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Overview

ID MAG00857
Name DYD1_bin.37
Sample SMP0025
Taxonomy
Kingdom Bacteria
Phylum Planctomycetota
Class Phycisphaerae
Order UBA1845
Family UTPLA1
Genus JAKSDK01
Species
Assembly information
Completeness (%) 76.47
Contamination (%) 1.33
GC content (%) 61.0
N50 (bp) 5,561
Genome size (bp) 2,812,022

Location

Module

Module ID Module name Total genes Total steps Contain genes Contain steps Percentage of genes Percentage of steps

Genes2164

Gene name Description KEGG GOs EC E-value Score Sequence
DYD1_k127_1013154_0 Type I phosphodiesterase / nucleotide pyrophosphatase - - - 1.889e-251 799.0
DYD1_k127_1013154_1 Antioxidant protein with alkyl hydroperoxidase activity. Required for the reduction of the AhpC active site cysteine residues and for the regeneration of the AhpC enzyme activity K01607 - 4.1.1.44 0.000000000000000000000000000000000000000000001083 167.0
DYD1_k127_1015334_0 NAD-binding protein involved in the addition of a carboxymethylaminomethyl (cmnm) group at the wobble position (U34) of certain tRNAs, forming tRNA-cmnm(5)s(2)U34 K03495 GO:0000166,GO:0001510,GO:0002097,GO:0002098,GO:0003674,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006139,GO:0006396,GO:0006399,GO:0006400,GO:0006725,GO:0006807,GO:0008033,GO:0008150,GO:0008152,GO:0009451,GO:0009987,GO:0010467,GO:0016070,GO:0030488,GO:0032259,GO:0034470,GO:0034641,GO:0034660,GO:0036094,GO:0043167,GO:0043168,GO:0043170,GO:0043412,GO:0043414,GO:0044237,GO:0044238,GO:0044260,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0048037,GO:0050660,GO:0050662,GO:0071704,GO:0090304,GO:0097159,GO:1901265,GO:1901360,GO:1901363 - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008081 535.0
DYD1_k127_1015334_1 Is required not only for elongation of protein synthesis but also for the initiation of all mRNA translation through initiator tRNA(fMet) aminoacylation K01874 GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006082,GO:0006139,GO:0006399,GO:0006412,GO:0006418,GO:0006518,GO:0006520,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0016070,GO:0019538,GO:0019752,GO:0034641,GO:0034645,GO:0034660,GO:0043038,GO:0043039,GO:0043043,GO:0043170,GO:0043436,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044281,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0071704,GO:0090304,GO:1901360,GO:1901564,GO:1901566,GO:1901576 6.1.1.10 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001968 498.0
DYD1_k127_1015334_2 homoserine dehydrogenase K00003 - 1.1.1.3 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008008 380.0
DYD1_k127_1015334_3 Serine aminopeptidase, S33 - - - 0.0000000000004144 71.0
DYD1_k127_1016691_0 oligosaccharyl transferase activity - - - 0.0000000000000000000000000000000000000000000000000000000000186 222.0
DYD1_k127_1016691_1 DoxX K15977 - - 0.0000000000000000000000000000000000008977 143.0
DYD1_k127_1017893_0 DNA primase activity K02316 GO:0003674,GO:0003824,GO:0003896,GO:0003899,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006139,GO:0006259,GO:0006260,GO:0006261,GO:0006269,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0008270,GO:0009058,GO:0009059,GO:0009987,GO:0016070,GO:0016740,GO:0016772,GO:0016779,GO:0018130,GO:0019438,GO:0032774,GO:0034062,GO:0034641,GO:0034645,GO:0034654,GO:0043167,GO:0043169,GO:0043170,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044271,GO:0044424,GO:0044464,GO:0046483,GO:0046872,GO:0046914,GO:0071704,GO:0090304,GO:0097747,GO:0140098,GO:1901360,GO:1901362,GO:1901576 - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003828 326.0
DYD1_k127_1017893_1 Belongs to the GSP D family K02453 - - 0.00000000000000000000000006864 125.0
DYD1_k127_1030558_0 Protein of unknown function (DUF1501) - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000276 286.0
DYD1_k127_1030558_1 PDZ domain (Also known as DHR or GLGF) - - - 0.0000000000000000000000165 103.0
DYD1_k127_1030558_2 - - - - 0.0000000000000000000001176 101.0
DYD1_k127_1030558_3 Putative addiction module component - - - 0.00000000000000002529 83.0
DYD1_k127_1033418_0 4Fe-4S dicluster domain K00184 - - 1.644e-197 642.0
DYD1_k127_1033418_1 Belongs to the peptidase M50B family - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003961 436.0
DYD1_k127_1033418_2 COG0745 Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain K02483 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000001891 268.0
DYD1_k127_1033418_3 Cytochrome c7 and related cytochrome c - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000003355 261.0
DYD1_k127_1033418_4 Protein conserved in bacteria - - - 0.000000000000000000000000000000000000000000000000000000000000000000106 239.0
DYD1_k127_1033418_5 Histidine kinase K07644 - 2.7.13.3 0.00000000000000000000000000000000000000000001688 179.0
DYD1_k127_1033418_6 TIGRFAM sugar-phosphate isomerases, RpiB LacA LacB family K01808 - 5.3.1.6 0.000000000000000000000000000000000000000002385 158.0
DYD1_k127_1033418_7 - - - - 0.000000000000000000000000000000002875 133.0
DYD1_k127_1049414_0 Belongs to the class-IV pyridoxal-phosphate-dependent aminotransferase family K00826 - 2.6.1.42 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003364 431.0
DYD1_k127_1049414_1 Protein tyrosine kinase K12132 - 2.7.11.1 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001288 441.0
DYD1_k127_1049414_2 transferase activity, transferring glycosyl groups K08604,K20276 - 3.4.24.25 0.00000000000000001265 98.0
DYD1_k127_1049414_3 cellulase activity - - - 0.00000000000002884 87.0
DYD1_k127_1049414_4 COG1595 DNA-directed RNA polymerase specialized sigma K03088 - - 0.00001179 55.0
DYD1_k127_1055285_0 Endonuclease that is involved in the suppression of homologous recombination and may therefore have a key role in the control of bacterial genetic diversity K07456 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003016 422.0
DYD1_k127_1055285_1 AAA domain (Cdc48 subfamily) - - - 0.000000000000000000000000000000000000000000000000000001025 199.0
DYD1_k127_1055285_2 Prokaryotic N-terminal methylation motif - - - 0.00000000000000000000000001207 123.0
DYD1_k127_1063297_0 AMP-binding enzyme C-terminal domain K18660 - - 0.000000000000000000000000000000000000000000000000000000000000000000001229 239.0
DYD1_k127_1063297_1 Pfam:N_methyl_2 K02456 - - 0.000000000000000000000001849 109.0
DYD1_k127_1065719_0 Peptidase family S49 K04773 - - 0.00000000000000000000000000000000000000000000000000139 199.0
DYD1_k127_1065719_1 domain, Protein - - - 0.000000000000000000001599 100.0
DYD1_k127_1065719_2 domain protein - - - 0.0000000000000001291 92.0
DYD1_k127_1079107_0 Pyruvate ferredoxin oxidoreductase and related K00174 - 1.2.7.11,1.2.7.3 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007059 590.0
DYD1_k127_1079107_1 COG1013 Pyruvate ferredoxin oxidoreductase and related 2-oxoacid ferredoxin K00175 - 1.2.7.11,1.2.7.3 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007351 509.0
DYD1_k127_1079107_2 Belongs to the DegT DnrJ EryC1 family - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001155 442.0
DYD1_k127_1079107_3 Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain K01491 GO:0003674,GO:0003824,GO:0004477,GO:0004488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006730,GO:0008150,GO:0008152,GO:0009987,GO:0016491,GO:0016645,GO:0016646,GO:0016787,GO:0016810,GO:0016814,GO:0019238,GO:0044237,GO:0044281,GO:0044424,GO:0044444,GO:0044464,GO:0055114 1.5.1.5,3.5.4.9 0.000000000000000000000000000000000000000000000000000000000000000002181 238.0
DYD1_k127_1079107_4 Xylose isomerase-like TIM barrel - - - 0.000000000000000000000000000000000000001013 160.0
DYD1_k127_1079107_5 UDP-phosphate N-acetylglucosaminyl 1-phosphate transferase K02851 - 2.7.8.33,2.7.8.35 0.000000000000000000000000000000000001079 154.0
DYD1_k127_1079107_6 COG0811 Biopolymer transport K03561 - - 0.00000000000000000000000000001042 129.0
DYD1_k127_1079107_7 von Willebrand factor (vWF) type A domain - - - 0.0000000000000001721 91.0
DYD1_k127_1079107_8 Protein of unknown function (DUF1570) - - - 0.00008325 55.0
DYD1_k127_1090417_0 E1-E2 ATPase K17686 GO:0003674,GO:0005488,GO:0005515,GO:0005575,GO:0005623,GO:0005886,GO:0016020,GO:0042802,GO:0044464,GO:0071944 3.6.3.54 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003015 454.0
DYD1_k127_1090417_1 PFAM ATPase family associated with various cellular activities (AAA) K03924 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005629 362.0
DYD1_k127_1090417_10 - - - - 0.00000000000000000002359 103.0
DYD1_k127_1090417_11 - - - - 0.000000000000000001301 88.0
DYD1_k127_1090417_12 Histidine kinase - - - 0.000000000000007931 88.0
DYD1_k127_1090417_13 YjzC-like protein - - - 0.000000002085 61.0
DYD1_k127_1090417_14 - - - - 0.00000005463 62.0
DYD1_k127_1090417_15 COG0745 Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain K07664 - - 0.000004795 54.0
DYD1_k127_1090417_2 Catalyzes the reversible reaction in which hydroxymethyl group from 5,10-methylenetetrahydrofolate is transferred onto alpha-ketoisovalerate to form ketopantoate K00606 - 2.1.2.11 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000009477 297.0
DYD1_k127_1090417_3 Catalyzes the transfer of the phosphoribosyl group of 5- phosphorylribose-1-pyrophosphate (PRPP) to anthranilate to yield N-(5'-phosphoribosyl)-anthranilate (PRA) K00766 - 2.4.2.18 0.000000000000000000000000000000000000000000000000000000000000000000000000000000001259 286.0
DYD1_k127_1090417_4 riboflavin biosynthesis protein K11753 - 2.7.1.26,2.7.7.2 0.0000000000000000000000000000000000000000000000000000000000000001289 232.0
DYD1_k127_1090417_5 DHHA1 domain K06881 - 3.1.13.3,3.1.3.7 0.00000000000000000000000000000000000000000000000003485 192.0
DYD1_k127_1090417_6 Domain of unknown function (DUF3488) - - - 0.00000000000000000000000000000000000000000000002286 194.0
DYD1_k127_1090417_7 Transglutaminase-like superfamily - - - 0.00000000000000000000000000000000000000000000004175 188.0
DYD1_k127_1090417_8 Inosine-uridine preferring nucleoside hydrolase K01250,K12700 - - 0.0000000000000000000000000000002346 135.0
DYD1_k127_1090417_9 protein (some members contain a von Willebrand factor type A (vWA) domain) - - - 0.00000000000000000000003069 115.0
DYD1_k127_1098164_0 Cytochrome C oxidase, cbb3-type, subunit III - - - 6.932e-197 624.0
DYD1_k127_1098164_1 Involved in the biosynthesis of the chorismate, which leads to the biosynthesis of aromatic amino acids. Catalyzes the reversible NADPH linked reduction of 3-dehydroshikimate (DHSA) to yield shikimate (SA) K13832 - 1.1.1.25,4.2.1.10 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004409 367.0
DYD1_k127_1098164_2 Calcineurin-like phosphoesterase superfamily domain K07096 - - 0.0000000000000000000005874 104.0
DYD1_k127_1099623_0 UDP-N-acetyl-D-glucosamine 2-epimerase, UDP-hydrolysing K01791,K18429 - 3.2.1.184,5.1.3.14 0.000000000000000000000000000000000000000000000000001412 190.0
DYD1_k127_1099623_1 - - - - 0.00000004095 58.0
DYD1_k127_1101827_0 spore germination - - - 0.0000000000000000000000000000000000000000000000000000000000000003966 230.0
DYD1_k127_1101827_1 hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds - - - 0.0000000000000000000000000000000003366 147.0
DYD1_k127_1101827_2 ATP binding to DnaK triggers the release of the substrate protein, thus completing the reaction cycle. Several rounds of ATP-dependent interactions between DnaJ, DnaK and GrpE are required for fully efficient folding. Also involved, together with DnaK and GrpE, in the DNA replication of plasmids through activation of initiation proteins K03686 - - 0.00000000000000000000134 94.0
DYD1_k127_1104202_0 B12 binding domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000245 308.0
DYD1_k127_1104202_1 PPIC-type PPIASE domain K03769 - 5.2.1.8 0.000000000000000000000000000000000000000000001071 179.0
DYD1_k127_1104202_2 M6 family metalloprotease domain protein - - - 0.00000000000000000000000001568 124.0
DYD1_k127_1104202_3 Molybdenum cofactor synthesis domain protein K03750 - 2.10.1.1 0.00000000000000009103 85.0
DYD1_k127_1128433_0 Belongs to the peptidase M24B family - - - 0.0000000000000000000000000000000000000000000000000000000000000000001994 245.0
DYD1_k127_1128433_1 COG0402 Cytosine deaminase and related metal-dependent K20810 - 3.5.4.40 0.00000000000000000000000000000000000000000000000000002704 203.0
DYD1_k127_1128433_2 diguanylate cyclase activity K13069 GO:0003674,GO:0003824,GO:0016740,GO:0016772,GO:0016779,GO:0052621 2.7.7.65 0.00000000000000000000000000000000000000001763 169.0
DYD1_k127_1128433_3 O-Methyltransferase - - - 0.00000000000000000000000000000000000000005842 161.0
DYD1_k127_1128433_4 D-Ala-D-Ala carboxypeptidase 3 (S13) family K07259 - 3.4.16.4 0.000000000000000000000000000000000000003641 158.0
DYD1_k127_1128433_5 Universal bacterial protein YeaZ K14742 - - 0.00000000000000000000000000002171 126.0
DYD1_k127_1128433_6 D-Ala-D-Ala carboxypeptidase 3 (S13) family K07259 - 3.4.16.4 0.000000000000000000002006 107.0
DYD1_k127_1128433_7 Domain of unknown function (DUF1844) - - - 0.00000000000001613 83.0
DYD1_k127_1128433_8 Lipopolysaccharide kinase (Kdo/WaaP) family - - - 0.00000008049 58.0
DYD1_k127_1128433_9 STAS domain - - - 0.000001929 56.0
DYD1_k127_1150977_0 Involved in the gluconeogenesis. Catalyzes the conversion of oxaloacetate (OAA) to phosphoenolpyruvate (PEP) through direct phosphoryl transfer between the nucleoside triphosphate and OAA K01610 - 4.1.1.49 2.546e-207 658.0
DYD1_k127_1150977_1 peptidyl-serine autophosphorylation - - - 0.000000000000000000000000000000000000000000000000000001803 204.0
DYD1_k127_1150977_2 Catalyzes the reversible adenylation of nicotinate mononucleotide (NaMN) to nicotinic acid adenine dinucleotide (NaAD) K00969 - 2.7.7.18 0.000000000000000000000000000000000000000000000002326 180.0
DYD1_k127_1150977_3 amine dehydrogenase activity - - - 0.000000000000000000000003751 115.0
DYD1_k127_1150977_4 CHRD domain - - - 0.00000000000000399 85.0
DYD1_k127_1150977_5 Transfers the fatty acyl group on membrane lipoproteins K03820 GO:0000030,GO:0003674,GO:0003824,GO:0004582,GO:0005575,GO:0005618,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005886,GO:0006629,GO:0006643,GO:0006664,GO:0008150,GO:0008152,GO:0008610,GO:0009058,GO:0009247,GO:0009605,GO:0009607,GO:0009987,GO:0016020,GO:0016740,GO:0016757,GO:0016758,GO:0030312,GO:0035821,GO:0043207,GO:0044003,GO:0044237,GO:0044238,GO:0044249,GO:0044255,GO:0044403,GO:0044419,GO:0044424,GO:0044444,GO:0044464,GO:0046467,GO:0050896,GO:0051701,GO:0051704,GO:0051707,GO:0051817,GO:0052031,GO:0052173,GO:0052200,GO:0052255,GO:0052552,GO:0052553,GO:0052564,GO:0052572,GO:0070085,GO:0071704,GO:0071944,GO:0075136,GO:0097502,GO:1901135,GO:1901137,GO:1901576,GO:1903509 - 0.0000606 52.0
DYD1_k127_115783_0 Protein conserved in bacteria - - - 0.000000000000000000000000000000000000000000000000007069 199.0
DYD1_k127_115783_1 Cupin 2, conserved barrel domain protein - - - 0.0000000000000000000000000000006359 125.0
DYD1_k127_115783_2 Cytochrome c554 and c-prime - - - 0.0000000000000000000000000006682 120.0
DYD1_k127_115783_3 deoxyhypusine monooxygenase activity - - - 0.000000000000000197 87.0
DYD1_k127_1176467_0 Sigma-70 region 2 K03088 - - 0.00000000000000000000000003777 115.0
DYD1_k127_1176467_1 helix_turn_helix, Lux Regulon - - - 0.000000000000000001578 96.0
DYD1_k127_1182701_0 metallocarboxypeptidase activity - - - 0.000000000000000000000000000000000000000000000000000000000000000000007241 252.0
DYD1_k127_1182701_1 Succinate dehydrogenase/Fumarate reductase transmembrane subunit K00241 - - 0.0000000000000000000000000000000000000000000000001101 186.0
DYD1_k127_1182701_2 Putative restriction endonuclease - - - 0.0000000000000000000000000000006644 128.0
DYD1_k127_1198901_0 protein kinase activity - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002353 548.0
DYD1_k127_1198901_1 COG1595 DNA-directed RNA polymerase specialized sigma subunit sigma24 homolog - - - 0.000000000000000000000000000000000000000000000002712 180.0
DYD1_k127_1198901_2 PFAM 3-Oxoacyl- acyl-carrier-protein (ACP) synthase III C terminal K00648 - 2.3.1.180 0.0000000007718 63.0
DYD1_k127_1198901_3 lipolytic protein G-D-S-L family K18650 - 3.2.1.82 0.0004643 49.0
DYD1_k127_1213897_0 PFAM BioY protein K03523 - - 0.0000000000000000000000000000000001527 139.0
DYD1_k127_1213897_1 ABC transporter, phosphonate, periplasmic substrate-binding protein K02044 - - 0.00000006604 64.0
DYD1_k127_1213897_2 basal body rod K02392 - - 0.0000002377 54.0
DYD1_k127_1213897_3 Cro/C1-type HTH DNA-binding domain - - - 0.0000292 51.0
DYD1_k127_1216673_0 May play a key role in the regulation of the intracellular concentration of adenosylhomocysteine K01251 - 3.3.1.1 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007212 518.0
DYD1_k127_1216673_1 Histidine kinase K02482,K14986 - 2.7.13.3 0.0000000000000000000000000000000000000000000000000000000000000000002604 252.0
DYD1_k127_1216673_2 helix_turn_helix, Lux Regulon - - - 0.000000000000000000000000000000000000000000000000000000000002129 217.0
DYD1_k127_1216673_3 Methyltransferase type 11 K03892 - - 0.0000000000000000000000000000000000000000000000000000004157 205.0
DYD1_k127_1223793_0 general secretion pathway protein D K02453 - - 0.00000000000002525 89.0
DYD1_k127_1223793_1 General Secretion Pathway protein K02453 - - 0.00005129 58.0
DYD1_k127_122466_0 Bacterial extracellular solute-binding proteins, family 5 Middle K12368 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000143 443.0
DYD1_k127_122466_1 Catalyzes a trans-dehydration via an enolate intermediate K03786 - 4.2.1.10 0.000000000000000001947 88.0
DYD1_k127_1232679_0 ABC transporter K02003 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000003349 266.0
DYD1_k127_1232679_1 membrane, and an ATP-binding domain (NBD), which is responsible for energy generation. Confers resistance against macrolides K02004 - - 0.00000000000000000000000000000000000000000002607 182.0
DYD1_k127_1232679_2 Barrel-sandwich domain of CusB or HlyD membrane-fusion K02005 - - 0.0000000000000000000000000000000000001286 155.0
DYD1_k127_1238637_0 flagellar hook-associated protein 2 K02407 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000003362 286.0
DYD1_k127_1238637_1 flagellar protein FliS K02422 - - 0.000000000000000000000008088 107.0
DYD1_k127_1238637_2 PFAM Tetratricopeptide repeat - - - 0.000001722 59.0
DYD1_k127_1249762_0 Component of the pyruvate dehydrogenase (PDH) complex, that catalyzes the overall conversion of pyruvate to acetyl-CoA and CO(2) K00163 - 1.2.4.1 2.281e-311 966.0
DYD1_k127_1249762_1 PFAM Glycosyl transferase family 2 - - - 0.000000000000000000000000000000000000000000000008634 188.0
DYD1_k127_1249762_2 Dolichyl-phosphate-mannose-protein mannosyltransferase - - - 0.0006485 52.0
DYD1_k127_125347_0 Protein tyrosine kinase K12132 - 2.7.11.1 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001586 499.0
DYD1_k127_125347_1 ECF sigma factor - - - 0.00000000000000000000000000000000000000000000000003903 184.0
DYD1_k127_1261789_0 PFAM type I phosphodiesterase nucleotide pyrophosphatase - - - 0.00000000000000000000000000000000000000000000000001707 193.0
DYD1_k127_1261789_1 CoA-binding protein K06929 - - 0.000000000000000000000000000000000000000000001247 167.0
DYD1_k127_1261789_2 Vault protein inter-alpha-trypsin domain K07114 - - 0.000000002753 65.0
DYD1_k127_1265834_0 Belongs to the CinA family K03742 - 3.5.1.42 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000003215 309.0
DYD1_k127_1272046_0 Involved in the biosynthesis of porphyrin-containing compound - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000007033 297.0
DYD1_k127_1272046_1 Major facilitator superfamily - - - 0.00000000000000000000000000000000003617 140.0
DYD1_k127_1272046_2 Universal stress protein - - - 0.00000000000000000000000000355 123.0
DYD1_k127_1272046_3 Protein of unknown function (DUF2662) - GO:0003674,GO:0003676,GO:0003723,GO:0003729,GO:0005488,GO:0005575,GO:0005618,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0030312,GO:0044424,GO:0044444,GO:0044464,GO:0071944,GO:0097159,GO:1901363 - 0.00000000000892 73.0
DYD1_k127_1277760_0 Belongs to the ClpA ClpB family K03695,K03696 - - 3.141e-304 952.0
DYD1_k127_1278426_0 Catalyzes two steps in the biosynthesis of coenzyme A. In the first step cysteine is conjugated to 4'-phosphopantothenate to form 4-phosphopantothenoylcysteine, in the latter compound is decarboxylated to form 4'-phosphopantotheine K01598,K13038 - 4.1.1.36,6.3.2.5 0.0000000000000000000000000000000000000000000000006907 183.0
DYD1_k127_1278426_1 Essential for recycling GMP and indirectly, cGMP K00942 - 2.7.4.8 0.000000000000000000000000000000000000000000001237 173.0
DYD1_k127_1278426_2 stress-induced protein - - - 0.000000000000000006295 84.0
DYD1_k127_1278426_3 Promotes RNA polymerase assembly. Latches the N- and C- terminal regions of the beta' subunit thereby facilitating its interaction with the beta and alpha subunits K03060 - 2.7.7.6 0.0000000000003078 74.0
DYD1_k127_1287069_0 This protein promotes the GTP-dependent binding of aminoacyl-tRNA to the A-site of ribosomes during protein biosynthesis K02358 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001468 607.0
DYD1_k127_1287069_1 ATPase, P-type (transporting), HAD superfamily, subfamily IC K01534,K17686 - 3.6.3.3,3.6.3.5,3.6.3.54 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007311 508.0
DYD1_k127_1287069_2 Participates in transcription elongation, termination and antitermination K02601 - - 0.0000000000000000000000000000000000000000000000000000000000003632 221.0
DYD1_k127_1287069_3 Forms part of the ribosomal stalk which helps the ribosome interact with GTP-bound translation factors K02867 GO:0000027,GO:0003674,GO:0003676,GO:0003723,GO:0003735,GO:0005198,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0006412,GO:0006518,GO:0006807,GO:0006996,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0015934,GO:0016043,GO:0019538,GO:0019843,GO:0022607,GO:0022613,GO:0022618,GO:0022625,GO:0022626,GO:0032991,GO:0034622,GO:0034641,GO:0034645,GO:0042254,GO:0042255,GO:0042273,GO:0043043,GO:0043170,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043603,GO:0043604,GO:0043933,GO:0044085,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:0065003,GO:0070925,GO:0071704,GO:0071826,GO:0071840,GO:0097159,GO:1901363,GO:1901564,GO:1901566,GO:1901576,GO:1990904 - 0.00000000000000000000000000000000000000000000007238 175.0
DYD1_k127_1287069_4 stress-induced mitochondrial fusion - - - 0.00000000000000000000000000546 123.0
DYD1_k127_1287069_5 4-amino-4-deoxy-L-arabinose transferase activity K14340 - - 0.0000000000000000000007634 111.0
DYD1_k127_1287069_6 Essential subunit of the Sec protein translocation channel SecYEG. Clamps together the 2 halves of SecY. May contact the channel plug during translocation K03073 - - 0.00000000000000000005237 97.0
DYD1_k127_1287069_7 Belongs to the bacterial ribosomal protein bL33 family K02913 - - 0.0000000000000005499 79.0
DYD1_k127_1287069_8 ABC-type transport system involved in multi-copper enzyme maturation permease component - - - 0.00000000000001065 86.0
DYD1_k127_1290280_0 PFAM NAD-dependent glycerol-3-phosphate dehydrogenase K00057 - 1.1.1.94 0.000000000000000000000000000000000000000000000000000000000000001459 227.0
DYD1_k127_1290280_1 haloacid dehalogenase superfamily, subfamily IA, variant 3 with third motif having DD or ED - - - 0.00000000000000000000000000000000000000000006077 169.0
DYD1_k127_1290280_2 4-amino-4-deoxy-L-arabinose transferase and related glycosyltransferases of PMT family - - - 0.000000000000000000000000000000002375 146.0
DYD1_k127_1290280_3 Participates in chromosomal partition during cell division. May act via the formation of a condensin-like complex containing Smc and ScpA that pull DNA away from mid-cell into both cell halves K06024 - - 0.0000000000000000000000000000008066 128.0
DYD1_k127_1294346_0 Rdx family K07401 - - 0.00000000000172 68.0
DYD1_k127_1300173_0 Belongs to the purine pyrimidine phosphoribosyltransferase family K00760 - 2.4.2.8 0.000000000000000000000000000000000000000000003057 169.0
DYD1_k127_1300173_1 SNARE associated Golgi protein - - - 0.0000000000000000000000000000000000000000005035 167.0
DYD1_k127_1300173_2 Response regulator containing a CheY-like receiver domain and a GGDEF domain - - - 0.0000000000000000000000000000002188 136.0
DYD1_k127_1301843_0 FAD dependent oxidoreductase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006095 329.0
DYD1_k127_1301843_1 Aldo/keto reductase family - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000004481 293.0
DYD1_k127_1301843_2 Transfers the gamma-phosphate of ATP to the 4'-position of a tetraacyldisaccharide 1-phosphate intermediate (termed DS-1- P) to form tetraacyldisaccharide 1,4'-bis-phosphate (lipid IVA) K00912 - 2.7.1.130 0.000000000000000000000000000000000000000000000000000000000003221 223.0
DYD1_k127_1334309_0 Asparagine synthase, glutamine-hydrolyzing K01953 - 6.3.5.4 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002431 533.0
DYD1_k127_1334309_1 Catalyzes the activation of phenylacetic acid (PA) to phenylacetyl-CoA (PA-CoA) K01912 - 6.2.1.30 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004665 374.0
DYD1_k127_1334309_2 Diguanylate cyclase, GGDEF domain - - - 0.0000000000000000000000005754 120.0
DYD1_k127_1334309_3 tetR family - - - 0.0000000000005595 78.0
DYD1_k127_1334309_4 Serine aminopeptidase, S33 - - - 0.00000000000896 76.0
DYD1_k127_1334309_5 Part of the twin-arginine translocation (Tat) system that transports large folded proteins containing a characteristic twin-arginine motif in their signal peptide across membranes. TatA could form the protein-conducting channel of the Tat system K03116 - - 0.00000000002014 68.0
DYD1_k127_1341228_0 FG-GAP repeat - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000001411 288.0
DYD1_k127_1364439_0 Catalyzes the hydroxylation of L-kynurenine (L-Kyn) to form 3-hydroxy-L-kynurenine (L-3OHKyn). Required for synthesis of quinolinic acid K00486 - 1.14.13.9 0.00000000000000000000000000000000000000000000000000000000000000009657 227.0
DYD1_k127_1364439_1 CHASE2 K01768 - 4.6.1.1 0.000000000000000000000000000000000000000000000000000009082 212.0
DYD1_k127_1369713_0 Glycosyl transferase, family 2 K07011 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000001042 287.0
DYD1_k127_1369713_1 GMC oxidoreductase - - - 0.000000000000000000000000000000000000000000000000000000000000653 221.0
DYD1_k127_1389937_0 that it carries out the mismatch recognition step. This protein has a weak ATPase activity K03555 GO:0003674,GO:0003676,GO:0003677,GO:0003684,GO:0003690,GO:0003824,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0006139,GO:0006259,GO:0006281,GO:0006298,GO:0006725,GO:0006807,GO:0006950,GO:0006974,GO:0008094,GO:0008150,GO:0008152,GO:0009987,GO:0016462,GO:0016787,GO:0016817,GO:0016818,GO:0016887,GO:0017111,GO:0030983,GO:0032300,GO:0032991,GO:0033554,GO:0034641,GO:0042623,GO:0043170,GO:0044237,GO:0044238,GO:0044260,GO:0044424,GO:0044464,GO:0046483,GO:0050896,GO:0051716,GO:0071704,GO:0090304,GO:0097159,GO:1901360,GO:1901363,GO:1990391 - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005854 483.0
DYD1_k127_1389937_1 asparaginase activity K01424 - 3.5.1.1 0.000000000000000000000000000000000000000000000000000000000001384 216.0
DYD1_k127_1389937_10 - - - - 0.0000000000061 68.0
DYD1_k127_1389937_11 the current gene model (or a revised gene model) may contain one or more premature stops and or frameshifts - - - 0.00000002486 56.0
DYD1_k127_1389937_13 - - - - 0.000002986 50.0
DYD1_k127_1389937_14 - - - - 0.00004249 47.0
DYD1_k127_1389937_2 protein conserved in cyanobacteria - - - 0.0000000000000000000000000000000000000000000000000000002953 200.0
DYD1_k127_1389937_3 COG NOG14600 non supervised orthologous group - - - 0.00000000000000000000000000000001717 127.0
DYD1_k127_1389937_4 23S rRNA-intervening sequence protein - - - 0.000000000000000000000000000005805 122.0
DYD1_k127_1389937_5 - - - - 0.00000000000000000000004074 100.0
DYD1_k127_1389937_6 COG NOG15344 non supervised orthologous group - - - 0.0000000000000000000008686 96.0
DYD1_k127_1389937_7 - - - - 0.0000000000000006696 78.0
DYD1_k127_1389937_8 - - - - 0.0000000000002489 71.0
DYD1_k127_1389937_9 ORF located using Blastx - - - 0.000000000001644 73.0
DYD1_k127_1400311_0 SpoIIAA-like - - - 0.00000000000000000000000000000000000006687 145.0
DYD1_k127_1400311_1 PRC-barrel domain - - - 0.00000000000000000000000000000000001422 148.0
DYD1_k127_1414485_0 Molybdopterin oxidoreductase Fe4S4 domain - - - 0.0 1170.0
DYD1_k127_1414485_1 Protein of unknown function (DUF1501) - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001481 343.0
DYD1_k127_1414485_2 Uncharacterized conserved protein (COG2071) - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001521 309.0
DYD1_k127_1414485_3 Protein of unknown function (DUF1549) - - - 0.0000000000000000000000000000000000000000000000000000000000000000000006746 258.0
DYD1_k127_1414485_4 MarR family - - - 0.00000000000000000000000000000000000000000000000000000000000000000002834 237.0
DYD1_k127_1414485_5 conserved protein (COG2071) - - - 0.000000000000000000000000000000000000000000000000000000000504 214.0
DYD1_k127_1414485_6 4-amino-4-deoxy-L-arabinose transferase activity K14340 - - 0.00000000000000000000000000000000000002031 163.0
DYD1_k127_1414485_7 - - - - 0.000000000002675 70.0
DYD1_k127_1414485_8 beta-galactosidase K01190 - 3.2.1.23 0.0006689 46.0
DYD1_k127_1415401_0 Belongs to the sodium solute symporter (SSF) (TC 2.A.21) family K03307 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001299 521.0
DYD1_k127_1415401_1 Thioesterase superfamily K01075,K07107 - 3.1.2.23 0.0000000000000000000000000000002093 127.0
DYD1_k127_1415401_2 - - - - 0.000000000000000000000000001527 117.0
DYD1_k127_1415401_3 Protein of unknown function (DUF2442) - - - 0.0000000000000000000000002071 108.0
DYD1_k127_1415401_4 Domain of unknown function (DUF4160) - - - 0.00000000000000005309 83.0
DYD1_k127_1425138_0 Zinc-binding dehydrogenase K00344 - 1.6.5.5 0.000000000000000000000000000000000000000000000000000000000002813 221.0
DYD1_k127_1427746_0 Subtilase family K08651,K14645 - 3.4.21.66 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002678 381.0
DYD1_k127_1427746_1 PFAM TadE family protein - - - 0.00000000236 69.0
DYD1_k127_1432250_0 Belongs to the peptidase S16 family K01338,K04076,K04770 - 3.4.21.53 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001554 559.0
DYD1_k127_1432250_1 HI0933-like protein - - - 0.00009998 48.0
DYD1_k127_1451471_0 FAD linked oxidase domain protein - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002557 435.0
DYD1_k127_1451471_1 PFAM asparagine synthase K01953 - 6.3.5.4 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002529 421.0
DYD1_k127_1451471_2 Involved in the cellular defense against the biological effects of O6-methylguanine (O6-MeG) and O4-methylthymine (O4-MeT) in DNA. Repairs the methylated nucleobase in DNA by stoichiometrically transferring the methyl group to a cysteine residue in the enzyme. This is a suicide reaction the enzyme is irreversibly inactivated K00567,K10778 - 2.1.1.63 0.000000000000000000000000000000000000000000000000000000000000000000000000007967 259.0
DYD1_k127_1451471_3 Glycosyl hydrolase family 20, domain 2 - - - 0.0000000000000000000000000000001919 140.0
DYD1_k127_1451471_4 D-alanine [D-alanyl carrier protein] ligase activity - - - 0.00000000003928 76.0
DYD1_k127_1453918_0 PFAM ABC transporter K01990 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000005762 285.0
DYD1_k127_1453918_1 ABC-2 family transporter protein K01992 - - 0.0000000000000000000000000000000000000000000006108 181.0
DYD1_k127_1453918_2 - - - - 0.0000000000000000001864 103.0
DYD1_k127_1457775_0 PFAM Glyoxalase bleomycin resistance protein dioxygenase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000152 268.0
DYD1_k127_1457775_1 YHS domain protein - - - 0.000000000000000000003634 97.0
DYD1_k127_1457775_2 - - - - 0.0000000000000002536 89.0
DYD1_k127_1467352_0 Catalyzes the conversion of D-ribulose 5-phosphate to formate and 3,4-dihydroxy-2-butanone 4-phosphate K14652 - 3.5.4.25,4.1.99.12 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009384 464.0
DYD1_k127_1467352_2 Belongs to the CDP-alcohol phosphatidyltransferase class-I family K00995,K08744 - 2.7.8.41,2.7.8.5 0.0000000001028 68.0
DYD1_k127_1467352_3 Acetyltransferase (GNAT) domain - - - 0.0000000004807 68.0
DYD1_k127_1471810_0 Belongs to the Glu Leu Phe Val dehydrogenases family K00261 - 1.4.1.3 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000171 587.0
DYD1_k127_1471810_1 SPFH domain / Band 7 family - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009093 359.0
DYD1_k127_1471810_2 serine-type endopeptidase activity K04771,K08372 - 3.4.21.107 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008623 362.0
DYD1_k127_1471810_3 Highly conserved protein containing a thioredoxin domain K06888 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002886 348.0
DYD1_k127_1471810_4 Involved in the regulation of the intracellular balance of NAD and NADP, and is a key enzyme in the biosynthesis of NADP. Catalyzes specifically the phosphorylation on 2'-hydroxyl of the adenosine moiety of NAD to yield NADP - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000933 301.0
DYD1_k127_1475156_0 undecaprenyl-phosphate glucose phosphotransferase activity - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006137 356.0
DYD1_k127_1475156_1 biosynthesis protein - - - 0.000000000000000000000000000004847 138.0
DYD1_k127_1475156_2 Protein involved in polysaccharide K01991 - - 0.000008507 58.0
DYD1_k127_1478638_0 calcium- and calmodulin-responsive adenylate cyclase activity - - - 0.000002397 61.0
DYD1_k127_1487125_0 this subunit has chaperone activity. The binding of ATP and its subsequent hydrolysis by HslU are essential for unfolding of protein substrates subsequently hydrolyzed by HslV. HslU recognizes the N-terminal part of its protein substrates and unfolds these before they are guided to HslV for hydrolysis K03667 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001776 522.0
DYD1_k127_1487125_1 Catalyzes the synthesis of 5,6-dihydrouridine (D), a modified base found in the D-loop of most tRNAs, via the reduction of the C5-C6 double bond in target uridines - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000032 377.0
DYD1_k127_1487125_2 COG0698 Ribose 5-phosphate isomerase RpiB K01808 - 5.3.1.6 0.000000000000000000000000000000000000000000000000002588 187.0
DYD1_k127_1487125_3 Mu-like prophage major head subunit gpT - - - 0.00000000000000000000000000000000000000275 158.0
DYD1_k127_1487125_4 Belongs to the SUA5 family K01104 - 3.1.3.48 0.000000000000000000000000000000000000167 147.0
DYD1_k127_1487125_5 TIGRFAM prepilin-type N-terminal cleavage methylation domain - - - 0.00000000009221 72.0
DYD1_k127_1487125_6 Protein of unknown function (DUF1320) - - - 0.0000000005485 66.0
DYD1_k127_1487125_7 - - - - 0.0000003902 61.0
DYD1_k127_1487125_8 Alpha beta hydrolase - - - 0.00003796 55.0
DYD1_k127_1489499_0 PA domain - - - 0.000000000000000000000000000000000000000000000000000000000002923 229.0
DYD1_k127_1489499_1 serine-type endopeptidase activity K04771 GO:0003674,GO:0005488,GO:0005515,GO:0042802 3.4.21.107 0.000002643 60.0
DYD1_k127_1500330_0 Animal haem peroxidase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001697 591.0
DYD1_k127_1500330_1 Met-10+ like-protein K06969 - 2.1.1.191 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008863 385.0
DYD1_k127_1500330_2 Protein of unknown function (DUF1501) - - - 0.0000000000000000000000000000000000000000000000000006138 191.0
DYD1_k127_150216_0 PFAM NHL repeat containing protein - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000002236 299.0
DYD1_k127_150216_1 Catalyzes the isomerization of citrate to isocitrate via cis-aconitate K01681 - 4.2.1.3 0.0000000000000000000000000000000000000000000000000000000000000000000000003076 255.0
DYD1_k127_150216_2 Catalyzes the irreversible transfer of a propylamine group from the amino donor S-adenosylmethioninamine (decarboxy- AdoMet) to putrescine (1,4-diaminobutane) to yield spermidine - - - 0.00000000000000000000000000000000000000000001058 171.0
DYD1_k127_150216_3 Catalyzes the irreversible transfer of a propylamine group from the amino donor S-adenosylmethioninamine (decarboxy- AdoMet) to putrescine (1,4-diaminobutane) to yield spermidine - - - 0.00000000000000000000000000000000000007722 163.0
DYD1_k127_150216_4 - - - - 0.000000000000006329 84.0
DYD1_k127_150216_5 Tetratricopeptide repeat - - - 0.000000004738 70.0
DYD1_k127_1512820_0 proteins of the AP superfamily - - - 0.0000000000000002092 93.0
DYD1_k127_1515464_0 Carbamoyl-phosphate synthetase large chain, oligomerisation domain K01955 - 6.3.5.5 4.611e-259 808.0
DYD1_k127_1524215_0 associated with various cellular activities K03924 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003168 448.0
DYD1_k127_1524215_1 protein (some members contain a von Willebrand factor type A (vWA) domain) - - - 0.000000000000000000000000000000000000000000000004968 176.0
DYD1_k127_152607_0 Cytochrome c oxidase is the component of the respiratory chain that catalyzes the reduction of oxygen to water. Subunits 1- 3 form the functional core of the enzyme complex. CO I is the catalytic subunit of the enzyme. Electrons originating in cytochrome c are transferred via the copper A center of subunit 2 and heme A of subunit 1 to the bimetallic center formed by heme A3 and copper B K02274 GO:0005575,GO:0005623,GO:0005886,GO:0006091,GO:0006810,GO:0006811,GO:0006812,GO:0008150,GO:0008152,GO:0009060,GO:0009987,GO:0015672,GO:0015980,GO:0015988,GO:0015990,GO:0016020,GO:0022900,GO:0022904,GO:0034220,GO:0044237,GO:0044464,GO:0045333,GO:0051179,GO:0051234,GO:0055085,GO:0055114,GO:0071944,GO:0098655,GO:0098660,GO:0098662,GO:1902600 1.9.3.1 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004469 524.0
DYD1_k127_152607_1 Cytochrome c oxidase subunit III K02276 - 1.9.3.1 0.00000000000000000000000000000000000000000000000000000000000008566 222.0
DYD1_k127_152607_2 Cytochrome C oxidase subunit II, periplasmic domain K02275 - 1.9.3.1 0.00000000000000000000000000000000000000000000000004603 192.0
DYD1_k127_152607_3 Cytochrome oxidase assembly protein K02259 - - 0.000000000000000000000000000000000000000000000007498 180.0
DYD1_k127_152607_4 PFAM blue (type 1) copper domain protein - - - 0.000000000000000000000000000000000000003755 158.0
DYD1_k127_152607_5 Prokaryotic Cytochrome C oxidase subunit IV - - - 0.0000003193 56.0
DYD1_k127_1555031_0 - catabolite gene activator and regulatory subunit of cAMP-dependent protein K01420,K15861 - - 0.000000000000000245 82.0
DYD1_k127_1555031_1 - - - - 0.0000000000002137 77.0
DYD1_k127_1555031_2 Belongs to the small heat shock protein (HSP20) family K13993 - - 0.000000001211 60.0
DYD1_k127_1555589_0 GTPase that plays an essential role in the late steps of ribosome biogenesis K03977 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002102 401.0
DYD1_k127_1555589_1 - - - - 0.00000001742 66.0
DYD1_k127_1555589_2 overlaps another CDS with the same product name K16091 - - 0.000005896 56.0
DYD1_k127_1562271_0 Possible lysine decarboxylase K06966 - 3.2.2.10 0.000000000000000000000000000000000000000001965 161.0
DYD1_k127_1562271_2 Could be involved in insertion of integral membrane proteins into the membrane K08998 - - 0.00000000000000000000000002571 110.0
DYD1_k127_15767_0 Integral membrane protein (PIN domain superfamily) - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003675 343.0
DYD1_k127_15767_1 PFAM regulatory protein, LysR - - - 0.00000000000000000000000000000000000000000000004091 181.0
DYD1_k127_15767_2 Protein-L-isoaspartate(D-aspartate) O-methyltransferase (PCMT) - - - 0.00000000000000000000000000000000001749 144.0
DYD1_k127_15767_3 COG1651 Protein-disulfide isomerase K21990 - - 0.0000000000000000000000000002194 119.0
DYD1_k127_15767_4 - - - - 0.000000000002195 72.0
DYD1_k127_15767_5 RHS Repeat - - - 0.00000000002686 72.0
DYD1_k127_15767_6 - - - - 0.0007217 52.0
DYD1_k127_1583702_0 PQQ-like domain - - - 0.000000000000000000000000000000000000000000000000000000711 209.0
DYD1_k127_1583702_1 - - - - 0.000000000000000000000000000000002695 144.0
DYD1_k127_1583702_2 PQQ-like domain - - - 0.000000000000000000000000000001811 131.0
DYD1_k127_1583702_3 NUDIX domain - - - 0.00000000000000000008318 94.0
DYD1_k127_1583702_4 ParE toxin of type II toxin-antitoxin system, parDE K19092 - - 0.0000000000000004998 82.0
DYD1_k127_1583702_5 Bacterial antitoxin of ParD toxin-antitoxin type II system and RHH K07746 - - 0.0000016 53.0
DYD1_k127_1583702_6 protein conserved in bacteria - - - 0.000004933 49.0
DYD1_k127_1591785_0 Belongs to the SpoVG family K06412 - - 0.0000000000000000000000000000000000000000000000000004432 197.0
DYD1_k127_1591785_1 Catalyzes the phosphorylation of the position 2 hydroxy group of 4-diphosphocytidyl-2C-methyl-D-erythritol K00919 - 2.7.1.148 0.000000000000000000000000000000000000000001063 169.0
DYD1_k127_1591785_2 Domain of unknown function (DUF368) K08974 - - 0.0000000000000000000000000000001322 135.0
DYD1_k127_1599892_0 Uroporphyrin-III C-methyltransferase K02303,K13542 - 2.1.1.107,4.2.1.75 0.000000000000000000000000000000000000000000000000000000000000000007342 234.0
DYD1_k127_1599892_1 Tetrapolymerization of the monopyrrole PBG into the hydroxymethylbilane pre-uroporphyrinogen in several discrete steps K01749 GO:0003674,GO:0003824,GO:0004418,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005886,GO:0006725,GO:0006778,GO:0006779,GO:0006783,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009987,GO:0016020,GO:0016740,GO:0016765,GO:0018130,GO:0019438,GO:0033013,GO:0033014,GO:0034641,GO:0040007,GO:0042168,GO:0042440,GO:0044237,GO:0044249,GO:0044271,GO:0044424,GO:0044464,GO:0046148,GO:0046483,GO:0051186,GO:0051188,GO:0071704,GO:0071944,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576 2.5.1.61 0.000000000000000000000000000000000000000000000000006256 204.0
DYD1_k127_1599892_2 Catalyzes the NADPH-dependent reduction of glutamyl- tRNA(Glu) to glutamate 1-semialdehyde (GSA) K02492 - 1.2.1.70 0.00000000000000000000000000000000000000000002325 175.0
DYD1_k127_1601269_0 Adenylyl- / guanylyl cyclase, catalytic domain K01768 - 4.6.1.1 0.00000000000000000000000000000000000000000000000000000000001323 224.0
DYD1_k127_1601269_1 pfam abc1 K03688 - - 0.0000000000000000000000387 104.0
DYD1_k127_1606107_0 antibiotic catabolic process K13277 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000006554 301.0
DYD1_k127_1606107_1 Low-density lipoprotein-receptor YWTD domain - - - 0.0000000000000000000000000000000000000000000000000000000004198 220.0
DYD1_k127_1606107_2 PFAM NHL repeat containing protein - - - 0.0000000000000000000000000000147 136.0
DYD1_k127_1606107_3 chitinase activity K01186,K05994,K13381 - 3.2.1.14,3.2.1.17,3.2.1.18,3.4.11.10 0.00002136 57.0
DYD1_k127_1606107_4 Cartilage oligomeric matrix protein K04659,K16857 GO:0001501,GO:0001968,GO:0002020,GO:0003416,GO:0003417,GO:0003674,GO:0005198,GO:0005201,GO:0005488,GO:0005496,GO:0005499,GO:0005509,GO:0005515,GO:0005518,GO:0005539,GO:0005575,GO:0005576,GO:0005912,GO:0005924,GO:0005927,GO:0007155,GO:0007275,GO:0007517,GO:0008150,GO:0008201,GO:0008289,GO:0009653,GO:0009887,GO:0009888,GO:0009987,GO:0010941,GO:0016043,GO:0016203,GO:0019842,GO:0019899,GO:0022610,GO:0030054,GO:0030055,GO:0030198,GO:0031012,GO:0032501,GO:0032502,GO:0032991,GO:0033627,GO:0035265,GO:0036094,GO:0040007,GO:0042981,GO:0043062,GO:0043066,GO:0043067,GO:0043069,GO:0043167,GO:0043168,GO:0043169,GO:0043394,GO:0043395,GO:0044421,GO:0044877,GO:0046872,GO:0048513,GO:0048519,GO:0048523,GO:0048589,GO:0048705,GO:0048731,GO:0048736,GO:0048856,GO:0050789,GO:0050794,GO:0051216,GO:0060173,GO:0060348,GO:0060349,GO:0060350,GO:0060351,GO:0060538,GO:0060548,GO:0061061,GO:0061448,GO:0062023,GO:0065007,GO:0070161,GO:0071840,GO:0097159,GO:0097367,GO:0098868,GO:1901681 - 0.0001724 54.0
DYD1_k127_1607870_0 Catalyzes the N-acylation of UDP-3-O-acylglucosamine using 3-hydroxyacyl-ACP as the acyl donor. Is involved in the biosynthesis of lipid A, a phosphorylated glycolipid that anchors the lipopolysaccharide to the outer membrane of the cell K02536 GO:0003674,GO:0003824,GO:0005975,GO:0006629,GO:0006643,GO:0006644,GO:0006664,GO:0006793,GO:0006796,GO:0008150,GO:0008152,GO:0008610,GO:0008654,GO:0009058,GO:0009245,GO:0009247,GO:0009311,GO:0009312,GO:0009987,GO:0016051,GO:0016740,GO:0016746,GO:0016747,GO:0019637,GO:0044237,GO:0044238,GO:0044249,GO:0044255,GO:0046467,GO:0046493,GO:0071704,GO:0090407,GO:1901135,GO:1901137,GO:1901269,GO:1901271,GO:1901576,GO:1903509 2.3.1.191 0.0000000000000000000000000000000000000000000000000000000000000000000000000000005483 277.0
DYD1_k127_1607870_1 Transcriptional regulatory protein, C terminal - - - 0.00000000000000000000000000000000000000000000000000009608 191.0
DYD1_k127_1607870_2 cobalamin binding - - - 0.0000000000000000000000000000000000005025 150.0
DYD1_k127_1607870_3 Tyrosine phosphatase family - - - 0.00000000000000000000000000001136 128.0
DYD1_k127_1607870_4 Phospholipid methyltransferase - - - 0.000005826 57.0
DYD1_k127_1611196_0 Belongs to the AlaDH PNT family K00259 - 1.4.1.1 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008808 462.0
DYD1_k127_1611196_1 lipoprotein transporter activity K02003 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000002113 266.0
DYD1_k127_1611196_2 MacB-like periplasmic core domain K02004 - - 0.000000000000000000000000000000000000000000000000000000000000000000000003973 259.0
DYD1_k127_1611196_3 serine threonine protein kinase - - - 0.0000000000000000000000000000000000000000000000000000004733 203.0
DYD1_k127_1611196_4 His Kinase A (phosphoacceptor) domain - - - 0.000000000000000000000000000000000000000001097 172.0
DYD1_k127_1611196_5 Reversibly transfers an adenylyl group from ATP to 4'- phosphopantetheine, yielding dephospho-CoA (dPCoA) and pyrophosphate K00954 - 2.7.7.3 0.0000000000000000000000000000000000008131 144.0
DYD1_k127_1611196_6 CheY-like receiver AAA-type ATPase and DNA-binding domains - - - 0.000000000000000000000000003443 115.0
DYD1_k127_1611196_7 Protein of unknown function (DUF456) K09793 - - 0.0000000000000008186 84.0
DYD1_k127_1611196_8 Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family K02005 - - 0.0000000001002 74.0
DYD1_k127_1621615_0 Required for chromosome condensation and partitioning K03529 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000003509 297.0
DYD1_k127_1626797_0 PFAM NAD-dependent epimerase dehydratase K00091 - 1.1.1.219 0.000000000000000000000000000000000000005241 158.0
DYD1_k127_1633994_0 - - - - 0.00000000001419 72.0
DYD1_k127_1649070_0 phosphopantetheine binding - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001082 325.0
DYD1_k127_1649070_1 Formyl transferase - - - 0.0000000000001803 84.0
DYD1_k127_1649070_2 transferase hexapeptide repeat K00633 - 2.3.1.18 0.00000000002687 77.0
DYD1_k127_1649070_3 Specifically methylates the 50S ribosomal protein L3 on a specific glutamine residue K07320 - 2.1.1.298 0.000715 50.0
DYD1_k127_1655790_0 Belongs to the glycosyl hydrolase 31 family K01187 - 3.2.1.20 7.18e-201 653.0
DYD1_k127_1655790_1 Belongs to the glycosyl hydrolase 31 family K01187 - 3.2.1.20 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001605 578.0
DYD1_k127_1655790_2 COGs COG0395 ABC-type sugar transport system permease component K02026 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000878 254.0
DYD1_k127_1655790_3 PFAM binding-protein-dependent transport systems inner membrane component K02025 - - 0.00000000000000000000000000001498 120.0
DYD1_k127_1671653_0 Arabinose 5-phosphate isomerase K06041 - 5.3.1.13 0.000000000000000000000000000000000000000000000000000000000000000000000000000007028 274.0
DYD1_k127_1671653_1 protein involved in exopolysaccharide biosynthesis K16554 - - 0.00000000000000000000000000000000000000000002083 185.0
DYD1_k127_1684228_0 mechanosensitive ion channel K05802 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002086 480.0
DYD1_k127_1684228_1 PFAM ATPase family associated with various cellular activities (AAA) K03924 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002412 444.0
DYD1_k127_1684228_2 PFAM Na H antiporter - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001499 336.0
DYD1_k127_1684228_3 Protein of unknown function DUF58 - GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005886,GO:0008150,GO:0016020,GO:0040007,GO:0044424,GO:0044444,GO:0044464,GO:0071944 - 0.0000000000000000000000000000000000000001999 151.0
DYD1_k127_1689896_0 response regulator receiver K13041 - - 0.000000000000000000000000000000000000000000000000000001063 198.0
DYD1_k127_1689896_1 Alpha/beta hydrolase family - - - 0.000000000000000000000000000000000000008557 153.0
DYD1_k127_1689896_2 Tetratricopeptide repeat - - - 0.00000007628 59.0
DYD1_k127_1690955_0 Carbamoyltransferase C-terminus K00612 - - 1.938e-223 703.0
DYD1_k127_1690955_1 Lipase maturation factor - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007377 315.0
DYD1_k127_1690955_2 - - - - 0.00000000000003289 79.0
DYD1_k127_1690955_3 - - - - 0.0000000002262 67.0
DYD1_k127_169479_0 COG1108 ABC-type Mn2 Zn2 transport systems permease K11708 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001374 408.0
DYD1_k127_169479_1 Belongs to the bacterial solute-binding protein 9 family K11604,K11707 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001474 361.0
DYD1_k127_169479_2 ATPases associated with a variety of cellular activities K11607,K11710 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001745 358.0
DYD1_k127_169479_3 Iron dependent repressor, metal binding and dimerisation domain K09819,K11709 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009742 335.0
DYD1_k127_169479_4 iron dependent repressor K03709,K11924 - - 0.000000000000000000000000000000000000005054 151.0
DYD1_k127_1712561_0 Catalyzes the attachment of glutamate to tRNA(Glu) in a two-step reaction glutamate is first activated by ATP to form Glu-AMP and then transferred to the acceptor end of tRNA(Glu) K01885 - 6.1.1.17 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004404 351.0
DYD1_k127_1712561_1 Catalyzes the irreversible transfer of a propylamine group from the amino donor S-adenosylmethioninamine (decarboxy- AdoMet) to putrescine (1,4-diaminobutane) to yield spermidine - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006583 327.0
DYD1_k127_1712561_2 rna polymerase sigma-54 factor K03092 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000748 315.0
DYD1_k127_1712561_3 Part of the twin-arginine translocation (Tat) system that transports large folded proteins containing a characteristic twin-arginine motif in their signal peptide across membranes K03118 - - 0.0000000000000000000000000000000000006936 154.0
DYD1_k127_1712561_4 Toxic component of a toxin-antitoxin (TA) module K07171 GO:0008150,GO:0040008,GO:0045926,GO:0048519,GO:0050789,GO:0065007 - 0.00000000000003517 76.0
DYD1_k127_1712561_5 serine-type D-Ala-D-Ala carboxypeptidase activity K07259 GO:0000003,GO:0000270,GO:0000910,GO:0003674,GO:0003824,GO:0004175,GO:0004180,GO:0004185,GO:0005488,GO:0005575,GO:0005623,GO:0006022,GO:0006026,GO:0006027,GO:0006508,GO:0006807,GO:0007049,GO:0008144,GO:0008150,GO:0008152,GO:0008233,GO:0008236,GO:0008238,GO:0008360,GO:0008658,GO:0009002,GO:0009056,GO:0009057,GO:0009253,GO:0009254,GO:0009987,GO:0016043,GO:0016787,GO:0016998,GO:0017171,GO:0019538,GO:0019954,GO:0022402,GO:0022414,GO:0022603,GO:0022604,GO:0030203,GO:0030288,GO:0030313,GO:0031406,GO:0031975,GO:0032505,GO:0033218,GO:0033293,GO:0036094,GO:0042597,GO:0043093,GO:0043167,GO:0043168,GO:0043170,GO:0043177,GO:0044036,GO:0044237,GO:0044238,GO:0044248,GO:0044260,GO:0044464,GO:0045229,GO:0050789,GO:0050793,GO:0050794,GO:0051128,GO:0051301,GO:0065007,GO:0065008,GO:0070008,GO:0070011,GO:0071554,GO:0071555,GO:0071704,GO:0071840,GO:0097159,GO:0140096,GO:1901135,GO:1901136,GO:1901363,GO:1901564,GO:1901565,GO:1901575,GO:1901681 3.4.16.4 0.00000002191 66.0
DYD1_k127_1714614_0 Catalyzes the ADP transfer from ATP to D-glycero-beta-D- manno-heptose 1-phosphate, yielding ADP-D-glycero-beta-D-manno- heptose K03272 - 2.7.1.167,2.7.7.70 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006171 408.0
DYD1_k127_1714614_1 Glycosyltransferase like family 2 - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000008135 278.0
DYD1_k127_1714614_2 translation initiation factor activity K03496,K09000 GO:0005575,GO:0005622,GO:0005623,GO:0005886,GO:0008150,GO:0009295,GO:0016020,GO:0040007,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043590,GO:0044424,GO:0044464,GO:0071944 - 0.00000000000000000000000000000000000000000000000000000000000000000000000000001406 276.0
DYD1_k127_1714614_3 Bacterial regulatory proteins, tetR family - - - 0.000000000000000000000000000000000001232 147.0
DYD1_k127_1714940_0 PFAM UDP-glucose GDP-mannose dehydrogenase K02474,K13015 - 1.1.1.136 2.572e-276 858.0
DYD1_k127_1714940_1 Helix-turn-helix domain - - - 0.000000001596 60.0
DYD1_k127_1714940_2 PFAM Type II secretion system protein E K02669 - - 0.0001318 46.0
DYD1_k127_1721195_0 Belongs to the BshC family K22136 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009489 357.0
DYD1_k127_1721195_1 TM2 domain - - - 0.000000000000000000000000009561 113.0
DYD1_k127_1746756_1 LVIVD repeat - - - 0.000000000006804 78.0
DYD1_k127_1746756_3 Aminoacyl-tRNA editing domain K19055 - - 0.00003852 47.0
DYD1_k127_1747177_0 FeS assembly protein SufD K07033,K09015 GO:0006790,GO:0006950,GO:0006979,GO:0008150,GO:0008152,GO:0009987,GO:0016043,GO:0016226,GO:0022607,GO:0031163,GO:0044085,GO:0044237,GO:0050896,GO:0051186,GO:0071840 - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004345 465.0
DYD1_k127_1747177_1 Fe-S assembly ATPase, SufC K09013 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006802 380.0
DYD1_k127_1747177_2 Catalyzes the removal of elemental sulfur and selenium atoms from L-cysteine, L-cystine, L-selenocysteine, and L- selenocystine to produce L-alanine K11717 - 2.8.1.7,4.4.1.16 0.00000000000000000000000000000000000000000000000000000000000000000000000002756 259.0
DYD1_k127_1748924_0 COG2805 Tfp pilus assembly protein, pilus retraction ATPase PilT K02669 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005107 338.0
DYD1_k127_1748924_1 regulation of translation K03530 - - 0.0000000000000000000000000000282 119.0
DYD1_k127_1748924_2 Domain of unknown function (DUF4190) - - - 0.00000364 58.0
DYD1_k127_1748924_3 - - - - 0.00017 53.0
DYD1_k127_1800115_0 Heparinase II/III N-terminus - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000003177 283.0
DYD1_k127_1800115_1 COG1208 Nucleoside-diphosphate-sugar pyrophosphorylase involved in lipopolysaccharide biosynthesis translation initiation factor 2B, gamma epsilon subunits eIF-2Bgamma eIF-2Bepsilon K00966,K05305,K16881 - 2.7.1.52,2.7.7.13,5.4.2.8 0.000000000000000000000000000000000000000000000027 185.0
DYD1_k127_1800115_2 serine threonine protein kinase K08884,K12132 - 2.7.11.1 0.0000000000000000000000000000001311 129.0
DYD1_k127_1827798_0 COGs COG2356 Endonuclease I - - - 0.00000000000000000000000000000000000000000000000000000004239 223.0
DYD1_k127_1827798_1 - - - - 0.0000000000000000000000000000000000001275 164.0
DYD1_k127_1827798_2 TPR repeat - - - 0.00000000000000000000000000009958 134.0
DYD1_k127_1827798_3 endonuclease I - - - 0.0000000000000003509 87.0
DYD1_k127_1827798_4 amino acid activation for nonribosomal peptide biosynthetic process K06045 - 4.2.1.129,5.4.99.17 0.000000000000003537 90.0
DYD1_k127_1827798_5 PFAM Appr-1-p processing domain protein - - - 0.000004629 49.0
DYD1_k127_1837989_0 Prevents misfolding and promotes the refolding and proper assembly of unfolded polypeptides generated under stress conditions K04077 GO:0003674,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006457,GO:0006458,GO:0008150,GO:0009987,GO:0016465,GO:0032991,GO:0044183,GO:0044424,GO:0044444,GO:0044445,GO:0044464,GO:0051082,GO:0061077,GO:0101031,GO:1990220 - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001392 511.0
DYD1_k127_1837989_1 Prevents misfolding and promotes the refolding and proper assembly of unfolded polypeptides generated under stress conditions K04077 GO:0003674,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006457,GO:0006458,GO:0008150,GO:0009987,GO:0016465,GO:0032991,GO:0044183,GO:0044424,GO:0044444,GO:0044445,GO:0044464,GO:0051082,GO:0061077,GO:0101031,GO:1990220 - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004694 469.0
DYD1_k127_1837989_2 Binds to Cpn60 in the presence of Mg-ATP and suppresses the ATPase activity of the latter K04078 GO:0003674,GO:0005488,GO:0005515,GO:0006457,GO:0006458,GO:0006950,GO:0006986,GO:0008150,GO:0009987,GO:0010033,GO:0035966,GO:0042221,GO:0043167,GO:0043169,GO:0046872,GO:0050896,GO:0051082,GO:0051084,GO:0051085,GO:0051087,GO:0061077 - 0.00000000000000000000000000000000000000000002017 163.0
DYD1_k127_1852280_0 Outer membrane protein assembly complex, YaeT protein K07277 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005609 457.0
DYD1_k127_1852280_1 COG3030 Protein affecting phage T7 exclusion by the F plasmid K07113 - - 0.0000000000000000000000001636 111.0
DYD1_k127_1852280_2 tRNA nucleotidyltransferase poly(A) polymerase K00974 - 2.7.7.72 0.0000003463 54.0
DYD1_k127_1857407_0 alkyl hydroperoxide reductase Thiol specific antioxidant Mal allergen - - - 0.00000003244 66.0
DYD1_k127_1857407_1 This protein specifically catalyzes the removal of signal peptides from prolipoproteins K03101 - 3.4.23.36 0.00006204 50.0
DYD1_k127_1889404_0 Specifically methylates the N4 position of cytidine in position 1402 (C1402) of 16S rRNA K03438 GO:0000154,GO:0001510,GO:0003674,GO:0003824,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006139,GO:0006364,GO:0006396,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0008168,GO:0008170,GO:0008173,GO:0008649,GO:0008757,GO:0009451,GO:0009987,GO:0010467,GO:0016070,GO:0016072,GO:0016434,GO:0016740,GO:0016741,GO:0022613,GO:0031167,GO:0032259,GO:0034470,GO:0034641,GO:0034660,GO:0042254,GO:0043170,GO:0043412,GO:0043414,GO:0044085,GO:0044237,GO:0044238,GO:0044260,GO:0044424,GO:0044464,GO:0046483,GO:0070475,GO:0071424,GO:0071704,GO:0071840,GO:0090304,GO:0140098,GO:0140102,GO:1901360 2.1.1.199 0.000000000000000000000000000000000000000000000000000000000000000002644 236.0
DYD1_k127_1889404_1 - - - - 0.00000000000000000000000128 109.0
DYD1_k127_1889404_2 Ferritin-like domain K03594 - 1.16.3.1 0.00000004457 54.0
DYD1_k127_1916523_0 SMART ATP-binding region ATPase domain protein K03320 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002182 489.0
DYD1_k127_1916523_1 metal-dependent phosphohydrolase HD sub domain K07814 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003828 400.0
DYD1_k127_1916523_2 Two component transcriptional regulator, winged helix family K02483 - - 0.0000000000000006085 82.0
DYD1_k127_1920050_0 Glycosyl transferase family 21 - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004065 411.0
DYD1_k127_1920050_1 Catalyzes the reductive methylation of 2'-deoxyuridine- 5'-monophosphate (dUMP) to 2'-deoxythymidine-5'-monophosphate (dTMP) while utilizing 5,10-methylenetetrahydrofolate (mTHF) as the methyl donor and reductant in the reaction, yielding dihydrofolate (DHF) as a by-product. This enzymatic reaction provides an intracellular de novo source of dTMP, an essential precursor for DNA biosynthesis K00560 GO:0000287,GO:0003674,GO:0003824,GO:0004799,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006139,GO:0006220,GO:0006221,GO:0006231,GO:0006244,GO:0006725,GO:0006753,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0008168,GO:0009056,GO:0009058,GO:0009117,GO:0009123,GO:0009124,GO:0009125,GO:0009129,GO:0009130,GO:0009131,GO:0009157,GO:0009159,GO:0009162,GO:0009165,GO:0009166,GO:0009176,GO:0009177,GO:0009178,GO:0009219,GO:0009221,GO:0009223,GO:0009262,GO:0009263,GO:0009264,GO:0009265,GO:0009314,GO:0009394,GO:0009628,GO:0009987,GO:0016740,GO:0016741,GO:0018130,GO:0019438,GO:0019439,GO:0019637,GO:0019692,GO:0032259,GO:0034404,GO:0034641,GO:0034654,GO:0034655,GO:0042083,GO:0043167,GO:0043169,GO:0044237,GO:0044238,GO:0044248,GO:0044249,GO:0044270,GO:0044271,GO:0044281,GO:0044283,GO:0044424,GO:0044444,GO:0044464,GO:0046073,GO:0046078,GO:0046079,GO:0046385,GO:0046386,GO:0046434,GO:0046483,GO:0046700,GO:0046872,GO:0050896,GO:0055086,GO:0071704,GO:0072527,GO:0072528,GO:0072529,GO:0090407,GO:1901135,GO:1901136,GO:1901137,GO:1901292,GO:1901293,GO:1901360,GO:1901361,GO:1901362,GO:1901564,GO:1901565,GO:1901566,GO:1901575,GO:1901576 2.1.1.45 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001201 304.0
DYD1_k127_1920050_2 ATPase activity K01990 - - 0.000000000000000000000000000000000000000000000000000000008006 210.0
DYD1_k127_1920050_3 BNR repeat-like domain - - - 0.0000000000000000000000000000000000000000000002075 184.0
DYD1_k127_1920050_4 - - - - 0.000000000837 64.0
DYD1_k127_192108_0 Trypsin-like peptidase domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000117 269.0
DYD1_k127_192108_1 - - - - 0.0000000000000000000000000000000000000000000000000000005515 200.0
DYD1_k127_1924051_0 Polysulphide reductase, NrfD K00185 - - 1.716e-220 694.0
DYD1_k127_1924051_1 PFAM 4Fe-4S ferredoxin, iron-sulfur binding domain protein K00184,K04014 GO:0003674,GO:0003824,GO:0008150,GO:0008152,GO:0016491,GO:0016661,GO:0016662,GO:0042279,GO:0055114,GO:0098809 - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000346 570.0
DYD1_k127_1924051_2 ABC-type Zn2 transport system, periplasmic component surface adhesin - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004135 345.0
DYD1_k127_1924051_3 Protein of unknown function (DUF3341) - - - 0.000000000000000000000000000000000000000000000000000000000000000000005429 238.0
DYD1_k127_1924051_4 Cytochrome C oxidase, cbb3-type, subunit III - - - 0.00000000000000000000000000000000000000000000000001124 187.0
DYD1_k127_1929300_0 Glycosyl transferase family 2 - - - 0.0000000000000000000000000000000000000000000000000000000000000000000356 241.0
DYD1_k127_1929300_1 phosphate transporter - - - 0.0000000000000000000000000000000000000000000000004431 195.0
DYD1_k127_1929300_2 Protein of unknown function DUF47 K07220 - - 0.00000000000000000000000000000000000000000000003484 179.0
DYD1_k127_1929300_3 Belongs to the GPI family K01810 GO:0003674,GO:0003824,GO:0004347,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005975,GO:0005996,GO:0006006,GO:0006082,GO:0006090,GO:0006091,GO:0006094,GO:0006096,GO:0006139,GO:0006163,GO:0006164,GO:0006165,GO:0006725,GO:0006732,GO:0006733,GO:0006753,GO:0006754,GO:0006757,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0009056,GO:0009058,GO:0009108,GO:0009117,GO:0009123,GO:0009124,GO:0009126,GO:0009127,GO:0009132,GO:0009135,GO:0009141,GO:0009142,GO:0009144,GO:0009145,GO:0009150,GO:0009152,GO:0009156,GO:0009161,GO:0009165,GO:0009166,GO:0009167,GO:0009168,GO:0009179,GO:0009185,GO:0009199,GO:0009201,GO:0009205,GO:0009206,GO:0009259,GO:0009260,GO:0009987,GO:0016051,GO:0016052,GO:0016053,GO:0016310,GO:0016853,GO:0016860,GO:0016861,GO:0017144,GO:0018130,GO:0019318,GO:0019319,GO:0019359,GO:0019362,GO:0019363,GO:0019438,GO:0019439,GO:0019637,GO:0019693,GO:0019752,GO:0032787,GO:0034404,GO:0034641,GO:0034654,GO:0034655,GO:0042866,GO:0043436,GO:0044237,GO:0044238,GO:0044248,GO:0044249,GO:0044270,GO:0044271,GO:0044281,GO:0044283,GO:0044424,GO:0044464,GO:0046031,GO:0046034,GO:0046364,GO:0046390,GO:0046394,GO:0046434,GO:0046483,GO:0046496,GO:0046700,GO:0046939,GO:0051186,GO:0051188,GO:0055086,GO:0071704,GO:0072330,GO:0072521,GO:0072522,GO:0072524,GO:0072525,GO:0090407,GO:1901135,GO:1901137,GO:1901292,GO:1901293,GO:1901360,GO:1901361,GO:1901362,GO:1901564,GO:1901566,GO:1901575,GO:1901576 5.3.1.9 0.0005684 53.0
DYD1_k127_1941942_0 Glucose / Sorbosone dehydrogenase - - - 0.000000000000000000000000000000000000000000002384 184.0
DYD1_k127_1941942_1 Xylose isomerase-like TIM barrel - - - 0.00000000000000000000000000000000000000001561 162.0
DYD1_k127_1982880_0 Alpha beta hydrolase - - - 0.00009934 55.0
DYD1_k127_1982880_1 Amidinotransferase - - - 0.000885 46.0
DYD1_k127_199338_0 peptidase S9 prolyl oligopeptidase active site - GO:0003674,GO:0003824,GO:0004177,GO:0005488,GO:0005515,GO:0005575,GO:0005623,GO:0006508,GO:0006518,GO:0006807,GO:0008150,GO:0008152,GO:0008233,GO:0008238,GO:0008239,GO:0009056,GO:0009987,GO:0016787,GO:0019538,GO:0033218,GO:0034641,GO:0042277,GO:0042597,GO:0042802,GO:0042803,GO:0043170,GO:0043171,GO:0043603,GO:0044237,GO:0044238,GO:0044248,GO:0044464,GO:0046983,GO:0070011,GO:0071704,GO:0140096,GO:1901564,GO:1901565,GO:1901575 - 0.0 1023.0
DYD1_k127_199338_1 Belongs to the KdsA family K01627 - 2.5.1.55 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001975 323.0
DYD1_k127_199338_2 COG0639 Diadenosine tetraphosphatase and related - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000005617 300.0
DYD1_k127_199338_3 Required for the insertion and or proper folding and or complex formation of integral membrane proteins into the membrane. Involved in integration of membrane proteins that insert both dependently and independently of the Sec translocase complex, as well as at least some lipoproteins. Aids folding of multispanning membrane proteins K03217 - - 0.0000000000000000000000000000000000000000000000000000105 213.0
DYD1_k127_199338_4 TM2 domain - - - 0.0000000000000000006484 95.0
DYD1_k127_199338_5 PFAM Uncharacterised protein family UPF0150 - - - 0.000000000000000005855 85.0
DYD1_k127_199338_6 Trm112p-like protein K09791 - - 0.00000000000000002917 83.0
DYD1_k127_199338_7 Src homology 3 domains - - - 0.00000001227 68.0
DYD1_k127_199338_8 Belongs to the phosphoglycerate mutase family - GO:0000287,GO:0001666,GO:0003674,GO:0003824,GO:0004619,GO:0005488,GO:0005575,GO:0005618,GO:0005623,GO:0005975,GO:0006082,GO:0006090,GO:0006091,GO:0006096,GO:0006139,GO:0006163,GO:0006164,GO:0006165,GO:0006725,GO:0006732,GO:0006733,GO:0006753,GO:0006754,GO:0006757,GO:0006793,GO:0006796,GO:0006807,GO:0006950,GO:0008150,GO:0008152,GO:0009056,GO:0009058,GO:0009108,GO:0009117,GO:0009123,GO:0009124,GO:0009126,GO:0009127,GO:0009132,GO:0009135,GO:0009141,GO:0009142,GO:0009144,GO:0009145,GO:0009150,GO:0009152,GO:0009156,GO:0009161,GO:0009165,GO:0009166,GO:0009167,GO:0009168,GO:0009179,GO:0009185,GO:0009199,GO:0009201,GO:0009205,GO:0009206,GO:0009259,GO:0009260,GO:0009628,GO:0009987,GO:0016052,GO:0016053,GO:0016310,GO:0016853,GO:0016866,GO:0016868,GO:0017144,GO:0018130,GO:0019359,GO:0019362,GO:0019363,GO:0019438,GO:0019439,GO:0019637,GO:0019693,GO:0019752,GO:0030312,GO:0032787,GO:0034404,GO:0034641,GO:0034654,GO:0034655,GO:0036293,GO:0042866,GO:0043167,GO:0043169,GO:0043436,GO:0044237,GO:0044238,GO:0044248,GO:0044249,GO:0044270,GO:0044271,GO:0044281,GO:0044283,GO:0044464,GO:0046031,GO:0046034,GO:0046390,GO:0046394,GO:0046434,GO:0046483,GO:0046496,GO:0046700,GO:0046872,GO:0046939,GO:0050896,GO:0051186,GO:0051188,GO:0055086,GO:0070482,GO:0071704,GO:0071944,GO:0072330,GO:0072521,GO:0072522,GO:0072524,GO:0072525,GO:0090407,GO:1901135,GO:1901137,GO:1901292,GO:1901293,GO:1901360,GO:1901361,GO:1901362,GO:1901564,GO:1901566,GO:1901575,GO:1901576 - 0.00000008952 63.0
DYD1_k127_2001731_0 PFAM SMP-30 Gluconolaconase - - - 0.000000000000000000000000005145 128.0
DYD1_k127_2009998_0 PFAM SPFH domain Band 7 family K07192 - - 0.00000000000000000000000000000000000000000003515 169.0
DYD1_k127_2009998_1 - - - - 0.00000000000000000116 94.0
DYD1_k127_2009998_2 ParE toxin of type II toxin-antitoxin system, parDE K19092 - - 0.0000000000000004271 81.0
DYD1_k127_2009998_3 Amidohydrolase family - - - 0.00000001203 56.0
DYD1_k127_2009998_4 Bacterial antitoxin of ParD toxin-antitoxin type II system and RHH K07746 - - 0.000004038 52.0
DYD1_k127_2015724_0 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase - - - 0.0000000000000000000000000000000000000000000000000000002173 213.0
DYD1_k127_2015724_1 - - - - 0.0000000000000000000000000000000000000000000002037 175.0
DYD1_k127_2015724_2 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) - - - 0.00000000000000000000000000000000001654 153.0
DYD1_k127_2015724_3 Protein of unknown function (DUF3987) - - - 0.000000009261 61.0
DYD1_k127_2015724_4 - - - - 0.0006972 44.0
DYD1_k127_2017803_0 Belongs to the class-II pyridine nucleotide-disulfide oxidoreductase family K00384 - 1.8.1.9 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001088 402.0
DYD1_k127_2017803_1 histidine kinase HAMP region domain protein K07636 - 2.7.13.3 0.00000000000000000000000000000000000000000000000000000000000000000000001009 267.0
DYD1_k127_2017803_2 COG0745 Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain K07657,K07662 - - 0.0000000000000000000000000000000000000000000000000000213 194.0
DYD1_k127_2017803_3 Antioxidant protein with alkyl hydroperoxidase activity. Required for the reduction of the AhpC active site cysteine residues and for the regeneration of the AhpC enzyme activity - - - 0.0000000000000001093 83.0
DYD1_k127_2017803_4 Carboxymuconolactone decarboxylase family - - - 0.00000000000003556 76.0
DYD1_k127_2052796_0 symporter activity K03307 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008284 508.0
DYD1_k127_2052796_1 transferase activity, transferring glycosyl groups K18785 - 2.4.1.319,2.4.1.320 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001735 359.0
DYD1_k127_2052796_10 regulation of lipid metabolic process K17382 GO:0003674,GO:0003824,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005739,GO:0005829,GO:0006508,GO:0006807,GO:0008150,GO:0008152,GO:0008233,GO:0016787,GO:0019216,GO:0019222,GO:0019538,GO:0042802,GO:0043170,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0044238,GO:0044424,GO:0044444,GO:0044464,GO:0050789,GO:0065007,GO:0071704,GO:0080090,GO:0140096,GO:1901564 - 0.0003874 54.0
DYD1_k127_2052796_11 Protein of unknown function DUF58 - - - 0.0007973 53.0
DYD1_k127_2052796_2 xylan catabolic process - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001504 324.0
DYD1_k127_2052796_4 LemA family K03744 - - 0.00000000000000000000000000000000000000000000000000008329 194.0
DYD1_k127_2052796_5 - - - - 0.000000000000000001824 94.0
DYD1_k127_2052796_6 CBS domain - - - 0.0000000000000001059 91.0
DYD1_k127_2052796_7 CBS domain containing protein K04767 - - 0.000000000000001156 87.0
DYD1_k127_2052796_8 PFAM Tetratricopeptide repeat - - - 0.000004097 58.0
DYD1_k127_2052796_9 von Willebrand factor, type A - - - 0.00002932 58.0
DYD1_k127_2078071_0 Multicopper oxidase K22350 - 1.16.3.3 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003269 583.0
DYD1_k127_207868_0 - - - - 0.00000000000000000000000000000000000000000000001074 181.0
DYD1_k127_207868_1 PFAM GCN5-related N-acetyltransferase - - - 0.00000000000000000008614 91.0
DYD1_k127_2087398_0 Protein of unknown function (DUF1552) - - - 4.469e-213 670.0
DYD1_k127_2087398_1 DNA topological change K03168 - 5.99.1.2 0.00000000000000000000000000000000000000000000000000000000000002396 216.0
DYD1_k127_2087860_0 Belongs to the D-alanine--D-alanine ligase family K01921 - 6.3.2.4 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000006543 284.0
DYD1_k127_2087860_1 N-formylglutamate amidohydrolase K01479 - 3.5.3.8 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000263 280.0
DYD1_k127_2087860_2 PFAM Gamma-glutamyltranspeptidase - - - 0.0000000001062 64.0
DYD1_k127_2098802_0 cellulose binding - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000009641 262.0
DYD1_k127_2098802_1 WD40 domain protein beta Propeller K08884,K12132 - 2.7.11.1 0.00000000000000000000000000000000000000000000000000000004696 208.0
DYD1_k127_21106_0 Catalyzes the radical-mediated insertion of two sulfur atoms into the C-6 and C-8 positions of the octanoyl moiety bound to the lipoyl domains of lipoate-dependent enzymes, thereby converting the octanoylated domains into lipoylated derivatives K03644 - 2.8.1.8 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006978 316.0
DYD1_k127_21106_1 intracellular protease K05520 - 3.5.1.124 0.0000000000000000000000000000000000000000000000000000000000000000000000007604 249.0
DYD1_k127_21106_2 COG0589 Universal stress protein UspA and related nucleotide-binding proteins - - - 0.000000000000000000000000000000000000000008159 158.0
DYD1_k127_21106_3 Responsible for the release of ribosomes from messenger RNA at the termination of protein biosynthesis. May increase the efficiency of translation by recycling ribosomes from one round of translation to another K02838 GO:0002181,GO:0002184,GO:0003674,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006412,GO:0006415,GO:0006518,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0016043,GO:0019538,GO:0022411,GO:0032984,GO:0034641,GO:0034645,GO:0043021,GO:0043023,GO:0043043,GO:0043170,GO:0043603,GO:0043604,GO:0043624,GO:0043933,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044424,GO:0044464,GO:0044877,GO:0071704,GO:0071840,GO:1901564,GO:1901566,GO:1901576 - 0.00000000000000000000000000000000000000003363 160.0
DYD1_k127_21106_4 Phosphorylation of dTMP to form dTDP in both de novo and salvage pathways of dTTP synthesis K00943 - 2.7.4.9 0.00000000000000000000000000000000000002571 152.0
DYD1_k127_21106_5 Dehydratase K17865 - 4.2.1.55 0.000000000000000000000000000000000005705 141.0
DYD1_k127_21106_6 COG2812 DNA polymerase III, gamma tau subunits K02341 - 2.7.7.7 0.0000000000000000000000000000000003979 145.0
DYD1_k127_21106_7 Glycosyl transferase, family 2 K01002,K20534 - 2.7.8.20 0.000000000000000000000000000000001635 144.0
DYD1_k127_21106_8 4-amino-4-deoxy-L-arabinose transferase and related glycosyltransferases of PMT family - - - 0.000000000003039 79.0
DYD1_k127_21106_9 - - - - 0.00000000001753 76.0
DYD1_k127_2110741_0 Belongs to the aldehyde dehydrogenase family K00128,K00130,K10217 - 1.2.1.3,1.2.1.32,1.2.1.8,1.2.1.85 1.51e-209 664.0
DYD1_k127_2110741_1 Involved in the import of queuosine (Q) precursors, required for Q precursor salvage K09125 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002313 309.0
DYD1_k127_2110741_2 PFAM Short-chain dehydrogenase reductase SDR K00059 - 1.1.1.100 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000003582 286.0
DYD1_k127_2110741_3 Toxic component of a toxin-antitoxin (TA) module. An RNase - - - 0.0000000000003162 71.0
DYD1_k127_2110741_4 SNF2 Helicase protein - - - 0.00002971 55.0
DYD1_k127_2110741_5 PIN domain - - - 0.0006973 45.0
DYD1_k127_2128049_0 Putative MetA-pathway of phenol degradation - - - 0.00000000000000000000000000000000000000000000000002875 190.0
DYD1_k127_2128049_1 PFAM Pterin 4 alpha carbinolamine dehydratase K01724 - 4.2.1.96 0.00000000000000000000000000000000000000009575 153.0
DYD1_k127_2128049_2 One of the essential components for the initiation of protein synthesis. Stabilizes the binding of IF-2 and IF-3 on the 30S subunit to which N-formylmethionyl-tRNA(fMet) subsequently binds. Helps modulate mRNA selection, yielding the 30S pre- initiation complex (PIC). Upon addition of the 50S ribosomal subunit IF-1, IF-2 and IF-3 are released leaving the mature 70S translation initation complex K02518 - - 0.000000000000000000000002375 103.0
DYD1_k127_2128049_4 4-amino-4-deoxy-L-arabinose transferase activity - - - 0.0000000000008478 81.0
DYD1_k127_2128049_5 transposase activity K07483 - - 0.00000002378 64.0
DYD1_k127_2133255_0 Belongs to the GHMP kinase family. GalK subfamily K00849 - 2.7.1.6 0.000000000000000000000000000000000000000000006241 173.0
DYD1_k127_2133255_1 Belongs to the sodium solute symporter (SSF) (TC 2.A.21) family K03307 - - 0.00000000000000000000000000000000000006389 152.0
DYD1_k127_2142548_0 methionyl-tRNA aminoacylation K01874,K01890,K06878 GO:0003674,GO:0003824,GO:0004812,GO:0004825,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005886,GO:0006082,GO:0006139,GO:0006399,GO:0006412,GO:0006418,GO:0006431,GO:0006518,GO:0006520,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0016020,GO:0016070,GO:0016874,GO:0016875,GO:0019538,GO:0019752,GO:0034641,GO:0034645,GO:0034660,GO:0040007,GO:0043038,GO:0043039,GO:0043043,GO:0043170,GO:0043436,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044281,GO:0044424,GO:0044464,GO:0046483,GO:0071704,GO:0071944,GO:0090304,GO:0140098,GO:0140101,GO:1901360,GO:1901564,GO:1901566,GO:1901576 6.1.1.10,6.1.1.20 0.00000000000000000000000000000004069 130.0
DYD1_k127_2142548_1 Esterase PHB depolymerase - - - 0.0004154 53.0
DYD1_k127_2157888_0 Belongs to the PEP-utilizing enzyme family K01006 - 2.7.9.1 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000272 556.0
DYD1_k127_216950_0 ATPases associated with a variety of cellular activities K06861 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000001837 282.0
DYD1_k127_216950_1 Responsible for synthesis of pseudouridine from uracil K06180 - 5.4.99.23 0.000000000000000000000000000000000000000000000000001302 191.0
DYD1_k127_216950_2 Protein tyrosine kinase K12132 - 2.7.11.1 0.0000000000000000000000000000000000007819 149.0
DYD1_k127_2189602_0 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000006952 278.0
DYD1_k127_2189602_1 cheY-homologous receiver domain - - - 0.000000000000000000000000000000000000000000000000000000647 203.0
DYD1_k127_2190251_0 Glycoside hydrolase family 20 - - - 0.00000000000000000000000000000000006194 141.0
DYD1_k127_2190251_1 PFAM Glycosyl transferase family 2 - - - 0.0000000000000000000000000000009319 129.0
DYD1_k127_2213106_0 Domain of unknown function (DUF4336) - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006494 415.0
DYD1_k127_2227985_0 PFAM Stage II sporulation E family protein K01079,K07315 - 3.1.3.3 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001369 436.0
DYD1_k127_2227985_1 Domain of unknown function (DUF4382) - - - 0.0000000000000000000000000689 120.0
DYD1_k127_2227985_2 5TM C-terminal transporter carbon starvation CstA - - - 0.0000003559 55.0
DYD1_k127_2233993_0 Part of an ABC transporter complex involved in carbohydrate import. Could be involved in ribose, galactose and or methyl galactoside import. Responsible for energy coupling to the transport system K10441 - 3.6.3.17 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004129 353.0
DYD1_k127_2233993_1 Branched-chain amino acid transport system / permease component - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000008946 259.0
DYD1_k127_2233993_2 Anti-anti-sigma regulatory factor (Antagonist of anti-sigma factor) - - - 0.000007901 55.0
DYD1_k127_2250385_0 COG0491 Zn-dependent hydrolases, including glyoxylases - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000001389 300.0
DYD1_k127_2250385_1 Specifically catalyzes the decarboxylation of meso- diaminopimelate (meso-DAP) to L-lysine K01586 - 4.1.1.20 0.0000000000000000000000000000000000000000000000000000000000000000000000000005889 264.0
DYD1_k127_2253739_0 TIGRFAM type IV pilus assembly protein PilM K02662 - - 0.00000000000000000000000000000000000000000000000000000000000000001953 233.0
DYD1_k127_2253739_1 Sodium:solute symporter family - - - 0.00000000000000000000000000000000000000000000000000000008506 200.0
DYD1_k127_2266357_0 Penicillin-binding protein 2 K05515 - 3.4.16.4 0.00000000000000000000000000000000000000000000000000000000002031 231.0
DYD1_k127_2266357_1 rod shape-determining protein MreD K03571 - - 0.00000001124 63.0
DYD1_k127_2266357_2 PBS lyase HEAT domain protein repeat-containing protein - - - 0.0004606 51.0
DYD1_k127_2268963_0 Part of the outer membrane protein assembly complex, which is involved in assembly and insertion of beta-barrel proteins into the outer membrane K07277 - - 1.784e-284 893.0
DYD1_k127_2268963_1 zinc metalloprotease K11749 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000763 408.0
DYD1_k127_2268963_2 peptidase S1 and S6, chymotrypsin Hap - - - 0.0000000000000000000000000002931 117.0
DYD1_k127_2268963_3 COG2825 Outer membrane protein - - - 0.0000000000000000000000009728 111.0
DYD1_k127_2268963_4 Catalyzes the NADP-dependent rearrangement and reduction of 1-deoxy-D-xylulose-5-phosphate (DXP) to 2-C-methyl-D-erythritol 4-phosphate (MEP) K00099 - 1.1.1.267 0.00000000005365 65.0
DYD1_k127_2268963_5 Catalyzes the N-acylation of UDP-3-O-acylglucosamine using 3-hydroxyacyl-ACP as the acyl donor. Is involved in the biosynthesis of lipid A, a phosphorylated glycolipid that anchors the lipopolysaccharide to the outer membrane of the cell K02536 - 2.3.1.191 0.00001275 47.0
DYD1_k127_2322462_0 TIGRFAM Polyketide-type polyunsaturated fatty acid synthase, PfaA - - - 0.0 1154.0
DYD1_k127_2322462_1 TIGRFAM PfaD family protein - - - 1.254e-204 655.0
DYD1_k127_2322462_2 Catalyzes the reversible conversion of 2- phosphoglycerate into phosphoenolpyruvate. It is essential for the degradation of carbohydrates via glycolysis K01689 - 4.2.1.11 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006576 579.0
DYD1_k127_2322462_3 Catalyzes the conversion of 1-hydroxy-2-methyl-2-(E)- butenyl 4-diphosphate (HMBPP) into a mixture of isopentenyl diphosphate (IPP) and dimethylallyl diphosphate (DMAPP). Acts in the terminal step of the DOXP MEP pathway for isoprenoid precursor biosynthesis K03527 - 1.17.7.4 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001747 350.0
DYD1_k127_2322462_4 PFAM ABC transporter K06158 - - 0.000000000000005897 76.0
DYD1_k127_2322556_0 Thrombospondin 4 K04659,K16857 GO:0000902,GO:0001932,GO:0001934,GO:0001936,GO:0001938,GO:0001968,GO:0002682,GO:0002684,GO:0002685,GO:0002687,GO:0002688,GO:0002690,GO:0003674,GO:0005102,GO:0005178,GO:0005488,GO:0005509,GO:0005515,GO:0005518,GO:0005539,GO:0005575,GO:0005576,GO:0005604,GO:0005615,GO:0005622,GO:0005623,GO:0005737,GO:0005783,GO:0005912,GO:0005924,GO:0005927,GO:0006928,GO:0006950,GO:0007155,GO:0007275,GO:0007399,GO:0007517,GO:0007610,GO:0008150,GO:0008201,GO:0008284,GO:0009653,GO:0009888,GO:0009893,GO:0009987,GO:0010562,GO:0010604,GO:0012505,GO:0014812,GO:0016043,GO:0016203,GO:0016477,GO:0016525,GO:0016528,GO:0016529,GO:0019220,GO:0019222,GO:0022008,GO:0022603,GO:0022607,GO:0022610,GO:0030030,GO:0030054,GO:0030055,GO:0030154,GO:0030182,GO:0030334,GO:0030335,GO:0031012,GO:0031175,GO:0031323,GO:0031325,GO:0031399,GO:0031401,GO:0031594,GO:0032101,GO:0032103,GO:0032268,GO:0032270,GO:0032501,GO:0032502,GO:0032879,GO:0032989,GO:0032990,GO:0032991,GO:0033554,GO:0033555,GO:0033627,GO:0034103,GO:0034976,GO:0035989,GO:0040011,GO:0040012,GO:0040017,GO:0042127,GO:0042325,GO:0042327,GO:0043167,GO:0043168,GO:0043169,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0043236,GO:0043237,GO:0043933,GO:0044085,GO:0044421,GO:0044424,GO:0044444,GO:0044464,GO:0044877,GO:0045202,GO:0045765,GO:0045937,GO:0046872,GO:0048265,GO:0048266,GO:0048468,GO:0048513,GO:0048518,GO:0048519,GO:0048522,GO:0048583,GO:0048584,GO:0048666,GO:0048699,GO:0048731,GO:0048812,GO:0048856,GO:0048858,GO:0048869,GO:0048870,GO:0050678,GO:0050679,GO:0050730,GO:0050731,GO:0050789,GO:0050793,GO:0050794,GO:0050839,GO:0050840,GO:0050896,GO:0050920,GO:0050921,GO:0051093,GO:0051171,GO:0051173,GO:0051174,GO:0051179,GO:0051239,GO:0051241,GO:0051246,GO:0051247,GO:0051259,GO:0051260,GO:0051270,GO:0051272,GO:0051451,GO:0051674,GO:0051716,GO:0060255,GO:0060538,GO:0061061,GO:0061448,GO:0062023,GO:0065003,GO:0065007,GO:0070161,GO:0071603,GO:0071622,GO:0071624,GO:0071840,GO:0080090,GO:0090022,GO:0090023,GO:0090136,GO:0097367,GO:0098609,GO:0120036,GO:0120039,GO:1901342,GO:1901343,GO:1901681,GO:1902622,GO:1902624,GO:2000026,GO:2000145,GO:2000147,GO:2000181 - 0.000000009025 69.0
DYD1_k127_2322556_1 Belongs to the peptidase S8 family - - - 0.0002498 54.0
DYD1_k127_2323055_0 Cytochrome C oxidase, mono-heme subunit/FixO K00405,K01153,K09760,K12132 - 2.7.11.1,3.1.21.3 0.00000000000000000000000000000000000000000003293 186.0
DYD1_k127_2325387_0 COG1668 ABC-type Na efflux pump, permease component K01992,K09696 - - 0.00000000000000000000000000000000000000000000000000000000000000000001172 262.0
DYD1_k127_2325387_1 One of the primary rRNA binding proteins. Required for association of the 30S and 50S subunits to form the 70S ribosome, for tRNA binding and peptide bond formation. It has been suggested to have peptidyltransferase activity K02886 GO:0002181,GO:0003674,GO:0003676,GO:0003723,GO:0003735,GO:0005198,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0006412,GO:0006518,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0015934,GO:0019538,GO:0022625,GO:0022626,GO:0032991,GO:0034641,GO:0034645,GO:0043043,GO:0043170,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:0071704,GO:0097159,GO:1901363,GO:1901564,GO:1901566,GO:1901576,GO:1990904 - 0.00000000000003426 80.0
DYD1_k127_2325387_2 COG1131 ABC-type multidrug transport system ATPase component K01990,K09697 - 3.6.3.7 0.0000000000005727 72.0
DYD1_k127_2333425_0 Catalyzes the GTP-dependent ribosomal translocation step during translation elongation. During this step, the ribosome changes from the pre-translocational (PRE) to the post- translocational (POST) state as the newly formed A-site-bound peptidyl-tRNA and P-site-bound deacylated tRNA move to the P and E sites, respectively. Catalyzes the coordinated movement of the two tRNA molecules, the mRNA and conformational changes in the ribosome K02355 GO:0003674,GO:0003676,GO:0003723,GO:0003746,GO:0003824,GO:0003924,GO:0005488,GO:0006412,GO:0006414,GO:0006518,GO:0006807,GO:0008135,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0016462,GO:0016787,GO:0016817,GO:0016818,GO:0017111,GO:0019538,GO:0034641,GO:0034645,GO:0043043,GO:0043170,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0071704,GO:0097159,GO:1901363,GO:1901564,GO:1901566,GO:1901576 - 2.186e-284 891.0
DYD1_k127_2333425_1 PIN domain - - - 0.0000000000000000000000000000000000002615 145.0
DYD1_k127_2333425_2 with chaperone activity ATP-binding K03696 - - 0.0000000000000000000000000000000000003478 150.0
DYD1_k127_2333425_3 AAA ATPase domain - - - 0.0000000000000000000000002434 112.0
DYD1_k127_2333425_4 Gamma-glutamyltransferase K00681 - 2.3.2.2,3.4.19.13 0.000000000000000003646 86.0
DYD1_k127_2346343_0 PFAM Peptidase M16 inactive domain - - - 0.0000000000000000000000000000000000000000000001148 182.0
DYD1_k127_2346658_0 Molybdopterin oxidoreductase - - - 0.0 1237.0
DYD1_k127_2371673_0 Catalyzes the GTP-dependent ribosomal translocation step during translation elongation. During this step, the ribosome changes from the pre-translocational (PRE) to the post- translocational (POST) state as the newly formed A-site-bound peptidyl-tRNA and P-site-bound deacylated tRNA move to the P and E sites, respectively. Catalyzes the coordinated movement of the two tRNA molecules, the mRNA and conformational changes in the ribosome K02355 - - 2.233e-226 721.0
DYD1_k127_2371673_1 One of the primary rRNA binding proteins, it binds directly near the 3'-end of the 23S rRNA, where it nucleates assembly of the 50S subunit K02906 - - 0.00000000000000000000000000000000000000000000000000000000009831 211.0
DYD1_k127_2371673_2 Involved in the binding of tRNA to the ribosomes K02946 GO:0003674,GO:0003735,GO:0005198,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005840,GO:0006412,GO:0006518,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0015935,GO:0019538,GO:0032991,GO:0034641,GO:0034645,GO:0043043,GO:0043170,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044446,GO:0044464,GO:0071704,GO:1901564,GO:1901566,GO:1901576,GO:1990904 - 0.00000000000000000000000000000000000000000006454 163.0
DYD1_k127_2371673_3 Forms part of the polypeptide exit tunnel K02926 GO:0003674,GO:0003676,GO:0003723,GO:0003735,GO:0005198,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0006412,GO:0006518,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0019538,GO:0022626,GO:0032991,GO:0034641,GO:0034645,GO:0043043,GO:0043170,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044424,GO:0044444,GO:0044445,GO:0044464,GO:0071704,GO:0097159,GO:1901363,GO:1901564,GO:1901566,GO:1901576,GO:1990904 - 0.000000000000000000000000000000000000002129 154.0
DYD1_k127_2371673_4 One of the early assembly proteins it binds 23S rRNA. One of the proteins that surrounds the polypeptide exit tunnel on the outside of the ribosome. Forms the main docking site for trigger factor binding to the ribosome K02892 GO:0000027,GO:0003674,GO:0003676,GO:0003723,GO:0003735,GO:0005198,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0006412,GO:0006518,GO:0006807,GO:0006996,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0015934,GO:0016043,GO:0019538,GO:0022607,GO:0022613,GO:0022618,GO:0022625,GO:0022626,GO:0032991,GO:0034622,GO:0034641,GO:0034645,GO:0042254,GO:0042255,GO:0042273,GO:0043043,GO:0043170,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043603,GO:0043604,GO:0043933,GO:0044085,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:0065003,GO:0070925,GO:0071704,GO:0071826,GO:0071840,GO:0097159,GO:1901363,GO:1901564,GO:1901566,GO:1901576,GO:1990904 - 0.00000000000000000001106 95.0
DYD1_k127_2375848_0 PFAM Stage II sporulation protein E (SpoIIE) K07315 - 3.1.3.3 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002058 535.0
DYD1_k127_2375848_1 PFAM ABC transporter related K06158 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002851 388.0
DYD1_k127_2375848_2 Large extracellular alpha-helical protein K06894 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003917 354.0
DYD1_k127_2375848_3 HDOD domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000001009 259.0
DYD1_k127_2375848_4 Domain of unknown function (DUF4286) - - - 0.000002187 55.0
DYD1_k127_2381214_0 Catalyzes the anti-1,4-elimination of the C-3 phosphate and the C-6 proR hydrogen from 5-enolpyruvylshikimate-3-phosphate (EPSP) to yield chorismate, which is the branch point compound that serves as the starting substrate for the three terminal pathways of aromatic amino acid biosynthesis. This reaction introduces a second double bond into the aromatic ring system K01736 GO:0000166,GO:0003674,GO:0003824,GO:0004107,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006082,GO:0006520,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0008652,GO:0009058,GO:0009072,GO:0009073,GO:0009423,GO:0009987,GO:0010181,GO:0016053,GO:0016829,GO:0016835,GO:0016838,GO:0019438,GO:0019752,GO:0032553,GO:0036094,GO:0043167,GO:0043168,GO:0043436,GO:0043648,GO:0043650,GO:0044237,GO:0044238,GO:0044249,GO:0044281,GO:0044283,GO:0044424,GO:0044444,GO:0044464,GO:0046394,GO:0046417,GO:0048037,GO:0050662,GO:0071704,GO:0097159,GO:0097367,GO:1901265,GO:1901360,GO:1901362,GO:1901363,GO:1901564,GO:1901566,GO:1901576 4.2.3.5 0.000000000000000000000001083 105.0
DYD1_k127_2385237_0 - - - - 0.00000000000000008128 86.0
DYD1_k127_2385237_1 Putative Flp pilus-assembly TadE/G-like - - - 0.000000003122 69.0
DYD1_k127_2385858_0 DNA topoisomerase II activity K03167 - 5.99.1.3 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002109 572.0
DYD1_k127_2385858_1 Presumably involved in the processing and regular turnover of intracellular proteins. Catalyzes the removal of unsubstituted N-terminal amino acids from various peptides K01255 - 3.4.11.1 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001691 375.0
DYD1_k127_2385858_2 Tetratricopeptide repeat - - - 0.000000000000000000005013 108.0
DYD1_k127_2385858_3 HEPN domain - - - 0.00000000000000000002916 96.0
DYD1_k127_2385858_4 - - - - 0.0000000000000000001802 94.0
DYD1_k127_2385858_5 Tetratricopeptide repeat - - - 0.000000002579 69.0
DYD1_k127_2396749_0 PFAM Type II secretion system protein E K02454,K02652 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000698 442.0
DYD1_k127_2396749_1 Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family K03296 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000002327 299.0
DYD1_k127_2396749_2 MSHA biogenesis protein MshG K12278 - - 0.00000000000000000000000000000000000000000000000000008118 202.0
DYD1_k127_2396749_3 RuBisCO catalyzes two reactions the carboxylation of D- ribulose 1,5-bisphosphate, the primary event in carbon dioxide fixation, as well as the oxidative fragmentation of the pentose substrate. Both reactions occur simultaneously and in competition at the same active site K01601 - 4.1.1.39 0.0000000000000000000000009065 104.0
DYD1_k127_2396749_4 Type II secretory pathway, pseudopilin PulG K10924 - - 0.000004263 55.0
DYD1_k127_239752_0 Responsible for synthesis of pseudouridine from uracil- 55 in the psi GC loop of transfer RNAs K03177 GO:0001522,GO:0003674,GO:0003824,GO:0006139,GO:0006396,GO:0006399,GO:0006400,GO:0006725,GO:0006807,GO:0008033,GO:0008150,GO:0008152,GO:0009451,GO:0009982,GO:0009987,GO:0010467,GO:0016070,GO:0016071,GO:0016556,GO:0016853,GO:0016866,GO:0034470,GO:0034641,GO:0034660,GO:0043170,GO:0043412,GO:0044237,GO:0044238,GO:0046483,GO:0071704,GO:0090304,GO:1901360,GO:1990481 5.4.99.25 0.00000000000000000000000000000000000000000000000000000000002838 214.0
DYD1_k127_239752_1 sequence-specific DNA binding K07726 - - 0.000000000000000000000000001143 115.0
DYD1_k127_239752_2 Cytotoxic translational repressor of toxin-antitoxin stability system - - - 0.00000000000000000000000006705 113.0
DYD1_k127_239752_3 Sigma-70 region 3 K03090 - - 0.0003351 51.0
DYD1_k127_2401831_0 CAAX protease self-immunity K07052 - - 0.000207 52.0
DYD1_k127_2408613_0 amino acid transport K02030 - - 0.000000000000000000000000000000000000000000000000000000008299 207.0
DYD1_k127_2408613_1 ABC transporter, ATP-binding protein K02028 - 3.6.3.21 0.0000000000000000000000000000000000000000000000000000008365 195.0
DYD1_k127_2408613_2 ABC transporter, permease protein K02029,K10040,K16962 - - 0.00000000000000000000000000000000000000000000007815 178.0
DYD1_k127_2408613_3 COG0765 ABC-type amino acid transport system, permease component K02029,K10002 - - 0.000000000000000000008783 95.0
DYD1_k127_2440737_0 AcrB/AcrD/AcrF family K03296 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002331 469.0
DYD1_k127_2440737_1 Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family - - - 0.000000000000000000000000000000000002775 154.0
DYD1_k127_2443980_0 Radical SAM superfamily K04069 - 1.97.1.4 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006791 454.0
DYD1_k127_2443980_1 Belongs to the ATP-dependent AMP-binding enzyme family - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001089 405.0
DYD1_k127_2443980_2 Prolyl oligopeptidase family K06889 - - 0.0000000000000000000000004052 115.0
DYD1_k127_2443980_3 Phosphopantetheine attachment site - - - 0.0000007005 54.0
DYD1_k127_2445091_0 Domain present in PSD-95, Dlg, and ZO-1/2. K04771 - 3.4.21.107 0.0000000000000000000000000000000000000000000000000000000000000000000000000000007607 284.0
DYD1_k127_2445091_1 Type I phosphodiesterase / nucleotide pyrophosphatase - - - 0.000000000000000000000000000000000000000001375 160.0
DYD1_k127_2445091_2 - - - - 0.0000000000000000000000000000000000007819 149.0
DYD1_k127_2445091_3 it binds specifically double-stranded DNA at a 9 bp consensus (dnaA box) 5'-TTATC CA A CA A-3'. DnaA binds to ATP and to acidic phospholipids K02313 - - 0.0000000009938 63.0
DYD1_k127_2445091_4 - - - - 0.0000009008 53.0
DYD1_k127_2451993_0 glyoxalase III activity - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003061 340.0
DYD1_k127_2451993_1 Transcriptional regulator - - - 0.0000000000000000000000000000000000007115 141.0
DYD1_k127_2453691_0 Belongs to the MT-A70-like family - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000001403 293.0
DYD1_k127_2453691_1 Modulates transcription in response to changes in cellular NADH NAD( ) redox state K01926 - - 0.00000000000000000000000000000000000000000001357 168.0
DYD1_k127_2460310_0 Involved in the biosynthesis of branched-chain amino acids (BCAA). Catalyzes an alkyl-migration followed by a ketol- acid reduction of (S)-2-acetolactate (S2AL) to yield (R)-2,3- dihydroxy-isovalerate. In the isomerase reaction, S2AL is rearranged via a Mg-dependent methyl migration to produce 3- hydroxy-3-methyl-2-ketobutyrate (HMKB). In the reductase reaction, this 2-ketoacid undergoes a metal-dependent reduction by NADPH to yield (R)-2,3-dihydroxy-isovalerate K00053 - 1.1.1.86 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001966 364.0
DYD1_k127_2460310_1 Type II secretory pathway component PulF K02653 - - 0.00002238 55.0
DYD1_k127_2460310_2 Sel1-like repeats. K14026 - - 0.0002643 43.0
DYD1_k127_2464027_0 PBP superfamily domain K02040 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002863 496.0
DYD1_k127_2464027_1 Belongs to the low molecular weight phosphotyrosine protein phosphatase family K03741 - 1.20.4.1 0.00000000000000000000000000000000000000001217 154.0
DYD1_k127_2464027_2 probably responsible for the translocation of the substrate across the membrane K02037 - - 0.00002242 48.0
DYD1_k127_2465938_0 Oxygen tolerance - - - 0.0000000000000000000000000000000000000000000000000013 204.0
DYD1_k127_2493240_0 Protein tyrosine kinase K12132 - 2.7.11.1 0.0000000000000000000000000000002256 143.0
DYD1_k127_2502537_0 Isochorismatase family - - - 0.0000000000000000000000000000000000000000000000000000004023 194.0
DYD1_k127_2502537_1 isoleucine patch - - - 0.000000000000000000000000000000000000001142 156.0
DYD1_k127_2514721_0 PFAM C-5 cytosine-specific DNA methylase K00558 - 2.1.1.37 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006197 424.0
DYD1_k127_2514721_1 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase - - - 0.0000000000000000000000000000000000002825 144.0
DYD1_k127_2518771_0 Polysaccharide biosynthesis protein - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001171 437.0
DYD1_k127_2518771_1 Catalyzes the decarboxylative condensation of pimeloyl- acyl-carrier protein and L-alanine to produce 8-amino-7- oxononanoate (AON), acyl-carrier protein , and carbon dioxide K00639 - 2.3.1.29 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000001189 297.0
DYD1_k127_2519767_0 TIGRFAM asparagine synthase (glutamine-hydrolyzing) K01953 - 6.3.5.4 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001196 381.0
DYD1_k127_2519767_1 Two component transcriptional regulator, Winged helix family - - - 0.000000000000000000000000000000000000000000000000000000000000000000000002878 251.0
DYD1_k127_2519767_2 Glycosyltransferase Family 4 - - - 0.00000000000000000000000000001248 134.0
DYD1_k127_2519767_3 Glycosyl transferase 4-like domain - - - 0.000000000000000000000000001865 127.0
DYD1_k127_2519767_5 PFAM Uncharacterised protein family UPF0150 - - - 0.000000000000003308 79.0
DYD1_k127_2519767_6 Putative beta-lactamase-inhibitor-like, PepSY-like - - - 0.0000001006 62.0
DYD1_k127_2519767_7 HicA toxin of bacterial toxin-antitoxin, - - - 0.0001859 46.0
DYD1_k127_2532557_0 KaiC K08482 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002783 467.0
DYD1_k127_2532557_1 HWE histidine kinase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000006576 274.0
DYD1_k127_2532557_2 His Kinase A (phosphoacceptor) domain - - - 0.000000000000002916 89.0
DYD1_k127_2556011_0 Conserved hypothetical protein 698 - - - 0.00000000000000000000000000000000000000000000001429 187.0
DYD1_k127_2556011_1 Cysteine dioxygenase type I K00456 - 1.13.11.20 0.000000000000000000000000000000001758 139.0
DYD1_k127_2556011_2 Tetratricopeptide repeat - - - 0.0000000000001573 74.0
DYD1_k127_2556011_3 HEAT repeat - - - 0.0000000002706 72.0
DYD1_k127_2561077_0 Glycosyl hydrolases family 31 K01187 - 3.2.1.20 4.185e-207 665.0
DYD1_k127_2561077_1 Belongs to the glycosyl hydrolase 5 (cellulase A) family K01179,K13276 - 3.2.1.4 0.00000000000004212 76.0
DYD1_k127_2576357_0 PFAM Tetratricopeptide repeat - - - 0.0000000000000000000000000000001232 143.0
DYD1_k127_2576357_1 Nucleotidase that shows phosphatase activity on nucleoside 5'-monophosphates K03787 - 3.1.3.5 0.00000000000000000004369 92.0
DYD1_k127_2576357_2 Tetratricopeptide repeat - - - 0.0000000005468 67.0
DYD1_k127_2579262_0 Peptidase family M49 - - - 1.234e-216 685.0
DYD1_k127_2579262_1 phosphinothricin N-acetyltransferase activity K03823 - 2.3.1.183 0.0000000000000000000000000000000000000000000000000000000000002161 217.0
DYD1_k127_2579262_2 ASPIC and UnbV - - - 0.000000000000000000000000000000000000000000000000000000000376 219.0
DYD1_k127_2579262_3 4Fe-4S binding domain - - - 0.00000000000000002491 96.0
DYD1_k127_2579262_4 Catalyzes the transfer of a formyl group from 10- formyltetrahydrofolate to 5-phospho-ribosyl-glycinamide (GAR), producing 5-phospho-ribosyl-N-formylglycinamide (FGAR) and tetrahydrofolate K11175 - 2.1.2.2 0.000000000000007962 79.0
DYD1_k127_2579262_5 general secretion pathway protein - - - 0.0000005991 61.0
DYD1_k127_2597375_0 4-amino-4-deoxy-L-arabinose transferase and related glycosyltransferases of PMT family - - - 0.00000000000000000000000000000000000000001031 173.0
DYD1_k127_2618719_0 COG0210 Superfamily I DNA and RNA K03657 - 3.6.4.12 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002355 609.0
DYD1_k127_2618719_1 Nucleotidyl transferase K00971 - 2.7.7.13 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006478 321.0
DYD1_k127_2618719_2 Could be a nuclease involved in processing of the 5'-end of pre-16S rRNA K07447 - - 0.0000000000000000000000000007224 119.0
DYD1_k127_2618719_3 aminopeptidase activity - - - 0.00000000000000000000000534 109.0
DYD1_k127_2618719_4 PFAM PEGA domain - - - 0.000000000000000000009735 98.0
DYD1_k127_2623842_0 hydrolase activity, hydrolyzing O-glycosyl compounds K01208 - 3.2.1.133,3.2.1.135,3.2.1.54 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007747 614.0
DYD1_k127_2623842_1 Periplasmic binding protein LacI transcriptional regulator K02529,K03484 - - 0.0000000000000000000000000000000000000000000000000000006555 206.0
DYD1_k127_2623842_2 Bacterial extracellular solute-binding protein K02027 - - 0.00000000000000000000001244 111.0
DYD1_k127_2623842_3 best DB hits PFAM PF00114 - - - 0.000000000000002286 86.0
DYD1_k127_2623842_4 Metallo-peptidase family M12B Reprolysin-like - - - 0.0000003888 64.0
DYD1_k127_2645996_0 ATPase related to the helicase subunit of the Holliday junction resolvase K07478 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009545 539.0
DYD1_k127_2645996_1 Belongs to the succinate dehydrogenase fumarate reductase iron-sulfur protein family K00207,K12527,K17723 - 1.3.1.1,1.3.1.2,1.97.1.9 0.0000000000000000000000000000000000000000004249 162.0
DYD1_k127_2645996_2 Repeat domain in Vibrio, Colwellia, Bradyrhizobium and Shewanella - - - 0.0000008419 62.0
DYD1_k127_2648190_0 transposase IS116 IS110 IS902 family - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008379 496.0
DYD1_k127_2648190_1 alpha/beta hydrolase fold - - - 0.000000000003363 71.0
DYD1_k127_2664589_0 Prevents misfolding and promotes the refolding and proper assembly of unfolded polypeptides generated under stress conditions - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006534 607.0
DYD1_k127_2664589_1 Catalyzes the conversion of (8S)-3',8-cyclo-7,8- dihydroguanosine 5'-triphosphate to cyclic pyranopterin monophosphate (cPMP) K03637 GO:0003674,GO:0003824,GO:0005488,GO:0005515,GO:0006732,GO:0006777,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009108,GO:0009987,GO:0016043,GO:0016829,GO:0016849,GO:0018130,GO:0019538,GO:0019637,GO:0019720,GO:0022607,GO:0034214,GO:0042802,GO:0043170,GO:0043545,GO:0043933,GO:0044085,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0046483,GO:0051186,GO:0051188,GO:0051189,GO:0051259,GO:0061799,GO:0065003,GO:0071704,GO:0071840,GO:0090407,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576 4.6.1.17 0.000000000000000000000000000000000000000000000003158 179.0
DYD1_k127_2664589_2 Peptidase family M48 K06013 - 3.4.24.84 0.0000000000000000000000000000000000000000000001765 187.0
DYD1_k127_2664589_3 3-hydroxyanthranilate 3,4-dioxygenase activity - - - 0.000000000000000000000000000000000000000000003001 168.0
DYD1_k127_2671048_0 Type 4 fimbrial assembly protein pilC K02653 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009021 340.0
DYD1_k127_2671048_1 COG1024 Enoyl-CoA hydratase carnithine racemase K13766 - 4.2.1.18 0.00000000000000000000000000000000000000000000000000000000000000000000000000004781 267.0
DYD1_k127_2671048_2 Belongs to the LOG family K06966 - 3.2.2.10 0.0000000000000000000000000000000000000000000000000000000000000000001228 241.0
DYD1_k127_2671048_3 TIGRFAM haloacid dehalogenase superfamily, subfamily IA, variant 3 with third motif having DD or ED K01838 - 5.4.2.6 0.00000000000000000000000000000000000000000000001505 182.0
DYD1_k127_2671048_4 Catalyzes the isomerization of sedoheptulose 7-phosphate in D-glycero-D-manno-heptose 7-phosphate K03271 - 5.3.1.28 0.0000000000000000000000000000000000000000000002469 174.0
DYD1_k127_2671048_5 - - - - 0.000000000000002245 86.0
DYD1_k127_2671048_6 Pfam:N_methyl_2 - - - 0.0000002443 64.0
DYD1_k127_2671048_7 Condensin II complex subunit CAP-H2 or CNDH2, C-term K11490 - - 0.0007364 48.0
DYD1_k127_267616_0 Specifically methylates position 2 of adenine 2503 in 23S rRNA and position 2 of adenine 37 in tRNAs K06941 GO:0000154,GO:0001510,GO:0003674,GO:0003824,GO:0006139,GO:0006364,GO:0006396,GO:0006399,GO:0006400,GO:0006725,GO:0006807,GO:0008033,GO:0008150,GO:0008152,GO:0008168,GO:0008173,GO:0008175,GO:0008649,GO:0008757,GO:0009451,GO:0009987,GO:0010467,GO:0016070,GO:0016072,GO:0016740,GO:0016741,GO:0022613,GO:0030488,GO:0031167,GO:0032259,GO:0034470,GO:0034641,GO:0034660,GO:0042254,GO:0043170,GO:0043412,GO:0043414,GO:0044085,GO:0044237,GO:0044238,GO:0044260,GO:0046483,GO:0070475,GO:0071704,GO:0071840,GO:0090304,GO:0140098,GO:0140101,GO:0140102,GO:1901360 2.1.1.192 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003396 345.0
DYD1_k127_267616_1 Catalyzes the reversible phosphorylation of UMP to UDP K09903 - 2.7.4.22 0.00000000000000000000000000000000000000000000000000000000000000000000000000004396 265.0
DYD1_k127_267616_2 Ligates lysine onto the cytidine present at position 34 of the AUA codon-specific tRNA(Ile) that contains the anticodon CAU, in an ATP-dependent manner. Cytidine is converted to lysidine, thus changing the amino acid specificity of the tRNA from methionine to isoleucine K04075 - 6.3.4.19 0.0000000000000000000000000000000000000000000001572 181.0
DYD1_k127_267616_3 Protein involved in outer membrane biogenesis - - - 0.0000000000000000000000000000000003196 154.0
DYD1_k127_267616_4 4-amino-4-deoxy-L-arabinose transferase and related glycosyltransferases of PMT family - - - 0.000000000000000000000000000002136 136.0
DYD1_k127_267616_5 Transposase - - - 0.000000000000000000176 88.0
DYD1_k127_267616_6 Associates with the EF-Tu.GDP complex and induces the exchange of GDP to GTP. It remains bound to the aminoacyl-tRNA.EF- Tu.GTP complex up to the GTP hydrolysis stage on the ribosome K02357 GO:0003674,GO:0003676,GO:0003723,GO:0003746,GO:0005488,GO:0006412,GO:0006414,GO:0006518,GO:0006807,GO:0008135,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0019538,GO:0034641,GO:0034645,GO:0043043,GO:0043170,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0071704,GO:0097159,GO:1901363,GO:1901564,GO:1901566,GO:1901576 - 0.000000000000003141 78.0
DYD1_k127_2690595_0 PFAM conserved K07027 - - 0.00000000006457 74.0
DYD1_k127_2690595_2 Dolichyl-phosphate-mannose-protein mannosyltransferase - - - 0.00008059 56.0
DYD1_k127_2692874_0 Tetratricopeptide repeat - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000004908 283.0
DYD1_k127_2692874_1 Stress-responsive transcriptional regulator K03973 - - 0.0000000000000005129 80.0
DYD1_k127_2692874_2 - - - - 0.0005415 49.0
DYD1_k127_2703331_0 Amidohydrolase family - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001078 514.0
DYD1_k127_2703331_1 Amidohydrolase family - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004615 469.0
DYD1_k127_2703331_2 Trypsin - - - 0.00001126 49.0
DYD1_k127_2711336_0 protein kinase related protein - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005969 346.0
DYD1_k127_2728371_0 Synthesizes selenophosphate from selenide and ATP K01008 - 2.7.9.3 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001371 308.0
DYD1_k127_2728371_1 serine threonine protein kinase K08884,K12132 - 2.7.11.1 0.00000000000000000000000000000000000000000000000000000000000000000000000002411 279.0
DYD1_k127_2728371_2 Belongs to the GSP D family K02280 - - 0.00000000000000000000000000000000000000000000000000000000000000000008312 256.0
DYD1_k127_2728371_3 4-amino-4-deoxy-L-arabinose transferase and related glycosyltransferases of PMT family - - - 0.0000000000000000000000000000000000000000000000000000000000000001013 242.0
DYD1_k127_2728371_4 carboxylic ester hydrolase activity - - - 0.0000000000000000000000000000000000000000000000001505 193.0
DYD1_k127_2728371_5 Bacteriocin-protection, YdeI or OmpD-Associated - - - 0.00000000000000000000001911 102.0
DYD1_k127_2728371_6 4Fe-4S iron sulfur cluster binding proteins, NifH/frxC family K02282 - - 0.0000000000000000003288 100.0
DYD1_k127_2728371_7 carboxylic ester hydrolase activity - - - 0.000000000000003795 85.0
DYD1_k127_2728371_8 - - - - 0.000004414 59.0
DYD1_k127_2733532_0 Proprotein convertase P-domain - - - 0.000006087 59.0
DYD1_k127_2743134_0 Protein tyrosine kinase K12132 - 2.7.11.1 0.00000000000000000000000000000000000000000000000000000000000000000000000000000002169 284.0
DYD1_k127_2743134_1 PFAM Uracil-DNA glycosylase superfamily K10800 - - 0.0000000000000000000000000000000000000000000000000000002947 196.0
DYD1_k127_2743134_2 amine dehydrogenase activity K01173 - - 0.00000000000000000000000000000561 139.0
DYD1_k127_2743134_3 Sigma-70, region 4 K03088 - - 0.00000000000000004032 89.0
DYD1_k127_275014_0 Biotin-lipoyl like - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002169 437.0
DYD1_k127_275014_1 PFAM ABC transporter related K02003 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001358 353.0
DYD1_k127_275014_2 hydrolase activity, hydrolyzing N-glycosyl compounds - - - 0.0000000000000000000000000000000000000000000000000000000000001216 219.0
DYD1_k127_275014_3 MacB-like periplasmic core domain - - - 0.0000000000967 65.0
DYD1_k127_275014_4 Transcription factor zinc-finger K09981 - - 0.0000004957 57.0
DYD1_k127_2761475_0 D-fructose-1,6-bisphosphate 1-phosphohydrolase class 1 K03841 - 3.1.3.11 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001164 396.0
DYD1_k127_2761475_1 Peptide chain release factor 1 directs the termination of translation in response to the peptide chain termination codons UAG and UAA K02835 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000274 306.0
DYD1_k127_2761475_2 NUDIX domain K01515 - 3.6.1.13 0.000000000000000000000000000000001532 137.0
DYD1_k127_2761475_3 Binds the 23S rRNA K02909 - - 0.0000000000000000000000000002356 116.0
DYD1_k127_2761475_4 PFAM Peptidase family M50 - - - 0.00000000000000000001206 101.0
DYD1_k127_2761837_0 ATPases associated with a variety of cellular activities K02049 - - 0.000000000000000000000000000000000000000000000000000002357 197.0
DYD1_k127_2761837_1 Catalyzes the conversion of feruloyl-CoA to vanillin and acetyl-CoA - - - 0.0000000000000000000000000002574 125.0
DYD1_k127_2780359_0 Catalyzes the methylthiolation of N6- (dimethylallyl)adenosine (i(6)A), leading to the formation of 2- methylthio-N6-(dimethylallyl)adenosine (ms(2)i(6)A) at position 37 in tRNAs that read codons beginning with uridine K06168 - 2.8.4.3 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003092 417.0
DYD1_k127_2780359_1 Type II/IV secretion system protein K02669 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000005677 294.0
DYD1_k127_2780359_2 Type II and III secretion system protein K02666 - - 0.000000000000000000000000000000002109 148.0
DYD1_k127_2780359_3 HDOD domain - - - 0.000000000000000000000002681 114.0
DYD1_k127_2780359_4 Polymer-forming cytoskeletal - - - 0.0000000000000000004135 93.0
DYD1_k127_2780359_5 Pilus assembly protein K02662 - - 0.000003177 60.0
DYD1_k127_2780359_7 Spermine/spermidine synthase domain - - - 0.0006281 49.0
DYD1_k127_27852_0 cystathionine gamma-synthase activity K01758,K01760,K01761 - 4.4.1.1,4.4.1.11,4.4.1.8 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001083 399.0
DYD1_k127_27852_1 TIGRFAM glutamine amidotransferase of anthranilate synthase K01658 - 4.1.3.27 0.0000000000000000000000000000000000000000000000000000000000000000000000000003808 263.0
DYD1_k127_27852_2 TIGRFAM 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase, YrbI family K03270 - 3.1.3.45 0.0000000000000000000000000000000000000003228 154.0
DYD1_k127_2791063_0 amino acids such as valine, to avoid such errors it has two additional distinct tRNA(Ile)-dependent editing activities. One activity is designated as 'pretransfer' editing and involves the hydrolysis of activated Val-AMP. The other activity is designated 'posttransfer' editing and involves deacylation of mischarged Val-tRNA(Ile) K01870 GO:0003674,GO:0003824,GO:0004812,GO:0004822,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006082,GO:0006139,GO:0006399,GO:0006412,GO:0006418,GO:0006428,GO:0006518,GO:0006520,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0016070,GO:0016874,GO:0016875,GO:0019538,GO:0019752,GO:0034641,GO:0034645,GO:0034660,GO:0043038,GO:0043039,GO:0043043,GO:0043170,GO:0043436,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044281,GO:0044424,GO:0044464,GO:0046483,GO:0071704,GO:0090304,GO:0140098,GO:0140101,GO:1901360,GO:1901564,GO:1901566,GO:1901576 6.1.1.5 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005289 541.0
DYD1_k127_2791063_1 protein methyltransferase activity - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000003234 263.0
DYD1_k127_2792428_0 PQQ-like domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001365 372.0
DYD1_k127_2792428_1 COG1228 Imidazolonepropionase and related K01443 - 3.5.1.25 0.000000000000000000000000000000000000000000000000000002103 203.0
DYD1_k127_2799010_0 Releases the supercoiling and torsional tension of DNA, which is introduced during the DNA replication and transcription, by transiently cleaving and rejoining one strand of the DNA duplex. Introduces a single-strand break via transesterification at a target site in duplex DNA. The scissile phosphodiester is attacked by the catalytic tyrosine of the enzyme, resulting in the formation of a DNA-(5'-phosphotyrosyl)-enzyme intermediate and the expulsion of a 3'-OH DNA strand. The free DNA strand then undergoes passage around the unbroken strand, thus removing DNA supercoils. Finally, in the religation step, the DNA 3'-OH attacks the covalent intermediate to expel the active-site tyrosine and restore the DNA phosphodiester backbone K03168 - 5.99.1.2 1.534e-219 718.0
DYD1_k127_2799010_1 Domain of unknown function (DUF5117) - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001433 554.0
DYD1_k127_2799010_2 BNR/Asp-box repeat - - - 0.000000000000000000000000000000000000000000000000000000000000000000000002044 250.0
DYD1_k127_2799010_3 Belongs to the cation diffusion facilitator (CDF) transporter (TC 2.A.4) family - - - 0.00000000000000000000000000000000000000000000000000009148 198.0
DYD1_k127_281590_0 Pyruvate ferredoxin oxidoreductase and related K00174 - 1.2.7.11,1.2.7.3 0.000000000000000000000000000000000000000000000000000000000000000000000001075 252.0
DYD1_k127_281590_1 Succinyl-CoA synthetase functions in the citric acid cycle (TCA), coupling the hydrolysis of succinyl-CoA to the synthesis of either ATP or GTP and thus represents the only step of substrate-level phosphorylation in the TCA. The alpha subunit of the enzyme binds the substrates coenzyme A and phosphate, while succinate binding and nucleotide specificity is provided by the beta subunit K01902 - 6.2.1.5 0.00000000000000000000000000000000000000000005963 172.0
DYD1_k127_2832145_0 Aspartyl-tRNA synthetase with relaxed tRNA specificity since it is able to aspartylate not only its cognate tRNA(Asp) but also tRNA(Asn). Reaction proceeds in two steps L-aspartate is first activated by ATP to form Asp-AMP and then transferred to the acceptor end of tRNA(Asp Asn) K01876 - 6.1.1.12 5.48e-197 631.0
DYD1_k127_2832145_1 RelA SpoT domain protein - - - 0.0000000000000000000000000000000000000000000000000000002137 208.0
DYD1_k127_2832145_2 PQQ-like domain - - - 0.000000000000000000000000000000006969 128.0
DYD1_k127_2832145_3 COG0515 Serine threonine protein K12132 - 2.7.11.1 0.00000000291 66.0
DYD1_k127_2838671_0 Spore coat protein CotH K01216,K07004 - 3.2.1.73 0.0000000000000000000000000000000000000000000000000000000000005564 226.0
DYD1_k127_2838671_1 CotH kinase protein K02487,K12543 - - 0.00000000000000000000000000007778 130.0
DYD1_k127_284129_0 Tetratricopeptide repeat - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001651 371.0
DYD1_k127_284129_1 cell adhesion involved in biofilm formation - - - 0.000000000000000000000000000000000000000000000000002331 208.0
DYD1_k127_284129_2 ABC-type multidrug transport system ATPase K01990 - - 0.00000000000000000000000000000626 126.0
DYD1_k127_284129_3 PFAM MazG nucleotide pyrophosphohydrolase - - - 0.000000000000000000000000000006577 123.0
DYD1_k127_284129_4 von Willebrand factor, type A - - - 0.00000000002273 78.0
DYD1_k127_284129_5 Psort location Cytoplasmic, score - - - 0.0004693 51.0
DYD1_k127_2841858_0 Oxidoreductase domain protein - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000001548 299.0
DYD1_k127_2841858_1 Involved in the biosynthesis of lipid A, a phosphorylated glycolipid that anchors the lipopolysaccharide to the outer membrane of the cell K00677 - 2.3.1.129 0.000000000000000000000000000000000000000000000000000000000004532 223.0
DYD1_k127_2841858_2 Glycosyltransferase like family 2 - - - 0.000000000000000000000000000000000000000000000000000000000009092 220.0
DYD1_k127_2841858_3 Glycosyltransferase like family 2 K03606,K07011 - - 0.00000000000000000000000000000000000000001273 163.0
DYD1_k127_2841858_4 Catalyzes the hydrolysis of UDP-3-O-myristoyl-N- acetylglucosamine to form UDP-3-O-myristoylglucosamine and acetate, the committed step in lipid A biosynthesis K02535,K16363 - 3.5.1.108,4.2.1.59 0.0000000000000000000000000000009434 123.0
DYD1_k127_2841858_5 dihydrolipoamide dehydrogenase K00382 - 1.8.1.4 0.0000000000000000000000001756 110.0
DYD1_k127_2841977_0 involved in molybdopterin and thiamine biosynthesis family 2 K21029 - 2.7.7.80 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003444 383.0
DYD1_k127_2858976_0 PFAM 3-Oxoacyl- acyl-carrier-protein (ACP) synthase III K22317 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003161 419.0
DYD1_k127_2858976_1 Cell shape determining protein MreB Mrl K03569 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004171 322.0
DYD1_k127_2858976_2 Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released K02405 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001681 315.0
DYD1_k127_2858976_3 GTP-binding signal recognition particle SRP54 K02404 - - 0.00000000000000000000000000000000000000000000000000000000000000000004331 246.0
DYD1_k127_2858976_4 SMART GGDEF domain containing protein - - - 0.0000000000000000000000000000000000000000000000000000000000000002353 231.0
DYD1_k127_2858976_5 Belongs to the ParA family K04562 - - 0.000000000000000000000000000000000000000000000000005253 193.0
DYD1_k127_2899000_0 Endonuclease Exonuclease Phosphatase K07004 - - 0.000000000000000007476 100.0
DYD1_k127_2899000_1 Endonuclease/Exonuclease/phosphatase family K07004 - - 0.000002266 62.0
DYD1_k127_2908303_0 Binds and transfers iron-sulfur (Fe-S) clusters to target apoproteins. Can hydrolyze ATP K03593 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002124 379.0
DYD1_k127_2908303_1 FlgD Ig-like domain K21449 - - 0.0002845 51.0
DYD1_k127_2911881_0 Aspartate-ammonia ligase K01914 GO:0003674,GO:0003824,GO:0004071,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006082,GO:0006520,GO:0006528,GO:0006529,GO:0006807,GO:0006950,GO:0006974,GO:0008150,GO:0008152,GO:0008652,GO:0009058,GO:0009066,GO:0009067,GO:0009987,GO:0016053,GO:0016211,GO:0016874,GO:0016879,GO:0016880,GO:0019752,GO:0032787,GO:0033554,GO:0034641,GO:0042802,GO:0043436,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0044283,GO:0044424,GO:0044444,GO:0044464,GO:0046394,GO:0050896,GO:0051716,GO:0071704,GO:0072330,GO:1901564,GO:1901566,GO:1901576,GO:1901605,GO:1901607 6.3.1.1 1.324e-210 660.0
DYD1_k127_2911881_1 Catalyzes the condensation of iminoaspartate with dihydroxyacetone phosphate to form quinolinate K03517 - 2.5.1.72 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001767 325.0
DYD1_k127_2927449_0 Glucose / Sorbosone dehydrogenase K21430 - - 7.645e-215 699.0
DYD1_k127_2927449_1 COG3119 Arylsulfatase A and related enzymes - - - 0.00000000000000000000000000000000000000000000000000000000000000000001545 252.0
DYD1_k127_2927449_2 PFAM PKD domain containing protein - - - 0.00000000000002148 88.0
DYD1_k127_2927449_3 Catalyzes the oxidation of erythronate-4-phosphate to 3- hydroxy-2-oxo-4-phosphonooxybutanoate K03473 GO:0000166,GO:0003674,GO:0003824,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006081,GO:0006725,GO:0006732,GO:0006766,GO:0006767,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0008614,GO:0008615,GO:0009058,GO:0009108,GO:0009110,GO:0009987,GO:0016491,GO:0016614,GO:0016616,GO:0017144,GO:0018130,GO:0019438,GO:0019637,GO:0033711,GO:0034641,GO:0036001,GO:0036094,GO:0042364,GO:0042816,GO:0042819,GO:0042822,GO:0042823,GO:0044237,GO:0044249,GO:0044271,GO:0044281,GO:0044283,GO:0044424,GO:0044444,GO:0044464,GO:0046184,GO:0046483,GO:0048037,GO:0050662,GO:0051186,GO:0051188,GO:0051287,GO:0055114,GO:0071704,GO:0072524,GO:0072525,GO:0090407,GO:0097159,GO:1901265,GO:1901360,GO:1901362,GO:1901363,GO:1901564,GO:1901566,GO:1901576,GO:1901615,GO:1901617 1.1.1.290 0.00000000000004339 75.0
DYD1_k127_2981752_0 PFAM Aldehyde dehydrogenase K04021 - - 1.073e-217 680.0
DYD1_k127_2981752_1 PFAM Ethanolamine utilization protein EutN carboxysome structural protein Ccml K04028 - - 0.0000000000000000000000000000000000002576 141.0
DYD1_k127_3010812_0 4Fe-4S dicluster domain - - - 1.386e-239 762.0
DYD1_k127_3010812_1 Belongs to the glycosyl hydrolase 57 family K07405 - 3.2.1.1 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004292 493.0
DYD1_k127_3010812_2 Catalyzes the phosphorylation of D-fructose 6-phosphate, the first committing step of glycolysis. Uses inorganic phosphate (PPi) as phosphoryl donor instead of ATP like common ATP-dependent phosphofructokinases (ATP-PFKs), which renders the reaction reversible, and can thus function both in glycolysis and gluconeogenesis. Consistently, PPi-PFK can replace the enzymes of both the forward (ATP-PFK) and reverse (fructose-bisphosphatase (FBPase)) reactions K21071 - 2.7.1.11,2.7.1.90 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005959 424.0
DYD1_k127_3010812_3 Starch synthase catalytic domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009807 385.0
DYD1_k127_3010812_4 electron transfer flavoprotein, alpha subunit K03522 - - 0.00000000000000000000000000000000000000000001777 163.0
DYD1_k127_3010812_5 Belongs to the OMP decarboxylase family. Type 2 subfamily K01591 GO:0003674,GO:0003824,GO:0004590,GO:0006139,GO:0006206,GO:0006207,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009112,GO:0009987,GO:0016829,GO:0016830,GO:0016831,GO:0018130,GO:0019856,GO:0034641,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0046112,GO:0046483,GO:0055086,GO:0071704,GO:0072527,GO:0072528,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576 4.1.1.23 0.000000000000001389 79.0
DYD1_k127_3033839_0 Involved in peptide bond synthesis. Stimulates efficient translation and peptide-bond synthesis on native or reconstituted 70S ribosomes in vitro. Probably functions indirectly by altering the affinity of the ribosome for aminoacyl-tRNA, thus increasing their reactivity as acceptors for peptidyl transferase K02356 GO:0003674,GO:0003676,GO:0003723,GO:0003746,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006412,GO:0006414,GO:0006518,GO:0006807,GO:0008135,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0019538,GO:0034641,GO:0034645,GO:0043043,GO:0043170,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044424,GO:0044464,GO:0071704,GO:0097159,GO:1901363,GO:1901564,GO:1901566,GO:1901576 - 0.00000000000000000000000000000000000000000009113 166.0
DYD1_k127_3033839_1 first, biotin carboxylase catalyzes the carboxylation of the carrier protein and then the transcarboxylase transfers the carboxyl group to form malonyl-CoA K02160 - - 0.000000000000000000000000000000003533 134.0
DYD1_k127_3033839_2 carboxylic ester hydrolase activity - - - 0.00000000000000000000000000000001439 138.0
DYD1_k127_3033839_3 Biotin carboxylase K01961 - 6.3.4.14,6.4.1.2 0.00000000001324 64.0
DYD1_k127_3042400_0 PFAM Phenylalanine and histidine ammonia-lyase K01745 - 4.3.1.3 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001598 415.0
DYD1_k127_3042400_1 Histidyl-tRNA synthetase K01892 - 6.1.1.21 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007103 359.0
DYD1_k127_3055044_0 Transglutaminase-like - - - 0.000000000000000000000000001009 124.0
DYD1_k127_3059574_0 TIR domain - - - 0.0000000000000000000001913 100.0
DYD1_k127_3059574_1 sequence-specific DNA binding - - - 0.000000000000000000002544 107.0
DYD1_k127_3059574_2 Potassium uptake protein K03498 - - 0.000000000004062 79.0
DYD1_k127_3068092_0 A type II topoisomerase that negatively supercoils closed circular double-stranded (ds) DNA in an ATP-dependent manner to modulate DNA topology and maintain chromosomes in an underwound state. Negative supercoiling favors strand separation, and DNA replication, transcription, recombination and repair, all of which involve strand separation. Also able to catalyze the interconversion of other topological isomers of dsDNA rings, including catenanes and knotted rings. Type II topoisomerases break and join 2 DNA strands simultaneously in an ATP-dependent manner K02469 - 5.99.1.3 2.804e-236 749.0
DYD1_k127_3091960_0 Protein tyrosine kinase K12132 - 2.7.11.1 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002896 354.0
DYD1_k127_3091960_1 Protein of unknown function (DUF819) - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001968 333.0
DYD1_k127_3091960_2 DinB superfamily - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000008225 250.0
DYD1_k127_3091960_3 Parallel beta-helix repeats - - - 0.0000000000000000000000000000000000000000000000000000000000000000000001794 273.0
DYD1_k127_3091960_4 Calcium ion binding. It is involved in the biological process described with cell adhesion K04659 GO:0000902,GO:0001501,GO:0001503,GO:0001932,GO:0001934,GO:0001936,GO:0001938,GO:0001968,GO:0002020,GO:0002682,GO:0002684,GO:0002685,GO:0002687,GO:0002688,GO:0002690,GO:0003416,GO:0003417,GO:0003674,GO:0005102,GO:0005178,GO:0005198,GO:0005201,GO:0005488,GO:0005496,GO:0005499,GO:0005509,GO:0005515,GO:0005518,GO:0005539,GO:0005575,GO:0005576,GO:0005604,GO:0005615,GO:0005622,GO:0005623,GO:0005737,GO:0005783,GO:0005912,GO:0005924,GO:0005927,GO:0006928,GO:0006950,GO:0007155,GO:0007160,GO:0007275,GO:0007399,GO:0007517,GO:0007610,GO:0008150,GO:0008201,GO:0008284,GO:0008289,GO:0009653,GO:0009790,GO:0009887,GO:0009888,GO:0009893,GO:0009987,GO:0010562,GO:0010604,GO:0010941,GO:0012505,GO:0014812,GO:0016043,GO:0016203,GO:0016477,GO:0016525,GO:0016528,GO:0016529,GO:0019220,GO:0019222,GO:0019842,GO:0019899,GO:0021700,GO:0022008,GO:0022603,GO:0022607,GO:0022610,GO:0030030,GO:0030054,GO:0030055,GO:0030154,GO:0030182,GO:0030198,GO:0030334,GO:0030335,GO:0030855,GO:0031012,GO:0031175,GO:0031323,GO:0031325,GO:0031399,GO:0031401,GO:0031589,GO:0031594,GO:0032101,GO:0032103,GO:0032268,GO:0032270,GO:0032501,GO:0032502,GO:0032879,GO:0032989,GO:0032990,GO:0032991,GO:0033554,GO:0033555,GO:0033627,GO:0034103,GO:0034976,GO:0035265,GO:0035989,GO:0036094,GO:0040007,GO:0040011,GO:0040012,GO:0040017,GO:0042127,GO:0042325,GO:0042327,GO:0042981,GO:0043062,GO:0043066,GO:0043067,GO:0043069,GO:0043167,GO:0043168,GO:0043169,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0043236,GO:0043237,GO:0043394,GO:0043395,GO:0043931,GO:0043933,GO:0044085,GO:0044421,GO:0044424,GO:0044444,GO:0044464,GO:0044877,GO:0045202,GO:0045765,GO:0045937,GO:0046872,GO:0048265,GO:0048266,GO:0048468,GO:0048471,GO:0048513,GO:0048518,GO:0048519,GO:0048522,GO:0048523,GO:0048583,GO:0048584,GO:0048589,GO:0048646,GO:0048666,GO:0048699,GO:0048705,GO:0048731,GO:0048736,GO:0048799,GO:0048812,GO:0048856,GO:0048858,GO:0048869,GO:0048870,GO:0050678,GO:0050679,GO:0050730,GO:0050731,GO:0050789,GO:0050793,GO:0050794,GO:0050839,GO:0050840,GO:0050896,GO:0050920,GO:0050921,GO:0051093,GO:0051171,GO:0051173,GO:0051174,GO:0051179,GO:0051216,GO:0051239,GO:0051241,GO:0051246,GO:0051247,GO:0051259,GO:0051260,GO:0051270,GO:0051272,GO:0051451,GO:0051674,GO:0051716,GO:0060173,GO:0060231,GO:0060255,GO:0060343,GO:0060346,GO:0060348,GO:0060349,GO:0060350,GO:0060351,GO:0060429,GO:0060538,GO:0060548,GO:0061053,GO:0061061,GO:0061383,GO:0061430,GO:0061448,GO:0062023,GO:0065003,GO:0065007,GO:0070161,GO:0070977,GO:0071603,GO:0071622,GO:0071624,GO:0071695,GO:0071840,GO:0080090,GO:0090022,GO:0090023,GO:0090136,GO:0097159,GO:0097367,GO:0098609,GO:0098868,GO:0120036,GO:0120039,GO:1901342,GO:1901343,GO:1901681,GO:1902622,GO:1902624,GO:2000026,GO:2000145,GO:2000147,GO:2000181 - 0.000000000000001393 93.0
DYD1_k127_3097900_0 Protein tyrosine kinase K12132 - 2.7.11.1 0.000000000000000000000000000000000000000000000000000000000000000000000000000003842 293.0
DYD1_k127_3097900_1 ATPase domain of DNA mismatch repair MUTS family - - - 0.00000000000000000000000000000000000000000000000000417 199.0
DYD1_k127_3097900_2 DNA-templated transcription, initiation K03088 - - 0.00000004765 63.0
DYD1_k127_3097900_3 Recombinase zinc beta ribbon domain - - - 0.0001065 51.0
DYD1_k127_3101813_0 DEAD DEAH box helicase - - - 6.51e-203 658.0
DYD1_k127_3101855_0 Protein tyrosine kinase K12132 - 2.7.11.1 0.000000000000000000000000000000000000000000000000000000000000000000003753 243.0
DYD1_k127_3101855_1 Calcineurin-like phosphoesterase - - - 0.00000000000000000000000000000000000000000000000005321 188.0
DYD1_k127_3101855_2 Polymorphic membrane protein Chlamydia - - - 0.00000000000000000000000000000001535 142.0
DYD1_k127_3101855_3 Conserved repeat domain - - - 0.00000000000000000000000591 114.0
DYD1_k127_3104185_0 Catalyzes the attachment of threonine to tRNA(Thr) in a two-step reaction L-threonine is first activated by ATP to form Thr-AMP and then transferred to the acceptor end of tRNA(Thr) K01868 GO:0003674,GO:0003824,GO:0004812,GO:0004829,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006082,GO:0006139,GO:0006399,GO:0006412,GO:0006418,GO:0006435,GO:0006518,GO:0006520,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0016070,GO:0016874,GO:0016875,GO:0019538,GO:0019752,GO:0034641,GO:0034645,GO:0034660,GO:0043038,GO:0043039,GO:0043043,GO:0043170,GO:0043436,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044281,GO:0044424,GO:0044464,GO:0046483,GO:0071704,GO:0090304,GO:0140098,GO:0140101,GO:1901360,GO:1901564,GO:1901566,GO:1901576 6.1.1.3 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001338 318.0
DYD1_k127_3104185_1 Protein of unknown function (DUF1559) - - - 0.00000000002296 75.0
DYD1_k127_3105109_0 CheY-like receiver AAA-type ATPase and DNA-binding domains - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001825 402.0
DYD1_k127_3105109_1 Radical SAM enzyme that catalyzes the cyclization of dehypoxanthine futalosine (DHFL) into cyclic dehypoxanthine futalosine (CDHFL), a step in the biosynthesis of menaquinone (MK, vitamin K2) K11784 - 1.21.98.1 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001058 345.0
DYD1_k127_3105109_2 PFAM RNP-1 like RNA-binding protein - - - 0.000000000000000000000000002841 123.0
DYD1_k127_3105109_3 HicB_like antitoxin of bacterial toxin-antitoxin system - - - 0.000000000000008112 78.0
DYD1_k127_3105109_4 YcxB-like protein - - - 0.0000001939 61.0
DYD1_k127_3151670_0 Histidine kinase K13924 - 2.1.1.80,3.1.1.61 6.903e-283 930.0
DYD1_k127_3151670_1 PFAM Response regulator receiver domain K07689 - - 0.0000000000000000000000000000000000000000000000000000000000000000003075 239.0
DYD1_k127_3151670_2 Histidine kinase K07675,K09684 - 2.7.13.3 0.000000000000000000000000000000000008867 160.0
DYD1_k127_3165896_0 Integral membrane protein TerC family K05794 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007139 432.0
DYD1_k127_3165896_1 PFAM Stage II sporulation E family protein - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000004895 278.0
DYD1_k127_3165896_2 Catalyzes the hydrolysis of inorganic pyrophosphate (PPi) forming two phosphate ions K01507 - 3.6.1.1 0.00000000000000000000000000000000000000000000000000000000000000000000000109 249.0
DYD1_k127_3165896_3 Mediates influx of magnesium ions K03284 - - 0.000000000000000000000000000000000000000000000000009213 194.0
DYD1_k127_3168530_0 Cytochrome c - - - 3.174e-241 751.0
DYD1_k127_3168530_1 water channel activity K02440,K06188,K09874 - - 0.0000000000000000000000000000000000000000000000000000000008603 209.0
DYD1_k127_3168530_2 nucleotidyltransferase activity K07076 - - 0.00000000000182 72.0
DYD1_k127_3186042_0 O-methyltransferase activity - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003211 584.0
DYD1_k127_3186042_1 WD40-like Beta Propeller Repeat - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001611 346.0
DYD1_k127_3186042_2 PFAM Type II secretion system F K12511 - - 0.00000000000000000000000000000000000001236 150.0
DYD1_k127_3186042_3 Putative Flp pilus-assembly TadE/G-like - - - 0.00000000000000005287 94.0
DYD1_k127_3186042_4 peptidyl-tyrosine sulfation - - - 0.000002014 60.0
DYD1_k127_3190272_0 Allows the formation of correctly charged Asn-tRNA(Asn) or Gln-tRNA(Gln) through the transamidation of misacylated Asp- tRNA(Asn) or Glu-tRNA(Gln) in organisms which lack either or both of asparaginyl-tRNA or glutaminyl-tRNA synthetases. The reaction takes place in the presence of glutamine and ATP through an activated phospho-Asp-tRNA(Asn) or phospho-Glu-tRNA(Gln) K02434 - 6.3.5.6,6.3.5.7 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001128 398.0
DYD1_k127_3190272_1 MacB-like periplasmic core domain K02004 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000002545 271.0
DYD1_k127_3190272_2 Belongs to the LOG family K06966 - 3.2.2.10 0.0000000000000000000000000000000000000004045 154.0
DYD1_k127_3190272_3 Flavin reductase like domain - - - 0.00000000000000000000000000999 115.0
DYD1_k127_3190272_5 Domain of unknown function (DUF4870) K09940 - - 0.0000000000000000000000664 102.0
DYD1_k127_3190272_6 Dolichyl-phosphate-mannose-protein mannosyltransferase - - - 0.0003972 53.0
DYD1_k127_3200533_0 3'-5' exoribonuclease that releases 5'-nucleoside monophosphates and is involved in maturation of structured RNAs K12573 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008896 494.0
DYD1_k127_3200533_1 Glycosyl transferases group 1 - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001171 358.0
DYD1_k127_3200533_3 DDE domain - - - 0.00000003833 54.0
DYD1_k127_322155_0 Bacterial protein of unknown function (DUF885) - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005112 480.0
DYD1_k127_322155_1 twitching motility protein K02669 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001096 385.0
DYD1_k127_322155_2 helicase K03722 - 3.6.4.12 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001326 346.0
DYD1_k127_322155_3 Type II secretory pathway, ATPase PulE Tfp pilus assembly pathway, ATPase PilB K02454 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000004212 305.0
DYD1_k127_3234193_0 COG1960 Acyl-CoA - - - 0.0000000000000000000000000000000000000000000000000000006291 208.0
DYD1_k127_3234193_1 dTDP-4-dehydrorhamnose 3,5-epimerase K01790 - 5.1.3.13 0.0000000000000000000000000000000000000000000000000001946 189.0
DYD1_k127_3234193_2 it plays a direct role in the translocation of protons across the membrane K02108 - - 0.000000000000000000000000000000000000000000001026 177.0
DYD1_k127_3234193_3 F(1)F(0) ATP synthase produces ATP from ADP in the presence of a proton or sodium gradient. F-type ATPases consist of two structural domains, F(1) containing the extramembraneous catalytic core and F(0) containing the membrane proton channel, linked together by a central stalk and a peripheral stalk. During catalysis, ATP synthesis in the catalytic domain of F(1) is coupled via a rotary mechanism of the central stalk subunits to proton translocation K02113 - - 0.000000000000000000000006824 109.0
DYD1_k127_3234193_4 Produces ATP from ADP in the presence of a proton gradient across the membrane. The alpha chain is a regulatory subunit K02111 - 3.6.3.14 0.0000000000000000000002693 97.0
DYD1_k127_3234193_5 ATP synthesis coupled proton transport K02109 - - 0.0000000000000000000009446 102.0
DYD1_k127_3234193_6 F(1)F(0) ATP synthase produces ATP from ADP in the presence of a proton or sodium gradient. F-type ATPases consist of two structural domains, F(1) containing the extramembraneous catalytic core and F(0) containing the membrane proton channel, linked together by a central stalk and a peripheral stalk. During catalysis, ATP synthesis in the catalytic domain of F(1) is coupled via a rotary mechanism of the central stalk subunits to proton translocation K02110 - - 0.000000000002328 72.0
DYD1_k127_3234193_7 function for this protein is to guide the assembly of the membrane sector of the ATPase enzyme complex K02116 - - 0.00000007233 58.0
DYD1_k127_3274130_0 Belongs to the class-II aminoacyl-tRNA synthetase family K04567 - 6.1.1.6 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000107 445.0
DYD1_k127_3274130_1 ABC-type transport system involved in lipoprotein release permease component K09808 - - 0.000000000000000451 93.0
DYD1_k127_3288676_0 - - - - 0.00000005839 63.0
DYD1_k127_3289431_0 Sigma-70 factor, region 1.1 K03086 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001366 475.0
DYD1_k127_3289431_1 thus facilitating recognition of the initiation point. It is needed to translate mRNA with a short Shine-Dalgarno (SD) purine-rich sequence K02945 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004747 392.0
DYD1_k127_3289431_2 - - - - 0.000000000000000000242 98.0
DYD1_k127_3289431_3 RDD family - - - 0.0000109 58.0
DYD1_k127_3289431_4 - - - - 0.00001154 57.0
DYD1_k127_3305119_0 Glycosyl transferases group 1 K02844 - - 0.000000000000000000003856 103.0
DYD1_k127_3305119_1 - - - - 0.0000000000000000001378 93.0
DYD1_k127_3305119_2 Protein of unknown function (DUF3969) - - - 0.000683 47.0
DYD1_k127_3324320_0 KR domain K00019 - 1.1.1.30 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002328 334.0
DYD1_k127_3324320_1 Forms oxaloacetate, a four-carbon dicarboxylic acid source for the tricarboxylic acid cycle K01595 - 4.1.1.31 0.000000002665 61.0
DYD1_k127_3332052_0 Belongs to the 'phage' integrase family - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000263 399.0
DYD1_k127_3332052_1 The beta subunit is responsible for the synthesis of L- tryptophan from indole and L-serine K01696 - 4.2.1.20 0.000000000000000000000000000000000000000000000000000000000000000000000000000000004606 284.0
DYD1_k127_3332052_2 COG4747 ACT domain-containing protein - - - 0.00000000000000000000000000000001154 134.0
DYD1_k127_3336759_0 Glycogen debranching enzyme - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004318 559.0
DYD1_k127_3336759_1 Domain of unknown function (DUF4139) - - - 0.0000000000000000000000000000000000000000000000000000000000006657 216.0
DYD1_k127_3354176_0 Secretion system protein K02283 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009882 556.0
DYD1_k127_3354176_1 Belongs to the GSP D family K02280 - - 0.00000000000000000000000000000000000000000000000000000000000000000002549 252.0
DYD1_k127_3354176_2 Secretion system protein K12511 - - 0.00000000000000000000000000000000000000000000000000000006379 208.0
DYD1_k127_3354176_3 type II secretion system protein K12510 - - 0.000000000000000000000000000000000000000000000000000005293 203.0
DYD1_k127_3354176_4 Flp pilus assembly protein, ATPase CpaE K02282 - - 0.0000000000000000000000000000000000000000001948 175.0
DYD1_k127_3390592_0 Eco57I restriction-modification methylase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000002251 301.0
DYD1_k127_3390592_1 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain K09459 - 4.1.1.82 0.00000000000000000000000000002628 117.0
DYD1_k127_3390592_2 Putative regulatory protein - - - 0.0000000001874 68.0
DYD1_k127_3403855_0 Biopolymer transport protein K03559 - - 0.00001613 53.0
DYD1_k127_3403855_1 Transaldolase K00616 - 2.2.1.2 0.00003401 48.0
DYD1_k127_3403855_2 Transglycosylase SLT domain K08309 - - 0.000863 52.0
DYD1_k127_3407460_0 Protein tyrosine kinase K12132 - 2.7.11.1 0.000000000000000000000000000000000004882 150.0
DYD1_k127_3411845_0 involved in chromosome partitioning K03496 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000003067 294.0
DYD1_k127_3411845_1 Responsible for channeling the electrons from the oxidation of dihydroorotate from the FMN redox center in the PyrD type B subunit to the ultimate electron acceptor NAD( ) K02823 - - 0.00000000000000000000000000000000000000256 160.0
DYD1_k127_3411845_2 Periplasmic binding protein domain K10439 - - 0.0001269 53.0
DYD1_k127_34127_0 PFAM Tetratricopeptide TPR_1 repeat-containing protein - - - 0.0000000000000000000000000000000000000000000000000007705 205.0
DYD1_k127_34127_1 SMART Tetratricopeptide - - - 0.00000000001345 69.0
DYD1_k127_341520_0 PFAM SpoVR family protein K06415 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002879 595.0
DYD1_k127_341520_1 Belongs to the UPF0229 family K09786 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007872 470.0
DYD1_k127_341520_2 aminoacyl-histidine dipeptidase K01270 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005087 390.0
DYD1_k127_341520_3 AI-2E family transporter - - - 0.00000000000000000000000000000000000000000000000000000001528 211.0
DYD1_k127_341520_4 Low molecular weight phosphatase family K03741 - 1.20.4.1 0.000000000000000000000000000000000000000000000000000003086 194.0
DYD1_k127_341520_5 - - - - 0.00000000000000000000000000000007613 128.0
DYD1_k127_3423027_0 6-phosphogluconolactonase activity - - - 0.00000002178 64.0
DYD1_k127_3448145_0 Cytochrome c3 - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005019 370.0
DYD1_k127_3448145_1 Putative outer membrane beta-barrel porin, MtrB/PioB - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001909 337.0
DYD1_k127_3449203_0 Hexapeptide repeat of succinyl-transferase - - - 0.000000000178 71.0
DYD1_k127_3468871_0 Enoyl-CoA hydratase/isomerase K18383 - 4.1.2.41,4.2.1.101 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004307 334.0
DYD1_k127_3468871_1 TonB dependent receptor - - - 0.000000000000000000000000000000000000000000000000000000000000000001431 253.0
DYD1_k127_3468871_2 xanthine dehydrogenase a b hammerhead K11177 - 1.17.1.4 0.00000000000000000000000000000000000000000000000000000000000006508 223.0
DYD1_k127_3505257_0 TIGRFAM DNA protecting protein DprA K04096 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008743 308.0
DYD1_k127_3505257_1 Provides the (R)-glutamate required for cell wall biosynthesis K01776 - 5.1.1.3 0.00000000000000000000000000000000000000000000000000000000000000000000000000001601 269.0
DYD1_k127_3505257_2 Isochorismatase family - - - 0.00000000000000000000000000000000000001245 152.0
DYD1_k127_3505257_3 Thrombospondin type 3 repeat - - - 0.00000000000000000000000000000000001561 155.0
DYD1_k127_3505257_5 E-Z type HEAT repeats - - - 0.0001261 53.0
DYD1_k127_350542_0 Calcineurin-like phosphoesterase K07098 - - 0.000000000000000000000000000000001191 147.0
DYD1_k127_350542_1 Thioredoxin - - - 0.00000000000000000000005251 115.0
DYD1_k127_350542_2 - - - - 0.00000000003807 72.0
DYD1_k127_3520745_0 Belongs to the peptidase S8 family - - - 0.0000000000000000000000000000000000000006368 171.0
DYD1_k127_3520745_1 domain protein - - - 0.000000000000000000000001492 121.0
DYD1_k127_3532568_0 Flavin containing amine oxidoreductase - - - 1.982e-223 704.0
DYD1_k127_3532568_1 Oxidoreductase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002233 349.0
DYD1_k127_3532568_2 Glycosyl transferase family 21 - - - 0.000000000000000000000000000000000000000000000008816 187.0
DYD1_k127_3532568_3 Isoprenylcysteine carboxyl methyltransferase (ICMT) family - - - 0.000000000000000000000000000000000000000005838 162.0
DYD1_k127_3532568_4 Tetratricopeptide repeat - - - 0.00001017 57.0
DYD1_k127_3538004_0 - - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000153 262.0
DYD1_k127_3538004_1 ECF sigma factor - - - 0.000000000000000000000000000000000000000000000000000000805 198.0
DYD1_k127_3543406_0 May play a key role in the regulation of the intracellular concentration of adenosylhomocysteine K01251 GO:0000096,GO:0003674,GO:0003824,GO:0004013,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006082,GO:0006139,GO:0006520,GO:0006534,GO:0006555,GO:0006575,GO:0006725,GO:0006732,GO:0006790,GO:0006807,GO:0008150,GO:0008152,GO:0009066,GO:0009069,GO:0009116,GO:0009119,GO:0009987,GO:0016787,GO:0016801,GO:0016802,GO:0017144,GO:0019752,GO:0033353,GO:0034641,GO:0042278,GO:0043436,GO:0044237,GO:0044238,GO:0044281,GO:0044424,GO:0044444,GO:0044464,GO:0046128,GO:0046439,GO:0046483,GO:0046498,GO:0046500,GO:0051186,GO:0055086,GO:0071704,GO:0072521,GO:1901135,GO:1901360,GO:1901564,GO:1901605,GO:1901657 3.3.1.1 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001906 365.0
DYD1_k127_3543406_1 FG-GAP repeat - - - 0.00000000000000000000000000000000000000000000001468 188.0
DYD1_k127_3543406_2 cytochrome C peroxidase - - - 0.0000000000000000000000000000000002856 151.0
DYD1_k127_3543406_3 Belongs to the 'phage' integrase family - - - 0.000003662 56.0
DYD1_k127_3551493_0 The glycine cleavage system catalyzes the degradation of glycine K00605 - 2.1.2.10 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003687 429.0
DYD1_k127_3557117_0 Oxidoreductase family, NAD-binding Rossmann fold K13018 - 2.3.1.201 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005432 378.0
DYD1_k127_3557117_1 PFAM ABC transporter related K01990,K09691,K09693 - 3.6.3.40 0.0000000000000000000000000000000000000000000000000000000000000000412 232.0
DYD1_k127_3557117_2 Methionine biosynthesis protein MetW - - - 0.00000000001396 73.0
DYD1_k127_3557928_0 Belongs to the metallo-dependent hydrolases superfamily. Adenine deaminase family K01486 - 3.5.4.2 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002816 540.0
DYD1_k127_3557928_1 COG0491 Zn-dependent hydrolases, including glyoxylases - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000518 396.0
DYD1_k127_3557928_2 Iron-regulated protein - - - 0.00000000000000000000000000001827 132.0
DYD1_k127_3557928_3 Belongs to the bacterial ribosomal protein bS16 family K02959 GO:0003674,GO:0003735,GO:0005198,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005840,GO:0006412,GO:0006518,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0015935,GO:0019538,GO:0032991,GO:0034641,GO:0034645,GO:0043043,GO:0043170,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044446,GO:0044464,GO:0071704,GO:1901564,GO:1901566,GO:1901576,GO:1990904 - 0.000000000000000000255 90.0
DYD1_k127_356078_0 Diacylglycerol kinase - - - 0.000000000000000000000000000002091 132.0
DYD1_k127_356078_1 Anaphase-promoting complex, cyclosome, subunit 3 - - - 0.0000137 58.0
DYD1_k127_356078_2 - - - - 0.0002109 54.0
DYD1_k127_3567128_0 Phage integrase family - - - 0.0000000000000000000000000000000000000000000000002848 192.0
DYD1_k127_3567128_1 Phage integrase family - - - 0.00000000000000000000000000000000139 149.0
DYD1_k127_3567128_2 Resolvase, N terminal domain - - - 0.00000000000000000000176 96.0
DYD1_k127_3567128_3 Helix-turn-helix domain - - - 0.000001665 54.0
DYD1_k127_3587872_0 Phage integrase family - - - 0.000000000000005969 83.0
DYD1_k127_3587872_1 serine-type endopeptidase activity - - - 0.0000000001861 74.0
DYD1_k127_3592096_0 3-hydroxymyristoyl 3-hydroxydecanoyl-(acyl carrier protein) K02372 - 4.2.1.59 0.0000000000000000000000000000000000000000001107 164.0
DYD1_k127_3592096_1 3-hydroxymyristoyl 3-hydroxydecanoyl-(acyl carrier protein) K02372 - 4.2.1.59 0.000000000000000000000000000000000000000000165 164.0
DYD1_k127_3592096_2 Carrier of the growing fatty acid chain in fatty acid biosynthesis - - - 0.00000000000000000000000000000000000000176 151.0
DYD1_k127_3592096_3 - - - - 0.0008767 48.0
DYD1_k127_3599763_0 SMART Tetratricopeptide - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004491 355.0
DYD1_k127_3599763_1 PFAM Glycosyl transferase, group 1 - - - 0.00000000000000000000000000000000657 141.0
DYD1_k127_3599763_2 Belongs to the MraZ family K03925 - - 0.00000000000000000007288 95.0
DYD1_k127_3625756_0 COG1228 Imidazolonepropionase and related K01443 - 3.5.1.25 8.923e-210 693.0
DYD1_k127_3625756_1 cytochrome C peroxidase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007353 544.0
DYD1_k127_3625756_2 Histidine-specific methyltransferase, SAM-dependent - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007989 347.0
DYD1_k127_3625756_3 - - - - 0.00000000000000000000000000000000002956 139.0
DYD1_k127_3625756_4 Belongs to the class-II aminoacyl-tRNA synthetase family. Phe-tRNA synthetase alpha subunit type 1 subfamily K01889 - 6.1.1.20 0.000000000007042 70.0
DYD1_k127_3631546_0 - K01992 - - 0.0000000000000497 85.0
DYD1_k127_3631546_1 ABC transporter permease K02034 - - 0.000000000001516 67.0
DYD1_k127_3631601_0 Protein conserved in bacteria K07654 - 2.7.13.3 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001356 341.0
DYD1_k127_3631601_1 ATPases associated with a variety of cellular activities - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003911 318.0
DYD1_k127_3631601_2 glycosyl transferase family 2 - - - 0.00000000000000000000000000000000000000000000000000000000000000000001342 251.0
DYD1_k127_3631601_3 Pyridoxal 5'-phosphate (PLP)-binding protein, which is involved in PLP homeostasis K06997 - - 0.00000000000000000000000000000000000000000000000000000000007072 214.0
DYD1_k127_3631601_4 WD40-like Beta Propeller Repeat - - - 0.0000000001815 75.0
DYD1_k127_364115_0 Glycosyl transferases group 1 K00786 - - 0.000000000000000000000000000000000000000000000000000000000000000000000006845 262.0
DYD1_k127_364115_1 Acetyltransferase (GNAT) domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000455 243.0
DYD1_k127_364115_2 ATPase activity K01990 - - 0.0000000000000000000000002866 109.0
DYD1_k127_364115_3 lipoprotein - - - 0.0000001172 59.0
DYD1_k127_364115_4 TIGRFAM capsular exopolysaccharide family - - - 0.000002143 57.0
DYD1_k127_3643244_0 Catalyzes the reversible phosphorylation of S-methyl-5'- thioadenosine (MTA) to adenine and 5-methylthioribose-1-phosphate. Involved in the breakdown of MTA, a major by-product of polyamine biosynthesis. Responsible for the first step in the methionine salvage pathway after MTA has been generated from S- adenosylmethionine. Has broad substrate specificity with 6- aminopurine nucleosides as preferred substrates K00772 - 2.4.2.28 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001257 332.0
DYD1_k127_3643244_1 homoserine kinase activity K02204,K13059 - 2.7.1.162,2.7.1.39 0.000000000000000000000000000000000000000003116 160.0
DYD1_k127_365100_0 Domain of unknown function (DUF4143) - - - 0.0000000000000000000000000000000003361 145.0
DYD1_k127_365100_1 Bacterial pre-peptidase C-terminal domain - - - 0.00000000000000000000000000000004597 131.0
DYD1_k127_368655_0 Flagellar hook protein FlgE K02390 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003707 389.0
DYD1_k127_368655_1 Belongs to the N(4) N(6)-methyltransferase family K00571 - 2.1.1.72 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001417 376.0
DYD1_k127_368655_4 PemK-like, MazF-like toxin of type II toxin-antitoxin system K07171 - - 0.00000000000000000000000000000000000003004 148.0
DYD1_k127_368655_5 PIN domain - - - 0.00000000000000000000000000000001983 131.0
DYD1_k127_368655_6 FRG domain - - - 0.000000000000000000002434 104.0
DYD1_k127_368655_7 belongs to the aldehyde dehydrogenase family K00128 - 1.2.1.3 0.0000000000000000009724 85.0
DYD1_k127_368655_8 - - - - 0.000000000000002187 78.0
DYD1_k127_368655_9 protein, possibly involved in K02385 - - 0.000000000000002742 78.0
DYD1_k127_3686721_0 Belongs to the dicarboxylate amino acid cation symporter (DAACS) (TC 2.A.23) family K03309,K11102,K11103 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001842 338.0
DYD1_k127_3686721_1 Phospholipase/Carboxylesterase - - - 0.0000000000005929 78.0
DYD1_k127_3687341_0 PDZ DHR GLGF domain protein K04771 - 3.4.21.107 0.0000000000000000000000000000000000000000000000000000000000000003595 234.0
DYD1_k127_3687341_1 Catalyzes the dehydration of the S-form of NAD(P)HX at the expense of ADP, which is converted to AMP. Together with NAD(P)HX epimerase, which catalyzes the epimerization of the S- and R-forms, the enzyme allows the repair of both epimers of NAD(P)HX, a damaged form of NAD(P)H that is a result of enzymatic or heat-dependent hydration K17758,K17759 - 4.2.1.136,5.1.99.6 0.00000000000000000000000000000000000000000000000000000000000003353 227.0
DYD1_k127_3687341_2 PDZ DHR GLGF domain protein - - - 0.000000000000000000000000000000000000000000000000000000000003841 221.0
DYD1_k127_3687341_3 Domain of unknown function (4846) - - - 0.0000000000000000000000000000000501 139.0
DYD1_k127_3713145_0 The beta subunit is responsible for the synthesis of L- tryptophan from indole and L-serine K01696 - 4.2.1.20 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000249 341.0
DYD1_k127_3713145_1 The alpha subunit is responsible for the aldol cleavage of indoleglycerol phosphate to indole and glyceraldehyde 3- phosphate K01695 - 4.2.1.20 0.000000000000000000000000000000000000000000000000000000003924 209.0
DYD1_k127_3713145_2 Couples transcription and DNA repair by recognizing RNA polymerase (RNAP) stalled at DNA lesions. Mediates ATP-dependent release of RNAP and its truncated transcript from the DNA, and recruitment of nucleotide excision repair machinery to the damaged site K03723 - - 0.000000000000000000000000000001013 131.0
DYD1_k127_3732831_0 FG-GAP repeat - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000005669 291.0
DYD1_k127_3732831_1 PFAM PfkB - - - 0.000000000000000000000000000000000000000000000000000000000000000000001413 242.0
DYD1_k127_3732831_2 Methylates the class 1 translation termination release factors RF1 PrfA and RF2 PrfB on the glutamine residue of the universally conserved GGQ motif K02493 GO:0003674,GO:0003824,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0008150,GO:0008152,GO:0008168,GO:0008757,GO:0016740,GO:0016741,GO:0032259,GO:0044424,GO:0044444,GO:0044464 2.1.1.297 0.00000000000000000000000000000000000000000000000000000000000000000004195 244.0
DYD1_k127_3732831_3 ADP-heptose-lipopolysaccharide heptosyltransferase activity K02841,K02843,K02849,K12982 - - 0.000000000000000000000000000000000000000000000000000000000000000003645 241.0
DYD1_k127_3732831_4 FG-GAP repeat - - - 0.0000000000000000000000000000000000000000000001631 187.0
DYD1_k127_3732831_5 Hydrolyzes RNA 2',3'-cyclic phosphodiester to an RNA 2'- phosphomonoester K01975 - 3.1.4.58 0.0000000000000000000000000000001314 130.0
DYD1_k127_3732831_6 M6 family metalloprotease domain protein - - - 0.000000000000000000000000008176 126.0
DYD1_k127_3732831_7 Thrombospondin type 3 repeat - - - 0.000000000000003037 90.0
DYD1_k127_3747388_0 Probably involved in the osmoprotection via the biosynthesis of trehalose. Catalyzes the transfer of glucose from UDP-glucose (UDP-Glc) to D-glucose 6-phosphate (Glc-6-P) to form trehalose-6-phosphate. Acts with retention of the anomeric configuration of the UDP-sugar donor K00697 - 2.4.1.15,2.4.1.347 1.037e-304 949.0
DYD1_k127_3747388_1 Activator of Hsp90 ATPase 1 family protein - - - 0.0000005461 53.0
DYD1_k127_3747388_2 Activator of Hsp90 ATPase 1 family protein - - - 0.000006179 55.0
DYD1_k127_375827_0 ATP cob(I)alamin adenosyltransferase K00798 - 2.5.1.17 0.000000000000000000000000000000000000000000000000005203 186.0
DYD1_k127_375827_1 ABC-type transport system involved in resistance to organic solvents, periplasmic component K02067 - - 0.00000000305 68.0
DYD1_k127_376496_0 Belongs to the MurCDEF family K01924 - 6.3.2.8 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004867 396.0
DYD1_k127_376496_1 Cell wall formation K00075 - 1.3.1.98 0.0000000000000000000000000000000000000000000000000000000000000000002517 239.0
DYD1_k127_376496_2 Belongs to the D-alanine--D-alanine ligase family K01921 - 6.3.2.4 0.000000000000000000000000000000000000000000000000000000000003525 220.0
DYD1_k127_376496_3 Cell wall formation. Catalyzes the transfer of a GlcNAc subunit on undecaprenyl-pyrophosphoryl-MurNAc-pentapeptide (lipid intermediate I) to form undecaprenyl-pyrophosphoryl-MurNAc- (pentapeptide)GlcNAc (lipid intermediate II) K02563 - 2.4.1.227 0.00000000000000000000000000000000000000000000000000002194 204.0
DYD1_k127_376496_4 Essential cell division protein. May link together the upstream cell division proteins, which are predominantly cytoplasmic, with the downstream cell division proteins, which are predominantly periplasmic. May control correct divisome assembly - - - 0.000000003587 68.0
DYD1_k127_376496_5 Belongs to the SEDS family K03588 - - 0.00000001254 58.0
DYD1_k127_3778053_0 Required for rescue of stalled ribosomes mediated by trans-translation. Binds to transfer-messenger RNA (tmRNA), required for stable association of tmRNA with ribosomes. tmRNA and SmpB together mimic tRNA shape, replacing the anticodon stem-loop with SmpB. tmRNA is encoded by the ssrA gene K03664 - - 0.0000000000000000000000000000000000000000005058 162.0
DYD1_k127_3778053_1 PFAM phosphoesterase, RecJ domain protein K06881 - 3.1.13.3,3.1.3.7 0.00000000000000000000000000000000000006848 154.0
DYD1_k127_3778053_2 Sigma-70, region 4 K03088 - - 0.00000000000000000000000001124 119.0
DYD1_k127_3778053_3 Putative zinc-finger - - - 0.00006318 53.0
DYD1_k127_37797_0 Flagellin is the subunit protein which polymerizes to form the filaments of bacterial flagella K02406 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002167 345.0
DYD1_k127_37797_1 flagellar hook-associated protein 2 K02407 - - 0.00000000000000000000000000000000000000000000000000006329 203.0
DYD1_k127_3790631_0 Catalyzes the reduction of ribonucleotides to deoxyribonucleotides. May function to provide a pool of deoxyribonucleotide precursors for DNA repair during oxygen limitation and or for immediate growth after restoration of oxygen K00525 - 1.17.4.1 1.345e-203 667.0
DYD1_k127_3790631_1 DNA ligase that catalyzes the formation of phosphodiester linkages between 5'-phosphoryl and 3'-hydroxyl groups in double-stranded DNA using NAD as a coenzyme and as the energy source for the reaction. It is essential for DNA replication and repair of damaged DNA K01972 GO:0003674,GO:0003824,GO:0003909,GO:0003911,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006139,GO:0006259,GO:0006266,GO:0006281,GO:0006284,GO:0006288,GO:0006725,GO:0006807,GO:0006950,GO:0006974,GO:0008150,GO:0008152,GO:0009987,GO:0016874,GO:0016886,GO:0033554,GO:0034641,GO:0043170,GO:0044237,GO:0044238,GO:0044260,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0050896,GO:0051103,GO:0051716,GO:0071704,GO:0090304,GO:0140097,GO:1901360 6.5.1.2 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000225 594.0
DYD1_k127_3790631_2 arylsulfatase A - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000673 360.0
DYD1_k127_3790631_3 peroxiredoxin activity - - - 0.0000000000000000000000000000000000534 149.0
DYD1_k127_3790631_4 chaperone-mediated protein folding - - - 0.00000000000000000000000000000001047 136.0
DYD1_k127_3790631_6 ParE toxin of type II toxin-antitoxin system, parDE K06218 - - 0.00000000000000308 79.0
DYD1_k127_3790631_7 Domain of unknown function (DU1801) - - - 0.000001025 56.0
DYD1_k127_3790631_8 Belongs to the GSP D family K02453 - - 0.000008327 50.0
DYD1_k127_3795805_0 UDP binding domain K00066 - 1.1.1.132 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001106 475.0
DYD1_k127_3795805_1 Oxidoreductase family, C-terminal alpha/beta domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009788 344.0
DYD1_k127_3795805_2 transferase activity, transferring glycosyl groups - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004791 317.0
DYD1_k127_3795805_3 - - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000001295 300.0
DYD1_k127_3795805_4 lipolytic protein G-D-S-L family - - - 0.00000005209 63.0
DYD1_k127_3799857_0 capsule polysaccharide K07265 - - 0.00000000000000000000000000000000000000008479 169.0
DYD1_k127_3799857_1 Hexapeptide repeat of succinyl-transferase K00661 - 2.3.1.79 0.0000000000000000000001637 112.0
DYD1_k127_3799857_2 Glycosyltransferase family 87 - - - 0.000000000000000000001133 104.0
DYD1_k127_3799857_3 Glycosyl transferase family 2 K20444 - - 0.00000000000000003257 92.0
DYD1_k127_3799857_4 Glycosyl transferases group 1 - - - 0.0000000000002099 81.0
DYD1_k127_381030_0 TIGRFAM ribonuclease, Rne Rng family K08300 - 3.1.26.12 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000124 532.0
DYD1_k127_381030_1 General (non sugar-specific) component of the phosphoenolpyruvate-dependent sugar phosphotransferase system (sugar PTS). This major carbohydrate active-transport system catalyzes the phosphorylation of incoming sugar substrates concomitantly with their translocation across the cell membrane. Enzyme I transfers the phosphoryl group from phosphoenolpyruvate (PEP) to the phosphoryl carrier protein (HPr) K08483 - 2.7.3.9 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001015 476.0
DYD1_k127_381030_2 A type II topoisomerase that negatively supercoils closed circular double-stranded (ds) DNA in an ATP-dependent manner to modulate DNA topology and maintain chromosomes in an underwound state. Negative supercoiling favors strand separation, and DNA replication, transcription, recombination and repair, all of which involve strand separation. Also able to catalyze the interconversion of other topological isomers of dsDNA rings, including catenanes and knotted rings. Type II topoisomerases break and join 2 DNA strands simultaneously in an ATP-dependent manner K02469 - 5.99.1.3 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006261 320.0
DYD1_k127_381030_3 PFAM phosphoenolpyruvate-dependent sugar phosphotransferase system EIIA 2 K02768,K02806 - 2.7.1.202 0.0000000000000000000000000000000000000000002468 162.0
DYD1_k127_381030_4 Phosphoribosyl transferase domain - - - 0.0000000000000000000000004509 114.0
DYD1_k127_381030_5 Uncharacterized protein conserved in bacteria (DUF2344) - - - 0.0000000000000000000007077 103.0
DYD1_k127_381030_6 PTS HPr component phosphorylation site K11189 - - 0.0000000000000007282 83.0
DYD1_k127_381030_7 bacterial-type flagellum-dependent cell motility K02388 - - 0.0000002273 58.0
DYD1_k127_381030_8 Required for dimerization of active 70S ribosomes into 100S ribosomes in stationary phase K05808 - - 0.00006391 50.0
DYD1_k127_3811130_0 NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be a menaquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient K00333 - 1.6.5.3 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001292 439.0
DYD1_k127_3811130_1 chorismate mutase K14170 - 4.2.1.51,5.4.99.5 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007157 357.0
DYD1_k127_3811130_2 Histidine kinase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000958 273.0
DYD1_k127_3811130_3 response regulator receiver - - - 0.00000000000000000000000000000000000000000000000000000000000000000000001649 247.0
DYD1_k127_3811130_4 NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient K00332 - 1.6.5.3 0.000000000000000000000000000000000000001181 155.0
DYD1_k127_3811130_5 PIN domain - - - 0.00000000000000000000000000162 116.0
DYD1_k127_3811130_6 Sugar transferase - - - 0.00000000000000000000000003428 119.0
DYD1_k127_3811130_7 Kelch motif - - - 0.0000000000000001021 87.0
DYD1_k127_3811130_8 Putative restriction endonuclease - - - 0.00000004778 62.0
DYD1_k127_3811130_9 regulator - - - 0.00002536 53.0
DYD1_k127_3824248_0 Amidase - - - 0.0000000000000000000000001954 114.0
DYD1_k127_3831891_0 Catalyzes the removal of elemental sulfur and selenium atoms from L-cysteine, L-cystine, L-selenocysteine, and L- selenocystine to produce L-alanine - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000008931 274.0
DYD1_k127_3831891_1 Peptidase dimerisation domain - - - 0.0000000000000000003999 89.0
DYD1_k127_3878888_0 Type II/IV secretion system protein K02454 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000005239 277.0
DYD1_k127_3878888_1 PFAM Bacterial type II secretion system protein F domain K02653 - - 0.0000000000000000000000000107 121.0
DYD1_k127_3878888_2 ECF sigma factor K03088 - - 0.000002466 57.0
DYD1_k127_3898649_0 Participates in both transcription termination and antitermination K02600 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003536 485.0
DYD1_k127_3898649_1 ABC-type multidrug transport system ATPase component - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001589 394.0
DYD1_k127_3898649_2 TOBE domain K10112 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007178 327.0
DYD1_k127_3898649_3 Barrel-sandwich domain of CusB or HlyD membrane-fusion - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000006054 292.0
DYD1_k127_3898649_4 ABC-type multidrug transport system ATPase component - - - 0.000000000000000000000000000000000000000000002747 170.0
DYD1_k127_3898649_5 One of the essential components for the initiation of protein synthesis. Protects formylmethionyl-tRNA from spontaneous hydrolysis and promotes its binding to the 30S ribosomal subunits. Also involved in the hydrolysis of GTP during the formation of the 70S ribosomal complex K02519 - - 0.00006949 48.0
DYD1_k127_3903916_0 Couples transcription and DNA repair by recognizing RNA polymerase (RNAP) stalled at DNA lesions. Mediates ATP-dependent release of RNAP and its truncated transcript from the DNA, and recruitment of nucleotide excision repair machinery to the damaged site K03723 - - 1.96e-206 650.0
DYD1_k127_3903916_1 dithiol-disulfide isomerase involved in polyketide biosynthesis K01829 - 5.3.4.1 0.0000000001173 63.0
DYD1_k127_3926604_0 Methyltransferase domain - - - 0.000000000000000000000000000000000000000000000002078 183.0
DYD1_k127_3926604_1 Bacterial membrane protein YfhO - - - 0.000000000000000000000000007016 128.0
DYD1_k127_3935409_0 Calcineurin-like phosphoesterase superfamily domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004032 585.0
DYD1_k127_3935409_1 Sulfatase - - - 0.0000000000000000000000000000000000000001373 157.0
DYD1_k127_3935409_2 PFAM Cupin 2 conserved barrel domain protein K21700 - - 0.0000000000000000000000000000000000004646 142.0
DYD1_k127_3935409_3 Pyridoxamine 5'-phosphate oxidase K07006 - - 0.000000000000000000000000000001222 126.0
DYD1_k127_3935409_4 Key enzyme in the regulation of glycerol uptake and metabolism. Catalyzes the phosphorylation of glycerol to yield sn- glycerol 3-phosphate K00864 GO:0003674,GO:0003824,GO:0004370,GO:0005975,GO:0006066,GO:0006071,GO:0006793,GO:0006796,GO:0008150,GO:0008152,GO:0009987,GO:0016301,GO:0016310,GO:0016740,GO:0016772,GO:0016773,GO:0019400,GO:0019751,GO:0044237,GO:0044238,GO:0044262,GO:0044281,GO:0071704,GO:1901615 2.7.1.30 0.000000000000000000000000246 115.0
DYD1_k127_3936353_0 acetylesterase activity K01046 - 3.1.1.3 0.000000000000000000000000000000000000000000000003933 179.0
DYD1_k127_3936353_1 Ribosomal protein L11 methyltransferase (PrmA) - - - 0.000000000000000000000000000000000000000000001727 171.0
DYD1_k127_3939068_0 protein (some members contain a von Willebrand factor type A (vWA) domain - - - 0.0000000000000000000000000000000000000000003012 166.0
DYD1_k127_3939068_1 Aerotolerance regulator N-terminal - - - 0.00000000000000001388 95.0
DYD1_k127_3954491_0 Domain of Unknown Function with PDB structure (DUF3857) - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000135 380.0
DYD1_k127_3954491_1 Nucleic acid binding K03698 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000005275 280.0
DYD1_k127_3954491_2 Domain of Unknown Function with PDB structure (DUF3857) - - - 0.0000007174 62.0
DYD1_k127_3955314_0 Catalyzes the formation of the alpha-1,6-glucosidic linkages in glycogen by scission of a 1,4-alpha-linked oligosaccharide from growing alpha-1,4-glucan chains and the subsequent attachment of the oligosaccharide to the alpha-1,6 position K00700 - 2.4.1.18 1.294e-230 739.0
DYD1_k127_3955314_1 Has an important function as a repair enzyme for proteins that have been inactivated by oxidation. Catalyzes the reversible oxidation-reduction of methionine sulfoxide in proteins to methionine K07305,K12267 - 1.8.4.11,1.8.4.12 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000001446 301.0
DYD1_k127_3955314_2 Uncharacterized ACR, COG1993 K09137 - - 0.000000000000000000000000000000000000000000001214 168.0
DYD1_k127_3955314_3 RNA recognition motif - - - 0.0000000000000000000000000000001629 128.0
DYD1_k127_3955314_4 Important for reducing fluoride concentration in the cell, thus reducing its toxicity K06199 GO:0003674,GO:0005215,GO:0005575,GO:0005623,GO:0005886,GO:0005887,GO:0006810,GO:0006811,GO:0006820,GO:0008150,GO:0008509,GO:0015075,GO:0015103,GO:0015318,GO:0015698,GO:0016020,GO:0016021,GO:0022857,GO:0031224,GO:0031226,GO:0034220,GO:0044425,GO:0044459,GO:0044464,GO:0051179,GO:0051234,GO:0055085,GO:0071944,GO:0098656,GO:0098660,GO:0098661,GO:1903424,GO:1903425 - 0.00000000000000000000000001452 115.0
DYD1_k127_396336_0 Cytidylyltransferase-like - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000005998 271.0
DYD1_k127_396336_1 ABC transporter K01990,K21397 - - 0.00000843 57.0
DYD1_k127_3968914_0 ATPase activity - - - 0.000000000000004135 89.0
DYD1_k127_3968914_1 Serine threonine protein kinase K12132 - 2.7.11.1 0.000000000001798 71.0
DYD1_k127_397925_0 DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates K03043 GO:0000428,GO:0005575,GO:0005622,GO:0005623,GO:0030880,GO:0032991,GO:0044424,GO:0044464,GO:0061695,GO:1902494,GO:1990234 2.7.7.6 0.0 1565.0
DYD1_k127_397925_1 DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates K03046 GO:0000428,GO:0005575,GO:0005622,GO:0005623,GO:0030880,GO:0032991,GO:0044424,GO:0044464,GO:0061695,GO:1902494,GO:1990234 2.7.7.6 0.0000000000000000000000000000000000000000000000000000000000000000000001056 239.0
DYD1_k127_397925_2 Response regulator receiver - - - 0.000000000000002728 78.0
DYD1_k127_3983351_0 Belongs to the aldehyde dehydrogenase family K13821 - 1.2.1.88,1.5.5.2 8.559e-210 680.0
DYD1_k127_3998957_0 PFAM Band 7 protein - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000002051 300.0
DYD1_k127_3998957_1 stress-induced mitochondrial fusion - - - 0.000000000000000000000000000000002155 141.0
DYD1_k127_4016631_0 Heat shock 70 kDa protein K04043 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004257 354.0
DYD1_k127_4016631_1 PFAM blue (type 1) copper domain protein - - - 0.0000000000000000000000000000000000000000000283 166.0
DYD1_k127_4016631_2 Lysylphosphatidylglycerol synthase TM region K07027 - - 0.00000000000009287 83.0
DYD1_k127_4016631_3 Acetyltransferase (GNAT) domain - - - 0.000000000000374 76.0
DYD1_k127_4034742_0 Type II secretion system (T2SS), protein K - - - 0.000000000000000000000000000000000000000000000045 191.0
DYD1_k127_4034742_1 PFAM Fimbrial assembly family protein - - - 0.000000000000000007753 98.0
DYD1_k127_4034742_2 General secretion pathway protein - - - 0.000001308 59.0
DYD1_k127_404557_0 Sulfate transporter family - - - 0.000000000000000000000000000000000000000000000000000000000000000000000003454 249.0
DYD1_k127_404557_1 (ABC) transporter K06857 - 3.6.3.55 0.00001274 51.0
DYD1_k127_404557_2 Planctomycete cytochrome C - - - 0.00003421 49.0
DYD1_k127_4064134_0 Permease component - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003104 341.0
DYD1_k127_4064134_1 TGS domain K06944 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000003124 267.0
DYD1_k127_4064134_10 Reprolysin (M12B) family zinc metalloprotease - - - 0.00007427 56.0
DYD1_k127_4064134_11 Clostripain family - - - 0.0003971 52.0
DYD1_k127_4064134_2 ABC-type transport system involved in lysophospholipase L1 biosynthesis ATPase component K02003 - - 0.000000000000000000000000000000000000000000000000000000000000000000000009727 251.0
DYD1_k127_4064134_3 PFAM Aminotransferase class I and II K00812,K10907 - 2.6.1.1 0.0000000000000000000000000000000000000000000000000001848 190.0
DYD1_k127_4064134_4 Zinc-uptake complex component A periplasmic K09815 - - 0.000000000000000000000000000000000000000000000000000268 197.0
DYD1_k127_4064134_5 - - - - 0.00000000000000000000000000000000000000005846 169.0
DYD1_k127_4064134_6 Rubrerythrin K22336 - 1.16.3.1 0.0000000000000000000000000000000004983 136.0
DYD1_k127_4064134_7 self proteolysis - - - 0.000000000000000000000844 112.0
DYD1_k127_4064134_9 Dolichyl-phosphate-mannose-protein mannosyltransferase - - - 0.0000004217 63.0
DYD1_k127_4118329_0 His Kinase A (phosphoacceptor) domain - - - 0.00000000000000000000000000000000000000000000002482 185.0
DYD1_k127_4118329_1 protein trimerization K20543 - - 0.000000002129 64.0
DYD1_k127_412947_0 Along with HypE, it catalyzes the synthesis of the CN ligands of the active site iron of NiFe -hydrogenases using carbamoylphosphate as a substrate. It functions as a carbamoyl transferase using carbamoylphosphate as a substrate and transferring the carboxamido moiety in an ATP-dependent reaction to the thiolate of the C-terminal cysteine of HypE yielding a protein-S-carboxamide K04656 - - 0.000000000000000000000000000000000000000000000000000000000000006021 231.0
DYD1_k127_412947_2 Carbohydrate-selective porin, OprB family K07267 - - 0.00000046 61.0
DYD1_k127_4136191_0 PFAM AMP-dependent synthetase and ligase K01897 - 6.2.1.3 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004426 531.0
DYD1_k127_4136191_1 Protein-L-isoaspartate(D-aspartate) O-methyltransferase (PCMT) - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000006779 251.0
DYD1_k127_4136191_2 Catalyzes the reversible phosphatidyl group transfer from one phosphatidylglycerol molecule to another to form cardiolipin (CL) (diphosphatidylglycerol) and glycerol K06131 - - 0.0000000000000000000000000000000000000000001335 165.0
DYD1_k127_4140144_0 Belongs to the peptidase S26 family K03100 - 3.4.21.89 0.0000000000000000000000000000000000000000000001985 188.0
DYD1_k127_4140144_1 One of the essential components for the initiation of protein synthesis. Protects formylmethionyl-tRNA from spontaneous hydrolysis and promotes its binding to the 30S ribosomal subunits. Also involved in the hydrolysis of GTP during the formation of the 70S ribosomal complex K02519 - - 0.000000002251 59.0
DYD1_k127_4174279_0 ABC transporter, transmembrane region K06147,K11085 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000964 378.0
DYD1_k127_4174279_1 - - - - 0.00000000000000000000000000000000000000000000000000000000000000000001144 249.0
DYD1_k127_4174279_2 HDOD domain - - - 0.000000000000000000000000000000000000000000000000000000001339 211.0
DYD1_k127_4182853_0 TIGRFAM RNA polymerase sigma factor, sigma-70 family K03088 - - 0.00000000000000000002284 98.0
DYD1_k127_4182853_1 Acid phosphatase homologues - - - 0.0000000000001691 78.0
DYD1_k127_4213401_0 PEP-CTERM motif - - - 0.000000000000000000000000000000000000000001855 168.0
DYD1_k127_4213401_1 PFAM Transmembrane exosortase (Exosortase_EpsH) - - - 0.00000000000000000000000000000000004105 147.0
DYD1_k127_4213401_2 Protein of unknown function (DUF3485) - - - 0.000000001434 67.0
DYD1_k127_4215862_0 Peptidase S8 and S53 subtilisin kexin sedolisin - - - 0.0000000000000000000000000001168 132.0
DYD1_k127_4215862_1 PFAM Proprotein convertase P - - - 0.000000000000000004205 100.0
DYD1_k127_4218309_0 - - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000005668 294.0
DYD1_k127_4218309_1 Protein of unknown function (DUF1501) - - - 0.0000000000000000000000000001726 117.0
DYD1_k127_4218390_0 Mandelate racemase / muconate lactonizing enzyme, C-terminal domain K19802 - 5.1.1.20 0.000000000000000000000000000000000000000000000000000000000000000000000000000000003847 282.0
DYD1_k127_4218390_1 Ribonuclease H K03469 - 3.1.26.4 0.00000000000000000000000000004237 121.0
DYD1_k127_4218390_2 Thioredoxin - - - 0.00000000000000000000000426 117.0
DYD1_k127_4218390_3 Major facilitator Superfamily - - - 0.00000000000001639 74.0
DYD1_k127_4218390_4 C4-type zinc ribbon domain K07164 - - 0.0000000000908 72.0
DYD1_k127_4218390_5 purine nucleotide biosynthetic process K02103,K05499 - - 0.000000002064 69.0
DYD1_k127_4234916_0 Belongs to the beta-ketoacyl-ACP synthases family - - - 8.043e-284 912.0
DYD1_k127_4234916_1 Belongs to the class-I aminoacyl-tRNA synthetase family K01883 GO:0000166,GO:0003674,GO:0003824,GO:0004812,GO:0004817,GO:0005488,GO:0005524,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006082,GO:0006139,GO:0006399,GO:0006412,GO:0006418,GO:0006423,GO:0006518,GO:0006520,GO:0006725,GO:0006807,GO:0008144,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0016070,GO:0016874,GO:0016875,GO:0017076,GO:0019538,GO:0019752,GO:0030554,GO:0032553,GO:0032555,GO:0032559,GO:0034641,GO:0034645,GO:0034660,GO:0035639,GO:0036094,GO:0043038,GO:0043039,GO:0043043,GO:0043167,GO:0043168,GO:0043170,GO:0043436,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044281,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0071704,GO:0090304,GO:0097159,GO:0097367,GO:0140098,GO:0140101,GO:1901265,GO:1901360,GO:1901363,GO:1901564,GO:1901566,GO:1901576 6.1.1.16 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001363 497.0
DYD1_k127_4234916_2 Catalyzes the stereoinversion of LL-2,6- diaminoheptanedioate (L,L-DAP) to meso-diaminoheptanedioate (meso- DAP), a precursor of L-lysine and an essential component of the bacterial peptidoglycan K01778 - 5.1.1.7 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002073 312.0
DYD1_k127_4234916_3 Involved in the biosynthesis of isopentenyl diphosphate (IPP) and dimethylallyl diphosphate (DMAPP), two major building blocks of isoprenoid compounds. Catalyzes the conversion of 4- diphosphocytidyl-2-C-methyl-D-erythritol 2-phosphate (CDP-ME2P) to 2-C-methyl-D-erythritol 2,4-cyclodiphosphate (ME-CPP) with a corresponding release of cytidine 5-monophosphate (CMP) K01770 - 4.6.1.12 0.0000000000000000000000000000000000000000001453 164.0
DYD1_k127_4234916_4 Nuclease that resolves Holliday junction intermediates in genetic recombination. Cleaves the cruciform structure in supercoiled DNA by nicking to strands with the same polarity at sites symmetrically opposed at the junction in the homologous arms and leaves a 5'-terminal phosphate and a 3'-terminal hydroxyl group K01159 GO:0000725,GO:0003674,GO:0003824,GO:0004518,GO:0004519,GO:0004520,GO:0004536,GO:0005575,GO:0005622,GO:0005623,GO:0006139,GO:0006259,GO:0006260,GO:0006261,GO:0006281,GO:0006310,GO:0006725,GO:0006807,GO:0006950,GO:0006974,GO:0008150,GO:0008152,GO:0008821,GO:0009058,GO:0009059,GO:0009987,GO:0016787,GO:0016788,GO:0016889,GO:0016894,GO:0031297,GO:0032991,GO:0033554,GO:0034641,GO:0034645,GO:0043170,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044424,GO:0044464,GO:0045005,GO:0046483,GO:0048476,GO:0050896,GO:0051716,GO:0071704,GO:0071932,GO:0090304,GO:0090305,GO:0140097,GO:1901360,GO:1901576 3.1.22.4 0.000000000000000000000000000000000000000002295 162.0
DYD1_k127_4234916_5 The RuvA-RuvB complex in the presence of ATP renatures cruciform structure in supercoiled DNA with palindromic sequence, indicating that it may promote strand exchange reactions in homologous recombination. RuvAB is a helicase that mediates the Holliday junction migration by localized denaturation and reannealing. RuvA stimulates, in the presence of DNA, the weak ATPase activity of RuvB K03550 - 3.6.4.12 0.000000003464 64.0
DYD1_k127_4245984_0 Succinyl-CoA synthetase functions in the citric acid cycle (TCA), coupling the hydrolysis of succinyl-CoA to the synthesis of either ATP or GTP and thus represents the only step of substrate-level phosphorylation in the TCA. The beta subunit provides nucleotide specificity of the enzyme and binds the substrate succinate, while the binding sites for coenzyme A and phosphate are found in the alpha subunit K01903 GO:0003674,GO:0003824,GO:0004774,GO:0004775,GO:0006082,GO:0006091,GO:0006099,GO:0006101,GO:0008150,GO:0008152,GO:0009060,GO:0009987,GO:0015980,GO:0016874,GO:0016877,GO:0016878,GO:0016999,GO:0017144,GO:0019752,GO:0043436,GO:0044237,GO:0044238,GO:0044281,GO:0045333,GO:0055114,GO:0071704,GO:0072350 6.2.1.5 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003208 381.0
DYD1_k127_4245984_1 Belongs to the citrate synthase family K01647 - 2.3.3.1 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003383 363.0
DYD1_k127_4245984_2 PFAM SMC domain protein - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003443 317.0
DYD1_k127_4245984_3 Domain of unknown function (DUF4276) - - - 0.0000000000000000000000000000008305 128.0
DYD1_k127_4245984_4 Mut7-C RNAse domain K00525 - 1.17.4.1 0.0000000000000000003326 90.0
DYD1_k127_4245984_5 TIGRFAM DNA polymerase III, alpha subunit K02337 - 2.7.7.7 0.000000000000000004623 86.0
DYD1_k127_4245984_6 TOBE domain - - - 0.0000002911 56.0
DYD1_k127_4256509_0 Protein tyrosine kinase K12132 - 2.7.11.1 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000536 477.0
DYD1_k127_4256509_1 ECF sigma factor - - - 0.0000000000000000000001918 98.0
DYD1_k127_4274372_0 Endoribonuclease that initiates mRNA decay K18682 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004426 531.0
DYD1_k127_4274372_1 Disulphide bond corrector protein DsbC K04084 - 1.8.1.8 0.000000000000000000000000161 117.0
DYD1_k127_4274372_2 PFAM Cytochrome C assembly protein - - - 0.000000000000000000000002146 119.0
DYD1_k127_4274372_3 ResB-like family - - - 0.0001115 55.0
DYD1_k127_4287045_0 Predicted membrane protein (DUF2339) - - - 0.000000000002206 71.0
DYD1_k127_4287045_1 Belongs to the sigma-70 factor family. ECF subfamily K03088 - - 0.0002999 44.0
DYD1_k127_4299429_0 Aldehyde dehydrogenase family - - - 7.765e-208 667.0
DYD1_k127_4299429_1 Plays an important role in the de novo pathway of purine nucleotide biosynthesis. Catalyzes the first committed step in the biosynthesis of AMP from IMP K01939 GO:0003674,GO:0003824,GO:0004019,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006139,GO:0006163,GO:0006164,GO:0006167,GO:0006725,GO:0006753,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009117,GO:0009123,GO:0009124,GO:0009126,GO:0009127,GO:0009150,GO:0009152,GO:0009156,GO:0009161,GO:0009165,GO:0009167,GO:0009168,GO:0009259,GO:0009260,GO:0009987,GO:0016874,GO:0016879,GO:0017144,GO:0018130,GO:0019438,GO:0019637,GO:0019693,GO:0034641,GO:0034654,GO:0044208,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0044424,GO:0044464,GO:0046033,GO:0046040,GO:0046390,GO:0046483,GO:0055086,GO:0071704,GO:0072521,GO:0072522,GO:0090407,GO:1901135,GO:1901137,GO:1901293,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576 6.3.4.4 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001586 438.0
DYD1_k127_4299429_10 Catalyzes the condensation of isopentenyl diphosphate (IPP) with allylic pyrophosphates generating different type of terpenoids K00806 GO:0002094,GO:0003674,GO:0003824,GO:0004659,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006066,GO:0006629,GO:0006720,GO:0008150,GO:0008152,GO:0008299,GO:0008610,GO:0009058,GO:0009987,GO:0016093,GO:0016094,GO:0016740,GO:0016765,GO:0044237,GO:0044238,GO:0044249,GO:0044255,GO:0044281,GO:0044283,GO:0044424,GO:0044444,GO:0044464,GO:0046165,GO:0071704,GO:1901576,GO:1901615,GO:1901617 2.5.1.31 0.0003314 43.0
DYD1_k127_4299429_2 Catalyzes the attachment of tyrosine to tRNA(Tyr) in a two-step reaction tyrosine is first activated by ATP to form Tyr- AMP and then transferred to the acceptor end of tRNA(Tyr) K01866 GO:0003674,GO:0003824,GO:0004812,GO:0004831,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006082,GO:0006139,GO:0006399,GO:0006520,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0009987,GO:0016070,GO:0016874,GO:0016875,GO:0019752,GO:0034641,GO:0034660,GO:0043038,GO:0043039,GO:0043170,GO:0043436,GO:0044237,GO:0044238,GO:0044281,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0071704,GO:0090304,GO:0140098,GO:0140101,GO:1901360,GO:1901564 6.1.1.1 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005633 377.0
DYD1_k127_4299429_3 serine O-acetyltransferase K00640 - 2.3.1.30 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002038 342.0
DYD1_k127_4299429_4 Catalyzes the condensation of isopentenyl diphosphate (IPP) with allylic pyrophosphates generating different type of terpenoids K00806 GO:0002094,GO:0003674,GO:0003824,GO:0004659,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006066,GO:0006629,GO:0006720,GO:0008150,GO:0008152,GO:0008299,GO:0008610,GO:0009058,GO:0009987,GO:0016093,GO:0016094,GO:0016740,GO:0016765,GO:0044237,GO:0044238,GO:0044249,GO:0044255,GO:0044281,GO:0044283,GO:0044424,GO:0044444,GO:0044464,GO:0046165,GO:0071704,GO:1901576,GO:1901615,GO:1901617 2.5.1.31 0.000000000000000000000000000000000000000000000000000000000000000000000001285 250.0
DYD1_k127_4299429_5 Assembles around the rod to form the L-ring and probably protects the motor basal body from shearing forces during rotation - - - 0.00000000000000000000000000000000003937 153.0
DYD1_k127_4299429_6 synthase K01737 - 4.1.2.50,4.2.3.12 0.00000000000000000000000000000000008135 147.0
DYD1_k127_4299429_7 Hep Hag repeat protein - - - 0.0000000000000000000002808 104.0
DYD1_k127_4299429_8 Protein of unknown function (DUF3750) - - - 0.0000000000003096 76.0
DYD1_k127_4299429_9 DNA-templated transcription, initiation K03088 - - 0.000005354 55.0
DYD1_k127_4303798_0 Non-canonical ABC transporter that contains transmembrane domains (TMD), which form a pore in the membrane, and an ATP-binding domain (NBD), which is responsible for energy generation. Confers resistance against macrolides K02003 - - 0.000000000000000000000000000000000000000000000000000000000000005583 223.0
DYD1_k127_4303798_1 MacB-like periplasmic core domain K02004 - - 0.000000000000001142 92.0
DYD1_k127_4304223_0 Belongs to the UDP-glucose GDP-mannose dehydrogenase family K00012 - 1.1.1.22 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001351 525.0
DYD1_k127_4304223_1 FtsX-like permease family - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001242 525.0
DYD1_k127_4304223_2 UDP-N-acetylglucosamine 2-epimerase K01791 - 5.1.3.14 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007063 422.0
DYD1_k127_4304223_3 Polysaccharide biosynthesis protein K08679 - 5.1.3.6 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008686 351.0
DYD1_k127_4304223_4 PFAM Class II aldolase adducin K01628 - 4.1.2.17 0.000000000000000000000000000000000000000000000000000007063 199.0
DYD1_k127_4311283_0 it binds specifically double-stranded DNA at a 9 bp consensus (dnaA box) 5'-TTATC CA A CA A-3'. DnaA binds to ATP and to acidic phospholipids K02313 GO:0003674,GO:0003676,GO:0003677,GO:0003688,GO:0003690,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005886,GO:0006139,GO:0006259,GO:0006260,GO:0006261,GO:0006270,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0016020,GO:0034641,GO:0034645,GO:0042802,GO:0043170,GO:0043565,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044424,GO:0044464,GO:0046483,GO:0071704,GO:0071944,GO:0090304,GO:0097159,GO:1901360,GO:1901363,GO:1901576,GO:1990837 - 0.0000000000000000000000000000000000000000000000000000000000000000006048 243.0
DYD1_k127_4311283_1 acetyltransferase - - - 0.000000002229 61.0
DYD1_k127_4321842_0 Periplasmic binding proteins and sugar binding domain of LacI family - - - 0.00000000000000000000000000000000000000000000000000000000000000000000008744 252.0
DYD1_k127_4321842_1 monosaccharide-transporting ATPase activity K10441 - 3.6.3.17 0.000000000000000000000000000000000000000005219 160.0
DYD1_k127_4321842_2 Glycosyl hydrolases family 39 - - - 0.00000000000000000004289 105.0
DYD1_k127_4330522_0 ATP binding to DnaK triggers the release of the substrate protein, thus completing the reaction cycle. Several rounds of ATP-dependent interactions between DnaJ, DnaK and GrpE are required for fully efficient folding. Also involved, together with DnaK and GrpE, in the DNA replication of plasmids through activation of initiation proteins K03686 - - 0.000000000000000000000000000000000000000000000000000005016 196.0
DYD1_k127_4330522_1 Participates actively in the response to hyperosmotic and heat shock by preventing the aggregation of stress-denatured proteins, in association with DnaK and GrpE. It is the nucleotide exchange factor for DnaK and may function as a thermosensor. Unfolded proteins bind initially to DnaJ K03687 GO:0000166,GO:0000774,GO:0001871,GO:0003674,GO:0005488,GO:0005515,GO:0005575,GO:0005623,GO:0008150,GO:0009986,GO:0017076,GO:0030234,GO:0030246,GO:0030247,GO:0030554,GO:0036094,GO:0044464,GO:0050790,GO:0051082,GO:0060589,GO:0060590,GO:0065007,GO:0065009,GO:0097159,GO:0098772,GO:1901265,GO:1901363,GO:2001065 - 0.000000000000000000000000007841 119.0
DYD1_k127_4330522_2 - - - - 0.00000000000000000000005387 113.0
DYD1_k127_4330522_3 Regulatory protein, FmdB family - - - 0.000000000000000000006441 97.0
DYD1_k127_4338304_0 peptidyl-tyrosine sulfation - - - 0.000000003083 70.0
DYD1_k127_4346379_0 Belongs to the lyase 1 family. Adenylosuccinate lyase subfamily K01756 - 4.3.2.2 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006948 540.0
DYD1_k127_4346379_1 Digests double-stranded RNA. Involved in the processing of primary rRNA transcript to yield the immediate precursors to the large and small rRNAs (23S and 16S). Processes some mRNAs, and tRNAs when they are encoded in the rRNA operon. Processes pre- crRNA and tracrRNA of type II CRISPR loci if present in the organism K03685 GO:0003674,GO:0003676,GO:0003723,GO:0003725,GO:0003824,GO:0004518,GO:0004519,GO:0004521,GO:0004525,GO:0004540,GO:0005488,GO:0006139,GO:0006396,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0009987,GO:0010467,GO:0016070,GO:0016787,GO:0016788,GO:0016891,GO:0016893,GO:0032296,GO:0034641,GO:0043170,GO:0044237,GO:0044238,GO:0046483,GO:0071704,GO:0090304,GO:0090305,GO:0090501,GO:0090502,GO:0097159,GO:0140098,GO:1901360,GO:1901363 3.1.26.3 0.0000000000000000000000000000000000000000000000000000000000000000000000001593 256.0
DYD1_k127_4346379_2 Responsible for synthesis of pseudouridine from uracil- 13 in transfer RNAs K06176 GO:0001522,GO:0003674,GO:0003824,GO:0006139,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0009451,GO:0009982,GO:0009987,GO:0016070,GO:0016853,GO:0016866,GO:0034641,GO:0043170,GO:0043412,GO:0044237,GO:0044238,GO:0046483,GO:0071704,GO:0090304,GO:1901360 5.4.99.27 0.000000000000000000000000000000000000000000000002132 187.0
DYD1_k127_4346379_3 Catalyzes the transfer of a ribosyl phosphate group from 5-phosphoribose 1-diphosphate to orotate, leading to the formation of orotidine monophosphate (OMP) K00762 - 2.4.2.10 0.000000000000000000000000000000000000000000008376 168.0
DYD1_k127_4348458_0 sulfate adenylyltransferase K00958 - 2.7.7.4 0.00000000000000000000000000000000000000000000000000000000000000001954 226.0
DYD1_k127_4348458_1 Catalyzes the ATP-dependent conversion of 7-carboxy-7- deazaguanine (CDG) to 7-cyano-7-deazaguanine (preQ(0)) K06920 - 6.3.4.20 0.000000000000000000000000000000000003081 148.0
DYD1_k127_4348458_2 Belongs to the multicopper oxidase YfiH RL5 family K05810 - - 0.000000000000000000000003781 106.0
DYD1_k127_4352849_0 PFAM Sulfotransferase domain - - - 0.000000000000000000000000000000000000000000001152 177.0
DYD1_k127_4352849_1 Membrane protein involved in the export of O-antigen and teichoic acid K03328 - - 0.00000000000000000000000000000000000000000007822 179.0
DYD1_k127_4352849_2 Glycosyltransferase like family 2 - - - 0.000000000000000000000000000001588 134.0
DYD1_k127_4352849_3 O-linked N-acetylglucosamine transferase SPINDLY family - - - 0.0000000000001857 79.0
DYD1_k127_4352849_4 transferase activity, transferring glycosyl groups - - - 0.000000000005535 76.0
DYD1_k127_4361132_0 - Amino acid transport and metabolism K01953 - 6.3.5.4 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004789 450.0
DYD1_k127_4361132_1 polysaccharide deacetylase - - - 0.000000000000000000000000000000000005151 150.0
DYD1_k127_4361132_2 glycosyl transferase group 1 - - - 0.00000000000000000002306 98.0
DYD1_k127_4365468_1 best DB hits PFAM PF00114 - - - 0.0000000000000000000000000000000000000000000000001193 191.0
DYD1_k127_4369256_0 domain, Protein - - - 0.0000000000000000001119 104.0
DYD1_k127_4401500_0 Protein conserved in bacteria - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002555 399.0
DYD1_k127_4401500_1 Belongs to the D-alanine--D-alanine ligase family K01921 - 6.3.2.4 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001266 373.0
DYD1_k127_4401500_2 Condenses 4-methyl-5-(beta-hydroxyethyl)thiazole monophosphate (THZ-P) and 2-methyl-4-amino-5-hydroxymethyl pyrimidine pyrophosphate (HMP-PP) to form thiamine monophosphate (TMP) K00788 GO:0003674,GO:0003824,GO:0004789,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006725,GO:0006766,GO:0006767,GO:0006772,GO:0006790,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009110,GO:0009228,GO:0009987,GO:0016740,GO:0016765,GO:0017144,GO:0018130,GO:0019438,GO:0034641,GO:0042364,GO:0042723,GO:0042724,GO:0044237,GO:0044249,GO:0044271,GO:0044272,GO:0044281,GO:0044283,GO:0044424,GO:0044464,GO:0046483,GO:0071704,GO:0072527,GO:0072528,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576 2.5.1.3 0.000000000000000000000000000000000000000000000000000000000000000001013 246.0
DYD1_k127_4401500_3 peptidase activity, acting on L-amino acid peptides K20276,K21449 - - 0.0000000000000000000000000000000000000000000001476 187.0
DYD1_k127_4401500_4 WD40 repeats - - - 0.000000000000000000001561 109.0
DYD1_k127_4401500_5 HAD-superfamily phosphatase, subfamily IIIC - - - 0.000000000000000000002058 98.0
DYD1_k127_4401500_6 Carrier of the growing fatty acid chain in fatty acid biosynthesis K02078 - - 0.00000002132 58.0
DYD1_k127_4401500_7 calcium- and calmodulin-responsive adenylate cyclase activity - - - 0.000009281 58.0
DYD1_k127_4403259_0 NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient. This subunit may bind ubiquinone K00337 - 1.6.5.3 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002463 324.0
DYD1_k127_4403259_1 NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient K00338 - 1.6.5.3 0.00000000000000000000000000000000000000000000000000000000000004936 220.0
DYD1_k127_4403259_2 NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient K00340 - 1.6.5.3 0.0000000000000000001534 94.0
DYD1_k127_4403259_3 PFAM NADH-ubiquinone plastoquinone oxidoreductase chain 6 K00339 - 1.6.5.3 0.0000000000000000002845 98.0
DYD1_k127_4403259_4 Heat shock 70 kDa protein K04043 - - 0.0000000004588 66.0
DYD1_k127_4421273_0 Catalyzes the NADP-dependent rearrangement and reduction of 1-deoxy-D-xylulose-5-phosphate (DXP) to 2-C-methyl-D-erythritol 4-phosphate (MEP) K00099 GO:0000166,GO:0003674,GO:0003824,GO:0005488,GO:0006081,GO:0006082,GO:0006090,GO:0006629,GO:0006644,GO:0006720,GO:0006721,GO:0006793,GO:0006796,GO:0008150,GO:0008152,GO:0008299,GO:0008610,GO:0008654,GO:0009058,GO:0009240,GO:0009987,GO:0016114,GO:0016491,GO:0016614,GO:0016616,GO:0019288,GO:0019637,GO:0019682,GO:0019752,GO:0030145,GO:0030604,GO:0032787,GO:0036094,GO:0043167,GO:0043168,GO:0043169,GO:0043436,GO:0044237,GO:0044238,GO:0044249,GO:0044255,GO:0044281,GO:0046490,GO:0046872,GO:0046914,GO:0048037,GO:0050661,GO:0050662,GO:0051483,GO:0051484,GO:0055114,GO:0070402,GO:0071704,GO:0090407,GO:0097159,GO:1901135,GO:1901265,GO:1901363,GO:1901576 1.1.1.267 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004313 402.0
DYD1_k127_4421273_1 Dihydropyrimidinase K01464 - 3.5.2.2 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001265 347.0
DYD1_k127_4421273_2 PDZ domain (Also known as DHR K11749 - - 0.00000000000000000000000000000000000000000004864 182.0
DYD1_k127_4427412_0 protein conserved in bacteria - - - 0.000000000021 77.0
DYD1_k127_4430500_0 Belongs to the MtfA family K09933 GO:0003674,GO:0003824,GO:0004177,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006355,GO:0006508,GO:0006807,GO:0008134,GO:0008150,GO:0008152,GO:0008233,GO:0008238,GO:0009889,GO:0010468,GO:0010556,GO:0016787,GO:0019219,GO:0019222,GO:0019538,GO:0031323,GO:0031326,GO:0043170,GO:0043433,GO:0044092,GO:0044238,GO:0044424,GO:0044444,GO:0044464,GO:0048519,GO:0050789,GO:0050794,GO:0051090,GO:0051171,GO:0051252,GO:0060255,GO:0065007,GO:0065009,GO:0070011,GO:0071704,GO:0080090,GO:0140096,GO:1901564,GO:1903506,GO:2000112,GO:2001141 - 0.000000000000000000000000000000000000000000000000000000000000000006963 233.0
DYD1_k127_4430500_1 COG1012 NAD-dependent aldehyde - - - 0.000000000000000000000000000000000000000000000251 173.0
DYD1_k127_4430500_2 Protein of unknown function (DUF433) - - - 0.000000000000000002809 87.0
DYD1_k127_4434954_0 Catalyzes the conversion of acetate into acetyl-CoA (AcCoA), an essential intermediate at the junction of anabolic and catabolic pathways. AcsA undergoes a two-step reaction. In the first half reaction, AcsA combines acetate with ATP to form acetyl-adenylate (AcAMP) intermediate. In the second half reaction, it can then transfer the acetyl group from AcAMP to the sulfhydryl group of CoA, forming the product AcCoA K01895 - 6.2.1.1 0.000000000000000000000000000000000000000000000000000000000000000000000000000000001435 274.0
DYD1_k127_4434954_1 HAD-hyrolase-like - - - 0.00000000000000000000000000009824 124.0
DYD1_k127_4434954_2 - - - - 0.0000000000000000000004409 104.0
DYD1_k127_4445649_0 Uncharacterised protein family UPF0047 - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000006015 250.0
DYD1_k127_4445649_1 chain release factor - - - 0.00000000000000000000000000000000004953 140.0
DYD1_k127_4446671_0 ABC-type multidrug transport system ATPase K01990 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008195 332.0
DYD1_k127_4446671_1 stress-induced mitochondrial fusion K04087 - - 0.00000000000000000000000000000000007902 146.0
DYD1_k127_4446671_2 stress-induced mitochondrial fusion - - - 0.000000000000000000000002374 116.0
DYD1_k127_4446671_3 HflC and HflK could encode or regulate a protease K04088 - - 0.00000000000005361 85.0
DYD1_k127_445616_0 DNA-dependent ATPase involved in processing of recombination intermediates, plays a role in repairing DNA breaks. Stimulates the branch migration of RecA-mediated strand transfer reactions, allowing the 3' invading strand to extend heteroduplex DNA faster. Binds ssDNA in the presence of ADP but not other nucleotides, has ATPase activity that is stimulated by ssDNA and various branched DNA structures, but inhibited by SSB. Does not have RecA's homology-searching function K04485 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007332 417.0
DYD1_k127_445616_1 Plays a role in the flagellum-specific transport system K02419 - - 0.0000000000000000000000000000000000000000000000000000000000000000007509 238.0
DYD1_k127_445616_2 Flagellar biosynthesis pathway component FliR K02421 - - 0.000000000000000000000000000000003487 138.0
DYD1_k127_445616_3 Flagellar motor switch type III secretory pathway K02417 - - 0.0000000000000000000000000001626 124.0
DYD1_k127_445616_4 Flagellar biosynthetic protein FliQ K02420 - - 0.0000000000000000004776 89.0
DYD1_k127_445616_5 Flagellar biosynthesis protein, FliO - - - 0.000000335 60.0
DYD1_k127_445834_0 PFAM Type II secretion system protein E K02283,K03609 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002604 484.0
DYD1_k127_445834_1 Type II secretion system (T2SS), protein F K12510 - - 0.0000000000000000000000000000000827 137.0
DYD1_k127_445834_2 response regulator K02282,K03496,K03609,K04562 - - 0.0003709 52.0
DYD1_k127_4465054_0 Involved in mRNA degradation. Catalyzes the phosphorolysis of single-stranded polyribonucleotides processively in the 3'- to 5'-direction K00962 - 2.7.7.8 2.854e-236 750.0
DYD1_k127_4465054_2 His Kinase A (phosphoacceptor) domain - - - 0.000000000000000000000000000000000000000000000003515 184.0
DYD1_k127_4465054_3 response regulator receiver - - - 0.00000000000000000000000000000000919 133.0
DYD1_k127_4465054_4 Forms an intersubunit bridge (bridge B4) with the 23S rRNA of the 50S subunit in the ribosome K02956 - - 0.000000000000000000000000000006833 120.0
DYD1_k127_4465054_5 - - - - 0.00000000001763 71.0
DYD1_k127_4465054_6 COG1277 ABC-type transport system involved in multi-copper enzyme maturation, permease component K01992 - - 0.000001722 59.0
DYD1_k127_4465054_7 Prolyl oligopeptidase family - - - 0.000003763 59.0
DYD1_k127_4470214_0 ATPase that binds to both the 70S ribosome and the 50S ribosomal subunit in a nucleotide-independent manner K06942 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000001359 262.0
DYD1_k127_4474999_0 serine threonine protein kinase K12132 - 2.7.11.1 0.000000000000000000000000000000000000000000000000000000000006588 234.0
DYD1_k127_4487168_0 SNF2 Helicase protein - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004412 613.0
DYD1_k127_4532134_0 Endonuclease/Exonuclease/phosphatase family - - - 0.00000000000000000003114 104.0
DYD1_k127_4532134_1 Domain of unknown function DUF11 - - - 0.0008917 49.0
DYD1_k127_4551104_0 Alpha/beta hydrolase family - - - 0.000000000000000000000003817 115.0
DYD1_k127_4551104_1 Cadherin repeats. - - - 0.0000000000000005391 85.0
DYD1_k127_4570007_0 Cleaves peptides in various proteins in a process that requires ATP hydrolysis. Has a chymotrypsin-like activity. Plays a major role in the degradation of misfolded proteins K01358 - 3.4.21.92 0.00000000000000000000000000000000000000000000000000000000000000000000000000000003991 272.0
DYD1_k127_4570007_1 Cleaves peptides in various proteins in a process that requires ATP hydrolysis. Has a chymotrypsin-like activity. Plays a major role in the degradation of misfolded proteins K01358 - 3.4.21.92 0.0000000000000000000000000000000000000000000000000000000000000000001681 235.0
DYD1_k127_4570007_2 Involved in protein export. Acts as a chaperone by maintaining the newly synthesized protein in an open conformation. Functions as a peptidyl-prolyl cis-trans isomerase K03545 GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0044424,GO:0044464 - 0.0000000000000000000000000000000000000000000000000000002274 214.0
DYD1_k127_4570007_3 FHA domain-containing protein - - - 0.0002424 53.0
DYD1_k127_4581949_0 Belongs to the peptidase S1B family K01337 - 3.4.21.50 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005892 418.0
DYD1_k127_4581949_1 Bacterial PH domain K08981 - - 0.00000000000000000000000000000000000000000000000000000000000000007077 243.0
DYD1_k127_4581949_2 Bacterial PH domain K09167 - - 0.000000000000000000000007156 109.0
DYD1_k127_4582399_0 Catalyzes the transfer of an acyl group from acyl- phosphate (acyl-PO(4)) to glycerol-3-phosphate (G3P) to form lysophosphatidic acid (LPA). This enzyme utilizes acyl-phosphate as fatty acyl donor, but not acyl-CoA or acyl-ACP K08591 - 2.3.1.15 0.00000000000000000000000000000000000005902 150.0
DYD1_k127_4582399_1 Pectate lyase - - - 0.0000001317 63.0
DYD1_k127_4586026_0 PFAM Nickel-dependent hydrogenase, large subunit - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004761 447.0
DYD1_k127_4586026_1 Oxidoreductase NAD-binding domain K00528,K02823,K16951 - 1.18.1.2,1.19.1.1 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009108 325.0
DYD1_k127_4586026_10 Probably plays a role in a hydrogenase nickel cofactor insertion step K04651 - - 0.0000000001215 68.0
DYD1_k127_4586026_2 Malic enzyme, NAD binding domain K00027,K00029 - 1.1.1.38,1.1.1.40 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002797 314.0
DYD1_k127_4586026_3 4Fe-4S dicluster domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000001412 259.0
DYD1_k127_4586026_4 NADH ubiquinone oxidoreductase, 20 Kd subunit - - - 0.00000000000000000000000000000000000000000000000000000000000000001975 235.0
DYD1_k127_4586026_5 Psort location Cytoplasmic, score 9.97 K04652 - - 0.00000000000000000000000000000000000000000000000000000000000000207 229.0
DYD1_k127_4586026_6 Domain of unknown function (DUF4405) - - - 0.00000000000000000000001681 111.0
DYD1_k127_4586026_7 hydrogenase expression formation protein HypE K04655 - - 0.0000000000000000001908 89.0
DYD1_k127_4586026_8 Cytidylate kinase-like family - - - 0.0000000000000000004425 96.0
DYD1_k127_4586026_9 Hydrogenase maturation protease K03605 - - 0.0000000000004144 79.0
DYD1_k127_4588870_0 Protein tyrosine kinase K12132 - 2.7.11.1 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004852 374.0
DYD1_k127_4588870_1 Belongs to the ribulose-phosphate 3-epimerase family K01783 - 5.1.3.1 0.000000000000000000000000000000000000000000000904 175.0
DYD1_k127_4588870_2 PPIases accelerate the folding of proteins. It catalyzes the cis-trans isomerization of proline imidic peptide bonds in oligopeptides K03767,K03768 - 5.2.1.8 0.0000000000000000000000000000000006758 149.0
DYD1_k127_4588870_3 AAA ATPase domain - - - 0.00000000000000000008227 106.0
DYD1_k127_4588870_5 Protein of unknown function (DUF1573) - - - 0.000000171 63.0
DYD1_k127_4588870_6 Belongs to the sigma-70 factor family. ECF subfamily K03088 - - 0.0000004574 60.0
DYD1_k127_4590197_0 DNA methylase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001038 464.0
DYD1_k127_4590197_1 ATPase associated with K03924 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006985 425.0
DYD1_k127_4590197_2 Belongs to the monovalent cation proton antiporter 2 (CPA2) transporter (TC 2.A.37) family K03455 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000093 366.0
DYD1_k127_4598119_0 DNA repair enzyme involved in the repair of deaminated bases. Selectively cleaves double-stranded DNA at the second phosphodiester bond 3' to a deoxyinosine leaving behind the intact lesion on the nicked DNA K05982 - 3.1.21.7 0.000000000000000000000000000000000000000000000000000000000000002326 226.0
DYD1_k127_4598119_1 TIGR00268 family K06864 - - 0.000000000000000000000000000000000000000000000001918 177.0
DYD1_k127_4598119_2 ErfK YbiS YcfS YnhG family protein - - - 0.000000000000000000000000000000000000003236 152.0
DYD1_k127_4601858_0 Carbamoyltransferase C-terminus K00612 - - 1.923e-232 734.0
DYD1_k127_4601858_1 Carbamoyltransferase C-terminus K00612 - - 0.000000000000000000000000000000000000000000000889 179.0
DYD1_k127_4601858_2 Methyltransferase FkbM domain - - - 0.000000000000000000001214 101.0
DYD1_k127_4601858_3 methyltransferase - - - 0.00000000000000000005315 103.0
DYD1_k127_4601858_4 Polysaccharide deacetylase - - - 0.00003018 54.0
DYD1_k127_4608114_0 Catalyzes the condensation of para-aminobenzoate (pABA) with 6-hydroxymethyl-7,8-dihydropterin diphosphate (DHPt-PP) to form 7,8-dihydropteroate (H2Pte), the immediate precursor of folate derivatives K00796,K13941 - 2.5.1.15,2.7.6.3 0.0000000000000000000000000000000000000000000000000000000000000000000000002992 258.0
DYD1_k127_4608114_1 cytochrome C peroxidase - - - 0.00000000000000000000000000000000000000000000000000000000000000007739 246.0
DYD1_k127_4608114_2 Catalyzes the ATP-dependent amidation of deamido-NAD to form NAD. Uses L-glutamine as a nitrogen source K01950 - 6.3.5.1 0.0000000000000000000000000000000000000000000000000000000000000002124 223.0
DYD1_k127_4608114_3 Uncharacterized protein conserved in bacteria (DUF2237) K09966 - - 0.00000000000000000000000000000000000000000000000005087 183.0
DYD1_k127_4623430_0 A type II topoisomerase that negatively supercoils closed circular double-stranded (ds) DNA in an ATP-dependent manner to modulate DNA topology and maintain chromosomes in an underwound state. Negative supercoiling favors strand separation, and DNA replication, transcription, recombination and repair, all of which involve strand separation. Also able to catalyze the interconversion of other topological isomers of dsDNA rings, including catenanes and knotted rings. Type II topoisomerases break and join 2 DNA strands simultaneously in an ATP-dependent manner K02470 - 5.99.1.3 5.344e-217 700.0
DYD1_k127_4623430_1 - - - - 0.0000006333 59.0
DYD1_k127_4631759_0 Belongs to the UbiD family K03182,K16239 - 4.1.1.61,4.1.1.98 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000251 490.0
DYD1_k127_4631759_1 Plasmid pRiA4b ORF-3-like protein - - - 0.000000000000000000000000000000000000000000000000000000004906 206.0
DYD1_k127_4631759_2 - - - - 0.0003295 51.0
DYD1_k127_4634164_0 Beta propeller domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000001713 263.0
DYD1_k127_4634164_1 - - - - 0.0000000000000000003146 91.0
DYD1_k127_4634164_2 - - - - 0.0000000000000001889 81.0
DYD1_k127_4634164_3 - - - - 0.00000000000003324 72.0
DYD1_k127_4634164_4 - - - - 0.000000000007652 66.0
DYD1_k127_4634164_6 - - - - 0.0000001514 56.0
DYD1_k127_4634164_7 - - - - 0.0000004005 51.0
DYD1_k127_4634164_9 regulator of chromosome condensation, RCC1 - - - 0.0009133 46.0
DYD1_k127_4652463_0 peptide-methionine (S)-S-oxide reductase activity - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000003715 282.0
DYD1_k127_4652463_1 glycosyl transferase, family 2 - GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0044424,GO:0044444,GO:0044464 - 0.000000000000000000001896 107.0
DYD1_k127_4652463_2 signal peptide peptidase K04773 - - 0.000000000000000000002833 102.0
DYD1_k127_4652463_3 Domain of unknown function (DUF309) K09763 - - 0.000003388 55.0
DYD1_k127_4652463_4 Acetyltransferase (GNAT) domain - - - 0.00003493 50.0
DYD1_k127_4653985_0 Endonuclease that specifically degrades the RNA of RNA- DNA hybrids - - - 0.0000000000000000000000000000000000000000000004163 181.0
DYD1_k127_4653985_1 Peptidase S16, lon domain protein K01338,K07157 - 3.4.21.53 0.0000000000000000000000000642 117.0
DYD1_k127_4653985_2 Protein of unknown function (DUF962) - - - 0.000000000000000000000262 104.0
DYD1_k127_4670832_0 Protein tyrosine kinase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006791 604.0
DYD1_k127_4670832_1 FAD-dependent pyridine nucleotide-disulphide oxidoreductase K03885 - 1.6.99.3 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001308 329.0
DYD1_k127_4670832_2 Cysteinyl-tRNA synthetase K01884 - 6.1.1.16 0.0000000000000000000000000000000000000000000000001202 190.0
DYD1_k127_4670832_3 FAD dependent oxidoreductase K00273 - 1.4.3.3 0.000000000000000000000000000000000005787 144.0
DYD1_k127_4710014_0 PFAM Aminotransferase class I and II K00812,K10907 - 2.6.1.1 0.0000000000000000000000000000000000000000000001482 173.0
DYD1_k127_4730915_0 - - - - 0.00000000000000000000000000000000000000000004904 163.0
DYD1_k127_4730915_1 RNA recognition motif - - - 0.0000000000000000000000000000001404 128.0
DYD1_k127_4730915_2 enzyme of the cupin superfamily - - - 0.0000000000000000000001998 107.0
DYD1_k127_4758177_0 Belongs to the ATCase OTCase family K00609 - 2.1.3.2 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003401 394.0
DYD1_k127_4758177_1 Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family K02005 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000001822 265.0
DYD1_k127_4758177_2 Belongs to the purine pyrimidine phosphoribosyltransferase family. PyrR subfamily K02825 - 2.4.2.9 0.00000000000000000000000000000000000000000265 164.0
DYD1_k127_4761298_0 Putative Tad-like Flp pilus-assembly - - - 0.00000000000002024 86.0
DYD1_k127_4761298_1 Putative Flp pilus-assembly TadE/G-like - - - 0.00000000000003185 85.0
DYD1_k127_4761298_2 PFAM TadE family protein - - - 0.000000001108 70.0
DYD1_k127_4761298_3 Putative Flp pilus-assembly TadE/G-like - - - 0.000004229 59.0
DYD1_k127_4761298_4 Putative Flp pilus-assembly TadE/G-like - - - 0.00001064 58.0
DYD1_k127_4761298_5 Putative Flp pilus-assembly TadE/G-like - - - 0.00003746 53.0
DYD1_k127_4763882_0 AAA domain - - - 0.0000000000000000000000002022 123.0
DYD1_k127_4763882_1 TPR domain protein - - - 0.0001534 52.0
DYD1_k127_4790272_0 folylpolyglutamate synthase K11754 - 6.3.2.12,6.3.2.17 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001666 471.0
DYD1_k127_4790272_1 Polymer-forming cytoskeletal - - - 0.00000253 56.0
DYD1_k127_4791265_0 Psort location Cytoplasmic, score K00059 - 1.1.1.100 0.00000000000000000000000000000000000000000000000000000000000000000000000005254 256.0
DYD1_k127_4791265_1 Catalyzes the condensation reaction of fatty acid synthesis by the addition to an acyl acceptor of two carbons from malonyl-ACP K09458 - 2.3.1.179 0.0000000000000000000000000000000000000000000000000000000000000000000008936 243.0
DYD1_k127_4791265_2 malonyl CoA-acyl carrier protein transacylase K00645 - 2.3.1.39 0.000000000000000000000000001501 120.0
DYD1_k127_4791265_3 transposase activity - - - 0.000000000000000000000001647 104.0
DYD1_k127_4791265_4 Carrier of the growing fatty acid chain in fatty acid biosynthesis K02078 GO:0000035,GO:0000036,GO:0003674,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005975,GO:0006082,GO:0006629,GO:0006631,GO:0006633,GO:0006643,GO:0006644,GO:0006664,GO:0006793,GO:0006796,GO:0008150,GO:0008152,GO:0008610,GO:0008654,GO:0009058,GO:0009245,GO:0009247,GO:0009311,GO:0009312,GO:0009987,GO:0016051,GO:0016053,GO:0019637,GO:0019752,GO:0019842,GO:0031177,GO:0032787,GO:0033218,GO:0036094,GO:0043167,GO:0043168,GO:0043436,GO:0044237,GO:0044238,GO:0044249,GO:0044255,GO:0044281,GO:0044283,GO:0044424,GO:0044444,GO:0044464,GO:0044620,GO:0046394,GO:0046467,GO:0046493,GO:0048037,GO:0051192,GO:0071704,GO:0072330,GO:0072341,GO:0090407,GO:0140104,GO:1901135,GO:1901137,GO:1901269,GO:1901271,GO:1901576,GO:1903509 - 0.00000000000000000000001979 105.0
DYD1_k127_4791879_0 Malic enzyme, NAD binding domain K00029 - 1.1.1.40 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002326 568.0
DYD1_k127_4791879_1 Belongs to the class-IV pyridoxal-phosphate-dependent aminotransferase family K00826 - 2.6.1.42 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000208 405.0
DYD1_k127_4791879_2 Glucose / Sorbosone dehydrogenase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004094 427.0
DYD1_k127_4791879_3 Antitoxin component of a toxin-antitoxin (TA) module - - - 0.00000000000000000000000000006991 119.0
DYD1_k127_4791879_4 Plasmid stabilization system - - - 0.0000000000000000268 85.0
DYD1_k127_4804274_0 - - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001277 313.0
DYD1_k127_4804274_1 Flavin containing amine oxidoreductase - - - 0.000000000000000000000000000000000000000000000000000000000008961 229.0
DYD1_k127_4804274_2 Polyketide cyclase / dehydrase and lipid transport - - - 0.00000000000000008031 88.0
DYD1_k127_4804274_3 Belongs to the peptidase M24B family K01262,K01271 - 3.4.11.9,3.4.13.9 0.00005738 49.0
DYD1_k127_4811570_0 Zinc dependent phospholipase C - - - 0.000000000000000000000000000000000000000000000004833 184.0
DYD1_k127_4821036_0 One of the essential components for the initiation of protein synthesis. Protects formylmethionyl-tRNA from spontaneous hydrolysis and promotes its binding to the 30S ribosomal subunits. Also involved in the hydrolysis of GTP during the formation of the 70S ribosomal complex K02519 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000003493 283.0
DYD1_k127_4821036_1 transcriptional regulatory protein - - - 0.00000000000000000000000000000000000000000000002592 172.0
DYD1_k127_4821036_2 Tetratricopeptide repeat - - - 0.0000000000000000000001392 115.0
DYD1_k127_4821036_3 One of several proteins that assist in the late maturation steps of the functional core of the 30S ribosomal subunit. Associates with free 30S ribosomal subunits (but not with 30S subunits that are part of 70S ribosomes or polysomes). Required for efficient processing of 16S rRNA. May interact with the 5'-terminal helix region of 16S rRNA K02834 - - 0.00000000000000000576 92.0
DYD1_k127_4821036_4 Protein of unknown function (DUF503) K09764 - - 0.00000000003726 68.0
DYD1_k127_4821036_5 DNA repair enzyme that has both DNA N-glycosylase activity and AP-lyase activity. The DNA N-glycosylase activity releases various damaged pyrimidines from DNA by cleaving the N- glycosidic bond, leaving an AP (apurinic apyrimidinic) site. The AP-lyase activity cleaves the phosphodiester bond 3' to the AP site by a beta-elimination, leaving a 3'-terminal unsaturated sugar and a product with a terminal 5'-phosphate K10773 - 4.2.99.18 0.0000000001325 71.0
DYD1_k127_4821036_6 Tetratricopeptide repeat - - - 0.000000002596 72.0
DYD1_k127_4852037_0 PFAM asparagine synthase K01953 - 6.3.5.4 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002642 485.0
DYD1_k127_4852037_1 COG1541 Coenzyme F390 synthetase K01912 - 6.2.1.30 0.000000000000000000000000000000000000000000000000000000000000000000000000001023 289.0
DYD1_k127_4852037_2 Domain of unknown function (DUF362) - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000001249 256.0
DYD1_k127_4852037_3 Bacterial Ig-like domain 2 - - - 0.000008277 56.0
DYD1_k127_4852037_4 Dolichyl-phosphate-mannose-protein mannosyltransferase - - - 0.0007752 52.0
DYD1_k127_4868310_0 HD domain - - - 0.00000000000000000000000000000000000000000000000001674 194.0
DYD1_k127_4868310_1 Tetratricopeptide repeat - - - 0.0000001555 59.0
DYD1_k127_4869851_0 PFAM Metal-dependent phosphohydrolase, HD K07037 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002739 343.0
DYD1_k127_4869851_1 ABC transporter K02003 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000007104 259.0
DYD1_k127_4869851_2 COG1253 Hemolysins and related - - - 0.0000000000000000000000000000000000000000000000000000000000000003219 237.0
DYD1_k127_4869851_3 COG0577 ABC-type antimicrobial peptide transport system permease component K02004 - - 0.000000000000000000000000000000000000000000000000000000000003681 226.0
DYD1_k127_4869851_4 S-adenosyl-l-methionine hydroxide adenosyltransferase K22205 - - 0.00000000000000000000000000000000000000000004971 165.0
DYD1_k127_4869851_5 Transcriptional regulator PadR-like family - - - 0.00000000000000000000000000002878 123.0
DYD1_k127_4869851_6 Involved in DNA repair and RecF pathway recombination K03584 - - 0.0000000000000000000000000529 117.0
DYD1_k127_4869851_7 Single strand-specific metallo-endoribonuclease involved in late-stage 70S ribosome quality control and in maturation of the 3' terminus of the 16S rRNA K07042 - - 0.00000000000000000000001936 108.0
DYD1_k127_4869851_8 DREV methyltransferase - - - 0.000000000003289 76.0
DYD1_k127_4869851_9 Nitrilase cyanide hydratase - - - 0.00001537 56.0
DYD1_k127_4871648_0 hydrolase activity, hydrolyzing O-glycosyl compounds K01176 - 3.2.1.1 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000001061 318.0
DYD1_k127_4892887_0 Polysaccharide biosynthesis protein CapD - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006434 449.0
DYD1_k127_4892887_1 Converts alpha-N-acetylneuranimic acid (Neu5Ac) to the beta-anomer, accelerating the equilibrium between the alpha- and beta-anomers. Probably facilitates sialidase-negative bacteria to compete sucessfully for limited amounts of extracellular Neu5Ac, which is likely taken up in the beta-anomer. In addition, the rapid removal of sialic acid from solution might be advantageous to the bacterium to damp down host responses - - - 0.0000002316 60.0
DYD1_k127_490000_0 Catalyzes the addition of meso-diaminopimelic acid to the nucleotide precursor UDP-N-acetylmuramoyl-L-alanyl-D-glutamate (UMAG) in the biosynthesis of bacterial cell-wall peptidoglycan K01928 - 6.3.2.13 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003265 373.0
DYD1_k127_490000_1 Penicillin-binding Protein dimerisation domain K03587 - 3.4.16.4 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008397 364.0
DYD1_k127_490000_2 Involved in cell wall formation. Catalyzes the final step in the synthesis of UDP-N-acetylmuramoyl-pentapeptide, the precursor of murein K01929 - 6.3.2.10 0.0000000000000000000000000000000000000000000000000287 190.0
DYD1_k127_490000_3 LysM domain - - - 0.000003689 56.0
DYD1_k127_490000_4 5'-nucleotidase, C-terminal domain - - - 0.00001672 54.0
DYD1_k127_4916798_0 ABC-type transport system involved in multi-copper enzyme maturation permease component - - - 0.000000000000000000000000000002351 134.0
DYD1_k127_4916798_1 Belongs to the sigma-70 factor family. ECF subfamily K03088 GO:0000988,GO:0000990,GO:0003674,GO:0005575,GO:0005618,GO:0005623,GO:0006355,GO:0006950,GO:0006979,GO:0008150,GO:0009266,GO:0009408,GO:0009628,GO:0009889,GO:0009987,GO:0010468,GO:0010556,GO:0016987,GO:0019219,GO:0019222,GO:0030312,GO:0031323,GO:0031326,GO:0033554,GO:0034605,GO:0043254,GO:0044087,GO:0044464,GO:0050789,GO:0050794,GO:0050896,GO:0051128,GO:0051171,GO:0051252,GO:0051409,GO:0051716,GO:0060255,GO:0065007,GO:0071944,GO:0080090,GO:0140110,GO:1903506,GO:2000112,GO:2000142,GO:2001141 - 0.0000000000000001212 89.0
DYD1_k127_4927057_0 COG1674 DNA segregation ATPase FtsK SpoIIIE and related K03466 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005723 601.0
DYD1_k127_4927057_1 Glutamate-1-semialdehyde aminotransferase K01845 - 5.4.3.8 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007827 511.0
DYD1_k127_4927057_2 tRNA-(MS[2]IO[6]A)-hydroxylase (MiaE) K06169 - - 0.0000000000000000000000000000000000000000000000000000000000005994 217.0
DYD1_k127_4927057_3 Belongs to the ALAD family K01698 GO:0003674,GO:0003824,GO:0004655,GO:0005488,GO:0005575,GO:0005618,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006725,GO:0006778,GO:0006779,GO:0006783,GO:0006807,GO:0008150,GO:0008152,GO:0008270,GO:0009058,GO:0009987,GO:0016829,GO:0016835,GO:0016836,GO:0018130,GO:0019438,GO:0030312,GO:0033013,GO:0033014,GO:0034641,GO:0042168,GO:0042440,GO:0043167,GO:0043169,GO:0044237,GO:0044249,GO:0044271,GO:0044424,GO:0044444,GO:0044464,GO:0046148,GO:0046483,GO:0046872,GO:0046914,GO:0051186,GO:0051188,GO:0071704,GO:0071944,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576 4.2.1.24 0.0000000000000000000000000000000000000003646 151.0
DYD1_k127_4927057_4 regulator of chromosome condensation, RCC1 - - - 0.0000000000000000000001457 113.0
DYD1_k127_4927057_5 Transposase K07491 - - 0.0000000000000000004339 92.0
DYD1_k127_4927057_6 Transposase K07491 - - 0.000000000000005861 76.0
DYD1_k127_4927057_7 RDD family - - - 0.000002163 57.0
DYD1_k127_4927057_8 STAS domain K06378 - - 0.00001984 53.0
DYD1_k127_4938707_0 ATP-dependent serine protease that mediates the selective degradation of mutant and abnormal proteins as well as certain short-lived regulatory proteins. Required for cellular homeostasis and for survival from DNA damage and developmental changes induced by stress. Degrades polypeptides processively to yield small peptide fragments that are 5 to 10 amino acids long. Binds to DNA in a double-stranded, site-specific manner K01338 - 3.4.21.53 1.212e-210 675.0
DYD1_k127_4938707_1 ABC transporter - - - 0.000000000000000000000000000000000000000000000000000000000003165 212.0
DYD1_k127_4938707_2 COG1246 N-acetylglutamate synthase and related acetyltransferases K00619 - 2.3.1.1 0.0000000000000000000006712 98.0
DYD1_k127_4938707_3 Xylose isomerase-like TIM barrel - - - 0.0000000001367 71.0
DYD1_k127_4941017_0 biosynthesis protein K08252 - 2.7.10.1 0.00000000000000001608 94.0
DYD1_k127_4941017_1 Polysaccharide biosynthesis protein - - - 0.00000003121 66.0
DYD1_k127_4941017_2 involved in the assembly of lipopolysaccharide (LPS) at the surface of the outer membrane - - - 0.00000006709 64.0
DYD1_k127_4941017_3 Calcineurin-like phosphoesterase superfamily domain K07095 - - 0.000002205 50.0
DYD1_k127_4942799_1 TPR repeat - - - 0.0000000000000000000004587 105.0
DYD1_k127_4942799_2 Tetratricopeptide TPR_2 repeat protein - - - 0.000000005429 66.0
DYD1_k127_496112_0 ASPIC and UnbV - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000005804 301.0
DYD1_k127_496112_1 ASPIC and UnbV - - - 0.0000000000000000000000000000000000000000000000000000002654 210.0
DYD1_k127_4963614_0 Molybdate K02018 GO:0005575,GO:0005623,GO:0005886,GO:0005887,GO:0016020,GO:0016021,GO:0031224,GO:0031226,GO:0044425,GO:0044459,GO:0044464,GO:0071944 - 0.000000000000000000000000000000000000000009391 168.0
DYD1_k127_4963614_1 COG0476 Dinucleotide-utilizing enzymes involved in molybdopterin and thiamine biosynthesis family 2 K21029,K21147 - 2.7.7.80,2.8.1.11 0.00000000000000000000000000005547 123.0
DYD1_k127_4963614_2 Thioesterase superfamily K10806 - - 0.000000000000000000000000007332 113.0
DYD1_k127_4970708_0 XFP N-terminal domain K00615 - 2.2.1.1 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006482 588.0
DYD1_k127_4970708_1 Cell wall formation. Adds enolpyruvyl to UDP-N- acetylglucosamine K00790 - 2.5.1.7 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005409 485.0
DYD1_k127_4970708_2 ABC transporter K02065 - - 0.000000000000000000000000000000000000000000000000000000000000248 232.0
DYD1_k127_4971231_0 Required for formation of the rod structure of the flagellar apparatus. Together with FliI and FliH, may constitute the export apparatus of flagellin K02400 - - 5.518e-200 645.0
DYD1_k127_4971231_1 Required for formation of the rod structure in the basal body of the flagellar apparatus. Together with FliI and FliH, may constitute the export apparatus of flagellin K02401 - - 0.000000000000000000000000000000000000000000000000000000000000002073 227.0
DYD1_k127_4971231_2 Flagellar biosynthesis K02404 - - 0.000000002436 59.0
DYD1_k127_4973733_0 Serine threonine protein kinase K12132 - 2.7.11.1 0.0000000000000000000000000000000000000000000000000000000000000000134 241.0
DYD1_k127_4973733_1 cellulose binding - - - 0.0000000000000001262 90.0
DYD1_k127_497581_0 COG1239 Mg-chelatase subunit ChlI K03405 - 6.6.1.1 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004864 329.0
DYD1_k127_4977322_0 Belongs to the class I-like SAM-binding methyltransferase superfamily. RsmB NOP family K03500 - 2.1.1.176 0.0000000000000000000000000000000000000000000000000000006524 212.0
DYD1_k127_5001000_0 Alpha/beta hydrolase family K06889 - - 0.000000000000000000000000000000000000000000000000000000000000003427 225.0
DYD1_k127_5001000_1 Alpha/beta hydrolase family K06889 - - 0.000000000000000000000000000000000000000000000000008863 192.0
DYD1_k127_5001000_2 phosphoribosylglycinamide formyltransferase activity K00601,K11787,K11788 - 2.1.2.2,6.3.3.1,6.3.4.13 0.000000000000000000000000000000000000000000000003315 180.0
DYD1_k127_5058181_0 Catalyzes the formation of 4-diphosphocytidyl-2-C- methyl-D-erythritol from CTP and 2-C-methyl-D-erythritol 4- phosphate (MEP) K00991 GO:0003674,GO:0003824,GO:0016740,GO:0016772,GO:0016779,GO:0050518,GO:0070567 2.7.7.60 0.00000000000000000000000000000000000000000000004543 176.0
DYD1_k127_5058181_1 Belongs to the GcvT family K06980 - - 0.000000000000000000000000000000000001179 153.0
DYD1_k127_5058181_2 - - - - 0.0000001681 63.0
DYD1_k127_5072215_0 alginic acid biosynthetic process - - - 0.0000000000000000000000000000000000000000000000000000006946 207.0
DYD1_k127_5072215_1 Memo-like protein K06990 - - 0.0000000000000000000000000000000000000000000003885 182.0
DYD1_k127_5072215_2 COG1762 Phosphotransferase system mannitol fructose-specific IIA domain (Ntr-type) K02768,K02769,K02770 GO:0003674,GO:0003824,GO:0005215,GO:0005575,GO:0005623,GO:0005886,GO:0006810,GO:0008150,GO:0008643,GO:0009401,GO:0015144,GO:0016020,GO:0016740,GO:0016772,GO:0016773,GO:0022804,GO:0022857,GO:0034219,GO:0044464,GO:0051179,GO:0051234,GO:0055085,GO:0071702,GO:0071944,GO:0090563 2.7.1.202 0.0000000000000000000000005374 114.0
DYD1_k127_5072215_3 domain, Protein - - - 0.00000000000000000005153 100.0
DYD1_k127_5072215_4 PFAM Uncharacterised protein family UPF0150 - - - 0.000000000000001781 79.0
DYD1_k127_5072215_5 mRNA binding - - - 0.00000000000001875 78.0
DYD1_k127_5072215_6 PIN domain - - - 0.000158 44.0
DYD1_k127_5072215_7 - - - - 0.0004793 45.0
DYD1_k127_5075780_0 Type II secretory pathway, ATPase PulE Tfp pilus assembly pathway, ATPase PilB K02652 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004082 608.0
DYD1_k127_5075780_1 Type II secretory pathway, ATPase PulE Tfp pilus assembly pathway, ATPase PilB K02652 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005393 563.0
DYD1_k127_5075780_2 COG2805 Tfp pilus assembly protein, pilus retraction ATPase PilT K02669 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000479 500.0
DYD1_k127_5075780_3 Required for the formation of a threonylcarbamoyl group on adenosine at position 37 (t(6)A37) in tRNAs that read codons beginning with adenine. Is involved in the transfer of the threonylcarbamoyl moiety of threonylcarbamoyl-AMP (TC-AMP) to the N6 group of A37, together with TsaE and TsaB. TsaD likely plays a direct catalytic role in this reaction K01409 GO:0000408,GO:0002949,GO:0005575,GO:0005622,GO:0005623,GO:0006139,GO:0006396,GO:0006399,GO:0006400,GO:0006725,GO:0006807,GO:0008033,GO:0008150,GO:0008152,GO:0009451,GO:0009987,GO:0010467,GO:0016070,GO:0032991,GO:0034470,GO:0034641,GO:0034660,GO:0043170,GO:0043412,GO:0044237,GO:0044238,GO:0044424,GO:0044464,GO:0046483,GO:0070525,GO:0071704,GO:0090304,GO:1901360 2.3.1.234 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003756 332.0
DYD1_k127_5075780_4 Belongs to the peptidase S41A family K03797 - 3.4.21.102 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000009301 304.0
DYD1_k127_5101053_0 Ribosomal protein S1 K02945 - - 5.946e-221 701.0
DYD1_k127_5101053_1 An essential GTPase which binds GTP, GDP and possibly (p)ppGpp with moderate affinity, with high nucleotide exchange rates and a fairly low GTP hydrolysis rate. Plays a role in control of the cell cycle, stress response, ribosome biogenesis and in those bacteria that undergo differentiation, in morphogenesis control K03979 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000014 382.0
DYD1_k127_5101053_10 lysine biosynthetic process via aminoadipic acid - - - 0.000003372 61.0
DYD1_k127_5101053_2 Glycosyl transferases group 1 - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006252 336.0
DYD1_k127_5101053_3 Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released K03086 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000007196 281.0
DYD1_k127_5101053_4 Protein of unknown function (DUF502) - - - 0.00000000000000000000000000000000000000000000162 175.0
DYD1_k127_5101053_5 Transfers the 4'-phosphopantetheine moiety from coenzyme A to a Ser of acyl-carrier-protein K00997 - 2.7.8.7 0.000000000000000000000000000000004671 132.0
DYD1_k127_5101053_6 Belongs to the bacterial ribosomal protein bL27 family K02899 GO:0003674,GO:0003735,GO:0005198,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0015934,GO:0022625,GO:0022626,GO:0032991,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:1990904 - 0.000000000000000000000000006782 114.0
DYD1_k127_5101053_7 nuclear chromosome segregation - - - 0.000000000000000000007102 108.0
DYD1_k127_5101053_8 4Fe-4S binding domain protein - - - 0.00000000000008785 85.0
DYD1_k127_5101053_9 Domain of unknown function (DUF4091) - - - 0.0000000000000969 86.0
DYD1_k127_5115249_0 - - - - 0.000000000000002885 81.0
DYD1_k127_5131470_0 von Willebrand factor, type A K07114 - - 0.000000000000000000000000000000000000000000000000000001274 218.0
DYD1_k127_5138885_0 PFAM NAD dependent epimerase dehydratase family - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001016 348.0
DYD1_k127_5138885_1 Belongs to the class-I aminoacyl-tRNA synthetase family K01869 GO:0003674,GO:0003824,GO:0004812,GO:0004823,GO:0006082,GO:0006139,GO:0006399,GO:0006412,GO:0006418,GO:0006429,GO:0006518,GO:0006520,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0016070,GO:0016874,GO:0016875,GO:0019538,GO:0019752,GO:0034641,GO:0034645,GO:0034660,GO:0043038,GO:0043039,GO:0043043,GO:0043170,GO:0043436,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044281,GO:0046483,GO:0071704,GO:0090304,GO:0140098,GO:0140101,GO:1901360,GO:1901564,GO:1901566,GO:1901576 6.1.1.4 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005405 312.0
DYD1_k127_5138885_2 CYTH domain K01768,K05873 - 4.6.1.1 0.0000000000000000000000004654 113.0
DYD1_k127_5138885_3 HicB_like antitoxin of bacterial toxin-antitoxin system - - - 0.0000000000000000000000004671 108.0
DYD1_k127_5138885_4 mRNA binding - - - 0.000000000000000000007351 92.0
DYD1_k127_5138885_5 Bacterial PH domain K08981 - - 0.000000008204 57.0
DYD1_k127_514392_0 Peptidase family S49 K04773 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000006303 273.0
DYD1_k127_514392_1 ABC-type transport system, involved in lipoprotein release, permease component K02004 - - 0.0000000000000000000000000000000000000000000000000000008894 207.0
DYD1_k127_5208789_0 amine dehydrogenase activity - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007806 338.0
DYD1_k127_5208789_1 COG2804 Type II secretory pathway ATPase PulE Tfp pilus assembly pathway ATPase PilB K02454,K02652 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005761 313.0
DYD1_k127_5223038_0 with the TIM-barrel fold K07051 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006264 419.0
DYD1_k127_5223038_2 GDSL-like Lipase/Acylhydrolase K10804 - 3.1.1.5 0.000007932 56.0
DYD1_k127_5268832_0 Participates in initiation and elongation during chromosome replication K02314 - 3.6.4.12 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001889 456.0
DYD1_k127_5268832_1 Binds to the 23S rRNA K02939 GO:0003674,GO:0003676,GO:0003723,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0006412,GO:0006518,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0015934,GO:0019538,GO:0022625,GO:0022626,GO:0032991,GO:0034641,GO:0034645,GO:0043043,GO:0043170,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:0071704,GO:0097159,GO:1901363,GO:1901564,GO:1901566,GO:1901576,GO:1990904 - 0.0000000000000000000000000000000000000000000007804 171.0
DYD1_k127_5268832_2 Single-stranded DNA-binding protein K03111 - - 0.0000000000000000000000000000000000000000005867 161.0
DYD1_k127_5269370_0 Uncharacterized protein family (UPF0051) K09014 - - 6.784e-270 835.0
DYD1_k127_5269370_1 Belongs to the HesB IscA family K13628 - - 0.0000000000000000000000000000000000000000000000008543 175.0
DYD1_k127_5269370_2 Transcriptional regulator - - - 0.000000000000000003538 91.0
DYD1_k127_5275904_0 Forms part of the ribosomal stalk, playing a central role in the interaction of the ribosome with GTP-bound translation factors K02864 - - 0.000000000000000000000000000000000000000000000000000000000002639 213.0
DYD1_k127_5275904_1 DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates K03043 - 2.7.7.6 0.0000000000000000000000000000000000000000000000000000003709 197.0
DYD1_k127_5275904_2 Forms part of the ribosomal stalk which helps the ribosome interact with GTP-bound translation factors. Is thus essential for accurate translation K02935 - - 0.000000000000000000000000000000000000000000001831 168.0
DYD1_k127_5275904_3 Binds directly to 23S rRNA. The L1 stalk is quite mobile in the ribosome, and is involved in E site tRNA release K02863 - - 0.000000000000000001522 86.0
DYD1_k127_5304874_0 ABC-type antimicrobial peptide transport system, ATPase component K02003 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002033 370.0
DYD1_k127_5304874_1 COG0845 Membrane-fusion protein - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000001715 306.0
DYD1_k127_5304874_2 amine dehydrogenase activity - - - 0.000000000000000000000008193 117.0
DYD1_k127_5304874_3 Repeats in polycystic kidney disease 1 (PKD1) and other proteins - - - 0.000000000000000002178 99.0
DYD1_k127_5320561_0 X-Pro dipeptidyl-peptidase (S15 family) - - - 3.943e-218 698.0
DYD1_k127_5320561_1 Catalyzes the conversion of cyclic dehypoxanthine futalosine (cyclic DHFL) into 1,4-dihydroxy-6-naphthoate, a step in the biosynthesis of menaquinone (MK, vitamin K2) K11785 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003533 366.0
DYD1_k127_5320561_2 Belongs to the peptidase S41A family K03797 - 3.4.21.102 0.00000000000000000000000000000000000000000000000000000000000000007794 249.0
DYD1_k127_5320561_3 FtsJ-like methyltransferase K06442 - 2.1.1.226,2.1.1.227 0.00000000000000000000000000000000000000000156 162.0
DYD1_k127_5320561_4 COG2172 Anti-sigma regulatory factor (Ser Thr protein kinase) K04757 - 2.7.11.1 0.00000000000000000000000000000000008588 139.0
DYD1_k127_5320561_5 Removes the formyl group from the N-terminal Met of newly synthesized proteins. Requires at least a dipeptide for an efficient rate of reaction. N-terminal L-methionine is a prerequisite for activity but the enzyme has broad specificity at other positions K01462 GO:0003674,GO:0003824,GO:0006464,GO:0006807,GO:0008150,GO:0008152,GO:0009987,GO:0016787,GO:0016810,GO:0016811,GO:0018193,GO:0018206,GO:0019538,GO:0031365,GO:0036211,GO:0042586,GO:0043170,GO:0043412,GO:0043686,GO:0044237,GO:0044238,GO:0044260,GO:0044267,GO:0071704,GO:1901564 3.5.1.88 0.000000000000000000000000000000000217 139.0
DYD1_k127_5320561_6 peptidyl-tyrosine sulfation - - - 0.000000000000000000000000003294 127.0
DYD1_k127_5320561_7 Anti-anti-sigma regulatory factor (Antagonist of anti-sigma factor) K04749 - - 0.00000000000000000000000001122 113.0
DYD1_k127_5320561_8 Binds directly to 16S ribosomal RNA K02968 - - 0.000000000006347 68.0
DYD1_k127_5320561_9 Belongs to the anti-sigma-factor antagonist family K04749 - - 0.0000000001077 69.0
DYD1_k127_5324971_0 Belongs to the PEP-utilizing enzyme family K01007 - 2.7.9.2 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006539 595.0
DYD1_k127_5324971_1 Reversibly catalyzes the transfer of the carbamoyl group from carbamoyl phosphate (CP) to the N(epsilon) atom of ornithine (ORN) to produce L-citrulline K00611 GO:0000050,GO:0003674,GO:0003824,GO:0004585,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006082,GO:0006520,GO:0006525,GO:0006526,GO:0006591,GO:0006807,GO:0008150,GO:0008152,GO:0008652,GO:0009058,GO:0009064,GO:0009084,GO:0009987,GO:0016053,GO:0016740,GO:0016741,GO:0016743,GO:0019627,GO:0019752,GO:0034641,GO:0042450,GO:0043436,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0044283,GO:0044424,GO:0044464,GO:0046394,GO:0071704,GO:0071941,GO:1901564,GO:1901566,GO:1901576,GO:1901605,GO:1901607 2.1.3.3 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000001175 298.0
DYD1_k127_5324971_2 Arginine dihydrolase K01478 - 3.5.3.6 0.000000000000000000000000000000000000000000000000000000000000000000000000000002836 276.0
DYD1_k127_5324971_3 phosphoserine phosphatase activity K01768,K07315 - 3.1.3.3,4.6.1.1 0.0000000000000000000000000000000000000000000000004907 186.0
DYD1_k127_5324971_4 Methyltransferase domain K22309 - 2.1.1.344 0.000000000000000000000000000000000000000000005655 171.0
DYD1_k127_5324971_5 Belongs to the bacterial ribosomal protein bS21 family K02970 - - 0.000000000821 62.0
DYD1_k127_5324971_6 - - - - 0.00000135 61.0
DYD1_k127_5329388_0 PFAM Transcription termination factor nusG K05785 - - 0.000000000000000000002129 102.0
DYD1_k127_5329388_1 Belongs to the peptidase S8 family - - - 0.00000000002256 75.0
DYD1_k127_5329388_2 guanyl-nucleotide exchange factor activity - - - 0.00000002866 65.0
DYD1_k127_5329388_3 Heparinase II/III N-terminus - - - 0.0000002656 58.0
DYD1_k127_5329388_4 Polysaccharide biosynthesis protein K08679 - 5.1.3.6 0.000001761 53.0
DYD1_k127_533296_0 Belongs to the metallo-dependent hydrolases superfamily. DHOase family. Class I DHOase subfamily K01465 GO:0003674,GO:0003824,GO:0004038,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006139,GO:0006144,GO:0006145,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0009056,GO:0009112,GO:0009987,GO:0016787,GO:0016810,GO:0016812,GO:0019439,GO:0034641,GO:0044237,GO:0044238,GO:0044248,GO:0044270,GO:0044281,GO:0044424,GO:0044464,GO:0046113,GO:0046483,GO:0046700,GO:0055086,GO:0071704,GO:0072521,GO:0072523,GO:1901360,GO:1901361,GO:1901564,GO:1901565,GO:1901575 3.5.2.3 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002155 497.0
DYD1_k127_533296_1 nucleotidyltransferase activity K07076 - - 0.0000000000000004394 89.0
DYD1_k127_533296_2 HEPN domain - - - 0.0000000000001252 76.0
DYD1_k127_5345199_0 arylsulfatase A - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003037 406.0
DYD1_k127_5345199_1 protein kinase activity - - - 0.0000000000735 76.0
DYD1_k127_5345199_2 SMART RNA-processing protein HAT helix repeating-containing protein - - - 0.0000008647 57.0
DYD1_k127_5350647_0 Part of the Sec protein translocase complex. Interacts with the SecYEG preprotein conducting channel. SecDF uses the proton motive force (PMF) to complete protein translocation after the ATP-dependent function of SecA K03074 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004865 356.0
DYD1_k127_5350647_1 TIGRFAM TonB family K03832 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000118 304.0
DYD1_k127_5350647_2 Part of the Sec protein translocase complex. Interacts with the SecYEG preprotein conducting channel. SecDF uses the proton motive force (PMF) to complete protein translocation after the ATP-dependent function of SecA K03072 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000001256 252.0
DYD1_k127_5359148_0 Phospholipase/Carboxylesterase - - - 0.00000000000000000000000000000000000000000000000004481 190.0
DYD1_k127_5359148_1 Calx-beta domain - - - 0.0000000000000000003145 102.0
DYD1_k127_5380083_0 tRNA synthetases class II (D, K and N) K01893 - 6.1.1.22 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007537 519.0
DYD1_k127_5380083_1 Domain of unknown function (DUF4258) - - - 0.0000000000000000000000003556 107.0
DYD1_k127_5380083_2 - - - - 0.00000000000000000000005004 100.0
DYD1_k127_5383281_0 Aconitase C-terminal domain K01681 - 4.2.1.3 6.046e-309 959.0
DYD1_k127_5383281_1 dehydrogenase e1 component K00164 - 1.2.4.2 5.305e-201 639.0
DYD1_k127_5383281_2 AAA domain, putative AbiEii toxin, Type IV TA system - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000626 349.0
DYD1_k127_5386715_0 Allows the formation of correctly charged Gln-tRNA(Gln) through the transamidation of misacylated Glu-tRNA(Gln) in organisms which lack glutaminyl-tRNA synthetase. The reaction takes place in the presence of glutamine and ATP through an activated gamma-phospho-Glu-tRNA(Gln) K02433 - 6.3.5.6,6.3.5.7 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009986 530.0
DYD1_k127_5386715_1 Allows the formation of correctly charged Asn-tRNA(Asn) or Gln-tRNA(Gln) through the transamidation of misacylated Asp- tRNA(Asn) or Glu-tRNA(Gln) in organisms which lack either or both of asparaginyl-tRNA or glutaminyl-tRNA synthetases. The reaction takes place in the presence of glutamine and ATP through an activated phospho-Asp-tRNA(Asn) or phospho-Glu-tRNA(Gln) K02435 - 6.3.5.6,6.3.5.7 0.0000000000000000000004678 102.0
DYD1_k127_5386715_2 Belongs to the bacterial ribosomal protein bL28 family K02902 - - 0.0000000000000000004368 90.0
DYD1_k127_5422513_0 Protein kinase domain K12132 - 2.7.11.1 0.00000000000000000000000000000000000000000000000000000000000000001579 239.0
DYD1_k127_5422513_1 protein related to plant photosystem II stability assembly factor - - - 0.0000000000000000000002445 103.0
DYD1_k127_5422513_2 Sigma-70 region 2 - - - 0.000000000000008213 84.0
DYD1_k127_5422760_0 Belongs to the class-I aminoacyl-tRNA synthetase family K01869 GO:0003674,GO:0003824,GO:0004812,GO:0004823,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006082,GO:0006139,GO:0006399,GO:0006412,GO:0006418,GO:0006429,GO:0006518,GO:0006520,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0016070,GO:0016874,GO:0016875,GO:0019538,GO:0019752,GO:0034641,GO:0034645,GO:0034660,GO:0043038,GO:0043039,GO:0043043,GO:0043170,GO:0043436,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044281,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0071704,GO:0090304,GO:0140098,GO:0140101,GO:1901360,GO:1901564,GO:1901566,GO:1901576 6.1.1.4 5.562e-246 775.0
DYD1_k127_5422760_1 Beta-Casp domain K07576 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001439 476.0
DYD1_k127_5422760_2 - - - - 0.00000000000000000000000001415 120.0
DYD1_k127_5422760_4 PFAM O-Antigen K18814 - - 0.0001351 55.0
DYD1_k127_5432597_0 glycosyl transferase, family 2 K00752 - 2.4.1.212 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000045 329.0
DYD1_k127_5432597_1 helix_turn _helix lactose operon repressor K02529 - - 0.00000000000000000000000000000001502 139.0
DYD1_k127_5432597_2 PFAM Tetratricopeptide repeat - - - 0.0000000000398 72.0
DYD1_k127_5432597_3 Catalyzes the cleavage of 2-amino-3-ketobutyrate to glycine and acetyl-CoA K00639 - 2.3.1.29 0.000003476 48.0
DYD1_k127_5434506_0 Catalyzes the synthesis of beta-nicotinate D- ribonucleotide from nicotinate and 5-phospho-D-ribose 1-phosphate at the expense of ATP K00763 - 6.3.4.21 2.687e-209 662.0
DYD1_k127_5434506_1 isochorismatase hydrolase K08281 - 3.5.1.19 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000001677 284.0
DYD1_k127_5434506_2 Tetratricopeptide repeat - - - 0.00000000000000000002545 95.0
DYD1_k127_5434506_3 PFAM Phosphoribosyl transferase domain - - - 0.00000000001972 66.0
DYD1_k127_5440320_0 Protein tyrosine kinase K12132 - 2.7.11.1 0.00000000000000000000000000000000000000000000000000000000000000000000000000759 274.0
DYD1_k127_5500660_0 GMC oxidoreductase K03333 - 1.1.3.6 0.000000000000000000000000000000000000000000000000000000000002353 227.0
DYD1_k127_5500660_1 ASPIC and UnbV - - - 0.000000000000000000000000000000000000000000008628 184.0
DYD1_k127_5500660_2 Pyridoxal-phosphate dependent enzyme K01505,K05396,K19105 - 3.5.99.7,4.4.1.15,5.1.1.14 0.0000000000000000000000000000000000000000001342 173.0
DYD1_k127_5501209_0 TIGRFAM RNA polymerase sigma factor, sigma-70 family K03086,K03093 - - 0.000000000000000000000000000000006888 138.0
DYD1_k127_5501209_1 CAAX protease self-immunity K07052 - - 0.0000000000000000001007 98.0
DYD1_k127_5501209_2 Protein of unknown function (DUF1559) - - - 0.00000001632 65.0
DYD1_k127_5517627_0 Belongs to the N(4) N(6)-methyltransferase family K00590 - 2.1.1.113 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000159 539.0
DYD1_k127_5517627_1 Zgc 162297 K06971 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000008614 270.0
DYD1_k127_5517627_2 COG4422 Bacteriophage protein gp37 - - - 0.00000000000000000000000000000000000000000000000000000000000117 212.0
DYD1_k127_5517627_3 Protein of unknown function (DUF433) - - - 0.0000000000001773 73.0
DYD1_k127_5517627_4 - - - - 0.00000000006023 67.0
DYD1_k127_5520045_0 Type I phosphodiesterase / nucleotide pyrophosphatase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000179 412.0
DYD1_k127_5520332_0 COG1520 FOG WD40-like repeat - - - 0.00005912 55.0
DYD1_k127_5542269_0 PQQ-like domain - - - 0.00000163 60.0
DYD1_k127_5545802_0 Cytochrome c oxidase is the component of the respiratory chain that catalyzes the reduction of oxygen to water. Subunits 1- 3 form the functional core of the enzyme complex. CO I is the catalytic subunit of the enzyme. Electrons originating in cytochrome c are transferred via the copper A center of subunit 2 and heme A of subunit 1 to the bimetallic center formed by heme A3 and copper B K02274 - 1.9.3.1 6.585e-271 846.0
DYD1_k127_5545802_1 Subunits I and II form the functional core of the enzyme complex. Electrons originating in cytochrome c are transferred via heme a and Cu(A) to the binuclear center formed by heme a3 and Cu(B) K02275 - 1.9.3.1 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007498 334.0
DYD1_k127_5545802_2 signal sequence binding K07152 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000555 294.0
DYD1_k127_5545802_3 cytochrome c oxidase subunit III K02276 - 1.9.3.1 0.0000000000000000000000000000000000000000000000000000000000000003653 227.0
DYD1_k127_5545802_4 TIGRFAM Caa(3)-type oxidase, subunit IV K02277 - 1.9.3.1 0.00000000000147 75.0
DYD1_k127_5545802_5 - - - - 0.000006353 50.0
DYD1_k127_5556346_0 Tetratricopeptide repeat - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007056 530.0
DYD1_k127_5556346_1 Probably involved in the osmoprotection via the biosynthesis of trehalose and in the production of glycogen and alpha-glucan via the TreS-Pep2 branch involved in the biosynthesis of maltose-1-phosphate (M1P). Catalyzes the transfer of glucose from UDP-glucose (UDP-Glc) to D-glucose 6-phosphate (Glc-6-P) to form trehalose-6-phosphate. Probably also able to use ADP-Glc, CDP-Glc, GDP-Glc and TDP-Glc as glucosyl donors K00697,K16055 GO:0003674,GO:0003824,GO:0003825,GO:0005488,GO:0005575,GO:0005618,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005886,GO:0005975,GO:0005984,GO:0005991,GO:0005992,GO:0006793,GO:0006796,GO:0006950,GO:0008150,GO:0008152,GO:0008194,GO:0009058,GO:0009311,GO:0009312,GO:0009987,GO:0016020,GO:0016051,GO:0016311,GO:0016740,GO:0016757,GO:0016758,GO:0016787,GO:0016788,GO:0016791,GO:0030145,GO:0030312,GO:0033554,GO:0034637,GO:0035251,GO:0040007,GO:0042578,GO:0043167,GO:0043169,GO:0044237,GO:0044238,GO:0044249,GO:0044262,GO:0044424,GO:0044444,GO:0044464,GO:0046351,GO:0046527,GO:0046872,GO:0046914,GO:0047260,GO:0050896,GO:0051716,GO:0070413,GO:0071704,GO:0071944,GO:1901576 2.4.1.15,2.4.1.347,3.1.3.12 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007252 500.0
DYD1_k127_5556346_2 Trehalose-phosphatase K01087 - 3.1.3.12 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009051 376.0
DYD1_k127_5559902_0 - - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002599 357.0
DYD1_k127_5559902_1 - - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009311 345.0
DYD1_k127_5559902_2 CHASE2 K01768 - 4.6.1.1 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006856 305.0
DYD1_k127_5559902_3 - - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000001283 299.0
DYD1_k127_5559902_4 Protein of unknown function (DUF3307) - - - 0.000000000000000000000000000007599 126.0
DYD1_k127_5563680_0 Endonuclease/Exonuclease/phosphatase family - - - 0.00000000000000000000000000000000000000000000000000000001647 212.0
DYD1_k127_5563680_1 Thioredoxin-like - - - 0.00000000000000000004959 102.0
DYD1_k127_5569346_0 Fis Family K02584 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000105 373.0
DYD1_k127_5569346_1 - - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001703 316.0
DYD1_k127_5569346_10 tetratricopeptide repeat - - - 0.00001299 56.0
DYD1_k127_5569346_11 - - - - 0.00008006 54.0
DYD1_k127_5569346_2 Putative ATP-binding cassette K01992 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000001129 317.0
DYD1_k127_5569346_3 ABC-type multidrug transport system ATPase component K01990 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000007253 268.0
DYD1_k127_5569346_4 Catalyzes the interconversion of L-alanine and D- alanine. May also act on other amino acids K01775 - 5.1.1.1 0.000000000000000000000000000000000000000000000000000000000000000000001144 251.0
DYD1_k127_5569346_5 Conserved repeat domain - - - 0.000000000000000000000000000000000000000000000000142 201.0
DYD1_k127_5569346_6 TIGRFAM RNA polymerase sigma factor, sigma-70 family K03088 - - 0.00000000000000000000000000000000000000000000001862 179.0
DYD1_k127_5569346_7 AMMECR1 - - - 0.000000000000000000000000000000000000000009911 160.0
DYD1_k127_5569346_8 - - - - 0.0000000000000000000000000005187 128.0
DYD1_k127_5569346_9 DNA polymerase Ligase (LigD) - - - 0.0000000000000001112 85.0
DYD1_k127_559798_0 Catalyzes the reversible interconversion of isobutyryl- CoA and n-butyryl-CoA, using radical chemistry. Also exhibits GTPase activity, associated with its G-protein domain (MeaI) that functions as a chaperone that assists cofactor delivery and proper holo-enzyme assembly K01847 - 5.4.99.2 6.752e-216 676.0
DYD1_k127_559798_1 COG0513 Superfamily II DNA and RNA helicases K17675 - 3.6.4.13 0.000000000000000000000000000000000000000000000000000000000000000000000002556 247.0
DYD1_k127_559798_2 helicase superfamily c-terminal domain K17675 - 3.6.4.13 0.0000000004135 69.0
DYD1_k127_5624832_0 Cys/Met metabolism PLP-dependent enzyme K01739,K01758,K01760,K01761 GO:0000096,GO:0000097,GO:0003674,GO:0003824,GO:0003962,GO:0004123,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005886,GO:0006082,GO:0006520,GO:0006534,GO:0006555,GO:0006790,GO:0006807,GO:0008150,GO:0008152,GO:0008652,GO:0009058,GO:0009066,GO:0009067,GO:0009069,GO:0009070,GO:0009086,GO:0009092,GO:0009987,GO:0016020,GO:0016053,GO:0016740,GO:0016765,GO:0016829,GO:0016846,GO:0017144,GO:0019279,GO:0019343,GO:0019344,GO:0019752,GO:0043436,GO:0044237,GO:0044238,GO:0044249,GO:0044272,GO:0044281,GO:0044283,GO:0044424,GO:0044444,GO:0044464,GO:0046394,GO:0071265,GO:0071266,GO:0071704,GO:0071944,GO:1901564,GO:1901566,GO:1901576,GO:1901605,GO:1901607 2.5.1.48,4.4.1.1,4.4.1.11,4.4.1.8 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001383 496.0
DYD1_k127_5624832_1 Cystathionine beta-synthase K01697 GO:0003674,GO:0005488,GO:0005575,GO:0005576,GO:0005618,GO:0005622,GO:0005623,GO:0005737,GO:0005886,GO:0008144,GO:0016020,GO:0019842,GO:0030170,GO:0030312,GO:0036094,GO:0043167,GO:0043168,GO:0044424,GO:0044464,GO:0048037,GO:0050662,GO:0070279,GO:0071944,GO:0097159,GO:1901363 4.2.1.22 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005816 494.0
DYD1_k127_5624832_2 Alanine dehydrogenase/PNT, N-terminal domain K00324 - 1.6.1.2 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004745 382.0
DYD1_k127_5624832_3 SMART Tetratricopeptide - - - 0.00000000000000000000000000000000000000000000000000000000004057 223.0
DYD1_k127_5624832_4 HNH nucleases - - - 0.0000000000000000000000000000000000000000001739 166.0
DYD1_k127_5624832_5 NAD(P)+ transhydrogenase (AB-specific) activity K00324 - 1.6.1.2 0.000000000000000000000000000000008655 131.0
DYD1_k127_5624832_6 The transhydrogenation between NADH and NADP is coupled to respiration and ATP hydrolysis and functions as a proton pump across the membrane K00325 - 1.6.1.2 0.000000000000000000002144 95.0
DYD1_k127_5624832_7 - - - - 0.000000000000000002559 87.0
DYD1_k127_5624832_8 Belongs to the sigma-70 factor family. ECF subfamily K03088 - - 0.0000000001713 73.0
DYD1_k127_5625108_0 Kelch motif - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000481 450.0
DYD1_k127_5625108_1 radical SAM domain protein - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000009538 304.0
DYD1_k127_5625108_2 Alpha beta hydrolase - - - 0.0000000000000000000000000000000000000000000000000000000001102 216.0
DYD1_k127_5625108_3 Protein of unknown function, DUF488 - - - 0.00000000000000000000000000000000000000000000000000005425 196.0
DYD1_k127_5625108_4 PFAM Kelch motif - - - 0.0000000000000000000000003078 110.0
DYD1_k127_5625108_6 PFAM alkyl hydroperoxide reductase Thiol specific antioxidant Mal allergen - - - 0.000000000000318 73.0
DYD1_k127_5625108_7 Protein of unknown function (DUF1559) - - - 0.00000000008992 72.0
DYD1_k127_5625108_8 alkyl hydroperoxide reductase Thiol specific antioxidant Mal allergen - - - 0.00000002245 57.0
DYD1_k127_5625108_9 Glycosyl transferases group 1 - - - 0.00004567 47.0
DYD1_k127_5646471_0 CoA enzyme activase uncharacterised domain (DUF2229) - - - 0.0 1492.0
DYD1_k127_5646471_1 4 iron, 4 sulfur cluster binding - - - 4.656e-197 631.0
DYD1_k127_5646471_2 Protein of unknown function (DUF1501) - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003785 523.0
DYD1_k127_5646471_3 N-4 methylation of cytosine K00571 - 2.1.1.72 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000166 376.0
DYD1_k127_5646471_4 Membrane - - - 0.0000000000000000000000000000000000000000000003765 177.0
DYD1_k127_5646471_5 Protein of unknown function (DUF559) - - - 0.0000000000000000000000007858 108.0
DYD1_k127_5646471_6 - - - - 0.00000000000000003386 84.0
DYD1_k127_5646471_7 TIGRFAM clan AA aspartic protease, AF_0612 family - - - 0.000000001123 62.0
DYD1_k127_5649322_0 associated with various cellular activities K03924 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002546 442.0
DYD1_k127_5649322_1 von Willebrand factor (vWF) type A domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001126 397.0
DYD1_k127_5649322_2 Large extracellular alpha-helical protein - - - 0.000000000000000000000000000000000000000000000000000000000000000000001132 243.0
DYD1_k127_5649322_3 Aerotolerance regulator N-terminal - - - 0.0000000000000000000000000000000000000000000000000000000000001048 239.0
DYD1_k127_5649322_4 Protein of unknown function DUF58 - - - 0.00000000000000000000000000000000000000000000000000002005 194.0
DYD1_k127_5649322_5 nuclear chromosome segregation - - - 0.00000000000000000000000000000000007692 153.0
DYD1_k127_5649322_6 protein (some members contain a von Willebrand factor type A (vWA) domain) - - - 0.000000000000000000000000002914 115.0
DYD1_k127_5665130_0 Sodium/hydrogen exchanger family - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003685 554.0
DYD1_k127_5665130_1 Type II secretory pathway component PulF K02653 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002629 441.0
DYD1_k127_5665130_2 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III K01840,K03431,K15778 - 5.4.2.10,5.4.2.2,5.4.2.8 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003695 387.0
DYD1_k127_5665130_3 Transfers the fatty acyl group on membrane lipoproteins K03820 - - 0.00000000000000000000000000000000000000000000000000000000000000000217 252.0
DYD1_k127_5665130_4 Involved in the regulation of the intracellular balance of NAD and NADP, and is a key enzyme in the biosynthesis of NADP. Catalyzes specifically the phosphorylation on 2'-hydroxyl of the adenosine moiety of NAD to yield NADP K00858 - 2.7.1.23 0.000000000000000000000000000000000000000000001798 175.0
DYD1_k127_5665130_5 Histidine kinase - - - 0.0000000000000000000000000000000000004239 152.0
DYD1_k127_5665130_6 membrane K00389 - - 0.0000000001467 68.0
DYD1_k127_5665130_7 Acetyltransferase (GNAT) family - - - 0.000000002849 68.0
DYD1_k127_5665130_9 Pkd domain containing protein - - - 0.0007249 51.0
DYD1_k127_5669464_0 4-amino-4-deoxy-L-arabinose transferase activity - - - 0.00000000000000000000000000000000000001004 164.0
DYD1_k127_5669464_1 Alpha beta hydrolase fold - - - 0.00000000000000000000000000000000008509 145.0
DYD1_k127_5669464_2 Belongs to the small heat shock protein (HSP20) family K13993 - - 0.0000000000000000000009963 100.0
DYD1_k127_5669464_3 Belongs to the acylphosphatase family K01512 - 3.6.1.7 0.00000000000000001785 85.0
DYD1_k127_5670754_0 Catalyzes the hydrolysis of inorganic pyrophosphate (PPi) forming two phosphate ions K01507 - 3.6.1.1 0.0000000000000000000000000000000000000000000000000000000001631 208.0
DYD1_k127_5670754_1 PhoD-like phosphatase K01113 - 3.1.3.1 0.000000000000000000000000000000000000000000000000000000001704 211.0
DYD1_k127_5679559_0 Involved in the biosynthesis of osmoregulated periplasmic glucans (OPGs) K03670 GO:0000271,GO:0005575,GO:0005623,GO:0005975,GO:0005976,GO:0006073,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009250,GO:0009987,GO:0016051,GO:0030288,GO:0030313,GO:0031975,GO:0033692,GO:0034637,GO:0034645,GO:0042597,GO:0043170,GO:0044042,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044262,GO:0044264,GO:0044464,GO:0051273,GO:0051274,GO:0071704,GO:1901576 - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002769 385.0
DYD1_k127_5679559_1 Involved in the biosynthesis of osmoregulated periplasmic glucans (OPGs) K03670 - - 0.000000000000000000000000000000000000004636 149.0
DYD1_k127_5682957_0 Facilitates transcription termination by a mechanism that involves Rho binding to the nascent RNA, activation of Rho's RNA-dependent ATPase activity, and release of the mRNA from the DNA template K03628 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002315 342.0
DYD1_k127_5709811_0 PFAM Methyltransferase type 11 K07755 - 2.1.1.137 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003088 481.0
DYD1_k127_5709811_1 Serine aminopeptidase, S33 K06889 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000554 313.0
DYD1_k127_5709811_2 PFAM Tyrosinase K00422,K00505 - 1.10.3.1,1.14.18.1 0.0003578 51.0
DYD1_k127_5729851_0 Evidence 3 Function proposed based on presence of conserved amino acid motif, structural feature or limited homology - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000274 322.0
DYD1_k127_5729851_1 Belongs to the agmatine deiminase family K10536 - 3.5.3.12 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001221 314.0
DYD1_k127_5729851_2 COG0534 Na -driven multidrug efflux pump - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000001189 265.0
DYD1_k127_5729851_3 N-carbamoylputrescine amidase K12251 - 3.5.1.53 0.00000000000000000000000000000000000000000000000000000000000004556 218.0
DYD1_k127_5756445_0 SMART Tetratricopeptide - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005778 321.0
DYD1_k127_5756445_1 involved in cell wall biogenesis - - - 0.000000000000000000000000000000000000000000000000000000000000000000001036 245.0
DYD1_k127_5756445_2 Type IV leader peptidase family K02278 - 3.4.23.43 0.00000000000000000000131 102.0
DYD1_k127_5756445_3 TadE-like protein - - - 0.000000000000003433 86.0
DYD1_k127_5756445_4 - - - - 0.00000001195 59.0
DYD1_k127_5756445_5 Uncharacterized conserved protein (DUF2304) K09153 - - 0.0000001009 62.0
DYD1_k127_5756445_6 Belongs to the peptidase S1C family K04772 - - 0.000000303 62.0
DYD1_k127_576157_0 Catalyzes the NAD(P)-dependent oxidation of 4- (phosphohydroxy)-L-threonine (HTP) into 2-amino-3-oxo-4- (phosphohydroxy)butyric acid which spontaneously decarboxylates to form 3-amino-2-oxopropyl phosphate (AHAP) K00097,K22024 - 1.1.1.262,1.1.1.408,1.1.1.409 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000001957 287.0
DYD1_k127_576157_1 mannose-ethanolamine phosphotransferase activity - - - 0.0000000000000000000008861 101.0
DYD1_k127_5764844_0 Pyridoxal-phosphate dependent enzyme K01733 - 4.2.3.1 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001253 510.0
DYD1_k127_5764844_1 Catalyzes the condensation of pantoate with beta-alanine in an ATP-dependent reaction via a pantoyl-adenylate intermediate K01918 GO:0003674,GO:0003824,GO:0004592,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006082,GO:0006520,GO:0006573,GO:0006575,GO:0006732,GO:0006766,GO:0006767,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009081,GO:0009108,GO:0009110,GO:0009987,GO:0015939,GO:0015940,GO:0016053,GO:0016874,GO:0016879,GO:0016881,GO:0019752,GO:0032787,GO:0033317,GO:0034641,GO:0042364,GO:0042398,GO:0043436,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0044283,GO:0044424,GO:0044444,GO:0044464,GO:0046394,GO:0051186,GO:0051188,GO:0071704,GO:0072330,GO:1901564,GO:1901566,GO:1901576,GO:1901605 6.3.2.1 0.000000000000000000000000000000000000000000000000000000000000000000000000000000002919 280.0
DYD1_k127_5764844_2 PFAM Peptidoglycan-binding domain 1 protein K02450 GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005886,GO:0016020,GO:0044424,GO:0044444,GO:0044464,GO:0071944 - 0.000000000000000000000000000000000000000000000000000000006817 229.0
DYD1_k127_5764844_3 Transfers the N-acyl diglyceride group on what will become the N-terminal cysteine of membrane lipoproteins K13292 - - 0.000000000000000000000000000000000005738 152.0
DYD1_k127_5764844_4 export protein K01991 - - 0.000000000000002403 85.0
DYD1_k127_5764844_5 2-amino-4-hydroxy-6-hydroxymethyldihydropteridine diphosphokinase K00950 - 2.7.6.3 0.000000002715 58.0
DYD1_k127_5765693_1 AAA domain, putative AbiEii toxin, Type IV TA system - - - 0.000000000000000000000000000000000000005322 162.0
DYD1_k127_5765693_2 Converts 2C-methyl-D-erythritol 2,4-cyclodiphosphate (ME-2,4cPP) into 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate K03526 GO:0003674,GO:0003824,GO:0006081,GO:0006082,GO:0006090,GO:0006629,GO:0006644,GO:0006720,GO:0006793,GO:0006796,GO:0008150,GO:0008152,GO:0008299,GO:0008610,GO:0008654,GO:0009058,GO:0009240,GO:0009987,GO:0016491,GO:0016725,GO:0019288,GO:0019637,GO:0019682,GO:0019752,GO:0032787,GO:0043436,GO:0044237,GO:0044238,GO:0044249,GO:0044255,GO:0044281,GO:0046429,GO:0046490,GO:0052592,GO:0055114,GO:0071704,GO:0090407,GO:1901135,GO:1901576 1.17.7.1,1.17.7.3 0.0000000000000000000000000000000000004451 143.0
DYD1_k127_5765693_4 - - - - 0.00000000000005711 74.0
DYD1_k127_5765693_5 - - - - 0.0000000001243 62.0
DYD1_k127_5765693_6 deoxyhypusine monooxygenase activity - - - 0.0001254 55.0
DYD1_k127_5765693_7 - - - - 0.0009165 42.0
DYD1_k127_5766816_0 Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family K07787 - - 0.0 1218.0
DYD1_k127_5766816_1 Endonuclease I - - - 4.235e-205 661.0
DYD1_k127_5766816_2 elongation factor G K02355 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001997 566.0
DYD1_k127_5766816_3 Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family K07798,K15727 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001509 465.0
DYD1_k127_5766816_4 MgtE intracellular N domain K06213 - - 0.0000000000000000000000000000000000000000000000000000000000003477 228.0
DYD1_k127_5766816_5 unsaturated chondroitin disaccharide hydrolase activity K01727,K13381 GO:0003674,GO:0003824,GO:0004553,GO:0004568,GO:0005575,GO:0005623,GO:0008843,GO:0016787,GO:0016798,GO:0030288,GO:0030313,GO:0031975,GO:0042597,GO:0044464 3.2.1.14,3.2.1.17,4.2.2.1 0.0000000000000000008676 102.0
DYD1_k127_5766816_6 Outer membrane efflux protein - - - 0.000000000002172 72.0
DYD1_k127_5766816_7 lipid A biosynthesis acyltransferase K02517,K22311 - 2.3.1.241,2.3.1.265 0.000000001645 69.0
DYD1_k127_5766816_8 Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family K07798 - - 0.0000004753 61.0
DYD1_k127_5766816_9 YHS domain - - - 0.000001478 60.0
DYD1_k127_577013_0 Aldo/keto reductase family - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000109 520.0
DYD1_k127_577013_1 integral membrane protein - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008603 361.0
DYD1_k127_577013_2 Bidirectionally degrades single-stranded DNA into large acid-insoluble oligonucleotides, which are then degraded further into small acid-soluble oligonucleotides K03601 - 3.1.11.6 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001254 347.0
DYD1_k127_577013_3 KDPG and KHG aldolase - - - 0.0000000000000000000000000000000000000000000001615 175.0
DYD1_k127_577013_4 Acetyltransferase (GNAT) domain - - - 0.000000000001284 71.0
DYD1_k127_5782988_0 COG1360 Flagellar motor protein K02557 - - 0.0000000000000000000000000000000000000827 153.0
DYD1_k127_5782988_1 - - - - 0.0000000000000000000008007 100.0
DYD1_k127_5782988_2 helix_turn_helix, Arsenical Resistance Operon Repressor - - - 0.00000000000002883 79.0
DYD1_k127_579688_0 Belongs to the class-II aminoacyl-tRNA synthetase family K04567 - 6.1.1.6 0.000000000000000000000000000000000000000001872 162.0
DYD1_k127_579688_1 Belongs to the sigma-70 factor family. ECF subfamily K03088 - - 0.0000000000000000000000000002739 122.0
DYD1_k127_579688_2 beta-N-acetylhexosaminidase activity - - - 0.00000000000000000000000007794 115.0
DYD1_k127_579688_3 AntiSigma factor - - - 0.0000001025 63.0
DYD1_k127_5825697_0 Low-affinity potassium transport system. Interacts with Trk system potassium uptake protein TrkA K03498 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006515 544.0
DYD1_k127_5825697_1 belongs to the thioredoxin family K20444,K20543 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000349 430.0
DYD1_k127_5825697_2 TrkA-N domain K03499 - - 0.000000000000000004345 85.0
DYD1_k127_5825697_3 TIGRFAM potassium uptake protein, TrkH family K03498 - - 0.000000000002716 76.0
DYD1_k127_5834865_0 Peptide chain release factor 2 directs the termination of translation in response to the peptide chain termination codons UGA and UAA K02836 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000002748 286.0
DYD1_k127_5834865_1 Lipopolysaccharide kinase (Kdo/WaaP) family - - - 0.000000000000000000000008487 116.0
DYD1_k127_5848791_0 protein kinase activity - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000004525 277.0
DYD1_k127_5848791_1 Catalyzes the opening and hydrolysis of the beta-lactam ring of beta-lactam antibiotics such as penicillins and cephalosporins - - - 0.0000000000000000000000000000000000000000000000000000000000000001308 228.0
DYD1_k127_5854881_0 Subtilase family - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000001935 330.0
DYD1_k127_587241_0 Involved in the gluconeogenesis. Catalyzes stereospecifically the conversion of dihydroxyacetone phosphate (DHAP) to D-glyceraldehyde-3-phosphate (G3P) K01803 - 5.3.1.1 0.0000000000000000000000000000000000000000000000000000000000000000000000000000006764 272.0
DYD1_k127_587241_1 stress-induced protein - - - 0.00000000000000000000000000000000002539 144.0
DYD1_k127_587241_2 PFAM Preprotein translocase SecG subunit K03075 - - 0.000000000001034 74.0
DYD1_k127_5873759_0 - K01179 - 3.2.1.4 0.0000000000000000000000000000000000003078 161.0
DYD1_k127_5873759_1 - - - - 0.000000005043 68.0
DYD1_k127_590596_0 Biotin carboxylase K01961 - 6.3.4.14,6.4.1.2 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001083 454.0
DYD1_k127_590596_1 PFAM UbiA prenyltransferase - - - 0.000000000000000000000000000000000000000000000000000000000000401 223.0
DYD1_k127_590596_2 DNA-templated transcription, initiation - - - 0.00000000000000009237 88.0
DYD1_k127_590596_3 Trypsin K04771 GO:0003674,GO:0003824,GO:0004175,GO:0004252,GO:0005488,GO:0005515,GO:0005575,GO:0005623,GO:0005886,GO:0005887,GO:0006457,GO:0006508,GO:0006515,GO:0006807,GO:0006950,GO:0006979,GO:0008150,GO:0008152,GO:0008233,GO:0008236,GO:0009056,GO:0009057,GO:0009266,GO:0009408,GO:0009628,GO:0009897,GO:0009986,GO:0009987,GO:0016020,GO:0016021,GO:0016787,GO:0017171,GO:0019538,GO:0030163,GO:0030288,GO:0030313,GO:0031224,GO:0031226,GO:0031233,GO:0031975,GO:0042597,GO:0042802,GO:0043170,GO:0044237,GO:0044238,GO:0044248,GO:0044257,GO:0044260,GO:0044265,GO:0044267,GO:0044425,GO:0044459,GO:0044464,GO:0050896,GO:0051603,GO:0061077,GO:0070011,GO:0071575,GO:0071704,GO:0071944,GO:0098552,GO:0140096,GO:1901564,GO:1901565,GO:1901575 3.4.21.107 0.000001305 61.0
DYD1_k127_5920673_0 Belongs to the DegT DnrJ EryC1 family K12452,K13010 - 1.17.1.1,2.6.1.102 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002427 418.0
DYD1_k127_5920673_1 Domain of unknown function (DUF4405) - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001604 312.0
DYD1_k127_5920673_2 Protein of unknown function (DUF1460) - - - 0.0000000000000000000000000000000000009777 145.0
DYD1_k127_5920673_3 Rieske [2Fe-2S] domain K02636 - 1.10.9.1 0.000000000000000000000000000000008053 141.0
DYD1_k127_5920673_4 HEAT repeat - - - 0.00002631 56.0
DYD1_k127_5920673_5 - - - - 0.0006429 45.0
DYD1_k127_5923598_1 - - - - 0.0000000000000000000000000008627 117.0
DYD1_k127_5923598_2 phosphoglycolate phosphatase activity - - - 0.00000000000000000000000009126 108.0
DYD1_k127_5927920_0 Enoyl-(Acyl carrier protein) reductase K00059 - 1.1.1.100 0.00000000000000000000000000000000000001486 152.0
DYD1_k127_5927920_1 calcium- and calmodulin-responsive adenylate cyclase activity - - - 0.000000000000000000000558 113.0
DYD1_k127_5927920_2 amino acid activation for nonribosomal peptide biosynthetic process K06045 - 4.2.1.129,5.4.99.17 0.00000001438 69.0
DYD1_k127_5927920_3 Domain of unknown function (DUF4397) - - - 0.000003549 61.0
DYD1_k127_5932860_0 Virulence factor mviN K03980 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000003958 288.0
DYD1_k127_5932860_1 Domain of unknown function (DUF4386) - - - 0.0000003592 53.0
DYD1_k127_5935155_0 Serine dehydrogenase proteinase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003432 409.0
DYD1_k127_5935155_1 YXWGXW repeat (2 copies) - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005207 391.0
DYD1_k127_5935155_2 Protein of unknown function, DUF255 K06888 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000003994 270.0
DYD1_k127_5935155_3 2-phosphosulpholactate phosphatase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000001863 263.0
DYD1_k127_5935155_4 Catalyzes the conversion of epoxyqueuosine (oQ) to queuosine (Q), which is a hypermodified base found in the wobble positions of tRNA(Asp), tRNA(Asn), tRNA(His) and tRNA(Tyr) K18979 - 1.17.99.6 0.00000000000000000000000000000000000000000000000000000000000001556 230.0
DYD1_k127_5935155_5 Putative prokaryotic signal transducing protein - - - 0.00002097 54.0
DYD1_k127_5959445_0 PFAM GH3 auxin-responsive promoter - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007393 454.0
DYD1_k127_5959445_1 Alpha/beta hydrolase family - - - 0.00000000000000000000000000000000000000000000000000009376 202.0
DYD1_k127_5959445_2 Cell division protein that is involved in the assembly of the Z ring. May serve as a membrane anchor for the Z ring K03590 - - 0.000000001835 61.0
DYD1_k127_5977039_0 NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient K00331 - 1.6.5.3 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000003249 282.0
DYD1_k127_5977039_1 4Fe-4S dicluster domain K00338 - 1.6.5.3 0.0000000000000000000000000000000000007728 149.0
DYD1_k127_5977039_2 NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be a menaquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient K00330 - 1.6.5.3 0.000000000000000000000000000005003 124.0
DYD1_k127_5977039_3 general secretion pathway protein G K02456 - - 0.000000000000000006865 89.0
DYD1_k127_5977039_4 Type 4 fimbrial assembly protein pilC K02455,K02653 - - 0.000001171 51.0
DYD1_k127_5977039_6 - - - - 0.0002112 52.0
DYD1_k127_5977039_7 Tetratricopeptide repeat - - - 0.0005953 52.0
DYD1_k127_5977416_0 carboxylic acid catabolic process K18334 - 4.2.1.68 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005982 365.0
DYD1_k127_5977416_1 Amino acid permease - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003231 347.0
DYD1_k127_6014183_0 DNA methylase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002182 365.0
DYD1_k127_6014183_1 Can catalyze the hydrolysis of ATP in the presence of single-stranded DNA, the ATP-dependent uptake of single-stranded DNA by duplex DNA, and the ATP-dependent hybridization of homologous single-stranded DNAs. It interacts with LexA causing its activation and leading to its autocatalytic cleavage K03553 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000002549 281.0
DYD1_k127_6017619_0 radical SAM domain protein - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004896 308.0
DYD1_k127_6017619_1 PhoD-like phosphatase - - - 0.000000000001875 70.0
DYD1_k127_60204_0 The central subunit of the protein translocation channel SecYEG. Consists of two halves formed by TMs 1-5 and 6-10. These two domains form a lateral gate at the front which open onto the bilayer between TMs 2 and 7, and are clamped together by SecE at the back. The channel is closed by both a pore ring composed of hydrophobic SecY resides and a short helix (helix 2A) on the extracellular side of the membrane which forms a plug. The plug probably moves laterally to allow the channel to open. The ring and the pore may move independently K03076 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001302 536.0
DYD1_k127_60204_1 DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates K03040 GO:0003674,GO:0003824,GO:0003899,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006139,GO:0006351,GO:0006354,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0016070,GO:0016740,GO:0016772,GO:0016779,GO:0018130,GO:0019438,GO:0032774,GO:0034062,GO:0034641,GO:0034645,GO:0034654,GO:0043170,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044271,GO:0044424,GO:0044464,GO:0046483,GO:0071704,GO:0090304,GO:0097659,GO:0097747,GO:0140098,GO:1901360,GO:1901362,GO:1901576 2.7.7.6 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004405 351.0
DYD1_k127_60204_10 Binds 23S rRNA and is also seen to make contacts with the A and possibly P site tRNAs K02878 GO:0003674,GO:0003676,GO:0003723,GO:0003735,GO:0005198,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0015934,GO:0019843,GO:0022625,GO:0022626,GO:0032991,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:0097159,GO:1901363,GO:1990904 - 0.0000000000000000000000000000000000000000000000000647 182.0
DYD1_k127_60204_11 Binds to 23S rRNA. Forms part of two intersubunit bridges in the 70S ribosome K02874 GO:0003674,GO:0003676,GO:0003723,GO:0003735,GO:0005198,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0015934,GO:0019843,GO:0022625,GO:0022626,GO:0032991,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:0070180,GO:0097159,GO:1901363,GO:1990904 - 0.000000000000000000000000000000000000000000000001844 176.0
DYD1_k127_60204_12 Located at the back of the 30S subunit body where it stabilizes the conformation of the head with respect to the body K02988 GO:0003674,GO:0003735,GO:0005198,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0006412,GO:0006518,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0015935,GO:0019538,GO:0022626,GO:0022627,GO:0032991,GO:0034641,GO:0034645,GO:0043043,GO:0043170,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:0071704,GO:1901564,GO:1901566,GO:1901576,GO:1990904 - 0.000000000000000000000000000000000000000000000277 177.0
DYD1_k127_60204_13 One of the primary rRNA binding proteins, it binds directly to 16S rRNA central domain where it helps coordinate assembly of the platform of the 30S subunit K02994 - - 0.0000000000000000000000000000000000000004468 152.0
DYD1_k127_60204_14 Protein S19 forms a complex with S13 that binds strongly to the 16S ribosomal RNA K02965 GO:0000028,GO:0003674,GO:0003735,GO:0005198,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0006996,GO:0008150,GO:0009987,GO:0015935,GO:0016043,GO:0022607,GO:0022613,GO:0022618,GO:0022626,GO:0022627,GO:0032991,GO:0034622,GO:0042254,GO:0042255,GO:0042274,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043933,GO:0044085,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:0065003,GO:0070925,GO:0071826,GO:0071840,GO:1990904 - 0.00000000000000000000000000000000001578 136.0
DYD1_k127_60204_15 PFAM Histidine triad (HIT) protein K02503 - - 0.00000000000000000000000000000000002716 139.0
DYD1_k127_60204_16 Binds to the 23S rRNA K02876 - - 0.00000000000000000000000000000000004545 142.0
DYD1_k127_60204_17 This is one of the proteins that binds and probably mediates the attachment of the 5S RNA into the large ribosomal subunit, where it forms part of the central protuberance K02881 GO:0003674,GO:0003676,GO:0003723,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0008097,GO:0015934,GO:0019843,GO:0022625,GO:0022626,GO:0032991,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:0097159,GO:1901363,GO:1990904 - 0.000000000000000000000000000000002577 132.0
DYD1_k127_60204_18 The globular domain of the protein is located near the polypeptide exit tunnel on the outside of the subunit, while an extended beta-hairpin is found that lines the wall of the exit tunnel in the center of the 70S ribosome K02890 GO:0003674,GO:0003735,GO:0005198,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0015934,GO:0022625,GO:0022626,GO:0032991,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:1990904 - 0.00000000000000000000000000001974 120.0
DYD1_k127_60204_19 One of the proteins that surrounds the polypeptide exit tunnel on the outside of the subunit K02895 - - 0.0000000000000000000000002989 109.0
DYD1_k127_60204_2 Methionine aminopeptidase K01265 - 3.4.11.18 0.0000000000000000000000000000000000000000000000000000000000000000000000000004357 266.0
DYD1_k127_60204_20 ribosomal protein l17 K02879 GO:0003674,GO:0003735,GO:0005198,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0015934,GO:0022625,GO:0022626,GO:0032991,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:1990904 - 0.00000000000000000000002171 109.0
DYD1_k127_60204_21 One of the primary rRNA binding proteins, it binds specifically to the 5'-end of 16S ribosomal RNA K02961 GO:0003674,GO:0003735,GO:0005198,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0006412,GO:0006518,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0015935,GO:0019538,GO:0022626,GO:0022627,GO:0032991,GO:0034641,GO:0034645,GO:0043043,GO:0043170,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:0071704,GO:1901564,GO:1901566,GO:1901576,GO:1990904 - 0.000000000000000000001467 97.0
DYD1_k127_60204_22 Binds 16S rRNA, required for the assembly of 30S particles and may also be responsible for determining the conformation of the 16S rRNA at the A site K02954 - - 0.000000000000000000003839 93.0
DYD1_k127_60204_23 Belongs to the bacterial ribosomal protein bL36 family K02919 - - 0.0000000000002909 70.0
DYD1_k127_60204_24 Belongs to the universal ribosomal protein uL29 family K02904 GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0015934,GO:0022625,GO:0022626,GO:0032991,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:1990904 - 0.00001681 50.0
DYD1_k127_60204_3 Binds the lower part of the 30S subunit head. Binds mRNA in the 70S ribosome, positioning it for translation K02982 GO:0002181,GO:0003674,GO:0003735,GO:0005198,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0006412,GO:0006518,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0015935,GO:0019538,GO:0022626,GO:0022627,GO:0032991,GO:0034641,GO:0034645,GO:0043043,GO:0043170,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:0071704,GO:1901564,GO:1901566,GO:1901576,GO:1990904 - 0.000000000000000000000000000000000000000000000000000000000000000000000000002754 259.0
DYD1_k127_60204_4 This is 1 of the proteins that binds and probably mediates the attachment of the 5S RNA into the large ribosomal subunit, where it forms part of the central protuberance. In the 70S ribosome it contacts protein S13 of the 30S subunit (bridge B1b), connecting the 2 subunits K02931 GO:0000027,GO:0003674,GO:0003676,GO:0003723,GO:0003735,GO:0005198,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0006412,GO:0006518,GO:0006807,GO:0006996,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0015934,GO:0016043,GO:0019538,GO:0022607,GO:0022613,GO:0022618,GO:0022625,GO:0022626,GO:0032991,GO:0034622,GO:0034641,GO:0034645,GO:0042254,GO:0042255,GO:0042273,GO:0043043,GO:0043170,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043603,GO:0043604,GO:0043933,GO:0044085,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:0065003,GO:0070925,GO:0071704,GO:0071826,GO:0071840,GO:0097159,GO:1901363,GO:1901564,GO:1901566,GO:1901576,GO:1990904 - 0.00000000000000000000000000000000000000000000000000000000000000000000002032 246.0
DYD1_k127_60204_5 Catalyzes the reversible transfer of the terminal phosphate group between ATP and AMP. Plays an important role in cellular energy homeostasis and in adenine nucleotide metabolism K00939 - 2.7.4.3 0.0000000000000000000000000000000000000000000000000000000000000002007 234.0
DYD1_k127_60204_6 Located on the platform of the 30S subunit, it bridges several disparate RNA helices of the 16S rRNA. Forms part of the Shine-Dalgarno cleft in the 70S ribosome K02948 GO:0000028,GO:0000462,GO:0003674,GO:0003676,GO:0003723,GO:0003729,GO:0003735,GO:0005198,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0006139,GO:0006364,GO:0006396,GO:0006412,GO:0006518,GO:0006725,GO:0006807,GO:0006996,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0015935,GO:0016043,GO:0016070,GO:0016072,GO:0019538,GO:0019843,GO:0022607,GO:0022613,GO:0022618,GO:0022626,GO:0022627,GO:0030490,GO:0032991,GO:0034470,GO:0034622,GO:0034641,GO:0034645,GO:0034660,GO:0042254,GO:0042255,GO:0042274,GO:0043043,GO:0043170,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043603,GO:0043604,GO:0043933,GO:0044085,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:0046483,GO:0048027,GO:0065003,GO:0070181,GO:0070925,GO:0071704,GO:0071826,GO:0071840,GO:0090304,GO:0097159,GO:1901360,GO:1901363,GO:1901564,GO:1901566,GO:1901576,GO:1990904 - 0.000000000000000000000000000000000000000000000000000001091 194.0
DYD1_k127_60204_7 This protein binds to the 23S rRNA, and is important in its secondary structure. It is located near the subunit interface in the base of the L7 L12 stalk, and near the tRNA binding site of the peptidyltransferase center K02933 GO:0002181,GO:0003674,GO:0003676,GO:0003723,GO:0003735,GO:0005198,GO:0005488,GO:0005575,GO:0005618,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0005886,GO:0006412,GO:0006518,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0015934,GO:0016020,GO:0019538,GO:0022625,GO:0022626,GO:0030312,GO:0032991,GO:0034641,GO:0034645,GO:0040007,GO:0043043,GO:0043170,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:0071704,GO:0071944,GO:0097159,GO:1901363,GO:1901564,GO:1901566,GO:1901576,GO:1990904 - 0.0000000000000000000000000000000000000000000000000000173 194.0
DYD1_k127_60204_8 Located at the top of the head of the 30S subunit, it contacts several helices of the 16S rRNA. In the 70S ribosome it contacts the 23S rRNA (bridge B1a) and protein L5 of the 50S subunit (bridge B1b), connecting the 2 subunits K02952 GO:0003674,GO:0003735,GO:0005198,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0006412,GO:0006518,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0015935,GO:0019538,GO:0022613,GO:0032991,GO:0034641,GO:0034645,GO:0042254,GO:0043043,GO:0043170,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043603,GO:0043604,GO:0044085,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044446,GO:0044464,GO:0071704,GO:0071840,GO:1901564,GO:1901566,GO:1901576,GO:1990904 - 0.000000000000000000000000000000000000000000000000007155 183.0
DYD1_k127_60204_9 One of the primary rRNA binding proteins. Required for association of the 30S and 50S subunits to form the 70S ribosome, for tRNA binding and peptide bond formation. It has been suggested to have peptidyltransferase activity K02886 GO:0002181,GO:0003674,GO:0003676,GO:0003723,GO:0003735,GO:0005198,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0006412,GO:0006518,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0015934,GO:0019538,GO:0022625,GO:0022626,GO:0032991,GO:0034641,GO:0034645,GO:0043043,GO:0043170,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:0071704,GO:0097159,GO:1901363,GO:1901564,GO:1901566,GO:1901576,GO:1990904 - 0.00000000000000000000000000000000000000000000000001131 183.0
DYD1_k127_6026758_0 Catalyzes the removal of elemental sulfur and selenium atoms from L-cysteine, L-cystine, L-selenocysteine, and L- selenocystine to produce L-alanine - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006533 454.0
DYD1_k127_6026758_1 Peptidase family M28 - - - 0.00000000000000000000000000000000000000000000002405 179.0
DYD1_k127_6028179_0 Acts as a processive, ATP-dependent zinc metallopeptidase for both cytoplasmic and membrane proteins. Plays a role in the quality control of integral membrane proteins K03798 GO:0003674,GO:0003824,GO:0004176,GO:0005575,GO:0005623,GO:0005886,GO:0006508,GO:0006807,GO:0008150,GO:0008152,GO:0008233,GO:0008237,GO:0009056,GO:0009057,GO:0016020,GO:0016462,GO:0016787,GO:0016817,GO:0016818,GO:0016887,GO:0017111,GO:0019538,GO:0030163,GO:0042623,GO:0043170,GO:0044238,GO:0044464,GO:0070011,GO:0071704,GO:0071944,GO:0140096,GO:1901564,GO:1901565,GO:1901575 - 7.944e-234 741.0
DYD1_k127_6028179_1 Imidazolone-5-propionate hydrolase K01468 - 3.5.2.7 0.0000000000000000000000000000000000000000000000000000000000000000000000000001393 266.0
DYD1_k127_6028179_2 transferase activity, transferring acyl groups - - - 0.000000000000000000000000000000000000000000000000000001961 195.0
DYD1_k127_6034254_0 Part of the ABC transporter complex LolCDE involved in the translocation of mature outer membrane-directed lipoproteins, from the inner membrane to the periplasmic chaperone, LolA. Responsible for the formation of the LolA-lipoprotein complex in an ATP-dependent manner K02003,K09810 - - 0.0000000000000000000000000000000000000000000000000000000000002322 222.0
DYD1_k127_6034254_1 MacB-like periplasmic core domain - - - 0.00000001805 64.0
DYD1_k127_6034254_2 ASPIC and UnbV - - - 0.00000007519 66.0
DYD1_k127_6057070_0 Protein of unknown function, DUF547 - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005208 528.0
DYD1_k127_6057070_1 Mo-co oxidoreductase dimerisation domain K17225 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002051 516.0
DYD1_k127_6057070_2 PFAM FAD-dependent pyridine nucleotide-disulphide oxidoreductase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001098 370.0
DYD1_k127_6057070_3 Galactokinase K00849 GO:0000166,GO:0003674,GO:0003824,GO:0004335,GO:0005488,GO:0005524,GO:0005534,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005975,GO:0005996,GO:0006012,GO:0006059,GO:0006066,GO:0006082,GO:0006090,GO:0006091,GO:0006096,GO:0006139,GO:0006163,GO:0006164,GO:0006165,GO:0006725,GO:0006732,GO:0006733,GO:0006753,GO:0006754,GO:0006757,GO:0006793,GO:0006796,GO:0006807,GO:0008144,GO:0008150,GO:0008152,GO:0009056,GO:0009058,GO:0009108,GO:0009117,GO:0009123,GO:0009124,GO:0009126,GO:0009127,GO:0009132,GO:0009135,GO:0009141,GO:0009142,GO:0009144,GO:0009145,GO:0009150,GO:0009152,GO:0009156,GO:0009161,GO:0009165,GO:0009166,GO:0009167,GO:0009168,GO:0009179,GO:0009185,GO:0009199,GO:0009201,GO:0009205,GO:0009206,GO:0009259,GO:0009260,GO:0009987,GO:0016052,GO:0016053,GO:0016301,GO:0016310,GO:0016740,GO:0016772,GO:0016773,GO:0017076,GO:0017144,GO:0018130,GO:0019200,GO:0019318,GO:0019320,GO:0019359,GO:0019362,GO:0019363,GO:0019388,GO:0019400,GO:0019402,GO:0019438,GO:0019439,GO:0019637,GO:0019693,GO:0019751,GO:0019752,GO:0030246,GO:0030554,GO:0032553,GO:0032555,GO:0032559,GO:0032787,GO:0033499,GO:0034404,GO:0034641,GO:0034654,GO:0034655,GO:0035639,GO:0036094,GO:0042866,GO:0043167,GO:0043168,GO:0043436,GO:0044237,GO:0044238,GO:0044248,GO:0044249,GO:0044262,GO:0044270,GO:0044271,GO:0044281,GO:0044282,GO:0044283,GO:0044424,GO:0044444,GO:0044464,GO:0046031,GO:0046034,GO:0046365,GO:0046390,GO:0046394,GO:0046434,GO:0046483,GO:0046496,GO:0046700,GO:0046835,GO:0046939,GO:0048029,GO:0051186,GO:0051188,GO:0055086,GO:0061615,GO:0061620,GO:0061622,GO:0061623,GO:0071704,GO:0072330,GO:0072521,GO:0072522,GO:0072524,GO:0072525,GO:0090407,GO:0097159,GO:0097367,GO:1901135,GO:1901137,GO:1901265,GO:1901292,GO:1901293,GO:1901360,GO:1901361,GO:1901362,GO:1901363,GO:1901564,GO:1901566,GO:1901575,GO:1901576,GO:1901615 2.7.1.6 0.00000000000000000000000000000000000000000000005073 175.0
DYD1_k127_6062130_0 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain K00015 GO:0003674,GO:0003824,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0008150,GO:0008152,GO:0016491,GO:0016614,GO:0016616,GO:0016618,GO:0030267,GO:0044424,GO:0044444,GO:0044464,GO:0055114 1.1.1.26 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000007032 305.0
DYD1_k127_6062130_1 Amidohydrolase family - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000004785 278.0
DYD1_k127_6062130_2 Catalyzes the condensation of 2 ATP molecules into cyclic di-AMP (c-di-AMP), a second messenger used to regulate differing processes in different bacteria K18672 - 2.7.7.85 0.000000000000000000000000000000000000000000000000000000000000000001305 236.0
DYD1_k127_6062130_3 PFAM glycoside hydrolase, family 10 - - - 0.000000000000000000000000000000000000006316 163.0
DYD1_k127_6062130_4 6-O-methylguanine DNA methyltransferase, DNA binding domain K07443 - - 0.000000000000000000001231 100.0
DYD1_k127_6062130_5 Amidohydrolase family - - - 0.000000000267 62.0
DYD1_k127_6067575_0 extracellular matrix structural constituent - - - 0.00000000000000000000008765 116.0
DYD1_k127_6070976_0 tyrosine recombinase XerC K04763 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000001741 272.0
DYD1_k127_6070976_1 His Kinase A (phosphoacceptor) domain - - - 0.00000000000000000000000000000000000000000000000000000000000000005014 248.0
DYD1_k127_6070976_2 COG1028 Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) - - - 0.000000000000000000000000000000000000000000000000002484 191.0
DYD1_k127_6070976_3 SMART Heat shock protein DnaJ K05516 - - 0.00000000000000000000000000000000000000000000009577 178.0
DYD1_k127_6070976_4 Transcriptional regulatory protein, C terminal - - - 0.000000000000003283 78.0
DYD1_k127_6103918_0 prohibitin homologues - - - 0.0000000000000000000000000000000000000000000001758 177.0
DYD1_k127_6103918_1 COG2206 HD-GYP domain - - - 0.0000000000000000000000000000007241 138.0
DYD1_k127_6103918_2 COG0330 Membrane protease subunits stomatin prohibitin homologs - - - 0.0000000000000000000002074 109.0
DYD1_k127_6106570_0 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III - - - 0.000000000000000000000000000000000000003304 157.0
DYD1_k127_6106570_1 Converts alpha-N-acetylneuranimic acid (Neu5Ac) to the beta-anomer, accelerating the equilibrium between the alpha- and beta-anomers. Probably facilitates sialidase-negative bacteria to compete sucessfully for limited amounts of extracellular Neu5Ac, which is likely taken up in the beta-anomer. In addition, the rapid removal of sialic acid from solution might be advantageous to the bacterium to damp down host responses K01179 - 3.2.1.4 0.0000001339 60.0
DYD1_k127_6127792_0 PFAM Tetratricopeptide repeat - - - 0.00000000000000000000000000000000000000007244 162.0
DYD1_k127_6127792_1 Belongs to the peptidase S8 family - - - 0.00000000000000000000002607 101.0
DYD1_k127_6127792_2 Belongs to the peptidase S8 family - - - 0.000000004353 59.0
DYD1_k127_6127792_3 domain, Protein K11904,K12132 - 2.7.11.1 0.00003576 52.0
DYD1_k127_6127856_0 D-isomer specific 2-hydroxyacid dehydrogenase catalytic K00058 - 1.1.1.399,1.1.1.95 0.000000000000000000000000000000000000000000000000000000000002543 220.0
DYD1_k127_6127856_1 Protein of unknown function DUF111 K09121 - 4.99.1.12 0.000000000000000000000000000000001949 133.0
DYD1_k127_6127856_2 - - - - 0.0000000000000005279 89.0
DYD1_k127_6127856_3 acid phosphatase activity - - - 0.000007256 59.0
DYD1_k127_6129259_0 glutamate--cysteine ligase - - - 9.502e-217 691.0
DYD1_k127_6129259_1 PHP domain protein - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002153 473.0
DYD1_k127_6129259_10 Catalyzes the formation of dTDP-glucose, from dTTP and glucose 1-phosphate, as well as its pyrophosphorolysis K00973 - 2.7.7.24 0.000000000000000000000000000000000000000000008192 164.0
DYD1_k127_6129259_11 Belongs to the universal ribosomal protein uS9 family K02996 GO:0000462,GO:0003674,GO:0003676,GO:0003723,GO:0003735,GO:0005198,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0006139,GO:0006364,GO:0006396,GO:0006412,GO:0006518,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0015935,GO:0016070,GO:0016072,GO:0019538,GO:0022613,GO:0022626,GO:0022627,GO:0030490,GO:0032991,GO:0034470,GO:0034641,GO:0034645,GO:0034660,GO:0042254,GO:0042274,GO:0043043,GO:0043170,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043603,GO:0043604,GO:0044085,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:0046483,GO:0071704,GO:0071840,GO:0090304,GO:0097159,GO:1901360,GO:1901363,GO:1901564,GO:1901566,GO:1901576,GO:1990904 - 0.0000000000000000000000000000000000000885 148.0
DYD1_k127_6129259_12 ACT domain protein - - - 0.0000000000000000000000000001886 119.0
DYD1_k127_6129259_13 Histidine kinase K05962 - 2.7.13.1 0.0000000000000000002056 93.0
DYD1_k127_6129259_14 - - - - 0.0000000000000005081 83.0
DYD1_k127_6129259_15 - - - - 0.00000002291 60.0
DYD1_k127_6129259_2 Ecdysteroid kinase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004853 454.0
DYD1_k127_6129259_3 PFAM RimK domain protein ATP-grasp K05844 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006677 353.0
DYD1_k127_6129259_4 HPr kinase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000002843 293.0
DYD1_k127_6129259_5 succinylglutamate desuccinylase activity K05526 - 3.5.1.96 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000004015 287.0
DYD1_k127_6129259_6 Involved in base excision repair of DNA damaged by oxidation or by mutagenic agents. Acts as DNA glycosylase that recognizes and removes damaged bases. Has a preference for oxidized purines, such as 7,8-dihydro-8-oxoguanine (8-oxoG). Has AP (apurinic apyrimidinic) lyase activity and introduces nicks in the DNA strand. Cleaves the DNA backbone by beta-delta elimination to generate a single-strand break at the site of the removed base with both 3'- and 5'-phosphates K10563 - 3.2.2.23,4.2.99.18 0.00000000000000000000000000000000000000000000000000000000008643 214.0
DYD1_k127_6129259_7 This protein is one of the early assembly proteins of the 50S ribosomal subunit, although it is not seen to bind rRNA by itself. It is important during the early stages of 50S assembly K02871 GO:0003674,GO:0003676,GO:0003723,GO:0003729,GO:0003735,GO:0005198,GO:0005488,GO:0005575,GO:0005618,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0005886,GO:0006412,GO:0006417,GO:0006518,GO:0006807,GO:0008150,GO:0008152,GO:0008270,GO:0009058,GO:0009059,GO:0009889,GO:0009890,GO:0009892,GO:0009987,GO:0010467,GO:0010468,GO:0010556,GO:0010558,GO:0010605,GO:0010608,GO:0010629,GO:0015934,GO:0016020,GO:0017148,GO:0019222,GO:0019538,GO:0019843,GO:0022625,GO:0022626,GO:0030312,GO:0031323,GO:0031324,GO:0031326,GO:0031327,GO:0032268,GO:0032269,GO:0032991,GO:0034248,GO:0034249,GO:0034641,GO:0034645,GO:0040007,GO:0043043,GO:0043167,GO:0043169,GO:0043170,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:0046872,GO:0046914,GO:0048519,GO:0048523,GO:0050789,GO:0050794,GO:0051171,GO:0051172,GO:0051246,GO:0051248,GO:0060255,GO:0065007,GO:0070180,GO:0071704,GO:0071944,GO:0080090,GO:0097159,GO:1901363,GO:1901564,GO:1901566,GO:1901576,GO:1990904,GO:2000112,GO:2000113 - 0.000000000000000000000000000000000000000000000000001627 186.0
DYD1_k127_6129259_8 Haem-NO-binding - - - 0.0000000000000000000000000000000000000000000000002319 182.0
DYD1_k127_6129259_9 translation initiation inhibitor, yjgF family K04782 - 4.2.99.21 0.0000000000000000000000000000000000000000000009403 170.0
DYD1_k127_6139037_0 Prolyl oligopeptidase, N-terminal beta-propeller domain K01322 - 3.4.21.26 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001504 522.0
DYD1_k127_6139037_1 PFAM Prolyl oligopeptidase, N-terminal beta-propeller domain K01322 - 3.4.21.26 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003835 475.0
DYD1_k127_6139037_2 Protein of unknown function (DUF1501) - - - 0.00000000000000000000000000000000000000000000000000000000000000002201 233.0
DYD1_k127_6139037_3 - - - - 0.0000000000000004544 86.0
DYD1_k127_6141747_0 Putative restriction endonuclease - - - 0.00000000000000000000000000000000000000000000000001752 186.0
DYD1_k127_6141747_1 COG0491 Zn-dependent hydrolases, including glyoxylases K01069 - 3.1.2.6 0.000000000000000000000000000000000000004576 154.0
DYD1_k127_6141747_2 Pyrrolo-quinoline quinone - - - 0.00000001287 69.0
DYD1_k127_6141747_3 PQQ enzyme repeat - - - 0.0001487 56.0
DYD1_k127_6160967_0 translation initiation inhibitor yjgF family - - - 0.00000000000000000000000000000000000000000005329 167.0
DYD1_k127_6160967_1 PFAM PHA accumulation regulator DNA-binding protein - - - 0.000000000000000001546 94.0
DYD1_k127_6195916_0 Belongs to the cytidylate kinase family. Type 1 subfamily K00945 - 2.7.4.25 0.0000000000000000000000000000000000000000000000000009159 191.0
DYD1_k127_6195916_1 Belongs to the 1-acyl-sn-glycerol-3-phosphate acyltransferase family K00655 - 2.3.1.51 0.000000000000000000000000000000000001824 148.0
DYD1_k127_6202763_0 COG1595 DNA-directed RNA polymerase specialized sigma subunit sigma24 homolog - - - 0.0000000000000000000000000005448 120.0
DYD1_k127_6202763_1 Metallo-peptidase family M12B Reprolysin-like - - - 0.0000000000000001363 95.0
DYD1_k127_623089_0 Right handed beta helix region - - - 0.0000000000000000000000000000000000000000000000000000000000000000006011 260.0
DYD1_k127_623089_1 Right handed beta helix region - - - 0.00000000000000000000000000000000000000000000000003948 192.0
DYD1_k127_623089_2 Bacterial pre-peptidase C-terminal domain - - - 0.0000000000000004506 94.0
DYD1_k127_623089_3 Peptidyl-prolyl cis-trans isomerase - - - 0.0000001065 66.0
DYD1_k127_6241037_0 Cytochrome b(N-terminal)/b6/petB K00410,K00412,K02635,K02637 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000001802 273.0
DYD1_k127_6241037_1 NapC/NirT cytochrome c family, N-terminal region - - - 0.00000000000000000000000000000000000000000000000000000000000007583 236.0
DYD1_k127_6241037_10 formate dehydrogenase - - - 0.000000005607 68.0
DYD1_k127_6241037_12 NHL repeat - - - 0.00003972 53.0
DYD1_k127_6241037_2 denitrification pathway - - - 0.00000000000000000000000000000000000000000000000001254 202.0
DYD1_k127_6241037_3 Catalyzes the reduction of nitrite to ammonia, consuming six electrons in the process K03385 - 1.7.2.2 0.000000000000000000000000000000000000000000000001694 190.0
DYD1_k127_6241037_4 Cytochrome c554 and c-prime K03620 - - 0.00000000000000000000000000000000000008263 163.0
DYD1_k127_6241037_5 anaerobic respiration - - - 0.00000000000000000000000000009832 134.0
DYD1_k127_6241037_6 PA14 - - - 0.00000000000000000000000002657 126.0
DYD1_k127_6241037_7 Catalyzes the reduction of nitrite to ammonia, consuming six electrons in the process K03385 - 1.7.2.2 0.0000000000000000000000118 115.0
DYD1_k127_6241037_8 PFAM Rieske 2Fe-2S domain protein K02636 - 1.10.9.1 0.0000000000000000000003079 113.0
DYD1_k127_624186_0 PFAM Protein kinase domain K12132 - 2.7.11.1 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000568 375.0
DYD1_k127_624186_1 Major Facilitator Superfamily K02445 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008235 352.0
DYD1_k127_624186_2 Mandelate racemase muconate lactonizing enzyme K01856,K19802 - 5.1.1.20,5.5.1.1 0.0000000000000000000000000000000000000000000000000000000000004459 226.0
DYD1_k127_624186_3 Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released K02405 - - 0.00000000000000000000000000000000000000000000000008807 186.0
DYD1_k127_624186_4 competence protein ComEC Rec2 K02238 - - 0.000000000000000000000000000005395 131.0
DYD1_k127_624186_5 Collagen triple helix repeat (20 copies) - - - 0.000000000000000000565 99.0
DYD1_k127_6263377_0 Necessary for efficient RNA polymerase transcription elongation past template-encoded arresting sites. The arresting sites in DNA have the property of trapping a certain fraction of elongating RNA polymerases that pass through, resulting in locked ternary complexes. Cleavage of the nascent transcript by cleavage factors such as GreA or GreB allows the resumption of elongation from the new 3'terminus. GreA releases sequences of 2 to 3 nucleotides K03624 - - 0.000000000000007396 86.0
DYD1_k127_626367_0 Histidine kinase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000484 276.0
DYD1_k127_626367_1 Xanthine and CO dehydrogenases maturation factor, XdhC CoxF family K07402 - - 0.000000000000000000000000000000000000002204 153.0
DYD1_k127_626367_2 lipolytic protein G-D-S-L family - - - 0.0000000000000000000000000001561 128.0
DYD1_k127_626367_3 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase K07141,K19190 GO:0000287,GO:0003674,GO:0003824,GO:0005488,GO:0006139,GO:0006725,GO:0006732,GO:0006753,GO:0006777,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009108,GO:0009117,GO:0009165,GO:0009987,GO:0016740,GO:0016772,GO:0016779,GO:0018130,GO:0019438,GO:0019538,GO:0019637,GO:0019720,GO:0034641,GO:0034654,GO:0043167,GO:0043169,GO:0043170,GO:0043545,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044281,GO:0046483,GO:0046872,GO:0051186,GO:0051188,GO:0051189,GO:0055086,GO:0061602,GO:0070567,GO:0071704,GO:0090407,GO:1901293,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576,GO:1902759,GO:1902760 1.1.1.328,2.7.7.76 0.00000000000000000000000001289 118.0
DYD1_k127_6277278_0 helix_turn_helix, Lux Regulon K07684 - - 0.00000000000000000002505 92.0
DYD1_k127_6299338_0 Right handed beta helix region K21449 - - 0.000000000000000000000000000000001171 151.0
DYD1_k127_6332008_0 PFAM Glycosyl transferase family 2 - - - 0.00000000000000000000000000000000000000000000000001874 188.0
DYD1_k127_6332008_1 Psort location CytoplasmicMembrane, score - - - 0.000000000000000000000002046 120.0
DYD1_k127_6351267_0 IF-3 binds to the 30S ribosomal subunit and shifts the equilibrum between 70S ribosomes and their 50S and 30S subunits in favor of the free subunits, thus enhancing the availability of 30S subunits on which protein synthesis initiation begins K02520 GO:0003674,GO:0003676,GO:0003723,GO:0003743,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006412,GO:0006413,GO:0006518,GO:0006807,GO:0006996,GO:0008135,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0016020,GO:0016043,GO:0019538,GO:0022411,GO:0032790,GO:0032984,GO:0032988,GO:0034641,GO:0034645,GO:0043021,GO:0043022,GO:0043043,GO:0043170,GO:0043603,GO:0043604,GO:0043933,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044424,GO:0044444,GO:0044464,GO:0044877,GO:0071704,GO:0071826,GO:0071840,GO:0097159,GO:1901363,GO:1901564,GO:1901566,GO:1901576,GO:1903008 - 0.000000000000000000000000000000000000000000000000000006192 196.0
DYD1_k127_6351267_1 Binds directly to 23S ribosomal RNA and is necessary for the in vitro assembly process of the 50S ribosomal subunit. It is not involved in the protein synthesizing functions of that subunit K02887 - - 0.00000000000000000000000000000000000001148 147.0
DYD1_k127_6351267_2 Belongs to the bacterial ribosomal protein bL35 family K02916 GO:0003674,GO:0003735,GO:0005198,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0015934,GO:0022625,GO:0022626,GO:0032991,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:1990904 - 0.0000000002624 66.0
DYD1_k127_6351267_3 valine--tRNA ligase K01873 GO:0000003,GO:0003006,GO:0003674,GO:0003824,GO:0004812,GO:0004832,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006082,GO:0006139,GO:0006399,GO:0006412,GO:0006418,GO:0006438,GO:0006518,GO:0006520,GO:0006725,GO:0006807,GO:0007275,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009507,GO:0009532,GO:0009536,GO:0009570,GO:0009790,GO:0009791,GO:0009793,GO:0009987,GO:0010154,GO:0010467,GO:0016070,GO:0016874,GO:0016875,GO:0019538,GO:0019752,GO:0022414,GO:0032501,GO:0032502,GO:0034641,GO:0034645,GO:0034660,GO:0043038,GO:0043039,GO:0043043,GO:0043170,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0043436,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044281,GO:0044422,GO:0044424,GO:0044434,GO:0044435,GO:0044444,GO:0044446,GO:0044464,GO:0046483,GO:0048316,GO:0048608,GO:0048731,GO:0048856,GO:0061458,GO:0071704,GO:0090304,GO:0140098,GO:0140101,GO:1901360,GO:1901564,GO:1901566,GO:1901576 6.1.1.9 0.00001451 55.0
DYD1_k127_6374892_0 Sodium:neurotransmitter symporter family - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000163 604.0
DYD1_k127_6374892_1 lipolytic protein G-D-S-L family - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000675 369.0
DYD1_k127_6374892_2 Catalyzes a reversible aldol reaction between acetaldehyde and D-glyceraldehyde 3-phosphate to generate 2-deoxy- D-ribose 5-phosphate K01619,K01840 GO:0003674,GO:0003824,GO:0004139,GO:0005975,GO:0006139,GO:0006725,GO:0006753,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0009056,GO:0009058,GO:0009117,GO:0009166,GO:0009262,GO:0009264,GO:0009987,GO:0016052,GO:0016829,GO:0016830,GO:0016832,GO:0018130,GO:0019438,GO:0019439,GO:0019637,GO:0034404,GO:0034641,GO:0034654,GO:0034655,GO:0044237,GO:0044238,GO:0044248,GO:0044249,GO:0044270,GO:0044271,GO:0044281,GO:0044283,GO:0046434,GO:0046483,GO:0046700,GO:0055086,GO:0071704,GO:1901135,GO:1901136,GO:1901292,GO:1901360,GO:1901361,GO:1901362,GO:1901575,GO:1901576 4.1.2.4,5.4.2.8 0.00000000000000000000000000000000000000000000000000000000000000000000000009716 267.0
DYD1_k127_6374892_3 galactose-6-phosphate isomerase activity K00761,K01808 - 2.4.2.9,5.3.1.6 0.0000000000000000000000000000000000000000322 170.0
DYD1_k127_6374892_4 Trypsin - - - 0.000000000000000000000000002241 122.0
DYD1_k127_6374892_5 - - - - 0.000000000000000000000006194 115.0
DYD1_k127_6374892_6 MOSC domain - - - 0.000000000000000000000006711 109.0
DYD1_k127_6374892_8 Flagellin is the subunit protein which polymerizes to form the filaments of bacterial flagella K02406 GO:0005575,GO:0005576,GO:0005623,GO:0009288,GO:0042995,GO:0043226,GO:0043228,GO:0044464 - 0.000007923 49.0
DYD1_k127_6414146_0 transferase activity, transferring glycosyl groups - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000316 369.0
DYD1_k127_6414146_1 peptidyl-tyrosine sulfation - - - 0.00000000000000000000000000000000000000000000000000000000000003729 235.0
DYD1_k127_6414146_2 Beta-lactamase superfamily domain - - - 0.00000000000000000000000000000000000000000000000000000000002229 215.0
DYD1_k127_6437187_0 This protein binds to 23S rRNA in the presence of protein L20 K02888 - - 0.00000000000000000000002641 103.0
DYD1_k127_6437187_1 - - - - 0.000000002193 69.0
DYD1_k127_6437429_0 von Willebrand factor, type A - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001153 454.0
DYD1_k127_6437429_1 RING finger protein - - - 0.000000000000000000000000001536 120.0
DYD1_k127_6438242_0 NHL repeat - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000005878 266.0
DYD1_k127_6438242_1 Glucose / Sorbosone dehydrogenase - - - 0.00000000000000000000000000000000000000000000000000000000000000000006671 241.0
DYD1_k127_6438242_2 Cytochrome c - - - 0.000000000001691 76.0
DYD1_k127_6438242_3 cellulose binding - - - 0.0000105 52.0
DYD1_k127_6441101_0 One of several proteins that assist in the late maturation steps of the functional core of the 30S ribosomal subunit. Helps release RbfA from mature subunits. May play a role in the assembly of ribosomal proteins into the subunit. Circularly permuted GTPase that catalyzes slow GTP hydrolysis, GTPase activity is stimulated by the 30S ribosomal subunit K06949 - 3.1.3.100 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000003427 289.0
DYD1_k127_6444927_0 Sigma-70 region 2 K03088 - - 0.000000000000000000000000000000000000000000000000007249 193.0
DYD1_k127_646055_0 Vault protein inter-alpha-trypsin domain K07114 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000003416 288.0
DYD1_k127_646055_1 Belongs to the SOS response-associated peptidase family - - - 0.000000000000000000000000000000000000000000000000000000000000321 219.0
DYD1_k127_6487744_0 DNA methylase K00590 - 2.1.1.113 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002173 322.0
DYD1_k127_6487744_1 Belongs to the class-I pyridine nucleotide-disulfide oxidoreductase family - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001817 301.0
DYD1_k127_6487744_2 PFAM Glycosyl transferase family 2 - - - 0.00000000000000000000000000000000000000000000000000000000000000002658 235.0
DYD1_k127_6487744_3 Ammonium Transporter Family K03320 - - 0.0000000000004063 70.0
DYD1_k127_6487744_4 repeat-containing protein - - - 0.00002409 54.0
DYD1_k127_6500261_0 PFAM ABC transporter K09691 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000006319 283.0
DYD1_k127_6500261_1 - - - - 0.0000000000000000000000000000000000000001517 158.0
DYD1_k127_6500261_2 polysaccharide deacetylase - - - 0.00000000000000000000000000000000344 145.0
DYD1_k127_6506524_0 Involved in cell wall K00721 - 2.4.1.83 0.000000000000000000000000000000000000000000000000000000000000000000000000706 253.0
DYD1_k127_6506524_1 Haloacid dehalogenase-like hydrolase - - - 0.000000000000000000000000000000000000000000000000000000000000002666 228.0
DYD1_k127_6506524_2 alcohol dehydrogenase - - - 0.00000000000000000000000004191 115.0
DYD1_k127_6506524_3 - - - - 0.000000000000000002433 98.0
DYD1_k127_6514229_0 Catalyzes the conversion of acetate into acetyl-CoA (AcCoA), an essential intermediate at the junction of anabolic and catabolic pathways. AcsA undergoes a two-step reaction. In the first half reaction, AcsA combines acetate with ATP to form acetyl-adenylate (AcAMP) intermediate. In the second half reaction, it can then transfer the acetyl group from AcAMP to the sulfhydryl group of CoA, forming the product AcCoA K01895 - 6.2.1.1 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003706 580.0
DYD1_k127_6514229_1 PFAM Phosphoglucomutase phosphomannomutase, alpha beta alpha domain K01840 - 5.4.2.8 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001792 330.0
DYD1_k127_6514229_2 Belongs to the NiCoT transporter (TC 2.A.52) family - - - 0.0000000000000000000000007286 109.0
DYD1_k127_6514229_3 Histidine kinase K02484 - 2.7.13.3 0.00000000000000000000009959 110.0
DYD1_k127_6514229_4 Belongs to the NiCoT transporter (TC 2.A.52) family K07241 - - 0.0000000000000124 77.0
DYD1_k127_6525540_0 TIGRFAM succinate dehydrogenase and fumarate reductase iron-sulfur protein K00240 - 1.3.5.1,1.3.5.4 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009152 352.0
DYD1_k127_6525540_1 - - - - 0.000009877 54.0
DYD1_k127_652827_0 - - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009115 382.0
DYD1_k127_652827_1 - - - - 0.000000000000000000000000000007463 126.0
DYD1_k127_6544832_0 PrkA serine protein kinase C-terminal domain K07180 - - 2.465e-311 967.0
DYD1_k127_6544832_1 Domain in cystathionine beta-synthase and other proteins. - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001429 375.0
DYD1_k127_6544832_2 helix_turn_helix, Lux Regulon - - - 0.000000000000000000000000000000000000000000001769 172.0
DYD1_k127_6544832_3 hydrolase activity, hydrolyzing O-glycosyl compounds K01176 - 3.2.1.1 0.0000000000000000000000000000009316 134.0
DYD1_k127_6544832_4 amino acid activation for nonribosomal peptide biosynthetic process K06045 - 4.2.1.129,5.4.99.17 0.0000005599 60.0
DYD1_k127_6558496_0 von Willebrand factor (vWF) type A domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000001148 285.0
DYD1_k127_6558496_1 Aerotolerance regulator N-terminal - - - 0.000001334 57.0
DYD1_k127_6572381_0 Seven times multi-haem cytochrome CxxCH - - - 4.459e-207 657.0
DYD1_k127_6572381_1 methyltransferase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000002498 290.0
DYD1_k127_6572381_2 Cytochrome b(N-terminal)/b6/petB K00412,K02635,K02637,K03887,K03891,K15879 GO:0005575,GO:0005622,GO:0005623,GO:0005886,GO:0005887,GO:0008150,GO:0009512,GO:0009579,GO:0016020,GO:0016021,GO:0031224,GO:0031226,GO:0032991,GO:0040007,GO:0044424,GO:0044425,GO:0044436,GO:0044459,GO:0044464,GO:0070069,GO:0071944 - 0.000000000000000000000000000000000000000000000000000000000000000000004343 253.0
DYD1_k127_6572381_3 PFAM Cupin 2 conserved barrel domain protein - - - 0.00000000000000000000000000001147 121.0
DYD1_k127_6572381_4 CBS domain K04767 - - 0.00000000000000000001144 102.0
DYD1_k127_6572381_5 Rieske [2Fe-2S] domain K03886 - - 0.000000000000000226 87.0
DYD1_k127_6572381_6 Domain in cystathionine beta-synthase and other proteins. - - - 0.000000008824 66.0
DYD1_k127_6572381_7 Alginate export - - - 0.000000008847 63.0
DYD1_k127_6573159_0 Belongs to the succinate dehydrogenase fumarate reductase iron-sulfur protein family K00207,K12527,K17723 - 1.3.1.1,1.3.1.2,1.97.1.9 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002451 415.0
DYD1_k127_6573159_1 Thioredoxin-like - - - 0.0000000000000000000000000000000000000000000003095 179.0
DYD1_k127_6573159_2 Catalyzes the phosphorylation of pantothenate (Pan), the first step in CoA biosynthesis K03525 - 2.7.1.33 0.00000000000000000000000000000000000007277 152.0
DYD1_k127_6573159_3 Exhibits a very high intrinsic GTPase hydrolysis rate. Involved in the addition of a carboxymethylaminomethyl (cmnm) group at the wobble position (U34) of certain tRNAs, forming tRNA- cmnm(5)s(2)U34 K03650 - - 0.0000000000000000000000000000000000002133 154.0
DYD1_k127_6591980_0 cellulase activity K01179,K13735,K21449 - 3.2.1.4 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001224 611.0
DYD1_k127_6591980_1 - - - - 0.0000000000000000000000000000000000000000000000000001009 197.0
DYD1_k127_6595418_0 transporter of a GTP-driven Fe(2 ) uptake system K04759 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000001861 282.0
DYD1_k127_6595418_1 Ankyrin repeat domain 28 K15502 - - 0.00000000000000000000000003195 120.0
DYD1_k127_6595418_2 Iron (Metal) dependent repressor, DtxR family K03709 - - 0.0000000000000006124 79.0
DYD1_k127_6640403_0 NHL repeat - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000371 293.0
DYD1_k127_6640403_1 Belongs to the UPF0234 family K09767 - - 0.0000000000000000000000000004437 115.0
DYD1_k127_6649972_0 Belongs to the peptidase S8 family K01280 - 3.4.14.10 0.0000000000000000000000000000000000000000000000000002001 206.0
DYD1_k127_6649972_1 May conjugate Arg from its aminoacyl-tRNA to the N- termini of proteins containing an N-terminal aspartate or glutamate K21420 - 2.3.2.29 0.0000000000000000000000000000000000000000000000001398 191.0
DYD1_k127_6649972_2 Thioredoxin-like - - - 0.00000000000000000001279 105.0
DYD1_k127_6649972_3 Chase2 domain - - - 0.0000000002925 74.0
DYD1_k127_6649972_4 Adenylate guanylate cyclase catalytic domain protein K01768 - 4.6.1.1 0.000008224 59.0
DYD1_k127_6662010_0 Type I phosphodiesterase / nucleotide pyrophosphatase - - - 0.000000000000000000000000000000000000000000000000000000000000000000008599 255.0
DYD1_k127_6662010_2 ABC transporter, ATP-binding protein K02003 - - 0.00000000000000000000000000005184 117.0
DYD1_k127_6662010_3 - - - - 0.0000000000000000000005815 113.0
DYD1_k127_6662010_4 Required for disulfide bond formation in some periplasmic proteins. Acts by transferring its disulfide bond to other proteins and is reduced in the process - - - 0.00000000000000000000496 107.0
DYD1_k127_6662010_5 Hydantoinase/oxoprolinase N-terminal region K01469 - 3.5.2.9 0.0000001515 63.0
DYD1_k127_6666877_0 that it carries out the mismatch recognition step. This protein has a weak ATPase activity K03555 GO:0003674,GO:0003676,GO:0003677,GO:0003684,GO:0003690,GO:0003824,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0006139,GO:0006259,GO:0006281,GO:0006298,GO:0006725,GO:0006807,GO:0006950,GO:0006974,GO:0008094,GO:0008150,GO:0008152,GO:0009987,GO:0016462,GO:0016787,GO:0016817,GO:0016818,GO:0016887,GO:0017111,GO:0030983,GO:0032300,GO:0032991,GO:0033554,GO:0034641,GO:0042623,GO:0043170,GO:0044237,GO:0044238,GO:0044260,GO:0044424,GO:0044464,GO:0046483,GO:0050896,GO:0051716,GO:0071704,GO:0090304,GO:0097159,GO:1901360,GO:1901363,GO:1990391 - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000001213 276.0
DYD1_k127_6666877_1 Serine aminopeptidase, S33 - - - 0.000004496 57.0
DYD1_k127_6673173_0 COG1541 Coenzyme F390 synthetase K01912 - 6.2.1.30 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002573 412.0
DYD1_k127_6673173_1 protein kinase related protein - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000824 293.0
DYD1_k127_6687270_0 Acts as a processive, ATP-dependent zinc metallopeptidase for both cytoplasmic and membrane proteins. Plays a role in the quality control of integral membrane proteins K03798 - - 1.084e-251 783.0
DYD1_k127_6687270_1 Catalyzes the conversion of glucosamine-6-phosphate to glucosamine-1-phosphate K03431 - 5.4.2.10 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001461 443.0
DYD1_k127_6687270_2 Catalyzes the condensation of para-aminobenzoate (pABA) with 6-hydroxymethyl-7,8-dihydropterin diphosphate (DHPt-PP) to form 7,8-dihydropteroate (H2Pte), the immediate precursor of folate derivatives K00796 - 2.5.1.15 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006878 307.0
DYD1_k127_6695573_0 DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates K03046 GO:0000428,GO:0005575,GO:0005622,GO:0005623,GO:0030880,GO:0032991,GO:0044424,GO:0044464,GO:0061695,GO:1902494,GO:1990234 2.7.7.6 0.0 1047.0
DYD1_k127_6695573_1 One of the primary rRNA binding proteins, it binds directly to 16S rRNA where it nucleates assembly of the head domain of the 30S subunit. Is located at the subunit interface close to the decoding center, probably blocks exit of the E-site tRNA K02992 GO:0000028,GO:0003674,GO:0003676,GO:0003723,GO:0003729,GO:0003735,GO:0005198,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0006412,GO:0006518,GO:0006807,GO:0006996,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0015935,GO:0016043,GO:0019538,GO:0019843,GO:0022607,GO:0022613,GO:0022618,GO:0022626,GO:0022627,GO:0032991,GO:0034622,GO:0034641,GO:0034645,GO:0042254,GO:0042255,GO:0042274,GO:0043043,GO:0043170,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043603,GO:0043604,GO:0043933,GO:0044085,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:0065003,GO:0070925,GO:0071704,GO:0071826,GO:0071840,GO:0097159,GO:1901363,GO:1901564,GO:1901566,GO:1901576,GO:1990904 - 0.00000000000000000000000000000000000000000000000000000000003304 209.0
DYD1_k127_6695573_2 Interacts with and stabilizes bases of the 16S rRNA that are involved in tRNA selection in the A site and with the mRNA backbone. Located at the interface of the 30S and 50S subunits, it traverses the body of the 30S subunit contacting proteins on the other side and probably holding the rRNA structure together. The combined cluster of proteins S8, S12 and S17 appears to hold together the shoulder and platform of the 30S subunit K02950 GO:0003674,GO:0003735,GO:0005198,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005840,GO:0006412,GO:0006518,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0019538,GO:0032991,GO:0034641,GO:0034645,GO:0043043,GO:0043170,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044424,GO:0044444,GO:0044464,GO:0071704,GO:1901564,GO:1901566,GO:1901576,GO:1990904 - 0.000000000000000000000000000000000000000000000000000853 185.0
DYD1_k127_6705863_0 SAICAR synthetase K01923 - 6.3.2.6 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000398 344.0
DYD1_k127_6705863_1 Tetratricopeptide repeat - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000001151 261.0
DYD1_k127_6705863_2 regulation of translation K03530 - - 0.00000000000000000000000000008733 119.0
DYD1_k127_6705863_3 RNA polymerase-binding protein DksA K06204 - - 0.000000000001452 76.0
DYD1_k127_6707286_0 sulfate adenylyltransferase K00958 - 2.7.7.4 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005427 308.0
DYD1_k127_6707286_1 Catalyzes the conversion of 3-deoxy-D-arabino- heptulosonate 7-phosphate (DAHP) to dehydroquinate (DHQ) K01735,K13829 - 2.7.1.71,4.2.3.4 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000254 280.0
DYD1_k127_6707916_0 beta-propeller repeat - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002884 434.0
DYD1_k127_6707916_1 PFAM Peptidase M16 inactive domain K07263 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000002175 302.0
DYD1_k127_6707916_10 - - - - 0.00000000000000000000005095 103.0
DYD1_k127_6707916_2 COG0084 Mg-dependent DNase K03424 - - 0.00000000000000000000000000000000000000000000000000000000000000003777 231.0
DYD1_k127_6707916_3 transcriptional regulator sugar kinase K00845 - 2.7.1.2 0.0000000000000000000000000000000000000000000000000000000000000002457 232.0
DYD1_k127_6707916_4 polysaccharide deacetylase - - - 0.000000000000000000000000000000000000000000000000000000003257 212.0
DYD1_k127_6707916_5 response regulator receiver K02488 - 2.7.7.65 0.000000000000000000000000000000000000000006324 160.0
DYD1_k127_6707916_6 ErfK YbiS YcfS YnhG family protein - - - 0.000000000000000000000000000000000000003992 156.0
DYD1_k127_6707916_7 This protein is located at the 30S-50S ribosomal subunit interface and may play a role in the structure and function of the aminoacyl-tRNA binding site K02884 - - 0.00000000000000000000000000000000000006516 147.0
DYD1_k127_6707916_8 - K09931 - - 0.0000000000000000000000000000000004545 139.0
DYD1_k127_6707916_9 Belongs to the UPF0102 family K07460 - - 0.000000000000000000000001196 108.0
DYD1_k127_6755393_0 Na channel or pump K07150 - - 0.0000000000000000000000000000000000000000000002666 178.0
DYD1_k127_6755393_1 Protein of unknown function (DUF2752) - - - 0.00000000000000006011 88.0
DYD1_k127_6755393_2 - - - - 0.0000000000000007399 86.0
DYD1_k127_6755393_3 Glycosyltransferase Family 4 - - - 0.00000000000001396 87.0
DYD1_k127_6755393_4 Sigma-70 region 2 K03088 - - 0.000000004767 65.0
DYD1_k127_6762479_0 PFAM FAD linked oxidase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001145 345.0
DYD1_k127_6762479_1 DinB family - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000009535 249.0
DYD1_k127_6762479_2 Involved in the tonB-independent uptake of proteins - - - 0.0000000000000000000000000000000001142 140.0
DYD1_k127_6762479_3 SnoaL-like polyketide cyclase - - - 0.0000000000000000001237 97.0
DYD1_k127_6762479_4 Involved in the tonB-independent uptake of proteins K08884,K12132 - 2.7.11.1 0.00000000002191 70.0
DYD1_k127_676841_0 Zinc-binding dehydrogenase K00344 - 1.6.5.5 0.00000000000000000000000000000000000000000000000000000000000000000002127 240.0
DYD1_k127_676841_1 PFAM Mandelate racemase muconate lactonizing protein - - - 0.0000000000000000000000000000000000000000000000000000000000000003109 228.0
DYD1_k127_6782300_0 Vault protein inter-alpha-trypsin domain K07114 - - 0.0000000000000000000000000000000000000000000000000000000006424 214.0
DYD1_k127_6782300_1 Parallel beta-helix repeats - - - 0.000000000000000000000000000000000000000000000000000002509 202.0
DYD1_k127_678235_0 PFAM UvrB UvrC protein K08999 - - 0.0000000000000000000000000000000000000000000000000143 189.0
DYD1_k127_6784702_0 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster K17722 - 1.3.1.1 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003615 385.0
DYD1_k127_6784702_1 Part of the phosphoribosylformylglycinamidine synthase complex involved in the purines biosynthetic pathway. Catalyzes the ATP-dependent conversion of formylglycinamide ribonucleotide (FGAR) and glutamine to yield formylglycinamidine ribonucleotide (FGAM) and glutamate. The FGAM synthase complex is composed of three subunits. PurQ produces an ammonia molecule by converting glutamine to glutamate. PurL transfers the ammonia molecule to FGAR to form FGAM in an ATP-dependent manner. PurS interacts with PurQ and PurL and is thought to assist in the transfer of the ammonia molecule from PurQ to PurL K01952 - 6.3.5.3 0.0000000000000000000000000000000000000000000000000000000000000000000000003246 254.0
DYD1_k127_6784702_10 Lipid A Biosynthesis N-terminal domain - - - 0.000003341 55.0
DYD1_k127_6784702_2 Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily K02015 - - 0.00000000000000000000000000000000000000000000000000000000000001322 230.0
DYD1_k127_6784702_3 PFAM Nitroreductase - - - 0.00000000000000000000000000000000000000000000000000000000000004359 218.0
DYD1_k127_6784702_4 PFAM ABC transporter related K02013 - 3.6.3.34 0.00000000000000000000000000000000000000000000000001898 190.0
DYD1_k127_6784702_5 PFAM periplasmic binding protein K02016 - - 0.00000000000000000000000000000000000000000000001995 181.0
DYD1_k127_6784702_6 Toxic component of a toxin-antitoxin (TA) module. An RNase K18828 - - 0.00000000000000000000000000000001196 130.0
DYD1_k127_6784702_7 Protein-tyrosine phosphatase - - - 0.0000000000000000000329 98.0
DYD1_k127_6784702_9 geranylgeranyl reductase - - - 0.00000003301 65.0
DYD1_k127_6792374_0 sterol desaturase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000007365 257.0
DYD1_k127_6792374_1 Catalyzes the formation of the alpha-1,6-glucosidic linkages in glycogen by scission of a 1,4-alpha-linked oligosaccharide from growing alpha-1,4-glucan chains and the subsequent attachment of the oligosaccharide to the alpha-1,6 position K00700 - 2.4.1.18 0.000000000001025 70.0
DYD1_k127_6792374_2 domain protein K20276 - - 0.00000003348 66.0
DYD1_k127_6808908_0 Uncharacterized protein conserved in bacteria (DUF2062) K09928 - - 0.000001929 56.0
DYD1_k127_6810370_1 Thrombospondin type 3 repeat - - - 0.00000000000000000000002474 104.0
DYD1_k127_6813056_0 Belongs to the GSP D family K02666 - - 0.00000000000000000000000000000000001501 147.0
DYD1_k127_6813810_0 Catalyzes the methyl esterification of L-isoaspartyl residues in peptides and proteins that result from spontaneous decomposition of normal L-aspartyl and L-asparaginyl residues. It plays a role in the repair and or degradation of damaged proteins K00573 GO:0003674,GO:0003824,GO:0004719,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006464,GO:0006479,GO:0006807,GO:0008150,GO:0008152,GO:0008168,GO:0008171,GO:0008213,GO:0008276,GO:0008757,GO:0009987,GO:0010340,GO:0016740,GO:0016741,GO:0019538,GO:0032259,GO:0036211,GO:0043170,GO:0043412,GO:0043414,GO:0044237,GO:0044238,GO:0044260,GO:0044267,GO:0044424,GO:0044464,GO:0051998,GO:0071704,GO:0140096,GO:1901564 2.1.1.77 0.000000000000000000000000000000000000000000000000000000000000001654 224.0
DYD1_k127_6813810_1 Cysteine-rich secretory protein family - - - 0.0000000000000000000001058 106.0
DYD1_k127_6821969_0 Molybdopterin oxidoreductase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001118 544.0
DYD1_k127_6821969_1 Cytochrome c K00373,K00405,K17052 GO:0003674,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006082,GO:0006807,GO:0008150,GO:0008152,GO:0009987,GO:0016043,GO:0016530,GO:0022607,GO:0034622,GO:0042126,GO:0042128,GO:0043436,GO:0043933,GO:0044085,GO:0044237,GO:0044281,GO:0044424,GO:0044464,GO:0051131,GO:0065003,GO:0071704,GO:0071840,GO:0071941,GO:0140104,GO:2001057 - 0.000000000000000000000000000000000000000000000000000000000000000000000000000001462 286.0
DYD1_k127_6821969_2 2 iron, 2 sulfur cluster binding K13643 - - 0.0000000000000000000001634 103.0
DYD1_k127_6845778_0 cytochrome C peroxidase - - - 0.0000000000000000000000000000000000000000000000000000000000000009677 243.0
DYD1_k127_6845778_1 Catalyzes the condensation reaction of fatty acid synthesis by the addition to an acyl acceptor of two carbons from malonyl-ACP K09458 - 2.3.1.179 0.00000000000000000000000000000000000000000000000000000385 194.0
DYD1_k127_6845778_2 amine dehydrogenase activity K01179,K03333,K12287 - 1.1.3.6,3.2.1.4 0.0000000000000000000000000000000000000005692 157.0
DYD1_k127_6845778_3 COG0463 Glycosyltransferases involved in cell wall biogenesis - - - 0.000000000000000000000000000000000002564 152.0
DYD1_k127_6845778_4 COG1886 Flagellar motor switch type III secretory pathway K02417 - - 0.000000001273 65.0
DYD1_k127_6855274_0 AAA domain, putative AbiEii toxin, Type IV TA system K01990 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003624 391.0
DYD1_k127_6855274_1 The UvrABC repair system catalyzes the recognition and processing of DNA lesions. UvrC both incises the 5' and 3' sides of the lesion. The N-terminal half is responsible for the 3' incision and the C-terminal half is responsible for the 5' incision K03703 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000001875 274.0
DYD1_k127_6855274_2 ABC-2 family transporter protein K01992 - - 0.000000000000000000000000000000000000000000000000002368 193.0
DYD1_k127_6855274_3 transport system, permease component K01992 - - 0.0000000000000000000000000000000000000006727 169.0
DYD1_k127_6855274_4 thioesterase K07107 - - 0.00000000000000000000000000000000000006802 147.0
DYD1_k127_6855274_5 SMART protein phosphatase 2C domain protein - - - 0.000000000000005554 88.0
DYD1_k127_6855274_6 PFAM Adenylate and Guanylate cyclase catalytic domain K01768 - 4.6.1.1 0.00004927 56.0
DYD1_k127_6860817_0 component I K01665 - 2.6.1.85 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000001503 307.0
DYD1_k127_6860817_1 Belongs to the class-IV pyridoxal-phosphate-dependent aminotransferase family K00826 - 2.6.1.42 0.0000000000000000000000000000000000000000000000000000006347 203.0
DYD1_k127_6860817_2 phospholipase Carboxylesterase - - - 0.0000000000000000000000009893 107.0
DYD1_k127_6860817_3 NIF3 (NGG1p interacting factor 3) - GO:0003674,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005634,GO:0005737,GO:0005739,GO:0006355,GO:0007275,GO:0007399,GO:0008134,GO:0008150,GO:0009889,GO:0009890,GO:0009891,GO:0009892,GO:0009893,GO:0009987,GO:0010468,GO:0010556,GO:0010557,GO:0010558,GO:0010604,GO:0010605,GO:0010628,GO:0019219,GO:0019222,GO:0022008,GO:0030154,GO:0030182,GO:0031323,GO:0031324,GO:0031325,GO:0031326,GO:0031327,GO:0031328,GO:0032501,GO:0032502,GO:0042802,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0044424,GO:0044444,GO:0044464,GO:0045893,GO:0045934,GO:0045935,GO:0048518,GO:0048519,GO:0048522,GO:0048523,GO:0048699,GO:0048731,GO:0048856,GO:0048869,GO:0050789,GO:0050794,GO:0051171,GO:0051172,GO:0051173,GO:0051252,GO:0051253,GO:0051254,GO:0060255,GO:0065007,GO:0080090,GO:1902679,GO:1902680,GO:1903506,GO:1903507,GO:1903508,GO:2000112,GO:2001141 - 0.00000000000000000000009878 102.0
DYD1_k127_688325_0 Tryptophan 2,3-dioxygenase K00453 - 1.13.11.11 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006579 363.0
DYD1_k127_688325_1 Catalyzes the hydrolysis of N-formyl-L-kynurenine to L- kynurenine, the second step in the kynurenine pathway of tryptophan degradation K07130 GO:0003674,GO:0003824,GO:0004061,GO:0005488,GO:0006082,GO:0006520,GO:0006568,GO:0006569,GO:0006576,GO:0006586,GO:0006725,GO:0006766,GO:0006767,GO:0006807,GO:0008150,GO:0008152,GO:0008270,GO:0009056,GO:0009063,GO:0009072,GO:0009074,GO:0009308,GO:0009310,GO:0009987,GO:0016054,GO:0016787,GO:0016810,GO:0016811,GO:0019439,GO:0019441,GO:0019752,GO:0032787,GO:0034641,GO:0042180,GO:0042402,GO:0042430,GO:0042436,GO:0042537,GO:0043167,GO:0043169,GO:0043420,GO:0043436,GO:0044106,GO:0044237,GO:0044238,GO:0044248,GO:0044270,GO:0044281,GO:0044282,GO:0046218,GO:0046395,GO:0046483,GO:0046700,GO:0046872,GO:0046914,GO:0070189,GO:0071704,GO:1901360,GO:1901361,GO:1901564,GO:1901565,GO:1901575,GO:1901605,GO:1901606 3.5.1.9 0.0000000000000000000000000000000000000000000000000003695 192.0
DYD1_k127_688325_2 GTPase that associates with the 50S ribosomal subunit and may have a role during protein synthesis or ribosome biogenesis K03665 - - 0.0000000000000000000000000000000000000004907 153.0
DYD1_k127_688325_3 Translation initiation inhibitor, yjgF family K15067 - 3.5.99.5 0.000000000000000000000000000000007807 129.0
DYD1_k127_688325_4 Transposase IS200 like - - - 0.00000000000003398 79.0
DYD1_k127_688325_5 23S rRNA-intervening sequence protein - - - 0.0000000001112 64.0
DYD1_k127_688325_6 23S rRNA-intervening sequence protein - - - 0.0000005189 53.0
DYD1_k127_6899242_0 Facilitates transcription termination by a mechanism that involves Rho binding to the nascent RNA, activation of Rho's RNA-dependent ATPase activity, and release of the mRNA from the DNA template K03628 - - 1.639e-203 646.0
DYD1_k127_6899242_1 Peptidase family S41 - - - 0.000000000000000000000000000000000000000000000000000000000000000000001853 259.0
DYD1_k127_6899242_2 rejects L-amino acids rather than detecting D-amino acids in the active site. By recycling D-aminoacyl-tRNA to D-amino acids and free tRNA molecules, this enzyme counteracts the toxicity associated with the formation of D-aminoacyl-tRNA entities in vivo and helps enforce protein L-homochirality K07560 GO:0002161,GO:0003674,GO:0003824,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006139,GO:0006399,GO:0006450,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0009987,GO:0016070,GO:0016787,GO:0016788,GO:0034641,GO:0034660,GO:0043170,GO:0044237,GO:0044238,GO:0044424,GO:0044464,GO:0046483,GO:0051499,GO:0051500,GO:0052689,GO:0065007,GO:0065008,GO:0071704,GO:0090304,GO:0106074,GO:0140098,GO:0140101,GO:1901360 - 0.00000000000000000000000000000000000000000001655 169.0
DYD1_k127_6899242_3 Catalyzes the phosphorylation of the 3'-hydroxyl group of dephosphocoenzyme A to form coenzyme A K00859 GO:0003674,GO:0003824,GO:0004140,GO:0006139,GO:0006163,GO:0006164,GO:0006725,GO:0006732,GO:0006753,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009108,GO:0009117,GO:0009150,GO:0009152,GO:0009165,GO:0009259,GO:0009260,GO:0009987,GO:0015936,GO:0015937,GO:0016301,GO:0016310,GO:0016740,GO:0016772,GO:0016773,GO:0018130,GO:0019438,GO:0019637,GO:0019693,GO:0033865,GO:0033866,GO:0033875,GO:0034030,GO:0034032,GO:0034033,GO:0034641,GO:0034654,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0046390,GO:0046483,GO:0051186,GO:0051188,GO:0055086,GO:0071704,GO:0072521,GO:0072522,GO:0090407,GO:1901135,GO:1901137,GO:1901293,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576 2.7.1.24 0.0000000000000000000000000000000000006125 147.0
DYD1_k127_6899242_4 Belongs to the LOG family K06966 - 3.2.2.10 0.000000000000000000000001449 106.0
DYD1_k127_6901448_0 3-Beta hydroxysteroid dehydrogenase isomerase K21271,K22320 - 1.1.1.394,1.1.1.412 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000049 435.0
DYD1_k127_6901448_1 Membrane protease subunits, stomatin prohibitin homologs - - - 0.0000000000000000000000000000000000000001048 161.0
DYD1_k127_6901448_2 RNA recognition motif - - - 0.000000000000000000000000000000000172 135.0
DYD1_k127_6901448_3 RNA recognition motif - - - 0.00000000000000005387 84.0
DYD1_k127_6917864_0 Type I phosphodiesterase / nucleotide pyrophosphatase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007188 322.0
DYD1_k127_6917864_1 Nitroreductase family - - - 0.00000000000000000000000000000000000000000000000000000000000000000000002194 248.0
DYD1_k127_6917864_2 Catalyzes the conversion of N5-carboxyaminoimidazole ribonucleotide (N5-CAIR) to 4-carboxy-5-aminoimidazole ribonucleotide (CAIR) K01588 - 5.4.99.18 0.0000000000000000000000000000000000000000000000000000000013 205.0
DYD1_k127_6917864_3 Galactose oxidase, central domain - - - 0.0000000000000000000000000000000000000000000000000001603 200.0
DYD1_k127_6917864_4 nuclease activity - - - 0.0000000000106 68.0
DYD1_k127_6917864_5 - - - - 0.00000008366 57.0
DYD1_k127_6917864_6 COG2834 Outer membrane lipoprotein-sorting protein - - - 0.00004273 55.0
DYD1_k127_6923109_0 protein ubiquitination - - - 0.00008145 57.0
DYD1_k127_6933485_0 Glutamate formiminotransferase K00603,K13990 - 2.1.2.5,4.3.1.4 1.44e-229 727.0
DYD1_k127_6933485_2 Amidohydrolase family K01468 - 3.5.2.7 0.000000000000000000000000000000000000000000000000000000000000111 223.0
DYD1_k127_6965680_0 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain K00074 - 1.1.1.157 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000002727 307.0
DYD1_k127_6965680_1 Belongs to the enoyl-CoA hydratase isomerase family K15866 - 5.3.3.18 0.0000000000000000000000000000000000000000000000000000000000000000000000002407 255.0
DYD1_k127_701708_0 Broad specificity carboxypetidase that releases amino acids sequentially from the C-terminus, including neutral, aromatic, polar and basic residues K01299 - 3.4.17.19 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005287 547.0
DYD1_k127_701708_1 Involved in the biosynthesis of the central metabolite phospho-alpha-D-ribosyl-1-pyrophosphate (PRPP) via the transfer of pyrophosphoryl group from ATP to 1-hydroxyl of ribose-5-phosphate (Rib-5-P) K00948 - 2.7.6.1 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001137 342.0
DYD1_k127_701708_2 Polynucleotide kinase 3 phosphatase - - - 0.00000000000000000000000000000000000001958 161.0
DYD1_k127_701708_3 domain, Protein - - - 0.00000000000000009103 85.0
DYD1_k127_701708_4 Right handed beta helix region - - - 0.000000000004006 79.0
DYD1_k127_701708_5 Domain of unknown function (DUF4136) - - - 0.0000002903 60.0
DYD1_k127_701708_6 FAD dependent oxidoreductase - - - 0.0002427 46.0
DYD1_k127_712635_0 PFAM Prenyltransferase squalene oxidase K06045 - 4.2.1.129,5.4.99.17 0.0000000000000000000000000000000000000000000000000000000000000000000002071 246.0
DYD1_k127_712635_1 PKD domain - - - 0.0000000000000000000000000000000000000000000006041 182.0
DYD1_k127_712635_2 Peptide chain release factor 2 directs the termination of translation in response to the peptide chain termination codons UGA and UAA K02836 - - 0.0000001912 55.0
DYD1_k127_719437_0 Catalyzes the two-step NADP-dependent conversion of GDP- 4-dehydro-6-deoxy-D-mannose to GDP-fucose, involving an epimerase and a reductase reaction K02377 - 1.1.1.271 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001223 407.0
DYD1_k127_719437_1 Catalyzes the conversion of GDP-D-mannose to GDP-4- dehydro-6-deoxy-D-mannose K01711 - 4.2.1.47 0.0000000000000000000000000000000000000000000000000000000000000000003347 231.0
DYD1_k127_719437_2 Major facilitator Superfamily - - - 0.0000000000000000000000000000000000000000006404 166.0
DYD1_k127_720595_0 Catalyzes the condensation reaction of fatty acid synthesis by the addition to an acyl acceptor of two carbons from malonyl-ACP. Catalyzes the first condensation reaction which initiates fatty acid synthesis and may therefore play a role in governing the total rate of fatty acid production. Possesses both acetoacetyl-ACP synthase and acetyl transacylase activities. Its substrate specificity determines the biosynthesis of branched- chain and or straight-chain of fatty acids K00648 - 2.3.1.180 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002234 340.0
DYD1_k127_720595_1 Catalyzes the reversible formation of acyl-phosphate (acyl-PO(4)) from acyl- acyl-carrier-protein (acyl-ACP). This enzyme utilizes acyl-ACP as fatty acyl donor, but not acyl-CoA K03621 - 2.3.1.15 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001755 317.0
DYD1_k127_720595_2 COG4166 ABC-type oligopeptide transport system, periplasmic component K13893 - - 0.000000000000000000000000000000000000000000000000000000003246 205.0
DYD1_k127_720595_3 malonyl coa-acyl carrier protein transacylase K00645 - 2.3.1.39 0.0000000000000000000000000000000000000000000000007376 189.0
DYD1_k127_720595_4 damaged site, the DNA wraps around one UvrB monomer. DNA wrap is dependent on ATP binding by UvrB and probably causes local melting of the DNA helix, facilitating insertion of UvrB beta-hairpin between the DNA strands. Then UvrB probes one DNA strand for the presence of a lesion. If a lesion is found the UvrA subunits dissociate and the UvrB-DNA preincision complex is formed. This complex is subsequently bound by UvrC and the second UvrB is released. If no lesion is found, the DNA wraps around the other UvrB subunit that will check the other stand for damage K03702 - - 0.0000000000000000000000000000000000001198 147.0
DYD1_k127_720595_5 Participates in both transcription termination and antitermination K02600 - - 0.00000000004526 63.0
DYD1_k127_720595_6 Belongs to the bacterial ribosomal protein bL32 family K02911 GO:0003674,GO:0003735,GO:0005198 - 0.0000000001027 63.0
DYD1_k127_728810_0 TIGRFAM ATPase, FliI YscN family K02412 - 3.6.3.14 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006797 462.0
DYD1_k127_728810_1 flagellar motor switch protein K02410 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009366 336.0
DYD1_k127_728810_2 Belongs to the flagella basal body rod proteins family K02388 - - 0.0000000000000000000000000007137 117.0
DYD1_k127_728810_3 Flagellar hook-basal body complex protein FliE K02408 - - 0.00000000000000002572 85.0
DYD1_k127_728810_4 Flagellar hook capping protein K02389 - - 0.0000000000001205 80.0
DYD1_k127_728810_5 Flagellar assembly protein FliH K02411 - - 0.0000002636 63.0
DYD1_k127_728810_6 TIGRFAM flagellar export protein FliJ K02413 - - 0.0000007465 57.0
DYD1_k127_728810_7 Flagellar M-ring protein C-terminal K02409 - - 0.000001895 61.0
DYD1_k127_728810_8 Flagellar hook-length control protein K02414 - - 0.0001238 55.0
DYD1_k127_728810_9 Flagellar basal body protein K02390 - - 0.0009522 42.0
DYD1_k127_73747_0 type I phosphodiesterase nucleotide pyrophosphatase - - - 0.0000000000000000000000001816 122.0
DYD1_k127_739960_0 PQQ-like domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006759 582.0
DYD1_k127_739960_1 protein kinase related protein - - - 0.0000000000000000000000000000000000000000000000000000000000000004953 237.0
DYD1_k127_739960_2 Catalyzes the activation of phenylacetic acid (PA) to phenylacetyl-CoA (PA-CoA) - - - 0.00000000000000000007125 91.0
DYD1_k127_750944_0 Belongs to the universal ribosomal protein uS2 family K02967 GO:0003674,GO:0003735,GO:0005198,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0006412,GO:0006518,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0015935,GO:0019538,GO:0022626,GO:0022627,GO:0032991,GO:0034641,GO:0034645,GO:0043043,GO:0043170,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:0071704,GO:1901564,GO:1901566,GO:1901576,GO:1990904 - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000005088 287.0
DYD1_k127_750944_1 Condensation of UDP-2,3-diacylglucosamine and 2,3- diacylglucosamine-1-phosphate to form lipid A disaccharide, a precursor of lipid A, a phosphorylated glycolipid that anchors the lipopolysaccharide to the outer membrane of the cell K00748 - 2.4.1.182 0.0000000000000000000000000000000000000000000671 174.0
DYD1_k127_750944_2 Associates with the EF-Tu.GDP complex and induces the exchange of GDP to GTP. It remains bound to the aminoacyl-tRNA.EF- Tu.GTP complex up to the GTP hydrolysis stage on the ribosome K02357 GO:0003674,GO:0003676,GO:0003723,GO:0003746,GO:0005488,GO:0006412,GO:0006414,GO:0006518,GO:0006807,GO:0008135,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0019538,GO:0034641,GO:0034645,GO:0043043,GO:0043170,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0071704,GO:0097159,GO:1901363,GO:1901564,GO:1901566,GO:1901576 - 0.00000000000000000000000000000002268 132.0
DYD1_k127_754964_0 DEAD-box RNA helicase involved in various cellular processes at low temperature, including ribosome biogenesis, mRNA degradation and translation initiation K05592 - 3.6.4.13 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001441 375.0
DYD1_k127_754964_1 Flavin prenyltransferase that catalyzes the synthesis of the prenylated FMN cofactor (prenyl-FMN) for 4-hydroxy-3- polyprenylbenzoic acid decarboxylase UbiD. The prenyltransferase is metal-independent and links a dimethylallyl moiety from dimethylallyl monophosphate (DMAP) to the flavin N5 and C6 atoms of FMN K03186 - 2.5.1.129 0.000000000000000000003022 94.0
DYD1_k127_757079_0 Utp--glucose-1-phosphate uridylyltransferase K00972,K11442 - 2.7.7.23,2.7.7.83 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002489 408.0
DYD1_k127_757079_1 beta-1,4-mannooligosaccharide phosphorylase K20885 - 2.4.1.339,2.4.1.340 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000005863 284.0
DYD1_k127_757079_2 One of several proteins that assist in the late maturation steps of the functional core of the 30S ribosomal subunit. Helps release RbfA from mature subunits. May play a role in the assembly of ribosomal proteins into the subunit. Circularly permuted GTPase that catalyzes slow GTP hydrolysis, GTPase activity is stimulated by the 30S ribosomal subunit K06949 - 3.1.3.100 0.000000000000000000000000000000000000000000000000000000000000000656 225.0
DYD1_k127_757079_3 Domain of unknown function (DUF362) - - - 0.000000000000000000000000001587 126.0
DYD1_k127_757079_4 Endonuclease containing a URI domain K07461 - - 0.000000000000002951 79.0
DYD1_k127_757686_0 56kDa selenium binding protein (SBP56) K17285 - - 1.362e-238 745.0
DYD1_k127_757686_1 phosphoglycerate mutase K15635 - 5.4.2.12 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001215 416.0
DYD1_k127_757686_2 Membrane - - - 0.00000000000000000000000000000000000000000000000000000000002491 227.0
DYD1_k127_757686_3 enzyme involved in biosynthesis of extracellular polysaccharides - - - 0.0000000000000000000000000000004643 124.0
DYD1_k127_757686_4 conserved protein (DUF2203) - - - 0.000000000000000001347 91.0
DYD1_k127_757686_5 Tetratricopeptide repeat - - - 0.0000000001365 75.0
DYD1_k127_757686_6 Belongs to the peptidase S8 family K01347 - 3.4.21.72 0.00000005919 66.0
DYD1_k127_762264_0 Non-essential cell division protein that could be required for efficient cell constriction - - - 0.00000000000000000000000000000000000000000007136 179.0
DYD1_k127_762264_1 TIGRFAM HAD-superfamily hydrolase, subfamily IA, variant 3 K01838 - 5.4.2.6 0.0000000000000000000000000000000000000006983 157.0
DYD1_k127_765545_0 Belongs to the ABC transporter superfamily K02031,K02032 - - 0.0000000000000000000000000000000000000000000001028 169.0
DYD1_k127_765545_1 Function proposed based on presence of conserved amino acid motif, structural feature or limited homology K00996,K03606 - 2.7.8.6 0.000000000000000000000000003466 122.0
DYD1_k127_767915_0 serine-type endopeptidase activity - - - 0.0000000000000000000008886 102.0
DYD1_k127_773124_0 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) - - - 0.00000000000000000000000002207 120.0
DYD1_k127_773428_0 PFAM NAD-dependent epimerase dehydratase K01784 - 5.1.3.2 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007292 372.0
DYD1_k127_773428_1 Carbamoyltransferase C-terminus K00612 - - 0.0000000000000000000000000000000000000007861 149.0
DYD1_k127_77345_0 PFAM blue (type 1) copper domain protein - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007845 617.0
DYD1_k127_77345_1 PFAM blue (type 1) copper domain protein - - - 0.0000000000000000000000000000000000000000000000000000000000003369 216.0
DYD1_k127_77345_2 PFAM PKD domain containing protein - - - 0.000000001116 72.0
DYD1_k127_77345_3 - - - - 0.000000007142 68.0
DYD1_k127_77345_4 pathogenesis - - - 0.0000002766 64.0
DYD1_k127_77345_5 PFAM PQQ enzyme repeat - - - 0.000004038 52.0
DYD1_k127_776716_0 Catalyzes the attachment of serine to tRNA(Ser). Is also able to aminoacylate tRNA(Sec) with serine, to form the misacylated tRNA L-seryl-tRNA(Sec), which will be further converted into selenocysteinyl-tRNA(Sec) K01875 - 6.1.1.11 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001309 430.0
DYD1_k127_776716_1 - - - - 0.0000000000000001161 84.0
DYD1_k127_776716_2 Protein of unknown function (DUF433) - - - 0.000000000000001762 81.0
DYD1_k127_776716_3 Repeat domain in Vibrio, Colwellia, Bradyrhizobium and Shewanella - - - 0.00000000000001624 87.0
DYD1_k127_776716_4 PFAM Cyclic nucleotide-binding K01420,K21563 - - 0.0003284 46.0
DYD1_k127_80210_0 Asparagine synthase, glutamine-hydrolyzing K01953 - 6.3.5.4 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001653 506.0
DYD1_k127_80210_1 carbamoyl transferase, NodU family K00612 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007619 435.0
DYD1_k127_80210_2 Glycosyl transferases group 1 K19424 - - 0.0000000000000000000000000000000000000000000000000000000000000000002807 243.0
DYD1_k127_808426_0 COG0477 Permeases of the major facilitator superfamily - - - 0.000000000000000000000000000000000000000000000000000000006664 214.0
DYD1_k127_808426_1 Low-density lipoprotein receptor domain class A - - - 0.00000007516 66.0
DYD1_k127_808426_2 Required for morphogenesis and for the elongation of the flagellar filament by facilitating polymerization of the flagellin monomers at the tip of growing filament. Forms a capping structure, which prevents flagellin subunits (transported through the central channel of the flagellum) from leaking out without polymerization at the distal end K02407 - - 0.000008338 49.0
DYD1_k127_808426_3 rhs family - - - 0.00003304 55.0
DYD1_k127_815370_0 Glycosyltransferase family 9 (heptosyltransferase) - - - 0.000000000000000000000000000001329 133.0
DYD1_k127_815370_1 Domain of unknown function (DUF4159) - - - 0.000000008327 66.0
DYD1_k127_815370_2 acetyltransferase - - - 0.0000001567 63.0
DYD1_k127_834536_0 amine dehydrogenase activity K13730 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000005622 286.0
DYD1_k127_834536_1 PFAM SMP-30 Gluconolaconase - - - 0.0000000000000000000000000001709 125.0
DYD1_k127_836080_0 Catalyzes the rearrangement of 1-deoxy-D-xylulose 5- phosphate (DXP) to produce the thiazole phosphate moiety of thiamine. Sulfur is provided by the thiocarboxylate moiety of the carrier protein ThiS. In vitro, sulfur can be provided by H(2)S K03149 - 2.8.1.10 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004347 307.0
DYD1_k127_836080_1 Thiol-specific peroxidase that catalyzes the reduction of hydrogen peroxide and organic hydroperoxides to water and alcohols, respectively. Plays a role in cell protection against oxidative stress by detoxifying peroxides K11065 - 1.11.1.15 0.00000000000000000000000000000000000000000000000000003898 192.0
DYD1_k127_836080_2 Zinc metalloprotease (Elastase) - - - 0.0000000000000000000000000000000000006317 156.0
DYD1_k127_836080_3 Belongs to the thioredoxin family K03671 - - 0.000000000000000000000000000000002378 136.0
DYD1_k127_836080_4 ThiS family K03154 - - 0.00000002358 58.0
DYD1_k127_836080_5 Peptidase family M28 K19702 - 3.4.11.24 0.00004276 56.0
DYD1_k127_840497_0 COG0382 4-hydroxybenzoate polyprenyltransferase and related K03179 - 2.5.1.39 0.00000000000000000000000000000000000000000000000000000000000000000000003464 251.0
DYD1_k127_840497_1 Glycosyl transferases group 1 - - - 0.000000000000000000000000000000000003713 154.0
DYD1_k127_840497_2 Transport permease protein K01992,K09690 - - 0.0000000000000000000000000000005813 134.0
DYD1_k127_840497_3 polysaccharide biosynthetic process - - - 0.000004529 52.0
DYD1_k127_840497_4 - - - - 0.00001893 50.0
DYD1_k127_853581_0 ECF sigma factor - - - 0.000000000000000000000000000000000000000000000000000000001471 208.0
DYD1_k127_853581_1 Putative MetA-pathway of phenol degradation - - - 0.0000000000002564 81.0
DYD1_k127_853581_2 PFAM Sulfate transporter antisigma-factor antagonist STAS - - - 0.00000000001335 71.0
DYD1_k127_853581_3 Cysteine-rich secretory protein family - - - 0.000000002371 66.0
DYD1_k127_853581_4 COG0515 Serine threonine protein - - - 0.000009181 51.0
DYD1_k127_855981_0 Bifunctional purine biosynthesis protein PurH K00602 - 2.1.2.3,3.5.4.10 0.0000000000000000000000000000000000000000000000000000000000001019 224.0
DYD1_k127_855981_1 Putative restriction endonuclease - - - 0.00000000000000000000000000000000000000000001694 168.0
DYD1_k127_855981_2 - - - - 0.000000000000000000000000000000000000193 151.0
DYD1_k127_8651_0 Flagellin is the subunit protein which polymerizes to form the filaments of bacterial flagella K02406 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002249 415.0
DYD1_k127_8651_1 DNA restriction-modification system - - - 0.0000000000000000000000000000000000000206 151.0
DYD1_k127_8651_2 Could accelerate the degradation of some genes transcripts potentially through selective RNA binding K03563 - - 0.00000000000000000000008579 102.0
DYD1_k127_8651_3 Alpha beta hydrolase K18092 - - 0.0000000000004845 81.0
DYD1_k127_8651_4 Binds to the C-terminal region of flagellin, which is implicated in polymerization, and participates in the assembly of the flagellum K13626 - - 0.000000000003955 68.0
DYD1_k127_871001_0 Belongs to the NAD(P)-dependent epimerase dehydratase family. dTDP-glucose dehydratase subfamily K01710 - 4.2.1.46 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004506 438.0
DYD1_k127_871001_1 alginic acid biosynthetic process - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001272 427.0
DYD1_k127_871001_2 dTDP-4-dehydrorhamnose 3,5-epimerase K01790 - 5.1.3.13 0.00000000000000000000001956 100.0
DYD1_k127_873164_0 Converts 2,5-diamino-6-(ribosylamino)-4(3h)-pyrimidinone 5'-phosphate into 5-amino-6-(ribosylamino)-2,4(1h,3h)- pyrimidinedione 5'-phosphate K11752 - 1.1.1.193,3.5.4.26 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000118 329.0
DYD1_k127_873164_1 Transfers and isomerizes the ribose moiety from AdoMet to the 7-aminomethyl group of 7-deazaguanine (preQ1-tRNA) to give epoxyqueuosine (oQ-tRNA) K07568 - 2.4.99.17 0.000000000000000000000000000000000000000000000000818 178.0
DYD1_k127_873164_2 Dolichyl-phosphate-mannose-protein mannosyltransferase - - - 0.000000000000000000000000000000000005251 156.0
DYD1_k127_873164_3 PFAM alkyl hydroperoxide reductase Thiol specific antioxidant Mal allergen - - - 0.00000000000000000000000006348 123.0
DYD1_k127_873164_4 Thiol-disulfide oxidoreductase which is required in disulfide reduction during c-type cytochrome synthesis. May accept reducing equivalents from CcdA, leading to breakage of disulfide bonds in apocytochrome c - GO:0008150,GO:0009987,GO:0016043,GO:0017004,GO:0022607,GO:0034622,GO:0043933,GO:0044085,GO:0065003,GO:0071840 - 0.000000000000000000000416 110.0
DYD1_k127_873164_5 Thioredoxin-like - - - 0.0000000000006615 81.0
DYD1_k127_89935_0 peroxiredoxin activity - - - 0.00000000000000000000000000000000000000000000000000000000000000000002395 255.0
DYD1_k127_89935_1 M6 family metalloprotease domain protein - - - 0.0000000000000000000000005045 121.0
DYD1_k127_89935_2 COG3209 Rhs family protein - - - 0.000000000004283 75.0
DYD1_k127_904524_0 Glucose / Sorbosone dehydrogenase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000263 356.0
DYD1_k127_904524_1 Putative restriction endonuclease - - - 0.00000000000000007806 88.0
DYD1_k127_904524_2 amino acid activation for nonribosomal peptide biosynthetic process K06045 - 4.2.1.129,5.4.99.17 0.00003355 57.0
DYD1_k127_914198_0 Catalyzes the oxidation of erythronate-4-phosphate to 3- hydroxy-2-oxo-4-phosphonooxybutanoate K03473 GO:0000166,GO:0003674,GO:0003824,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006081,GO:0006725,GO:0006732,GO:0006766,GO:0006767,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0008614,GO:0008615,GO:0009058,GO:0009108,GO:0009110,GO:0009987,GO:0016491,GO:0016614,GO:0016616,GO:0017144,GO:0018130,GO:0019438,GO:0019637,GO:0033711,GO:0034641,GO:0036001,GO:0036094,GO:0042364,GO:0042816,GO:0042819,GO:0042822,GO:0042823,GO:0044237,GO:0044249,GO:0044271,GO:0044281,GO:0044283,GO:0044424,GO:0044444,GO:0044464,GO:0046184,GO:0046483,GO:0048037,GO:0050662,GO:0051186,GO:0051188,GO:0051287,GO:0055114,GO:0071704,GO:0072524,GO:0072525,GO:0090407,GO:0097159,GO:1901265,GO:1901360,GO:1901362,GO:1901363,GO:1901564,GO:1901566,GO:1901576,GO:1901615,GO:1901617 1.1.1.290 0.00000000000000000000000000000000000000000000000000000000000000008133 235.0
DYD1_k127_914319_0 Catalyzes the formation of phosphoribosylamine from phosphoribosylpyrophosphate (PRPP) and glutamine K00764 - 2.4.2.14 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002733 481.0
DYD1_k127_915389_0 Catalyzes the reversible interconversion of serine and glycine with tetrahydrofolate (THF) serving as the one-carbon carrier. This reaction serves as the major source of one-carbon groups required for the biosynthesis of purines, thymidylate, methionine, and other important biomolecules. Also exhibits THF- independent aldolase activity toward beta-hydroxyamino acids, producing glycine and aldehydes, via a retro-aldol mechanism K00600 - 2.1.2.1 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000356 510.0
DYD1_k127_923847_0 Gamma-glutamyltranspeptidase K00681 - 2.3.2.2,3.4.19.13 0.000000000000000000000000000000000000000000000000000005799 195.0
DYD1_k127_923847_1 COG3264 Small-conductance mechanosensitive channel K05802 - - 0.00000000000000001772 96.0
DYD1_k127_939243_0 Exopolysaccharide biosynthesis polyprenyl glycosylphosphotransferase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000001161 280.0
DYD1_k127_952416_0 Tryptophanyl-tRNA synthetase K01867 - 6.1.1.2 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005539 396.0
DYD1_k127_952416_1 Participates in chromosomal partition during cell division. May act via the formation of a condensin-like complex containing Smc and ScpB that pull DNA away from mid-cell into both cell halves K05896 - - 0.00000000000000000000000000000000000000000000000001003 192.0
DYD1_k127_952416_2 Putative restriction endonuclease - - - 0.000000000000000000000000000000004676 135.0
DYD1_k127_952416_3 YjgF/chorismate_mutase-like, putative endoribonuclease - - - 0.000000000000000000003286 95.0
DYD1_k127_952416_4 CAAX protease self-immunity - - - 0.0000001197 55.0
DYD1_k127_952926_0 Binds to the C-terminal region of flagellin, which is implicated in polymerization, and participates in the assembly of the flagellum K13626 - - 0.00000000000000000000000000000003458 134.0
DYD1_k127_952926_1 Belongs to the bacterial flagellin family K02397 - - 0.0000000009887 72.0
DYD1_k127_966400_0 PFAM Acyl-CoA dehydrogenase, C-terminal domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004504 494.0
DYD1_k127_966400_1 Catalyzes the formation of dTDP-glucose, from dTTP and glucose 1-phosphate, as well as its pyrophosphorolysis K00973 - 2.7.7.24 0.0000000000000000000000000000000000000000000000000000000000000000000000000002002 259.0
DYD1_k127_966400_2 Hydrolyzes cAMP to 5'-AMP. Plays an important regulatory role in modulating the intracellular concentration of cAMP, thereby influencing cAMP-dependent processes - - - 0.000000000000000000000000000000005449 143.0
DYD1_k127_967645_0 von Willebrand factor, type A K07114 - - 0.0000000000000000000000000000000000000000000000000000000000000000006124 243.0
DYD1_k127_967645_1 protein (some members contain a von Willebrand factor type A (vWA) domain) - - - 0.000000000000000000000000000000000000000000000000004654 186.0
DYD1_k127_967645_2 von Willebrand factor, type A K07114 - - 0.00000000000000000000000000000000000000000000257 173.0
DYD1_k127_967645_3 - - - - 0.00000000000000000000000000000000009548 149.0
DYD1_k127_971748_0 COG2204 Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains K02481 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003355 418.0
DYD1_k127_971748_1 Structural component of flagellum, the bacterial motility apparatus. Part of the rod structure of flagellar basal body K02387 - - 0.0003293 49.0
DYD1_k127_980875_0 ATP-grasp domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001175 609.0
DYD1_k127_980875_1 Catalyzes the ferredoxin-dependent oxidative decarboxylation of arylpyruvates K00179,K08941 - 1.2.7.8 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004616 545.0
DYD1_k127_980875_2 Beta-eliminating lyase K01667 - 4.1.99.1 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006223 449.0
DYD1_k127_980875_3 COG1014 Pyruvate ferredoxin oxidoreductase and related 2-oxoacid ferredoxin K00180 - 1.2.7.8 0.000000000000000000000000000000000000000000000001272 200.0
DYD1_k127_991210_0 Tetratricopeptide repeat - - - 0.000000002117 64.0
DYD1_k127_991210_1 gluconolactonase activity K01053,K13735 - 3.1.1.17 0.000336 54.0
DYD1_k127_993187_0 Belongs to the 'phage' integrase family - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002798 450.0
DYD1_k127_993187_1 - - - - 0.00000000000000000000000000000001187 130.0
DYD1_k127_993187_2 - - - - 0.0000000000000000000004438 101.0
DYD1_k127_993187_3 Siphovirus Gp157 - - - 0.0000000002521 63.0
DYD1_k127_996335_0 Linear amide C-N hydrolases, choloylglycine hydrolase family K01442 - 3.5.1.24 0.0000000000000000000000000000000000000000000000001095 187.0
DYD1_k127_996335_1 Maf-like protein K06287 - - 0.000000000000000000000000000000000002567 145.0
DYD1_k127_996335_2 Belongs to the Fur family K03711 - - 0.000000000000000000000000000000000009685 141.0
DYD1_k127_996335_3 4Fe-4S binding domain - - - 0.00000000000000000000000000000000006213 141.0
DYD1_k127_996335_4 Sigma factor PP2C-like phosphatases K07315 - 3.1.3.3 0.00000000000000000000000000003838 132.0
DYD1_k127_996335_5 Produces ATP from ADP in the presence of a proton gradient across the membrane K02114 GO:0005575,GO:0005622,GO:0005623,GO:0006139,GO:0006163,GO:0006164,GO:0006725,GO:0006753,GO:0006754,GO:0006793,GO:0006796,GO:0006807,GO:0006810,GO:0006811,GO:0006812,GO:0008150,GO:0008152,GO:0009058,GO:0009117,GO:0009123,GO:0009124,GO:0009126,GO:0009127,GO:0009141,GO:0009142,GO:0009144,GO:0009145,GO:0009150,GO:0009152,GO:0009156,GO:0009161,GO:0009165,GO:0009167,GO:0009168,GO:0009199,GO:0009201,GO:0009205,GO:0009206,GO:0009259,GO:0009260,GO:0009987,GO:0015672,GO:0015985,GO:0015986,GO:0016020,GO:0016469,GO:0017144,GO:0018130,GO:0019438,GO:0019637,GO:0019693,GO:0032991,GO:0033178,GO:0034220,GO:0034641,GO:0034654,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0044424,GO:0044425,GO:0044464,GO:0045259,GO:0045261,GO:0046034,GO:0046390,GO:0046483,GO:0051179,GO:0051234,GO:0055085,GO:0055086,GO:0071704,GO:0072521,GO:0072522,GO:0090407,GO:0098655,GO:0098660,GO:0098662,GO:0098796,GO:1901135,GO:1901137,GO:1901293,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576,GO:1902600 - 0.00000000000001068 83.0
DYD1_k127_996485_0 Histidine kinase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000003345 282.0
DYD1_k127_996485_1 PFAM response regulator receiver K11329 - - 0.00000000000000000000000000007835 119.0