1 domain protein - - - 0.000000000000000000000000000000000000007459 154.0
DYD1_k127_1292224_3 VKc - - - 0.00000000000000000000001005 107.0
DYD1_k127_1293770_0 PBP superfamily domain K02040 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002416 424.0
DYD1_k127_1293770_1 Glucose / Sorbosone dehydrogenase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001916 407.0
DYD1_k127_1293770_2 probably responsible for the translocation of the substrate across the membrane K02037 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002826 372.0
DYD1_k127_1293770_3 3'(2'),5'-bisphosphate nucleotidase K01082 - 3.1.3.7 0.00000000000000000000000000000000000000000000000000000000000000000000000000000143 273.0
DYD1_k127_1293770_4 PFAM response regulator receiver K02483,K07658,K07668 - - 0.000000000000000000000000000000000000000000000000000001552 219.0
DYD1_k127_1293770_5 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain K07636 - 2.7.13.3 0.000000000000000000000000000000000000000000000000002845 196.0
DYD1_k127_1293770_6 YwiC-like protein - - - 0.00006231 54.0
DYD1_k127_1293770_7 methyltransferase activity - - - 0.0004094 51.0
DYD1_k127_1312967_0 metal-dependent phosphohydrolase, HD sub domain K07037 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006539 518.0
DYD1_k127_1312967_1 Yqey-like protein K09117 - - 0.0000000000000000000000000000000003015 138.0
DYD1_k127_1312967_3 Single strand-specific metallo-endoribonuclease involved in late-stage 70S ribosome quality control and in maturation of the 3' terminus of the 16S rRNA K07042 - - 0.000000000000000000000003103 109.0
DYD1_k127_1312967_4 PFAM diacylglycerol kinase K00901 - 2.7.1.107 0.000000000000000001285 93.0
DYD1_k127_1312967_5 PFAM Metal-dependent phosphohydrolase, HD - - - 0.0000000003467 72.0
DYD1_k127_1312967_6 Tetratricopeptide repeat - - - 0.000000001426 70.0
DYD1_k127_1312967_7 Electron transfer flavoprotein domain K03521 - - 0.000000001617 61.0
DYD1_k127_132050_0 PTS system Galactitol-specific IIC component K02775 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000742 365.0
DYD1_k127_132050_1 DeoR C terminal sensor domain K02081,K02444,K03436 - - 0.0000000000000000000000000000000000000000000000000000006485 201.0
DYD1_k127_132050_2 Activator of Hsp90 ATPase - - - 0.0000000000000000000000000001554 120.0
DYD1_k127_132050_3 helix_turn_helix, Arsenical Resistance Operon Repressor - - - 0.000000000000000000000000004219 115.0
DYD1_k127_132050_4 Activator of Hsp90 ATPase homolog 1-like protein - - - 0.00000000000000000002651 100.0
DYD1_k127_132050_5 PTS system, Lactose/Cellobiose specific IIB subunit K02774 - 2.7.1.200 0.000000000003843 70.0
DYD1_k127_1338150_0 - K03561,K12287 - - 0.0000000000000000000000000000000000000000000002491 196.0
DYD1_k127_1338150_1 Belongs to the peptidase S8 family K12287 - - 0.0000000000000000000000000000000000003635 166.0
DYD1_k127_1338150_2 Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain - - - 0.0000000000000000002147 104.0
DYD1_k127_1338150_3 - K01278,K03561 - 3.4.14.5 0.00002159 61.0
DYD1_k127_1359722_0 PFAM Major Facilitator Superfamily - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000355 494.0
DYD1_k127_1359722_1 Chromate transporter K07240 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001564 413.0
DYD1_k127_1359722_10 Glutathione synthase Ribosomal protein S6 modification enzyme (Glutaminyl transferase) K03802,K05844 - 6.3.2.29,6.3.2.30 0.0000000000000000000000000000000000000000000007496 183.0
DYD1_k127_1359722_11 - - - - 0.000004243 57.0
DYD1_k127_1359722_2 Coenzyme A transferase K01040 - 2.8.3.12 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000001187 295.0
DYD1_k127_1359722_3 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000117 298.0
DYD1_k127_1359722_4 Coenzyme A transferase K01039 - 2.8.3.12 0.00000000000000000000000000000000000000000000000000000000000000000000000000000002046 281.0
DYD1_k127_1359722_5 coenzyme F420-1:gamma-L-glutamate ligase activity - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000002288 259.0
DYD1_k127_1359722_6 Transcriptional regulatory protein, C terminal - - - 0.00000000000000000000000000000000000000000000000000000000000000000000003425 257.0
DYD1_k127_1359722_7 - - - - 0.000000000000000000000000000000000000000000000000000000000000005999 219.0
DYD1_k127_1359722_8 membrane - - - 0.0000000000000000000000000000000000000000000000000000000004431 208.0
DYD1_k127_1359722_9 Putative inner membrane exporter, YdcZ K09936 - - 0.0000000000000000000000000000000000000000000000000008263 186.0
DYD1_k127_1375522_0 Polynucleotide adenylyltransferase region K00974 - 2.7.7.72 7.874e-237 760.0
DYD1_k127_1375522_1 Alpha amylase, catalytic domain K01208 - 3.2.1.133,3.2.1.135,3.2.1.54 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003412 480.0
DYD1_k127_1375522_10 phosphorelay signal transduction system - - - 0.0000000000000000000000001402 110.0
DYD1_k127_1375522_11 Protein of unknown function (DUF503) K09764 - - 0.0000000000000001028 84.0
DYD1_k127_1375522_12 ABC-type sugar transport system, periplasmic component K02027 - - 0.0000007247 62.0
DYD1_k127_1375522_2 LysM domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002987 474.0
DYD1_k127_1375522_3 LysM domain K03046,K03641,K08642 - 2.7.7.6 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002478 466.0
DYD1_k127_1375522_4 LysM domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000303 427.0
DYD1_k127_1375522_5 PhoQ Sensor - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001026 345.0
DYD1_k127_1375522_6 Transcriptional regulatory protein, C terminal K07667 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000003763 292.0
DYD1_k127_1375522_7 PFAM Biotin lipoate A B protein ligase K03800 - 6.3.1.20 0.000000000000000000000000000000000000000000000000000000000000000000000003676 258.0
DYD1_k127_1375522_8 Participates in both transcription termination and antitermination K02600 - - 0.0000000000000000000000000000000000000000000000000000000000000000003799 234.0
DYD1_k127_1375522_9 GAF domain - - - 0.000000000000000000000000000000000000000000008417 178.0
DYD1_k127_1390556_0 amino acid - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000643 308.0
DYD1_k127_1390556_1 metallophosphoesterase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000001347 306.0
DYD1_k127_1390556_2 PFAM cyclase family protein K07130 - 3.5.1.9 0.0000000000000000000000000000000000000000000000000000000000000000000000000003075 261.0
DYD1_k127_1390556_3 - - - - 0.00000000000000000000000000000000000000000000001395 183.0
DYD1_k127_1390556_4 Transcriptional regulator IclR K13641,K19333 - - 0.00000000000000000000000000000000000000000000372 174.0
DYD1_k127_1477339_0 amidinotransferase K00613 - 2.1.4.1 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007308 456.0
DYD1_k127_1477339_1 AI-2E family transporter - - - 0.0000000000000000000000000000002839 132.0
DYD1_k127_1477339_2 Transcriptional regulator, GntR family - - - 0.000000000000000000000002421 113.0
DYD1_k127_1477339_4 COGs COG1680 Beta-lactamase class C and other penicillin binding protein - - - 0.000000003732 62.0
DYD1_k127_1481890_0 Oxidoreductase required for the transfer of electrons from pyruvate to flavodoxin K00169,K03737 - 1.2.7.1 1.841e-297 927.0
DYD1_k127_1481890_1 Heat shock 70 kDa protein K04043 - - 3.942e-294 913.0
DYD1_k127_1481890_10 Belongs to the MenA family. Type 1 subfamily - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000001255 306.0
DYD1_k127_1481890_11 Glycosyltransferase like family 2 - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000002031 301.0
DYD1_k127_1481890_12 histidine kinase A domain protein - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000001802 315.0
DYD1_k127_1481890_13 Belongs to the purine pyrimidine phosphoribosyltransferase family K00760 - 2.4.2.8 0.00000000000000000000000000000000000000000000000000000004156 201.0
DYD1_k127_1481890_14 Integral membrane protein DUF92 - - - 0.00000000000000000000000000000000000000000000008997 180.0
DYD1_k127_1481890_15 - - - - 0.0000000000000000000000000000000000000000000004992 177.0
DYD1_k127_1481890_16 methyltransferase activity K21310 - 2.1.1.334 0.0000000000000000000000000000000000000000003965 165.0
DYD1_k127_1481890_17 Protein of unknown function (DUF1684) K09164 - - 0.000000000000000000000000000000000000000007929 174.0
DYD1_k127_1481890_18 Psort location Cytoplasmic, score K00760 - 2.4.2.8 0.0000000000000000000000000000000001355 136.0
DYD1_k127_1481890_2 Bacterial extracellular solute-binding proteins, family 5 Middle K02035 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006174 615.0
DYD1_k127_1481890_20 DinB family - - - 0.0000000000008832 75.0
DYD1_k127_1481890_3 Catalyzes the synthesis of ADP-glucose, a sugar donor used in elongation reactions on alpha-glucans K00975 - 2.7.7.27 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008938 519.0
DYD1_k127_1481890_4 Belongs to the ABC transporter superfamily K02032,K10823 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006454 502.0
DYD1_k127_1481890_5 Belongs to the ABC transporter superfamily K02031 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001154 476.0
DYD1_k127_1481890_6 ABC-type dipeptide oligopeptide nickel transport systems, permease components K02033,K12369 GO:0005575,GO:0005623,GO:0005886,GO:0016020,GO:0044464,GO:0071944 - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008624 468.0
DYD1_k127_1481890_7 ABC-type dipeptide oligopeptide nickel transport systems, permease components K02034,K12370 GO:0005575,GO:0005623,GO:0005886,GO:0016020,GO:0044464,GO:0071944 - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000398 418.0
DYD1_k127_1481890_8 Belongs to the class-IV pyridoxal-phosphate-dependent aminotransferase family K00826 - 2.6.1.42 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006353 354.0
DYD1_k127_1481890_9 Catalyzes the conversion of dihydroorotate to orotate K00226 - 1.3.98.1 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008491 307.0
DYD1_k127_1491126_0 Protein of unknown function (DUF3179) - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001631 453.0
DYD1_k127_1491126_1 ATP-grasp domain K01945 - 6.3.4.13 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000154 383.0
DYD1_k127_1491126_2 Domain of unknown function (DUF362) - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005107 338.0
DYD1_k127_1491126_3 - - - - 0.00000000000000000000000000000000000000000000000000000000000000003272 247.0
DYD1_k127_1491126_4 Serine threonine protein kinase - - - 0.000000000000000000000000000000000000000000000000000000000003928 222.0
DYD1_k127_1491126_5 iron-sulfur cluster assembly K07400,K13628 - - 0.000000000000000000000000000000000000000000000002235 180.0
DYD1_k127_1491126_6 Belongs to the thioredoxin family K03671 - - 0.000000000000000000000000000000000000008764 148.0
DYD1_k127_1491126_7 DNA-templated transcription, initiation K03088 - - 0.00000000000000000000000000000000001165 143.0
DYD1_k127_1491126_8 cheY-homologous receiver domain - - - 0.000000000000000001146 91.0
DYD1_k127_1505057_0 PFAM glycosyl transferase, family 51 - - - 0.0 1128.0
DYD1_k127_1505057_1 N-4 methylation of cytosine K00590 - 2.1.1.113 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000369 411.0
DYD1_k127_1505057_2 - - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009232 368.0
DYD1_k127_1505057_3 peptidase dimerisation domain protein K01295 - 3.4.17.11 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003557 342.0
DYD1_k127_1505057_4 NAD(P)H-binding K01784 - 5.1.3.2 0.000000000000000002018 85.0
DYD1_k127_1516279_0 Receptor family ligand binding region K01999 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001956 364.0
DYD1_k127_1516279_1 Catalyzes the transfer of a dimethylallyl group onto the adenine at position 37 in tRNAs that read codons beginning with uridine, leading to the formation of N6-(dimethylallyl)adenosine (i(6)A) K00791 GO:0003674,GO:0003824,GO:0006139,GO:0006396,GO:0006399,GO:0006400,GO:0006725,GO:0006807,GO:0008033,GO:0008150,GO:0008152,GO:0009451,GO:0009987,GO:0010467,GO:0016070,GO:0016740,GO:0016765,GO:0034470,GO:0034641,GO:0034660,GO:0043170,GO:0043412,GO:0044237,GO:0044238,GO:0046483,GO:0052381,GO:0071704,GO:0090304,GO:0140098,GO:0140101,GO:1901360 2.5.1.75 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002789 306.0
DYD1_k127_1516279_2 Belongs to the binding-protein-dependent transport system permease family K01997 - - 0.0000000000000000000000000000000000000000000000000000004695 200.0
DYD1_k127_1516279_3 Belongs to the UPF0102 family K07460 - - 0.000000000000000000000006866 106.0
DYD1_k127_1516279_4 phosphate transporter K03306 - - 0.00000000001052 66.0
DYD1_k127_1544917_0 Part of the Sec protein translocase complex. Interacts with the SecYEG preprotein conducting channel. SecDF uses the proton motive force (PMF) to complete protein translocation after the ATP-dependent function of SecA K03072 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000348 419.0
DYD1_k127_1544917_1 Part of the Sec protein translocase complex. Interacts with the SecYEG preprotein conducting channel. SecDF uses the proton motive force (PMF) to complete protein translocation after the ATP-dependent function of SecA K03074 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000073 336.0
DYD1_k127_1544917_2 phosphorelay signal transduction system - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000005271 263.0
DYD1_k127_1544917_3 Transcriptional regulator of aromatic amino acids metabolism K01768 - 4.6.1.1 0.0000000000000000000000000000000000000000000000000000000002512 225.0
DYD1_k127_1544917_4 PFAM TadE family protein K12287 - - 0.00000000000000000000000000000000000000000988 173.0
DYD1_k127_1544917_5 PFAM TadE family protein K12287 - - 0.000000000000000000000000000000000000003624 166.0
DYD1_k127_1544917_6 PFAM Stage II sporulation E family protein - - - 0.0000000000000000000000000000000000002847 145.0
DYD1_k127_1544917_7 Phosphorylation of dTMP to form dTDP in both de novo and salvage pathways of dTTP synthesis - - - 0.00000000000000000000000000001648 123.0
DYD1_k127_1590628_0 Endoribonuclease that initiates mRNA decay K18682 - - 9.354e-204 661.0
DYD1_k127_1590628_1 Major facilitator Superfamily - - - 0.00000000000000000000000000000000000000000000000000000000001715 222.0
DYD1_k127_1590628_2 Modulates RecA activity K03565,K19002 GO:0003674,GO:0005488,GO:0005515,GO:0006950,GO:0006974,GO:0007154,GO:0008150,GO:0009432,GO:0009605,GO:0009987,GO:0009991,GO:0019899,GO:0031668,GO:0033554,GO:0043086,GO:0044092,GO:0050790,GO:0050896,GO:0051716,GO:0065007,GO:0065009,GO:0071496 2.4.1.337 0.00000000000000000000000000004714 127.0
DYD1_k127_1590628_3 Radical SAM - - - 0.000000276 54.0
DYD1_k127_1621398_0 Aldehyde dehydrogenase family K00128 - 1.2.1.3 1.239e-210 665.0
DYD1_k127_1621398_1 IMP dehydrogenase activity K03406,K15371 - 1.4.1.2 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000004769 292.0
DYD1_k127_1621398_2 EamA-like transporter family K03298 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000022 272.0
DYD1_k127_1621398_3 protein secretion by the type VII secretion system - - - 0.000001794 59.0
DYD1_k127_1621398_4 sh3 domain protein K12132,K15539 - 2.7.11.1 0.00002742 54.0
DYD1_k127_1642006_0 COGs COG1136 ABC-type antimicrobial peptide transport system ATPase component K02003 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002288 372.0
DYD1_k127_1642006_1 alkyl hydroperoxide reductase Thiol specific antioxidant Mal allergen K02199 - - 0.00000000000000000000000000000000000000003082 164.0
DYD1_k127_1642006_2 efflux transmembrane transporter activity K02004 - - 0.000000000000000000008567 94.0
DYD1_k127_1642006_3 Protein of unknown function (DUF1573) - - - 0.000000000001886 75.0
DYD1_k127_1642006_4 COG NOG19146 non supervised orthologous group - - - 0.000000000003776 72.0
DYD1_k127_1731354_0 PFAM band 7 protein - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001332 420.0
DYD1_k127_1731354_1 acetyltransferase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003217 336.0
DYD1_k127_1731354_2 Binds to the 23S rRNA K02939 GO:0003674,GO:0003676,GO:0003723,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0006412,GO:0006518,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0015934,GO:0019538,GO:0022625,GO:0022626,GO:0032991,GO:0034641,GO:0034645,GO:0043043,GO:0043170,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:0071704,GO:0097159,GO:1901363,GO:1901564,GO:1901566,GO:1901576,GO:1990904 - 0.00000000000000000000000000000000000000000000000594 183.0
DYD1_k127_1731354_3 SMART helix-turn-helix domain protein K15539 - - 0.000000000000000000000000000000001889 141.0
DYD1_k127_1731354_4 acetyltransferase K03789 - 2.3.1.128 0.0000000000000000000000000007722 120.0
DYD1_k127_1731354_5 - K07403 - - 0.000000000000000000000001515 118.0
DYD1_k127_1731354_6 lipoprotein biosynthetic process K13292 - - 0.000000000000000000000151 108.0
DYD1_k127_1735555_0 Protein of unknown function, DUF255 K06888 - - 4.654e-210 675.0
DYD1_k127_1735555_1 Participates in chromosomal partition during cell division. May act via the formation of a condensin-like complex containing Smc and ScpB that pull DNA away from mid-cell into both cell halves K05896 - - 0.0000000000000000000000000000000000000000000000000000000000672 213.0
DYD1_k127_1735555_2 Methyltransferase required for the conversion of demethylmenaquinol (DMKH2) to menaquinol (MKH2) K03183 - 2.1.1.163,2.1.1.201 0.0000000000000000000000000000000000000000000000001066 188.0
DYD1_k127_1735555_3 Belongs to the thioredoxin family K03671 GO:0003674,GO:0003824,GO:0004791,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006950,GO:0006979,GO:0008150,GO:0008152,GO:0009636,GO:0009987,GO:0015035,GO:0015036,GO:0016209,GO:0016491,GO:0016651,GO:0016667,GO:0016668,GO:0016671,GO:0019725,GO:0033554,GO:0034599,GO:0042221,GO:0042592,GO:0044424,GO:0044444,GO:0044464,GO:0045454,GO:0047134,GO:0050789,GO:0050794,GO:0050896,GO:0051716,GO:0055114,GO:0065007,GO:0065008,GO:0070887,GO:0097237,GO:0098754,GO:0098869,GO:1990748 - 0.0000000000000000000000000000000000000000000001965 175.0
DYD1_k127_1735555_4 Conversion of 1,4-dihydroxy-2-naphthoate (DHNA) to demethylmenaquinone (DMK) K02548 - 2.5.1.74 0.0000000000000000000000000000000000004065 150.0
DYD1_k127_1735555_5 PFAM luciferase-like K00320 - 1.5.98.2 0.0000000000000000000004425 108.0
DYD1_k127_1735555_6 Catalyzes the condensation reaction of fatty acid synthesis by the addition to an acyl acceptor of two carbons from malonyl-ACP. Catalyzes the first condensation reaction which initiates fatty acid synthesis and may therefore play a role in governing the total rate of fatty acid production. Possesses both acetoacetyl-ACP synthase and acetyl transacylase activities. Its substrate specificity determines the biosynthesis of branched- chain and or straight-chain of fatty acids K00648 - 2.3.1.180 0.0000000000000000005921 90.0
DYD1_k127_1735555_7 VanZ like family - - - 0.000000000002647 80.0
DYD1_k127_1749495_0 Acts as a processive, ATP-dependent zinc metallopeptidase for both cytoplasmic and membrane proteins. Plays a role in the quality control of integral membrane proteins K03798 - - 2.343e-279 871.0
DYD1_k127_1749495_1 DNA ligase that catalyzes the formation of phosphodiester linkages between 5'-phosphoryl and 3'-hydroxyl groups in double-stranded DNA using NAD as a coenzyme and as the energy source for the reaction. It is essential for DNA replication and repair of damaged DNA K01972 GO:0003674,GO:0003824,GO:0003909,GO:0003911,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006139,GO:0006259,GO:0006266,GO:0006281,GO:0006284,GO:0006288,GO:0006725,GO:0006807,GO:0006950,GO:0006974,GO:0008150,GO:0008152,GO:0009987,GO:0016874,GO:0016886,GO:0033554,GO:0034641,GO:0043170,GO:0044237,GO:0044238,GO:0044260,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0050896,GO:0051103,GO:0051716,GO:0071704,GO:0090304,GO:0140097,GO:1901360 6.5.1.2 1.526e-252 795.0
DYD1_k127_1749495_10 4Fe-4S dicluster domain - - - 0.000000000000000000000000000000000004179 143.0
DYD1_k127_1749495_11 Bacterial lipid A biosynthesis acyltransferase K02517 - 2.3.1.241 0.000000000000004056 88.0
DYD1_k127_1749495_12 Membrane-associated phospholipid phosphatase K19302 - 3.6.1.27 0.000000001173 66.0
DYD1_k127_1749495_2 Belongs to the formate--tetrahydrofolate ligase family K00288,K01938 GO:0003674,GO:0003824,GO:0004329,GO:0004477,GO:0004488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006082,GO:0006139,GO:0006144,GO:0006575,GO:0006725,GO:0006732,GO:0006760,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009108,GO:0009112,GO:0009113,GO:0009256,GO:0009257,GO:0009396,GO:0009987,GO:0016053,GO:0016491,GO:0016645,GO:0016646,GO:0016787,GO:0016810,GO:0016814,GO:0016874,GO:0016879,GO:0018130,GO:0019238,GO:0019438,GO:0019752,GO:0034641,GO:0042398,GO:0042440,GO:0042558,GO:0042559,GO:0043436,GO:0043603,GO:0043604,GO:0043648,GO:0043650,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0044283,GO:0044424,GO:0044464,GO:0046112,GO:0046148,GO:0046394,GO:0046483,GO:0046653,GO:0046654,GO:0051186,GO:0051188,GO:0055086,GO:0055114,GO:0071704,GO:0072521,GO:0072522,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576 1.5.1.5,3.5.4.9,6.3.4.3 3.3e-247 777.0
DYD1_k127_1749495_3 PFAM AMP-dependent synthetase K01897 - 6.2.1.3 1.153e-231 729.0
DYD1_k127_1749495_4 His Kinase A (phosphoacceptor) domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001415 582.0
DYD1_k127_1749495_5 Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family K00823 - 2.6.1.19 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005053 563.0
DYD1_k127_1749495_6 4Fe-4S ferredoxin iron-sulfur binding domain protein K03388 - 1.8.7.3,1.8.98.4,1.8.98.5,1.8.98.6 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001575 496.0
DYD1_k127_1749495_7 Heterodisulfide reductase subunit B K03389 - 1.8.7.3,1.8.98.4,1.8.98.5,1.8.98.6 0.000000000000000000000000000000000000000000000000000000000000000000000000001081 273.0
DYD1_k127_1749495_8 CpXC protein - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000004886 270.0
DYD1_k127_1749495_9 Belongs to the CDP-alcohol phosphatidyltransferase class-I family K00995,K00999,K08744,K17103 - 2.7.8.11,2.7.8.41,2.7.8.5,2.7.8.8 0.000000000000000000000000000000000003681 146.0
DYD1_k127_175022_0 Two component transcriptional regulator, winged helix family K07669 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004619 334.0
DYD1_k127_175022_1 Binds directly to 23S rRNA. The L1 stalk is quite mobile in the ribosome, and is involved in E site tRNA release K02863 GO:0000470,GO:0003674,GO:0003676,GO:0003723,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0006139,GO:0006364,GO:0006396,GO:0006412,GO:0006518,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0015934,GO:0016070,GO:0016072,GO:0019538,GO:0022613,GO:0022625,GO:0022626,GO:0032991,GO:0034470,GO:0034641,GO:0034645,GO:0034660,GO:0042254,GO:0042273,GO:0043043,GO:0043170,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043603,GO:0043604,GO:0044085,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:0046483,GO:0071704,GO:0071840,GO:0090304,GO:0097159,GO:1901360,GO:1901363,GO:1901564,GO:1901566,GO:1901576,GO:1990904 - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001242 313.0
DYD1_k127_175022_2 Forms part of the ribosomal stalk which helps the ribosome interact with GTP-bound translation factors. Is thus essential for accurate translation K02935 - - 0.0000000000000000000000000000000000000001678 154.0
DYD1_k127_175022_3 Forms part of the ribosomal stalk, playing a central role in the interaction of the ribosome with GTP-bound translation factors K02864 GO:0003674,GO:0003735,GO:0005198,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0006412,GO:0006518,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0015934,GO:0019538,GO:0022625,GO:0022626,GO:0032991,GO:0034641,GO:0034645,GO:0043043,GO:0043170,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:0071704,GO:1901564,GO:1901566,GO:1901576,GO:1990904 - 0.000000000000000000000000000000291 129.0
DYD1_k127_175022_4 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase - - - 0.0000000000000000000001205 110.0
DYD1_k127_1750567_0 Catalyzes the condensation of (S)-aspartate-beta- semialdehyde (S)-ASA and pyruvate to 4-hydroxy- tetrahydrodipicolinate (HTPA) K01714 - 4.3.3.7 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001635 325.0
DYD1_k127_1750567_1 Catalyzes the NAD( )-dependent oxidation of L-threonine to 2-amino-3-ketobutyrate K00060 - 1.1.1.103 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001397 329.0
DYD1_k127_1750567_2 Beta-lactamase superfamily domain K03476 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000218 319.0
DYD1_k127_1750567_3 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase K00020 - 1.1.1.31 0.0000000000000000000000000000000000000000000000000000000000000006366 229.0
DYD1_k127_1750567_4 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase K00020 - 1.1.1.31 0.000000000000000000000000000000000000000000000000000000000003414 219.0
DYD1_k127_1750567_5 enzyme involved in inositol metabolism K03337 - 5.3.1.30 0.00000000000000000000000000000000000001069 151.0
DYD1_k127_1750567_6 Aerobic-type carbon monoxide dehydrogenase, middle subunit CoxM K20445 - 1.17.1.5 0.0000000000000000000000000008142 118.0
DYD1_k127_1755132_0 ABC-2 family transporter protein K01992 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001229 447.0
DYD1_k127_1755132_1 Bacterial capsule synthesis protein PGA_cap K07282 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002245 417.0
DYD1_k127_1755132_2 ATPases associated with a variety of cellular activities K01990 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004381 349.0
DYD1_k127_1755132_3 PFAM ABC transporter related K01990 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009402 340.0
DYD1_k127_1755132_4 PFAM secretion protein HlyD family protein K01993 - - 0.0000000000000000000000000000000000003995 160.0
DYD1_k127_1755132_5 Formiminotransferase domain, N-terminal subdomain K00603,K13990 - 2.1.2.5,4.3.1.4 0.0000000000000000000000000000000001474 138.0
DYD1_k127_1755132_6 transcriptional regulator - - - 0.0000127 51.0
DYD1_k127_1782366_0 TIGRFAM phosphate binding protein K02040 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006946 368.0
DYD1_k127_1782366_1 Part of the ABC transporter complex PstSACB involved in phosphate import. Responsible for energy coupling to the transport system K02036 - 3.6.3.27 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001656 344.0
DYD1_k127_1782366_2 probably responsible for the translocation of the substrate across the membrane K02037 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000182 322.0
DYD1_k127_1782366_3 Plays a role in the regulation of phosphate uptake K02039 - - 0.000000000000000000000000000000000000000000000000000000000000001208 225.0
DYD1_k127_1782366_4 Binding-protein-dependent transport system inner membrane component K02050,K15599 - - 0.0002554 50.0
DYD1_k127_1784635_0 Deoxynucleoside kinase K15518 - 2.7.1.113 0.00000000000000000000000000000000000000000000000000000000000000000000000000007128 265.0
DYD1_k127_1784635_1 PHP domain K04486 - 3.1.3.15 0.000000000000000000000000000000000000000000000000000000000000001684 230.0
DYD1_k127_1784635_2 Belongs to the N(4) N(6)-methyltransferase family - - - 0.0000000000000000000000000000000000000000000000000000000000005859 220.0
DYD1_k127_1784635_3 Catalyzes the transfer of endogenously produced octanoic acid from octanoyl-acyl-carrier-protein onto the lipoyl domains of lipoate-dependent enzymes. Lipoyl-ACP can also act as a substrate although octanoyl-ACP is likely to be the physiological substrate K03644,K03801 GO:0003674,GO:0003824,GO:0006464,GO:0006807,GO:0008150,GO:0008152,GO:0009249,GO:0009987,GO:0010467,GO:0016740,GO:0016746,GO:0016747,GO:0018065,GO:0018193,GO:0018205,GO:0019538,GO:0033819,GO:0036211,GO:0043170,GO:0043412,GO:0044237,GO:0044238,GO:0044260,GO:0044267,GO:0051604,GO:0071704,GO:1901564 2.3.1.181,2.8.1.8 0.00000000000000000000000000000000000000009378 169.0
DYD1_k127_1784635_4 Deoxynucleoside kinase - - - 0.0000000000000000000000000000405 124.0
DYD1_k127_1784635_5 Patatin-like phospholipase - - - 0.000000000000000000000000006247 126.0
DYD1_k127_1784635_6 - - - - 0.0000000000000000000001618 109.0
DYD1_k127_1784635_7 - - - - 0.000000000000000000001131 105.0
DYD1_k127_1784635_8 PFAM glycosyl transferase, family 51 - - - 0.00000000000000000004897 98.0
DYD1_k127_1795983_0 4Fe-4S ferredoxin iron-sulfur binding domain protein K03388 - 1.8.7.3,1.8.98.4,1.8.98.5,1.8.98.6 0.0 1573.0
DYD1_k127_1795983_1 heterodisulfide reductase K03389 - 1.8.7.3,1.8.98.4,1.8.98.5,1.8.98.6 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001684 461.0
DYD1_k127_1795983_10 Cro/C1-type HTH DNA-binding domain - - - 0.000000000000000007335 91.0
DYD1_k127_1795983_11 Methyl-viologen-reducing hydrogenase, delta subunit - - - 0.00000000000000003181 81.0
DYD1_k127_1795983_2 PFAM Methylenetetrahydrofolate reductase K00297,K00547 - 1.5.1.20,2.1.1.10 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005106 433.0
DYD1_k127_1795983_3 PFAM Methylene-tetrahydrofolate reductase C terminal - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001656 320.0
DYD1_k127_1795983_4 CobQ/CobB/MinD/ParA nucleotide binding domain K07321 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000003834 276.0
DYD1_k127_1795983_5 amino acid-binding ACT domain protein K04767 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000009475 253.0
DYD1_k127_1795983_6 Methyl-viologen-reducing hydrogenase, delta subunit - - - 0.0000000000000000000000000000000000000000000000001528 186.0
DYD1_k127_1795983_7 Histidine kinase - - - 0.000000000000000000000000000000000005405 156.0
DYD1_k127_1795983_8 Histidine kinase - - - 0.000000000000000000000000000004303 135.0
DYD1_k127_1795983_9 Methyl-viologen-reducing hydrogenase, delta subunit - - - 0.00000000000000000003724 91.0
DYD1_k127_1820676_0 amidinotransferase K00613 - 2.1.4.1 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003296 465.0
DYD1_k127_1820676_1 Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family K00822,K00833 - 2.6.1.18,2.6.1.62 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000118 453.0
DYD1_k127_1820676_10 Protein of unknown function (DUF1847) - - - 0.00000000000000000000000000000000000000000000000000000001135 207.0
DYD1_k127_1820676_11 FCD K05799 - - 0.000000000000000000000000005885 120.0
DYD1_k127_1820676_2 PFAM ABC transporter related K02028,K09972 - 3.6.3.21 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009965 314.0
DYD1_k127_1820676_3 Peptidase dimerisation domain K01439 - 3.5.1.18 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000002205 310.0
DYD1_k127_1820676_4 PFAM ABC transporter K01996 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000001688 281.0
DYD1_k127_1820676_5 Zinc-binding dehydrogenase K00344 - 1.6.5.5 0.0000000000000000000000000000000000000000000000000000000000000000000000000000001613 274.0
DYD1_k127_1820676_6 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain K00609 - 2.1.3.2 0.000000000000000000000000000000000000000000000000000000000000000000000000000006865 274.0
DYD1_k127_1820676_7 Binding-protein-dependent transport system inner membrane component K02029 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000002421 267.0
DYD1_k127_1820676_8 Abc transporter K01995 - - 0.0000000000000000000000000000000000000000000000000000000000000000003313 236.0
DYD1_k127_1820676_9 Bacterial periplasmic substrate-binding proteins K02030 - - 0.000000000000000000000000000000000000000000000000000000008957 207.0
DYD1_k127_1822380_0 PFAM amine oxidase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001328 597.0
DYD1_k127_1822380_1 pyrroloquinoline quinone binding - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003123 431.0
DYD1_k127_1822380_2 PFAM conserved K07027 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001902 406.0
DYD1_k127_1822380_3 PFAM Protein kinase domain K12132 - 2.7.11.1 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002364 373.0
DYD1_k127_1822380_4 Voltage gated chloride channel K03281 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000003615 281.0
DYD1_k127_1822380_5 PFAM zinc finger, SWIM domain protein - - - 0.0000000000000000000000000001308 118.0
DYD1_k127_1822380_6 Diguanylate cyclase - - - 0.00000000000000000000000006975 119.0
DYD1_k127_1822380_7 Ribosomal protein L11 methyltransferase (PrmA) K05929 - 2.1.1.103 0.000000000000000000000001006 117.0
DYD1_k127_1822380_8 TIGRFAM asparagine synthase (glutamine-hydrolyzing) K01953 - 6.3.5.4 0.00000000000000002848 87.0
DYD1_k127_1840711_0 N-terminal 7TM region of histidine kinase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008292 438.0
DYD1_k127_1840711_1 4Fe-4S binding domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001583 418.0
DYD1_k127_1840711_2 PFAM aldo keto reductase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002608 365.0
DYD1_k127_1840711_3 The purine nucleoside phosphorylases catalyze the phosphorolytic breakdown of the N-glycosidic bond in the beta- (deoxy)ribonucleoside molecules, with the formation of the corresponding free purine bases and pentose-1-phosphate K03783 - 2.4.2.1 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005192 368.0
DYD1_k127_1840711_4 Tyrosine recombinase XerD K03733,K04763 - - 0.000000000000000000000000000000000000000004725 166.0
DYD1_k127_1840711_5 Electron transport protein SCO1 SenC K07152 - - 0.0000000000000000000000000000000000001729 148.0
DYD1_k127_1840711_6 acetyltransferase K06889,K19273 - - 0.0000000000000000000000000000000000003916 147.0
DYD1_k127_1840711_7 YtkA-like - - - 0.00000000000002883 79.0
DYD1_k127_1840711_8 - - - - 0.00000000001565 72.0
DYD1_k127_1840711_9 Parallel beta-helix repeats - - - 0.0002875 51.0
DYD1_k127_1856320_0 denitrification pathway - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000009284 286.0
DYD1_k127_1856320_1 denitrification pathway - - - 0.00000000000000000000000000000000000000000000000000000000000000000000208 255.0
DYD1_k127_1856320_2 PFAM Polysulphide reductase, NrfD K00185 - - 0.0000000000000000000000000000000000000000006267 169.0
DYD1_k127_1856320_3 formate dehydrogenase - - - 0.0000000000000000000000000000000000000001418 168.0
DYD1_k127_1876334_0 PFAM glycosyl transferase group 1 K15521 - 2.4.1.250 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006997 497.0
DYD1_k127_1876334_1 TIGRFAM cell envelope-related function transcriptional attenuator, LytR CpsA family - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001448 349.0
DYD1_k127_1876334_2 PFAM Pyridine nucleotide-disulphide oxidoreductase K17218 - 1.8.5.4 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008703 327.0
DYD1_k127_1876334_3 DeoC/LacD family aldolase K01635 - 4.1.2.40 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000001634 295.0
DYD1_k127_1876334_4 Cytidine monophosphokinase K00876 GO:0003674,GO:0003824,GO:0004849,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006139,GO:0006206,GO:0006213,GO:0006220,GO:0006221,GO:0006222,GO:0006725,GO:0006753,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0008655,GO:0009058,GO:0009112,GO:0009116,GO:0009117,GO:0009119,GO:0009123,GO:0009124,GO:0009129,GO:0009130,GO:0009156,GO:0009161,GO:0009163,GO:0009165,GO:0009173,GO:0009174,GO:0009218,GO:0009220,GO:0009224,GO:0009259,GO:0009260,GO:0009987,GO:0016301,GO:0016310,GO:0016740,GO:0016772,GO:0016773,GO:0018130,GO:0019205,GO:0019206,GO:0019438,GO:0019637,GO:0019693,GO:0034404,GO:0034641,GO:0034654,GO:0042455,GO:0043094,GO:0043097,GO:0043174,GO:0043771,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0044283,GO:0044424,GO:0044444,GO:0044464,GO:0046035,GO:0046049,GO:0046131,GO:0046132,GO:0046134,GO:0046390,GO:0046483,GO:0055086,GO:0071704,GO:0072527,GO:0072528,GO:0090407,GO:1901135,GO:1901137,GO:1901293,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576,GO:1901657,GO:1901659 2.7.1.48 0.0000000000000000000000000000000000000000000000000000000000000000000000000000002658 269.0
DYD1_k127_1876334_5 Methyltransferase domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000003368 244.0
DYD1_k127_1876334_6 PPIases accelerate the folding of proteins. It catalyzes the cis-trans isomerization of proline imidic peptide bonds in oligopeptides K03768 - 5.2.1.8 0.0000000000000000000000000000000000000000000000000000000000000002822 224.0
DYD1_k127_1876334_7 PFAM SNARE associated Golgi protein - - - 0.00000000000000000000000000000000000000000000000001778 200.0
DYD1_k127_1903574_0 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001229 347.0
DYD1_k127_1903574_1 AAA domain (dynein-related subfamily) - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002305 335.0
DYD1_k127_1903574_2 Membrane-associated phospholipid phosphatase K19302 - 3.6.1.27 0.00000000000000000000000000000000000000000000000000000000000000003834 235.0
DYD1_k127_1903574_3 Alpha/beta hydrolase family K03928 - 3.1.1.1 0.000000000000000000000000000000000000000000007896 176.0
DYD1_k127_1903574_4 Involved in the cellular defense against the biological effects of O6-methylguanine (O6-MeG) and O4-methylthymine (O4-MeT) in DNA. Repairs the methylated nucleobase in DNA by stoichiometrically transferring the methyl group to a cysteine residue in the enzyme. This is a suicide reaction the enzyme is irreversibly inactivated K00567 - 2.1.1.63 0.00000000000000000000000000000000000411 153.0
DYD1_k127_1903574_5 DNA-templated transcription, initiation K03088 - - 0.0000000000000000000000000001473 123.0
DYD1_k127_1903574_6 COG0491 Zn-dependent hydrolases, including glyoxylases - - - 0.0000000000000000000000001564 115.0
DYD1_k127_1903574_7 Belongs to the class-II aminoacyl-tRNA synthetase family. Phe-tRNA synthetase alpha subunit type 1 subfamily K01889 - 6.1.1.20 0.00000000000000005256 84.0
DYD1_k127_1903574_8 Catalyzes the transfer of an acyl group from acyl- phosphate (acyl-PO(4)) to glycerol-3-phosphate (G3P) to form lysophosphatidic acid (LPA). This enzyme utilizes acyl-phosphate as fatty acyl donor, but not acyl-CoA or acyl-ACP K08591 - 2.3.1.15 0.0005553 49.0
DYD1_k127_1920785_0 ATPases associated with a variety of cellular activities K01990 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002817 326.0
DYD1_k127_1920785_1 PFAM Prenyltransferase squalene oxidase - - - 0.0000000000000000000000000000000000000000000000000000000000000000001217 234.0
DYD1_k127_1920785_10 Cyclophilin-like K09143 - - 0.000000000000000000000000000000000117 139.0
DYD1_k127_1920785_11 Pfam:Pyridox_oxidase - - - 0.000000000000000000000000000000002324 135.0
DYD1_k127_1920785_12 Putative auto-transporter adhesin, head GIN domain - - - 0.00000000000000000000000000449 120.0
DYD1_k127_1920785_13 Protein of unknown function (DUF1706) - - - 0.0000000000000000000000006227 111.0
DYD1_k127_1920785_14 Acetyltransferase (GNAT) family - - - 0.0000000000000000000000009131 113.0
DYD1_k127_1920785_15 glyoxalase III activity - - - 0.0006363 46.0
DYD1_k127_1920785_2 ABC-2 family transporter protein K01992 - - 0.000000000000000000000000000000000000000000000000000000000000000000511 238.0
DYD1_k127_1920785_3 Channel that opens in response to stretch forces in the membrane lipid bilayer. May participate in the regulation of osmotic pressure changes within the cell K03282 GO:0003674,GO:0005215,GO:0005216,GO:0005488,GO:0005515,GO:0005575,GO:0005623,GO:0005886,GO:0005887,GO:0006810,GO:0006811,GO:0006884,GO:0008150,GO:0008361,GO:0008381,GO:0009987,GO:0009992,GO:0015075,GO:0015267,GO:0015318,GO:0016020,GO:0016021,GO:0016043,GO:0019725,GO:0022803,GO:0022836,GO:0022838,GO:0022857,GO:0030104,GO:0031224,GO:0031226,GO:0032535,GO:0034220,GO:0042592,GO:0042802,GO:0044425,GO:0044459,GO:0044464,GO:0048878,GO:0051179,GO:0051234,GO:0055082,GO:0055085,GO:0065007,GO:0065008,GO:0071840,GO:0071944,GO:0090066 - 0.0000000000000000000000000000000000000000000000000000000000003815 214.0
DYD1_k127_1920785_4 Belongs to the MsrB Met sulfoxide reductase family K07305 - 1.8.4.12 0.000000000000000000000000000000000000000000000000000000000003603 211.0
DYD1_k127_1920785_5 Belongs to the arginase family K01476 - 3.5.3.1 0.0000000000000000000000000000000000000000000000000002778 194.0
DYD1_k127_1920785_7 Cation efflux family - - - 0.000000000000000000000000000000000000000000002536 174.0
DYD1_k127_1920785_8 mRNA catabolic process K06950 - - 0.00000000000000000000000000000000000000000002195 166.0
DYD1_k127_1920785_9 Thioesterase-like superfamily K07107 - - 0.000000000000000000000000000000000005498 149.0
DYD1_k127_1951466_0 Serine threonine protein kinase K12132 - 2.7.11.1 4.415e-207 659.0
DYD1_k127_1951466_1 PFAM NAD-dependent epimerase dehydratase K01710,K08678 - 4.1.1.35,4.2.1.46 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008157 471.0
DYD1_k127_1951466_2 SMART AAA ATPase K03405 - 6.6.1.1 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002355 453.0
DYD1_k127_1951466_3 pathogenesis K21471,K21687 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004413 455.0
DYD1_k127_1951466_4 Involved in the biosynthesis of isoprenoids. Catalyzes the 1,3-allylic rearrangement of the homoallylic substrate isopentenyl (IPP) to its allylic isomer, dimethylallyl diphosphate (DMAPP) K01823 - 5.3.3.2 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001319 420.0
DYD1_k127_1951466_5 Belongs to the FPP GGPP synthase family K13787 - 2.5.1.1,2.5.1.10,2.5.1.29 0.000000000000000000000000000000000000000000000000000000000000000000001044 248.0
DYD1_k127_1951466_6 GtrA-like protein - - - 0.000000000000000000000000000000001387 142.0
DYD1_k127_1951466_7 Carrier of the growing fatty acid chain in fatty acid biosynthesis K02078 GO:0000035,GO:0000036,GO:0003674,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005975,GO:0006082,GO:0006629,GO:0006631,GO:0006633,GO:0006643,GO:0006644,GO:0006664,GO:0006793,GO:0006796,GO:0008150,GO:0008152,GO:0008610,GO:0008654,GO:0009058,GO:0009245,GO:0009247,GO:0009311,GO:0009312,GO:0009987,GO:0016051,GO:0016053,GO:0019637,GO:0019752,GO:0019842,GO:0031177,GO:0032787,GO:0033218,GO:0036094,GO:0043167,GO:0043168,GO:0043436,GO:0044237,GO:0044238,GO:0044249,GO:0044255,GO:0044281,GO:0044283,GO:0044424,GO:0044444,GO:0044464,GO:0044620,GO:0046394,GO:0046467,GO:0046493,GO:0048037,GO:0051192,GO:0071704,GO:0072330,GO:0072341,GO:0090407,GO:0140104,GO:1901135,GO:1901137,GO:1901269,GO:1901271,GO:1901576,GO:1903509 - 0.000000000000000000001093 98.0
DYD1_k127_1954467_0 Domain of unknown function(DUF2779) - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004771 455.0
DYD1_k127_1954467_1 - - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000002469 272.0
DYD1_k127_1954467_2 Belongs to the pirin family K06911 - - 0.000000000000000000000000000000000000000000000000000004996 202.0
DYD1_k127_1954467_3 DNA-templated transcription, initiation K03088 - - 0.0000000000000000000000000000000000000000000000002047 182.0
DYD1_k127_1954467_4 periplasmic ligand-binding sensor domain - - - 0.000000000000000000000000000000000000000000048 179.0
DYD1_k127_1954467_6 aldo keto reductase - - - 0.0000000000000001978 81.0
DYD1_k127_1954467_7 Tfp pilus assembly protein FimV - - - 0.00001335 57.0
DYD1_k127_1954467_8 Helix-turn-helix domain - - - 0.00001474 53.0
DYD1_k127_1970708_0 ABC transporter (Permease) K02042 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009849 464.0
DYD1_k127_1970708_1 Part of the ABC transporter complex PhnCDE involved in phosphonates import. Responsible for energy coupling to the transport system K02041 - 3.6.3.28 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003995 353.0
DYD1_k127_1970708_10 Required for dimerization of active 70S ribosomes into 100S ribosomes in stationary phase K05808 - - 0.000000000000000000000000000000000000000000000000000005378 198.0
DYD1_k127_1970708_11 GTP binding - - - 0.00000000000000000000000000000000000000006395 166.0
DYD1_k127_1970708_12 competence protein - - - 0.000000000000000000000000000000000000001142 156.0
DYD1_k127_1970708_13 organic phosphonate transport K02044 - - 0.00000000000001466 76.0
DYD1_k127_1970708_2 PFAM type II secretion system protein K12511 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005863 326.0
DYD1_k127_1970708_3 PFAM type II secretion system protein K12510 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005347 309.0
DYD1_k127_1970708_4 ATPases associated with a variety of cellular activities K16786,K16787 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000001101 261.0
DYD1_k127_1970708_5 ATPase activity K16786,K16787 - - 0.000000000000000000000000000000000000000000000000000000000000000000000009242 262.0
DYD1_k127_1970708_6 HNH endonuclease - - - 0.00000000000000000000000000000000000000000000000000000000000000001491 229.0
DYD1_k127_1970708_7 PFAM type II secretion system protein E K02283 - - 0.00000000000000000000000000000000000000000000000000000000000004826 215.0
DYD1_k127_1970708_8 Cobalt transport protein K02008,K16785 - - 0.00000000000000000000000000000000000000000000000000000000000189 218.0
DYD1_k127_1970708_9 phosphorelay sensor kinase activity K16923,K18967 - 2.7.7.65 0.000000000000000000000000000000000000000000000000000000000004842 218.0
DYD1_k127_1994998_0 TIGRFAM molybdenum cofactor synthesis K03750,K07219 - 2.10.1.1 1.785e-196 641.0
DYD1_k127_1994998_1 MoeA domain protein domain I and II K03750 - 2.10.1.1 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002626 451.0
DYD1_k127_1994998_10 Catalyzes the prenylation of para-hydroxybenzoate (PHB) with an all-trans polyprenyl group. Mediates the second step in the final reaction sequence of ubiquinone-8 (UQ-8) biosynthesis, which is the condensation of the polyisoprenoid side chain with PHB, generating the first membrane-bound Q intermediate 3- octaprenyl-4-hydroxybenzoate K02548,K03179,K17105 - 2.5.1.39,2.5.1.42,2.5.1.74 0.000000000000000000000000000000000000005979 158.0
DYD1_k127_1994998_11 - - - - 0.000001497 62.0
DYD1_k127_1994998_12 dTDP-4-dehydrorhamnose 3,5-epimerase K01790 - 5.1.3.13 0.0000107 56.0
DYD1_k127_1994998_13 DinB superfamily - - - 0.0001179 51.0
DYD1_k127_1994998_2 metallopeptidase activity - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009413 344.0
DYD1_k127_1994998_3 Glycosyltransferase like family 2 K00721 - 2.4.1.83 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007322 307.0
DYD1_k127_1994998_4 PPIases accelerate the folding of proteins. It catalyzes the cis-trans isomerization of proline imidic peptide bonds in oligopeptides K01802 - 5.2.1.8 0.0000000000000000000000000000000000000000000000000000000000000000000004404 255.0
DYD1_k127_1994998_5 Specifically dimethylates two adjacent adenosines (A1518 and A1519) in the loop of a conserved hairpin near the 3'-end of 16S rRNA in the 30S particle. May play a critical role in biogenesis of 30S subunits K02528 - 2.1.1.182 0.00000000000000000000000000000000000000000000000000000000000000000001017 243.0
DYD1_k127_1994998_6 Proline dehydrogenase K00318 - - 0.0000000000000000000000000000000000000000000000000000000000000001626 226.0
DYD1_k127_1994998_7 SNARE associated Golgi protein - - - 0.0000000000000000000000000000000000000000000000000000000006948 209.0
DYD1_k127_1994998_8 PFAM Roadblock LC7 family protein K07131 - - 0.000000000000000000000000000000000000000000000000436 178.0
DYD1_k127_1994998_9 Enoyl-(Acyl carrier protein) reductase K03793 - 1.5.1.33 0.000000000000000000000000000000000000000000007853 179.0
DYD1_k127_2062369_0 Catalyzes the formation of S-adenosylmethionine (AdoMet) from methionine and ATP. The overall synthetic reaction is composed of two sequential steps, AdoMet formation and the subsequent tripolyphosphate hydrolysis which occurs prior to release of AdoMet from the enzyme K00789 GO:0003674,GO:0003824,GO:0004478,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0016740,GO:0016765,GO:0044424,GO:0044444,GO:0044464 2.5.1.6 1.668e-196 619.0
DYD1_k127_2062369_1 Interacts with outer membrane receptor proteins that carry out high-affinity binding and energy dependent uptake into the periplasmic space of specific substrates. It could act to transduce energy from the cytoplasmic membrane to specific energy- requiring processes in the outer membrane, resulting in the release into the periplasm of ligands bound by these outer membrane proteins - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000003277 305.0
DYD1_k127_2062369_2 Peptidase family M23 K08642 - - 0.0000000000000000000000000000000001647 154.0
DYD1_k127_2069988_0 ROK family K00845 - 2.7.1.2 0.000000000000000000000000000000000000000000000000000000000000000000000000000001666 276.0
DYD1_k127_2069988_1 Mediates influx of magnesium ions K03284 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000001067 282.0
DYD1_k127_2069988_2 Class II Aldolase and Adducin N-terminal domain K01628,K03077 GO:0003674,GO:0003824,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005975,GO:0005996,GO:0006793,GO:0006796,GO:0008150,GO:0008152,GO:0008270,GO:0008742,GO:0009056,GO:0009058,GO:0009987,GO:0016052,GO:0016829,GO:0016830,GO:0016832,GO:0016853,GO:0016854,GO:0016857,GO:0019321,GO:0019323,GO:0019324,GO:0019566,GO:0019568,GO:0019569,GO:0019572,GO:0019637,GO:0043167,GO:0043169,GO:0044237,GO:0044238,GO:0044281,GO:0044282,GO:0044424,GO:0044444,GO:0044464,GO:0046365,GO:0046373,GO:0046872,GO:0046914,GO:0051167,GO:0071704,GO:0090407,GO:1901135,GO:1901137,GO:1901159,GO:1901575,GO:1901576 4.1.2.17,5.1.3.4 0.0000000000000000000000000001248 128.0
DYD1_k127_2069988_3 PFAM cytochrome c biogenesis protein, transmembrane region K06196 - - 0.000000000004329 67.0
DYD1_k127_2070560_0 COGs COG1529 Aerobic-type carbon monoxide dehydrogenase large subunit CoxL CutL homologs K12528 - - 0.0 1468.0
DYD1_k127_2070560_1 Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain - - - 0.0 1050.0
DYD1_k127_2070560_10 Branched-chain amino acid transport system / permease component K02057 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008954 514.0
DYD1_k127_2070560_11 Pyridoxal-phosphate dependent enzyme K01733 - 4.2.3.1 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003321 518.0
DYD1_k127_2070560_12 PFAM Glycosyl transferase family 2 K20534 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004543 472.0
DYD1_k127_2070560_13 Aspartyl-tRNA synthetase with relaxed tRNA specificity since it is able to aspartylate not only its cognate tRNA(Asp) but also tRNA(Asn). Reaction proceeds in two steps L-aspartate is first activated by ATP to form Asp-AMP and then transferred to the acceptor end of tRNA(Asp Asn) K01876 - 6.1.1.12 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007737 432.0
DYD1_k127_2070560_14 membrane protein (DUF2207) - GO:0005575,GO:0005623,GO:0005886,GO:0016020,GO:0044464,GO:0071944 - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001758 408.0
DYD1_k127_2070560_15 Branched-chain amino acid transport system / permease component K02057 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008227 352.0
DYD1_k127_2070560_16 ABC transporter substrate-binding protein PnrA-like - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008131 371.0
DYD1_k127_2070560_17 TIGRFAM LPPG domain protein containing protein K11212 - 2.7.8.28 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002201 350.0
DYD1_k127_2070560_18 Belongs to the binding-protein-dependent transport system permease family K02057 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003911 338.0
DYD1_k127_2070560_19 Belongs to the binding-protein-dependent transport system permease family K02057 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001485 312.0
DYD1_k127_2070560_2 aldehyde oxidase and xanthine dehydrogenase, a b hammerhead - - - 7.396e-273 868.0
DYD1_k127_2070560_20 F420-0 Gamma-glutamyl ligase K12234 - 6.3.2.31,6.3.2.34 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000104 299.0
DYD1_k127_2070560_21 XdhC Rossmann domain K07402 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000001218 302.0
DYD1_k127_2070560_22 Selenium-dependent molybdenum hydroxylase system protein, YqeB family K07402 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000005084 265.0
DYD1_k127_2070560_23 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase K07141 - 2.7.7.76 0.00000000000000000000000000000000000000000000000000000000000000000000000009502 266.0
DYD1_k127_2070560_24 ABC transporter substrate-binding protein PnrA-like K07335 - - 0.00000000000000000000000000000000000000000000000000000000000000000000002526 265.0
DYD1_k127_2070560_25 NADP oxidoreductase coenzyme F420-dependent K06988 - 1.5.1.40 0.000000000000000000000000000000000000000000000000000000000000000000008808 240.0
DYD1_k127_2070560_26 Nitroreductase family - - - 0.000000000000000000000000000000000000000000000000008793 189.0
DYD1_k127_2070560_27 Protein conserved in bacteria - - - 0.0000000000000000000000000000000000000000000002853 172.0
DYD1_k127_2070560_28 Guanylyltransferase that catalyzes the activation of 2- phospho-L-lactate (LP) as (2S)-lactyl-2-diphospho-5'-guanosine (LPPG), via the condensation of LP with GTP. Is involved in the biosynthesis of coenzyme F420, a hydride carrier cofactor K14941 GO:0003674,GO:0003824,GO:0006732,GO:0008150,GO:0008152,GO:0009058,GO:0009108,GO:0009987,GO:0016740,GO:0016772,GO:0016779,GO:0043814,GO:0044237,GO:0044249,GO:0051186,GO:0051188,GO:0070568 2.7.7.68 0.000000000000000000000000000000000000002436 162.0
DYD1_k127_2070560_29 Thioesterase superfamily protein - - - 0.000000000000000000000000000000001374 135.0
DYD1_k127_2070560_3 Pyridoxal-phosphate dependent enzyme - - - 6.582e-236 739.0
DYD1_k127_2070560_30 Psort location Cytoplasmic, score - - - 0.000000000000000000000000000008335 125.0
DYD1_k127_2070560_31 flavin-nucleotide-binding protein structurally related to pyridoxine 5'-phosphate oxidase - - - 0.0000000000000000000000002799 109.0
DYD1_k127_2070560_32 protein related to plant photosystem II stability assembly factor - - - 0.00000000000000005335 94.0
DYD1_k127_2070560_33 Dehydrogenase K03519 - 1.2.5.3 0.0000002661 63.0
DYD1_k127_2070560_4 Amidohydrolase family K01464,K01466 - 3.5.2.2,3.5.2.5 5.016e-220 696.0
DYD1_k127_2070560_5 - Catabolite gene activator and regulatory subunit of cAMP-dependent protein - - - 3.373e-194 621.0
DYD1_k127_2070560_6 Amidohydrolase family - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001504 576.0
DYD1_k127_2070560_7 CO dehydrogenase flavoprotein C-terminal domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009714 576.0
DYD1_k127_2070560_8 Luciferase-like monooxygenase K00320 - 1.5.98.2 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003638 564.0
DYD1_k127_2070560_9 ABC transporter K02056 - 3.6.3.17 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001132 547.0
DYD1_k127_2079016_0 Alcohol dehydrogenase GroES-like domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004605 338.0
DYD1_k127_2079016_1 Belongs to the enoyl-CoA hydratase isomerase family K15866 - 5.3.3.18 0.0000000000000000000000000000000000000000000000000000000000000000000000005971 262.0
DYD1_k127_2079016_2 Belongs to the enoyl-CoA hydratase isomerase family K01692,K01715 - 4.2.1.17 0.000000000000000000000000000000000000000000000000000000000000000000021 236.0
DYD1_k127_2079016_3 AsnC family K03719 - - 0.0000000000000000000000000000000000003388 147.0
DYD1_k127_2096904_0 ATPase AAA-2 domain protein K03696 - - 0.0 1036.0
DYD1_k127_2096904_1 His Kinase A (phosphoacceptor) domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006946 591.0
DYD1_k127_2096904_10 von Willebrand factor (vWF) type A domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002874 370.0
DYD1_k127_2096904_11 PFAM peptidase S1 and S6, chymotrypsin Hap K04771 - 3.4.21.107 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005876 361.0
DYD1_k127_2096904_12 Belongs to the cation diffusion facilitator (CDF) transporter (TC 2.A.4) family - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002648 355.0
DYD1_k127_2096904_13 Transporter associated domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000792 382.0
DYD1_k127_2096904_14 Heat shock protein DnaJ domain protein K05516 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000579 346.0
DYD1_k127_2096904_15 PFAM GGDEF domain containing protein - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001375 346.0
DYD1_k127_2096904_16 PhoQ Sensor - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003392 321.0
DYD1_k127_2096904_17 Involved in the import of queuosine (Q) precursors, required for Q precursor salvage K09125 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000002982 273.0
DYD1_k127_2096904_18 RNase_H superfamily K07502 - - 0.00000000000000000000000000000000000000000000000000000000000000000001479 249.0
DYD1_k127_2096904_19 Catalyzes the NADPH-dependent reduction of 7-cyano-7- deazaguanine (preQ0) to 7-aminomethyl-7-deazaguanine (preQ1) K06879,K09457 - 1.7.1.13 0.00000000000000000000000000000000000000000000000006232 198.0
DYD1_k127_2096904_2 it binds specifically double-stranded DNA at a 9 bp consensus (dnaA box) 5'-TTATC CA A CA A-3'. DnaA binds to ATP and to acidic phospholipids K02313 GO:0003674,GO:0003676,GO:0003677,GO:0003688,GO:0003690,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005886,GO:0006139,GO:0006259,GO:0006260,GO:0006261,GO:0006270,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0016020,GO:0034641,GO:0034645,GO:0043170,GO:0043565,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044424,GO:0044464,GO:0046483,GO:0071704,GO:0071944,GO:0090304,GO:0097159,GO:1901360,GO:1901363,GO:1901576,GO:1990837 - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002358 533.0
DYD1_k127_2096904_20 Putative esterase - - - 0.0000000000000000000001249 110.0
DYD1_k127_2096904_21 Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain - - - 0.0000000000000000000002997 101.0
DYD1_k127_2096904_23 DNA segregation ATPase FtsK SpoIIIE and related proteins K03466 GO:0002790,GO:0005575,GO:0005618,GO:0005623,GO:0005886,GO:0005887,GO:0006810,GO:0008104,GO:0008150,GO:0009306,GO:0009405,GO:0009605,GO:0009607,GO:0009987,GO:0015031,GO:0015833,GO:0016020,GO:0016021,GO:0020012,GO:0030312,GO:0030682,GO:0031224,GO:0031226,GO:0032940,GO:0033036,GO:0040007,GO:0042783,GO:0042886,GO:0043207,GO:0044110,GO:0044116,GO:0044117,GO:0044315,GO:0044403,GO:0044413,GO:0044415,GO:0044419,GO:0044425,GO:0044459,GO:0044464,GO:0045184,GO:0046903,GO:0050896,GO:0051179,GO:0051234,GO:0051701,GO:0051704,GO:0051707,GO:0051805,GO:0051807,GO:0051810,GO:0051832,GO:0051834,GO:0052173,GO:0052200,GO:0052564,GO:0052572,GO:0055085,GO:0071702,GO:0071705,GO:0071806,GO:0071944,GO:0075136 - 0.00000002263 65.0
DYD1_k127_2096904_3 introduces a magnesium ion into protoporphyrin IX to yield Mg-protoporphyrin IX K03404,K03405 - 6.6.1.1 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003292 513.0
DYD1_k127_2096904_4 DNA-dependent ATPase involved in processing of recombination intermediates, plays a role in repairing DNA breaks. Stimulates the branch migration of RecA-mediated strand transfer reactions, allowing the 3' invading strand to extend heteroduplex DNA faster. Binds ssDNA in the presence of ADP but not other nucleotides, has ATPase activity that is stimulated by ssDNA and various branched DNA structures, but inhibited by SSB. Does not have RecA's homology-searching function K04485 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001082 492.0
DYD1_k127_2096904_5 Involved in the restart of stalled replication forks. Recognizes and binds the arrested nascent DNA chain at stalled replication forks. It can open the DNA duplex, via its helicase activity, and promote assembly of the primosome and loading of the major replicative helicase DnaB onto DNA K04066 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008821 513.0
DYD1_k127_2096904_6 Major facilitator Superfamily - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001462 443.0
DYD1_k127_2096904_7 drug transmembrane transporter activity - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003691 421.0
DYD1_k127_2096904_8 Serine dehydrogenase proteinase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007641 397.0
DYD1_k127_2096904_9 PFAM RNA binding S1 domain protein K02945 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003726 382.0
DYD1_k127_2116632_0 Catalyzes the attachment of tyrosine to tRNA(Tyr) in a two-step reaction tyrosine is first activated by ATP to form Tyr- AMP and then transferred to the acceptor end of tRNA(Tyr) K01866 - 6.1.1.1 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000808 407.0
DYD1_k127_2116632_1 Transmembrane secretion effector - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002618 342.0
DYD1_k127_2116632_2 Sigma factor PP2C-like phosphatases K07315 - 3.1.3.3 0.00000000000000000000000000000000000000000000053 180.0
DYD1_k127_2116632_3 Helix-turn-helix domain - - - 0.0000000002106 68.0
DYD1_k127_211711_0 PFAM Adenosine AMP deaminase K01488 - 3.5.4.4 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006273 331.0
DYD1_k127_211711_1 Involved in base excision repair of DNA damaged by oxidation or by mutagenic agents. Acts as DNA glycosylase that recognizes and removes damaged bases. Has a preference for oxidized purines, such as 7,8-dihydro-8-oxoguanine (8-oxoG). Has AP (apurinic apyrimidinic) lyase activity and introduces nicks in the DNA strand. Cleaves the DNA backbone by beta-delta elimination to generate a single-strand break at the site of the removed base with both 3'- and 5'-phosphates K10563 - 3.2.2.23,4.2.99.18 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000006932 295.0
DYD1_k127_211711_2 Metallo-beta-lactamase superfamily - - - 0.0000000000000000000000000000000000000000000000000000000000001586 224.0
DYD1_k127_211711_3 Competence protein ComEA K02237 - - 0.0000000000000000000000000000001956 131.0
DYD1_k127_211711_4 PFAM Cobalamin adenosyltransferase K00798 - 2.5.1.17 0.0000000000000000000000000000003075 131.0
DYD1_k127_211711_5 Part of the Sec protein translocase complex. Interacts with the SecYEG preprotein conducting channel. Has a central role in coupling the hydrolysis of ATP to the transfer of proteins into and across the cell membrane, serving as an ATP-driven molecular motor driving the stepwise translocation of polypeptide chains across the membrane K03070 GO:0000166,GO:0003674,GO:0003824,GO:0005215,GO:0005488,GO:0005524,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005886,GO:0005887,GO:0006810,GO:0008104,GO:0008144,GO:0008150,GO:0008320,GO:0008565,GO:0015031,GO:0015399,GO:0015405,GO:0015440,GO:0015450,GO:0015462,GO:0015833,GO:0016020,GO:0016021,GO:0016462,GO:0016787,GO:0016817,GO:0016818,GO:0016887,GO:0017076,GO:0017111,GO:0022804,GO:0022857,GO:0022884,GO:0030554,GO:0031224,GO:0031226,GO:0031522,GO:0032553,GO:0032555,GO:0032559,GO:0032991,GO:0033036,GO:0033220,GO:0035639,GO:0036094,GO:0042623,GO:0042626,GO:0042886,GO:0042887,GO:0043167,GO:0043168,GO:0043492,GO:0043952,GO:0044424,GO:0044425,GO:0044444,GO:0044459,GO:0044464,GO:0045184,GO:0051179,GO:0051234,GO:0055085,GO:0071702,GO:0071705,GO:0071806,GO:0071944,GO:0097159,GO:0097367,GO:1901265,GO:1901363,GO:1904680 - 0.00001736 49.0
DYD1_k127_2131342_0 Catalytic domain of components of various dehydrogenase complexes K00627 - 2.3.1.12 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000134 358.0
DYD1_k127_2131342_1 COG0656 Aldo keto reductases, related to diketogulonate reductase - - - 0.0000000000000000000000000000000000000000000000000001691 196.0
DYD1_k127_2131342_2 Glyoxalase-like domain - - - 0.00000000000000000000000000000000000000009791 161.0
DYD1_k127_2131342_3 X-Pro dipeptidyl-peptidase (S15 family) K06889 - - 0.0000000000000000000000000000000007568 146.0
DYD1_k127_2131342_4 negative regulation of transcription, DNA-templated - - - 0.000000000000000000000000000007551 122.0
DYD1_k127_2131342_5 Domain of unknown function (DUF4203) - - - 0.00000000000000000000000000156 118.0
DYD1_k127_2131342_6 Transcriptional regulatory protein, C terminal K02483 - - 0.000000000000000000002459 103.0
DYD1_k127_2131342_7 Protein of unknown function (DUF1761) - - - 0.000000000000243 78.0
DYD1_k127_2131342_8 efflux transmembrane transporter activity - - - 0.0004025 52.0
DYD1_k127_2143499_0 Osmosensitive K channel histidine kinase K07646 - 2.7.13.3 0.0000000000000000000000000000000000000000000000000000000000000000000000000000001043 284.0
DYD1_k127_2143499_1 TrkA-C domain K03499 GO:0005575,GO:0005623,GO:0005886,GO:0016020,GO:0044464,GO:0071944 - 0.0000000000000000000000000000000000000000000000000000000000000000000000003417 252.0
DYD1_k127_2143499_2 Response regulator receiver K07667 - - 0.0000000000000000000000000000000000000000000000000000000000000000000006993 257.0
DYD1_k127_2143499_3 Amino acid permease - GO:0003333,GO:0003674,GO:0005215,GO:0005342,GO:0005575,GO:0005623,GO:0005886,GO:0005887,GO:0006810,GO:0006811,GO:0006820,GO:0006865,GO:0008150,GO:0008509,GO:0008514,GO:0015075,GO:0015171,GO:0015179,GO:0015291,GO:0015297,GO:0015318,GO:0015711,GO:0015807,GO:0015849,GO:0016020,GO:0016021,GO:0022804,GO:0022857,GO:0031224,GO:0031226,GO:0034220,GO:0044425,GO:0044459,GO:0044464,GO:0046942,GO:0046943,GO:0051179,GO:0051234,GO:0055085,GO:0071702,GO:0071705,GO:0071944,GO:0098656,GO:1902475,GO:1903825,GO:1905039 - 0.0000000000000000000000000000000000000000000000000000000009201 229.0
DYD1_k127_2143499_4 TrkA-N domain K03499 - - 0.00000000000000000000000000000000001534 139.0
DYD1_k127_2143499_5 Belongs to the bacterial solute-binding protein 9 family K02077,K09815,K11707 - - 0.000000000008122 72.0
DYD1_k127_2143499_6 MacB-like periplasmic core domain K02004 - - 0.000002935 51.0
DYD1_k127_2151350_0 phosphorelay sensor kinase activity K01768 - 4.6.1.1 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002132 483.0
DYD1_k127_2151350_1 PFAM peptidase C60, sortase A and B K07284 - 3.4.22.70 0.000000000000000000000000000000000000000000000000000000000000000000000000000000005009 279.0
DYD1_k127_2151350_2 Aminomethyltransferase folate-binding domain K00605 - 2.1.2.10 0.0000000000000000000000000000000000000000000001943 183.0
DYD1_k127_2151350_3 PFAM Low molecular weight phosphotyrosine protein phosphatase K01104 - 3.1.3.48 0.0001562 45.0
DYD1_k127_2157872_0 ATPases associated with a variety of cellular activities K02056 - 3.6.3.17 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004663 507.0
DYD1_k127_2157872_1 S-adenosylhomocysteine deaminase activity K12960 - 3.5.4.28,3.5.4.31 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002991 434.0
DYD1_k127_2157872_2 basic membrane K07335 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001906 366.0
DYD1_k127_2157872_3 transport system permease K02057 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001979 335.0
DYD1_k127_2157872_4 Belongs to the IUNH family K01239 - 3.2.2.1 0.000000000000000000000000000000000000000000000000000000000000000000000000000000005709 280.0
DYD1_k127_2157872_5 helix_turn _helix lactose operon repressor K02529 - - 0.00000000000000000000000000000000000000000000000000000007826 215.0
DYD1_k127_2157872_6 atpase related to the helicase subunit of the holliday junction resolvase - - - 0.0000000000000000000000000000000000000000000002035 174.0
DYD1_k127_2157872_7 pfkB family carbohydrate kinase K00852 - 2.7.1.15 0.00000000000000000000009594 99.0
DYD1_k127_2198041_0 Releases the supercoiling and torsional tension of DNA, which is introduced during the DNA replication and transcription, by transiently cleaving and rejoining one strand of the DNA duplex. Introduces a single-strand break via transesterification at a target site in duplex DNA. The scissile phosphodiester is attacked by the catalytic tyrosine of the enzyme, resulting in the formation of a DNA-(5'-phosphotyrosyl)-enzyme intermediate and the expulsion of a 3'-OH DNA strand. The free DNA strand then undergoes passage around the unbroken strand, thus removing DNA supercoils. Finally, in the religation step, the DNA 3'-OH attacks the covalent intermediate to expel the active-site tyrosine and restore the DNA phosphodiester backbone K03168 - 5.99.1.2 5.163e-249 783.0
DYD1_k127_2198041_1 TIGRFAM DNA protecting protein DprA K04096 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001581 377.0
DYD1_k127_2198041_2 Nucleotidyl transferase K00971 - 2.7.7.13 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000247 306.0
DYD1_k127_2223870_0 Part of a stress-induced multi-chaperone system, it is involved in the recovery of the cell from heat-induced damage, in cooperation with DnaK, DnaJ and GrpE K03695 - - 0.0 1210.0
DYD1_k127_2223870_1 Esterase PHB depolymerase - - - 0.000000000000000000000000000000000000000000001451 180.0
DYD1_k127_2223870_2 serine threonine protein kinase K08884,K12132 GO:0000270,GO:0003674,GO:0003824,GO:0004672,GO:0004674,GO:0005488,GO:0005515,GO:0005575,GO:0005618,GO:0005623,GO:0006022,GO:0006023,GO:0006024,GO:0006464,GO:0006468,GO:0006793,GO:0006796,GO:0006807,GO:0008047,GO:0008150,GO:0008152,GO:0008360,GO:0009058,GO:0009059,GO:0009252,GO:0009273,GO:0009605,GO:0009607,GO:0009889,GO:0009890,GO:0009892,GO:0009987,GO:0010565,GO:0010698,GO:0016301,GO:0016310,GO:0016740,GO:0016772,GO:0016773,GO:0019216,GO:0019217,GO:0019222,GO:0019538,GO:0022603,GO:0022604,GO:0030145,GO:0030203,GO:0030234,GO:0030312,GO:0031323,GO:0031324,GO:0031326,GO:0031327,GO:0032091,GO:0034645,GO:0036211,GO:0040007,GO:0042304,GO:0042546,GO:0042802,GO:0043085,GO:0043086,GO:0043167,GO:0043169,GO:0043170,GO:0043207,GO:0043388,GO:0043393,GO:0043412,GO:0044036,GO:0044038,GO:0044085,GO:0044092,GO:0044093,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044403,GO:0044419,GO:0044464,GO:0045717,GO:0045833,GO:0045922,GO:0046777,GO:0046872,GO:0046890,GO:0046914,GO:0048519,GO:0048523,GO:0050789,GO:0050790,GO:0050793,GO:0050794,GO:0050896,GO:0051055,GO:0051098,GO:0051099,GO:0051100,GO:0051101,GO:0051128,GO:0051701,GO:0051704,GO:0051707,GO:0052173,GO:0052200,GO:0052564,GO:0052572,GO:0062012,GO:0062014,GO:0065007,GO:0065008,GO:0065009,GO:0070589,GO:0071554,GO:0071704,GO:0071840,GO:0071944,GO:0075136,GO:0080090,GO:0098772,GO:0140096,GO:1901135,GO:1901137,GO:1901564,GO:1901566,GO:1901576 2.7.11.1 0.0000000000000000002209 105.0
DYD1_k127_2223870_3 - - - - 0.000000000005938 73.0
DYD1_k127_2223870_4 Zinc finger domain - - - 0.0000001155 66.0
DYD1_k127_2270583_0 Belongs to the UDP-glucose GDP-mannose dehydrogenase family K00012 - 1.1.1.22 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001568 557.0
DYD1_k127_2270583_1 PFAM ABC transporter related K06158 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003643 556.0
DYD1_k127_2270583_2 Peptidase M16 domain protein K07263 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002568 491.0
DYD1_k127_2270583_3 transcriptional regulator, Rrf2 family - - - 0.00000000000000000000000000000000000000005886 156.0
DYD1_k127_2270583_4 Insulinase (Peptidase family M16) K07263 - - 0.000000000000000000000000000000000001135 146.0
DYD1_k127_2345386_0 Predicted permease K07089 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002577 591.0
DYD1_k127_2345386_1 PFAM Bile acid sodium symporter K03325 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001181 551.0
DYD1_k127_2345386_2 PFAM regulatory protein, MerR K22491 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000113 346.0
DYD1_k127_2345386_3 iron dependent repressor K03709 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002426 311.0
DYD1_k127_2345386_4 Low molecular weight phosphatase family K03741 - 1.20.4.1 0.000000000000000000000000000000000000000000004871 168.0
DYD1_k127_2345386_5 Putative Fe-S cluster - - - 0.00000000000000000000000000000000000003757 149.0
DYD1_k127_2345386_6 Thioredoxin domain - - - 0.00000000000000000000004975 105.0
DYD1_k127_2345386_7 PFAM regulatory protein, ArsR K03892 - - 0.000000000000000000007952 100.0
DYD1_k127_2345386_8 - - - - 0.0000000000000001468 83.0
DYD1_k127_2345386_9 TIGRFAM redox-active disulfide protein 2 - - - 0.0000000001283 66.0
DYD1_k127_2356882_1 4-amino-4-deoxy-L-arabinose transferase activity - - - 0.0000000000000000000000000000001471 140.0
DYD1_k127_2356882_2 membrane - - - 0.00000000000000000000000000706 127.0
DYD1_k127_2363676_0 PFAM NHL repeat containing protein - - - 1.643e-311 991.0
DYD1_k127_2363676_1 Succinyl-CoA synthetase functions in the citric acid cycle (TCA), coupling the hydrolysis of succinyl-CoA to the synthesis of either ATP or GTP and thus represents the only step of substrate-level phosphorylation in the TCA. The beta subunit provides nucleotide specificity of the enzyme and binds the substrate succinate, while the binding sites for coenzyme A and phosphate are found in the alpha subunit K01903 - 6.2.1.5 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001834 529.0
DYD1_k127_2363676_10 - - - - 0.000000000000000000000000000000000000006257 153.0
DYD1_k127_2363676_11 GDP-mannose mannosyl hydrolase activity K01515,K03574,K13669,K19710 GO:0000026,GO:0000030,GO:0003674,GO:0003824,GO:0004376,GO:0004377,GO:0006629,GO:0006643,GO:0006664,GO:0008150,GO:0008152,GO:0008610,GO:0009058,GO:0009247,GO:0009987,GO:0016740,GO:0016757,GO:0016758,GO:0043750,GO:0044237,GO:0044238,GO:0044249,GO:0044255,GO:0046467,GO:0070085,GO:0071704,GO:0097502,GO:1901135,GO:1901137,GO:1901576,GO:1903509 2.7.7.53,3.6.1.13,3.6.1.55 0.0000000000000000000000000002815 120.0
DYD1_k127_2363676_12 Catalyzes the reversible formation of acyl-phosphate (acyl-PO(4)) from acyl- acyl-carrier-protein (acyl-ACP). This enzyme utilizes acyl-ACP as fatty acyl donor, but not acyl-CoA K03621 GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0044424,GO:0044464 2.3.1.15 0.000000002413 61.0
DYD1_k127_2363676_13 Nuclease-related domain - - - 0.00000007306 65.0
DYD1_k127_2363676_2 SPFH domain-Band 7 family - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007893 478.0
DYD1_k127_2363676_3 Succinyl-CoA synthetase functions in the citric acid cycle (TCA), coupling the hydrolysis of succinyl-CoA to the synthesis of either ATP or GTP and thus represents the only step of substrate-level phosphorylation in the TCA. The alpha subunit of the enzyme binds the substrates coenzyme A and phosphate, while succinate binding and nucleotide specificity is provided by the beta subunit K01902 - 6.2.1.5 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001389 431.0
DYD1_k127_2363676_4 Catalyzes the condensation reaction of fatty acid synthesis by the addition to an acyl acceptor of two carbons from malonyl-ACP K09458 - 2.3.1.179 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009783 430.0
DYD1_k127_2363676_5 Adenylyl- / guanylyl cyclase, catalytic domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006012 390.0
DYD1_k127_2363676_6 Belongs to the pseudouridine synthase RsuA family K06178 - 5.4.99.22 0.000000000000000000000000000000000000000000000000000000000000000000006106 243.0
DYD1_k127_2363676_7 - - - - 0.0000000000000000000000000000000000000000000000000000002649 205.0
DYD1_k127_2363676_8 Participates in chromosomal partition during cell division. May act via the formation of a condensin-like complex containing Smc and ScpA that pull DNA away from mid-cell into both cell halves K06024 - - 0.00000000000000000000000000000000000000000000000000000131 198.0
DYD1_k127_2363676_9 Methyltransferase K08316 - 2.1.1.171 0.000000000000000000000000000000000000000000000000000009656 199.0
DYD1_k127_2381607_0 Belongs to the cysteine synthase cystathionine beta- synthase family K12339,K21148 GO:0000096,GO:0000097,GO:0003674,GO:0003824,GO:0004124,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006082,GO:0006520,GO:0006534,GO:0006535,GO:0006563,GO:0006790,GO:0006807,GO:0008144,GO:0008150,GO:0008152,GO:0008652,GO:0009058,GO:0009069,GO:0009070,GO:0009987,GO:0016053,GO:0016740,GO:0016765,GO:0016829,GO:0016846,GO:0019344,GO:0019752,GO:0019842,GO:0030170,GO:0032991,GO:0033847,GO:0036094,GO:0043167,GO:0043168,GO:0043436,GO:0044237,GO:0044238,GO:0044249,GO:0044272,GO:0044281,GO:0044283,GO:0044424,GO:0044444,GO:0044464,GO:0046394,GO:0048037,GO:0050662,GO:0070279,GO:0071704,GO:0080146,GO:0097159,GO:1901363,GO:1901564,GO:1901566,GO:1901576,GO:1901605,GO:1901607 2.5.1.113,2.5.1.47 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001506 329.0
DYD1_k127_2381607_1 ErfK ybiS ycfS ynhG family protein - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001259 320.0
DYD1_k127_2381607_2 PFAM ErfK YbiS YcfS YnhG family protein - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000008155 278.0
DYD1_k127_2381607_3 PFAM Thioredoxin domain K05838 - - 0.000000000000000000000000000000000000000000000000000000000000000000000001645 256.0
DYD1_k127_2381607_4 PFAM cell wall hydrolase autolysin K01448 - 3.5.1.28 0.00000000000000000000000000000000000000000000000000002533 199.0
DYD1_k127_2381607_5 - - - - 0.0000000000000000000000000000000000000001701 154.0
DYD1_k127_2381607_6 JAB/MPN domain K21140 - 3.13.1.6 0.0000000000000000000000004557 114.0
DYD1_k127_2381607_7 ThiS family K03636 - - 0.000000000000000000005456 101.0
DYD1_k127_2382057_0 Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000001278 314.0
DYD1_k127_2382057_1 Molybdopterin-binding domain of aldehyde dehydrogenase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000001315 304.0
DYD1_k127_2382057_2 [2Fe-2S] binding domain K03518,K04107 - 1.2.5.3,1.3.7.9 0.0000000000000000000000000000000000000000000001384 177.0
DYD1_k127_2382057_3 CbbQ/NirQ/NorQ C-terminal K09882 - 6.6.1.2 0.000000000000000000000000000000000000000008984 166.0
DYD1_k127_2382057_4 Aerobic-type carbon monoxide dehydrogenase, middle subunit CoxM K03519 - 1.2.5.3 0.00000000000000000000000000000001524 132.0
DYD1_k127_241489_0 Hydantoinase B/oxoprolinase K01474 - 3.5.2.14 7.478e-206 657.0
DYD1_k127_241489_1 Hydantoinase/oxoprolinase N-terminal region K01469,K01473 - 3.5.2.14,3.5.2.9 3.554e-204 671.0
DYD1_k127_241489_2 Subtilase family - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000429 396.0
DYD1_k127_241489_3 proline dipeptidase activity K01271 - 3.4.13.9 0.00000000000000000000000000000000000000000000000000000000000000004452 232.0
DYD1_k127_2438313_0 NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain K00335 - 1.6.5.3 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007806 484.0
DYD1_k127_2438313_1 Formate dehydrogenase alpha subunit K00123,K05299 - 1.17.1.10,1.17.1.9 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001461 389.0
DYD1_k127_2438313_2 formate dehydrogenase (NAD+) activity - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000001956 300.0
DYD1_k127_2438313_3 Required for formate dehydrogenase (FDH) activity. Acts as a sulfur carrier protein that transfers sulfur from IscS to the molybdenum cofactor prior to its insertion into FDH K02379 - - 0.000000000000000000000000000000000000000000000000000000000000001402 228.0
DYD1_k127_2438313_4 TIGRFAM formate dehydrogenase, alpha subunit, archaeal-type K00123 - 1.17.1.9 0.000000000000000000000000000000000000000009141 168.0
DYD1_k127_245741_0 TIGRFAM ATPase, P-type (transporting), HAD superfamily, subfamily IC K01537 - 3.6.3.8 0.0 1110.0
DYD1_k127_245741_1 glycosyl transferase group 1 K13057 - 2.4.1.245 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002063 604.0
DYD1_k127_245741_2 transferase activity, transferring glycosyl groups - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000004349 258.0
DYD1_k127_245741_3 ABC1 family - - - 0.00000000000000000000000000000001249 134.0
DYD1_k127_245741_4 Plays a role in the regulation of phosphate uptake K02039 GO:0003674,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0008150,GO:0009892,GO:0010563,GO:0010966,GO:0019220,GO:0019222,GO:0031323,GO:0031324,GO:0032879,GO:0034762,GO:0034763,GO:0034765,GO:0034766,GO:0042802,GO:0042803,GO:0043269,GO:0043271,GO:0044070,GO:0044424,GO:0044464,GO:0045936,GO:0046983,GO:0048519,GO:0048523,GO:0050789,GO:0050794,GO:0051049,GO:0051051,GO:0051174,GO:0065007,GO:1903792,GO:1903795,GO:1903796,GO:1903959,GO:1903960,GO:2000185,GO:2000186 - 0.0000000000000003253 81.0
DYD1_k127_2463262_0 PFAM type II secretion system protein E K02283 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001412 390.0
DYD1_k127_2463262_1 PFAM response regulator receiver K02282 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008405 389.0
DYD1_k127_2463262_2 histidine kinase, dimerisation and phosphoacceptor region K07777 - 2.7.13.3 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000198 297.0
DYD1_k127_2463262_3 ATP hydrolysis coupled proton transport - - - 0.0000000000000000000000000000000000000000000000000000000000000003833 228.0
DYD1_k127_2463262_4 Two component transcriptional regulator, LuxR family - - - 0.00000000000000000000000000000000000000000000000000000000002229 215.0
DYD1_k127_2463262_5 Flp pilus assembly protein CpaB K02279 - - 0.00000000000000000000000000000000000000000000000000000007673 209.0
DYD1_k127_247143_0 - - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009828 442.0
DYD1_k127_247143_1 two component, sigma54 specific, transcriptional regulator, Fis family K02481,K07713 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000117 349.0
DYD1_k127_247143_3 Histidine kinase - - - 0.0000000000000000000000000000000001313 139.0
DYD1_k127_247143_4 Nacht domain - - - 0.0000000000000000000000000001272 136.0
DYD1_k127_247143_5 - - - - 0.00000000000001051 79.0
DYD1_k127_2485054_0 Catalyzes the first step in hexosamine metabolism, converting fructose-6P into glucosamine-6P using glutamine as a nitrogen source K00820 - 2.6.1.16 9.98e-292 905.0
DYD1_k127_2485054_1 Tetratricopeptide TPR_2 repeat protein - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002342 568.0
DYD1_k127_2485054_2 Uncharacterized membrane protein (DUF2298) - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004206 420.0
DYD1_k127_2485054_3 Belongs to the cytidylate kinase family. Type 1 subfamily K00945 - 2.7.4.25 0.0000000000000000000000000000000000000000000000000000000000000000000005583 265.0
DYD1_k127_2485054_4 membrane - - - 0.00000000000000000000000000000000000001011 156.0
DYD1_k127_2485054_5 membrane - - - 0.00000000000000000000000000002933 128.0
DYD1_k127_2485054_6 PFAM phospholipid glycerol acyltransferase K00655 - 2.3.1.51 0.0000000000000000000000005397 114.0
DYD1_k127_2485054_7 PspC domain - - - 0.0000000000000000000007405 101.0
DYD1_k127_2485054_8 - - - - 0.000000000000000000002322 102.0
DYD1_k127_2485054_9 4-amino-4-deoxy-L-arabinose transferase and related glycosyltransferases of PMT family - - - 0.000000002353 70.0
DYD1_k127_2514344_0 Belongs to the class-I aminoacyl-tRNA synthetase family K01869 - 6.1.1.4 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004698 587.0
DYD1_k127_2514344_1 Citrate transporter - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002037 368.0
DYD1_k127_2514344_2 endoribonuclease L-PSP K09022 - 3.5.99.10 0.00000000000000000000000000000002565 133.0
DYD1_k127_2514344_3 Rdx family K07401 - - 0.000000000000002635 77.0
DYD1_k127_2514344_4 gas vesicle protein - - - 0.00000001974 58.0
DYD1_k127_2514344_5 Universal stress protein family - - - 0.0008163 48.0
DYD1_k127_256431_0 Required for chromosome condensation and partitioning K03529 - - 1.303e-205 679.0
DYD1_k127_256431_1 serine-type peptidase activity - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000001543 279.0
DYD1_k127_256431_2 Protein of unknown function (DUF502) - - - 0.00000000000000000000000000000000000000000000000006866 184.0
DYD1_k127_256431_3 protein conserved in bacteria containing thioredoxin-like domain - - - 0.0000000000000000000000000000000000000000000002521 182.0
DYD1_k127_256431_4 Domain of unknown function (DUF3597) - - - 0.00000000000000000000000000000000000002757 148.0
DYD1_k127_256431_5 Bacterial protein of unknown function (DUF937) - - - 0.0000000000000000000000000000008112 131.0
DYD1_k127_256431_6 Ig-like domain from next to BRCA1 gene - - - 0.0000000000000000000001923 106.0
DYD1_k127_256431_7 Digests double-stranded RNA. Involved in the processing of primary rRNA transcript to yield the immediate precursors to the large and small rRNAs (23S and 16S). Processes some mRNAs, and tRNAs when they are encoded in the rRNA operon. Processes pre- crRNA and tracrRNA of type II CRISPR loci if present in the organism K03685 GO:0003674,GO:0003676,GO:0003723,GO:0003725,GO:0003824,GO:0004518,GO:0004519,GO:0004521,GO:0004525,GO:0004540,GO:0005488,GO:0006139,GO:0006396,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0009987,GO:0010467,GO:0016070,GO:0016787,GO:0016788,GO:0016891,GO:0016893,GO:0032296,GO:0034641,GO:0043170,GO:0044237,GO:0044238,GO:0046483,GO:0071704,GO:0090304,GO:0090305,GO:0090501,GO:0090502,GO:0097159,GO:0140098,GO:1901360,GO:1901363 3.1.26.3 0.00000000000000000001913 95.0
DYD1_k127_256431_8 - - - - 0.000000000001155 78.0
DYD1_k127_2579798_0 PFAM fumarate lyase K01679 - 4.2.1.2 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002814 597.0
DYD1_k127_2579798_1 Destroys radicals which are normally produced within the cells and which are toxic to biological systems K04564 GO:0000302,GO:0000303,GO:0000305,GO:0003674,GO:0003824,GO:0004784,GO:0006801,GO:0006950,GO:0006979,GO:0008150,GO:0008152,GO:0009636,GO:0009987,GO:0010035,GO:0016209,GO:0016491,GO:0016721,GO:0019430,GO:0033554,GO:0034599,GO:0034614,GO:0042221,GO:0044237,GO:0050896,GO:0051716,GO:0055114,GO:0070887,GO:0071450,GO:0071451,GO:0072593,GO:0097237,GO:0098754,GO:0098869,GO:1901700,GO:1901701,GO:1990748 1.15.1.1 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000002061 295.0
DYD1_k127_2579798_2 PFAM 4Fe-4S ferredoxin, iron-sulfur binding domain protein - - - 0.000000000000000000000000000000000000000000000000000001503 194.0
DYD1_k127_2579798_3 aspartic-type endopeptidase activity K02236,K02506,K02654 - 3.4.23.43 0.00000000000000000000000000002413 124.0
DYD1_k127_2579798_5 PFAM TadE family protein - - - 0.000000007211 60.0
DYD1_k127_2594386_0 TIGRFAM oligoendopeptidase, pepF M3 family K08602 - - 3.829e-216 686.0
DYD1_k127_2594386_1 Beta-Casp domain K07576 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004371 546.0
DYD1_k127_2594386_10 - - - - 0.0000000000000000000000000001536 119.0
DYD1_k127_2594386_12 Amidohydrolase family - - - 0.0000000003377 67.0
DYD1_k127_2594386_14 Protein of unknown function (DUF3048) C-terminal domain - - - 0.00002838 53.0
DYD1_k127_2594386_2 Component of the ubiquinol-cytochrome c reductase complex (complex III or cytochrome b-c1 complex), which is a respiratory chain that generates an electrochemical potential coupled to ATP synthesis - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009639 473.0
DYD1_k127_2594386_3 ATPase that binds to both the 70S ribosome and the 50S ribosomal subunit in a nucleotide-independent manner K06942 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005183 317.0
DYD1_k127_2594386_4 Adenosine specific kinase K09129 - - 0.0000000000000000000000000000000000000000000000000000000000000000000002416 241.0
DYD1_k127_2594386_5 Polymer-forming cytoskeletal - - - 0.0000000000000000000000000000000000001512 147.0
DYD1_k127_2594386_6 Rieske [2Fe-2S] domain K02636 - 1.10.9.1 0.000000000000000000000000000000000001477 147.0
DYD1_k127_2594386_7 - - - - 0.000000000000000000000000000000000001712 140.0
DYD1_k127_2594386_9 GYD domain - - - 0.00000000000000000000000000000007288 127.0
DYD1_k127_2637164_0 - - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000004145 262.0
DYD1_k127_2637164_1 helix_turn_helix, Lux Regulon - - - 0.000000000000000000000000000000000000000000000000000000000000000000055 237.0
DYD1_k127_2637164_2 Histidine kinase - - - 0.0000000000000000000000000000000000000000000000000000000000001542 222.0
DYD1_k127_2637164_3 Protein of unknown function (DUF1624) - - - 0.000000000000000000000000000000000000000000000000004557 193.0
DYD1_k127_267301_0 Glycosyl hydrolase family 3 N terminal domain K01207 - 3.2.1.52 2.09e-213 694.0
DYD1_k127_267301_1 SMART AAA ATPase - - - 4.033e-210 661.0
DYD1_k127_267301_10 - - - - 0.0000000000000000000000000000000000000000000000000001216 195.0
DYD1_k127_267301_11 GTPase that associates with the 50S ribosomal subunit and may have a role during protein synthesis or ribosome biogenesis K03665 - - 0.00000000000000000000000000000000000000000000000378 178.0
DYD1_k127_267301_12 Required for rescue of stalled ribosomes mediated by trans-translation. Binds to transfer-messenger RNA (tmRNA), required for stable association of tmRNA with ribosomes. tmRNA and SmpB together mimic tRNA shape, replacing the anticodon stem-loop with SmpB. tmRNA is encoded by the ssrA gene K03664 GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0044424,GO:0044444,GO:0044464 - 0.0000000000000000000000000000000000000000001091 177.0
DYD1_k127_267301_13 Acyl CoA acetate 3-ketoacid CoA K01040 - 2.8.3.12 0.000000000000000000000000000000000000000003748 166.0
DYD1_k127_267301_14 Domain of unknown function (DUF4870) - - - 0.00000000000000000000000000000004863 128.0
DYD1_k127_267301_2 PFAM phosphoesterase, RecJ domain protein K07462 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004711 444.0
DYD1_k127_267301_3 Serine threonine protein kinase K08884 - 2.7.11.1 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004579 401.0
DYD1_k127_267301_4 Phage integrase, N-terminal SAM-like domain K03733 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008806 366.0
DYD1_k127_267301_5 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain K00015,K00018 - 1.1.1.26,1.1.1.29 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002294 341.0
DYD1_k127_267301_6 Glycosyl transferase, family 2 - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006379 329.0
DYD1_k127_267301_7 Attaches a formyl group to the free amino group of methionyl-tRNA(fMet). The formyl group appears to play a dual role in the initiator identity of N-formylmethionyl-tRNA by promoting its recognition by IF2 and preventing the misappropriation of this tRNA by the elongation apparatus K00604 GO:0003674,GO:0003824,GO:0004479,GO:0006139,GO:0006396,GO:0006399,GO:0006400,GO:0006412,GO:0006413,GO:0006464,GO:0006518,GO:0006725,GO:0006807,GO:0008033,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009451,GO:0009987,GO:0010467,GO:0016070,GO:0016740,GO:0016741,GO:0016742,GO:0019538,GO:0019988,GO:0034470,GO:0034641,GO:0034645,GO:0034660,GO:0036211,GO:0043043,GO:0043170,GO:0043412,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0046483,GO:0071704,GO:0071951,GO:0090304,GO:0140098,GO:0140101,GO:1901360,GO:1901564,GO:1901566,GO:1901576 2.1.2.9 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002015 327.0
DYD1_k127_267301_8 HD domain - - - 0.00000000000000000000000000000000000000000000000000000000000001189 229.0
DYD1_k127_267301_9 histone H2A K63-linked ubiquitination - - - 0.00000000000000000000000000000000000000000000000000000000000001799 222.0
DYD1_k127_2681654_0 PFAM regulatory protein, MerR K22491 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008553 355.0
DYD1_k127_2681654_1 - - - - 0.0000000000000000000000000000000000000000000000000000000000000001231 231.0
DYD1_k127_2681654_2 Uncharacterised protein, DegV family COG1307 - - - 0.000000000000000000000000001198 118.0
DYD1_k127_2681654_3 Uncharacterised protein, DegV family COG1307 - - - 0.00000000000000000001015 99.0
DYD1_k127_2699864_0 Dimerisation domain of Zinc Transporter - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005998 419.0
DYD1_k127_2699864_1 adenylyl cyclase class-3 4 guanylyl cyclase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008783 350.0
DYD1_k127_2699864_2 Major Facilitator Superfamily - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000001455 267.0
DYD1_k127_2699864_3 InterPro IPR014922 - - - 0.00000000000000000000000000000000000000000000000000000001761 202.0
DYD1_k127_2699864_4 methyltransferase - - - 0.000000000000000000000000000000000000000000000000000007858 196.0
DYD1_k127_2748957_0 amino acids such as threonine, to avoid such errors, it has a posttransfer editing activity that hydrolyzes mischarged Thr-tRNA(Val) in a tRNA-dependent manner K01873 - 6.1.1.9 8.179e-252 796.0
DYD1_k127_2748957_1 Beta-lactamase enzyme family - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002749 390.0
DYD1_k127_2748957_2 methyltransferase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000002714 264.0
DYD1_k127_2748957_3 methyltransferase - - - 0.0000000000000000000000000000000000000000000000000000000000002764 216.0
DYD1_k127_2748957_4 Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family - - - 0.000000000001691 76.0
DYD1_k127_2780084_0 PFAM short-chain dehydrogenase reductase SDR - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000001349 284.0
DYD1_k127_2780084_1 PFAM Glycosyl transferase family 2 - - - 0.0000000000000000000000000000000000000000000000000000000000000000009374 239.0
DYD1_k127_2780084_2 oligosaccharyl transferase activity - - - 0.00000000000000000000000000000000000000000000000000000000000008703 235.0
DYD1_k127_2780084_3 4-phosphoerythronate dehydrogenase activity K00058 - 1.1.1.399,1.1.1.95 0.00000000000000000000000000000000000000000557 156.0
DYD1_k127_2780084_4 Glycosyl transferase, family 2 - - - 0.000000000000000000000000000000001044 138.0
DYD1_k127_2780084_5 Psort location CytoplasmicMembrane, score - - - 0.00000000000007966 85.0
DYD1_k127_2780084_6 Dolichyl-phosphate-mannose-protein mannosyltransferase - - - 0.0000000006271 72.0
DYD1_k127_2798861_0 peptidase activity K01286 - 3.4.16.4 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008314 499.0
DYD1_k127_2798861_1 Zinc-binding dehydrogenase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004292 356.0
DYD1_k127_2798861_10 GNAT acetyltransferase - - - 0.0000000000000000000000000000000006923 142.0
DYD1_k127_2798861_11 Psort location CytoplasmicMembrane, score 10.00 - - - 0.0000000000000000000000000000001649 139.0
DYD1_k127_2798861_12 Domain of unknown function (DU1801) - - - 0.000000000000000000000004459 107.0
DYD1_k127_2798861_13 Virulence activator alpha C-term - - - 0.000000000000003992 76.0
DYD1_k127_2798861_14 - - - - 0.00000000000004291 76.0
DYD1_k127_2798861_15 SPTR D1C1B9 DinB family protein - - - 0.00000001305 59.0
DYD1_k127_2798861_16 signal peptide peptidase SppA, 36K type K04773 - - 0.00005735 51.0
DYD1_k127_2798861_17 Calcineurin-like phosphoesterase superfamily domain - - - 0.0003627 47.0
DYD1_k127_2798861_2 CAAX protease self-immunity K07052 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001501 350.0
DYD1_k127_2798861_3 Zinc-binding dehydrogenase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001019 344.0
DYD1_k127_2798861_4 Zinc-binding dehydrogenase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007835 331.0
DYD1_k127_2798861_5 Mitochondrial biogenesis AIM24 - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000225 271.0
DYD1_k127_2798861_6 CAAX protease self-immunity - - - 0.0000000000000000000000000000000000000000000000000000000000000001231 231.0
DYD1_k127_2798861_7 PPIases accelerate the folding of proteins. It catalyzes the cis-trans isomerization of proline imidic peptide bonds in oligopeptides K01802 - 5.2.1.8 0.0000000000000000000000000000000000000000000000000000000000000192 221.0
DYD1_k127_2798861_8 metalloendopeptidase activity - - - 0.00000000000000000000000000000000000000000000000000000000001403 229.0
DYD1_k127_2798861_9 - - - - 0.000000000000000000000000000000000000000000002801 174.0
DYD1_k127_2859971_0 PFAM Formylglycine-generating sulfatase enzyme K18912 - 1.14.99.50 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000215 503.0
DYD1_k127_2859971_1 ABC1 family - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004599 415.0
DYD1_k127_2859971_2 Histidine-specific methyltransferase, SAM-dependent - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000001862 311.0
DYD1_k127_2859971_3 - - - - 0.000000000000000000000000000000000000000000000003294 175.0
DYD1_k127_2926723_0 Putative diguanylate phosphodiesterase - - - 1.082e-212 693.0
DYD1_k127_2926723_1 The RuvA-RuvB complex in the presence of ATP renatures cruciform structure in supercoiled DNA with palindromic sequence, indicating that it may promote strand exchange reactions in homologous recombination. RuvAB is a helicase that mediates the Holliday junction migration by localized denaturation and reannealing K03551 - 3.6.4.12 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003808 477.0
DYD1_k127_2926723_2 Catalyzes the phosphorylation of D-fructose 6-phosphate to fructose 1,6-bisphosphate by ATP, the first committing step of glycolysis K21071 - 2.7.1.11,2.7.1.90 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009121 403.0
DYD1_k127_2926723_3 Transfers and isomerizes the ribose moiety from AdoMet to the 7-aminomethyl group of 7-deazaguanine (preQ1-tRNA) to give epoxyqueuosine (oQ-tRNA) K07568 - 2.4.99.17 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007989 373.0
DYD1_k127_2926723_4 amino acids such as threonine, to avoid such errors, it has a posttransfer editing activity that hydrolyzes mischarged Thr-tRNA(Val) in a tRNA-dependent manner K01873 - 6.1.1.9 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001277 313.0
DYD1_k127_2926723_5 Protein of unknown function (DUF2905) - - - 0.00000000000004554 74.0
DYD1_k127_2926723_6 Response regulator containing CheY-like receiver and SARP domains - - - 0.000005019 51.0
DYD1_k127_2932837_0 ATPase P-type (Transporting), HAD superfamily, subfamily IC - - - 0.0 1154.0
DYD1_k127_2932837_1 Heavy metal transport detoxification protein K17686 - 3.6.3.54 3.358e-308 970.0
DYD1_k127_2932837_10 oxidoreductase - - - 0.00000000000000000000000000000000000000000000000002857 198.0
DYD1_k127_2932837_11 PFAM cytochrome c biogenesis protein, transmembrane region - - - 0.00000000000000000000000000000000000001203 154.0
DYD1_k127_2932837_12 cytochrome c biogenesis protein K06196 - - 0.0000000000000000000000000000000001399 143.0
DYD1_k127_2932837_13 subunit of a heme lyase K02200 - - 0.000000000000000000000000000000002876 134.0
DYD1_k127_2932837_14 helix_turn_helix, Arsenical Resistance Operon Repressor - - - 0.0000000000000000000000000000007974 124.0
DYD1_k127_2932837_15 Cytochrome c - - - 0.0000000000000000000000000003411 127.0
DYD1_k127_2932837_16 PFAM blue (type 1) copper domain protein - - - 0.0000000000000000000000005951 112.0
DYD1_k127_2932837_17 nucleic acid phosphodiester bond hydrolysis K07576,K07577 - - 0.000000000000000000009675 93.0
DYD1_k127_2932837_18 PFAM methyltransferase - - - 0.00000000000000000001633 98.0
DYD1_k127_2932837_19 Beta-Casp domain K07576 - - 0.000000000000000002354 89.0
DYD1_k127_2932837_2 Heavy-metal-associated domain K17686 - 3.6.3.54 1.183e-305 950.0
DYD1_k127_2932837_20 Flavin reductase-like protein - - - 0.00000000000000008932 83.0
DYD1_k127_2932837_21 - K00368,K18683 GO:0005575,GO:0005623,GO:0042597,GO:0044464 1.7.2.1 0.00000000000001974 79.0
DYD1_k127_2932837_22 - - - - 0.0000000007917 63.0
DYD1_k127_2932837_24 - - - - 0.00000001414 63.0
DYD1_k127_2932837_25 Purple acid Phosphatase, N-terminal domain - - - 0.000006928 55.0
DYD1_k127_2932837_26 - - - - 0.0000136 50.0
DYD1_k127_2932837_3 PFAM Cytochrome C assembly protein K02198 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001586 556.0
DYD1_k127_2932837_4 glyceraldehyde-3-phosphate dehydrogenase (NAD(P)+) (phosphorylating) activity K00134,K00150,K03340 - 1.2.1.12,1.2.1.59,1.4.1.16 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008237 533.0
DYD1_k127_2932837_5 efflux transmembrane transporter activity K02004 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006064 332.0
DYD1_k127_2932837_6 Cytochrome b/b6/petB K00412 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000004087 268.0
DYD1_k127_2932837_7 efflux transmembrane transporter activity K02004 - - 0.000000000000000000000000000000000000000000000000000000000000000000001503 252.0
DYD1_k127_2932837_8 Belongs to the peptidase M50B family - - - 0.0000000000000000000000000000000000000000000000000000000000000001367 235.0
DYD1_k127_2932837_9 Cupredoxin-like domain - - - 0.000000000000000000000000000000000000000000000000000000008643 200.0
DYD1_k127_2960560_0 Tagatose 6 phosphate kinase K16371 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005731 501.0
DYD1_k127_2960560_1 PUCC protein K08226 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004676 427.0
DYD1_k127_2960560_2 sugar-specific permease SgaT UlaA K03475 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001119 419.0
DYD1_k127_2960560_3 SIS domain K00820 - 2.6.1.16 0.000000000000000000000000000000000000000000000000000000000000000001631 250.0
DYD1_k127_2960560_4 DeoR C terminal sensor domain K02081 - - 0.00000000000000000000000000000000000000000000000000000005644 205.0
DYD1_k127_2960560_5 - - - - 0.000000000000000000000000000000000000000000000002371 182.0
DYD1_k127_2960560_6 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 K02821 - 2.7.1.194 0.00000000000000000000000000000000005974 139.0
DYD1_k127_2960560_7 PFAM phosphotransferase system, lactose cellobiose-specific IIB subunit K02822 - 2.7.1.194 0.000000000000000000000001416 107.0
DYD1_k127_296129_0 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain K09065 - 2.1.3.9 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001332 527.0
DYD1_k127_296129_1 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain K00609 - 2.1.3.2 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008733 423.0
DYD1_k127_296129_2 Amino acid kinase family K00926 - 2.7.2.2 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009021 312.0
DYD1_k127_296129_3 Belongs to the metallo-dependent hydrolases superfamily. Adenine deaminase family K01486 - 3.5.4.2 0.00000000000000000000000000000000000000000000000000000000000000000000001236 246.0
DYD1_k127_296129_4 UTRA K03710 - - 0.000000000000000000000000000000000000000000000000000000004344 209.0
DYD1_k127_2994753_0 transferase activity, transferring glycosyl groups - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006776 425.0
DYD1_k127_2994753_1 PFAM sugar transferase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002256 378.0
DYD1_k127_2994753_10 slime layer polysaccharide biosynthetic process K16710 - - 0.000000000000000000000000000000000000002904 167.0
DYD1_k127_2994753_11 arylsulfatase activity - - - 0.0000000000000000000000000001775 121.0
DYD1_k127_2994753_12 Glycosyl transferase, family 2 - - - 0.000000000000000000000000001035 128.0
DYD1_k127_2994753_13 - - - - 0.000000000000000000000000004048 128.0
DYD1_k127_2994753_14 Glycosyl transferase, family 2 - - - 0.000000000000000000000000005966 122.0
DYD1_k127_2994753_15 Glycosyltransferase like family 2 - - - 0.0000000000000000000005404 107.0
DYD1_k127_2994753_16 Bacterial sugar transferase - - - 0.00000000000000005472 87.0
DYD1_k127_2994753_17 PFAM Glycosyl transferase family 2 - - - 0.0000000000005707 81.0
DYD1_k127_2994753_18 - - - - 0.000000001137 71.0
DYD1_k127_2994753_19 Polymerase - - - 0.00002374 57.0
DYD1_k127_2994753_2 Glycosyltransferase like family 2 - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005345 342.0
DYD1_k127_2994753_20 COG3307 Lipid A core - O-antigen ligase and related enzymes - - - 0.0003787 53.0
DYD1_k127_2994753_3 PFAM polysaccharide biosynthesis protein - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001058 342.0
DYD1_k127_2994753_4 Glycosyl transferase WecB/TagA/CpsF family K05946 - 2.4.1.187 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001818 314.0
DYD1_k127_2994753_5 Glycosyltransferase Family 4 - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000007817 278.0
DYD1_k127_2994753_6 3-beta hydroxysteroid dehydrogenase/isomerase family K22252 - 1.1.1.135 0.0000000000000000000000000000000000000000000000000000000000000000000000000237 260.0
DYD1_k127_2994753_7 Dolichyl-phosphate-mannose-protein mannosyltransferase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000002794 265.0
DYD1_k127_2994753_8 PFAM glycosyl transferase group 1 - - - 0.00000000000000000000000000000000000000000000000000001567 204.0
DYD1_k127_2994753_9 Glycosyl transferases group 1 - - - 0.0000000000000000000000000000000000000001378 166.0
DYD1_k127_3054273_0 Adenylyl- / guanylyl cyclase, catalytic domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008686 517.0
DYD1_k127_3054273_1 PFAM Inositol monophosphatase family K01092 - 3.1.3.25 0.00000000000008456 72.0
DYD1_k127_3065873_0 Prevents misfolding and promotes the refolding and proper assembly of unfolded polypeptides generated under stress conditions K04077 GO:0003674,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006457,GO:0006458,GO:0008150,GO:0009987,GO:0016465,GO:0032991,GO:0044183,GO:0044424,GO:0044444,GO:0044445,GO:0044464,GO:0051082,GO:0061077,GO:0101031,GO:1990220 - 1.456e-264 823.0
DYD1_k127_3065873_1 PFAM amidohydrolase K01468 - 3.5.2.7 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006129 531.0
DYD1_k127_3065873_2 Tetratricopeptide repeat - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002379 318.0
DYD1_k127_3065873_3 peptidyl-tyrosine sulfation - - - 0.0000000000000000000000000000000000000000000000000003039 198.0
DYD1_k127_3065873_4 Major Facilitator Superfamily - - - 0.00000000000000000000000000000000000000000000000006299 193.0
DYD1_k127_3065873_5 Binds to Cpn60 in the presence of Mg-ATP and suppresses the ATPase activity of the latter K04078 - - 0.00000000000000000000000000000000000001881 146.0
DYD1_k127_3065873_6 Nitroreductase family - - - 0.000000000000000000000000000000000001385 145.0
DYD1_k127_3065873_7 integral membrane protein - - - 0.000000000000000000000000000000000002907 145.0
DYD1_k127_3065873_8 tetratricopeptide repeat - - - 0.00000005192 65.0
DYD1_k127_3094558_0 Beta-lactamase superfamily domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000007762 237.0
DYD1_k127_3094558_1 Specifically methylates the N4 position of cytidine in position 1402 (C1402) of 16S rRNA K03438 GO:0000154,GO:0001510,GO:0003674,GO:0003824,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006139,GO:0006364,GO:0006396,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0008168,GO:0008170,GO:0008173,GO:0008649,GO:0008757,GO:0009451,GO:0009987,GO:0010467,GO:0016070,GO:0016072,GO:0016434,GO:0016740,GO:0016741,GO:0022613,GO:0031167,GO:0032259,GO:0034470,GO:0034641,GO:0034660,GO:0042254,GO:0043170,GO:0043412,GO:0043414,GO:0044085,GO:0044237,GO:0044238,GO:0044260,GO:0044424,GO:0044464,GO:0046483,GO:0070475,GO:0071424,GO:0071704,GO:0071840,GO:0090304,GO:0140098,GO:0140102,GO:1901360 2.1.1.199 0.000000000000000000000000000000000000000000000000001707 188.0
DYD1_k127_3094558_2 - - - - 0.000000000000000000000000000000000000000000000006114 182.0
DYD1_k127_3094558_3 Belongs to the MraZ family K03925 - - 0.0000000000000000000000000000000001517 138.0
DYD1_k127_3094558_4 - - - - 0.0000000000000000000000000000001562 128.0
DYD1_k127_3094558_5 Regulatory protein, FmdB family - - - 0.0000000000000000000003138 98.0
DYD1_k127_3094558_6 - - - - 0.00000002444 65.0
DYD1_k127_3209499_0 DNA replication proofreading K02336,K06877 - 2.7.7.7 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005053 508.0
DYD1_k127_3209499_1 acetyltransferase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004516 463.0
DYD1_k127_3209499_10 - - - - 0.000008721 57.0
DYD1_k127_3209499_11 PFAM Sporulation and spore germination - - - 0.0001841 53.0
DYD1_k127_3209499_2 PFAM aldo keto reductase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001203 429.0
DYD1_k127_3209499_3 hydrolase activity, acting on ester bonds K01563 - 3.8.1.5 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006148 327.0
DYD1_k127_3209499_4 Protein tyrosine kinase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008039 317.0
DYD1_k127_3209499_5 Protein tyrosine kinase - - - 0.0000000000000000000000000000000000000000000000000000001775 209.0
DYD1_k127_3209499_6 PFAM phospholipid glycerol acyltransferase K00655 - 2.3.1.51 0.0000000000000000000000000000000000000000005148 179.0
DYD1_k127_3209499_7 - - - - 0.000000000000000000005751 107.0
DYD1_k127_3209499_8 helix_turn_helix, Lux Regulon - - - 0.00000003359 62.0
DYD1_k127_3209499_9 Can catalyze the hydrolysis of ATP in the presence of single-stranded DNA, the ATP-dependent uptake of single-stranded DNA by duplex DNA, and the ATP-dependent hybridization of homologous single-stranded DNAs. It interacts with LexA causing its activation and leading to its autocatalytic cleavage - - - 0.0000001562 61.0
DYD1_k127_3215594_0 TIGRFAM Carbon-monoxide dehydrogenase, catalytic subunit K00198 - 1.2.7.4 5.171e-222 706.0
DYD1_k127_3215594_1 Belongs to the citrate synthase family K01647 - 2.3.3.1 1.024e-202 638.0
DYD1_k127_3215594_2 rRNA (adenine-N6,N6-)-dimethyltransferase activity K00561,K02528 GO:0000154,GO:0000179,GO:0001510,GO:0003674,GO:0003824,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006139,GO:0006364,GO:0006396,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0008168,GO:0008170,GO:0008173,GO:0008649,GO:0008757,GO:0009451,GO:0009987,GO:0010467,GO:0016070,GO:0016072,GO:0016433,GO:0016740,GO:0016741,GO:0022613,GO:0031167,GO:0032259,GO:0034470,GO:0034641,GO:0034660,GO:0042254,GO:0043170,GO:0043412,GO:0043414,GO:0044085,GO:0044237,GO:0044238,GO:0044260,GO:0044424,GO:0044464,GO:0046483,GO:0071704,GO:0071840,GO:0090304,GO:0140098,GO:0140102,GO:1901360 2.1.1.182,2.1.1.184 0.000000000000000000000000000000000000000000000000000000000000000000004294 247.0
DYD1_k127_3215594_3 Lysylphosphatidylglycerol synthase TM region K07027 - - 0.0000000000000000000000000000000000000000000000000000000000004908 231.0
DYD1_k127_3215594_4 Domain of unknown function - - - 0.00000000000000000000000000000000000000000000000000007559 197.0
DYD1_k127_3215594_5 Methyltransferase FkbM domain - - - 0.000000000000000000000000000000000000000000000006479 176.0
DYD1_k127_3215594_6 Belongs to the CDP-alcohol phosphatidyltransferase class-I family K00995 - 2.7.8.5 0.0000000000000000000000000013 129.0
DYD1_k127_3216747_0 Citrate transporter - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001857 603.0
DYD1_k127_3216747_1 PFAM ABC transporter related K01990 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002817 410.0
DYD1_k127_3216747_10 ABC-type transport system involved in lipoprotein release permease component K02004 - - 0.00085 45.0
DYD1_k127_3216747_2 ABC transporter K02006 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003099 306.0
DYD1_k127_3216747_3 Transport permease protein K01992 - - 0.00000000000000000000000000000000000000000000000000000000000000000000001467 259.0
DYD1_k127_3216747_4 Part of the energy-coupling factor (ECF) transporter complex CbiMNOQ involved in cobalt import K02007 - - 0.00000000000000000000000000000000000000000000000000000000000000000000004868 251.0
DYD1_k127_3216747_5 TIGRFAM cobalt ABC transporter, inner membrane subunit CbiQ K02008 - - 0.000000000000000000000000000000000000000000000000929 194.0
DYD1_k127_3216747_6 - - - - 0.000000000000000000000001707 106.0
DYD1_k127_3216747_7 Ferric uptake regulator family K03711 - - 0.000000000000000000000005176 107.0
DYD1_k127_3216747_8 integral membrane protein - - - 0.0000000000000000003045 98.0
DYD1_k127_3216747_9 Acetyltransferase (GNAT) domain - - - 0.000002877 59.0
DYD1_k127_3249322_0 NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient K00333,K13378 - 1.6.5.3 1.979e-287 895.0
DYD1_k127_3249322_1 Glycosyltransferase like family 2 - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001146 522.0
DYD1_k127_3249322_10 Uncharacterized conserved protein (DUF2203) - - - 0.000000000000000000000000005161 114.0
DYD1_k127_3249322_11 PFAM 4Fe-4S ferredoxin, iron-sulfur binding domain protein K00176 - 1.2.7.3 0.000000000000000008487 98.0
DYD1_k127_3249322_12 DeoR-like helix-turn-helix domain - - - 0.000000000000000326 86.0
DYD1_k127_3249322_13 - - - - 0.000002738 50.0
DYD1_k127_3249322_14 - - - - 0.00008031 55.0
DYD1_k127_3249322_2 isochorismatase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003257 495.0
DYD1_k127_3249322_3 Pyruvate:ferredoxin oxidoreductase core domain II K00174 - 1.2.7.11,1.2.7.3 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003063 489.0
DYD1_k127_3249322_4 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain K00175 - 1.2.7.11,1.2.7.3 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003761 375.0
DYD1_k127_3249322_5 NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient K00331 - 1.6.5.3 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002866 322.0
DYD1_k127_3249322_6 PFAM 4Fe-4S ferredoxin, iron-sulfur binding domain protein K00338,K03615 - 1.6.5.3 0.00000000000000000000000000000000000000000000000000000000000000000000000000001048 279.0
DYD1_k127_3249322_7 Pyruvate ferredoxin/flavodoxin oxidoreductase K00172,K00177 - 1.2.7.1,1.2.7.3 0.00000000000000000000000000000000000000000000000000000000000005144 232.0
DYD1_k127_3249322_8 TIGRFAM iron-sulfur cluster assembly accessory protein - - - 0.000000000000000000000000000000000000009939 149.0
DYD1_k127_3249322_9 sh3 domain protein K01448 - 3.5.1.28 0.0000000000000000000000000000005346 130.0
DYD1_k127_3252836_0 3-Oxoacyl- acyl-carrier-protein (ACP) synthase III domain protein K01641 - 2.3.3.10 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003592 524.0
DYD1_k127_3252836_1 Belongs to the HMG-CoA reductase family K00054 - 1.1.1.88 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003227 491.0
DYD1_k127_3252836_10 PFAM NUDIX hydrolase K01515 - 3.6.1.13 0.0000000000000000000000000000000000000000002113 165.0
DYD1_k127_3252836_11 This protein is located at the 30S-50S ribosomal subunit interface and may play a role in the structure and function of the aminoacyl-tRNA binding site K02884 GO:0003674,GO:0003735,GO:0005198,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0015934,GO:0022625,GO:0022626,GO:0032991,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:1990904 - 0.00000000000000000000000000000000002702 137.0
DYD1_k127_3252836_12 family 18 K06306 - - 0.00000000000003227 80.0
DYD1_k127_3252836_13 helix_turn_helix, Lux Regulon - - - 0.0000000003037 66.0
DYD1_k127_3252836_2 Catalyzes the synthesis of activated sulfate K00958 - 2.7.7.4 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001917 443.0
DYD1_k127_3252836_3 histidine kinase, dimerisation and phosphoacceptor region - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002204 418.0
DYD1_k127_3252836_4 Belongs to the thiolase family K00626 - 2.3.1.9 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006579 382.0
DYD1_k127_3252836_5 diguanylate cyclase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000001737 286.0
DYD1_k127_3252836_6 Protein of unknown function (DUF1326) - - - 0.000000000000000000000000000000000000000000000000000000000000000000000003726 249.0
DYD1_k127_3252836_7 Provides the (R)-glutamate required for cell wall biosynthesis K01776 - 5.1.1.3 0.0000000000000000000000000000000000000000000000000000000000000000000009744 241.0
DYD1_k127_3252836_8 NmrA-like family K00329,K00356 - 1.6.5.3,1.6.99.3 0.0000000000000000000000000000000000000000000000000000000000000007966 230.0
DYD1_k127_3252836_9 DUF35 OB-fold domain, acyl-CoA-associated K07068 - - 0.000000000000000000000000000000000000000000000000000000002081 203.0
DYD1_k127_3254356_0 Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family K01845 - 5.4.3.8 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001702 562.0
DYD1_k127_3254356_1 Catalyzes the decarboxylation of four acetate groups of uroporphyrinogen-III to yield coproporphyrinogen-III K01599 - 4.1.1.37 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008839 438.0
DYD1_k127_3254356_2 Catalyzes the 6-electron oxidation of protoporphyrinogen-IX to form protoporphyrin-IX K00231 - 1.3.3.15,1.3.3.4 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001457 374.0
DYD1_k127_3254356_3 Catalyzes the ferrous insertion into protoporphyrin IX K01772 - 4.99.1.1,4.99.1.9 0.0000000000000000000000000000000000000000000000000000000000000000000000000000002269 292.0
DYD1_k127_3254356_4 peroxidase activity K09162 GO:0003674,GO:0003824,GO:0005575,GO:0005623,GO:0008150,GO:0008152,GO:0016491,GO:0016701,GO:0016702,GO:0042597,GO:0044464,GO:0050587,GO:0051213,GO:0055114 1.13.11.49 0.000000000000000000000000000000000000000000000000000000000009861 215.0
DYD1_k127_3258659_0 PFAM Cytochrome C assembly protein K02198 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003852 536.0
DYD1_k127_3258659_1 COG0437 Fe-S-cluster-containing hydrogenase components 1 K00184 - - 0.0000000000000000000000000000000000000000000000000000002571 203.0
DYD1_k127_3258659_2 Polysulphide reductase, NrfD - - - 0.00000000000000000000000000000000000000000000000005913 190.0
DYD1_k127_3258659_3 Heme chaperone required for the biogenesis of c-type cytochromes. Transiently binds heme delivered by CcmC and transfers the heme to apo-cytochromes in a process facilitated by CcmF and CcmH K02197 - - 0.0000000000000000000000000000000000000000000000002318 181.0
DYD1_k127_3258659_4 alkyl hydroperoxide reductase Thiol specific antioxidant Mal allergen K02199 - - 0.00000000000000000000000000000000000001158 151.0
DYD1_k127_3258659_5 subunit of a heme lyase K02200 - - 0.000000000000000000000000000000000001026 147.0
DYD1_k127_3258659_6 Catalyzes the reduction of nitrite to ammonia, consuming six electrons in the process K03385 - 1.7.2.2 0.0000000000000281 84.0
DYD1_k127_3258659_7 - - - - 0.00007561 54.0
DYD1_k127_3275847_0 One of the essential components for the initiation of protein synthesis. Protects formylmethionyl-tRNA from spontaneous hydrolysis and promotes its binding to the 30S ribosomal subunits. Also involved in the hydrolysis of GTP during the formation of the 70S ribosomal complex K02519 - - 2.058e-240 758.0
DYD1_k127_3275847_1 to Modification methylase in Methanococcus jannaschii (Q58392) and Methanobacterium thermoformicicum (P29568) K00571,K00590 - 2.1.1.113,2.1.1.72 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003017 386.0
DYD1_k127_3275847_10 cell envelope-related transcriptional attenuator - - - 0.0000000000000000000000000000000000000000001351 184.0
DYD1_k127_3275847_11 mitochondrial respiratory chain complex IV assembly K14998 GO:0005575,GO:0005618,GO:0005623,GO:0008150,GO:0030312,GO:0040007,GO:0044110,GO:0044116,GO:0044117,GO:0044119,GO:0044403,GO:0044419,GO:0044464,GO:0051704,GO:0071944 - 0.0000000000000000000000000000000000000003905 168.0
DYD1_k127_3275847_12 Protein of unknown function (DUF448) K07742 - - 0.0000000000000000000000000000003169 124.0
DYD1_k127_3275847_13 One of several proteins that assist in the late maturation steps of the functional core of the 30S ribosomal subunit. Associates with free 30S ribosomal subunits (but not with 30S subunits that are part of 70S ribosomes or polysomes). Required for efficient processing of 16S rRNA. May interact with the 5'-terminal helix region of 16S rRNA K02834 - - 0.00000000000000000000000000001301 121.0
DYD1_k127_3275847_14 Belongs to the bacterial ribosomal protein bL32 family K02911 GO:0000027,GO:0000302,GO:0003674,GO:0003735,GO:0005198,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0006412,GO:0006518,GO:0006807,GO:0006950,GO:0006979,GO:0006996,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009314,GO:0009628,GO:0009987,GO:0010467,GO:0015934,GO:0016043,GO:0019538,GO:0022607,GO:0022613,GO:0022618,GO:0022625,GO:0022626,GO:0032991,GO:0034622,GO:0034641,GO:0034645,GO:0042221,GO:0042254,GO:0042255,GO:0042273,GO:0043043,GO:0043170,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043603,GO:0043604,GO:0043933,GO:0044085,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:0050896,GO:0065003,GO:0070925,GO:0071704,GO:0071826,GO:0071840,GO:1901564,GO:1901566,GO:1901576,GO:1901700,GO:1990904 - 0.00000000000000001446 83.0
DYD1_k127_3275847_15 PAS domain - - - 0.000000000002863 79.0
DYD1_k127_3275847_2 Belongs to the 'phage' integrase family K04763 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006706 347.0
DYD1_k127_3275847_3 Responsible for synthesis of pseudouridine from uracil- 55 in the psi GC loop of transfer RNAs K03177 - 5.4.99.25 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002953 325.0
DYD1_k127_3275847_4 PFAM phosphoesterase, RecJ domain protein K06881 - 3.1.13.3,3.1.3.7 0.00000000000000000000000000000000000000000000000000000000000000000000000000000008869 279.0
DYD1_k127_3275847_5 malonyl CoA-acyl carrier protein transacylase K00645 - 2.3.1.39 0.000000000000000000000000000000000000000000000000000000000000000000000000000000671 275.0
DYD1_k127_3275847_6 Belongs to the ribF family K11753 - 2.7.1.26,2.7.7.2 0.000000000000000000000000000000000000000000000000000000000000000000000000003506 265.0
DYD1_k127_3275847_7 An essential GTPase that binds both GDP and GTP, with rapid nucleotide exchange. Plays a role in 16S rRNA processing and 30S ribosomal subunit biogenesis and possibly also in cell cycle regulation and energy metabolism K03595 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000003758 262.0
DYD1_k127_3275847_8 lysyltransferase activity K07027 - - 0.0000000000000000000000000000000000000000000000000000000000000001343 239.0
DYD1_k127_3275847_9 Protein of unknown function DUF47 K07220 - - 0.000000000000000000000000000000000000000000000006685 179.0
DYD1_k127_3286830_0 Peptidase_C39 like family - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000298 362.0
DYD1_k127_3286830_1 - - - - 0.00000000000000000000000000000000000000000000002589 180.0
DYD1_k127_3286830_2 Rubrerythrin K22336 - 1.16.3.1 0.0000000000000000000000000000000000000000000009814 170.0
DYD1_k127_3286830_3 - - - - 0.000000000000000000000000002758 123.0
DYD1_k127_3286830_4 pseudouridine synthase activity K06178,K06181,K06183 - 5.4.99.19,5.4.99.20,5.4.99.22 0.0000000000000000000002819 110.0
DYD1_k127_3314785_0 Glycosyl glycerophosphate transferases involved in teichoic acid biosynthesis TagF TagB EpsJ RodC - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001206 551.0
DYD1_k127_3314785_1 protein methyltransferase activity - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005522 531.0
DYD1_k127_3314785_10 N-acetylglucosaminylinositol deacetylase activity - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000002087 290.0
DYD1_k127_3314785_11 cytidylyl-transferase K00983 - 2.7.7.43 0.000000000000000000000000000000000000000000000000000000000000000000000000000000003759 276.0
DYD1_k127_3314785_12 Glycosyl transferase, family 2 K20444 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000002443 263.0
DYD1_k127_3314785_13 arylsulfatase activity - - - 0.0000000000000000000000000000000000000000000000000000000000002757 231.0
DYD1_k127_3314785_14 4-amino-4-deoxy-L-arabinose transferase activity - - - 0.0000000000000000000000000697 123.0
DYD1_k127_3314785_15 Glycosyl transferase, family 2 - - - 0.00000000001131 66.0
DYD1_k127_3314785_2 3-deoxy-manno-octulosonate-8-phosphatase activity K00983,K03270 - 2.7.7.43,3.1.3.45 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000142 500.0
DYD1_k127_3314785_3 UDP-N-acetylglucosamine 2-epimerase activity - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000462 490.0
DYD1_k127_3314785_4 NeuB family K01654 - 2.5.1.56 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001442 449.0
DYD1_k127_3314785_5 inositol 2-dehydrogenase activity K18431 - 2.7.7.82 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001379 370.0
DYD1_k127_3314785_6 Glycosyl transferase family 2 - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005214 362.0
DYD1_k127_3314785_7 PFAM Methyltransferase type 11 - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004607 344.0
DYD1_k127_3314785_8 4-phosphoerythronate dehydrogenase activity K00058 - 1.1.1.399,1.1.1.95 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007074 328.0
DYD1_k127_3314785_9 Enoyl-(Acyl carrier protein) reductase K00065 - 1.1.1.127 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009737 316.0
DYD1_k127_3318447_0 TIGRFAM cell shape determining protein, MreB Mrl family K03569 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003594 532.0
DYD1_k127_3318447_1 Glutamate synthase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003247 522.0
DYD1_k127_3318447_2 Ligates lysine onto the cytidine present at position 34 of the AUA codon-specific tRNA(Ile) that contains the anticodon CAU, in an ATP-dependent manner. Cytidine is converted to lysidine, thus changing the amino acid specificity of the tRNA from methionine to isoleucine K00760,K04075,K15780 - 2.4.2.8,6.3.4.19 0.0000000000000000000000000000000000000000000000000000000000000000000000000000004747 282.0
DYD1_k127_3318447_3 Nitrite and sulphite reductase 4Fe-4S - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000001854 267.0
DYD1_k127_3318447_4 FeoA K03709 - - 0.0000000000000000000000000000000000000002543 158.0
DYD1_k127_3361421_0 Aldehyde dehydrogenase family K00140 - 1.2.1.18,1.2.1.27 2.504e-196 617.0
DYD1_k127_3361421_1 Oxidoreductase family, C-terminal alpha/beta domain K00010 - 1.1.1.18,1.1.1.369 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005934 421.0
DYD1_k127_3361421_2 Xylose isomerase-like TIM barrel K03335 - 4.2.1.44 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000112 391.0
DYD1_k127_3361421_3 Xylose isomerase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002765 317.0
DYD1_k127_3361421_4 PFAM oxidoreductase domain protein - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000006293 295.0
DYD1_k127_3361421_5 Extracellular solute-binding protein K02012 - - 0.00000000000000000000000000000000000000000000000000000000000001889 230.0
DYD1_k127_3392790_0 gtp cyclohydrolase K01495 GO:0000166,GO:0001882,GO:0001883,GO:0003674,GO:0003824,GO:0003933,GO:0003934,GO:0005488,GO:0005525,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006066,GO:0006725,GO:0006729,GO:0006732,GO:0006807,GO:0008150,GO:0008152,GO:0008270,GO:0009058,GO:0009108,GO:0009987,GO:0016787,GO:0016810,GO:0016814,GO:0017076,GO:0017144,GO:0018130,GO:0019001,GO:0019238,GO:0019438,GO:0019751,GO:0032549,GO:0032550,GO:0032553,GO:0032555,GO:0032561,GO:0034311,GO:0034312,GO:0034641,GO:0035639,GO:0036094,GO:0042558,GO:0042559,GO:0043167,GO:0043168,GO:0043169,GO:0044237,GO:0044249,GO:0044271,GO:0044281,GO:0044283,GO:0044424,GO:0044464,GO:0046146,GO:0046165,GO:0046173,GO:0046483,GO:0046872,GO:0046914,GO:0051186,GO:0051188,GO:0071704,GO:0097159,GO:0097367,GO:1901265,GO:1901360,GO:1901362,GO:1901363,GO:1901564,GO:1901566,GO:1901576,GO:1901615,GO:1901617 3.5.4.16 0.000000000000000000000000000000000000000000000000000000000002343 215.0
DYD1_k127_3392790_1 Haloacid dehalogenase-like hydrolase K19270 - 3.1.3.23 0.0000000000000000000000000000000000000000000000000000000838 203.0
DYD1_k127_3392790_2 F5/8 type C domain - - - 0.00000000000000000000003957 107.0
DYD1_k127_3400143_0 Aminotransferase class I and II K00639 - 2.3.1.29 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001075 597.0
DYD1_k127_3400143_1 PFAM Radical SAM domain protein K04069 - 1.97.1.4 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002116 536.0
DYD1_k127_3400143_2 Glycosyltransferase 28 domain K03715 - 2.4.1.46 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001765 354.0
DYD1_k127_3400143_3 Peptidase M50 - - - 0.000000000000000000000000000000000000000000000000000000001593 207.0
DYD1_k127_3400143_4 Transfers a GMP moiety from GTP to Mo-molybdopterin (Mo- MPT) cofactor (Moco or molybdenum cofactor) to form Mo- molybdopterin guanine dinucleotide (Mo-MGD) cofactor K03752 - 2.7.7.77 0.0000000000000000000000000000000000000000000000006744 181.0
DYD1_k127_3400143_5 cyclic nucleotide binding K10914 - - 0.0000000000000000000000000000004349 130.0
DYD1_k127_3400143_6 iron-sulfur cluster assembly - - - 0.00000000000000000000000000697 113.0
DYD1_k127_3400143_7 Bacterial protein of unknown function (DUF951) - - - 0.00000000000000000002765 93.0
DYD1_k127_3400143_8 - - - - 0.00000000000000246 81.0
DYD1_k127_3469998_0 ABC transporter transmembrane region - - - 8.898e-231 729.0
DYD1_k127_3469998_1 FGGY family of carbohydrate kinases, N-terminal domain K00853 - 2.7.1.16 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004566 472.0
DYD1_k127_3469998_2 Class II Aldolase and Adducin N-terminal domain K03077 - 5.1.3.4 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002652 348.0
DYD1_k127_3469998_3 ABC transporter transmembrane region K06147 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000001294 298.0
DYD1_k127_3469998_4 Dolichyl-phosphate-mannose-protein mannosyltransferase - - - 0.000000000000000000000000000117 134.0
DYD1_k127_3473050_0 adenylyl cyclase class-3 4 guanylyl cyclase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002611 504.0
DYD1_k127_3473050_1 SMART protein phosphatase 2C domain protein K07315 - 3.1.3.3 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001971 405.0
DYD1_k127_3473050_10 Tetratricopeptide repeat - - - 0.0001508 50.0
DYD1_k127_3473050_2 Belongs to the DEAD box helicase family K11927 - 3.6.4.13 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001574 374.0
DYD1_k127_3473050_3 Major facilitator Superfamily - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001114 317.0
DYD1_k127_3473050_4 Protein tyrosine kinase - - - 0.00000000000000000000000000000000000000000000000000000000000000000001409 259.0
DYD1_k127_3473050_5 thiolester hydrolase activity K22250 - 3.1.1.76 0.000000000000000000000000000000000000000000000000000000000000001397 228.0
DYD1_k127_3473050_6 Serine threonine protein kinase - - - 0.0000000000000000000000000000000000000000000000000000005634 213.0
DYD1_k127_3473050_7 'Cold-shock' DNA-binding domain K03704 - - 0.00000000000000000000000005832 108.0
DYD1_k127_3473050_8 von willebrand factor type a K07114 - - 0.000000003574 69.0
DYD1_k127_3473050_9 - - - - 0.0000003109 63.0
DYD1_k127_3481783_0 Sigma-70 region 2 - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000185 538.0
DYD1_k127_3481783_1 Phosphoesterase family K01114 - 3.1.4.3 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001058 455.0
DYD1_k127_3481783_2 PFAM bifunctional deaminase-reductase domain protein - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000001785 295.0
DYD1_k127_3481783_3 Transcriptional regulator - - - 0.000000000000000000000000000000000000000000000000000000000000000000004418 242.0
DYD1_k127_3481783_4 3-demethylubiquinone-9 3-methyltransferase - - - 0.00000000000000000000000000000000000000000000000000000000000000009557 226.0
DYD1_k127_3481783_5 Endoribonuclease L-PSP - - - 0.000000000000000000000000000000000000000000000000000000001196 203.0
DYD1_k127_3481783_6 PFAM YCII-related - - - 0.0000000000000000000002275 102.0
DYD1_k127_3549056_0 Synthesizes selenophosphate from selenide and ATP K01008 - 2.7.9.3 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002545 386.0
DYD1_k127_3549056_1 PFAM PSP1 domain protein - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000001941 304.0
DYD1_k127_3549056_2 TIGRFAM molybdate ABC transporter, inner membrane subunit K02018 - - 0.000000000000000000000000000000000000000000000000000000000000000001297 233.0
DYD1_k127_3549056_3 PFAM periplasmic binding protein - - - 0.00000000000000000000000000000000000000000000000000000000000001033 229.0
DYD1_k127_3549056_4 ABC transporter, periplasmic molybdate-binding protein K02020 - - 0.0000000000000000000000000000000000000000000003673 181.0
DYD1_k127_3549056_5 L-malate dehydrogenase activity K00024 GO:0003674,GO:0003824,GO:0004470,GO:0006082,GO:0006091,GO:0006099,GO:0006101,GO:0008150,GO:0008152,GO:0009060,GO:0009987,GO:0015980,GO:0016491,GO:0016614,GO:0016615,GO:0016616,GO:0016999,GO:0017144,GO:0019752,GO:0030060,GO:0043436,GO:0044237,GO:0044238,GO:0044281,GO:0045333,GO:0055114,GO:0071704,GO:0072350 1.1.1.37 0.00000000000000000000379 96.0
DYD1_k127_355084_0 protein secretion by the type VII secretion system - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000539 302.0
DYD1_k127_355084_1 WD-40 repeat - - - 0.000000000000000000000000000000000000000000000000000000000000000000000005509 276.0
DYD1_k127_355084_2 histidine kinase HAMP region domain protein K07636 - 2.7.13.3 0.0000000000000000000000000000000000000000000000000000164 209.0
DYD1_k127_355084_3 WD40 domain protein beta Propeller K03641 - - 0.000000000000000000000000000000000000000000000004557 186.0
DYD1_k127_355084_4 Transcriptional regulatory protein, C terminal - - - 0.0000000000000000000000000000000000000000000003984 174.0
DYD1_k127_3560458_0 PFAM adenylyl cyclase class-3 4 guanylyl cyclase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007588 532.0
DYD1_k127_3560458_1 FAD dependent oxidoreductase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000394 488.0
DYD1_k127_3560458_2 adenylyl cyclase class-3 4 guanylyl cyclase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007128 522.0
DYD1_k127_3560458_3 DinB superfamily - - - 0.00000000000000000000000000000000000000000000000000006574 191.0
DYD1_k127_3560458_4 Pfam Zn-finger in ubiquitin-hydrolases and other protein K03455 - - 0.0000000000000000000000000000003932 126.0
DYD1_k127_3560458_5 - - - - 0.0000000007375 66.0
DYD1_k127_3571282_0 PFAM fumarate reductase succinate dehydrogenase flavoprotein domain protein K00239 - 1.3.5.1,1.3.5.4 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004182 578.0
DYD1_k127_3571282_1 succinate dehydrogenase, cytochrome K00241 - - 0.00000000000000000000000000002397 128.0
DYD1_k127_3571282_2 Succinate dehydrogenase/Fumarate reductase transmembrane subunit K00242 - - 0.0000000000000000006569 97.0
DYD1_k127_3571282_3 Ceramidase - - - 0.000000001134 65.0
DYD1_k127_3571828_0 L-fucose isomerase, C-terminal domain - - - 1.234e-229 720.0
DYD1_k127_3571828_1 ABC transporter K02056,K10441 - 3.6.3.17 2.821e-196 630.0
DYD1_k127_3571828_10 PFAM sigma-70 region 2 domain protein K03088 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000003894 306.0
DYD1_k127_3571828_11 COGs COG1653 ABC-type sugar transport system periplasmic component K02027 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000001225 301.0
DYD1_k127_3571828_12 PFAM periplasmic binding protein K02058 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000251 282.0
DYD1_k127_3571828_13 N-acetylphosphatidylethanolamine-hydrolysing phospholipas activity - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000008341 271.0
DYD1_k127_3571828_14 Domain of unknown function (DU1801) - - - 0.00000000000000000000000000000000000000000000941 169.0
DYD1_k127_3571828_15 double-stranded DNA 3'-5' exodeoxyribonuclease activity - - - 0.0000000000000000000000000000000007117 147.0
DYD1_k127_3571828_17 hydrolase activity, acting on ester bonds - - - 0.00000000000000000000000000002088 132.0
DYD1_k127_3571828_18 Protein of unknown function (DUF3048) C-terminal domain - - - 0.000000000000000000002147 108.0
DYD1_k127_3571828_2 PFAM type II secretion system protein E K02283 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005018 566.0
DYD1_k127_3571828_3 amino acid - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007648 557.0
DYD1_k127_3571828_4 FGGY family of carbohydrate kinases, N-terminal domain K00853 - 2.7.1.16 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001961 406.0
DYD1_k127_3571828_5 transmembrane transport K02025,K05814,K10118,K10237,K10241,K15771,K17235,K17242,K17316 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004154 392.0
DYD1_k127_3571828_6 glycerophosphodiester transmembrane transport K02026,K05815 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001796 338.0
DYD1_k127_3571828_7 Belongs to the binding-protein-dependent transport system permease family K02057,K10440 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000898 340.0
DYD1_k127_3571828_8 Membrane component of a K02057 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001058 330.0
DYD1_k127_3571828_9 Periplasmic binding protein-like domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001686 313.0
DYD1_k127_3582404_0 PFAM VanW family protein - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000334 554.0
DYD1_k127_3582404_1 Catalyzes the attachment of serine to tRNA(Ser). Is also able to aminoacylate tRNA(Sec) with serine, to form the misacylated tRNA L-seryl-tRNA(Sec), which will be further converted into selenocysteinyl-tRNA(Sec) K01875 GO:0000049,GO:0000166,GO:0000287,GO:0003674,GO:0003676,GO:0003723,GO:0003824,GO:0004812,GO:0004828,GO:0005488,GO:0005515,GO:0005524,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005886,GO:0006082,GO:0006139,GO:0006399,GO:0006412,GO:0006418,GO:0006434,GO:0006518,GO:0006520,GO:0006725,GO:0006807,GO:0008144,GO:0008150,GO:0008152,GO:0008652,GO:0009058,GO:0009059,GO:0009069,GO:0009070,GO:0009987,GO:0010467,GO:0016020,GO:0016053,GO:0016070,GO:0016259,GO:0016260,GO:0016597,GO:0016874,GO:0016875,GO:0017076,GO:0019538,GO:0019752,GO:0030554,GO:0031406,GO:0032553,GO:0032555,GO:0032559,GO:0034641,GO:0034645,GO:0034660,GO:0035639,GO:0036094,GO:0040007,GO:0042802,GO:0042803,GO:0043038,GO:0043039,GO:0043043,GO:0043167,GO:0043168,GO:0043169,GO:0043170,GO:0043177,GO:0043436,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044281,GO:0044283,GO:0044424,GO:0044444,GO:0044464,GO:0046394,GO:0046483,GO:0046872,GO:0046983,GO:0070905,GO:0071704,GO:0071944,GO:0090304,GO:0097159,GO:0097367,GO:0140098,GO:0140101,GO:1901265,GO:1901360,GO:1901363,GO:1901564,GO:1901566,GO:1901576,GO:1901605,GO:1901607 6.1.1.11 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004294 537.0
DYD1_k127_3582404_2 8-amino-7-oxononanoate synthase activity K00639,K00652 GO:0005575,GO:0005618,GO:0005623,GO:0030312,GO:0044464,GO:0071944 2.3.1.29,2.3.1.47 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002313 440.0
DYD1_k127_3582404_3 tetraacyldisaccharide 4'-kinase activity K09791 - - 0.000000000000000000000001506 105.0
DYD1_k127_3582404_4 deoxyhypusine monooxygenase activity - - - 0.00000000000003405 80.0
DYD1_k127_3582404_5 Protein of unknown function (DUF456) K09793 - - 0.0000001118 63.0
DYD1_k127_3641006_0 Catalyzes the reversible formation of acyl-phosphate (acyl-PO(4)) from acyl- acyl-carrier-protein (acyl-ACP). This enzyme utilizes acyl-ACP as fatty acyl donor, but not acyl-CoA K03621 - 2.3.1.15 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006271 394.0
DYD1_k127_3641006_1 Essential cell division protein that forms a contractile ring structure (Z ring) at the future cell division site. The regulation of the ring assembly controls the timing and the location of cell division. One of the functions of the FtsZ ring is to recruit other cell division proteins to the septum to produce a new cell wall between the dividing cells. Binds GTP and shows GTPase activity K03531 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006413 337.0
DYD1_k127_3641006_2 Catalyzes the condensation reaction of fatty acid synthesis by the addition to an acyl acceptor of two carbons from malonyl-ACP K09458 - 2.3.1.179 0.000000000000000000000000000543 123.0
DYD1_k127_3661533_0 PFAM peptidase M20 - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001816 614.0
DYD1_k127_3661533_1 LUD domain K18929 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001145 405.0
DYD1_k127_3661533_2 2-hydroxy-3-oxopropionate reductase K00042 - 1.1.1.60 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002682 339.0
DYD1_k127_3661533_3 Fe-S oxidoreductase K18928 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000001164 256.0
DYD1_k127_3661533_4 Putative cyclase K07130 - 3.5.1.9 0.000000000000000000000000000000000000000000000000000000000000009041 222.0
DYD1_k127_3661533_5 4-hydroxy-2-oxoglutarate aldolase activity K18123 GO:0003674,GO:0003824,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005739,GO:0005759,GO:0006081,GO:0006082,GO:0006090,GO:0006520,GO:0006575,GO:0006807,GO:0008150,GO:0008152,GO:0008700,GO:0009056,GO:0009058,GO:0009063,GO:0009436,GO:0009987,GO:0016053,GO:0016054,GO:0016829,GO:0016830,GO:0016832,GO:0016833,GO:0019470,GO:0019471,GO:0019752,GO:0031974,GO:0032787,GO:0033609,GO:0042219,GO:0042802,GO:0042803,GO:0042866,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0043233,GO:0043436,GO:0043648,GO:0044237,GO:0044238,GO:0044248,GO:0044249,GO:0044281,GO:0044282,GO:0044283,GO:0044422,GO:0044424,GO:0044429,GO:0044444,GO:0044446,GO:0044464,GO:0046185,GO:0046394,GO:0046395,GO:0046487,GO:0046983,GO:0070013,GO:0071704,GO:0072329,GO:0072330,GO:1901564,GO:1901565,GO:1901575,GO:1901576,GO:1901605,GO:1901606 4.1.3.16 0.0000000000000000000000000000000000000000000000000002301 200.0
DYD1_k127_3661592_0 Involved in cell wall formation. Catalyzes the final step in the synthesis of UDP-N-acetylmuramoyl-pentapeptide, the precursor of murein K01929 - 6.3.2.10 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001695 534.0
DYD1_k127_3661592_1 Cell wall formation. Catalyzes the addition of glutamate to the nucleotide precursor UDP-N-acetylmuramoyl-L-alanine (UMA) K01925 - 6.3.2.9 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007089 505.0
DYD1_k127_3661592_2 First step of the lipid cycle reactions in the biosynthesis of the cell wall peptidoglycan K01000 - 2.7.8.13 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007888 430.0
DYD1_k127_3661592_3 Cell wall formation. Catalyzes the transfer of a GlcNAc subunit on undecaprenyl-pyrophosphoryl-MurNAc-pentapeptide (lipid intermediate I) to form undecaprenyl-pyrophosphoryl-MurNAc- (pentapeptide)GlcNAc (lipid intermediate II) K02563 - 2.4.1.227 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003915 385.0
DYD1_k127_3661592_4 Belongs to the SEDS family K03588 - - 0.0000000000000000000000000000000000000000000000000000000000000001003 239.0
DYD1_k127_3661592_5 Belongs to the MurCDEF family K01924 - 6.3.2.8 0.000000000000000000000000000000000000000001011 170.0
DYD1_k127_3679144_0 Branched-chain amino acid transport system / permease component K01998 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001372 352.0
DYD1_k127_3679144_1 MgtE intracellular N domain K06213 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002449 354.0
DYD1_k127_3679144_2 ABC transporter K01996 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000059 325.0
DYD1_k127_3679144_3 PFAM molybdopterin binding domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002522 340.0
DYD1_k127_3679144_4 Branched-chain amino acid ATP-binding cassette transporter K01995 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006128 317.0
DYD1_k127_3679144_5 FAD dependent oxidoreductase K00303 - 1.5.3.1 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004576 318.0
DYD1_k127_3679144_6 Ornithine cyclodeaminase/mu-crystallin family K01750 - 4.3.1.12 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000009047 298.0
DYD1_k127_3679144_7 Bacterial extracellular solute-binding protein K02027 - - 0.000000000000000000000000000000000000000003092 173.0
DYD1_k127_3679144_8 PFAM GGDEF domain containing protein - - - 0.000000000000000000000000000000000000000009204 166.0
DYD1_k127_3728734_0 Bacterial protein of unknown function (DUF853) K06915 - - 3.898e-244 761.0
DYD1_k127_3728734_1 WD-40 repeat - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002099 653.0
DYD1_k127_3728734_10 CoA binding domain K06929 - - 0.0000000000000000000000000000000000008459 150.0
DYD1_k127_3728734_11 PFAM regulatory protein TetR - - - 0.00000000000000000000000000000000000302 145.0
DYD1_k127_3728734_12 - - - - 0.00000000000000000000000000000000004583 140.0
DYD1_k127_3728734_13 Catalyzes the decarboxylation of four acetate groups of uroporphyrinogen-III to yield coproporphyrinogen-III K01599 - 4.1.1.37 0.000000000000000000000000000005988 125.0
DYD1_k127_3728734_14 Dolichyl-phosphate-mannose-protein mannosyltransferase - - - 0.0000000000000000000000003016 123.0
DYD1_k127_3728734_15 - - - - 0.0000000000000000005022 89.0
DYD1_k127_3728734_16 WD40-like Beta Propeller K03641 - - 0.00000000001429 76.0
DYD1_k127_3728734_19 PFAM Cobyrinic acid a,c-diamide synthase - - - 0.00000001642 67.0
DYD1_k127_3728734_2 PFAM Glyoxalase bleomycin resistance protein dioxygenase K07104 - 1.13.11.2 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004991 330.0
DYD1_k127_3728734_3 peptidyl-tyrosine sulfation - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009687 318.0
DYD1_k127_3728734_4 Oxidoreductase molybdopterin binding - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002685 305.0
DYD1_k127_3728734_5 PFAM oxidoreductase FAD NAD(P)-binding domain protein - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000001036 288.0
DYD1_k127_3728734_6 PFAM Glycosyl transferase family 2 K12990 - - 0.0000000000000000000000000000000000000000000000000000000000000000000005076 250.0
DYD1_k127_3728734_7 Polyketide cyclase / dehydrase and lipid transport - - - 0.000000000000000000000000000000000000000000000000000000001517 213.0
DYD1_k127_3728734_8 guanylate cyclase catalytic domain K01768 - 4.6.1.1 0.0000000000000000000000000000000000000000000000000004095 194.0
DYD1_k127_3728734_9 - - - - 0.00000000000000000000000000000000000000000003806 172.0
DYD1_k127_3744019_0 TIGRFAM phosphate ABC transporter, inner membrane subunit PstA K02038 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002408 404.0
DYD1_k127_3744019_1 Part of the ABC transporter complex PstSACB involved in phosphate import. Responsible for energy coupling to the transport system K02036 GO:0003674,GO:0003824,GO:0005215,GO:0006810,GO:0006811,GO:0006817,GO:0006820,GO:0008150,GO:0008509,GO:0015075,GO:0015103,GO:0015114,GO:0015318,GO:0015399,GO:0015405,GO:0015415,GO:0015698,GO:0016462,GO:0016787,GO:0016817,GO:0016818,GO:0016887,GO:0017111,GO:0022804,GO:0022857,GO:0034220,GO:0035435,GO:0042623,GO:0042626,GO:0043225,GO:0043492,GO:0051179,GO:0051234,GO:0055085,GO:0098656,GO:0098660,GO:0098661,GO:0099133 3.6.3.27 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003626 346.0
DYD1_k127_3744019_2 Telomere recombination K07566 - 2.7.7.87 0.0000000000000000000000000000000000000000002624 168.0
DYD1_k127_3744019_3 enterobactin catabolic process K07214 - - 0.00000000000000000000000000000000000000001784 169.0
DYD1_k127_3744019_4 Pathogenicity locus - - - 0.00000000000000000001713 95.0
DYD1_k127_3744019_5 Transcriptional regulator PadR-like family - - - 0.000000001374 68.0
DYD1_k127_3744019_6 Methylates the class 1 translation termination release factors RF1 PrfA and RF2 PrfB on the glutamine residue of the universally conserved GGQ motif K02493 GO:0003674,GO:0003824,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0008150,GO:0008152,GO:0008168,GO:0008757,GO:0016740,GO:0016741,GO:0032259,GO:0044424,GO:0044444,GO:0044464 2.1.1.297 0.00000001764 59.0
DYD1_k127_3744019_7 probably responsible for the translocation of the substrate across the membrane K02037 - - 0.0000004986 53.0
DYD1_k127_3749486_0 ABC transporter, transmembrane region K06147 - - 9.39e-210 666.0
DYD1_k127_3749486_1 PFAM ABC transporter transmembrane region - - - 2.138e-202 672.0
DYD1_k127_3749486_2 sodium-dependent phosphate transmembrane transporter activity K03324,K03466 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000003682 262.0
DYD1_k127_3749486_3 TIGRFAM cell envelope-related function transcriptional attenuator, LytR CpsA family - - - 0.00000000000000000000000000000000000000000000000000000003822 210.0
DYD1_k127_3749486_4 AMP binding - - - 0.00000000459 67.0
DYD1_k127_3749486_5 Catalyzes the prenylation of para-hydroxybenzoate (PHB) with an all-trans polyprenyl group. Mediates the second step in the final reaction sequence of ubiquinone-8 (UQ-8) biosynthesis, which is the condensation of the polyisoprenoid side chain with PHB, generating the first membrane-bound Q intermediate 3- octaprenyl-4-hydroxybenzoate K03179 - 2.5.1.39 0.0008169 49.0
DYD1_k127_3824540_0 Belongs to the Glu Leu Phe Val dehydrogenases family K00261,K00262 - 1.4.1.3,1.4.1.4 1.293e-204 644.0
DYD1_k127_3824540_1 Alanine dehydrogenase/PNT, N-terminal domain K00259 - 1.4.1.1 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000531 485.0
DYD1_k127_3824540_2 Allows the formation of correctly charged Asn-tRNA(Asn) or Gln-tRNA(Gln) through the transamidation of misacylated Asp- tRNA(Asn) or Glu-tRNA(Gln) in organisms which lack either or both of asparaginyl-tRNA or glutaminyl-tRNA synthetases. The reaction takes place in the presence of glutamine and ATP through an activated phospho-Asp-tRNA(Asn) or phospho-Glu-tRNA(Gln) K01876,K02434 GO:0003674,GO:0003824,GO:0006082,GO:0006139,GO:0006399,GO:0006520,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0009987,GO:0016070,GO:0016874,GO:0016879,GO:0016884,GO:0019752,GO:0034641,GO:0034660,GO:0043038,GO:0043039,GO:0043170,GO:0043436,GO:0044237,GO:0044238,GO:0044281,GO:0046483,GO:0050567,GO:0070681,GO:0071704,GO:0090304,GO:0140098,GO:0140101,GO:1901360,GO:1901564 6.1.1.12,6.3.5.6,6.3.5.7 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001195 497.0
DYD1_k127_3824540_3 COG1506 Dipeptidyl aminopeptidases acylaminoacyl-peptidases - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001509 437.0
DYD1_k127_3824540_4 PFAM Nucleotidyl transferase K00973 - 2.7.7.24 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005154 349.0
DYD1_k127_3824540_5 PFAM Aminotransferase class I and II K05825 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001951 321.0
DYD1_k127_3824540_6 Zn peptidase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000003136 279.0
DYD1_k127_3824540_7 Allows the formation of correctly charged Gln-tRNA(Gln) through the transamidation of misacylated Glu-tRNA(Gln) in organisms which lack glutaminyl-tRNA synthetase. The reaction takes place in the presence of glutamine and ATP through an activated gamma-phospho-Glu-tRNA(Gln) K02433 - 6.3.5.6,6.3.5.7 0.0000000000000000000000000000000000000000000000000000000000000000000000291 244.0
DYD1_k127_3824540_8 TIGRFAM DNA binding domain - - - 0.000000000000000000000001081 108.0
DYD1_k127_3824540_9 Domain of unknown function (DUF697) K03595 - - 0.0000000000000000000002335 111.0
DYD1_k127_3825576_0 Catalyzes the addition of an amino acid to the nucleotide precursor UDP-N-acetylmuramoyl-L-alanyl-D-glutamate (UMAG) in the biosynthesis of bacterial cell-wall peptidoglycan K01928 - 6.3.2.13 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009278 552.0
DYD1_k127_3825576_1 NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient K00343 - 1.6.5.3 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001789 452.0
DYD1_k127_3825576_2 TIGRFAM proton-translocating NADH-quinone oxidoreductase, chain M K00342 - 1.6.5.3 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002432 332.0
DYD1_k127_3825576_3 it plays a direct role in the translocation of protons across the membrane K02108 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000003814 300.0
DYD1_k127_3825576_4 F(1)F(0) ATP synthase produces ATP from ADP in the presence of a proton or sodium gradient. F-type ATPases consist of two structural domains, F(1) containing the extramembraneous catalytic core and F(0) containing the membrane proton channel, linked together by a central stalk and a peripheral stalk. During catalysis, ATP synthesis in the catalytic domain of F(1) is coupled via a rotary mechanism of the central stalk subunits to proton translocation K02109 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000005921 262.0
DYD1_k127_3825576_5 PFAM low molecular weight phosphotyrosine protein phosphatase K01104 - 3.1.3.48 0.0000000000000000000000000000000055 136.0
DYD1_k127_3825576_7 F(1)F(0) ATP synthase produces ATP from ADP in the presence of a proton or sodium gradient. F-type ATPases consist of two structural domains, F(1) containing the extramembraneous catalytic core and F(0) containing the membrane proton channel, linked together by a central stalk and a peripheral stalk. During catalysis, ATP synthesis in the catalytic domain of F(1) is coupled via a rotary mechanism of the central stalk subunits to proton translocation K02110 GO:0003674,GO:0003824,GO:0005215,GO:0005575,GO:0005622,GO:0005623,GO:0006139,GO:0006163,GO:0006164,GO:0006725,GO:0006753,GO:0006754,GO:0006793,GO:0006796,GO:0006807,GO:0006810,GO:0006811,GO:0006812,GO:0008150,GO:0008152,GO:0008324,GO:0009058,GO:0009117,GO:0009123,GO:0009124,GO:0009126,GO:0009127,GO:0009141,GO:0009142,GO:0009144,GO:0009145,GO:0009150,GO:0009152,GO:0009156,GO:0009161,GO:0009165,GO:0009167,GO:0009168,GO:0009199,GO:0009201,GO:0009205,GO:0009206,GO:0009259,GO:0009260,GO:0009987,GO:0015075,GO:0015077,GO:0015078,GO:0015318,GO:0015399,GO:0015405,GO:0015672,GO:0015985,GO:0015986,GO:0016020,GO:0016462,GO:0016469,GO:0016787,GO:0016817,GO:0016818,GO:0016887,GO:0017111,GO:0017144,GO:0018130,GO:0019438,GO:0019637,GO:0019693,GO:0019829,GO:0022804,GO:0022853,GO:0022857,GO:0022890,GO:0032991,GO:0033177,GO:0034220,GO:0034641,GO:0034654,GO:0042623,GO:0042625,GO:0042626,GO:0043492,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0044424,GO:0044425,GO:0044464,GO:0044769,GO:0045259,GO:0045263,GO:0046034,GO:0046390,GO:0046483,GO:0046933,GO:0051179,GO:0051234,GO:0055085,GO:0055086,GO:0071704,GO:0072521,GO:0072522,GO:0090407,GO:0090662,GO:0098655,GO:0098660,GO:0098662,GO:0098796,GO:0099131,GO:0099132,GO:1901135,GO:1901137,GO:1901293,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576,GO:1902600 - 0.00000000000002406 76.0
DYD1_k127_3827084_0 Short-chain dehydrogenase reductase SDR - - - 2.913e-247 780.0
DYD1_k127_3827084_1 Belongs to the DegT DnrJ EryC1 family K13010 - 2.6.1.102 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001073 499.0
DYD1_k127_3827084_2 Bacterial sugar transferase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007961 449.0
DYD1_k127_3827084_3 ADP-glyceromanno-heptose 6-epimerase activity K01784,K02473 - 5.1.3.2,5.1.3.7 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000002999 299.0
DYD1_k127_3827084_4 Methyltransferase K15256 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000003026 275.0
DYD1_k127_3827084_5 arylsulfatase activity - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000007664 284.0
DYD1_k127_3827084_6 PFAM Glycosyl transferase family 2 K00721 - 2.4.1.83 0.00000000000000000000000000000000000000000000000000000000000000000002126 248.0
DYD1_k127_3827084_7 arylsulfatase activity - - - 0.000000000000000000000000000000000000000000000006125 190.0
DYD1_k127_3827084_9 Lysylphosphatidylglycerol synthase TM region K07027 - - 0.000000000000000000000007836 115.0
DYD1_k127_3830717_0 Zinc phosphodiesterase, which displays some tRNA 3'- processing endonuclease activity. Probably involved in tRNA maturation, by removing a 3'-trailer from precursor tRNA K00784 - 3.1.26.11 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000258 423.0
DYD1_k127_3830717_1 Domain of unknown function (DUF2088) - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002554 367.0
DYD1_k127_3830717_2 urea carboxylase-associated protein 1 K09967 - - 0.00000000000000000000000000000000000000000448 164.0
DYD1_k127_3830717_3 regulatory protein, FmdB family - - - 0.00000000005147 65.0
DYD1_k127_3834508_0 protein secretion by the type VII secretion system - - - 0.0000000000000000000000000000000000000000000000000000000009636 229.0
DYD1_k127_3834508_1 von Willebrand factor type A domain K07114 - - 0.000000005544 70.0
DYD1_k127_3834508_2 Plays a central role in chromosome condensation, segregation and cell cycle progression. Functions as a homodimer, which is essential for chromosome partition. Involved in negative DNA supercoiling in vivo, and by this means organize and compact chromosomes. May achieve or facilitate chromosome segregation by condensation DNA from both sides of a centrally located replisome during cell division - - - 0.00004653 57.0
DYD1_k127_3862480_0 Belongs to the thiolase family K00626 - 2.3.1.9 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003311 441.0
DYD1_k127_3862480_1 3-hydroxyacyl-CoA dehydrogenase K00074 - 1.1.1.157 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003953 334.0
DYD1_k127_3862480_2 Allows the formation of correctly charged Asn-tRNA(Asn) or Gln-tRNA(Gln) through the transamidation of misacylated Asp- tRNA(Asn) or Glu-tRNA(Gln) in organisms which lack either or both of asparaginyl-tRNA or glutaminyl-tRNA synthetases. The reaction takes place in the presence of glutamine and ATP through an activated phospho-Asp-tRNA(Asn) or phospho-Glu-tRNA(Gln) K02434 - 6.3.5.6,6.3.5.7 0.00000000000000000000000000000000000000000000000000000000000005974 218.0
DYD1_k127_3862480_3 PFAM Histidine triad (HIT) protein K19710 - 2.7.7.53 0.0000000000000000000000000000000000000000000000000009666 190.0
DYD1_k127_3862480_4 Acts both as a biotin-- acetyl-CoA-carboxylase ligase and a repressor K03524 - 6.3.4.15 0.000001858 51.0
DYD1_k127_3874101_0 ABC transporter K02056 - 3.6.3.17 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002318 483.0
DYD1_k127_3874101_1 Belongs to the binding-protein-dependent transport system permease family K02057 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005214 344.0
DYD1_k127_3874101_2 PFAM Branched-chain amino acid transport system permease component K02057 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000641 266.0
DYD1_k127_3874101_3 Metallo-beta-lactamase superfamily K06897 - 2.5.1.105 0.00000000000000000000000000000000000000000000000000000000000131 222.0
DYD1_k127_3874101_4 dimethylargininase activity - - - 0.00000000000000000000000000000000000000001049 166.0
DYD1_k127_3882463_0 Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released K03086 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001402 467.0
DYD1_k127_3882463_1 Pyrophosphatase that catalyzes the hydrolysis of nucleoside triphosphates to their monophosphate derivatives, with a high preference for the non-canonical purine nucleotides XTP (xanthosine triphosphate), dITP (deoxyinosine triphosphate) and ITP. Seems to function as a house-cleaning enzyme that removes non-canonical purine nucleotides from the nucleotide pool, thus preventing their incorporation into DNA RNA and avoiding chromosomal lesions K02428 - 3.6.1.66 0.00000000000000000000000000000000000000000000000000000005637 202.0
DYD1_k127_3882463_2 metal-binding, possibly nucleic acid-binding protein K07040 GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0008150,GO:0040007,GO:0044424,GO:0044444,GO:0044464 - 0.000000000000000000000000000001399 127.0
DYD1_k127_3882463_3 Alpha beta hydrolase - - - 0.00000000000000005504 82.0
DYD1_k127_3882463_4 Phospholipid methyltransferase - - - 0.0003059 46.0
DYD1_k127_3896168_0 Belongs to the glycosyl hydrolase 57 family K16149 - 2.4.1.18 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000295 517.0
DYD1_k127_3896168_1 electron transfer flavoprotein, alpha subunit K03522,K22432 - 1.3.1.108 0.0000000000000000000000000000000000000000000000000000000000000000000000001409 260.0
DYD1_k127_3896168_2 Electron transfer flavoprotein domain K03521 - - 0.0000000000000000000000000000000000000003516 158.0
DYD1_k127_3943621_0 NfeD-like C-terminal, partner-binding K07403 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009556 465.0
DYD1_k127_3943621_1 Spermine/spermidine synthase domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002077 378.0
DYD1_k127_3943621_2 PFAM Glycosyl transferase family 2 - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003985 314.0
DYD1_k127_3943621_3 Catalyzes the methyl esterification of L-isoaspartyl residues in peptides and proteins that result from spontaneous decomposition of normal L-aspartyl and L-asparaginyl residues. It plays a role in the repair and or degradation of damaged proteins K00573 - 2.1.1.77 0.0000000000000000000000000000000000000000000000000000000000000000009411 241.0
DYD1_k127_3943621_4 Endonuclease that specifically degrades the RNA of RNA- DNA hybrids K03470 GO:0003674,GO:0003824,GO:0004518,GO:0004519,GO:0004521,GO:0004523,GO:0004540,GO:0005575,GO:0005622,GO:0005623,GO:0006139,GO:0006259,GO:0006260,GO:0006261,GO:0006271,GO:0006273,GO:0006281,GO:0006298,GO:0006401,GO:0006725,GO:0006807,GO:0006950,GO:0006974,GO:0008150,GO:0008152,GO:0009056,GO:0009057,GO:0009058,GO:0009059,GO:0009987,GO:0016070,GO:0016787,GO:0016788,GO:0016891,GO:0016893,GO:0019439,GO:0022616,GO:0032299,GO:0032991,GO:0033554,GO:0033567,GO:0034641,GO:0034645,GO:0034655,GO:0043137,GO:0043170,GO:0044237,GO:0044238,GO:0044248,GO:0044249,GO:0044260,GO:0044265,GO:0044270,GO:0044424,GO:0044464,GO:0046483,GO:0046700,GO:0050896,GO:0051716,GO:0071704,GO:0090304,GO:0090305,GO:0090501,GO:0090502,GO:0140098,GO:1901360,GO:1901361,GO:1901575,GO:1901576 3.1.26.4 0.00000000000000000000000000000000000000000000000001331 205.0
DYD1_k127_3943621_5 phospholipase Carboxylesterase - - - 0.0000000000000000000000000000000000000000000005752 179.0
DYD1_k127_3943621_6 acetyl coenzyme A synthetase K01905,K22224 - 6.2.1.13 0.000000000000000000000000007674 117.0
DYD1_k127_3943621_7 histone H2A K63-linked ubiquitination - - - 0.0000000000000000002644 95.0
DYD1_k127_3976775_0 Histidine kinase HAMP K02482 - 2.7.13.3 0.0000000000000000000000000000000000000000000000000000009442 215.0
DYD1_k127_3976775_1 PFAM GGDEF domain containing protein - - - 0.00000000000000000000000000000000000000000000000002234 192.0
DYD1_k127_3976775_2 PFAM ComEC Rec2-related protein K02238 - - 0.000000000000000000000000000000000000000002239 171.0
DYD1_k127_4024253_0 GMC oxidoreductase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009785 595.0
DYD1_k127_4024253_1 PFAM aldehyde ferredoxin oxidoreductase K03738 - 1.2.7.5 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005264 582.0
DYD1_k127_4024253_2 Bifunctional enzyme that catalyzes the epimerization of the S- and R-forms of NAD(P)HX and the dehydration of the S-form of NAD(P)HX at the expense of ADP, which is converted to AMP. This allows the repair of both epimers of NAD(P)HX, a damaged form of NAD(P)H that is a result of enzymatic or heat-dependent hydration K17758,K17759 - 4.2.1.136,5.1.99.6 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007093 398.0
DYD1_k127_4024253_3 PFAM metal-dependent phosphohydrolase, HD sub domain K01129 - 3.1.5.1 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000231 354.0
DYD1_k127_4024253_4 SCP-2 sterol transfer family - - - 0.0000000000000000001439 93.0
DYD1_k127_403818_0 TIGRFAM methylmalonyl-CoA mutase, large subunit K01847,K01848 - 5.4.99.2 1.678e-234 737.0
DYD1_k127_403818_1 Belongs to the thiolase family - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008994 577.0
DYD1_k127_403818_2 Catalyzes the condensation of (S)-aspartate-beta- semialdehyde (S)-ASA and pyruvate to 4-hydroxy- tetrahydrodipicolinate (HTPA) K01714 - 4.3.3.7 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002395 377.0
DYD1_k127_403818_3 PFAM Glyoxalase bleomycin resistance protein dioxygenase K05606 - 5.1.99.1 0.0000000000000000000000000000000000000000000002755 170.0
DYD1_k127_403818_4 CYTH domain K05873 - 4.6.1.1 0.0000000000000000000000000000000002458 139.0
DYD1_k127_403818_5 CoA carboxylase activity K01965,K02160 - 6.4.1.3 0.0000000000000000000000000003498 124.0
DYD1_k127_403818_6 Carbamoyl-phosphate synthetase large chain domain protein K01961,K01968,K11263 - 6.3.4.14,6.4.1.2,6.4.1.3,6.4.1.4 0.00000000000000002792 85.0
DYD1_k127_4041986_0 Catalyzes the transfer of a two-carbon ketol group from a ketose donor to an aldose acceptor, via a covalent intermediate with the cofactor thiamine pyrophosphate K00615 - 2.2.1.1 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008477 577.0
DYD1_k127_4041986_1 Belongs to the GcvT family K00605 - 2.1.2.10 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004812 441.0
DYD1_k127_4041986_2 XanTHIne and CO dehydrogenases maturation factor, XdhC CoxF family K07402 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000008879 287.0
DYD1_k127_4041986_3 Serine threonine protein kinase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000002036 280.0
DYD1_k127_4057023_0 ATP-dependent specificity component of the Clp protease. It directs the protease to specific substrates. Can perform chaperone functions in the absence of ClpP K03544 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000128 491.0
DYD1_k127_4057023_1 Specifically methylates position 2 of adenine 2503 in 23S rRNA and position 2 of adenine 37 in tRNAs K06941 GO:0000154,GO:0001510,GO:0003674,GO:0003824,GO:0006139,GO:0006364,GO:0006396,GO:0006399,GO:0006400,GO:0006725,GO:0006807,GO:0008033,GO:0008150,GO:0008152,GO:0008168,GO:0008173,GO:0008175,GO:0008649,GO:0008757,GO:0009451,GO:0009987,GO:0010467,GO:0016070,GO:0016072,GO:0016740,GO:0016741,GO:0022613,GO:0030488,GO:0031167,GO:0032259,GO:0034470,GO:0034641,GO:0034660,GO:0042254,GO:0043170,GO:0043412,GO:0043414,GO:0044085,GO:0044237,GO:0044238,GO:0044260,GO:0046483,GO:0070475,GO:0071704,GO:0071840,GO:0090304,GO:0140098,GO:0140101,GO:0140102,GO:1901360 2.1.1.192 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002059 396.0
DYD1_k127_4057023_2 histidine kinase, dimerisation and phosphoacceptor region - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004313 351.0
DYD1_k127_4057023_3 Cleaves peptides in various proteins in a process that requires ATP hydrolysis. Has a chymotrypsin-like activity. Plays a major role in the degradation of misfolded proteins K01358 - 3.4.21.92 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000002617 284.0
DYD1_k127_4057023_4 Belongs to the ribulose-phosphate 3-epimerase family K01783 GO:0003674,GO:0003824,GO:0004750,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005975,GO:0005996,GO:0006081,GO:0006098,GO:0006139,GO:0006725,GO:0006732,GO:0006733,GO:0006739,GO:0006753,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0009052,GO:0009056,GO:0009117,GO:0009987,GO:0016052,GO:0016853,GO:0016854,GO:0016857,GO:0019321,GO:0019323,GO:0019362,GO:0019637,GO:0019682,GO:0019693,GO:0034641,GO:0043167,GO:0043169,GO:0044237,GO:0044238,GO:0044262,GO:0044281,GO:0044282,GO:0044424,GO:0044444,GO:0044464,GO:0046365,GO:0046483,GO:0046496,GO:0046872,GO:0051156,GO:0051186,GO:0055086,GO:0071704,GO:0072524,GO:1901135,GO:1901360,GO:1901564,GO:1901575 5.1.3.1 0.000000000000000000000000000000000000000000000000000000000000000000003637 243.0
DYD1_k127_4057023_5 Involved in protein export. Acts as a chaperone by maintaining the newly synthesized protein in an open conformation. Functions as a peptidyl-prolyl cis-trans isomerase K03545 GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0044424,GO:0044464 - 0.00000000000000000000000000000000000000000000000000000000000000001094 242.0
DYD1_k127_4057023_6 Belongs to the HAD-like hydrolase superfamily K01101 - 3.1.3.41 0.00000000000000000000000000000000000000000000000000000000000007339 222.0
DYD1_k127_4057023_7 ribosomal protein L28 K02902 - - 0.000000000000005339 76.0
DYD1_k127_405831_0 4-amino-4-deoxy-L-arabinose transferase and related glycosyltransferases of PMT family - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004924 357.0
DYD1_k127_405831_1 oligosaccharyl transferase activity - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001154 334.0
DYD1_k127_405831_3 4-amino-4-deoxy-L-arabinose transferase activity - - - 0.000001516 59.0
DYD1_k127_4059502_0 Serine threonine protein kinase K08884,K12132 - 2.7.11.1 0.0000000000000000000000000000000000000000000000000000000000000000000000115 253.0
DYD1_k127_4059502_1 Nucleotidase that shows phosphatase activity on nucleoside 5'-monophosphates K03787 - 3.1.3.5 0.000000000000000000000000000000000000000000000000000000000000000000002479 244.0
DYD1_k127_4059502_2 Phosphomethylpyrimidine kinase K00852 - 2.7.1.15 0.0000000000000000000000000000000000000000000009787 172.0
DYD1_k127_4059502_3 Domain of unknown function (DU1801) - - - 0.000000000000000000000000000000001319 135.0
DYD1_k127_4093910_0 Belongs to the UPF0758 family K03630 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000001454 261.0
DYD1_k127_4093910_1 PFAM Auxin Efflux Carrier K07088 - - 0.00000000000000000000000000000000000000000245 168.0
DYD1_k127_4093910_2 sh3 domain protein K01227,K03642 - 3.2.1.96 0.00000000000000000000000000008747 132.0
DYD1_k127_4103012_0 TIGRFAM DNA polymerase III, alpha subunit K02337 - 2.7.7.7 0.0 1369.0
DYD1_k127_4103012_1 ABC transporter K06147 - - 2.502e-242 768.0
DYD1_k127_4103012_10 Insulinase (Peptidase family M16) K07263 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000005428 300.0
DYD1_k127_4103012_11 Peptidoglycan-binding LysM - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000111 288.0
DYD1_k127_4103012_12 Responsible for the release of ribosomes from messenger RNA at the termination of protein biosynthesis. May increase the efficiency of translation by recycling ribosomes from one round of translation to another K02838 GO:0002181,GO:0002184,GO:0003674,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006412,GO:0006415,GO:0006518,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0016043,GO:0019538,GO:0022411,GO:0032984,GO:0034641,GO:0034645,GO:0043021,GO:0043023,GO:0043043,GO:0043170,GO:0043603,GO:0043604,GO:0043624,GO:0043933,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044424,GO:0044464,GO:0044877,GO:0071704,GO:0071840,GO:1901564,GO:1901566,GO:1901576 - 0.00000000000000000000000000000000000000000000000000000000000000000000002951 258.0
DYD1_k127_4103012_13 Associates with the EF-Tu.GDP complex and induces the exchange of GDP to GTP. It remains bound to the aminoacyl-tRNA.EF- Tu.GTP complex up to the GTP hydrolysis stage on the ribosome K02357 - - 0.000000000000000000000000000000000000000000000000000000000000000001595 234.0
DYD1_k127_4103012_14 TIGRFAM geranylgeranyl reductase K21401 - 1.3.99.38 0.000000000000000000000000000000000000000000000000000000000000000007177 241.0
DYD1_k127_4103012_15 Belongs to the CDS family K00981 - 2.7.7.41 0.0000000000000000000000000000000000000000000000000000000000000004677 229.0
DYD1_k127_4103012_16 PFAM sigma-70 region 2 domain protein K03088 - - 0.00000000000000000000000000000000000000000000000000001803 196.0
DYD1_k127_4103012_17 Polymer-forming cytoskeletal - - - 0.000000000000000000000000000000000000000000000000009226 194.0
DYD1_k127_4103012_18 3-demethylubiquinone-9 3-O-methyltransferase activity - - - 0.000000000000000000000000000000000000000003337 177.0
DYD1_k127_4103012_19 Transfers the 4'-phosphopantetheine moiety from coenzyme A to a Ser of acyl-carrier-protein K00997 - 2.7.8.7 0.00000000000000000000000001561 112.0
DYD1_k127_4103012_2 Radical_SAM C-terminal domain K07739 - 2.3.1.48 1.493e-217 697.0
DYD1_k127_4103012_3 Facilitates transcription termination by a mechanism that involves Rho binding to the nascent RNA, activation of Rho's RNA-dependent ATPase activity, and release of the mRNA from the DNA template K03628 - - 2.383e-198 626.0
DYD1_k127_4103012_4 TIGRFAM fructose-1,6-bisphosphatase, class II K02446 - 3.1.3.11 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007289 430.0
DYD1_k127_4103012_5 Belongs to the universal ribosomal protein uS2 family K02967 GO:0003674,GO:0003735,GO:0005198,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0006412,GO:0006518,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0015935,GO:0019538,GO:0022626,GO:0022627,GO:0032991,GO:0034641,GO:0034645,GO:0043043,GO:0043170,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:0071704,GO:1901564,GO:1901566,GO:1901576,GO:1990904 - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007129 359.0
DYD1_k127_4103012_6 Peptidoglycan-binding LysM - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004872 342.0
DYD1_k127_4103012_7 Catalyzes the reversible phosphorylation of UMP to UDP K09903 GO:0003674,GO:0003824,GO:0006139,GO:0006725,GO:0006753,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0009041,GO:0009058,GO:0009117,GO:0009123,GO:0009165,GO:0009987,GO:0015949,GO:0016301,GO:0016310,GO:0016740,GO:0016772,GO:0016776,GO:0018130,GO:0019205,GO:0019438,GO:0019637,GO:0034641,GO:0034654,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0046483,GO:0046940,GO:0050145,GO:0055086,GO:0071704,GO:0090407,GO:1901293,GO:1901360,GO:1901362,GO:1901576 2.7.4.22 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003301 329.0
DYD1_k127_4103012_8 Peptidoglycan-binding LysM - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001294 321.0
DYD1_k127_4103012_9 Catalyzes the condensation of isopentenyl diphosphate (IPP) with allylic pyrophosphates generating different type of terpenoids K00806 - 2.5.1.31 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001037 308.0
DYD1_k127_4104526_0 Catalyzes the reduction of nitrite to ammonia, consuming six electrons in the process - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001425 383.0
DYD1_k127_4104526_1 PFAM peptidase S1 and S6, chymotrypsin Hap - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003712 316.0
DYD1_k127_4104526_2 Trypsin-like peptidase domain K04771 - 3.4.21.107 0.00000000000000000000000000000000000006394 158.0
DYD1_k127_4105846_0 TIGRFAM methylmalonyl-CoA mutase, large subunit K01848 - 5.4.99.2 4.355e-244 773.0
DYD1_k127_4105846_1 Aldehyde dehydrogenase family K00151 - 1.2.1.60 5.916e-207 658.0
DYD1_k127_4105846_2 4-hydroxyphenylacetate 3-hydroxylase C terminal K00483 - 1.14.14.9 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001933 610.0
DYD1_k127_4105846_3 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009008 425.0
DYD1_k127_4105846_4 fumarylacetoacetate (FAA) hydrolase K05921 - 4.1.1.68 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006594 318.0
DYD1_k127_4105846_5 - - - - 0.000000000000000000000000000000000000000001493 168.0
DYD1_k127_4105846_6 Flavin reductase like domain - - - 0.00000000000000000000000000000000000000578 162.0
DYD1_k127_4105846_7 Alpha/beta hydrolase family - - - 0.000000000000000002123 91.0
DYD1_k127_4105846_8 Bacterial membrane protein, YfhO - - - 0.00000000001678 78.0
DYD1_k127_4113101_0 ATPase associated with various cellular activities, AAA_5 K03696 - - 0.0 1264.0
DYD1_k127_4113101_1 A G-specific adenine glycosylase K03575 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001702 347.0
DYD1_k127_4113101_2 May be involved in recombinational repair of damaged DNA K03631 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000008222 278.0
DYD1_k127_4113101_3 Peptidase family M41 - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000117 282.0
DYD1_k127_4113101_4 PFAM O-methyltransferase, family 3 - - - 0.000000000000000000000000000000000000000000000000000000002169 222.0
DYD1_k127_4113101_5 WD40-like Beta Propeller Repeat - - - 0.000000000000000000000000006842 125.0
DYD1_k127_4138834_0 Belongs to the ParB family K03497 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000267 287.0
DYD1_k127_4138834_1 reductase K00059 - 1.1.1.100 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000008753 282.0
DYD1_k127_4138834_2 Part of the twin-arginine translocation (Tat) system that transports large folded proteins containing a characteristic twin-arginine motif in their signal peptide across membranes K03118 - - 0.00000000000000000000000000000000000000000000000000000000000002087 224.0
DYD1_k127_4138834_3 Cellulose biosynthesis protein BcsQ K03496 GO:0008150,GO:0022603,GO:0042173,GO:0042174,GO:0043937,GO:0043939,GO:0045595,GO:0045596,GO:0048519,GO:0048523,GO:0050789,GO:0050793,GO:0050794,GO:0051093,GO:0065007 - 0.000000000000000000000000000000000000000000000000000000000128 209.0
DYD1_k127_4138834_4 Involved in transcription antitermination. Required for transcription of ribosomal RNA (rRNA) genes. Binds specifically to the boxA antiterminator sequence of the ribosomal RNA (rrn) operons K03625 - - 0.0000000000000000000000000000000000000002976 159.0
DYD1_k127_4138834_5 cellulase activity - - - 0.0000000000000000000000003655 111.0
DYD1_k127_4138834_6 Asp23 family, cell envelope-related function - - - 0.000000000000000001198 99.0
DYD1_k127_4138834_7 protein secretion K03116,K03117 GO:0003674,GO:0005215,GO:0005488,GO:0005515,GO:0005575,GO:0005623,GO:0005886,GO:0005887,GO:0006810,GO:0006886,GO:0008104,GO:0008150,GO:0008320,GO:0008565,GO:0009977,GO:0015031,GO:0015291,GO:0015399,GO:0015405,GO:0015450,GO:0015833,GO:0016020,GO:0016021,GO:0022804,GO:0022857,GO:0022884,GO:0031224,GO:0031226,GO:0032991,GO:0033036,GO:0033281,GO:0034613,GO:0040007,GO:0042802,GO:0042886,GO:0042887,GO:0043953,GO:0044425,GO:0044459,GO:0044464,GO:0045184,GO:0046907,GO:0051179,GO:0051234,GO:0051641,GO:0051649,GO:0055085,GO:0065002,GO:0070727,GO:0071702,GO:0071705,GO:0071806,GO:0071944,GO:0098796,GO:0098797,GO:1904680 - 0.00000005281 59.0
DYD1_k127_4139513_0 phosphoglucomutase phosphomannomutase alpha beta alpha domain I K01840 - 5.4.2.8 6.883e-206 658.0
DYD1_k127_4139513_1 Plays an important role in DNA replication, recombination and repair. Binds to ssDNA and to an array of partner proteins to recruit them to their sites of action during DNA metabolism K03111 - - 0.0000000000000000000000000000000000000000000000000000008269 194.0
DYD1_k127_4139513_2 TatD related DNase K03424 GO:0003674,GO:0003824,GO:0004518,GO:0004536,GO:0006139,GO:0006259,GO:0006308,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0009056,GO:0009057,GO:0009987,GO:0016787,GO:0016788,GO:0019439,GO:0034641,GO:0034655,GO:0043170,GO:0044237,GO:0044238,GO:0044248,GO:0044260,GO:0044265,GO:0044270,GO:0046483,GO:0046700,GO:0071704,GO:0090304,GO:0090305,GO:0140097,GO:1901360,GO:1901361,GO:1901575 - 0.000000000000000000000000000000000000000000006714 170.0
DYD1_k127_4139513_3 Binds as a heterodimer with protein S6 to the central domain of the 16S rRNA, where it helps stabilize the platform of the 30S subunit K02963 - - 0.0000000000000000000001528 99.0
DYD1_k127_4139513_4 Binds together with S18 to 16S ribosomal RNA K02990 - - 0.00000000000000000003632 94.0
DYD1_k127_4139513_5 PFAM PpiC-type peptidyl-prolyl cis-trans isomerase - - - 0.000004514 51.0
DYD1_k127_4149142_0 FAD-dependent pyridine nucleotide-disulphide oxidoreductase K00384 - 1.8.1.9 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003955 379.0
DYD1_k127_4149142_1 histidine kinase, dimerisation and phosphoacceptor region - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000001452 317.0
DYD1_k127_4149142_2 Zn peptidase - - - 0.0000000000000000000000000000000000000000006363 175.0
DYD1_k127_4152583_0 Belongs to the class-II aminoacyl-tRNA synthetase family K04567 - 6.1.1.6 2.552e-227 714.0
DYD1_k127_4152583_1 phosphorelay sensor kinase activity K01768 - 4.6.1.1 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003892 363.0
DYD1_k127_4152583_10 translation initiation factor activity - - - 0.00000000000000000000000002174 116.0
DYD1_k127_4152583_11 Sucrose-6F-phosphate phosphohydrolase - - - 0.00000000000000000000003694 108.0
DYD1_k127_4152583_12 HAD-hyrolase-like K07025 - - 0.00000000000000002653 83.0
DYD1_k127_4152583_2 Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released K03086 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000245 341.0
DYD1_k127_4152583_3 Peptidase family S58 K01266 - 3.4.11.19 0.00000000000000000000000000000000000000000000000000000000000000000000000000001014 270.0
DYD1_k127_4152583_4 Xylose isomerase-like TIM barrel - - - 0.00000000000000000000000000000000000000000000000000000009437 215.0
DYD1_k127_4152583_5 HD domain K07814 - - 0.0000000000000000000000000000000000000000000000000003513 209.0
DYD1_k127_4152583_6 Redoxin K03564 - 1.11.1.15 0.00000000000000000000000000000000000000000000000009765 181.0
DYD1_k127_4152583_7 Necessary for efficient RNA polymerase transcription elongation past template-encoded arresting sites. The arresting sites in DNA have the property of trapping a certain fraction of elongating RNA polymerases that pass through, resulting in locked ternary complexes. Cleavage of the nascent transcript by cleavage factors such as GreA or GreB allows the resumption of elongation from the new 3'terminus. GreA releases sequences of 2 to 3 nucleotides K03624 - - 0.0000000000000000000000000000000000000000000000126 175.0
DYD1_k127_4152583_8 PHP domain protein K07053 - 3.1.3.97 0.0000000000000000000000000000000000000000000000406 184.0
DYD1_k127_4152583_9 PFAM conserved - - - 0.00000000000000000000000000000000000003345 148.0
DYD1_k127_4163732_0 - - - - 6.925e-195 615.0
DYD1_k127_4163732_1 IMP dehydrogenase activity K03406,K15371 - 1.4.1.2 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008888 492.0
DYD1_k127_4163732_2 Catalyzes the reversible reaction in which hydroxymethyl group from 5,10-methylenetetrahydrofolate is transferred onto alpha-ketoisovalerate to form ketopantoate K00606 - 2.1.2.11 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000001337 293.0
DYD1_k127_4163732_3 PFAM aspartate glutamate uridylate kinase K06981 - 2.7.4.26 0.00000000000000000000000000000000000000000000000000000001368 213.0
DYD1_k127_4163732_4 GHMP kinases C terminal K00054,K00869,K01641 - 1.1.1.88,2.3.3.10,2.7.1.36 0.00000000000000000000000000000000000000000000000483 179.0
DYD1_k127_4163732_5 CarD-like/TRCF domain K07736 - - 0.000000387 59.0
DYD1_k127_4186612_0 SMART alpha amylase, catalytic sub domain K01187 - 3.2.1.20 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002145 597.0
DYD1_k127_4186612_1 ABC-type sugar transport system periplasmic component K10232 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001869 483.0
DYD1_k127_4186612_2 PFAM Binding-protein-dependent transport system inner membrane component K10119,K10234 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002172 384.0
DYD1_k127_4186612_3 PFAM Binding-protein-dependent transport system inner membrane component K02025,K10233 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001703 366.0
DYD1_k127_4186612_4 PFAM ABC transporter related K09820,K11710 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000003476 296.0
DYD1_k127_4186612_5 ABC-3 protein K09819 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000004747 289.0
DYD1_k127_4186612_6 PFAM SH3 type 3 domain protein - - - 0.000404 47.0
DYD1_k127_4186612_7 photosynthesis K02656 - - 0.0006739 50.0
DYD1_k127_424898_0 Produces ATP from ADP in the presence of a proton gradient across the membrane. The alpha chain is a regulatory subunit K02111 - 3.6.3.14 3.141e-243 763.0
DYD1_k127_424898_1 Involved in the gluconeogenesis. Catalyzes the conversion of oxaloacetate (OAA) to phosphoenolpyruvate (PEP) through direct phosphoryl transfer between the nucleoside triphosphate and OAA K01610 - 4.1.1.49 1.162e-232 731.0
DYD1_k127_424898_10 One of the primary rRNA binding proteins, it binds directly to 16S rRNA where it nucleates assembly of the body of the 30S subunit K02986 GO:0003674,GO:0003676,GO:0003723,GO:0003735,GO:0005198,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005840,GO:0006417,GO:0006450,GO:0008150,GO:0009889,GO:0009891,GO:0009893,GO:0010468,GO:0010556,GO:0010557,GO:0010604,GO:0010608,GO:0010628,GO:0015935,GO:0019222,GO:0019843,GO:0031323,GO:0031325,GO:0031326,GO:0031328,GO:0032268,GO:0032270,GO:0032991,GO:0034248,GO:0034250,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044446,GO:0044464,GO:0045727,GO:0045903,GO:0048518,GO:0048522,GO:0050789,GO:0050794,GO:0051171,GO:0051173,GO:0051246,GO:0051247,GO:0060255,GO:0065007,GO:0065008,GO:0080090,GO:0097159,GO:1901363,GO:1990904,GO:2000112 - 0.000000000000000000000000000000000000000000000000000000000000000000000000000001265 268.0
DYD1_k127_424898_11 Protein of unknown function DUF72 - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000003899 276.0
DYD1_k127_424898_12 TIGRFAM zinc-binding alcohol dehydrogenase family protein K13953 - 1.1.1.1 0.000000000000000000000000000000000000000000000000000000000000000000000000001813 274.0
DYD1_k127_424898_13 ABC transporter K02003 - - 0.00000000000000000000000000000000000000000000000000000000000000000001929 244.0
DYD1_k127_424898_14 Formation of pseudouridine at positions 38, 39 and 40 in the anticodon stem and loop of transfer RNAs K06173 GO:0001522,GO:0003674,GO:0003824,GO:0006139,GO:0006396,GO:0006399,GO:0006400,GO:0006725,GO:0006807,GO:0008033,GO:0008150,GO:0008152,GO:0009451,GO:0009982,GO:0009987,GO:0010467,GO:0016070,GO:0016853,GO:0016866,GO:0031119,GO:0034470,GO:0034641,GO:0034660,GO:0043170,GO:0043412,GO:0044237,GO:0044238,GO:0046483,GO:0071704,GO:0090304,GO:1901360 5.4.99.12 0.00000000000000000000000000000000000000000000000000000000000001646 223.0
DYD1_k127_424898_15 GAF domain - - - 0.000000000000000000000000000000000000000000000000000000000000384 227.0
DYD1_k127_424898_16 Located at the top of the head of the 30S subunit, it contacts several helices of the 16S rRNA. In the 70S ribosome it contacts the 23S rRNA (bridge B1a) and protein L5 of the 50S subunit (bridge B1b), connecting the 2 subunits K02952 GO:0003674,GO:0003735,GO:0005198,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0006412,GO:0006518,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0015935,GO:0019538,GO:0022613,GO:0032991,GO:0034641,GO:0034645,GO:0042254,GO:0043043,GO:0043170,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043603,GO:0043604,GO:0044085,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044446,GO:0044464,GO:0071704,GO:0071840,GO:1901564,GO:1901566,GO:1901576,GO:1990904 - 0.0000000000000000000000000000000000000000000000000000000001126 205.0
DYD1_k127_424898_17 This protein is one of the early assembly proteins of the 50S ribosomal subunit, although it is not seen to bind rRNA by itself. It is important during the early stages of 50S assembly K02871 GO:0003674,GO:0003676,GO:0003723,GO:0003729,GO:0003735,GO:0005198,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0006412,GO:0006518,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0015934,GO:0019538,GO:0022625,GO:0022626,GO:0032991,GO:0034641,GO:0034645,GO:0043043,GO:0043170,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:0071704,GO:0097159,GO:1901363,GO:1901564,GO:1901566,GO:1901576,GO:1990904 - 0.0000000000000000000000000000000000000000000000000001958 188.0
DYD1_k127_424898_18 Located on the platform of the 30S subunit, it bridges several disparate RNA helices of the 16S rRNA. Forms part of the Shine-Dalgarno cleft in the 70S ribosome K02948 - - 0.00000000000000000000000000000000000000000000000005785 183.0
DYD1_k127_424898_19 Nuclease that resolves Holliday junction intermediates in genetic recombination. Cleaves the cruciform structure in supercoiled DNA by nicking to strands with the same polarity at sites symmetrically opposed at the junction in the homologous arms and leaves a 5'-terminal phosphate and a 3'-terminal hydroxyl group K01159 GO:0000725,GO:0003674,GO:0003824,GO:0004518,GO:0004519,GO:0004520,GO:0004536,GO:0005575,GO:0005622,GO:0005623,GO:0006139,GO:0006259,GO:0006260,GO:0006261,GO:0006281,GO:0006310,GO:0006725,GO:0006807,GO:0006950,GO:0006974,GO:0008150,GO:0008152,GO:0008821,GO:0009058,GO:0009059,GO:0009987,GO:0016787,GO:0016788,GO:0016889,GO:0016894,GO:0031297,GO:0032991,GO:0033554,GO:0034641,GO:0034645,GO:0043170,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044424,GO:0044464,GO:0045005,GO:0046483,GO:0048476,GO:0050896,GO:0051716,GO:0071704,GO:0071932,GO:0090304,GO:0090305,GO:0140097,GO:1901360,GO:1901576 3.1.22.4 0.00000000000000000000000000000000000000000000000005928 182.0
DYD1_k127_424898_2 MacB-like periplasmic core domain K02004 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001229 624.0
DYD1_k127_424898_20 The RuvA-RuvB complex in the presence of ATP renatures cruciform structure in supercoiled DNA with palindromic sequence, indicating that it may promote strand exchange reactions in homologous recombination. RuvAB is a helicase that mediates the Holliday junction migration by localized denaturation and reannealing. RuvA stimulates, in the presence of DNA, the weak ATPase activity of RuvB K03550 - 3.6.4.12 0.000000000000000000000000000000000000000000000001089 185.0
DYD1_k127_424898_21 Produces ATP from ADP in the presence of a proton gradient across the membrane. The gamma chain is believed to be important in regulating ATPase activity and the flow of protons through the CF(0) complex K02115 - - 0.000000000000000000000000000000000000000000006475 166.0
DYD1_k127_424898_22 Belongs to the universal ribosomal protein uS9 family K02996 - - 0.00000000000000000000000000000000002149 138.0
DYD1_k127_424898_23 Ribosomal protein L17 K02879 GO:0003674,GO:0003735,GO:0005198,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0015934,GO:0022625,GO:0022626,GO:0032991,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:1990904 - 0.000000000000000000000000000000000106 145.0
DYD1_k127_424898_24 Calcineurin-like phosphoesterase - GO:0005575,GO:0005623,GO:0005886,GO:0016020,GO:0044464,GO:0071944 - 0.000000000000000000000165 112.0
DYD1_k127_424898_25 Catalyzes the reversible transfer of the terminal phosphate group between ATP and AMP. Plays an important role in cellular energy homeostasis and in adenine nucleotide metabolism K00939 - 2.7.4.3 0.0000000000000000000003101 98.0
DYD1_k127_424898_26 Alcohol dehydrogenase GroES-like domain K13953 - 1.1.1.1 0.00000000000000008377 83.0
DYD1_k127_424898_27 Belongs to the bacterial ribosomal protein bL36 family K02919 GO:0003674,GO:0003735,GO:0005198,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0006412,GO:0006518,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0015934,GO:0019538,GO:0022625,GO:0022626,GO:0032991,GO:0034641,GO:0034645,GO:0043043,GO:0043170,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:0071704,GO:1901564,GO:1901566,GO:1901576,GO:1990904 - 0.000000000001599 67.0
DYD1_k127_424898_28 COG2010 Cytochrome c, mono- and diheme variants K02305 - - 0.000000001512 64.0
DYD1_k127_424898_3 DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates K03040 GO:0003674,GO:0003824,GO:0003899,GO:0006139,GO:0006351,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0016070,GO:0016740,GO:0016772,GO:0016779,GO:0018130,GO:0019438,GO:0032774,GO:0034062,GO:0034641,GO:0034645,GO:0034654,GO:0043170,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044271,GO:0046483,GO:0071704,GO:0090304,GO:0097659,GO:0097747,GO:0140098,GO:1901360,GO:1901362,GO:1901576 2.7.7.6 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001562 447.0
DYD1_k127_424898_4 TIGRFAM MazG family protein K02499 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000733 455.0
DYD1_k127_424898_5 PFAM M42 glutamyl aminopeptidase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007276 395.0
DYD1_k127_424898_6 Lipocalin-like domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000123 392.0
DYD1_k127_424898_7 TIGRFAM methionine aminopeptidase, type I K01265 - 3.4.11.18 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004954 316.0
DYD1_k127_424898_8 Catalyzes the reduction of 1-pyrroline-5-carboxylate (PCA) to L-proline K00286 - 1.5.1.2 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000119 319.0
DYD1_k127_424898_9 transcriptional regulatory protein - GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0044424,GO:0044444,GO:0044464 - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001341 306.0
DYD1_k127_4337591_0 Glycosyl transferase, family 2 - - - 0.000000000000000000000000000000000000000000000000000347 197.0
DYD1_k127_4337591_1 Psort location CytoplasmicMembrane, score - - - 0.000000000000004633 88.0
DYD1_k127_4337591_2 Methyltransferase - - - 0.000000000005968 76.0
DYD1_k127_4359607_0 PFAM cell divisionFtsK SpoIIIE K03466 - - 8.252e-194 628.0
DYD1_k127_4359607_1 Transfers the N-acyl diglyceride group on what will become the N-terminal cysteine of membrane lipoproteins K13292 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000007127 284.0
DYD1_k127_4359607_2 PFAM RNA binding S1 domain protein K02945,K03527 - 1.17.7.4 0.00000000000000000000000000000000000000000000000000000000000000000000000000000008848 277.0
DYD1_k127_4359607_3 CDP-alcohol phosphatidyltransferase K00995 - 2.7.8.5 0.0000000000000000000000000000000000000000000000000000000000009118 216.0
DYD1_k127_4359607_4 N-terminal 7TM region of histidine kinase - - - 0.00000000000000000000000000000000000000000000000494 176.0
DYD1_k127_4359674_0 Catalyzes the attachment of glutamate to tRNA(Glu) in a two-step reaction glutamate is first activated by ATP to form Glu-AMP and then transferred to the acceptor end of tRNA(Glu) K01885 - 6.1.1.17 4.66e-203 642.0
DYD1_k127_4359674_1 Peptide chain release factor 2 directs the termination of translation in response to the peptide chain termination codons UGA and UAA K02836 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001334 400.0
DYD1_k127_4359674_2 Belongs to the ParA family K03609 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001592 373.0
DYD1_k127_4359674_3 Belongs to the SEDS family K05837 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001151 369.0
DYD1_k127_4359674_4 PFAM extracellular solute-binding protein, family 5 K02035 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000009415 259.0
DYD1_k127_4359674_5 Prevents the cell division inhibition by proteins MinC and MinD at internal division sites while permitting inhibition at polar sites. This ensures cell division at the proper site by restricting the formation of a division septum at the midpoint of the long axis of the cell K03608 - - 0.000000000000009145 76.0
DYD1_k127_4359674_6 P-P-bond-hydrolysis-driven protein transmembrane transporter activity K03075 GO:0003674,GO:0005215,GO:0005575,GO:0005623,GO:0005886,GO:0006605,GO:0006612,GO:0006613,GO:0006614,GO:0006616,GO:0006810,GO:0006886,GO:0008104,GO:0008150,GO:0008320,GO:0008565,GO:0009987,GO:0015031,GO:0015833,GO:0016020,GO:0016043,GO:0022857,GO:0022884,GO:0031522,GO:0032978,GO:0032991,GO:0033036,GO:0033365,GO:0034613,GO:0042886,GO:0042887,GO:0043952,GO:0044464,GO:0045047,GO:0045184,GO:0046907,GO:0051179,GO:0051205,GO:0051234,GO:0051641,GO:0051649,GO:0055085,GO:0061024,GO:0065002,GO:0070727,GO:0070972,GO:0071702,GO:0071705,GO:0071806,GO:0071840,GO:0071944,GO:0072594,GO:0072599,GO:0072657,GO:0090150,GO:1904680 - 0.000000001551 61.0
DYD1_k127_4392194_0 that it carries out the mismatch recognition step. This protein has a weak ATPase activity K03555 GO:0003674,GO:0003676,GO:0003677,GO:0003684,GO:0003690,GO:0003824,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0006139,GO:0006259,GO:0006281,GO:0006298,GO:0006725,GO:0006807,GO:0006950,GO:0006974,GO:0008094,GO:0008150,GO:0008152,GO:0009987,GO:0016462,GO:0016787,GO:0016817,GO:0016818,GO:0016887,GO:0017111,GO:0030983,GO:0032300,GO:0032991,GO:0033554,GO:0034641,GO:0042623,GO:0043170,GO:0044237,GO:0044238,GO:0044260,GO:0044424,GO:0044464,GO:0046483,GO:0050896,GO:0051716,GO:0071704,GO:0090304,GO:0097159,GO:1901360,GO:1901363,GO:1990391 - 0.0 1094.0
DYD1_k127_4392194_1 Bacterial extracellular solute-binding proteins, family 5 Middle K02035 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001742 336.0
DYD1_k127_4392194_2 ABC transporter permease K02033 - - 0.00000000000000000000000000000000000000000000000002081 196.0
DYD1_k127_4392194_3 Catalyzes the deamination of 5-methylthioadenosine and S-adenosyl-L-homocysteine into 5-methylthioinosine and S-inosyl-L- homocysteine, respectively. Is also able to deaminate adenosine K05873,K12960 - 3.5.4.28,3.5.4.31,4.6.1.1 0.000000000001938 68.0
DYD1_k127_4392194_4 Binding-protein-dependent transport system inner membrane component K02034 - - 0.00004851 50.0
DYD1_k127_4401570_0 Catalyzes the folate-dependent formation of 5-methyl- uridine at position 54 (M-5-U54) in all tRNAs K04094 - 2.1.1.74 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009584 576.0
DYD1_k127_4401570_1 GTPase that associates with the 50S ribosomal subunit and may have a role during protein synthesis or ribosome biogenesis K03665 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000902 455.0
DYD1_k127_4401570_2 TIGRFAM RNA polymerase sigma-54 factor, RpoN K03092 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001582 423.0
DYD1_k127_4401570_3 Peptidase M28 - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000002309 282.0
DYD1_k127_4401570_4 His Kinase A (phosphoacceptor) domain - - - 0.0000000000000000000000000000000000000001864 168.0
DYD1_k127_4422186_0 PFAM cell divisionFtsK SpoIIIE K03466 - - 1.415e-198 646.0
DYD1_k127_4422186_1 ATPases associated with a variety of cellular activities K02056 - 3.6.3.17 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005319 552.0
DYD1_k127_4422186_10 Helix-turn-helix - - - 0.00000000000000000000000000000000000000000002328 169.0
DYD1_k127_4422186_11 signal-transduction protein containing cAMP-binding and CBS domains - - - 0.00000000000000000000000000000000000000000003535 184.0
DYD1_k127_4422186_12 heme a metabolic process K02257,K02259 - 2.5.1.141 0.000000000000000000000000000000000108 148.0
DYD1_k127_4422186_13 Cytochrome c K03611 - - 0.0000000000000000000000002123 121.0
DYD1_k127_4422186_2 argininosuccinate lyase K01755 GO:0003674,GO:0003824,GO:0004056,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006082,GO:0006520,GO:0006525,GO:0006526,GO:0006591,GO:0006807,GO:0008150,GO:0008152,GO:0008652,GO:0009058,GO:0009064,GO:0009084,GO:0009987,GO:0016053,GO:0016829,GO:0016840,GO:0016842,GO:0019752,GO:0042450,GO:0043436,GO:0044237,GO:0044238,GO:0044249,GO:0044281,GO:0044283,GO:0044424,GO:0044464,GO:0046394,GO:0071704,GO:1901564,GO:1901566,GO:1901576,GO:1901605,GO:1901607 4.3.2.1 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002064 476.0
DYD1_k127_4422186_3 Peptidase_C39 like family - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005592 402.0
DYD1_k127_4422186_4 PFAM basic membrane lipoprotein K07335 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003825 335.0
DYD1_k127_4422186_5 Belongs to the binding-protein-dependent transport system permease family K02057 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000238 330.0
DYD1_k127_4422186_6 Belongs to the binding-protein-dependent transport system permease family K02057 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000002309 289.0
DYD1_k127_4422186_7 Involved in peptidoglycan biosynthesis. Transports lipid-linked peptidoglycan precursors from the inner to the outer leaflet of the cytoplasmic membrane K03980 - - 0.000000000000000000000000000000000000000000000000000000000000000000000002861 264.0
DYD1_k127_4422186_8 LysM domain - - - 0.00000000000000000000000000000000000000000000005248 181.0
DYD1_k127_4422186_9 UbiA prenyltransferase family K02257 - 2.5.1.141 0.0000000000000000000000000000000000000000000003297 179.0
DYD1_k127_4441802_0 PFAM carbohydrate kinase K00854 - 2.7.1.17 3.389e-223 701.0
DYD1_k127_4441802_1 Glycosyl hydrolases family 15 - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001539 339.0
DYD1_k127_4441802_2 ROK family - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000001929 306.0
DYD1_k127_4441802_3 Bacterial extracellular solute-binding protein K02027 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000001547 306.0
DYD1_k127_4441802_4 ABC transporter (Permease) - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000007407 283.0
DYD1_k127_4441802_5 Glycosyl hydrolase family 66 K05988 - 3.2.1.11 0.0000000000000000000000000000000000000000000000000000000000000000000000000000122 279.0
DYD1_k127_4441802_6 transmembrane transport K02025,K05814,K10109,K10118,K15771,K17242,K17245 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000001647 273.0
DYD1_k127_4441802_7 transferase activity, transferring acyl groups other than amino-acyl groups - - - 0.00000000000000000000000000000000000000000000000000000007887 207.0
DYD1_k127_4441802_8 SnoaL-like polyketide cyclase - - - 0.0000000000000000001315 94.0
DYD1_k127_4441802_9 PIN domain - - - 0.0000000000001936 76.0
DYD1_k127_4477983_0 Malic enzyme, NAD binding domain K00027,K00029 - 1.1.1.38,1.1.1.40 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002545 590.0
DYD1_k127_4477983_1 PFAM ferredoxin - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001226 539.0
DYD1_k127_4477983_2 PFAM Cobyrinic acid ac-diamide synthase K07321 - - 0.0000000000000000000000000000000000000000000000000000000000000000000001007 247.0
DYD1_k127_4477983_3 Pterin binding enzyme K00548,K15023 - 2.1.1.13,2.1.1.258 0.00000000000000000000000000000000000000000000000000000000001273 218.0
DYD1_k127_4477983_4 Belongs to the class-II pyridine nucleotide-disulfide oxidoreductase family K03387 - - 0.00000000000000000000000000000000000000000000000000000001929 208.0
DYD1_k127_4477983_5 serine threonine protein kinase - - - 0.00000000000000000009854 94.0
DYD1_k127_4563274_0 Apoptosis-inducing factor, mitochondrion-associated, C-term - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002648 441.0
DYD1_k127_4563274_1 GyrI-like small molecule binding domain - - - 0.000000000000000000000000000000000000000000000000001886 192.0
DYD1_k127_4563274_2 Belongs to the bacterial solute-binding protein 9 family K02077,K09818 - - 0.0000000000000000000000000000000000000000004633 176.0
DYD1_k127_4563274_3 Transcriptional regulator PadR-like family - - - 0.00000000000000000000000000000000006494 140.0
DYD1_k127_4566410_0 PFAM glycosyl transferase group 1 - - - 1.382e-256 808.0
DYD1_k127_4566410_1 Tetratricopeptide TPR_2 repeat protein - - - 6.009e-211 709.0
DYD1_k127_4566410_2 oligosaccharyl transferase activity K07151 - 2.4.99.18 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001179 458.0
DYD1_k127_4566410_3 FtsJ-like methyltransferase K06442 - 2.1.1.226,2.1.1.227 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000005757 293.0
DYD1_k127_456897_0 A type II topoisomerase that negatively supercoils closed circular double-stranded (ds) DNA in an ATP-dependent manner to modulate DNA topology and maintain chromosomes in an underwound state. Negative supercoiling favors strand separation, and DNA replication, transcription, recombination and repair, all of which involve strand separation. Also able to catalyze the interconversion of other topological isomers of dsDNA rings, including catenanes and knotted rings. Type II topoisomerases break and join 2 DNA strands simultaneously in an ATP-dependent manner K02469 - 5.99.1.3 3.595e-317 986.0
DYD1_k127_456897_1 HD domain K07814 - - 0.00000000000000000004177 94.0
DYD1_k127_456897_2 Response regulator receiver K02487,K03407,K06596 - 2.7.13.3 0.000000000000004637 88.0
DYD1_k127_456897_3 GGDEF domain - - - 0.00000001122 66.0
DYD1_k127_4574794_0 Catalyzes the attachment of alanine to tRNA(Ala) in a two-step reaction alanine is first activated by ATP to form Ala- AMP and then transferred to the acceptor end of tRNA(Ala). Also edits incorrectly charged Ser-tRNA(Ala) and Gly-tRNA(Ala) via its editing domain K01872 GO:0003674,GO:0003824,GO:0004812,GO:0004813,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006082,GO:0006139,GO:0006396,GO:0006399,GO:0006400,GO:0006412,GO:0006418,GO:0006419,GO:0006518,GO:0006520,GO:0006725,GO:0006807,GO:0008033,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009451,GO:0009987,GO:0010467,GO:0016070,GO:0016597,GO:0016874,GO:0016875,GO:0019538,GO:0019752,GO:0031406,GO:0034470,GO:0034641,GO:0034645,GO:0034660,GO:0036094,GO:0043038,GO:0043039,GO:0043043,GO:0043167,GO:0043168,GO:0043170,GO:0043177,GO:0043412,GO:0043436,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044281,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0071704,GO:0090304,GO:0140098,GO:0140101,GO:1901360,GO:1901564,GO:1901566,GO:1901576 6.1.1.7 0.0 1052.0
DYD1_k127_4574794_1 FtsK/SpoIIIE family K03466 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002512 617.0
DYD1_k127_4574794_2 Baseplate J-like protein K01218 - 3.2.1.78 0.000000000000000000000000000000000002097 154.0
DYD1_k127_4574794_3 Serine/threonine phosphatases, family 2C, catalytic domain K20074 - 3.1.3.16 0.0000000000000000000000000004125 131.0
DYD1_k127_4574794_4 Protein tyrosine kinase K12132 - 2.7.11.1 0.000000000000000000000000008871 122.0
DYD1_k127_4574794_5 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase - - - 0.00000000000000000000004336 103.0
DYD1_k127_4574794_6 cheY-homologous receiver domain - - - 0.0000000000000000001182 93.0
DYD1_k127_4574794_7 PFAM Forkhead-associated protein - - - 0.000000000131 70.0
DYD1_k127_4574794_8 histone H2A K63-linked ubiquitination K00925,K08884,K11894 - 2.7.11.1,2.7.2.1 0.0001126 55.0
DYD1_k127_4574794_9 Belongs to the WXG100 family - - - 0.000302 48.0
DYD1_k127_4581655_0 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000002368 293.0
DYD1_k127_4581655_1 tetratricopeptide repeat - - - 0.0000000000000000007537 103.0
DYD1_k127_4581655_2 PhoQ Sensor - - - 0.0000000000007296 83.0
DYD1_k127_4581655_3 sh3 domain protein - - - 0.00003176 53.0
DYD1_k127_4613732_0 Protein of unknown function (DUF2652) - - - 0.000000000000000000000000000000000000000000000000000000000005195 224.0
DYD1_k127_4613732_1 Toxic component of a toxin-antitoxin (TA) module. An RNase K00640,K07062 - 2.3.1.30 0.000000000000000000000000000000000001782 142.0
DYD1_k127_4613732_2 Protein of unknown function (DUF4013) - - - 0.000000000000000000000000000000000002862 146.0
DYD1_k127_4613732_3 Domain of unknown function (DUF4347) - - - 0.0000000000000000000000000000005557 142.0
DYD1_k127_4613732_4 Lamin Tail Domain - - - 0.00000000000000000000008435 115.0
DYD1_k127_4613732_5 toxin-antitoxin pair type II binding - - - 0.0000000000000000004564 90.0
DYD1_k127_4613732_6 - - - - 0.000000000001015 82.0
DYD1_k127_4613732_7 Putative Flp pilus-assembly TadE/G-like - - - 0.0005643 53.0
DYD1_k127_4656402_0 Catalyzes the transfer of a two-carbon ketol group from a ketose donor to an aldose acceptor, via a covalent intermediate with the cofactor thiamine pyrophosphate K00615 - 2.2.1.1 7.768e-275 862.0
DYD1_k127_4656402_1 Belongs to the GPI family K01810,K13810 - 2.2.1.2,5.3.1.9 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003387 518.0
DYD1_k127_4656402_10 2-amino-4-hydroxy-6-hydroxymethyldihydropteridine pyrophosphokinase K00950 - 2.7.6.3 0.000000000000000000000000009726 118.0
DYD1_k127_4656402_2 Belongs to the binding-protein-dependent transport system permease family K01997,K01999 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006079 376.0
DYD1_k127_4656402_3 Belongs to the binding-protein-dependent transport system permease family K01998 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001069 352.0
DYD1_k127_4656402_4 FAD dependent oxidoreductase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002455 350.0
DYD1_k127_4656402_5 Branched-chain amino acid ATP-binding cassette transporter K01995 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001069 328.0
DYD1_k127_4656402_6 ABC transporter K01996 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002414 304.0
DYD1_k127_4656402_7 PFAM GTP cyclohydrolase I K01495 - 3.5.4.16 0.0000000000000000000000000000000000000000000000000000000000000000000000000000006005 273.0
DYD1_k127_4656402_8 Enoyl-(Acyl carrier protein) reductase K03793 - 1.5.1.33 0.00000000000000000000000000000000000000000006296 171.0
DYD1_k127_4656402_9 Catalyzes the conversion of 7,8-dihydroneopterin to 6- hydroxymethyl-7,8-dihydropterin K01633,K07589 GO:0003674,GO:0003824,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006082,GO:0006575,GO:0006725,GO:0006732,GO:0006760,GO:0006807,GO:0008150,GO:0008152,GO:0008719,GO:0009987,GO:0016853,GO:0019752,GO:0034641,GO:0042558,GO:0043436,GO:0043603,GO:0044237,GO:0044281,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0051186,GO:0071704,GO:1901360,GO:1901564 1.13.11.81,4.1.2.25,5.1.99.7,5.1.99.8 0.00000000000000000000000000000001937 132.0
DYD1_k127_4662745_0 TIGRFAM FeS assembly protein SufB K07033,K09014 - - 2.45e-252 783.0
DYD1_k127_4662745_1 TIGRFAM FeS assembly protein SufD K09015 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000145 499.0
DYD1_k127_4662745_2 PFAM ABC transporter related K09013 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001435 381.0
DYD1_k127_4662745_3 TIGRFAM RNA polymerase sigma factor, sigma-70 family K03088 - - 0.0000000000000000000000000000000000000000000000000000001194 202.0
DYD1_k127_4662745_4 PFAM regulatory protein, ArsR - - - 0.000000000000000000000000000000000000001447 154.0
DYD1_k127_4662745_5 Pfam:DUF59 - - - 0.0000000000000000000000000000001503 126.0
DYD1_k127_4662745_6 PFAM Exonuclease, RNase T and DNA polymerase III K02342,K03722 - 2.7.7.7,3.6.4.12 0.000000000000000000001663 96.0
DYD1_k127_4675857_0 PFAM cytoplasmic peptidoglycan synthetase domain protein K11754 - 6.3.2.12,6.3.2.17 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004285 511.0
DYD1_k127_4675857_1 Bacterial periplasmic substrate-binding proteins K02030 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000004981 294.0
DYD1_k127_4675857_2 organic phosphonate transport K02044 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000108 273.0
DYD1_k127_4675857_3 Binding-protein-dependent transport system inner membrane component K02029 - - 0.000000000000000000000000000000000000000000000000000000000000000000001879 247.0
DYD1_k127_4675857_4 organic phosphonate transport K02044 - - 0.00000000000000000001082 98.0
DYD1_k127_4695699_0 Ornithine cyclodeaminase/mu-crystallin family K01750,K19244 - 1.4.1.1,4.3.1.12 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001017 384.0
DYD1_k127_4695699_1 Histidine kinase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004581 398.0
DYD1_k127_4695699_2 Catalyzes the decarboxylation of four acetate groups of uroporphyrinogen-III to yield coproporphyrinogen-III K01599 - 4.1.1.37 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005185 310.0
DYD1_k127_4695699_3 PFAM membrane-flanked domain - - - 0.0000000000000000000000000000000000000000000000000003723 192.0
DYD1_k127_4695699_4 TIGRFAM chromate transporter, chromate ion transporter (CHR) family K07240 - - 0.000000000000000000000000000000003357 132.0
DYD1_k127_4713730_0 Produces ATP from ADP in the presence of a proton gradient across the membrane. The catalytic sites are hosted primarily by the beta subunits K02112 - 3.6.3.14 3.6e-233 739.0
DYD1_k127_4713730_1 An essential GTPase which binds GTP, GDP and possibly (p)ppGpp with moderate affinity, with high nucleotide exchange rates and a fairly low GTP hydrolysis rate. Plays a role in control of the cell cycle, stress response, ribosome biogenesis and in those bacteria that undergo differentiation, in morphogenesis control K03979 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008353 368.0
DYD1_k127_4713730_10 Destroys radicals which are normally produced within the cells and which are toxic to biological systems K04564 - 1.15.1.1 0.0000000000003951 71.0
DYD1_k127_4713730_2 Cell division protein FtsA K03569 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001157 340.0
DYD1_k127_4713730_3 Modulates transcription in response to changes in cellular NADH NAD( ) redox state K01926 - - 0.00000000000000000000000000000000000000000000000000000000000000000000001462 251.0
DYD1_k127_4713730_4 EamA-like transporter family - - - 0.000000000000000000000000000000000000000000000000000000000000411 222.0
DYD1_k127_4713730_5 PFAM major facilitator superfamily MFS_1 K08223 - - 0.000000000000000000000000000000000000000000000000002573 204.0
DYD1_k127_4713730_6 Catalyzes the reversible adenylation of nicotinate mononucleotide (NaMN) to nicotinic acid adenine dinucleotide (NaAD) K00969 - 2.7.7.18 0.00000000000000000000000000000000000000000000000001429 192.0
DYD1_k127_4713730_7 Produces ATP from ADP in the presence of a proton gradient across the membrane. The gamma chain is believed to be important in regulating ATPase activity and the flow of protons through the CF(0) complex K02115 - - 0.000000000000000000000000000000000000000000006401 169.0
DYD1_k127_4713730_8 Produces ATP from ADP in the presence of a proton gradient across the membrane K02114 GO:0005575,GO:0005622,GO:0005623,GO:0006139,GO:0006163,GO:0006164,GO:0006725,GO:0006753,GO:0006754,GO:0006793,GO:0006796,GO:0006807,GO:0006810,GO:0006811,GO:0006812,GO:0008150,GO:0008152,GO:0009058,GO:0009117,GO:0009123,GO:0009124,GO:0009126,GO:0009127,GO:0009141,GO:0009142,GO:0009144,GO:0009145,GO:0009150,GO:0009152,GO:0009156,GO:0009161,GO:0009165,GO:0009167,GO:0009168,GO:0009199,GO:0009201,GO:0009205,GO:0009206,GO:0009259,GO:0009260,GO:0009987,GO:0015672,GO:0015985,GO:0015986,GO:0016020,GO:0016469,GO:0017144,GO:0018130,GO:0019438,GO:0019637,GO:0019693,GO:0032991,GO:0033178,GO:0034220,GO:0034641,GO:0034654,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0044424,GO:0044425,GO:0044464,GO:0045259,GO:0045261,GO:0046034,GO:0046390,GO:0046483,GO:0051179,GO:0051234,GO:0055085,GO:0055086,GO:0071704,GO:0072521,GO:0072522,GO:0090407,GO:0098655,GO:0098660,GO:0098662,GO:0098796,GO:1901135,GO:1901137,GO:1901293,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576,GO:1902600 - 0.00000000000000000000000000000000000000000001256 169.0
DYD1_k127_4713730_9 An essential GTPase which binds GTP, GDP and possibly (p)ppGpp with moderate affinity, with high nucleotide exchange rates and a fairly low GTP hydrolysis rate. Plays a role in control of the cell cycle, stress response, ribosome biogenesis and in those bacteria that undergo differentiation, in morphogenesis control K03979 - - 0.000000000000000000000001287 104.0
DYD1_k127_4720023_0 Belongs to the RimK family K05827 - 6.3.2.43 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004553 416.0
DYD1_k127_4720023_1 Belongs to the NAGSA dehydrogenase family. Type 1 subfamily K00145,K05829 - 1.2.1.38 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000002869 287.0
DYD1_k127_4720023_2 PFAM transcriptional regulator TrmB - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000001566 273.0
DYD1_k127_4720023_3 - - - - 0.00000000000000000000000000000000000000000000000000000000000000000000006858 261.0
DYD1_k127_4720023_4 ZIP Zinc transporter - - - 0.000000000000000000000000000000000000000000000007295 183.0
DYD1_k127_4720023_5 Belongs to the FPG family K10563 - 3.2.2.23,4.2.99.18 0.0000000000000000000000000000000008592 143.0
DYD1_k127_4720023_6 Calcineurin-like phosphoesterase superfamily domain - - - 0.000000000000000002269 89.0
DYD1_k127_4720023_7 TIGRFAM lysine biosynthesis protein LysW K05826 - - 0.000000000000006731 79.0
DYD1_k127_4763917_0 Major facilitator Superfamily - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000006405 308.0
DYD1_k127_4763917_1 protein methyltransferase activity - - - 0.0000000000000000000000000000000000000000000000000000000000000000000001158 254.0
DYD1_k127_4763917_2 ATPase-coupled phosphate ion transmembrane transporter activity K02036,K06857 - 3.6.3.27,3.6.3.55 0.000000000000000000000000000000000000000000000000000000000000000000003245 251.0
DYD1_k127_4763917_3 PFAM FAD dependent oxidoreductase K00285 - 1.4.5.1 0.0000000000000000000000000000000000000000000000000000000000000002044 240.0
DYD1_k127_4763917_4 Binding-protein-dependent transport system inner membrane component K05773 - - 0.00000000000000000000000000000000000000000000000000000000000001474 220.0
DYD1_k127_4763917_5 - - - - 0.000000000000000013 95.0
DYD1_k127_478330_0 PFAM ABC transporter related K10112 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006856 563.0
DYD1_k127_478330_1 Spermine/spermidine synthase domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003278 486.0
DYD1_k127_478330_2 Belongs to the glyceraldehyde-3-phosphate dehydrogenase family K00134 - 1.2.1.12 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001051 475.0
DYD1_k127_478330_3 Belongs to the phosphoglycerate kinase family K00927,K01803 GO:0001871,GO:0002020,GO:0003674,GO:0003824,GO:0004618,GO:0005488,GO:0005515,GO:0005575,GO:0005576,GO:0005618,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005886,GO:0005975,GO:0006082,GO:0006090,GO:0006091,GO:0006096,GO:0006139,GO:0006163,GO:0006164,GO:0006165,GO:0006725,GO:0006732,GO:0006733,GO:0006753,GO:0006754,GO:0006757,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0009056,GO:0009058,GO:0009108,GO:0009117,GO:0009123,GO:0009124,GO:0009126,GO:0009127,GO:0009132,GO:0009135,GO:0009141,GO:0009142,GO:0009144,GO:0009145,GO:0009150,GO:0009152,GO:0009156,GO:0009161,GO:0009165,GO:0009166,GO:0009167,GO:0009168,GO:0009179,GO:0009185,GO:0009199,GO:0009201,GO:0009205,GO:0009206,GO:0009259,GO:0009260,GO:0009893,GO:0009986,GO:0009987,GO:0010468,GO:0010604,GO:0010628,GO:0010755,GO:0010756,GO:0010954,GO:0016020,GO:0016052,GO:0016053,GO:0016301,GO:0016310,GO:0016740,GO:0016772,GO:0016774,GO:0017144,GO:0018130,GO:0019222,GO:0019359,GO:0019362,GO:0019363,GO:0019438,GO:0019439,GO:0019637,GO:0019693,GO:0019752,GO:0019899,GO:0030162,GO:0030193,GO:0030195,GO:0030246,GO:0030247,GO:0030312,GO:0031323,GO:0031325,GO:0032101,GO:0032102,GO:0032268,GO:0032270,GO:0032787,GO:0034404,GO:0034641,GO:0034654,GO:0034655,GO:0040007,GO:0042866,GO:0043436,GO:0043532,GO:0044237,GO:0044238,GO:0044248,GO:0044249,GO:0044270,GO:0044271,GO:0044281,GO:0044283,GO:0044424,GO:0044444,GO:0044464,GO:0045862,GO:0046031,GO:0046034,GO:0046390,GO:0046394,GO:0046434,GO:0046483,GO:0046496,GO:0046700,GO:0046939,GO:0048518,GO:0048519,GO:0048522,GO:0048583,GO:0048585,GO:0050789,GO:0050794,GO:0050818,GO:0050819,GO:0050878,GO:0051171,GO:0051173,GO:0051186,GO:0051188,GO:0051239,GO:0051241,GO:0051246,GO:0051247,GO:0051917,GO:0051919,GO:0055086,GO:0060255,GO:0061041,GO:0061045,GO:0065007,GO:0065008,GO:0070613,GO:0071704,GO:0071944,GO:0072330,GO:0072521,GO:0072522,GO:0072524,GO:0072525,GO:0080090,GO:0080134,GO:0090407,GO:1900046,GO:1900047,GO:1901135,GO:1901137,GO:1901292,GO:1901293,GO:1901360,GO:1901361,GO:1901362,GO:1901564,GO:1901566,GO:1901575,GO:1901576,GO:1903034,GO:1903035,GO:1903317,GO:1903319,GO:2001065 2.7.2.3,5.3.1.1 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002661 470.0
DYD1_k127_478330_4 phosphoglycerate mutase K15635 - 5.4.2.12 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007612 447.0
DYD1_k127_478330_5 Required for morphogenesis under gluconeogenic growth conditions - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001694 410.0
DYD1_k127_478330_6 Serine threonine protein kinase K08884,K12132 - 2.7.11.1 0.0000000000000000000000000000000000000000000000000000000000000000004332 240.0
DYD1_k127_478330_7 Protein of unknown function (DUF1461) - - - 0.00000000000000000000000000000000000001896 153.0
DYD1_k127_4787868_0 PFAM cell divisionFtsK SpoIIIE K03466 - - 0.0 1163.0
DYD1_k127_4787868_1 PFAM acetyl-CoA hydrolase transferase K01067 - 3.1.2.1 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002629 527.0
DYD1_k127_4787868_2 Belongs to the pyruvate kinase family K00873 - 2.7.1.40 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002502 428.0
DYD1_k127_4787868_3 Belongs to the AlaDH PNT family K00259 - 1.4.1.1 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000001058 298.0
DYD1_k127_4787868_4 protein kinase activity - - - 0.000000000000000000000000000000000000000001373 170.0
DYD1_k127_4787868_5 protein secretion by the type VII secretion system - - - 0.000000003995 61.0
DYD1_k127_4799752_0 ABC-type spermidine putrescine transport system, permease component I K11071 - - 0.0000000000000000000000000000000000000000000000000000000000000000004894 239.0
DYD1_k127_4799752_1 Bacterial extracellular solute-binding protein K11069 - - 0.0000000000000000000000000000000000000000000000000000000000000001517 234.0
DYD1_k127_4799752_2 Elongator protein 3, MiaB family, Radical SAM - - - 0.0000000000000000000000000000000000000000000001314 182.0
DYD1_k127_4804001_0 ATPase activity K13527 - - 4.056e-195 636.0
DYD1_k127_4804001_1 carboxylic ester hydrolase activity - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000003334 271.0
DYD1_k127_4804001_2 transcriptional regulator - - - 0.0000000000000000000000000000000000000000000002276 181.0
DYD1_k127_4809888_0 Aldehyde ferredoxin oxidoreductase K03738 - 1.2.7.5 1.155e-194 625.0
DYD1_k127_4809888_1 Aldehyde dehydrogenase family - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001033 531.0
DYD1_k127_4809888_2 Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family K00823 - 2.6.1.19 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001173 514.0
DYD1_k127_4809888_3 Transaldolase is important for the balance of metabolites in the pentose-phosphate pathway K00616 - 2.2.1.2 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001564 508.0
DYD1_k127_4809888_4 Psort location Cytoplasmic, score 8.87 K01845 - 5.4.3.8 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004783 400.0
DYD1_k127_4809888_5 KduI/IolB family K03337 - 5.3.1.30 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005053 342.0
DYD1_k127_4809888_6 Belongs to the aldehyde dehydrogenase family - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000002671 268.0
DYD1_k127_4809888_7 Saccharopine dehydrogenase C-terminal domain K00290 - 1.5.1.7 0.00000000000000000000000000000000000000000000000000000000000018 227.0
DYD1_k127_4809888_8 Saccharopine dehydrogenase C-terminal domain - - - 0.00000000000000000000000000000000000000000000000005171 192.0
DYD1_k127_4839024_0 Arginyl-tRNA synthetase K01887 GO:0003674,GO:0003824,GO:0004812,GO:0004814,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006082,GO:0006139,GO:0006399,GO:0006412,GO:0006418,GO:0006420,GO:0006518,GO:0006520,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0016070,GO:0016874,GO:0016875,GO:0019538,GO:0019752,GO:0034641,GO:0034645,GO:0034660,GO:0043038,GO:0043039,GO:0043043,GO:0043170,GO:0043436,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044281,GO:0044424,GO:0044464,GO:0046483,GO:0071704,GO:0090304,GO:0140098,GO:0140101,GO:1901360,GO:1901564,GO:1901566,GO:1901576 6.1.1.19 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001182 566.0
DYD1_k127_4839024_1 PFAM glycoside hydrolase, family 1 K05350 - 3.2.1.21 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001215 532.0
DYD1_k127_4839024_10 SIS domain K00820 - 2.6.1.16 0.00000000000000000000000000002314 131.0
DYD1_k127_4839024_11 IMS family HHH motif K02346 GO:0008150,GO:0009314,GO:0009411,GO:0009416,GO:0009628,GO:0009650,GO:0050896 2.7.7.7 0.0000000000000000002893 91.0
DYD1_k127_4839024_12 Binds directly to 16S ribosomal RNA K02968 - - 0.0000000000003203 74.0
DYD1_k127_4839024_13 Tetratricopeptide TPR_2 repeat protein - - - 0.000000000001495 81.0
DYD1_k127_4839024_2 Peptidoglycan-binding domain 1 protein - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001822 313.0
DYD1_k127_4839024_3 PFAM DNA methylase N-4 N-6 K00571,K07316 - 2.1.1.72 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000003968 309.0
DYD1_k127_4839024_4 Domain of unknown function (DUF348) - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000007916 310.0
DYD1_k127_4839024_5 peptidase dimerisation domain protein - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000003384 300.0
DYD1_k127_4839024_6 pfkB family carbohydrate kinase - - - 0.000000000000000000000000000000000000000000000000000000000000000000001745 247.0
DYD1_k127_4839024_8 phosphorelay signal transduction system - - - 0.0000000000000000000000000000000000000000000000000044 189.0
DYD1_k127_4839024_9 Specifically dimethylates two adjacent adenosines (A1518 and A1519) in the loop of a conserved hairpin near the 3'-end of 16S rRNA in the 30S particle. May play a critical role in biogenesis of 30S subunits K02528 - 2.1.1.182 0.00000000000000000000000000000000000008386 161.0
DYD1_k127_4843257_0 PFAM Aminotransferase class-V K00830 - 2.6.1.44,2.6.1.45,2.6.1.51 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002393 458.0
DYD1_k127_4843257_1 PFAM ABC transporter related K01990 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008897 347.0
DYD1_k127_4843257_10 ABC-2 family transporter protein K01992 - - 0.000108 54.0
DYD1_k127_4843257_2 Involved in the regulation of the intracellular balance of NAD and NADP, and is a key enzyme in the biosynthesis of NADP. Catalyzes specifically the phosphorylation on 2'-hydroxyl of the adenosine moiety of NAD to yield NADP K00858 - 2.7.1.23 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005779 311.0
DYD1_k127_4843257_3 May be involved in recombinational repair of damaged DNA K03631 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000866 312.0
DYD1_k127_4843257_4 PFAM Translin K07477 - - 0.0000000000000000000000000000000000000000000000000000001229 207.0
DYD1_k127_4843257_5 iron-sulfur cluster assembly K07400,K13628 - - 0.0000000000000000000000000000000000000000000000000005633 190.0
DYD1_k127_4843257_6 Plays an important role in DNA replication, recombination and repair. Binds to ssDNA and to an array of partner proteins to recruit them to their sites of action during DNA metabolism K03111 - - 0.000000000000000000000000000000000000000000003117 168.0
DYD1_k127_4843257_7 Nuclear protein SET K07117 - - 0.000000000000000000000000000000000000000000007073 168.0
DYD1_k127_4843257_8 Type IV pilus biogenesis stability protein PilW - - - 0.0000000000000000000000004638 117.0
DYD1_k127_4843257_9 Protein of unknown function (DUF3467) - - - 0.0000000000000001034 84.0
DYD1_k127_4901701_0 Transaldolase is important for the balance of metabolites in the pentose-phosphate pathway K13810 - 2.2.1.2,5.3.1.9 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001005 607.0
DYD1_k127_4901701_1 Catalyzes the oxidation of glucose 6-phosphate to 6- phosphogluconolactone K00036 - 1.1.1.363,1.1.1.49 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002331 542.0
DYD1_k127_4901701_2 DNA binding - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002747 458.0
DYD1_k127_4901701_3 TIGRFAM 6-phosphogluconate dehydrogenase (decarboxylating) K00033 - 1.1.1.343,1.1.1.44 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003343 404.0
DYD1_k127_4901701_4 Catalyzes the reversible conversion of ribose-5- phosphate to ribulose 5-phosphate K01807 - 5.3.1.6 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000621 291.0
DYD1_k127_4901701_5 Non-canonical ABC transporter that contains transmembrane domains (TMD), which form a pore in the membrane, and an ATP-binding domain (NBD), which is responsible for energy generation. Confers resistance against macrolides K02003 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000002131 271.0
DYD1_k127_4901701_6 Glucosamine-6-phosphate isomerases/6-phosphogluconolactonase K01057 - 3.1.1.31 0.00000000000000000000000000000000000000000000000000000000000000353 228.0
DYD1_k127_4901701_7 helix_turn_helix, Lux Regulon - - - 0.00000000000000000000000000000000000009328 158.0
DYD1_k127_4903775_0 ATP-dependent serine protease that mediates the selective degradation of mutant and abnormal proteins as well as certain short-lived regulatory proteins. Required for cellular homeostasis and for survival from DNA damage and developmental changes induced by stress. Degrades polypeptides processively to yield small peptide fragments that are 5 to 10 amino acids long. Binds to DNA in a double-stranded, site-specific manner K01338 - 3.4.21.53 0.0 1060.0
DYD1_k127_4903775_1 ATPase, P-type (transporting), HAD superfamily, subfamily IC K17686 - 3.6.3.54 9.438e-252 800.0
DYD1_k127_4903775_10 Pyridoxal 5'-phosphate (PLP)-binding protein, which is involved in PLP homeostasis K06997 - - 0.000000000000000000000000000000000000000000000000002204 197.0
DYD1_k127_4903775_11 Metallo-beta-lactamase superfamily K00784 - 3.1.26.11 0.00000000000000000000000000000000000000000001958 179.0
DYD1_k127_4903775_12 oligosaccharyl transferase activity - - - 0.0000000000000000000000000000000000003779 155.0
DYD1_k127_4903775_13 Zn-ribbon protein possibly nucleic acid-binding K07164 - - 0.00000000000000000000000000000000001516 149.0
DYD1_k127_4903775_14 Belongs to the UPF0235 family K09131 - - 0.000000000000000000000000000115 118.0
DYD1_k127_4903775_15 PFAM cyclic nucleotide-binding - - - 0.0000000000000000000000000002402 119.0
DYD1_k127_4903775_16 Metal-sensitive transcriptional repressor K21600 - - 0.000000000000000000000000002349 113.0
DYD1_k127_4903775_17 response regulator K03413,K07719 - - 0.0000000000000000000000000269 113.0
DYD1_k127_4903775_18 Belongs to the small heat shock protein (HSP20) family - - - 0.0000000000000000001818 95.0
DYD1_k127_4903775_19 integral membrane protein K02221 GO:0005575,GO:0005623,GO:0005886,GO:0016020,GO:0044464,GO:0071944 - 0.0000000000000002786 82.0
DYD1_k127_4903775_2 SMART phosphoesterase PHP domain protein - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006716 601.0
DYD1_k127_4903775_20 mercury ion transmembrane transporter activity K07213 - - 0.000000000000005662 77.0
DYD1_k127_4903775_21 NACHT domain - - - 0.0000000000006146 83.0
DYD1_k127_4903775_3 Stage II sporulation protein M - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000612 375.0
DYD1_k127_4903775_4 PFAM ABC transporter related K01990 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001889 322.0
DYD1_k127_4903775_5 Belongs to the multicopper oxidase YfiH RL5 family K05810 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000005542 265.0
DYD1_k127_4903775_6 Bacterial membrane protein, YfhO - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000007431 275.0
DYD1_k127_4903775_7 Predicted membrane protein (DUF2085) - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000001087 261.0
DYD1_k127_4903775_8 oligosaccharyl transferase activity - - - 0.000000000000000000000000000000000000000000000000000000001348 220.0
DYD1_k127_4903775_9 molybdenum cofactor - - - 0.000000000000000000000000000000000000000000000000000000009162 202.0
DYD1_k127_493698_0 4Fe-4S ferredoxin iron-sulfur binding domain protein K03388 - 1.8.7.3,1.8.98.4,1.8.98.5,1.8.98.6 0.0 1878.0
DYD1_k127_493698_1 Two component regulator propeller K00936 - 2.7.13.3 2.933e-217 710.0
DYD1_k127_493698_2 Methyl-viologen-reducing hydrogenase, delta subunit - - - 0.000000000004312 81.0
DYD1_k127_4942981_0 FAD linked oxidases, C-terminal domain - - - 8.779e-291 925.0
DYD1_k127_4942981_1 PFAM Citrate transporter - - - 1.07e-212 685.0
DYD1_k127_4942981_10 Dienelactone hydrolase family - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000003097 284.0
DYD1_k127_4942981_11 ferroxidase activity K03594 GO:0003674,GO:0003824,GO:0004322,GO:0005575,GO:0005576,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005886,GO:0006873,GO:0006875,GO:0006879,GO:0008150,GO:0008152,GO:0009987,GO:0010035,GO:0010038,GO:0010039,GO:0016020,GO:0016491,GO:0016722,GO:0016724,GO:0019725,GO:0030003,GO:0033212,GO:0033214,GO:0042221,GO:0042592,GO:0044424,GO:0044444,GO:0044464,GO:0046916,GO:0048878,GO:0050801,GO:0050896,GO:0055065,GO:0055072,GO:0055076,GO:0055080,GO:0055082,GO:0055114,GO:0065007,GO:0065008,GO:0071944,GO:0098771 1.16.3.1 0.000000000000000000000000000000000000000000000000000000000001224 214.0
DYD1_k127_4942981_12 PFAM Polysaccharide deacetylase - - - 0.0000000000000000000000000000000000000000000000000000000006895 214.0
DYD1_k127_4942981_13 Thioesterase superfamily - - - 0.00000000000000000000000000000000000000000000000000009066 192.0
DYD1_k127_4942981_14 Acyl-transferase - - - 0.000000000000000000000000000000000000000000000000002192 194.0
DYD1_k127_4942981_15 - - - - 0.000000000000000000000000000004843 131.0
DYD1_k127_4942981_16 SatD family (SatD) - - - 0.000000000000000000000000003202 119.0
DYD1_k127_4942981_17 branched-chain-amino-acid transaminase activity K02619 - 4.1.3.38 0.00000000000000007817 95.0
DYD1_k127_4942981_18 Protein of unknown function (DUF3307) - - - 0.00000000004198 72.0
DYD1_k127_4942981_19 PFAM L,D-transpeptidase catalytic domain - - - 0.000001185 61.0
DYD1_k127_4942981_2 Immune inhibitor A peptidase M6 - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002752 613.0
DYD1_k127_4942981_20 Lipopolysaccharide assembly protein A domain K08992 - - 0.0000168 51.0
DYD1_k127_4942981_3 Radical SAM domain protein K04070 - 1.97.1.4 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001692 437.0
DYD1_k127_4942981_4 Inactivates the type B streptogramin antibiotics by linearizing the lactone ring at the ester linkage, generating a free phenylglycine carboxylate and converting the threonyl moiety into 2-amino-butenoic acid K18235 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002674 428.0
DYD1_k127_4942981_5 PFAM major facilitator superfamily MFS_1 K08161 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001277 409.0
DYD1_k127_4942981_6 Belongs to the class-I aminoacyl-tRNA synthetase family K15526 - 6.3.1.13 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005514 408.0
DYD1_k127_4942981_7 Allows the formation of correctly charged Gln-tRNA(Gln) through the transamidation of misacylated Glu-tRNA(Gln) in organisms which lack glutaminyl-tRNA synthetase. The reaction takes place in the presence of glutamine and ATP through an activated gamma-phospho-Glu-tRNA(Gln) K19837 - 3.5.1.84 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000562 344.0
DYD1_k127_4942981_8 Peptidase family S49 K04773 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001951 321.0
DYD1_k127_4942981_9 Memo-like protein K06990 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000001684 293.0
DYD1_k127_495519_0 Cytochrome b/b6/petB K00412,K03888 - - 0.00000000000000000000000000000000000000000000000000000000000000000009645 237.0
DYD1_k127_495519_1 Response regulator receiver - - - 0.0000000000000000000000000000000000000000000000000000000000009118 216.0
DYD1_k127_495519_2 Catalyzes the reduction of nitrite to ammonia, consuming six electrons in the process - - - 0.000000000000000000000000000000000000000000000000000000002071 213.0
DYD1_k127_495519_3 Histidine kinase - - - 0.000000000000000000000000000000000000000009563 172.0
DYD1_k127_495519_4 Cytochrome c K17222 - - 0.00000000000000000000000000000000000002477 154.0
DYD1_k127_495519_5 - - - - 0.000000000000000000000000000000619 134.0
DYD1_k127_495519_6 Cytochrome b(C-terminal)/b6/petD K00412 - - 0.00000000000000000000000005307 125.0
DYD1_k127_495519_7 Cytochrome c K00406,K03889,K17222,K19713 GO:0003674,GO:0003824,GO:0005488,GO:0005506,GO:0005507,GO:0005515,GO:0005575,GO:0005623,GO:0006091,GO:0006464,GO:0006790,GO:0006807,GO:0008150,GO:0008152,GO:0009055,GO:0009987,GO:0016491,GO:0016667,GO:0016669,GO:0016740,GO:0016782,GO:0016783,GO:0018192,GO:0018193,GO:0018198,GO:0018307,GO:0019417,GO:0019538,GO:0020037,GO:0022900,GO:0036211,GO:0042597,GO:0043167,GO:0043169,GO:0043170,GO:0043412,GO:0044237,GO:0044238,GO:0044260,GO:0044267,GO:0044464,GO:0046872,GO:0046906,GO:0046914,GO:0046982,GO:0046983,GO:0048037,GO:0055114,GO:0071704,GO:0097159,GO:0098822,GO:1901363,GO:1901564 1.8.2.2 0.0000000000000002815 89.0
DYD1_k127_495519_8 Cytochrome c K00406,K03889 GO:0005575,GO:0005623,GO:0005886,GO:0005887,GO:0008150,GO:0016020,GO:0016021,GO:0031224,GO:0031226,GO:0040007,GO:0044425,GO:0044459,GO:0044464,GO:0071944 - 0.0000000000003602 83.0
DYD1_k127_495519_9 Protein of unknown function (DUF1549) - - - 0.0000001245 65.0
DYD1_k127_4985946_0 Belongs to the helicase family. UvrD subfamily K07465 - - 0.000000000000000000000000000000000000000000000000000000000006702 230.0
DYD1_k127_4985946_1 exonuclease activity K16899 - 3.6.4.12 0.0000000000000000000000000000001529 143.0
DYD1_k127_4985946_2 Polysaccharide deacetylase - - - 0.0000000000000000000007757 108.0
DYD1_k127_4985946_3 AAA domain - - - 0.0000000000002722 83.0
DYD1_k127_4985946_4 Calcineurin-like phosphoesterase superfamily domain K03547 - - 0.00000004654 64.0
DYD1_k127_4985946_5 Response regulator receiver domain - - - 0.0000006188 53.0
DYD1_k127_4991866_0 Catalyzes the transfer of a two-carbon ketol group from a ketose donor to an aldose acceptor, via a covalent intermediate with the cofactor thiamine pyrophosphate K00615 - 2.2.1.1 2.24e-216 700.0
DYD1_k127_4991866_1 Belongs to the aldehyde dehydrogenase family K00135 GO:0000166,GO:0001505,GO:0003674,GO:0003824,GO:0004777,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006082,GO:0006105,GO:0006520,GO:0006536,GO:0006538,GO:0006540,GO:0006553,GO:0006554,GO:0006807,GO:0008150,GO:0008152,GO:0009013,GO:0009056,GO:0009063,GO:0009064,GO:0009065,GO:0009066,GO:0009068,GO:0009448,GO:0009450,GO:0009987,GO:0016054,GO:0016491,GO:0016620,GO:0016903,GO:0017144,GO:0019477,GO:0019752,GO:0032787,GO:0036094,GO:0042133,GO:0042135,GO:0042737,GO:0043436,GO:0043648,GO:0043649,GO:0044237,GO:0044238,GO:0044248,GO:0044281,GO:0044282,GO:0044424,GO:0044464,GO:0046395,GO:0046440,GO:0047949,GO:0048037,GO:0050662,GO:0051287,GO:0055114,GO:0065007,GO:0065008,GO:0071704,GO:0072329,GO:0097159,GO:1901265,GO:1901363,GO:1901564,GO:1901565,GO:1901575,GO:1901605,GO:1901606 1.2.1.16,1.2.1.20,1.2.1.79 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005795 403.0
DYD1_k127_4991866_2 NAD binding K00058 - 1.1.1.399,1.1.1.95 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002312 342.0
DYD1_k127_4991866_3 PFAM Xylose isomerase-like TIM barrel - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000002631 291.0
DYD1_k127_4991866_4 alcohol dehydrogenase K00004 - 1.1.1.303,1.1.1.4 0.00000000000000000000000000000000000000000000000000000000001121 225.0
DYD1_k127_4991866_5 Cobalamin biosynthesis protein CobT VWA domain K09883 - 6.6.1.2 0.00003019 56.0
DYD1_k127_5009507_0 carbohydrate transport K02027 - - 1.411e-200 635.0
DYD1_k127_5009507_1 PFAM metal-dependent phosphohydrolase, HD sub domain K06950 - - 0.00000000000000000000000000000000000000000000000000000000000000000001623 239.0
DYD1_k127_5009507_2 Belongs to the binding-protein-dependent transport system permease family K02057 - - 0.0000000000000000000000000000000000000000000000000001959 198.0
DYD1_k127_5009507_3 uridine phosphorylase activity K00757,K01241,K03784 GO:0003674,GO:0003824,GO:0004850,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006139,GO:0006213,GO:0006218,GO:0006725,GO:0006807,GO:0006950,GO:0006974,GO:0008150,GO:0008152,GO:0009056,GO:0009116,GO:0009119,GO:0009164,GO:0009987,GO:0016043,GO:0016740,GO:0016757,GO:0016763,GO:0019439,GO:0022607,GO:0030955,GO:0031420,GO:0033554,GO:0034214,GO:0034641,GO:0034655,GO:0034656,GO:0042454,GO:0042802,GO:0043167,GO:0043169,GO:0043933,GO:0044085,GO:0044237,GO:0044238,GO:0044248,GO:0044270,GO:0044281,GO:0044282,GO:0044424,GO:0044444,GO:0044464,GO:0046108,GO:0046131,GO:0046133,GO:0046135,GO:0046483,GO:0046700,GO:0046872,GO:0050896,GO:0051259,GO:0051716,GO:0055086,GO:0065003,GO:0071704,GO:0071840,GO:0072527,GO:0072529,GO:1901135,GO:1901136,GO:1901360,GO:1901361,GO:1901564,GO:1901565,GO:1901575,GO:1901657,GO:1901658 2.4.2.1,2.4.2.3,3.2.2.4 0.0003215 45.0
DYD1_k127_5041530_0 In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity K02335 GO:0003674,GO:0003676,GO:0003677,GO:0003824,GO:0003887,GO:0004518,GO:0004527,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006139,GO:0006259,GO:0006260,GO:0006261,GO:0006281,GO:0006284,GO:0006725,GO:0006807,GO:0006950,GO:0006974,GO:0008150,GO:0008152,GO:0008408,GO:0008409,GO:0009058,GO:0009059,GO:0009987,GO:0016740,GO:0016772,GO:0016779,GO:0016787,GO:0016788,GO:0018130,GO:0019438,GO:0033554,GO:0034061,GO:0034641,GO:0034645,GO:0034654,GO:0043170,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044271,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0050896,GO:0051716,GO:0071704,GO:0071897,GO:0090304,GO:0090305,GO:0097159,GO:0140097,GO:1901360,GO:1901362,GO:1901363,GO:1901576 2.7.7.7 4.602e-213 708.0
DYD1_k127_5041530_1 Catalyzes the methylthiolation of N6- (dimethylallyl)adenosine (i(6)A), leading to the formation of 2- methylthio-N6-(dimethylallyl)adenosine (ms(2)i(6)A) at position 37 in tRNAs that read codons beginning with uridine K06168 - 2.8.4.3 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006954 577.0
DYD1_k127_5041530_11 Preprotein translocase SecG subunit K03075 - - 0.0007365 43.0
DYD1_k127_5041530_2 GTPase that plays an essential role in the late steps of ribosome biogenesis K03977 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006001 537.0
DYD1_k127_5041530_3 PFAM TPR repeat-containing protein - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006663 493.0
DYD1_k127_5041530_4 Ig-like domain from next to BRCA1 gene - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002904 330.0
DYD1_k127_5041530_5 Catalyzes the condensation of 2 ATP molecules into cyclic di-AMP (c-di-AMP), a second messenger used to regulate differing processes in different bacteria K18672 - 2.7.7.85 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000005974 282.0
DYD1_k127_5041530_6 Involved in the gluconeogenesis. Catalyzes stereospecifically the conversion of dihydroxyacetone phosphate (DHAP) to D-glyceraldehyde-3-phosphate (G3P) K01803 GO:0003674,GO:0003824,GO:0004807,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005975,GO:0005996,GO:0006006,GO:0006066,GO:0006071,GO:0006081,GO:0006082,GO:0006090,GO:0006091,GO:0006094,GO:0006096,GO:0006139,GO:0006163,GO:0006164,GO:0006165,GO:0006725,GO:0006732,GO:0006733,GO:0006753,GO:0006754,GO:0006757,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0009056,GO:0009058,GO:0009108,GO:0009117,GO:0009123,GO:0009124,GO:0009126,GO:0009127,GO:0009132,GO:0009135,GO:0009141,GO:0009142,GO:0009144,GO:0009145,GO:0009150,GO:0009152,GO:0009156,GO:0009161,GO:0009165,GO:0009166,GO:0009167,GO:0009168,GO:0009179,GO:0009185,GO:0009199,GO:0009201,GO:0009205,GO:0009206,GO:0009259,GO:0009260,GO:0009987,GO:0016051,GO:0016052,GO:0016053,GO:0016310,GO:0016853,GO:0016860,GO:0016861,GO:0017144,GO:0018130,GO:0019318,GO:0019319,GO:0019359,GO:0019362,GO:0019363,GO:0019400,GO:0019405,GO:0019438,GO:0019439,GO:0019563,GO:0019637,GO:0019682,GO:0019693,GO:0019751,GO:0019752,GO:0032787,GO:0034404,GO:0034641,GO:0034654,GO:0034655,GO:0042866,GO:0043436,GO:0044237,GO:0044238,GO:0044248,GO:0044249,GO:0044262,GO:0044270,GO:0044271,GO:0044275,GO:0044281,GO:0044282,GO:0044283,GO:0044424,GO:0044444,GO:0044464,GO:0046031,GO:0046034,GO:0046164,GO:0046166,GO:0046174,GO:0046184,GO:0046364,GO:0046390,GO:0046394,GO:0046434,GO:0046483,GO:0046496,GO:0046700,GO:0046939,GO:0051186,GO:0051188,GO:0055086,GO:0071704,GO:0072330,GO:0072521,GO:0072522,GO:0072524,GO:0072525,GO:0090407,GO:1901135,GO:1901137,GO:1901292,GO:1901293,GO:1901360,GO:1901361,GO:1901362,GO:1901564,GO:1901566,GO:1901575,GO:1901576,GO:1901615,GO:1901616 5.3.1.1 0.00000000000000000000000000000000000000000000000000000000000000000000001589 269.0
DYD1_k127_5041530_7 Belongs to the peptidase S26 family K03100 - 3.4.21.89 0.0000000000000000000000000000000000000000000000000004306 191.0
DYD1_k127_5041530_8 histidine kinase A domain protein K02482 - 2.7.13.3 0.000000000000000001176 100.0
DYD1_k127_5041530_9 protein conserved in bacteria - GO:0008150,GO:0031279,GO:0031281,GO:0043085,GO:0044093,GO:0045761,GO:0045762,GO:0050790,GO:0051339,GO:0051349,GO:0065007,GO:0065009 - 0.00000000000000001129 96.0
DYD1_k127_5083336_0 CoA binding domain K09181 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003547 496.0
DYD1_k127_5083336_1 Catalyzes the reversible cleavage of pseudouridine 5'- phosphate (PsiMP) to ribose 5-phosphate and uracil. Functions biologically in the cleavage direction, as part of a pseudouridine degradation pathway K16329 - 4.2.1.70 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000006187 309.0
DYD1_k127_5083336_2 PFAM PfkB domain protein K16328 - 2.7.1.83 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000009689 293.0
DYD1_k127_5083336_3 PFAM magnesium chelatase ChlI subunit K07391 - - 0.0000000000000000000000000000000000000000000000000000000000000000000002204 241.0
DYD1_k127_5083336_5 stress-induced mitochondrial fusion K04066,K07037,K17266 - - 0.000000006119 68.0
DYD1_k127_5083336_6 PFAM Roadblock LC7 family protein K07131 - - 0.0000002742 57.0
DYD1_k127_5119606_0 DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates K03046 GO:0000428,GO:0005575,GO:0005622,GO:0005623,GO:0030880,GO:0032991,GO:0044424,GO:0044464,GO:0061695,GO:1902494,GO:1990234 2.7.7.6 0.0 1500.0
DYD1_k127_5119606_1 PFAM thymidine kinase K00857 GO:0003674,GO:0003824,GO:0004797,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006139,GO:0006213,GO:0006259,GO:0006725,GO:0006753,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009116,GO:0009117,GO:0009120,GO:0009123,GO:0009124,GO:0009157,GO:0009162,GO:0009165,GO:0009987,GO:0016301,GO:0016310,GO:0016740,GO:0016772,GO:0018130,GO:0019136,GO:0019205,GO:0019206,GO:0019438,GO:0019637,GO:0034641,GO:0034654,GO:0043170,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044271,GO:0044281,GO:0044424,GO:0044444,GO:0044464,GO:0046104,GO:0046125,GO:0046483,GO:0055086,GO:0071704,GO:0072527,GO:0090304,GO:0090407,GO:1901135,GO:1901293,GO:1901360,GO:1901362,GO:1901564,GO:1901576,GO:1901657 2.7.1.21 0.000000000000000000000000000000000000000000000000000000000000000000000000000000003481 276.0
DYD1_k127_5119606_2 impB/mucB/samB family K02346 - 2.7.7.7 0.000000000000000000000000000000000000000000000000000000000000000000000000001586 264.0
DYD1_k127_5119606_3 PFAM Polynucleotide adenylyltransferase region K00970,K00974 - 2.7.7.19,2.7.7.72 0.0000000000000000000000000000000000000000000000000000000000000000000000001384 267.0
DYD1_k127_5119606_4 Belongs to the purine pyrimidine phosphoribosyltransferase family K00760 - 2.4.2.8 0.00000000000000000000000000000000000000000000000000000000000000000000002903 253.0
DYD1_k127_5119606_5 Binds the 23S rRNA K02909 - - 0.0000000000000000000000000000000000000000000000000002612 193.0
DYD1_k127_5119606_6 Belongs to the bacterial ribosomal protein bL27 family K02899 GO:0003674,GO:0003735,GO:0005198,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0015934,GO:0022625,GO:0022626,GO:0032991,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:1990904 - 0.000000000000000000000000000004868 126.0
DYD1_k127_5119606_7 This protein binds to 23S rRNA in the presence of protein L20 K02888 GO:0003674,GO:0003735,GO:0005198 - 0.0000000000000000000002272 104.0
DYD1_k127_5132283_0 Catalyzes the transfer of a methyl group from 5- methyltetrahydrofolate to homocysteine resulting in methionine formation - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000002045 295.0
DYD1_k127_5132283_1 - - - - 0.0000000000000000000000000000000000000000000000000001836 194.0
DYD1_k127_5132283_2 Methyl-viologen-reducing hydrogenase, delta subunit - - - 0.0000000000000000000000000000000000000000004093 164.0
DYD1_k127_5132283_3 Catalyzes the deamination of 5-methylthioadenosine and S-adenosyl-L-homocysteine into 5-methylthioinosine and S-inosyl-L- homocysteine, respectively. Is also able to deaminate adenosine K12960,K20810 GO:0003674,GO:0003824,GO:0016787,GO:0016810,GO:0016814,GO:0019239,GO:0050270 3.5.4.28,3.5.4.31,3.5.4.40 0.0000000000000000000005243 108.0
DYD1_k127_5132283_4 4Fe-4S ferredoxin iron-sulfur binding domain protein K03388 - 1.8.7.3,1.8.98.4,1.8.98.5,1.8.98.6 0.00000000000000001518 83.0
DYD1_k127_5150381_0 Catalyzes the synthesis of GMP from XMP K01951 - 6.3.5.2 6.186e-216 681.0
DYD1_k127_5150381_1 NTF2-like N-terminal transpeptidase domain K05515 - 3.4.16.4 3.806e-196 638.0
DYD1_k127_5150381_10 SMART protein phosphatase 2C domain protein K20074 - 3.1.3.16 0.00000000000000000000000000000000000000000000000000000001443 223.0
DYD1_k127_5150381_11 alpha-ribazole phosphatase activity K02226,K15634,K22305 - 3.1.3.3,3.1.3.73,5.4.2.12 0.00000000000000000000000000000000000000000000000000000001981 205.0
DYD1_k127_5150381_12 Represses a number of genes involved in the response to DNA damage (SOS response), including recA and lexA. In the presence of single-stranded DNA, RecA interacts with LexA causing an autocatalytic cleavage which disrupts the DNA-binding part of LexA, leading to derepression of the SOS regulon and eventually DNA repair K01356 - 3.4.21.88 0.000000000000000000000000000000000000000000000000000002461 199.0
DYD1_k127_5150381_13 PFAM Maf family protein K06287 - - 0.00000000000000000000000000000000000000000000000000005678 203.0
DYD1_k127_5150381_14 SMART protein phosphatase 2C domain protein K20074 - 3.1.3.16 0.000000000000000000000000000000000000000000000001643 186.0
DYD1_k127_5150381_15 PFAM binding-protein-dependent transport systems inner membrane component K02033 - - 0.0000000000000000000000000000000000000000000008297 181.0
DYD1_k127_5150381_18 DnaJ molecular chaperone homology domain - - - 0.0000000000008411 79.0
DYD1_k127_5150381_19 PFAM ErfK YbiS YcfS YnhG family protein - - - 0.00000002057 66.0
DYD1_k127_5150381_2 PFAM AAA ATPase central domain protein K07478 - - 4.063e-195 627.0
DYD1_k127_5150381_3 Catalyzes the phosphorylation of the 3'-hydroxyl group of dephosphocoenzyme A to form coenzyme A K00859 - 2.7.1.24 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001364 394.0
DYD1_k127_5150381_4 homoserine dehydrogenase K00003 - 1.1.1.3 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002617 373.0
DYD1_k127_5150381_5 One of several proteins that assist in the late maturation steps of the functional core of the 30S ribosomal subunit. Helps release RbfA from mature subunits. May play a role in the assembly of ribosomal proteins into the subunit. Circularly permuted GTPase that catalyzes slow GTP hydrolysis, GTPase activity is stimulated by the 30S ribosomal subunit K06949 - 3.1.3.100 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000674 338.0
DYD1_k127_5150381_6 phosphatidylinositol kinase activity - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000002054 272.0
DYD1_k127_5150381_7 Converts the preformed base xanthine, a product of nucleic acid breakdown, to xanthosine 5'-monophosphate (XMP), so it can be reused for RNA or DNA synthesis K03816 - 2.4.2.22 0.0000000000000000000000000000000000000000000000000000000000000000000000000069 260.0
DYD1_k127_5150381_8 Protein of unknown function (DUF3090) - - - 0.000000000000000000000000000000000000000000000000000000000000000769 224.0
DYD1_k127_5150381_9 histone H2A K63-linked ubiquitination - - - 0.0000000000000000000000000000000000000000000000000000000000001547 238.0
DYD1_k127_5161511_0 Penicillin amidase K01434 - 3.5.1.11 5.389e-242 772.0
DYD1_k127_5161511_1 PFAM response regulator receiveR - - - 0.000000000000000000000000000000000000000000000000000000005839 208.0
DYD1_k127_5161511_2 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) - - - 0.000000000000000000000000000000000000000000001441 191.0
DYD1_k127_5161511_3 HD domain - - - 0.0000000000000000000000000000000000003191 156.0
DYD1_k127_5161511_4 biotin lipoate A B protein ligase K03524 - 6.3.4.15 0.00000000000000000000000000000004059 133.0
DYD1_k127_5161511_5 His Kinase A (phosphoacceptor) domain - - - 0.000000000000000000000001032 105.0
DYD1_k127_5161511_6 Multi-sensor signal transduction histidine kinase - - - 0.0000000000000000000751 103.0
DYD1_k127_5221094_0 PFAM penicillin-binding protein transpeptidase K05515 - 3.4.16.4 4.307e-204 664.0
DYD1_k127_5221094_1 Involved in formation and maintenance of cell shape K03570 - - 0.0000000000000000000000000000000000000000000000000000000004677 209.0
DYD1_k127_5221094_2 Cell division inhibitor that blocks the formation of polar Z ring septums. Rapidly oscillates between the poles of the cell to destabilize FtsZ filaments that have formed before they mature into polar Z rings. Prevents FtsZ polymerization K03610 - - 0.00000000000000000000000000000000000000000000000000000225 203.0
DYD1_k127_5221094_3 - K03571 - - 0.00007004 55.0
DYD1_k127_5230189_0 PFAM acyl-CoA dehydrogenase domain protein K00249 - 1.3.8.7 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002633 430.0
DYD1_k127_5230189_1 RibD C-terminal domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000005455 259.0
DYD1_k127_5230189_2 - - - - 0.000000000000000000000000000000000000000000000000000000000000000000000004642 252.0
DYD1_k127_5230189_3 COG1985 Pyrimidine reductase, riboflavin biosynthesis K00082,K11752 - 1.1.1.193,3.5.4.26 0.000000000000000000000000000000000000000000000000000000000007763 216.0
DYD1_k127_5230189_4 COG1063 Threonine dehydrogenase and related Zn-dependent dehydrogenases - - - 0.00000000000000000000000000000000000000000000000000002004 200.0
DYD1_k127_5230189_5 Conserved hypothetical protein (DUF2461) - - - 0.000000000000000000000000000000000000001089 156.0
DYD1_k127_5257685_0 PFAM ABC transporter K01990 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000806 283.0
DYD1_k127_5257685_1 Acetyltransferase (GNAT) domain - - - 0.00000000000000000000000000005824 128.0
DYD1_k127_5257685_2 ABC-2 type transporter - - - 0.00000000000000001765 93.0
DYD1_k127_5273501_0 transferase activity, transferring glycosyl groups K09118,K13693,K21349 - 2.4.1.266,2.4.1.268 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001943 573.0
DYD1_k127_5273501_1 hydrolase activity, hydrolyzing O-glycosyl compounds K00690 - 2.4.1.7 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000433 557.0
DYD1_k127_5273501_2 Glycosyl transferases group 1 - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000844 456.0
DYD1_k127_5273501_3 histidine kinase HAMP region domain protein - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009387 306.0
DYD1_k127_5273501_4 Glycosyltransferase Family 4 K21369 - 2.4.1.270 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000004623 317.0
DYD1_k127_5273501_5 CAAX protease self-immunity K07052 - - 0.0000000000000000000000000000000000000000000000000001083 202.0
DYD1_k127_5273501_6 Belongs to the phosphoglycerate mutase family K15634 - 5.4.2.12 0.00000000000000000000000000000000000000000009891 166.0
DYD1_k127_5273501_8 Domain of unknown function (DUF3786) - - - 0.000000000000000000000001516 113.0
DYD1_k127_5273501_9 Transglycosylase SLT domain - - - 0.00000001476 64.0
DYD1_k127_5285315_0 Belongs to the carbamoyltransferase HypF family K04656 - - 6.623e-263 845.0
DYD1_k127_5285315_1 Hydrogenase accessory protein HypB K03189,K04652 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000007436 298.0
DYD1_k127_5285315_2 Probably plays a role in a hydrogenase nickel cofactor insertion step K04651 - - 0.000000000000000000000000000007011 123.0
DYD1_k127_5285315_3 PFAM Protein kinase K12132,K13419 GO:0003674,GO:0003824,GO:0004672,GO:0004674,GO:0005488,GO:0005515,GO:0005575,GO:0005618,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005886,GO:0006355,GO:0006464,GO:0006468,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0009889,GO:0009987,GO:0010468,GO:0010556,GO:0016020,GO:0016301,GO:0016310,GO:0016740,GO:0016772,GO:0016773,GO:0019219,GO:0019222,GO:0019538,GO:0030312,GO:0031323,GO:0031326,GO:0036211,GO:0042802,GO:0043170,GO:0043412,GO:0044237,GO:0044238,GO:0044260,GO:0044267,GO:0044424,GO:0044444,GO:0044464,GO:0046777,GO:0050789,GO:0050794,GO:0051090,GO:0051171,GO:0051252,GO:0060255,GO:0065007,GO:0065009,GO:0071704,GO:0071944,GO:0080090,GO:0140096,GO:1901564,GO:1903506,GO:2000112,GO:2001141 2.7.11.1 0.0001078 46.0
DYD1_k127_5310320_0 (ABC) transporter K06147 - - 1.8e-214 681.0
DYD1_k127_5310320_1 PFAM ABC transporter transmembrane region K06147 - - 1.62e-200 641.0
DYD1_k127_5310320_2 PBP superfamily domain K05772 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005843 367.0
DYD1_k127_5310320_3 heat shock protein binding - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001106 344.0
DYD1_k127_5310320_4 MoeA domain protein domain I and II K03750,K07219 - 2.10.1.1 0.0000000000000000000000000000000000000000000000000231 200.0
DYD1_k127_5310320_5 ferredoxin-NADP+ reductase activity - - - 0.000000001941 58.0
DYD1_k127_5336534_0 Catalyzes two steps in the biosynthesis of coenzyme A. In the first step cysteine is conjugated to 4'-phosphopantothenate to form 4-phosphopantothenoylcysteine, in the latter compound is decarboxylated to form 4'-phosphopantotheine K13038 - 4.1.1.36,6.3.2.5 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000416 446.0
DYD1_k127_5336534_1 EamA-like transporter family - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001053 371.0
DYD1_k127_5336534_2 Catalyzes the phosphorylation of pantothenate (Pan), the first step in CoA biosynthesis K03525 - 2.7.1.33 0.000000000000000000000000000000000000000000000000000000000000000000000000000000167 281.0
DYD1_k127_5336534_3 Catalyzes the condensation of pantoate with beta-alanine in an ATP-dependent reaction via a pantoyl-adenylate intermediate K01918 GO:0003674,GO:0003824,GO:0004592,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006082,GO:0006520,GO:0006573,GO:0006575,GO:0006732,GO:0006766,GO:0006767,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009081,GO:0009108,GO:0009110,GO:0009987,GO:0015939,GO:0015940,GO:0016053,GO:0016874,GO:0016879,GO:0016881,GO:0019752,GO:0032787,GO:0033317,GO:0034641,GO:0042364,GO:0042398,GO:0043436,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0044283,GO:0044424,GO:0044444,GO:0044464,GO:0046394,GO:0051186,GO:0051188,GO:0071704,GO:0072330,GO:1901564,GO:1901566,GO:1901576,GO:1901605 6.3.2.1 0.000000000000000000000000000000000000000000000000000000002274 204.0
DYD1_k127_5356563_0 PFAM carboxyl transferase K01966 - 2.1.3.15,6.4.1.3 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004477 526.0
DYD1_k127_5356563_1 4-amino-4-deoxy-L-arabinose transferase and related glycosyltransferases of PMT family - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003675 457.0
DYD1_k127_5356563_2 Zinc-binding dehydrogenase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000003525 307.0
DYD1_k127_5356563_3 Dolichyl-phosphate-mannose-protein mannosyltransferase - - - 0.00000000000000000000000000000000000000000000000000000000000000000005467 255.0
DYD1_k127_5356563_4 Bacterial membrane protein YfhO - - - 0.00000000000001637 89.0
DYD1_k127_5367099_0 Respiratory-chain NADH dehydrogenase, 49 Kd subunit K14090 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000602 589.0
DYD1_k127_5367099_1 PFAM Nickel-dependent hydrogenase, large subunit - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001469 538.0
DYD1_k127_5367099_10 Histidine kinase - - - 0.0000000000000000000000000000000000000000000000000000001719 212.0
DYD1_k127_5367099_11 4Fe-4S binding domain K14091 - - 0.000000000000000000000000000029 132.0
DYD1_k127_5367099_12 phosphorelay signal transduction system - - - 0.0000000000000000000000000005491 130.0
DYD1_k127_5367099_13 spore germination K03605 - - 0.00000000000000000000000002466 114.0
DYD1_k127_5367099_14 - - - - 0.00000000000000000000002539 115.0
DYD1_k127_5367099_15 Respiratory-chain NADH dehydrogenase, 30 Kd subunit K18017 - 1.12.7.2 0.00000000000001368 78.0
DYD1_k127_5367099_16 COG0664 cAMP-binding proteins - catabolite gene activator and regulatory subunit of cAMP-dependent protein kinases - - - 0.0000000000003093 75.0
DYD1_k127_5367099_17 Hydrogenase maturation protease K08315 - 3.4.23.51 0.00000000009781 71.0
DYD1_k127_5367099_2 ABC-type sugar transport system periplasmic component K10232 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001998 462.0
DYD1_k127_5367099_3 quinone binding K00337 - 1.6.5.3 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002527 401.0
DYD1_k127_5367099_4 4Fe-4S dicluster domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001436 406.0
DYD1_k127_5367099_5 Glycine cleavage T-protein C-terminal barrel domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006847 389.0
DYD1_k127_5367099_6 Iron-sulfur cluster binding domain of dihydroorotate dehydrogenase B - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006827 383.0
DYD1_k127_5367099_7 Histidine kinase HAMP K02482 - 2.7.13.3 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001919 338.0
DYD1_k127_5367099_8 NADH ubiquinone oxidoreductase, 20 Kd subunit - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009625 326.0
DYD1_k127_5367099_9 Inner membrane component of T3SS, cytoplasmic domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000004262 277.0
DYD1_k127_5383966_0 Associated with various cellular activities - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002004 437.0
DYD1_k127_5383966_1 FAD dependent oxidoreductase K00301 - 1.5.3.1 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006088 402.0
DYD1_k127_5383966_10 DNA-binding transcription factor activity - - - 0.0000000000000001725 90.0
DYD1_k127_5383966_11 Methylase involved in ubiquinone menaquinone biosynthesis - - - 0.000000000004582 76.0
DYD1_k127_5383966_12 Glycosyl transferases group 1 - - - 0.0000001608 63.0
DYD1_k127_5383966_2 PFAM VWA containing CoxE family protein K07161 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002528 381.0
DYD1_k127_5383966_3 amino acid transport K09969 GO:0005575,GO:0005623,GO:0042597,GO:0044464 - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004463 376.0
DYD1_k127_5383966_4 PFAM fumarylacetoacetate (FAA) hydrolase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004281 344.0
DYD1_k127_5383966_5 Belongs to the dCTP deaminase family K01494 - 3.5.4.13 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003713 334.0
DYD1_k127_5383966_6 PFAM peptidase M1, membrane alanine aminopeptidase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000003702 279.0
DYD1_k127_5383966_7 protein kinase activity - - - 0.00000000000000000000000000000000000000000000000000000000000000009376 241.0
DYD1_k127_5383966_8 Catalyzes the reversible interconversion of serine and glycine with tetrahydrofolate (THF) serving as the one-carbon carrier. This reaction serves as the major source of one-carbon groups required for the biosynthesis of purines, thymidylate, methionine, and other important biomolecules. Also exhibits THF- independent aldolase activity toward beta-hydroxyamino acids, producing glycine and aldehydes, via a retro-aldol mechanism K00600 - 2.1.2.1 0.0000000000000000000000000000000000000000000000000000001505 198.0
DYD1_k127_5383966_9 response regulator, receiver K09763 - - 0.0000000000000000000000000000000000007913 150.0
DYD1_k127_5386024_0 TIGRFAM succinate dehydrogenase and fumarate reductase iron-sulfur protein K00240 - 1.3.5.1,1.3.5.4 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001845 347.0
DYD1_k127_5386024_1 Thiamine pyrophosphate enzyme, central domain K01652 - 2.2.1.6 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000214 331.0
DYD1_k127_5386024_2 Histone deacetylase domain K04768 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000001095 304.0
DYD1_k127_5386024_3 Adenylyl- / guanylyl cyclase, catalytic domain - - - 0.00000000000000000000000000000000000000000000000000000000001355 225.0
DYD1_k127_5386024_4 PFAM fumarate reductase succinate dehydrogenase flavoprotein domain protein K00239 - 1.3.5.1,1.3.5.4 0.0000000000000000000000000000000000000000000000000000005582 196.0
DYD1_k127_5386024_5 Cysteine-rich secretory protein family - - - 0.00000000000000000000000004919 121.0
DYD1_k127_5386024_6 cyclic nucleotide binding K04739,K10914 - - 0.0000000000002986 79.0
DYD1_k127_5386024_7 - - - - 0.00002114 56.0
DYD1_k127_5391743_0 Flavin containing amine oxidoreductase - - - 1.556e-203 643.0
DYD1_k127_5391743_1 PFAM DAHP synthetase I KDSA K03856 - 2.5.1.54 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000263 480.0
DYD1_k127_5391743_2 Flavin containing amine oxidoreductase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001137 432.0
DYD1_k127_5391743_3 Catalyzes the transfer of the enolpyruvyl moiety of phosphoenolpyruvate (PEP) to the 5-hydroxyl of shikimate-3- phosphate (S3P) to produce enolpyruvyl shikimate-3-phosphate and inorganic phosphate K00800 - 2.5.1.19 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003959 397.0
DYD1_k127_5391743_4 NAD-dependent glycerol-3-phosphate dehydrogenase domain protein K04517 - 1.3.1.12 0.000000000000000000000000000000000000000000000000009036 195.0
DYD1_k127_5391743_5 Involved in the biosynthesis of the chorismate, which leads to the biosynthesis of aromatic amino acids. Catalyzes the reversible NADPH linked reduction of 3-dehydroshikimate (DHSA) to yield shikimate (SA) K00014 - 1.1.1.25 0.000000000000000000000000000000000000001707 160.0
DYD1_k127_5391743_6 PFAM Chorismate mutase of the AroH class K06208 - 5.4.99.5 0.000000000000000000000000000000003566 134.0
DYD1_k127_5391743_7 Calcineurin-like phosphoesterase superfamily domain K07095 - - 0.000000000000000000000000000001316 129.0
DYD1_k127_5417535_0 Catalyzes the transfer of a methyl group from 5- methyltetrahydrofolate to homocysteine resulting in methionine formation K00549 - 2.1.1.14 4.72e-295 924.0
DYD1_k127_5417535_1 Homocysteine S-methyltransferase K00297,K00547 - 1.5.1.20,2.1.1.10 3.083e-243 767.0
DYD1_k127_5417535_10 Histidine kinase - - - 0.000000000000000000000000000000000000000000000001185 199.0
DYD1_k127_5417535_11 Transcriptional coactivator pterin dehydratase K01724 - 4.2.1.96 0.00000000000000000000000000000000000000878 148.0
DYD1_k127_5417535_12 PFAM alkyl hydroperoxide reductase Thiol specific antioxidant Mal allergen - - - 0.0000000000000000000000000000000003259 138.0
DYD1_k127_5417535_13 WD40-like Beta Propeller Repeat K03641 - - 0.000000000000000000000000000001605 137.0
DYD1_k127_5417535_14 Diguanylate cyclase phosphodiesterase with PAS PAC sensor(S) - - - 0.0000000000000000000000007613 122.0
DYD1_k127_5417535_15 Belongs to the UPF0337 (CsbD) family - - - 0.0000000000000000009518 90.0
DYD1_k127_5417535_16 Cold shock protein K03704 - - 0.00000000000000001619 90.0
DYD1_k127_5417535_17 ubiquitin binding K17987 GO:0003674,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005768,GO:0005770,GO:0005773,GO:0005829,GO:0006914,GO:0008150,GO:0008152,GO:0009056,GO:0009987,GO:0012505,GO:0016043,GO:0016236,GO:0022607,GO:0031410,GO:0031982,GO:0032182,GO:0034622,GO:0043130,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0043933,GO:0044085,GO:0044237,GO:0044248,GO:0044424,GO:0044444,GO:0044464,GO:0051258,GO:0051259,GO:0061919,GO:0065003,GO:0071840,GO:0097708 - 0.00000000000227 81.0
DYD1_k127_5417535_18 alpha beta - - - 0.000000003733 67.0
DYD1_k127_5417535_19 Cation transport regulator K06197 - - 0.000002366 53.0
DYD1_k127_5417535_2 Is required not only for elongation of protein synthesis but also for the initiation of all mRNA translation through initiator tRNA(fMet) aminoacylation K01874 - 6.1.1.10 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009082 562.0
DYD1_k127_5417535_20 DNA internalization-related competence protein ComEC Rec2 K02238 - - 0.0005322 47.0
DYD1_k127_5417535_3 Catalyzes the reversible reaction in which hydroxymethyl group from 5,10-methylenetetrahydrofolate is transferred onto alpha-ketoisovalerate to form ketopantoate K00606 - 2.1.2.11 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002147 358.0
DYD1_k127_5417535_4 glutamine-fructose-6-phosphate transaminase (isomerizing) activity K00820,K15916 - 2.6.1.16,5.3.1.8,5.3.1.9 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002881 359.0
DYD1_k127_5417535_5 Two component transcriptional regulator, LuxR family - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000001343 291.0
DYD1_k127_5417535_6 Catalyzes the 2'-O-methylation of the ribose of cytidine 1402 (C1402) in 16S rRNA K07056 GO:0000154,GO:0000451,GO:0000453,GO:0001510,GO:0003674,GO:0003824,GO:0005575,GO:0005623,GO:0005886,GO:0006139,GO:0006364,GO:0006396,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0008168,GO:0008171,GO:0008173,GO:0008649,GO:0008757,GO:0009451,GO:0009987,GO:0010467,GO:0016020,GO:0016070,GO:0016072,GO:0016434,GO:0016740,GO:0016741,GO:0022613,GO:0031167,GO:0032259,GO:0034470,GO:0034641,GO:0034660,GO:0042254,GO:0043170,GO:0043412,GO:0043414,GO:0044085,GO:0044237,GO:0044238,GO:0044260,GO:0044464,GO:0046483,GO:0070677,GO:0071704,GO:0071840,GO:0071944,GO:0090304,GO:0140098,GO:0140102,GO:1901360 2.1.1.198 0.000000000000000000000000000000000000000000000000000000000000000000000000000000002989 280.0
DYD1_k127_5417535_7 sh3 domain protein - - - 0.000000000000000000000000000000000000000000000000000000000000000000005583 261.0
DYD1_k127_5417535_8 Catalyzes the NADPH-dependent reduction of ketopantoate into pantoic acid K00077 - 1.1.1.169 0.0000000000000000000000000000000000000000000000000000000000000001787 231.0
DYD1_k127_5417535_9 Catalyzes the condensation of pantoate with beta-alanine in an ATP-dependent reaction via a pantoyl-adenylate intermediate K01918 GO:0003674,GO:0003824,GO:0004592,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006082,GO:0006520,GO:0006573,GO:0006575,GO:0006732,GO:0006766,GO:0006767,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009081,GO:0009108,GO:0009110,GO:0009987,GO:0015939,GO:0015940,GO:0016053,GO:0016874,GO:0016879,GO:0016881,GO:0019752,GO:0032787,GO:0033317,GO:0034641,GO:0042364,GO:0042398,GO:0043436,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0044283,GO:0044424,GO:0044444,GO:0044464,GO:0046394,GO:0051186,GO:0051188,GO:0071704,GO:0072330,GO:1901564,GO:1901566,GO:1901576,GO:1901605 6.3.2.1 0.00000000000000000000000000000000000000000000000000000005068 202.0
DYD1_k127_5421382_0 short-chain dehydrogenase reductase SDR K12454 - 5.1.3.10 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002452 408.0
DYD1_k127_5421382_1 ubiE/COQ5 methyltransferase family - - - 0.0000000000000000000000000000002312 134.0
DYD1_k127_5421382_2 PFAM Glycosyl transferase family 2 - - - 0.0000000000000000000000000000004897 133.0
DYD1_k127_5421382_3 GDP-Man:Man2GlcNAc2-PP-dolichol alpha-1,6-mannosyltransferase activity K03843 GO:0000030,GO:0000033,GO:0003674,GO:0003824,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005634,GO:0005737,GO:0005783,GO:0005789,GO:0005829,GO:0005856,GO:0006464,GO:0006486,GO:0006487,GO:0006488,GO:0006490,GO:0006629,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009100,GO:0009101,GO:0009987,GO:0010035,GO:0010038,GO:0012505,GO:0015629,GO:0016020,GO:0016740,GO:0016757,GO:0016758,GO:0019538,GO:0031984,GO:0033577,GO:0034645,GO:0036211,GO:0042175,GO:0042221,GO:0043170,GO:0043226,GO:0043227,GO:0043228,GO:0043229,GO:0043231,GO:0043232,GO:0043412,GO:0043413,GO:0044237,GO:0044238,GO:0044249,GO:0044255,GO:0044260,GO:0044267,GO:0044422,GO:0044424,GO:0044425,GO:0044432,GO:0044444,GO:0044446,GO:0044464,GO:0046982,GO:0046983,GO:0047485,GO:0048306,GO:0048471,GO:0050896,GO:0051592,GO:0070085,GO:0071704,GO:0097502,GO:0098827,GO:1901135,GO:1901137,GO:1901564,GO:1901566,GO:1901576 2.4.1.132,2.4.1.257 0.0000000000000000000000005784 122.0
DYD1_k127_5421382_4 O-methyltransferase that catalyzes the 2 O-methylation steps in the ubiquinone biosynthetic pathway K00568 - 2.1.1.222,2.1.1.64 0.000000000002973 78.0
DYD1_k127_5421382_5 Transmembrane exosortase (Exosortase_EpsH) - - - 0.0003224 51.0
DYD1_k127_5457061_0 DNA polymerase III is a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria. This DNA polymerase also exhibits 3' to 5' exonuclease activity K02343 - 2.7.7.7 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000145 498.0
DYD1_k127_5457061_1 May play a role in DNA repair. It seems to be involved in an RecBC-independent recombinational process of DNA repair. It may act with RecF and RecO K06187 - - 0.000000000000000000000000000000000000000000000000000000000000000000001086 245.0
DYD1_k127_5457061_3 competence protein COMEC K02238 - - 0.000000000002393 77.0
DYD1_k127_5457061_5 - - - - 0.000000006951 56.0
DYD1_k127_5457061_6 Polysaccharide deacetylase K22278 - 3.5.1.104 0.00000179 59.0
DYD1_k127_5457061_7 Binds to DNA and alters its conformation. May be involved in regulation of gene expression, nucleoid organization and DNA protection K09747 - - 0.00006979 53.0
DYD1_k127_5469391_0 - - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005385 403.0
DYD1_k127_5469391_1 Lysin motif - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005928 338.0
DYD1_k127_5469391_2 phosphorelay signal transduction system - - - 0.000000000000000000000000000000000000000004667 161.0
DYD1_k127_5469391_3 - - - - 0.00000000000000000000000000000000000001588 154.0
DYD1_k127_5469391_4 Proline dehydrogenase K00318 - - 0.0000000000000000000000000000000000006447 145.0
DYD1_k127_5470120_0 Catalyzes the conversion of acetate into acetyl-CoA (AcCoA), an essential intermediate at the junction of anabolic and catabolic pathways. AcsA undergoes a two-step reaction. In the first half reaction, AcsA combines acetate with ATP to form acetyl-adenylate (AcAMP) intermediate. In the second half reaction, it can then transfer the acetyl group from AcAMP to the sulfhydryl group of CoA, forming the product AcCoA K01895 - 6.2.1.1 0.0 1003.0
DYD1_k127_5470120_1 Catalyzes the attachment of threonine to tRNA(Thr) in a two-step reaction L-threonine is first activated by ATP to form Thr-AMP and then transferred to the acceptor end of tRNA(Thr) K01868 - 6.1.1.3 3.707e-235 743.0
DYD1_k127_5470120_10 PFAM EamA-like transporter family - - - 0.000000000000000000000000000000000000004295 159.0
DYD1_k127_5470120_11 - - - - 0.0000000000000000000000000001367 118.0
DYD1_k127_5470120_13 Protein of unknown function (DUF429) - - - 0.000000000000512 79.0
DYD1_k127_5470120_14 Endonuclease Exonuclease Phosphatase - - - 0.000009739 59.0
DYD1_k127_5470120_2 4fe-4S ferredoxin, iron-sulfur binding domain protein - - - 5.089e-232 736.0
DYD1_k127_5470120_3 Belongs to the aldehyde dehydrogenase family K00294 - 1.2.1.88 1.503e-229 724.0
DYD1_k127_5470120_4 Dehydrogenase E1 component K00166 - 1.2.4.4 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000199 343.0
DYD1_k127_5470120_5 Transketolase, pyrimidine binding domain K00167,K21417 - 1.2.4.4 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000001744 288.0
DYD1_k127_5470120_6 uracil-DNA glycosylase K21929 - 3.2.2.27 0.00000000000000000000000000000000000000000000000000000000000000000000000000005516 271.0
DYD1_k127_5470120_7 ErfK ybiS ycfS ynhG family protein - - - 0.00000000000000000000000000000000000000000000000000000000000000000001094 251.0
DYD1_k127_5470120_8 Protein of unknown function (DUF664) - - - 0.00000000000000000000000000000000000000000000000000000001022 203.0
DYD1_k127_5470120_9 PFAM DSBA oxidoreductase - - - 0.0000000000000000000000000000000000000000000000004055 185.0
DYD1_k127_5494699_0 Part of the Sec protein translocase complex. Interacts with the SecYEG preprotein conducting channel. Has a central role in coupling the hydrolysis of ATP to the transfer of proteins into and across the cell membrane, serving as an ATP-driven molecular motor driving the stepwise translocation of polypeptide chains across the membrane K03070 GO:0000166,GO:0003674,GO:0003824,GO:0005215,GO:0005488,GO:0005524,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005886,GO:0005887,GO:0006810,GO:0008104,GO:0008144,GO:0008150,GO:0008320,GO:0008565,GO:0015031,GO:0015399,GO:0015405,GO:0015440,GO:0015450,GO:0015462,GO:0015833,GO:0016020,GO:0016021,GO:0016462,GO:0016787,GO:0016817,GO:0016818,GO:0016887,GO:0017076,GO:0017111,GO:0022804,GO:0022857,GO:0022884,GO:0030554,GO:0031224,GO:0031226,GO:0031522,GO:0032553,GO:0032555,GO:0032559,GO:0032991,GO:0033036,GO:0033220,GO:0035639,GO:0036094,GO:0042623,GO:0042626,GO:0042886,GO:0042887,GO:0043167,GO:0043168,GO:0043492,GO:0043952,GO:0044424,GO:0044425,GO:0044444,GO:0044459,GO:0044464,GO:0045184,GO:0051179,GO:0051234,GO:0055085,GO:0071702,GO:0071705,GO:0071806,GO:0071944,GO:0097159,GO:0097367,GO:1901265,GO:1901363,GO:1904680 - 3.71e-277 867.0
DYD1_k127_5494699_1 Carbohydrate family 9 binding domain-like - - - 0.00000000000000000000000000000000000000000000000000303 196.0
DYD1_k127_5494699_2 Universal stress protein - - - 0.0000000000000000000006242 103.0
DYD1_k127_5526097_1 PFAM TadE family protein K12287 - - 0.00000000000000000000000000000000001128 152.0
DYD1_k127_5526097_2 PFAM TadE family protein - - - 0.00000004824 56.0
DYD1_k127_5534928_0 PFAM ABC transporter related K09972 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002491 412.0
DYD1_k127_5534928_1 TIGRFAM polar amino acid ABC transporter, inner membrane subunit K09970 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009692 347.0
DYD1_k127_5534928_2 Binding-protein-dependent transport system inner membrane component K09971 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000002836 286.0
DYD1_k127_5534928_3 AzlC protein - - - 0.00000000000000000000000000000000000000000000000000000000004644 212.0
DYD1_k127_5534928_4 Squalene/phytoene synthase K00801 - 2.5.1.21 0.0000000000000000000000000000000002805 144.0
DYD1_k127_5534928_5 branched-chain amino acid - - - 0.00000000000000000008331 95.0
DYD1_k127_5534928_6 Reversibly transfers an adenylyl group from ATP to 4'- phosphopantetheine, yielding dephospho-CoA (dPCoA) and pyrophosphate K00954 - 2.7.7.3 0.000000000001625 69.0
DYD1_k127_5534928_7 serine-type aminopeptidase activity K14475 - - 0.000009616 55.0
DYD1_k127_5561318_0 Inosine-uridine preferring nucleoside hydrolase K01239 - 3.2.2.1 0.000000000000000000000000000000000000000000000000000000000000004233 228.0
DYD1_k127_5561318_1 Domain of unknown function (DUF333) K09712 - - 0.000000000000002062 87.0
DYD1_k127_5561318_2 - - - - 0.000003845 55.0
DYD1_k127_5567044_0 repeat protein - - - 1.317e-201 644.0
DYD1_k127_5567044_1 Belongs to the binding-protein-dependent transport system permease family K10547 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001777 518.0
DYD1_k127_5567044_2 ABC-type xylose transport system, periplasmic component K10546 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005677 398.0
DYD1_k127_5567044_3 ATPases associated with a variety of cellular activities K02056 - 3.6.3.17 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008866 366.0
DYD1_k127_5567044_4 Sulphur transport K07112 - - 0.000000000000000000000000000000000000001721 151.0
DYD1_k127_5567044_5 cellular response to heat K09807 - - 0.0000000000000000000000000000000000005008 160.0
DYD1_k127_5567044_6 - - - - 0.000000000000000000007423 108.0
DYD1_k127_5567044_7 Involved in the TonB-independent uptake of proteins K03641 - - 0.00000000000000000005783 102.0
DYD1_k127_5567044_8 Bacterial SH3 domain - - - 0.00003416 55.0
DYD1_k127_5568076_0 Elongator protein 3, MiaB family, Radical SAM - - - 3.431e-267 836.0
DYD1_k127_5568076_1 Belongs to the thiolase family K00632 - 2.3.1.16 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006548 483.0
DYD1_k127_5568076_2 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain K01782,K07516 - 1.1.1.35,4.2.1.17,5.1.2.3 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002753 411.0
DYD1_k127_5568076_3 Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain - - - 0.0000000000000000000000000000000000000000000000000000000008236 209.0
DYD1_k127_5568076_4 Uncharacterized protein conserved in bacteria (DUF2344) - - - 0.00000000000000000000000000000000000000000009579 168.0
DYD1_k127_5568076_5 glycosyl transferase family 2 - - - 0.000000000000000000000000000000003543 147.0
DYD1_k127_5568076_6 Belongs to the short-chain dehydrogenases reductases (SDR) family - - - 0.000000000000000000001158 98.0
DYD1_k127_5568076_7 Histidine kinase K07777 - 2.7.13.3 0.0003596 49.0
DYD1_k127_5608844_0 Catalyzes the conversion of GDP-D-mannose to GDP-4- dehydro-6-deoxy-D-mannose K01711 - 4.2.1.47 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001128 537.0
DYD1_k127_5608844_1 PFAM UDP-glucose GDP-mannose dehydrogenase K13015 - 1.1.1.136 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001408 470.0
DYD1_k127_5608844_2 Polysaccharide biosynthesis protein K08679 - 5.1.3.6 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003195 382.0
DYD1_k127_5608844_3 PFAM glycosyl transferase group 1 - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000009996 302.0
DYD1_k127_5608844_4 polysaccharide biosynthetic process K16694 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000006229 286.0
DYD1_k127_5608844_5 PFAM Glycosyl transferase family 2 - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000003412 260.0
DYD1_k127_5608844_6 - - - - 0.000000000000000000000000000000000000000000000000002335 199.0
DYD1_k127_5608844_8 - - - - 0.000347 53.0
DYD1_k127_5616460_0 PFAM major facilitator superfamily MFS_1 - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000115 509.0
DYD1_k127_5616460_1 Catalyzes the gamma-elimination of phosphate from L- phosphohomoserine and the beta-addition of water to produce L- threonine K01733 - 4.2.3.1 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000017 430.0
DYD1_k127_5616460_2 Mediates influx of magnesium ions K03284 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000003236 282.0
DYD1_k127_5616460_3 Catalyzes the ATP-dependent phosphorylation of L- homoserine to L-homoserine phosphate K00872 - 2.7.1.39 0.0000000000000000000000000000000000000000000000000000000000000003985 239.0
DYD1_k127_5616460_4 ROK family K00845 - 2.7.1.2 0.000000000000000000000000000000000000008018 150.0
DYD1_k127_5616460_5 ArsR family transcriptional regulator - - - 0.0000000000003452 81.0
DYD1_k127_5617433_0 Lysine-2,3-aminomutase K01843 - 5.4.3.2 1.028e-236 739.0
DYD1_k127_5617433_1 Belongs to the D-alanine--D-alanine ligase family K01921 - 6.3.2.4 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002544 416.0
DYD1_k127_5617433_2 Hydrophobic domain - - - 0.0000000000000000000000000000000000000000000000008113 201.0
DYD1_k127_5617433_3 COG0531 Amino acid transporters - - - 0.0000000000000000001616 105.0
DYD1_k127_5617433_4 TIGRFAM lysine biosynthesis protein LysW K05826 - - 0.00001262 49.0
DYD1_k127_5620580_0 elongation factor Tu domain 2 protein K02355 - - 1.306e-289 905.0
DYD1_k127_5620580_1 Belongs to the class-I aminoacyl-tRNA synthetase family K01869 - 6.1.1.4 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002858 430.0
DYD1_k127_5620580_2 Creatinase/Prolidase N-terminal domain K01262,K01271 - 3.4.11.9,3.4.13.9 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002122 344.0
DYD1_k127_5620580_3 Belongs to the class-I aminoacyl-tRNA synthetase family K01869 - 6.1.1.4 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001595 330.0
DYD1_k127_5620580_4 Catalyzes the interconversion of 2-phosphoglycerate and 3-phosphoglycerate - - - 0.000000000000000000000000000000000000000000000000000000000000000000000001171 265.0
DYD1_k127_5620580_5 methyltransferase activity K00569 - 2.1.1.67 0.0000000000000000000000000000401 129.0
DYD1_k127_5620580_6 COG1961 Site-specific recombinases, DNA invertase Pin homologs - - - 0.000003635 50.0
DYD1_k127_5620580_7 Cytochrome C biogenesis protein transmembrane region K06196 - - 0.00003749 48.0
DYD1_k127_5639270_1 - - - - 0.000002341 60.0
DYD1_k127_5661905_0 ErfK ybiS ycfS ynhG family protein - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007255 336.0
DYD1_k127_5661905_1 Major role in the synthesis of nucleoside triphosphates other than ATP. The ATP gamma phosphate is transferred to the NDP beta phosphate via a ping-pong mechanism, using a phosphorylated active-site intermediate K00940 GO:0003674,GO:0003824,GO:0004550,GO:0005575,GO:0005622,GO:0005623,GO:0006139,GO:0006163,GO:0006165,GO:0006220,GO:0006725,GO:0006753,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0009117,GO:0009132,GO:0009987,GO:0015949,GO:0016301,GO:0016310,GO:0016740,GO:0016772,GO:0016776,GO:0019205,GO:0019637,GO:0034641,GO:0044237,GO:0044238,GO:0044281,GO:0044464,GO:0046483,GO:0046939,GO:0055086,GO:0071704,GO:0072521,GO:0072527,GO:1901360,GO:1901564 2.7.4.6 0.000000000000000000000000000000000000000000000000000000000000000001377 231.0
DYD1_k127_5661905_2 PFAM Stage II sporulation E family protein - - - 0.00000000000000000000000000000000000000006075 153.0
DYD1_k127_5661905_3 Hydrolyzes RNA 2',3'-cyclic phosphodiester to an RNA 2'- phosphomonoester K01975 - 3.1.4.58 0.0000000000000000000000000000000001398 140.0
DYD1_k127_5661905_4 Functions as a ribosomal silencing factor. Interacts with ribosomal protein L14 (rplN), blocking formation of intersubunit bridge B8. Prevents association of the 30S and 50S ribosomal subunits and the formation of functional ribosomes, thus repressing translation K09710 - - 0.00000000000000000000000000008377 120.0
DYD1_k127_5661905_5 PhoQ Sensor - - - 0.00000000000008505 84.0
DYD1_k127_5661905_6 Tetratricopeptide TPR_2 repeat protein - - - 0.0000000005462 70.0
DYD1_k127_5668249_0 PFAM Mo-co oxidoreductase dimerisation domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000062 375.0
DYD1_k127_5668249_1 Adenylyl- / guanylyl cyclase, catalytic domain K01768 GO:0000287,GO:0003674,GO:0003824,GO:0004016,GO:0005488,GO:0005575,GO:0005623,GO:0005886,GO:0006139,GO:0006163,GO:0006164,GO:0006171,GO:0006725,GO:0006753,GO:0006793,GO:0006796,GO:0006807,GO:0007154,GO:0007165,GO:0008150,GO:0008152,GO:0009058,GO:0009117,GO:0009150,GO:0009152,GO:0009165,GO:0009187,GO:0009190,GO:0009259,GO:0009260,GO:0009975,GO:0009987,GO:0016020,GO:0016829,GO:0016849,GO:0018130,GO:0019438,GO:0019637,GO:0019693,GO:0023052,GO:0030145,GO:0034641,GO:0034654,GO:0043167,GO:0043169,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0044464,GO:0046058,GO:0046390,GO:0046483,GO:0046872,GO:0046914,GO:0050789,GO:0050794,GO:0050896,GO:0051716,GO:0052652,GO:0055086,GO:0065007,GO:0071704,GO:0071944,GO:0072521,GO:0072522,GO:0090407,GO:1901135,GO:1901137,GO:1901293,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576 4.6.1.1 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000498 328.0
DYD1_k127_5668249_2 PFAM Methyltransferase type 11 - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000002734 305.0
DYD1_k127_5668249_3 DUF218 domain - - - 0.000000000000000001215 95.0
DYD1_k127_5668249_4 2'-5' RNA ligase superfamily - - - 0.000000000008552 74.0
DYD1_k127_5668249_5 Trypsin-like serine proteases, typically periplasmic, contain C-terminal PDZ domain - - - 0.00000000003845 66.0
DYD1_k127_5735377_0 Glycosyltransferase family 9 (heptosyltransferase) - - - 0.0000000000000000000000000000000000000000000000000000000001061 218.0
DYD1_k127_5735377_1 - - - - 0.000000000000000000000000001034 114.0
DYD1_k127_5735377_3 PRC-barrel domain - - - 0.0000002407 61.0
DYD1_k127_5788932_0 Oligopeptide/dipeptide transporter, C-terminal region K10823 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002371 438.0
DYD1_k127_5788932_1 Belongs to the ABC transporter superfamily K02031,K15583 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003062 441.0
DYD1_k127_5788932_2 PFAM binding-protein-dependent transport systems inner membrane component K02034 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000002133 281.0
DYD1_k127_5788932_3 nitrogen compound transport K02033 GO:0003674,GO:0005215,GO:0006810,GO:0008150,GO:0022857,GO:0051179,GO:0051234,GO:0055085 - 0.000000000000000000000000000000000000000000000000000000000000000000000000003079 265.0
DYD1_k127_5788932_4 Dienelactone hydrolase family - - - 0.00000000000000000000000000000000000000000000000000000000000000000000003042 263.0
DYD1_k127_5788932_5 Acyl-coenzyme A:6-aminopenicillanic acid acyl-transferase - - - 0.0000000000000000000000000000000000000000000000000000000000003865 225.0
DYD1_k127_5788932_6 ABC-type dipeptide transport system periplasmic component K02035 - - 0.00000000000000000000000000000000000001783 157.0
DYD1_k127_5788932_7 protein, putative amidase K01470 - 3.5.2.10 0.00000000000000000000000007323 121.0
DYD1_k127_5803012_0 Fumarate hydratase (Fumerase) K01676,K01677 - 4.2.1.2 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000228 421.0
DYD1_k127_5803012_1 Fumarase C-terminus K01676,K01678 - 4.2.1.2 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007698 317.0
DYD1_k127_5803012_2 PFAM Cytochrome C assembly protein K02195 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002615 305.0
DYD1_k127_5803012_3 Cytochrome c - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000259 318.0
DYD1_k127_5803012_4 PFAM cytochrome c-type biogenesis protein CcmB K02194 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000003097 303.0
DYD1_k127_5803012_5 PFAM ABC transporter related K02193 - 3.6.3.41 0.000000000000000000000000000000000000000000000000000000000000000000000000000001033 270.0
DYD1_k127_5803012_6 with different specificities (related to short-chain alcohol - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000004194 265.0
DYD1_k127_5803012_7 Cupin superfamily (DUF985) K09705 - - 0.000000000000000000000000000000000000000000000000001014 189.0
DYD1_k127_5803012_9 response to antibiotic - - - 0.0002281 47.0
DYD1_k127_5819149_0 Branched-chain amino acid transport system / permease component - - - 0.0000000000000000000000000000000000000000000000000000000000000000000001186 250.0
DYD1_k127_5819149_1 Short-chain dehydrogenase reductase SDR K00046 - 1.1.1.69 0.000000000000000000000000000000000000000000000000000000000000000002083 235.0
DYD1_k127_5819149_2 Periplasmic binding protein domain K10439 - - 0.000000000000000000000000000000000000000000000000000000000006455 230.0
DYD1_k127_5819149_3 FCD - - - 0.00000000000000000000000000000000000000000000007101 179.0
DYD1_k127_5819149_4 PFAM ABC transporter related K10441 - 3.6.3.17 0.000000000000000000000000000000000000000000003044 169.0
DYD1_k127_5869016_0 TIGRFAM phenylacetate-CoA oxygenase, PaaG subunit K02609 - 1.14.13.149 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001957 521.0
DYD1_k127_5869016_1 Enoyl-CoA hydratase/isomerase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003451 363.0
DYD1_k127_5869016_2 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain K00074,K01782 - 1.1.1.157,1.1.1.35,4.2.1.17,5.1.2.3 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006715 330.0
DYD1_k127_5869016_3 TIGRFAM Phenylacetate-CoA oxygenase, PaaI subunit K02611 - 1.14.13.149 0.0000000000000000000000000000000000000000000000000000000000000000000000000001129 264.0
DYD1_k127_5869016_4 TIGRFAM phenylacetate-CoA oxygenase, PaaJ subunit K02612 - - 0.000000000000000000000000000000000000000000001802 184.0
DYD1_k127_5869016_5 phenylacetic acid degradation K02610 - - 0.00000000000000000000000000000000355 135.0
DYD1_k127_5869016_6 serine threonine protein kinase K08884,K12132 GO:0002237,GO:0003674,GO:0003824,GO:0004672,GO:0004674,GO:0005488,GO:0005539,GO:0005575,GO:0005623,GO:0005886,GO:0006464,GO:0006468,GO:0006793,GO:0006796,GO:0006807,GO:0007154,GO:0007165,GO:0008150,GO:0008152,GO:0009605,GO:0009607,GO:0009617,GO:0009719,GO:0009847,GO:0009987,GO:0010033,GO:0010243,GO:0016020,GO:0016301,GO:0016310,GO:0016740,GO:0016772,GO:0016773,GO:0019538,GO:0023052,GO:0032494,GO:0032502,GO:0036211,GO:0042221,GO:0042834,GO:0043170,GO:0043207,GO:0043412,GO:0044237,GO:0044238,GO:0044260,GO:0044267,GO:0044464,GO:0050789,GO:0050794,GO:0050896,GO:0051704,GO:0051707,GO:0051716,GO:0065007,GO:0070887,GO:0071216,GO:0071219,GO:0071224,GO:0071310,GO:0071417,GO:0071495,GO:0071704,GO:0071944,GO:0097367,GO:0140096,GO:1901564,GO:1901698,GO:1901699,GO:1901700,GO:1901701 2.7.11.1 0.000000000000002137 81.0
DYD1_k127_5870000_0 PFAM ABC transporter related K06147 - - 2.061e-234 740.0
DYD1_k127_5870000_1 Catalyzes the irreversible transfer of a propylamine group from the amino donor S-adenosylmethioninamine (decarboxy- AdoMet) to putrescine (1,4-diaminobutane) to yield spermidine - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001619 334.0
DYD1_k127_5870000_2 spermidine synthase activity - - - 0.000000000000000000000000000000008085 138.0
DYD1_k127_5870000_3 3-beta hydroxysteroid dehydrogenase isomerase - - - 0.0000000001157 63.0
DYD1_k127_5873160_0 PFAM Exonuclease, RNase T and DNA polymerase III K02342,K03722 - 2.7.7.7,3.6.4.12 6.364e-229 727.0
DYD1_k127_5873160_1 DinB superfamily - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000003336 311.0
DYD1_k127_5873160_2 Involved in peptide bond synthesis. Stimulates efficient translation and peptide-bond synthesis on native or reconstituted 70S ribosomes in vitro. Probably functions indirectly by altering the affinity of the ribosome for aminoacyl-tRNA, thus increasing their reactivity as acceptors for peptidyl transferase K02356 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000214 248.0
DYD1_k127_588506_0 SPFH domain / Band 7 family - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009848 362.0
DYD1_k127_588506_1 Involved in the regulation of the intracellular balance of NAD and NADP, and is a key enzyme in the biosynthesis of NADP. Catalyzes specifically the phosphorylation on 2'-hydroxyl of the adenosine moiety of NAD to yield NADP - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003135 323.0
DYD1_k127_588506_2 AMP-binding enzyme C-terminal domain K01897 - 6.2.1.3 0.00000000000000000000000000000000000000000000000000000000000000000007444 248.0
DYD1_k127_588506_3 ABC-2 family transporter protein K01992 - - 0.000000000000000000000000000000004431 130.0
DYD1_k127_5886593_0 modulator of DNA gyrase K03568 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007162 462.0
DYD1_k127_5886593_1 deoxyribonuclease IV (phage-T4-induced) activity K01151 - 3.1.21.2 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000533 365.0
DYD1_k127_5886593_2 PFAM deoxynucleoside kinase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002632 304.0
DYD1_k127_5886593_3 His Kinase A (phosphoacceptor) domain K07636 - 2.7.13.3 0.0000000000000000000000000000000000000000000000000000000002307 221.0
DYD1_k127_5886593_4 peptidase U62, modulator of DNA gyrase - - - 0.0000000000000000000000000000000000000000000000000000000007342 221.0
DYD1_k127_5891035_0 PFAM tRNA synthetase class II (G H P and S) K01892 - 6.1.1.21 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005662 480.0
DYD1_k127_5891035_1 GHMP kinases N terminal domain K01597 - 4.1.1.33 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001135 329.0
DYD1_k127_5891035_2 SMART PDZ DHR GLGF domain protein K11749 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000001433 286.0
DYD1_k127_5891035_3 PBS lyase HEAT domain protein repeat-containing protein - - - 0.0000000000000000000000000000000000000000000000000002228 198.0
DYD1_k127_5891035_4 Lactonase, 7-bladed beta-propeller - - - 0.0000000000000000000000000000000002207 153.0
DYD1_k127_5891035_5 PFAM Formylglycine-generating sulfatase enzyme K18912 - 1.14.99.50 0.0000000000000000000000000000002299 143.0
DYD1_k127_5891035_6 Protein of unknown function (DUF1349) - - - 0.0000000000000000005737 102.0
DYD1_k127_5891035_7 PFAM Bacterial regulatory proteins, lacI family K02529 - - 0.00000000000000003734 95.0
DYD1_k127_5891035_8 bacterial-type flagellum-dependent cell motility - - - 0.000000000001462 80.0
DYD1_k127_5891035_9 WD-40 repeat-containing protein - - - 0.000001525 60.0
DYD1_k127_5905242_0 Participates in initiation and elongation during chromosome replication K02314 - 3.6.4.12 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005739 586.0
DYD1_k127_5905242_1 PFAM IstB domain protein ATP-binding protein K02315 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007249 534.0
DYD1_k127_5905242_2 Bifunctional nuclease K08999 - - 0.000000000000000000000000000000000000000000000000000468 193.0
DYD1_k127_5905242_3 TIGRFAM primosome, DnaD subunit - - - 0.0000000000000000000000000000000001088 145.0
DYD1_k127_5905242_4 CoA binding domain K09181 - - 0.000000000000000000000000009858 116.0
DYD1_k127_5905242_5 diguanylate cyclase - - - 0.0001427 48.0
DYD1_k127_5911039_0 Cytochrome b/b6/petB - - - 2.956e-283 901.0
DYD1_k127_5911039_1 Cytochrome c bacterial - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003273 437.0
DYD1_k127_5911039_2 Sulphur transport K07112 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002875 381.0
DYD1_k127_5911039_3 Sulphur transport K07112 - - 0.00000000000000000000000000000000000000000000000000000000000006773 232.0
DYD1_k127_5925875_0 glycosyltransferase 36 associated K00702,K13688 - 2.4.1.20 0.0 2747.0
DYD1_k127_5942637_0 Glycyl-tRNA synthetase alpha subunit K14164 - 6.1.1.14 0.0 1111.0
DYD1_k127_5942637_1 ATP synthesis coupled electron transport K00336 GO:0003674,GO:0003824,GO:0003954,GO:0005488,GO:0005575,GO:0005618,GO:0005623,GO:0005886,GO:0008150,GO:0008152,GO:0009405,GO:0010941,GO:0016020,GO:0016491,GO:0016651,GO:0030312,GO:0033668,GO:0035821,GO:0042981,GO:0043067,GO:0043069,GO:0044003,GO:0044068,GO:0044403,GO:0044419,GO:0044464,GO:0044531,GO:0044532,GO:0048037,GO:0048519,GO:0048523,GO:0050789,GO:0050794,GO:0051536,GO:0051540,GO:0051701,GO:0051704,GO:0051817,GO:0052040,GO:0052041,GO:0052150,GO:0052248,GO:0052433,GO:0052490,GO:0055114,GO:0060548,GO:0065007,GO:0071944 1.6.5.3 1.508e-297 948.0
DYD1_k127_5942637_10 Catalyzes the last two sequential reactions in the de novo biosynthetic pathway for UDP-N-acetylglucosamine (UDP- GlcNAc). The C-terminal domain catalyzes the transfer of acetyl group from acetyl coenzyme A to glucosamine-1-phosphate (GlcN-1-P) to produce N-acetylglucosamine-1-phosphate (GlcNAc-1-P), which is converted into UDP-GlcNAc by the transfer of uridine 5- monophosphate (from uridine 5-triphosphate), a reaction catalyzed by the N-terminal domain K04042 - 2.3.1.157,2.7.7.23 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000809 485.0
DYD1_k127_5942637_11 PFAM extracellular solute-binding protein, family 5 - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007271 476.0
DYD1_k127_5942637_12 Belongs to the ABC transporter superfamily K02031 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000042 439.0
DYD1_k127_5942637_13 Belongs to the ABC transporter superfamily K02032 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000721 409.0
DYD1_k127_5942637_14 Luciferase-like monooxygenase K04091 - 1.14.14.5 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003237 402.0
DYD1_k127_5942637_15 PFAM binding-protein-dependent transport systems inner membrane component K02033 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001309 360.0
DYD1_k127_5942637_16 NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient. This subunit may bind ubiquinone K00337 GO:0005575,GO:0005623,GO:0005886,GO:0016020,GO:0044464,GO:0071944 1.6.5.3 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001485 357.0
DYD1_k127_5942637_17 PFAM binding-protein-dependent transport systems inner membrane component K02034 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007159 341.0
DYD1_k127_5942637_18 mechanosensitive ion channel K16052 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001646 321.0
DYD1_k127_5942637_19 NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient K00331 - 1.6.5.3 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000001984 285.0
DYD1_k127_5942637_2 Trehalose-phosphatase K16055 - 2.4.1.15,3.1.3.12 5.026e-233 742.0
DYD1_k127_5942637_20 CBS domain containing protein K03699 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000004722 286.0
DYD1_k127_5942637_21 NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient K00338,K05580 - 1.6.5.3 0.00000000000000000000000000000000000000000000000000000000000000000000002279 260.0
DYD1_k127_5942637_22 Involved in DNA repair and RecF pathway recombination K03584 - - 0.00000000000000000000000000000000000000000000000000000000000000000002206 241.0
DYD1_k127_5942637_23 PFAM NADH dehydrogenase (ubiquinone) 24 kDa subunit K00334 - 1.6.5.3 0.000000000000000000000000000000000000000000000000000001254 203.0
DYD1_k127_5942637_24 NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient K00332 - 1.6.5.3 0.000000000000000000000000000000000000000000000000000355 192.0
DYD1_k127_5942637_25 PFAM binding-protein-dependent transport systems inner membrane component K02034 - - 0.00000000000000000000000000000000000000000000000001512 193.0
DYD1_k127_5942637_26 PFAM binding-protein-dependent transport systems inner membrane component K02033 - - 0.0000000000000000000000000000000000000000000000006048 190.0
DYD1_k127_5942637_27 esterase of the alpha-beta hydrolase superfamily K07001 - - 0.00000000000000000000000000000000000000000000006816 181.0
DYD1_k127_5942637_28 This enzyme scavenges exogenous and endogenous cytidine and 2'-deoxycytidine for UMP synthesis K01489 - 3.5.4.5 0.000000000000000000000000000000000000000001191 163.0
DYD1_k127_5942637_29 Belongs to the complex I subunit 6 family K00339 GO:0005575,GO:0005623,GO:0005886,GO:0016020,GO:0044464,GO:0071944 1.6.5.3 0.000000000000000000000000000000000000003512 152.0
DYD1_k127_5942637_3 NADH-Ubiquinone oxidoreductase (complex I) chain 5 L domain protein K00341 - 1.6.5.3 5.148e-228 730.0
DYD1_k127_5942637_30 NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient K00343 - 1.6.5.3 0.000000000000000000000000000000001698 136.0
DYD1_k127_5942637_31 NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient K00340 GO:0003674,GO:0003824,GO:0003954,GO:0005575,GO:0005623,GO:0005886,GO:0008137,GO:0008150,GO:0008152,GO:0016020,GO:0016491,GO:0016651,GO:0016655,GO:0030964,GO:0032991,GO:0044425,GO:0044459,GO:0044464,GO:0045271,GO:0045272,GO:0050136,GO:0055114,GO:0070469,GO:0070470,GO:0071944,GO:0098796,GO:0098797,GO:0098803,GO:1902494,GO:1990204 1.6.5.3 0.0000000000000000000000000000003062 124.0
DYD1_k127_5942637_32 response regulator K10943 - - 0.000000000000003402 87.0
DYD1_k127_5942637_4 Catalyzes the synthesis of beta-nicotinate D- ribonucleotide from nicotinate and 5-phospho-D-ribose 1-phosphate at the expense of ATP K00763 GO:0001666,GO:0003674,GO:0003824,GO:0004516,GO:0005575,GO:0005623,GO:0005886,GO:0006139,GO:0006725,GO:0006732,GO:0006733,GO:0006753,GO:0006793,GO:0006796,GO:0006807,GO:0006950,GO:0008150,GO:0008152,GO:0009058,GO:0009108,GO:0009117,GO:0009165,GO:0009435,GO:0009605,GO:0009607,GO:0009628,GO:0009987,GO:0016020,GO:0016740,GO:0016757,GO:0016763,GO:0016874,GO:0016879,GO:0018130,GO:0019359,GO:0019362,GO:0019363,GO:0019365,GO:0019438,GO:0019637,GO:0019674,GO:0034355,GO:0034641,GO:0034654,GO:0036293,GO:0043094,GO:0043173,GO:0043207,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0044403,GO:0044419,GO:0044464,GO:0046483,GO:0046496,GO:0047280,GO:0050896,GO:0051186,GO:0051188,GO:0051701,GO:0051704,GO:0051707,GO:0055086,GO:0070482,GO:0071704,GO:0071944,GO:0072524,GO:0072525,GO:0075136,GO:0090407,GO:1901293,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576 6.3.4.21 1.684e-226 711.0
DYD1_k127_5942637_5 TIGRFAM proton-translocating NADH-quinone oxidoreductase, chain M K00342 - 1.6.5.3 4.473e-221 696.0
DYD1_k127_5942637_6 NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient K00333 - 1.6.5.3 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002531 610.0
DYD1_k127_5942637_7 NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain K00335 - 1.6.5.3 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001009 587.0
DYD1_k127_5942637_8 RNA polymerase that catalyzes the synthesis of short RNA molecules used as primers for DNA polymerase during DNA replication K02316 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002281 593.0
DYD1_k127_5942637_9 Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released K03086 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000202 505.0
DYD1_k127_5945370_0 AAA ATPase domain - - - 4.79e-226 731.0
DYD1_k127_5948570_0 ATP-dependent serine protease that mediates the selective degradation of mutant and abnormal proteins as well as certain short-lived regulatory proteins. Required for cellular homeostasis and for survival from DNA damage and developmental changes induced by stress. Degrades polypeptides processively to yield small peptide fragments that are 5 to 10 amino acids long. Binds to DNA in a double-stranded, site-specific manner K01338 - 3.4.21.53 2.997e-262 827.0
DYD1_k127_5948570_1 DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates K03046 GO:0000428,GO:0005575,GO:0005622,GO:0005623,GO:0030880,GO:0032991,GO:0044424,GO:0044464,GO:0061695,GO:1902494,GO:1990234 2.7.7.6 2.536e-245 767.0
DYD1_k127_5948570_10 NAD-dependent lysine deacetylase and desuccinylase that specifically removes acetyl and succinyl groups on target proteins. Modulates the activities of several proteins which are inactive in their acylated form K12410 - - 0.00000000000000000000000000000000000000000000000000000000000000003372 231.0
DYD1_k127_5948570_11 PFAM peptidase, membrane zinc metallopeptidase K06973 - - 0.0000000000000000000000000000000000000000000000000000000000002841 219.0
DYD1_k127_5948570_12 Coenzyme A transferase K01028,K01039 - 2.8.3.12,2.8.3.5 0.00000000000000000000000000000000000000000000000005999 188.0
DYD1_k127_5948570_13 The natural substrate for this enzyme may be peptidyl- tRNAs which drop off the ribosome during protein synthesis K01056 GO:0003674,GO:0003824,GO:0004045,GO:0016787,GO:0016788,GO:0052689,GO:0140098,GO:0140101 3.1.1.29 0.00000000000000000000000000000000000000000000000114 190.0
DYD1_k127_5948570_14 Histidine kinase - - - 0.00000000000000000000000000000000000000000000002212 187.0
DYD1_k127_5948570_15 TIGRFAM HAD-superfamily hydrolase, subfamily IA, variant 3 K07025 - - 0.000000000000000000000000000000000000000009088 165.0
DYD1_k127_5948570_16 This is one of the proteins that binds to the 5S RNA in the ribosome where it forms part of the central protuberance K02897 - - 0.0000000000000000000000000000000000002434 149.0
DYD1_k127_5948570_17 NUDIX hydrolase - GO:0003674,GO:0003824,GO:0016787,GO:0016817,GO:0016818 - 0.0000000000000000000000000000000000003961 156.0
DYD1_k127_5948570_18 ubiE/COQ5 methyltransferase family - - - 0.0000000000000000000000000001463 129.0
DYD1_k127_5948570_19 ErfK ybiS ycfS ynhG family protein - - - 0.0000000000000000001889 96.0
DYD1_k127_5948570_2 Couples transcription and DNA repair by recognizing RNA polymerase (RNAP) stalled at DNA lesions. Mediates ATP-dependent release of RNAP and its truncated transcript from the DNA, and recruitment of nucleotide excision repair machinery to the damaged site K03723 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001363 615.0
DYD1_k127_5948570_3 This protein is involved in the repair of mismatches in DNA. It is required for dam-dependent methyl-directed DNA mismatch repair. May act as a molecular matchmaker , a protein that promotes the formation of a stable complex between two or more DNA-binding proteins in an ATP-dependent manner without itself being part of a final effector complex K03572 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001715 582.0
DYD1_k127_5948570_4 protein histidine kinase activity K02484,K07636,K07642 GO:0000155,GO:0000160,GO:0003674,GO:0003824,GO:0004672,GO:0004673,GO:0004721,GO:0005575,GO:0005623,GO:0005886,GO:0006464,GO:0006468,GO:0006470,GO:0006793,GO:0006796,GO:0006807,GO:0006950,GO:0007154,GO:0007165,GO:0008150,GO:0008152,GO:0009267,GO:0009605,GO:0009987,GO:0009991,GO:0016020,GO:0016021,GO:0016036,GO:0016301,GO:0016310,GO:0016311,GO:0016740,GO:0016772,GO:0016773,GO:0016775,GO:0016787,GO:0016788,GO:0016791,GO:0018106,GO:0018193,GO:0018202,GO:0019538,GO:0023014,GO:0023052,GO:0031224,GO:0031667,GO:0031668,GO:0031669,GO:0033554,GO:0035556,GO:0036211,GO:0042578,GO:0042594,GO:0043170,GO:0043412,GO:0044237,GO:0044238,GO:0044260,GO:0044267,GO:0044425,GO:0044464,GO:0046777,GO:0050789,GO:0050794,GO:0050896,GO:0051716,GO:0065007,GO:0071496,GO:0071704,GO:0071944,GO:0140096,GO:1901564 2.7.13.3 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003659 551.0
DYD1_k127_5948570_5 Belongs to the peptidase S41A family K03797 - 3.4.21.102 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003089 477.0
DYD1_k127_5948570_6 Couples transcription and DNA repair by recognizing RNA polymerase (RNAP) stalled at DNA lesions. Mediates ATP-dependent release of RNAP and its truncated transcript from the DNA, and recruitment of nucleotide excision repair machinery to the damaged site K03723 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005797 389.0
DYD1_k127_5948570_7 Acts as a magnesium transporter K06213 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002791 363.0
DYD1_k127_5948570_8 AAA domain K02282 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000001999 302.0
DYD1_k127_5948570_9 Catalyzes the S-adenosyl-L-methionine-dependent formation of N(1)-methyladenine at position 58 (m1A58) in tRNA K07442 - 2.1.1.219,2.1.1.220 0.000000000000000000000000000000000000000000000000000000000000000000000000000001779 270.0
DYD1_k127_5950519_0 The glycine cleavage system catalyzes the degradation of glycine. The P protein binds the alpha-amino group of glycine through its pyridoxal phosphate cofactor K00281,K00283 - 1.4.4.2 1.654e-212 668.0
DYD1_k127_5950519_1 ABC-type branched-chain amino acid transport systems, periplasmic component K01999 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003924 602.0
DYD1_k127_5950519_2 The glycine cleavage system catalyzes the degradation of glycine. The P protein binds the alpha-amino group of glycine through its pyridoxal phosphate cofactor K00282 - 1.4.4.2 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004555 464.0
DYD1_k127_5950519_3 Polysaccharide biosynthesis protein - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001144 441.0
DYD1_k127_5950519_4 The glycine cleavage system catalyzes the degradation of glycine. The H protein shuttles the methylamine group of glycine from the P protein to the T protein K02437 - - 0.0000000000000000000000000000000000000000000004495 170.0
DYD1_k127_5957478_0 Catalyzes the attachment of proline to tRNA(Pro) in a two-step reaction proline is first activated by ATP to form Pro- AMP and then transferred to the acceptor end of tRNA(Pro) K01881 GO:0003674,GO:0003824,GO:0004812,GO:0004827,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006082,GO:0006139,GO:0006399,GO:0006412,GO:0006418,GO:0006433,GO:0006518,GO:0006520,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0016070,GO:0016874,GO:0016875,GO:0017101,GO:0019538,GO:0019752,GO:0032991,GO:0034641,GO:0034645,GO:0034660,GO:0043038,GO:0043039,GO:0043043,GO:0043170,GO:0043436,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044281,GO:0044424,GO:0044464,GO:0046483,GO:0071704,GO:0090304,GO:0140098,GO:0140101,GO:1901360,GO:1901564,GO:1901566,GO:1901576 6.1.1.15 2.864e-235 734.0
DYD1_k127_5957478_1 Involved in mRNA degradation. Catalyzes the phosphorolysis of single-stranded polyribonucleotides processively in the 3'- to 5'-direction K00962 GO:0003674,GO:0003676,GO:0003723,GO:0003729,GO:0003824,GO:0004654,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006139,GO:0006401,GO:0006402,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0009056,GO:0009057,GO:0009892,GO:0009987,GO:0010468,GO:0010605,GO:0010629,GO:0016070,GO:0016071,GO:0016740,GO:0016772,GO:0016779,GO:0019222,GO:0019439,GO:0034641,GO:0034655,GO:0043170,GO:0044237,GO:0044238,GO:0044248,GO:0044260,GO:0044265,GO:0044270,GO:0044424,GO:0044464,GO:0046483,GO:0046700,GO:0048519,GO:0050789,GO:0060255,GO:0065007,GO:0071704,GO:0090304,GO:0097159,GO:1901360,GO:1901361,GO:1901363,GO:1901575 2.7.7.8 1.853e-214 689.0
DYD1_k127_5957478_2 AI-2E family transporter - - - 0.0000000000000000000000000000000000000003552 173.0
DYD1_k127_5957478_3 One of the primary rRNA binding proteins, it binds directly to 16S rRNA where it helps nucleate assembly of the platform of the 30S subunit by binding and bridging several RNA helices of the 16S rRNA K02956 GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0015935,GO:0022626,GO:0022627,GO:0032991,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:1990904 - 0.0000000000000000000000000002156 117.0
DYD1_k127_5957478_5 Protein of unknown function (DUF1679) - - - 0.00000008913 64.0
DYD1_k127_5957478_6 AI-2E family transporter - - - 0.0004452 51.0
DYD1_k127_5973434_0 phosphoglucomutase phosphomannomutase alpha beta alpha domain I K01840 - 5.4.2.8 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006606 332.0
DYD1_k127_5973434_1 Catalyzes the conversion of uracil and 5-phospho-alpha- D-ribose 1-diphosphate (PRPP) to UMP and diphosphate K00761 - 2.4.2.9 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003035 332.0
DYD1_k127_5973434_2 Belongs to the FPP GGPP synthase family K00805,K02523 - 2.5.1.30,2.5.1.90 0.000000000000000000000000000000000000000000000000000000000000000000000000000001041 276.0
DYD1_k127_5973434_3 TatD related DNase K03424 GO:0003674,GO:0003824,GO:0004518,GO:0004536,GO:0006139,GO:0006259,GO:0006308,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0009056,GO:0009057,GO:0009987,GO:0016787,GO:0016788,GO:0019439,GO:0034641,GO:0034655,GO:0043170,GO:0044237,GO:0044238,GO:0044248,GO:0044260,GO:0044265,GO:0044270,GO:0046483,GO:0046700,GO:0071704,GO:0090304,GO:0090305,GO:0140097,GO:1901360,GO:1901361,GO:1901575 - 0.0000000000000000000000000000000000000000000000000000000000000000000000006671 261.0
DYD1_k127_5973434_4 COG0457 FOG TPR repeat - - - 0.000007999 57.0
DYD1_k127_603411_0 it is required for DNA replication and normal SOS inducibility. RecF binds preferentially to single-stranded, linear DNA. It also seems to bind ATP K03629 GO:0000731,GO:0006139,GO:0006259,GO:0006281,GO:0006302,GO:0006725,GO:0006807,GO:0006950,GO:0006974,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0018130,GO:0019438,GO:0033554,GO:0034641,GO:0034645,GO:0034654,GO:0043170,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044271,GO:0046483,GO:0050896,GO:0051716,GO:0071704,GO:0071897,GO:0090304,GO:1901360,GO:1901362,GO:1901576 - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000505 327.0
DYD1_k127_603411_1 Specifically methylates the N7 position of a guanine in 16S rRNA K03501 GO:0000154,GO:0001510,GO:0003674,GO:0003824,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006139,GO:0006364,GO:0006396,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0008168,GO:0008170,GO:0008173,GO:0008649,GO:0008757,GO:0009451,GO:0009987,GO:0010467,GO:0016070,GO:0016072,GO:0016435,GO:0016740,GO:0016741,GO:0022613,GO:0031167,GO:0032259,GO:0034470,GO:0034641,GO:0034660,GO:0036265,GO:0042254,GO:0043170,GO:0043412,GO:0043414,GO:0044085,GO:0044237,GO:0044238,GO:0044260,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0070043,GO:0070475,GO:0070476,GO:0071704,GO:0071840,GO:0090304,GO:0140098,GO:0140102,GO:1901360 2.1.1.170 0.00000000000000000000000000000000000000000000000000000000000000000000000003007 263.0
DYD1_k127_603411_2 4-amino-4-deoxy-L-arabinose transferase activity - - - 0.0000000000000000000000000000000000000000008809 179.0
DYD1_k127_603411_3 L-asparaginase II K01424 - 3.5.1.1 0.0000000000000000000000000002331 118.0
DYD1_k127_6047197_0 Belongs to the PEP-utilizing enzyme family K01006 - 2.7.9.1 0.0 1280.0
DYD1_k127_6047197_1 SUF system FeS assembly protein, NifU family K04488 - - 0.00000000000000000000000000000000000000000000000000004012 190.0
DYD1_k127_6047197_2 Beta-eliminating lyase K11717 - 2.8.1.7,4.4.1.16 0.000000000000000000000000000000000000000006963 156.0
DYD1_k127_6047197_3 PFAM Rieske 2Fe-2S domain protein K00363,K05710 - 1.7.1.15 0.0000000000000000000000000000000006658 139.0
DYD1_k127_6061426_0 CoA-ligase K02381 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000297 546.0
DYD1_k127_6061426_1 Protein of unknown function (DUF1116) - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002447 519.0
DYD1_k127_6061426_2 Amidase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008707 444.0
DYD1_k127_6061426_3 xanthine dehydrogenase activity K03519,K19818 - 1.2.5.3,1.5.99.4 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000005426 283.0
DYD1_k127_6061426_4 [2Fe-2S] binding domain K03518 - 1.2.5.3 0.0000000000000000000000000000000000000000000000000000000000000000000000000004299 258.0
DYD1_k127_6064865_0 PFAM deoxynucleoside kinase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000001129 243.0
DYD1_k127_6064865_1 DNA polymerase III, delta prime subunit K02341 - 2.7.7.7 0.00000000000000000000000000000000000000000000000000000000000000000000229 250.0
DYD1_k127_6064865_2 TIGRFAM DNA polymerase III, delta' subunit K02340 - 2.7.7.7 0.0000000000000000000000000000000000000000007373 170.0
DYD1_k127_6064865_3 PFAM Stage V sporulation protein S K06416 - - 0.0000000000000000000000000004881 116.0
DYD1_k127_6064865_4 - - - - 0.000000000000000000000000002492 120.0
DYD1_k127_6064865_5 Protein of unknown function (DUF1587) - - - 0.0000000000000000000001102 105.0
DYD1_k127_6115850_0 Catalyzes the reversible conversion of 2- phosphoglycerate into phosphoenolpyruvate. It is essential for the degradation of carbohydrates via glycolysis K01689 - 4.2.1.11 1.728e-202 638.0
DYD1_k127_6115850_1 Master enzyme that delivers sulfur to a number of partners involved in Fe-S cluster assembly, tRNA modification or cofactor biosynthesis. Catalyzes the removal of elemental sulfur atoms from cysteine to produce alanine. Functions as a sulfur delivery protein for Fe-S cluster synthesis onto IscU, an Fe-S scaffold assembly protein, as well as other S acceptor proteins K04487 - 2.8.1.7 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001957 441.0
DYD1_k127_6115850_2 Catalyzes the 2-thiolation of uridine at the wobble position (U34) of tRNA, leading to the formation of s(2)U34 K00566 - 2.8.1.13 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000005961 304.0
DYD1_k127_6115850_3 - - - - 0.0000000000000000000002097 102.0
DYD1_k127_6115850_4 gas vesicle protein - - - 0.000000000000000001811 95.0
DYD1_k127_6145308_0 Alcohol dehydrogenase GroES-like domain K00001 - 1.1.1.1 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009954 481.0
DYD1_k127_6145308_1 4Fe-4S binding domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009304 361.0
DYD1_k127_6145308_2 Beta-lactamase K01286 - 3.4.16.4 0.00000000000000000000000000000000000537 152.0
DYD1_k127_6145308_3 - - - - 0.0000000000000000000000472 104.0
DYD1_k127_6145308_4 Protein of unknown function (DUF1624) - - - 0.0000000003193 64.0
DYD1_k127_6145308_5 Imelysin - - - 0.0000003622 52.0
DYD1_k127_6167903_0 Trypsin K04771 - 3.4.21.107 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002163 603.0
DYD1_k127_6167903_1 PFAM molybdopterin oxidoreductase K00123,K05299 - 1.17.1.10,1.17.1.9 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008736 311.0
DYD1_k127_6167903_2 Nucleotidase that shows phosphatase activity on nucleoside 5'-monophosphates K03787 - 3.1.3.5 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002516 305.0
DYD1_k127_6169700_0 TIGRFAM phosphate ABC transporter, inner membrane subunit PstA K02038 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004685 514.0
DYD1_k127_6169700_1 Part of the ABC transporter complex PstSACB involved in phosphate import. Responsible for energy coupling to the transport system K02036 - 3.6.3.27 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005987 386.0
DYD1_k127_6169700_2 phosphoprotein phosphatase activity - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000469 269.0
DYD1_k127_6169700_3 Plays a role in the regulation of phosphate uptake K02039 - - 0.00000000000000000000000003889 118.0
DYD1_k127_6220588_0 Transmembrane secretion effector - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005124 370.0
DYD1_k127_6220588_1 PFAM dienelactone hydrolase K01061 - 3.1.1.45 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004754 325.0
DYD1_k127_6220588_10 - - - - 0.000006092 59.0
DYD1_k127_6220588_2 PFAM Haloacid dehalogenase domain protein hydrolase K07025 - - 0.00000000000000000000000000000000000000000000000000000000009072 222.0
DYD1_k127_6220588_3 Acetyltransferase (GNAT) domain - - - 0.00000000000000000000000000000000000000000000000000000005153 201.0
DYD1_k127_6220588_4 Dna alkylation repair - - - 0.00000000000000000000000000000000000000000000000002055 197.0
DYD1_k127_6220588_5 helix_turn_helix, arabinose operon control protein - - - 0.000000000000000000000000000000000001609 154.0
DYD1_k127_6220588_6 Iron-sulfur cluster-binding domain K22226 - - 0.00000000000000000000008045 110.0
DYD1_k127_6220588_7 Thiopurine S-methyltransferase (TPMT) - - - 0.000000000000000005439 96.0
DYD1_k127_6220588_8 4-amino-4-deoxy-L-arabinose transferase and related glycosyltransferases of PMT family - - - 0.0000000000000005839 92.0
DYD1_k127_6220588_9 FR47-like protein - - - 0.0000000000006156 70.0
DYD1_k127_6230477_0 Domain of unknown function (DUF1998) K06877 - - 6.405e-221 713.0
DYD1_k127_6230477_1 carbon starvation protein CstA K06200 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001467 557.0
DYD1_k127_6230477_10 transporter of a GTP-driven Fe(2 ) uptake system K04759 - - 0.000000000000000000000000000003656 120.0
DYD1_k127_6230477_11 - - - - 0.0000000000000000000002867 99.0
DYD1_k127_6230477_14 - - - - 0.0000000001426 70.0
DYD1_k127_6230477_2 Anion-transporting ATPase K01551 - 3.6.3.16 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002354 471.0
DYD1_k127_6230477_3 Anion-transporting ATPase K01551 - 3.6.3.16 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003749 419.0
DYD1_k127_6230477_4 Catalyzes the NADPH-dependent reduction of ketopantoate into pantoic acid K00077 - 1.1.1.169 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000007381 282.0
DYD1_k127_6230477_5 PFAM intradiol ring-cleavage dioxygenase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000003188 296.0
DYD1_k127_6230477_6 NYN domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000002356 242.0
DYD1_k127_6230477_7 Enoyl-(Acyl carrier protein) reductase K00059 - 1.1.1.100 0.00000000000000000000000000000000000000000000000000000000000000000001318 241.0
DYD1_k127_6230477_8 - - - - 0.000000000000000000000000000000000000004508 147.0
DYD1_k127_6230477_9 LysE type translocator - - - 0.0000000000000000000000000000006112 137.0
DYD1_k127_6290140_0 serine-type peptidase activity - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007701 412.0
DYD1_k127_6290140_1 Two component transcriptional regulator, winged helix family K07667,K07668 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001096 360.0
DYD1_k127_6290140_10 Protein of unknown function (DUF971) - - - 0.00000000000000000000001653 111.0
DYD1_k127_6290140_11 - - - - 0.000000000000001009 85.0
DYD1_k127_6290140_12 Acts as a processive, ATP-dependent zinc metallopeptidase for both cytoplasmic and membrane proteins. Plays a role in the quality control of integral membrane proteins K03798 - - 0.0000000000002788 75.0
DYD1_k127_6290140_2 PFAM von Willebrand factor type A K07114 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005257 342.0
DYD1_k127_6290140_3 Two component transcriptional regulator, LuxR family - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007234 327.0
DYD1_k127_6290140_4 SMART serine threonine protein kinase K12132 - 2.7.11.1 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000002043 300.0
DYD1_k127_6290140_5 SMART protein phosphatase 2C domain protein K20074 - 3.1.3.16 0.0000000000000000000000000000000000000000000000000000000000000000000005376 247.0
DYD1_k127_6290140_6 PFAM Diacylglycerol kinase, catalytic - - - 0.0000000000000000000000000000000000000002612 162.0
DYD1_k127_6290140_7 PFAM Forkhead-associated protein - - - 0.000000000000000000000000000001845 126.0
DYD1_k127_6290140_8 - - - - 0.00000000000000000000000000002623 118.0
DYD1_k127_6290140_9 PQQ-like domain K17713 - - 0.0000000000000000000000003116 108.0
DYD1_k127_6293504_0 teichoic acid transport K01990,K09689,K09691 - 3.6.3.38 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000614 542.0
DYD1_k127_6293504_1 Catalyzes the two-step NADP-dependent conversion of GDP- 4-dehydro-6-deoxy-D-mannose to GDP-fucose, involving an epimerase and a reductase reaction K02377 - 1.1.1.271 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003899 477.0
DYD1_k127_6293504_2 PFAM ABC-2 type transporter K09690 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007198 326.0
DYD1_k127_6307190_0 Heat shock 70 kDa protein K04043 - - 8.225e-227 712.0
DYD1_k127_6307190_1 Amidohydrolase family K06015 - 3.5.1.81 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004062 509.0
DYD1_k127_6307190_10 Conserved hypothetical protein 95 K02687 GO:0003674,GO:0003824,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006464,GO:0006479,GO:0006480,GO:0006807,GO:0008150,GO:0008152,GO:0008168,GO:0008170,GO:0008213,GO:0008276,GO:0008757,GO:0009987,GO:0016278,GO:0016279,GO:0016740,GO:0016741,GO:0018011,GO:0018012,GO:0018022,GO:0018023,GO:0018193,GO:0018194,GO:0018205,GO:0019538,GO:0031365,GO:0032259,GO:0036211,GO:0043170,GO:0043412,GO:0043414,GO:0044237,GO:0044238,GO:0044260,GO:0044267,GO:0044424,GO:0044444,GO:0044464,GO:0071704,GO:0140096,GO:1901564 - 0.0000000000000000000000000000000000000384 164.0
DYD1_k127_6307190_11 One of the essential components for the initiation of protein synthesis. Stabilizes the binding of IF-2 and IF-3 on the 30S subunit to which N-formylmethionyl-tRNA(fMet) subsequently binds. Helps modulate mRNA selection, yielding the 30S pre- initiation complex (PIC). Upon addition of the 50S ribosomal subunit IF-1, IF-2 and IF-3 are released leaving the mature 70S translation initation complex K02518 - - 0.000000000000000000000000000002587 123.0
DYD1_k127_6307190_12 Ribosomal protein S21 K02970 - - 0.0000000000000000004803 91.0
DYD1_k127_6307190_2 Zinc carboxypeptidase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006253 413.0
DYD1_k127_6307190_3 ATP binding to DnaK triggers the release of the substrate protein, thus completing the reaction cycle. Several rounds of ATP-dependent interactions between DnaJ, DnaK and GrpE are required for fully efficient folding. Also involved, together with DnaK and GrpE, in the DNA replication of plasmids through activation of initiation proteins K03686 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001756 388.0
DYD1_k127_6307190_4 Belongs to the ABC transporter superfamily K02032 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003786 347.0
DYD1_k127_6307190_5 TIGRFAM oligopeptide dipeptide ABC transporter, ATPase subunit K02031 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001243 326.0
DYD1_k127_6307190_6 PFAM RNA binding S1 domain protein K02945 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000001417 282.0
DYD1_k127_6307190_7 PFAM binding-protein-dependent transport systems inner membrane component K02033 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000004675 279.0
DYD1_k127_6307190_8 Phosphoribosyl transferase domain K07101 - - 0.000000000000000000000000000000000000000000000000000000000000000000000002043 247.0
DYD1_k127_6307190_9 ABC-type dipeptide oligopeptide nickel transport system, permease component K02034 - - 0.00000000000000000000000000000000000000000000000000000000000000000000001111 252.0
DYD1_k127_6318253_1 Involved in arsenical resistance. Thought to form the channel of an arsenite pump K03893 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001801 340.0
DYD1_k127_6318253_2 Sodium/hydrogen exchanger family K03316 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001288 329.0
DYD1_k127_6318253_3 MaoC like domain - - - 0.000000000000000000000000000000000000000000000006959 179.0
DYD1_k127_6318253_4 Cbs domain - - - 0.000000000000004661 81.0
DYD1_k127_6318253_5 COG1670 Acetyltransferases, including N-acetylases of ribosomal proteins - GO:0003674,GO:0003824,GO:0008080,GO:0016407,GO:0016410,GO:0016740,GO:0016746,GO:0016747 - 0.000000000000009309 74.0
DYD1_k127_631920_0 Pyruvate flavodoxin/ferredoxin oxidoreductase, thiamine diP-bdg K00174 - 1.2.7.11,1.2.7.3 2.24e-238 754.0
DYD1_k127_631920_1 PFAM thiamine pyrophosphate protein domain protein TPP-binding K00175 - 1.2.7.11,1.2.7.3 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003782 456.0
DYD1_k127_631920_2 Belongs to the monovalent cation proton antiporter 2 (CPA2) transporter (TC 2.A.37) family K03455,K03499 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007559 402.0
DYD1_k127_631920_3 TIGRFAM metal dependent phophohydrolase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000007329 273.0
DYD1_k127_631920_4 FCD domain - - - 0.0000000000000000000000000000000000000000000000000000001208 217.0
DYD1_k127_631920_5 DUF218 domain - - - 0.000000000000000000000000000000000000000001202 165.0
DYD1_k127_631920_6 LysM domain - - - 0.0000000000000000000000000000002035 130.0
DYD1_k127_631920_7 diguanylate cyclase - - - 0.0003772 48.0
DYD1_k127_6359870_0 Amidohydrolase family - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001671 526.0
DYD1_k127_6359870_1 Tryptophanyl-tRNA synthetase K01867 - 6.1.1.2 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001204 490.0
DYD1_k127_6359870_10 ribonuclease BN K07058 - - 0.00000000000000000002303 102.0
DYD1_k127_6359870_2 Involved in the biosynthesis of the central metabolite phospho-alpha-D-ribosyl-1-pyrophosphate (PRPP) via the transfer of pyrophosphoryl group from ATP to 1-hydroxyl of ribose-5-phosphate (Rib-5-P) K00948 - 2.7.6.1 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003063 413.0
DYD1_k127_6359870_3 Negative regulator of class I heat shock genes (grpE- dnaK-dnaJ and groELS operons). Prevents heat-shock induction of these operons K03705 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001444 402.0
DYD1_k127_6359870_4 TIGRFAM LAO AO transport system ATPase K07588 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000651 306.0
DYD1_k127_6359870_5 Inner membrane component of T3SS, cytoplasmic domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000003708 263.0
DYD1_k127_6359870_6 PFAM cobalamin B12-binding domain protein K01849 - 5.4.99.2 0.0000000000000000000000000000000000000000000000000000003708 196.0
DYD1_k127_6359870_7 Heat shock 70 kDa protein K04043 - - 0.0000000000000000000000000000000000000000000000009391 177.0
DYD1_k127_6359870_8 Participates actively in the response to hyperosmotic and heat shock by preventing the aggregation of stress-denatured proteins, in association with DnaK and GrpE. It is the nucleotide exchange factor for DnaK and may function as a thermosensor. Unfolded proteins bind initially to DnaJ K03687 - - 0.00000000000000000000000000000000000000000001028 170.0
DYD1_k127_6359870_9 belongs to the thioredoxin family K03671 - - 0.0000000000000000000000000001978 120.0
DYD1_k127_6401441_0 PFAM glycoside hydrolase, family 77 K00705 - 2.4.1.25 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000026 593.0
DYD1_k127_6401441_1 Synthesizes alpha-1,4-glucan chains using ADP-glucose K00703 - 2.4.1.21 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002546 445.0
DYD1_k127_6401441_2 Belongs to the glycosyl hydrolase 57 family K16149 GO:0000271,GO:0003674,GO:0003824,GO:0003844,GO:0005575,GO:0005576,GO:0005975,GO:0005976,GO:0006073,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009250,GO:0009987,GO:0016051,GO:0016740,GO:0016757,GO:0016758,GO:0030978,GO:0030979,GO:0033692,GO:0034637,GO:0034645,GO:0043170,GO:0044042,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044262,GO:0044264,GO:0071704,GO:1901576 2.4.1.18 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000008245 289.0
DYD1_k127_6464255_0 Acetyl-coenzyme A synthetase N-terminus K01895 - 6.2.1.1 2.463e-260 822.0
DYD1_k127_6464255_1 PFAM acyl-CoA dehydrogenase domain protein - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005379 469.0
DYD1_k127_6464255_2 Formiminotransferase-cyclodeaminase K00603,K01746,K13990 - 2.1.2.5,4.3.1.4 0.000000000007023 66.0
DYD1_k127_6464255_3 COG0526 Thiol-disulfide isomerase and thioredoxins - GO:0003674,GO:0003824,GO:0004791,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006950,GO:0006979,GO:0008150,GO:0008152,GO:0009636,GO:0009987,GO:0015035,GO:0015036,GO:0016209,GO:0016491,GO:0016651,GO:0016667,GO:0016668,GO:0016671,GO:0019725,GO:0033554,GO:0034599,GO:0042221,GO:0042592,GO:0044424,GO:0044464,GO:0045454,GO:0047134,GO:0050789,GO:0050794,GO:0050896,GO:0051716,GO:0055114,GO:0065007,GO:0065008,GO:0070887,GO:0097237,GO:0098754,GO:0098869,GO:1990748 - 0.0000001829 55.0
DYD1_k127_6483750_0 PFAM NMT1 THI5 like domain protein K02051 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006789 355.0
DYD1_k127_6483750_1 PFAM binding-protein-dependent transport systems inner membrane component K02050 GO:0003674,GO:0005215,GO:0005575,GO:0005623,GO:0005886,GO:0016020,GO:0044464,GO:0071944 - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000006975 289.0
DYD1_k127_6483750_2 PFAM metallophosphoesterase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000002721 279.0
DYD1_k127_6483750_3 ATPases associated with a variety of cellular activities K02049 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000003401 278.0
DYD1_k127_6483750_4 Domain of unknown function (DUF4349) - - - 0.000000000000000000000000000000000000000000000000000005502 204.0
DYD1_k127_6483750_5 PFAM peptidase M22 glycoprotease K14742 - - 0.0000000000000000000000000000000000000000000000000002388 194.0
DYD1_k127_6483750_6 Threonylcarbamoyl adenosine biosynthesis protein TsaE K06925 - - 0.0000000000000000000000000000000000000000000002212 172.0
DYD1_k127_6483750_7 Ribosomal-protein-alanine acetyltransferase K03789 - 2.3.1.128 0.0000000000000000000000000000000000000000004822 172.0
DYD1_k127_6499880_0 Belongs to the sigma-70 factor family. ECF subfamily - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007803 571.0
DYD1_k127_6499880_1 Psort location Cytoplasmic, score - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000056 491.0
DYD1_k127_6499880_10 Two component regulator propeller - - - 0.000000000000000000000000000000000000000000000001428 193.0
DYD1_k127_6499880_11 signal-transduction protein containing cAMP-binding and CBS domains - - - 0.00000000000000000000000000000000000000000004699 164.0
DYD1_k127_6499880_12 CoA binding domain K06929 - - 0.0000000000000000000000000000000000002669 147.0
DYD1_k127_6499880_13 Protein of unknown function (DUF4230) - - - 0.0000000000000000000000000000004648 132.0
DYD1_k127_6499880_14 His Kinase A (phospho-acceptor) domain K11443 - - 0.00000000000000000000000002331 124.0
DYD1_k127_6499880_15 Major Facilitator Superfamily K08151 - - 0.00000000000000000000002203 115.0
DYD1_k127_6499880_16 COG2197 Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain - - - 0.00000000000000000000008735 102.0
DYD1_k127_6499880_17 Flavodoxin domain K00230 - 1.3.5.3 0.0000000000000000004728 95.0
DYD1_k127_6499880_18 Rhodanese Homology Domain - - - 0.00000000000003866 79.0
DYD1_k127_6499880_19 - - - - 0.00000005178 57.0
DYD1_k127_6499880_2 histidine kinase HAMP region domain protein - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001792 459.0
DYD1_k127_6499880_20 Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain K02479,K07692 - - 0.00003266 51.0
DYD1_k127_6499880_3 Aldo/keto reductase family - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007967 448.0
DYD1_k127_6499880_4 Protein kinase domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006223 404.0
DYD1_k127_6499880_5 histidine kinase A domain protein - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004728 346.0
DYD1_k127_6499880_6 helix_turn_helix, Lux Regulon - - - 0.0000000000000000000000000000000000000000000000000000000000006943 216.0
DYD1_k127_6499880_7 Acyltransferase family - - - 0.000000000000000000000000000000000000000000000000000000000008897 222.0
DYD1_k127_6499880_8 YCII-related domain - - - 0.00000000000000000000000000000000000000000000000000000000101 203.0
DYD1_k127_6499880_9 Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain K07776 GO:0003674,GO:0003676,GO:0003677,GO:0005488,GO:0006355,GO:0008150,GO:0009405,GO:0009889,GO:0010468,GO:0010556,GO:0010565,GO:0019216,GO:0019217,GO:0019219,GO:0019220,GO:0019222,GO:0031323,GO:0031326,GO:0044419,GO:0048583,GO:0050789,GO:0050794,GO:0051171,GO:0051174,GO:0051252,GO:0051704,GO:0060255,GO:0062012,GO:0065007,GO:0080090,GO:0080134,GO:0097159,GO:1901363,GO:1902882,GO:1903506,GO:2000112,GO:2001141 - 0.00000000000000000000000000000000000000000000000000007671 199.0
DYD1_k127_6512202_0 CHAD domain containing protein - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004962 397.0
DYD1_k127_6512202_1 dTDP biosynthetic process K00560,K00943,K01585 GO:0000166,GO:0000287,GO:0001882,GO:0001883,GO:0003674,GO:0003824,GO:0004798,GO:0005488,GO:0005515,GO:0005524,GO:0005525,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006139,GO:0006220,GO:0006221,GO:0006227,GO:0006233,GO:0006235,GO:0006725,GO:0006753,GO:0006793,GO:0006796,GO:0006807,GO:0008144,GO:0008150,GO:0008152,GO:0009041,GO:0009058,GO:0009117,GO:0009123,GO:0009129,GO:0009132,GO:0009133,GO:0009138,GO:0009139,GO:0009141,GO:0009142,GO:0009147,GO:0009148,GO:0009161,GO:0009165,GO:0009173,GO:0009186,GO:0009189,GO:0009196,GO:0009197,GO:0009200,GO:0009202,GO:0009211,GO:0009212,GO:0009218,GO:0009219,GO:0009221,GO:0009259,GO:0009262,GO:0009263,GO:0009265,GO:0009394,GO:0009987,GO:0016301,GO:0016310,GO:0016740,GO:0016772,GO:0016776,GO:0017076,GO:0018130,GO:0019001,GO:0019205,GO:0019438,GO:0019637,GO:0019692,GO:0019693,GO:0030554,GO:0032549,GO:0032550,GO:0032553,GO:0032555,GO:0032559,GO:0032561,GO:0034641,GO:0034654,GO:0035639,GO:0036094,GO:0042802,GO:0042803,GO:0043167,GO:0043168,GO:0043169,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0044424,GO:0044464,GO:0046044,GO:0046072,GO:0046075,GO:0046077,GO:0046385,GO:0046483,GO:0046872,GO:0046940,GO:0046983,GO:0050145,GO:0055086,GO:0071704,GO:0072527,GO:0072528,GO:0090407,GO:0097159,GO:0097367,GO:1901135,GO:1901137,GO:1901265,GO:1901293,GO:1901360,GO:1901362,GO:1901363,GO:1901564,GO:1901566,GO:1901576 2.1.1.45,2.7.4.9,4.1.1.19 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000006964 279.0
DYD1_k127_6512202_2 dTDP biosynthetic process K00943,K01585 GO:0000166,GO:0000287,GO:0001882,GO:0001883,GO:0003674,GO:0003824,GO:0004798,GO:0005488,GO:0005515,GO:0005524,GO:0005525,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006139,GO:0006220,GO:0006221,GO:0006227,GO:0006233,GO:0006235,GO:0006725,GO:0006753,GO:0006793,GO:0006796,GO:0006807,GO:0008144,GO:0008150,GO:0008152,GO:0009041,GO:0009058,GO:0009117,GO:0009123,GO:0009129,GO:0009132,GO:0009133,GO:0009138,GO:0009139,GO:0009141,GO:0009142,GO:0009147,GO:0009148,GO:0009161,GO:0009165,GO:0009173,GO:0009186,GO:0009189,GO:0009196,GO:0009197,GO:0009200,GO:0009202,GO:0009211,GO:0009212,GO:0009218,GO:0009219,GO:0009221,GO:0009259,GO:0009262,GO:0009263,GO:0009265,GO:0009394,GO:0009987,GO:0016301,GO:0016310,GO:0016740,GO:0016772,GO:0016776,GO:0017076,GO:0018130,GO:0019001,GO:0019205,GO:0019438,GO:0019637,GO:0019692,GO:0019693,GO:0030554,GO:0032549,GO:0032550,GO:0032553,GO:0032555,GO:0032559,GO:0032561,GO:0034641,GO:0034654,GO:0035639,GO:0036094,GO:0042802,GO:0042803,GO:0043167,GO:0043168,GO:0043169,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0044424,GO:0044464,GO:0046044,GO:0046072,GO:0046075,GO:0046077,GO:0046385,GO:0046483,GO:0046872,GO:0046940,GO:0046983,GO:0050145,GO:0055086,GO:0071704,GO:0072527,GO:0072528,GO:0090407,GO:0097159,GO:0097367,GO:1901135,GO:1901137,GO:1901265,GO:1901293,GO:1901360,GO:1901362,GO:1901363,GO:1901564,GO:1901566,GO:1901576 2.7.4.9,4.1.1.19 0.0000000000000000000000000000000000000000000000000000000000000000000006478 249.0
DYD1_k127_6512202_3 Exopolyphosphatase K01524 - 3.6.1.11,3.6.1.40 0.00000000000000000000000000000000000000000000000000000000127 222.0
DYD1_k127_6512202_4 phosphohistidine phosphatase, SixA K08296 - - 0.000000000000000000000000000000000003427 147.0
DYD1_k127_6512202_5 Catalyzes the NADPH-dependent reduction of ketopantoate into pantoic acid - - - 0.00002032 48.0
DYD1_k127_6526002_0 PFAM Alcohol dehydrogenase zinc-binding domain protein - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002969 588.0
DYD1_k127_6526002_1 PFAM glycosyl transferase group 1 - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002679 432.0
DYD1_k127_6526002_2 Heparinase II/III-like protein - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003465 387.0
DYD1_k127_6526002_3 PFAM sugar transferase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000002825 295.0
DYD1_k127_6526002_4 methyltransferase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000001622 262.0
DYD1_k127_6526002_5 ATP-grasp domain K01955 - 6.3.5.5 0.000000000000000000000000000000000000000000000000000000000000000007469 238.0
DYD1_k127_6526002_6 SET (Su(var)3-9, Enhancer-of-zeste, Trithorax) domain - - - 0.000000000000000000000000000000000000000000000000000000000000821 216.0
DYD1_k127_6526002_7 TIGRFAM haloacid dehalogenase superfamily, subfamily IA, variant 1 with third motif having Dx(3-4)D or Dx(3-4)E K07025,K08723 - 3.1.3.5 0.0000000000000000000000000000000000000000007718 164.0
DYD1_k127_6526002_8 Methyltransferase domain - - - 0.00000000000000000042 96.0
DYD1_k127_6541145_0 Belongs to the class I-like SAM-binding methyltransferase superfamily. RNA M5U methyltransferase family K03215 - 2.1.1.190 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002532 394.0
DYD1_k127_6541145_1 PFAM aminotransferase class V - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002232 358.0
DYD1_k127_6541145_2 PFAM inositol monophosphatase K01092 - 3.1.3.25 0.00000000000000000000000000000000000000000000000000000000000000000000001661 261.0
DYD1_k127_6541145_3 Response regulator, receiver K02487,K03407,K03413,K06596,K11526,K13490 GO:0003674,GO:0005488,GO:0005515,GO:0019904 2.7.13.3 0.0000000000000000000000000000000000000000000000000000000000000075 227.0
DYD1_k127_6541145_4 Protein of unknown function (DUF2089) - - - 0.0000000000000000000000000000006786 126.0
DYD1_k127_6541145_5 - - - - 0.0000000000001261 82.0
DYD1_k127_6547838_0 PFAM glycosyl transferase, family 35 K00688 - 2.4.1.1 1.648e-294 919.0
DYD1_k127_6547838_1 PTS HPr component phosphorylation site K02768,K08483,K11183 - 2.7.1.202,2.7.3.9 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007736 466.0
DYD1_k127_6547838_10 protein containing SIS (Sugar isomerase) phosphosugar binding domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000002266 253.0
DYD1_k127_6547838_11 PFAM binding-protein-dependent transport systems inner membrane component K02050,K15599 - - 0.000000000000000000000000000000000000000000000000000000000000000002627 237.0
DYD1_k127_6547838_12 Belongs to the DNA glycosylase MPG family K03652 - 3.2.2.21 0.0000000000000000000000000000000000000000000000000001464 202.0
DYD1_k127_6547838_13 PFAM Thiamin pyrophosphokinase, catalytic region K00949 - 2.7.6.2 0.0000000000000000000000000000000000000001549 158.0
DYD1_k127_6547838_14 diguanylate cyclase - - - 0.0000000000000000000000000000000000002002 155.0
DYD1_k127_6547838_15 Protein of unknown function (DUF402) K07586 - - 0.000000000000000000000000000000008492 135.0
DYD1_k127_6547838_16 lactoylglutathione lyase activity K01759 - 4.4.1.5 0.0000000000000000000000000000001809 128.0
DYD1_k127_6547838_17 UPF0316 protein - - - 0.00000000000000000000000000007592 133.0
DYD1_k127_6547838_18 Uncharacterized protein conserved in bacteria (DUF2179) - - - 0.0000000000000000000000003445 115.0
DYD1_k127_6547838_19 PTS HPr component phosphorylation site K11189 - - 0.000000000006684 77.0
DYD1_k127_6547838_2 NAD(P)H-binding K01784 - 5.1.3.2 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001337 434.0
DYD1_k127_6547838_3 Domain of unknown function (DUF4388) - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005916 349.0
DYD1_k127_6547838_4 PFAM Amidohydrolase family K01443 - 3.5.1.25 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002292 329.0
DYD1_k127_6547838_5 Enoyl- acyl-carrier-protein reductase NADH K00208 - 1.3.1.10,1.3.1.9 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004664 319.0
DYD1_k127_6547838_6 TIGRFAM small GTP-binding protein K06945 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003952 308.0
DYD1_k127_6547838_7 PFAM NMT1 THI5 like domain protein - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002054 321.0
DYD1_k127_6547838_8 ATPases associated with a variety of cellular activities - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000034 294.0
DYD1_k127_6547838_9 PFAM LmbE family protein K18455 - 3.5.1.115 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000002272 308.0
DYD1_k127_6567357_0 The UvrABC repair system catalyzes the recognition and processing of DNA lesions. UvrA is an ATPase and a DNA-binding protein. A damage recognition complex composed of 2 UvrA and 2 UvrB subunits scans DNA for abnormalities. When the presence of a lesion has been verified by UvrB, the UvrA molecules dissociate K03701 - - 0.0 1413.0
DYD1_k127_6567357_1 TIGRFAM glutamate synthase (NADPH), homotetrameric K00266 - 1.4.1.13,1.4.1.14 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000607 410.0
DYD1_k127_6567357_2 MacB-like periplasmic core domain K02004 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002394 369.0
DYD1_k127_6567357_3 Psort location CytoplasmicMembrane, score K02003 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000003194 293.0
DYD1_k127_6567357_4 4Fe-4S double cluster binding domain K18979 - 1.17.99.6 0.000000000000000000000000000000000000000000000000000000000000000000000000000000007577 278.0
DYD1_k127_6567357_5 Wd40 repeat-containing protein - - - 0.000000000000000000000000000000000000002008 163.0
DYD1_k127_6567357_6 Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family K02005 - - 0.000000000000000000000000174 122.0
DYD1_k127_6573471_0 Aminotransferase class-V - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001606 530.0
DYD1_k127_6573471_1 Amidinotransferase K01482 - 3.5.3.18 0.0000000000000000000000000000000000000000000000000000000000000000000000000000008158 273.0
DYD1_k127_6573471_10 mRNA catabolic process K06950 - - 0.000000000000253 72.0
DYD1_k127_6573471_2 Bacteriocin-protection, YdeI or OmpD-Associated - - - 0.0000000000000000000000000000000000000000000000000000001017 202.0
DYD1_k127_6573471_3 EamA-like transporter family - - - 0.000000000000000000000000000000000000000000000000001239 193.0
DYD1_k127_6573471_4 Peptidyl-prolyl cis-trans K03775 - 5.2.1.8 0.00000000000000000000000000000000000000000000001298 176.0
DYD1_k127_6573471_5 BioY family K02014,K03523 - - 0.00000000000000000000000000000000000000000000005416 178.0
DYD1_k127_6573471_6 Aminoacyl-tRNA editing domain - - - 0.00000000000000000000000000000000000000001981 167.0
DYD1_k127_6573471_7 FR47-like protein - - - 0.00000000000000000000000000000000001501 147.0
DYD1_k127_6573471_8 thiosulfate sulfurtransferase activity K01011 - 2.8.1.1,2.8.1.2 0.00000000000000000000000000000000002743 154.0
DYD1_k127_6573471_9 Protein of unknown function (DUF1572) - - - 0.0000000000000000421 89.0
DYD1_k127_6601564_0 Nickel-dependent hydrogenase K14126 - 1.8.98.5 7.782e-228 714.0
DYD1_k127_6601564_1 NADH-Ubiquinone oxidoreductase (complex I) chain 5 L domain protein - - - 9.787e-209 663.0
DYD1_k127_6601564_10 Pentapeptide repeats (9 copies) - - - 0.0000000001346 71.0
DYD1_k127_6601564_2 ATP synthesis coupled electron transport K00342,K00343,K05568 - 1.6.5.3 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009511 509.0
DYD1_k127_6601564_3 NADH ubiquinone oxidoreductase, 20 Kd subunit K14128 - 1.8.98.5 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005101 393.0
DYD1_k127_6601564_4 Heterodisulfide reductase subunit A and related polyferredoxins K03388 - 1.8.7.3,1.8.98.4,1.8.98.5,1.8.98.6 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001747 340.0
DYD1_k127_6601564_5 PhoQ Sensor - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000001032 296.0
DYD1_k127_6601564_6 phosphorelay signal transduction system K07670 - - 0.00000000000000000000000000000000000000000000000000000000000000003948 233.0
DYD1_k127_6601564_7 Methyl-viologen-reducing hydrogenase, delta subunit K14127,K14128 - 1.8.98.5,1.8.98.6 0.0000000000000000000000000000000000000000000000000000002154 199.0
DYD1_k127_6601564_8 Belongs to the complex I subunit 6 family K00339 - 1.6.5.3 0.00000000000000000004039 98.0
DYD1_k127_6601564_9 Multisubunit Na H antiporter MnhC subunit K00340,K05567 - 1.6.5.3 0.00000000000000002022 91.0
DYD1_k127_6638736_0 Phosphoglucomutase/phosphomannomutase, C-terminal domain - - - 3.109e-217 685.0
DYD1_k127_6638736_1 The UvrABC repair system catalyzes the recognition and processing of DNA lesions. UvrC both incises the 5' and 3' sides of the lesion. The N-terminal half is responsible for the 3' incision and the C-terminal half is responsible for the 5' incision K03703 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003313 594.0
DYD1_k127_6638736_10 PFAM OsmC family protein K04063 - - 0.0000000000000000000000000000000000000001354 156.0
DYD1_k127_6638736_11 TIGRFAM HAD-superfamily hydrolase, subfamily IA, variant 3 K07025,K20866 - 3.1.3.10 0.0000000000000000000000000000000000000005775 159.0
DYD1_k127_6638736_12 Rab subfamily of small GTPases K07874 - - 0.000000000000000000000000000002695 136.0
DYD1_k127_6638736_13 Acetyltransferase (GNAT) family - - - 0.00000000000000000000000000009721 126.0
DYD1_k127_6638736_14 cheY-homologous receiver domain - - - 0.0000000000000006068 82.0
DYD1_k127_6638736_16 - - - - 0.0000000001382 72.0
DYD1_k127_6638736_2 Carbohydrate kinase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001318 415.0
DYD1_k127_6638736_3 PFAM MOFRL domain protein K11529 - 2.7.1.165 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002671 316.0
DYD1_k127_6638736_4 PFAM diacylglycerol kinase catalytic region - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006287 309.0
DYD1_k127_6638736_5 Major facilitator Superfamily - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000008552 281.0
DYD1_k127_6638736_6 - - - - 0.0000000000000000000000000000000000000000000000000000000000000001111 234.0
DYD1_k127_6638736_7 ATP-grasp domain K01921 - 6.3.2.4 0.000000000000000000000000000000000000000000000000000000001421 227.0
DYD1_k127_6638736_8 PFAM binding-protein-dependent transport systems inner membrane component K02034 - - 0.000000000000000000000000000000000000000000000000000000003988 212.0
DYD1_k127_6638736_9 Helicase conserved C-terminal domain - - - 0.00000000000000000000000000000000000000000007695 179.0
DYD1_k127_6643837_0 TIGRFAM DNA polymerase III, alpha subunit K02337,K14162 - 2.7.7.7 2.399e-256 828.0
DYD1_k127_6643837_1 Methyltransferase type 11 K07755 - 2.1.1.137 0.0000000000000000000000000000000000000000000000000000000000000000000000000003618 264.0
DYD1_k127_6643837_2 Domain of unknown function (DUF4126) - - - 0.0000000000000000000000000000000000000000000000000000000000000000004684 233.0
DYD1_k127_6643837_3 Major intrinsic protein - - - 0.000000000000000000000000000000000000000000000000000000000009265 214.0
DYD1_k127_6643837_4 Nidogen-like - - - 0.0000000000000000000000000000000000000000000000000000001506 212.0
DYD1_k127_6643837_5 Cysteine-rich secretory protein family - - - 0.00000000000000000000000000000000000000001226 164.0
DYD1_k127_6643837_6 Poorly processive, error-prone DNA polymerase involved in untargeted mutagenesis. Copies undamaged DNA at stalled replication forks, which arise in vivo from mismatched or misaligned primer ends. These misaligned primers can be extended by PolIV. Exhibits no 3'-5' exonuclease (proofreading) activity. May be involved in translesional synthesis, in conjunction with the beta clamp from PolIII K02346 - 2.7.7.7 0.000000000000000000000000000000001029 148.0
DYD1_k127_6643837_7 DNA-binding transcription factor activity K03892,K21903 GO:0001067,GO:0003674,GO:0003676,GO:0003677,GO:0005488,GO:0006139,GO:0006351,GO:0006355,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009889,GO:0009987,GO:0010467,GO:0010468,GO:0010556,GO:0016070,GO:0018130,GO:0019219,GO:0019222,GO:0019438,GO:0031323,GO:0031326,GO:0032774,GO:0034641,GO:0034645,GO:0034654,GO:0042221,GO:0043170,GO:0044212,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044271,GO:0046483,GO:0046685,GO:0050789,GO:0050794,GO:0050896,GO:0051171,GO:0051252,GO:0060255,GO:0065007,GO:0071704,GO:0080090,GO:0090304,GO:0097159,GO:0097659,GO:1901360,GO:1901362,GO:1901363,GO:1901576,GO:1903506,GO:2000112,GO:2001141 - 0.0000000000000000000009722 98.0
DYD1_k127_6643837_8 PFAM Uncharacterised BCR, COG1649 - - - 0.00000000000000001886 96.0
DYD1_k127_6718204_0 Allows the formation of correctly charged Gln-tRNA(Gln) through the transamidation of misacylated Glu-tRNA(Gln) in organisms which lack glutaminyl-tRNA synthetase. The reaction takes place in the presence of glutamine and ATP through an activated gamma-phospho-Glu-tRNA(Gln) K02433 - 6.3.5.6,6.3.5.7 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001599 401.0
DYD1_k127_6718204_1 OsmC-like protein K09136 - - 0.00000000000000000000000000000000000000000000001859 177.0
DYD1_k127_6718204_2 Allows the formation of correctly charged Asn-tRNA(Asn) or Gln-tRNA(Gln) through the transamidation of misacylated Asp- tRNA(Asn) or Glu-tRNA(Gln) in organisms which lack either or both of asparaginyl-tRNA or glutaminyl-tRNA synthetases. The reaction takes place in the presence of glutamine and ATP through an activated phospho-Asp-tRNA(Asn) or phospho-Glu-tRNA(Gln) K02435 - 6.3.5.6,6.3.5.7 0.0000000000000000009999 95.0
DYD1_k127_6718204_3 PFAM peptidase S1 and S6 chymotrypsin Hap K04771 - 3.4.21.107 0.0000004861 62.0
DYD1_k127_6765728_0 ATPase, P-type (transporting), HAD superfamily, subfamily IC K01533 - 3.6.3.4 2.576e-283 885.0
DYD1_k127_6765728_1 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster K03388,K12527 - 1.8.7.3,1.8.98.4,1.8.98.5,1.8.98.6,1.97.1.9 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009805 606.0
DYD1_k127_6765728_10 Thi4 family K00313 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002448 385.0
DYD1_k127_6765728_11 PFAM extracellular solute-binding protein, family 5 K02035 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002436 375.0
DYD1_k127_6765728_12 ZIP Zinc transporter - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000018 369.0
DYD1_k127_6765728_13 Belongs to the ABC transporter superfamily K02031,K02032,K13896,K19229,K19230 GO:0000166,GO:0003674,GO:0005215,GO:0005488,GO:0005524,GO:0006810,GO:0006811,GO:0006812,GO:0006813,GO:0008144,GO:0008150,GO:0008324,GO:0008519,GO:0009987,GO:0015075,GO:0015101,GO:0015203,GO:0015489,GO:0015672,GO:0015695,GO:0015696,GO:0015846,GO:0015847,GO:0017076,GO:0022857,GO:0030001,GO:0030554,GO:0032553,GO:0032555,GO:0032559,GO:0034220,GO:0035639,GO:0036094,GO:0043167,GO:0043168,GO:0051179,GO:0051234,GO:0055085,GO:0071702,GO:0071705,GO:0071804,GO:0071805,GO:0072488,GO:0097159,GO:0097367,GO:0098655,GO:0098660,GO:0098662,GO:1901265,GO:1901363,GO:1902047 - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002282 355.0
DYD1_k127_6765728_14 PFAM binding-protein-dependent transport systems inner membrane component K02033 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000128 352.0
DYD1_k127_6765728_15 Peptidoglycan-binding LysM - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004498 346.0
DYD1_k127_6765728_16 Converts 2-succinyl-6-hydroxy-2,4-cyclohexadiene-1- carboxylate (SHCHC) to 2-succinylbenzoate (OSB) - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000143 346.0
DYD1_k127_6765728_17 PFAM acyl-CoA dehydrogenase domain protein K00249 - 1.3.8.7 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001239 339.0
DYD1_k127_6765728_18 Two component transcriptional regulator, winged helix family - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001526 323.0
DYD1_k127_6765728_19 PFAM response regulator receiver K07658 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001086 314.0
DYD1_k127_6765728_2 Amidohydrolase family K01485 - 3.5.4.1 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004012 561.0
DYD1_k127_6765728_20 COG1173 ABC-type dipeptide oligopeptide nickel transport systems, permease components K02034 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004846 312.0
DYD1_k127_6765728_21 PFAM Acetamidase Formamidase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000004057 303.0
DYD1_k127_6765728_22 Component of the ubiquinol-cytochrome c reductase complex (complex III or cytochrome b-c1 complex), which is a respiratory chain that generates an electrochemical potential coupled to ATP synthesis - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000001968 299.0
DYD1_k127_6765728_23 NAD/NADP octopine/nopaline dehydrogenase, alpha-helical domain K04940 - 1.5.1.28 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000006753 285.0
DYD1_k127_6765728_24 Non-canonical ABC transporter that contains transmembrane domains (TMD), which form a pore in the membrane, and an ATP-binding domain (NBD), which is responsible for energy generation. Confers resistance against macrolides K02003 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000004354 283.0
DYD1_k127_6765728_25 ZIP Zinc transporter K07238 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000006671 264.0
DYD1_k127_6765728_26 Oligopeptide/dipeptide transporter, C-terminal region K02032 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000001067 260.0
DYD1_k127_6765728_27 Membrane dipeptidase (Peptidase family M19) K01273 - 3.4.13.19 0.000000000000000000000000000000000000000000000000000000000000000008417 242.0
DYD1_k127_6765728_28 cytochrome c peroxidase K00428 - 1.11.1.5 0.000000000000000000000000000000000000000000000000000000000000000008614 241.0
DYD1_k127_6765728_29 4-amino-4-deoxy-L-arabinose transferase activity K00728 - 2.4.1.109 0.00000000000000000000000000000000000000000000000000000000000000002376 243.0
DYD1_k127_6765728_3 Multicopper oxidase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001874 516.0
DYD1_k127_6765728_30 Creatinase/Prolidase N-terminal domain - - - 0.000000000000000000000000000000000000000000000000000000000001444 224.0
DYD1_k127_6765728_31 Cytochrome C oxidase, cbb3-type, subunit III - - - 0.000000000000000000000000000000000000000000000000000000000002277 228.0
DYD1_k127_6765728_32 peptidase - - - 0.000000000000000000000000000000000000000000000000000000000003476 219.0
DYD1_k127_6765728_33 Transcriptional regulatory protein, C terminal K07667 - - 0.00000000000000000000000000000000000000000000000000000000001181 216.0
DYD1_k127_6765728_34 helix_turn_helix, Lux Regulon - - - 0.00000000000000000000000000000000000000000000000000000000009215 213.0
DYD1_k127_6765728_35 PFAM alkyl hydroperoxide reductase Thiol specific antioxidant Mal allergen - - - 0.00000000000000000000000000000000000000000000000000002683 193.0
DYD1_k127_6765728_36 Electron transfer flavoprotein domain - - - 0.0000000000000000000000000000000000000000000000000004279 198.0
DYD1_k127_6765728_37 MmgE PrpD family protein - - - 0.000000000000000000000000000000000000000000000000004068 199.0
DYD1_k127_6765728_38 Histidine kinase K07777 - 2.7.13.3 0.0000000000000000000000000000000000000000000000005189 198.0
DYD1_k127_6765728_39 histidine kinase A domain protein - - - 0.00000000000000000000000000000000000000000000003365 188.0
DYD1_k127_6765728_4 MacB-like periplasmic core domain K02004 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004635 473.0
DYD1_k127_6765728_40 YceI-like domain - - - 0.000000000000000000000000000000000000000000002212 175.0
DYD1_k127_6765728_41 Transfers the N-acyl diglyceride group on what will become the N-terminal cysteine of membrane lipoproteins K13292 - - 0.000000000000000000000000000000000000000000007419 175.0
DYD1_k127_6765728_42 - - - - 0.0000000000000000000000000000000000000000001281 176.0
DYD1_k127_6765728_43 Electron transfer flavoprotein K03521 - - 0.0000000000000000000000000000000000000000001409 169.0
DYD1_k127_6765728_44 Predicted membrane protein (DUF2085) - - - 0.0000000000000000000000000000000000000000005798 168.0
DYD1_k127_6765728_45 Cytochrome b(C-terminal)/b6/petD - - - 0.000000000000000000000000000000000009753 147.0
DYD1_k127_6765728_46 Rieske [2Fe-2S] domain K02636 - 1.10.9.1 0.00000000000000000000000000000000001441 141.0
DYD1_k127_6765728_47 PFAM cytochrome c biogenesis protein, transmembrane region - - - 0.00000000000000000000000000000000004638 150.0
DYD1_k127_6765728_48 PFAM alkyl hydroperoxide reductase Thiol specific antioxidant Mal allergen - - - 0.000000000000000000000000000000001226 138.0
DYD1_k127_6765728_49 PFAM luciferase-like - - - 0.00000000000000000000000000000001196 143.0
DYD1_k127_6765728_5 Aldehyde dehydrogenase family K00140 - 1.2.1.18,1.2.1.27 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001898 429.0
DYD1_k127_6765728_50 Cytochrome c K00406,K03889,K17222,K19713 GO:0003674,GO:0003824,GO:0005488,GO:0005506,GO:0005507,GO:0005515,GO:0005575,GO:0005623,GO:0005886,GO:0005887,GO:0006091,GO:0006464,GO:0006790,GO:0006807,GO:0008150,GO:0008152,GO:0009055,GO:0009987,GO:0016020,GO:0016021,GO:0016491,GO:0016667,GO:0016669,GO:0016740,GO:0016782,GO:0016783,GO:0018192,GO:0018193,GO:0018198,GO:0018307,GO:0019417,GO:0019538,GO:0020037,GO:0022900,GO:0031224,GO:0031226,GO:0036211,GO:0040007,GO:0042597,GO:0043167,GO:0043169,GO:0043170,GO:0043412,GO:0044237,GO:0044238,GO:0044260,GO:0044267,GO:0044425,GO:0044459,GO:0044464,GO:0046872,GO:0046906,GO:0046914,GO:0046982,GO:0046983,GO:0048037,GO:0055114,GO:0071704,GO:0071944,GO:0097159,GO:0098822,GO:1901363,GO:1901564 1.8.2.2 0.000000000000000000000000000001036 135.0
DYD1_k127_6765728_51 Electron transfer flavoprotein-ubiquinone oxidoreductase, 4Fe-4S K03855 - - 0.000000000000000000000000000006414 125.0
DYD1_k127_6765728_52 FCD K05799 - - 0.00000000000000000000000000001738 129.0
DYD1_k127_6765728_53 Cytochrome C oxidase, cbb3-type, subunit III - - - 0.000000000000000000000000001033 129.0
DYD1_k127_6765728_54 Flavin reductase like domain - - - 0.00000000000000000000000006173 111.0
DYD1_k127_6765728_55 Catalyzes the ATP-dependent transfer of a sulfur to tRNA to produce 4-thiouridine in position 8 of tRNAs, which functions as a near-UV photosensor. Also catalyzes the transfer of sulfur to the sulfur carrier protein ThiS, forming ThiS-thiocarboxylate. This is a step in the synthesis of thiazole, in the thiamine biosynthesis pathway. The sulfur is donated as persulfide by IscS - - - 0.000000000000000000000005079 109.0
DYD1_k127_6765728_57 Major Facilitator Superfamily - - - 0.000000000000000000001812 109.0
DYD1_k127_6765728_58 restriction endodeoxyribonuclease activity - - - 0.000000000000000000332 100.0
DYD1_k127_6765728_59 diguanylate cyclase - - - 0.00000000000000004018 94.0
DYD1_k127_6765728_6 PFAM ABC transporter related K16786,K16787 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005003 409.0
DYD1_k127_6765728_60 Transmembrane (T) component of an energy-coupling factor (ECF) ABC-transporter complex. Unlike classic ABC transporters this ECF transporter provides the energy necessary to transport a number of different substrates K16785 - - 0.00000000000000005885 92.0
DYD1_k127_6765728_61 - - - - 0.00000000000000008774 87.0
DYD1_k127_6765728_62 pfam yhs - - - 0.00000000000000139 81.0
DYD1_k127_6765728_63 membrane protein (DUF2078) K08982 - - 0.0000000000000366 77.0
DYD1_k127_6765728_64 Protein of unknown function (DUF3105) - - - 0.0000000000001439 80.0
DYD1_k127_6765728_65 Barrel-sandwich domain of CusB or HlyD membrane-fusion - - - 0.000000000002947 79.0
DYD1_k127_6765728_67 Tautomerase enzyme K01821 - 5.3.2.6 0.000000000004491 70.0
DYD1_k127_6765728_68 Hydantoin racemase K16841 - 5.1.99.3 0.000000000295 69.0
DYD1_k127_6765728_69 Short C-terminal domain K08982 - - 0.00000001864 59.0
DYD1_k127_6765728_7 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain K02484,K07642 - 2.7.13.3 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001047 399.0
DYD1_k127_6765728_70 - - - - 0.000003509 59.0
DYD1_k127_6765728_72 heavy metal translocating P-type ATPase K17686 - 3.6.3.54 0.0003457 48.0
DYD1_k127_6765728_73 NmrA-like family - - - 0.0006157 48.0
DYD1_k127_6765728_8 protein histidine kinase activity K10819 - 2.7.13.3 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001516 390.0
DYD1_k127_6765728_9 ErfK ybiS ycfS ynhG family protein - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004015 385.0
DYD1_k127_6779059_0 Beta-eliminating lyase - - - 5.8e-204 644.0
DYD1_k127_6779059_1 Branched-chain amino acid transport system / permease component K01998 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003875 588.0
DYD1_k127_6779059_2 Catalyzes the base-exchange of a guanine (G) residue with the queuine precursor 7-aminomethyl-7-deazaguanine (PreQ1) at position 34 (anticodon wobble position) in tRNAs with GU(N) anticodons (tRNA-Asp, -Asn, -His and -Tyr). Catalysis occurs through a double-displacement mechanism. The nucleophile active site attacks the C1' of nucleotide 34 to detach the guanine base from the RNA, forming a covalent enzyme-RNA intermediate. The proton acceptor active site deprotonates the incoming PreQ1, allowing a nucleophilic attack on the C1' of the ribose to form the product. After dissociation, two additional enzymatic reactions on the tRNA convert PreQ1 to queuine (Q), resulting in the hypermodified nucleoside queuosine (7-(((4,5-cis-dihydroxy-2- cyclopenten-1-yl)amino)methyl)-7-deazaguanosine) K00773 - 2.4.2.29 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001809 464.0
DYD1_k127_6779059_3 Branched-chain amino acid transport system / permease component K01997 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000196 428.0
DYD1_k127_6779059_4 Branched-chain amino acid ATP-binding cassette transporter K01995 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007385 377.0
DYD1_k127_6779059_5 Catalyzes the interconversion of L-alanine and D- alanine. May also act on other amino acids K01775 - 5.1.1.1 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002044 372.0
DYD1_k127_6779059_6 ABC transporter K01996 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002133 364.0
DYD1_k127_6779059_7 Catalyzes the dephosphorylation of undecaprenyl diphosphate (UPP). Confers resistance to bacitracin K06153 - 3.6.1.27 0.00000000000000000000000000000000000000000000000000000000000000001717 244.0
DYD1_k127_6779059_8 COGs COG0491 Zn-dependent hydrolase including glyoxylase - - - 0.0000000000000000000000000000000000000000000000000000000000000001685 229.0
DYD1_k127_6786066_0 peptidase dimerisation domain protein - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001124 498.0
DYD1_k127_6786066_1 Pyridoxal-phosphate dependent enzyme K01697,K01738 - 2.5.1.47,4.2.1.22 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002463 499.0
DYD1_k127_6786066_11 Golgi vesicle prefusion complex stabilization K19373 GO:0000301,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005794,GO:0006810,GO:0006890,GO:0006891,GO:0006996,GO:0007030,GO:0008150,GO:0009987,GO:0010256,GO:0012505,GO:0016043,GO:0016192,GO:0017119,GO:0022607,GO:0032991,GO:0034622,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0043933,GO:0044085,GO:0044422,GO:0044424,GO:0044431,GO:0044444,GO:0044446,GO:0044464,GO:0048193,GO:0048213,GO:0051179,GO:0051234,GO:0065003,GO:0071840,GO:0099023 - 0.000001366 59.0
DYD1_k127_6786066_2 Catalyzes the formation of L-homocysteine from O- succinyl-L-homoserine (OSHS) and hydrogen sulfide K01739 GO:0000096,GO:0000097,GO:0003674,GO:0003824,GO:0003962,GO:0004123,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005886,GO:0006082,GO:0006520,GO:0006534,GO:0006555,GO:0006790,GO:0006807,GO:0008150,GO:0008152,GO:0008652,GO:0009058,GO:0009066,GO:0009067,GO:0009069,GO:0009070,GO:0009086,GO:0009092,GO:0009987,GO:0016020,GO:0016053,GO:0016740,GO:0016765,GO:0016829,GO:0016846,GO:0017144,GO:0019279,GO:0019343,GO:0019344,GO:0019752,GO:0043436,GO:0044237,GO:0044238,GO:0044249,GO:0044272,GO:0044281,GO:0044283,GO:0044424,GO:0044444,GO:0044464,GO:0046394,GO:0071265,GO:0071266,GO:0071704,GO:0071944,GO:1901564,GO:1901566,GO:1901576,GO:1901605,GO:1901607 2.5.1.48 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001919 448.0
DYD1_k127_6786066_3 WD40 domain protein beta Propeller K03641 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003996 426.0
DYD1_k127_6786066_4 Metallo-beta-lactamase superfamily - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008443 313.0
DYD1_k127_6786066_5 Threonyl alanyl tRNA synthetase SAD K07050 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004817 308.0
DYD1_k127_6786066_6 heme binding - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000003961 310.0
DYD1_k127_6786066_7 Protein of unknown function (DUF1385) K09153 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000172 259.0
DYD1_k127_6786066_8 Transcriptional activator domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000004401 263.0
DYD1_k127_6786066_9 Belongs to the TtcA family K21947 - 2.8.1.15 0.000000000000000000001827 96.0
DYD1_k127_6786344_0 PFAM UvrD REP helicase K03657 - 3.6.4.12 2.589e-240 767.0
DYD1_k127_6786344_1 TIGRFAM isocitrate dehydrogenase, NADP-dependent K00031 - 1.1.1.42 3.878e-220 690.0
DYD1_k127_6786344_10 peptidase U32 K08303 GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0044424,GO:0044444,GO:0044464 - 0.0000001424 63.0
DYD1_k127_6786344_2 Belongs to the NAD(P)-dependent epimerase dehydratase family K01784 - 5.1.3.2 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001084 392.0
DYD1_k127_6786344_3 Belongs to the UPF0173 family - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004356 344.0
DYD1_k127_6786344_4 FES K10773 - 4.2.99.18 0.000000000000000000000000000000000000000000000000000000000000000000000000000000003205 279.0
DYD1_k127_6786344_5 histidine kinase A domain protein - - - 0.000000000000000000000000000000000000000000001312 184.0
DYD1_k127_6786344_6 PFAM major facilitator superfamily MFS_1 - - - 0.000000000000000000000000000000000001127 156.0
DYD1_k127_6786344_7 Confers DNA tethering and processivity to DNA polymerases and other proteins. Acts as a clamp, forming a ring around DNA (a reaction catalyzed by the clamp-loading complex) which diffuses in an ATP-independent manner freely and bidirectionally along dsDNA. Initially characterized for its ability to contact the catalytic subunit of DNA polymerase III (Pol III), a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria K02338 GO:0005575,GO:0005576,GO:0005618,GO:0005623,GO:0030312,GO:0044464,GO:0071944 2.7.7.7 0.0000000000000000000000000005395 114.0
DYD1_k127_6786344_8 Uncharacterised ACR (DUF711) K09157 - - 0.000000000000000000000000001634 113.0
DYD1_k127_6786344_9 Pfam:DUF385 - - - 0.000000000000000000000004324 106.0
DYD1_k127_6820966_0 pump that utilizes the energy of pyrophosphate hydrolysis as the driving force for K15987 - 3.6.1.1 2.574e-282 889.0
DYD1_k127_6820966_1 Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released K03086 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009588 568.0
DYD1_k127_6820966_10 Receptor family ligand binding region K01999,K11954 - - 0.0001932 53.0
DYD1_k127_6820966_2 - K01992 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003275 410.0
DYD1_k127_6820966_3 PFAM ABC transporter related K01990 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006803 375.0
DYD1_k127_6820966_4 4-amino-4-deoxy-L-arabinose transferase and related glycosyltransferases of PMT family - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000001737 286.0
DYD1_k127_6820966_5 arylsulfatase activity - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000002574 269.0
DYD1_k127_6820966_6 - K01992 - - 0.000000000000000000000000000000000000000000000000000000000000000000003255 257.0
DYD1_k127_6820966_7 Dolichyl-phosphate-mannose-protein mannosyltransferase - - - 0.00000000000000000000000000002884 134.0
DYD1_k127_6820966_8 Domain of unknown function (DUF4340) - - - 0.000003397 56.0
DYD1_k127_6820966_9 4-amino-4-deoxy-L-arabinose transferase activity K14340 - - 0.00008888 55.0
DYD1_k127_6846382_0 PFAM Glycosyl transferase family 2 - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008918 344.0
DYD1_k127_6846382_1 -O-antigen - - - 0.0000000000000000000000000000000000000000000000000000000000000000008018 248.0
DYD1_k127_6846382_2 arylsulfatase activity - - - 0.000000000000000000000000000000000000000000000000000000000004885 229.0
DYD1_k127_6846382_3 PFAM glycosyl transferase family 4 K02851 - 2.7.8.33,2.7.8.35 0.000000000000000000000000000000000000000000000000581 188.0
DYD1_k127_6846382_4 Sulfotransferase family - - - 0.0000000000000000000000000000001929 139.0
DYD1_k127_6846382_5 PFAM Glycosyl transferase, group 1 - - - 0.00000000000000000000000001744 115.0
DYD1_k127_6846382_6 4-amino-4-deoxy-L-arabinose transferase and related glycosyltransferases of PMT family - - - 0.000000000000006897 89.0
DYD1_k127_6846382_7 4-amino-4-deoxy-L-arabinose transferase and related glycosyltransferases of PMT family - - - 0.000001009 60.0
DYD1_k127_6848597_0 Catalyzes the phosphorylation of ribose at O-5 in a reaction requiring ATP and magnesium. The resulting D-ribose-5- phosphate can then be used either for sythesis of nucleotides, histidine, and tryptophan, or as a component of the pentose phosphate pathway K00874 - 2.7.1.45 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001181 468.0
DYD1_k127_6848597_1 Glycoside-hydrolase family GH114 - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008542 336.0
DYD1_k127_6848597_2 cytochrome p450 - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000002793 312.0
DYD1_k127_6848597_3 NADPH quinone reductase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000001329 307.0
DYD1_k127_6848597_4 PFAM KDPG and KHG aldolase K01625 - 4.1.2.14,4.1.3.42 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000473 282.0
DYD1_k127_6848597_5 Bacterial regulatory proteins, crp family K01420 - - 0.000000000000000000000000000000000000000000000000000000003017 208.0
DYD1_k127_6848597_6 OsmC-like protein K09136 - - 0.00000000000000000000000000000000000000000000000004273 186.0
DYD1_k127_68688_0 Amino acid permease - GO:0003333,GO:0003674,GO:0005215,GO:0005342,GO:0005575,GO:0005623,GO:0005886,GO:0005887,GO:0006810,GO:0006811,GO:0006820,GO:0006865,GO:0008150,GO:0008509,GO:0008514,GO:0015075,GO:0015171,GO:0015179,GO:0015291,GO:0015297,GO:0015318,GO:0015711,GO:0015807,GO:0015849,GO:0016020,GO:0016021,GO:0022804,GO:0022857,GO:0031224,GO:0031226,GO:0034220,GO:0044425,GO:0044459,GO:0044464,GO:0046942,GO:0046943,GO:0051179,GO:0051234,GO:0055085,GO:0071702,GO:0071705,GO:0071944,GO:0098656,GO:1902475,GO:1903825,GO:1905039 - 3.511e-291 906.0
DYD1_k127_68688_1 Broad specificity carboxypetidase that releases amino acids sequentially from the C-terminus, including neutral, aromatic, polar and basic residues K01299 - 3.4.17.19 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003487 555.0
DYD1_k127_68688_10 Endonuclease/Exonuclease/phosphatase family - - - 0.000000000000000000001777 98.0
DYD1_k127_68688_11 Protein of unknown function (DUF541) K09807 - - 0.00000000000000000519 93.0
DYD1_k127_68688_12 - - - - 0.0000000000000004736 90.0
DYD1_k127_68688_13 PFAM Endonuclease Exonuclease phosphatase - - - 0.0009165 42.0
DYD1_k127_68688_2 Broad specificity carboxypetidase that releases amino acids sequentially from the C-terminus, including neutral, aromatic, polar and basic residues K01299 - 3.4.17.19 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002902 540.0
DYD1_k127_68688_3 PFAM D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain K00015,K00058,K16843 - 1.1.1.26,1.1.1.310,1.1.1.399,1.1.1.95 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000005927 298.0
DYD1_k127_68688_4 TrkA-C domain K03499 GO:0005575,GO:0005623,GO:0005886,GO:0016020,GO:0044464,GO:0071944 - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000005422 289.0
DYD1_k127_68688_5 TrkA-N domain K03499,K10716 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000005013 261.0
DYD1_k127_68688_6 DHH family - - - 0.0000000000000000000000000000000000000000000000000000000001556 217.0
DYD1_k127_68688_7 PFAM Stage II sporulation E family protein K07315 - 3.1.3.3 0.000000000000000000000000000000000000000000003923 177.0
DYD1_k127_68688_8 phosphorelay signal transduction system - - - 0.000000000000000000000000000219 129.0
DYD1_k127_68688_9 domain, Protein - - - 0.000000000000000000000003046 114.0
DYD1_k127_688934_0 MacB-like periplasmic core domain K02004 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002873 569.0
DYD1_k127_688934_1 Aminotransferase class I and II - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007719 410.0
DYD1_k127_688934_11 sequence-specific DNA binding - - - 0.00004901 49.0
DYD1_k127_688934_2 ABC transporter related K02003 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002629 386.0
DYD1_k127_688934_3 Protein conserved in bacteria - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000546 305.0
DYD1_k127_688934_4 Allows the formation of correctly charged Gln-tRNA(Gln) through the transamidation of misacylated Glu-tRNA(Gln) in organisms which lack glutaminyl-tRNA synthetase. The reaction takes place in the presence of glutamine and ATP through an activated gamma-phospho-Glu-tRNA(Gln) K19837 - 3.5.1.84 0.00000000000000000000000000000000000000000000000000000000000000006379 229.0
DYD1_k127_688934_5 DinB superfamily - - - 0.000000000000000000000000000000000000000000000000417 181.0
DYD1_k127_688934_6 cellulose binding - - - 0.00000000000000000000000000000000000000009893 151.0
DYD1_k127_688934_7 Involved in sulfur transfer in the conversion of molybdopterin precursor Z to molybdopterin - - - 0.000000000000000000000000000000000004867 143.0
DYD1_k127_688934_9 Domain of unknown function (DU1801) - - - 0.0000000007716 68.0
DYD1_k127_6897523_0 helix_turn_helix, Lux Regulon K03556 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001656 632.0
DYD1_k127_6897523_1 (ABC) transporter K06147 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006119 413.0
DYD1_k127_6897523_2 CAAX amino terminal protease family - - - 0.00000000000000000000000000000000125 143.0
DYD1_k127_712894_0 Stage II sporulation E family protein - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009845 551.0
DYD1_k127_712894_1 all-trans-retinol 13,14-reductase activity - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003102 437.0
DYD1_k127_712894_10 antisigma factor binding K04749 - - 0.00000000000000000000006806 102.0
DYD1_k127_712894_12 - - - - 0.0000002116 58.0
DYD1_k127_712894_2 Pyruvate 2-oxoglutarate dehydrogenase complex, dihydrolipoamide dehydrogenase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005346 432.0
DYD1_k127_712894_3 Transcriptional activator domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000001837 247.0
DYD1_k127_712894_5 Histidine kinase - - - 0.0000000000000000000000000000000000000000000000000000000000003949 227.0
DYD1_k127_712894_6 PFAM Cytochrome C - - - 0.000000000000000000000000000000000000000000000000000000000445 212.0
DYD1_k127_712894_8 antisigma factor binding K04749 - - 0.000000000000000000000000000000003075 132.0
DYD1_k127_72584_0 Selenocysteine-specific translation elongation factor K03833 - - 1.834e-201 649.0
DYD1_k127_72584_1 PFAM Amidohydrolase 3 - - - 0.000000000000000000000000000000000000000000000000004321 186.0
DYD1_k127_72584_2 peptidase - - - 0.0000000000000000000000000000000000000000000001124 184.0
DYD1_k127_72584_3 Proton-conducting membrane transporter K05568 - - 0.000009823 59.0
DYD1_k127_766614_0 Part of the ABC transporter complex PotABCD involved in spermidine putrescine import. Responsible for energy coupling to the transport system K11072 - 3.6.3.31 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001287 392.0
DYD1_k127_766614_1 Bacterial extracellular solute-binding protein K11069 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005071 381.0
DYD1_k127_766614_2 PFAM binding-protein-dependent transport systems inner membrane component K11071 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000001153 305.0
DYD1_k127_766614_3 Binding-protein-dependent transport system inner membrane component K11070 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000005307 287.0
DYD1_k127_766614_4 PFAM Gamma-glutamyltranspeptidase K00681 - 2.3.2.2,3.4.19.13 0.000000000000000000000000000000000000000000000000000000000000000000000001189 256.0
DYD1_k127_766614_5 energy transducer activity K03531,K03832 - - 0.000000000000000000000000000000000000000000000000000000000000000000005976 254.0
DYD1_k127_766614_6 sequence-specific DNA binding K03718 - - 0.000000000000000000000000000000000000003318 151.0
DYD1_k127_766614_7 Uncharacterized ACR, COG1430 K09005 - - 0.0001579 50.0
DYD1_k127_783029_0 Periplasmic binding protein domain K02529,K03435,K05499 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002032 350.0
DYD1_k127_783029_1 - - - - 0.000000000000000000000000000000000000000000000000000000000000142 229.0
DYD1_k127_783029_2 - - - - 0.0000000000000000000000000000000000000000008821 167.0
DYD1_k127_783029_3 COG0508 Pyruvate 2-oxoglutarate dehydrogenase complex, dihydrolipoamide acyltransferase (E2) component, and related enzymes - - - 0.0000000000000000000000000000000000009442 159.0
DYD1_k127_783029_4 COG1520 FOG WD40-like repeat - - - 0.00000000000000000000000005322 125.0
DYD1_k127_783029_5 - - - - 0.0000000000000000002714 103.0
DYD1_k127_783029_7 cellulose binding - - - 0.0000000000000002024 92.0
DYD1_k127_783029_8 glyoxalase III activity - - - 0.000000001797 66.0
DYD1_k127_809226_0 NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient K00343 - 1.6.5.3 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008676 365.0
DYD1_k127_809226_1 TIGRFAM dihydroorotate dehydrogenase family protein K17723 - 1.3.1.1 0.000000000000000000000000000000000000000000000000000000000000000000000000000000149 282.0
DYD1_k127_809226_2 Catalyzes the conversion of dihydroorotate to orotate K00226,K17723 - 1.3.1.1,1.3.98.1 0.0000000000000000000000000000000000000000000000000000000000000001797 237.0
DYD1_k127_809226_3 FCD - - - 0.000000000000000000000000000000002945 137.0
DYD1_k127_809226_4 Belongs to the acylphosphatase family K01512 GO:0003674,GO:0003824,GO:0003998,GO:0016787,GO:0016817,GO:0016818 3.6.1.7 0.00000000000000000000001289 105.0
DYD1_k127_850529_0 One of the primary rRNA binding proteins. Required for association of the 30S and 50S subunits to form the 70S ribosome, for tRNA binding and peptide bond formation. It has been suggested to have peptidyltransferase activity K02886 GO:0002181,GO:0003674,GO:0003676,GO:0003723,GO:0003735,GO:0005198,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0006412,GO:0006518,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0015934,GO:0019538,GO:0022625,GO:0022626,GO:0032991,GO:0034641,GO:0034645,GO:0043043,GO:0043170,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:0071704,GO:0097159,GO:1901363,GO:1901564,GO:1901566,GO:1901576,GO:1990904 - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001502 324.0
DYD1_k127_850529_1 Binds the lower part of the 30S subunit head. Binds mRNA in the 70S ribosome, positioning it for translation K02982 GO:0002181,GO:0003674,GO:0003735,GO:0005198,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0006412,GO:0006518,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0015935,GO:0019538,GO:0022626,GO:0022627,GO:0032991,GO:0034641,GO:0034645,GO:0043043,GO:0043170,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:0071704,GO:1901564,GO:1901566,GO:1901576,GO:1990904 - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000001368 280.0
DYD1_k127_850529_10 One of two assembly initiator proteins, it binds directly to the 5'-end of the 23S rRNA, where it nucleates assembly of the 50S subunit K02895 GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0006412,GO:0006518,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0015934,GO:0019538,GO:0022625,GO:0022626,GO:0032991,GO:0034641,GO:0034645,GO:0043043,GO:0043170,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:0071704,GO:1901564,GO:1901566,GO:1901576,GO:1990904 - 0.000000000000000000000000000000000002804 139.0
DYD1_k127_850529_11 The globular domain of the protein is located near the polypeptide exit tunnel on the outside of the subunit, while an extended beta-hairpin is found that lines the wall of the exit tunnel in the center of the 70S ribosome K02890 GO:0003674,GO:0003735,GO:0005198,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0015934,GO:0022625,GO:0022626,GO:0032991,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:1990904 - 0.0000000000000000000000000000000003709 134.0
DYD1_k127_850529_12 Binds 16S rRNA, required for the assembly of 30S particles and may also be responsible for determining the conformation of the 16S rRNA at the A site K02954 GO:0003674,GO:0003735,GO:0005198,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005840,GO:0006412,GO:0006518,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0015935,GO:0019538,GO:0032991,GO:0034641,GO:0034645,GO:0043043,GO:0043170,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044446,GO:0044464,GO:0071704,GO:1901564,GO:1901566,GO:1901576,GO:1990904 - 0.00000000000000000000000949 102.0
DYD1_k127_850529_13 One of the primary rRNA binding proteins, it binds specifically to the 5'-end of 16S ribosomal RNA K02961 - - 0.000000000000001809 79.0
DYD1_k127_850529_14 Ribosomal L29 protein K02904 GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0008150,GO:0015934,GO:0022625,GO:0022626,GO:0032991,GO:0040007,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:1990904 - 0.0000000001983 63.0
DYD1_k127_850529_15 Ribosomal protein L30 K02907 GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0015934,GO:0022625,GO:0022626,GO:0032991,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:1990904 - 0.0001527 46.0
DYD1_k127_850529_2 ribosomal L5P family C-terminus K02931 GO:0000027,GO:0003674,GO:0003676,GO:0003723,GO:0003735,GO:0005198,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0006412,GO:0006518,GO:0006807,GO:0006996,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0015934,GO:0016043,GO:0019538,GO:0022607,GO:0022613,GO:0022618,GO:0022625,GO:0022626,GO:0032991,GO:0034622,GO:0034641,GO:0034645,GO:0042254,GO:0042255,GO:0042273,GO:0043043,GO:0043170,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043603,GO:0043604,GO:0043933,GO:0044085,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:0065003,GO:0070925,GO:0071704,GO:0071826,GO:0071840,GO:0097159,GO:1901363,GO:1901564,GO:1901566,GO:1901576,GO:1990904 - 0.0000000000000000000000000000000000000000000000000000000000000000000000000003939 259.0
DYD1_k127_850529_3 This protein binds to the 23S rRNA, and is important in its secondary structure. It is located near the subunit interface in the base of the L7 L12 stalk, and near the tRNA binding site of the peptidyltransferase center K02933 GO:0002181,GO:0003674,GO:0003676,GO:0003723,GO:0003735,GO:0005198,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0006412,GO:0006518,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0015934,GO:0019538,GO:0022625,GO:0022626,GO:0032991,GO:0034641,GO:0034645,GO:0043043,GO:0043170,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:0071704,GO:0097159,GO:1901363,GO:1901564,GO:1901566,GO:1901576,GO:1990904 - 0.000000000000000000000000000000000000000000000000000000000000001948 222.0
DYD1_k127_850529_4 Located at the back of the 30S subunit body where it stabilizes the conformation of the head with respect to the body K02988 GO:0003674,GO:0003735,GO:0005198,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0006412,GO:0006518,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0015935,GO:0019538,GO:0022626,GO:0022627,GO:0032991,GO:0034641,GO:0034645,GO:0043043,GO:0043170,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:0071704,GO:1901564,GO:1901566,GO:1901576,GO:1990904 - 0.0000000000000000000000000000000000000000000000000000000000001616 216.0
DYD1_k127_850529_5 Binds 23S rRNA and is also seen to make contacts with the A and possibly P site tRNAs K02878 GO:0003674,GO:0003676,GO:0003723,GO:0003735,GO:0005198,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0015934,GO:0019843,GO:0022625,GO:0022626,GO:0032991,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:0097159,GO:1901363,GO:1990904 - 0.00000000000000000000000000000000000000000000000000000000006692 209.0
DYD1_k127_850529_6 Binds to 23S rRNA. Forms part of two intersubunit bridges in the 70S ribosome K02874 GO:0003674,GO:0003676,GO:0003723,GO:0003735,GO:0005198,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0015934,GO:0019843,GO:0022625,GO:0022626,GO:0032991,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:0070180,GO:0097159,GO:1901363,GO:1990904 - 0.000000000000000000000000000000000000000000000000000001119 197.0
DYD1_k127_850529_7 One of the primary rRNA binding proteins, it binds directly to 16S rRNA central domain where it helps coordinate assembly of the platform of the 30S subunit K02994 GO:0003674,GO:0003735,GO:0005198,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0015935,GO:0022626,GO:0022627,GO:0032991,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:1990904 - 0.00000000000000000000000000000000000000000000000000002221 194.0
DYD1_k127_850529_8 Protein S19 forms a complex with S13 that binds strongly to the 16S ribosomal RNA K02965 - - 0.00000000000000000000000000000000000000000002134 162.0
DYD1_k127_850529_9 This is one of the proteins that binds and probably mediates the attachment of the 5S RNA into the large ribosomal subunit, where it forms part of the central protuberance K02881 GO:0003674,GO:0003676,GO:0003723,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0008097,GO:0015934,GO:0019843,GO:0022625,GO:0022626,GO:0032991,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:0097159,GO:1901363,GO:1990904 - 0.000000000000000000000000000000000000000002512 164.0
DYD1_k127_853004_0 PFAM beta-lactamase domain protein - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000002975 278.0
DYD1_k127_853004_1 Catalyzes the NADPH-dependent reduction of ketopantoate into pantoic acid - - - 0.00000000000000000000000000000000000004824 155.0
DYD1_k127_853004_2 Polyphosphate kinase 2 (PPK2) K22468 - 2.7.4.1 0.000000000000000000000000000005019 120.0
DYD1_k127_853004_3 Uncharacterized conserved protein (DUF2277) - - - 0.000000000000000000000000003452 119.0
DYD1_k127_853004_4 Polyketide cyclase / dehydrase and lipid transport - - - 0.0000000000000004993 85.0
DYD1_k127_865478_0 Histidine kinase-like ATPases - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003265 479.0
DYD1_k127_865478_1 FAD dependent oxidoreductase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002649 346.0
DYD1_k127_881143_0 dehydrogenase, E1 component K11381 - 1.2.4.4 3.231e-235 747.0
DYD1_k127_881143_1 Radical SAM - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004589 482.0
DYD1_k127_881143_10 PFAM 4Fe-4S ferredoxin, iron-sulfur binding domain protein - - - 0.000000000000000000000001732 105.0
DYD1_k127_881143_11 exo-alpha-(2->6)-sialidase activity - - - 0.0000000000000000000007449 109.0
DYD1_k127_881143_12 isoprenoid biosynthetic process K13787 - 2.5.1.1,2.5.1.10,2.5.1.29 0.0000000000000002932 90.0
DYD1_k127_881143_13 Cache domain - - - 0.0000000001076 73.0
DYD1_k127_881143_14 TfoX N-terminal domain - - - 0.00001153 49.0
DYD1_k127_881143_2 PFAM Protein kinase domain K12132 - 2.7.11.1 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002804 438.0
DYD1_k127_881143_3 Sigma factor PP2C-like phosphatases K07315 - 3.1.3.3 0.0000000000000000000000000000000000000000000000000000000000000000000000000002598 272.0
DYD1_k127_881143_4 Has an important function as a repair enzyme for proteins that have been inactivated by oxidation. Catalyzes the reversible oxidation-reduction of methionine sulfoxide in proteins to methionine K07304 - 1.8.4.11 0.0000000000000000000000000000000000000000000000000000000000000000000000004577 251.0
DYD1_k127_881143_5 Serine threonine protein kinase K12132 - 2.7.11.1 0.00000000000000000000000000000000000000000000000000000000000000001111 246.0
DYD1_k127_881143_6 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) - - - 0.0000000000000000000000000000000000000000005084 172.0
DYD1_k127_881143_7 helix_turn_helix, Lux Regulon - - - 0.0000000000000000000000000000000000000002691 158.0
DYD1_k127_881143_8 Histidine kinase - - - 0.0000000000000000000000000000000000006843 161.0
DYD1_k127_881143_9 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily - - - 0.0000000000000000000000000000000000006967 143.0
DYD1_k127_886235_0 - - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003652 400.0
DYD1_k127_886235_1 MacB-like periplasmic core domain K02004 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004746 390.0
DYD1_k127_886235_2 Major Facilitator Superfamily - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003445 373.0
DYD1_k127_886235_3 ATPases associated with a variety of cellular activities K02003 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000007485 270.0
DYD1_k127_886235_4 Bacterial protein of unknown function (DUF937) - - - 0.0000000000000000000000000004407 128.0
DYD1_k127_893436_0 A-macroglobulin receptor - - - 0.0 1620.0
DYD1_k127_893436_1 PFAM oxidoreductase domain protein - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001471 585.0
DYD1_k127_893436_10 sh3 domain protein - - - 0.000000000000000000000000000000000000001118 164.0
DYD1_k127_893436_11 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) - - - 0.000000000000000000000000000000002558 151.0
DYD1_k127_893436_12 Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain - - - 0.0000000000000000001721 102.0
DYD1_k127_893436_13 helix_turn_helix, Lux Regulon - - - 0.0000000000000000002728 97.0
DYD1_k127_893436_14 response regulator receiver - - - 0.000000000000000001649 90.0
DYD1_k127_893436_15 Belongs to the P(II) protein family - - - 0.000000000000000006223 89.0
DYD1_k127_893436_2 PFAM sodium hydrogen exchanger - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006713 327.0
DYD1_k127_893436_3 Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000001122 245.0
DYD1_k127_893436_4 response regulator, receiver K07776 GO:0003674,GO:0003676,GO:0003677,GO:0005488,GO:0006355,GO:0008150,GO:0009405,GO:0009889,GO:0010468,GO:0010556,GO:0010565,GO:0019216,GO:0019217,GO:0019219,GO:0019220,GO:0019222,GO:0031323,GO:0031326,GO:0044419,GO:0048583,GO:0050789,GO:0050794,GO:0051171,GO:0051174,GO:0051252,GO:0051704,GO:0060255,GO:0062012,GO:0065007,GO:0080090,GO:0080134,GO:0097159,GO:1901363,GO:1902882,GO:1903506,GO:2000112,GO:2001141 - 0.000000000000000000000000000000000000000000000000000000000000000000002909 242.0
DYD1_k127_893436_5 PFAM response regulator receiver - - - 0.0000000000000000000000000000000000000000000000000000000000000000005383 235.0
DYD1_k127_893436_6 histidine kinase HAMP region domain protein K02484,K07642 - 2.7.13.3 0.0000000000000000000000000000000000000000000000000000000000000002339 235.0
DYD1_k127_893436_7 Histidine kinase - - - 0.00000000000000000000000000000000000000000000000000000000000001604 246.0
DYD1_k127_893436_8 PFAM Nitroreductase - - - 0.0000000000000000000000000000000000000000000000000000000443 211.0
DYD1_k127_893436_9 Histidine kinase K02484 - 2.7.13.3 0.0000000000000000000000000000000000000008675 166.0
DYD1_k127_893626_0 Catalyzes the conversion of urocanate to 4-imidazolone- 5-propionate K01712 - 4.2.1.49 1.699e-307 947.0
DYD1_k127_893626_1 PFAM Phenylalanine and histidine ammonia-lyase K01745,K10775 GO:0003674,GO:0003824,GO:0006082,GO:0006520,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009072,GO:0009698,GO:0009699,GO:0009800,GO:0009803,GO:0009987,GO:0016043,GO:0016053,GO:0016829,GO:0016840,GO:0016841,GO:0019438,GO:0019748,GO:0019752,GO:0022607,GO:0032787,GO:0042537,GO:0043436,GO:0043933,GO:0044085,GO:0044237,GO:0044238,GO:0044249,GO:0044281,GO:0044283,GO:0044550,GO:0045548,GO:0046394,GO:0051259,GO:0051260,GO:0051262,GO:0051289,GO:0065003,GO:0071704,GO:0071840,GO:0072330,GO:1901360,GO:1901362,GO:1901564,GO:1901576 4.3.1.24,4.3.1.3 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005949 434.0
DYD1_k127_893626_2 LysM domain - - - 0.000000000000000000000000000000000000000003711 174.0
DYD1_k127_893626_3 phosphatidylserine decarboxylase K01613 - 4.1.1.65 0.000000000000000000000000000000000000000007752 160.0
DYD1_k127_893626_4 Belongs to the small heat shock protein (HSP20) family K13993 - - 0.000000000000000000000000003817 123.0
DYD1_k127_893626_5 Protein conserved in bacteria K09778 - - 0.000000000000000003713 98.0
DYD1_k127_893626_6 Belongs to the CDP-alcohol phosphatidyltransferase class-I family K17103 - 2.7.8.8 0.000000000000000005912 92.0
DYD1_k127_899175_0 Catalyzes the ATP-dependent amination of UTP to CTP with either L-glutamine or ammonia as the source of nitrogen. Regulates intracellular CTP levels through interactions with the four ribonucleotide triphosphates K01937 - 6.3.4.2 6.583e-270 841.0
DYD1_k127_899175_1 Critical role in recombination and DNA repair. Helps process Holliday junction intermediates to mature products by catalyzing branch migration. Has a DNA unwinding activity characteristic of a DNA helicase with a 3'- to 5'- polarity. Unwinds branched duplex DNA (Y-DNA) K03655 - 3.6.4.12 7.997e-264 838.0
DYD1_k127_899175_10 Asp23 family, cell envelope-related function - - - 0.000000000000000000000000000000001199 133.0
DYD1_k127_899175_11 PFAM Forkhead-associated protein - - - 0.00000000000000000000000000000001502 137.0
DYD1_k127_899175_12 Uncharacterised protein, DegV family COG1307 - - - 0.000000000000000000000000000007635 129.0
DYD1_k127_899175_13 Belongs to the bacterial ribosomal protein bS16 family K02959 GO:0003674,GO:0003735,GO:0005198,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005840,GO:0006412,GO:0006518,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0015935,GO:0019538,GO:0032991,GO:0034641,GO:0034645,GO:0043043,GO:0043170,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044446,GO:0044464,GO:0071704,GO:1901564,GO:1901566,GO:1901576,GO:1990904 - 0.000000000000000000000000009014 119.0
DYD1_k127_899175_14 PFAM Forkhead-associated protein - - - 0.00000000000000000000000004584 123.0
DYD1_k127_899175_15 Archease protein family (MTH1598/TM1083) - - - 0.000000000000000000000002759 107.0
DYD1_k127_899175_16 Belongs to the UPF0109 family K06960 - - 0.0000000000000004671 80.0
DYD1_k127_899175_17 PFAM Forkhead-associated protein - - - 0.0000000000000005169 91.0
DYD1_k127_899175_18 Helix-turn-helix domain - - - 0.000000000000001142 85.0
DYD1_k127_899175_19 Transmembrane secretion effector - - - 0.000000000002821 73.0
DYD1_k127_899175_2 Belongs to the RtcB family K14415 - 6.5.1.3 9.16e-215 680.0
DYD1_k127_899175_20 ribosomal protein L28 K02902 - - 0.0000001027 58.0
DYD1_k127_899175_3 PFAM Dak phosphatase K07030 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002835 574.0
DYD1_k127_899175_4 Belongs to the SEDS family - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001639 547.0
DYD1_k127_899175_5 Catalyzes the reversible phosphorylation of S-methyl-5'- thioadenosine (MTA) to adenine and 5-methylthioribose-1-phosphate. Involved in the breakdown of MTA, a major by-product of polyamine biosynthesis. Responsible for the first step in the methionine salvage pathway after MTA has been generated from S- adenosylmethionine. Has broad substrate specificity with 6- aminopurine nucleosides as preferred substrates K00772 - 2.4.2.28 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002742 383.0
DYD1_k127_899175_6 Reversibly transfers an adenylyl group from ATP to 4'- phosphopantetheine, yielding dephospho-CoA (dPCoA) and pyrophosphate K00954 - 2.7.7.3 0.0000000000000000000000000000000000000000000000000000000000000001368 229.0
DYD1_k127_899175_7 Component of the F(0) channel, it forms part of the peripheral stalk, linking F(1) to F(0) - - - 0.0000000000000000000000000000000000000000000000000000004448 197.0
DYD1_k127_899175_8 PFAM Roadblock LC7 family protein K07131 - - 0.00000000000000000000000000000000000000000004904 163.0
DYD1_k127_899175_9 An accessory protein needed during the final step in the assembly of 30S ribosomal subunit, possibly for assembly of the head region. Probably interacts with S19. Essential for efficient processing of 16S rRNA. May be needed both before and after RbfA during the maturation of 16S rRNA. It has affinity for free ribosomal 30S subunits but not for 70S ribosomes K02860 - - 0.0000000000000000000000000000000002993 140.0
DYD1_k127_90332_0 ABC-type multidrug transport system ATPase component K01990 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001023 392.0
DYD1_k127_90332_1 ABC1 family - - - 0.0000000000000000000000000000000000000000000000003889 189.0
DYD1_k127_90332_2 CAAX protease self-immunity K07052 - - 0.0000000000000000000000000000000000000000000007162 179.0
DYD1_k127_90332_3 N-terminal domain of toast_rack, DUF2154 - - - 0.0000000000000000000000000000003457 137.0
DYD1_k127_90332_4 CAAX protease self-immunity - - - 0.0000000000000000000000000002198 125.0
DYD1_k127_90332_5 - K01992 - - 0.00000000000000000000004873 113.0
DYD1_k127_90332_6 - - - - 0.00000000000002747 84.0
DYD1_k127_915842_0 Polysaccharide biosynthesis protein K02851 - 2.7.8.33,2.7.8.35 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008009 607.0
DYD1_k127_915842_1 PhoQ Sensor K07682 GO:0000166,GO:0000287,GO:0001666,GO:0003032,GO:0003674,GO:0003824,GO:0004672,GO:0004673,GO:0005488,GO:0005509,GO:0005524,GO:0005575,GO:0005618,GO:0005623,GO:0005886,GO:0006464,GO:0006468,GO:0006793,GO:0006796,GO:0006807,GO:0006950,GO:0008144,GO:0008150,GO:0008152,GO:0009593,GO:0009628,GO:0009987,GO:0016020,GO:0016301,GO:0016310,GO:0016740,GO:0016772,GO:0016773,GO:0016775,GO:0017076,GO:0018106,GO:0018193,GO:0018202,GO:0019538,GO:0019825,GO:0019826,GO:0020037,GO:0030312,GO:0030554,GO:0032553,GO:0032555,GO:0032559,GO:0035639,GO:0036094,GO:0036211,GO:0036293,GO:0040007,GO:0042165,GO:0042221,GO:0043167,GO:0043168,GO:0043169,GO:0043170,GO:0043412,GO:0044237,GO:0044238,GO:0044260,GO:0044267,GO:0044464,GO:0046777,GO:0046872,GO:0046906,GO:0048037,GO:0050896,GO:0051606,GO:0051775,GO:0051776,GO:0070025,GO:0070026,GO:0070482,GO:0070483,GO:0071704,GO:0071944,GO:0097159,GO:0097367,GO:0140096,GO:1901265,GO:1901363,GO:1901564 2.7.13.3 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002081 369.0
DYD1_k127_915842_2 L-asparaginase II K01424 - 3.5.1.1 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005328 322.0
DYD1_k127_915842_3 Thiolesterase that catalyzes the hydrolysis of S-D- lactoyl-glutathione to form glutathione and D-lactic acid - - - 0.00000000000000000000000000000000000000000000001141 181.0
DYD1_k127_915842_4 Specifically methylates the N7 position of a guanine in 16S rRNA K03501 GO:0000154,GO:0001510,GO:0003674,GO:0003824,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006139,GO:0006364,GO:0006396,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0008168,GO:0008170,GO:0008173,GO:0008649,GO:0008757,GO:0009451,GO:0009987,GO:0010467,GO:0016070,GO:0016072,GO:0016435,GO:0016740,GO:0016741,GO:0022613,GO:0031167,GO:0032259,GO:0034470,GO:0034641,GO:0034660,GO:0036265,GO:0042254,GO:0043170,GO:0043412,GO:0043414,GO:0044085,GO:0044237,GO:0044238,GO:0044260,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0070043,GO:0070475,GO:0070476,GO:0071704,GO:0071840,GO:0090304,GO:0140098,GO:0140102,GO:1901360 2.1.1.170 0.000000000000000000000000000001096 134.0
DYD1_k127_915842_5 Catalyzes the isomerization of sedoheptulose 7-phosphate in D-glycero-D-manno-heptose 7-phosphate K03271 - 5.3.1.28 0.000000000000000000000000003636 130.0
DYD1_k127_915842_6 Mycobacterial 4 TMS phage holin, superfamily IV K08972 - - 0.0000000000003084 75.0
DYD1_k127_916949_0 A type II topoisomerase that negatively supercoils closed circular double-stranded (ds) DNA in an ATP-dependent manner to modulate DNA topology and maintain chromosomes in an underwound state. Negative supercoiling favors strand separation, and DNA replication, transcription, recombination and repair, all of which involve strand separation. Also able to catalyze the interconversion of other topological isomers of dsDNA rings, including catenanes and knotted rings. Type II topoisomerases break and join 2 DNA strands simultaneously in an ATP-dependent manner K02470 - 5.99.1.3 0.0 1044.0
DYD1_k127_916949_1 Cell wall formation. Adds enolpyruvyl to UDP-N- acetylglucosamine K00790 - 2.5.1.7 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005373 595.0
DYD1_k127_916949_10 amino acid activation for nonribosomal peptide biosynthetic process K12132 - 2.7.11.1 0.0000000000000000000000000000000000000009833 164.0
DYD1_k127_916949_12 Could be involved in insertion of integral membrane proteins into the membrane K08998 - - 0.0000000000000000000000000003684 117.0
DYD1_k127_916949_13 PFAM peptidase M14, carboxypeptidase A - - - 0.000000000000000000000000003538 123.0
DYD1_k127_916949_14 RNaseP catalyzes the removal of the 5'-leader sequence from pre-tRNA to produce the mature 5'-terminus. It can also cleave other RNA substrates such as 4.5S RNA. The protein component plays an auxiliary but essential role in vivo by binding to the 5'-leader sequence and broadening the substrate specificity of the ribozyme K03536 - 3.1.26.5 0.0000000000000001138 85.0
DYD1_k127_916949_15 Ribosomal protein L34 K02914 GO:0003674,GO:0003735,GO:0005198,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0006412,GO:0006518,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0015934,GO:0019538,GO:0022625,GO:0022626,GO:0032991,GO:0034641,GO:0034645,GO:0043043,GO:0043170,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:0071704,GO:1901564,GO:1901566,GO:1901576,GO:1990904 - 0.00000000000002253 74.0
DYD1_k127_916949_16 Alpha/beta hydrolase family - - - 0.00000004946 55.0
DYD1_k127_916949_2 Protein tyrosine kinase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001133 580.0
DYD1_k127_916949_3 Catalyzes the oxidation of 5,10- methylenetetrahydrofolate to 5,10-methenyltetrahydrofolate and then the hydrolysis of 5,10-methenyltetrahydrofolate to 10- formyltetrahydrofolate K01491 GO:0003674,GO:0003824,GO:0004477,GO:0004488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006730,GO:0008150,GO:0008152,GO:0009987,GO:0016491,GO:0016645,GO:0016646,GO:0016787,GO:0016810,GO:0016814,GO:0019238,GO:0044237,GO:0044281,GO:0044424,GO:0044444,GO:0044464,GO:0055114 1.5.1.5,3.5.4.9 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002418 367.0
DYD1_k127_916949_4 PFAM PfkB domain protein - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000007403 275.0
DYD1_k127_916949_5 Iron permease FTR1 family K07243 - - 0.000000000000000000000000000000000000000000000000000000000000000001308 237.0
DYD1_k127_916949_6 PFAM 60 kDa inner membrane insertion protein K03217 - - 0.000000000000000000000000000000000000000000000000000000000000000175 231.0
DYD1_k127_916949_7 PFAM single-stranded nucleic acid binding R3H domain protein K06346 - - 0.00000000000000000000000000000000000000000000000000000000000009794 220.0
DYD1_k127_916949_8 S-adenosyl-l-methionine hydroxide adenosyltransferase K22205 - - 0.00000000000000000000000000000000000000000000000000000000003511 218.0
DYD1_k127_916949_9 PFAM Cobyrinic acid a,c-diamide synthase K03496 - - 0.00000000000000000000000000000000000000000000000000000000005778 216.0
DYD1_k127_931299_0 The beta subunit is responsible for the synthesis of L- tryptophan from indole and L-serine K06001 - 4.2.1.20 1.206e-194 617.0
DYD1_k127_931299_1 peptidase K04774 GO:0005575,GO:0005623,GO:0005886,GO:0006508,GO:0006807,GO:0008150,GO:0008152,GO:0016020,GO:0019538,GO:0043170,GO:0044238,GO:0044464,GO:0071704,GO:0071944,GO:1901564 - 0.00003055 53.0
DYD1_k127_960933_0 damaged site, the DNA wraps around one UvrB monomer. DNA wrap is dependent on ATP binding by UvrB and probably causes local melting of the DNA helix, facilitating insertion of UvrB beta-hairpin between the DNA strands. Then UvrB probes one DNA strand for the presence of a lesion. If a lesion is found the UvrA subunits dissociate and the UvrB-DNA preincision complex is formed. This complex is subsequently bound by UvrC and the second UvrB is released. If no lesion is found, the DNA wraps around the other UvrB subunit that will check the other stand for damage K03702 - - 5.825e-284 886.0
DYD1_k127_960933_1 Cytochrome c oxidase is the component of the respiratory chain that catalyzes the reduction of oxygen to water. Subunits 1- 3 form the functional core of the enzyme complex. CO I is the catalytic subunit of the enzyme. Electrons originating in cytochrome c are transferred via the copper A center of subunit 2 and heme A of subunit 1 to the bimetallic center formed by heme A3 and copper B K02274 - 1.9.3.1 6.603e-218 689.0
DYD1_k127_960933_10 photosynthesis - - - 0.00001949 49.0
DYD1_k127_960933_2 PHP domain protein K02347 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004057 586.0
DYD1_k127_960933_3 SMART phosphoesterase PHP domain protein - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007876 334.0
DYD1_k127_960933_4 PFAM DegV family protein - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000001018 280.0
DYD1_k127_960933_5 Subunits I and II form the functional core of the enzyme complex. Electrons originating in cytochrome c are transferred via heme a and Cu(A) to the binuclear center formed by heme a3 and Cu(B) K02275 GO:0005575,GO:0005623,GO:0005886,GO:0005887,GO:0006091,GO:0006119,GO:0006139,GO:0006163,GO:0006725,GO:0006753,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0009117,GO:0009123,GO:0009126,GO:0009141,GO:0009144,GO:0009150,GO:0009161,GO:0009167,GO:0009199,GO:0009205,GO:0009259,GO:0009319,GO:0009987,GO:0015980,GO:0016020,GO:0016021,GO:0016310,GO:0017144,GO:0019637,GO:0019693,GO:0022900,GO:0022904,GO:0031224,GO:0031226,GO:0032991,GO:0034641,GO:0042773,GO:0044237,GO:0044238,GO:0044281,GO:0044425,GO:0044459,GO:0044464,GO:0045333,GO:0046034,GO:0046483,GO:0055086,GO:0055114,GO:0070069,GO:0071704,GO:0071944,GO:0072521,GO:0098796,GO:1901135,GO:1901360,GO:1901564,GO:1902494 1.9.3.1 0.0000000000000000000000000000000000000000000000000000000000001127 221.0
DYD1_k127_960933_6 Cytochrome c oxidase subunit III K02276,K02299 - 1.9.3.1 0.00000000000000000000000000000000000000000000106 177.0
DYD1_k127_960933_7 PFAM Sulfate transporter antisigma-factor antagonist STAS K04749 - - 0.0000000000000000000000000000001374 126.0
DYD1_k127_960933_8 SMART protein phosphatase 2C domain protein K07315 - 3.1.3.3 0.00000000000000000000000000005618 121.0
DYD1_k127_960933_9 PFAM Sulfate transporter antisigma-factor antagonist STAS K04749,K04757 - 2.7.11.1 0.00000000000000000000000008977 111.0
DYD1_k127_962548_0 Catalyzes the reductive methylation of 2'-deoxyuridine- 5'-monophosphate (dUMP) to 2'-deoxythymidine-5'-monophosphate (dTMP) while utilizing 5,10-methylenetetrahydrofolate (mTHF) as the methyl donor and reductant in the reaction, yielding dihydrofolate (DHF) as a by-product. This enzymatic reaction provides an intracellular de novo source of dTMP, an essential precursor for DNA biosynthesis K00560 - 2.1.1.45 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002681 444.0
DYD1_k127_962548_1 UTRA K03710 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000004218 264.0
DYD1_k127_962548_2 PFAM ComEC Rec2-related protein K02238 - - 0.000000000000000000000000000000000000000000000000000000001475 213.0
DYD1_k127_962548_3 Key enzyme in folate metabolism. Catalyzes an essential reaction for de novo glycine and purine synthesis, and for DNA precursor synthesis K00287,K18589 - 1.5.1.3 0.00000000000000000000000000000000000000971 153.0
DYD1_k127_9999_0 PFAM band 7 protein - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001306 328.0
DYD1_k127_9999_1 Protein of unknown function (DUF554) K07150 - - 0.000000000000000000000000000000000000000000000000000000000000000000000002928 253.0
DYD1_k127_9999_2 DSBA-like thioredoxin domain - - - 0.00000000000000000000000000000000000000002059 162.0
DYD1_k127_9999_3 sequence-specific DNA binding - - - 0.00000000000000000000000000000000001866 143.0
DYD1_k127_9999_4 PFAM GCN5-related N-acetyltransferase - - - 0.000000000000000001493 99.0
DYD1_k127_9999_5 peptidyl-tyrosine sulfation - - - 0.000000000000005789 82.0
DYD1_k127_9999_6 Cobalamin adenosyltransferase K00798 - 2.5.1.17 0.000000001409 60.0
DYD1_k127_9999_7 Transcriptional regulatory protein, C terminal K07667 - - 0.000001286 50.0