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Overview

ID MAG00855
Name DYD1_bin.35
Sample SMP0025
Taxonomy
Kingdom Bacteria
Phylum Acidobacteriota
Class Blastocatellia
Order Pyrinomonadales
Family Pyrinomonadaceae
Genus PSRF01
Species
Assembly information
Completeness (%) 92.5
Contamination (%) 3.26
GC content (%) 56.0
N50 (bp) 8,152
Genome size (bp) 3,734,960

Location

Module

Module ID Module name Total genes Total steps Contain genes Contain steps Percentage of genes Percentage of steps

Genes3185

Gene name Description KEGG GOs EC E-value Score Sequence
DYD1_k127_1009032_0 homolog of phage Mu protein gp47 - - - 0.00000000000000000000000000000000000000000000000000000000000000000001091 256.0
DYD1_k127_1009032_1 protein conserved in bacteria - - - 0.0000000000000000000000000000000000000000000298 170.0
DYD1_k127_1009032_3 Late control gene D protein - - - 0.00000000000000000000000000002337 130.0
DYD1_k127_1009032_4 GPW Gp25 family protein - - - 0.0000000000000000000000000001714 123.0
DYD1_k127_1009032_6 - - - - 0.0001741 52.0
DYD1_k127_1012180_0 Acyl transferase domain in polyketide synthase (PKS) enzymes. - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000307 578.0
DYD1_k127_1012180_1 Cytochrome P450 - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004898 334.0
DYD1_k127_1012180_2 B12 binding domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000003532 255.0
DYD1_k127_1012180_3 Acyl transferase domain - - - 0.0000000000000000003167 92.0
DYD1_k127_1040399_0 Belongs to the PstS family K02040 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000727 423.0
DYD1_k127_1040399_1 probably responsible for the translocation of the substrate across the membrane K02037 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004615 336.0
DYD1_k127_1040399_2 Phosphate transport system permease K02038 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000009867 298.0
DYD1_k127_1040399_3 TonB-dependent Receptor Plug Domain - - - 0.00000000000002628 76.0
DYD1_k127_1040399_4 Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain K07776 GO:0003674,GO:0003676,GO:0003677,GO:0005488,GO:0006355,GO:0008150,GO:0009405,GO:0009889,GO:0010468,GO:0010556,GO:0010565,GO:0019216,GO:0019217,GO:0019219,GO:0019220,GO:0019222,GO:0031323,GO:0031326,GO:0044419,GO:0048583,GO:0050789,GO:0050794,GO:0051171,GO:0051174,GO:0051252,GO:0051704,GO:0060255,GO:0062012,GO:0065007,GO:0080090,GO:0080134,GO:0097159,GO:1901363,GO:1902882,GO:1903506,GO:2000112,GO:2001141 - 0.0000000006938 64.0
DYD1_k127_1073790_0 Part of a heterotetrameric complex that catalyzes the two-step biosynthesis of anthranilate, an intermediate in the biosynthesis of L-tryptophan. In the first step, the glutamine- binding beta subunit (TrpG) of anthranilate synthase (AS) provides the glutamine amidotransferase activity which generates ammonia as a substrate that, along with chorismate, is used in the second step, catalyzed by the large alpha subunit of AS (TrpE) to produce anthranilate. In the absence of TrpG, TrpE can synthesize anthranilate directly from chorismate and high concentrations of ammonia K01657,K13503 - 4.1.3.27 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002681 448.0
DYD1_k127_1073790_1 Catalyzes the transfer of the phosphoribosyl group of 5- phosphorylribose-1-pyrophosphate (PRPP) to anthranilate to yield N-(5'-phosphoribosyl)-anthranilate (PRA) K00766,K13497 - 2.4.2.18,4.1.3.27 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008907 312.0
DYD1_k127_1073790_10 PPIases accelerate the folding of proteins. It catalyzes the cis-trans isomerization of proline imidic peptide bonds in oligopeptides K01802,K03767,K03768 - 5.2.1.8 0.0000000000000000000000000000001328 135.0
DYD1_k127_1073790_2 Inositol monophosphatase family K01092,K05602 - 3.1.3.15,3.1.3.25 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000002025 303.0
DYD1_k127_1073790_3 oxidoreductase activity, acting on CH-OH group of donors K13237 - 1.3.1.34 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000001358 291.0
DYD1_k127_1073790_4 with TrpE catalyzes the formation of anthranilate and glutamate from chorismate and glutamine K01664 GO:0000162,GO:0003674,GO:0003824,GO:0004049,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005950,GO:0006082,GO:0006520,GO:0006568,GO:0006575,GO:0006576,GO:0006586,GO:0006725,GO:0006732,GO:0006760,GO:0006807,GO:0008150,GO:0008152,GO:0008483,GO:0008652,GO:0009058,GO:0009072,GO:0009073,GO:0009108,GO:0009308,GO:0009309,GO:0009396,GO:0009987,GO:0016053,GO:0016740,GO:0016769,GO:0016829,GO:0016830,GO:0016833,GO:0018130,GO:0019438,GO:0019752,GO:0032991,GO:0034641,GO:0042398,GO:0042401,GO:0042430,GO:0042435,GO:0042558,GO:0042559,GO:0043436,GO:0043603,GO:0043604,GO:0044106,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0044283,GO:0044424,GO:0044444,GO:0044464,GO:0046219,GO:0046394,GO:0046483,GO:0046653,GO:0046654,GO:0046820,GO:0051186,GO:0051188,GO:0071704,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576,GO:1901605,GO:1901607,GO:1902494 2.6.1.85 0.000000000000000000000000000000000000000000000000000000000000000000000000000000004839 273.0
DYD1_k127_1073790_5 belongs to the PRA-CH family K01496,K11755 - 3.5.4.19,3.6.1.31 0.000000000000000000000000000000000000000000000000000000000000000000000000006027 260.0
DYD1_k127_1073790_6 IGPS catalyzes the conversion of PRFAR and glutamine to IGP, AICAR and glutamate. The HisF subunit catalyzes the cyclization activity that produces IGP and AICAR from PRFAR using the ammonia provided by the HisH subunit K02500 GO:0000105,GO:0000162,GO:0003674,GO:0003824,GO:0003949,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006082,GO:0006520,GO:0006547,GO:0006568,GO:0006576,GO:0006586,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0008652,GO:0009058,GO:0009072,GO:0009073,GO:0009308,GO:0009309,GO:0009987,GO:0016053,GO:0016853,GO:0016860,GO:0016861,GO:0018130,GO:0019438,GO:0019752,GO:0034641,GO:0042401,GO:0042430,GO:0042435,GO:0043436,GO:0044106,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0044283,GO:0044424,GO:0044464,GO:0046219,GO:0046394,GO:0046483,GO:0052803,GO:0071704,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576,GO:1901605,GO:1901607 - 0.00000000000000000000000000000000000000000000000000000000000000000000002785 245.0
DYD1_k127_1073790_7 Belongs to the TrpC family K01609,K13498 - 4.1.1.48,5.3.1.24 0.0000000000000000000000000000000000000000000000000000000000000001815 229.0
DYD1_k127_1073790_8 1-(5-phosphoribosyl)-5- (5-phosphoribosylamino)methylideneamino imidazole-4-carboxamide isomerase K01814,K01817 - 5.3.1.16,5.3.1.24 0.0000000000000000000000000000000000000000000000000000000000001713 220.0
DYD1_k127_1073790_9 Belongs to the TrpF family K01817 - 5.3.1.24 0.000000000000000000000000000000005176 132.0
DYD1_k127_1076904_0 Belongs to the prokaryotic molybdopterin-containing oxidoreductase family - - - 4.536e-278 872.0
DYD1_k127_1076904_1 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase - - - 0.000000000000000000000000000000000000000000000001343 183.0
DYD1_k127_1091695_0 Pyridoxal-phosphate dependent enzyme K01733 - 4.2.3.1 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006915 351.0
DYD1_k127_1091695_1 Tetratricopeptide repeat - - - 0.00000000000000000000000000000000001477 151.0
DYD1_k127_1091695_2 type I phosphodiesterase nucleotide pyrophosphatase - - - 0.0000000000000000000000000003974 128.0
DYD1_k127_1091695_3 Pyridoxal-phosphate dependent enzyme K01733 - 4.2.3.1 0.000000000000000000001312 96.0
DYD1_k127_1100318_0 phosphoesterase, PA-phosphatase related - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001122 529.0
DYD1_k127_1100318_1 Membrane - - - 0.000000000000000000000000000000000000000000000000002282 204.0
DYD1_k127_1103351_0 Periplasmic binding proteins and sugar binding domain of LacI family K10439,K10552 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002513 429.0
DYD1_k127_1103351_1 Branched-chain amino acid transport system / permease component K10440,K10553 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002094 364.0
DYD1_k127_1103417_0 Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain K11177 - 1.17.1.4 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005712 496.0
DYD1_k127_1103417_1 Catalyzes the condensation of (S)-aspartate-beta- semialdehyde (S)-ASA and pyruvate to 4-hydroxy- tetrahydrodipicolinate (HTPA) K01707 - 4.2.1.41 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004002 311.0
DYD1_k127_1103417_2 CO dehydrogenase flavoprotein C-terminal domain K11178 - 1.17.1.4 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000205 297.0
DYD1_k127_1103417_3 Cysteine-rich domain K18928 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000005732 274.0
DYD1_k127_1103417_4 TIGRFAM iron-sulfur cluster binding protein K18929 - - 0.00000000000000000000000000000000000000000000000000000000000000000000001055 249.0
DYD1_k127_1103417_5 2Fe-2S -binding K13483 - - 0.00000000000000000000000000000000000000000000000000000000002504 212.0
DYD1_k127_1103417_6 Belongs to the alpha-IPM synthase homocitrate synthase family K01649 - 2.3.3.13 0.00000000000000000000000000000000000000005799 160.0
DYD1_k127_1103417_7 Protein of unknown function (DUF1326) - - - 0.0000000000000000000001584 106.0
DYD1_k127_1104153_0 DeoC/LacD family aldolase K11645 - 4.1.2.13 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003172 401.0
DYD1_k127_1104153_1 Belongs to the sigma-70 factor family. ECF subfamily K03088 - - 0.0000000000000000000000000000000000000000000359 167.0
DYD1_k127_1104153_2 Anti-sigma-K factor rskA - - - 0.000000000000000000008682 101.0
DYD1_k127_1115643_0 Catalyzes the reversible cleavage of pseudouridine 5'- phosphate (PsiMP) to ribose 5-phosphate and uracil. Functions biologically in the cleavage direction, as part of a pseudouridine degradation pathway K16329 - 4.2.1.70 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000003097 287.0
DYD1_k127_1115643_1 signal transduction histidine kinase - - - 0.000000000000000000003822 108.0
DYD1_k127_1115643_2 His Kinase A (phosphoacceptor) domain - - - 0.0000000002619 73.0
DYD1_k127_1139504_0 Belongs to the PEP-utilizing enzyme family K01006 - 2.7.9.1 0.0 1117.0
DYD1_k127_1139504_1 Acts as a magnesium transporter K06213 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004542 365.0
DYD1_k127_117942_0 Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released. This sigma factor is the primary sigma factor during exponential growth K03086 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000122 512.0
DYD1_k127_117942_1 Catalyzes the conversion of glucosamine-6-phosphate to glucosamine-1-phosphate K03431 - 5.4.2.10 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003043 409.0
DYD1_k127_117942_10 domain protein - - - 0.0004547 51.0
DYD1_k127_117942_2 RNA polymerase that catalyzes the synthesis of short RNA molecules used as primers for DNA polymerase during DNA replication K02316 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005736 360.0
DYD1_k127_117942_3 Adenylyl- / guanylyl cyclase, catalytic domain K01768 - 4.6.1.1 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000809 297.0
DYD1_k127_117942_4 Catalyzes the conversion of 3-deoxy-D-arabino- heptulosonate 7-phosphate (DAHP) to dehydroquinate (DHQ) K01735 - 4.2.3.4 0.000000000000000000000000000000000000000000000000000000000000000000000000000007287 274.0
DYD1_k127_117942_5 Actin K03569 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000034 268.0
DYD1_k127_117942_6 Catalyzes the condensation of 2 ATP molecules into cyclic di-AMP (c-di-AMP), a second messenger used to regulate differing processes in different bacteria K18672 - 2.7.7.85 0.000000000000000000000000000000000000000000000000000000000003404 218.0
DYD1_k127_117942_7 Belongs to the peptidase M50B family - - - 0.00000000000000000000000000000000000000000000000000003071 203.0
DYD1_k127_117942_8 YbbR-like protein - - - 0.00000000000000008959 91.0
DYD1_k127_117942_9 Endonuclease that is involved in the suppression of homologous recombination and may therefore have a key role in the control of bacterial genetic diversity K07456 - - 0.0000000000002116 70.0
DYD1_k127_1180593_0 Domain of unknown function (DUF5110) K01187 - 3.2.1.20 1.756e-200 653.0
DYD1_k127_1180593_1 Glucodextranase, domain N K01178 - 3.2.1.3 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008174 425.0
DYD1_k127_1180593_2 transcriptional regulator sugar kinase K00845 - 2.7.1.2 0.0000000000000000000000000000000000000000000000000000000000000000000518 242.0
DYD1_k127_1191007_0 Required for accurate and efficient protein synthesis under certain stress conditions. May act as a fidelity factor of the translation reaction, by catalyzing a one-codon backward translocation of tRNAs on improperly translocated ribosomes. Back- translocation proceeds from a post-translocation (POST) complex to a pre-translocation (PRE) complex, thus giving elongation factor G a second chance to translocate the tRNAs correctly. Binds to ribosomes in a GTP-dependent manner K03596 - - 3.406e-283 880.0
DYD1_k127_1191007_1 PFAM Pyridoxal-dependent decarboxylase conserved domain K01580,K01593,K13745 - 4.1.1.105,4.1.1.15,4.1.1.28,4.1.1.86 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009027 567.0
DYD1_k127_1191007_10 3'(2'),5'-bisphosphate nucleotidase activity K01082 - 3.1.3.7 0.000000000000000000000000000000000000000000000000000000000001069 220.0
DYD1_k127_1191007_11 Catalyzes the reversible conversion of 3- phosphohydroxypyruvate to phosphoserine and of 3-hydroxy-2-oxo-4- phosphonooxybutanoate to phosphohydroxythreonine K00831 GO:0003674,GO:0003824,GO:0004648,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006082,GO:0006520,GO:0006563,GO:0006564,GO:0006807,GO:0008150,GO:0008152,GO:0008483,GO:0008652,GO:0009058,GO:0009069,GO:0009070,GO:0009987,GO:0016053,GO:0016740,GO:0016769,GO:0019752,GO:0043436,GO:0044237,GO:0044238,GO:0044249,GO:0044281,GO:0044283,GO:0044424,GO:0044464,GO:0046394,GO:0071704,GO:1901564,GO:1901566,GO:1901576,GO:1901605,GO:1901607 2.6.1.52 0.00000000000000000000000000000000000000000000000000000000009276 207.0
DYD1_k127_1191007_12 Radical SAM superfamily K22226 - - 0.00000000000000000000000000000000000004014 156.0
DYD1_k127_1191007_13 Histidine kinase - - - 0.000000000000000000000000000000000008222 155.0
DYD1_k127_1191007_14 Cupin 2, conserved barrel domain protein - - - 0.0000000000000000000000000000000001388 147.0
DYD1_k127_1191007_15 membrane - - - 0.0000000000000000000000000000000002361 135.0
DYD1_k127_1191007_16 Catalyzes the ATP- as well as the pyrophosphate- dependent phosphorylation of a specific serine residue in HPr, a phosphocarrier protein of the phosphoenolpyruvate-dependent sugar phosphotransferase system (PTS). HprK P also catalyzes the pyrophosphate-producing, inorganic phosphate-dependent dephosphorylation (phosphorolysis) of seryl-phosphorylated HPr (P- Ser-HPr). The two antagonistic activities of HprK P are regulated by several intracellular metabolites, which change their concentration in response to the absence or presence of rapidly metabolisable carbon sources (glucose, fructose, etc.) in the growth medium. Therefore, by controlling the phosphorylation state of HPr, HPrK P is a sensor enzyme that plays a major role in the regulation of carbon metabolism and sugar transport it mediates carbon catabolite repression (CCR), and regulates PTS-catalyzed carbohydrate uptake and inducer exclusion - - - 0.000000000003462 78.0
DYD1_k127_1191007_2 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding K00058 - 1.1.1.399,1.1.1.95 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008162 544.0
DYD1_k127_1191007_3 - K00262 - 1.4.1.4 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001862 471.0
DYD1_k127_1191007_4 two component, sigma54 specific, transcriptional regulator, Fis family K02481,K07713 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000218 383.0
DYD1_k127_1191007_5 Converts alpha-N-acetylneuranimic acid (Neu5Ac) to the beta-anomer, accelerating the equilibrium between the alpha- and beta-anomers. Probably facilitates sialidase-negative bacteria to compete sucessfully for limited amounts of extracellular Neu5Ac, which is likely taken up in the beta-anomer. In addition, the rapid removal of sialic acid from solution might be advantageous to the bacterium to damp down host responses - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007416 374.0
DYD1_k127_1191007_6 4Fe-4S single cluster domain of Ferredoxin I - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005433 348.0
DYD1_k127_1191007_7 Aldo/keto reductase family - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003192 320.0
DYD1_k127_1191007_8 Belongs to the short-chain dehydrogenases reductases (SDR) family K07124 - - 0.00000000000000000000000000000000000000000000000000000000000000000001732 241.0
DYD1_k127_1191007_9 Uncharacterised nucleotidyltransferase - - - 0.000000000000000000000000000000000000000000000000000000000000000000235 244.0
DYD1_k127_1206170_0 L-seryl-tRNA selenium transferase K01042 - 2.9.1.1 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004776 378.0
DYD1_k127_1206170_1 CHASE2 - - - 0.000000000000000000000000000000000000000000000000001958 205.0
DYD1_k127_1206170_2 SET domain K07117 - - 0.00000000000000000000000000181 118.0
DYD1_k127_1206170_3 - - - - 0.000000000000000000000000006907 119.0
DYD1_k127_1206170_4 'Cold-shock' DNA-binding domain K03704 - - 0.0000000000000001817 79.0
DYD1_k127_1213288_0 Cytochrome c - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007085 598.0
DYD1_k127_1213288_1 Prolyl oligopeptidase family - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004135 489.0
DYD1_k127_1213288_2 Glucose / Sorbosone dehydrogenase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003085 428.0
DYD1_k127_1231178_0 - - - - 0.000000000000000000000000000000000000000264 165.0
DYD1_k127_1231178_1 - - - - 0.00000000000000000000000001458 118.0
DYD1_k127_1231178_2 Pilus assembly protein PilX K02673 - - 0.000000000000000004595 98.0
DYD1_k127_1247991_0 Belongs to the universal ribosomal protein uS2 family K02967 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001143 347.0
DYD1_k127_1247991_1 Catalyzes the reversible phosphorylation of UMP to UDP K09903 - 2.7.4.22 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006377 311.0
DYD1_k127_1247991_10 Prokaryotic N-terminal methylation motif K02456 - - 0.000000000000000000000000005227 119.0
DYD1_k127_1247991_11 general secretion pathway protein D K02453 - - 0.0000000001581 74.0
DYD1_k127_1247991_12 Pilus assembly protein K02662 - - 0.000001132 60.0
DYD1_k127_1247991_13 serine threonine protein kinase K08884,K12132 GO:0000270,GO:0003674,GO:0003824,GO:0004672,GO:0004674,GO:0005488,GO:0005515,GO:0005575,GO:0005618,GO:0005623,GO:0006022,GO:0006023,GO:0006024,GO:0006464,GO:0006468,GO:0006793,GO:0006796,GO:0006807,GO:0008047,GO:0008150,GO:0008152,GO:0008360,GO:0009058,GO:0009059,GO:0009252,GO:0009273,GO:0009605,GO:0009607,GO:0009889,GO:0009890,GO:0009892,GO:0009987,GO:0010565,GO:0010698,GO:0016301,GO:0016310,GO:0016740,GO:0016772,GO:0016773,GO:0019216,GO:0019217,GO:0019222,GO:0019538,GO:0022603,GO:0022604,GO:0030145,GO:0030203,GO:0030234,GO:0030312,GO:0031323,GO:0031324,GO:0031326,GO:0031327,GO:0032091,GO:0034645,GO:0036211,GO:0040007,GO:0042304,GO:0042546,GO:0042802,GO:0043085,GO:0043086,GO:0043167,GO:0043169,GO:0043170,GO:0043207,GO:0043388,GO:0043393,GO:0043412,GO:0044036,GO:0044038,GO:0044085,GO:0044092,GO:0044093,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044403,GO:0044419,GO:0044464,GO:0045717,GO:0045833,GO:0045922,GO:0046777,GO:0046872,GO:0046890,GO:0046914,GO:0048519,GO:0048523,GO:0050789,GO:0050790,GO:0050793,GO:0050794,GO:0050896,GO:0051055,GO:0051098,GO:0051099,GO:0051100,GO:0051101,GO:0051128,GO:0051701,GO:0051704,GO:0051707,GO:0052173,GO:0052200,GO:0052564,GO:0052572,GO:0062012,GO:0062014,GO:0065007,GO:0065008,GO:0065009,GO:0070589,GO:0071554,GO:0071704,GO:0071840,GO:0071944,GO:0075136,GO:0080090,GO:0098772,GO:0140096,GO:1901135,GO:1901137,GO:1901564,GO:1901566,GO:1901576 2.7.11.1 0.000002527 59.0
DYD1_k127_1247991_2 Associates with the EF-Tu.GDP complex and induces the exchange of GDP to GTP. It remains bound to the aminoacyl-tRNA.EF- Tu.GTP complex up to the GTP hydrolysis stage on the ribosome K02357 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000001946 286.0
DYD1_k127_1247991_3 Responsible for the release of ribosomes from messenger RNA at the termination of protein biosynthesis. May increase the efficiency of translation by recycling ribosomes from one round of translation to another K02838 - - 0.0000000000000000000000000000000000000000000000000000000000000001176 226.0
DYD1_k127_1247991_4 Participates in transcription elongation, termination and antitermination - - - 0.0000000000000000000000000000000000000000000000000000000005148 216.0
DYD1_k127_1247991_5 This protein is one of the early assembly proteins of the 50S ribosomal subunit, although it is not seen to bind rRNA by itself. It is important during the early stages of 50S assembly K02871 - - 0.000000000000000000000000000000000000000000000000001629 186.0
DYD1_k127_1247991_6 Belongs to the universal ribosomal protein uS9 family K02996 - - 0.00000000000000000000000000000000000000000000001021 174.0
DYD1_k127_1247991_7 ECF sigma factor K03088 - - 0.0000000000000000000000000000000000198 142.0
DYD1_k127_1247991_8 Peptidase family M48 - - - 0.00000000000000000000000000000003774 133.0
DYD1_k127_1247991_9 Prokaryotic N-terminal methylation motif K02456 - - 0.0000000000000000000000000000911 120.0
DYD1_k127_1251878_0 Acyl-CoA dehydrogenase, C-terminal domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002177 471.0
DYD1_k127_1251878_1 Tryptophanyl-tRNA synthetase K01867 - 6.1.1.2 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008117 382.0
DYD1_k127_1251878_2 Belongs to the pseudouridine synthase RsuA family K06178 GO:0000154,GO:0000455,GO:0001522,GO:0003674,GO:0003824,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006139,GO:0006364,GO:0006396,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0009451,GO:0009982,GO:0009987,GO:0010467,GO:0016070,GO:0016072,GO:0016853,GO:0016866,GO:0022613,GO:0031118,GO:0034470,GO:0034641,GO:0034660,GO:0042254,GO:0043170,GO:0043412,GO:0044085,GO:0044237,GO:0044238,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0071704,GO:0071840,GO:0090304,GO:1901360 5.4.99.22 0.0000000000000000000000000000000000000000000000000000000000000000000001753 246.0
DYD1_k127_1251878_3 Participates in chromosomal partition during cell division. May act via the formation of a condensin-like complex containing Smc and ScpA that pull DNA away from mid-cell into both cell halves K06024 - - 0.0000000000000000000000000000000000000000000000002136 184.0
DYD1_k127_1251878_4 Participates in chromosomal partition during cell division. May act via the formation of a condensin-like complex containing Smc and ScpB that pull DNA away from mid-cell into both cell halves K05896 GO:0003674,GO:0005488,GO:0005515,GO:0042802 - 0.00000000000000000000000000000000000000000007054 170.0
DYD1_k127_1251878_5 PFAM peptidase M50 - - - 0.0000000000000939 73.0
DYD1_k127_1259820_0 GTP-binding protein TypA K06207 - - 4.318e-260 814.0
DYD1_k127_1259820_1 Type II/IV secretion system protein K02669 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004458 426.0
DYD1_k127_1259820_2 Domain of unknown function (DUF2088) - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000006257 291.0
DYD1_k127_1259820_3 cation diffusion facilitator family transporter K16264 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000178 269.0
DYD1_k127_1259820_4 Methylates the ribose at the nucleotide 34 wobble position in the two leucyl isoacceptors tRNA(Leu)(CmAA) and tRNA(Leu)(cmnm5UmAA). Catalyzes the methyl transfer from S- adenosyl-L-methionine to the 2'-OH of the wobble nucleotide K03216 - 2.1.1.207 0.000000000000000000000000000000000000000000000000005746 184.0
DYD1_k127_1259820_5 Condenses 4-methyl-5-(beta-hydroxyethyl)thiazole monophosphate (THZ-P) and 2-methyl-4-amino-5-hydroxymethyl pyrimidine pyrophosphate (HMP-PP) to form thiamine monophosphate (TMP) K00788 - 2.5.1.3 0.00000000000000000000000000000000000000007977 161.0
DYD1_k127_1259820_6 zinc-ribbon domain - - - 0.000000000000004128 85.0
DYD1_k127_1286849_0 sigma-54 factor interaction domain-containing protein K02667 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001467 418.0
DYD1_k127_1286849_1 Pfam:N_methyl_2 - - - 0.0000000000468 64.0
DYD1_k127_1290504_0 Oxidoreductase domain protein - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000004382 278.0
DYD1_k127_1290504_1 Beta-lactamase - - - 0.0000000000000000000000000000000000000000000000000000000000000000006439 242.0
DYD1_k127_1290504_2 Dolichyl-phosphate-mannose-protein mannosyltransferase - - - 0.0000000000000000000000000000000000000000000000000004042 204.0
DYD1_k127_1290504_3 Transfers a GMP moiety from GTP to Mo-molybdopterin (Mo- MPT) cofactor (Moco or molybdenum cofactor) to form Mo- molybdopterin guanine dinucleotide (Mo-MGD) cofactor K03752 - 2.7.7.77 0.0000000000000000000000000004312 121.0
DYD1_k127_1290504_4 of the alpha beta superfamily K06889 - - 0.000000644 61.0
DYD1_k127_1296925_0 GlcNAc-PI de-N-acetylase - - - 0.000000000000000000000000000000000000000000000000000000000000000005186 252.0
DYD1_k127_1296925_1 ABC-type Fe3 transport system permease component K02011 - - 0.000000000000000000000000000000000000000000000000000000000001408 220.0
DYD1_k127_1300800_0 Subtilase family - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002592 336.0
DYD1_k127_1300800_1 Evidence 3 Function proposed based on presence of conserved amino acid motif, structural feature or limited homology - - - 0.00000000000000000000000000000000000000000000000000000000000000000000001508 265.0
DYD1_k127_1300800_2 Domain of unknown function (DUF4081) K06976 - - 0.00000000000000001681 93.0
DYD1_k127_1309569_0 Amidase K01426 - 3.5.1.4 1.211e-205 652.0
DYD1_k127_1309569_1 GTPase that plays an essential role in the late steps of ribosome biogenesis K03977 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000785 253.0
DYD1_k127_1309569_2 Dienelactone hydrolase family - - - 0.0000000000000000000000000000000000000000000009851 167.0
DYD1_k127_1309569_3 Belongs to the UPF0102 family K07460 - - 0.0000000000001139 76.0
DYD1_k127_1309569_4 Pfam Polyketide cyclase dehydrase and lipid transport - - - 0.0000000007652 67.0
DYD1_k127_131177_0 Type II/IV secretion system protein K02669 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003082 486.0
DYD1_k127_131177_1 Belongs to the thiolase family K00626 - 2.3.1.9 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005657 467.0
DYD1_k127_131177_2 - - - - 0.00000000000000000000000000002062 134.0
DYD1_k127_131177_3 Domain of unknown function (DUF4412) - - - 0.00001122 57.0
DYD1_k127_1327716_0 Histidine kinase K07636 - 2.7.13.3 0.00000000000000000000000000000000000000000003447 167.0
DYD1_k127_1327716_1 DnaJ molecular chaperone homology domain - - - 0.00000000000001925 76.0
DYD1_k127_1327716_2 Carboxypeptidase K21464 GO:0005575,GO:0005623,GO:0005886,GO:0016020,GO:0044464,GO:0071944 2.4.1.129,3.4.16.4 0.0006046 45.0
DYD1_k127_1335650_0 TIGRFAM asparagine synthase (glutamine-hydrolyzing) K01953 - 6.3.5.4 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007406 568.0
DYD1_k127_1335650_1 inositol 2-dehydrogenase activity - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000843 305.0
DYD1_k127_1335650_2 DegT/DnrJ/EryC1/StrS aminotransferase family - - - 0.0000000000000000000000000000000000000000000000000002757 205.0
DYD1_k127_13360_0 oxidoreductase activity - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002775 539.0
DYD1_k127_13360_1 elongation factor SelB, winged helix K03833 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006258 528.0
DYD1_k127_13360_2 glycosyl transferase group 1 K00754 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000647 402.0
DYD1_k127_13360_3 Scaffold protein Nfu/NifU N terminal - - - 0.00000000000000000000000000000000000000000000000000000003167 201.0
DYD1_k127_13360_4 PFAM GlcNAc-PI de-N-acetylase K01463 - - 0.000000000000000000000000000000000000000000000001235 183.0
DYD1_k127_13360_5 Endonuclease/Exonuclease/phosphatase family - - - 0.00000000005878 73.0
DYD1_k127_1355013_0 single-stranded-DNA-specific exonuclease RecJ K07462 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001752 485.0
DYD1_k127_1355013_1 Belongs to the PEP-utilizing enzyme family K02768,K08483,K11183 - 2.7.1.202,2.7.3.9 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003408 387.0
DYD1_k127_1355013_2 RNA polymerase sigma-54 factor K03092 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001329 350.0
DYD1_k127_1355013_3 lipopolysaccharide transport protein B ATP-binding component of ABC superfamily K01990,K06861 GO:0003674,GO:0003824,GO:0005215,GO:0005319,GO:0005575,GO:0005623,GO:0005886,GO:0006810,GO:0006869,GO:0008150,GO:0010876,GO:0015221,GO:0015399,GO:0015405,GO:0015437,GO:0015920,GO:0016020,GO:0016021,GO:0016462,GO:0016787,GO:0016817,GO:0016818,GO:0016887,GO:0017111,GO:0022804,GO:0022857,GO:0022884,GO:0031224,GO:0032991,GO:0033036,GO:0034040,GO:0042623,GO:0042626,GO:0043190,GO:0043492,GO:0044425,GO:0044459,GO:0044464,GO:0051179,GO:0051234,GO:0055085,GO:0071702,GO:0071944,GO:0098533,GO:0098796,GO:0098797,GO:1901264,GO:1901505,GO:1902494,GO:1902495,GO:1904949,GO:1990351 - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008559 314.0
DYD1_k127_1355013_4 Displays ATPase and GTPase activities K06958 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000002226 267.0
DYD1_k127_1355013_5 Catalyzes the dephosphorylation of undecaprenyl diphosphate (UPP). Confers resistance to bacitracin K06153 - 3.6.1.27 0.00000000000000000000000000000000000000000000000000000000000001203 224.0
DYD1_k127_1355013_6 PTS system fructose IIA component K02793,K02794,K02821 - 2.7.1.191,2.7.1.194 0.0000000000000000000000000000000329 130.0
DYD1_k127_1355013_7 lipopolysaccharide transport K09774 - - 0.0000000000000000000000000000007579 141.0
DYD1_k127_1355013_8 Required for dimerization of active 70S ribosomes into 100S ribosomes in stationary phase K05808 - - 0.000000000000000000000000000004374 125.0
DYD1_k127_1359029_0 Acyl-CoA dehydrogenase, C-terminal domain K16173 - 1.3.99.32 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005452 526.0
DYD1_k127_1359029_1 Nitrilase cyanide hydratase and apolipoprotein N-acyltransferase K12251 - 3.5.1.53 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001192 415.0
DYD1_k127_1359029_2 Belongs to the agmatine deiminase family K10536 - 3.5.3.12 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001308 386.0
DYD1_k127_1359029_3 beta-fructofuranosidase activity - - - 0.00000000000000000000000000000000000000000000000000000158 205.0
DYD1_k127_1359029_4 - - - - 0.0000000000000128 76.0
DYD1_k127_1359029_5 Belongs to the tRNA nucleotidyltransferase poly(A) polymerase family K00974 - 2.7.7.72 0.0000001626 53.0
DYD1_k127_1367535_0 - - - - 1.57e-260 862.0
DYD1_k127_1367535_1 Baseplate J-like protein - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001857 495.0
DYD1_k127_1367535_10 PFAM IS1 transposase - - - 0.000000000001419 70.0
DYD1_k127_1367535_2 - - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000071 502.0
DYD1_k127_1367535_3 Rhs element vgr protein - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005529 326.0
DYD1_k127_1367535_4 Late control gene D protein - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000003916 301.0
DYD1_k127_1367535_5 OmpA family - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000001322 283.0
DYD1_k127_1367535_6 - - - - 0.000000000000000000000000000000000000000000000000000000000000000000000002098 257.0
DYD1_k127_1367535_7 - - - - 0.0000000000000000000000000000000000000000007682 159.0
DYD1_k127_1367535_8 GPW Gp25 family protein - - - 0.0000000000000000000000000000000000000000007967 162.0
DYD1_k127_1375285_0 Isocitrate/isopropylmalate dehydrogenase K00052 - 1.1.1.85 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009468 389.0
DYD1_k127_1375285_1 Belongs to the CinA family K03742 - 3.5.1.42 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005902 386.0
DYD1_k127_1375285_2 Peptidase family M28 - - - 0.000000000000000000000000000000000000000000000000000000000001032 222.0
DYD1_k127_1375285_3 Universal stress protein family - - - 0.00000000000000002335 88.0
DYD1_k127_1375285_4 2Fe-2S iron-sulfur cluster binding domain - - - 0.0004761 48.0
DYD1_k127_1386612_0 ATP-dependent serine protease that mediates the selective degradation of mutant and abnormal proteins as well as certain short-lived regulatory proteins. Required for cellular homeostasis and for survival from DNA damage and developmental changes induced by stress. Degrades polypeptides processively to yield small peptide fragments that are 5 to 10 amino acids long. Binds to DNA in a double-stranded, site-specific manner K01338 - 3.4.21.53 3.774e-268 848.0
DYD1_k127_1386612_1 Involved in the TCA cycle. Catalyzes the stereospecific interconversion of fumarate to L-malate K01679 - 4.2.1.2 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001967 610.0
DYD1_k127_1386612_10 Belongs to the small heat shock protein (HSP20) family K13993 - - 0.0000000000000000000005179 100.0
DYD1_k127_1386612_11 Evidence 3 Function proposed based on presence of conserved amino acid motif, structural feature or limited homology K00363,K05710 - 1.7.1.15 0.0000000000000000003296 92.0
DYD1_k127_1386612_12 Uncharacterized conserved protein (DUF2277) - - - 0.000000000000000005297 83.0
DYD1_k127_1386612_13 aggregation factor core protein MAFp3, isoform C - - - 0.0000005414 64.0
DYD1_k127_1386612_2 PFAM Glycosyl transferase, group 1 - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000008752 300.0
DYD1_k127_1386612_3 Converts alpha-N-acetylneuranimic acid (Neu5Ac) to the beta-anomer, accelerating the equilibrium between the alpha- and beta-anomers. Probably facilitates sialidase-negative bacteria to compete sucessfully for limited amounts of extracellular Neu5Ac, which is likely taken up in the beta-anomer. In addition, the rapid removal of sialic acid from solution might be advantageous to the bacterium to damp down host responses - - - 0.0000000000000000000000000000000000000000000000000000009854 222.0
DYD1_k127_1386612_4 COG2931 RTX toxins and related Ca2 -binding proteins - - - 0.0000000000000000000000000000000000000000000007406 192.0
DYD1_k127_1386612_5 PFAM MgtC SapB transporter K07507 - - 0.00000000000000000000000000000000000000004212 157.0
DYD1_k127_1386612_6 Polymorphic membrane protein - - - 0.0000000000000000000000000000000003052 154.0
DYD1_k127_1386612_7 Protein of unknown function (DUF541) K09807 GO:0005575,GO:0005623,GO:0042597,GO:0044464 - 0.000000000000000000000000000000002286 138.0
DYD1_k127_1386612_8 4Fe-4S single cluster domain of Ferredoxin I - - - 0.0000000000000000000000000002538 115.0
DYD1_k127_1386612_9 Domain in cystathionine beta-synthase and other proteins. - - - 0.00000000000000000000000005862 119.0
DYD1_k127_1388824_0 DALR_2 K01883 - 6.1.1.16 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006725 398.0
DYD1_k127_1388824_1 Glycosyl hydrolase family 47 K01230 - 3.2.1.113 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000009219 280.0
DYD1_k127_1388824_2 Catalyzes the ATP-dependent phosphorylation of thiamine- monophosphate (TMP) to form thiamine-pyrophosphate (TPP), the active form of vitamin B1 K00946 - 2.7.4.16 0.0000000000000000000000000000000000000000000003108 176.0
DYD1_k127_1402381_0 D-xylulose 5-phosphate D-fructose 6-phosphate phosphoketolase K01621 - 4.1.2.22,4.1.2.9 2.497e-291 900.0
DYD1_k127_1402381_1 Catalyzes the formation of acetyl phosphate from acetate and ATP. Can also catalyze the reverse reaction K00925 - 2.7.2.1 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003019 569.0
DYD1_k127_1402381_2 Chaperone of endosialidase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000004396 310.0
DYD1_k127_1402381_3 Domain of unknown function DUF302 - - - 0.0000000000000000000000000000000001543 136.0
DYD1_k127_1402381_4 cell wall surface anchor family protein - - - 0.0000000000000000006961 101.0
DYD1_k127_1406184_0 Metallo-beta-lactamase superfamily - - - 0.0000000000000000000000000000000000000000000000000000000000002285 220.0
DYD1_k127_1406184_1 Belongs to the peptidase M16 family - - - 0.00000000000000000000000000000000000002244 151.0
DYD1_k127_1406528_0 PFAM Zinc carboxypeptidase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000003087 291.0
DYD1_k127_1410433_0 damaged site, the DNA wraps around one UvrB monomer. DNA wrap is dependent on ATP binding by UvrB and probably causes local melting of the DNA helix, facilitating insertion of UvrB beta-hairpin between the DNA strands. Then UvrB probes one DNA strand for the presence of a lesion. If a lesion is found the UvrA subunits dissociate and the UvrB-DNA preincision complex is formed. This complex is subsequently bound by UvrC and the second UvrB is released. If no lesion is found, the DNA wraps around the other UvrB subunit that will check the other stand for damage K03702,K08999 GO:0003674,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0008150,GO:0009314,GO:0009380,GO:0009628,GO:0032991,GO:0042802,GO:0044424,GO:0044464,GO:0050896,GO:1902494,GO:1905347,GO:1905348,GO:1990391 - 1.993e-267 838.0
DYD1_k127_1410433_1 PFAM FAD linked oxidase domain protein K00102 - 1.1.2.4 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001619 507.0
DYD1_k127_1410433_2 Catalyzes the anti-1,4-elimination of the C-3 phosphate and the C-6 proR hydrogen from 5-enolpyruvylshikimate-3-phosphate (EPSP) to yield chorismate, which is the branch point compound that serves as the starting substrate for the three terminal pathways of aromatic amino acid biosynthesis. This reaction introduces a second double bond into the aromatic ring system K01736 GO:0000166,GO:0003674,GO:0003824,GO:0004107,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006082,GO:0006520,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0008652,GO:0009058,GO:0009072,GO:0009073,GO:0009423,GO:0009987,GO:0010181,GO:0016053,GO:0016829,GO:0016835,GO:0016838,GO:0019438,GO:0019752,GO:0032553,GO:0036094,GO:0043167,GO:0043168,GO:0043436,GO:0043648,GO:0043650,GO:0044237,GO:0044238,GO:0044249,GO:0044281,GO:0044283,GO:0044424,GO:0044444,GO:0044464,GO:0046394,GO:0046417,GO:0048037,GO:0050662,GO:0071704,GO:0097159,GO:0097367,GO:1901265,GO:1901360,GO:1901362,GO:1901363,GO:1901564,GO:1901566,GO:1901576 4.2.3.5 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000005309 300.0
DYD1_k127_1410433_3 - - - - 0.0000001854 63.0
DYD1_k127_1421636_0 Catalyzes the conversion of GDP-D-mannose to GDP-4- dehydro-6-deoxy-D-mannose K01711 - 4.2.1.47 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005029 426.0
DYD1_k127_1421636_1 Wzt C-terminal domain K09691 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001468 404.0
DYD1_k127_1421636_2 Methyltransferase - - - 0.0000000000000000000000000003297 123.0
DYD1_k127_1435746_0 von Willebrand factor, type A - - - 0.000000000000000000000000000000000000000000005211 179.0
DYD1_k127_1435746_1 Putative ATP-dependent DNA helicase recG C-terminal K03655 - 3.6.4.12 0.0000000000000000000000000000000301 141.0
DYD1_k127_1435746_2 - - - - 0.00000001674 64.0
DYD1_k127_1435746_3 Protein conserved in bacteria - - - 0.000003329 57.0
DYD1_k127_1448126_0 Vacuole effluxer Atg22 like K06902 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008052 462.0
DYD1_k127_1448126_1 Metalloenzyme superfamily - - - 0.00000000000000000000000000000000000000006027 158.0
DYD1_k127_1448126_2 CAAX protease self-immunity K07052 - - 0.000003299 58.0
DYD1_k127_1453231_0 amine dehydrogenase activity - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001159 371.0
DYD1_k127_1453231_1 Required for disulfide bond formation in some periplasmic proteins. Acts by transferring its disulfide bond to other proteins and is reduced in the process - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000001245 282.0
DYD1_k127_1453231_2 SCO1/SenC K07152,K08976 - - 0.00000000000000000000000000000000000000000000000000000000004801 211.0
DYD1_k127_1453231_3 SCO1/SenC K07152,K08976 - - 0.0000000000000000000000000000000000000000000000000000000001621 209.0
DYD1_k127_1456889_0 Glycosyl hydrolase 36 superfamily, catalytic domain K13688 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000009333 271.0
DYD1_k127_1456889_1 Nuclease that resolves Holliday junction intermediates in genetic recombination. Cleaves the cruciform structure in supercoiled DNA by nicking to strands with the same polarity at sites symmetrically opposed at the junction in the homologous arms and leaves a 5'-terminal phosphate and a 3'-terminal hydroxyl group K01159 GO:0000725,GO:0003674,GO:0003824,GO:0004518,GO:0004519,GO:0004520,GO:0004536,GO:0005575,GO:0005622,GO:0005623,GO:0006139,GO:0006259,GO:0006260,GO:0006261,GO:0006281,GO:0006310,GO:0006725,GO:0006807,GO:0006950,GO:0006974,GO:0008150,GO:0008152,GO:0008821,GO:0009058,GO:0009059,GO:0009987,GO:0016787,GO:0016788,GO:0016889,GO:0016894,GO:0031297,GO:0032991,GO:0033554,GO:0034641,GO:0034645,GO:0043170,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044424,GO:0044464,GO:0045005,GO:0046483,GO:0048476,GO:0050896,GO:0051716,GO:0071704,GO:0071932,GO:0090304,GO:0090305,GO:0140097,GO:1901360,GO:1901576 3.1.22.4 0.0000000000000000000000000000000000000000005345 162.0
DYD1_k127_1459477_0 Tricorn protease homolog K08676 - - 1.149e-224 739.0
DYD1_k127_1459477_1 ubiE/COQ5 methyltransferase family - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001851 331.0
DYD1_k127_1459477_2 Tetratricopeptide repeat - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000291 297.0
DYD1_k127_1459477_3 amine dehydrogenase activity - - - 0.00000000000000000005936 93.0
DYD1_k127_1472190_0 3-demethylubiquinone-9 3-O-methyltransferase activity - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000001374 267.0
DYD1_k127_1472190_1 Transport permease protein K01992,K09690 - - 0.00000000000000000000000000000000000000000000000000000000000054 220.0
DYD1_k127_1472190_2 PQQ-like domain - - - 0.00000000000000000000000000000000000000000000000000002575 203.0
DYD1_k127_1472190_3 Responsible for synthesis of pseudouridine from uracil- 55 in the psi GC loop of transfer RNAs K03177 GO:0001522,GO:0003674,GO:0003824,GO:0006139,GO:0006396,GO:0006399,GO:0006400,GO:0006725,GO:0006807,GO:0008033,GO:0008150,GO:0008152,GO:0009451,GO:0009982,GO:0009987,GO:0010467,GO:0016070,GO:0016071,GO:0016556,GO:0016853,GO:0016866,GO:0034470,GO:0034641,GO:0034660,GO:0043170,GO:0043412,GO:0044237,GO:0044238,GO:0046483,GO:0071704,GO:0090304,GO:1901360,GO:1990481 5.4.99.25 0.0000000000000000000837 93.0
DYD1_k127_1472190_4 bacterial-type flagellum-dependent cell motility K03641 - - 0.000000000007336 78.0
DYD1_k127_1472190_5 Belongs to the peptidase M10A family - - - 0.0000008686 62.0
DYD1_k127_1472190_6 pyrroloquinoline quinone binding - - - 0.00001065 58.0
DYD1_k127_1482925_0 Required for chromosome condensation and partitioning K03529 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001482 584.0
DYD1_k127_1488952_0 dTDP biosynthetic process K00560,K00943,K01585 GO:0000166,GO:0000287,GO:0001882,GO:0001883,GO:0003674,GO:0003824,GO:0004798,GO:0005488,GO:0005515,GO:0005524,GO:0005525,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006139,GO:0006220,GO:0006221,GO:0006227,GO:0006233,GO:0006235,GO:0006725,GO:0006753,GO:0006793,GO:0006796,GO:0006807,GO:0008144,GO:0008150,GO:0008152,GO:0009041,GO:0009058,GO:0009117,GO:0009123,GO:0009129,GO:0009132,GO:0009133,GO:0009138,GO:0009139,GO:0009141,GO:0009142,GO:0009147,GO:0009148,GO:0009161,GO:0009165,GO:0009173,GO:0009186,GO:0009189,GO:0009196,GO:0009197,GO:0009200,GO:0009202,GO:0009211,GO:0009212,GO:0009218,GO:0009219,GO:0009221,GO:0009259,GO:0009262,GO:0009263,GO:0009265,GO:0009394,GO:0009987,GO:0016301,GO:0016310,GO:0016740,GO:0016772,GO:0016776,GO:0017076,GO:0018130,GO:0019001,GO:0019205,GO:0019438,GO:0019637,GO:0019692,GO:0019693,GO:0030554,GO:0032549,GO:0032550,GO:0032553,GO:0032555,GO:0032559,GO:0032561,GO:0034641,GO:0034654,GO:0035639,GO:0036094,GO:0042802,GO:0042803,GO:0043167,GO:0043168,GO:0043169,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0044424,GO:0044464,GO:0046044,GO:0046072,GO:0046075,GO:0046077,GO:0046385,GO:0046483,GO:0046872,GO:0046940,GO:0046983,GO:0050145,GO:0055086,GO:0071704,GO:0072527,GO:0072528,GO:0090407,GO:0097159,GO:0097367,GO:1901135,GO:1901137,GO:1901265,GO:1901293,GO:1901360,GO:1901362,GO:1901363,GO:1901564,GO:1901566,GO:1901576 2.1.1.45,2.7.4.9,4.1.1.19 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007339 326.0
DYD1_k127_1488952_1 dTDP biosynthetic process K00943,K01585 GO:0000166,GO:0000287,GO:0001882,GO:0001883,GO:0003674,GO:0003824,GO:0004798,GO:0005488,GO:0005515,GO:0005524,GO:0005525,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006139,GO:0006220,GO:0006221,GO:0006227,GO:0006233,GO:0006235,GO:0006725,GO:0006753,GO:0006793,GO:0006796,GO:0006807,GO:0008144,GO:0008150,GO:0008152,GO:0009041,GO:0009058,GO:0009117,GO:0009123,GO:0009129,GO:0009132,GO:0009133,GO:0009138,GO:0009139,GO:0009141,GO:0009142,GO:0009147,GO:0009148,GO:0009161,GO:0009165,GO:0009173,GO:0009186,GO:0009189,GO:0009196,GO:0009197,GO:0009200,GO:0009202,GO:0009211,GO:0009212,GO:0009218,GO:0009219,GO:0009221,GO:0009259,GO:0009262,GO:0009263,GO:0009265,GO:0009394,GO:0009987,GO:0016301,GO:0016310,GO:0016740,GO:0016772,GO:0016776,GO:0017076,GO:0018130,GO:0019001,GO:0019205,GO:0019438,GO:0019637,GO:0019692,GO:0019693,GO:0030554,GO:0032549,GO:0032550,GO:0032553,GO:0032555,GO:0032559,GO:0032561,GO:0034641,GO:0034654,GO:0035639,GO:0036094,GO:0042802,GO:0042803,GO:0043167,GO:0043168,GO:0043169,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0044424,GO:0044464,GO:0046044,GO:0046072,GO:0046075,GO:0046077,GO:0046385,GO:0046483,GO:0046872,GO:0046940,GO:0046983,GO:0050145,GO:0055086,GO:0071704,GO:0072527,GO:0072528,GO:0090407,GO:0097159,GO:0097367,GO:1901135,GO:1901137,GO:1901265,GO:1901293,GO:1901360,GO:1901362,GO:1901363,GO:1901564,GO:1901566,GO:1901576 2.7.4.9,4.1.1.19 0.00000000000000000000000000000000000000000000000000000000000000000000000002173 258.0
DYD1_k127_1488952_2 Ppx GppA phosphatase family K01524 - 3.6.1.11,3.6.1.40 0.0000000000000000000000000000000000000000000000000000508 199.0
DYD1_k127_1488952_3 TIGRFAM molybdenum cofactor synthesis - - - 0.000000000000000000000000000000000000000000008476 169.0
DYD1_k127_1488952_4 phosphohistidine phosphatase K08296 - - 0.00000000000000000000000000000000669 133.0
DYD1_k127_1488952_5 CoA binding domain K06929 - - 0.000000000000000000006889 93.0
DYD1_k127_1491770_0 lipid A biosynthesis acyltransferase K02517 - 2.3.1.241 0.000000000000000000000000000000000000000888 156.0
DYD1_k127_1491770_1 Histidine kinase-like ATPase domain - - - 0.00000000000000000000000000000000000006829 155.0
DYD1_k127_1502662_0 PNKP adenylyltransferase domain, ligase domain K01090 - 3.1.3.16 0.0 1222.0
DYD1_k127_1502662_1 RNA repair, ligase-Pnkp-associating, region of Hen1 - - - 4.549e-201 635.0
DYD1_k127_1502662_2 Uracil DNA glycosylase superfamily K01934,K03649 GO:0000700,GO:0003674,GO:0003824,GO:0004844,GO:0006139,GO:0006259,GO:0006281,GO:0006284,GO:0006285,GO:0006725,GO:0006807,GO:0006950,GO:0006974,GO:0008150,GO:0008152,GO:0008263,GO:0009987,GO:0016787,GO:0016798,GO:0016799,GO:0019104,GO:0033554,GO:0034641,GO:0043170,GO:0044237,GO:0044238,GO:0044260,GO:0046483,GO:0050896,GO:0051716,GO:0071704,GO:0090304,GO:0097506,GO:0140097,GO:1901360 3.2.2.28,6.3.3.2 0.000000000000000000000000000000000000000000000000000000000000000103 224.0
DYD1_k127_1502662_3 AI-2E family transporter - - - 0.00000000000000000000000000000000000000000000000000001606 201.0
DYD1_k127_1508052_0 Dipeptidyl peptidase IV (DPP IV) N-terminal region K01278 - 3.4.14.5 6.708e-201 644.0
DYD1_k127_1508052_1 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase K13924 - 2.1.1.80,3.1.1.61 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001207 545.0
DYD1_k127_1508052_2 PQQ-like domain - - - 0.0000000000008209 72.0
DYD1_k127_152166_0 Domain of Unknown Function with PDB structure (DUF3857) - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004943 514.0
DYD1_k127_152166_1 Lysine methyltransferase - - - 0.000000000000000000000000000000000000000001576 167.0
DYD1_k127_152166_2 COGs COG1680 Beta-lactamase class C and other penicillin binding protein - - - 0.000000000000000000000000005799 116.0
DYD1_k127_1523438_0 Amidohydrolase family - - - 4.363e-218 684.0
DYD1_k127_1523438_1 amidohydrolase K03392 - 4.1.1.45 0.0000000000000000000000000000000000000000000000000000000000000000000000007365 257.0
DYD1_k127_1523438_2 RibD C-terminal domain - - - 0.00000000000000000000000000000000000000006604 155.0
DYD1_k127_1523438_3 2OG-Fe(II) oxygenase superfamily K07394 - - 0.0000000000000000000000000000000000000004078 156.0
DYD1_k127_1523438_4 Uncharacterized conserved protein (DUF2277) - - - 0.000000000000000000000000000000000000006368 146.0
DYD1_k127_1523438_5 response to abiotic stimulus - - - 0.0000000000000000000000000000002747 128.0
DYD1_k127_1523438_6 Belongs to the sigma-70 factor family. ECF subfamily K03088 - - 0.00000000000001423 81.0
DYD1_k127_1523438_7 Polymer-forming cytoskeletal - - - 0.000000009773 62.0
DYD1_k127_1523438_8 HEAT repeats - - - 0.000001228 61.0
DYD1_k127_1523438_9 Mediates coordination of peptidoglycan synthesis and outer membrane constriction during cell division - GO:0005575,GO:0005623,GO:0008150,GO:0009987,GO:0016043,GO:0022607,GO:0030288,GO:0030313,GO:0031975,GO:0042597,GO:0043933,GO:0044085,GO:0044464,GO:0051259,GO:0051260,GO:0051301,GO:0065003,GO:0071840 - 0.000572 52.0
DYD1_k127_1545900_0 TonB-dependent receptor K02014 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000004022 307.0
DYD1_k127_1545900_1 FmdE, Molybdenum formylmethanofuran dehydrogenase operon K11261 - 1.2.7.12 0.00000000000000000000000000000000000000000000000000000000002767 211.0
DYD1_k127_1545900_2 - - - - 0.0000000000003975 76.0
DYD1_k127_1545900_3 Sh3 type 3 domain protein - - - 0.000000000182 72.0
DYD1_k127_1545900_4 PFAM peptidase M61 - - - 0.00000001287 67.0
DYD1_k127_1545900_5 - - - - 0.00000007335 54.0
DYD1_k127_1549796_0 Catalyzes the synthesis of ADP-glucose, a sugar donor used in elongation reactions on alpha-glucans K00975 - 2.7.7.27 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001348 535.0
DYD1_k127_1549796_1 dna ligase K01971 - 6.5.1.1 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001035 433.0
DYD1_k127_1549796_2 Catalyzes a reversible aldol reaction between acetaldehyde and D-glyceraldehyde 3-phosphate to generate 2-deoxy- D-ribose 5-phosphate K01619,K01840 GO:0003674,GO:0003824,GO:0004139,GO:0005975,GO:0006139,GO:0006725,GO:0006753,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0009056,GO:0009058,GO:0009117,GO:0009166,GO:0009262,GO:0009264,GO:0009987,GO:0016052,GO:0016829,GO:0016830,GO:0016832,GO:0018130,GO:0019438,GO:0019439,GO:0019637,GO:0034404,GO:0034641,GO:0034654,GO:0034655,GO:0044237,GO:0044238,GO:0044248,GO:0044249,GO:0044270,GO:0044271,GO:0044281,GO:0044283,GO:0046434,GO:0046483,GO:0046700,GO:0055086,GO:0071704,GO:1901135,GO:1901136,GO:1901292,GO:1901360,GO:1901361,GO:1901362,GO:1901575,GO:1901576 4.1.2.4,5.4.2.8 0.00000000000000000000000000000000000000000000000000000000000000000000000000002493 270.0
DYD1_k127_1549796_3 Protein of unknown function, DUF488 - - - 0.00000000000000000000000000000000000000000000000000000000001523 211.0
DYD1_k127_1549796_4 DNA ligase K01971 - 6.5.1.1 0.000000000000000000000000000000000000000000001183 170.0
DYD1_k127_1549796_5 KAP family P-loop domain - - - 0.00000000000000000000000001563 120.0
DYD1_k127_1556231_0 protocatechuate 3,4-dioxygenase - - - 0.000000000000000000000002758 120.0
DYD1_k127_1570133_0 Lactonase, 7-bladed beta-propeller K07404 - 3.1.1.31 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009555 395.0
DYD1_k127_1570133_1 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III K01840,K03431,K15778 - 5.4.2.10,5.4.2.2,5.4.2.8 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000132 381.0
DYD1_k127_1570133_2 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III K01840,K03431,K15778 - 5.4.2.10,5.4.2.2,5.4.2.8 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007065 325.0
DYD1_k127_1570133_3 YdjC-like protein K03478 - 3.5.1.105 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000001083 293.0
DYD1_k127_1584975_0 acyl-CoA dehydrogenase activity K09456 - - 2.043e-222 702.0
DYD1_k127_1584975_1 Cytochrome c - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006817 387.0
DYD1_k127_1584975_2 amino acid activation for nonribosomal peptide biosynthetic process - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002151 333.0
DYD1_k127_1584975_3 to ankyrin repeat protein - - - 0.00000000000000000000000000000000006606 151.0
DYD1_k127_1584975_4 Acetyltransferase (GNAT) domain - - - 0.000000000000000002729 90.0
DYD1_k127_1584975_5 Uncharacterized protein conserved in bacteria (DUF2255) - - - 0.00000000000000002928 86.0
DYD1_k127_1587545_0 Presumably involved in the processing and regular turnover of intracellular proteins. Catalyzes the removal of unsubstituted N-terminal amino acids from various peptides K01255 - 3.4.11.1 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000195 433.0
DYD1_k127_1587545_1 sequence-specific DNA binding K01697,K01738 GO:0003674,GO:0005488,GO:0005575,GO:0005576,GO:0005618,GO:0005622,GO:0005623,GO:0005737,GO:0005886,GO:0008144,GO:0016020,GO:0019842,GO:0030170,GO:0030312,GO:0036094,GO:0043167,GO:0043168,GO:0044424,GO:0044464,GO:0048037,GO:0050662,GO:0070279,GO:0071944,GO:0097159,GO:1901363 2.5.1.47,4.2.1.22 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003704 413.0
DYD1_k127_1587545_2 Required for rescue of stalled ribosomes mediated by trans-translation. Binds to transfer-messenger RNA (tmRNA), required for stable association of tmRNA with ribosomes. tmRNA and SmpB together mimic tRNA shape, replacing the anticodon stem-loop with SmpB. tmRNA is encoded by the ssrA gene K03664 - - 0.00000000000000000000000000000000000000000000000000195 186.0
DYD1_k127_1589374_0 Belongs to the PEP-utilizing enzyme family K01006,K01007 - 2.7.9.1,2.7.9.2 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006551 571.0
DYD1_k127_1589374_1 Pyridoxal-dependent decarboxylase conserved domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000001532 289.0
DYD1_k127_1589374_2 Required for the first step of histidine biosynthesis. May allow the feedback regulation of ATP phosphoribosyltransferase activity by histidine K02502 - - 0.0000008334 55.0
DYD1_k127_1589374_3 Specifically methylates the N7 position of guanine in position 527 of 16S rRNA K03501 GO:0000154,GO:0001510,GO:0003674,GO:0003824,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006139,GO:0006364,GO:0006396,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0008168,GO:0008170,GO:0008173,GO:0008649,GO:0008757,GO:0009451,GO:0009987,GO:0010467,GO:0016070,GO:0016072,GO:0016435,GO:0016740,GO:0016741,GO:0022613,GO:0031167,GO:0032259,GO:0034470,GO:0034641,GO:0034660,GO:0036265,GO:0042254,GO:0043170,GO:0043412,GO:0043414,GO:0044085,GO:0044237,GO:0044238,GO:0044260,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0070043,GO:0070475,GO:0070476,GO:0071704,GO:0071840,GO:0090304,GO:0140098,GO:0140102,GO:1901360 2.1.1.170 0.000001651 55.0
DYD1_k127_1593336_0 Catalyzes the oxidation of glucose 6-phosphate to 6- phosphogluconolactone K00036 - 1.1.1.363,1.1.1.49 5.123e-200 635.0
DYD1_k127_1593336_1 6-phosphogluconate dehydrogenase, C-terminal domain K00033 - 1.1.1.343,1.1.1.44 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002263 493.0
DYD1_k127_1593336_2 His Kinase A (phosphoacceptor) domain K13924 - 2.1.1.80,3.1.1.61 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001946 487.0
DYD1_k127_1595868_0 Acyl transferase domain in polyketide synthase (PKS) enzymes. K04786 - - 0.0 1978.0
DYD1_k127_1595868_1 Amino acid adenylation domain - - - 0.0 1177.0
DYD1_k127_1595868_2 Phosphopantetheine attachment site K03367 - 6.1.1.13 1.796e-232 749.0
DYD1_k127_1595868_3 Taurine catabolism dioxygenase TauD, TfdA family - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004814 406.0
DYD1_k127_1595868_4 Amino acid adenylation domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000002071 264.0
DYD1_k127_1606846_0 LexA-binding, inner membrane-associated putative hydrolase K07038 - - 0.00000000000000000000000000000512 133.0
DYD1_k127_1606846_1 Tetratricopeptide repeat-like domain - - - 0.00001637 55.0
DYD1_k127_1614552_0 Belongs to the class-I aminoacyl-tRNA synthetase family K01887 - 6.1.1.19 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000919 302.0
DYD1_k127_1614552_1 form. Deacetylates the N-terminal lysine residue of Alba, the major archaeal chromatin protein and that, in turn, increases Alba's DNA binding affinity, thereby repressing transcription K12410 - - 0.000000000000000000000000000000000000000000000000000000000006036 222.0
DYD1_k127_1614552_2 Involved in the biosynthesis of a nickel-pincer cofactor ((SCS)Ni(II) pincer complex). Binds Ni(2 ), and functions in nickel delivery to pyridinium-3,5-bisthiocarboxylic acid mononucleotide (P2TMN), to form the mature cofactor. Is thus probably required for the activation of nickel-pincer cofactor- dependent enzymes K09121 - 4.99.1.12 0.000000000000000000000000000000000000000009226 157.0
DYD1_k127_162343_0 Catalyzes the addition and repair of the essential 3'- terminal CCA sequence in tRNAs without using a nucleic acid template. Adds these three nucleotides in the order of C, C, and A to the tRNA nucleotide-73, using CTP and ATP as substrates and producing inorganic pyrophosphate. Also shows phosphatase, 2'- nucleotidase and 2',3'-cyclic phosphodiesterase activities. These phosphohydrolase activities are probably involved in the repair of the tRNA 3'-CCA terminus degraded by intracellular RNases K00974 - 2.7.7.72 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004586 380.0
DYD1_k127_162343_1 Belongs to the agmatine deiminase family K10536 - 3.5.3.12 0.000000000000000000000000005088 112.0
DYD1_k127_162343_2 Catalyzes the attachment of glycine to tRNA(Gly) K01880 GO:0003674,GO:0003824,GO:0004812,GO:0004820,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006082,GO:0006139,GO:0006399,GO:0006412,GO:0006418,GO:0006426,GO:0006518,GO:0006520,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0016070,GO:0016874,GO:0016875,GO:0019538,GO:0019752,GO:0034641,GO:0034645,GO:0034660,GO:0043038,GO:0043039,GO:0043043,GO:0043170,GO:0043436,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044281,GO:0044424,GO:0044464,GO:0046483,GO:0046983,GO:0071704,GO:0090304,GO:0140098,GO:0140101,GO:1901360,GO:1901564,GO:1901566,GO:1901576 6.1.1.14 0.000000000002058 74.0
DYD1_k127_1624380_0 Multicopper oxidase K00368,K22349 - 1.16.3.3,1.7.2.1 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001375 457.0
DYD1_k127_1624380_1 SCO1/SenC - - - 0.00000000000000000000000000000000000000000000000000000002176 204.0
DYD1_k127_1624380_2 amine dehydrogenase activity - - - 0.00000000000000000000000000000000000000000000000005006 186.0
DYD1_k127_1624380_4 Reductase C-terminal - - - 0.000000000000000000000000000003389 123.0
DYD1_k127_1624380_5 Cyclic nucleotide-monophosphate binding domain - - - 0.0000000000000000000000000001626 124.0
DYD1_k127_1631651_0 Response regulator receiver - - - 0.00000000000000000000000000000000000000000000000000001048 197.0
DYD1_k127_1631651_1 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase - - - 0.0000000000000000000000000000000000000000001229 168.0
DYD1_k127_1631651_2 - - - - 0.0000000000000000000000000000000000000000003791 177.0
DYD1_k127_1631651_3 Cellulase (glycosyl hydrolase family 5) K01179 - 3.2.1.4 0.0000000000000002092 93.0
DYD1_k127_1632282_0 HD domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002753 358.0
DYD1_k127_1632282_1 ECF sigma factor K03088 - - 0.00000000000000000000000000000006324 132.0
DYD1_k127_1632282_2 InterPro IPR007367 - - - 0.0000001789 52.0
DYD1_k127_1633797_0 PFAM glycoside hydrolase, family 37 K01194 - 3.2.1.28 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002889 320.0
DYD1_k127_1633797_1 4'-phosphopantetheinyl transferase superfamily K00997,K06133 - 2.7.8.7 0.000000000000000000000000000000000000000000000000000000000000000006087 233.0
DYD1_k127_1633797_2 Cytochrome c-type biogenesis protein K02200 - - 0.000000000000000000000000000000000000000002127 164.0
DYD1_k127_1633797_3 PQQ-like domain K17713 - - 0.0000633 56.0
DYD1_k127_1633797_4 COG0457 FOG TPR repeat - - - 0.0007768 49.0
DYD1_k127_1636286_0 Catalyzes the reversible reaction in which hydroxymethyl group from 5,10-methylenetetrahydrofolate is transferred onto alpha-ketoisovalerate to form ketopantoate K00606 - 2.1.2.11 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007242 322.0
DYD1_k127_1636286_1 Catalyzes the condensation of pantoate with beta-alanine in an ATP-dependent reaction via a pantoyl-adenylate intermediate K01918 - 6.3.2.1 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000169 293.0
DYD1_k127_1636286_2 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase (HPPK) K00950 - 2.7.6.3 0.0000000000000000000000000000000000002872 146.0
DYD1_k127_1636286_3 - K01992 - - 0.0005108 52.0
DYD1_k127_1640733_1 Formiminotransferase-cyclodeaminase K00603,K01746,K13990 - 2.1.2.5,4.3.1.4 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003315 329.0
DYD1_k127_1640733_2 Urate oxidase N-terminal - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000154 253.0
DYD1_k127_1640733_3 Protein of unknown function DUF58 - - - 0.000000000000000000000000000000000000000000000000000000000000000000000179 256.0
DYD1_k127_1640733_4 Stage II sporulation protein M - - - 0.00000000000000000000000000000000000000000000000000000000000000000373 246.0
DYD1_k127_1640733_5 Ohcu decarboxylase K16840 - 4.1.1.97 0.000000000000000000000000000000000000000001375 161.0
DYD1_k127_1640733_6 Transthyretin K07127 - 3.5.2.17 0.0000000000000000000000000000000002469 134.0
DYD1_k127_1640733_7 Belongs to the allantoicase family K01477 - 3.5.3.4 0.00000000000003135 73.0
DYD1_k127_1645777_0 PFAM glycoside hydrolase family 1 K05350 - 3.2.1.21 3.499e-221 695.0
DYD1_k127_1645777_1 Penicillin amidase K01434 - 3.5.1.11 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004022 614.0
DYD1_k127_1645777_2 Methyltransferase domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006867 341.0
DYD1_k127_1645777_3 von Willebrand factor, type A - - - 0.000000000000000000000000004267 126.0
DYD1_k127_1645777_4 iron ion binding - - - 0.0000001122 54.0
DYD1_k127_1668797_0 PFAM Chitinase class I - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000023 274.0
DYD1_k127_1668797_1 isomerase activity K06998 - 5.3.3.17 0.000000000000000000000000000000000000000000000000000000000000000002701 237.0
DYD1_k127_1668797_2 Pyridine nucleotide-disulphide oxidoreductase K00384 - 1.8.1.9 0.00000000000000000000000000000000000000000000000000000001844 209.0
DYD1_k127_1668797_3 chaperone-mediated protein folding - - - 0.0000000000000000000000000000000000000000000003812 175.0
DYD1_k127_1668797_4 Rossmann-like domain - - - 0.000000000000000000000000000000000000000006331 166.0
DYD1_k127_1668797_5 Forms passive diffusion pores that allow small molecular weight hydrophilic materials across the outer membrane - - - 0.00000002972 66.0
DYD1_k127_1673244_0 PFAM Glycosyl hydrolase family 3 C terminal domain - - - 1.204e-258 818.0
DYD1_k127_1673244_1 Putative carbohydrate binding domain K12373 - 3.2.1.52 1.776e-240 761.0
DYD1_k127_1673244_2 Cytochrome c554 and c-prime - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001295 348.0
DYD1_k127_1681376_0 Alpha-1,2-mannosidase - - - 1.878e-298 945.0
DYD1_k127_1681376_1 aminopeptidase activity - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000001402 299.0
DYD1_k127_1689824_0 cellulose binding - - - 1.373e-295 939.0
DYD1_k127_1689824_1 Produces ATP from ADP in the presence of a proton gradient across the membrane. The catalytic sites are hosted primarily by the beta subunits K02112 - 3.6.3.14 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001361 392.0
DYD1_k127_1689824_2 S-adenosylmethionine-dependent methyltransferase K06969 - 2.1.1.191 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006546 309.0
DYD1_k127_1689824_3 Belongs to the peptidase S41A family K03797 - 3.4.21.102 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000006766 304.0
DYD1_k127_1689824_4 Catalyzes the complicated ring closure reaction between the two acyclic compounds 1-deoxy-D-xylulose-5-phosphate (DXP) and 3-amino-2-oxopropyl phosphate (1-amino-acetone-3-phosphate or AAP) to form pyridoxine 5'-phosphate (PNP) and inorganic phosphate K03474 GO:0003674,GO:0003824,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006725,GO:0006766,GO:0006767,GO:0006807,GO:0008150,GO:0008152,GO:0008614,GO:0008615,GO:0009058,GO:0009110,GO:0009987,GO:0016740,GO:0016769,GO:0017144,GO:0018130,GO:0019438,GO:0033856,GO:0034641,GO:0042364,GO:0042816,GO:0042819,GO:0044237,GO:0044249,GO:0044271,GO:0044281,GO:0044283,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0051186,GO:0051188,GO:0071704,GO:0072524,GO:0072525,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576,GO:1901615,GO:1901617 2.6.99.2 0.0000000000000000000000000000000000000000000000000000000000000000000000006866 256.0
DYD1_k127_1689824_5 PFAM Glycosyl transferase family 2 - - - 0.000000000000000000000000000000000000000000000000000000001153 216.0
DYD1_k127_1689824_6 Produces ATP from ADP in the presence of a proton gradient across the membrane K02114 GO:0005575,GO:0005623,GO:0005886,GO:0016020,GO:0044464,GO:0071944 - 0.000000000000000000000000000009217 124.0
DYD1_k127_1710795_0 Isocitrate/isopropylmalate dehydrogenase K00031 - 1.1.1.42 6.821e-232 725.0
DYD1_k127_1710795_1 Protein tyrosine kinase K08884 - 2.7.11.1 0.00000000000000000000000000000000000000000000000000000000000000000003456 262.0
DYD1_k127_1710795_2 Catalyzes the conversion of N5-carboxyaminoimidazole ribonucleotide (N5-CAIR) to 4-carboxy-5-aminoimidazole ribonucleotide (CAIR) K01588 - 5.4.99.18 0.00000000000000000000000000000000000000000000000000000000001171 210.0
DYD1_k127_1710795_3 RNA recognition motif - - - 0.00000000000000000000000000000000001623 139.0
DYD1_k127_1710795_4 Peptidase family M28 - - - 0.0000000000000000004558 89.0
DYD1_k127_1713033_0 DNA polymerase K02337 GO:0003674,GO:0003824,GO:0003887,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006139,GO:0006259,GO:0006260,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009360,GO:0009987,GO:0016740,GO:0016772,GO:0016779,GO:0018130,GO:0019438,GO:0032991,GO:0034061,GO:0034641,GO:0034645,GO:0034654,GO:0042575,GO:0043170,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044271,GO:0044424,GO:0044444,GO:0044464,GO:0044776,GO:0046483,GO:0061695,GO:0071704,GO:0071897,GO:0090304,GO:0140097,GO:1901360,GO:1901362,GO:1901576,GO:1902494,GO:1990234 2.7.7.7 0.0 1033.0
DYD1_k127_1713033_1 Catalyzes the methylthiolation of N6- (dimethylallyl)adenosine (i(6)A), leading to the formation of 2- methylthio-N6-(dimethylallyl)adenosine (ms(2)i(6)A) at position 37 in tRNAs that read codons beginning with uridine K06168 GO:0001510,GO:0003674,GO:0003824,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006139,GO:0006396,GO:0006399,GO:0006400,GO:0006725,GO:0006807,GO:0008033,GO:0008150,GO:0008152,GO:0009451,GO:0009987,GO:0010467,GO:0016070,GO:0016740,GO:0016782,GO:0030488,GO:0032259,GO:0034470,GO:0034641,GO:0034660,GO:0035596,GO:0035597,GO:0035600,GO:0043170,GO:0043412,GO:0043414,GO:0044237,GO:0044238,GO:0044260,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0048037,GO:0050497,GO:0051536,GO:0051539,GO:0051540,GO:0071704,GO:0090304,GO:1901360 2.8.4.3 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003683 374.0
DYD1_k127_1713033_2 Component of the acetyl coenzyme A carboxylase (ACC) complex. First, biotin carboxylase catalyzes the carboxylation of biotin on its carrier protein (BCCP) and then the CO(2) group is transferred by the carboxyltransferase to acetyl-CoA to form malonyl-CoA K01962 - 2.1.3.15,6.4.1.2 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003917 352.0
DYD1_k127_1713033_3 Cobyrinic acid ac-diamide synthase K03496 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000005303 294.0
DYD1_k127_1713033_4 Transcriptional regulator, LysR - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000008555 262.0
DYD1_k127_1713033_5 chromosome segregation K03497 - - 0.00000000000000000000000000000000000000000000000000000000000005577 223.0
DYD1_k127_1713033_6 Bifunctional nuclease K08999 - - 0.00000000000000000000000000000000000000000000000004325 183.0
DYD1_k127_1713033_7 Plays an important role in DNA replication, recombination and repair. Binds to ssDNA and to an array of partner proteins to recruit them to their sites of action during DNA metabolism K03111 - - 0.00000000000000000000000000000000002534 139.0
DYD1_k127_174144_0 Belongs to the thiolase family K00626 - 2.3.1.9 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000703 504.0
DYD1_k127_174144_1 phosphoglucomutase phosphomannomutase alpha beta alpha domain I K01835,K01840 - 5.4.2.2,5.4.2.8 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006812 397.0
DYD1_k127_174144_2 PFAM transferase hexapeptide repeat containing protein K00966 - 2.7.7.13 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007101 313.0
DYD1_k127_174144_3 Involved in base excision repair of DNA damaged by oxidation or by mutagenic agents. Acts as DNA glycosylase that recognizes and removes damaged bases. Has a preference for oxidized purines, such as 7,8-dihydro-8-oxoguanine (8-oxoG). Has AP (apurinic apyrimidinic) lyase activity and introduces nicks in the DNA strand. Cleaves the DNA backbone by beta-delta elimination to generate a single-strand break at the site of the removed base with both 3'- and 5'-phosphates K10563 - 3.2.2.23,4.2.99.18 0.0000000000000000000000000000000000000000000000000000000003732 212.0
DYD1_k127_174144_5 DinB family - - - 0.00000000000000000000000000000000000000000000007693 171.0
DYD1_k127_174144_6 DNA-templated transcription, initiation K03088 - - 0.0000000000000000000000000000000008357 137.0
DYD1_k127_1750422_0 PFAM Glycosyl transferases group 1 - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005025 443.0
DYD1_k127_1750422_1 PFAM Glycosyl transferases group 1 - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004863 383.0
DYD1_k127_1750422_2 Methionine biosynthesis protein MetW K18827 - 2.1.1.294,2.7.1.181 0.000000000000000000000000000000000000000000000000000000000000000000000004371 248.0
DYD1_k127_1750422_3 serine-type endopeptidase activity K20276 - - 0.0004836 51.0
DYD1_k127_1750821_0 AMP-binding enzyme C-terminal domain K01897 - 6.2.1.3 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001837 593.0
DYD1_k127_1750821_1 ligase activity - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003498 347.0
DYD1_k127_1750821_2 TIGRFAM TonB K03832 - - 0.00004626 55.0
DYD1_k127_1753119_0 Evidence 3 Function proposed based on presence of conserved amino acid motif, structural feature or limited homology - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000622 343.0
DYD1_k127_1753119_1 von Willebrand factor, type A - - - 0.00000000000000000000000000000000000000000000000000000006598 210.0
DYD1_k127_1753119_2 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase - - - 0.000000000000000000000000000000000000000000000004211 200.0
DYD1_k127_1753119_3 PFAM von Willebrand factor type A - - - 0.000000000000000000000000000000000000000005515 169.0
DYD1_k127_1753119_4 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal K00648 - 2.3.1.180 0.000000000000000000000000000005457 127.0
DYD1_k127_1753119_5 protein phosphatase 2C domain protein - - - 0.0000000000000000000000005199 124.0
DYD1_k127_1753119_6 Responsible for synthesis of pseudouridine from uracil K06180 - 5.4.99.23 0.00000000000000008707 82.0
DYD1_k127_1790879_0 protease with the C-terminal PDZ domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002345 505.0
DYD1_k127_1790879_1 MFS_1 like family K08151,K08153 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000826 299.0
DYD1_k127_1790879_2 Enoyl-CoA hydratase/isomerase K01715,K13767 GO:0003674,GO:0003824,GO:0004300,GO:0006082,GO:0006629,GO:0006631,GO:0006635,GO:0008150,GO:0008152,GO:0009056,GO:0009062,GO:0009987,GO:0016042,GO:0016054,GO:0016829,GO:0016835,GO:0016836,GO:0019395,GO:0019752,GO:0030258,GO:0032787,GO:0034440,GO:0043436,GO:0044237,GO:0044238,GO:0044242,GO:0044248,GO:0044255,GO:0044281,GO:0044282,GO:0046395,GO:0055114,GO:0071704,GO:0072329,GO:1901575 4.2.1.17 0.0000000000000000000000000000000000000000000000000000000000000003833 228.0
DYD1_k127_1790879_3 Belongs to the thioredoxin family K03671,K03672 GO:0003674,GO:0003824,GO:0004791,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006950,GO:0006979,GO:0008150,GO:0008152,GO:0009636,GO:0009987,GO:0015035,GO:0015036,GO:0016209,GO:0016491,GO:0016651,GO:0016667,GO:0016668,GO:0016671,GO:0019725,GO:0033554,GO:0034599,GO:0042221,GO:0042592,GO:0044424,GO:0044444,GO:0044464,GO:0045454,GO:0047134,GO:0050789,GO:0050794,GO:0050896,GO:0051716,GO:0055114,GO:0065007,GO:0065008,GO:0070887,GO:0097237,GO:0098754,GO:0098869,GO:1990748 1.8.1.8 0.0000000000000000000000000000000000000004065 158.0
DYD1_k127_1790879_4 DoxX K15977 - - 0.000000000000000000000001217 109.0
DYD1_k127_1790879_5 Protein of unknown function (DUF3298) - - - 0.00000000000000005387 84.0
DYD1_k127_1803742_0 PFAM type II secretion system protein E K02283,K03609 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002253 565.0
DYD1_k127_1803742_1 growth - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003015 351.0
DYD1_k127_1803742_11 Putative Flp pilus-assembly TadE/G-like - - - 0.00000000000000000002566 105.0
DYD1_k127_1803742_12 PFAM TadE family protein - - - 0.000000000000003307 83.0
DYD1_k127_1803742_13 TadE-like protein - - - 0.00000000000001477 81.0
DYD1_k127_1803742_14 - - - - 0.000003005 57.0
DYD1_k127_1803742_15 TPR repeat - - - 0.00007541 54.0
DYD1_k127_1803742_2 Histidine kinase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002054 343.0
DYD1_k127_1803742_3 Belongs to the GSP D family K02280 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000264 297.0
DYD1_k127_1803742_4 Type II secretion system K12510 - - 0.000000000000000000000000000000000000000000000000000000000000000001755 241.0
DYD1_k127_1803742_5 PFAM response regulator receiver K02282 - - 0.0000000000000000000000000000000000000000000000000004123 200.0
DYD1_k127_1803742_6 Type II secretion system (T2SS), protein F K12511 - - 0.0000000000000000000000000000000000000000000000007674 186.0
DYD1_k127_1803742_7 response regulator K07685 - - 0.000000000000000000000000000000000000000000000001868 183.0
DYD1_k127_1803742_8 COG0741 Soluble lytic murein transglycosylase and related regulatory proteins (some contain LysM invasin domains) - - - 0.00000000000000000000000000000003572 138.0
DYD1_k127_1803742_9 von Willebrand factor, type A - - - 0.000000000000000000000003037 115.0
DYD1_k127_1804668_0 SMART PDZ DHR GLGF domain protein K11749 - - 0.000000000000000000000000000000000000000000003316 169.0
DYD1_k127_1804668_1 PFAM PDZ DHR GLGF domain protein - - - 0.00000000000000000000000000000004662 140.0
DYD1_k127_1804668_2 Gram-negative bacterial TonB protein C-terminal K03832 - - 0.00000003119 61.0
DYD1_k127_1817871_0 Succinyl-CoA synthetase functions in the citric acid cycle (TCA), coupling the hydrolysis of succinyl-CoA to the synthesis of either ATP or GTP and thus represents the only step of substrate-level phosphorylation in the TCA. The alpha subunit of the enzyme binds the substrates coenzyme A and phosphate, while succinate binding and nucleotide specificity is provided by the beta subunit K01902 - 6.2.1.5 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001668 430.0
DYD1_k127_1817871_1 Adenylate cyclase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002961 337.0
DYD1_k127_1817871_2 Major role in the synthesis of nucleoside triphosphates other than ATP. The ATP gamma phosphate is transferred to the NDP beta phosphate via a ping-pong mechanism, using a phosphorylated active-site intermediate K00940 - 2.7.4.6 0.000000000000000000000000000000000000000000000000000005051 192.0
DYD1_k127_1817871_3 NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient K00338 - 1.6.5.3 0.000000000000000000000000000000000000000000000004435 177.0
DYD1_k127_1817871_4 RNA-metabolising metallo-beta-lactamase K07576 - - 0.0000000004945 61.0
DYD1_k127_1818766_0 In eubacteria ppGpp (guanosine 3'-diphosphate 5-' diphosphate) is a mediator of the stringent response that coordinates a variety of cellular activities in response to changes in nutritional abundance K00951 - 2.7.6.5 7.709e-235 748.0
DYD1_k127_1818766_1 ABC transporter K06158 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000184 471.0
DYD1_k127_1818766_10 Tetratricopeptide repeat - - - 0.000000000000003588 85.0
DYD1_k127_1818766_2 MotA TolQ ExbB proton channel K03561,K03562 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000005542 265.0
DYD1_k127_1818766_3 PFAM Endoribonuclease L-PSP K09022 - 3.5.99.10 0.000000000000000000000000000000000000000000007684 167.0
DYD1_k127_1818766_4 Part of the Sec protein translocase complex. Interacts with the SecYEG preprotein conducting channel. SecDF uses the proton motive force (PMF) to complete protein translocation after the ATP-dependent function of SecA K03074 - - 0.0000000000000000000000000000000000004321 144.0
DYD1_k127_1818766_5 Peptidylprolyl isomerase K03771 - 5.2.1.8 0.000000000000000000000009779 114.0
DYD1_k127_1818766_6 PFAM Biopolymer transport protein ExbD TolR K03559,K03560 - - 0.00000000000000000000002661 106.0
DYD1_k127_1818766_7 Belongs to the bacterial ribosomal protein bL28 family K02902 GO:0003674,GO:0003735,GO:0005198 - 0.0000000000000000000005317 97.0
DYD1_k127_1818766_8 PFAM Biopolymer transport protein ExbD TolR K03559,K03560 - - 0.0000000000000001782 86.0
DYD1_k127_1818766_9 TIGRFAM TonB K03832 - - 0.000000000000002185 86.0
DYD1_k127_1823151_0 general secretion pathway protein - - - 0.00000000615 66.0
DYD1_k127_1823151_1 Protein conserved in bacteria - - - 0.00003528 55.0
DYD1_k127_1823151_2 Pilus assembly protein K02663 - - 0.00007821 53.0
DYD1_k127_1831741_0 NADH oxidase - - - 7.317e-210 662.0
DYD1_k127_1831741_1 Catalyzes the conversion of acetate into acetyl-CoA (AcCoA), an essential intermediate at the junction of anabolic and catabolic pathways. AcsA undergoes a two-step reaction. In the first half reaction, AcsA combines acetate with ATP to form acetyl-adenylate (AcAMP) intermediate. In the second half reaction, it can then transfer the acetyl group from AcAMP to the sulfhydryl group of CoA, forming the product AcCoA K04105,K04110 - 6.2.1.25,6.2.1.27 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001628 534.0
DYD1_k127_1831741_10 HD domain - - - 0.000000000000000000000000000000000000000003342 168.0
DYD1_k127_1831741_11 Endoribonuclease L-PSP - - - 0.0000000000000000000000000000000000005045 143.0
DYD1_k127_1831741_12 MobA-like NTP transferase domain K07141 - 2.7.7.76 0.00000000000000000000000000000001903 134.0
DYD1_k127_1831741_13 PFAM response regulator receiver K02483,K07658,K07668 - - 0.0000000000000000000004245 112.0
DYD1_k127_1831741_14 SCO1/SenC - - - 0.000000000000679 76.0
DYD1_k127_1831741_15 ATPase involved in DNA repair - - - 0.000000002622 63.0
DYD1_k127_1831741_2 Aminotransferase class-V K01556 - 3.7.1.3 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003576 473.0
DYD1_k127_1831741_3 Sigma-54 interaction domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002287 406.0
DYD1_k127_1831741_4 NADH:flavin oxidoreductase / NADH oxidase family K09461 - 1.14.13.40 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007453 374.0
DYD1_k127_1831741_5 Acyl-CoA dehydrogenase, C-terminal domain K00249 - 1.3.8.7 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000437 350.0
DYD1_k127_1831741_6 xanthine dehydrogenase activity K04109 - 1.3.7.9 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001631 328.0
DYD1_k127_1831741_7 PFAM Enoyl-CoA hydratase isomerase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001717 316.0
DYD1_k127_1831741_8 PAS domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000003216 302.0
DYD1_k127_1831741_9 Heme-dependent dioxygenase that catalyzes the oxidative cleavage of the L-tryptophan (L-Trp) pyrrole ring and converts L- tryptophan to N-formyl-L-kynurenine. Catalyzes the oxidative cleavage of the indole moiety K00453 GO:0003674,GO:0003824,GO:0004833,GO:0005488,GO:0006082,GO:0006520,GO:0006568,GO:0006569,GO:0006576,GO:0006586,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0009056,GO:0009063,GO:0009072,GO:0009074,GO:0009308,GO:0009310,GO:0009987,GO:0016043,GO:0016054,GO:0016491,GO:0016701,GO:0016702,GO:0019439,GO:0019441,GO:0019752,GO:0020037,GO:0022607,GO:0034641,GO:0042180,GO:0042402,GO:0042430,GO:0042436,GO:0042537,GO:0043436,GO:0043933,GO:0044085,GO:0044106,GO:0044237,GO:0044238,GO:0044248,GO:0044270,GO:0044281,GO:0044282,GO:0046218,GO:0046395,GO:0046483,GO:0046700,GO:0046906,GO:0048037,GO:0051213,GO:0051259,GO:0051260,GO:0051262,GO:0051289,GO:0055114,GO:0065003,GO:0070189,GO:0071704,GO:0071840,GO:0097159,GO:1901360,GO:1901361,GO:1901363,GO:1901564,GO:1901565,GO:1901575,GO:1901605,GO:1901606 1.13.11.11 0.0000000000000000000000000000000000000000000000000000000000000009826 227.0
DYD1_k127_1838067_0 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007062 535.0
DYD1_k127_1838067_1 von Willebrand factor (vWF) type A domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001083 461.0
DYD1_k127_1838067_2 Extradiol ring-cleavage dioxygenase, class III K06990,K09141 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005095 346.0
DYD1_k127_1838067_3 Protein of unknown function DUF2625 - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000137 251.0
DYD1_k127_1838067_4 Catalyzes the oxidation of either pyridoxine 5'- phosphate (PNP) or pyridoxamine 5'-phosphate (PMP) into pyridoxal 5'-phosphate (PLP) K00275 - 1.4.3.5 0.000000000000000000000000000000000000000000000000000000000000000000000002928 252.0
DYD1_k127_1838067_5 Alpha beta hydrolase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000001468 250.0
DYD1_k127_1838067_6 TIGRFAM geranylgeranyl reductase - - - 0.000000000000000000000000000000000000000000000002824 195.0
DYD1_k127_1838067_7 A type II topoisomerase that negatively supercoils closed circular double-stranded (ds) DNA in an ATP-dependent manner to modulate DNA topology and maintain chromosomes in an underwound state. Negative supercoiling favors strand separation, and DNA replication, transcription, recombination and repair, all of which involve strand separation. Also able to catalyze the interconversion of other topological isomers of dsDNA rings, including catenanes and knotted rings. Type II topoisomerases break and join 2 DNA strands simultaneously in an ATP-dependent manner K02470 - 5.99.1.3 0.0000000000000000000000000000000000000000000006245 175.0
DYD1_k127_1838067_8 Thioesterase superfamily K07107 - - 0.00000000000000000000002504 104.0
DYD1_k127_1850541_0 gluconolactonase activity - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001327 385.0
DYD1_k127_1850541_1 ThiF family K21029 - 2.7.7.80 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001037 366.0
DYD1_k127_1850541_2 EamA-like transporter family - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000006539 274.0
DYD1_k127_1850541_3 Aminoglycoside/hydroxyurea antibiotic resistance kinase K04343,K12570 - 2.7.1.72 0.0004605 44.0
DYD1_k127_1852263_0 ABC-type Zn2 transport system, periplasmic component surface adhesin - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004357 370.0
DYD1_k127_1852263_1 Cytochrome C oxidase, cbb3-type, subunit III - - - 0.0000000000000000000001725 98.0
DYD1_k127_1854667_0 Catalyzes the removal of elemental sulfur and selenium atoms from L-cysteine, L-cystine, L-selenocysteine, and L- selenocystine to produce L-alanine K11717 - 2.8.1.7,4.4.1.16 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004771 586.0
DYD1_k127_1854667_1 Uncharacterized protein family (UPF0051) K09015 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001011 309.0
DYD1_k127_1854667_2 DNA/RNA non-specific endonuclease K01173 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000007955 292.0
DYD1_k127_1854667_3 NifU-like N terminal domain K04488 GO:0003674,GO:0003824,GO:0005488,GO:0005506,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006807,GO:0006873,GO:0006875,GO:0006879,GO:0008150,GO:0008152,GO:0008198,GO:0009987,GO:0010467,GO:0016740,GO:0016782,GO:0019538,GO:0019725,GO:0030003,GO:0036455,GO:0042592,GO:0043167,GO:0043169,GO:0043170,GO:0044238,GO:0044424,GO:0044464,GO:0046872,GO:0046914,GO:0046916,GO:0048037,GO:0048878,GO:0050801,GO:0051536,GO:0051537,GO:0051539,GO:0051540,GO:0051604,GO:0055065,GO:0055072,GO:0055076,GO:0055080,GO:0055082,GO:0065007,GO:0065008,GO:0071704,GO:0097428,GO:0098771,GO:1901564 - 0.00000000000000000000000000000000000000000000000000001795 192.0
DYD1_k127_1854667_4 nucleoside hydrolase - - - 0.00000000000000000000000000000000171 151.0
DYD1_k127_1854667_5 endonuclease exonuclease phosphatase K07004 - - 0.00000000000000000000000000008516 135.0
DYD1_k127_1858555_0 ASPIC and UnbV - - - 3.994e-217 689.0
DYD1_k127_1858555_1 Acyl-CoA dehydrogenase, C-terminal domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001769 498.0
DYD1_k127_1858555_10 CarboxypepD_reg-like domain - - - 0.000000000000000000000000000000000000000000000005486 184.0
DYD1_k127_1858555_11 - - - - 0.00000000000000000000000000000000001324 143.0
DYD1_k127_1858555_12 Endoribonuclease L-PSP - - - 0.00000000000000000000000000000008603 128.0
DYD1_k127_1858555_13 Low molecular weight phosphotyrosine protein phosphatase K01104,K20201 - 3.1.3.48,3.9.1.2 0.000000000000000000006312 108.0
DYD1_k127_1858555_14 Uncharacterized ACR, YdiU/UPF0061 family - - - 0.0000000001167 75.0
DYD1_k127_1858555_2 beta-fructofuranosidase activity - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001736 330.0
DYD1_k127_1858555_3 Phosphofructokinase K21071 - 2.7.1.11,2.7.1.90 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006353 314.0
DYD1_k127_1858555_4 transferase activity, transferring glycosyl groups K00713,K06338 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000005282 278.0
DYD1_k127_1858555_5 - - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000008747 275.0
DYD1_k127_1858555_6 PFAM ROK family - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000001584 262.0
DYD1_k127_1858555_7 shikimate 3-dehydrogenase (NADP+) activity K00014,K13832 GO:0000166,GO:0003674,GO:0003824,GO:0003855,GO:0004764,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006082,GO:0008150,GO:0008152,GO:0009058,GO:0009423,GO:0009987,GO:0016053,GO:0016491,GO:0016614,GO:0016616,GO:0016829,GO:0016835,GO:0016836,GO:0019632,GO:0019752,GO:0032787,GO:0036094,GO:0043436,GO:0043648,GO:0043650,GO:0044237,GO:0044249,GO:0044281,GO:0044283,GO:0044424,GO:0044444,GO:0044464,GO:0046394,GO:0046417,GO:0048037,GO:0050661,GO:0050662,GO:0055114,GO:0071704,GO:0097159,GO:1901265,GO:1901363,GO:1901576,GO:1901615 1.1.1.25,4.2.1.10 0.000000000000000000000000000000000000000000000000000000000000000000001148 254.0
DYD1_k127_1858555_8 carbamoyl-phosphate synthase (glutamine-hydrolyzing) activity - - - 0.000000000000000000000000000000000000000000000000000000000009398 219.0
DYD1_k127_1858555_9 beta-fructofuranosidase activity - - - 0.00000000000000000000000000000000000000000000000000307 203.0
DYD1_k127_187345_0 transport - - - 1.704e-300 960.0
DYD1_k127_187345_1 beta-lactamase - - - 2.222e-256 813.0
DYD1_k127_187345_2 Aminobenzoate synthetase K01665,K03342,K13950 - 2.6.1.85,4.1.3.38 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002249 497.0
DYD1_k127_187345_3 Glycoside hydrolase family 3 domain protein K01207 - 3.2.1.52 0.0000000000000008029 79.0
DYD1_k127_187345_4 PFAM Stage II sporulation K07315 - 3.1.3.3 0.0000543 48.0
DYD1_k127_1877448_0 Helicase K03724 - - 2.976e-310 975.0
DYD1_k127_1877448_1 metalloendopeptidase activity K01283 - 3.4.15.1 9.253e-254 799.0
DYD1_k127_1877448_2 metal cluster binding - - - 0.000000000000000000000000000000000000003295 153.0
DYD1_k127_1877448_3 YCII-related domain - - - 0.0000000009862 64.0
DYD1_k127_1880562_0 two component, sigma54 specific, transcriptional regulator, Fis family K02481 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002343 395.0
DYD1_k127_1880562_1 ABC transporter K01990 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000003355 283.0
DYD1_k127_1880562_2 - - - - 0.00000000000000000000000000000000000000000000000000005591 196.0
DYD1_k127_1880562_3 peptidyl-tyrosine sulfation - - - 0.0000000000000000000000000000000000006132 156.0
DYD1_k127_1880562_4 cheY-homologous receiver domain - - - 0.00000000000000000000000009205 111.0
DYD1_k127_1880562_5 transferase activity, transferring acyl groups other than amino-acyl groups - - - 0.00000000000000002511 92.0
DYD1_k127_1880562_6 Nodulation protein S (NodS) - - - 0.0000000000004387 79.0
DYD1_k127_1880562_7 His Kinase A (phosphoacceptor) domain K02668,K07709 - 2.7.13.3 0.00007694 53.0
DYD1_k127_1880562_8 6-pyruvoyl-tetrahydropterin synthase related domain; membrane protein - - - 0.0008296 49.0
DYD1_k127_1886890_0 ASPIC and UnbV - - - 1.253e-246 777.0
DYD1_k127_1886890_1 peroxiredoxin activity - - - 6.597e-233 726.0
DYD1_k127_1886890_2 electron transport chain K00347,K03614,K21163 - 1.6.5.8 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007359 332.0
DYD1_k127_1886890_3 ROK family - - - 0.00000000000000000000000000000000000000000000000000000000000001179 230.0
DYD1_k127_1891848_0 Phosphoenolpyruvate phosphomutase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000001449 254.0
DYD1_k127_1891848_1 Protein of unknown function (DUF962) - - - 0.000000000000000000000000000000000005388 138.0
DYD1_k127_1891848_2 XdhC Rossmann domain K07402 - - 0.0000000000000000000000000000000002087 142.0
DYD1_k127_1891848_3 Xanthine and CO dehydrogenases maturation factor XdhC CoxF K07402 - - 0.00000000000000000000007884 102.0
DYD1_k127_1892314_0 Carboxypeptidase regulatory-like domain - - - 5.556e-203 679.0
DYD1_k127_1892314_1 Belongs to the aspartate-semialdehyde dehydrogenase family K00133 - 1.2.1.11 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006606 385.0
DYD1_k127_1892314_2 Aminotransferase K10907 - - 0.00000000000000000000000000000000112 137.0
DYD1_k127_1892314_3 Belongs to the CarA family K01956 - 6.3.5.5 0.0000001793 59.0
DYD1_k127_189332_0 Cell wall formation. Catalyzes the addition of glutamate to the nucleotide precursor UDP-N-acetylmuramoyl-L-alanine (UMA) K01925 - 6.3.2.9 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000125 406.0
DYD1_k127_189332_1 First step of the lipid cycle reactions in the biosynthesis of the cell wall peptidoglycan K01000 - 2.7.8.13 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000727 354.0
DYD1_k127_189332_2 Belongs to the SEDS family K03588 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006756 336.0
DYD1_k127_189332_3 Involved in cell wall formation. Catalyzes the final step in the synthesis of UDP-N-acetylmuramoyl-pentapeptide, the precursor of murein K01929 - 6.3.2.10 0.00000000000000000000000000000000008553 140.0
DYD1_k127_189332_4 Cell wall formation. Catalyzes the transfer of a GlcNAc subunit on undecaprenyl-pyrophosphoryl-MurNAc-pentapeptide (lipid intermediate I) to form undecaprenyl-pyrophosphoryl-MurNAc- (pentapeptide)GlcNAc (lipid intermediate II) K02563 - 2.4.1.227 0.0000000000000001272 81.0
DYD1_k127_1899042_0 Subtilase family K14645 GO:0005575,GO:0005576 - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008631 356.0
DYD1_k127_1899042_1 Specifically methylates the N3 position of the uracil ring of uridine 1498 (m3U1498) in 16S rRNA. Acts on the fully assembled 30S ribosomal subunit K09761 - 2.1.1.193 0.000000000000000000000000000000000000002351 155.0
DYD1_k127_1899042_2 domain, Protein - - - 0.000002251 55.0
DYD1_k127_1915257_0 NAD-dependent epimerase dehydratase K01784,K17947 - 5.1.3.2,5.1.3.25 0.0000000000000000000000000003797 125.0
DYD1_k127_1915257_2 Methyltransferase - - - 0.00000000000000000001624 105.0
DYD1_k127_1941044_0 TIGRFAM carbamoyl-phosphate synthase, large subunit K01955 - 6.3.5.5 0.0 1381.0
DYD1_k127_1941044_1 CoA binding domain K06929 - - 0.000000000000000000000000000000003124 134.0
DYD1_k127_1948138_0 Belongs to the 5'-nucleotidase family K11751 - 3.1.3.5,3.6.1.45 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002245 527.0
DYD1_k127_1948138_1 Zinc-binding dehydrogenase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009265 394.0
DYD1_k127_1948138_10 Thioredoxin-like - - - 0.00000000000000000000000000000000000000000002133 170.0
DYD1_k127_1948138_11 photosynthesis - - - 0.00000000000000000000000000000000000000001218 158.0
DYD1_k127_1948138_12 Belongs to the Fur family K09825 GO:0000976,GO:0001067,GO:0001130,GO:0001216,GO:0001217,GO:0003674,GO:0003676,GO:0003677,GO:0003690,GO:0003700,GO:0005488,GO:0005575,GO:0006355,GO:0008150,GO:0009889,GO:0009890,GO:0009891,GO:0009892,GO:0009893,GO:0010468,GO:0010556,GO:0010557,GO:0010558,GO:0010604,GO:0010605,GO:0010628,GO:0010629,GO:0019219,GO:0019222,GO:0031323,GO:0031324,GO:0031325,GO:0031326,GO:0031327,GO:0031328,GO:0032991,GO:0032993,GO:0043565,GO:0044212,GO:0045892,GO:0045893,GO:0045934,GO:0045935,GO:0048518,GO:0048519,GO:0048522,GO:0048523,GO:0050789,GO:0050794,GO:0051171,GO:0051172,GO:0051173,GO:0051252,GO:0051253,GO:0051254,GO:0060255,GO:0065007,GO:0080090,GO:0097159,GO:0140110,GO:1901363,GO:1902679,GO:1902680,GO:1903506,GO:1903507,GO:1903508,GO:1990837,GO:2000112,GO:2000113,GO:2001141 - 0.0000000000000000000000000000001923 128.0
DYD1_k127_1948138_13 Thioesterase superfamily K10806 - - 0.0000000000000000000000000008627 117.0
DYD1_k127_1948138_14 Domain of unknown function (DUF4112) - - - 0.00000000000000000000000002524 115.0
DYD1_k127_1948138_15 PAS domain K13924 - 2.1.1.80,3.1.1.61 0.00000000000000000000003155 106.0
DYD1_k127_1948138_16 Integral membrane protein CcmA involved in cell shape determination - - - 0.00000000000000000000009725 106.0
DYD1_k127_1948138_2 Catalyzes the ATP-dependent 2-thiolation of cytidine in position 32 of tRNA, to form 2-thiocytidine (s(2)C32). The sulfur atoms are provided by the cysteine cysteine desulfurase (IscS) system K14058 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003285 342.0
DYD1_k127_1948138_3 Catalyzes the radical-mediated insertion of two sulfur atoms into the C-6 and C-8 positions of the octanoyl moiety bound to the lipoyl domains of lipoate-dependent enzymes, thereby converting the octanoylated domains into lipoylated derivatives - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005645 311.0
DYD1_k127_1948138_4 Redoxin - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000007695 278.0
DYD1_k127_1948138_5 Male sterility protein - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000007369 263.0
DYD1_k127_1948138_7 Peptidase family M1 domain - - - 0.000000000000000000000000000000000000000000000000008972 203.0
DYD1_k127_1948138_8 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD K03768 - 5.2.1.8 0.0000000000000000000000000000000000000000000000001402 200.0
DYD1_k127_1948138_9 - K07018 - - 0.0000000000000000000000000000000000000000000000001616 184.0
DYD1_k127_195729_0 Zn peptidase - - - 0.00000000000000000000000000000000000004468 154.0
DYD1_k127_195729_1 PFAM thioesterase superfamily K07107 - - 0.000000000000000000000000000000000002568 146.0
DYD1_k127_195729_2 Tetratricopeptide repeat - - - 0.0000000000000000000000001216 114.0
DYD1_k127_195729_3 PFAM Glycosyl hydrolase family 3 N terminal domain K01207 - 3.2.1.52 0.0002547 45.0
DYD1_k127_1958148_0 serine threonine protein kinase K08884,K12132 - 2.7.11.1 0.00000000000000000000000000000000000000000000000000000000000000000000002443 261.0
DYD1_k127_1958148_1 Transfers the gamma-phosphate of ATP to the 4'-position of a tetraacyldisaccharide 1-phosphate intermediate (termed DS-1- P) to form tetraacyldisaccharide 1,4'-bis-phosphate (lipid IVA) K00912 - 2.7.1.130 0.0000000000004289 72.0
DYD1_k127_195931_0 tetratricopeptide - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006475 563.0
DYD1_k127_195931_1 extracellular solute-binding protein, family 5 K02035 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000602 287.0
DYD1_k127_195931_2 Pfam:DUF2305 - - - 0.00000000000000000000000000000000000000000000000000000000000000006263 250.0
DYD1_k127_195931_3 TatD related DNase K03424 - - 0.00000000000000000000000000000000000000000000000000046 187.0
DYD1_k127_195931_4 Glycosyl hydrolase family 3 N-terminal domain protein K01207 - 3.2.1.52 0.0000000000000000000000000000000000000000000004452 178.0
DYD1_k127_195931_5 DinB superfamily - - - 0.000000000000000000000000000000000000000000004503 171.0
DYD1_k127_197459_0 Peptidase dimerisation domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003626 597.0
DYD1_k127_197459_1 PFAM NADPH-dependent FMN reductase - - - 0.00000000000000000000000000000000000000000000000000000000001178 213.0
DYD1_k127_199738_0 Amidohydrolase family K06015 - 3.5.1.81 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001107 553.0
DYD1_k127_199738_1 Domain of Unknown Function with PDB structure (DUF3857) - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001063 498.0
DYD1_k127_199738_2 Protein of unknown function (DUF4199) - - - 0.000000000000000000000000000000000000000000000000000002123 197.0
DYD1_k127_199738_3 helix_turn_helix, Lux Regulon - - - 0.0000000000000000000000000000000000000000000003112 171.0
DYD1_k127_2010861_0 Involved in targeting and insertion of nascent membrane proteins into the cytoplasmic membrane. Binds to the hydrophobic signal sequence of the ribosome-nascent chain (RNC) as it emerges from the ribosomes. The SRP-RNC complex is then targeted to the cytoplasmic membrane where it interacts with the SRP receptor FtsY K03106 - 3.6.5.4 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006739 494.0
DYD1_k127_2010861_1 Domain of unknown function (DUF1972) K12996 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005401 413.0
DYD1_k127_2010861_10 Bacterial transcriptional activator domain - - - 0.0000002954 62.0
DYD1_k127_2010861_2 Belongs to the RNA methyltransferase TrmD family K00554 GO:0001510,GO:0003674,GO:0003824,GO:0006139,GO:0006396,GO:0006399,GO:0006400,GO:0006725,GO:0006807,GO:0008033,GO:0008150,GO:0008152,GO:0008168,GO:0008173,GO:0008175,GO:0008757,GO:0009019,GO:0009451,GO:0009987,GO:0010467,GO:0016070,GO:0016423,GO:0016740,GO:0016741,GO:0016772,GO:0016779,GO:0030488,GO:0032259,GO:0034470,GO:0034641,GO:0034660,GO:0043170,GO:0043412,GO:0043414,GO:0044237,GO:0044238,GO:0044260,GO:0046483,GO:0050518,GO:0070567,GO:0071704,GO:0090304,GO:0140098,GO:0140101,GO:1901360 2.1.1.228 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000005743 278.0
DYD1_k127_2010861_3 PFAM Glycosyl transferase, group 1 - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000001011 265.0
DYD1_k127_2010861_4 This protein is located at the 30S-50S ribosomal subunit interface and may play a role in the structure and function of the aminoacyl-tRNA binding site K02884 - - 0.00000000000000000000000000000000000000002488 156.0
DYD1_k127_2010861_5 - - - - 0.0000000000000000000000000000000002848 147.0
DYD1_k127_2010861_6 An accessory protein needed during the final step in the assembly of 30S ribosomal subunit, possibly for assembly of the head region. Probably interacts with S19. Essential for efficient processing of 16S rRNA. May be needed both before and after RbfA during the maturation of 16S rRNA. It has affinity for free ribosomal 30S subunits but not for 70S ribosomes K02860 - - 0.000000000000000000000001781 110.0
DYD1_k127_2010861_7 Belongs to the bacterial ribosomal protein bS16 family K02959 GO:0003674,GO:0003735,GO:0005198,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005840,GO:0006412,GO:0006518,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0015935,GO:0019538,GO:0032991,GO:0034641,GO:0034645,GO:0043043,GO:0043170,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044446,GO:0044464,GO:0071704,GO:1901564,GO:1901566,GO:1901576,GO:1990904 - 0.00000000000000000001072 96.0
DYD1_k127_2010861_8 KH domain K06960 - - 0.000000000000003879 78.0
DYD1_k127_2010861_9 Part of the Sec protein translocase complex. Interacts with the SecYEG preprotein conducting channel. Has a central role in coupling the hydrolysis of ATP to the transfer of proteins into and across the cell membrane, serving both as a receptor for the preprotein-SecB complex and as an ATP-driven molecular motor driving the stepwise translocation of polypeptide chains across the membrane K03070 GO:0000166,GO:0002790,GO:0003674,GO:0003824,GO:0005215,GO:0005488,GO:0005515,GO:0005524,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005886,GO:0005887,GO:0006457,GO:0006605,GO:0006810,GO:0006886,GO:0008104,GO:0008144,GO:0008150,GO:0008320,GO:0008565,GO:0009306,GO:0009987,GO:0015031,GO:0015399,GO:0015405,GO:0015440,GO:0015450,GO:0015462,GO:0015833,GO:0016020,GO:0016021,GO:0016462,GO:0016787,GO:0016817,GO:0016818,GO:0016887,GO:0017076,GO:0017111,GO:0022804,GO:0022857,GO:0022884,GO:0030554,GO:0031224,GO:0031226,GO:0031522,GO:0032553,GO:0032555,GO:0032559,GO:0032940,GO:0032991,GO:0033036,GO:0033220,GO:0034613,GO:0035639,GO:0036094,GO:0042623,GO:0042626,GO:0042802,GO:0042886,GO:0042887,GO:0043167,GO:0043168,GO:0043492,GO:0043952,GO:0044424,GO:0044425,GO:0044444,GO:0044459,GO:0044464,GO:0045184,GO:0046903,GO:0046907,GO:0051179,GO:0051234,GO:0051641,GO:0051649,GO:0055085,GO:0061077,GO:0065002,GO:0070727,GO:0071702,GO:0071705,GO:0071806,GO:0071944,GO:0097159,GO:0097367,GO:1901265,GO:1901363,GO:1904680 - 0.00000000000006329 73.0
DYD1_k127_2012796_0 Zinc-binding dehydrogenase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002989 441.0
DYD1_k127_2012796_1 Bacterial extracellular solute-binding protein K02027 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007405 398.0
DYD1_k127_2012796_2 glycerophosphodiester transmembrane transport K02026 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001066 306.0
DYD1_k127_2012796_3 acetyltransferase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000001885 271.0
DYD1_k127_2012796_4 transmembrane transport K02025,K15771 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000006503 270.0
DYD1_k127_2012796_5 Aldehyde dehydrogenase family K00135 - 1.2.1.16,1.2.1.20,1.2.1.79 0.0000000000000000000000000000000000000000000000000000000000000000000000000003748 260.0
DYD1_k127_2012796_6 Belongs to the ABC transporter superfamily K10112 - - 0.00000000000000003522 83.0
DYD1_k127_202628_0 PFAM asparagine synthase K01953 - 6.3.5.4 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002751 595.0
DYD1_k127_202628_1 PFAM NAD-dependent epimerase dehydratase K01784 - 5.1.3.2 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006174 511.0
DYD1_k127_202628_2 AMP-binding enzyme K01897 - 6.2.1.3 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001369 484.0
DYD1_k127_202628_3 PFAM Glycosyl transferase family 4 K02851 - 2.7.8.33,2.7.8.35 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001366 417.0
DYD1_k127_202628_4 Nucleotidyl transferase K00973 - 2.7.7.24 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002429 368.0
DYD1_k127_202628_5 Glycosyl transferase 4-like - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000002058 287.0
DYD1_k127_202628_6 O-Antigen ligase K02847 - - 0.000000000000000000000000000000000000000002202 173.0
DYD1_k127_202628_7 Methyltransferase domain - - - 0.00000000000000000001211 103.0
DYD1_k127_202628_8 lipopolysaccharide metabolic process K08309,K19804 - - 0.000000005107 66.0
DYD1_k127_202628_9 SMART Tetratricopeptide domain protein - - - 0.00004383 52.0
DYD1_k127_2048452_0 it plays a direct role in the translocation of protons across the membrane K02108 - - 0.000000000000000000000000000000000000000000654 168.0
DYD1_k127_2048452_1 F(1)F(0) ATP synthase produces ATP from ADP in the presence of a proton or sodium gradient. F-type ATPases consist of two structural domains, F(1) containing the extramembraneous catalytic core and F(0) containing the membrane proton channel, linked together by a central stalk and a peripheral stalk. During catalysis, ATP synthesis in the catalytic domain of F(1) is coupled via a rotary mechanism of the central stalk subunits to proton translocation K02110 - - 0.000000000000001284 81.0
DYD1_k127_2048452_2 Radical SAM superfamily - - - 0.000000000009593 68.0
DYD1_k127_2048452_3 function for this protein is to guide the assembly of the membrane sector of the ATPase enzyme complex K02116 - - 0.000008454 53.0
DYD1_k127_2053383_0 Phage tail sheath C-terminal domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000107 301.0
DYD1_k127_2053383_1 - - - - 0.000000000000000000000000000000000000000006767 159.0
DYD1_k127_2053383_2 - - - - 0.000000000000000000000000000000000002299 143.0
DYD1_k127_2053383_3 - - - - 0.0004861 48.0
DYD1_k127_2069097_0 Belongs to the prokaryotic molybdopterin-containing oxidoreductase family K00372,K02567 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002648 429.0
DYD1_k127_2069097_1 Voltage-dependent anion channel - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005546 342.0
DYD1_k127_2069097_2 4Fe-4S dicluster domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000003232 240.0
DYD1_k127_2069097_3 oxidoreductase activity, acting on diphenols and related substances as donors - - - 0.0000000000000000000000000000000001431 139.0
DYD1_k127_2069097_4 Acetyltransferase (GNAT) domain - - - 0.000000000000000000003284 100.0
DYD1_k127_2078099_0 Sigma-70 region 2 K03088 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001417 573.0
DYD1_k127_2078099_1 UvrD-like helicase C-terminal domain K03657 - 3.6.4.12 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000457 519.0
DYD1_k127_2078099_10 YCII-related domain - - - 0.00000000000000000000000000000000000000000000000007842 180.0
DYD1_k127_2078099_11 hydrolase activity, acting on ester bonds - - - 0.00000000000000000000000000000000000000000000000154 184.0
DYD1_k127_2078099_12 Catalyzes the decarboxylation of S-adenosylmethionine to S-adenosylmethioninamine (dcAdoMet), the propylamine donor required for the synthesis of the polyamines spermine and spermidine from the diamine putrescine K00797,K01611 - 2.5.1.16,4.1.1.50 0.0000000000000000000000000000002417 127.0
DYD1_k127_2078099_14 hydroperoxide reductase activity - - - 0.0000000000000000000008514 98.0
DYD1_k127_2078099_15 Transglycosylase associated protein - - - 0.00000000000000000005475 92.0
DYD1_k127_2078099_2 Histidine kinase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008501 471.0
DYD1_k127_2078099_3 Formamidopyrimidine-DNA glycosylase H2TH domain K10563 - 3.2.2.23,4.2.99.18 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003545 398.0
DYD1_k127_2078099_4 Mut7-C RNAse domain K00525 - 1.17.4.1 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003085 391.0
DYD1_k127_2078099_5 Transcriptional regulatory protein, C terminal - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001257 342.0
DYD1_k127_2078099_6 WD40 domain protein beta Propeller K08884,K12132 - 2.7.11.1 0.000000000000000000000000000000000000000000000000000000000000000002765 256.0
DYD1_k127_2078099_7 glyoxalase bleomycin resistance protein dioxygenase K04750 - - 0.000000000000000000000000000000000000000000000000000000000001177 213.0
DYD1_k127_2078099_8 3-demethylubiquinone-9 3-methyltransferase K04750 - - 0.00000000000000000000000000000000000000000000000000000008655 197.0
DYD1_k127_2078099_9 phosphoserine phosphatase activity K07315,K16928 - 3.1.3.3 0.0000000000000000000000000000000000000000000000000000002009 206.0
DYD1_k127_2086539_0 DNA internalization-related competence protein ComEC Rec2 K02238 - - 0.000000000000000000000000000000000000000000000000000000000000000000000001846 274.0
DYD1_k127_2086539_1 Belongs to the class I-like SAM-binding methyltransferase superfamily. RNA M5U methyltransferase family K03215 - 2.1.1.190 0.000000000000000000000000000000000000000000001464 170.0
DYD1_k127_2169652_0 Part of the Sec protein translocase complex. Interacts with the SecYEG preprotein conducting channel. Has a central role in coupling the hydrolysis of ATP to the transfer of proteins into and across the cell membrane, serving as an ATP-driven molecular motor driving the stepwise translocation of polypeptide chains across the membrane K03070 - - 1.289e-317 994.0
DYD1_k127_2169652_1 PFAM aminotransferase, class I K10907 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003086 545.0
DYD1_k127_2169652_10 Regulatory protein, FmdB family - - - 0.0000000000000000000461 94.0
DYD1_k127_2169652_11 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase - - - 0.000000001455 70.0
DYD1_k127_2169652_12 TIGRFAM VWFA-related Acidobacterial domain - - - 0.0000000164 66.0
DYD1_k127_2169652_13 RNA helicase - GO:0000003,GO:0000373,GO:0000375,GO:0000377,GO:0003006,GO:0003674,GO:0003676,GO:0003723,GO:0003724,GO:0003824,GO:0004004,GO:0004386,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005634,GO:0005730,GO:0005737,GO:0006139,GO:0006396,GO:0006397,GO:0006725,GO:0006807,GO:0006810,GO:0007275,GO:0008026,GO:0008150,GO:0008152,GO:0008186,GO:0008380,GO:0009507,GO:0009532,GO:0009536,GO:0009570,GO:0009790,GO:0009791,GO:0009793,GO:0009892,GO:0009987,GO:0010154,GO:0010467,GO:0010468,GO:0010494,GO:0010496,GO:0010497,GO:0010501,GO:0010605,GO:0010608,GO:0010629,GO:0016070,GO:0016071,GO:0016441,GO:0016458,GO:0016462,GO:0016787,GO:0016817,GO:0016818,GO:0016887,GO:0017111,GO:0019222,GO:0022414,GO:0031974,GO:0031981,GO:0032501,GO:0032502,GO:0032991,GO:0034641,GO:0035770,GO:0036464,GO:0040029,GO:0042623,GO:0043170,GO:0043226,GO:0043227,GO:0043228,GO:0043229,GO:0043231,GO:0043232,GO:0043233,GO:0044237,GO:0044238,GO:0044422,GO:0044424,GO:0044428,GO:0044434,GO:0044435,GO:0044444,GO:0044446,GO:0044464,GO:0046483,GO:0048316,GO:0048519,GO:0048608,GO:0048731,GO:0048856,GO:0050789,GO:0051179,GO:0051234,GO:0060255,GO:0061458,GO:0065007,GO:0070013,GO:0070035,GO:0071704,GO:0090304,GO:0097159,GO:0140098,GO:1901360,GO:1901363,GO:1990904 - 0.00000002091 65.0
DYD1_k127_2169652_14 Domain of unknown function (DUF4388) K12132 - 2.7.11.1 0.0004763 51.0
DYD1_k127_2169652_2 imidazolonepropionase activity K00466 - 1.13.12.3 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002413 527.0
DYD1_k127_2169652_3 tRNA (guanine(37)-N(1))-methyltransferase activity - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005291 417.0
DYD1_k127_2169652_4 von Willebrand factor, type A - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000004444 272.0
DYD1_k127_2169652_5 DEAD DEAH box helicase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000004615 259.0
DYD1_k127_2169652_6 Transglycosylase SLT domain K08309 - - 0.0000000000000000000000000000000000000000000000000000000000003473 237.0
DYD1_k127_2169652_7 DEAD DEAH box helicase - - - 0.000000000000000000000000000000000000000000001107 176.0
DYD1_k127_2169652_8 Response regulator receiver - - - 0.000000000000000000000008611 105.0
DYD1_k127_2169652_9 nuclear chromosome segregation - - - 0.0000000000000000000003365 111.0
DYD1_k127_2197135_0 TIGRFAM YD repeat protein - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001242 559.0
DYD1_k127_2197135_1 D-xylulose 5-phosphate D-fructose 6-phosphate phosphoketolase K01621 - 4.1.2.22,4.1.2.9 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003081 508.0
DYD1_k127_2199403_0 ABC transporter transmembrane region K06147 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006873 346.0
DYD1_k127_2199403_1 With LigD forms a non-homologous end joining (NHEJ) DNA repair enzyme, which repairs dsDNA breaks with reduced fidelity. Binds linear dsDNA with 5'- and 3'- overhangs but not closed circular dsDNA nor ssDNA. Recruits and stimulates the ligase activity of LigD K10979 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000001973 267.0
DYD1_k127_2199403_2 With LigD forms a non-homologous end joining (NHEJ) DNA repair enzyme, which repairs dsDNA breaks with reduced fidelity. Binds linear dsDNA with 5'- and 3'- overhangs but not closed circular dsDNA nor ssDNA. Recruits and stimulates the ligase activity of LigD K10979 - - 0.0000000000000000000000000000000000000000000000000000000000000005424 228.0
DYD1_k127_2199403_3 MatE - - - 0.00000000000000000000000000000000000000000002928 162.0
DYD1_k127_2199403_4 sequence-specific DNA binding - - - 0.000000000000000000000000000000001236 141.0
DYD1_k127_2199403_5 sequence-specific DNA binding - - - 0.0000000000000004738 88.0
DYD1_k127_2199403_6 TIGRFAM asparagine synthase (glutamine-hydrolyzing) K01953 - 6.3.5.4 0.0000000034 62.0
DYD1_k127_2199403_7 Transglutaminase-like superfamily - - - 0.0000003751 61.0
DYD1_k127_2229098_0 Acyclic terpene utilisation family protein AtuA - - - 1.643e-211 665.0
DYD1_k127_2229098_1 Belongs to the enoyl-CoA hydratase isomerase family K13766 - 4.2.1.18 0.0000000000000000000000000000000000000000002616 163.0
DYD1_k127_2229098_2 - - - - 0.0000000000000000000000000000000000000000003093 160.0
DYD1_k127_2229098_3 Carboxyl transferase domain - - - 0.000000000005178 67.0
DYD1_k127_2239550_0 Peptidase M14, carboxypeptidase A - - - 0.0 1177.0
DYD1_k127_2239550_1 Belongs to the prokaryotic molybdopterin-containing oxidoreductase family - - - 0.0 1065.0
DYD1_k127_2239550_10 DNA repair enzyme that has both DNA N-glycosylase activity and AP-lyase activity. The DNA N-glycosylase activity releases various damaged pyrimidines from DNA by cleaving the N- glycosidic bond, leaving an AP (apurinic apyrimidinic) site. The AP-lyase activity cleaves the phosphodiester bond 3' to the AP site by a beta-elimination, leaving a 3'-terminal unsaturated sugar and a product with a terminal 5'-phosphate K10773 - 4.2.99.18 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000001536 288.0
DYD1_k127_2239550_11 Transporter associated domain - - - 0.0000000000000000000000000000000000000000000000000000000000001751 229.0
DYD1_k127_2239550_12 GAF domain K08968 - 1.8.4.14 0.000000000000000000000000000000000000000000000000000000001026 207.0
DYD1_k127_2239550_13 Putative zinc- or iron-chelating domain K06940 - - 0.0000000000000000000000000000000000000000000000000000187 191.0
DYD1_k127_2239550_14 Single strand-specific metallo-endoribonuclease involved in late-stage 70S ribosome quality control and in maturation of the 3' terminus of the 16S rRNA K07042 - - 0.000000000000000000000001264 109.0
DYD1_k127_2239550_15 NlpC/P60 family K21471 - - 0.00000000002938 72.0
DYD1_k127_2239550_2 Belongs to the deoxyhypusine synthase family K00809 - 2.5.1.46 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005068 514.0
DYD1_k127_2239550_3 Protein conserved in bacteria - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000943 402.0
DYD1_k127_2239550_4 COG0477 Permeases of the major facilitator superfamily - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003829 403.0
DYD1_k127_2239550_5 PhoH-like protein K06217 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006717 381.0
DYD1_k127_2239550_6 Belongs to the D-alanine--D-alanine ligase family K01921,K01955 - 6.3.2.4,6.3.5.5 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003869 386.0
DYD1_k127_2239550_7 Transport permease protein K01992 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004546 356.0
DYD1_k127_2239550_8 ABC-type multidrug transport system ATPase component K01990 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001266 357.0
DYD1_k127_2239550_9 Belongs to the pirin family K06911 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001122 326.0
DYD1_k127_22439_0 Prolyl oligopeptidase family - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004288 498.0
DYD1_k127_22439_1 Aldo/keto reductase family - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002825 384.0
DYD1_k127_22439_2 Predicted membrane protein (DUF2306) - - - 0.00000000000000000000000000000000000000000000000000000000000002463 222.0
DYD1_k127_22439_3 - - - - 0.0000000000000000000000000000000000000000002736 161.0
DYD1_k127_22439_4 DinB superfamily K07552 - - 0.00000000000000000000000000000000004057 140.0
DYD1_k127_2276406_0 Belongs to the sigma-70 factor family. ECF subfamily K03088 - - 0.0000000000000000000000000000000000000000004511 162.0
DYD1_k127_2276406_1 Required for chromosome condensation and partitioning K03529,K19171 GO:0005575,GO:0005618,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005886,GO:0016020,GO:0030312,GO:0044424,GO:0044444,GO:0044464,GO:0071944 - 0.000000000000000000003896 93.0
DYD1_k127_2278991_0 Protein tyrosine kinase K08282,K12132 - 2.7.11.1 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002137 488.0
DYD1_k127_2278991_1 Protein kinase domain K12132 - 2.7.11.1 0.0000000000000000000000000000000000000000000000000000000000000002162 239.0
DYD1_k127_2278991_2 periplasmic or secreted lipoprotein - - - 0.00000000000000000000000000000000000000004009 169.0
DYD1_k127_2278991_3 Protein of unknown function (DUF4242) - - - 0.0000000000000000000000000000000000007177 144.0
DYD1_k127_2278991_4 Tetratricopeptide repeat - - - 0.0000000000000000000000002175 122.0
DYD1_k127_2278991_5 Glycosyltransferase family 9 (heptosyltransferase) - - - 0.00000000000000000004539 94.0
DYD1_k127_2278991_6 ADP-glyceromanno-heptose 6-epimerase activity - - - 0.000000000000000000101 92.0
DYD1_k127_2278991_7 Tetratricopeptide repeat - - - 0.00000000003233 65.0
DYD1_k127_2285906_0 Part of the phosphoribosylformylglycinamidine synthase complex involved in the purines biosynthetic pathway. Catalyzes the ATP-dependent conversion of formylglycinamide ribonucleotide (FGAR) and glutamine to yield formylglycinamidine ribonucleotide (FGAM) and glutamate. The FGAM synthase complex is composed of three subunits. PurQ produces an ammonia molecule by converting glutamine to glutamate. PurL transfers the ammonia molecule to FGAR to form FGAM in an ATP-dependent manner. PurS interacts with PurQ and PurL and is thought to assist in the transfer of the ammonia molecule from PurQ to PurL K01952 - 6.3.5.3 1.629e-256 811.0
DYD1_k127_2285906_1 Subtilase family - - - 0.0000000000000000000000000000000000000000000000000000000000000000009853 236.0
DYD1_k127_2285906_2 peroxiredoxin activity - - - 0.000000000000000000000000000000000000000000002366 170.0
DYD1_k127_2285906_3 Amino-transferase class IV K02619 - 4.1.3.38 0.00000000000000000000000000000000001599 146.0
DYD1_k127_2285906_4 Belongs to the PEP-utilizing enzyme family K01006 - 2.7.9.1 0.0000000000000000000000000000001782 124.0
DYD1_k127_2285906_5 Belongs to the PEP-utilizing enzyme family K01006 - 2.7.9.1 0.00000000000000000000000000007505 119.0
DYD1_k127_2285906_6 cell redox homeostasis - - - 0.00000000000000000000001687 106.0
DYD1_k127_2298760_0 Catalyzes the reduction of nitrite to ammonia, consuming six electrons in the process - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001654 389.0
DYD1_k127_2298760_1 NHL repeat - - - 0.000000000000000000000000000000000000000000000000000000000000000003257 240.0
DYD1_k127_2298760_2 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster K00266 - 1.4.1.13,1.4.1.14 0.000000000000000000000000000000000000000000000000000000000002895 212.0
DYD1_k127_2298760_3 Plays a major role in protein secretion by helping the post-translocational extracellular folding of several secreted proteins K07533 - 5.2.1.8 0.000000000003355 78.0
DYD1_k127_2298760_4 Iron Permease K07243 - - 0.000000000009081 72.0
DYD1_k127_2314250_0 Pyridoxal-dependent decarboxylase conserved domain K01593 - 4.1.1.105,4.1.1.28 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001148 572.0
DYD1_k127_2314250_1 Receptor family ligand binding region K01999 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002681 423.0
DYD1_k127_2314250_2 Branched-chain amino acid transport system / permease component K01997 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001227 316.0
DYD1_k127_2314250_3 L-phenylalanine transmembrane transporter activity K01995,K01998 - - 0.00000000000000000000000000000002948 131.0
DYD1_k127_2314250_4 Peptidase, S9A B C family, catalytic domain protein - - - 0.00000000000000002669 91.0
DYD1_k127_2314696_0 PFAM Aminotransferase class-III K01845 - 5.4.3.8 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000459 451.0
DYD1_k127_2314696_1 actin binding - - - 0.00000000000000000000000000000000000000000007659 177.0
DYD1_k127_2320816_0 Cytochrome c - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000178 595.0
DYD1_k127_2320816_1 Catalyzes the conversion of D-ribulose 5-phosphate to formate and 3,4-dihydroxy-2-butanone 4-phosphate K14652 GO:0003674,GO:0003824,GO:0003933,GO:0003935,GO:0006766,GO:0006767,GO:0006771,GO:0006807,GO:0008150,GO:0008152,GO:0008686,GO:0009058,GO:0009110,GO:0009231,GO:0009987,GO:0016787,GO:0016810,GO:0016814,GO:0016829,GO:0016830,GO:0017144,GO:0018130,GO:0019238,GO:0034641,GO:0042364,GO:0042726,GO:0042727,GO:0044237,GO:0044249,GO:0044271,GO:0044281,GO:0044283,GO:0046483,GO:0071704,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576 3.5.4.25,4.1.99.12 0.0000000000000000000000000000000000000000000000000000000000000000004009 235.0
DYD1_k127_2320816_2 Pyridine nucleotide-disulphide oxidoreductase K00529 - 1.18.1.3 0.000000000000000000000000000000000000000000000000000000000000000001199 232.0
DYD1_k127_2339518_0 Catalyzes the folate-dependent formation of 5-methyl- uridine at position 54 (M-5-U54) in all tRNAs K04094 GO:0000166,GO:0001510,GO:0002097,GO:0002098,GO:0003674,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006139,GO:0006396,GO:0006399,GO:0006400,GO:0006725,GO:0006807,GO:0008033,GO:0008150,GO:0008152,GO:0009451,GO:0009987,GO:0010467,GO:0016070,GO:0030488,GO:0032259,GO:0034470,GO:0034641,GO:0034660,GO:0036094,GO:0043167,GO:0043168,GO:0043170,GO:0043412,GO:0043414,GO:0044237,GO:0044238,GO:0044260,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0048037,GO:0050660,GO:0050662,GO:0071704,GO:0090304,GO:0097159,GO:1901265,GO:1901360,GO:1901363 2.1.1.74 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003469 476.0
DYD1_k127_2339518_1 peptidyl-lysine modification to peptidyl-hypusine - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001008 323.0
DYD1_k127_2339518_2 Belongs to the 'phage' integrase family. XerC subfamily K03733,K04763 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000001452 280.0
DYD1_k127_2339518_3 - - - - 0.000000000000000000000000000000000000000000000005698 175.0
DYD1_k127_2339518_4 nucleotide-excision repair K03701 - - 0.00000000000000000000000000000000008451 134.0
DYD1_k127_2339518_5 PFAM von Willebrand factor type A - - - 0.00000000000000000000000000000001357 140.0
DYD1_k127_2339518_6 - - - - 0.0000000000000000000000006036 120.0
DYD1_k127_2339518_7 Prokaryotic dksA/traR C4-type zinc finger - - - 0.000000000003834 75.0
DYD1_k127_2339518_8 Participates in the translocation of lipoproteins from the inner membrane to the outer membrane. Only forms a complex with a lipoprotein if the residue after the N-terminal Cys is not an aspartate (The Asp acts as a targeting signal to indicate that the lipoprotein should stay in the inner membrane) - - - 0.0002002 54.0
DYD1_k127_2368377_0 Acts as a processive, ATP-dependent zinc metallopeptidase for both cytoplasmic and membrane proteins. Plays a role in the quality control of integral membrane proteins K03798 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008603 569.0
DYD1_k127_2368377_1 metallocarboxypeptidase activity - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002863 549.0
DYD1_k127_2368377_12 - - - - 0.0006879 45.0
DYD1_k127_2368377_2 Belongs to the heme-copper respiratory oxidase family K02274 - 1.9.3.1 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002725 358.0
DYD1_k127_2368377_3 Cytochrome c oxidase subunit III K02276 - 1.9.3.1 0.00000000000000000000000000000000000000000000000000000000000000004128 229.0
DYD1_k127_2368377_4 The pyruvate dehydrogenase complex catalyzes the overall conversion of pyruvate to acetyl-CoA and CO(2) K00627 - 2.3.1.12 0.000000000000000000000000000000000000000000000000000000000000004405 220.0
DYD1_k127_2368377_5 deoxyhypusine monooxygenase activity K00627,K02160,K07402 - 2.3.1.12 0.00000000000000000000000000000000000000000000000000000000009314 214.0
DYD1_k127_2368377_6 4Fe-4S binding domain K00395,K02572,K03616 - 1.8.99.2 0.00000000000000000000000000000000000000000000000001551 183.0
DYD1_k127_2368377_8 PFAM cytochrome c oxidase, subunit III K02276 - 1.9.3.1 0.00000000000000000000000000000000000000001063 161.0
DYD1_k127_2368377_9 SCO1/SenC K07152,K08976 - - 0.00000000000000000000000000000000000003511 147.0
DYD1_k127_2371905_0 Succinyl-CoA ligase like flavodoxin domain - - - 2.127e-214 681.0
DYD1_k127_2371905_1 VIT family - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000008509 270.0
DYD1_k127_2371905_2 DinB family - - - 0.000000000000000000000000000000000003505 139.0
DYD1_k127_238771_0 Transmembrane secretion effector - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000197 351.0
DYD1_k127_238771_1 HD domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000004172 261.0
DYD1_k127_238771_2 YHS domain K06966 - 3.2.2.10 0.00000000000000000000000000000000000003334 149.0
DYD1_k127_238771_3 Carbohydrate family 9 binding domain-like - - - 0.00000000000000000000000000002402 126.0
DYD1_k127_2390244_0 Spermine/spermidine synthase domain K00797 - 2.5.1.16 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009523 612.0
DYD1_k127_2390244_1 NAD(P)-binding Rossmann-like domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008216 557.0
DYD1_k127_2390244_2 FAD dependent oxidoreductase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005079 487.0
DYD1_k127_2390244_3 FAD dependent oxidoreductase K00303,K21061 - 1.5.3.1 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001354 459.0
DYD1_k127_2390244_4 Dihydrodipicolinate synthetase family K21062 - 3.5.4.22 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009672 417.0
DYD1_k127_2390244_5 Proline racemase K12658 - 5.1.1.8 0.00000000000000000000000000000000000000000000000000000000001521 209.0
DYD1_k127_2390244_6 Domain of unknown function (DUF4178) - - - 0.000000000000000000000000000000005361 135.0
DYD1_k127_2390244_7 2Fe-2S iron-sulfur cluster binding domain K00302 - 1.5.3.1 0.0000000000000000002914 90.0
DYD1_k127_2390244_8 Domain of Unknown Function (DUF350) - - - 0.00000000000000003362 84.0
DYD1_k127_2414315_0 von Willebrand factor type A domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000002008 308.0
DYD1_k127_2414315_1 Belongs to the FPP GGPP synthase family K00795,K13789 GO:0003674,GO:0003824,GO:0004161,GO:0004337,GO:0004659,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006629,GO:0006644,GO:0006720,GO:0006721,GO:0006793,GO:0006796,GO:0008150,GO:0008152,GO:0008299,GO:0008610,GO:0008654,GO:0009058,GO:0009987,GO:0016114,GO:0016740,GO:0016765,GO:0019637,GO:0033383,GO:0033384,GO:0044237,GO:0044238,GO:0044249,GO:0044255,GO:0044424,GO:0044444,GO:0044464,GO:0045337,GO:0045338,GO:0071704,GO:0090407,GO:1901576 2.5.1.1,2.5.1.10,2.5.1.29 0.000000000000000000000000000008599 122.0
DYD1_k127_2428120_0 Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain - - - 0.00000000000000000000000000000000000007422 153.0
DYD1_k127_2428120_1 Two component regulator propeller - - - 0.00000000000000000000000000002717 136.0
DYD1_k127_2461734_0 Histone deacetylase domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002635 319.0
DYD1_k127_2461734_1 Secretin and TonB N terminus short domain K02666 - - 0.000000000000000000000000000000000000000000000000000000000000007429 239.0
DYD1_k127_2461734_2 Peptidoglycan polymerase that catalyzes glycan chain elongation from lipid-linked precursors K03814 - 2.4.1.129 0.0000000000000000000000000000000000000000000000007932 185.0
DYD1_k127_2461734_3 Staphylococcal nuclease homologues - - - 0.000000000000000000002046 108.0
DYD1_k127_2461734_4 Roadblock/LC7 domain - - - 0.0000000000000001161 84.0
DYD1_k127_2461734_5 PFAM Pilus assembly protein PilO K02664 - - 0.000001647 58.0
DYD1_k127_2465657_0 cellulose binding - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001084 320.0
DYD1_k127_2465657_1 Protein tyrosine kinase - - - 0.00000000000000000000000000000000000000000000000000000000000000000003516 246.0
DYD1_k127_2465657_2 - - - - 0.0000000000000000000000000000001556 134.0
DYD1_k127_2477822_0 Associated with various cellular activities K03924 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008866 363.0
DYD1_k127_2477822_1 Domain of unknown function (DUF4350) - - - 0.00000000006584 75.0
DYD1_k127_2477822_2 Domain of unknown function (DUF4129) - - - 0.0005221 45.0
DYD1_k127_2479150_0 surface antigen variable number - - - 0.000000000000000000000000000000000000000000000000002002 207.0
DYD1_k127_2479150_1 peptidyl-prolyl cis-trans isomerase activity - - - 0.000008213 55.0
DYD1_k127_2480266_0 Belongs to the ClpA ClpB family K03696 - - 0.0 1088.0
DYD1_k127_2480266_1 TIGRFAM outer membrane protein assembly complex, YaeT protein K07277 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000615 415.0
DYD1_k127_2480266_2 Glycosyl-hydrolase 97 C-terminal, oligomerisation K01187 - 3.2.1.20 0.00000000000000000000000000000000000000000000000000000000000000004471 230.0
DYD1_k127_2480266_3 ABC-type transport system involved in lysophospholipase L1 biosynthesis, ATPase component K02003 - - 0.000000000000000000000000000000000000000000000000009474 187.0
DYD1_k127_2480266_4 lipoprotein releasing system, transmembrane protein, LolC E family K09808 - - 0.00000004399 63.0
DYD1_k127_2484858_0 Aconitase C-terminal domain K01703 - 4.2.1.33,4.2.1.35 1.65e-278 871.0
DYD1_k127_2484858_1 Belongs to the sigma-70 factor family. ECF subfamily K03088 - - 0.00000000000000000000000000007888 123.0
DYD1_k127_2484858_2 helix_turn_helix, arabinose operon control protein K07506 - - 0.000000000002248 69.0
DYD1_k127_2484858_3 HEAT repeats - - - 0.00000003925 66.0
DYD1_k127_2489554_0 cellulose binding - - - 0.0 1321.0
DYD1_k127_2489554_1 efflux transmembrane transporter activity K02004 - - 1.265e-211 683.0
DYD1_k127_2489554_2 Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family K02005 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004617 441.0
DYD1_k127_2489554_3 ABC transporter K02003 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002913 384.0
DYD1_k127_2489554_4 AAA domain, putative AbiEii toxin, Type IV TA system - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001875 352.0
DYD1_k127_2489554_5 FtsX-like permease family - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001295 348.0
DYD1_k127_2489554_6 protein kinase activity - - - 0.000000000000000000000000000000000000000000000000000000000000000000000004927 267.0
DYD1_k127_2506356_0 4Fe-4S dicluster domain K00184 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002601 528.0
DYD1_k127_2506356_1 Amidohydrolase family K01468 - 3.5.2.7 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000226 516.0
DYD1_k127_2506356_10 Phosphoribosyl transferase domain K00762 - 2.4.2.10 0.0000000000000000000000000000000000000000003307 167.0
DYD1_k127_2506356_11 palmitoyl-(protein) hydrolase activity K06999 - - 0.0000000000000000000000005788 113.0
DYD1_k127_2506356_12 Binds to DNA and alters its conformation. May be involved in regulation of gene expression, nucleoid organization and DNA protection K09747 - - 0.000000000000000000000001124 107.0
DYD1_k127_2506356_13 Universal stress protein - - - 0.00000000000000000000000465 108.0
DYD1_k127_2506356_14 FtsZ-dependent cytokinesis - - - 0.0000000000000000004741 96.0
DYD1_k127_2506356_15 NUDIX domain - - - 0.0000000000000007282 83.0
DYD1_k127_2506356_17 SnoaL-like domain - - - 0.00000007265 61.0
DYD1_k127_2506356_2 amino acid K20265 GO:0003333,GO:0003674,GO:0005215,GO:0005342,GO:0005575,GO:0005623,GO:0005886,GO:0005887,GO:0006810,GO:0006811,GO:0006820,GO:0006865,GO:0006873,GO:0006885,GO:0008150,GO:0008509,GO:0008514,GO:0009987,GO:0015075,GO:0015171,GO:0015179,GO:0015291,GO:0015297,GO:0015318,GO:0015711,GO:0015807,GO:0015849,GO:0016020,GO:0016021,GO:0019725,GO:0022804,GO:0022857,GO:0030003,GO:0030004,GO:0030641,GO:0031224,GO:0031226,GO:0034220,GO:0042592,GO:0044425,GO:0044459,GO:0044464,GO:0045852,GO:0046942,GO:0046943,GO:0048878,GO:0050801,GO:0051179,GO:0051234,GO:0051453,GO:0051454,GO:0055067,GO:0055080,GO:0055082,GO:0055085,GO:0065007,GO:0065008,GO:0071702,GO:0071705,GO:0071944,GO:0098656,GO:0098771,GO:1902475,GO:1903825,GO:1905039 - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003321 494.0
DYD1_k127_2506356_3 Catalyzes the attachment of glutamate to tRNA(Glu) in a two-step reaction glutamate is first activated by ATP to form Glu-AMP and then transferred to the acceptor end of tRNA(Glu) K01885 - 6.1.1.17 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003358 455.0
DYD1_k127_2506356_4 Cytochrome c7 and related cytochrome c - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000003748 284.0
DYD1_k127_2506356_5 GHMP kinases C terminal K07031 - 2.7.1.168 0.000000000000000000000000000000000000000000000000000000000000000000000000000000001726 284.0
DYD1_k127_2506356_6 May play a role in DNA repair. It seems to be involved in an RecBC-independent recombinational process of DNA repair. It may act with RecF and RecO K06187 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000003613 263.0
DYD1_k127_2506356_7 ROK family K00845 - 2.7.1.2 0.000000000000000000000000000000000000000000000000000000001119 213.0
DYD1_k127_2506356_8 Catalyzes the acyloin condensation reaction between C atoms 2 and 3 of pyruvate and glyceraldehyde 3-phosphate to yield 1-deoxy-D-xylulose-5-phosphate (DXP) K01662 - 2.2.1.7 0.0000000000000000000000000000000000000000000000000006041 187.0
DYD1_k127_2506356_9 Calcineurin-like phosphoesterase superfamily domain K07098 - - 0.0000000000000000000000000000000000000000000002494 177.0
DYD1_k127_2514177_0 Protein kinase domain K12132 - 2.7.11.1 6.33e-220 714.0
DYD1_k127_2514177_1 PLD-like domain K06131 - - 1.583e-218 687.0
DYD1_k127_2514177_10 DoxX - - - 0.0000000000000000000000000000000000000000000000000000000000004358 214.0
DYD1_k127_2514177_11 ECF sigma factor - - - 0.000000000000000000000000000000000000000000000000000001387 197.0
DYD1_k127_2514177_12 Thioredoxin-like - - - 0.0000000000000000000000004941 116.0
DYD1_k127_2514177_13 DNA Methylase K07445 - - 0.000000000000000004397 86.0
DYD1_k127_2514177_2 aminopeptidase K01262 - 3.4.11.9 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002424 621.0
DYD1_k127_2514177_3 Amidohydrolase family - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001048 577.0
DYD1_k127_2514177_4 Amidohydrolase family - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000978 524.0
DYD1_k127_2514177_6 Amidohydrolase family - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004362 308.0
DYD1_k127_2514177_7 Endonuclease/Exonuclease/phosphatase family - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000003373 260.0
DYD1_k127_2514177_8 Pfam:UPF0118 - - - 0.00000000000000000000000000000000000000000000000000000000000000000002363 245.0
DYD1_k127_2514177_9 CAAX protease self-immunity - - - 0.000000000000000000000000000000000000000000000000000000000000001633 226.0
DYD1_k127_2519100_0 enterobactin catabolic process - - - 9.521e-276 854.0
DYD1_k127_2519100_1 tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase activity - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004159 340.0
DYD1_k127_2519100_2 DNA ligase K01971,K10747 - 6.5.1.1,6.5.1.6,6.5.1.7 0.0000000000000000000000000000000000000000000003084 173.0
DYD1_k127_2519632_0 ATPase family associated with various cellular activities (AAA) - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007364 568.0
DYD1_k127_251987_0 PFAM Organic solvent tolerance protein K04744 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000002186 301.0
DYD1_k127_251987_1 Condensation of UDP-2,3-diacylglucosamine and 2,3- diacylglucosamine-1-phosphate to form lipid A disaccharide, a precursor of lipid A, a phosphorylated glycolipid that anchors the lipopolysaccharide to the outer membrane of the cell K00748 GO:0003674,GO:0005488,GO:0005543,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005975,GO:0006629,GO:0006643,GO:0006644,GO:0006664,GO:0006793,GO:0006796,GO:0008150,GO:0008152,GO:0008289,GO:0008610,GO:0008654,GO:0009058,GO:0009245,GO:0009247,GO:0009311,GO:0009312,GO:0009987,GO:0016051,GO:0019637,GO:0043167,GO:0043168,GO:0044237,GO:0044238,GO:0044249,GO:0044255,GO:0044424,GO:0044444,GO:0044464,GO:0046467,GO:0046493,GO:0071704,GO:0090407,GO:1901135,GO:1901137,GO:1901269,GO:1901271,GO:1901576,GO:1903509 2.4.1.182 0.00000000000000000000000000000000000000000000000000000000000000000000009594 249.0
DYD1_k127_251994_0 Catalyzes the attachment of threonine to tRNA(Thr) in a two-step reaction L-threonine is first activated by ATP to form Thr-AMP and then transferred to the acceptor end of tRNA(Thr) K01868 - 6.1.1.3 3.391e-222 707.0
DYD1_k127_251994_1 PFAM Metallophosphoesterase K09769 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000008435 291.0
DYD1_k127_251994_2 PFAM Tetratricopeptide repeat - - - 0.00000000000000000000000000000000000000000001385 173.0
DYD1_k127_251994_3 Binds directly to 23S ribosomal RNA and is necessary for the in vitro assembly process of the 50S ribosomal subunit. It is not involved in the protein synthesizing functions of that subunit K02887 - - 0.00000000000000000000000000000000000000002952 156.0
DYD1_k127_251994_4 IF-3 binds to the 30S ribosomal subunit and shifts the equilibrum between 70S ribosomes and their 50S and 30S subunits in favor of the free subunits, thus enhancing the availability of 30S subunits on which protein synthesis initiation begins K02520 - - 0.00000000000000000000000000000002042 128.0
DYD1_k127_251994_5 IF-3 binds to the 30S ribosomal subunit and shifts the equilibrum between 70S ribosomes and their 50S and 30S subunits in favor of the free subunits, thus enhancing the availability of 30S subunits on which protein synthesis initiation begins K02520 GO:0003674,GO:0003676,GO:0003723,GO:0003743,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006412,GO:0006413,GO:0006518,GO:0006807,GO:0006996,GO:0008135,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0016020,GO:0016043,GO:0019538,GO:0022411,GO:0032790,GO:0032984,GO:0032988,GO:0034641,GO:0034645,GO:0043021,GO:0043022,GO:0043043,GO:0043170,GO:0043603,GO:0043604,GO:0043933,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044424,GO:0044444,GO:0044464,GO:0044877,GO:0071704,GO:0071826,GO:0071840,GO:0097159,GO:1901363,GO:1901564,GO:1901566,GO:1901576,GO:1903008 - 0.00000000000000000000001094 102.0
DYD1_k127_251994_6 Ribosomal protein L35 K02916 - - 0.0000000000000000005213 87.0
DYD1_k127_251994_7 Activator of cell division through the inhibition of FtsZ GTPase activity, therefore promoting FtsZ assembly into bundles of protofilaments necessary for the formation of the division Z ring. It is recruited early at mid-cell but it is not essential for cell division K09888 - - 0.00000000001457 71.0
DYD1_k127_251994_8 - - - - 0.0004131 51.0
DYD1_k127_2521399_0 Uncharacterized ACR, YdiU/UPF0061 family - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003313 325.0
DYD1_k127_2521399_1 Specifically catalyzes the cleavage of the D-lactyl ether substituent of MurNAc 6-phosphate, producing GlcNAc 6- phosphate and D-lactate K07106 - 4.2.1.126 0.000000000000000000000000000000000000000000000000000000000000000000052 237.0
DYD1_k127_2521399_2 Aminotransferase class-V - - - 0.000000000000000000000000000000000000000000000001936 187.0
DYD1_k127_2521399_3 guanosine tetraphosphate metabolic process K07816 - 2.7.6.5 0.000000000000000000000000000000000000000000000004194 181.0
DYD1_k127_2521399_4 Transcriptional regulator, LysR K21703 - - 0.0000000000000000000000000000000000000009322 160.0
DYD1_k127_2521399_5 BadF/BadG/BcrA/BcrD ATPase family - - - 0.000000000000000000000000000000000004492 154.0
DYD1_k127_2521399_7 Higher Eukarytoes and Prokaryotes Nucleotide-binding domain - - - 0.00000002161 57.0
DYD1_k127_2521399_8 guanosine tetraphosphate metabolic process K07816 - 2.7.6.5 0.00000005025 55.0
DYD1_k127_2523667_0 Belongs to the dCTP deaminase family K01494 - 3.5.4.13 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001166 356.0
DYD1_k127_2523667_1 This enzyme is involved in nucleotide metabolism it produces dUMP, the immediate precursor of thymidine nucleotides and it decreases the intracellular concentration of dUTP so that uracil cannot be incorporated into DNA K01520 - 3.6.1.23 0.00000000000000000000000000000000000000007415 159.0
DYD1_k127_2523667_2 - - - - 0.0000000000000007388 87.0
DYD1_k127_2523667_3 Periplasmic or secreted lipoprotein - - - 0.000000001059 72.0
DYD1_k127_2525977_0 Polysulphide reductase, NrfD K00185 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001512 427.0
DYD1_k127_2525977_1 Protein of unknown function (DUF3341) - - - 0.0000000000000000000000000000000000000000000000000000000000000000004481 233.0
DYD1_k127_2525977_2 Cytochrome C oxidase, cbb3-type, subunit III - - - 0.000000000000000000000000000000000000000000000000000000005471 205.0
DYD1_k127_2525977_3 ABC-type Zn2 transport system, periplasmic component surface adhesin - - - 0.00000000002138 69.0
DYD1_k127_2530144_0 Protein kinase domain K12132 - 2.7.11.1 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001486 542.0
DYD1_k127_2530144_1 PFAM Glucose Sorbosone dehydrogenase - - - 0.000000000000000000000000000000000000000000000000000009919 196.0
DYD1_k127_2530144_2 ECF sigma factor - - - 0.00000000000000000000000000000000000000000001331 165.0
DYD1_k127_2540257_0 Catalyzes the base-exchange of a guanine (G) residue with the queuine precursor 7-aminomethyl-7-deazaguanine (PreQ1) at position 34 (anticodon wobble position) in tRNAs with GU(N) anticodons (tRNA-Asp, -Asn, -His and -Tyr). Catalysis occurs through a double-displacement mechanism. The nucleophile active site attacks the C1' of nucleotide 34 to detach the guanine base from the RNA, forming a covalent enzyme-RNA intermediate. The proton acceptor active site deprotonates the incoming PreQ1, allowing a nucleophilic attack on the C1' of the ribose to form the product. After dissociation, two additional enzymatic reactions on the tRNA convert PreQ1 to queuine (Q), resulting in the hypermodified nucleoside queuosine (7-(((4,5-cis-dihydroxy-2- cyclopenten-1-yl)amino)methyl)-7-deazaguanosine) K00773 - 2.4.2.29 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001591 442.0
DYD1_k127_2540257_1 Part of the Sec protein translocase complex. Interacts with the SecYEG preprotein conducting channel. SecDF uses the proton motive force (PMF) to complete protein translocation after the ATP-dependent function of SecA K03072 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001125 416.0
DYD1_k127_2540257_2 Preprotein translocase, YajC subunit K03210 - - 0.00000000000000002559 85.0
DYD1_k127_2540257_3 GTPase that plays an essential role in the late steps of ribosome biogenesis K03977 - - 0.0000000000001705 71.0
DYD1_k127_2540917_0 AAA ATPase domain K12132 - 2.7.11.1 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005355 531.0
DYD1_k127_2540917_1 TrkA-C domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005376 358.0
DYD1_k127_2540917_2 Monooxygenase fad-binding protein - - - 0.000000000000000000000000000000000000000000000000000000000000000000003941 243.0
DYD1_k127_2540917_3 Four repeated domains in the Fasciclin I family of proteins, present in many other contexts. - - - 0.00000000000000000000000001434 114.0
DYD1_k127_2540917_4 response regulator - - - 0.0000000000002766 84.0
DYD1_k127_2540917_5 Transcriptional regulator - - - 0.00003042 50.0
DYD1_k127_2566825_0 RmlD substrate binding domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001147 432.0
DYD1_k127_2566825_1 PFAM Glycosyl transferase family 2 K10012 - 2.4.2.53 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003531 374.0
DYD1_k127_2566825_2 Asparagine synthase K01953 - 6.3.5.4 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002339 336.0
DYD1_k127_2566825_3 Methionine biosynthesis protein MetW - - - 0.0000000000000000000000000000000000000000000000000000000000004121 222.0
DYD1_k127_2566825_4 Transcriptional regulatory protein, C terminal - - - 0.000000000000000000000000000000000000000000000000000000001198 214.0
DYD1_k127_2573325_0 4Fe-4S dicluster domain - - - 0.0000000000000000000000000000000000000009157 170.0
DYD1_k127_2573325_1 Glycosyl hydrolase family 3 N terminal domain K01207 - 3.2.1.52 0.0000000000000000002839 91.0
DYD1_k127_2573325_2 adenylyl cyclase class-3 4 guanylyl cyclase K01768 - 4.6.1.1 0.00003009 56.0
DYD1_k127_2577207_0 Tetratricopeptide repeat - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007574 361.0
DYD1_k127_2577207_1 Peptidase M14, carboxypeptidase A - - - 0.00000000000000000000000000000000002277 135.0
DYD1_k127_2582657_0 NeuB family K03856 - 2.5.1.54 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005538 463.0
DYD1_k127_2582657_1 Belongs to the class-I aminoacyl-tRNA synthetase family K01887 - 6.1.1.19 0.00000000000000000000000000000000000000000000000000000000000000000000000000000008265 275.0
DYD1_k127_2582657_2 - - - - 0.0000000000004547 74.0
DYD1_k127_2582657_3 Endonuclease/Exonuclease/phosphatase family - - - 0.00062 50.0
DYD1_k127_2585821_0 Critical role in recombination and DNA repair. Helps process Holliday junction intermediates to mature products by catalyzing branch migration. Has a DNA unwinding activity characteristic of a DNA helicase with a 3'- to 5'- polarity. Unwinds branched duplex DNA (Y-DNA) K03655 - 3.6.4.12 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006614 560.0
DYD1_k127_2585821_1 Required for the formation of a threonylcarbamoyl group on adenosine at position 37 (t(6)A37) in tRNAs that read codons beginning with adenine. Is involved in the transfer of the threonylcarbamoyl moiety of threonylcarbamoyl-AMP (TC-AMP) to the N6 group of A37, together with TsaE and TsaB. TsaD likely plays a direct catalytic role in this reaction K01409,K03070 GO:0000287,GO:0000408,GO:0002949,GO:0003674,GO:0003824,GO:0004175,GO:0004222,GO:0005488,GO:0005506,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006139,GO:0006396,GO:0006399,GO:0006400,GO:0006508,GO:0006725,GO:0006807,GO:0008033,GO:0008150,GO:0008152,GO:0008233,GO:0008237,GO:0009451,GO:0009987,GO:0010467,GO:0016070,GO:0016787,GO:0019538,GO:0032991,GO:0034470,GO:0034641,GO:0034660,GO:0042802,GO:0043167,GO:0043169,GO:0043170,GO:0043412,GO:0044237,GO:0044238,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0046872,GO:0046914,GO:0070011,GO:0070525,GO:0071704,GO:0090304,GO:0140030,GO:0140032,GO:0140096,GO:1901360,GO:1901564 2.3.1.234 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005797 365.0
DYD1_k127_2585821_3 Conserved hypothetical protein 95 - - - 0.00000000000000000000000000000000000000002339 159.0
DYD1_k127_2586496_0 asparaginase K01424,K01444,K13051 GO:0005575,GO:0005623,GO:0042597,GO:0044464 3.4.19.5,3.5.1.1,3.5.1.26 0.00000000000000000000000000000000000000000000000000000000000000002806 235.0
DYD1_k127_2586496_1 Pfam Hemerythrin HHE cation binding domain - - - 0.00000000000000000000000000000000000000000000000000000000000002541 223.0
DYD1_k127_2586496_2 Belongs to the acetylglutamate kinase family. ArgB subfamily K00930 GO:0003674,GO:0003824,GO:0003991,GO:0005488,GO:0006082,GO:0006520,GO:0006525,GO:0006526,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0008652,GO:0009058,GO:0009064,GO:0009084,GO:0009987,GO:0016053,GO:0016301,GO:0016310,GO:0016597,GO:0016740,GO:0016772,GO:0016774,GO:0019752,GO:0031406,GO:0034618,GO:0036094,GO:0043167,GO:0043168,GO:0043169,GO:0043177,GO:0043436,GO:0044237,GO:0044238,GO:0044249,GO:0044281,GO:0044283,GO:0046394,GO:0071704,GO:1901564,GO:1901566,GO:1901576,GO:1901605,GO:1901607 2.7.2.8 0.00000000000000000000000000000000004412 138.0
DYD1_k127_2586496_3 Helix-hairpin-helix DNA-binding, class 1 K02347 - - 0.000000000000000000000000007955 115.0
DYD1_k127_2586496_4 - - - - 0.00000000000000000000000004659 115.0
DYD1_k127_2604206_0 ATP dependent DNA ligase C terminal region K10747 GO:0000287,GO:0003674,GO:0003824,GO:0003909,GO:0003910,GO:0005488,GO:0005575,GO:0005618,GO:0005622,GO:0005623,GO:0005737,GO:0006139,GO:0006259,GO:0006260,GO:0006261,GO:0006266,GO:0006271,GO:0006273,GO:0006281,GO:0006725,GO:0006807,GO:0006950,GO:0006974,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0016070,GO:0016874,GO:0016886,GO:0022616,GO:0030312,GO:0033554,GO:0034641,GO:0034645,GO:0043167,GO:0043169,GO:0043170,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044424,GO:0044464,GO:0046483,GO:0046872,GO:0050896,GO:0051103,GO:0051716,GO:0071704,GO:0071944,GO:0090304,GO:0140097,GO:1901360,GO:1901576 6.5.1.1,6.5.1.6,6.5.1.7 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001956 572.0
DYD1_k127_2604206_1 Peptidase M56 - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007453 484.0
DYD1_k127_2604206_10 Part of the twin-arginine translocation (Tat) system that transports large folded proteins containing a characteristic twin-arginine motif in their signal peptide across membranes K03116,K03117 - - 0.0000000002333 67.0
DYD1_k127_2604206_2 Transglycosylase K05365 - 2.4.1.129,3.4.16.4 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003731 492.0
DYD1_k127_2604206_3 Specifically methylates position 2 of adenine 2503 in 23S rRNA and position 2 of adenine 37 in tRNAs K06941 GO:0000049,GO:0000154,GO:0001510,GO:0002935,GO:0003674,GO:0003676,GO:0003723,GO:0003824,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006139,GO:0006364,GO:0006396,GO:0006399,GO:0006400,GO:0006725,GO:0006807,GO:0008033,GO:0008150,GO:0008152,GO:0008168,GO:0008169,GO:0008173,GO:0008175,GO:0008649,GO:0008757,GO:0009451,GO:0009987,GO:0010467,GO:0016070,GO:0016072,GO:0016426,GO:0016433,GO:0016740,GO:0016741,GO:0022613,GO:0030488,GO:0031167,GO:0032259,GO:0034470,GO:0034641,GO:0034660,GO:0042254,GO:0043170,GO:0043412,GO:0043414,GO:0044085,GO:0044237,GO:0044238,GO:0044260,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0048037,GO:0051536,GO:0051539,GO:0051540,GO:0070040,GO:0070475,GO:0071704,GO:0071840,GO:0090304,GO:0097159,GO:0140098,GO:0140101,GO:0140102,GO:1901360,GO:1901363 2.1.1.192 0.0000000000000000000000000000000000000000000000000000000000000000000000000000003784 277.0
DYD1_k127_2604206_4 Belongs to the multicopper oxidase YfiH RL5 family K05810 GO:0003674,GO:0005488,GO:0005507,GO:0043167,GO:0043169,GO:0046872,GO:0046914 - 0.0000000000000000000000000000000000000000000000002768 188.0
DYD1_k127_2604206_5 PFAM Patatin-like phospholipase K07001 - - 0.00000000000000000000000000000000000000000000007185 179.0
DYD1_k127_2604206_6 thiolester hydrolase activity K06889 - - 0.00000000000000000000000000000000000000000002175 172.0
DYD1_k127_2604206_7 Part of the twin-arginine translocation (Tat) system that transports large folded proteins containing a characteristic twin-arginine motif in their signal peptide across membranes K03118 - - 0.000000000000000000000000000000000000009651 158.0
DYD1_k127_2604206_8 Transfers the 4'-phosphopantetheine moiety from coenzyme A to a Ser of acyl-carrier-protein K00997 - 2.7.8.7 0.0000000000000000000000002989 109.0
DYD1_k127_2604206_9 Cytochrome c biogenesis protein transmembrane region K04084 - 1.8.1.8 0.0000000000009492 74.0
DYD1_k127_2606776_0 Beta-ketoacyl synthase, N-terminal domain K16129 - - 3.932e-245 819.0
DYD1_k127_2606776_1 geranylgeranyl reductase activity K16431,K21256 - - 9.635e-244 765.0
DYD1_k127_2606776_2 AMP-binding enzyme - - - 2.507e-205 663.0
DYD1_k127_2606776_3 Zinc-binding dehydrogenase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006624 428.0
DYD1_k127_2606776_4 Selenocysteine lyase K04127,K11325 - 5.1.1.17 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001133 425.0
DYD1_k127_2606776_5 Rieske [2Fe-2S] domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001152 326.0
DYD1_k127_2606776_6 PFAM Methyltransferase domain - - - 0.00000000000000000000000000000000000000000003 174.0
DYD1_k127_2607069_0 PFAM Phosphopantetheine attachment site - - - 0.0 1229.0
DYD1_k127_2607069_1 PKS_DH K12436,K16396,K16397 - - 0.0 1063.0
DYD1_k127_2607069_2 acyl transferase domain K16128 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004311 551.0
DYD1_k127_2613199_0 cellulose binding - - - 0.0 1029.0
DYD1_k127_2613199_1 Type I phosphodiesterase / nucleotide pyrophosphatase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007154 426.0
DYD1_k127_2613199_2 N-Acyl-D-aspartate D-glutamate deacylase K06015 - 3.5.1.81 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002663 419.0
DYD1_k127_2613199_3 Pyridoxamine 5'-phosphate oxidase K07005 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006563 309.0
DYD1_k127_2613199_4 Domain of unknown function DUF87 K06915 - - 0.0000000000000000000002113 111.0
DYD1_k127_2613199_5 - - - - 0.000000000004853 76.0
DYD1_k127_2613199_6 peptidyl-tyrosine sulfation - - - 0.00000002714 61.0
DYD1_k127_2628875_0 Beta-lactamase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001376 404.0
DYD1_k127_2628875_1 Catalyzes the synthesis of the hydroxymethylpyrimidine phosphate (HMP-P) moiety of thiamine from aminoimidazole ribotide (AIR) in a radical S-adenosyl-L-methionine (SAM)-dependent reaction K03147 - 4.1.99.17 0.0000000000000000000000000000000000000000000000000000000000000000000001884 239.0
DYD1_k127_2628875_2 PD-(D/E)XK nuclease superfamily - - - 0.00000000000000000000000000000000001869 139.0
DYD1_k127_2630224_0 Belongs to the class-II pyridoxal-phosphate-dependent aminotransferase family. Histidinol-phosphate aminotransferase subfamily K00817 - 2.6.1.9 0.0000000000000000000000000000000000000000000000000000000000000000000000000002175 268.0
DYD1_k127_2630224_1 PFAM Imidazoleglycerol-phosphate dehydratase K01693 - 4.2.1.19 0.000000000000000000000000000000000000000000000000000000000000000005038 230.0
DYD1_k127_2630224_2 IGPS catalyzes the conversion of PRFAR and glutamine to IGP, AICAR and glutamate. The HisH subunit provides the glutamine amidotransferase activity that produces the ammonia necessary to HisF for the synthesis of IGP and AICAR K02501 - - 0.00000000000000000000000000000000000000000000000000000000001332 212.0
DYD1_k127_2630224_3 IGPS catalyzes the conversion of PRFAR and glutamine to IGP, AICAR and glutamate. The HisF subunit catalyzes the cyclization activity that produces IGP and AICAR from PRFAR using the ammonia provided by the HisH subunit K02500 - - 0.0000000000000000000000000000002503 123.0
DYD1_k127_2630365_0 Glucose / Sorbosone dehydrogenase K21430 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001496 362.0
DYD1_k127_2630365_1 OsmC-like protein K07397 - - 0.00000000000000000000000000000000000000000001216 166.0
DYD1_k127_2630365_2 transglycosylase K08309 - - 0.0000000000000000000000000008279 128.0
DYD1_k127_2630365_3 IMP dehydrogenase activity - - - 0.00000000000000000000000009426 112.0
DYD1_k127_2630365_4 Evidence 3 Function proposed based on presence of conserved amino acid motif, structural feature or limited homology - - - 0.000000000000000000001118 98.0
DYD1_k127_2630365_5 - - - - 0.000000000000000151 90.0
DYD1_k127_2630365_6 COG0500 SAM-dependent methyltransferases K03183 - 2.1.1.163,2.1.1.201 0.0000000000004861 77.0
DYD1_k127_2630365_7 Elongator protein 3, MiaB family, Radical SAM - - - 0.0000001124 53.0
DYD1_k127_2656407_0 Catalyzes the conversion of GDP-D-mannose to GDP-4- dehydro-6-deoxy-D-mannose K01711 - 4.2.1.47 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007545 503.0
DYD1_k127_2656407_1 Putative zinc binding domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006605 463.0
DYD1_k127_2656407_10 Glycosyl transferases group 1 - - - 0.0000000000000000000000000000000000000000000000005138 189.0
DYD1_k127_2656407_11 glycosyl transferase - - - 0.0000004683 62.0
DYD1_k127_2656407_2 Catalyzes the two-step NADP-dependent conversion of GDP- 4-dehydro-6-deoxy-D-mannose to GDP-fucose, involving an epimerase and a reductase reaction K02377 - 1.1.1.271 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002382 441.0
DYD1_k127_2656407_3 cephalosporin hydroxylase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004116 353.0
DYD1_k127_2656407_4 ABC-type polysaccharide polyol phosphate transport system ATPase component K09691 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001005 336.0
DYD1_k127_2656407_5 COG1682 ABC-type polysaccharide polyol phosphate export systems, permease component K09690 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006886 324.0
DYD1_k127_2656407_6 PFAM glycosyl transferase group 1 K12993 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002064 330.0
DYD1_k127_2656407_7 tRNA (guanine(37)-N(1))-methyltransferase activity - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000001261 270.0
DYD1_k127_2656407_8 Catalyzes the epimerization of the C3' and C5'positions of dTDP-6-deoxy-D-xylo-4-hexulose, forming dTDP-6-deoxy-L-lyxo-4- hexulose K00067,K01790 - 1.1.1.133,5.1.3.13 0.000000000000000000000000000000000000000000000000000000000000000000002111 239.0
DYD1_k127_2656407_9 NAD dependent epimerase/dehydratase family - - - 0.0000000000000000000000000000000000000000000000000000000000000001437 233.0
DYD1_k127_266179_0 Aconitase family (aconitate hydratase) K01681 - 4.2.1.3 0.0 1298.0
DYD1_k127_266179_1 Belongs to the aldehyde dehydrogenase family K00128,K00146 - 1.2.1.3,1.2.1.39 1.834e-203 643.0
DYD1_k127_266179_2 Allows the formation of correctly charged Asn-tRNA(Asn) or Gln-tRNA(Gln) through the transamidation of misacylated Asp- tRNA(Asn) or Glu-tRNA(Gln) in organisms which lack either or both of asparaginyl-tRNA or glutaminyl-tRNA synthetases. The reaction takes place in the presence of glutamine and ATP through an activated phospho-Asp-tRNA(Asn) or phospho-Glu-tRNA(Gln) K02434 - 6.3.5.6,6.3.5.7 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000342 505.0
DYD1_k127_266179_3 KR domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000022 248.0
DYD1_k127_266179_4 rejects L-amino acids rather than detecting D-amino acids in the active site. By recycling D-aminoacyl-tRNA to D-amino acids and free tRNA molecules, this enzyme counteracts the toxicity associated with the formation of D-aminoacyl-tRNA entities in vivo and helps enforce protein L-homochirality K07560 GO:0002161,GO:0003674,GO:0003824,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006139,GO:0006399,GO:0006450,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0009987,GO:0016070,GO:0016787,GO:0016788,GO:0034641,GO:0034660,GO:0043170,GO:0044237,GO:0044238,GO:0044424,GO:0044464,GO:0046483,GO:0051499,GO:0051500,GO:0052689,GO:0065007,GO:0065008,GO:0071704,GO:0090304,GO:0106074,GO:0140098,GO:0140101,GO:1901360 - 0.0000000000000000000000000000000000000000000000000005773 187.0
DYD1_k127_266179_5 abc transporter K02013 - 3.6.3.34 0.00000000000000000000000000000001515 131.0
DYD1_k127_266179_6 TPR repeat - - - 0.0000000000000000000000001452 118.0
DYD1_k127_266179_8 - - - - 0.000000001549 64.0
DYD1_k127_266179_9 - - - - 0.0001408 50.0
DYD1_k127_2684367_0 Alpha/beta hydrolase family - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004015 490.0
DYD1_k127_2684367_1 Belongs to the aspartate glutamate racemases family K01779 - 5.1.1.13 0.000000000000000000000000000000000000000000000000000000001783 207.0
DYD1_k127_2705289_0 One of the primary rRNA binding proteins. Required for association of the 30S and 50S subunits to form the 70S ribosome, for tRNA binding and peptide bond formation. It has been suggested to have peptidyltransferase activity K02886 GO:0002181,GO:0003674,GO:0003676,GO:0003723,GO:0003735,GO:0005198,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0006412,GO:0006518,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0015934,GO:0019538,GO:0022625,GO:0022626,GO:0032991,GO:0034641,GO:0034645,GO:0043043,GO:0043170,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:0071704,GO:0097159,GO:1901363,GO:1901564,GO:1901566,GO:1901576,GO:1990904 - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006406 393.0
DYD1_k127_2705289_1 Binds the lower part of the 30S subunit head. Binds mRNA in the 70S ribosome, positioning it for translation K02982 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001358 304.0
DYD1_k127_2705289_10 One of two assembly initiator proteins, it binds directly to the 5'-end of the 23S rRNA, where it nucleates assembly of the 50S subunit K02895 GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0006412,GO:0006518,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0015934,GO:0019538,GO:0022625,GO:0022626,GO:0032991,GO:0034641,GO:0034645,GO:0043043,GO:0043170,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:0071704,GO:1901564,GO:1901566,GO:1901576,GO:1990904 - 0.00000000000000000000000000002146 121.0
DYD1_k127_2705289_11 The globular domain of the protein is located near the polypeptide exit tunnel on the outside of the subunit, while an extended beta-hairpin is found that lines the wall of the exit tunnel in the center of the 70S ribosome K02890 - - 0.00000000000000000000000002117 114.0
DYD1_k127_2705289_12 Binds 16S rRNA, required for the assembly of 30S particles and may also be responsible for determining the conformation of the 16S rRNA at the A site K02954 GO:0003674,GO:0003735,GO:0005198,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005840,GO:0006412,GO:0006518,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0015935,GO:0019538,GO:0032991,GO:0034641,GO:0034645,GO:0043043,GO:0043170,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044446,GO:0044464,GO:0071704,GO:1901564,GO:1901566,GO:1901576,GO:1990904 - 0.0000000000000000000000006103 106.0
DYD1_k127_2705289_13 One of the early assembly proteins it binds 23S rRNA. One of the proteins that surrounds the polypeptide exit tunnel on the outside of the ribosome. Forms the main docking site for trigger factor binding to the ribosome K02892 - - 0.0000000000000000000009342 97.0
DYD1_k127_2705289_14 One of the primary rRNA binding proteins, it binds specifically to the 5'-end of 16S ribosomal RNA K02961 - - 0.00000000000000000003109 95.0
DYD1_k127_2705289_15 One of the primary rRNA binding proteins, it binds directly to 16S rRNA central domain where it helps coordinate assembly of the platform of the 30S subunit K02994 GO:0003674,GO:0003735,GO:0005198,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0015935,GO:0022626,GO:0022627,GO:0032991,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:1990904 - 0.00000000000001214 74.0
DYD1_k127_2705289_16 Belongs to the universal ribosomal protein uL29 family K02904 - - 0.0000002437 56.0
DYD1_k127_2705289_2 This is 1 of the proteins that binds and probably mediates the attachment of the 5S RNA into the large ribosomal subunit, where it forms part of the central protuberance. In the 70S ribosome it contacts protein S13 of the 30S subunit (bridge B1b), connecting the 2 subunits K02931 GO:0000027,GO:0003674,GO:0003676,GO:0003723,GO:0003735,GO:0005198,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0006412,GO:0006518,GO:0006807,GO:0006996,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0015934,GO:0016043,GO:0019538,GO:0022607,GO:0022613,GO:0022618,GO:0022625,GO:0022626,GO:0032991,GO:0034622,GO:0034641,GO:0034645,GO:0042254,GO:0042255,GO:0042273,GO:0043043,GO:0043170,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043603,GO:0043604,GO:0043933,GO:0044085,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:0065003,GO:0070925,GO:0071704,GO:0071826,GO:0071840,GO:0097159,GO:1901363,GO:1901564,GO:1901566,GO:1901576,GO:1990904 - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000217 280.0
DYD1_k127_2705289_3 One of the primary rRNA binding proteins, it binds directly near the 3'-end of the 23S rRNA, where it nucleates assembly of the 50S subunit K02906 - - 0.000000000000000000000000000000000000000000000000000000000000000000001677 242.0
DYD1_k127_2705289_4 Binds 23S rRNA and is also seen to make contacts with the A and possibly P site tRNAs K02878 - - 0.000000000000000000000000000000000000000000000000000000000000000001761 228.0
DYD1_k127_2705289_5 One of the primary rRNA binding proteins, this protein initially binds near the 5'-end of the 23S rRNA. It is important during the early stages of 50S assembly. It makes multiple contacts with different domains of the 23S rRNA in the assembled 50S subunit and ribosome K02926 - - 0.00000000000000000000000000000000000000000000000000000000004719 213.0
DYD1_k127_2705289_6 Involved in the binding of tRNA to the ribosomes K02946 - - 0.0000000000000000000000000000000000000000000000000000536 187.0
DYD1_k127_2705289_7 Binds to 23S rRNA. Forms part of two intersubunit bridges in the 70S ribosome K02874 - - 0.000000000000000000000000000000000000000000000000002305 184.0
DYD1_k127_2705289_8 This protein promotes the GTP-dependent binding of aminoacyl-tRNA to the A-site of ribosomes during protein biosynthesis K02358 - - 0.00000000000000000000000000000000000000000000000004097 178.0
DYD1_k127_2705289_9 Protein S19 forms a complex with S13 that binds strongly to the 16S ribosomal RNA K02965 GO:0000028,GO:0003674,GO:0003735,GO:0005198,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0006996,GO:0008150,GO:0009987,GO:0015935,GO:0016043,GO:0022607,GO:0022613,GO:0022618,GO:0022626,GO:0022627,GO:0032991,GO:0034622,GO:0042254,GO:0042255,GO:0042274,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043933,GO:0044085,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:0065003,GO:0070925,GO:0071826,GO:0071840,GO:1990904 - 0.0000000000000000000000000000000004998 135.0
DYD1_k127_2709750_0 Carboxypeptidase regulatory-like domain - - - 1.356e-204 674.0
DYD1_k127_2709750_1 dihydrolipoamide dehydrogenase K00382 - 1.8.1.4 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006655 539.0
DYD1_k127_2709750_10 RDD family - - - 0.000000000000000000000000000000000000000001435 166.0
DYD1_k127_2709750_11 Catalyzes the ATP-dependent transfer of a sulfur to tRNA to produce 4-thiouridine in position 8 of tRNAs, which functions as a near-UV photosensor. Also catalyzes the transfer of sulfur to the sulfur carrier protein ThiS, forming ThiS-thiocarboxylate. This is a step in the synthesis of thiazole, in the thiamine biosynthesis pathway. The sulfur is donated as persulfide by IscS - - - 0.0000000000000000000000000000000000000001296 154.0
DYD1_k127_2709750_2 Belongs to the thiolase family K00626 - 2.3.1.9 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000219 473.0
DYD1_k127_2709750_3 Catalyzes the attachment of tyrosine to tRNA(Tyr) in a two-step reaction tyrosine is first activated by ATP to form Tyr- AMP and then transferred to the acceptor end of tRNA(Tyr) K01866 - 6.1.1.1 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002267 473.0
DYD1_k127_2709750_4 Transketolase, pyrimidine binding domain K00167 - 1.2.4.4 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002301 440.0
DYD1_k127_2709750_5 e3 binding domain K00658 - 2.3.1.61 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001262 436.0
DYD1_k127_2709750_6 The pyruvate dehydrogenase complex catalyzes the overall conversion of pyruvate to acetyl-CoA and CO(2) K00161,K11381,K21416 - 1.2.4.1,1.2.4.4 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005687 364.0
DYD1_k127_2709750_7 Catalyzes the reduction of 1-pyrroline-5-carboxylate (PCA) to L-proline K00286 - 1.5.1.2 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001555 336.0
DYD1_k127_2709750_8 PFAM AIR synthase related protein K01933 - 6.3.3.1 0.0000000000000000000000000000000000000000000000000000000000000000000000000000003315 269.0
DYD1_k127_2709750_9 Catalyzes the transfer of a formyl group from 10- formyltetrahydrofolate to 5-phospho-ribosyl-glycinamide (GAR), producing 5-phospho-ribosyl-N-formylglycinamide (FGAR) and tetrahydrofolate K11175 - 2.1.2.2 0.000000000000000000000000000000000000000000000000000000000000000000000002432 249.0
DYD1_k127_2711486_0 Transketolase, pyrimidine binding domain K11381 - 1.2.4.4 2.559e-301 940.0
DYD1_k127_2711486_1 5'-nucleotidase, C-terminal domain K01119 - 3.1.3.6,3.1.4.16 5.514e-207 657.0
DYD1_k127_2711486_2 Acyl-CoA dehydrogenase, C-terminal domain K00248,K09478 - 1.3.8.1,1.3.99.12 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006556 556.0
DYD1_k127_2711486_3 Inner membrane component of T3SS, cytoplasmic domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002388 365.0
DYD1_k127_2711486_4 lipoprotein localization to outer membrane K02004 - - 0.000000000000000000000000000000000000000000000005847 186.0
DYD1_k127_2711486_5 FR47-like protein - - - 0.000000000000000000000000000000001807 134.0
DYD1_k127_2711486_6 chaperone-mediated protein folding - - - 0.0000000000000000001372 94.0
DYD1_k127_2711486_7 methyltransferase - - - 0.000000000000000004978 98.0
DYD1_k127_2711486_8 Lysylphosphatidylglycerol synthase TM region - - - 0.000000000000004155 87.0
DYD1_k127_2711486_9 Dolichyl-phosphate-mannose-protein mannosyltransferase - - - 0.00005197 56.0
DYD1_k127_2715819_0 amino acids such as valine, to avoid such errors it has two additional distinct tRNA(Ile)-dependent editing activities. One activity is designated as 'pretransfer' editing and involves the hydrolysis of activated Val-AMP. The other activity is designated 'posttransfer' editing and involves deacylation of mischarged Val-tRNA(Ile) K01870 - 6.1.1.5 5.882e-302 954.0
DYD1_k127_2715819_1 WD40-like Beta Propeller Repeat - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002477 482.0
DYD1_k127_2715819_2 aminopeptidase activity - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003265 416.0
DYD1_k127_2715819_3 two component, sigma54 specific, transcriptional regulator, Fis family K07713 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005965 339.0
DYD1_k127_2715819_4 Transfers the N-acyl diglyceride group on what will become the N-terminal cysteine of membrane lipoproteins K13292 - - 0.0000000000000000000000000000000000000000000000000000000000000000001248 239.0
DYD1_k127_2715819_5 This protein specifically catalyzes the removal of signal peptides from prolipoproteins K03101 - 3.4.23.36 0.00000000000000000000000000000003977 134.0
DYD1_k127_2715819_6 general stress protein - - - 0.0000004479 58.0
DYD1_k127_2738254_0 The central subunit of the protein translocation channel SecYEG. Consists of two halves formed by TMs 1-5 and 6-10. These two domains form a lateral gate at the front which open onto the bilayer between TMs 2 and 7, and are clamped together by SecE at the back. The channel is closed by both a pore ring composed of hydrophobic SecY resides and a short helix (helix 2A) on the extracellular side of the membrane which forms a plug. The plug probably moves laterally to allow the channel to open. The ring and the pore may move independently K03076 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005101 488.0
DYD1_k127_2738254_1 Located at the back of the 30S subunit body where it stabilizes the conformation of the head with respect to the body K02988 - - 0.000000000000000000000000000000000000000000000000000000000000478 214.0
DYD1_k127_2738254_2 This protein binds to the 23S rRNA, and is important in its secondary structure. It is located near the subunit interface in the base of the L7 L12 stalk, and near the tRNA binding site of the peptidyltransferase center K02933 - - 0.0000000000000000000000000000000000000000000000000000021 196.0
DYD1_k127_2738254_3 One of the primary rRNA binding proteins, it binds directly to 16S rRNA central domain where it helps coordinate assembly of the platform of the 30S subunit K02994 - - 0.0000000000000000000000000000000000000000000000002291 178.0
DYD1_k127_2738254_4 Binds to the 23S rRNA K02876 - - 0.00000000000000000000000000000000000000000002713 165.0
DYD1_k127_2738254_5 This is one of the proteins that binds and probably mediates the attachment of the 5S RNA into the large ribosomal subunit, where it forms part of the central protuberance K02881 - - 0.00000000000000000000000000000000000000335 150.0
DYD1_k127_2738254_6 Ribosomal protein L30 K02907 - - 0.00000000000000001755 83.0
DYD1_k127_2739624_0 HD domain - - - 0.00000000000000000000000000000000000000000000002298 188.0
DYD1_k127_2739624_1 sigma factor antagonist activity K04757 - 2.7.11.1 0.00000000000009381 78.0
DYD1_k127_2739624_2 antisigma factor binding - - - 0.00000001104 61.0
DYD1_k127_2740477_0 transport - - - 0.0 1394.0
DYD1_k127_2740477_1 PFAM D-aminoacylase, C-terminal region K06015 - 3.5.1.81 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007409 559.0
DYD1_k127_2740477_2 TonB-dependent Receptor Plug - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003868 584.0
DYD1_k127_2740477_3 PFAM TonB-dependent Receptor Plug - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000008784 313.0
DYD1_k127_2740477_4 Belongs to the metallo-dependent hydrolases superfamily. NagA family K01443 - 3.5.1.25 0.0000000000000000000000000000000000000000000000000000000000000000000000000001233 274.0
DYD1_k127_2740477_5 Glycosyl hydrolase-like 10 - - - 0.00000000000000000000000000000000000000001348 170.0
DYD1_k127_2740477_6 Tetratricopeptide repeat - - - 0.000000000000000000000006518 115.0
DYD1_k127_2740477_7 Carboxypeptidase regulatory-like domain - - - 0.0001479 46.0
DYD1_k127_2743404_0 Catalyzes the first step in hexosamine metabolism, converting fructose-6P into glucosamine-6P using glutamine as a nitrogen source K00820 - 2.6.1.16 5.922e-282 877.0
DYD1_k127_2743404_1 Catalyzes the last two sequential reactions in the de novo biosynthetic pathway for UDP-N-acetylglucosamine (UDP- GlcNAc). The C-terminal domain catalyzes the transfer of acetyl group from acetyl coenzyme A to glucosamine-1-phosphate (GlcN-1-P) to produce N-acetylglucosamine-1-phosphate (GlcNAc-1-P), which is converted into UDP-GlcNAc by the transfer of uridine 5- monophosphate (from uridine 5-triphosphate), a reaction catalyzed by the N-terminal domain K04042 - 2.3.1.157,2.7.7.23 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004512 366.0
DYD1_k127_2743404_2 6-O-methylguanine DNA methyltransferase, DNA binding domain K10778 - 2.1.1.63 0.00000000000000000000000000000000000000000000000000000000000001131 220.0
DYD1_k127_2774479_0 Mur ligase middle domain K02558 - 6.3.2.45 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002357 483.0
DYD1_k127_2774479_1 COGs COG5001 signal transduction protein containing a membrane domain an EAL and a GGDEF domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008307 495.0
DYD1_k127_2774479_10 PFAM YHS domain K01533,K17686 - 3.6.3.4,3.6.3.54 0.0000000008171 62.0
DYD1_k127_2774479_11 PFAM von Willebrand factor type A - - - 0.0000002923 62.0
DYD1_k127_2774479_2 PFAM Phosphate acetyl butaryl transferase K00625 GO:0006082,GO:0006083,GO:0008150,GO:0008152,GO:0009058,GO:0009987,GO:0016053,GO:0016999,GO:0017000,GO:0017144,GO:0019413,GO:0019752,GO:0032787,GO:0043436,GO:0044237,GO:0044249,GO:0044281,GO:0044283,GO:0046394,GO:0071704,GO:0072330,GO:1901576 2.3.1.8 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001175 349.0
DYD1_k127_2774479_3 HD domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004849 316.0
DYD1_k127_2774479_4 Nad-dependent epimerase dehydratase K01784 - 5.1.3.2 0.0000000000000000000000000000000000000000000000000000000000000000000000000000679 269.0
DYD1_k127_2774479_5 Branched-chain amino acid transport system / permease component K10440,K10553 - - 0.00000000000000000000000000000000000002046 144.0
DYD1_k127_2774479_6 PFAM Glycosyl transferases group 1 - - - 0.00000000000000000000000000000404 128.0
DYD1_k127_2774479_7 Protein of unknown function (DUF1232) - - - 0.000000000000000000000001215 113.0
DYD1_k127_2774479_8 Psort location Extracellular, score - - - 0.000000000000000000007047 106.0
DYD1_k127_2774479_9 Sensory domain in DIguanylate Cyclases and Two-component system - - - 0.000000000000000003819 91.0
DYD1_k127_2778834_0 ATPase related to the helicase subunit of the Holliday junction resolvase K07478 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007965 585.0
DYD1_k127_2778834_1 ATPase that binds to both the 70S ribosome and the 50S ribosomal subunit in a nucleotide-independent manner K06942 GO:0003674,GO:0003824,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0016462,GO:0016787,GO:0016817,GO:0016818,GO:0016887,GO:0017111,GO:0044424,GO:0044464 - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002514 442.0
DYD1_k127_2778834_2 HNH endonuclease - - - 0.00000000000000000000000000000000000000000000000000000000000000000004318 235.0
DYD1_k127_2778834_3 competence protein - - - 0.00000000000000000000000000000001975 136.0
DYD1_k127_2778834_4 Specifically methylates the pseudouridine at position 1915 (m3Psi1915) in 23S rRNA K00783 - 2.1.1.177 0.0000000000000000000000000001493 120.0
DYD1_k127_2778834_5 Prokaryotic dksA/traR C4-type zinc finger K06204 - - 0.00000000000000000000000982 104.0
DYD1_k127_2778834_6 chaperone-mediated protein folding - - - 0.0000000000000000001161 100.0
DYD1_k127_2778834_7 Part of the twin-arginine translocation (Tat) system that transports large folded proteins containing a characteristic twin-arginine motif in their signal peptide across membranes. TatA could form the protein-conducting channel of the Tat system K03116 GO:0008150,GO:0040007 - 0.000003205 51.0
DYD1_k127_2778834_8 methyltransferase - - - 0.000128 53.0
DYD1_k127_2828844_0 Cation transporter/ATPase, N-terminus K01537 - 3.6.3.8 5.499e-259 808.0
DYD1_k127_2828844_1 Uncharacterized protein conserved in bacteria (DUF2236) - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007465 302.0
DYD1_k127_2835822_0 Amidohydrolase family K12960,K20810 - 3.5.4.28,3.5.4.31,3.5.4.40 0.00000000000000000000000000000000000000000001043 171.0
DYD1_k127_2835822_1 PIN domain - - - 0.0000000000000000000000003329 111.0
DYD1_k127_2835822_2 Transglycosylase SLT domain K08309 - - 0.0000000000000000000001332 108.0
DYD1_k127_2835822_3 Tetratricopeptide repeat - - - 0.0000000000000002739 92.0
DYD1_k127_2835822_4 Psort location Cytoplasmic, score 8.87 - - - 0.0002028 52.0
DYD1_k127_2845683_0 Attaches a formyl group to the free amino group of methionyl-tRNA(fMet). The formyl group appears to play a dual role in the initiator identity of N-formylmethionyl-tRNA by promoting its recognition by IF2 and preventing the misappropriation of this tRNA by the elongation apparatus K00604 - 2.1.2.9 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001361 319.0
DYD1_k127_2845683_1 Specifically methylates the cytosine at position 967 (m5C967) of 16S rRNA K03500 - 2.1.1.176 0.000000000000000000000000000000000000000000000000000000000000000000000000001083 270.0
DYD1_k127_2845683_2 Belongs to the ribulose-phosphate 3-epimerase family K01783 - 5.1.3.1 0.0000000000000000000000000000000000000000000000000000000000000000000000002098 253.0
DYD1_k127_2845683_3 Delta-1-pyrroline-5-carboxylate dehydrogenase K00294 - 1.2.1.88 0.000000000000000000000000000000000008791 137.0
DYD1_k127_2845683_4 TIGRFAM Outer membrane assembly lipoprotein YfiO K05807 - - 0.00000000000000000000000000000002836 143.0
DYD1_k127_2845683_5 serine threonine protein kinase - - - 0.000124 52.0
DYD1_k127_285583_0 Repeat domain in Vibrio, Colwellia, Bradyrhizobium and Shewanella - - - 0.0 1353.0
DYD1_k127_285583_1 Releases the supercoiling and torsional tension of DNA, which is introduced during the DNA replication and transcription, by transiently cleaving and rejoining one strand of the DNA duplex. Introduces a single-strand break via transesterification at a target site in duplex DNA. The scissile phosphodiester is attacked by the catalytic tyrosine of the enzyme, resulting in the formation of a DNA-(5'-phosphotyrosyl)-enzyme intermediate and the expulsion of a 3'-OH DNA strand. The free DNA strand then undergoes passage around the unbroken strand, thus removing DNA supercoils. Finally, in the religation step, the DNA 3'-OH attacks the covalent intermediate to expel the active-site tyrosine and restore the DNA phosphodiester backbone K03168 - 5.99.1.2 4.763e-280 883.0
DYD1_k127_285583_2 Peptidase family M28 - - - 1.036e-207 665.0
DYD1_k127_285583_3 ASPIC and UnbV - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001086 627.0
DYD1_k127_285583_4 hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004542 450.0
DYD1_k127_285583_5 COGs COG4299 conserved - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006681 404.0
DYD1_k127_285583_6 DNA protecting protein DprA K04096 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000007665 302.0
DYD1_k127_2865607_0 non-ribosomal peptide synthetase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003414 465.0
DYD1_k127_2865607_1 Peptidase family M28 - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005485 422.0
DYD1_k127_2865607_2 Tryptophan halogenase K16431 - - 0.00000000000000000000000000000000000000000000000007023 183.0
DYD1_k127_2865607_3 Prephenate dehydrogenase K04517 GO:0000166,GO:0003674,GO:0003824,GO:0005488,GO:0006082,GO:0006520,GO:0006570,GO:0006571,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0008652,GO:0008977,GO:0009058,GO:0009072,GO:0009073,GO:0009095,GO:0009987,GO:0016053,GO:0016491,GO:0016627,GO:0016628,GO:0019438,GO:0019752,GO:0036094,GO:0043167,GO:0043168,GO:0043436,GO:0044237,GO:0044238,GO:0044249,GO:0044281,GO:0044283,GO:0046394,GO:0048037,GO:0050662,GO:0051287,GO:0055114,GO:0070403,GO:0071704,GO:0097159,GO:1901265,GO:1901360,GO:1901362,GO:1901363,GO:1901564,GO:1901566,GO:1901576,GO:1901605,GO:1901607 1.3.1.12 0.00000000000000000000000000002448 122.0
DYD1_k127_2865607_4 Chorismate mutase type II K04093 - 5.4.99.5 0.0000000000000000003568 92.0
DYD1_k127_288898_0 gamma-glutamyltransferase K00681 - 2.3.2.2,3.4.19.13 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000338 561.0
DYD1_k127_288898_1 double-stranded DNA 3'-5' exodeoxyribonuclease activity K01142 - 3.1.11.2 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000002448 284.0
DYD1_k127_288898_2 Alkyl hydroperoxide reductase Thiol specific antioxidant Mal allergen K03564 - 1.11.1.15 0.00000000000000000000000000000000000000000000000000000000000000000000000266 246.0
DYD1_k127_288898_3 - - - - 0.00000000000000000000000000000000000000000003566 169.0
DYD1_k127_288898_5 bacterial-type flagellum-dependent cell motility - - - 0.0000000000000000000000000003049 119.0
DYD1_k127_288898_6 Endonuclease/Exonuclease/phosphatase family - - - 0.0000000000003039 74.0
DYD1_k127_2894830_0 Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family - - - 0.0 1308.0
DYD1_k127_2894830_1 Uncharacterised protein family (UPF0182) K09118 GO:0005575,GO:0005576,GO:0005618,GO:0005623,GO:0005886,GO:0005887,GO:0016020,GO:0016021,GO:0030312,GO:0031224,GO:0031226,GO:0044425,GO:0044459,GO:0044464,GO:0071944 - 3.679e-288 913.0
DYD1_k127_2894830_2 Domain of unknown function (DUF2088) - - - 2.856e-220 699.0
DYD1_k127_2894830_3 - - - - 5.089e-203 647.0
DYD1_k127_2894830_4 ribosome binding - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008704 532.0
DYD1_k127_2894830_5 Male sterility protein K01897 - 6.2.1.3 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004758 456.0
DYD1_k127_2894830_6 haloacid dehalogenase-like hydrolase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000007399 244.0
DYD1_k127_2894830_7 Tetratricopeptide repeat - - - 0.00000000000000000000000000001357 128.0
DYD1_k127_2911184_0 PFAM magnesium chelatase K07391 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002391 464.0
DYD1_k127_2911184_1 Catalyzes the reversible transfer of the terminal phosphate of ATP to form a long-chain polyphosphate (polyP) K00937 - 2.7.4.1 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000525 372.0
DYD1_k127_2911184_2 Lysin motif K08307 - - 0.0000000000000000000000000000000000000000000000000000000000000001657 243.0
DYD1_k127_292228_0 Cytidylyltransferase K00983 - 2.7.7.43 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007868 337.0
DYD1_k127_292228_2 ABC transporter, ATP-binding protein K18217,K18890 GO:0003674,GO:0003824,GO:0005215,GO:0005319,GO:0006810,GO:0006869,GO:0008150,GO:0010876,GO:0015399,GO:0015405,GO:0016462,GO:0016787,GO:0016817,GO:0016818,GO:0016887,GO:0017111,GO:0022804,GO:0022857,GO:0033036,GO:0034040,GO:0042623,GO:0042626,GO:0043492,GO:0051179,GO:0051234,GO:0055085,GO:0071702 - 0.0000000000000000099 85.0
DYD1_k127_2922465_0 Dehydrogenase K02030,K03810 - - 4.515e-213 682.0
DYD1_k127_2922465_1 PFAM asparagine synthase K01953 - 6.3.5.4 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007555 455.0
DYD1_k127_2922465_2 Glycosyl transferase family 2 K20534 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001108 370.0
DYD1_k127_2922465_3 Glycosyltransferase like family 2 K16870 - 2.4.1.289 0.0000000000000000000000000000000000000000000000000000000000000002669 235.0
DYD1_k127_2922465_4 methyltransferase K05928 - 2.1.1.95 0.0000000000000000000000000000000000000000000000000000000000355 215.0
DYD1_k127_2922465_5 Dolichyl-phosphate-mannose-protein mannosyltransferase - - - 0.00004868 55.0
DYD1_k127_2928419_0 radical SAM domain protein - - - 2.492e-291 902.0
DYD1_k127_2928419_1 Protein of unknown function (DUF692) K09930 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000792 327.0
DYD1_k127_2928419_10 - - - - 0.0000000002398 64.0
DYD1_k127_2928419_11 Endonuclease Exonuclease Phosphatase - - - 0.000001435 54.0
DYD1_k127_2928419_2 Reversible hydration of carbon dioxide K01673 - 4.2.1.1 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000001048 297.0
DYD1_k127_2928419_3 Bacterial extracellular solute-binding proteins, family 5 Middle K15580 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000379 276.0
DYD1_k127_2928419_4 tRNA cytidylyltransferase activity - - - 0.000000000000000000000000000000000000000000000000000000001549 209.0
DYD1_k127_2928419_5 Catalyzes the phosphorylation of the 3'-hydroxyl group of dephosphocoenzyme A to form coenzyme A K00859 - 2.7.1.24 0.000000000000000000000000000000000000000000000007498 180.0
DYD1_k127_2928419_6 oxidation-reduction process K09022 - 3.5.99.10 0.000000000000000000000000000000000000000000002743 167.0
DYD1_k127_2928419_7 Catalyzes the oxidation of 5,10- methylenetetrahydrofolate to 5,10-methenyltetrahydrofolate and then the hydrolysis of 5,10-methenyltetrahydrofolate to 10- formyltetrahydrofolate K01491 - 1.5.1.5,3.5.4.9 0.00000000000000000000000000000000000001436 147.0
DYD1_k127_2928419_8 L-threonylcarbamoyladenylate synthase K07566 - 2.7.7.87 0.00000000000000000000000000000000000005158 151.0
DYD1_k127_2928419_9 Belongs to the class IV-like SAM-binding methyltransferase superfamily. RNA methyltransferase TrmH family K03437 - - 0.0000000000000000000000000000000000001201 153.0
DYD1_k127_2931118_0 S-adenosyl-L-homocysteine hydrolase, NAD binding domain K01251 GO:0000096,GO:0003674,GO:0003824,GO:0004013,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006082,GO:0006139,GO:0006520,GO:0006534,GO:0006555,GO:0006575,GO:0006725,GO:0006732,GO:0006790,GO:0006807,GO:0008150,GO:0008152,GO:0009066,GO:0009069,GO:0009116,GO:0009119,GO:0009987,GO:0016787,GO:0016801,GO:0016802,GO:0017144,GO:0019752,GO:0033353,GO:0034641,GO:0042278,GO:0043436,GO:0044237,GO:0044238,GO:0044281,GO:0044424,GO:0044444,GO:0044464,GO:0046128,GO:0046439,GO:0046483,GO:0046498,GO:0046500,GO:0051186,GO:0055086,GO:0071704,GO:0072521,GO:1901135,GO:1901360,GO:1901564,GO:1901605,GO:1901657 3.3.1.1 1.314e-200 632.0
DYD1_k127_2931118_1 Catalyzes the formation of S-adenosylmethionine (AdoMet) from methionine and ATP. The overall synthetic reaction is composed of two sequential steps, AdoMet formation and the subsequent tripolyphosphate hydrolysis which occurs prior to release of AdoMet from the enzyme K00789 - 2.5.1.6 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002086 547.0
DYD1_k127_2931118_2 Permease, YjgP YjgQ - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000007983 282.0
DYD1_k127_2931118_3 Histidine kinase K07683 - 2.7.13.3 0.000000000000000000000000000000000000000000000000000008364 210.0
DYD1_k127_2931118_4 His Kinase A (phosphoacceptor) domain - - - 0.0000000000000000000000000000000000001632 160.0
DYD1_k127_2931118_5 adenosylhomocysteinase activity K01251 - 3.3.1.1 0.00000000000000000000000000000004866 141.0
DYD1_k127_2931118_6 Involved in DNA repair and RecF pathway recombination K03474,K03584 GO:0008150,GO:0009314,GO:0009628,GO:0050896 2.6.99.2 0.000001115 56.0
DYD1_k127_2941378_0 Cytochrome c-type biogenesis protein CcmF K02198 - - 1.41e-308 958.0
DYD1_k127_2941378_1 Required for the export of heme to the periplasm for the biogenesis of c-type cytochromes K02195 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002269 355.0
DYD1_k127_2941378_2 PFAM alkyl hydroperoxide reductase Thiol specific antioxidant Mal allergen K02199 - - 0.00000000000000000000000000000000000000000000000000000000000000000000002926 247.0
DYD1_k127_2941378_3 Heme chaperone required for the biogenesis of c-type cytochromes. Transiently binds heme delivered by CcmC and transfers the heme to apo-cytochromes in a process facilitated by CcmF and CcmH K02197 - - 0.00000000000000000000000000000000000000000000000000000008034 198.0
DYD1_k127_2941378_4 subunit of a heme lyase K02200 - - 0.000000000000000000000000000000000000001434 158.0
DYD1_k127_2941378_5 Tetratricopeptide repeat K02200 - - 0.0000000000000000000000000000000000001627 151.0
DYD1_k127_2941378_6 Required for the export of heme to the periplasm for the biogenesis of c-type cytochromes K02196 - - 0.000002183 55.0
DYD1_k127_2942698_0 Prolyl oligopeptidase, N-terminal beta-propeller domain K01322 - 3.4.21.26 1.926e-278 863.0
DYD1_k127_2942698_1 Carboxypeptidase regulatory-like domain - - - 2.058e-201 663.0
DYD1_k127_2942698_2 Aldo/keto reductase family - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000139 438.0
DYD1_k127_2942698_3 3-methyladenine DNA glycosylase 8-oxoguanine DNA glycosylase K03660 - 4.2.99.18 0.000000000000000000000000000000000000000000000000000000000000001181 229.0
DYD1_k127_2942698_4 PHP domain protein - - - 0.0000000000000000000000000000000001236 147.0
DYD1_k127_2958513_0 Beta-lactamase superfamily domain - - - 9.556e-196 620.0
DYD1_k127_2958513_1 Participates in transcription elongation, termination and antitermination - - - 0.00000000000000000000000000000000000000000000000139 190.0
DYD1_k127_2958513_2 Carboxypeptidase regulatory-like domain - - - 0.00004649 48.0
DYD1_k127_2965878_0 Domain of unknown function (DUF5117) - - - 1.468e-314 992.0
DYD1_k127_2965878_1 aldehyde oxidase and xanthine dehydrogenase, a b hammerhead K03520 - 1.2.5.3 3.616e-299 937.0
DYD1_k127_2965878_10 Is also involved in protein lipoylation via its role as an octanoyl lipoyl carrier protein intermediate K02437 - - 0.00000000000000000000000000000000000000000000001338 175.0
DYD1_k127_2965878_11 MacB-like periplasmic core domain K02004 - - 0.00000000000000000000000000000000000000000000007329 192.0
DYD1_k127_2965878_12 Belongs to the sigma-70 factor family. ECF subfamily K03088 - - 0.0000000000000000000000000000000000000003639 156.0
DYD1_k127_2965878_13 PFAM carbon monoxide dehydrogenase subunit G K09386 - - 0.000000000000000000000000000000000001716 147.0
DYD1_k127_2965878_14 Trypsin-like peptidase domain - - - 0.0000000000000000000000000000003352 140.0
DYD1_k127_2965878_15 Ferredoxin - - - 0.00000000000000000000002042 104.0
DYD1_k127_2965878_17 Belongs to the CDP-alcohol phosphatidyltransferase class-I family K07027 - - 0.00000000000000000087 102.0
DYD1_k127_2965878_3 The glycine cleavage system catalyzes the degradation of glycine. The P protein binds the alpha-amino group of glycine through its pyridoxal phosphate cofactor K00283 - 1.4.4.2 3.974e-196 623.0
DYD1_k127_2965878_4 The glycine cleavage system catalyzes the degradation of glycine. The P protein binds the alpha-amino group of glycine through its pyridoxal phosphate cofactor K00281,K00282 GO:0001505,GO:0003674,GO:0003824,GO:0004375,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005960,GO:0006082,GO:0006520,GO:0006544,GO:0006807,GO:0008150,GO:0008152,GO:0009069,GO:0009987,GO:0016491,GO:0016638,GO:0016642,GO:0017144,GO:0019752,GO:0032991,GO:0042133,GO:0043436,GO:0044237,GO:0044238,GO:0044281,GO:0044424,GO:0044444,GO:0044464,GO:0055114,GO:0065007,GO:0065008,GO:0071704,GO:1901564,GO:1901605,GO:1902494,GO:1990204 1.4.4.2 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008964 486.0
DYD1_k127_2965878_5 The glycine cleavage system catalyzes the degradation of glycine K00605 - 2.1.2.10 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000016 413.0
DYD1_k127_2965878_7 CO dehydrogenase flavoprotein C-terminal domain K03519 - 1.2.5.3 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000002286 297.0
DYD1_k127_2965878_8 [2Fe-2S] binding domain K03518 - 1.2.5.3 0.00000000000000000000000000000000000000000000000000000000000000000000000001073 253.0
DYD1_k127_2965878_9 PFAM Peptidase family M23 K21472 - - 0.0000000000000000000000000000000000000000000000001229 185.0
DYD1_k127_2971209_0 2-oxoglutarate dehydrogenase, E1 K00164 - 1.2.4.2 0.0 1244.0
DYD1_k127_2971209_1 PFAM Amidase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005518 605.0
DYD1_k127_2971209_2 FtsX-like permease family K02004 - - 0.000000000000000000000000000000000000000000000000000000000001925 216.0
DYD1_k127_2971209_3 DNA-binding transcription factor activity - - - 0.000000000000000000000000000000000000005109 149.0
DYD1_k127_2971209_4 Signal transducing histidine kinase homodimeric K03407 - 2.7.13.3 0.000000000000000000000000000001286 134.0
DYD1_k127_2971209_5 Phosphoglycerate mutase family - - - 0.000000000000000000008089 99.0
DYD1_k127_2971209_6 ornithine cyclodeaminase - - - 0.00000000000000000002316 94.0
DYD1_k127_2971209_7 KR domain - - - 0.00000000000000004548 82.0
DYD1_k127_2971209_9 Involved in transcription antitermination. Required for transcription of ribosomal RNA (rRNA) genes. Binds specifically to the boxA antiterminator sequence of the ribosomal RNA (rrn) operons K03625 - - 0.000004945 53.0
DYD1_k127_2977896_0 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001368 437.0
DYD1_k127_2977896_1 Hydantoinase/oxoprolinase N-terminal region K01469,K01473 - 3.5.2.14,3.5.2.9 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001752 395.0
DYD1_k127_2977896_2 Oxidoreductase family, C-terminal alpha/beta domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004714 323.0
DYD1_k127_2996433_0 asparagine synthase K01953 - 6.3.5.4 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003435 419.0
DYD1_k127_2996433_1 - - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002532 394.0
DYD1_k127_2996433_2 Glycosyl transferases group 1 - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008967 325.0
DYD1_k127_2996433_3 Glycosyl transferase family 2 - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000001399 267.0
DYD1_k127_2996433_4 Glycosyltransferase like family 2 - - - 0.000000000000000000000000000000000000000000000000000000000000000000000001102 255.0
DYD1_k127_2996433_5 transferase activity, transferring glycosyl groups - - - 0.000000000000000000000000000000000000000000000000000000000000522 226.0
DYD1_k127_2996433_6 Hexapeptide repeat of succinyl-transferase - - - 0.000000000000000000000000000000000000000000004011 173.0
DYD1_k127_3005982_0 PFAM NHL repeat - - - 2.884e-201 646.0
DYD1_k127_3005982_1 Endonuclease that is involved in the suppression of homologous recombination and may therefore have a key role in the control of bacterial genetic diversity K07456 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006896 499.0
DYD1_k127_3005982_2 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain K00074 - 1.1.1.157 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006491 417.0
DYD1_k127_3005982_3 Ferritin-like domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000122 284.0
DYD1_k127_3005982_4 Catalyzes the formation of 6,7-dimethyl-8- ribityllumazine by condensation of 5-amino-6-(D- ribitylamino)uracil with 3,4-dihydroxy-2-butanone 4-phosphate. This is the penultimate step in the biosynthesis of riboflavin K00794 GO:0000906,GO:0003674,GO:0003824,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006766,GO:0006767,GO:0006771,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009110,GO:0009231,GO:0009987,GO:0016740,GO:0016765,GO:0017144,GO:0018130,GO:0034641,GO:0042364,GO:0042726,GO:0042727,GO:0044237,GO:0044249,GO:0044271,GO:0044281,GO:0044283,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0071704,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576 2.5.1.78 0.000000000000000000000000000000000000000000000000000000001229 206.0
DYD1_k127_3005982_5 Antioxidant protein with alkyl hydroperoxidase activity. Required for the reduction of the AhpC active site cysteine residues and for the regeneration of the AhpC enzyme activity - - - 0.0000000000000000000000000000000000000001719 155.0
DYD1_k127_3005982_6 Involved in transcription antitermination. Required for transcription of ribosomal RNA (rRNA) genes. Binds specifically to the boxA antiterminator sequence of the ribosomal RNA (rrn) operons K03625 - - 0.000000000000000000000000000000001073 135.0
DYD1_k127_3005982_7 Rhomboid family K19225 - 3.4.21.105 0.0000000000000000000000000000006171 137.0
DYD1_k127_3005982_8 RNA polymerase that catalyzes the synthesis of short RNA molecules used as primers for DNA polymerase during DNA replication K02316 - - 0.0000000000000002255 79.0
DYD1_k127_3006117_0 Type II secretion system (T2SS), protein E, N-terminal domain K02454 - - 3.045e-225 712.0
DYD1_k127_3006117_1 His Kinase A (phosphoacceptor) domain K02484 - 2.7.13.3 3.57e-197 645.0
DYD1_k127_3006117_10 ABC-type molybdate transport system, permease component K02018 GO:0005575,GO:0005623,GO:0005886,GO:0005887,GO:0016020,GO:0016021,GO:0031224,GO:0031226,GO:0044425,GO:0044459,GO:0044464,GO:0071944 - 0.00000000000000000000000000000000000000000000000000000000000000004582 229.0
DYD1_k127_3006117_11 Belongs to the class I-like SAM-binding methyltransferase superfamily. RNA M5U methyltransferase family K03215 - 2.1.1.190 0.00000000000000000000000000000000000000000000000000000000000002218 226.0
DYD1_k127_3006117_12 Acts both as a biotin-- acetyl-CoA-carboxylase ligase and a repressor K03524 - 6.3.4.15 0.000000000000000000000000000000000000000000001995 175.0
DYD1_k127_3006117_13 outer membrane autotransporter barrel domain protein - - - 0.00000000000000000000000000000000001749 144.0
DYD1_k127_3006117_14 DNA-templated transcription, initiation K03088 - - 0.0000000000000000000000000001473 127.0
DYD1_k127_3006117_15 - - - - 0.00000000000003686 78.0
DYD1_k127_3006117_16 His Kinase A (phosphoacceptor) domain K02668 - 2.7.13.3 0.000000001952 66.0
DYD1_k127_3006117_17 PFAM UDP-glucoronosyl and UDP-glucosyl transferase - - - 0.0001282 46.0
DYD1_k127_3006117_18 Tetratricopeptide repeat - - - 0.0004706 52.0
DYD1_k127_3006117_2 Type II/IV secretion system protein K02669 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001383 560.0
DYD1_k127_3006117_3 Peptidase family M28 - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006593 490.0
DYD1_k127_3006117_4 Protein of unknown function (DUF1800) - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004411 490.0
DYD1_k127_3006117_5 Protein of unknown function (DUF1501) - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005914 465.0
DYD1_k127_3006117_6 Type II secretion system (T2SS), protein F K02455 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001645 417.0
DYD1_k127_3006117_7 Catalyzes the ATP-dependent conversion of 7-carboxy-7- deazaguanine (CDG) to 7-cyano-7-deazaguanine (preQ(0)) K06920 - 6.3.4.20 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002078 309.0
DYD1_k127_3006117_8 Catalyzes the phosphorylation of pantothenate (Pan), the first step in CoA biosynthesis K03525 - 2.7.1.33 0.000000000000000000000000000000000000000000000000000000000000000000000000000000002271 278.0
DYD1_k127_3006117_9 Catalyzes the complex heterocyclic radical-mediated conversion of 6-carboxy-5,6,7,8-tetrahydropterin (CPH4) to 7- carboxy-7-deazaguanine (CDG), a step common to the biosynthetic pathways of all 7-deazapurine-containing compounds K10026 - 4.3.99.3 0.0000000000000000000000000000000000000000000000000000000000000000000000001203 254.0
DYD1_k127_3008323_0 Oxidoreductase family, NAD-binding Rossmann fold - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008276 488.0
DYD1_k127_3008323_1 Asparagine synthase K01953 - 6.3.5.4 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002203 338.0
DYD1_k127_3008323_2 Highly conserved protein containing a thioredoxin domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000001694 297.0
DYD1_k127_3008323_3 PFAM sugar transferase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000002159 299.0
DYD1_k127_3008323_4 Hexapeptide repeat of succinyl-transferase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000007127 248.0
DYD1_k127_3008323_5 Protein of unknown function (DUF354) K09726 - - 0.000000000000000000000000000000000000000000000000000000000000000004067 238.0
DYD1_k127_3008323_6 PFAM Peptidase M20 - - - 0.0000000000000000000000000000000000000000000000000000000738 212.0
DYD1_k127_3008323_7 O-Antigen ligase K18814 - - 0.0001884 53.0
DYD1_k127_3019201_0 Tricorn protease C1 domain K08676 - - 0.0 1270.0
DYD1_k127_3019201_1 X-Pro dipeptidyl-peptidase C-terminal non-catalytic domain K06978 - - 2.495e-240 756.0
DYD1_k127_3019201_2 carboxylic acid catabolic process - - - 0.000000000000000000000000000000000000000000000000002643 190.0
DYD1_k127_3019201_3 Carboxypeptidase regulatory-like domain - - - 0.0000000000001774 83.0
DYD1_k127_302674_0 X-Pro dipeptidyl-peptidase (S15 family) - - - 1.587e-260 818.0
DYD1_k127_302674_1 - - - - 1.524e-246 794.0
DYD1_k127_302674_2 Signal transduction histidine kinase, subgroup 1, dimerisation phosphoacceptor domain - - - 0.0000000000000000006171 88.0
DYD1_k127_302801_0 domain protein - - - 0.0 1107.0
DYD1_k127_302801_1 Amino acid permease K03294 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007254 443.0
DYD1_k127_302801_2 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III K01840,K03431,K15778 - 5.4.2.10,5.4.2.2,5.4.2.8 0.00000000000000000000000000000000000000000000000003368 184.0
DYD1_k127_302801_3 - - - - 0.000000000000000000000000000000000000008309 147.0
DYD1_k127_302801_4 hydroperoxide reductase activity K01607 - 4.1.1.44 0.0000000000000000000000000000000001446 134.0
DYD1_k127_3034371_0 Dienelactone hydrolase family - - - 3.645e-312 973.0
DYD1_k127_3034371_1 undecaprenyldiphospho-muramoylpentapeptide beta-N-acetylglucosaminyltransferase activity K03429 - 2.4.1.315 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001415 490.0
DYD1_k127_3034371_2 Acetyltransferase (GNAT) domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000064 229.0
DYD1_k127_3034371_3 Belongs to the UPF0234 family K09767 - - 0.00000000000000000000000000000000000000000000000000000004391 201.0
DYD1_k127_3034371_4 Sugar (and other) transporter - - - 0.000000000000000000000000000000000000000000000001176 177.0
DYD1_k127_3034371_5 - - - - 0.00000000000000000000000004447 113.0
DYD1_k127_3034371_7 Belongs to the FPP GGPP synthase family K02523 - 2.5.1.90 0.00000007769 58.0
DYD1_k127_3034371_8 serine-type endopeptidase activity K04771,K07126 - 3.4.21.107 0.0000002808 61.0
DYD1_k127_3034371_9 Outer membrane protein (OmpH-like) K06142 - - 0.00001942 54.0
DYD1_k127_3105630_0 Alpha-2-Macroglobulin K06894 - - 0.00000000000000000000000000000000000000000000000000000000004316 216.0
DYD1_k127_3105630_1 Stage II sporulation protein K06381 - - 0.0000000000000000002882 102.0
DYD1_k127_3105630_2 penicillin-binding protein K05364 GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0044424,GO:0044444,GO:0044464 - 0.0000000000007177 81.0
DYD1_k127_3106164_0 ASPIC and UnbV - - - 2.116e-200 638.0
DYD1_k127_3106164_1 ASPIC and UnbV - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003871 555.0
DYD1_k127_3106164_2 Tetratricopeptide repeat - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001828 373.0
DYD1_k127_3106164_3 TPR repeat - - - 0.00000000000000000000001598 114.0
DYD1_k127_3140450_0 IgA Peptidase M64 - - - 3.049e-195 619.0
DYD1_k127_3140450_1 An RNase that has 5'-3' exonuclease and possibly endonuclease activity. Involved in maturation of rRNA and in some organisms also mRNA maturation and or decay K12574 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005698 522.0
DYD1_k127_3140450_2 Belongs to the short-chain dehydrogenases reductases (SDR) family - - - 0.000000000000000000000000000000000000000000000000000000002033 209.0
DYD1_k127_3140450_3 Putative zinc-finger - - - 0.0000000000000000000000000000000000000000000000000005486 194.0
DYD1_k127_3140450_4 Sigma-70, region 4 K03088 - - 0.000000000000000000000000000000000000000000000006954 177.0
DYD1_k127_3140450_5 Catalyzes the dephosphorylation of undecaprenyl diphosphate (UPP). Confers resistance to bacitracin K06153 - 3.6.1.27 0.000000000000000000000000000000001476 137.0
DYD1_k127_314765_0 Transferrin receptor-like dimerisation domain K01301 - 3.4.17.21 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007042 512.0
DYD1_k127_3159557_0 Belongs to the glycosyl hydrolase 13 family K21575 - 3.2.1.135 2.247e-285 892.0
DYD1_k127_3159557_1 cell shape determining protein MreB K03569 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003704 507.0
DYD1_k127_3159557_2 Aminotransferase class-III - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008898 363.0
DYD1_k127_3159557_3 Cell shape determining protein, MreB Mrl family K03569 - - 0.000000000000000000000000000000000000000000000000000000000000000000001354 249.0
DYD1_k127_3159557_4 Aminotransferase class-III - - - 0.000000000000000000000000000000000000000000000000000000000000000002849 230.0
DYD1_k127_3159557_5 DinB family - - - 0.0000000000000000000000000000000000000000382 160.0
DYD1_k127_3159557_6 chaperone-mediated protein folding - - - 0.0000000000000000000000000000002425 141.0
DYD1_k127_3171587_0 Catalyzes the NADP-dependent rearrangement and reduction of 1-deoxy-D-xylulose-5-phosphate (DXP) to 2-C-methyl-D-erythritol 4-phosphate (MEP) K00099 - 1.1.1.267 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008605 395.0
DYD1_k127_3171587_1 Catalyzes the condensation of isopentenyl diphosphate (IPP) with allylic pyrophosphates generating different type of terpenoids K00806 - 2.5.1.31 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000119 276.0
DYD1_k127_3171587_2 orotate phosphoribosyltransferase activity K00762 - 2.4.2.10 0.000000000000000000000000000000000000000000000000000000000000002596 223.0
DYD1_k127_3171587_3 tRNA pseudouridine synthase K06173 - 5.4.99.12 0.00000000000000000000000000000000000000000002173 169.0
DYD1_k127_3171587_4 Required for replicative DNA synthesis. This DNA polymerase also exhibits 3' to 5' exonuclease activity K02342,K03763 - 2.7.7.7 0.00000000000000000000000000000000000000001831 165.0
DYD1_k127_3171587_5 Cytidylyltransferase family K00981 - 2.7.7.41 0.00000000000000000000000000000000000003791 154.0
DYD1_k127_3171587_6 SNARE associated Golgi protein - - - 0.0000000000000000000477 99.0
DYD1_k127_3171587_7 SNARE associated Golgi protein - - - 0.0000000000000003354 86.0
DYD1_k127_3171587_8 - - - - 0.0000000000001693 80.0
DYD1_k127_3171587_9 RDD family - - - 0.0000002061 59.0
DYD1_k127_3184250_0 Catalyzes the condensation of para-aminobenzoate (pABA) with 6-hydroxymethyl-7,8-dihydropterin diphosphate (DHPt-PP) to form 7,8-dihydropteroate (H2Pte), the immediate precursor of folate derivatives K00796,K13941 - 2.5.1.15,2.7.6.3 0.000000000000000000000000000000000000000000000000000000002617 207.0
DYD1_k127_3184250_1 DNA polymerase III delta subunit K02340 - 2.7.7.7 0.0000000000000000000000000000000000002758 153.0
DYD1_k127_3184250_2 Lipopolysaccharide-assembly - - - 0.00000000000000867 82.0
DYD1_k127_3184250_3 Binds directly to 16S ribosomal RNA K02968 - - 0.0000000000002819 74.0
DYD1_k127_3184250_4 - - - - 0.0000000000002819 74.0
DYD1_k127_3194132_0 PFAM Gamma-glutamyltranspeptidase K00681 - 2.3.2.2,3.4.19.13 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002137 562.0
DYD1_k127_3194132_1 Cysteine-rich domain K11473 - - 0.000000000000000000000000000000003254 136.0
DYD1_k127_3194132_2 FAD linked oxidases, C-terminal domain K11472 - - 0.000001971 57.0
DYD1_k127_3195507_0 Involved in mRNA degradation. Catalyzes the phosphorolysis of single-stranded polyribonucleotides processively in the 3'- to 5'-direction K00962 - 2.7.7.8 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005877 567.0
DYD1_k127_3195507_1 glycyl-tRNA aminoacylation K01880 GO:0000166,GO:0000287,GO:0003674,GO:0003824,GO:0004812,GO:0004820,GO:0005488,GO:0005515,GO:0005524,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006082,GO:0006139,GO:0006399,GO:0006412,GO:0006418,GO:0006426,GO:0006518,GO:0006520,GO:0006725,GO:0006807,GO:0008144,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009345,GO:0009987,GO:0010467,GO:0016070,GO:0016594,GO:0016597,GO:0016874,GO:0016875,GO:0017076,GO:0019538,GO:0019752,GO:0030554,GO:0031406,GO:0032553,GO:0032555,GO:0032559,GO:0032991,GO:0034641,GO:0034645,GO:0034660,GO:0035639,GO:0036094,GO:0042165,GO:0042802,GO:0042803,GO:0043038,GO:0043039,GO:0043043,GO:0043167,GO:0043168,GO:0043169,GO:0043170,GO:0043177,GO:0043436,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044281,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0046872,GO:0046983,GO:0071704,GO:0090304,GO:0097159,GO:0097367,GO:0140098,GO:0140101,GO:1901265,GO:1901360,GO:1901363,GO:1901564,GO:1901566,GO:1901576,GO:1902494 6.1.1.14 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000206 506.0
DYD1_k127_3195507_2 Has lipid A 3-O-deacylase activity. Hydrolyzes the ester bond at the 3 position of lipid A, a bioactive component of lipopolysaccharide (LPS), thereby releasing the primary fatty acyl moiety - - - 0.00001276 57.0
DYD1_k127_3211153_0 Catalyzes the attachment of proline to tRNA(Pro) in a two-step reaction proline is first activated by ATP to form Pro- AMP and then transferred to the acceptor end of tRNA(Pro). As ProRS can inadvertently accommodate and process non-cognate amino acids such as alanine and cysteine, to avoid such errors it has two additional distinct editing activities against alanine. One activity is designated as 'pretransfer' editing and involves the tRNA(Pro)-independent hydrolysis of activated Ala-AMP. The other activity is designated 'posttransfer' editing and involves deacylation of mischarged Ala-tRNA(Pro). The misacylated Cys- tRNA(Pro) is not edited by ProRS K01881 - 6.1.1.15 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004662 591.0
DYD1_k127_3211153_1 peptidyl-tyrosine sulfation K03217,K06872 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000916 278.0
DYD1_k127_3211153_2 Lecithin:cholesterol acyltransferase - - - 0.000000002646 64.0
DYD1_k127_3222313_0 amino acid - - - 8.168e-254 800.0
DYD1_k127_3222313_1 Catalyzes the reduction of ribonucleotides to deoxyribonucleotides. May function to provide a pool of deoxyribonucleotide precursors for DNA repair during oxygen limitation and or for immediate growth after restoration of oxygen K00525 - 1.17.4.1 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002226 469.0
DYD1_k127_3222313_2 Belongs to the GARS family K01945 - 6.3.4.13 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002305 395.0
DYD1_k127_3222313_3 PspA/IM30 family K03969 - - 0.0000000000000000000000000000000000004255 151.0
DYD1_k127_3222313_4 Probable zinc-ribbon domain - - - 0.00000000000000000000000000005161 120.0
DYD1_k127_3222313_5 - - - - 0.0000000000000009982 87.0
DYD1_k127_3222313_6 Bacterial regulatory protein, Fis family K15012 - - 0.0000000001171 69.0
DYD1_k127_3222313_7 - - - - 0.000000005697 61.0
DYD1_k127_3222313_8 PFAM HNH endonuclease - - - 0.0000003592 53.0
DYD1_k127_3222313_9 metalloprotease - GO:0003674,GO:0003824,GO:0004175,GO:0004222,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006508,GO:0006807,GO:0006950,GO:0006996,GO:0008150,GO:0008152,GO:0008233,GO:0008237,GO:0009266,GO:0009409,GO:0009507,GO:0009526,GO:0009528,GO:0009536,GO:0009628,GO:0009657,GO:0009658,GO:0009706,GO:0009941,GO:0009987,GO:0016020,GO:0016043,GO:0016787,GO:0019538,GO:0019866,GO:0031090,GO:0031967,GO:0031969,GO:0031975,GO:0042170,GO:0043170,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0044238,GO:0044422,GO:0044424,GO:0044434,GO:0044435,GO:0044444,GO:0044446,GO:0044464,GO:0050896,GO:0070011,GO:0071704,GO:0071840,GO:0140096,GO:1901564 - 0.00004346 52.0
DYD1_k127_3250597_0 Beta-ketoacyl synthase, N-terminal domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003873 575.0
DYD1_k127_326173_0 Peptide chain release factor 1 directs the termination of translation in response to the peptide chain termination codons UAG and UAA K02835 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003434 477.0
DYD1_k127_326173_1 Protein of unknown function (DUF1385) - - - 0.00000000000000000000000000000000000000000000000000431 190.0
DYD1_k127_326173_2 Belongs to the phosphoglycerate mutase family K02226,K15640,K22305 - 3.1.3.3,3.1.3.73 0.000000000000000000000000000000004756 138.0
DYD1_k127_3270342_0 NADH ubiquinone oxidoreductase subunit 5 chain L Multisubunit Na H antiporter, MnhA subunit K00341 - 1.6.5.3 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002753 569.0
DYD1_k127_3270342_1 Proton-conducting membrane transporter K00342 - 1.6.5.3 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003396 411.0
DYD1_k127_3270342_2 NADH-ubiquinone/plastoquinone oxidoreductase chain 4L K00340 - 1.6.5.3 0.00000000000000000000000000004244 119.0
DYD1_k127_3275760_0 Protein of unknown function, DUF255 K06888 - - 4.727e-233 739.0
DYD1_k127_3275760_1 The pyruvate dehydrogenase complex catalyzes the overall conversion of pyruvate to acetyl-CoA and CO(2) K00162 - 1.2.4.1 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001088 436.0
DYD1_k127_3275760_2 Protein conserved in bacteria - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001023 438.0
DYD1_k127_3275760_3 HD domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004272 407.0
DYD1_k127_3275760_4 The pyruvate dehydrogenase complex catalyzes the overall conversion of pyruvate to acetyl-CoA and CO(2) K00161,K11381 - 1.2.4.1,1.2.4.4 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000487 393.0
DYD1_k127_3275760_5 - - - - 0.000000000000000000000000000000000000000000001257 174.0
DYD1_k127_3275760_6 2-oxoacid dehydrogenases acyltransferase (catalytic domain) K00162,K00627 - 1.2.4.1,2.3.1.12 0.0000000000000000000000000189 116.0
DYD1_k127_3277732_0 Aldehyde oxidase and xanthine dehydrogenase a b hammerhead K03520,K11177 - 1.17.1.4,1.2.5.3 0.0 1304.0
DYD1_k127_3277732_1 2Fe-2S -binding domain protein K03518 - 1.2.5.3 0.0000000000000000000000000000000000000000000000000000000000000000000048 236.0
DYD1_k127_3277732_2 XdhC Rossmann domain - - - 0.00000000000000000000000000000000000000000000000000000000000000001218 234.0
DYD1_k127_3286518_0 Catalyzes the methylthiolation of an aspartic acid residue of ribosomal protein S12 K14441 - 2.8.4.4 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006852 447.0
DYD1_k127_3286518_1 PFAM Glutamine cyclotransferase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000005343 281.0
DYD1_k127_3286518_2 Mediates influx of magnesium ions K03284 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000008477 257.0
DYD1_k127_3286518_3 Domain of unknown function (DUF3488) - - - 0.00000000000000000000000000000000000000000000000000000000000000000000002498 267.0
DYD1_k127_3286518_4 D-isomer specific 2-hydroxyacid dehydrogenase K00058 - 1.1.1.399,1.1.1.95 0.00000000000000000000000000000008357 127.0
DYD1_k127_3286518_5 Phosphatidylglycerophosphatase A K01095 - 3.1.3.27 0.0000000000000000000000007452 111.0
DYD1_k127_3290296_0 COG0365 Acyl-coenzyme A synthetases AMP-(fatty) acid ligases - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009762 385.0
DYD1_k127_3290296_1 Tetratricopeptide repeat - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000007913 292.0
DYD1_k127_3290296_2 PFAM thioesterase superfamily - - - 0.00000000000000000000000000000000000000000000000000000000000000000001312 235.0
DYD1_k127_3309558_0 Involved in chlorophyll biosynthesis. Catalyzes the insertion of magnesium ion into protoporphyrin IX to yield Mg- protoporphyrin IX K03405 - 6.6.1.1 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003922 592.0
DYD1_k127_3309558_1 Metallo-beta-lactamase superfamily - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001017 378.0
DYD1_k127_3309558_2 Oxidoreductase, molybdopterin - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000008969 278.0
DYD1_k127_3312306_0 Multicopper oxidase - - - 0.0 1143.0
DYD1_k127_3312306_1 Phytanoyl-CoA dioxygenase (PhyH) - - - 0.0000000000000000000000000000000000000000000002491 178.0
DYD1_k127_3312306_2 glycosyltransferase involved in LPS biosynthesis K07270 - - 0.0000000000000000000000000000000000000000001023 173.0
DYD1_k127_3312306_3 Phytanoyl-CoA dioxygenase (PhyH) - - - 0.0000000000000000000000000000000000000005747 158.0
DYD1_k127_3312306_4 COG0463 Glycosyltransferases involved in cell wall biogenesis - - - 0.00000000000000000000000006155 119.0
DYD1_k127_3315323_0 Part of a stress-induced multi-chaperone system, it is involved in the recovery of the cell from heat-induced damage, in cooperation with DnaK, DnaJ and GrpE K03695 - - 0.0 1109.0
DYD1_k127_3315323_1 Prevents misfolding and promotes the refolding and proper assembly of unfolded polypeptides generated under stress conditions K04077 GO:0003674,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006457,GO:0006458,GO:0008150,GO:0009987,GO:0016465,GO:0032991,GO:0044183,GO:0044424,GO:0044444,GO:0044445,GO:0044464,GO:0051082,GO:0061077,GO:0101031,GO:1990220 - 2.618e-219 692.0
DYD1_k127_3315323_10 Participates actively in the response to hyperosmotic and heat shock by preventing the aggregation of stress-denatured proteins, in association with DnaK and GrpE. It is the nucleotide exchange factor for DnaK and may function as a thermosensor. Unfolded proteins bind initially to DnaJ K03687 GO:0000166,GO:0000774,GO:0001871,GO:0003674,GO:0005488,GO:0005515,GO:0005575,GO:0005623,GO:0008150,GO:0009986,GO:0017076,GO:0030234,GO:0030246,GO:0030247,GO:0030554,GO:0036094,GO:0044464,GO:0050790,GO:0051082,GO:0060589,GO:0060590,GO:0065007,GO:0065009,GO:0097159,GO:0098772,GO:1901265,GO:1901363,GO:2001065 - 0.00000000000000000006549 97.0
DYD1_k127_3315323_11 - - - - 0.000005767 57.0
DYD1_k127_3315323_12 Tricorn protease C1 domain K03797 - 3.4.21.102 0.0000102 49.0
DYD1_k127_3315323_2 Phosphate acyltransferases K01897 - 6.2.1.3 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008307 585.0
DYD1_k127_3315323_3 Belongs to the ClpA ClpB family K03696 GO:0006950,GO:0008150,GO:0010035,GO:0010038,GO:0042221,GO:0046686,GO:0046688,GO:0050896,GO:0097501,GO:1990169,GO:1990170 - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005115 493.0
DYD1_k127_3315323_4 Natural resistance-associated macrophage protein - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001695 441.0
DYD1_k127_3315323_5 MgtE intracellular N domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002734 424.0
DYD1_k127_3315323_6 with different specificities (related to short-chain alcohol K00059 - 1.1.1.100 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000002554 284.0
DYD1_k127_3315323_7 Mechanosensitive ion channel - - - 0.00000000000000000000000000000000000000000000000000000000008291 219.0
DYD1_k127_3315323_8 Belongs to the small heat shock protein (HSP20) family K13993 - - 0.00000000000000000000000000000000000000000001011 168.0
DYD1_k127_3315323_9 Hsp20/alpha crystallin family K13993 - - 0.0000000000000000000000006239 109.0
DYD1_k127_3349953_0 Response regulator with CheY-like receiver, AAA-type ATPase, and DNA-binding domains K07714 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008074 444.0
DYD1_k127_3349953_1 Flotillin K07192 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006216 392.0
DYD1_k127_3349953_2 Histidine kinase - - - 0.00000000000000000000000000000000000000000000000000000000000000004506 242.0
DYD1_k127_3349953_3 Methyltransferase domain K00588 - 2.1.1.104 0.00000000000000000000000000000000000000000000000000000000000209 216.0
DYD1_k127_3349953_4 Membrane protein implicated in regulation of membrane protease activity - - - 0.00000001439 64.0
DYD1_k127_3349953_5 - - - - 0.0000006387 59.0
DYD1_k127_3350296_0 Methylmalonyl-CoA mutase K01847,K01848 - 5.4.99.2 5.106e-231 726.0
DYD1_k127_3350296_1 S-adenosylmethionine-dependent methyltransferase K06969 - 2.1.1.191 0.00000000000000000000000000004807 120.0
DYD1_k127_3351726_0 Prolyl oligopeptidase family - - - 3.577e-204 655.0
DYD1_k127_3351726_1 Winged helix DNA-binding domain K09927 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001196 446.0
DYD1_k127_3351726_2 beta' subunit K01754 - 4.3.1.19 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001967 402.0
DYD1_k127_3351726_3 Protein of unknown function DUF72 - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000007162 300.0
DYD1_k127_3351726_4 TonB dependent receptor - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000009044 287.0
DYD1_k127_3357406_0 The UvrABC repair system catalyzes the recognition and processing of DNA lesions. UvrA is an ATPase and a DNA-binding protein. A damage recognition complex composed of 2 UvrA and 2 UvrB subunits scans DNA for abnormalities. When the presence of a lesion has been verified by UvrB, the UvrA molecules dissociate K03701 - - 2.834e-282 899.0
DYD1_k127_3357406_1 COG3335 Transposase and inactivated derivatives K07494 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007023 513.0
DYD1_k127_3357406_2 Yqey-like protein K09117 - - 0.000000000000000000000000000000003338 133.0
DYD1_k127_3357406_3 TonB dependent receptor K02014,K16087 - - 0.000000000000000000000000006539 129.0
DYD1_k127_3357406_4 Belongs to the peptidase M48B family - - - 0.0000000000000000000000001359 118.0
DYD1_k127_3357406_5 Penicillinase repressor - - - 0.00000000000000000000002743 107.0
DYD1_k127_3357406_6 Transcriptional regulatory protein, C terminal K07775 - - 0.00000000000003009 77.0
DYD1_k127_3363024_0 COG0457 FOG TPR repeat - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001898 522.0
DYD1_k127_3363024_1 Putative cyclase K07130 - 3.5.1.9 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000005335 298.0
DYD1_k127_3363024_2 ABC transporter K02065 - - 0.0000000000000000000000000000000000000000000000000000000000000000000005822 247.0
DYD1_k127_3363024_3 Belongs to the MlaE permease family K02066 - - 0.00000000000000000000000000000000000000000000000000000000000000001023 232.0
DYD1_k127_3363024_4 MlaD protein K02067 - - 0.000000000000000000000000000000000000000000000000000006237 204.0
DYD1_k127_3363024_5 Putative S-adenosyl-L-methionine-dependent methyltransferase - - - 0.0000000000000000000000000000003922 127.0
DYD1_k127_3364414_0 Belongs to the peptidase S33 family K01259 - 3.4.11.5 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001281 456.0
DYD1_k127_3364414_1 dioxygenase activity - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009448 437.0
DYD1_k127_3364414_10 - - - - 0.0000000000000000000000000000611 119.0
DYD1_k127_3364414_11 Membrane - - - 0.000000000000000000000001822 105.0
DYD1_k127_3364414_12 Predicted membrane protein (DUF2231) - - - 0.00000000000000000007381 94.0
DYD1_k127_3364414_13 His Kinase A (phosphoacceptor - - - 0.00000000001028 69.0
DYD1_k127_3364414_2 Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain K00256 - 1.3.99.16 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002166 366.0
DYD1_k127_3364414_3 - - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004064 308.0
DYD1_k127_3364414_4 Cytochrome c - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000238 301.0
DYD1_k127_3364414_5 Phosphoribosyl transferase domain K07100 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000005755 292.0
DYD1_k127_3364414_6 eRF1 domain 3 - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000003816 284.0
DYD1_k127_3364414_7 Alpha-aspartyl dipeptidase-like K05995 GO:0003674,GO:0003824,GO:0006508,GO:0006807,GO:0008150,GO:0008152,GO:0008233,GO:0016787,GO:0019538,GO:0043170,GO:0044238,GO:0071704,GO:0140096,GO:1901564 3.4.13.21 0.00000000000000000000000000000000000000000000000000000000000000000000000000007577 264.0
DYD1_k127_3364414_8 conserved protein (COG2071) K09166 - - 0.000000000000000000000000000000000000000000000000000000000227 211.0
DYD1_k127_3364414_9 [2Fe-2S] binding domain K03518 - 1.2.5.3 0.0000000000000000000000000000000000000000000000000000005555 197.0
DYD1_k127_3370362_0 Domain of unknown function (DUF362) - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008994 350.0
DYD1_k127_3370362_1 Capsular polysaccharide biosynthesis protein CapK K01912 - 6.2.1.30 0.000000000000000000000000000000000007325 153.0
DYD1_k127_3370362_2 3-demethylubiquinone-9 3-O-methyltransferase activity - - - 0.0000000000000000000000009543 112.0
DYD1_k127_3370362_3 xylanase chitin deacetylase - - - 0.000000000000000001086 88.0
DYD1_k127_3370362_4 O-Antigen ligase - - - 0.0000000002888 73.0
DYD1_k127_3370362_5 Glycosyltransferase Family 4 - - - 0.000000000349 65.0
DYD1_k127_3377105_0 Cytochrome P450 - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001464 441.0
DYD1_k127_3377105_1 Dienelactone hydrolase family - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000261 412.0
DYD1_k127_3377105_2 Peptidase family M28 - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001906 321.0
DYD1_k127_3377105_3 oxidoreductase activity K12511 - - 0.0000000000000000000000000001681 132.0
DYD1_k127_3377105_4 Lanthionine synthetase C family protein - - - 0.000000000000005224 89.0
DYD1_k127_3377105_5 PA domain - - - 0.0000000006232 72.0
DYD1_k127_3377105_6 Integrase core domain - - - 0.0000009448 51.0
DYD1_k127_3384155_0 Catalyzes the ferrous insertion into protoporphyrin IX K01772 GO:0003674,GO:0003824,GO:0004325,GO:0006725,GO:0006778,GO:0006779,GO:0006783,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009987,GO:0016829,GO:0018130,GO:0019438,GO:0033013,GO:0033014,GO:0034641,GO:0042168,GO:0042440,GO:0044237,GO:0044249,GO:0044271,GO:0046148,GO:0046483,GO:0051186,GO:0051188,GO:0071704,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576 4.99.1.1,4.99.1.9 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001015 439.0
DYD1_k127_3384155_1 Catalyzes the decarboxylation of four acetate groups of uroporphyrinogen-III to yield coproporphyrinogen-III K01599 - 4.1.1.37 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000129 415.0
DYD1_k127_3384155_2 Catalyzes the 6-electron oxidation of protoporphyrinogen-IX to form protoporphyrin-IX K00231 - 1.3.3.15,1.3.3.4 0.000000000000000000000000000000000000001319 150.0
DYD1_k127_3384155_3 - - - - 0.00000000000000000000000000000006324 143.0
DYD1_k127_3384155_4 lysine biosynthetic process via aminoadipic acid - - - 0.000000000000000000000000002796 118.0
DYD1_k127_3384155_5 Sigma-70 region 2 K03088 - - 0.00000000000000000008021 96.0
DYD1_k127_3384155_6 Catalyzes the decarboxylation of four acetate groups of uroporphyrinogen-III to yield coproporphyrinogen-III K01599 - 4.1.1.37 0.000000000001975 67.0
DYD1_k127_3384155_7 Putative adhesin - - - 0.0000000001002 74.0
DYD1_k127_3485419_0 AMP-binding enzyme K01897 - 6.2.1.3 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001828 505.0
DYD1_k127_3485419_1 Serine Threonine protein kinase K12132 - 2.7.11.1 0.0000000000000000000000000000000000000000000000000000000004289 213.0
DYD1_k127_3485419_2 Channel that opens in response to stretch forces in the membrane lipid bilayer. May participate in the regulation of osmotic pressure changes within the cell K03282 GO:0003674,GO:0005215,GO:0005575,GO:0006810,GO:0006811,GO:0006884,GO:0008150,GO:0008361,GO:0008381,GO:0009987,GO:0009992,GO:0015267,GO:0016020,GO:0016021,GO:0016043,GO:0019725,GO:0022803,GO:0022836,GO:0022857,GO:0030104,GO:0031224,GO:0032535,GO:0042592,GO:0044425,GO:0048878,GO:0051179,GO:0051234,GO:0055082,GO:0055085,GO:0065007,GO:0065008,GO:0071840,GO:0090066 - 0.00000000000000000000000000000000000000000000000007183 181.0
DYD1_k127_3485419_3 PFAM regulatory protein TetR K13770 - - 0.0000000000000000000000000000000000000000000000001997 183.0
DYD1_k127_3485419_4 Histidine kinase - - - 0.00000000000000000000000005438 111.0
DYD1_k127_349312_0 COG1009 NADH ubiquinone oxidoreductase subunit 5 (chain L) Multisubunit Na H antiporter MnhA subunit K00341 - 1.6.5.3 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005712 546.0
DYD1_k127_349312_1 TIGRFAM proton-translocating NADH-quinone oxidoreductase, chain M K00342 - 1.6.5.3 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001948 511.0
DYD1_k127_349312_10 NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be a menaquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient K00340 - 1.6.5.3 0.00000000000000000000000000000007639 127.0
DYD1_k127_349312_11 PFAM NADH-ubiquinone plastoquinone oxidoreductase chain 6 K00339 - 1.6.5.3 0.00000000000000000000000000005189 122.0
DYD1_k127_349312_12 Belongs to the peptidase S1C family K04771 GO:0003674,GO:0003824,GO:0004175,GO:0004252,GO:0005575,GO:0005623,GO:0006508,GO:0006807,GO:0008150,GO:0008152,GO:0008233,GO:0008236,GO:0016787,GO:0017171,GO:0019538,GO:0030288,GO:0030313,GO:0031975,GO:0042597,GO:0043170,GO:0044238,GO:0044464,GO:0070011,GO:0071704,GO:0140096,GO:1901564 3.4.21.107 0.00000000000000000001047 107.0
DYD1_k127_349312_13 GMP synthase (glutamine-hydrolyzing) activity K01951 - 6.3.5.2 0.00000002324 65.0
DYD1_k127_349312_14 Is the anti-sigma factor for SigW. The presence of RsiW leads to the inactivation of SigW, and its proteolytic destruction to sigma-W activation - GO:0005575,GO:0016020 - 0.0001806 52.0
DYD1_k127_349312_2 ATP-dependent carboxylate-amine ligase which exhibits weak glutamate--cysteine ligase activity K06048 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000345 490.0
DYD1_k127_349312_3 PFAM NADH ubiquinone oxidoreductase, subunit G, iron-sulphur binding K00336 - 1.6.5.3 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002829 452.0
DYD1_k127_349312_4 NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient K00343 - 1.6.5.3 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005213 415.0
DYD1_k127_349312_5 ligase activity - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008495 377.0
DYD1_k127_349312_6 Evidence 4 Homologs of previously reported genes of - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001349 369.0
DYD1_k127_349312_7 NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient. This subunit may bind ubiquinone K00337 - 1.6.5.3 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001792 360.0
DYD1_k127_349312_8 3-methyladenine DNA glycosylase 8-oxoguanine DNA glycosylase K01247 - 3.2.2.21 0.0000000000000000000000000000000000000000000000000000000000001769 218.0
DYD1_k127_349312_9 TIGRFAM RNA polymerase sigma factor, sigma-70 family K03088 - - 0.0000000000000000000000000000000006175 139.0
DYD1_k127_3493279_0 ATP dependent DNA ligase C terminal region - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005386 557.0
DYD1_k127_3493279_1 Pyridoxal-phosphate dependent enzyme K01754 - 4.3.1.19 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008878 326.0
DYD1_k127_3493279_2 Trypsin-like serine proteases, typically periplasmic, contain C-terminal PDZ domain - - - 0.000000000000000000000000000000000006684 151.0
DYD1_k127_3493279_3 PIN domain - - - 0.0000000000000000000000006916 108.0
DYD1_k127_3493279_4 ATPase family associated with various cellular activities (AAA) - - - 0.00000000000000000000002363 103.0
DYD1_k127_3493279_5 Transposase IS200 like - - - 0.00000000000000001643 89.0
DYD1_k127_3493279_6 Protein of unknown function (DUF433) - - - 0.0000000000179 68.0
DYD1_k127_3493279_7 toxin-antitoxin pair type II binding - - - 0.0000002343 56.0
DYD1_k127_350292_0 protein kinase activity - - - 0.0000000000000000000000000000000000000000000000000000000000000008392 239.0
DYD1_k127_350292_1 von Willebrand factor (vWF) type A domain - - - 0.00000000000000000000000000000000000000000000000000000000001254 213.0
DYD1_k127_350292_2 Sigma factor PP2C-like phosphatases - - - 0.00000000000000000000000002175 118.0
DYD1_k127_3506546_0 Catalyzes the synthesis of GMP from XMP K01951 GO:0003674,GO:0003824,GO:0003921,GO:0003922,GO:0006139,GO:0006163,GO:0006164,GO:0006177,GO:0006725,GO:0006753,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009116,GO:0009117,GO:0009119,GO:0009123,GO:0009124,GO:0009126,GO:0009127,GO:0009150,GO:0009152,GO:0009156,GO:0009161,GO:0009163,GO:0009165,GO:0009167,GO:0009168,GO:0009259,GO:0009260,GO:0009987,GO:0016874,GO:0016879,GO:0016884,GO:0018130,GO:0019438,GO:0019637,GO:0019693,GO:0034404,GO:0034641,GO:0034654,GO:0042278,GO:0042451,GO:0042455,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0044283,GO:0046037,GO:0046128,GO:0046129,GO:0046390,GO:0046483,GO:0055086,GO:0071704,GO:0072521,GO:0072522,GO:0090407,GO:1901068,GO:1901070,GO:1901135,GO:1901137,GO:1901293,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576,GO:1901657,GO:1901659 6.3.5.2 1.071e-198 631.0
DYD1_k127_3506546_1 Catalyzes the formation of phosphatidylethanolamine (PtdEtn) from phosphatidylserine (PtdSer) K01613 - 4.1.1.65 0.00000000000000000000000000000000000000000000000000117 189.0
DYD1_k127_3506546_2 Belongs to the CDP-alcohol phosphatidyltransferase class-I family K17103 - 2.7.8.8 0.0000000000000000000000000000000000000000000000001934 189.0
DYD1_k127_3506546_3 PQQ enzyme repeat - - - 0.000000000000000000000000000001095 134.0
DYD1_k127_3506546_4 Glycoprotease family K01409,K14742 - 2.3.1.234 0.0000000000000000000001205 106.0
DYD1_k127_3506546_5 This enzyme acetylates the N-terminal alanine of ribosomal protein S18 K03789 - 2.3.1.128 0.00000000000000000004491 96.0
DYD1_k127_3506546_6 DNA polymerase III alpha subunit K02337 - 2.7.7.7 0.00000001201 57.0
DYD1_k127_3506546_7 Protein of unknown function (DUF465) - - - 0.0000001807 55.0
DYD1_k127_3506546_8 Tetratricopeptide TPR_2 repeat protein - - - 0.000006703 58.0
DYD1_k127_3507617_0 Belongs to the SIS family. GutQ KpsF subfamily K06041 - 5.3.1.13 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002991 421.0
DYD1_k127_3507617_1 PFAM response regulator receiver - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003952 308.0
DYD1_k127_3507617_10 DnaJ (Hsp40) homolog, subfamily C , member 25 K19371 - - 0.000000002867 67.0
DYD1_k127_3507617_11 D12 class N6 adenine-specific DNA methyltransferase K07318 - 2.1.1.72 0.00000003327 64.0
DYD1_k127_3507617_12 Lipid A core-O-antigen ligase-like enyme K18814 - - 0.0009344 46.0
DYD1_k127_3507617_2 His Kinase A (phosphoacceptor) domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007617 308.0
DYD1_k127_3507617_3 Catalyzes the hydrolysis of UDP-3-O-myristoyl-N- acetylglucosamine to form UDP-3-O-myristoylglucosamine and acetate, the committed step in lipid A biosynthesis K02535 - 3.5.1.108 0.000000000000000000000000000000000000000000000000000000000000000000000000000000002937 281.0
DYD1_k127_3507617_4 Belongs to the enoyl-CoA hydratase isomerase family K15866 - 5.3.3.18 0.0000000000000000000000000000000000000000000000000000000000000002683 232.0
DYD1_k127_3507617_5 Transmembrane secretion effector - - - 0.000000000000000000000000000000000000000000000000000003123 207.0
DYD1_k127_3507617_6 Protein of unknown function DUF47 K07220 - - 0.000000000000000000000000000000000000000000001344 172.0
DYD1_k127_3507617_7 HD domain - - - 0.0000000000000000000000000000000946 132.0
DYD1_k127_3507617_8 Probable zinc-ribbon domain - - - 0.00000000000000000000001805 104.0
DYD1_k127_3507617_9 PFAM phosphate transporter K03306 - - 0.000000000001938 68.0
DYD1_k127_3517317_0 carboxypeptidase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001092 576.0
DYD1_k127_3517317_1 Cytochrome P450 - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001346 368.0
DYD1_k127_3517317_2 PFAM oxidoreductase FAD NAD(P)-binding domain protein - - - 0.00000000000000000000000000000002015 136.0
DYD1_k127_3517956_0 FecR protein - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007963 472.0
DYD1_k127_3517956_1 AAA domain, putative AbiEii toxin, Type IV TA system K01990 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008627 425.0
DYD1_k127_3517956_2 ABC transporter K01990 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008695 421.0
DYD1_k127_3517956_3 - - - - 0.000000000000000000000000000000000000000000000000000000001527 211.0
DYD1_k127_3517956_4 COG0457 FOG TPR repeat - - - 0.00002868 55.0
DYD1_k127_3517956_5 ABC-type transport system involved in multi-copper enzyme maturation permease component K01992 - - 0.00003431 55.0
DYD1_k127_3518575_0 Phage shock protein A, PspA K03969 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000002961 256.0
DYD1_k127_3518575_1 NMT1-like family K02051 - - 0.0000000000000000000000000000000000000000000000000000000000000000779 242.0
DYD1_k127_3518575_2 Binding-protein-dependent transport system inner membrane component - - - 0.00000000000000000000000000000000000000000000000000000004488 205.0
DYD1_k127_3518575_3 Thecamonas trahens ATCC 50062 - - - 0.00002668 51.0
DYD1_k127_3524588_0 Carboxymethylenebutenolidase K01061 - 3.1.1.45 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004891 464.0
DYD1_k127_3524588_1 Aminotransferase class-V K01556 - 3.7.1.3 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002045 346.0
DYD1_k127_3524588_2 amino acid - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000005911 278.0
DYD1_k127_3524588_3 Belongs to the short-chain dehydrogenases reductases (SDR) family - - - 0.000000000000000000000000000000000000004527 156.0
DYD1_k127_3524588_4 Redoxin - - - 0.0000000000000000000000000000000001535 138.0
DYD1_k127_3524588_5 Could be a mediator in iron transactions between iron acquisition and iron-requiring processes, such as synthesis and or repair of Fe-S clusters in biosynthetic enzymes - - - 0.000000000000000000000009703 103.0
DYD1_k127_3524588_6 SMART Transport-associated and nodulation region K04065 - - 0.00000001782 63.0
DYD1_k127_3525305_0 COGs COG0577 ABC-type antimicrobial peptide transport system permease component K02004 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002276 349.0
DYD1_k127_3525305_1 ABC transporter K02003 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003079 338.0
DYD1_k127_3525305_10 Glyoxalase-like domain K06996 - - 0.000000000000000000000000000000000000000000000000000000005225 200.0
DYD1_k127_3525305_12 PFAM Forkhead-associated protein - - - 0.00000000000000000000003286 106.0
DYD1_k127_3525305_13 MacB-like periplasmic core domain K02004 - - 0.000000000000000000001502 99.0
DYD1_k127_3525305_14 RDD family - - - 0.00000006509 60.0
DYD1_k127_3525305_2 MacB-like periplasmic core domain K02004 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001692 332.0
DYD1_k127_3525305_3 Inner membrane component of T3SS, cytoplasmic domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000383 318.0
DYD1_k127_3525305_4 asparaginase K01424,K01444,K13051 GO:0005575,GO:0005623,GO:0042597,GO:0044464 3.4.19.5,3.5.1.1,3.5.1.26 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000007487 289.0
DYD1_k127_3525305_5 MacB-like periplasmic core domain K02004 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000002083 295.0
DYD1_k127_3525305_6 COG0515 Serine threonine protein K12132 - 2.7.11.1 0.00000000000000000000000000000000000000000000000000000000000000000000000000001164 272.0
DYD1_k127_3525305_7 DNA-templated transcription, initiation K03088 - - 0.0000000000000000000000000000000000000000000000000000000000192 215.0
DYD1_k127_3525305_8 PQQ-like domain K12132 - 2.7.11.1 0.00000000000000000000000000000000000000000000000000000000005968 226.0
DYD1_k127_3525305_9 Biotin-lipoyl like K02005 - - 0.000000000000000000000000000000000000000000000000000000001733 219.0
DYD1_k127_3567664_0 FAD dependent oxidoreductase K03153 - 1.4.3.19 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000009199 289.0
DYD1_k127_3567664_1 Isocitrate/isopropylmalate dehydrogenase K00030 - 1.1.1.41 0.0000000000000000000000003254 115.0
DYD1_k127_3584444_0 Vitamin B12 dependent methionine synthase, activation domain K00548 GO:0000096,GO:0000097,GO:0003674,GO:0003824,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006082,GO:0006520,GO:0006555,GO:0006790,GO:0006807,GO:0008150,GO:0008152,GO:0008168,GO:0008172,GO:0008652,GO:0008705,GO:0009058,GO:0009066,GO:0009067,GO:0009086,GO:0009987,GO:0016053,GO:0016740,GO:0016741,GO:0019752,GO:0032259,GO:0042084,GO:0043436,GO:0044237,GO:0044238,GO:0044249,GO:0044272,GO:0044281,GO:0044283,GO:0044424,GO:0044444,GO:0044464,GO:0046394,GO:0071704,GO:1901564,GO:1901566,GO:1901576,GO:1901605,GO:1901607 2.1.1.13 1.28e-255 816.0
DYD1_k127_3584444_1 F5/8 type C domain - - - 0.00000000000000000000000000000000000000002064 163.0
DYD1_k127_3584444_2 COG2826 Transposase and inactivated derivatives, IS30 family - - - 0.00000000000000000000000000000000003153 143.0
DYD1_k127_3591457_0 MacB-like periplasmic core domain K02004 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000004477 268.0
DYD1_k127_3591457_1 Yip1 domain - - - 0.0000005662 60.0
DYD1_k127_3608227_0 Protein of unknown function (DUF2911) - - - 0.0000000000000000000000000000000000000000000000005764 188.0
DYD1_k127_3608227_1 triphosphatase activity - - - 0.00000000000000000000000004968 114.0
DYD1_k127_3608227_2 Protein of unknown function (DUF3298) - - - 0.00000000000000000000005938 112.0
DYD1_k127_3613438_0 Catalyzes the condensation reaction of fatty acid synthesis by the addition to an acyl acceptor of two carbons from malonyl-ACP K09458 - 2.3.1.179 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003154 539.0
DYD1_k127_3613438_1 Catalyzes the condensation reaction of fatty acid synthesis by the addition to an acyl acceptor of two carbons from malonyl-ACP. Catalyzes the first condensation reaction which initiates fatty acid synthesis and may therefore play a role in governing the total rate of fatty acid production. Possesses both acetoacetyl-ACP synthase and acetyl transacylase activities. Its substrate specificity determines the biosynthesis of branched- chain and or straight-chain of fatty acids K00648 - 2.3.1.180 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009019 369.0
DYD1_k127_3613438_2 Catalyzes the reversible formation of acyl-phosphate (acyl-PO(4)) from acyl- acyl-carrier-protein (acyl-ACP). This enzyme utilizes acyl-ACP as fatty acyl donor, but not acyl-CoA K03621 - 2.3.1.15 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001003 359.0
DYD1_k127_3613438_3 TIGRFAM malonyl CoA-acyl carrier protein transacylase K00645 - 2.3.1.39 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004596 317.0
DYD1_k127_3613438_4 Electron transfer flavoprotein domain K03521 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000005456 276.0
DYD1_k127_3613438_5 Periplasmic binding protein domain - - - 0.00000000000000000000000000000000000000000000000001977 184.0
DYD1_k127_3613438_6 Electron transfer flavoprotein FAD-binding domain K03522 - - 0.000000000000000000000000000000000000000000003174 171.0
DYD1_k127_3613438_7 acr, cog1399 K07040 - - 0.0000000000000000000000000008333 119.0
DYD1_k127_3613438_8 Carrier of the growing fatty acid chain in fatty acid biosynthesis K02078 - - 0.00000000000000000000000002129 110.0
DYD1_k127_3613438_9 Ribosomal L32p protein family K02911 - - 0.000000000000000000005543 93.0
DYD1_k127_3646404_0 UPF0210 protein K09157 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003338 556.0
DYD1_k127_3646404_1 TIGRFAM acetaldehyde dehydrogenase (acetylating) K00132 - 1.2.1.10 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003866 454.0
DYD1_k127_3646404_2 von Willebrand factor, type A - - - 0.00000000000000000000000000000000000000000000000006299 193.0
DYD1_k127_3646404_3 Low affinity iron permease - - - 0.000000000000000000000000000000000000000000000001699 181.0
DYD1_k127_3646404_4 von Willebrand factor (vWF) type A domain K07114 - - 0.0000000000000000000000000000001401 128.0
DYD1_k127_3646404_5 BMC - - - 0.000000000000000000000000000004446 122.0
DYD1_k127_3646404_6 ethanolamine utilization protein EutN carboxysome structural protein Ccml K04028 - - 0.000000000000000000000000002242 113.0
DYD1_k127_3646404_7 Belongs to the UPF0237 family K07166 - - 0.00000000000000006981 90.0
DYD1_k127_3649295_0 Zinc carboxypeptidase - - - 1.137e-216 697.0
DYD1_k127_3649295_1 ABC1 family - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002658 365.0
DYD1_k127_3649295_2 Metallo-beta-lactamase superfamily K06167 - 3.1.4.55 0.000000000000000000000000000000000000000000000000000000000000000000000000000794 262.0
DYD1_k127_3649295_3 iron-nicotianamine transmembrane transporter activity - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000004604 259.0
DYD1_k127_3649295_4 MazG family K02499,K04765 GO:0003674,GO:0003824,GO:0006139,GO:0006163,GO:0006195,GO:0006203,GO:0006213,GO:0006220,GO:0006244,GO:0006725,GO:0006753,GO:0006793,GO:0006796,GO:0006807,GO:0006950,GO:0007154,GO:0008150,GO:0008152,GO:0009056,GO:0009058,GO:0009116,GO:0009117,GO:0009119,GO:0009141,GO:0009143,GO:0009144,GO:0009146,GO:0009147,GO:0009149,GO:0009151,GO:0009155,GO:0009164,GO:0009166,GO:0009199,GO:0009200,GO:0009203,GO:0009204,GO:0009208,GO:0009210,GO:0009211,GO:0009213,GO:0009215,GO:0009217,GO:0009218,GO:0009219,GO:0009222,GO:0009223,GO:0009259,GO:0009261,GO:0009262,GO:0009264,GO:0009267,GO:0009394,GO:0009605,GO:0009987,GO:0009991,GO:0016462,GO:0016787,GO:0016817,GO:0016818,GO:0018130,GO:0019438,GO:0019439,GO:0019637,GO:0019692,GO:0019693,GO:0031667,GO:0031668,GO:0031669,GO:0033554,GO:0034404,GO:0034641,GO:0034654,GO:0034655,GO:0034656,GO:0042454,GO:0042594,GO:0044237,GO:0044238,GO:0044248,GO:0044249,GO:0044270,GO:0044271,GO:0044281,GO:0044282,GO:0044283,GO:0046046,GO:0046047,GO:0046051,GO:0046052,GO:0046060,GO:0046061,GO:0046070,GO:0046075,GO:0046076,GO:0046080,GO:0046081,GO:0046131,GO:0046133,GO:0046135,GO:0046386,GO:0046434,GO:0046483,GO:0046700,GO:0047429,GO:0050896,GO:0051716,GO:0055086,GO:0071496,GO:0071704,GO:0072521,GO:0072523,GO:0072527,GO:0072529,GO:1901135,GO:1901136,GO:1901292,GO:1901360,GO:1901361,GO:1901362,GO:1901564,GO:1901565,GO:1901575,GO:1901576,GO:1901657,GO:1901658 3.6.1.9 0.0000000000000000000000000000000000000000000000000000000000000000000001927 247.0
DYD1_k127_3649295_5 Belongs to the ribF family K11753 - 2.7.1.26,2.7.7.2 0.00000000000000000000000000000000000000000000000000000000000000001163 236.0
DYD1_k127_3649295_6 Domain of unknown function (DUF1844) - - - 0.00000000001952 73.0
DYD1_k127_3665201_0 Catalyzes the oxidation of L-aspartate to iminoaspartate K00278 - 1.4.3.16 1.737e-249 781.0
DYD1_k127_3665201_1 tRNA-splicing ligase RtcB K14415 - 6.5.1.3 3.446e-222 696.0
DYD1_k127_3665201_10 Probable RNA and SrmB- binding site of polymerase A K00974 - 2.7.7.72 0.00000000000000000000000000000000000000000000000000000000843 201.0
DYD1_k127_3665201_11 PFAM Nickel cobalt transporter, high-affinity - - - 0.000000000000000000000000000000000000000000000009919 178.0
DYD1_k127_3665201_12 Chloramphenicol acetyltransferase K19271 - 2.3.1.28 0.00000000000000000000000000000000000000000000002358 178.0
DYD1_k127_3665201_13 Polyketide cyclase / dehydrase and lipid transport - - - 0.00000000000000000000000000000000000000003489 160.0
DYD1_k127_3665201_14 Domain in cystathionine beta-synthase and other proteins. - - - 0.0000000000000000000000000000000000007974 144.0
DYD1_k127_3665201_2 NHL repeat - - - 6.07e-197 635.0
DYD1_k127_3665201_3 Catalyzes the condensation of iminoaspartate with dihydroxyacetone phosphate to form quinolinate K03517 - 2.5.1.72 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002174 526.0
DYD1_k127_3665201_4 Involved in the biosynthesis of the central metabolite phospho-alpha-D-ribosyl-1-pyrophosphate (PRPP) via the transfer of pyrophosphoryl group from ATP to 1-hydroxyl of ribose-5-phosphate (Rib-5-P) K00948 - 2.7.6.1 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001279 400.0
DYD1_k127_3665201_5 Belongs to the NadC ModD family K00767 - 2.4.2.19 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003889 365.0
DYD1_k127_3665201_6 Dienelactone hydrolase family - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000009956 284.0
DYD1_k127_3665201_7 PFAM Phosphoribosyl transferase domain K07100 - - 0.000000000000000000000000000000000000000000000000000000000000000000000002462 250.0
DYD1_k127_3665201_8 - - - - 0.000000000000000000000000000000000000000000000000000000000000001759 224.0
DYD1_k127_3665201_9 BON domain K04065 - - 0.000000000000000000000000000000000000000000000000000000000000009877 226.0
DYD1_k127_3678619_0 serine-type exopeptidase activity K01322 GO:0005575,GO:0005623,GO:0042597,GO:0044464 3.4.21.26 1.019e-311 970.0
DYD1_k127_3678619_1 Aminotransferase class-III K00823 - 2.6.1.19 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002071 459.0
DYD1_k127_3678619_2 Glycosyl hydrolase family 47 K01230 - 3.2.1.113 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006075 365.0
DYD1_k127_3680532_0 amine dehydrogenase activity - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007812 411.0
DYD1_k127_3680532_1 LVIVD repeat - - - 0.000000000000000000000000000000000000000000000000000000000000000000009913 241.0
DYD1_k127_3680532_2 LVIVD repeat - - - 0.00000000000000000000000000000000000000000000001306 186.0
DYD1_k127_3680532_3 PFAM peptidase M15B and M15C DD-carboxypeptidase VanY endolysin - - - 0.0000000000000000000000000007266 125.0
DYD1_k127_3680532_4 COG0526 Thiol-disulfide isomerase and thioredoxins - - - 0.00000000000000008929 89.0
DYD1_k127_3680532_5 - - - - 0.00001502 56.0
DYD1_k127_3784330_0 Catalyzes the formation of the alpha-1,6-glucosidic linkages in glycogen by scission of a 1,4-alpha-linked oligosaccharide from growing alpha-1,4-glucan chains and the subsequent attachment of the oligosaccharide to the alpha-1,6 position K00700 - 2.4.1.18 3.962e-233 734.0
DYD1_k127_3784330_1 Domain of unknown function (DUF3536) - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001496 519.0
DYD1_k127_3784330_2 transcriptional regulator sugar kinase K00845 - 2.7.1.2 0.00000000000000000000000000000000000000000000000000000000000000002128 235.0
DYD1_k127_379276_0 Tetratricopeptide repeat - - - 0.0000000000000000000000000000000000000000000000000000000000000000004613 256.0
DYD1_k127_379276_1 eight transmembrane protein EpsH - - - 0.00000000000000000000000000000000000000000000000000000000000000003017 235.0
DYD1_k127_379276_2 ATP hydrolysis coupled proton transport K02123 GO:0005575,GO:0005623,GO:0005886,GO:0016020,GO:0044464,GO:0071944 - 0.0000000000000000000000000000000000000004339 157.0
DYD1_k127_380710_0 Lipid A core-O-antigen ligase-like enyme K18814 - - 0.00000000000000003768 92.0
DYD1_k127_380710_1 PFAM TPR repeat-containing protein - - - 0.0004289 50.0
DYD1_k127_3809772_0 Belongs to the BshC family K22136 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002166 322.0
DYD1_k127_3809772_1 - - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000002778 304.0
DYD1_k127_3809772_2 Belongs to the DapA family K01714,K22397 GO:0003674,GO:0003824,GO:0005488,GO:0005515,GO:0005975,GO:0006082,GO:0008150,GO:0008152,GO:0009056,GO:0009987,GO:0016052,GO:0016054,GO:0016829,GO:0016830,GO:0016832,GO:0019520,GO:0019752,GO:0032787,GO:0042802,GO:0043436,GO:0044237,GO:0044238,GO:0044248,GO:0044262,GO:0044275,GO:0044281,GO:0044282,GO:0046176,GO:0046395,GO:0047440,GO:0071704,GO:0072329,GO:1901575 4.1.2.28,4.3.3.7 0.00000000000000000000000000000000000000000003007 167.0
DYD1_k127_3814896_0 Master enzyme that delivers sulfur to a number of partners involved in Fe-S cluster assembly, tRNA modification or cofactor biosynthesis. Catalyzes the removal of elemental sulfur atoms from cysteine to produce alanine. Functions as a sulfur delivery protein for Fe-S cluster synthesis onto IscU, an Fe-S scaffold assembly protein, as well as other S acceptor proteins K04487 - 2.8.1.7 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002707 422.0
DYD1_k127_3814896_1 Peptidoglycan polymerase that catalyzes glycan chain elongation from lipid-linked precursors K03814,K05365 - 2.4.1.129,3.4.16.4 0.0000000000000000000000000000000001026 143.0
DYD1_k127_3814896_2 May be involved in the formation or repair of Fe-S clusters present in iron-sulfur proteins K13819 - - 0.0000000000000000000000196 104.0
DYD1_k127_3814896_3 multi-organism process - - - 0.0001331 52.0
DYD1_k127_3875472_0 retrograde transport, endosome to plasma membrane K21440 GO:0006810,GO:0008150,GO:0016192,GO:0016197,GO:0046907,GO:0051179,GO:0051234,GO:0051641,GO:0051649,GO:0098876,GO:1990126 - 0.00000000000393 74.0
DYD1_k127_3875472_1 Psort location OuterMembrane, score 9.92 K01991 - - 0.000000151 63.0
DYD1_k127_387559_0 3-hydroxyacyl-CoA dehydrogenase K07516 - 1.1.1.35 9.323e-210 668.0
DYD1_k127_387559_1 Acyl-CoA dehydrogenase, C-terminal domain K00248 - 1.3.8.1 2.059e-201 643.0
DYD1_k127_387559_2 Thiolase, C-terminal domain K00632 - 2.3.1.16 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001667 526.0
DYD1_k127_387559_3 Polysaccharide biosynthesis protein K01784 - 5.1.3.2 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004016 446.0
DYD1_k127_387559_4 Biopterin-dependent aromatic amino acid hydroxylase K00500 - 1.14.16.1 0.00000000000000000000000000000000000000000000000000000000000000000000000000000003447 276.0
DYD1_k127_387559_5 DNA ligase K01971 - 6.5.1.1 0.0000000000000000000000000000000000000000000000000000000000000000000000001549 258.0
DYD1_k127_387559_6 Zn-dependent hydrolase, glyoxylase - - - 0.00000000000000000000000000000000000000000000000000000001845 209.0
DYD1_k127_387559_7 PDZ DHR GLGF domain protein - - - 0.000000000000000000000000000000002948 141.0
DYD1_k127_387559_8 C4-type zinc ribbon domain K07164 - - 0.00000000000000000323 94.0
DYD1_k127_387559_9 YceI-like domain - - - 0.00000000000000001718 91.0
DYD1_k127_3876000_0 Belongs to the argininosuccinate synthase family. Type 1 subfamily K01940 - 6.3.4.5 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005083 574.0
DYD1_k127_3876000_1 argininosuccinate lyase K01755,K14681 GO:0003674,GO:0003824,GO:0004056,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006082,GO:0006520,GO:0006525,GO:0006526,GO:0006591,GO:0006807,GO:0008150,GO:0008152,GO:0008652,GO:0009058,GO:0009064,GO:0009084,GO:0009987,GO:0016053,GO:0016829,GO:0016840,GO:0016842,GO:0019752,GO:0042450,GO:0043436,GO:0044237,GO:0044238,GO:0044249,GO:0044281,GO:0044283,GO:0044424,GO:0044464,GO:0046394,GO:0071704,GO:1901564,GO:1901566,GO:1901576,GO:1901605,GO:1901607 2.3.1.1,4.3.2.1 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005498 493.0
DYD1_k127_3876000_2 Receptor family ligand binding region K01999 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005391 374.0
DYD1_k127_3876000_3 Branched-chain amino acid transport system / permease component K01995,K01998 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008594 321.0
DYD1_k127_3876000_4 PFAM ABC transporter related K01995 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000101 317.0
DYD1_k127_3876000_5 Psort location CytoplasmicMembrane, score 9.49 K01996 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000001802 300.0
DYD1_k127_3876000_6 Mo-molybdopterin cofactor biosynthetic process - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000006392 278.0
DYD1_k127_3876000_7 Regulates arginine biosynthesis genes K03402 - - 0.0000000000000000000005846 100.0
DYD1_k127_3876000_8 Catalyzes the NADPH-dependent reduction of N-acetyl-5- glutamyl phosphate to yield N-acetyl-L-glutamate 5-semialdehyde K00145 - 1.2.1.38 0.0000000000000003526 80.0
DYD1_k127_3876795_0 ABC-2 type transporter K09690 - - 0.0000000000000000000000000000000000000000000000000000000000000006033 224.0
DYD1_k127_3876795_1 Capsular exopolysaccharide family - - - 0.0000000000000000000000000000000000000000000001991 173.0
DYD1_k127_3876795_2 Chain length determinant protein K16554 - - 0.000000000000000000000000000000244 141.0
DYD1_k127_3884486_0 aldehyde oxidase and xanthine dehydrogenase, a b hammerhead K03520 - 1.2.5.3 7.953e-295 921.0
DYD1_k127_3884486_1 Radical SAM superfamily K04069 - 1.97.1.4 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002348 486.0
DYD1_k127_3884486_2 amidohydrolase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000023 368.0
DYD1_k127_3884486_3 4Fe-4S double cluster binding domain K18979 - 1.17.99.6 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001256 345.0
DYD1_k127_3884486_4 Catalyzes the cyclization of GTP to (8S)-3',8-cyclo-7,8- dihydroguanosine 5'-triphosphate K03639 - 4.1.99.22 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003424 336.0
DYD1_k127_3884486_5 Putative restriction endonuclease - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000006566 271.0
DYD1_k127_3884486_6 COG0491 Zn-dependent hydrolases, including glyoxylases - - - 0.000000000000000000000000000000000000000000000000000000000495 211.0
DYD1_k127_3884486_7 protein, possibly involved in aromatic compounds catabolism - - - 0.000000000000000000000000000000000000000000349 162.0
DYD1_k127_3884486_8 SnoaL-like domain - - - 0.000001146 57.0
DYD1_k127_3890275_0 Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family K03296,K18138 - - 0.0 1364.0
DYD1_k127_3890275_1 D-isomer specific 2-hydroxyacid dehydrogenase K00058 - 1.1.1.399,1.1.1.95 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007181 412.0
DYD1_k127_3890275_2 Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family K03585,K07799 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005059 390.0
DYD1_k127_3890325_0 DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates K03046 - 2.7.7.6 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001356 501.0
DYD1_k127_3890325_1 DNA ligase K01971 - 6.5.1.1 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002924 319.0
DYD1_k127_3890325_2 Specifically methylates the N7 position of guanine in position 527 of 16S rRNA K03501 GO:0000154,GO:0001510,GO:0003674,GO:0003824,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006139,GO:0006364,GO:0006396,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0008168,GO:0008170,GO:0008173,GO:0008649,GO:0008757,GO:0009451,GO:0009987,GO:0010467,GO:0016070,GO:0016072,GO:0016435,GO:0016740,GO:0016741,GO:0022613,GO:0031167,GO:0032259,GO:0034470,GO:0034641,GO:0034660,GO:0036265,GO:0042254,GO:0043170,GO:0043412,GO:0043414,GO:0044085,GO:0044237,GO:0044238,GO:0044260,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0070043,GO:0070475,GO:0070476,GO:0071704,GO:0071840,GO:0090304,GO:0140098,GO:0140102,GO:1901360 2.1.1.170 0.0000000000000001937 85.0
DYD1_k127_3900379_0 HELICc2 K03722 - 3.6.4.12 2.631e-197 634.0
DYD1_k127_3900379_1 Catalyzes the reversible interconversion of serine and glycine with tetrahydrofolate (THF) serving as the one-carbon carrier. This reaction serves as the major source of one-carbon groups required for the biosynthesis of purines, thymidylate, methionine, and other important biomolecules. Also exhibits THF- independent aldolase activity toward beta-hydroxyamino acids, producing glycine and aldehydes, via a retro-aldol mechanism K00600 - 2.1.2.1 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009156 565.0
DYD1_k127_3900379_2 Peptidase family M28 - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009323 476.0
DYD1_k127_3900379_3 Aminoacyl-tRNA editing domain K01881 GO:0005575,GO:0005618,GO:0005623,GO:0005886,GO:0008150,GO:0016020,GO:0030312,GO:0040007,GO:0044464,GO:0071944 6.1.1.15 0.0000000000000000000000000000000000000000000000002513 178.0
DYD1_k127_3900379_4 Ribose/Galactose Isomerase K01808 - 5.3.1.6 0.00000000000000000000000000000000000000000002601 166.0
DYD1_k127_3900379_5 PIN domain - - - 0.000000000000000000000000000000000009566 139.0
DYD1_k127_3900379_6 6-pyruvoyl tetrahydropterin synthase K01737 - 4.1.2.50,4.2.3.12 0.0000000000000000000000000000000008615 134.0
DYD1_k127_3900379_7 Signal peptidase I K03100 - 3.4.21.89 0.0000000000000000000000007711 113.0
DYD1_k127_3900379_8 Acyltransferase family - - - 0.00003118 55.0
DYD1_k127_392221_0 Bidirectionally degrades single-stranded DNA into large acid-insoluble oligonucleotides, which are then degraded further into small acid-soluble oligonucleotides K03601,K03797 - 3.1.11.6,3.4.21.102 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001491 347.0
DYD1_k127_392221_1 Belongs to the FPP GGPP synthase family K00795,K13789 - 2.5.1.1,2.5.1.10,2.5.1.29 0.00000000000000000000000000000000000000000000000000000003704 204.0
DYD1_k127_392221_2 Bidirectionally degrades single-stranded DNA into large acid-insoluble oligonucleotides, which are then degraded further into small acid-soluble oligonucleotides K03602 - 3.1.11.6 0.00000000000004579 76.0
DYD1_k127_3939628_0 O-acyltransferase activity - - - 0.000000000000000000000000000000000000000000000000000000000000000000000007622 251.0
DYD1_k127_3939628_1 Pyrophosphatase that catalyzes the hydrolysis of nucleoside triphosphates to their monophosphate derivatives, with a high preference for the non-canonical purine nucleotides XTP (xanthosine triphosphate), dITP (deoxyinosine triphosphate) and ITP. Seems to function as a house-cleaning enzyme that removes non-canonical purine nucleotides from the nucleotide pool, thus preventing their incorporation into DNA RNA and avoiding chromosomal lesions K02428 - 3.6.1.66 0.0000000000000000000000000000000000000000000000000008196 190.0
DYD1_k127_3954619_0 Penicillin-binding protein 1A K05366 - 2.4.1.129,3.4.16.4 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001817 528.0
DYD1_k127_3954619_1 Phosphorolytic exoribonuclease that removes nucleotide residues following the -CCA terminus of tRNA and adds nucleotides to the ends of RNA molecules by using nucleoside diphosphates as substrates K00989 - 2.7.7.56 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000007453 299.0
DYD1_k127_3954619_2 esterase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000001008 296.0
DYD1_k127_3954619_3 Provides the (R)-glutamate required for cell wall biosynthesis K01776 - 5.1.1.3 0.0000000000000000000000000000000000000000000000000000000000000000000000000000002365 273.0
DYD1_k127_3954619_4 protein conserved in cyanobacteria - - - 0.000000000000000000000000000000000001095 145.0
DYD1_k127_3954619_5 Recombinase zinc beta ribbon domain - - - 0.0000000001942 63.0
DYD1_k127_3969820_0 Ion channel K10716 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000002677 259.0
DYD1_k127_3969820_1 Glycosyltransferase family 9 (heptosyltransferase) K02843 - - 0.000000000000000000000000000000000000000000000000000000000000000000000003438 256.0
DYD1_k127_3969820_2 Transglycosylase K05365 - 2.4.1.129,3.4.16.4 0.00000000000000000000000000000000000000000000000000000000000000002843 238.0
DYD1_k127_3969820_3 Polysaccharide biosynthesis protein K12454 - 5.1.3.10 0.0000000000000000000000000008651 123.0
DYD1_k127_3980558_0 FGGY family of carbohydrate kinases, N-terminal domain K00854 - 2.7.1.17 2.399e-210 664.0
DYD1_k127_3980558_1 ABC-type sugar transport system periplasmic component K10439 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003148 409.0
DYD1_k127_3980558_2 PQQ-like domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002083 357.0
DYD1_k127_3980558_3 Chlorophyllase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000104 299.0
DYD1_k127_3980558_4 ATPases associated with a variety of cellular activities - - - 0.000000000000000000000000000000000000000000000000000000000000002173 224.0
DYD1_k127_3980558_6 Copper/zinc superoxide dismutase (SODC) K04565 - 1.15.1.1 0.0000000000000000000000000000000000000000000001745 175.0
DYD1_k127_3980558_7 Transcriptional regulator - - - 0.000000000000000000000000000000000000000000002668 173.0
DYD1_k127_3980558_8 - - - - 0.00000000000000000000000000000000000000212 151.0
DYD1_k127_3980558_9 electron transfer activity - - - 0.00000003801 58.0
DYD1_k127_4000010_0 NeuB family K03856 - 2.5.1.54 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006083 463.0
DYD1_k127_4000010_1 Domain of Unknown Function with PDB structure (DUF3857) - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001029 331.0
DYD1_k127_4000010_2 arogenate dehydratase activity K05359,K20102 GO:0003674,GO:0003824,GO:0004664,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006082,GO:0006520,GO:0006558,GO:0006570,GO:0006571,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0008652,GO:0009058,GO:0009072,GO:0009073,GO:0009094,GO:0009095,GO:0009314,GO:0009416,GO:0009507,GO:0009536,GO:0009628,GO:0009637,GO:0009642,GO:0009645,GO:0009987,GO:0010244,GO:0016053,GO:0016829,GO:0016835,GO:0016836,GO:0017144,GO:0019438,GO:0019752,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0043436,GO:0044237,GO:0044238,GO:0044249,GO:0044281,GO:0044283,GO:0044424,GO:0044444,GO:0044464,GO:0046394,GO:0047769,GO:0050896,GO:0071704,GO:0080167,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576,GO:1901605,GO:1901607,GO:1902221,GO:1902223 4.2.1.51,4.2.1.91 0.000000000000000000000000000000000000002318 153.0
DYD1_k127_4000010_3 Chorismate mutase K03856,K04092,K04093,K04516,K13853 - 2.5.1.54,5.4.99.5 0.000000000000003865 81.0
DYD1_k127_4000010_4 Glycosyl hydrolase family 9 K01179 - 3.2.1.4 0.000000007509 60.0
DYD1_k127_4000010_5 Glycosyl hydrolase family 9 K01179 - 3.2.1.4 0.00000000945 62.0
DYD1_k127_4000010_6 Glycosyl hydrolase family 9 K01179 - 3.2.1.4 0.00009894 49.0
DYD1_k127_4000010_7 Glycosyl hydrolase family 9 K01179 - 3.2.1.4 0.0006574 46.0
DYD1_k127_4006409_0 Biotin carboxylase K01959,K01961 - 6.3.4.14,6.4.1.1,6.4.1.2 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001087 583.0
DYD1_k127_4006409_1 DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates K03040 - 2.7.7.6 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004661 470.0
DYD1_k127_4006409_10 Belongs to the bacterial ribosomal protein bL27 family K02899 - - 0.000000000000000000000000000000000921 131.0
DYD1_k127_4006409_11 One of the essential components for the initiation of protein synthesis. Stabilizes the binding of IF-2 and IF-3 on the 30S subunit to which N-formylmethionyl-tRNA(fMet) subsequently binds. Helps modulate mRNA selection, yielding the 30S pre- initiation complex (PIC). Upon addition of the 50S ribosomal subunit IF-1, IF-2 and IF-3 are released leaving the mature 70S translation initation complex K02518 - - 0.00000000000000000000000000000006077 125.0
DYD1_k127_4006409_12 Functions as a ribosomal silencing factor. Interacts with ribosomal protein L14 (rplN), blocking formation of intersubunit bridge B8. Prevents association of the 30S and 50S ribosomal subunits and the formation of functional ribosomes, thus repressing translation K09710 - - 0.00000000000000000000000000000008961 130.0
DYD1_k127_4006409_13 Ribosomal protein L17 K02879 GO:0003674,GO:0003735,GO:0005198,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0015934,GO:0022625,GO:0022626,GO:0032991,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:1990904 - 0.0000000000000000000000000003445 121.0
DYD1_k127_4006409_14 This protein binds to 23S rRNA in the presence of protein L20 K02888 GO:0003674,GO:0003735,GO:0005198 - 0.000000000000000000001757 96.0
DYD1_k127_4006409_15 Belongs to the bacterial ribosomal protein bL36 family K02919 - - 0.00000000000000931 74.0
DYD1_k127_4006409_2 An essential GTPase which binds GTP, GDP and possibly (p)ppGpp with moderate affinity, with high nucleotide exchange rates and a fairly low GTP hydrolysis rate. Plays a role in control of the cell cycle, stress response, ribosome biogenesis and in those bacteria that undergo differentiation, in morphogenesis control K03979 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003856 415.0
DYD1_k127_4006409_3 TIGRFAM methionine aminopeptidase, type I K01265 - 3.4.11.18 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000001182 291.0
DYD1_k127_4006409_4 PFAM Response regulator receiver domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000837 291.0
DYD1_k127_4006409_5 One of the primary rRNA binding proteins, it binds directly to 16S rRNA where it nucleates assembly of the body of the 30S subunit K02986 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000002333 252.0
DYD1_k127_4006409_6 Located at the top of the head of the 30S subunit, it contacts several helices of the 16S rRNA. In the 70S ribosome it contacts the 23S rRNA (bridge B1a) and protein L5 of the 50S subunit (bridge B1b), connecting the 2 subunits K02952 - - 0.00000000000000000000000000000000000000000000000001845 182.0
DYD1_k127_4006409_7 Located on the platform of the 30S subunit, it bridges several disparate RNA helices of the 16S rRNA. Forms part of the Shine-Dalgarno cleft in the 70S ribosome K02948 GO:0000028,GO:0000462,GO:0003674,GO:0003676,GO:0003723,GO:0003729,GO:0003735,GO:0005198,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0005886,GO:0006139,GO:0006364,GO:0006396,GO:0006412,GO:0006518,GO:0006725,GO:0006807,GO:0006996,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0015935,GO:0016020,GO:0016043,GO:0016070,GO:0016072,GO:0019538,GO:0019843,GO:0022607,GO:0022613,GO:0022618,GO:0022626,GO:0022627,GO:0030490,GO:0032991,GO:0034470,GO:0034622,GO:0034641,GO:0034645,GO:0034660,GO:0040007,GO:0042254,GO:0042255,GO:0042274,GO:0043043,GO:0043170,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043603,GO:0043604,GO:0043933,GO:0044085,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:0046483,GO:0048027,GO:0065003,GO:0070181,GO:0070925,GO:0071704,GO:0071826,GO:0071840,GO:0071944,GO:0090304,GO:0097159,GO:1901360,GO:1901363,GO:1901564,GO:1901566,GO:1901576,GO:1990904 - 0.00000000000000000000000000000000000000000000004317 172.0
DYD1_k127_4006409_8 Catalyzes the reversible adenylation of nicotinate mononucleotide (NaMN) to nicotinic acid adenine dinucleotide (NaAD) K00969 - 2.7.7.18 0.0000000000000000000000000000000000000000003132 165.0
DYD1_k127_4006409_9 first, biotin carboxylase catalyzes the carboxylation of the carrier protein and then the transcarboxylase transfers the carboxyl group to form malonyl-CoA K02160 - - 0.000000000000000000000000000000000000001745 153.0
DYD1_k127_4006565_0 Carboxyl transferase domain - - - 2.483e-234 738.0
DYD1_k127_4006565_1 Zn peptidase - - - 0.000000000000000004335 89.0
DYD1_k127_4006920_0 N-acetyldiaminopimelate deacetylase activity K12941 - - 1.619e-235 742.0
DYD1_k127_4006920_1 Carboxypeptidase regulatory-like domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003024 612.0
DYD1_k127_4006920_2 Transporter-associated region K03699 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003077 511.0
DYD1_k127_4006920_3 PFAM phospholipase Carboxylesterase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000787 271.0
DYD1_k127_4006920_4 Domain of unknown function (DU1801) - - - 0.000000000000000000000000000000000000000000001887 170.0
DYD1_k127_4006920_5 DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates K03046 - 2.7.7.6 0.0000000000000000000002082 98.0
DYD1_k127_400799_0 Molybdopterin oxidoreductase Fe4S4 domain - - - 0.0 1422.0
DYD1_k127_400799_1 Proton pump that utilizes the energy of pyrophosphate hydrolysis as the driving force for proton movement across the membrane. Generates a proton motive force K15987 - 3.6.1.1 0.0 1206.0
DYD1_k127_400799_10 Catalyzes the removal of elemental sulfur atoms from cysteine to produce alanine K04487 - 2.8.1.7 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001779 412.0
DYD1_k127_400799_11 Sodium/hydrogen exchanger family - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001564 391.0
DYD1_k127_400799_12 Binds and transfers iron-sulfur (Fe-S) clusters to target apoproteins. Can hydrolyze ATP K03593 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009595 349.0
DYD1_k127_400799_13 electron transfer activity K00428 GO:0005575,GO:0005623,GO:0042597,GO:0044464 1.11.1.5 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000005217 299.0
DYD1_k127_400799_14 Iron/manganese superoxide dismutases, C-terminal domain K04564 - 1.15.1.1 0.00000000000000000000000000000000000000000000000000000000000000003488 230.0
DYD1_k127_400799_15 Metallophosphoesterase K07098 - - 0.00000000000000000000000000000000000000000000000000000448 203.0
DYD1_k127_400799_16 FR47-like protein - - - 0.000000000000000000000000000000000000000000006871 169.0
DYD1_k127_400799_17 Glycine cleavage T-protein C-terminal barrel domain K00605,K06980 - 2.1.2.10 0.00000000000000000000000000000000000000000003757 173.0
DYD1_k127_400799_18 BioY family K03523 - - 0.000000000000000000000000000000000000000001893 162.0
DYD1_k127_400799_19 protein conserved in cyanobacteria - - - 0.000000000000000000000000000000000000000003177 162.0
DYD1_k127_400799_2 Oxidoreductase required for the transfer of electrons from pyruvate to flavodoxin K00174 GO:0003674,GO:0003824,GO:0005575,GO:0005618,GO:0005623,GO:0005886,GO:0006950,GO:0006979,GO:0008150,GO:0008152,GO:0016020,GO:0016491,GO:0030312,GO:0044464,GO:0050896,GO:0055114,GO:0071944 1.2.7.11,1.2.7.3 6.374e-256 802.0
DYD1_k127_400799_20 2Fe-2S iron-sulfur cluster binding domain - - - 0.0000000000000000000000000000000000003245 143.0
DYD1_k127_400799_21 PFAM Uncharacterised protein family UPF0047 - - - 0.000000000000000000000000000000000001085 144.0
DYD1_k127_400799_22 deaminated base DNA N-glycosylase activity K21929 - 3.2.2.27 0.000000000000000000000000000000000002818 144.0
DYD1_k127_400799_23 Urate oxidase N-terminal - - - 0.000000000000000000000000000000000009683 146.0
DYD1_k127_400799_24 PFAM nitrogen-fixing NifU domain protein K04488 - - 0.00000000000000000000000000000000007565 140.0
DYD1_k127_400799_25 PFAM von Willebrand factor type A - - - 0.000000000000000000000000000000002562 146.0
DYD1_k127_400799_26 Iron-sulphur cluster biosynthesis - - - 0.00000000000000000000000000000001373 129.0
DYD1_k127_400799_27 Universal stress protein - - - 0.0000000000000002797 90.0
DYD1_k127_400799_28 PFAM Metallo-beta-lactamase superfamily K01069 - 3.1.2.6 0.000000000004321 70.0
DYD1_k127_400799_29 membrane - - - 0.000000004261 65.0
DYD1_k127_400799_3 PFAM Amino acid permease K03294 - - 1.263e-226 716.0
DYD1_k127_400799_30 CDP-alcohol phosphatidyltransferase K00995,K08744 - 2.7.8.41,2.7.8.5 0.00000001532 59.0
DYD1_k127_400799_4 Carbon starvation protein K06200 - - 1.912e-218 694.0
DYD1_k127_400799_5 PD-(D/E)XK nuclease superfamily K09124 - - 4.552e-204 662.0
DYD1_k127_400799_6 4Fe-4S ferredoxin iron-sulfur binding domain protein - - - 2.297e-194 620.0
DYD1_k127_400799_7 ATPase associated with various cellular activities - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002762 582.0
DYD1_k127_400799_8 Metallo-beta-lactamase superfamily K01069 - 3.1.2.6 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002386 509.0
DYD1_k127_400799_9 COG1013 Pyruvate ferredoxin oxidoreductase and related 2-oxoacid ferredoxin K00175 - 1.2.7.11,1.2.7.3 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001348 474.0
DYD1_k127_4009392_0 Respiratory-chain NADH dehydrogenase, 49 Kd subunit K00333 - 1.6.5.3 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000456 509.0
DYD1_k127_4009392_1 Belongs to the N(4) N(6)-methyltransferase family K00571 - 2.1.1.72 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004739 436.0
DYD1_k127_4009392_10 NADH-Ubiquinone oxidoreductase (complex I) chain 5 L domain protein K00341 - 1.6.5.3 0.0000005201 52.0
DYD1_k127_4009392_2 NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient. This subunit may bind ubiquinone K00337 - 1.6.5.3 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005169 326.0
DYD1_k127_4009392_3 NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient K00338 - 1.6.5.3 0.000000000000000000000000000000000000000000942 162.0
DYD1_k127_4009392_4 NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient K00332 GO:0003674,GO:0003824,GO:0003954,GO:0006091,GO:0006119,GO:0006120,GO:0006139,GO:0006163,GO:0006725,GO:0006753,GO:0006793,GO:0006796,GO:0006807,GO:0008137,GO:0008150,GO:0008152,GO:0009117,GO:0009123,GO:0009126,GO:0009141,GO:0009144,GO:0009150,GO:0009161,GO:0009167,GO:0009199,GO:0009205,GO:0009259,GO:0009987,GO:0015980,GO:0016310,GO:0016491,GO:0016651,GO:0016655,GO:0017144,GO:0019637,GO:0019693,GO:0022900,GO:0022904,GO:0034641,GO:0042773,GO:0042775,GO:0044237,GO:0044238,GO:0044281,GO:0045333,GO:0046034,GO:0046483,GO:0050136,GO:0055086,GO:0055114,GO:0071704,GO:0072521,GO:1901135,GO:1901360,GO:1901564 1.6.5.3 0.00000000000000000000000000000000000000001161 164.0
DYD1_k127_4009392_5 23S rRNA-intervening sequence protein - - - 0.000000000000000000000000000002363 123.0
DYD1_k127_4009392_6 Binds the 23S rRNA K02909 - - 0.000000000000000000000000000117 119.0
DYD1_k127_4009392_7 NADH-ubiquinone/plastoquinone oxidoreductase chain 4L K00340 - 1.6.5.3 0.0000000000000000000000000001685 120.0
DYD1_k127_4009392_8 NADH-ubiquinone/plastoquinone oxidoreductase chain 6 K00339 - 1.6.5.3 0.00000000000000000000007435 108.0
DYD1_k127_4009392_9 Protein of unknown function (DUF1385) - - - 0.0000000000000000000002728 98.0
DYD1_k127_4013393_0 penicillin amidase K01434 - 3.5.1.11 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007076 385.0
DYD1_k127_4013393_1 prohibitin homologues - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000001784 302.0
DYD1_k127_4013393_2 Hydrolyzes RNA 2',3'-cyclic phosphodiester to an RNA 2'- phosphomonoester K01975 - 3.1.4.58 0.0000000000000000000000000000004136 130.0
DYD1_k127_4013393_3 Belongs to the amidase family K01426 - 3.5.1.4 0.000000000000000000000000000101 121.0
DYD1_k127_4056491_0 Domain of Unknown Function with PDB structure (DUF3857) - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006354 523.0
DYD1_k127_4056491_1 DeoC/LacD family aldolase K11645 - 4.1.2.13 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004073 338.0
DYD1_k127_4056491_2 Domain of Unknown Function with PDB structure (DUF3857) - - - 0.00000000000000001071 88.0
DYD1_k127_4056887_0 The UvrABC repair system catalyzes the recognition and processing of DNA lesions. UvrC both incises the 5' and 3' sides of the lesion. The N-terminal half is responsible for the 3' incision and the C-terminal half is responsible for the 5' incision K03703 - - 4.065e-198 640.0
DYD1_k127_4056887_1 Amidohydrolase family - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003275 562.0
DYD1_k127_4056887_10 Peptidase C14 caspase catalytic subunit p20 - - - 0.0000001749 55.0
DYD1_k127_4056887_11 Insulinase (Peptidase family M16) - - - 0.000009638 51.0
DYD1_k127_4056887_2 Aminotransferase class-V - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005558 459.0
DYD1_k127_4056887_3 Catalyzes the conversion of 1-hydroxy-2-methyl-2-(E)- butenyl 4-diphosphate (HMBPP) into a mixture of isopentenyl diphosphate (IPP) and dimethylallyl diphosphate (DMAPP). Acts in the terminal step of the DOXP MEP pathway for isoprenoid precursor biosynthesis K02945,K03527 - 1.17.7.4 0.00000000000000000000000000000000000000000000000000000000000000000004624 242.0
DYD1_k127_4056887_4 pfkB family carbohydrate kinase K18478 - 2.7.1.184 0.000000000000000000000000000000000000000000000000000000000000000006405 236.0
DYD1_k127_4056887_5 protein kinase activity - - - 0.00000000000000000000000000000000000000000000000000000001103 218.0
DYD1_k127_4056887_7 CHAT domain - - - 0.00000000000000000000000000000000000000000004161 186.0
DYD1_k127_4056887_8 peptidase M15B and M15C DD-carboxypeptidase VanY - - - 0.000000000000000000006613 104.0
DYD1_k127_4056887_9 PFAM peptidase S1 and S6, chymotrypsin Hap K04771 - 3.4.21.107 0.000000005512 67.0
DYD1_k127_4068451_0 Sigma-70 region 2 - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000002661 295.0
DYD1_k127_4083307_0 serine-type peptidase activity K01278 - 3.4.14.5 5.199e-210 674.0
DYD1_k127_4083307_1 Large extracellular alpha-helical protein K06894 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002395 651.0
DYD1_k127_4083307_2 Peptidase family S58 K01266 - 3.4.11.19 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000135 514.0
DYD1_k127_4083307_3 Protein of unknown function (DUF2891) - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009114 469.0
DYD1_k127_4083307_4 Phosphate acyltransferases - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000003684 275.0
DYD1_k127_4083307_7 Regulatory protein GntR HTH K03710 - - 0.00000006309 59.0
DYD1_k127_4083307_8 Sodium/hydrogen exchanger family - - - 0.00000007044 56.0
DYD1_k127_4083307_9 SMART Rhodanese domain protein - - - 0.00000397 49.0
DYD1_k127_4087562_0 PFAM alkyl hydroperoxide reductase Thiol specific antioxidant Mal allergen - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001451 363.0
DYD1_k127_4087562_1 ATPases associated with a variety of cellular activities K10112 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002316 368.0
DYD1_k127_4087562_2 myo-inosose-2 dehydratase activity K06606 - 5.3.99.11 0.0000001642 59.0
DYD1_k127_4106108_0 cell shape determining protein MreB K03569 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001144 552.0
DYD1_k127_4106108_1 - - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004517 484.0
DYD1_k127_4106108_10 PFAM FecR protein - - - 0.00000000000000000000000000004167 132.0
DYD1_k127_4106108_11 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily - - - 0.000000000000000000000001873 108.0
DYD1_k127_4106108_12 shape-determining protein MreD K03571 - - 0.0001203 51.0
DYD1_k127_4106108_2 Beta-lactamase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007134 440.0
DYD1_k127_4106108_3 Serine threonine protein kinase K12132 - 2.7.11.1 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001583 409.0
DYD1_k127_4106108_4 Penicillin-binding protein, dimerisation domain K05515 - 3.4.16.4 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008311 403.0
DYD1_k127_4106108_5 PFAM Integral membrane protein TerC K05794 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001389 354.0
DYD1_k127_4106108_6 Peptidoglycan polymerase that is essential for cell wall elongation K05837 - - 0.000000000000000000000000000000000000000000000000000000000000000003051 239.0
DYD1_k127_4106108_7 diguanylate cyclase - - - 0.0000000000000000000000000000000000000000001538 178.0
DYD1_k127_4106108_8 Peptidylprolyl isomerase K03770 - 5.2.1.8 0.000000000000000000000000000000000002776 158.0
DYD1_k127_4106108_9 Involved in formation and maintenance of cell shape K03570 - - 0.000000000000000000000000000000003669 139.0
DYD1_k127_4109876_0 TIGRFAM YD repeat protein - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007086 439.0
DYD1_k127_4109876_1 Catalyzes the interconversion of L-alanine and D- alanine. May also act on other amino acids K01775 - 5.1.1.1 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004129 312.0
DYD1_k127_4109876_2 Tetratricopeptide repeat - - - 0.0000000000000000000000000000000000000000000003997 191.0
DYD1_k127_4109876_3 S1/P1 Nuclease - - - 0.00000000000000000000000000000004558 138.0
DYD1_k127_4109876_4 Peptidase M16 inactive domain - - - 0.0000001233 65.0
DYD1_k127_4143441_0 FAD linked oxidases, C-terminal domain K00104 - 1.1.3.15 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007662 505.0
DYD1_k127_4143441_1 Amino acid permease K03294 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003833 405.0
DYD1_k127_4143441_2 mechanosensitive ion channel - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001007 365.0
DYD1_k127_4143441_3 Beta-lactamase K17836 - 3.5.2.6 0.0000000000000000000000000000000000000000000000000000000000000000000000147 254.0
DYD1_k127_4143441_4 Catalyzes 2 different reactions between oxygene and the acireductone 1,2-dihydroxy-3-keto-5-methylthiopentene (DHK-MTPene) depending upon the metal bound in the active site. Fe-containing acireductone dioxygenase (Fe-ARD) produces formate and 2-keto-4- methylthiobutyrate (KMTB), the alpha-ketoacid precursor of methionine in the methionine recycle pathway. Ni-containing acireductone dioxygenase (Ni-ARD) produces methylthiopropionate, carbon monoxide and formate, and does not lie on the methionine recycle pathway K08967 - 1.13.11.53,1.13.11.54 0.000000000000000000000000000000000000000000000000000000000000000007666 228.0
DYD1_k127_4143441_5 Bifunctional enzyme that catalyzes the enolization of 2,3-diketo-5-methylthiopentyl-1-phosphate (DK-MTP-1-P) into the intermediate 2-hydroxy-3-keto-5-methylthiopentenyl-1-phosphate (HK-MTPenyl-1-P), which is then dephosphorylated to form the acireductone 1,2-dihydroxy-3-keto-5-methylthiopentene (DHK- MTPene) K09880 - 3.1.3.77 0.0000000000000000000000000000000000000000000000000000000000000000173 232.0
DYD1_k127_4143441_6 peptidyl-tyrosine sulfation K03217,K06872 - - 0.000000000000000000000000000000000003593 150.0
DYD1_k127_4143441_7 PFAM Biopolymer transport protein ExbD TolR K03559,K03560 - - 0.00000000004782 69.0
DYD1_k127_4143527_0 Phosphoenolpyruvate phosphomutase K01637 - 4.1.3.1 2.856e-202 637.0
DYD1_k127_4143527_1 Malate synthase K01638 - 2.3.3.9 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005398 513.0
DYD1_k127_4143527_2 Prolyl oligopeptidase family - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001666 364.0
DYD1_k127_4148455_0 Myo-inositol-1-phosphate synthase K01858 - 5.5.1.4 1.051e-212 669.0
DYD1_k127_4148455_1 C-terminal, D2-small domain, of ClpB protein - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001798 460.0
DYD1_k127_4148455_2 Glycerophosphoryl diester phosphodiesterase family K01126 - 3.1.4.46 0.00000000000000000000000000001472 126.0
DYD1_k127_4148455_3 helix_turn_helix, arabinose operon control protein - - - 0.000000000000000000000004237 113.0
DYD1_k127_4148455_4 Armadillo/beta-catenin-like repeats - - - 0.000000000000000002176 95.0
DYD1_k127_4148455_5 Protein of unknown function (DUF3108) - - - 0.000000000001364 78.0
DYD1_k127_4148455_6 heat shock protein binding K03686,K05516 - - 0.000000000001784 78.0
DYD1_k127_4153394_0 Acts as a processive, ATP-dependent zinc metallopeptidase for both cytoplasmic and membrane proteins. Plays a role in the quality control of integral membrane proteins K03798 - - 2.444e-256 805.0
DYD1_k127_4153394_1 Peptidase S46 - - - 3.88e-231 736.0
DYD1_k127_4153394_2 PFAM UvrD REP helicase K03657 - 3.6.4.12 7.686e-218 702.0
DYD1_k127_4153394_3 6-O-methylguanine DNA methyltransferase, DNA binding domain K10778 - 2.1.1.63 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000009769 286.0
DYD1_k127_4153394_4 Ligates lysine onto the cytidine present at position 34 of the AUA codon-specific tRNA(Ile) that contains the anticodon CAU, in an ATP-dependent manner. Cytidine is converted to lysidine, thus changing the amino acid specificity of the tRNA from methionine to isoleucine K04075 - 6.3.4.19 0.0000000000000000000000000000000000000000009249 171.0
DYD1_k127_4153394_5 Catalyzes the condensation of para-aminobenzoate (pABA) with 6-hydroxymethyl-7,8-dihydropterin diphosphate (DHPt-PP) to form 7,8-dihydropteroate (H2Pte), the immediate precursor of folate derivatives K00796,K13941 - 2.5.1.15,2.7.6.3 0.0000000000000000000000000000000003799 133.0
DYD1_k127_4161133_0 AcrB/AcrD/AcrF family K03296 - - 0.0 1638.0
DYD1_k127_4161133_1 Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family K02005,K03585 - - 0.00000000000000000000000000000000000000000000000000000000000000006094 239.0
DYD1_k127_4161133_2 DinB family - - - 0.000000000000000000000000000000000000000000001699 170.0
DYD1_k127_4161133_3 Bacterial regulatory proteins, tetR family - - - 0.00000000000000000000000000000000000000000000291 172.0
DYD1_k127_4161133_4 endonuclease - - - 0.00000004473 61.0
DYD1_k127_4161133_5 Belongs to the UPF0337 (CsbD) family - - - 0.00003176 53.0
DYD1_k127_4165513_0 Belongs to the Glu Leu Phe Val dehydrogenases family K00261 - 1.4.1.3 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002212 576.0
DYD1_k127_4165513_1 tRNA processing K06864 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000165 277.0
DYD1_k127_4165513_2 Has lipid A 3-O-deacylase activity. Hydrolyzes the ester bond at the 3 position of lipid A, a bioactive component of lipopolysaccharide (LPS), thereby releasing the primary fatty acyl moiety - - - 0.00000000005735 76.0
DYD1_k127_4165513_3 Tetratricopeptide repeat - - - 0.00007566 55.0
DYD1_k127_4174011_0 Catalyzes the ATP-dependent amination of UTP to CTP with either L-glutamine or ammonia as the source of nitrogen. Regulates intracellular CTP levels through interactions with the four ribonucleotide triphosphates K01937 - 6.3.4.2 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001965 396.0
DYD1_k127_4174011_1 Cytidylyltransferase K00979 - 2.7.7.38 0.000000000000000000000000000000000000000000000000000000000006867 218.0
DYD1_k127_4174011_2 DinB family - - - 0.000000000000000000005741 98.0
DYD1_k127_4178661_0 - - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000282 473.0
DYD1_k127_4178661_1 Virulence factor BrkB K07058 - - 0.000000000000000000000000000000000000000000000000000000000000000000000006672 253.0
DYD1_k127_4178661_2 - - - - 0.00000000000000000006276 92.0
DYD1_k127_4178661_3 oxidoreductase activity K07114 - - 0.000000000003537 79.0
DYD1_k127_418064_0 3'(2'),5'-bisphosphate nucleotidase activity - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002816 356.0
DYD1_k127_418064_1 Glutathione peroxidase - - - 0.00000007239 62.0
DYD1_k127_418064_2 PFAM peptidase M28 - - - 0.0003405 46.0
DYD1_k127_4204904_0 non-ribosomal peptide synthetase K16416 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001744 565.0
DYD1_k127_4209187_0 siderophore transport K02014 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002226 612.0
DYD1_k127_4209187_1 K COG5665 CCR4-NOT transcriptional regulation complex, NOT5 subunit - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002258 552.0
DYD1_k127_4209187_2 COG0635 Coproporphyrinogen III oxidase and related Fe-S - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003061 507.0
DYD1_k127_4209187_3 COG0644 Dehydrogenases (flavoproteins) - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005311 420.0
DYD1_k127_4209187_4 PQQ-like domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007704 365.0
DYD1_k127_4209187_5 PQQ-like domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009778 339.0
DYD1_k127_4209187_6 FtsX-like permease family - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006107 309.0
DYD1_k127_4209187_7 - - - - 0.00000000000000000000005529 105.0
DYD1_k127_421021_0 Penicillin-binding protein, dimerisation domain K03587 - 3.4.16.4 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005867 478.0
DYD1_k127_421021_1 The RuvA-RuvB complex in the presence of ATP renatures cruciform structure in supercoiled DNA with palindromic sequence, indicating that it may promote strand exchange reactions in homologous recombination. RuvAB is a helicase that mediates the Holliday junction migration by localized denaturation and reannealing K03551 - 3.6.4.12 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002882 436.0
DYD1_k127_421021_10 Belongs to the MraZ family K03925 - - 0.000000000000000000000000000000000000000000000001115 178.0
DYD1_k127_421021_11 LemA family K03744 - - 0.000000000000000000000000000000000000000000001451 172.0
DYD1_k127_421021_12 PFAM Roadblock LC7 family protein - - - 0.00000000000000000000000000000000000000000001773 166.0
DYD1_k127_421021_13 BMC K04027 - - 0.0000000000000000000000000000000001792 134.0
DYD1_k127_421021_14 nucleotidyltransferase activity - - - 0.00000000000000000000000000000003751 135.0
DYD1_k127_421021_15 ethanolamine utilization protein EutN carboxysome structural protein Ccml K04028,K08697 - - 0.00000000000000000000000000001532 119.0
DYD1_k127_421021_16 Catalyzes the last two sequential reactions in the de novo biosynthetic pathway for UDP-N-acetylglucosamine (UDP- GlcNAc). The C-terminal domain catalyzes the transfer of acetyl group from acetyl coenzyme A to glucosamine-1-phosphate (GlcN-1-P) to produce N-acetylglucosamine-1-phosphate (GlcNAc-1-P), which is converted into UDP-GlcNAc by the transfer of uridine 5- monophosphate (from uridine 5-triphosphate), a reaction catalyzed by the N-terminal domain K04042 - 2.3.1.157,2.7.7.23 0.0000000000000000000000000005418 118.0
DYD1_k127_421021_17 TPM domain K06872 - - 0.000000000000000000000001232 115.0
DYD1_k127_421021_18 ethanolamine utilization protein EutN carboxysome structural protein Ccml K04028 - - 0.0000000000000000000000019 105.0
DYD1_k127_421021_19 Involved in cell wall formation. Catalyzes the final step in the synthesis of UDP-N-acetylmuramoyl-pentapeptide, the precursor of murein K01929 - 6.3.2.10 0.00000000000000000000008663 104.0
DYD1_k127_421021_2 Transfers and isomerizes the ribose moiety from AdoMet to the 7-aminomethyl group of 7-deazaguanine (preQ1-tRNA) to give epoxyqueuosine (oQ-tRNA) K07568 - 2.4.99.17 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008002 343.0
DYD1_k127_421021_20 COG0456 Acetyltransferases K03789 - 2.3.1.128 0.000000000000003307 83.0
DYD1_k127_421021_21 Virulence factor BrkB K07058 - - 0.00000001093 59.0
DYD1_k127_421021_22 Ethanolamine utilisation protein EutN/carboxysome K04028 - - 0.00000001153 59.0
DYD1_k127_421021_23 Virulence factor BrkB K07058 - - 0.00000008066 61.0
DYD1_k127_421021_24 Tetratricopeptide repeat - - - 0.000006961 57.0
DYD1_k127_421021_25 Essential cell division protein. May link together the upstream cell division proteins, which are predominantly cytoplasmic, with the downstream cell division proteins, which are predominantly periplasmic - - - 0.00002069 51.0
DYD1_k127_421021_3 ADP-ribosylation factor family K06883 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000232 312.0
DYD1_k127_421021_4 Required for morphogenesis under gluconeogenic growth conditions - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003252 310.0
DYD1_k127_421021_5 Specifically methylates the N4 position of cytidine in position 1402 (C1402) of 16S rRNA K03438 - 2.1.1.199 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000002771 302.0
DYD1_k127_421021_6 ZIP Zinc transporter K07238,K16267 - - 0.0000000000000000000000000000000000000000000000000000000000002464 222.0
DYD1_k127_421021_7 Class II Aldolase and Adducin N-terminal domain K01628 - 4.1.2.17 0.000000000000000000000000000000000000000000000000000000000009825 215.0
DYD1_k127_421021_8 Modulates transcription in response to changes in cellular NADH NAD( ) redox state K01926 GO:0003674,GO:0005488,GO:0005515,GO:0042802 - 0.000000000000000000000000000000000000000000000000002077 191.0
DYD1_k127_421021_9 The RuvA-RuvB complex in the presence of ATP renatures cruciform structure in supercoiled DNA with palindromic sequence, indicating that it may promote strand exchange reactions in homologous recombination. RuvAB is a helicase that mediates the Holliday junction migration by localized denaturation and reannealing. RuvA stimulates, in the presence of DNA, the weak ATPase activity of RuvB K03550 - 3.6.4.12 0.000000000000000000000000000000000000000000000000005571 189.0
DYD1_k127_4224510_0 oxidoreductase activity K00274 - 1.4.3.4 0.00000000000000000000000000000000000000000000000000000000000000000000000000002114 274.0
DYD1_k127_4224510_1 Putative restriction endonuclease - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000007691 256.0
DYD1_k127_4224510_2 Permease family K06901 - - 0.0000000005149 61.0
DYD1_k127_4232663_0 Phosphomethylpyrimidine kinase K03272 GO:0000271,GO:0003674,GO:0003824,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005975,GO:0005976,GO:0006629,GO:0006793,GO:0006796,GO:0008150,GO:0008152,GO:0008610,GO:0008653,GO:0008713,GO:0008920,GO:0009058,GO:0009059,GO:0009103,GO:0009244,GO:0009311,GO:0009312,GO:0009987,GO:0016051,GO:0016301,GO:0016310,GO:0016740,GO:0016757,GO:0016772,GO:0019200,GO:0033692,GO:0034637,GO:0034645,GO:0043170,GO:0044237,GO:0044238,GO:0044249,GO:0044255,GO:0044260,GO:0044262,GO:0044264,GO:0044424,GO:0044444,GO:0044464,GO:0046401,GO:0046835,GO:0071704,GO:1901135,GO:1901137,GO:1901576,GO:1903509 2.7.1.167,2.7.7.70 0.00000000000000000000000000000000000000000000000000000000000000004697 234.0
DYD1_k127_4232663_1 D,d-heptose 1,7-bisphosphate phosphatase K03273 - 3.1.3.82,3.1.3.83 0.0000000000000000000000000000000000000000000000000002016 190.0
DYD1_k127_4233741_0 Male sterility protein K01897 - 6.2.1.3 1.211e-266 850.0
DYD1_k127_4233741_1 epimerase dehydratase K00091 - 1.1.1.219 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005097 308.0
DYD1_k127_4233741_2 Peptidase family S41 - - - 0.00000000003623 76.0
DYD1_k127_4245520_0 Flavin containing amine oxidoreductase - - - 2.65e-293 905.0
DYD1_k127_4245520_1 The glycine cleavage system catalyzes the degradation of glycine K00605 - 2.1.2.10 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002947 560.0
DYD1_k127_4245520_2 TIGRFAM phytoene desaturase K10027 - 1.3.99.26,1.3.99.28,1.3.99.29,1.3.99.31 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000109 542.0
DYD1_k127_4245520_3 Beta-eliminating lyase K01620 - 4.1.2.48 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008198 449.0
DYD1_k127_4245520_4 Catalyzes the gamma-elimination of phosphate from L- phosphohomoserine and the beta-addition of water to produce L- threonine K01733 - 4.2.3.1 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005615 442.0
DYD1_k127_4245520_5 amino acid K03294,K13868 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002476 357.0
DYD1_k127_4245520_6 Ring hydroxylating alpha subunit (catalytic domain) K00479 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000243 351.0
DYD1_k127_4245520_7 Catalyzes the ATP-dependent phosphorylation of L- homoserine to L-homoserine phosphate K00872 - 2.7.1.39 0.00000000000000000000000000000000000000000000000000000000003158 216.0
DYD1_k127_4245520_8 Carboxypeptidase regulatory-like domain - - - 0.0000000000000000000000000000000000000005371 156.0
DYD1_k127_4250214_0 The transhydrogenation between NADH and NADP is coupled to respiration and ATP hydrolysis and functions as a proton pump across the membrane K00325 - 1.6.1.2 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000139 459.0
DYD1_k127_4250214_1 aminopeptidase activity - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001488 462.0
DYD1_k127_4250214_10 Outer membrane protein (OmpH-like) K06142 - - 0.0000000007514 67.0
DYD1_k127_4250214_11 Outer membrane protein (OmpH-like) K06142 - - 0.0000001681 61.0
DYD1_k127_4250214_12 Tetratricopeptide repeat - - - 0.00000821 60.0
DYD1_k127_4250214_2 Peptidase M1, membrane alanine aminopeptidase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007453 345.0
DYD1_k127_4250214_3 Protein of unknown function (DUF1009) K09949 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000001264 303.0
DYD1_k127_4250214_4 PFAM Peptidase M16 inactive domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000001054 306.0
DYD1_k127_4250214_5 Involved in the biosynthesis of lipid A, a phosphorylated glycolipid that anchors the lipopolysaccharide to the outer membrane of the cell K00677 - 2.3.1.129 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000003268 299.0
DYD1_k127_4250214_6 Peptidase M16 inactive domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000002282 298.0
DYD1_k127_4250214_7 Catalyzes the 2'-O-methylation of the ribose of cytidine 1402 (C1402) in 16S rRNA K07056 - 2.1.1.198 0.00000000000000000000000000000000000000000000000000000000000000000000000000000003037 277.0
DYD1_k127_4250214_8 FabA-like domain K02372 - 4.2.1.59 0.000000000000000000000000000000000000000000000001067 178.0
DYD1_k127_4250214_9 TIGRFAM outer membrane protein assembly complex, YaeT protein K07277 - - 0.000000000000187 81.0
DYD1_k127_4309499_0 PFAM SAICAR synthetase K01923 GO:0003674,GO:0003824,GO:0004639,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006139,GO:0006163,GO:0006164,GO:0006188,GO:0006189,GO:0006725,GO:0006753,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009117,GO:0009123,GO:0009124,GO:0009126,GO:0009127,GO:0009150,GO:0009152,GO:0009156,GO:0009161,GO:0009165,GO:0009167,GO:0009168,GO:0009259,GO:0009260,GO:0009987,GO:0016874,GO:0016879,GO:0016881,GO:0018130,GO:0019438,GO:0019637,GO:0019693,GO:0034641,GO:0034654,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0044424,GO:0044464,GO:0046040,GO:0046390,GO:0046483,GO:0055086,GO:0071704,GO:0072521,GO:0072522,GO:0090407,GO:1901135,GO:1901137,GO:1901293,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576 6.3.2.6 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003663 367.0
DYD1_k127_4309499_1 Two component transcriptional regulator, winged helix family - - - 0.00000000000000000000000000000000000000000000000000000000000000000002357 243.0
DYD1_k127_4309499_2 Mycothiol maleylpyruvate isomerase N-terminal domain - - - 0.00000000000000000000000000001075 123.0
DYD1_k127_4309499_3 peptidyl-tyrosine sulfation - - - 0.000000000001271 80.0
DYD1_k127_4309499_4 PFAM helix-turn-helix, Fis-type - - - 0.000007195 53.0
DYD1_k127_4309499_5 Domain of unknown function (DUF4388) - - - 0.00001791 56.0
DYD1_k127_4309499_6 COG3209 Rhs family protein - - - 0.00003624 56.0
DYD1_k127_4317489_0 Bacterial protein of unknown function (DUF885) - - - 1.008e-205 656.0
DYD1_k127_4317489_1 Tetratricopeptide repeat - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001327 569.0
DYD1_k127_4317489_2 TIR domain - - - 0.00000000000000000000316 105.0
DYD1_k127_4336130_0 PFAM Prolyl oligopeptidase family - - - 7.769e-258 807.0
DYD1_k127_4336130_1 Stage II sporulation protein K06381 - - 0.000000000000000000000000000000000000000000000000000003461 206.0
DYD1_k127_4336130_2 Prokaryotic N-terminal methylation motif K02650 - - 0.0002566 54.0
DYD1_k127_4358393_0 Peptidase, S9A B C family, catalytic domain protein K01303 - 3.4.19.1 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007216 459.0
DYD1_k127_4358393_1 Protein of unknown function (DUF983) - - - 0.0000002007 58.0
DYD1_k127_436686_0 Catalyzes the reversible conversion of 2- phosphoglycerate into phosphoenolpyruvate. It is essential for the degradation of carbohydrates via glycolysis K01689 - 4.2.1.11 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006592 596.0
DYD1_k127_436686_1 Catalyzes the interconversion of 2-phosphoglycerate and 3-phosphoglycerate K15633 - 5.4.2.12 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003228 434.0
DYD1_k127_436686_2 Transporter-associated region K03699 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002665 434.0
DYD1_k127_436686_3 CarD-like/TRCF domain K07736 - - 0.000000000000000000000000000000000000000538 154.0
DYD1_k127_4374034_0 MacB-like periplasmic core domain - - - 5.263e-220 708.0
DYD1_k127_4374034_1 efflux transmembrane transporter activity - - - 1.019e-197 645.0
DYD1_k127_4374034_2 efflux transmembrane transporter activity K02004 - - 0.00000000008102 63.0
DYD1_k127_4391903_0 SdhA B are the catalytic subcomplex and can exhibit succinate dehydrogenase activity in the absence of SdhC D which are the membrane components and form cytochrome b556 K00239 GO:0003674,GO:0003824,GO:0006091,GO:0008150,GO:0008152,GO:0009055,GO:0009061,GO:0009987,GO:0015980,GO:0016491,GO:0022900,GO:0044237,GO:0045333,GO:0055114 1.3.5.1,1.3.5.4 7.103e-274 854.0
DYD1_k127_4391903_1 Catalyzes the reversible oxidation of malate to oxaloacetate K00024 - 1.1.1.37 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000509 459.0
DYD1_k127_4391903_2 TIGRFAM succinate dehydrogenase and fumarate reductase iron-sulfur protein K00240 - 1.3.5.1,1.3.5.4 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001276 340.0
DYD1_k127_4391903_3 Catalyzes the formation of the alpha-1,6-glucosidic linkages in glycogen by scission of a 1,4-alpha-linked oligosaccharide from growing alpha-1,4-glucan chains and the subsequent attachment of the oligosaccharide to the alpha-1,6 position K00700 - 2.4.1.18 0.000000000000000000000000000000000000000000000000000000000000000002085 227.0
DYD1_k127_4391903_4 TIGRFAM succinate dehydrogenase (or fumarate reductase) cytochrome b subunit, b558 family K00241 - - 0.000000000000000000000000000000000000000000000006742 179.0
DYD1_k127_4393456_0 Methylenetetrahydrofolate reductase K00297,K00547 - 1.5.1.20,2.1.1.10 1.563e-242 764.0
DYD1_k127_4393456_1 POT family K03305 - - 2.07e-236 740.0
DYD1_k127_4393456_10 NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient K00331 - 1.6.5.3 0.0000000000000000000000000000000000000000000000000000000000000000000002866 243.0
DYD1_k127_4393456_11 2 iron, 2 sulfur cluster binding K00334,K00335 - 1.6.5.3 0.0000000000000000000000000000000000000000000000000001171 190.0
DYD1_k127_4393456_12 Lamin Tail Domain K07004 - - 0.000000000000000000000000000000000000000000000004145 198.0
DYD1_k127_4393456_13 NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient K00332 - 1.6.5.3 0.000000000000000000000000000000000000000001843 161.0
DYD1_k127_4393456_14 NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient K00330 - 1.6.5.3 0.00000000000000000000000000000000000001304 148.0
DYD1_k127_4393456_15 Sel1-like repeats. - - - 0.00000000000000000000000000000000000001586 151.0
DYD1_k127_4393456_16 thiamine biosynthesis protein ThiS K03154 - - 0.000000000000004019 79.0
DYD1_k127_4393456_17 - - - - 0.000000000001436 78.0
DYD1_k127_4393456_18 PFAM Haemolysin-type calcium-binding repeat - - - 0.000000001582 72.0
DYD1_k127_4393456_19 von Willebrand factor, type A - - - 0.0000005795 61.0
DYD1_k127_4393456_2 Zinc carboxypeptidase K01278 - 3.4.14.5 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001083 581.0
DYD1_k127_4393456_20 PFAM NADH ubiquinone oxidoreductase, subunit G, iron-sulphur binding K00336 - 1.6.5.3 0.00002314 47.0
DYD1_k127_4393456_3 - - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004765 553.0
DYD1_k127_4393456_4 NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain K00335 - 1.6.5.3 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009645 508.0
DYD1_k127_4393456_5 NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient K00333 - 1.6.5.3 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001826 497.0
DYD1_k127_4393456_6 RQC K03654 - 3.6.4.12 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007877 504.0
DYD1_k127_4393456_7 Amidohydrolase family - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000531 433.0
DYD1_k127_4393456_8 thiamine diphosphate biosynthetic process K03149 GO:0003674,GO:0003824,GO:0006725,GO:0006766,GO:0006767,GO:0006772,GO:0006790,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009110,GO:0009228,GO:0009987,GO:0017144,GO:0018130,GO:0019438,GO:0034641,GO:0042364,GO:0042723,GO:0042724,GO:0044237,GO:0044249,GO:0044271,GO:0044272,GO:0044281,GO:0044283,GO:0046483,GO:0071704,GO:0072527,GO:0072528,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576 2.8.1.10 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002124 342.0
DYD1_k127_4393456_9 Domain of unknown function (DUF1731) K07071 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003391 330.0
DYD1_k127_4409667_0 Digests double-stranded RNA. Involved in the processing of primary rRNA transcript to yield the immediate precursors to the large and small rRNAs (23S and 16S). Processes some mRNAs, and tRNAs when they are encoded in the rRNA operon. Processes pre- crRNA and tracrRNA of type II CRISPR loci if present in the organism K03685 - 3.1.26.3 0.0000000000000000000000000000000000000000002191 171.0
DYD1_k127_4409667_1 Belongs to the peptidase S26 family K03100 - 3.4.21.89 0.00000000000000000000000000000000000000001864 164.0
DYD1_k127_4412241_0 serine-type peptidase activity - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001738 551.0
DYD1_k127_4412241_1 Subtilase family - - - 0.0000000000000000000000000000000000000000000959 162.0
DYD1_k127_4412241_2 Prolyl oligopeptidase family - - - 0.0000003356 53.0
DYD1_k127_4414922_0 Radical SAM enzyme that catalyzes the addition of the adenosyl radical to the double bond of 3- (1- carboxyvinyl)oxy benzoate, leading to aminodeoxyfutalosine (AFL), a key intermediate in the formation of menaquinone (MK, vitamin K2) from chorismate K18285 - 2.5.1.120 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002953 379.0
DYD1_k127_4414922_1 Catalyzes the conversion of cyclic dehypoxanthine futalosine (cyclic DHFL) into 1,4-dihydroxy-6-naphthoate, a step in the biosynthesis of menaquinone (MK, vitamin K2) K07083,K11785 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009153 366.0
DYD1_k127_4414922_2 PFAM UbiA prenyltransferase K03179 - 2.5.1.39 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006189 308.0
DYD1_k127_4414922_3 AIR carboxylase K06898 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000195 278.0
DYD1_k127_4414922_4 - - - - 0.000000000000000000000000000000000000000000000001673 183.0
DYD1_k127_4414922_5 Lecithin:cholesterol acyltransferase - - - 0.00000000000000000000000000000000000000000000004461 184.0
DYD1_k127_4416993_0 Protein tyrosine kinase K08884,K12132 GO:0003674,GO:0003824,GO:0004672,GO:0004674,GO:0005575,GO:0005623,GO:0005886,GO:0006464,GO:0006468,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0009889,GO:0009890,GO:0009892,GO:0009987,GO:0010565,GO:0016020,GO:0016301,GO:0016310,GO:0016740,GO:0016772,GO:0016773,GO:0018107,GO:0018193,GO:0018210,GO:0019216,GO:0019217,GO:0019222,GO:0019538,GO:0031323,GO:0031324,GO:0031326,GO:0031327,GO:0036211,GO:0042304,GO:0043170,GO:0043412,GO:0044237,GO:0044238,GO:0044260,GO:0044267,GO:0044464,GO:0045717,GO:0045833,GO:0045922,GO:0046777,GO:0046890,GO:0048519,GO:0048523,GO:0050789,GO:0050794,GO:0051055,GO:0062012,GO:0062014,GO:0065007,GO:0071704,GO:0071944,GO:0080090,GO:0140096,GO:1901564 2.7.11.1 0.000000000000000000000000001592 128.0
DYD1_k127_4416993_1 Protein of unknown function (DUF2662) - - - 0.0000002641 61.0
DYD1_k127_4416993_2 Metal-dependent phosphohydrolase, HD region - - - 0.0009906 45.0
DYD1_k127_4431770_0 Peptidase family M28 - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001908 468.0
DYD1_k127_4431770_1 thioesterase involved in non-ribosomal peptide biosynthesis K01071 - 3.1.2.21 0.00000000000000000000000000000000000000000000000000000000000000000000000000008507 266.0
DYD1_k127_4431770_2 AMP-dependent synthetase - - - 0.0000000000000000000000000000000000000000000009711 172.0
DYD1_k127_4431770_3 MbtH-like protein K05375 - - 0.000000000000000000000000000000001909 130.0
DYD1_k127_4431770_4 LUD domain K00782 - - 0.000000000000000000000008585 109.0
DYD1_k127_4431770_5 Condensation domain - - - 0.00000000000000001359 85.0
DYD1_k127_4435638_0 peptidase S9A, prolyl oligopeptidase domain protein beta-propeller K01354 - 3.4.21.83 7.224e-258 812.0
DYD1_k127_4435638_1 PFAM Protein kinase domain K12132 - 2.7.11.1 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000336 434.0
DYD1_k127_4435638_2 PFAM Beta-lactamase - - - 0.000000000000000000000000000000000000000000000000000000172 204.0
DYD1_k127_4435638_3 Calcineurin-like phosphoesterase K07313 - 3.1.3.16 0.0000000000000000000000000000000000001637 152.0
DYD1_k127_4435638_4 Has a glutathione-disulfide oxidoreductase activity in the presence of NADPH and glutathione reductase. Reduces low molecular weight disulfides and proteins K03676 - - 0.000000000003551 70.0
DYD1_k127_444512_0 Facilitates transcription termination by a mechanism that involves Rho binding to the nascent RNA, activation of Rho's RNA-dependent ATPase activity, and release of the mRNA from the DNA template K03628 - - 2.037e-223 700.0
DYD1_k127_444512_1 ATP-dependent serine protease that mediates the selective degradation of mutant and abnormal proteins as well as certain short-lived regulatory proteins. Required for cellular homeostasis and for survival from DNA damage and developmental changes induced by stress. Degrades polypeptides processively to yield small peptide fragments that are 5 to 10 amino acids long. Binds to DNA in a double-stranded, site-specific manner K01338 - 3.4.21.53 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003304 490.0
DYD1_k127_444512_2 Plays an important role in the de novo pathway of purine nucleotide biosynthesis. Catalyzes the first committed step in the biosynthesis of AMP from IMP K01939 GO:0003674,GO:0003824,GO:0004019,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006139,GO:0006163,GO:0006164,GO:0006167,GO:0006725,GO:0006753,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009117,GO:0009123,GO:0009124,GO:0009126,GO:0009127,GO:0009150,GO:0009152,GO:0009156,GO:0009161,GO:0009165,GO:0009167,GO:0009168,GO:0009259,GO:0009260,GO:0009987,GO:0016874,GO:0016879,GO:0017144,GO:0018130,GO:0019438,GO:0019637,GO:0019693,GO:0034641,GO:0034654,GO:0044208,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0044424,GO:0044464,GO:0046033,GO:0046040,GO:0046390,GO:0046483,GO:0055086,GO:0071704,GO:0072521,GO:0072522,GO:0090407,GO:1901135,GO:1901137,GO:1901293,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576 6.3.4.4 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002571 456.0
DYD1_k127_444512_3 Synthesizes alpha-1,4-glucan chains using ADP-glucose K00703 - 2.4.1.21 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008233 400.0
DYD1_k127_444512_4 Necessary for normal cell division and for the maintenance of normal septation K03978 - - 0.000000000000000000000000000000000000000000000000000107 192.0
DYD1_k127_444512_5 - - - - 0.00000000000000000000000000000000000001406 149.0
DYD1_k127_444512_6 - - - - 0.000000000000000004832 91.0
DYD1_k127_4454518_0 class II (D K K01893 - 6.1.1.22 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001327 601.0
DYD1_k127_4454518_1 D-ala D-ala ligase N-terminus K01921 - 6.3.2.4 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001202 390.0
DYD1_k127_4454518_10 gag-polyprotein putative aspartyl protease - - - 0.00003479 55.0
DYD1_k127_4454518_2 Arginase family K01476 - 3.5.3.1 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001007 331.0
DYD1_k127_4454518_3 Functions as a peptidoglycan terminase that cleaves nascent peptidoglycan strands endolytically to terminate their elongation K07082 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007083 317.0
DYD1_k127_4454518_4 Mitochondrial biogenesis AIM24 - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000003971 300.0
DYD1_k127_4454518_5 tail specific protease K03797 - 3.4.21.102 0.00000000000000000000000000000000000000000000000000000000000001495 231.0
DYD1_k127_4454518_6 - - - - 0.000000000000000000000000000000005526 138.0
DYD1_k127_4454518_7 von Willebrand factor, type A - - - 0.000000000000000000000000007481 121.0
DYD1_k127_4454518_8 peptidoglycan turnover K07102 GO:0000166,GO:0000270,GO:0003674,GO:0003824,GO:0005488,GO:0005524,GO:0005975,GO:0006022,GO:0006040,GO:0006082,GO:0006793,GO:0006796,GO:0006807,GO:0008144,GO:0008150,GO:0008152,GO:0009254,GO:0009987,GO:0016301,GO:0016310,GO:0016740,GO:0016772,GO:0017076,GO:0019200,GO:0019752,GO:0030203,GO:0030554,GO:0032553,GO:0032555,GO:0032559,GO:0035639,GO:0036094,GO:0043167,GO:0043168,GO:0043170,GO:0043436,GO:0044237,GO:0044238,GO:0044262,GO:0044281,GO:0046835,GO:0071704,GO:0097159,GO:0097172,GO:0097367,GO:1901135,GO:1901265,GO:1901363,GO:1901564 2.7.1.221 0.000000000000000000000004545 109.0
DYD1_k127_4454518_9 Could be a nuclease involved in processing of the 5'-end of pre-16S rRNA K07447 - - 0.0000000000000000001462 95.0
DYD1_k127_4465477_0 One of the essential components for the initiation of protein synthesis. Protects formylmethionyl-tRNA from spontaneous hydrolysis and promotes its binding to the 30S ribosomal subunits. Also involved in the hydrolysis of GTP during the formation of the 70S ribosomal complex K02519 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000609 556.0
DYD1_k127_4465477_1 Component of the acetyl coenzyme A carboxylase (ACC) complex. Biotin carboxylase (BC) catalyzes the carboxylation of biotin on its carrier protein (BCCP) and then the CO(2) group is transferred by the transcarboxylase to acetyl-CoA to form malonyl- CoA K01963 - 2.1.3.15,6.4.1.2 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003249 341.0
DYD1_k127_4465477_2 PFAM Mur ligase K11754 - 6.3.2.12,6.3.2.17 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000001384 295.0
DYD1_k127_4465477_3 DHH family K06881 - 3.1.13.3,3.1.3.7 0.00000000000000000000000000000000000000000000000000000000000000000000000000000002847 278.0
DYD1_k127_4465477_4 Required for both de novo synthesis of the corrin ring for the assimilation of exogenous corrinoids. Participates in the adenosylation of a variety of incomplete and complete corrinoids K19221 - 2.5.1.17 0.000000000000000000000000000000000000000000000000000214 190.0
DYD1_k127_4465477_5 nudix family K01515 - 3.6.1.13 0.000000000000000000000000000000000000001408 157.0
DYD1_k127_4465477_6 C-3'',4'' desaturase CrtD - - - 0.000000000000000001044 99.0
DYD1_k127_4465477_7 One of several proteins that assist in the late maturation steps of the functional core of the 30S ribosomal subunit. Associates with free 30S ribosomal subunits (but not with 30S subunits that are part of 70S ribosomes or polysomes). Required for efficient processing of 16S rRNA. May interact with the 5'-terminal helix region of 16S rRNA K02834 - - 0.00000000003957 69.0
DYD1_k127_4465477_8 CAAX protease self-immunity K07052 - - 0.0003549 51.0
DYD1_k127_447119_0 Glucose-1-phosphate cytidylyltransferase K00978 - 2.7.7.33 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001645 408.0
DYD1_k127_447119_1 Belongs to the NAD(P)-dependent epimerase dehydratase family. dTDP-glucose dehydratase subfamily K01710 - 4.2.1.46 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001168 405.0
DYD1_k127_447119_2 Iron-sulfur cluster-binding domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000002425 245.0
DYD1_k127_447119_3 Catalyzes the reduction of dTDP-6-deoxy-L-lyxo-4- hexulose to yield dTDP-L-rhamnose K00067 - 1.1.1.133 0.0000000000000000000000000000000000000000000000000000000004509 212.0
DYD1_k127_447119_4 Parallel beta-helix repeats - - - 0.00000000000000000000000000000000000000000000000003415 190.0
DYD1_k127_447119_5 ADP-glyceromanno-heptose 6-epimerase activity K01709 - 4.2.1.45 0.000000000000000000000000000000000000000005184 156.0
DYD1_k127_4493471_0 PQQ-like domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006387 546.0
DYD1_k127_4493471_1 protein kinase related protein - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008229 514.0
DYD1_k127_4493471_2 beta-propeller repeat - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007067 487.0
DYD1_k127_4493471_3 Iron-containing alcohol dehydrogenase K00001,K13954 - 1.1.1.1 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002531 366.0
DYD1_k127_4493471_4 beta-propeller repeat - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002956 342.0
DYD1_k127_4493471_5 Ankyrin repeat protein - - - 0.0000000000002014 80.0
DYD1_k127_4493471_6 PQQ-like domain - - - 0.00003431 51.0
DYD1_k127_4532353_0 Tricorn protease homolog K08676 - - 0.0 1088.0
DYD1_k127_4532353_1 Glucose / Sorbosone dehydrogenase K21430 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003949 460.0
DYD1_k127_4558987_0 Serine aminopeptidase, S33 - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001011 367.0
DYD1_k127_4558987_1 Belongs to the sodium solute symporter (SSF) (TC 2.A.21) family K03307 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002954 340.0
DYD1_k127_4558987_2 protein kinase related protein - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000002848 306.0
DYD1_k127_4558987_3 Iron-containing alcohol dehydrogenase K00001,K13954 - 1.1.1.1 0.000000000000000000000000000000000000000000000000001902 188.0
DYD1_k127_4558987_4 PFAM Endoribonuclease L-PSP K09022 - 3.5.99.10 0.00000000000000000000000000000005396 136.0
DYD1_k127_45625_0 CHAT domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002547 450.0
DYD1_k127_45625_1 Subtilase family - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000005381 281.0
DYD1_k127_45625_2 DNA-templated transcription, initiation K03088 - - 0.0000000000000000000000000000000000003327 149.0
DYD1_k127_45625_3 Protein of unknown function (DUF1349) - - - 0.000000000000002761 88.0
DYD1_k127_4571609_0 Glutamine amidotransferases class-II K00764 - 2.4.2.14 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002972 567.0
DYD1_k127_4571609_1 ISXO2-like transposase domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003245 335.0
DYD1_k127_4571609_2 Phosphoribosylformylglycinamidine cyclo-ligase K01933 - 6.3.3.1 0.0000000000000000000000000000000000000000000000000000000000000000002984 232.0
DYD1_k127_4571609_3 Competence protein ComEC K02238 - - 0.00000000000000000000000000000000000000000000000002989 192.0
DYD1_k127_4571609_4 Cytochrome c K00406,K08906 - - 0.0000000002565 67.0
DYD1_k127_4584402_1 phosphoesterase, PA-phosphatase related - - - 0.0000000000000000001971 88.0
DYD1_k127_4588255_0 TIGRFAM Polyketide-type polyunsaturated fatty acid synthase, PfaA K15314 - - 0.0 1035.0
DYD1_k127_459332_0 Catalyzes the conversion of D-ribulose 5-phosphate to formate and 3,4-dihydroxy-2-butanone 4-phosphate K14652 - 3.5.4.25,4.1.99.12 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001396 444.0
DYD1_k127_459332_1 Involved in the biosynthesis of porphyrin-containing compound - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002194 345.0
DYD1_k127_459332_2 riboflavin synthase, alpha K00793 GO:0003674,GO:0003824,GO:0004746,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006766,GO:0006767,GO:0006771,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009110,GO:0009231,GO:0009987,GO:0016740,GO:0016765,GO:0017144,GO:0018130,GO:0034641,GO:0042364,GO:0042726,GO:0042727,GO:0044237,GO:0044249,GO:0044271,GO:0044281,GO:0044283,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0071704,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576 2.5.1.9 0.0000000000000000000000000000000000000000000000000000000000004881 216.0
DYD1_k127_459332_3 Belongs to the cytidylate kinase family. Type 1 subfamily K00945 GO:0003674,GO:0003824,GO:0004127,GO:0004592,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006082,GO:0006139,GO:0006520,GO:0006573,GO:0006575,GO:0006725,GO:0006732,GO:0006753,GO:0006766,GO:0006767,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009081,GO:0009108,GO:0009110,GO:0009117,GO:0009123,GO:0009165,GO:0009987,GO:0015939,GO:0015940,GO:0016053,GO:0016301,GO:0016310,GO:0016740,GO:0016772,GO:0016776,GO:0016874,GO:0016879,GO:0016881,GO:0018130,GO:0019205,GO:0019438,GO:0019637,GO:0019752,GO:0032787,GO:0033317,GO:0034641,GO:0034654,GO:0042364,GO:0042398,GO:0043436,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0044283,GO:0044424,GO:0044444,GO:0044464,GO:0046394,GO:0046483,GO:0046939,GO:0046940,GO:0050145,GO:0051186,GO:0051188,GO:0055086,GO:0071704,GO:0072330,GO:0090407,GO:1901293,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576,GO:1901605 2.7.4.25 0.00000000000000000000000000000000000000000000000000000004472 203.0
DYD1_k127_459332_4 TamB, inner membrane protein subunit of TAM complex K09800 - - 0.000000000000000000000000002314 131.0
DYD1_k127_4650503_0 Part of the phosphoribosylformylglycinamidine synthase complex involved in the purines biosynthetic pathway. Catalyzes the ATP-dependent conversion of formylglycinamide ribonucleotide (FGAR) and glutamine to yield formylglycinamidine ribonucleotide (FGAM) and glutamate. The FGAM synthase complex is composed of three subunits. PurQ produces an ammonia molecule by converting glutamine to glutamate. PurL transfers the ammonia molecule to FGAR to form FGAM in an ATP-dependent manner. PurS interacts with PurQ and PurL and is thought to assist in the transfer of the ammonia molecule from PurQ to PurL K01952 - 6.3.5.3 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000727 329.0
DYD1_k127_4650503_1 PFAM DSBA oxidoreductase - - - 0.0000000000000000000000000000000000006974 149.0
DYD1_k127_4650503_2 Part of the phosphoribosylformylglycinamidine synthase complex involved in the purines biosynthetic pathway. Catalyzes the ATP-dependent conversion of formylglycinamide ribonucleotide (FGAR) and glutamine to yield formylglycinamidine ribonucleotide (FGAM) and glutamate. The FGAM synthase complex is composed of three subunits. PurQ produces an ammonia molecule by converting glutamine to glutamate. PurL transfers the ammonia molecule to FGAR to form FGAM in an ATP-dependent manner. PurS interacts with PurQ and PurL and is thought to assist in the transfer of the ammonia molecule from PurQ to PurL K01952 - 6.3.5.3 0.00000000000000000000003578 101.0
DYD1_k127_4650503_3 VKc - - - 0.0000000009924 64.0
DYD1_k127_4654416_0 diphthine synthase activity - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008373 557.0
DYD1_k127_4654416_1 3-demethylubiquinone-9 3-methyltransferase - - - 0.00000000000000000000000000000003342 127.0
DYD1_k127_4654416_2 - - - - 0.00000000001041 71.0
DYD1_k127_4661543_0 Catalyzes the transfer of a two-carbon ketol group from a ketose donor to an aldose acceptor, via a covalent intermediate with the cofactor thiamine pyrophosphate K00615 - 2.2.1.1 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006552 488.0
DYD1_k127_4661543_1 Belongs to the FGGY kinase family K00851 - 2.7.1.12 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002016 391.0
DYD1_k127_4661543_2 Catalyzes the transfer of a two-carbon ketol group from a ketose donor to an aldose acceptor, via a covalent intermediate with the cofactor thiamine pyrophosphate K00615 - 2.2.1.1 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006907 368.0
DYD1_k127_4661543_3 Ribose/Galactose Isomerase K01808 - 5.3.1.6 0.0000000000000000000000000000000000000006323 150.0
DYD1_k127_4671986_0 Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family - - - 0.0 1358.0
DYD1_k127_4671986_1 Aldolase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007613 372.0
DYD1_k127_4671986_2 Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006993 336.0
DYD1_k127_4671986_3 lysine biosynthetic process via aminoadipic acid - - - 0.000000000000000000000000000000000000000000000000000000000003047 232.0
DYD1_k127_4679103_0 phosphorylase K00688 - 2.4.1.1 1.178e-250 792.0
DYD1_k127_4679103_1 Elongation factor G, domain IV K02355 - - 2.543e-227 724.0
DYD1_k127_4679103_2 Leucine-rich repeat K13730 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000002152 289.0
DYD1_k127_4679103_3 Serine Threonine protein kinase K08884,K12132 - 2.7.11.1 0.00000000000000000000000000000000000000000000000000009707 209.0
DYD1_k127_4679103_4 - - - - 0.000000000000000000000000002529 119.0
DYD1_k127_4679103_5 - - - - 0.00000000000000000000001234 109.0
DYD1_k127_4679103_6 Domain of unknown function (DUF4384) - - - 0.0000000000003414 80.0
DYD1_k127_4690663_0 Peptidase family M1 domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001886 560.0
DYD1_k127_4690663_1 Carboxypeptidase regulatory-like domain - - - 0.00000003596 67.0
DYD1_k127_4697317_0 MacB-like periplasmic core domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001541 596.0
DYD1_k127_4698651_0 Aromatic amino acid lyase K01745 - 4.3.1.3 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003264 598.0
DYD1_k127_4698651_1 DNA polymerase III is a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria. This DNA polymerase also exhibits 3' to 5' exonuclease activity K02343 - 2.7.7.7 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002702 385.0
DYD1_k127_4698651_10 Hexosyltransferase - - - 0.00000000000000000000000000000006798 138.0
DYD1_k127_4698651_11 - - - - 0.000000000000000000000000008056 110.0
DYD1_k127_4698651_12 Glucose / Sorbosone dehydrogenase - - - 0.0000000000000000000000673 101.0
DYD1_k127_4698651_13 Endonuclease that specifically degrades the RNA of RNA- DNA hybrids K03469 GO:0003674,GO:0003676,GO:0003824,GO:0004518,GO:0004519,GO:0004521,GO:0004523,GO:0004540,GO:0005488,GO:0006139,GO:0006259,GO:0006260,GO:0006261,GO:0006271,GO:0006273,GO:0006401,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0009056,GO:0009057,GO:0009058,GO:0009059,GO:0009987,GO:0016070,GO:0016787,GO:0016788,GO:0016891,GO:0016893,GO:0019439,GO:0022616,GO:0033567,GO:0034641,GO:0034645,GO:0034655,GO:0043137,GO:0043170,GO:0044237,GO:0044238,GO:0044248,GO:0044249,GO:0044260,GO:0044265,GO:0044270,GO:0046483,GO:0046700,GO:0071704,GO:0090304,GO:0090305,GO:0090501,GO:0090502,GO:0097159,GO:0140098,GO:1901360,GO:1901361,GO:1901363,GO:1901575,GO:1901576 3.1.26.4 0.000000000000000000009444 97.0
DYD1_k127_4698651_14 - - - - 0.0000000000000000001092 99.0
DYD1_k127_4698651_15 CsbD-like - - - 0.00000000001811 66.0
DYD1_k127_4698651_16 Resolvase, N terminal domain - - - 0.00000001339 56.0
DYD1_k127_4698651_2 cellulose binding - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000003712 318.0
DYD1_k127_4698651_3 Predicted integral membrane protein (DUF2270) - - - 0.00000000000000000000000000000000000000000000000000000000000004579 226.0
DYD1_k127_4698651_4 Transcriptional coactivator pterin dehydratase K01724 - 4.2.1.96 0.00000000000000000000000000000000000000000000000002034 183.0
DYD1_k127_4698651_5 Catalyzes the deamination of adenosine to inosine at the wobble position 34 of tRNA(Arg2) K11991 - 3.5.4.33 0.0000000000000000000000000000000000000000002025 163.0
DYD1_k127_4698651_6 - - - - 0.0000000000000000000000000000000000000000004813 163.0
DYD1_k127_4698651_7 DinB superfamily - - - 0.000000000000000000000000000000000001347 143.0
DYD1_k127_4698651_8 Catalyzes the oxidation of 3-carboxy-2-hydroxy-4- methylpentanoate (3-isopropylmalate) to 3-carboxy-4-methyl-2- oxopentanoate. The product decarboxylates to 4-methyl-2 oxopentanoate K00030 - 1.1.1.41 0.000000000000000000000000000000002002 130.0
DYD1_k127_4745277_0 Peptidase family M3 K01284 - 3.4.15.5 6.391e-272 842.0
DYD1_k127_4745277_1 Inhibitor of apoptosis-promoting Bax1 K06890 - - 0.00000000000000000000003372 100.0
DYD1_k127_4747771_0 UDP-N-acetylglucosamine 2-epimerase K01791 - 5.1.3.14 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001006 441.0
DYD1_k127_4747771_1 Heparinase II/III-like protein - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001001 327.0
DYD1_k127_4747771_2 UDP binding domain K13015 - 1.1.1.136 0.000000000000000000000000000000000001633 142.0
DYD1_k127_4747771_3 TIGRFAM asparagine synthase (glutamine-hydrolyzing) K01953 - 6.3.5.4 0.00000000000000000000000000000000205 131.0
DYD1_k127_4781272_0 Vault protein inter-alpha-trypsin domain K07114 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005337 504.0
DYD1_k127_4781272_1 Major facilitator superfamily - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000154 295.0
DYD1_k127_4781272_2 XanTHIne and CO dehydrogenases maturation factor, XdhC CoxF family K07402 - - 0.0000000000000000000005622 100.0
DYD1_k127_4781272_3 to plant photosystem II stability assembly factor - - - 0.000001773 55.0
DYD1_k127_4791719_0 Cys/Met metabolism PLP-dependent enzyme K01760,K17217 - 4.4.1.1,4.4.1.2,4.4.1.8 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004827 498.0
DYD1_k127_4791719_1 Sigma-54 interaction domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002204 392.0
DYD1_k127_4791719_10 Serine/threonine phosphatases, family 2C, catalytic domain K20074 - 3.1.3.16 0.0000000000000000000000000000000000000000000000000000000000000000008745 238.0
DYD1_k127_4791719_11 Domain of unknown function (DUF4162) K01990 - - 0.0000000000000000000000000000000000000000000000000000000005917 215.0
DYD1_k127_4791719_12 Belongs to the precorrin methyltransferase family K02302,K02303,K13542 - 1.3.1.76,2.1.1.107,4.2.1.75,4.99.1.4 0.0000000000000000000000000000000000000000000000000000000008252 210.0
DYD1_k127_4791719_13 Cytochrome C assembly protein - - - 0.00000000000000000000000000000000000000000001706 172.0
DYD1_k127_4791719_14 Metalloenzyme superfamily - - - 0.0000000000000000000000000000000000000000002811 167.0
DYD1_k127_4791719_15 Transport permease protein K01992 - - 0.0000000000000000000000000000000000121 146.0
DYD1_k127_4791719_16 PFAM aminotransferase, class I K00812 - 2.6.1.1 0.000000000000000000000000000000006594 131.0
DYD1_k127_4791719_17 TIGRFAM TonB family protein K03832 - - 0.0000000000000000000000000000004156 140.0
DYD1_k127_4791719_18 DNA-templated transcription, initiation K03088 - - 0.0000000000000000000000000000896 123.0
DYD1_k127_4791719_19 von Willebrand factor, type A K07114 - - 0.00000000000000000000001353 114.0
DYD1_k127_4791719_2 Proline dehydrogenase K00318 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005966 380.0
DYD1_k127_4791719_20 NfeD-like C-terminal, partner-binding - - - 0.00000000000000003682 89.0
DYD1_k127_4791719_21 Peptidase M16 inactive domain K07263,K07623 - - 0.00000000000000298 89.0
DYD1_k127_4791719_3 Catalyzes the NADPH-dependent reduction of glutamyl- tRNA(Glu) to glutamate 1-semialdehyde (GSA) K02492 - 1.2.1.70 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003334 370.0
DYD1_k127_4791719_4 Pyridoxal-phosphate dependent enzyme K01738 - 2.5.1.47 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003659 344.0
DYD1_k127_4791719_5 PFAM binding-protein-dependent transport systems inner membrane component K02034 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006279 317.0
DYD1_k127_4791719_6 PFAM Binding-protein-dependent transport K02033 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000422 303.0
DYD1_k127_4791719_7 Tetrapolymerization of the monopyrrole PBG into the hydroxymethylbilane pre-uroporphyrinogen in several discrete steps K01749 GO:0003674,GO:0003824,GO:0004418,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006464,GO:0006725,GO:0006778,GO:0006779,GO:0006782,GO:0006783,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009987,GO:0016740,GO:0016765,GO:0018065,GO:0018130,GO:0018160,GO:0018193,GO:0018198,GO:0019438,GO:0019538,GO:0033013,GO:0033014,GO:0034641,GO:0036211,GO:0042168,GO:0042440,GO:0043170,GO:0043412,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044424,GO:0044444,GO:0044464,GO:0046148,GO:0046483,GO:0046501,GO:0051186,GO:0051188,GO:0071704,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576 2.5.1.61 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000003591 293.0
DYD1_k127_4791719_8 Metal dependent phosphohydrolases with conserved 'HD' motif. - - - 0.0000000000000000000000000000000000000000000000000000000000000000000002419 243.0
DYD1_k127_4791719_9 Methyltransferase required for the conversion of demethylmenaquinol (DMKH2) to menaquinol (MKH2) K03183 - 2.1.1.163,2.1.1.201 0.0000000000000000000000000000000000000000000000000000000000000000000006849 244.0
DYD1_k127_4805610_0 TIGRFAM Polyketide-type polyunsaturated fatty acid synthase, PfaA K15314 - - 5.581e-250 789.0
DYD1_k127_4805610_1 ASPIC and UnbV K21162 - - 1.197e-229 731.0
DYD1_k127_4805610_2 electron transport chain K00347,K03614,K21162,K21163 - 1.6.5.8 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009049 374.0
DYD1_k127_4805610_3 Protein of unknown function (DUF1702) K21161 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000294 324.0
DYD1_k127_4805610_4 Response regulator receiver K02479 - - 0.000000000000000000000009764 109.0
DYD1_k127_4805610_5 KOW (Kyprides, Ouzounis, Woese) motif. K05785 - - 0.00000000000000824 83.0
DYD1_k127_4827699_0 Sugar (and other) transporter - - - 3.812e-211 668.0
DYD1_k127_4827699_1 Peptidase family M28 K06016 - 3.5.1.6,3.5.1.87 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003475 556.0
DYD1_k127_4827699_10 Glycosyltransferase like family 2 - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000028 284.0
DYD1_k127_4827699_11 pfam abc K01990 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000002077 263.0
DYD1_k127_4827699_12 Also displays a weak uracil phosphoribosyltransferase activity which is not physiologically significant K02825 - 2.4.2.9 0.0000000000000000000000000000000000000000000000000000000000000002446 226.0
DYD1_k127_4827699_13 Catalyzes the decarboxylation of orotidine 5'- monophosphate (OMP) to uridine 5'-monophosphate (UMP) K01591 - 4.1.1.23 0.000000000000000000000000000000000000000000000000000000000000428 219.0
DYD1_k127_4827699_14 Protein of unknown function DUF58 - - - 0.000000000000000000000000000000000000000000000000000000000004168 225.0
DYD1_k127_4827699_15 BON domain - - - 0.00000000000000000000000000000000000000000607 160.0
DYD1_k127_4827699_16 Glycosyl transferase, family 2 K07011 - - 0.00000000000000000000000000000000000000001082 166.0
DYD1_k127_4827699_17 Trypsin - - - 0.000000000008509 75.0
DYD1_k127_4827699_18 Protein of unknown function (DUF3108) - - - 0.000000002909 70.0
DYD1_k127_4827699_19 Protein of unknown function (DUF3108) - - - 0.00000008258 65.0
DYD1_k127_4827699_2 Belongs to the metallo-dependent hydrolases superfamily. DHOase family. Class I DHOase subfamily K01465 GO:0003674,GO:0003824,GO:0004038,GO:0004151,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006139,GO:0006144,GO:0006145,GO:0006220,GO:0006221,GO:0006725,GO:0006753,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0009056,GO:0009058,GO:0009112,GO:0009117,GO:0009165,GO:0009218,GO:0009220,GO:0009259,GO:0009260,GO:0009987,GO:0016787,GO:0016810,GO:0016812,GO:0018130,GO:0019438,GO:0019439,GO:0019637,GO:0019693,GO:0034641,GO:0034654,GO:0044237,GO:0044238,GO:0044248,GO:0044249,GO:0044270,GO:0044271,GO:0044281,GO:0044424,GO:0044464,GO:0046113,GO:0046390,GO:0046483,GO:0046700,GO:0055086,GO:0071704,GO:0072521,GO:0072523,GO:0072527,GO:0072528,GO:0090407,GO:1901135,GO:1901137,GO:1901293,GO:1901360,GO:1901361,GO:1901362,GO:1901564,GO:1901565,GO:1901566,GO:1901575,GO:1901576 3.5.2.3 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002745 479.0
DYD1_k127_4827699_20 Pfam:N_methyl_2 - - - 0.0000006915 57.0
DYD1_k127_4827699_3 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain K00609 GO:0003674,GO:0003824,GO:0004070,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006139,GO:0006220,GO:0006221,GO:0006725,GO:0006753,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009117,GO:0009165,GO:0009218,GO:0009220,GO:0009259,GO:0009260,GO:0009987,GO:0016740,GO:0016741,GO:0016743,GO:0018130,GO:0019438,GO:0019637,GO:0019693,GO:0034641,GO:0034654,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0044424,GO:0044464,GO:0046390,GO:0046483,GO:0055086,GO:0071704,GO:0072527,GO:0072528,GO:0090407,GO:1901135,GO:1901137,GO:1901293,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576 2.1.3.2 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001906 407.0
DYD1_k127_4827699_4 FAD dependent oxidoreductase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002065 409.0
DYD1_k127_4827699_5 ATPase family associated with various cellular activities (AAA) K03924 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001988 377.0
DYD1_k127_4827699_6 Catalyzes the irreversible transfer of a propylamine group from the amino donor S-adenosylmethioninamine (decarboxy- AdoMet) to putrescine (1,4-diaminobutane) to yield spermidine K00797 - 2.5.1.16 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003617 362.0
DYD1_k127_4827699_7 Catalyzes the conversion of dihydroorotate to orotate with quinone as electron acceptor K00254 - 1.3.5.2 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001806 342.0
DYD1_k127_4827699_8 protoporphyrinogen oxidase activity K00231,K14266 - 1.14.19.9,1.3.3.15,1.3.3.4 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004147 306.0
DYD1_k127_4827699_9 ABC-2 family transporter protein K01992 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000108 294.0
DYD1_k127_4840742_0 Catalyzes the attachment of L-aspartate to tRNA(Asp) in a two-step reaction L-aspartate is first activated by ATP to form Asp-AMP and then transferred to the acceptor end of tRNA(Asp) K01876 - 6.1.1.12 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001621 340.0
DYD1_k127_4840742_1 Peptidase family M48 - - - 0.0000000000000000000000000000000000000000000000512 186.0
DYD1_k127_4840742_2 Mov34 MPN PAD-1 family K21140 - 3.13.1.6 0.00000000000000000000008478 102.0
DYD1_k127_4861517_0 Diguanylate cyclase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002302 489.0
DYD1_k127_4861517_1 Dipeptidyl peptidase IV (DPP IV) K01278 - 3.4.14.5 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006488 326.0
DYD1_k127_4861517_2 Glucosamine-6-phosphate isomerases/6-phosphogluconolactonase K00851,K01057 GO:0003674,GO:0003824,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006081,GO:0006098,GO:0006139,GO:0006725,GO:0006732,GO:0006733,GO:0006739,GO:0006753,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0009051,GO:0009117,GO:0009987,GO:0016787,GO:0016788,GO:0017057,GO:0019362,GO:0019637,GO:0019682,GO:0019693,GO:0034641,GO:0044237,GO:0044238,GO:0044281,GO:0044424,GO:0044464,GO:0046483,GO:0046496,GO:0051156,GO:0051186,GO:0052689,GO:0055086,GO:0071704,GO:0072524,GO:1901135,GO:1901360,GO:1901564 2.7.1.12,3.1.1.31 0.0000000000000000000000000000000000000000000000005247 183.0
DYD1_k127_4861517_3 Putative cyclase - - - 0.0000000000000001206 79.0
DYD1_k127_4874379_0 Catalyzes the conversion of inosine 5'-phosphate (IMP) to xanthosine 5'-phosphate (XMP), the first committed and rate- limiting step in the de novo synthesis of guanine nucleotides, and therefore plays an important role in the regulation of cell growth K00088 - 1.1.1.205 3.701e-205 648.0
DYD1_k127_4874379_1 protease with the C-terminal PDZ domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002295 329.0
DYD1_k127_4874379_2 Threonyl and Alanyl tRNA synthetase second additional domain K01872 - 6.1.1.7 0.000000000000000000000000000000000000000000000000000000000000000000000000000000135 280.0
DYD1_k127_4874379_3 lipid kinase, YegS Rv2252 BmrU family - - - 0.000000000000000000000000000000000000000000000000000148 196.0
DYD1_k127_4874379_4 BMC - - - 0.00000000000000000000000000000000000009731 146.0
DYD1_k127_4874379_5 Helix-turn-helix domain K15539 - - 0.0000000000001242 78.0
DYD1_k127_4890863_0 Catalyzes the transfer of the enolpyruvyl moiety of phosphoenolpyruvate (PEP) to the 5-hydroxyl of shikimate-3- phosphate (S3P) to produce enolpyruvyl shikimate-3-phosphate and inorganic phosphate K00800 - 2.5.1.19 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001841 374.0
DYD1_k127_4890863_1 STAS domain K04749 - - 0.00000000000000000000000000000000000335 141.0
DYD1_k127_4890863_2 Belongs to the anti-sigma-factor antagonist family K04749 - - 0.0000000000000000000000000000000000197 138.0
DYD1_k127_4890863_3 Histidine kinase-like ATPase domain K04757 - 2.7.11.1 0.000000000000000000000000005615 114.0
DYD1_k127_4890863_4 phosphorelay signal transduction system K11443 - - 0.0000000000000000000002557 102.0
DYD1_k127_4890863_5 Catalyzes the specific phosphorylation of the 3-hydroxyl group of shikimic acid using ATP as a cosubstrate K00891 GO:0000287,GO:0003674,GO:0003824,GO:0004765,GO:0005488,GO:0006082,GO:0006520,GO:0006725,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0008652,GO:0009058,GO:0009072,GO:0009073,GO:0009987,GO:0016053,GO:0016301,GO:0016310,GO:0016740,GO:0016772,GO:0016773,GO:0019438,GO:0019632,GO:0019752,GO:0032787,GO:0043167,GO:0043169,GO:0043436,GO:0044237,GO:0044238,GO:0044249,GO:0044281,GO:0044283,GO:0046394,GO:0046872,GO:0071704,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576,GO:1901615 2.7.1.71 0.0000000000000000000005065 103.0
DYD1_k127_4890863_6 Uncharacterized protein conserved in bacteria (DUF2062) K09928 - - 0.000000000000000000005338 98.0
DYD1_k127_4890863_7 Biopterin-dependent aromatic amino acid hydroxylase K00500 - 1.14.16.1 0.0001032 45.0
DYD1_k127_4890863_8 Tetratricopeptide repeat - - - 0.0009719 52.0
DYD1_k127_4892046_0 Converts 2C-methyl-D-erythritol 2,4-cyclodiphosphate (ME-2,4cPP) into 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate K03526 - 1.17.7.1,1.17.7.3 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007992 427.0
DYD1_k127_4892046_1 Part of the ABC transporter complex PotABCD involved in spermidine putrescine import. Responsible for energy coupling to the transport system K02045 - 3.6.3.25 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000004701 291.0
DYD1_k127_4892046_2 Peptidase family M50 K11749 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000001117 274.0
DYD1_k127_4892046_3 Catalyzes the transfer of a dimethylallyl group onto the adenine at position 37 in tRNAs that read codons beginning with uridine, leading to the formation of N6-(dimethylallyl)adenosine (i(6)A) K00791 - 2.5.1.75 0.00000000000000000000000000000000000000000000000000000000000000000000008563 251.0
DYD1_k127_4892046_4 Sulfate ABC transporter substrate-binding protein K02048 - - 0.000000000000000000000000000000000000000000000000000000000000000000003905 247.0
DYD1_k127_4892046_5 Stage II sporulation protein K06381 - - 0.00000000000000000000000000000000000000000000000000000000000000003195 250.0
DYD1_k127_4892046_6 TIGRFAM sulfate ABC transporter, inner membrane subunit CysT K02046 - - 0.000000000000000000000000000000000000000000000000000009306 199.0
DYD1_k127_4892046_7 Phosphorylation of dTMP to form dTDP in both de novo and salvage pathways of dTTP synthesis K00943 - 2.7.4.9 0.0000000000000000000000000000000000000000000000006152 183.0
DYD1_k127_4892046_8 DNA polymerase III, delta' K02341 - 2.7.7.7 0.0000000000000000000000000000000000000000000008322 179.0
DYD1_k127_4892046_9 RNA chaperone that binds small regulatory RNA (sRNAs) and mRNAs to facilitate mRNA translational regulation in response to envelope stress, environmental stress and changes in metabolite concentrations. Also binds with high specificity to tRNAs K03666 - - 0.0000000000000000000008514 98.0
DYD1_k127_4901660_0 Carboxypeptidase regulatory-like domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000006622 263.0
DYD1_k127_4925002_0 Involved in the biosynthesis of the central metabolite phospho-alpha-D-ribosyl-1-pyrophosphate (PRPP) via the transfer of pyrophosphoryl group from ATP to 1-hydroxyl of ribose-5-phosphate (Rib-5-P) K00948 - 2.7.6.1 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001061 406.0
DYD1_k127_4925002_1 The natural substrate for this enzyme may be peptidyl- tRNAs which drop off the ribosome during protein synthesis K01056 - 3.1.1.29 0.000000000000000000000000000000000000000000000000001247 190.0
DYD1_k127_4925002_2 Catalyzes the phosphorylation of the position 2 hydroxy group of 4-diphosphocytidyl-2C-methyl-D-erythritol K00919 GO:0003674,GO:0003824,GO:0006793,GO:0006796,GO:0008150,GO:0008152,GO:0009987,GO:0016301,GO:0016310,GO:0016740,GO:0016772,GO:0016773,GO:0044237,GO:0050515 2.7.1.148 0.00000000000000000000000000000000000000000000000007061 188.0
DYD1_k127_4925002_3 This is one of the proteins that binds to the 5S RNA in the ribosome where it forms part of the central protuberance K02897 - - 0.000000000000000000000000000000000000000001889 164.0
DYD1_k127_4925002_4 binds to the 23S rRNA K02939 - - 0.000000000000000000000000000000000000001387 154.0
DYD1_k127_4925002_5 Binds as a heterodimer with protein S6 to the central domain of the 16S rRNA, where it helps stabilize the platform of the 30S subunit K02963 - - 0.00000000000000000000000002893 112.0
DYD1_k127_4925002_6 Binds together with S18 to 16S ribosomal RNA K02990 - - 0.00000000000000000008035 95.0
DYD1_k127_4925002_7 protein with SCP PR1 domains - - - 0.000000000000000002475 92.0
DYD1_k127_4925002_8 - - - - 0.0000355 51.0
DYD1_k127_4945134_0 alcohol dehydrogenase K00008 - 1.1.1.14 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000382 469.0
DYD1_k127_4945134_1 Aldehyde dehydrogenase family K00141,K22187 - 1.2.1.28 0.0000000000000000000000000000000000000000000000000000000000000000000002649 244.0
DYD1_k127_4945134_2 Polyketide cyclase / dehydrase and lipid transport - - - 0.0000000000000000000000000000000000000000001771 167.0
DYD1_k127_4948186_0 PFAM phosphate transporter K03306 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001585 388.0
DYD1_k127_4948186_1 Tetratricopeptide repeat - - - 0.0000000000000000000000000000000000000001213 173.0
DYD1_k127_4948186_2 COG2931 RTX toxins and related Ca2 -binding proteins - - - 0.0001455 55.0
DYD1_k127_4953786_0 Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain K00256 - 1.3.99.16 1.854e-250 792.0
DYD1_k127_4953786_1 von Willebrand factor, type A K07114 - - 4.684e-214 683.0
DYD1_k127_4953786_2 FAD binding domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002719 538.0
DYD1_k127_4953786_3 phosphorelay signal transduction system - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004328 378.0
DYD1_k127_4953786_4 Glycosyltransferase family 28 N-terminal domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008654 361.0
DYD1_k127_4953786_5 PFAM OsmC family protein K04063 - - 0.0000000000000000000000000000000000000000000000001666 181.0
DYD1_k127_4953786_6 Sugar transferase K19428 - - 0.000000000000000000000000004903 121.0
DYD1_k127_4953786_7 Pfam Adenylate and Guanylate cyclase catalytic domain K01768 - 4.6.1.1 0.00000000000000000000003122 103.0
DYD1_k127_4953786_8 Recombinase zinc beta ribbon domain - - - 0.000000000002345 70.0
DYD1_k127_4964508_0 Aspartyl-tRNA synthetase with relaxed tRNA specificity since it is able to aspartylate not only its cognate tRNA(Asp) but also tRNA(Asn). Reaction proceeds in two steps L-aspartate is first activated by ATP to form Asp-AMP and then transferred to the acceptor end of tRNA(Asp Asn) K01876 - 6.1.1.12 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005706 499.0
DYD1_k127_4964508_1 PFAM tRNA synthetase class II (G H P and S) K01892 - 6.1.1.21 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009393 460.0
DYD1_k127_4964508_2 Protein of unknown function (DUF1572) - - - 0.000000000000000000000000000000000000000000000000000000000006218 211.0
DYD1_k127_4964508_3 Bacterial transferase hexapeptide (six repeats) - - - 0.0000000000000000000000000000000000000000000000000002091 192.0
DYD1_k127_4973704_0 ABC transporter K10441 - 3.6.3.17 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005167 591.0
DYD1_k127_4973704_1 Catalyzes the isomerization between 2-isopropylmalate and 3-isopropylmalate, via the formation of 2-isopropylmaleate K01703 - 4.2.1.33,4.2.1.35 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005245 548.0
DYD1_k127_4973704_10 Uncharacterised nucleotidyltransferase - - - 0.00000000000000000000000000000000000000000000000000000001496 214.0
DYD1_k127_4973704_11 Coenzyme PQQ synthesis protein D (PqqD) - - - 0.0000000000000000000002003 99.0
DYD1_k127_4973704_12 Peptidase dimerisation domain K01438 - 3.5.1.16 0.000000000000000004379 88.0
DYD1_k127_4973704_2 Amidohydrolase family K05603 - 3.5.3.13 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001353 477.0
DYD1_k127_4973704_3 Asparagine synthase K01953 - 6.3.5.4 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003598 404.0
DYD1_k127_4973704_4 Belongs to the GHMP kinase family. GalK subfamily K00849 - 2.7.1.6 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002452 385.0
DYD1_k127_4973704_5 D12 class N6 adenine-specific DNA methyltransferase K06223 - 2.1.1.72 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000285 343.0
DYD1_k127_4973704_6 PRMT5 arginine-N-methyltransferase K11434 - 2.1.1.319 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002908 342.0
DYD1_k127_4973704_7 Nucleotidyl transferase K00973 - 2.7.7.24 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000001814 298.0
DYD1_k127_4973704_8 Aconitase C-terminal domain K01704 - 4.2.1.33,4.2.1.35 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000001162 282.0
DYD1_k127_4973704_9 HPr kinase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000005501 261.0
DYD1_k127_4997433_0 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000769 442.0
DYD1_k127_4997433_1 radical SAM domain protein K04070 - 1.97.1.4 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008549 362.0
DYD1_k127_4997433_2 Homoserine dehydrogenase, NAD binding domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000184 293.0
DYD1_k127_4997433_3 Methyladenine glycosylase K01246 - 3.2.2.20 0.00000000000000000000000000000000000000000000000000000000000000000000000000008507 261.0
DYD1_k127_4997433_4 helix_turn_helix gluconate operon transcriptional repressor K07978 - - 0.000000000000000000000000000000000000000000000000000000000000000000000009148 252.0
DYD1_k127_4997433_5 Xylose isomerase-like TIM barrel K06606 - 5.3.99.11 0.0000000000000000000000000000000000000000000000000001911 193.0
DYD1_k127_4997433_6 Cupin 2, conserved barrel domain protein - - - 0.000000000000000000000001899 112.0
DYD1_k127_4997433_7 YCII-related domain - - - 0.0000000000000000000006176 103.0
DYD1_k127_4997433_8 Cytochrome C oxidase, cbb3-type, subunit III - - - 0.000000000000001385 83.0
DYD1_k127_5034860_0 X-Pro dipeptidyl-peptidase C-terminal non-catalytic domain K06978 - - 3.941e-261 814.0
DYD1_k127_5034860_1 pfam abc K01990 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001443 321.0
DYD1_k127_5034860_2 Diguanylate cyclase - - - 0.00000000000000000000001441 114.0
DYD1_k127_5040791_0 Sodium:solute symporter family - - - 9.964e-201 639.0
DYD1_k127_5040791_1 competence protein COMEC - - - 0.0000000000000000000000000000000001087 139.0
DYD1_k127_5046980_0 Flavin containing amine oxidoreductase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004162 595.0
DYD1_k127_5046980_1 Molybdopterin oxidoreductase Fe4S4 domain K00123 - 1.17.1.9 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001414 318.0
DYD1_k127_5046980_2 SNARE associated Golgi protein K01077 - 3.1.3.1 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000001259 286.0
DYD1_k127_5046980_3 Catalyzes the methyl esterification of L-isoaspartyl residues in peptides and proteins that result from spontaneous decomposition of normal L-aspartyl and L-asparaginyl residues. It plays a role in the repair and or degradation of damaged proteins K00573 - 2.1.1.77 0.0000000000000000000000000000000000000000000000000000000000000000008162 235.0
DYD1_k127_5046980_4 protein involved in formate dehydrogenase formation K02380 - - 0.00000000000000000000000000000000000357 149.0
DYD1_k127_5046980_5 Molydopterin dinucleotide binding domain K00123 - 1.17.1.9 0.000000000000000000000003462 101.0
DYD1_k127_5088971_0 MacB-like periplasmic core domain - - - 1.935e-216 699.0
DYD1_k127_5088971_1 efflux transmembrane transporter activity - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008272 571.0
DYD1_k127_5088971_2 efflux transmembrane transporter activity - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003719 358.0
DYD1_k127_5091086_0 Radical SAM - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001077 459.0
DYD1_k127_5091086_1 Belongs to the pyruvate kinase family K00873 - 2.7.1.40 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001587 408.0
DYD1_k127_5091086_10 Domain of unknown function (DUF2088) - - - 0.000000000000000000000000001257 115.0
DYD1_k127_5091086_11 Glutathione peroxidase K02199 - - 0.0000000000000000000000001474 115.0
DYD1_k127_5091086_12 - catabolite gene activator and regulatory subunit of cAMP-dependent protein K10914 - - 0.000000000000000000000003284 111.0
DYD1_k127_5091086_13 Inhibits all the catalytic activities of DNA gyrase by preventing its interaction with DNA. Acts by binding directly to the C-terminal domain of GyrB, which probably disrupts DNA binding by the gyrase K09862 - - 0.00000000000002505 78.0
DYD1_k127_5091086_15 Participates in the translocation of lipoproteins from the inner membrane to the outer membrane. Only forms a complex with a lipoprotein if the residue after the N-terminal Cys is not an aspartate (The Asp acts as a targeting signal to indicate that the lipoprotein should stay in the inner membrane) - - - 0.000001078 60.0
DYD1_k127_5091086_2 ABC transporter K02003 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000005669 272.0
DYD1_k127_5091086_3 SIR2-like domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000004162 254.0
DYD1_k127_5091086_4 PFAM GGDEF domain containing protein K21020 - 2.7.7.65 0.00000000000000000000000000000000000000000000000000000000001231 220.0
DYD1_k127_5091086_5 Acetyltransferase (GNAT) domain - - - 0.000000000000000000000000000000000000000000000000002924 188.0
DYD1_k127_5091086_6 HD domain K07023 - - 0.0000000000000000000000000000000000001738 148.0
DYD1_k127_5091086_7 - - - - 0.00000000000000000000000000000001216 128.0
DYD1_k127_5091086_8 Domain of unknown function (DUF4258) - - - 0.000000000000000000000000000009062 120.0
DYD1_k127_5091086_9 - - - - 0.00000000000000000000000000007636 121.0
DYD1_k127_5117032_0 Domain of Unknown Function with PDB structure (DUF3857) - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000446 456.0
DYD1_k127_5117032_1 VIT family - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002604 302.0
DYD1_k127_5117032_2 TonB-dependent receptor K02014 - - 0.000000000000000000000000000005515 138.0
DYD1_k127_5117032_3 membrane - - - 0.0004132 43.0
DYD1_k127_5119333_0 Belongs to the KdsA family K01627 - 2.5.1.55 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007481 355.0
DYD1_k127_5119333_1 DEAD DEAH box helicase - - - 0.0000000000000000000000000000000000001206 149.0
DYD1_k127_5119333_2 Peptidase family M1 domain - - - 0.00001439 58.0
DYD1_k127_5129220_0 Catalyzes the ATP-dependent amidation of deamido-NAD to form NAD. Uses L-glutamine as a nitrogen source K01950 - 6.3.5.1 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002731 464.0
DYD1_k127_5129220_1 Domain of unknown function (DUF4433) - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000137 259.0
DYD1_k127_5130223_0 PFAM Type II secretion system protein E K02652 - - 2.857e-217 689.0
DYD1_k127_5130223_1 PFAM Type II secretion system F domain K02653 - - 0.00000000000000000000000000000000000000000000000000000000000000000000009949 256.0
DYD1_k127_5130223_2 von Willebrand factor (vWF) type A domain K07114 - - 0.00000000000000000003869 98.0
DYD1_k127_5130223_3 type II and III secretion system protein K02453 - - 0.00000000000001488 85.0
DYD1_k127_5132443_0 xanthine dehydrogenase activity K04108 - 1.3.7.9 1.513e-303 953.0
DYD1_k127_5132443_1 2Fe-2S -binding domain protein K03518 - 1.2.5.3 0.0000000000000000000000000000000000000000000000000000000000000003089 224.0
DYD1_k127_5132443_2 Catalyzes the condensation of pantoate with beta-alanine in an ATP-dependent reaction via a pantoyl-adenylate intermediate K01918 - 6.3.2.1 0.000000000000000000000000000003059 123.0
DYD1_k127_5132443_3 CO dehydrogenase flavoprotein K03519 - 1.2.5.3 0.000004425 49.0
DYD1_k127_5134960_0 Electron transfer flavoprotein FAD-binding domain K03522 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004662 362.0
DYD1_k127_5134960_1 Copper binding periplasmic protein CusF K07152 - - 0.0000000000000000000000000000000000000000000000000000004291 205.0
DYD1_k127_5134960_2 Catalyzes the oxidation of 5,10- methylenetetrahydrofolate to 5,10-methenyltetrahydrofolate and then the hydrolysis of 5,10-methenyltetrahydrofolate to 10- formyltetrahydrofolate K01491 - 1.5.1.5,3.5.4.9 0.000000000000000000000000000000000000000000000009475 176.0
DYD1_k127_5134960_3 Lytic transglycosylase catalytic K08309 - - 0.0000000000000000000000000001544 134.0
DYD1_k127_5134960_4 Mediates coordination of peptidoglycan synthesis and outer membrane constriction during cell division - - - 0.0001107 55.0
DYD1_k127_5152610_0 PD-(D/E)XK nuclease superfamily K16898 - 3.6.4.12 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001089 407.0
DYD1_k127_5152610_1 The heterodimer acts as both an ATP-dependent DNA helicase and an ATP-dependent, dual-direction single-stranded exonuclease. Recognizes the chi site generating a DNA molecule suitable for the initiation of homologous recombination K16899 - 3.6.4.12 0.00000000000000000000000000000000001562 153.0
DYD1_k127_5167227_0 Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain K00256 - 1.3.99.16 2.455e-243 769.0
DYD1_k127_5167227_1 Trehalase K01194 - 3.2.1.28 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000033 614.0
DYD1_k127_5204541_0 xylose isomerase activity K01805 GO:0003674,GO:0003824,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005975,GO:0005996,GO:0008150,GO:0008152,GO:0009045,GO:0009056,GO:0016052,GO:0016853,GO:0016860,GO:0016861,GO:0019321,GO:0019323,GO:0042732,GO:0042843,GO:0044238,GO:0044281,GO:0044282,GO:0044424,GO:0044464,GO:0046365,GO:0071704,GO:1901575 5.3.1.5 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001457 559.0
DYD1_k127_5204541_1 Histidine kinase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003789 529.0
DYD1_k127_5204541_2 Response regulator receiver - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001269 359.0
DYD1_k127_5204541_3 Belongs to the glycosyl hydrolase 3 family K05349 - 3.2.1.21 0.000000000000000000000000000000000000000000000000000000000000000000001471 240.0
DYD1_k127_5240615_0 Carboxypeptidase regulatory-like domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000183 317.0
DYD1_k127_5240615_1 Low molecular weight phosphatase family K03741 - 1.20.4.1 0.000000000000000000000000000000000000000000000000002791 184.0
DYD1_k127_5240615_2 helix_turn_helix, Arsenical Resistance Operon Repressor K03892 - - 0.00000000000000000000000000000000000001148 153.0
DYD1_k127_5242310_0 PFAM ABC transporter related K06020 - 3.6.3.25 1.048e-303 938.0
DYD1_k127_5242310_1 CarboxypepD_reg-like domain - - - 1.147e-229 757.0
DYD1_k127_5242310_2 beta-propeller repeat - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004248 436.0
DYD1_k127_5242310_3 May be involved in recombinational repair of damaged DNA K03631 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002476 406.0
DYD1_k127_5242310_4 protein with SCP PR1 domains - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000506 358.0
DYD1_k127_5242310_5 Belongs to the peptidase S41A family K03797 - 3.4.21.102 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008594 332.0
DYD1_k127_5242310_6 Protein conserved in bacteria - - - 0.0000000000000006536 92.0
DYD1_k127_5242310_7 Bacterial regulatory proteins, tetR family - - - 0.000000000001748 75.0
DYD1_k127_5242310_8 TonB-dependent Receptor Plug Domain - - - 0.0005221 45.0
DYD1_k127_52593_0 chaperone-mediated protein folding - - - 0.000000000000000000000000000000000000000000003434 181.0
DYD1_k127_52593_1 PFAM glycosyl transferase family 39 - - - 0.0000000000000000000000000000000000000005985 168.0
DYD1_k127_52593_2 Required for chromosome condensation and partitioning K03529 - - 0.00000000000000000000000002043 109.0
DYD1_k127_5267164_0 TIGRFAM asparagine synthase (glutamine-hydrolyzing) K01953 - 6.3.5.4 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007204 521.0
DYD1_k127_5267164_1 Glycosyl transferase 4-like domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000001413 294.0
DYD1_k127_5267164_2 Membrane protein involved in the export of O-antigen and teichoic acid - - - 0.0000000000000001281 93.0
DYD1_k127_5267164_3 3-demethylubiquinone-9 3-O-methyltransferase activity - - - 0.000000000000000888 81.0
DYD1_k127_5278585_0 Belongs to the class-II aminoacyl-tRNA synthetase family K04567 - 6.1.1.6 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000062 461.0
DYD1_k127_5278585_1 Exopolysaccharide biosynthesis polyprenyl glycosylphosphotransferase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004388 398.0
DYD1_k127_5278585_2 Photosynthesis system II assembly factor YCF48 - - - 0.0000000000000000000000000000000000000000000000003597 188.0
DYD1_k127_5278585_3 Catalyzes the ADP transfer from ATP to D-glycero-beta-D- manno-heptose 1-phosphate, yielding ADP-D-glycero-beta-D-manno- heptose - - - 0.0000000000000000000000000000000000000000000001439 172.0
DYD1_k127_5278585_4 Capsular exopolysaccharide family K08252 - 2.7.10.1 0.0000000000000000000000000000000000000000003706 170.0
DYD1_k127_5278585_5 PFAM Polysaccharide export protein K01991 - - 0.000000000000000001073 94.0
DYD1_k127_5278585_6 Source PGD - - - 0.00000001629 67.0
DYD1_k127_5278585_7 Couples transcription and DNA repair by recognizing RNA polymerase (RNAP) stalled at DNA lesions. Mediates ATP-dependent release of RNAP and its truncated transcript from the DNA, and recruitment of nucleotide excision repair machinery to the damaged site K03723 - - 0.0002437 51.0
DYD1_k127_5289800_0 Bifunctional enzyme that catalyzes the epimerization of the S- and R-forms of NAD(P)HX and the dehydration of the S-form of NAD(P)HX at the expense of ADP, which is converted to AMP. This allows the repair of both epimers of NAD(P)HX, a damaged form of NAD(P)H that is a result of enzymatic or heat-dependent hydration K17758,K17759 - 4.2.1.136,5.1.99.6 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004113 349.0
DYD1_k127_5289800_1 Disulphide isomerase - - - 0.00000000000000000000000000000000000000000000000000000002483 199.0
DYD1_k127_5289800_2 - - - - 0.000000000000000000000000000001418 125.0
DYD1_k127_5289800_3 ATPase or kinase K06925 GO:0002949,GO:0006139,GO:0006396,GO:0006399,GO:0006400,GO:0006725,GO:0006807,GO:0008033,GO:0008150,GO:0008152,GO:0009451,GO:0009987,GO:0010467,GO:0016070,GO:0034470,GO:0034641,GO:0034660,GO:0043170,GO:0043412,GO:0044237,GO:0044238,GO:0046483,GO:0070525,GO:0071704,GO:0090304,GO:1901360 - 0.0000000000000000000000117 106.0
DYD1_k127_5289800_4 PEP-CTERM motif - - - 0.00000676 57.0
DYD1_k127_5293763_0 MacB-like periplasmic core domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002471 591.0
DYD1_k127_5293763_1 efflux transmembrane transporter activity K02004 - - 0.0000000000000006654 79.0
DYD1_k127_5293763_2 MacB-like periplasmic core domain - - - 0.000001602 51.0
DYD1_k127_5302222_0 Catalyzes the activation of phenylacetic acid (PA) to phenylacetyl-CoA (PA-CoA) - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004542 464.0
DYD1_k127_5302222_1 cAMP biosynthetic process K12132 - 2.7.11.1 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005356 492.0
DYD1_k127_5302222_10 Gas vesicles are small, hollow, gas filled protein structures that are found in several microbial planktonic microorganisms. They allow the positioning of the organism at the favorable depth for growth. GvpA type proteins form the essential core of the structure - - - 0.0000000000000000000000000000006875 123.0
DYD1_k127_5302222_11 Gas vesicle protein K - - - 0.00000000000000000000000000007593 119.0
DYD1_k127_5302222_12 Gas vesicles are small, hollow, gas filled protein structures that are found in several microbial planktonic microorganisms. They allow the positioning of the organism at the favorable depth for growth - - - 0.0000000000000000000000001098 112.0
DYD1_k127_5302222_13 Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released. This sigma factor is the primary sigma factor during exponential growth K03086 - - 0.0000000000000000000000007204 111.0
DYD1_k127_5302222_14 Gas vesicle synthesis protein GvpL/GvpF - - - 0.000000000000000000001365 103.0
DYD1_k127_5302222_15 gas vesicle protein - - - 0.000000000008742 67.0
DYD1_k127_5302222_2 PFAM Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005625 358.0
DYD1_k127_5302222_3 CHASE3 domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001393 363.0
DYD1_k127_5302222_4 Transcriptional regulatory protein, C terminal - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000002354 293.0
DYD1_k127_5302222_5 ECF sigma factor - - - 0.000000000000000000000000000000000000000000000000000000000000004366 221.0
DYD1_k127_5302222_6 Aldehyde dehydrogenase family - - - 0.00000000000000000000000000000000000002424 148.0
DYD1_k127_5302222_7 peptidyl-tyrosine sulfation - - - 0.00000000000000000000000000000000000006223 167.0
DYD1_k127_5302222_8 Gas vesicle synthesis protein GvpL/GvpF - - - 0.00000000000000000000000000000000000373 148.0
DYD1_k127_5302222_9 Transcriptional regulator - - - 0.00000000000000000000000000000009678 130.0
DYD1_k127_5316472_0 Subtilase family - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003941 344.0
DYD1_k127_53284_0 PFAM peptidase - - - 4.308e-197 628.0
DYD1_k127_53284_1 ThiC-associated domain K03147 GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006725,GO:0006766,GO:0006767,GO:0006772,GO:0006790,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009110,GO:0009228,GO:0009987,GO:0017144,GO:0018130,GO:0019438,GO:0034641,GO:0042364,GO:0042723,GO:0042724,GO:0044237,GO:0044249,GO:0044271,GO:0044272,GO:0044281,GO:0044283,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0071704,GO:0072527,GO:0072528,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576 4.1.99.17 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002149 564.0
DYD1_k127_5349080_0 Amidohydrolase family - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005999 526.0
DYD1_k127_5349080_1 Histidine kinase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006406 353.0
DYD1_k127_5349080_2 Pfam:KaiC K08482 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003616 329.0
DYD1_k127_5349080_3 Belongs to the aldehyde dehydrogenase family K00141,K22187 - 1.2.1.28 0.000000000000000000000000000000000000000000000000000005537 192.0
DYD1_k127_5349080_4 PFAM KaiB domain K08481 - - 0.0000000000000000000000000000000000000009621 151.0
DYD1_k127_5349080_5 PFAM KaiB domain protein K08481 - - 0.0000000000000000000000000002402 119.0
DYD1_k127_5376807_0 Methionine synthase K00548 GO:0000096,GO:0000097,GO:0003674,GO:0003824,GO:0005575,GO:0005618,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005886,GO:0006082,GO:0006520,GO:0006555,GO:0006790,GO:0006807,GO:0008150,GO:0008152,GO:0008168,GO:0008172,GO:0008652,GO:0008705,GO:0009058,GO:0009066,GO:0009067,GO:0009086,GO:0009987,GO:0016020,GO:0016053,GO:0016740,GO:0016741,GO:0019752,GO:0030312,GO:0032259,GO:0042084,GO:0043436,GO:0044237,GO:0044238,GO:0044249,GO:0044272,GO:0044281,GO:0044283,GO:0044424,GO:0044444,GO:0044464,GO:0046394,GO:0071704,GO:0071944,GO:1901564,GO:1901566,GO:1901576,GO:1901605,GO:1901607 2.1.1.13 0.0000000000000000000000000000000000000000000000000000000000000000000000008315 250.0
DYD1_k127_5376807_1 Sphingosine kinase and enzymes related to eukaryotic diacylglycerol kinase - - - 0.0000000000000000000000000000000000000000000000000000000000000000004568 240.0
DYD1_k127_5376807_2 Phosphate acyltransferases K00655 - 2.3.1.51 0.000000000000000000000000000000000001293 147.0
DYD1_k127_5376807_3 Heat shock protein DnaJ domain protein - - - 0.00000000000000000000000000000002896 134.0
DYD1_k127_5384473_0 Mycothiol maleylpyruvate isomerase N-terminal domain - - - 0.00000000000000000000000000000000000000000000000000000000000001227 220.0
DYD1_k127_5384473_1 Ankyrin repeat K06867 - - 0.000000000845 69.0
DYD1_k127_5384473_2 PDZ domain (Also known as DHR or GLGF) - - - 0.0006856 52.0
DYD1_k127_5404425_0 Peptidase dimerisation domain K01436 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003143 499.0
DYD1_k127_5404425_1 DinB family - - - 0.000000000000000000000000000000000000229 149.0
DYD1_k127_5404425_2 - - - - 0.000000000008746 65.0
DYD1_k127_5404425_3 transcriptional regulator - - - 0.0000003471 57.0
DYD1_k127_5409298_0 ABC transporter K02003 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002624 305.0
DYD1_k127_5409298_1 Barrel-sandwich domain of CusB or HlyD membrane-fusion K02005,K13888 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000007643 303.0
DYD1_k127_5409298_2 Sigma-70, region 4 - - - 0.00000000000000000000000000003258 124.0
DYD1_k127_5409298_3 ATP-independent chaperone mediated protein folding - - - 0.00001018 53.0
DYD1_k127_5409298_4 ATP-independent chaperone mediated protein folding K06006 - - 0.0000657 53.0
DYD1_k127_542317_0 Radical SAM enzyme that catalyzes the cyclization of dehypoxanthine futalosine (DHFL) into cyclic dehypoxanthine futalosine (CDHFL), a step in the biosynthesis of menaquinone (MK, vitamin K2) K11784 - 1.21.98.1 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004689 433.0
DYD1_k127_542317_1 Ribonuclease E/G family K08301 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004442 420.0
DYD1_k127_542317_2 Putative cyclase K07130 - 3.5.1.9 0.00000000000000000000000000000000000000000000000000374 190.0
DYD1_k127_542317_3 Catalyzes the dehydration of chorismate into 3- (1- carboxyvinyl)oxy benzoate, a step in the biosynthesis of menaquinone (MK, vitamin K2) K11782 - 4.2.1.151 0.0000000000000000000000000000000000000000000004348 177.0
DYD1_k127_542317_4 Putative heavy-metal-binding - - - 0.00000000000000000000000000000000000000000001216 166.0
DYD1_k127_542317_5 PFAM Methylated-DNA- protein -cysteine S-methyltransferase DNA binding K07443 - - 0.000000000000000003093 89.0
DYD1_k127_5436031_0 Succinyl-CoA synthetase functions in the citric acid cycle (TCA), coupling the hydrolysis of succinyl-CoA to the synthesis of either ATP or GTP and thus represents the only step of substrate-level phosphorylation in the TCA. The beta subunit provides nucleotide specificity of the enzyme and binds the substrate succinate, while the binding sites for coenzyme A and phosphate are found in the alpha subunit K01903 - 6.2.1.5 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004301 547.0
DYD1_k127_5436031_1 Cys/Met metabolism PLP-dependent enzyme K00812 - 2.6.1.1 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002149 492.0
DYD1_k127_5436031_2 Beta-Casp domain K07576 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006874 437.0
DYD1_k127_5436031_3 GrpB protein - - - 0.00000000000000000000000000000000000000002063 158.0
DYD1_k127_5436031_4 OsmC-like protein K06889,K07397 - - 0.000000000000000000000000000000000000009271 149.0
DYD1_k127_5436031_5 - - - - 0.0000000000000000000000001189 113.0
DYD1_k127_5436031_6 regulatory protein, MerR - - - 0.000000000000000000000001056 110.0
DYD1_k127_5436031_7 Domain of unknown function (DU1801) - - - 0.00000000000000000000008042 102.0
DYD1_k127_5436031_8 Catalyzes the ATP-dependent phosphorylation of thiamine- monophosphate (TMP) to form thiamine-pyrophosphate (TPP), the active form of vitamin B1 K00946 - 2.7.4.16 0.00000000000000000001118 94.0
DYD1_k127_5461298_0 FtsX-like permease family - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004193 468.0
DYD1_k127_5461298_1 PFAM Glycosyl transferase, group 1 - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004012 353.0
DYD1_k127_5461298_2 Aldehyde dehydrogenase family - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000008146 284.0
DYD1_k127_5461298_3 Part of the ABC transporter complex LolCDE involved in the translocation of mature outer membrane-directed lipoproteins, from the inner membrane to the periplasmic chaperone, LolA. Responsible for the formation of the LolA-lipoprotein complex in an ATP-dependent manner K02003,K09810 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000002305 263.0
DYD1_k127_5472643_0 Cytochrome C biogenesis protein transmembrane region K06196 - - 0.000000000000000000000000000000000000000000000000000000462 208.0
DYD1_k127_5472643_1 cell redox homeostasis K22278 - 3.5.1.104 0.0000000000000000000002533 109.0
DYD1_k127_5472643_2 Thioredoxin-like - - - 0.000000000000000001345 98.0
DYD1_k127_5482423_0 UDP binding domain K00066 - 1.1.1.132 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004434 553.0
DYD1_k127_5482423_1 PFAM Glycosyl transferase, group 1 - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001078 334.0
DYD1_k127_5482423_2 Asparagine synthase K01953 - 6.3.5.4 0.000000000000000000000000000000000000000000000000000000000000000000000000000000006166 281.0
DYD1_k127_5482423_3 Attaches a formyl group to the free amino group of methionyl-tRNA(fMet). The formyl group appears to play a dual role in the initiator identity of N-formylmethionyl-tRNA by promoting its recognition by IF2 and preventing the misappropriation of this tRNA by the elongation apparatus - - - 0.00000000000000000000000000000000000000000000000000000005291 209.0
DYD1_k127_5485299_0 Nucleotidyl transferase - - - 0.000000000000000000000000000000000000000000001595 174.0
DYD1_k127_5485299_1 Membrane protein involved in the export of O-antigen and teichoic acid - - - 0.0000000000003756 79.0
DYD1_k127_5491213_0 Oligopeptide/dipeptide transporter, C-terminal region - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002479 389.0
DYD1_k127_5493992_0 Non-ribosomal peptide synthetase modules and related - - - 0.0 1204.0
DYD1_k127_5493992_1 - - - - 0.000001772 52.0
DYD1_k127_5506842_0 Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family K00821 - 2.6.1.11,2.6.1.17 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001944 318.0
DYD1_k127_5506842_1 Belongs to the ATCase OTCase family K09065 GO:0000050,GO:0003674,GO:0003824,GO:0004585,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006082,GO:0006520,GO:0006525,GO:0006526,GO:0006591,GO:0006807,GO:0008150,GO:0008152,GO:0008652,GO:0009058,GO:0009064,GO:0009084,GO:0009987,GO:0016053,GO:0016740,GO:0016741,GO:0016743,GO:0019627,GO:0019752,GO:0034641,GO:0042450,GO:0043436,GO:0043603,GO:0043604,GO:0043857,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0044283,GO:0044424,GO:0044464,GO:0046394,GO:0071704,GO:0071941,GO:1901564,GO:1901566,GO:1901576,GO:1901605,GO:1901607 2.1.3.9 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002623 309.0
DYD1_k127_5506842_2 Catalyzes the NADPH-dependent reduction of N-acetyl-5- glutamyl phosphate to yield N-acetyl-L-glutamate 5-semialdehyde K00145 - 1.2.1.38 0.000000000000000000000000000000000000000000000000000000000000000000005614 243.0
DYD1_k127_5506842_3 Belongs to the acetylglutamate kinase family. ArgB subfamily K00930 GO:0003674,GO:0003824,GO:0003991,GO:0005488,GO:0005575,GO:0005618,GO:0005623,GO:0005886,GO:0006082,GO:0006520,GO:0006525,GO:0006526,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0008652,GO:0009058,GO:0009064,GO:0009084,GO:0009987,GO:0016020,GO:0016053,GO:0016301,GO:0016310,GO:0016597,GO:0016740,GO:0016772,GO:0016774,GO:0019752,GO:0030312,GO:0031406,GO:0034618,GO:0036094,GO:0040007,GO:0043167,GO:0043168,GO:0043169,GO:0043177,GO:0043436,GO:0044237,GO:0044238,GO:0044249,GO:0044281,GO:0044283,GO:0044464,GO:0046394,GO:0071704,GO:0071944,GO:1901564,GO:1901566,GO:1901576,GO:1901605,GO:1901607 2.7.2.8 0.00000000000000000000000001547 114.0
DYD1_k127_5512085_0 GTPase that associates with the 50S ribosomal subunit and may have a role during protein synthesis or ribosome biogenesis K03665 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003329 485.0
DYD1_k127_5512085_1 7TM receptor with intracellular HD hydrolase K07037 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003515 353.0
DYD1_k127_5512085_2 pyrroloquinoline quinone binding - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000006885 284.0
DYD1_k127_5512085_3 PFAM Histidine triad (HIT) protein K19710 - 2.7.7.53 0.00000000000000000000000000000000000000000000000004469 183.0
DYD1_k127_5512085_4 Histone-like DNA-binding protein which is capable of wrapping DNA to stabilize it, and thus to prevent its denaturation under extreme environmental conditions K05788 - - 0.0000000000000000000000000000000698 127.0
DYD1_k127_5512085_5 Peptidase family M50 K06402 - - 0.000000000000000000000000004645 115.0
DYD1_k127_553196_0 TonB dependent receptor - - - 8.773e-203 679.0
DYD1_k127_553196_1 FAD binding domain - - - 0.0000000000000001886 90.0
DYD1_k127_553196_2 Tetratricopeptide repeat - - - 0.000000003198 69.0
DYD1_k127_5546796_0 Tetratricopeptide repeat - - - 0.000000000000000000000000000000000000000000000000000000004358 224.0
DYD1_k127_5546796_1 PPIases accelerate the folding of proteins. It catalyzes the cis-trans isomerization of proline imidic peptide bonds in oligopeptides K01802,K03767,K03768 - 5.2.1.8 0.0000000000000000000000000000000000000000000000002678 181.0
DYD1_k127_5546796_2 phosphomethylpyrimidine kinase K00941,K14153 - 2.5.1.3,2.7.1.49,2.7.4.7 0.000000000000000000000000000000000000000000000001159 183.0
DYD1_k127_5546796_3 CHRD domain - - - 0.000000000000000000000000000000000000002211 154.0
DYD1_k127_5546796_4 Condenses 4-methyl-5-(beta-hydroxyethyl)thiazole monophosphate (THZ-P) and 2-methyl-4-amino-5-hydroxymethyl pyrimidine pyrophosphate (HMP-PP) to form thiamine monophosphate (TMP) K00788 GO:0003674,GO:0003824,GO:0004789,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006725,GO:0006766,GO:0006767,GO:0006772,GO:0006790,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009110,GO:0009228,GO:0009987,GO:0016740,GO:0016765,GO:0017144,GO:0018130,GO:0019438,GO:0034641,GO:0042364,GO:0042723,GO:0042724,GO:0044237,GO:0044249,GO:0044271,GO:0044272,GO:0044281,GO:0044283,GO:0044424,GO:0044464,GO:0046483,GO:0071704,GO:0072527,GO:0072528,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576 2.5.1.3 0.00000000000000000000000000000000000006248 151.0
DYD1_k127_5546796_5 HAD-superfamily hydrolase, subfamily IIB - - - 0.0000000000000000000000000000000000008841 151.0
DYD1_k127_5546796_6 Peptidase family M28 K01439 - 3.5.1.18 0.00000000000000000005438 91.0
DYD1_k127_5555255_0 Sortilin, neurotensin receptor 3, - - - 0.0 1431.0
DYD1_k127_5555255_1 acid to the nucleotide precursor UDP-N-acetylmuramoyl-L-alanyl-D-glutamate (UMAG) in the biosynthesis of bacterial cell-wall peptidoglycan K01928 - 6.3.2.13 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003978 423.0
DYD1_k127_5555255_2 amino acid K03294 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001482 338.0
DYD1_k127_5555255_3 Specifically catalyzes the decarboxylation of meso- diaminopimelate (meso-DAP) to L-lysine K01586 - 4.1.1.20 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000007916 310.0
DYD1_k127_5555255_4 Glycerol-3-phosphate dehydrogenase K00057 - 1.1.1.94 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000002023 299.0
DYD1_k127_5556198_0 Enoyl-CoA hydratase/isomerase K15513 - 4.1.2.44 3.347e-220 695.0
DYD1_k127_5556198_1 benzoyl-CoA oxygenase K15512 - 1.14.13.208 8.701e-211 663.0
DYD1_k127_5556198_2 Belongs to the enoyl-CoA hydratase isomerase family K01715 - 4.2.1.17 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004239 359.0
DYD1_k127_5556198_3 PFAM short-chain dehydrogenase reductase SDR - - - 0.0000000000000000000000000000000000000000000000000000000000000000000001304 246.0
DYD1_k127_5556198_4 Enoyl-CoA hydratase/isomerase K15866 - 5.3.3.18 0.00000000000000000000000000000000000000000000000000000000000000195 228.0
DYD1_k127_5556198_5 Maf-like protein K06287 - - 0.000000000000000000000000000000000000876 142.0
DYD1_k127_5556198_6 Bacterial regulatory proteins, tetR family K09017 - - 0.000000000000000000000000000000001366 138.0
DYD1_k127_5556198_7 TIGRFAM DNA protecting protein DprA K04096 - - 0.00000000000000007578 87.0
DYD1_k127_5559805_0 efflux transmembrane transporter activity K02004 - - 1.269e-204 665.0
DYD1_k127_5559805_1 efflux transmembrane transporter activity - - - 1.493e-196 639.0
DYD1_k127_5559805_2 response regulator - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008512 439.0
DYD1_k127_5559805_3 MacB-like periplasmic core domain - - - 0.00000000000000000000000000000000001097 139.0
DYD1_k127_5562190_0 major pilin protein fima - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000766 424.0
DYD1_k127_5562190_1 Protein of unknown function (DUF512) - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000478 287.0
DYD1_k127_5562190_2 PFAM TM2 domain - - - 0.00000000000000000000000000003213 120.0
DYD1_k127_5562190_3 Protein of unknown function (DUF2752) - - - 0.0000000000000000000000006202 110.0
DYD1_k127_5562190_4 O-Antigen ligase K18814 - - 0.0000000000000000000003019 108.0
DYD1_k127_5562190_5 Interferon-induced transmembrane protein - - - 0.00000000000000000114 89.0
DYD1_k127_5562190_6 - - - - 0.000001456 57.0
DYD1_k127_5565621_0 NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient K00331 - 1.6.5.3 0.000000000000000000000000000000000000000000000000000000000000000001242 232.0
DYD1_k127_5565621_1 DNA-templated transcription, initiation - - - 0.000000000000000000000000000000000000000000000000000181 200.0
DYD1_k127_5565621_2 Belongs to the sigma-70 factor family. ECF subfamily K03088 - - 0.00000000000000000000000000000000000000000000006948 175.0
DYD1_k127_5565621_3 NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient K00330 - 1.6.5.3 0.0000000000000000000000000000002634 127.0
DYD1_k127_5565621_4 Periplasmic or secreted lipoprotein - - - 0.000000000002284 76.0
DYD1_k127_5567158_0 Substrate binding domain of ABC-type glycine betaine transport system K05845,K05846 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002634 491.0
DYD1_k127_5567158_1 SMART ATPase, AAA type, core K05847 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001663 316.0
DYD1_k127_5567158_2 Histidine-specific methyltransferase, SAM-dependent - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000003286 296.0
DYD1_k127_5567158_3 Bidirectionally degrades single-stranded DNA into large acid-insoluble oligonucleotides, which are then degraded further into small acid-soluble oligonucleotides K03601,K03797 - 3.1.11.6,3.4.21.102 0.00000000000000000000000000000000000006955 146.0
DYD1_k127_5567158_4 - - - - 0.00000000000000000000000000004154 118.0
DYD1_k127_5567158_5 von Willebrand factor, type A - - - 0.000000000000000000003909 108.0
DYD1_k127_5567310_0 Catalyzes the condensation of the acetyl group of acetyl-CoA with 3-methyl-2-oxobutanoate (2-oxoisovalerate) to form 3-carboxy-3-hydroxy-4-methylpentanoate (2-isopropylmalate) K01649 - 2.3.3.13 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008986 476.0
DYD1_k127_5567310_1 Peptidase family M28 - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002301 361.0
DYD1_k127_5567310_2 Thymidine kinase K00857 GO:0003674,GO:0003824,GO:0004797,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006139,GO:0006213,GO:0006259,GO:0006725,GO:0006753,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009116,GO:0009117,GO:0009120,GO:0009123,GO:0009124,GO:0009157,GO:0009162,GO:0009165,GO:0009987,GO:0016301,GO:0016310,GO:0016740,GO:0016772,GO:0018130,GO:0019136,GO:0019205,GO:0019206,GO:0019438,GO:0019637,GO:0034641,GO:0034654,GO:0043170,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044271,GO:0044281,GO:0044424,GO:0044444,GO:0044464,GO:0046104,GO:0046125,GO:0046483,GO:0055086,GO:0071704,GO:0072527,GO:0090304,GO:0090407,GO:1901135,GO:1901293,GO:1901360,GO:1901362,GO:1901564,GO:1901576,GO:1901657 2.7.1.21 0.0000000000000000000000000000000000000000000000000000000000000000601 228.0
DYD1_k127_5567310_3 Catalyzes the interconversion of 2-phosphoglycerate and 3-phosphoglycerate K15633 - 5.4.2.12 0.00000000000000000000000000000000000000000000000000000004275 199.0
DYD1_k127_5567310_4 Glycosyltransferase family 9 (heptosyltransferase) - - - 0.000000000000000000000000000000001368 142.0
DYD1_k127_5567310_5 Caspase domain - - - 0.00000000000000000000000000000007076 137.0
DYD1_k127_5567310_6 Protein of unknown function DUF84 - - - 0.0000000000002142 80.0
DYD1_k127_5567310_7 HD domain - - - 0.000001484 59.0
DYD1_k127_5567310_8 self proteolysis - - - 0.00001347 57.0
DYD1_k127_5569769_0 PFAM ATPase family associated with various cellular activities (AAA) - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002739 433.0
DYD1_k127_5569769_1 amino acid activation for nonribosomal peptide biosynthetic process - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000001039 265.0
DYD1_k127_5569769_2 Domain of unknown function (DUF4159) - - - 0.0000000000000000000000000000000000000000000000002531 188.0
DYD1_k127_5569769_3 oxidoreductase activity K12511 - - 0.0000000000000000000000000000000000000001025 163.0
DYD1_k127_5573201_0 Heat shock 70 kDa protein K04043 - - 1.911e-227 715.0
DYD1_k127_5573201_1 3-Deoxy-D-manno-octulosonic-acid transferase (kdotransferase) K02527 - 2.4.99.12,2.4.99.13,2.4.99.14,2.4.99.15 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000003967 306.0
DYD1_k127_5573201_2 Involved in peptide bond synthesis. Stimulates efficient translation and peptide-bond synthesis on native or reconstituted 70S ribosomes in vitro. Probably functions indirectly by altering the affinity of the ribosome for aminoacyl-tRNA, thus increasing their reactivity as acceptors for peptidyl transferase K02356 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000008932 265.0
DYD1_k127_5573201_3 Negative regulator of class I heat shock genes (grpE- dnaK-dnaJ and groELS operons). Prevents heat-shock induction of these operons K03705 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000009408 263.0
DYD1_k127_5573201_4 Transfers the gamma-phosphate of ATP to the 4'-position of a tetraacyldisaccharide 1-phosphate intermediate (termed DS-1- P) to form tetraacyldisaccharide 1,4'-bis-phosphate (lipid IVA) K00912 - 2.7.1.130 0.0000000000000000000000000000000000000000000000000000000000003695 225.0
DYD1_k127_5573201_5 nucleotide metabolic process - - - 0.00000000000000000000000000000000000000000000000000005858 196.0
DYD1_k127_5573201_6 Participates actively in the response to hyperosmotic and heat shock by preventing the aggregation of stress-denatured proteins, in association with DnaK and GrpE. It is the nucleotide exchange factor for DnaK and may function as a thermosensor. Unfolded proteins bind initially to DnaJ K03687 GO:0000166,GO:0000774,GO:0001871,GO:0003674,GO:0005488,GO:0005515,GO:0005575,GO:0005623,GO:0008150,GO:0009986,GO:0017076,GO:0030234,GO:0030246,GO:0030247,GO:0030554,GO:0036094,GO:0044464,GO:0050790,GO:0051082,GO:0060589,GO:0060590,GO:0065007,GO:0065009,GO:0097159,GO:0098772,GO:1901265,GO:1901363,GO:2001065 - 0.00000000000000000000000000000004725 133.0
DYD1_k127_5579677_0 Tricorn protease C1 domain K08676 - - 0.0 1284.0
DYD1_k127_5579677_1 Pkd domain containing protein - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003733 537.0
DYD1_k127_5579677_2 - - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001029 521.0
DYD1_k127_5579677_3 PFAM TonB-dependent Receptor Plug - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008374 388.0
DYD1_k127_5579677_4 Amidohydrolase family - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005448 307.0
DYD1_k127_5579677_5 toxin-antitoxin pair type II binding - - - 0.000000000000000000000000000000000004144 138.0
DYD1_k127_5579677_6 - - - - 0.00000000000000000000000000001247 124.0
DYD1_k127_5579677_7 von Willebrand factor, type A K07114 - - 0.0000000000000000003621 100.0
DYD1_k127_5579677_8 protein conserved in cyanobacteria - - - 0.00000000000000006043 89.0
DYD1_k127_5584038_0 PrkA AAA domain protein K07180 - - 1.346e-305 948.0
DYD1_k127_5584038_1 SpoVR like protein K06415 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006343 575.0
DYD1_k127_5584038_2 Catalyzes the attachment of alanine to tRNA(Ala) in a two-step reaction alanine is first activated by ATP to form Ala- AMP and then transferred to the acceptor end of tRNA(Ala). Also edits incorrectly charged Ser-tRNA(Ala) and Gly-tRNA(Ala) via its editing domain K01872 GO:0003674,GO:0003824,GO:0004812,GO:0004813,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006082,GO:0006139,GO:0006396,GO:0006399,GO:0006400,GO:0006412,GO:0006418,GO:0006419,GO:0006518,GO:0006520,GO:0006725,GO:0006807,GO:0008033,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009451,GO:0009987,GO:0010467,GO:0016070,GO:0016597,GO:0016874,GO:0016875,GO:0019538,GO:0019752,GO:0031406,GO:0034470,GO:0034641,GO:0034645,GO:0034660,GO:0036094,GO:0043038,GO:0043039,GO:0043043,GO:0043167,GO:0043168,GO:0043170,GO:0043177,GO:0043412,GO:0043436,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044281,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0071704,GO:0090304,GO:0140098,GO:0140101,GO:1901360,GO:1901564,GO:1901566,GO:1901576 6.1.1.7 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008662 513.0
DYD1_k127_5584038_3 Belongs to the UPF0229 family K09786 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004211 492.0
DYD1_k127_5584038_4 Responsible for synthesis of pseudouridine from uracil- 55 in the psi GC loop of transfer RNAs K03177 GO:0001522,GO:0003674,GO:0003824,GO:0006139,GO:0006396,GO:0006399,GO:0006400,GO:0006725,GO:0006807,GO:0008033,GO:0008150,GO:0008152,GO:0009451,GO:0009982,GO:0009987,GO:0010467,GO:0016070,GO:0016071,GO:0016556,GO:0016853,GO:0016866,GO:0034470,GO:0034641,GO:0034660,GO:0043170,GO:0043412,GO:0044237,GO:0044238,GO:0046483,GO:0071704,GO:0090304,GO:1901360,GO:1990481 5.4.99.25 0.00000000000000000000000000000000000000000000000000000000003158 216.0
DYD1_k127_5584038_5 PFAM alpha beta hydrolase fold - - - 0.0000000000000000000000000000000000000001569 163.0
DYD1_k127_5584038_6 Modulates RecA activity K03565 - - 0.00000004064 62.0
DYD1_k127_5584257_0 Involved in the biosynthesis of the chorismate, which leads to the biosynthesis of aromatic amino acids. Catalyzes the reversible NADPH linked reduction of 3-dehydroshikimate (DHSA) to yield shikimate (SA) K13832 - 1.1.1.25,4.2.1.10 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000006158 290.0
DYD1_k127_5584257_1 Belongs to the class IV-like SAM-binding methyltransferase superfamily. RNA methyltransferase TrmH family K03218 GO:0000154,GO:0000451,GO:0000453,GO:0001510,GO:0003674,GO:0003824,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006139,GO:0006364,GO:0006396,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0008168,GO:0008171,GO:0008173,GO:0008649,GO:0008757,GO:0009451,GO:0009987,GO:0010467,GO:0016070,GO:0016072,GO:0016435,GO:0016740,GO:0016741,GO:0022613,GO:0031167,GO:0032259,GO:0034470,GO:0034641,GO:0034660,GO:0042254,GO:0043170,GO:0043412,GO:0043414,GO:0044085,GO:0044237,GO:0044238,GO:0044260,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0070039,GO:0071704,GO:0071840,GO:0090304,GO:0140098,GO:0140102,GO:1901360 2.1.1.185 0.0000000000000000000000000000000000000000000000000000000000000000339 232.0
DYD1_k127_5584257_2 NYN domain - - - 0.0000000000000000000000000000000000000000000000000000000007348 210.0
DYD1_k127_5584257_3 Uncharacterized conserved protein (DUF2203) - - - 0.0000000000000000000001682 101.0
DYD1_k127_5584257_4 RDD family - - - 0.00002618 56.0
DYD1_k127_5595268_0 Belongs to the UbiD family K03182,K16239 - 4.1.1.61,4.1.1.98 1.328e-240 756.0
DYD1_k127_5595268_1 Insulinase (Peptidase family M16) K07263 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002191 500.0
DYD1_k127_5595268_2 PFAM Peptidase M16 inactive domain K07263 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005635 481.0
DYD1_k127_5595268_3 Diguanylate cyclase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009323 458.0
DYD1_k127_5595268_4 Trypsin-like serine protease - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000001561 279.0
DYD1_k127_5595268_5 Cleaves type-4 fimbrial leader sequence and methylates the N-terminal (generally Phe) residue K02654 - 3.4.23.43 0.00000000000000000000000000000000000000000002951 169.0
DYD1_k127_5595268_6 Histidine kinase K02668,K07709,K07710 - 2.7.13.3 0.00000000000000000000000000000000000001621 162.0
DYD1_k127_5595268_7 histone H2A K63-linked ubiquitination K08884,K11894 - 2.7.11.1 0.00000000000001345 87.0
DYD1_k127_5595268_8 - - - - 0.000002066 54.0
DYD1_k127_5599762_0 Histidine kinase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009489 619.0
DYD1_k127_5599762_1 response regulator, receiver - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004388 421.0
DYD1_k127_5599762_2 Belongs to the class-II pyridine nucleotide-disulfide oxidoreductase family K00384 - 1.8.1.9 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002649 379.0
DYD1_k127_5599762_3 Enoyl-CoA hydratase K01715 - 4.2.1.17 0.00000000000000000000000000000000000000000000000000000000000000000000000000000009454 274.0
DYD1_k127_5599762_4 dehydrogenase K00074 - 1.1.1.157 0.000000000000000000000000000000000000000000000000000000000000000000000000000000596 273.0
DYD1_k127_5599762_5 Protein of unknown function (DUF563) - - - 0.000000000000000000000000000000000000000000000000000002898 204.0
DYD1_k127_5599762_6 Methyltransferase FkbM domain - - - 0.000000000000000000000000000000000000000000000000005849 192.0
DYD1_k127_5599762_7 HxlR-like helix-turn-helix - - - 0.00000000000000000009145 96.0
DYD1_k127_5599762_8 COG2303 Choline dehydrogenase and related flavoproteins K03333 - 1.1.3.6 0.0000000004449 60.0
DYD1_k127_5599762_9 Carboxypeptidase regulatory-like domain - - - 0.00001789 57.0
DYD1_k127_5605177_0 ADP-glyceromanno-heptose 6-epimerase activity K13318,K13322,K16439,K19857 - - 0.000000000000000000000000000000000000000000000000000000000000000000008413 246.0
DYD1_k127_5605177_1 NAD dependent epimerase dehydratase family K17947 - 5.1.3.25 0.00000000000000000000001827 102.0
DYD1_k127_5605177_2 Pfam Glycosyl transferases group 1 - - - 0.000000000000000001002 98.0
DYD1_k127_5605177_3 PFAM NAD-dependent epimerase dehydratase K01784,K08678 - 4.1.1.35,5.1.3.2 0.00000000000000002448 89.0
DYD1_k127_5659293_0 nuclear chromosome segregation - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005123 506.0
DYD1_k127_5659293_1 ATPase family associated with various cellular activities (AAA) K03924 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000464 414.0
DYD1_k127_5659293_2 Tetratricopeptide repeats - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001602 393.0
DYD1_k127_5659293_3 Protein of unknown function DUF58 - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000507 280.0
DYD1_k127_5659293_4 Aerotolerance regulator N-terminal - - - 0.00000000000000000000000000000000000000000000000000000000000008457 237.0
DYD1_k127_5665271_0 catalyzes the demethylation of specific methylglutamate residues introduced into the chemoreceptors (methyl-accepting chemotaxis proteins) by CheR - - - 0.0 1168.0
DYD1_k127_5665271_1 Predicted membrane protein (DUF2254) - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001991 344.0
DYD1_k127_5665271_2 response regulator, receiver - - - 0.00000000000000000000000000000000000000000000000000000000003277 230.0
DYD1_k127_5665271_3 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase - - - 0.0000000000000000000000000000000000000000000000000000003119 218.0
DYD1_k127_5665271_4 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase - - - 0.000000000000000000000000000000000000005743 167.0
DYD1_k127_5670790_0 FAD dependent oxidoreductase K00111 - 1.1.5.3 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004117 534.0
DYD1_k127_5670790_1 MacB-like periplasmic core domain K02004 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006191 367.0
DYD1_k127_5670790_2 recombinase XerD K04763 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000312 271.0
DYD1_k127_5670790_3 Domain of unknown function (DUF1990) - - - 0.0000000000000000000000000000000000000000000000000000000000002489 216.0
DYD1_k127_5670790_4 FecR protein - - - 0.000000000000000000000000000000000000000000000000000000002173 222.0
DYD1_k127_5670790_5 MacB-like periplasmic core domain K02004 - - 0.00000000000002414 75.0
DYD1_k127_5672000_0 UDP binding domain K00012 - 1.1.1.22 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002533 571.0
DYD1_k127_5672000_1 Catalyzes the interconversion of methylthioribose-1- phosphate (MTR-1-P) into methylthioribulose-1-phosphate (MTRu-1- P) K08963 - 5.3.1.23 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002284 424.0
DYD1_k127_5672000_2 NAD(P)H-binding K01784,K02473 - 5.1.3.2,5.1.3.7 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001951 345.0
DYD1_k127_5672000_3 PFAM periplasmic binding protein K02016 - - 0.00000000000000000000000000000000000000034 159.0
DYD1_k127_5673011_0 4-Hydroxyphenylpyruvate dioxygenase K00457,K16421 GO:0003674,GO:0003824,GO:0003868,GO:0006082,GO:0006520,GO:0006570,GO:0006572,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0009056,GO:0009063,GO:0009072,GO:0009074,GO:0009987,GO:0016054,GO:0016491,GO:0016701,GO:0016702,GO:0019439,GO:0019752,GO:0043436,GO:0044237,GO:0044238,GO:0044248,GO:0044281,GO:0044282,GO:0046395,GO:0051213,GO:0055114,GO:0071704,GO:1901360,GO:1901361,GO:1901564,GO:1901565,GO:1901575,GO:1901605,GO:1901606 1.13.11.27,1.13.11.46 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008624 468.0
DYD1_k127_5673011_1 Non-ribosomal peptide synthetase modules and related - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006141 462.0
DYD1_k127_5673011_2 PFAM aminotransferase class I and II K05825 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006036 436.0
DYD1_k127_5696841_0 Forkhead associated domain K12132 - 2.7.11.1 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002546 344.0
DYD1_k127_5696841_1 With LigD forms a non-homologous end joining (NHEJ) DNA repair enzyme, which repairs dsDNA breaks with reduced fidelity. Binds linear dsDNA with 5'- and 3'- overhangs but not closed circular dsDNA nor ssDNA. Recruits and stimulates the ligase activity of LigD K10979 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000008601 282.0
DYD1_k127_5696841_2 peptidyl-tyrosine sulfation - - - 0.0000000000000000000000000000000005291 141.0
DYD1_k127_5696841_3 SPFH domain-Band 7 family - - - 0.0000000001082 72.0
DYD1_k127_5696841_4 PhoD-like phosphatase - - - 0.000006434 48.0
DYD1_k127_5698380_0 Radical SAM - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000322 611.0
DYD1_k127_5698380_1 PFAM type II secretion system protein E K02283,K03609 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002965 558.0
DYD1_k127_5698380_2 ATPases associated with a variety of cellular activities - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001593 352.0
DYD1_k127_5698380_3 Type II secretion system K12510 - - 0.0000000000000000000000000000000000000000000000000000000002828 225.0
DYD1_k127_5698380_4 Secretion system protein K12511 - - 0.000000000000000000000000000000000000000000000000001149 205.0
DYD1_k127_5698380_5 PFAM Transglycosylase SLT domain K08309 - - 0.0000000000000000000000000000000000544 146.0
DYD1_k127_5698380_6 repeat protein - - - 0.00000000000000001446 95.0
DYD1_k127_5715888_0 metallocarboxypeptidase activity K14054 - - 2.43e-282 899.0
DYD1_k127_5715888_1 DEAD DEAH box helicase K03724 - - 1.922e-280 879.0
DYD1_k127_5715888_2 DinB superfamily - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001221 404.0
DYD1_k127_5715888_3 transferase activity, transferring glycosyl groups - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000009291 287.0
DYD1_k127_5715888_4 Belongs to the UPF0502 family K09915 - - 0.0000000000000000000000000000000000000000000000000000000000004342 218.0
DYD1_k127_5717161_0 serine-type peptidase activity - - - 8.512e-261 827.0
DYD1_k127_5717161_1 Nodulation protein S (NodS) K16130 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007787 601.0
DYD1_k127_5717161_2 Phytanoyl-CoA dioxygenase (PhyH) K15650 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001242 477.0
DYD1_k127_5717161_3 PFAM cytochrome P450 K15468 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000288 344.0
DYD1_k127_5717161_4 - - - - 0.000000000000000000000000000002321 134.0
DYD1_k127_5721032_0 methyltransferase activity K21310 - 2.1.1.334 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002183 333.0
DYD1_k127_5721032_1 helix_turn_helix, Lux Regulon - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000009103 259.0
DYD1_k127_5725041_0 acetyl-CoA carboxylase, biotin carboxylase K01961 - 6.3.4.14,6.4.1.2 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004363 417.0
DYD1_k127_5725041_1 Catalyzes the phosphorylation of D-fructose 6-phosphate, the first committing step of glycolysis. Uses inorganic phosphate (PPi) as phosphoryl donor instead of ATP like common ATP-dependent phosphofructokinases (ATP-PFKs), which renders the reaction reversible, and can thus function both in glycolysis and gluconeogenesis. Consistently, PPi-PFK can replace the enzymes of both the forward (ATP-PFK) and reverse (fructose-bisphosphatase (FBPase)) reactions K00850,K21071 - 2.7.1.11,2.7.1.90 0.00000000000000000000000000000000000000000000000000000001526 203.0
DYD1_k127_5725041_2 Belongs to the CDP-alcohol phosphatidyltransferase class-I family K00995 - 2.7.8.5 0.0000000000000000000000000000000000000000000000001333 185.0
DYD1_k127_5725041_3 Necessary for efficient RNA polymerase transcription elongation past template-encoded arresting sites. The arresting sites in DNA have the property of trapping a certain fraction of elongating RNA polymerases that pass through, resulting in locked ternary complexes. Cleavage of the nascent transcript by cleavage factors such as GreA or GreB allows the resumption of elongation from the new 3'terminus. GreA releases sequences of 2 to 3 nucleotides K03624 - - 0.00000000000000000000000000000000000000000005643 166.0
DYD1_k127_5725041_4 - - - - 0.000003592 52.0
DYD1_k127_5731913_0 Catalyzes the ATP-dependent amination of UTP to CTP with either L-glutamine or ammonia as the source of nitrogen. Regulates intracellular CTP levels through interactions with the four ribonucleotide triphosphates K01937 - 6.3.4.2 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005656 408.0
DYD1_k127_5731913_1 serine threonine protein kinase K08884,K12132 - 2.7.11.1 0.00000000000000000000000000000000000000000006386 166.0
DYD1_k127_5786792_0 ASPIC and UnbV - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007975 579.0
DYD1_k127_5809640_0 A type II topoisomerase that negatively supercoils closed circular double-stranded (ds) DNA in an ATP-dependent manner to modulate DNA topology and maintain chromosomes in an underwound state. Negative supercoiling favors strand separation, and DNA replication, transcription, recombination and repair, all of which involve strand separation. Also able to catalyze the interconversion of other topological isomers of dsDNA rings, including catenanes and knotted rings. Type II topoisomerases break and join 2 DNA strands simultaneously in an ATP-dependent manner K02469 - 5.99.1.3 8.896e-278 877.0
DYD1_k127_5809640_1 Urocanase Rossmann-like domain K01712 - 4.2.1.49 3.922e-268 833.0
DYD1_k127_5809640_2 Peptidase dimerisation domain K01438 - 3.5.1.16 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006319 374.0
DYD1_k127_5809640_3 Inositol monophosphatase family K01092 - 3.1.3.25 0.0000000000000000000000000000000000000000000000000000000000000000000000000001062 264.0
DYD1_k127_5809640_4 Molybdopterin converting factor subunit K03635,K21142 - 2.8.1.12 0.000000000000000000000000000000000000000000000000000000001356 208.0
DYD1_k127_5809640_5 ATP-dependent protease La (LON) substrate-binding domain K01338 - 3.4.21.53 0.0000000000000000000000000000000000000000001202 168.0
DYD1_k127_5809640_6 PFAM Phospholipid glycerol acyltransferase K00655 - 2.3.1.51 0.00000000000000000000000001158 119.0
DYD1_k127_5809640_7 Amidohydrolase family K05603 - 3.5.3.13 0.00000000000000000002775 93.0
DYD1_k127_5809640_8 - - - - 0.00000000000000000002825 103.0
DYD1_k127_5809640_9 cheY-homologous receiver domain - - - 0.000000000002079 72.0
DYD1_k127_5839355_0 This protein is involved in the repair of mismatches in DNA. It is required for dam-dependent methyl-directed DNA mismatch repair. May act as a molecular matchmaker , a protein that promotes the formation of a stable complex between two or more DNA-binding proteins in an ATP-dependent manner without itself being part of a final effector complex K03572 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006689 498.0
DYD1_k127_5839355_1 carboxylase, biotin carboxylase K01961,K01965,K01968,K11263 - 6.3.4.14,6.4.1.2,6.4.1.3,6.4.1.4 0.000000000000000000000000000000000000000000000000000000000000006461 222.0
DYD1_k127_5839355_2 Biotin-requiring enzyme - - - 0.000000000000000000005066 102.0
DYD1_k127_585570_0 Pfam:NRPS K12240 - - 3.266e-225 722.0
DYD1_k127_5863179_0 Histidine kinase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008882 333.0
DYD1_k127_5863179_1 Response regulator receiver K02477 - - 0.0000000000000000000000000000000000000000000000000000000006676 212.0
DYD1_k127_5863179_2 YndJ-like protein - - - 0.0000000000000000000000000000000000000001098 163.0
DYD1_k127_5865757_0 NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient K00343 - 1.6.5.3 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000599 429.0
DYD1_k127_5865757_1 Proton-conducting membrane transporter K00342 - 1.6.5.3 0.0000000000000000000000000000000000000000000000000000000000000000008184 234.0
DYD1_k127_5865757_2 Glycosyl transferase family 21 - - - 0.0000000000000000000000000000000000000000000000000000008105 214.0
DYD1_k127_5865757_3 Radical SAM superfamily - - - 0.0000000000000000000000000000000000005867 146.0
DYD1_k127_5865757_4 Radical SAM superfamily - - - 0.0000000000000000000000001276 112.0
DYD1_k127_5872675_0 Carboxypeptidase regulatory-like domain - - - 1.306e-262 839.0
DYD1_k127_5872675_1 Belongs to the class-I aminoacyl-tRNA synthetase family K01869 - 6.1.1.4 1.612e-214 686.0
DYD1_k127_5872675_10 helix_turn_helix, arabinose operon control protein K07720 - - 0.00000000000002893 80.0
DYD1_k127_5872675_11 Tetratricopeptide repeat - - - 0.000000000002688 79.0
DYD1_k127_5872675_12 cation transport ATPase K01533,K12954,K17686 - 3.6.3.4,3.6.3.54 0.00085 45.0
DYD1_k127_5872675_2 Bilirubin oxidase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001457 355.0
DYD1_k127_5872675_3 amine dehydrogenase activity - - - 0.00000000000000000000000000000000000000000000000000000000000002195 227.0
DYD1_k127_5872675_4 SCO1/SenC - - - 0.0000000000000000000000000000000000000000000000000000000005797 214.0
DYD1_k127_5872675_5 protein kinase activity - - - 0.00000000000000000000000000000000000000000000000000000000147 224.0
DYD1_k127_5872675_6 SCO1/SenC K07152 - - 0.00000000000000000000000000000000000002516 151.0
DYD1_k127_5872675_7 Multicopper oxidase K00368,K22349 - 1.16.3.3,1.7.2.1 0.000000000000000000000001322 105.0
DYD1_k127_5872675_8 cell redox homeostasis K02199 - - 0.0000000000000000000001034 106.0
DYD1_k127_5872675_9 Protein of unknown function with PCYCGC motif - - - 0.000000000000000003097 91.0
DYD1_k127_587556_0 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily - - - 0.000000000000000000000000000000000000000000000000000003083 193.0
DYD1_k127_587556_1 Sigma factor PP2C-like phosphatases K20074 - 3.1.3.16 0.000000000000000000000000000000000000000000008454 179.0
DYD1_k127_587556_2 Cell division protein FtsI penicillin-binding protein K05364 - - 0.000000000000000000000000000000000000009804 165.0
DYD1_k127_587556_3 Belongs to the SEDS family K03588 GO:0002682,GO:0002684,GO:0008150,GO:0009605,GO:0009607,GO:0009987,GO:0035821,GO:0043207,GO:0044003,GO:0044403,GO:0044419,GO:0048518,GO:0048583,GO:0048584,GO:0050776,GO:0050778,GO:0050789,GO:0050896,GO:0051301,GO:0051701,GO:0051704,GO:0051707,GO:0051817,GO:0052031,GO:0052173,GO:0052200,GO:0052255,GO:0052552,GO:0052553,GO:0052555,GO:0052556,GO:0052564,GO:0052572,GO:0065007,GO:0075136 - 0.00000000000000000000000000000000005394 154.0
DYD1_k127_587556_4 ABC transporter K01990,K21397 - - 0.00000000006651 72.0
DYD1_k127_5890244_0 Phosphoenolpyruvate carboxykinase K01610 - 4.1.1.49 4.012e-205 651.0
DYD1_k127_5890244_1 Cell wall formation. Adds enolpyruvyl to UDP-N- acetylglucosamine K00790 - 2.5.1.7 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001602 487.0
DYD1_k127_5890244_2 PFAM cytochrome c oxidase, subunit III K02276 - 1.9.3.1 0.00000000000000000000000000000000000000000000000000000000000000000000000005365 256.0
DYD1_k127_5890244_3 spore germination - - - 0.000000000000000000000000000000000000000000000000000000000008098 218.0
DYD1_k127_5890244_4 - - - - 0.0000000000000000000000000000000000000000000000000000000004861 212.0
DYD1_k127_5890244_5 - - - - 0.000000000000000000000000000000000000000000002128 173.0
DYD1_k127_5890244_6 HIT domain K02503 - - 0.0000000000000000000000000000000000004646 142.0
DYD1_k127_5890244_7 Ferredoxin K00529,K04755,K08952,K08953,K08954,K15765 GO:0005575,GO:0005622,GO:0005623,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0044424,GO:0044464,GO:0046858 1.18.1.3 0.00000000000000000000000000001293 131.0
DYD1_k127_5890244_8 Prokaryotic Cytochrome C oxidase subunit IV K02277 - 1.9.3.1 0.00000000000000000236 89.0
DYD1_k127_5890244_9 - - - - 0.000008183 49.0
DYD1_k127_5907081_0 Molydopterin dinucleotide binding domain K00123 - 1.17.1.9 0.0 1346.0
DYD1_k127_5907081_1 Formate dehydrogenase N, transmembrane K00124 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002583 412.0
DYD1_k127_5907081_2 formate dehydrogenase K00127,K08350 GO:0003674,GO:0003824,GO:0005488,GO:0005575,GO:0005623,GO:0005886,GO:0005887,GO:0006082,GO:0006091,GO:0006950,GO:0006974,GO:0008150,GO:0008152,GO:0009055,GO:0009061,GO:0009326,GO:0009987,GO:0015942,GO:0015944,GO:0015980,GO:0016020,GO:0016021,GO:0016491,GO:0016903,GO:0016999,GO:0017144,GO:0019752,GO:0020037,GO:0022900,GO:0031224,GO:0031226,GO:0032787,GO:0032991,GO:0033554,GO:0036397,GO:0043436,GO:0044237,GO:0044281,GO:0044425,GO:0044459,GO:0044464,GO:0045333,GO:0046906,GO:0048037,GO:0050896,GO:0051716,GO:0052738,GO:0055114,GO:0071704,GO:0071944,GO:0097159,GO:1901363,GO:1902494 - 0.0000000000000000000000000000000000000000000000005266 183.0
DYD1_k127_5907081_3 phosphatase activity - - - 0.0000000000000000006171 88.0
DYD1_k127_5907081_4 PFAM CHAD domain - - - 0.00000000000000001896 92.0
DYD1_k127_5907081_5 phosphatase activity - - - 0.000000005228 63.0
DYD1_k127_5910488_0 TIGRFAM amino acid adenylation domain K16132 - - 2.757e-311 981.0
DYD1_k127_5920607_0 Methyltransferase domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000001978 284.0
DYD1_k127_5920607_1 Belongs to the prokaryotic molybdopterin-containing oxidoreductase family - - - 0.0000000000000000000000000000000000000000000773 166.0
DYD1_k127_5920607_2 Lysin motif - - - 0.00000000000000000000000000000000000000001271 158.0
DYD1_k127_5926791_0 methyltransferase activity K00569,K16437,K21336 - 2.1.1.67 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000164 538.0
DYD1_k127_5926791_1 Belongs to the DegT DnrJ EryC1 family K16436 - 2.6.1.106 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002542 414.0
DYD1_k127_5926791_2 pfam abc K09691 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003528 386.0
DYD1_k127_5927746_0 PFAM Prolyl oligopeptidase, N-terminal beta-propeller domain K01322 - 3.4.21.26 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001579 409.0
DYD1_k127_5927746_1 ABC transporter, transmembrane K18890 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000005249 275.0
DYD1_k127_5927746_2 lytic transglycosylase activity K03194 - - 0.00000003106 66.0
DYD1_k127_5942699_0 ATPases associated with a variety of cellular activities K10823,K10824 - 3.6.3.24 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001365 426.0
DYD1_k127_5942699_1 TIGRFAM oligopeptide dipeptide ABC transporter, ATPase subunit K02031,K15583 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004071 409.0
DYD1_k127_5942699_2 'ABC-type dipeptide oligopeptide nickel transport K02034,K15582 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001354 363.0
DYD1_k127_5942699_3 PFAM Binding-protein-dependent transport system inner membrane component K02033,K15581,K15585 - - 0.000000000000000000000000000000000000000000000000000000000000000000000004826 247.0
DYD1_k127_5942699_4 PFAM GGDEF domain containing protein - - - 0.00000000000000000000000000000000000000000000000000000000000000000002759 253.0
DYD1_k127_5942699_5 - - - - 0.00002874 57.0
DYD1_k127_5948251_0 Catalyzes the sequential NAD-dependent oxidations of L- histidinol to L-histidinaldehyde and then to L-histidine K00013 GO:0000105,GO:0003674,GO:0003824,GO:0004399,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006082,GO:0006520,GO:0006547,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0008652,GO:0009058,GO:0009987,GO:0016053,GO:0016491,GO:0016614,GO:0016616,GO:0018130,GO:0019438,GO:0019752,GO:0034641,GO:0043436,GO:0044237,GO:0044238,GO:0044249,GO:0044281,GO:0044283,GO:0044424,GO:0044444,GO:0044464,GO:0046394,GO:0046483,GO:0052803,GO:0055114,GO:0071704,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576,GO:1901605,GO:1901607 1.1.1.23 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007674 414.0
DYD1_k127_5948251_1 Catalyzes the condensation of ATP and 5-phosphoribose 1- diphosphate to form N'-(5'-phosphoribosyl)-ATP (PR-ATP). Has a crucial role in the pathway because the rate of histidine biosynthesis seems to be controlled primarily by regulation of HisG enzymatic activity K00765,K02502 - 2.4.2.17 0.0000000000000000000000000000000000000000000000000000001121 201.0
DYD1_k127_5948251_2 Histidyl-tRNA synthetase - - - 0.0000000000000000000000000000000000000000000571 170.0
DYD1_k127_5979955_0 Hydantoinase/oxoprolinase K01473 - 3.5.2.14 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000727 354.0
DYD1_k127_5979955_1 Hydantoinase B/oxoprolinase K01474 - 3.5.2.14 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004698 347.0
DYD1_k127_5979955_2 Hydantoinase B/oxoprolinase K01474 - 3.5.2.14 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000004317 283.0
DYD1_k127_5979955_3 von Willebrand factor (vWF) type A domain K02448 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000001476 284.0
DYD1_k127_6001115_0 ATP-dependent serine protease that mediates the selective degradation of mutant and abnormal proteins as well as certain short-lived regulatory proteins. Required for cellular homeostasis and for survival from DNA damage and developmental changes induced by stress. Degrades polypeptides processively to yield small peptide fragments that are 5 to 10 amino acids long. Binds to DNA in a double-stranded, site-specific manner K01338 - 3.4.21.53 1.273e-301 945.0
DYD1_k127_6001115_1 Catalyzes the reversible transfer of the terminal phosphate of ATP to form a long-chain polyphosphate (polyP) K00937 - 2.7.4.1 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001533 355.0
DYD1_k127_6001115_10 Domain of unknown function (DUF4956) - - - 0.000000009535 66.0
DYD1_k127_6001115_2 Negatively regulates transcription of bacterial ribonucleotide reductase nrd genes and operons by binding to NrdR- boxes K07738 - - 0.000000000000000000000000000000000000000000000000000000000000001557 221.0
DYD1_k127_6001115_3 TIGRFAM RNA polymerase sigma factor, sigma-70 family K03088 - - 0.000000000000000000000000000000000000000000004522 170.0
DYD1_k127_6001115_4 Peptidase, M23 family - - - 0.0000000000000000000000000000000000000002202 160.0
DYD1_k127_6001115_5 Tyrosine phosphatase family - - - 0.0000000000000000000000002932 112.0
DYD1_k127_6001115_6 Cold-Shock Protein K03704 - - 0.000000000000000000000001268 106.0
DYD1_k127_6001115_7 Lysylphosphatidylglycerol synthase TM region K07027 - - 0.000000000000000000001257 107.0
DYD1_k127_6001115_8 Belongs to the small heat shock protein (HSP20) family K13993 - - 0.00000000000738 72.0
DYD1_k127_6001115_9 - - - - 0.0000000000378 73.0
DYD1_k127_6016417_0 Catalyzes the conversion of 1-proline-5-carboxylate dehydrogenase to L-glutamate K00294 - 1.2.1.88 7.415e-209 661.0
DYD1_k127_6016417_1 Catalyzes the anti-1,4-elimination of the C-3 phosphate and the C-6 proR hydrogen from 5-enolpyruvylshikimate-3-phosphate (EPSP) to yield chorismate, which is the branch point compound that serves as the starting substrate for the three terminal pathways of aromatic amino acid biosynthesis. This reaction introduces a second double bond into the aromatic ring system K01736 - 4.2.3.5 0.000000000000000000000000000000000000000000000000000000004698 202.0
DYD1_k127_6016417_2 Removes the formyl group from the N-terminal Met of newly synthesized proteins. Requires at least a dipeptide for an efficient rate of reaction. N-terminal L-methionine is a prerequisite for activity but the enzyme has broad specificity at other positions K01462 - 3.5.1.88 0.00000000000000000000000000000000000000000000000000000001508 201.0
DYD1_k127_6016417_3 Attaches a formyl group to the free amino group of methionyl-tRNA(fMet). The formyl group appears to play a dual role in the initiator identity of N-formylmethionyl-tRNA by promoting its recognition by IF2 and preventing the misappropriation of this tRNA by the elongation apparatus K00604 - 2.1.2.9 0.0000000000061 68.0
DYD1_k127_6032457_0 Electron transfer flavoprotein-ubiquinone oxidoreductase, 4Fe-4S K00311 - 1.5.5.1 1.828e-194 618.0
DYD1_k127_6032457_1 ABC transporter K11085 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004145 471.0
DYD1_k127_6032457_2 Stress-induced protein - - - 0.00000000000000000000000000000000000000000000000000000005688 207.0
DYD1_k127_6032457_3 response regulator receiver K02483,K07658 - - 0.0000000000000000000000000000000000000000000000000000002963 202.0
DYD1_k127_6032457_4 Essential for recycling GMP and indirectly, cGMP K00942 - 2.7.4.8 0.0000000000000000000000000000000000000000000000000000009928 199.0
DYD1_k127_6032457_5 Belongs to the ompA family - - - 0.0000000000000000000000000000000000000000004279 177.0
DYD1_k127_6032457_6 Histidine kinase - - - 0.00000000000000000194 97.0
DYD1_k127_6032457_7 DNA-directed 5'-3' RNA polymerase activity K03060 GO:0003674,GO:0003824,GO:0003899,GO:0005575,GO:0005618,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006139,GO:0006351,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0016070,GO:0016740,GO:0016772,GO:0016779,GO:0018130,GO:0019438,GO:0030312,GO:0030880,GO:0032774,GO:0032991,GO:0034062,GO:0034641,GO:0034645,GO:0034654,GO:0040007,GO:0043170,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044271,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0061695,GO:0071704,GO:0071944,GO:0090304,GO:0097659,GO:0097747,GO:0140098,GO:1901360,GO:1901362,GO:1901576,GO:1902494,GO:1990234 2.7.7.6 0.00003569 49.0
DYD1_k127_6034121_0 Dehydrogenase K00074 - 1.1.1.157 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005009 348.0
DYD1_k127_6034121_1 peptidyl-tyrosine sulfation - - - 0.00001328 57.0
DYD1_k127_6056224_0 Ribosomal protein S1 K02945 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006156 346.0
DYD1_k127_6056224_1 Two component regulator propeller - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007952 351.0
DYD1_k127_6056224_2 Ribosomal protein S1 K02945 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006823 317.0
DYD1_k127_6056224_3 Histone-like DNA-binding protein which is capable of wrapping DNA to stabilize it, and thus to prevent its denaturation under extreme environmental conditions K05788 - - 0.00006318 45.0
DYD1_k127_6059275_0 PFAM peptidase K01438 - 3.5.1.16 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000492 330.0
DYD1_k127_6059275_1 Belongs to the aspartokinase family K00928 - 2.7.2.4 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003258 326.0
DYD1_k127_6059275_2 Catalyzes the condensation of (S)-aspartate-beta- semialdehyde (S)-ASA and pyruvate to 4-hydroxy- tetrahydrodipicolinate (HTPA) K01714 - 4.3.3.7 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004249 318.0
DYD1_k127_6059275_3 Belongs to the transferase hexapeptide repeat family K00674 - 2.3.1.117 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000001957 293.0
DYD1_k127_6059275_4 Belongs to the DapB family K00215 - 1.17.1.8 0.0000000000000000000000000000000000000000000000002359 186.0
DYD1_k127_6067293_0 Peptidase, M16 - - - 0.000000000000000000000000000000000000000000000000000000000000002629 234.0
DYD1_k127_6067293_1 Photosynthesis system II assembly factor YCF48 - - - 0.00000000000000000000000000000000000006948 150.0
DYD1_k127_6073078_0 Multicopper oxidase K14588 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000001202 307.0
DYD1_k127_6073078_1 Las17-binding protein actin regulator - - - 0.0000000000000000000000000000000000000000000000009121 182.0
DYD1_k127_6073078_2 Multicopper oxidase - - - 0.0000000000000004465 81.0
DYD1_k127_6075649_0 cellulose binding - - - 0.0 1194.0
DYD1_k127_6075649_1 Glycosyl hydrolases family 16 K01216 - 3.2.1.73 0.0000000000000000000000000000000000002457 141.0
DYD1_k127_6087893_0 Tetratricopeptide repeat - - - 0.00000000000000000000000000000000000000000000000000002898 195.0
DYD1_k127_6087893_1 methyltransferase - - - 0.0000000000000006455 87.0
DYD1_k127_6087893_2 DNA-binding transcription factor activity - - - 0.000000002417 65.0
DYD1_k127_61126_0 Non-ribosomal peptide - - - 0.0 1685.0
DYD1_k127_61126_1 non-ribosomal peptide synthetase - - - 0.0 1653.0
DYD1_k127_61126_10 AAA-like domain - - - 0.000000000000000000004064 102.0
DYD1_k127_61126_11 PFAM Glycosyl transferase family 2 K07011 - - 0.000009829 58.0
DYD1_k127_61126_2 Thioesterase domain - - - 0.0 1262.0
DYD1_k127_61126_3 Amino acid adenylation domain K16130 - - 1.143e-247 790.0
DYD1_k127_61126_4 efflux transmembrane transporter activity - - - 1.466e-208 676.0
DYD1_k127_61126_5 ABC transporter transmembrane region K06160 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000012 575.0
DYD1_k127_61126_6 Belongs to the UDP-N-acetylglucosamine 2-epimerase family K01791 - 5.1.3.14 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000226 385.0
DYD1_k127_61126_7 ADP-glyceromanno-heptose 6-epimerase activity K01955,K16703 - 6.3.5.5 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001135 345.0
DYD1_k127_61126_8 AAA-like domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000002198 267.0
DYD1_k127_61126_9 K COG5665 CCR4-NOT transcriptional regulation complex, NOT5 subunit - - - 0.00000000000000000000001711 100.0
DYD1_k127_6142252_0 - K17285 - - 0.0 1308.0
DYD1_k127_6142252_1 that it carries out the mismatch recognition step. This protein has a weak ATPase activity K03555 - - 1.486e-248 797.0
DYD1_k127_6142252_2 - - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001854 524.0
DYD1_k127_6142252_3 Haem-degrading - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002691 367.0
DYD1_k127_6142252_4 Catalyzes the isomerization of sedoheptulose 7-phosphate in D-glycero-D-manno-heptose 7-phosphate K03271 - 5.3.1.28 0.0000000000000000000000000000000000000000000000000000005515 200.0
DYD1_k127_6150079_0 Phosphoglucose isomerase K01810,K13810 - 2.2.1.2,5.3.1.9 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000909 543.0
DYD1_k127_6150079_1 Nicotinamidase K08281 GO:0003674,GO:0003824,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006139,GO:0006725,GO:0006732,GO:0006733,GO:0006753,GO:0006766,GO:0006767,GO:0006769,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0008936,GO:0009058,GO:0009108,GO:0009117,GO:0009165,GO:0009820,GO:0009987,GO:0016787,GO:0016810,GO:0016811,GO:0017144,GO:0018130,GO:0019362,GO:0019363,GO:0019365,GO:0019438,GO:0019637,GO:0034641,GO:0034654,GO:0043094,GO:0043173,GO:0043603,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0044424,GO:0044464,GO:0046483,GO:0051186,GO:0051188,GO:0055086,GO:0071704,GO:0072524,GO:0072525,GO:0090407,GO:1901293,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576 3.5.1.19 0.0000000000000000000000000000000000000000000000000001047 191.0
DYD1_k127_6150079_2 Catalyzes the synthesis of beta-nicotinate D- ribonucleotide from nicotinate and 5-phospho-D-ribose 1-phosphate at the expense of ATP K00763 - 6.3.4.21 0.000000000000000000000000000000000001216 154.0
DYD1_k127_6150079_3 TIGRFAM cell shape determining protein, MreB Mrl family K03569 - - 0.000000000000000000000001357 107.0
DYD1_k127_6153679_0 Produces ATP from ADP in the presence of a proton gradient across the membrane. The catalytic sites are hosted primarily by the beta subunits K02112 - 3.6.3.14 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002072 417.0
DYD1_k127_6153679_1 - - - - 0.00001088 51.0
DYD1_k127_6162894_0 Carboxypeptidase regulatory-like domain - - - 0.00000000000000000000000000000000000000001732 163.0
DYD1_k127_6162894_1 Belongs to the CDP-alcohol phosphatidyltransferase class-I family K00995 GO:0006629,GO:0006644,GO:0006650,GO:0006793,GO:0006796,GO:0008150,GO:0008152,GO:0008610,GO:0008654,GO:0009058,GO:0009987,GO:0019637,GO:0044237,GO:0044238,GO:0044249,GO:0044255,GO:0045017,GO:0046474,GO:0046486,GO:0071704,GO:0090407,GO:1901576 2.7.8.5 0.0000000000000000000000000000000000001112 151.0
DYD1_k127_6162894_3 - - - - 0.00000004304 55.0
DYD1_k127_6162894_4 Lysin motif - - - 0.000001707 60.0
DYD1_k127_6167695_0 L-asparaginase II - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000003758 306.0
DYD1_k127_6167695_1 DegT/DnrJ/EryC1/StrS aminotransferase family - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000001055 282.0
DYD1_k127_6167695_2 Catalyzes the synthesis of GMP from XMP K01951 GO:0003674,GO:0003824,GO:0003921,GO:0003922,GO:0006139,GO:0006163,GO:0006164,GO:0006177,GO:0006725,GO:0006753,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009116,GO:0009117,GO:0009119,GO:0009123,GO:0009124,GO:0009126,GO:0009127,GO:0009150,GO:0009152,GO:0009156,GO:0009161,GO:0009163,GO:0009165,GO:0009167,GO:0009168,GO:0009259,GO:0009260,GO:0009987,GO:0016874,GO:0016879,GO:0016884,GO:0018130,GO:0019438,GO:0019637,GO:0019693,GO:0034404,GO:0034641,GO:0034654,GO:0042278,GO:0042451,GO:0042455,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0044283,GO:0046037,GO:0046128,GO:0046129,GO:0046390,GO:0046483,GO:0055086,GO:0071704,GO:0072521,GO:0072522,GO:0090407,GO:1901068,GO:1901070,GO:1901135,GO:1901137,GO:1901293,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576,GO:1901657,GO:1901659 6.3.5.2 0.00000000000000000000000002411 116.0
DYD1_k127_6167695_3 3D domain - - - 0.0000000000000000002 95.0
DYD1_k127_6167695_4 PFAM Pyrrolo-quinoline quinone - - - 0.0000000000000001633 85.0
DYD1_k127_6181272_0 Involved in the restart of stalled replication forks. Recognizes and binds the arrested nascent DNA chain at stalled replication forks. It can open the DNA duplex, via its helicase activity, and promote assembly of the primosome and loading of the major replicative helicase DnaB onto DNA K04066 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000109 627.0
DYD1_k127_6181272_1 Catalyzes two steps in the biosynthesis of coenzyme A. In the first step cysteine is conjugated to 4'-phosphopantothenate to form 4-phosphopantothenoylcysteine, in the latter compound is decarboxylated to form 4'-phosphopantotheine K01598,K13038 - 4.1.1.36,6.3.2.5 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001267 366.0
DYD1_k127_6181272_2 Uracil DNA glycosylase superfamily K21929 - 3.2.2.27 0.0000000000000000000000000000000000000000000000000000000000000001029 229.0
DYD1_k127_6181272_3 Catalyzes the N-acylation of UDP-3-O-acylglucosamine using 3-hydroxyacyl-ACP as the acyl donor. Is involved in the biosynthesis of lipid A, a phosphorylated glycolipid that anchors the lipopolysaccharide to the outer membrane of the cell K02536 - 2.3.1.191 0.0000000000000000000000000000000006826 136.0
DYD1_k127_6186445_0 Belongs to the glyceraldehyde-3-phosphate dehydrogenase family K00134 - 1.2.1.12 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006719 469.0
DYD1_k127_6186445_1 Belongs to the phosphoglycerate kinase family K00927,K01803 - 2.7.2.3,5.3.1.1 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002977 451.0
DYD1_k127_6186445_2 Involved in the gluconeogenesis. Catalyzes stereospecifically the conversion of dihydroxyacetone phosphate (DHAP) to D-glyceraldehyde-3-phosphate (G3P) K01803 - 5.3.1.1 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000001226 302.0
DYD1_k127_6186445_3 AcrB/AcrD/AcrF family K03296 - - 0.000000000000000000000000000000000000000000000000000000000000000003339 250.0
DYD1_k127_6186445_4 Preprotein translocase SecG subunit K03075 - - 0.0000002574 57.0
DYD1_k127_619054_0 Bacterial regulatory protein, Fis family - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001941 467.0
DYD1_k127_619054_1 PFAM D-Ala-D-Ala carboxypeptidase 3 (S13) family K07259 - 3.4.16.4 0.000000000000000000000000000000000000001383 163.0
DYD1_k127_619054_2 Responsible for removing an oxidatively damaged form of guanine (7,8-dihydro-8-oxoguanine 7-oxoG) from DNA. Also nicks DNA at apurinic apyrimidinic sites (AP sites) K03653 - 4.2.99.18 0.000000000000000000000000000000001074 138.0
DYD1_k127_619054_3 Pilus assembly protein PilX K02673 - - 0.0000000000000002168 92.0
DYD1_k127_619054_4 Pfam:N_methyl_2 K02671 - - 0.0000004792 57.0
DYD1_k127_619054_5 pilus assembly protein PilW K02672 - - 0.00008589 53.0
DYD1_k127_6204267_0 NAD NADP transhydrogenase alpha subunit K00324 - 1.6.1.2 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009084 374.0
DYD1_k127_6204267_1 The transhydrogenation between NADH and NADP is coupled to respiration and ATP hydrolysis and functions as a proton pump across the membrane K00325 - 1.6.1.2 0.0000000000000000000000000000000000000000000000004163 179.0
DYD1_k127_6204267_2 4TM region of pyridine nucleotide transhydrogenase, mitoch K00324 - 1.6.1.2 0.0000000000000000000000000000000001136 135.0
DYD1_k127_6225330_0 PFAM FAD dependent oxidoreductase - - - 6.243e-218 686.0
DYD1_k127_6225330_1 amino acid peptide transporter K03305 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006466 481.0
DYD1_k127_6225330_10 oxidation-reduction process - GO:0003674,GO:0003824,GO:0003857,GO:0006082,GO:0006629,GO:0006631,GO:0008150,GO:0008152,GO:0009987,GO:0016491,GO:0016614,GO:0016616,GO:0019752,GO:0032787,GO:0043436,GO:0044237,GO:0044238,GO:0044255,GO:0044281,GO:0055114,GO:0071704 - 0.0000000000000009281 83.0
DYD1_k127_6225330_12 - - - - 0.0000000004745 62.0
DYD1_k127_6225330_14 - - - - 0.0007619 44.0
DYD1_k127_6225330_2 heat shock protein binding K05516 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001072 340.0
DYD1_k127_6225330_3 Amidinotransferase K01482 - 3.5.3.18 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002458 312.0
DYD1_k127_6225330_4 Belongs to the peptidase S41A family K03797 - 3.4.21.102 0.0000000000000000000000000000000000000000000000000000000000000000000000913 256.0
DYD1_k127_6225330_5 Arsenical pump-driving ATPase K01551 - 3.6.3.16 0.000000000000000000000000000000000000000000000000000000000005696 219.0
DYD1_k127_6225330_6 TIGRFAM arsenite-activated ATPase (arsA) K01551 - 3.6.3.16 0.00000000000000000000000000000000000000000000000000000000084 213.0
DYD1_k127_6225330_7 Ferritin-like domain K03594 - 1.16.3.1 0.00000000000000000000000000000000000000000000000000000008739 201.0
DYD1_k127_6225330_8 Cell shape determining protein, MreB Mrl family K03569 - - 0.0000000000000000000000000000000000000000000000000004935 194.0
DYD1_k127_6225330_9 Eukaryotic DNA topoisomerase I, catalytic core K03168 - 5.99.1.2 0.00000000000000000000000000000000000000003248 156.0
DYD1_k127_6230327_0 Required for the export of heme to the periplasm for the biogenesis of c-type cytochromes K02194 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000001919 301.0
DYD1_k127_6230327_1 once thought to export heme, this seems not to be the case, but its exact role is uncertain. Responsible for energy coupling to the transport system K02193 - 3.6.3.41 0.000000000000000000000000000000000000000000000000000000000000000000005222 244.0
DYD1_k127_6232870_0 3-beta hydroxysteroid dehydrogenase/isomerase family - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005661 498.0
DYD1_k127_6232870_1 Polysaccharide biosynthesis protein K17947 - 5.1.3.25 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009919 412.0
DYD1_k127_6232870_10 Dolichyl-phosphate-mannose-protein mannosyltransferase - - - 0.0003636 53.0
DYD1_k127_6232870_2 Pfam Glycosyl transferases group 1 - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000001005 285.0
DYD1_k127_6232870_3 Belongs to the DegT DnrJ EryC1 family - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000002161 256.0
DYD1_k127_6232870_4 transferase activity, transferring glycosyl groups - - - 0.0000000000000000000000000000000000000000000000000000000000000000000003299 254.0
DYD1_k127_6232870_5 maltose O-acetyltransferase activity - - - 0.000000000000000000000000000000000000000000000000000006204 203.0
DYD1_k127_6232870_6 Methyltransferase domain - - - 0.0000000000000000000000000000000000000000000002814 179.0
DYD1_k127_6232870_7 Glycosyltransferase like family 2 - - - 0.000000000000000000000000000000000000000000005008 175.0
DYD1_k127_6232870_8 PFAM glycosyl transferase family 2 - - - 0.0000000000000000000000000000000000001917 156.0
DYD1_k127_6232870_9 Asparagine synthase K01953 - 6.3.5.4 0.000002436 52.0
DYD1_k127_6235576_0 Part of the ABC transporter complex PstSACB involved in phosphate import. Responsible for energy coupling to the transport system K02036 - 3.6.3.27 0.00000000000000000000000000000000000000000000000000000000000000000000000000000005522 270.0
DYD1_k127_6235576_1 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase K07636 - 2.7.13.3 0.000000000000000000000000000000000000000000000000000000000000000000000001098 259.0
DYD1_k127_6235576_2 phosphate regulon transcriptional regulatory protein PhoB K07657 - - 0.00000000000000000000000000000000000000000000000000005125 196.0
DYD1_k127_6235576_3 PhoU domain K02039 - - 0.0000000000000000000000000000000000000000000000002911 183.0
DYD1_k127_6248652_0 Ftsk_gamma K03466 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000061 619.0
DYD1_k127_6248652_1 Peptide chain release factor 2 directs the termination of translation in response to the peptide chain termination codons UGA and UAA K02836 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002772 412.0
DYD1_k127_6248652_2 Bacterial extracellular solute-binding protein K02020 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000001153 286.0
DYD1_k127_6248652_3 PFAM Nitrilase cyanide hydratase and apolipoprotein N-acyltransferase K03820 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000001557 270.0
DYD1_k127_6248652_4 Cysteine dioxygenase type I K00456 - 1.13.11.20 0.00000000000000000000001375 108.0
DYD1_k127_6248652_5 Tetratricopeptide repeat - - - 0.000000000000000000001837 109.0
DYD1_k127_6248652_6 Tetratricopeptide repeat - - - 0.000001354 61.0
DYD1_k127_6248652_7 NfeD-like C-terminal, partner-binding K07403 - - 0.00005762 51.0
DYD1_k127_6258203_0 domain protein - - - 0.00000000000000000000000000000000000000000000000000000000000003538 239.0
DYD1_k127_6275783_0 Radical SAM - - - 5.219e-217 691.0
DYD1_k127_6275783_1 UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase, LpxD K02536 - 2.3.1.191 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000356 297.0
DYD1_k127_6275783_2 Involved in the biosynthesis of lipid A, a phosphorylated glycolipid that anchors the lipopolysaccharide to the outer membrane of the cell K00677 - 2.3.1.129 0.0000000000000000000000000000000000000000000000000000000000000000001127 238.0
DYD1_k127_6275783_3 Condensation of UDP-2,3-diacylglucosamine and 2,3- diacylglucosamine-1-phosphate to form lipid A disaccharide, a precursor of lipid A, a phosphorylated glycolipid that anchors the lipopolysaccharide to the outer membrane of the cell K00748 - 2.4.1.182 0.0000000000000000003429 92.0
DYD1_k127_6280349_0 Putative glutamine amidotransferase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003556 425.0
DYD1_k127_6280349_1 Peptidase C14 caspase catalytic subunit p20 - - - 0.000000000000000000000000000000000000000000000009136 183.0
DYD1_k127_6289223_0 TonB-dependent Receptor Plug Domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003314 597.0
DYD1_k127_6289223_1 Tetratricopeptide repeat - - - 0.00000000000000000000000000000000000001461 155.0
DYD1_k127_6304626_0 efflux transmembrane transporter activity - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003091 576.0
DYD1_k127_6304626_1 Monooxygenase fad-binding protein - - - 0.0000000000000001417 84.0
DYD1_k127_6304626_2 MacB-like periplasmic core domain - - - 0.000001835 49.0
DYD1_k127_6308550_0 Tetratricopeptide repeat - - - 0.000000000000000000000000000000000000000000008299 179.0
DYD1_k127_6310326_0 Pyridoxal-phosphate dependent enzyme K01754 - 4.3.1.19 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001997 342.0
DYD1_k127_6310326_1 Catalyzes the radical-mediated insertion of two sulfur atoms into the C-6 and C-8 positions of the octanoyl moiety bound to the lipoyl domains of lipoate-dependent enzymes, thereby converting the octanoylated domains into lipoylated derivatives K03644 GO:0003674,GO:0003824,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006082,GO:0006464,GO:0006629,GO:0006631,GO:0006633,GO:0006732,GO:0006790,GO:0006807,GO:0008150,GO:0008152,GO:0008610,GO:0009058,GO:0009106,GO:0009107,GO:0009108,GO:0009249,GO:0009987,GO:0010467,GO:0016053,GO:0016740,GO:0016782,GO:0016783,GO:0016992,GO:0018065,GO:0018130,GO:0018193,GO:0018205,GO:0019538,GO:0019752,GO:0032787,GO:0036211,GO:0043170,GO:0043412,GO:0043436,GO:0044237,GO:0044238,GO:0044249,GO:0044255,GO:0044260,GO:0044267,GO:0044272,GO:0044281,GO:0044283,GO:0044424,GO:0044464,GO:0046394,GO:0046483,GO:0051186,GO:0051188,GO:0051604,GO:0070283,GO:0071704,GO:0072330,GO:1901360,GO:1901362,GO:1901564,GO:1901576 2.8.1.8 0.0000000000000000000000000000000000000000000000000000000000000001565 225.0
DYD1_k127_6310326_2 Catalyzes the transfer of endogenously produced octanoic acid from octanoyl-acyl-carrier-protein onto the lipoyl domains of lipoate-dependent enzymes. Lipoyl-ACP can also act as a substrate although octanoyl-ACP is likely to be the physiological substrate K03644,K03801 GO:0003674,GO:0003824,GO:0006464,GO:0006807,GO:0008150,GO:0008152,GO:0009249,GO:0009987,GO:0010467,GO:0016740,GO:0016746,GO:0016747,GO:0018065,GO:0018193,GO:0018205,GO:0019538,GO:0033819,GO:0036211,GO:0043170,GO:0043412,GO:0044237,GO:0044238,GO:0044260,GO:0044267,GO:0051604,GO:0071704,GO:1901564 2.3.1.181,2.8.1.8 0.000000000000000000000000000000000000000000000000000000002647 207.0
DYD1_k127_6310326_3 Belongs to the ompA family - - - 0.00000000000000000000000001148 121.0
DYD1_k127_6310326_4 PFAM von Willebrand factor type A K07114 - - 0.000000000009297 77.0
DYD1_k127_6318597_0 Asparagine synthase - - - 1.514e-239 756.0
DYD1_k127_6318597_1 Glycosyl transferases group 1 - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006703 424.0
DYD1_k127_6318597_2 Methyltransferase FkbM domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000002768 261.0
DYD1_k127_6318597_3 Pfam Methyltransferase - - - 0.00000000000000000000000000000000000000000000000000000000000000000002048 238.0
DYD1_k127_6318597_4 NAD dependent epimerase/dehydratase family - - - 0.0000000000000000000000000000002849 133.0
DYD1_k127_6318597_5 PFAM Glycosyl transferases group 1 - - - 0.00000000000000000000000000001526 130.0
DYD1_k127_6318597_6 Methyltransferase domain - - - 0.00000000000005462 83.0
DYD1_k127_6324801_0 ATPase, P-type (transporting), HAD superfamily, subfamily IC K17686 - 3.6.3.54 0.0 1071.0
DYD1_k127_6324801_1 Multicopper oxidase K22348 - 1.16.3.3 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003944 556.0
DYD1_k127_6324801_2 Outer membrane efflux protein K15725 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001587 364.0
DYD1_k127_6324801_3 exo-alpha-(2->6)-sialidase activity - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005668 360.0
DYD1_k127_6324801_4 Transcription termination factor nusG - - - 0.0000000000000000005369 94.0
DYD1_k127_6324801_5 KOW (Kyprides, Ouzounis, Woese) motif. K05785 - - 0.000000001409 60.0
DYD1_k127_6334251_0 PKS_DH K20788 - - 2.639e-294 941.0
DYD1_k127_6334251_1 synthase - - - 0.000000000000000000000000000000000000000000000000000000000000000334 231.0
DYD1_k127_6347115_0 ATPase involved in DNA repair - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001863 590.0
DYD1_k127_6347115_1 peptidase M24B X-Pro dipeptidase aminopeptidase domain protein K01262 - 3.4.11.9 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000212 445.0
DYD1_k127_6347115_2 SMART tyrosine protein kinase K12132 - 2.7.11.1 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004905 372.0
DYD1_k127_6347115_3 ribosome binding - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000006645 295.0
DYD1_k127_6347115_4 Phospholipase D. Active site motifs. - - - 0.00000000000000000000000000000000002301 156.0
DYD1_k127_636506_0 MatE - - - 1.163e-213 672.0
DYD1_k127_636506_1 nuclease activity K02335 GO:0003674,GO:0003676,GO:0003677,GO:0003824,GO:0003887,GO:0004518,GO:0004527,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006139,GO:0006259,GO:0006260,GO:0006261,GO:0006281,GO:0006284,GO:0006725,GO:0006807,GO:0006950,GO:0006974,GO:0008150,GO:0008152,GO:0008408,GO:0008409,GO:0009058,GO:0009059,GO:0009987,GO:0016740,GO:0016772,GO:0016779,GO:0016787,GO:0016788,GO:0018130,GO:0019438,GO:0033554,GO:0034061,GO:0034641,GO:0034645,GO:0034654,GO:0043170,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044271,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0050896,GO:0051716,GO:0071704,GO:0071897,GO:0090304,GO:0090305,GO:0097159,GO:0140097,GO:1901360,GO:1901362,GO:1901363,GO:1901576 2.7.7.7 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000114 364.0
DYD1_k127_636506_2 beta-propeller repeat - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005411 317.0
DYD1_k127_636506_3 YCII-related domain - - - 0.0000000000000000000000000000000000000000000000000000000000000005422 221.0
DYD1_k127_6412079_0 RmuC family K09760 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001913 481.0
DYD1_k127_6412079_1 The heterodimer acts as both an ATP-dependent DNA helicase and an ATP-dependent, dual-direction single-stranded exonuclease. Recognizes the chi site generating a DNA molecule suitable for the initiation of homologous recombination. The AddB nuclease domain is not required for chi fragment generation K16899 - 3.6.4.12 0.00000000000000000000000006413 125.0
DYD1_k127_6412079_2 Protein of unknown function (DUF962) - - - 0.00000000000000001632 83.0
DYD1_k127_6412079_3 DNA polymerase family B, exonuclease domain K07501 - - 0.00000000003132 74.0
DYD1_k127_6423703_0 DNA ligase that catalyzes the formation of phosphodiester linkages between 5'-phosphoryl and 3'-hydroxyl groups in double-stranded DNA using NAD as a coenzyme and as the energy source for the reaction. It is essential for DNA replication and repair of damaged DNA K01972 - 6.5.1.2 4.13e-202 649.0
DYD1_k127_6423703_1 peptidase dimerisation domain protein - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004994 384.0
DYD1_k127_6423703_10 - - - - 0.0001534 49.0
DYD1_k127_6423703_2 chaperone-mediated protein folding K12132 - 2.7.11.1 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000008964 301.0
DYD1_k127_6423703_3 Pyridoxal 5'-phosphate (PLP)-binding protein, which is involved in PLP homeostasis K06997 GO:0003674,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0008144,GO:0019842,GO:0030170,GO:0036094,GO:0043167,GO:0043168,GO:0044464,GO:0048037,GO:0050662,GO:0070279,GO:0097159,GO:1901363 - 0.000000000000000000000000000000000000000000000000000000000004999 215.0
DYD1_k127_6423703_4 Acetyltransferase (GNAT) family - - - 0.000000000000000000000000000000000000001998 156.0
DYD1_k127_6423703_5 Histidine kinase - - - 0.000000000000000000000000000000864 133.0
DYD1_k127_6423703_6 Belongs to the UPF0235 family K09131 - - 0.00000000000000000003109 95.0
DYD1_k127_6423703_7 PFAM YGGT family K02221 - - 0.000000001797 66.0
DYD1_k127_6423703_8 heat shock protein binding - - - 0.000009591 56.0
DYD1_k127_6423703_9 Bacterial regulatory protein, Fis family - - - 0.00003974 51.0
DYD1_k127_6432775_0 Cytochrome c oxidase is the component of the respiratory chain that catalyzes the reduction of oxygen to water. Subunits 1- 3 form the functional core of the enzyme complex. CO I is the catalytic subunit of the enzyme. Electrons originating in cytochrome c are transferred via the copper A center of subunit 2 and heme A of subunit 1 to the bimetallic center formed by heme A3 and copper B K02274 - 1.9.3.1 9.732e-274 850.0
DYD1_k127_6432775_1 Subunits I and II form the functional core of the enzyme complex. Electrons originating in cytochrome c are transferred via heme a and Cu(A) to the binuclear center formed by heme a3 and Cu(B) K02275,K17223 GO:0005575,GO:0005623,GO:0005886,GO:0005887,GO:0006091,GO:0006119,GO:0006139,GO:0006163,GO:0006725,GO:0006753,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0009117,GO:0009123,GO:0009126,GO:0009141,GO:0009144,GO:0009150,GO:0009161,GO:0009167,GO:0009199,GO:0009205,GO:0009259,GO:0009319,GO:0009987,GO:0015980,GO:0016020,GO:0016021,GO:0016310,GO:0017144,GO:0019637,GO:0019693,GO:0022900,GO:0022904,GO:0031224,GO:0031226,GO:0032991,GO:0034641,GO:0042773,GO:0044237,GO:0044238,GO:0044281,GO:0044425,GO:0044459,GO:0044464,GO:0045333,GO:0046034,GO:0046483,GO:0055086,GO:0055114,GO:0070069,GO:0071704,GO:0071944,GO:0072521,GO:0098796,GO:1901135,GO:1901360,GO:1901564,GO:1902494 1.9.3.1 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005183 356.0
DYD1_k127_6432775_2 signal sequence binding K07152 - - 0.0000000000000000000000000000003384 125.0
DYD1_k127_6432775_3 PFAM cytochrome c oxidase, subunit III K02276 - 1.9.3.1 0.0000002018 53.0
DYD1_k127_6432775_4 Subunits I and II form the functional core of the enzyme complex. Electrons originating in cytochrome c are transferred via heme a and Cu(A) to the binuclear center formed by heme a3 and Cu(B) K02275 - 1.9.3.1 0.0001212 48.0
DYD1_k127_6448505_0 ATPases associated with a variety of cellular activities K02003 - - 0.00000000000000000000000000000000000000000000000000000000000000003346 230.0
DYD1_k127_6448505_1 Protein of unknown function (DUF1003) - - - 0.0000000000000000000000000000000000000000000000000000000000004263 220.0
DYD1_k127_6448505_2 MacB-like periplasmic core domain K02004 - - 0.000000000000000000000000000000000000000000000000000000003192 218.0
DYD1_k127_6448505_3 Adenylyl- / guanylyl cyclase, catalytic domain - - - 0.00000000000000000000000000000000000000000000000001297 186.0
DYD1_k127_6448505_4 Transferrin receptor-like dimerisation domain K01301 - 3.4.17.21 0.000000000000000000000000000000000000002711 153.0
DYD1_k127_6448505_5 HAD-superfamily hydrolase subfamily IA, variant 3 K01091,K01838 - 3.1.3.18,5.4.2.6 0.0000000000000000000000000000000009096 139.0
DYD1_k127_6448505_6 histone H2A K63-linked ubiquitination - - - 0.00000000000000009347 87.0
DYD1_k127_645758_0 cellulose binding - - - 0.0 1186.0
DYD1_k127_645758_1 homoserine kinase activity K00823,K07250 - 2.6.1.19,2.6.1.22 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002349 509.0
DYD1_k127_645758_2 homoserine kinase activity K00823,K07250 - 2.6.1.19,2.6.1.22 0.0000000000000000000000000000000000000000000000000000000000000000006374 240.0
DYD1_k127_645758_3 GDSL-like Lipase/Acylhydrolase - - - 0.000000000000000000000000000000000000000001644 164.0
DYD1_k127_645758_4 serine threonine protein kinase afsK - - - 0.000002064 51.0
DYD1_k127_6458517_0 Insulinase (Peptidase family M16) - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001073 386.0
DYD1_k127_6458517_1 Peptidase M16 inactive domain K07263 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008536 316.0
DYD1_k127_6458517_2 Trypsin-like peptidase domain - - - 0.0000000000000000000000000000000000000000000000000000000007016 216.0
DYD1_k127_6458517_3 Belongs to the ompA family - - - 0.0006313 48.0
DYD1_k127_6488316_0 iron ion homeostasis - - - 0.0000000000000000000001257 111.0
DYD1_k127_6488316_1 helix_turn_helix gluconate operon transcriptional repressor K07979 - - 0.000000000000000003093 89.0
DYD1_k127_6488316_2 oxidoreductase activity K12511 - - 0.000000000000000005237 96.0
DYD1_k127_6488316_3 von Willebrand factor, type A - - - 0.000000000000001196 87.0
DYD1_k127_6491049_0 COG0719 ABC-type transport system involved in Fe-S cluster assembly permease component K09014 - - 2.286e-254 790.0
DYD1_k127_6491049_1 ABC transporter K02056 - 3.6.3.17 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006426 539.0
DYD1_k127_6491049_10 Belongs to the binding-protein-dependent transport system permease family K02057 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000273 295.0
DYD1_k127_6491049_11 Phosphoribulokinase / Uridine kinase family K00855,K00876 GO:0003674,GO:0003824,GO:0004849,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006139,GO:0006206,GO:0006213,GO:0006220,GO:0006221,GO:0006222,GO:0006725,GO:0006753,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0008655,GO:0009058,GO:0009112,GO:0009116,GO:0009117,GO:0009119,GO:0009123,GO:0009124,GO:0009129,GO:0009130,GO:0009156,GO:0009161,GO:0009163,GO:0009165,GO:0009173,GO:0009174,GO:0009218,GO:0009220,GO:0009224,GO:0009259,GO:0009260,GO:0009987,GO:0015949,GO:0016301,GO:0016310,GO:0016740,GO:0016772,GO:0016773,GO:0018130,GO:0019205,GO:0019206,GO:0019438,GO:0019637,GO:0019693,GO:0034404,GO:0034641,GO:0034654,GO:0042455,GO:0043094,GO:0043097,GO:0043174,GO:0043771,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0044283,GO:0044424,GO:0044444,GO:0044464,GO:0046035,GO:0046049,GO:0046131,GO:0046132,GO:0046134,GO:0046390,GO:0046483,GO:0055086,GO:0071704,GO:0072527,GO:0072528,GO:0090407,GO:1901135,GO:1901137,GO:1901293,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576,GO:1901657,GO:1901659 2.7.1.19,2.7.1.48 0.0000000000000000000000000000000000000000000000000000000000000000000000006553 251.0
DYD1_k127_6491049_12 Bacterial regulatory proteins, tetR family - - - 0.0000000000000000000000000000000000000000000000000000000000000000009965 237.0
DYD1_k127_6491049_13 Catalyzes the formation of 4-diphosphocytidyl-2-C- methyl-D-erythritol from CTP and 2-C-methyl-D-erythritol 4- phosphate (MEP) K00991 GO:0003674,GO:0003824,GO:0016740,GO:0016772,GO:0016779,GO:0050518,GO:0070567 2.7.7.60 0.0000000000000000000000000000000000000000000000000867 187.0
DYD1_k127_6491049_14 - - - - 0.0000000000000000000000000000000000000000000000001031 180.0
DYD1_k127_6491049_15 Involved in the biosynthesis of isopentenyl diphosphate (IPP) and dimethylallyl diphosphate (DMAPP), two major building blocks of isoprenoid compounds. Catalyzes the conversion of 4- diphosphocytidyl-2-C-methyl-D-erythritol 2-phosphate (CDP-ME2P) to 2-C-methyl-D-erythritol 2,4-cyclodiphosphate (ME-CPP) with a corresponding release of cytidine 5-monophosphate (CMP) K01770,K12506 - 2.7.7.60,4.6.1.12 0.0000000000000000000000000000000000000000000000008055 179.0
DYD1_k127_6491049_16 Cytidine and deoxycytidylate deaminase zinc-binding region K01489 - 3.5.4.5 0.0000000000000000000000000000000000000000009504 161.0
DYD1_k127_6491049_17 Protein of unknown function, DUF393 - - - 0.000000000000000000000000000003446 125.0
DYD1_k127_6491049_18 One of the essential components for the initiation of protein synthesis. Stabilizes the binding of IF-2 and IF-3 on the 30S subunit to which N-formylmethionyl-tRNA(fMet) subsequently binds. Helps modulate mRNA selection, yielding the 30S pre- initiation complex (PIC). Upon addition of the 50S ribosomal subunit IF-1, IF-2 and IF-3 are released leaving the mature 70S translation initation complex K02518 - - 0.00000000000000000000000205 103.0
DYD1_k127_6491049_19 2 iron, 2 sulfur cluster binding - - - 0.00000000000000000000001979 105.0
DYD1_k127_6491049_2 Amidohydrolase family K12960 - 3.5.4.28,3.5.4.31 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001504 481.0
DYD1_k127_6491049_20 TIGRFAM SUF system FeS cluster assembly, SufD K09015 - - 0.00000000000241 72.0
DYD1_k127_6491049_21 energy transducer activity K03832 - - 0.000003049 59.0
DYD1_k127_6491049_3 The enzymes which catalyze the reversible phosphorolysis of pyrimidine nucleosides are involved in the degradation of these compounds and in their utilization as carbon and energy sources, or in the rescue of pyrimidine bases for nucleotide synthesis K00756,K00758 - 2.4.2.2,2.4.2.4 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008472 416.0
DYD1_k127_6491049_4 Large family of predicted nucleotide-binding domains - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001571 411.0
DYD1_k127_6491049_5 ATPase activity K09013 GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006790,GO:0008150,GO:0008152,GO:0009314,GO:0009628,GO:0009987,GO:0016043,GO:0016226,GO:0022607,GO:0031163,GO:0044085,GO:0044237,GO:0044424,GO:0044444,GO:0044464,GO:0050896,GO:0051186,GO:0071840 - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003438 378.0
DYD1_k127_6491049_6 PFAM Basic membrane lipoprotein K07335 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002103 334.0
DYD1_k127_6491049_7 The purine nucleoside phosphorylases catalyze the phosphorolytic breakdown of the N-glycosidic bond in the beta- (deoxy)ribonucleoside molecules, with the formation of the corresponding free purine bases and pentose-1-phosphate K00772,K03783 - 2.4.2.1,2.4.2.28 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003625 331.0
DYD1_k127_6491049_8 NmrA-like family K00329,K00356 - 1.6.5.3,1.6.99.3 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003851 329.0
DYD1_k127_6491049_9 PFAM Branched-chain amino acid transport system permease component K02057 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000004756 305.0
DYD1_k127_6494054_0 amino acid transport K03294 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001774 522.0
DYD1_k127_6494054_1 Delta-aminolevulinic acid dehydratase K01698 - 4.2.1.24 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001102 431.0
DYD1_k127_6494054_2 Cys/Met metabolism PLP-dependent enzyme - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003328 382.0
DYD1_k127_6494054_3 Belongs to the glycosyl hydrolase 5 (cellulase A) family K19355 GO:0000272,GO:0003674,GO:0003824,GO:0004553,GO:0004567,GO:0005975,GO:0005976,GO:0008150,GO:0008152,GO:0009056,GO:0009057,GO:0009987,GO:0010412,GO:0015923,GO:0016052,GO:0016787,GO:0016798,GO:0016985,GO:0016998,GO:0043170,GO:0044036,GO:0044237,GO:0044238,GO:0044247,GO:0044248,GO:0044260,GO:0044262,GO:0044264,GO:0044275,GO:0046355,GO:0071554,GO:0071704,GO:1901575 3.2.1.78 0.0000000000000000000000000000000000000000000000002641 198.0
DYD1_k127_6494054_4 Elongation factor SelB, winged helix K03833 - - 0.0000000001119 62.0
DYD1_k127_6494054_5 4-amino-4-deoxy-L-arabinose transferase and related glycosyltransferases of PMT family - - - 0.000007569 59.0
DYD1_k127_649626_0 two component, sigma54 specific, transcriptional regulator, Fis family K07713 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000009722 278.0
DYD1_k127_649626_1 Histidine kinase - - - 0.00000000000000000000000000000000000000000000000000000000003106 225.0
DYD1_k127_649626_2 PFAM regulatory protein LuxR - - - 0.0000000000000000000000000000000000000000000000000000000007813 207.0
DYD1_k127_649626_3 Peptidase M56 - - - 0.0000000000000000000000000000000009155 142.0
DYD1_k127_6500976_0 COGs COG2208 Serine phosphatase RsbU regulator of sigma subunit K01768,K07315 - 3.1.3.3,4.6.1.1 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001362 348.0
DYD1_k127_6500976_1 Peptidase M16 - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008612 329.0
DYD1_k127_6500976_2 Belongs to the peptidase S41A family K03797 - 3.4.21.102 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001412 325.0
DYD1_k127_6500976_3 Zn peptidase K21686 - - 0.000000000000000000000000003689 118.0
DYD1_k127_6500976_4 Insulinase (Peptidase family M16) - - - 0.00000000000000000000131 102.0
DYD1_k127_6500976_6 sequence-specific DNA binding - - - 0.000003341 55.0
DYD1_k127_6511260_0 Elongator protein 3, MiaB family, Radical SAM - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001999 349.0
DYD1_k127_6511260_1 glyoxalase bleomycin resistance protein dioxygenase - - - 0.000002213 55.0
DYD1_k127_6517508_0 Is required not only for elongation of protein synthesis but also for the initiation of all mRNA translation through initiator tRNA(fMet) aminoacylation K01874 - 6.1.1.10 4.169e-194 626.0
DYD1_k127_6517508_1 GTP cyclohydrolase I K00950,K01495 GO:0000166,GO:0001882,GO:0001883,GO:0003674,GO:0003824,GO:0003933,GO:0003934,GO:0005488,GO:0005525,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006066,GO:0006082,GO:0006139,GO:0006575,GO:0006725,GO:0006729,GO:0006732,GO:0006760,GO:0006807,GO:0008150,GO:0008152,GO:0008270,GO:0008616,GO:0009058,GO:0009108,GO:0009116,GO:0009119,GO:0009163,GO:0009987,GO:0016787,GO:0016810,GO:0016814,GO:0017076,GO:0017144,GO:0018130,GO:0019001,GO:0019238,GO:0019438,GO:0019751,GO:0019752,GO:0032549,GO:0032550,GO:0032553,GO:0032555,GO:0032561,GO:0034311,GO:0034312,GO:0034404,GO:0034641,GO:0034654,GO:0035639,GO:0036094,GO:0040007,GO:0042455,GO:0042558,GO:0042559,GO:0043167,GO:0043168,GO:0043169,GO:0043436,GO:0043603,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0044283,GO:0044424,GO:0044444,GO:0044464,GO:0046116,GO:0046146,GO:0046165,GO:0046173,GO:0046483,GO:0046872,GO:0046914,GO:0051186,GO:0051188,GO:0055086,GO:0071704,GO:0097159,GO:0097367,GO:1901135,GO:1901137,GO:1901265,GO:1901360,GO:1901362,GO:1901363,GO:1901564,GO:1901566,GO:1901576,GO:1901615,GO:1901617,GO:1901657,GO:1901659 2.7.6.3,3.5.4.16 0.00000000000000000000000000000000000000000000000000000000000000000000002548 245.0
DYD1_k127_6517508_2 Involved in the biosynthesis of a nickel-pincer cofactor ((SCS)Ni(II) pincer complex). Binds Ni(2 ), and functions in nickel delivery to pyridinium-3,5-bisthiocarboxylic acid mononucleotide (P2TMN), to form the mature cofactor. Is thus probably required for the activation of nickel-pincer cofactor- dependent enzymes K09121 - 4.99.1.12 0.0000000000000000000000000000000000000000000000000000000000000000000007765 244.0
DYD1_k127_6517508_3 hydrolase, TatD family K03424 - - 0.0000000000000000000000000001574 122.0
DYD1_k127_6530024_0 Belongs to the MurCDEF family K01924 - 6.3.2.8 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009491 533.0
DYD1_k127_6530024_1 Cell wall formation K00075 - 1.3.1.98 0.00000000000000000000000000000000000000000000000000007172 199.0
DYD1_k127_6530024_2 Cell wall formation. Catalyzes the transfer of a GlcNAc subunit on undecaprenyl-pyrophosphoryl-MurNAc-pentapeptide (lipid intermediate I) to form undecaprenyl-pyrophosphoryl-MurNAc- (pentapeptide)GlcNAc (lipid intermediate II) K02563 - 2.4.1.227 0.0000000000000000000000000000000000000000005169 164.0
DYD1_k127_6530024_3 Cell division protein FtsQ K03589 - - 0.00008969 51.0
DYD1_k127_6533294_0 lipopolysaccharide transport K22110 - - 3.673e-276 854.0
DYD1_k127_6533294_1 alcohol dehydrogenase - - - 0.0000000000000000000000000000000000000000000000000000001205 198.0
DYD1_k127_6533294_2 mannose-1-phosphate guanylyltransferase activity K00971,K16011 - 2.7.7.13,5.3.1.8 0.0000000000000000000000000000000000000000000000000001772 197.0
DYD1_k127_6534236_0 Pyridoxal-phosphate dependent enzyme K12339 - 2.5.1.47 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004824 375.0
DYD1_k127_6534236_1 Cys Met metabolism K01739 - 2.5.1.48 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005677 356.0
DYD1_k127_6566053_0 Cytochrome c - - - 2.989e-242 775.0
DYD1_k127_6566053_1 TIGRFAM magnesium chelatase, H subunit K03403 - 6.6.1.1 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001531 511.0
DYD1_k127_6566053_2 Component of the ubiquinol-cytochrome c reductase complex (complex III or cytochrome b-c1 complex), which is a respiratory chain that generates an electrochemical potential coupled to ATP synthesis - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008883 464.0
DYD1_k127_6566053_3 Component of the ubiquinol-cytochrome c reductase complex (complex III or cytochrome b-c1 complex), which is a respiratory chain that generates an electrochemical potential coupled to ATP synthesis - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001498 423.0
DYD1_k127_6566053_4 oxidoreductase activity, acting on diphenols and related substances as donors K02636,K03886 - 1.10.9.1 0.0000000000000000000000000000000000000000000000000000000000000003332 228.0
DYD1_k127_6566053_5 Has a glutathione-disulfide oxidoreductase activity in the presence of NADPH and glutathione reductase. Reduces low molecular weight disulfides and proteins - - - 0.000000000003382 69.0
DYD1_k127_6602943_0 Type II/IV secretion system protein K02669 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007144 470.0
DYD1_k127_6602943_1 von Willebrand factor, type A - - - 0.0000000001058 72.0
DYD1_k127_6617512_0 ATPases associated with a variety of cellular activities K02049 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000007525 273.0
DYD1_k127_6617512_1 PFAM binding-protein-dependent transport systems inner membrane component K02050 - - 0.000001064 52.0
DYD1_k127_665173_0 Catalyzes the biosynthesis of agmatine from arginine K01585 - 4.1.1.19 9.68e-232 734.0
DYD1_k127_665173_1 glutamine synthetase K01915 GO:0001968,GO:0003674,GO:0003824,GO:0004356,GO:0005488,GO:0005515,GO:0005575,GO:0005576,GO:0005618,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005886,GO:0006082,GO:0006520,GO:0006541,GO:0006542,GO:0006807,GO:0008150,GO:0008152,GO:0008652,GO:0009058,GO:0009064,GO:0009084,GO:0009405,GO:0009605,GO:0009607,GO:0009893,GO:0009987,GO:0010468,GO:0010604,GO:0010628,GO:0010755,GO:0010756,GO:0010954,GO:0016020,GO:0016053,GO:0016211,GO:0016874,GO:0016879,GO:0016880,GO:0019222,GO:0019752,GO:0019899,GO:0020012,GO:0030162,GO:0030312,GO:0030682,GO:0031323,GO:0031325,GO:0032268,GO:0032270,GO:0035375,GO:0040007,GO:0043207,GO:0043436,GO:0044044,GO:0044237,GO:0044238,GO:0044249,GO:0044281,GO:0044283,GO:0044403,GO:0044413,GO:0044415,GO:0044419,GO:0044424,GO:0044444,GO:0044464,GO:0045862,GO:0046394,GO:0048518,GO:0048522,GO:0050789,GO:0050794,GO:0050896,GO:0051171,GO:0051173,GO:0051246,GO:0051247,GO:0051701,GO:0051704,GO:0051707,GO:0051805,GO:0051807,GO:0051832,GO:0051834,GO:0052173,GO:0052200,GO:0052564,GO:0052572,GO:0060255,GO:0065007,GO:0070613,GO:0071704,GO:0071944,GO:0075136,GO:0080090,GO:1901564,GO:1901566,GO:1901576,GO:1901605,GO:1901607,GO:1903317,GO:1903319 6.3.1.2 2.225e-210 664.0
DYD1_k127_665173_2 Domain of unknown function (DUF5117) - - - 9.459e-195 631.0
DYD1_k127_665173_3 Involved in the regulation of glutamine synthetase GlnA, a key enzyme in the process to assimilate ammonia. When cellular nitrogen levels are high, the C-terminal adenylyl transferase (AT) inactivates GlnA by covalent transfer of an adenylyl group from ATP to specific tyrosine residue of GlnA, thus reducing its activity. Conversely, when nitrogen levels are low, the N-terminal adenylyl removase (AR) activates GlnA by removing the adenylyl group by phosphorolysis, increasing its activity. The regulatory region of GlnE binds the signal transduction protein PII (GlnB) which indicates the nitrogen status of the cell K00982 - 2.7.7.42,2.7.7.89 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007588 353.0
DYD1_k127_665173_4 Deoxyhypusine synthase K00809 GO:0003674,GO:0003824,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006464,GO:0006807,GO:0008150,GO:0008152,GO:0008612,GO:0009058,GO:0009987,GO:0010467,GO:0016740,GO:0016765,GO:0018193,GO:0018205,GO:0019538,GO:0034038,GO:0036211,GO:0043170,GO:0043412,GO:0044237,GO:0044238,GO:0044260,GO:0044267,GO:0044424,GO:0044464,GO:0051604,GO:0071704,GO:1901564 2.5.1.46 0.000000000000000000000000000000000000000000000000000000000000000000000000000000005644 282.0
DYD1_k127_6663842_0 Carboxypeptidase regulatory-like domain - - - 1.282e-227 734.0
DYD1_k127_6663842_1 transcription factor binding K02584,K12146,K12266,K15836,K21009 GO:0000976,GO:0000984,GO:0001017,GO:0001067,GO:0001150,GO:0001158,GO:0003674,GO:0003676,GO:0003677,GO:0003690,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006139,GO:0006351,GO:0006352,GO:0006355,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009889,GO:0009891,GO:0009893,GO:0009987,GO:0010467,GO:0010468,GO:0010556,GO:0010557,GO:0010604,GO:0010628,GO:0016043,GO:0016070,GO:0018130,GO:0019219,GO:0019222,GO:0019438,GO:0022607,GO:0031323,GO:0031325,GO:0031326,GO:0031328,GO:0031334,GO:0032774,GO:0034641,GO:0034645,GO:0034654,GO:0035326,GO:0042802,GO:0043170,GO:0043254,GO:0043565,GO:0043933,GO:0044085,GO:0044087,GO:0044089,GO:0044212,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044271,GO:0044424,GO:0044444,GO:0044464,GO:0045893,GO:0045935,GO:0046483,GO:0048518,GO:0048522,GO:0050789,GO:0050794,GO:0051128,GO:0051130,GO:0051171,GO:0051173,GO:0051252,GO:0051254,GO:0051259,GO:0051260,GO:0051262,GO:0051289,GO:0060255,GO:0065003,GO:0065007,GO:0071704,GO:0071840,GO:0080090,GO:0090304,GO:0097159,GO:0097659,GO:1901360,GO:1901362,GO:1901363,GO:1901576,GO:1902680,GO:1903506,GO:1903508,GO:1990837,GO:2000112,GO:2000142,GO:2000144,GO:2001141 - 4.351e-215 687.0
DYD1_k127_6663842_2 Glycoside Hydrolase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000807 578.0
DYD1_k127_6663842_3 PhoQ Sensor K07640 - 2.7.13.3 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003079 341.0
DYD1_k127_6663842_4 Transcriptional regulatory protein, C terminal K07662 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001904 309.0
DYD1_k127_6663842_5 Glycosyl hydrolases family 16 K01216 - 3.2.1.73 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000003927 300.0
DYD1_k127_6663842_6 phosphatidate phosphatase activity K19302 - 3.6.1.27 0.0000000000000000000000000000000002351 140.0
DYD1_k127_6677335_0 Heparinase II/III-like protein - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004059 338.0
DYD1_k127_6677335_1 Asparagine synthase K01953 - 6.3.5.4 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000099 295.0
DYD1_k127_6677335_2 CDP-Glycerol:Poly(glycerophosphate) glycerophosphotransferase K09809 - 2.7.8.12 0.00000001657 64.0
DYD1_k127_6687410_0 In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity K02335 - 2.7.7.7 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000143 620.0
DYD1_k127_6687410_1 Domain of unknown function (DUF4070) - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000184 480.0
DYD1_k127_6687410_2 AMP-binding enzyme C-terminal domain K00666,K01897 - 6.2.1.3 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002687 429.0
DYD1_k127_6687410_3 including yeast histone deacetylase and acetoin utilization protein - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000001017 299.0
DYD1_k127_6687410_4 Belongs to the aldehyde dehydrogenase family K22187 - - 0.00000000000000000000000000000000000000000000000000000000000000000000005196 247.0
DYD1_k127_6687410_5 PFAM Aminotransferase class-III K01845 - 5.4.3.8 0.00000000000000000000000000000000000000000000000000000000000000002552 235.0
DYD1_k127_6687410_6 phosphorelay sensor kinase activity K07710,K10942 - 2.7.13.3 0.0000000000000000000000000000000000004451 159.0
DYD1_k127_6687410_7 PFAM Iron permease FTR1 - - - 0.0000000000000000000001749 108.0
DYD1_k127_6687410_8 RNA polymerase-associated protein CTR9 homolog K15176 GO:0000122,GO:0000428,GO:0000785,GO:0000993,GO:0001098,GO:0001099,GO:0003674,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005634,GO:0005654,GO:0005694,GO:0006325,GO:0006355,GO:0006357,GO:0006464,GO:0006479,GO:0006807,GO:0006996,GO:0008023,GO:0008150,GO:0008152,GO:0008213,GO:0009889,GO:0009890,GO:0009891,GO:0009892,GO:0009893,GO:0009909,GO:0009910,GO:0009987,GO:0010468,GO:0010556,GO:0010557,GO:0010558,GO:0010604,GO:0010605,GO:0010628,GO:0010629,GO:0010638,GO:0016020,GO:0016043,GO:0016569,GO:0016570,GO:0016571,GO:0016591,GO:0016593,GO:0018022,GO:0018023,GO:0018193,GO:0018205,GO:0019219,GO:0019222,GO:0019538,GO:0019899,GO:0030880,GO:0031056,GO:0031058,GO:0031060,GO:0031062,GO:0031323,GO:0031324,GO:0031325,GO:0031326,GO:0031327,GO:0031328,GO:0031399,GO:0031401,GO:0031974,GO:0031981,GO:0032259,GO:0032268,GO:0032270,GO:0032784,GO:0032786,GO:0032968,GO:0032991,GO:0033043,GO:0033044,GO:0034243,GO:0034968,GO:0035327,GO:0036211,GO:0043170,GO:0043175,GO:0043226,GO:0043227,GO:0043228,GO:0043229,GO:0043231,GO:0043232,GO:0043233,GO:0043412,GO:0043414,GO:0044237,GO:0044238,GO:0044260,GO:0044267,GO:0044422,GO:0044424,GO:0044427,GO:0044428,GO:0044446,GO:0044451,GO:0044464,GO:0044877,GO:0045892,GO:0045893,GO:0045934,GO:0045935,GO:0045944,GO:0048518,GO:0048519,GO:0048522,GO:0048523,GO:0048580,GO:0048581,GO:0048831,GO:0050789,GO:0050793,GO:0050794,GO:0051093,GO:0051128,GO:0051130,GO:0051171,GO:0051172,GO:0051173,GO:0051239,GO:0051241,GO:0051246,GO:0051247,GO:0051252,GO:0051253,GO:0051254,GO:0051276,GO:0051568,GO:0051569,GO:0051571,GO:0055029,GO:0060255,GO:0061695,GO:0065007,GO:0070013,GO:0070063,GO:0071704,GO:0071840,GO:0080090,GO:0080182,GO:1901564,GO:1902275,GO:1902494,GO:1902679,GO:1902680,GO:1903506,GO:1903507,GO:1903508,GO:1905269,GO:1990234,GO:2000026,GO:2000112,GO:2000113,GO:2000241,GO:2000242,GO:2001141,GO:2001252 - 0.0004293 53.0
DYD1_k127_6687410_9 BON domain - - - 0.0007487 49.0
DYD1_k127_6707494_0 Belongs to the FPP GGPP synthase family K02523 - 2.5.1.90 0.00000000000000000000000000000000000000000000000000000000000000000000000006018 258.0
DYD1_k127_6707494_1 PFAM transferase hexapeptide repeat containing protein - - - 0.00000000000000000000000001103 112.0
DYD1_k127_6709864_0 4Fe-4S binding domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004496 476.0
DYD1_k127_6709864_1 - - - - 0.000000000000000000000000000000000000000000000000000000000000007481 223.0
DYD1_k127_6709864_2 L,D-transpeptidase catalytic domain - - - 0.00000000000000000000000000000001368 137.0
DYD1_k127_6709864_3 YtkA-like - - - 0.0000000001405 67.0
DYD1_k127_6728480_0 this subunit has chaperone activity. The binding of ATP and its subsequent hydrolysis by HslU are essential for unfolding of protein substrates subsequently hydrolyzed by HslV. HslU recognizes the N-terminal part of its protein substrates and unfolds these before they are guided to HslV for hydrolysis K03667 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007094 571.0
DYD1_k127_6728480_1 Protein of unknown function (DUF1343) - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002684 427.0
DYD1_k127_6728480_2 Protease subunit of a proteasome-like degradation complex believed to be a general protein degrading machinery K01419 - 3.4.25.2 0.000000000000000000000000000000000000000000000000000000000000000000000005278 246.0
DYD1_k127_6728480_3 oxidoreductase activity, acting on CH-OH group of donors K00059 - 1.1.1.100 0.0000000000000000000000000000000000000000000000000000000000000000004548 238.0
DYD1_k127_6728480_4 peptidase C26 K07010 - - 0.00000000000000000000000000000000000000000000000002518 188.0
DYD1_k127_6728480_5 Involved in DNA repair and RecF pathway recombination K03474,K03584 GO:0008150,GO:0009314,GO:0009628,GO:0050896 2.6.99.2 0.0000000000000000000004614 101.0
DYD1_k127_6728480_6 - - - - 0.000000000000000001431 91.0
DYD1_k127_6728480_7 Small GTP-binding protein - - - 0.000000101 54.0
DYD1_k127_6728480_8 - - - - 0.0002547 45.0
DYD1_k127_6740933_0 A type II topoisomerase that negatively supercoils closed circular double-stranded (ds) DNA in an ATP-dependent manner to modulate DNA topology and maintain chromosomes in an underwound state. Negative supercoiling favors strand separation, and DNA replication, transcription, recombination and repair, all of which involve strand separation. Also able to catalyze the interconversion of other topological isomers of dsDNA rings, including catenanes and knotted rings. Type II topoisomerases break and join 2 DNA strands simultaneously in an ATP-dependent manner K02470 - 5.99.1.3 1.015e-250 788.0
DYD1_k127_6740933_1 Produces ATP from ADP in the presence of a proton gradient across the membrane. The alpha chain is a regulatory subunit K02111 - 3.6.3.14 1.384e-235 741.0
DYD1_k127_6740933_10 Required for the insertion and or proper folding and or complex formation of integral membrane proteins into the membrane. Involved in integration of membrane proteins that insert both dependently and independently of the Sec translocase complex, as well as at least some lipoproteins. Aids folding of multispanning membrane proteins K03217 - - 0.000000000000000000000000000000000000000000000000000000003897 221.0
DYD1_k127_6740933_11 Exhibits a very high intrinsic GTPase hydrolysis rate. Involved in the addition of a carboxymethylaminomethyl (cmnm) group at the wobble position (U34) of certain tRNAs, forming tRNA- cmnm(5)s(2)U34 K03650 - - 0.000000000000000000000000000000000000000000000000000000181 201.0
DYD1_k127_6740933_12 it is required for DNA replication and normal SOS inducibility. RecF binds preferentially to single-stranded, linear DNA. It also seems to bind ATP K03629 GO:0000731,GO:0005575,GO:0005622,GO:0005623,GO:0006139,GO:0006259,GO:0006281,GO:0006302,GO:0006725,GO:0006807,GO:0006950,GO:0006974,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009295,GO:0009987,GO:0018130,GO:0019438,GO:0033554,GO:0034641,GO:0034645,GO:0034654,GO:0043170,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043590,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044271,GO:0044424,GO:0044464,GO:0046483,GO:0050896,GO:0051716,GO:0071704,GO:0071897,GO:0090304,GO:1901360,GO:1901362,GO:1901576 - 0.0000000000000000000000000000000000000000000000000000001883 208.0
DYD1_k127_6740933_13 Exhibits a very high intrinsic GTPase hydrolysis rate. Involved in the addition of a carboxymethylaminomethyl (cmnm) group at the wobble position (U34) of certain tRNAs, forming tRNA- cmnm(5)s(2)U34 K03650 - - 0.00000000000000000000000000000000000000000000000000007453 195.0
DYD1_k127_6740933_14 Methyltransferase domain - - - 0.00000000000000000000000000000000000004802 151.0
DYD1_k127_6740933_15 Could be involved in insertion of integral membrane proteins into the membrane K08998 - - 0.0000000000000000000000000001519 116.0
DYD1_k127_6740933_16 Jag_N K06346 - - 0.00000000000000000000000003674 113.0
DYD1_k127_6740933_17 F(1)F(0) ATP synthase produces ATP from ADP in the presence of a proton or sodium gradient. F-type ATPases consist of two structural domains, F(1) containing the extramembraneous catalytic core and F(0) containing the membrane proton channel, linked together by a central stalk and a peripheral stalk. During catalysis, ATP synthesis in the catalytic domain of F(1) is coupled via a rotary mechanism of the central stalk subunits to proton translocation K02113 - - 0.0000000000000000000000006227 111.0
DYD1_k127_6740933_18 VanZ like family - - - 0.000000000000000000000002068 109.0
DYD1_k127_6740933_19 geranylgeranyl reductase activity K21401 - 1.3.99.38 0.0000000000000007111 81.0
DYD1_k127_6740933_2 NAD-binding protein involved in the addition of a carboxymethylaminomethyl (cmnm) group at the wobble position (U34) of certain tRNAs, forming tRNA-cmnm(5)s(2)U34 K03495 - - 2.805e-213 679.0
DYD1_k127_6740933_20 Belongs to the bacterial ribosomal protein bL34 family K02914 - - 0.0000000000003505 70.0
DYD1_k127_6740933_21 RNaseP catalyzes the removal of the 5'-leader sequence from pre-tRNA to produce the mature 5'-terminus. It can also cleave other RNA substrates such as 4.5S RNA. The protein component plays an auxiliary but essential role in vivo by binding to the 5'-leader sequence and broadening the substrate specificity of the ribozyme K03536 - 3.1.26.5 0.000000009759 62.0
DYD1_k127_6740933_22 F(1)F(0) ATP synthase produces ATP from ADP in the presence of a proton or sodium gradient. F-type ATPases consist of two structural domains, F(1) containing the extramembraneous catalytic core and F(0) containing the membrane proton channel, linked together by a central stalk and a peripheral stalk. During catalysis, ATP synthesis in the catalytic domain of F(1) is coupled via a rotary mechanism of the central stalk subunits to proton translocation K02109 GO:0005575,GO:0005622,GO:0005623,GO:0005886,GO:0016020,GO:0016469,GO:0032991,GO:0044424,GO:0044425,GO:0044459,GO:0044464,GO:0045259,GO:0045260,GO:0071944,GO:0098796,GO:0098797 - 0.0000002897 59.0
DYD1_k127_6740933_23 Component of the F(0) channel, it forms part of the peripheral stalk, linking F(1) to F(0) K02109 - - 0.0002042 49.0
DYD1_k127_6740933_3 Beta-ketoacyl synthase, C-terminal domain K09458 - 2.3.1.179 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001512 512.0
DYD1_k127_6740933_4 Bacterial dnaA protein helix-turn-helix domain K02313 GO:0003674,GO:0003676,GO:0003677,GO:0003688,GO:0003690,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005886,GO:0006139,GO:0006259,GO:0006260,GO:0006261,GO:0006270,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0016020,GO:0034641,GO:0034645,GO:0042802,GO:0043170,GO:0043565,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044424,GO:0044464,GO:0046483,GO:0071704,GO:0071944,GO:0090304,GO:0097159,GO:1901360,GO:1901363,GO:1901576,GO:1990837 - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004676 444.0
DYD1_k127_6740933_5 SPFH domain-Band 7 family - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001948 396.0
DYD1_k127_6740933_6 Confers DNA tethering and processivity to DNA polymerases and other proteins. Acts as a clamp, forming a ring around DNA (a reaction catalyzed by the clamp-loading complex) which diffuses in an ATP-independent manner freely and bidirectionally along dsDNA. Initially characterized for its ability to contact the catalytic subunit of DNA polymerase III (Pol III), a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria K02338 - 2.7.7.7 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004098 317.0
DYD1_k127_6740933_7 Sporulation initiation inhibitor K03496 GO:0008150,GO:0022603,GO:0042173,GO:0042174,GO:0043937,GO:0043939,GO:0045595,GO:0045596,GO:0048519,GO:0048523,GO:0050789,GO:0050793,GO:0050794,GO:0051093,GO:0065007 - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000001445 302.0
DYD1_k127_6740933_8 Produces ATP from ADP in the presence of a proton gradient across the membrane. The gamma chain is believed to be important in regulating ATPase activity and the flow of protons through the CF(0) complex K02115 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000003762 302.0
DYD1_k127_6740933_9 Belongs to the ParB family K03497 - - 0.0000000000000000000000000000000000000000000000000000000000000000000001416 248.0
DYD1_k127_6749481_0 DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates K03046 - 2.7.7.6 0.0 1637.0
DYD1_k127_6749481_1 DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates K03043 - 2.7.7.6 4.516e-300 931.0
DYD1_k127_6750335_0 Carboxyl transferase domain K01966 - 2.1.3.15,6.4.1.3 6.132e-216 677.0
DYD1_k127_6750335_1 Transaldolase is important for the balance of metabolites in the pentose-phosphate pathway K00616,K13810 GO:0003674,GO:0003824,GO:0006002,GO:0006793,GO:0006796,GO:0008150,GO:0008152,GO:0009987,GO:0016829,GO:0016830,GO:0016832,GO:0019637,GO:0044237,GO:0071704,GO:1901135 2.2.1.2,5.3.1.9 0.000000000000000000000000000000000000000000000000001742 184.0
DYD1_k127_6750335_2 Belongs to the UPF0374 family K07586 - - 0.00000000000001424 80.0
DYD1_k127_6753605_0 Cleaves the N-terminal amino acid of tripeptides K01258 - 3.4.11.4 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003178 417.0
DYD1_k127_6753605_1 An essential GTPase that binds both GDP and GTP, with rapid nucleotide exchange. Plays a role in 16S rRNA processing and 30S ribosomal subunit biogenesis and possibly also in cell cycle regulation and energy metabolism K03595 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000002861 273.0
DYD1_k127_6753605_2 Ribosomal protein L11 methyltransferase K02687 - - 0.000000000000000000000000000000007011 136.0
DYD1_k127_6753605_3 Domain of unknown function (DUF374) K09778 - - 0.000000000000000000000000000003844 123.0
DYD1_k127_675539_0 PFAM Phosphopantetheine attachment site - - - 4.683e-199 649.0
DYD1_k127_6764141_0 Aminotransferase class-V - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005887 485.0
DYD1_k127_6764141_1 homoserine dehydrogenase K00003 - 1.1.1.3 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001344 363.0
DYD1_k127_6764141_2 PFAM aminotransferase, class I and II - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001146 359.0
DYD1_k127_6764141_3 Bacterial periplasmic substrate-binding proteins K02029,K02030 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009266 358.0
DYD1_k127_6764141_4 Catalyzes the reductive methylation of 2'-deoxyuridine- 5'-monophosphate (dUMP) to 2'-deoxythymidine-5'-monophosphate (dTMP) while utilizing 5,10-methylenetetrahydrofolate (mTHF) as the methyl donor and reductant in the reaction, yielding dihydrofolate (DHF) as a by-product. This enzymatic reaction provides an intracellular de novo source of dTMP, an essential precursor for DNA biosynthesis K00560 GO:0000287,GO:0003674,GO:0003824,GO:0004799,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006139,GO:0006220,GO:0006221,GO:0006231,GO:0006725,GO:0006753,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0008168,GO:0009058,GO:0009117,GO:0009123,GO:0009124,GO:0009129,GO:0009130,GO:0009157,GO:0009162,GO:0009165,GO:0009176,GO:0009177,GO:0009219,GO:0009221,GO:0009262,GO:0009263,GO:0009265,GO:0009314,GO:0009394,GO:0009628,GO:0009987,GO:0016740,GO:0016741,GO:0018130,GO:0019438,GO:0019637,GO:0019692,GO:0032259,GO:0034641,GO:0034654,GO:0042083,GO:0043167,GO:0043169,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0044424,GO:0044444,GO:0044464,GO:0046073,GO:0046385,GO:0046483,GO:0046872,GO:0050896,GO:0055086,GO:0071704,GO:0072527,GO:0072528,GO:0090407,GO:1901135,GO:1901137,GO:1901293,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576 2.1.1.45 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001011 329.0
DYD1_k127_6764141_5 ABC transporter, ATP-binding protein K10010 - - 0.000000000000000000000000000000000000000000000000000000000000000009532 233.0
DYD1_k127_6764141_6 proline dipeptidase activity K01271 - 3.4.13.9 0.0000000000000000000000000000000000000000000000000000000000000007467 229.0
DYD1_k127_6764141_7 Belongs to the dihydrofolate reductase family K00287 - 1.5.1.3 0.00006935 45.0
DYD1_k127_6768669_0 Catalyzes the conversion of acetate into acetyl-CoA (AcCoA), an essential intermediate at the junction of anabolic and catabolic pathways. AcsA undergoes a two-step reaction. In the first half reaction, AcsA combines acetate with ATP to form acetyl-adenylate (AcAMP) intermediate. In the second half reaction, it can then transfer the acetyl group from AcAMP to the sulfhydryl group of CoA, forming the product AcCoA K01895 - 6.2.1.1 2.497e-307 952.0
DYD1_k127_6768669_1 Carbamoyl-phosphate synthase small chain, CPSase domain K01956 - 6.3.5.5 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001531 449.0
DYD1_k127_6768669_10 Carboxypeptidase regulatory-like domain - - - 0.00000002645 66.0
DYD1_k127_6768669_11 - - - - 0.00008871 55.0
DYD1_k127_6768669_2 Protein of unknown function DUF72 - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000001928 276.0
DYD1_k127_6768669_3 Peptidase family M50 - - - 0.00000000000000000000000000000000000000000000000000001405 201.0
DYD1_k127_6768669_4 Belongs to the peptidase S26 family K03100 - 3.4.21.89 0.0000000000000000000000000000000000000000000000007459 183.0
DYD1_k127_6768669_5 peptidyl-tyrosine sulfation - - - 0.0000000000000000000000000000000000002629 157.0
DYD1_k127_6768669_6 AI-2E family transporter - - - 0.00000000000000000000000000000000002167 151.0
DYD1_k127_6768669_7 bacterial (prokaryotic) histone like domain K03530 - - 0.0000000000000000000000000000000006068 134.0
DYD1_k127_6768669_8 TPR repeat - - - 0.00000000000000000000000000006617 123.0
DYD1_k127_6768669_9 COG0666 FOG Ankyrin repeat K06867 - - 0.00000000000000000002147 105.0
DYD1_k127_6803325_0 DAHP synthetase I family K03856 - 2.5.1.54 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005993 571.0
DYD1_k127_6803325_1 PFAM Taurine catabolism dioxygenase TauD TfdA - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000153 398.0
DYD1_k127_6803325_2 Prephenate dehydrogenase K04517 - 1.3.1.12 0.000000000000000000000000006572 117.0
DYD1_k127_6803325_3 Beta-lactamase superfamily domain - - - 0.0000000000000000000003512 100.0
DYD1_k127_6803325_4 Transposase - - - 0.00000002373 60.0
DYD1_k127_6827748_0 FtsX-like permease family - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002144 415.0
DYD1_k127_6827748_1 COG0577 ABC-type antimicrobial peptide transport system permease component - - - 0.00000000000000000000009994 106.0
DYD1_k127_6832631_0 Catalyzes the conversion of D-ribulose 5-phosphate to formate and 3,4-dihydroxy-2-butanone 4-phosphate K14652 - 3.5.4.25,4.1.99.12 0.000000000000000000000000000000000000000000000000000000000000000009232 233.0
DYD1_k127_6832631_1 Forkhead associated domain - - - 0.000000000000000000000000000000000000000000001924 177.0
DYD1_k127_6860192_0 Catalyzes the 2-thiolation of uridine at the wobble position (U34) of tRNA, leading to the formation of s(2)U34 K00566 - 2.8.1.13 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001182 420.0
DYD1_k127_6860192_1 Catalyzes the attachment of serine to tRNA(Ser). Is also able to aminoacylate tRNA(Sec) with serine, to form the misacylated tRNA L-seryl-tRNA(Sec), which will be further converted into selenocysteinyl-tRNA(Sec) K01875 - 6.1.1.11 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002263 409.0
DYD1_k127_6860192_2 Peptidase family S49 K04773 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004684 424.0
DYD1_k127_6860192_3 CbbQ/NirQ/NorQ C-terminal K04748 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002696 374.0
DYD1_k127_6873976_0 Carboxypeptidase regulatory-like domain - - - 7.414e-201 654.0
DYD1_k127_6873976_1 AMP-dependent synthetase and ligase - - - 0.00000000000000000000000000000000000000000000001386 180.0
DYD1_k127_6897143_0 Domain of unknown function (DUF4162) K01990 - - 0.000000000000000000000000000000000000000000000005737 177.0
DYD1_k127_6897143_1 oxidoreductase activity - - - 0.000000000000000000000000000000000000001041 169.0
DYD1_k127_6897143_2 Excises ethenocytosine and uracil, which can arise by alkylation or deamination of cytosine, respectively, from the corresponding mispairs with guanine in ds-DNA. It is capable of hydrolyzing the carbon-nitrogen bond between the sugar-phosphate backbone of the DNA and the mispaired base. The complementary strand guanine functions in substrate recognition. Required for DNA damage lesion repair in stationary-phase cells K03649 - 3.2.2.28 0.0000000000000000000000000000000393 126.0
DYD1_k127_6902151_0 Carboxypeptidase regulatory-like domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005472 399.0
DYD1_k127_6902151_1 Tetratricopeptide repeat - - - 0.0000000008223 70.0
DYD1_k127_6902151_2 peptidyl-tyrosine sulfation - - - 0.00000000944 67.0
DYD1_k127_6902926_0 Belongs to the aldehyde dehydrogenase family K00128,K22187 - 1.2.1.3 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001534 548.0
DYD1_k127_6902926_1 PFAM Alcohol dehydrogenase GroES-like domain K00008 - 1.1.1.14 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003373 327.0
DYD1_k127_6902926_2 smart pdz dhr glgf K04771,K04772 GO:0003674,GO:0003824,GO:0004175,GO:0004252,GO:0005575,GO:0005623,GO:0006508,GO:0006807,GO:0008150,GO:0008152,GO:0008233,GO:0008236,GO:0016787,GO:0017171,GO:0019538,GO:0030288,GO:0030313,GO:0031975,GO:0042597,GO:0043170,GO:0044238,GO:0044464,GO:0070011,GO:0071704,GO:0140096,GO:1901564 3.4.21.107 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000002735 301.0
DYD1_k127_6907774_0 Luciferase-like monooxygenase K04091 - 1.14.14.5 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004833 344.0
DYD1_k127_6907774_1 Luciferase-like monooxygenase K04091 - 1.14.14.5 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002206 316.0
DYD1_k127_6907774_2 dioxygenase activity K00477 - 1.14.11.18 0.00000000000000000000000001035 120.0
DYD1_k127_6907774_3 - - - - 0.00000005669 59.0
DYD1_k127_6907774_4 Methyltransferase domain - - - 0.0000001665 62.0
DYD1_k127_6907774_5 Methyltransferase domain - - - 0.000003085 57.0
DYD1_k127_6907774_6 Taurine catabolism dioxygenase TauD, TfdA family - - - 0.000003709 58.0
DYD1_k127_6907774_7 cell adhesion involved in biofilm formation - - - 0.0002039 48.0
DYD1_k127_6907774_8 Methyltransferase domain - - - 0.0002437 51.0
DYD1_k127_6920365_0 Bacterial fructose-1,6-bisphosphatase, glpX-encoded K02446 - 3.1.3.11 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008254 420.0
DYD1_k127_6920365_1 Thioredoxin - - - 0.00000000000000000000000000000000000000000001233 175.0
DYD1_k127_6920365_2 Predicted membrane protein (DUF2085) - - - 0.0000000000000000000001358 106.0
DYD1_k127_6920365_3 Transcriptional regulator - - - 0.0000000000001637 75.0
DYD1_k127_6922485_0 Patatin-like phospholipase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000213 537.0
DYD1_k127_6922485_1 Peptidase family M48 - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000979 414.0
DYD1_k127_6922485_2 - - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003849 351.0
DYD1_k127_6922485_3 Cholesterol oxidase K03333 - 1.1.3.6 0.00000000000000000000000000000000000000000000000000000000000000000000000001798 261.0
DYD1_k127_6922485_4 Calcineurin-like phosphoesterase superfamily domain K07098 - - 0.000000000000000000000000000000000000000000000000000000000000000000000001603 256.0
DYD1_k127_6922485_5 Psort location Cytoplasmic, score - - - 0.0000000000000000000000000002264 117.0
DYD1_k127_6922485_6 Belongs to the class-I aminoacyl-tRNA synthetase family K01883 - 6.1.1.16 0.0000000000000000883 85.0
DYD1_k127_6922485_7 Belongs to the ribF family K11753 - 2.7.1.26,2.7.7.2 0.000000000009346 68.0
DYD1_k127_6940587_0 KR domain K00059 - 1.1.1.100 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006312 315.0
DYD1_k127_6940587_1 Belongs to the sigma-70 factor family. ECF subfamily K03088 - - 0.00000000000000000000000000000000000000000000000000000004846 203.0
DYD1_k127_6940587_2 Cupin domain - - - 0.0000000000000000000000000000000000000000000000813 172.0
DYD1_k127_6940587_3 chlorophyll binding - - - 0.000000000000000000000000000000000000000000002295 173.0
DYD1_k127_6940587_4 methyltransferase K18846 - 2.1.1.180 0.00000000000000000000000008977 111.0
DYD1_k127_709457_0 dna ligase - - - 1.059e-220 691.0
DYD1_k127_709457_1 amine dehydrogenase activity - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001143 558.0
DYD1_k127_709457_2 H( )-stimulated, divalent metal cation uptake system - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009208 411.0
DYD1_k127_709457_3 SCO1/SenC K07152,K08976 - - 0.000000000000000000000000000000000000000000000000000000008857 203.0
DYD1_k127_709457_4 SCO1 SenC K07152 - - 0.00000000000000000000000000000000000000000000000957 179.0
DYD1_k127_709457_5 Multicopper oxidase - - - 0.000000000000000001071 93.0
DYD1_k127_709457_6 Acetyltransferase (GNAT) domain - - - 0.00000000000000242 82.0
DYD1_k127_709457_7 Multicopper oxidase - - - 0.000006076 56.0
DYD1_k127_710008_0 Proline racemase K12658 - 5.1.1.8 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002261 446.0
DYD1_k127_710008_1 FAD dependent oxidoreductase K00303,K21061 - 1.5.3.1 0.000000000000000000000003896 104.0
DYD1_k127_710008_2 Transglutaminase-like superfamily - - - 0.000000000000000003432 102.0
DYD1_k127_710008_3 Putative glutamine amidotransferase - - - 0.0000000000005721 78.0
DYD1_k127_710008_4 COG0457 FOG TPR repeat - - - 0.0007036 54.0
DYD1_k127_718821_0 Glycosyltransferase 36 associated - - - 0.0 2498.0
DYD1_k127_718821_1 transcriptional regulatory protein - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000509 323.0
DYD1_k127_718821_2 serine threonine protein kinase K12132 - 2.7.11.1 0.00000000000000000000000000000000000002191 155.0
DYD1_k127_719606_0 ATP-dependent specificity component of the Clp protease. It directs the protease to specific substrates. Can perform chaperone functions in the absence of ClpP K03544 GO:0000166,GO:0000502,GO:0002020,GO:0003674,GO:0003824,GO:0004176,GO:0005488,GO:0005515,GO:0005524,GO:0005575,GO:0005618,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006508,GO:0006807,GO:0008144,GO:0008150,GO:0008152,GO:0008233,GO:0009056,GO:0009057,GO:0009376,GO:0009987,GO:0016462,GO:0016787,GO:0016817,GO:0016818,GO:0016887,GO:0017076,GO:0017111,GO:0019538,GO:0019899,GO:0019904,GO:0030163,GO:0030164,GO:0030312,GO:0030554,GO:0031333,GO:0031597,GO:0032271,GO:0032272,GO:0032553,GO:0032555,GO:0032559,GO:0032991,GO:0035639,GO:0036094,GO:0040007,GO:0042623,GO:0042802,GO:0043167,GO:0043168,GO:0043170,GO:0043254,GO:0043335,GO:0044087,GO:0044237,GO:0044238,GO:0044248,GO:0044257,GO:0044260,GO:0044265,GO:0044267,GO:0044424,GO:0044444,GO:0044445,GO:0044464,GO:0048519,GO:0048523,GO:0050789,GO:0050794,GO:0051128,GO:0051129,GO:0051301,GO:0051704,GO:0065007,GO:0070011,GO:0071704,GO:0071944,GO:0097159,GO:0097367,GO:0097718,GO:0140096,GO:1901265,GO:1901363,GO:1901564,GO:1901565,GO:1901575,GO:1902494,GO:1904949,GO:1905368,GO:1905369 - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004337 544.0
DYD1_k127_719606_1 glutamine-fructose-6-phosphate transaminase (isomerizing) activity K00820 - 2.6.1.16 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001005 376.0
DYD1_k127_719606_2 Cleaves peptides in various proteins in a process that requires ATP hydrolysis. Has a chymotrypsin-like activity. Plays a major role in the degradation of misfolded proteins K01358 - 3.4.21.92 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000001733 299.0
DYD1_k127_719606_3 Involved in protein export. Acts as a chaperone by maintaining the newly synthesized protein in an open conformation. Functions as a peptidyl-prolyl cis-trans isomerase K03545 GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0044424,GO:0044464 - 0.00000000000000000000000000000000000000000000000000000000000000008524 240.0
DYD1_k127_719606_4 GYD domain - - - 0.00000000000000000000000002169 111.0
DYD1_k127_719606_5 PFAM regulatory protein GntR HTH K07979 - - 0.000001012 54.0
DYD1_k127_728248_0 Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released. This sigma factor is the primary sigma factor during exponential growth K03086 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001116 379.0
DYD1_k127_728248_1 Flavin prenyltransferase that catalyzes the synthesis of the prenylated FMN cofactor (prenyl-FMN) for 4-hydroxy-3- polyprenylbenzoic acid decarboxylase UbiD. The prenyltransferase is metal-independent and links a dimethylallyl moiety from dimethylallyl monophosphate (DMAP) to the flavin N5 and C6 atoms of FMN K03186 - 2.5.1.129 0.00000000000000000000000000000000000000000000000000000000000000000000000000001197 265.0
DYD1_k127_728248_2 carboxymethylenebutenolidase activity K01061 - 3.1.1.45 0.000000000000000000000000000000000000000000000000000000000000000000000000001532 259.0
DYD1_k127_728248_3 Belongs to the thioredoxin family K03671 - - 0.00000000000000000000000000000000001436 138.0
DYD1_k127_728248_4 AAA ATPase domain - - - 0.000000000000001058 85.0
DYD1_k127_728248_5 cellulose binding - - - 0.00000348 53.0
DYD1_k127_741975_0 CarboxypepD_reg-like domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006618 390.0
DYD1_k127_741975_1 peptidyl-tyrosine sulfation - - - 0.00000004357 63.0
DYD1_k127_745581_0 Couples transcription and DNA repair by recognizing RNA polymerase (RNAP) stalled at DNA lesions. Mediates ATP-dependent release of RNAP and its truncated transcript from the DNA, and recruitment of nucleotide excision repair machinery to the damaged site K03723 - - 2.915e-292 929.0
DYD1_k127_745581_1 Involved in mRNA degradation. Catalyzes the phosphorolysis of single-stranded polyribonucleotides processively in the 3'- to 5'-direction K00962 - 2.7.7.8 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004034 472.0
DYD1_k127_745581_2 Catalyzes the synthesis of 5,6-dihydrouridine (D), a modified base found in the D-loop of most tRNAs, via the reduction of the C5-C6 double bond in target uridines K05540 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001516 310.0
DYD1_k127_745581_3 PFAM FAD-dependent pyridine nucleotide-disulphide oxidoreductase K03885 - 1.6.99.3 0.0000000000000000000000000000000000000000000000000000000000000000305 241.0
DYD1_k127_745581_4 Forms an intersubunit bridge (bridge B4) with the 23S rRNA of the 50S subunit in the ribosome K02956 GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0005886,GO:0015935,GO:0016020,GO:0022626,GO:0022627,GO:0032991,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:0071944,GO:1990904 - 0.000000000000000000000000000000008676 129.0
DYD1_k127_745581_5 Peptidylprolyl isomerase K03771 - 5.2.1.8 0.0000000000000000000000000008242 126.0
DYD1_k127_745581_6 L,D-transpeptidase catalytic domain - - - 0.000000000001208 80.0
DYD1_k127_75150_0 PFAM glycoside hydrolase, family 77 K00705 - 2.4.1.25 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003469 500.0
DYD1_k127_75150_1 Belongs to the glycosyl hydrolase 13 family K21575 - 3.2.1.135 0.000000000000000000000000007881 117.0
DYD1_k127_758426_0 Tetratricopeptide repeats K12132 - 2.7.11.1 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000228 425.0
DYD1_k127_758426_1 D-alanyl-d-alanine carboxypeptidase K07259 - 3.4.16.4 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003556 327.0
DYD1_k127_758426_2 Phosphomethylpyrimidine kinase K03272 - 2.7.1.167,2.7.7.70 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000002311 297.0
DYD1_k127_758426_3 Catalyzes the stereoinversion of LL-2,6- diaminoheptanedioate (L,L-DAP) to meso-diaminoheptanedioate (meso- DAP), a precursor of L-lysine and an essential component of the bacterial peptidoglycan K01778 - 5.1.1.7 0.00000000000000000000000000000000000000000000000000000000000000007535 233.0
DYD1_k127_758426_4 Glycosyltransferase family 9 (heptosyltransferase) K02849 - - 0.0000000000000000000000000000000000506 149.0
DYD1_k127_758426_5 PQQ-like domain - - - 0.00000000000000000000000000000001134 139.0
DYD1_k127_758426_6 Trm112p-like protein K09791 - - 0.0000000000000000000004258 97.0
DYD1_k127_758426_7 Domain of unknown function (DUF4388) - - - 0.00000000427 65.0
DYD1_k127_777484_0 Belongs to the Glu Leu Phe Val dehydrogenases family K00261 - 1.4.1.3 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002443 501.0
DYD1_k127_777484_1 DNA-dependent ATPase involved in processing of recombination intermediates, plays a role in repairing DNA breaks. Stimulates the branch migration of RecA-mediated strand transfer reactions, allowing the 3' invading strand to extend heteroduplex DNA faster. Binds ssDNA in the presence of ADP but not other nucleotides, has ATPase activity that is stimulated by ssDNA and various branched DNA structures, but inhibited by SSB. Does not have RecA's homology-searching function K04485 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007875 331.0
DYD1_k127_777484_2 Alpha/beta hydrolase family K07020 - - 0.00000000000000000000000000000000000000000004037 169.0
DYD1_k127_777484_3 arsenate reductase (glutaredoxin) activity K00537 - 1.20.4.1 0.000000000000000000000000000007955 121.0
DYD1_k127_777484_4 Catalyzes the interconversion of L-alanine and D- alanine. May also act on other amino acids K01775 - 5.1.1.1 0.000000000000000000000000002349 113.0
DYD1_k127_777484_5 Interacts with outer membrane receptor proteins that carry out high-affinity binding and energy dependent uptake into the periplasmic space of specific substrates. It could act to transduce energy from the cytoplasmic membrane to specific energy- requiring processes in the outer membrane, resulting in the release into the periplasm of ligands bound by these outer membrane proteins K03832 - - 0.00001024 57.0
DYD1_k127_77953_0 Amidohydrolase family K01466 - 3.5.2.5 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003942 525.0
DYD1_k127_77953_1 Belongs to the allantoicase family K01477 - 3.5.3.4 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000789 409.0
DYD1_k127_77953_2 Inorganic pyrophosphatase K01507 - 3.6.1.1 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000002901 284.0
DYD1_k127_77953_3 Trypsin-like peptidase domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000007156 290.0
DYD1_k127_77953_4 xanthine dehydrogenase activity K13479 - 1.17.1.4 0.000000000000000000000000000000000000000000000000000000000000000000000000000785 265.0
DYD1_k127_77953_5 - - - - 0.0000000000000000000000000000000000000000000000000000000000000005665 233.0
DYD1_k127_77953_6 Methylates the class 1 translation termination release factors RF1 PrfA and RF2 PrfB on the glutamine residue of the universally conserved GGQ motif K02493 - 2.1.1.297 0.00000000000000000000000000000000000000000000000000000000000005238 224.0
DYD1_k127_77953_7 [2Fe-2S] binding domain K03518 - 1.2.5.3 0.0000000000000000000000000000000000000000000000000000000000008535 213.0
DYD1_k127_77953_8 integral membrane protein - - - 0.00000001832 64.0
DYD1_k127_825150_0 Bifunctional purine biosynthesis protein PurH K00602 - 2.1.2.3,3.5.4.10 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008559 599.0
DYD1_k127_825150_1 Catalyzes the reversible phosphorylation of S-methyl-5'- thioadenosine (MTA) to adenine and 5-methylthioribose-1-phosphate. Involved in the breakdown of MTA, a major by-product of polyamine biosynthesis. Responsible for the first step in the methionine salvage pathway after MTA has been generated from S- adenosylmethionine. Has broad substrate specificity with 6- aminopurine nucleosides as preferred substrates K00772 - 2.4.2.28 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007407 392.0
DYD1_k127_825150_10 Acyl-CoA dehydrogenase, C-terminal domain - - - 0.000000000000000000000000038 108.0
DYD1_k127_825150_11 PPIC-type PPIASE domain K03769 - 5.2.1.8 0.000000000000000000000009664 115.0
DYD1_k127_825150_12 snoRNA binding - - - 0.0000000001795 66.0
DYD1_k127_825150_13 PFAM von Willebrand factor type A - - - 0.0000001281 63.0
DYD1_k127_825150_2 pfkB family carbohydrate kinase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006979 349.0
DYD1_k127_825150_3 Enoyl- acyl-carrier-protein reductase NADH K00208 - 1.3.1.10,1.3.1.9 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000562 317.0
DYD1_k127_825150_4 ArgK protein K07588 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001837 314.0
DYD1_k127_825150_5 Possible lysine decarboxylase K06966 - 3.2.2.10 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000002969 284.0
DYD1_k127_825150_6 Metallo-beta-lactamase superfamily - - - 0.0000000000000000000000000000000000000000000000000000000000000000007875 237.0
DYD1_k127_825150_7 metalloendopeptidase activity - - - 0.0000000000000000000000000000000000000000000000000000001072 206.0
DYD1_k127_825150_8 PFAM Glyoxalase bleomycin resistance protein dioxygenase K05606 - 5.1.99.1 0.000000000000000000000000000000000000000003566 158.0
DYD1_k127_825150_9 CutA1 divalent ion tolerance protein K01733,K03926 GO:0003674,GO:0005488,GO:0005507,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0008150,GO:0009987,GO:0010035,GO:0010038,GO:0016043,GO:0022607,GO:0042221,GO:0043167,GO:0043169,GO:0043933,GO:0044085,GO:0044424,GO:0044464,GO:0046688,GO:0046872,GO:0046914,GO:0050896,GO:0051259,GO:0051260,GO:0065003,GO:0071840 4.2.3.1 0.00000000000000000000000002297 112.0
DYD1_k127_851334_0 Amino acid permease K03294 - - 4.536e-200 644.0
DYD1_k127_851334_1 Belongs to the UDP-glucose GDP-mannose dehydrogenase family K13015 - 1.1.1.136 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001165 532.0
DYD1_k127_851334_10 Protein of unknown function (DUF664) - - - 0.000000107 61.0
DYD1_k127_851334_2 DNA polymerase K02335 - 2.7.7.7 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009639 464.0
DYD1_k127_851334_3 Catalyzes the acyloin condensation reaction between C atoms 2 and 3 of pyruvate and glyceraldehyde 3-phosphate to yield 1-deoxy-D-xylulose-5-phosphate (DXP) K01662 - 2.2.1.7 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001386 438.0
DYD1_k127_851334_4 Belongs to the dicarboxylate amino acid cation symporter (DAACS) (TC 2.A.23) family K03309 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001131 389.0
DYD1_k127_851334_5 Major facilitator Superfamily K08223 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003044 383.0
DYD1_k127_851334_6 Rhomboid family - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000002036 295.0
DYD1_k127_851334_7 Involved in the regulation of the intracellular balance of NAD and NADP, and is a key enzyme in the biosynthesis of NADP. Catalyzes specifically the phosphorylation on 2'-hydroxyl of the adenosine moiety of NAD to yield NADP K00858 GO:0000166,GO:0003674,GO:0003824,GO:0003951,GO:0005488,GO:0005524,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006139,GO:0006725,GO:0006732,GO:0006733,GO:0006739,GO:0006741,GO:0006753,GO:0006766,GO:0006767,GO:0006769,GO:0006793,GO:0006796,GO:0006807,GO:0008144,GO:0008150,GO:0008152,GO:0008976,GO:0009058,GO:0009108,GO:0009117,GO:0009165,GO:0009820,GO:0009987,GO:0016301,GO:0016310,GO:0016740,GO:0016772,GO:0016773,GO:0016776,GO:0017076,GO:0017144,GO:0018130,GO:0019359,GO:0019362,GO:0019363,GO:0019438,GO:0019637,GO:0030554,GO:0032553,GO:0032555,GO:0032559,GO:0034641,GO:0034654,GO:0035639,GO:0036094,GO:0043167,GO:0043168,GO:0043603,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0046496,GO:0048037,GO:0050662,GO:0051186,GO:0051188,GO:0051287,GO:0055086,GO:0071704,GO:0072524,GO:0072525,GO:0090407,GO:0097159,GO:0097367,GO:1901265,GO:1901293,GO:1901360,GO:1901362,GO:1901363,GO:1901564,GO:1901566,GO:1901576 2.7.1.23 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000001373 284.0
DYD1_k127_851334_8 FtsJ-like methyltransferase K06442 GO:0000154,GO:0001510,GO:0001897,GO:0001906,GO:0001907,GO:0003674,GO:0003824,GO:0006139,GO:0006364,GO:0006396,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0008168,GO:0008173,GO:0008649,GO:0008757,GO:0009451,GO:0009987,GO:0010467,GO:0016070,GO:0016072,GO:0016740,GO:0016741,GO:0019835,GO:0019836,GO:0022613,GO:0031167,GO:0031640,GO:0032259,GO:0034470,GO:0034641,GO:0034660,GO:0035821,GO:0042254,GO:0043170,GO:0043412,GO:0043414,GO:0044003,GO:0044004,GO:0044085,GO:0044179,GO:0044237,GO:0044238,GO:0044260,GO:0044364,GO:0044403,GO:0044419,GO:0044764,GO:0046483,GO:0051701,GO:0051704,GO:0051715,GO:0051801,GO:0051817,GO:0051818,GO:0051883,GO:0052331,GO:0071704,GO:0071840,GO:0090304,GO:0140098,GO:0140102,GO:1901360 2.1.1.226,2.1.1.227 0.00000000000000000000000000000000000000000000000000000000000000000000000000000009883 273.0
DYD1_k127_851334_9 Catalyzes the NADPH-dependent reduction of 7-cyano-7- deazaguanine (preQ0) to 7-aminomethyl-7-deazaguanine (preQ1) K09457 - 1.7.1.13 0.0000000000000000000000000000000004021 135.0
DYD1_k127_87662_0 Domain of unknown function (DUF3471) K06889 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002978 511.0
DYD1_k127_87662_1 Converts 2-succinyl-6-hydroxy-2,4-cyclohexadiene-1- carboxylate (SHCHC) to 2-succinylbenzoate (OSB) K02549 - 4.2.1.113 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002044 404.0
DYD1_k127_87662_2 Carboxypeptidase regulatory-like domain - - - 0.000000000000000000000000000000000000000000000000000007183 212.0
DYD1_k127_87662_3 SnoaL-like domain - - - 0.000000000000000000000000008275 115.0
DYD1_k127_87662_4 transcriptional regulator, RpiR family - - - 0.000000000000000003172 96.0
DYD1_k127_886656_0 Alpha-2-Macroglobulin K06894 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000005344 302.0
DYD1_k127_886656_1 Protein of unknown function (DUF1175) K09934 - - 0.0000000000000000000000000000000000000000000000000004504 195.0
DYD1_k127_886656_2 Domain of unknown function (DUF4349) - - - 0.0000000000000000000004579 103.0
DYD1_k127_886656_3 Cytochrome c biogenesis protein transmembrane region K04084 - 1.8.1.8 0.000000000000000000005629 100.0
DYD1_k127_886656_4 PFAM von Willebrand factor type A K07114 - - 0.00000000001212 76.0
DYD1_k127_886656_5 - K05826 - - 0.000000002886 62.0
DYD1_k127_886656_6 Carboxypeptidase regulatory-like domain - - - 0.00004217 53.0
DYD1_k127_896847_0 amino acids such as threonine, to avoid such errors, it has a posttransfer editing activity that hydrolyzes mischarged Thr-tRNA(Val) in a tRNA-dependent manner K01873 - 6.1.1.9 1.058e-250 795.0
DYD1_k127_896847_1 Essential cell division protein that forms a contractile ring structure (Z ring) at the future cell division site. The regulation of the ring assembly controls the timing and the location of cell division. One of the functions of the FtsZ ring is to recruit other cell division proteins to the septum to produce a new cell wall between the dividing cells. Binds GTP and shows GTPase activity K03531 GO:0000166,GO:0001882,GO:0001883,GO:0003674,GO:0003824,GO:0003924,GO:0005488,GO:0005525,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0008150,GO:0009987,GO:0016462,GO:0016787,GO:0016817,GO:0016818,GO:0017076,GO:0017111,GO:0019001,GO:0032153,GO:0032549,GO:0032550,GO:0032553,GO:0032555,GO:0032561,GO:0035639,GO:0036094,GO:0043167,GO:0043168,GO:0044424,GO:0044464,GO:0051301,GO:0097159,GO:0097367,GO:1901265,GO:1901363 - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002049 421.0
DYD1_k127_896847_10 Histidine kinase - - - 0.00000000000001396 81.0
DYD1_k127_896847_11 beta-lactamase domain protein K02238 - - 0.000000000000518 72.0
DYD1_k127_896847_13 Cell division protein FtsQ K03589 - - 0.0006045 51.0
DYD1_k127_896847_2 Cell division protein that is involved in the assembly of the Z ring. May serve as a membrane anchor for the Z ring K03590 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001744 391.0
DYD1_k127_896847_3 Belongs to the PdxA family K00097,K22024 - 1.1.1.262,1.1.1.408,1.1.1.409 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000002158 292.0
DYD1_k127_896847_4 Quinolinate phosphoribosyl transferase, C-terminal domain K00767 - 2.4.2.19 0.0000000000000000000000000000000000000000000000000000000000000000000001123 249.0
DYD1_k127_896847_5 amino acids such as threonine, to avoid such errors, it has a posttransfer editing activity that hydrolyzes mischarged Thr-tRNA(Val) in a tRNA-dependent manner K01873 GO:0003674,GO:0003824,GO:0004812,GO:0004832,GO:0005575,GO:0005618,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005886,GO:0006082,GO:0006139,GO:0006399,GO:0006412,GO:0006418,GO:0006438,GO:0006518,GO:0006520,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0016020,GO:0016070,GO:0016874,GO:0016875,GO:0019538,GO:0019752,GO:0030312,GO:0034641,GO:0034645,GO:0034660,GO:0040007,GO:0043038,GO:0043039,GO:0043043,GO:0043170,GO:0043436,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044281,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0071704,GO:0071944,GO:0090304,GO:0140098,GO:0140101,GO:1901360,GO:1901564,GO:1901566,GO:1901576 6.1.1.9 0.00000000000000000000000000000000000000001087 155.0
DYD1_k127_896847_6 response regulator - - - 0.00000000000000000000000000000000000433 150.0
DYD1_k127_896847_7 Hfq protein - - - 0.000000000000000000000004584 106.0
DYD1_k127_896847_8 Domain of unknown function (DUF4440) - - - 0.0000000000000001316 87.0
DYD1_k127_896847_9 methyltransferase - - - 0.000000000000001257 86.0
DYD1_k127_915695_0 PFAM NAD-dependent epimerase dehydratase K08678 - 4.1.1.35 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007562 503.0
DYD1_k127_915695_1 Glycosyl transferases group 1 - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007509 390.0
DYD1_k127_915695_2 carbamoyl transferase, NodU family K00612 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000004724 300.0
DYD1_k127_915695_3 Glycosyl transferase family 4 K02851 - 2.7.8.33,2.7.8.35 0.0000000000000000000000000000000000000000000000000000000003247 222.0
DYD1_k127_915695_4 COG3307 Lipid A core - O-antigen ligase and related enzymes - - - 0.0000003706 59.0
DYD1_k127_916311_0 Belongs to the class-IV pyridoxal-phosphate-dependent aminotransferase family K00826 - 2.6.1.42 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000011 399.0
DYD1_k127_916311_1 PFAM Peptidase M19, renal dipeptidase K01273 - 3.4.13.19 0.000000000000000000000000000000000000000000000000000000000000000005172 237.0
DYD1_k127_918040_0 Amidohydrolase family K01464 - 3.5.2.2 5.187e-201 635.0
DYD1_k127_918040_1 permease for cytosine purines, uracil, thiamine, allantoin K03457 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001357 575.0
DYD1_k127_918040_10 Transposase IS200 like - - - 0.00000000000000000000000009721 108.0
DYD1_k127_918040_11 Transposase K07491 - - 0.00000000000000000000002162 101.0
DYD1_k127_918040_12 Converts alpha-N-acetylneuranimic acid (Neu5Ac) to the beta-anomer, accelerating the equilibrium between the alpha- and beta-anomers. Probably facilitates sialidase-negative bacteria to compete sucessfully for limited amounts of extracellular Neu5Ac, which is likely taken up in the beta-anomer. In addition, the rapid removal of sialic acid from solution might be advantageous to the bacterium to damp down host responses - - - 0.00002316 59.0
DYD1_k127_918040_2 Carbon-nitrogen hydrolase K12251 - 3.5.1.53 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007621 457.0
DYD1_k127_918040_3 Converts 2-succinyl-6-hydroxy-2,4-cyclohexadiene-1- carboxylate (SHCHC) to 2-succinylbenzoate (OSB) K02549 - 4.2.1.113 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007144 451.0
DYD1_k127_918040_4 4Fe-4S dicluster domain K17723 - 1.3.1.1 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000197 440.0
DYD1_k127_918040_5 endonuclease exonuclease phosphatase K07004 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000113 450.0
DYD1_k127_918040_6 Belongs to the aldehyde dehydrogenase family K22187 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001292 323.0
DYD1_k127_918040_7 Exodeoxyribonuclease iii K01142 - 3.1.11.2 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001575 308.0
DYD1_k127_918040_8 peptidase dimerisation domain protein K01295 - 3.4.17.11 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000005381 304.0
DYD1_k127_918217_0 two component, sigma54 specific, transcriptional regulator, Fis family K13599 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003055 522.0
DYD1_k127_918217_1 histidine kinase HAMP region domain protein K13598 - 2.7.13.3 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008713 391.0
DYD1_k127_918217_2 S-adenosyl-l-methionine hydroxide adenosyltransferase K22205 - - 0.00000000000000000000000000000000000000000000000000000000000000009686 230.0
DYD1_k127_918217_3 Radical SAM K22227 - - 0.0000000000000000000000000000000000001759 155.0
DYD1_k127_918217_4 Monogalactosyldiacylglycerol (MGDG) synthase K03429 - 2.4.1.315 0.00000000000000000000000000000000002762 149.0
DYD1_k127_918217_5 CAAX protease self-immunity K07052 - - 0.00000000000000000000000000000003354 138.0
DYD1_k127_918217_6 RNA recognition motif - - - 0.00000000000000000000000000000006002 130.0
DYD1_k127_918217_7 Periplasmic or secreted lipoprotein - - - 0.000000001401 63.0
DYD1_k127_918217_8 Histidine kinase - - - 0.00002366 51.0
DYD1_k127_918217_9 - - - - 0.0002418 49.0
DYD1_k127_920936_0 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009291 454.0
DYD1_k127_920936_1 Type II/IV secretion system protein K02283 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000002217 289.0
DYD1_k127_920936_10 Flp pilus assembly protein, ATPase CpaE K02282 - - 0.00000000005532 68.0
DYD1_k127_920936_11 Flp Fap pilin component K02651 - - 0.00003087 48.0
DYD1_k127_920936_12 Flp Fap pilin component K02651 - - 0.0002035 46.0
DYD1_k127_920936_2 Bacterial regulatory protein, Fis family - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000003844 294.0
DYD1_k127_920936_3 Belongs to the GSP D family K02280 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000002205 284.0
DYD1_k127_920936_4 Flp pilus assembly protein RcpC/CpaB K02279 - - 0.00000000000000000000000000000000000000000000000000000001061 210.0
DYD1_k127_920936_5 NUBPL iron-transfer P-loop NTPase K02282 - - 0.0000000000000000000000000000000000001046 150.0
DYD1_k127_920936_6 Putative Flp pilus-assembly TadE/G-like - - - 0.0000000000000000000000000002425 128.0
DYD1_k127_920936_7 TadE-like protein - - - 0.0000000000000000000025 100.0
DYD1_k127_920936_8 Type IV leader peptidase family K02278 - 3.4.23.43 0.0000000000000001126 87.0
DYD1_k127_920936_9 TadE-like protein - - - 0.00000000000716 72.0
DYD1_k127_92103_0 gluconolactonase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001046 324.0
DYD1_k127_92103_1 Pyridine nucleotide-disulphide oxidoreductase K00384 - 1.8.1.9 0.00000000000000000000000000000000000000000000000007293 189.0
DYD1_k127_92103_2 - - - - 0.0000000000000000000000000000005835 135.0
DYD1_k127_92103_3 ThiS family K21029,K21147 - 2.7.7.80,2.8.1.11 0.000000000000000000000000000002156 123.0
DYD1_k127_92103_4 Glycine/sarcosine/betaine reductase selenoprotein B (GRDB) K10794 - 1.21.4.1 0.0000000000000000000001098 108.0
DYD1_k127_943762_0 Belongs to the lyase 1 family. Adenylosuccinate lyase subfamily K01756 - 4.3.2.2 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002851 538.0
DYD1_k127_943762_1 Part of the phosphoribosylformylglycinamidine synthase complex involved in the purines biosynthetic pathway. Catalyzes the ATP-dependent conversion of formylglycinamide ribonucleotide (FGAR) and glutamine to yield formylglycinamidine ribonucleotide (FGAM) and glutamate. The FGAM synthase complex is composed of three subunits. PurQ produces an ammonia molecule by converting glutamine to glutamate. PurL transfers the ammonia molecule to FGAR to form FGAM in an ATP-dependent manner. PurS interacts with PurQ and PurL and is thought to assist in the transfer of the ammonia molecule from PurQ to PurL K01952 - 6.3.5.3 0.0000000000000000000002196 99.0
DYD1_k127_943762_2 Domain of unknown function (DUF4870) - - - 0.000000000000000000001502 99.0
DYD1_k127_943762_3 Part of the phosphoribosylformylglycinamidine synthase complex involved in the purines biosynthetic pathway. Catalyzes the ATP-dependent conversion of formylglycinamide ribonucleotide (FGAR) and glutamine to yield formylglycinamidine ribonucleotide (FGAM) and glutamate. The FGAM synthase complex is composed of three subunits. PurQ produces an ammonia molecule by converting glutamine to glutamate. PurL transfers the ammonia molecule to FGAR to form FGAM in an ATP-dependent manner. PurS interacts with PurQ and PurL and is thought to assist in the transfer of the ammonia molecule from PurQ to PurL K01952 - 6.3.5.3 0.00000007376 56.0
DYD1_k127_943762_4 Metallo-beta-lactamase superfamily - - - 0.0000001749 55.0
DYD1_k127_948806_0 PFAM Alcohol dehydrogenase zinc-binding domain protein K00344 - 1.6.5.5 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001209 414.0
DYD1_k127_948806_1 Glycosyl hydrolase family 9 K01179 - 3.2.1.4 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002061 370.0
DYD1_k127_948806_2 FAD binding domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000007235 262.0
DYD1_k127_950875_0 Cyclomaltodextrinase, N-terminal K21575 - 3.2.1.135 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002396 587.0
DYD1_k127_950875_1 MFS/sugar transport protein K16211 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002291 535.0
DYD1_k127_950875_2 Glycogen debranching enzyme, glucanotransferase domain - - - 0.00000000000000000000000000000000000000000000000000000000000000001524 229.0
DYD1_k127_950875_3 4-alpha-glucanotransferase K00705 - 2.4.1.25 0.0000000000000000000000000000000001163 153.0
DYD1_k127_952090_0 peptidase S8 and S53, subtilisin, kexin, sedolisin K20754 - 3.4.21.111 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007718 374.0
DYD1_k127_952090_1 aminopeptidase activity - - - 0.0000000000000000000000000000000000000000000000000000000003628 213.0
DYD1_k127_956811_0 Sugar (and other) transporter - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008708 419.0
DYD1_k127_956811_1 Ferritin-like domain K04047 - - 0.00000000000000000000000000000000001526 141.0
DYD1_k127_987581_0 Allows the formation of correctly charged Gln-tRNA(Gln) through the transamidation of misacylated Glu-tRNA(Gln) in organisms which lack glutaminyl-tRNA synthetase. The reaction takes place in the presence of glutamine and ATP through an activated gamma-phospho-Glu-tRNA(Gln) K02433 - 6.3.5.6,6.3.5.7 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001504 535.0
DYD1_k127_987581_1 Bacterial extracellular solute-binding protein K02012 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001146 336.0
DYD1_k127_987581_2 Part of the ABC transporter complex PotABCD involved in spermidine putrescine import. Responsible for energy coupling to the transport system K02010,K11072 - 3.6.3.30,3.6.3.31 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000001074 307.0
DYD1_k127_987581_3 Binding-protein-dependent transport system inner membrane component K02011 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000003294 267.0
DYD1_k127_987581_4 septum formation protein Maf K06287 GO:0000278,GO:0000281,GO:0000910,GO:0000917,GO:0005575,GO:0005623,GO:0007049,GO:0008150,GO:0009987,GO:0016043,GO:0022402,GO:0022607,GO:0030428,GO:0032506,GO:0044085,GO:0044464,GO:0051301,GO:0061640,GO:0071840,GO:0090529,GO:1902410,GO:1903047 - 0.0000000000000000000000000000000000000000000002676 174.0
DYD1_k127_987581_5 Allows the formation of correctly charged Asn-tRNA(Asn) or Gln-tRNA(Gln) through the transamidation of misacylated Asp- tRNA(Asn) or Glu-tRNA(Gln) in organisms which lack either or both of asparaginyl-tRNA or glutaminyl-tRNA synthetases. The reaction takes place in the presence of glutamine and ATP through an activated phospho-Asp-tRNA(Asn) or phospho-Glu-tRNA(Gln) K02435 - 6.3.5.6,6.3.5.7 0.000000000006527 69.0
DYD1_k127_987581_6 ABC transporter K01990 - - 0.00000000002067 66.0
DYD1_k127_987581_7 Protein of unknown function (DUF721) - - - 0.0002032 50.0
DYD1_k127_988683_0 Belongs to the heme-copper respiratory oxidase family K02274 - 1.9.3.1 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000213 538.0
DYD1_k127_988683_1 Converts heme B (protoheme IX) to heme O by substitution of the vinyl group on carbon 2 of heme B porphyrin ring with a hydroxyethyl farnesyl side group K02257 - 2.5.1.141 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003664 306.0
DYD1_k127_988683_2 PFAM cytochrome c oxidase subunit II K02275 - 1.9.3.1 0.0000000000000000000000000000000000000000000000000000000000000000000000003768 255.0
DYD1_k127_988683_3 heme a metabolic process K02259,K03110 - - 0.00000000000000000000000000000000000184 150.0
DYD1_k127_988683_4 Polysaccharide lyase family 4, domain II - - - 0.00000000000000000000000000000000008088 138.0
DYD1_k127_989581_0 Tricorn protease C1 domain K08676 - - 0.0 1328.0
DYD1_k127_989581_1 peptidase dimerisation domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005689 544.0
DYD1_k127_989581_2 Belongs to the peptidase S41A family K03797 - 3.4.21.102 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004817 320.0
DYD1_k127_989581_3 Tetratricopeptide repeat - - - 0.000000000000000000000000000000000000000000000001588 196.0
DYD1_k127_989581_4 acetyltransferase - - - 0.000000000000000000000000000000000000000000002376 168.0
DYD1_k127_989581_5 PFAM Diacylglycerol kinase catalytic domain - - - 0.0000000000000000000000000000000000000005674 160.0
DYD1_k127_989581_6 Ferredoxins are iron-sulfur proteins that transfer electrons in a wide variety of metabolic reactions K05524 - - 0.0000000000000000000000000000002582 125.0
DYD1_k127_989581_7 Ribose/Galactose Isomerase K01808 - 5.3.1.6 0.0000000000000003992 79.0