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Overview

ID MAG00864
Name DYD1_bin.43
Sample SMP0025
Taxonomy
Kingdom Bacteria
Phylum Nitrospirota
Class Nitrospiria
Order Nitrospirales
Family Nitrospiraceae
Genus Nitrospira_D
Species
Assembly information
Completeness (%) 93.39
Contamination (%) 4.28
GC content (%) 57.0
N50 (bp) 25,650
Genome size (bp) 3,466,236

Location

Module

Module ID Module name Total genes Total steps Contain genes Contain steps Percentage of genes Percentage of steps

Genes2977

Gene name Description KEGG GOs EC E-value Score Sequence
DYD1_k127_1046481_0 Belongs to the DNA photolyase family K01669 - 4.1.99.3 4.182e-228 714.0
DYD1_k127_1046481_1 PFAM NAD-dependent epimerase dehydratase - - - 1.82e-200 637.0
DYD1_k127_1046481_11 Belongs to the peptidase S41A family K03797 - 3.4.21.102 0.00000000000000000000000000000003722 130.0
DYD1_k127_1046481_2 Evidence 4 Homologs of previously reported genes of K18912 - 1.14.99.50 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001143 556.0
DYD1_k127_1046481_3 Evidence 4 Homologs of previously reported genes of K18912 - 1.14.99.50 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002 557.0
DYD1_k127_1046481_4 Protein of unknown function (DUF1722) - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003835 533.0
DYD1_k127_1046481_5 Evidence 4 Homologs of previously reported genes of - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003507 437.0
DYD1_k127_1046481_6 cobalamin binding K21089,K21972,K22491 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001695 436.0
DYD1_k127_1046481_7 coenzyme binding K07071 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006463 329.0
DYD1_k127_1046481_8 sirohydrochlorin cobaltochelatase activity - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000006913 248.0
DYD1_k127_1046481_9 Belongs to the Dps family K04047 - - 0.0000000000000000000000000000000000000000000000000000000000000000000001854 242.0
DYD1_k127_1053002_0 AMP-binding enzyme - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002653 612.0
DYD1_k127_1053002_1 AMP-binding enzyme - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002742 603.0
DYD1_k127_1053002_2 reductase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000281 317.0
DYD1_k127_1053002_3 Acetyltransferase (Isoleucine patch superfamily) - - - 0.00000000000000000000000000000000000000000000000004354 189.0
DYD1_k127_1053002_4 PFAM asparagine synthase K01953 - 6.3.5.4 0.000000000000000000000000000000000001676 145.0
DYD1_k127_1053002_5 radical SAM domain protein - - - 0.00000000000000000005051 93.0
DYD1_k127_1053002_6 Lysylphosphatidylglycerol synthase TM region K07027 - - 0.0000004765 59.0
DYD1_k127_1053002_7 oxidoreductase activity, acting on CH-OH group of donors K00059 - 1.1.1.100 0.000002438 49.0
DYD1_k127_1098056_0 protein secretion by the type I secretion system K11004 - - 3.091e-317 979.0
DYD1_k127_1098056_1 Belongs to the aldehyde dehydrogenase family K00130,K00135,K00146,K22187 - 1.2.1.16,1.2.1.20,1.2.1.39,1.2.1.79,1.2.1.8 4.948e-255 794.0
DYD1_k127_1098056_10 Helix-turn-helix - - - 0.000000635 57.0
DYD1_k127_1098056_11 - - - - 0.00004346 49.0
DYD1_k127_1098056_2 Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family K02022,K11003,K12532 - - 1.421e-194 616.0
DYD1_k127_1098056_3 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain K00170 - 1.2.7.1 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001107 570.0
DYD1_k127_1098056_4 Evidence 2a Function of homologous gene experimentally demonstrated in an other organism K00170 - 1.2.7.1 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001144 571.0
DYD1_k127_1098056_9 Pyruvate:ferredoxin oxidoreductase core domain II K00169 - 1.2.7.1 0.000000001861 58.0
DYD1_k127_112390_0 NAD-binding protein involved in the addition of a carboxymethylaminomethyl (cmnm) group at the wobble position (U34) of certain tRNAs, forming tRNA-cmnm(5)s(2)U34 K03495 GO:0000166,GO:0001510,GO:0002097,GO:0002098,GO:0003674,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006139,GO:0006396,GO:0006399,GO:0006400,GO:0006725,GO:0006807,GO:0008033,GO:0008150,GO:0008152,GO:0009451,GO:0009987,GO:0010467,GO:0016070,GO:0030488,GO:0032259,GO:0034470,GO:0034641,GO:0034660,GO:0036094,GO:0043167,GO:0043168,GO:0043170,GO:0043412,GO:0043414,GO:0044237,GO:0044238,GO:0044260,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0048037,GO:0050660,GO:0050662,GO:0071704,GO:0090304,GO:0097159,GO:1901265,GO:1901360,GO:1901363 - 3.848e-296 919.0
DYD1_k127_112390_1 Required for the insertion and or proper folding and or complex formation of integral membrane proteins into the membrane. Involved in integration of membrane proteins that insert both dependently and independently of the Sec translocase complex, as well as at least some lipoproteins. Aids folding of multispanning membrane proteins K03217 - - 9.447e-223 703.0
DYD1_k127_112390_10 Glucosamine-6-phosphate isomerases/6-phosphogluconolactonase K01057 - 3.1.1.31 0.000000000000000000000000000000000000000000000000000000000000000000003786 243.0
DYD1_k127_112390_11 Belongs to the ParB family K03497 - - 0.00000000000000000000000000000000000000000000000000000000001898 216.0
DYD1_k127_112390_12 Polymer-forming cytoskeletal - - - 0.000000000000000000000000000000000000000000000003197 179.0
DYD1_k127_112390_13 Polymer-forming cytoskeletal - - - 0.0000000000000000000000000000000000000000000002252 173.0
DYD1_k127_112390_14 Specifically methylates the N7 position of a guanine in 16S rRNA K03501 - 2.1.1.170 0.000000000000000000000000000000000000003656 154.0
DYD1_k127_112390_15 - - - - 0.000000000000000000000000000000000000009025 151.0
DYD1_k127_112390_16 nuclease - - - 0.0000000000000000000000000000000000001549 146.0
DYD1_k127_112390_18 L,D-transpeptidase catalytic domain - - - 0.0000000000000000000000000000000000003723 148.0
DYD1_k127_112390_19 FKBP-type peptidyl-prolyl cis-trans isomerase K01802 - 5.2.1.8 0.000000000000000000000000000000000002903 143.0
DYD1_k127_112390_2 Belongs to the GPI family K01810,K13810 - 2.2.1.2,5.3.1.9 3.173e-221 700.0
DYD1_k127_112390_20 - - - - 0.0000000000000000000000000000000005077 144.0
DYD1_k127_112390_21 - - - - 0.00000000000000000000000000325 115.0
DYD1_k127_112390_22 ribonuclease P activity K03536,K08998 GO:0000966,GO:0001682,GO:0003674,GO:0003676,GO:0003723,GO:0003824,GO:0004518,GO:0004519,GO:0004521,GO:0004526,GO:0004540,GO:0004549,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005634,GO:0005655,GO:0005730,GO:0006139,GO:0006396,GO:0006399,GO:0006725,GO:0006807,GO:0008033,GO:0008150,GO:0008152,GO:0009987,GO:0010467,GO:0016070,GO:0016787,GO:0016788,GO:0016891,GO:0016893,GO:0030677,GO:0030681,GO:0031123,GO:0031404,GO:0031974,GO:0031981,GO:0032991,GO:0033204,GO:0034414,GO:0034470,GO:0034471,GO:0034641,GO:0034660,GO:0040007,GO:0042301,GO:0042779,GO:0042780,GO:0042781,GO:0043167,GO:0043168,GO:0043170,GO:0043199,GO:0043226,GO:0043227,GO:0043228,GO:0043229,GO:0043231,GO:0043232,GO:0043233,GO:0043628,GO:0044237,GO:0044238,GO:0044422,GO:0044424,GO:0044428,GO:0044446,GO:0044452,GO:0044464,GO:0046483,GO:0070013,GO:0071704,GO:0090304,GO:0090305,GO:0090501,GO:0090502,GO:0097159,GO:0099116,GO:0140098,GO:0140101,GO:1901360,GO:1901363,GO:1901681,GO:1902494,GO:1902555,GO:1905267,GO:1905348,GO:1990904 3.1.26.5 0.00000000000000000000000175 107.0
DYD1_k127_112390_23 Could be involved in insertion of integral membrane proteins into the membrane K08998 - - 0.000000000000000000000002352 104.0
DYD1_k127_112390_24 PFAM regulatory protein, MarR - - - 0.0000000000000000004391 89.0
DYD1_k127_112390_25 Involved in a type II secretion system (T2SS, formerly general secretion pathway, GSP) for the export of proteins - - - 0.0000000000000000006621 95.0
DYD1_k127_112390_26 - - - - 0.000000000000000002348 93.0
DYD1_k127_112390_27 response regulator - - - 0.00000000000000002076 91.0
DYD1_k127_112390_28 Belongs to the bacterial ribosomal protein bL34 family K02914 GO:0003674,GO:0003735,GO:0005198,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0006412,GO:0006518,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0015934,GO:0019538,GO:0022625,GO:0022626,GO:0032991,GO:0034641,GO:0034645,GO:0043043,GO:0043170,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:0071704,GO:1901564,GO:1901566,GO:1901576,GO:1990904 - 0.00000000002958 64.0
DYD1_k127_112390_3 Glucokinase K00845 - 2.7.1.2 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002344 524.0
DYD1_k127_112390_4 Catalyzes the 2-thiolation of uridine at the wobble position (U34) of tRNA, leading to the formation of s(2)U34 K00566 - 2.8.1.13 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001133 514.0
DYD1_k127_112390_5 Exhibits a very high intrinsic GTPase hydrolysis rate. Involved in the addition of a carboxymethylaminomethyl (cmnm) group at the wobble position (U34) of certain tRNAs, forming tRNA- cmnm(5)s(2)U34 K03650 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006388 445.0
DYD1_k127_112390_6 L,D-transpeptidase catalytic domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003268 397.0
DYD1_k127_112390_7 Peptidase family M1 domain K08776 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006264 387.0
DYD1_k127_112390_8 Cellulose biosynthesis protein BcsQ K03496 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000059 360.0
DYD1_k127_112390_9 Catalyzes the reversible conversion of ribose-5- phosphate to ribulose 5-phosphate K00851,K00852,K01807 GO:0003674,GO:0003824,GO:0004751,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005975,GO:0005996,GO:0006014,GO:0006081,GO:0006098,GO:0006139,GO:0006725,GO:0006732,GO:0006733,GO:0006739,GO:0006753,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0009052,GO:0009117,GO:0009987,GO:0016853,GO:0016860,GO:0016861,GO:0019321,GO:0019362,GO:0019637,GO:0019682,GO:0019693,GO:0034641,GO:0044237,GO:0044238,GO:0044281,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0046496,GO:0051156,GO:0051186,GO:0055086,GO:0071704,GO:0072524,GO:1901135,GO:1901360,GO:1901564 2.7.1.12,2.7.1.15,5.3.1.6 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008611 323.0
DYD1_k127_1154046_0 D-xylulose 5-phosphate D-fructose 6-phosphate phosphoketolase K01621 - 4.1.2.22,4.1.2.9 0.0 1411.0
DYD1_k127_1154046_1 haloacid dehalogenase superfamily, subfamily IA, variant 3 with third motif having DD or ED K05342 - 2.4.1.64 0.0 1061.0
DYD1_k127_1154046_2 phosphonoacetaldehyde hydrolase activity K01087,K01194,K01838,K05342 GO:0000287,GO:0003674,GO:0003824,GO:0004805,GO:0005488,GO:0005575,GO:0005576,GO:0005618,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005886,GO:0005975,GO:0005984,GO:0005991,GO:0005992,GO:0006793,GO:0006796,GO:0006950,GO:0006974,GO:0008150,GO:0008152,GO:0008801,GO:0009058,GO:0009292,GO:0009294,GO:0009311,GO:0009312,GO:0009987,GO:0016020,GO:0016051,GO:0016311,GO:0016787,GO:0016788,GO:0016791,GO:0016853,GO:0016866,GO:0016868,GO:0019203,GO:0030312,GO:0033554,GO:0034637,GO:0040007,GO:0042221,GO:0042578,GO:0043167,GO:0043169,GO:0044237,GO:0044238,GO:0044249,GO:0044262,GO:0044424,GO:0044444,GO:0044464,GO:0044764,GO:0046351,GO:0046677,GO:0046872,GO:0050896,GO:0051704,GO:0051716,GO:0071704,GO:0071944,GO:1901576 2.4.1.64,3.1.3.12,3.2.1.28,5.4.2.6 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001796 323.0
DYD1_k127_1154046_3 Catalyzes the formation of acetyl phosphate from acetate and ATP. Can also catalyze the reverse reaction K00925 - 2.7.2.1 0.0000000000000002615 82.0
DYD1_k127_1154046_4 17 kDa outer membrane surface antigen - - - 0.000000000005232 70.0
DYD1_k127_1154046_5 MEDS: MEthanogen/methylotroph, DcmR Sensory domain - - - 0.000729 44.0
DYD1_k127_115808_0 PFAM Response regulator receiver domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000001096 262.0
DYD1_k127_115808_1 Histidine kinase K07683 - 2.7.13.3 0.0000000000000000000000000000000000000000000000000000000007729 226.0
DYD1_k127_115808_2 His Kinase A (phosphoacceptor) domain - - - 0.0000000000000000000000000000000000007014 160.0
DYD1_k127_115808_3 Sporulation protein YtfJ (Spore_YtfJ) - - - 0.0000000000000000000176 93.0
DYD1_k127_117855_0 Sulfatase-modifying factor enzyme 1 - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002132 445.0
DYD1_k127_117855_1 Cobalamin synthesis protein cobW C-terminal domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006305 404.0
DYD1_k127_117855_10 Protein of unknown function (DUF1097) - - - 0.0000000000000000000000000000000000000000000000008666 179.0
DYD1_k127_117855_11 COGs COG2343 conserved - - - 0.000000000000000000000000000000000000000001982 158.0
DYD1_k127_117855_12 PFAM Nitrile hydratase beta subunit - - - 0.000000000000000000000000000000000000002697 149.0
DYD1_k127_117855_13 ACT domain protein K00003,K00058,K01754,K04767 - 1.1.1.3,1.1.1.399,1.1.1.95,4.3.1.19 0.000000000000000000000000000008293 123.0
DYD1_k127_117855_14 Aminotransferase class-V K11325 - - 0.00000000000000000000000000009271 129.0
DYD1_k127_117855_16 Potassium channel K21867 GO:0003674,GO:0005215,GO:0005216,GO:0005244,GO:0005249,GO:0005261,GO:0005267,GO:0005575,GO:0005623,GO:0005886,GO:0005887,GO:0006810,GO:0006811,GO:0006812,GO:0006813,GO:0008150,GO:0008324,GO:0009987,GO:0015075,GO:0015077,GO:0015079,GO:0015267,GO:0015318,GO:0015672,GO:0016020,GO:0016021,GO:0022803,GO:0022832,GO:0022836,GO:0022838,GO:0022839,GO:0022843,GO:0022857,GO:0022890,GO:0030001,GO:0031224,GO:0031226,GO:0034220,GO:0042391,GO:0044425,GO:0044459,GO:0044464,GO:0046873,GO:0051179,GO:0051234,GO:0055085,GO:0065007,GO:0065008,GO:0071804,GO:0071805,GO:0071944,GO:0098655,GO:0098660,GO:0098662 - 0.00000000000006696 77.0
DYD1_k127_117855_17 hemerythrin HHE cation binding domain - - - 0.00000000005706 64.0
DYD1_k127_117855_19 Sulfurtransferase - - - 0.000000007106 60.0
DYD1_k127_117855_2 Predicted membrane protein (DUF2254) - GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0008150,GO:0009405,GO:0044419,GO:0044424,GO:0044444,GO:0044464,GO:0051704 - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003374 380.0
DYD1_k127_117855_20 cellulase activity - - - 0.000008955 54.0
DYD1_k127_117855_3 Methyltransferase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002345 366.0
DYD1_k127_117855_4 ABC-type glycine betaine transport system K05845 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005564 331.0
DYD1_k127_117855_5 Nitrile hydratase beta subunit K20807 - 4.2.1.84 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001601 327.0
DYD1_k127_117855_6 TIGRFAM nitrile hydratase, alpha subunit K01721 - 4.2.1.84 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006875 316.0
DYD1_k127_117855_7 PFAM Cytochrome P450 - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007652 325.0
DYD1_k127_117855_8 ABC-type proline glycine betaine transport K05847 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002781 303.0
DYD1_k127_117855_9 glycine betaine transport K05845,K05846 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000002149 269.0
DYD1_k127_1207396_0 - - - - 0.00000000000227 70.0
DYD1_k127_1207396_1 BON domain K04065 - - 0.00000000001104 68.0
DYD1_k127_1207396_2 response regulator - - - 0.0000000006386 69.0
DYD1_k127_1207396_3 RNA-binding protein K13091 GO:0005575,GO:0005622,GO:0005623,GO:0005634,GO:0005654,GO:0016604,GO:0016607,GO:0031974,GO:0031981,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0043233,GO:0044422,GO:0044424,GO:0044428,GO:0044446,GO:0044451,GO:0044464,GO:0070013 - 0.00000004942 60.0
DYD1_k127_1302687_0 silver ion transport K15726 - - 0.0 1642.0
DYD1_k127_1302687_1 Belongs to the RtcB family K14415 - 6.5.1.3 7.02e-226 707.0
DYD1_k127_1302687_10 Bacterial capsule synthesis protein PGA_cap K07282 - - 0.00000000000000000000000000000000000000000000000000000000000000000006123 233.0
DYD1_k127_1302687_11 Probable RNA and SrmB- binding site of polymerase A K00974 - 2.7.7.72 0.0000000000000000000000000000000000000000000000000000000004496 206.0
DYD1_k127_1302687_12 NTPase - - - 0.000000000000000000000000000000000000000000004623 169.0
DYD1_k127_1302687_13 Saccharopine dehydrogenase NADP binding domain K00290 - 1.5.1.7 0.00000000000000000000000000000000000841 151.0
DYD1_k127_1302687_14 Glyoxalase-like domain - - - 0.0000000000000000000000000009376 116.0
DYD1_k127_1302687_15 4Fe-4S single cluster domain K04069 - 1.97.1.4 0.000000003998 60.0
DYD1_k127_1302687_2 Evidence 3 Function proposed based on presence of conserved amino acid motif, structural feature or limited homology K07798,K15727 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001319 437.0
DYD1_k127_1302687_3 Radical SAM superfamily K04070 - 1.97.1.4 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003769 400.0
DYD1_k127_1302687_4 S-adenosylmethionine synthetase (AdoMet synthetase) K00789 - 2.5.1.6 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003061 373.0
DYD1_k127_1302687_5 Lipoprotein K04754 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000229 360.0
DYD1_k127_1302687_6 Amino acid permease K03294 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000754 338.0
DYD1_k127_1302687_7 Hydrogenase expression formation protein (HypE) K04655 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004542 316.0
DYD1_k127_1302687_8 Methyltransferase, chemotaxis proteins K00575 - 2.1.1.80 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000285 282.0
DYD1_k127_1302687_9 Catalyzes the methyl esterification of L-isoaspartyl residues in peptides and proteins that result from spontaneous decomposition of normal L-aspartyl and L-asparaginyl residues. It plays a role in the repair and or degradation of damaged proteins K00573 GO:0003674,GO:0003824,GO:0004719,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006464,GO:0006479,GO:0006807,GO:0008150,GO:0008152,GO:0008168,GO:0008171,GO:0008213,GO:0008276,GO:0008757,GO:0009987,GO:0010340,GO:0016740,GO:0016741,GO:0019538,GO:0032259,GO:0036211,GO:0043170,GO:0043412,GO:0043414,GO:0044237,GO:0044238,GO:0044260,GO:0044267,GO:0044424,GO:0044464,GO:0051998,GO:0071704,GO:0140096,GO:1901564 2.1.1.77 0.000000000000000000000000000000000000000000000000000000000000000000000005799 251.0
DYD1_k127_1303039_0 AcrB/AcrD/AcrF family K07787 - - 0.0 1560.0
DYD1_k127_1303039_1 Cation transporter/ATPase, N-terminus K01537 GO:0005575,GO:0005623,GO:0005886,GO:0016020,GO:0044464,GO:0071944 3.6.3.8 0.0 1341.0
DYD1_k127_1303039_2 Barrel-sandwich domain of CusB or HlyD membrane-fusion K07798 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001314 401.0
DYD1_k127_1303039_3 Outer membrane efflux protein - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007993 331.0
DYD1_k127_1303039_4 Belongs to the sigma-70 factor family. ECF subfamily K03088 - - 0.0000000000000000000000000000000191 135.0
DYD1_k127_1305760_0 Proton-conducting membrane transporter K12137 - - 0.0 1016.0
DYD1_k127_1305760_1 Respiratory-chain NADH dehydrogenase, 30 Kd subunit - - - 1.291e-288 891.0
DYD1_k127_1305760_10 Part of the MsrPQ system that repairs oxidized periplasmic proteins containing methionine sulfoxide residues (Met-O), using respiratory chain electrons. Thus protects these proteins from oxidative-stress damage caused by reactive species of oxygen and chlorine generated by the host defense mechanisms. MsrPQ is essential for the maintenance of envelope integrity under bleach stress, rescuing a wide series of structurally unrelated periplasmic proteins from methionine oxidation. The catalytic subunit MsrP is non-stereospecific, being able to reduce both (R-) and (S-) diastereoisomers of methionine sulfoxide K07147 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000336 458.0
DYD1_k127_1305760_11 COG0491 Zn-dependent - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001339 451.0
DYD1_k127_1305760_12 ABC transporter K02065 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002004 414.0
DYD1_k127_1305760_13 Cytochrome C oxidase, cbb3-type, subunit III K19713 - 1.8.2.2 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000387 383.0
DYD1_k127_1305760_14 ABC-type transport system involved in resistance to organic solvents, periplasmic component K02067 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001033 384.0
DYD1_k127_1305760_15 Pyruvate ferredoxin/flavodoxin oxidoreductase K00172 - 1.2.7.1 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009487 364.0
DYD1_k127_1305760_16 Proton-conducting membrane transporter K12141 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000468 370.0
DYD1_k127_1305760_17 Hydrogenase 4 membrane K12140 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006279 331.0
DYD1_k127_1305760_18 NADH ubiquinone oxidoreductase, 20 Kd subunit - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000003414 287.0
DYD1_k127_1305760_19 Evidence 2a Function of homologous gene experimentally demonstrated in an other organism K02040 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000009811 287.0
DYD1_k127_1305760_2 Cytochrome c K12263 - - 1.123e-250 779.0
DYD1_k127_1305760_21 Evidence 2a Function of homologous gene experimentally demonstrated in an other organism - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000196 247.0
DYD1_k127_1305760_22 response to oxidative stress K04063 - - 0.00000000000000000000000000000000000000000000000000000000000000000004175 233.0
DYD1_k127_1305760_23 cellular manganese ion homeostasis - - - 0.000000000000000000000000000000000000000000000000000000000000000001576 229.0
DYD1_k127_1305760_24 Part of a sulfur-relay system required for 2-thiolation of 5-methylaminomethyl-2-thiouridine (mnm(5)s(2)U) at tRNA wobble positions. Accepts sulfur from TusA and transfers it in turn to TusE K06039,K07235 - - 0.0000000000000000000000000000000000000000000000000000000000000439 215.0
DYD1_k127_1305760_25 Cytochrome C oxidase, cbb3-type, subunit III - - - 0.0000000000000000000000000000000000000000000000000000000000008046 215.0
DYD1_k127_1305760_26 ABC-type transport auxiliary lipoprotein component K18480 - - 0.000000000000000000000000000000000000000000000000000000002617 207.0
DYD1_k127_1305760_27 OsmC-like protein K09136 - - 0.0000000000000000000000000000000000000000000000000001247 189.0
DYD1_k127_1305760_28 hemerythrin HHE cation binding domain - - - 0.000000000000000000000000000000000000000000000000003504 184.0
DYD1_k127_1305760_29 IMP dehydrogenase activity K09137 - - 0.00000000000000000000000000000000000000000000106 169.0
DYD1_k127_1305760_3 phosphorelay signal transduction system K02481 - - 7.079e-245 762.0
DYD1_k127_1305760_30 ATP-independent chaperone mediated protein folding - - - 0.00000000000000000000000000000000000000005423 160.0
DYD1_k127_1305760_32 Copper/zinc superoxide dismutase (SODC) K04565 - 1.15.1.1 0.0000000000000000000000000000000002922 139.0
DYD1_k127_1305760_33 Belongs to the ompA family K03640 - - 0.000000000000000000000000000000001153 138.0
DYD1_k127_1305760_34 Cytochrome c K12263 - - 0.00000000000000000000000000007835 119.0
DYD1_k127_1305760_36 Cytochrome c K00406 - - 0.000000000000000000000001999 111.0
DYD1_k127_1305760_37 Cytochrome c K12263 - - 0.00000000000000000000003471 103.0
DYD1_k127_1305760_38 Evidence 4 Homologs of previously reported genes of - - - 0.000000000000000000004283 96.0
DYD1_k127_1305760_39 - - - - 0.000000000000000671 87.0
DYD1_k127_1305760_4 phosphorelay sensor kinase activity K02668,K10942 - 2.7.13.3 2.559e-231 725.0
DYD1_k127_1305760_40 protein secretion by the type I secretion system K02021 - - 0.0000000000001281 74.0
DYD1_k127_1305760_41 Prokaryotic dksA traR C4-type zinc finger - - - 0.000000001619 63.0
DYD1_k127_1305760_43 Pyruvate flavodoxin ferredoxin oxidoreductase domain protein K00174 - 1.2.7.11,1.2.7.3 0.000000005015 69.0
DYD1_k127_1305760_44 PFAM Cupin 2, conserved barrel domain protein - - - 0.000000006735 63.0
DYD1_k127_1305760_46 ZIP Zinc transporter K16267 - - 0.0004295 47.0
DYD1_k127_1305760_5 Pyruvate:ferredoxin oxidoreductase core domain II K00169 - 1.2.7.1 9.081e-214 669.0
DYD1_k127_1305760_6 Belongs to the TPP enzyme family K01652 - 2.2.1.6 3.492e-200 637.0
DYD1_k127_1305760_7 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain K00170 - 1.2.7.1 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006955 505.0
DYD1_k127_1305760_8 NADH dehydrogenase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003385 474.0
DYD1_k127_1305760_9 PFAM blue (type 1) copper domain protein - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000696 459.0
DYD1_k127_1326764_0 Methyladenine glycosylase K01246 - 3.2.2.20 0.0000000000000000000000000000000000000000000000000000000000000000000000000144 255.0
DYD1_k127_1326764_1 Has an important function as a repair enzyme for proteins that have been inactivated by oxidation. Catalyzes the reversible oxidation-reduction of methionine sulfoxide in proteins to methionine K07304 - 1.8.4.11 0.00000000000000000000000000000000000000000000000000000003117 198.0
DYD1_k127_1326764_2 Rhomboid family - - - 0.000000000000000000000000000000000000000002623 166.0
DYD1_k127_1326764_3 Part of the tripartite ATP-independent periplasmic (TRAP) transport system - - - 0.0000000000000000000000000000000003239 134.0
DYD1_k127_1326764_4 PFAM Methylated-DNA- protein -cysteine S-methyltransferase DNA binding K07443 - - 0.0000000000000000000000000000002815 126.0
DYD1_k127_1380183_0 PEP-utilising enzyme, mobile domain K01007 - 2.7.9.2 6.41e-305 957.0
DYD1_k127_1380183_1 Aminotransferase class I and II K10206 - 2.6.1.83 4.746e-233 724.0
DYD1_k127_1380183_10 Protein conserved in bacteria - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001512 512.0
DYD1_k127_1380183_11 Reversibly catalyzes the transfer of the carbamoyl group from carbamoyl phosphate (CP) to the N(epsilon) atom of ornithine (ORN) to produce L-citrulline K00611 - 2.1.3.3 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001376 468.0
DYD1_k127_1380183_12 Catalyzes the conversion of 4-hydroxy- tetrahydrodipicolinate (HTPA) to tetrahydrodipicolinate K00215 - 1.17.1.8 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001074 453.0
DYD1_k127_1380183_13 Catalyzes the condensation of (S)-aspartate-beta- semialdehyde (S)-ASA and pyruvate to 4-hydroxy- tetrahydrodipicolinate (HTPA) K01714 - 4.3.3.7 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003794 450.0
DYD1_k127_1380183_14 MOFRL family K11529 - 2.7.1.165 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008813 460.0
DYD1_k127_1380183_15 Elongator protein 3, MiaB family, Radical SAM - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007378 458.0
DYD1_k127_1380183_16 Belongs to the 'phage' integrase family - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002697 415.0
DYD1_k127_1380183_17 Transaldolase is important for the balance of metabolites in the pentose-phosphate pathway K00616 - 2.2.1.2 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002941 382.0
DYD1_k127_1380183_18 deaminated base DNA N-glycosylase activity K21929 GO:0003674,GO:0003824,GO:0004844,GO:0005488,GO:0006139,GO:0006259,GO:0006281,GO:0006284,GO:0006725,GO:0006807,GO:0006950,GO:0006974,GO:0008150,GO:0008152,GO:0009987,GO:0016787,GO:0016798,GO:0016799,GO:0019104,GO:0033554,GO:0033958,GO:0034641,GO:0043170,GO:0044237,GO:0044238,GO:0044260,GO:0046483,GO:0048037,GO:0050896,GO:0051536,GO:0051539,GO:0051540,GO:0051716,GO:0071704,GO:0090304,GO:0097506,GO:0140097,GO:1901360 3.2.2.27 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002328 367.0
DYD1_k127_1380183_19 Catalyzes the interconversion of 2-phosphoglycerate and 3-phosphoglycerate K01834 - 5.4.2.11 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004243 359.0
DYD1_k127_1380183_2 Belongs to the argininosuccinate synthase family. Type 1 subfamily K01940 - 6.3.4.5 4.882e-220 687.0
DYD1_k127_1380183_20 Catalyzes the condensation of pantoate with beta-alanine in an ATP-dependent reaction via a pantoyl-adenylate intermediate K01918 GO:0003674,GO:0003824,GO:0004592,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006082,GO:0006520,GO:0006573,GO:0006575,GO:0006732,GO:0006766,GO:0006767,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009081,GO:0009108,GO:0009110,GO:0009987,GO:0015939,GO:0015940,GO:0016053,GO:0016874,GO:0016879,GO:0016881,GO:0019752,GO:0032787,GO:0033317,GO:0034641,GO:0042364,GO:0042398,GO:0043436,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0044283,GO:0044424,GO:0044444,GO:0044464,GO:0046394,GO:0051186,GO:0051188,GO:0071704,GO:0072330,GO:1901564,GO:1901566,GO:1901576,GO:1901605 6.3.2.1 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003251 352.0
DYD1_k127_1380183_21 methyltransferase K00570 - 2.1.1.17,2.1.1.71 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000312 340.0
DYD1_k127_1380183_22 Cytidine and deoxycytidylate deaminase zinc-binding region - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000009561 291.0
DYD1_k127_1380183_24 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase (HPPK) K00950 - 2.7.6.3 0.0000000000000000000000000000000000000000000000000000000000000000000000000001463 260.0
DYD1_k127_1380183_25 Appr-1'-p processing enzyme - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000002448 250.0
DYD1_k127_1380183_26 cell adhesion K02650 - - 0.000000000000000000000000000000000000000000000000000000000000007301 223.0
DYD1_k127_1380183_29 Protein conserved in bacteria K16785 - - 0.0000000000000000000000000000000000000000000000000001781 189.0
DYD1_k127_1380183_3 Specifically catalyzes the decarboxylation of meso- diaminopimelate (meso-DAP) to L-lysine K01586 - 4.1.1.20 9.242e-211 661.0
DYD1_k127_1380183_30 Belongs to the low molecular weight phosphotyrosine protein phosphatase family K01104,K03741 - 1.20.4.1,3.1.3.48 0.000000000000000000000000000000000000000000000000001172 187.0
DYD1_k127_1380183_31 Plasmid stabilization system K19093 GO:0008150,GO:0040008,GO:0045926,GO:0048519,GO:0050789,GO:0065007 - 0.000000000000000000000000000000000000000000000003023 175.0
DYD1_k127_1380183_33 glutamine amidotransferase K01951 - 6.3.5.2 0.00000000000000000000000000000000000000004271 160.0
DYD1_k127_1380183_34 Transposase - - - 0.00000000000000000000000000000000000001009 149.0
DYD1_k127_1380183_36 Bacterial PH domain - - - 0.0000000000000000000000000000002114 130.0
DYD1_k127_1380183_38 Putative addiction module component - - - 0.00000000000000000000000000001202 118.0
DYD1_k127_1380183_4 Aminotransferase class-III K00821 - 2.6.1.11,2.6.1.17 4.572e-198 623.0
DYD1_k127_1380183_40 Appr-1'-p processing enzyme - - - 0.0000000000000000000002368 98.0
DYD1_k127_1380183_41 monooxygenase activity K00688,K15760,K16157,K16242,K18223,K22353,K22357 GO:0003674,GO:0003824,GO:0004497,GO:0005575,GO:0008150,GO:0008152,GO:0009987,GO:0015049,GO:0015050,GO:0015947,GO:0016491,GO:0016705,GO:0016709,GO:0032991,GO:0043446,GO:0044237,GO:0055114,GO:0071704,GO:1902494 1.14.13.227,1.14.13.236,1.14.13.25,1.14.13.69,2.4.1.1 0.0000000000000000001845 90.0
DYD1_k127_1380183_43 Alcohol dehydrogenase GroES-like domain K00344 - 1.6.5.5 0.00001756 47.0
DYD1_k127_1380183_5 Alcohol dehydrogenase GroES-like domain K00344 - 1.6.5.5 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008989 562.0
DYD1_k127_1380183_6 RmuC family K09760 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003005 566.0
DYD1_k127_1380183_7 Belongs to the D-alanine--D-alanine ligase family K01921,K01955 - 6.3.2.4,6.3.5.5 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002918 542.0
DYD1_k127_1380183_8 Lysin motif - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001074 518.0
DYD1_k127_1380183_9 TIGRFAM argininosuccinate lyase K01755 GO:0003674,GO:0003824,GO:0004056,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006082,GO:0006520,GO:0006525,GO:0006526,GO:0006591,GO:0006807,GO:0008150,GO:0008152,GO:0008652,GO:0009058,GO:0009064,GO:0009084,GO:0009987,GO:0016053,GO:0016829,GO:0016840,GO:0016842,GO:0019752,GO:0042450,GO:0043436,GO:0044237,GO:0044238,GO:0044249,GO:0044281,GO:0044283,GO:0044424,GO:0044464,GO:0046394,GO:0071704,GO:1901564,GO:1901566,GO:1901576,GO:1901605,GO:1901607 4.3.2.1 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002637 524.0
DYD1_k127_1441927_0 SnoaL-like domain K06893 - - 0.000000000000000000000000005609 117.0
DYD1_k127_1441927_1 ubiE/COQ5 methyltransferase family - - - 0.0000000005706 65.0
DYD1_k127_1471525_0 Catalyzes the oxidation of L-aspartate to iminoaspartate K00244,K00278 GO:0000166,GO:0001716,GO:0003674,GO:0003824,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006082,GO:0006139,GO:0006520,GO:0006531,GO:0006725,GO:0006732,GO:0006733,GO:0006734,GO:0006753,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0008734,GO:0009058,GO:0009066,GO:0009108,GO:0009117,GO:0009165,GO:0009435,GO:0009987,GO:0015922,GO:0016491,GO:0016638,GO:0016641,GO:0018130,GO:0019355,GO:0019359,GO:0019362,GO:0019363,GO:0019438,GO:0019637,GO:0019674,GO:0019752,GO:0034627,GO:0034628,GO:0034641,GO:0034654,GO:0036094,GO:0043167,GO:0043168,GO:0043436,GO:0043648,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0044318,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0046496,GO:0048037,GO:0050660,GO:0050662,GO:0051186,GO:0051188,GO:0055086,GO:0055114,GO:0071704,GO:0072524,GO:0072525,GO:0090407,GO:0097159,GO:1901265,GO:1901293,GO:1901360,GO:1901362,GO:1901363,GO:1901564,GO:1901566,GO:1901576,GO:1901605 1.3.5.4,1.4.3.16 2.059e-294 910.0
DYD1_k127_1471525_1 PFAM Alcohol dehydrogenase, zinc-binding K00001 - 1.1.1.1 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001829 559.0
DYD1_k127_1471525_10 Glyoxalase-like domain - - - 0.00000000000001212 78.0
DYD1_k127_1471525_12 glycosyl transferase, family 39 - - - 0.00000007681 65.0
DYD1_k127_1471525_13 PFAM transposase IS204 IS1001 IS1096 IS1165 family protein K07485 - - 0.0007747 43.0
DYD1_k127_1471525_2 Catalyzes the condensation of iminoaspartate with dihydroxyacetone phosphate to form quinolinate K03517 GO:0003674,GO:0003824,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006082,GO:0006139,GO:0006520,GO:0006531,GO:0006725,GO:0006732,GO:0006733,GO:0006734,GO:0006753,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0008987,GO:0009058,GO:0009066,GO:0009108,GO:0009117,GO:0009165,GO:0009435,GO:0009987,GO:0016053,GO:0017144,GO:0018130,GO:0019355,GO:0019359,GO:0019362,GO:0019363,GO:0019438,GO:0019637,GO:0019674,GO:0019752,GO:0019805,GO:0034627,GO:0034628,GO:0034641,GO:0034654,GO:0043436,GO:0043648,GO:0043650,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0044283,GO:0044424,GO:0044444,GO:0044464,GO:0046394,GO:0046483,GO:0046496,GO:0046874,GO:0048037,GO:0051186,GO:0051188,GO:0051536,GO:0051539,GO:0051540,GO:0055086,GO:0071704,GO:0072524,GO:0072525,GO:0090407,GO:1901293,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576,GO:1901605 2.5.1.72 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001839 547.0
DYD1_k127_1471525_3 Belongs to the NadC ModD family K00767,K03813 - 2.4.2.19 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003901 383.0
DYD1_k127_1471525_4 Glycosyl transferase, family 2 - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008402 349.0
DYD1_k127_1471525_5 Protein conserved in bacteria K09986 - - 0.0000000000000000000007952 100.0
DYD1_k127_1471525_6 Bacterial transcriptional repressor C-terminal K16137 - - 0.00000000000000000001543 94.0
DYD1_k127_1471525_7 Protein conserved in bacteria K09986 - - 0.00000000000000005932 85.0
DYD1_k127_1471525_9 Glyoxalase-like domain - - - 0.000000000000005775 81.0
DYD1_k127_1474556_0 Catalyzes the attachment of proline to tRNA(Pro) in a two-step reaction proline is first activated by ATP to form Pro- AMP and then transferred to the acceptor end of tRNA(Pro). As ProRS can inadvertently accommodate and process non-cognate amino acids such as alanine and cysteine, to avoid such errors it has two additional distinct editing activities against alanine. One activity is designated as 'pretransfer' editing and involves the tRNA(Pro)-independent hydrolysis of activated Ala-AMP. The other activity is designated 'posttransfer' editing and involves deacylation of mischarged Ala-tRNA(Pro). The misacylated Cys- tRNA(Pro) is not edited by ProRS K01881 - 6.1.1.15 5.742e-272 846.0
DYD1_k127_1474556_1 Putative modulator of DNA gyrase K03568 - - 1.154e-253 788.0
DYD1_k127_1474556_11 Dienelactone hydrolase family K01061 - 3.1.1.45 0.000000000000000000000000000000000000000000000000000002186 199.0
DYD1_k127_1474556_12 Type II/IV secretion system protein K02454,K02652 - - 0.000000000000000000000000000000000002357 141.0
DYD1_k127_1474556_13 Periplasmic binding protein K02016 - - 0.00000000000001466 76.0
DYD1_k127_1474556_2 Putative modulator of DNA gyrase K03592 - - 1.699e-198 628.0
DYD1_k127_1474556_3 Catalyzes the NADP-dependent rearrangement and reduction of 1-deoxy-D-xylulose-5-phosphate (DXP) to 2-C-methyl-D-erythritol 4-phosphate (MEP) K00099 GO:0000166,GO:0003674,GO:0003824,GO:0005488,GO:0006081,GO:0006082,GO:0006090,GO:0006629,GO:0006644,GO:0006720,GO:0006721,GO:0006793,GO:0006796,GO:0008150,GO:0008152,GO:0008299,GO:0008610,GO:0008654,GO:0009058,GO:0009240,GO:0009987,GO:0016114,GO:0016491,GO:0016614,GO:0016616,GO:0019288,GO:0019637,GO:0019682,GO:0019752,GO:0030145,GO:0030604,GO:0032787,GO:0036094,GO:0043167,GO:0043168,GO:0043169,GO:0043436,GO:0044237,GO:0044238,GO:0044249,GO:0044255,GO:0044281,GO:0046490,GO:0046872,GO:0046914,GO:0048037,GO:0050661,GO:0050662,GO:0051483,GO:0051484,GO:0055114,GO:0070402,GO:0071704,GO:0090407,GO:0097159,GO:1901135,GO:1901265,GO:1901363,GO:1901576 1.1.1.267 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006065 600.0
DYD1_k127_1474556_4 Peptidase family M50 K11749 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005124 557.0
DYD1_k127_1474556_5 Squalene/phytoene synthase K02291 - 2.5.1.32,2.5.1.99 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001004 411.0
DYD1_k127_1474556_6 Catalyzes the condensation of isopentenyl diphosphate (IPP) with allylic pyrophosphates generating different type of terpenoids K00806 - 2.5.1.31 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005975 395.0
DYD1_k127_1474556_7 Uracil DNA glycosylase superfamily K21929 - 3.2.2.27 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002933 353.0
DYD1_k127_1474556_8 Flavin containing amine oxidoreductase K21677 - 1.17.8.1 0.000000000000000000000000000000000000000000000000000000000000000000000003655 261.0
DYD1_k127_1474556_9 Cytidylyltransferase family K00981 - 2.7.7.41 0.00000000000000000000000000000000000000000000000000000000000007885 224.0
DYD1_k127_1496728_0 Putative cyclase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000004727 298.0
DYD1_k127_1496728_1 Bacterial extracellular solute-binding proteins, family 3 K02030 - - 0.00000000000000000000000000000000000000000000000001452 189.0
DYD1_k127_149793_0 Catalyzes the specific phosphorylation of 1,6-anhydro-N- acetylmuramic acid (anhMurNAc) with the simultaneous cleavage of the 1,6-anhydro ring, generating MurNAc-6-P. Is required for the utilization of anhMurNAc either imported from the medium or derived from its own cell wall murein, and thus plays a role in cell wall recycling K09001 - 2.7.1.170 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000375 484.0
DYD1_k127_149793_1 Involved in the biosynthesis of a nickel-pincer cofactor ((SCS)Ni(II) pincer complex). Binds Ni(2 ), and functions in nickel delivery to pyridinium-3,5-bisthiocarboxylic acid mononucleotide (P2TMN), to form the mature cofactor. Is thus probably required for the activation of nickel-pincer cofactor- dependent enzymes K09121 - 4.99.1.12 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001155 472.0
DYD1_k127_149793_10 Zinc-uptake complex component A periplasmic K09815,K09818 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005413 352.0
DYD1_k127_149793_11 (AIR) carboxylase K06898 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005033 338.0
DYD1_k127_149793_12 Specifically dimethylates two adjacent adenosines (A1518 and A1519) in the loop of a conserved hairpin near the 3'-end of 16S rRNA in the 30S particle. May play a critical role in biogenesis of 30S subunits K02528 - 2.1.1.182 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000003201 293.0
DYD1_k127_149793_13 protein trimerization - - - 0.00000000000000000000000000000000000000000000000000000000001401 210.0
DYD1_k127_149793_14 Histidine kinase K03406 - - 0.000000000000000000000000000000000000000000000000000000003653 207.0
DYD1_k127_149793_15 acetyltransferase - - - 0.000000000000000000000000000000000000000000000000000001566 194.0
DYD1_k127_149793_17 Acetyltransferase (GNAT) family - - - 0.0000000000000000000000000000000000000000000003681 174.0
DYD1_k127_149793_2 Responsible for synthesis of pseudouridine from uracil K06180 - 5.4.99.23 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007347 458.0
DYD1_k127_149793_3 Pyridoxal phosphate biosynthetic protein PdxA K00097,K22024 - 1.1.1.262,1.1.1.408,1.1.1.409 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001204 459.0
DYD1_k127_149793_4 Sodium/calcium exchanger protein K07301 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001342 451.0
DYD1_k127_149793_5 AAA domain, putative AbiEii toxin, Type IV TA system K09817,K09820 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003711 425.0
DYD1_k127_149793_6 diguanylate cyclase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005567 415.0
DYD1_k127_149793_7 NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus K00057 - 1.1.1.94 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004129 407.0
DYD1_k127_149793_8 pectinesterase activity - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002008 398.0
DYD1_k127_149793_9 ABC 3 transport family K09816 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002604 394.0
DYD1_k127_154065_0 Diguanylate cyclase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000003415 265.0
DYD1_k127_154065_1 TIGRFAM succinate dehydrogenase (or fumarate reductase) cytochrome b subunit, b558 family K00241 - - 0.000000000000000000000000000003459 125.0
DYD1_k127_154065_2 MobA-like NTP transferase domain - - - 0.00000000000000000009651 89.0
DYD1_k127_154065_3 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase - - - 0.0000000000004221 73.0
DYD1_k127_1555895_0 Cation transporter/ATPase, N-terminus - - - 0.0 1277.0
DYD1_k127_1555895_1 AAA domain - - - 0.0 1255.0
DYD1_k127_1555895_10 Catalyzes the phosphorylation of D-fructose 6-phosphate, the first committing step of glycolysis. Uses inorganic phosphate (PPi) as phosphoryl donor instead of ATP like common ATP-dependent phosphofructokinases (ATP-PFKs), which renders the reaction reversible, and can thus function both in glycolysis and gluconeogenesis. Consistently, PPi-PFK can replace the enzymes of both the forward (ATP-PFK) and reverse (fructose-bisphosphatase (FBPase)) reactions K21071 - 2.7.1.11,2.7.1.90 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008244 609.0
DYD1_k127_1555895_11 MacB-like periplasmic core domain K02004 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002666 598.0
DYD1_k127_1555895_12 Catalyzes the synthesis of beta-nicotinate D- ribonucleotide from nicotinate and 5-phospho-D-ribose 1-phosphate at the expense of ATP K00763 GO:0001666,GO:0003674,GO:0003824,GO:0004516,GO:0005575,GO:0005623,GO:0005886,GO:0006139,GO:0006725,GO:0006732,GO:0006733,GO:0006753,GO:0006793,GO:0006796,GO:0006807,GO:0006950,GO:0008150,GO:0008152,GO:0009058,GO:0009108,GO:0009117,GO:0009165,GO:0009435,GO:0009605,GO:0009607,GO:0009628,GO:0009987,GO:0016020,GO:0016740,GO:0016757,GO:0016763,GO:0016874,GO:0016879,GO:0018130,GO:0019359,GO:0019362,GO:0019363,GO:0019365,GO:0019438,GO:0019637,GO:0019674,GO:0034355,GO:0034641,GO:0034654,GO:0036293,GO:0043094,GO:0043173,GO:0043207,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0044403,GO:0044419,GO:0044464,GO:0046483,GO:0046496,GO:0047280,GO:0050896,GO:0051186,GO:0051188,GO:0051701,GO:0051704,GO:0051707,GO:0055086,GO:0070482,GO:0071704,GO:0071944,GO:0072524,GO:0072525,GO:0075136,GO:0090407,GO:1901293,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576 6.3.4.21 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002053 592.0
DYD1_k127_1555895_13 Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family K02005 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006622 542.0
DYD1_k127_1555895_14 very-long-chain-acyl-CoA dehydrogenase activity - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003905 530.0
DYD1_k127_1555895_15 Evidence 3 Function proposed based on presence of conserved amino acid motif, structural feature or limited homology K07497 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000393 464.0
DYD1_k127_1555895_16 ) H( ) antiporter that extrudes sodium in exchange for external protons K03313 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002381 470.0
DYD1_k127_1555895_18 Pentapeptide repeats (9 copies) - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000356 428.0
DYD1_k127_1555895_19 PhoQ Sensor - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005262 416.0
DYD1_k127_1555895_2 Penicillin-binding protein OB-like domain K05366 - 2.4.1.129,3.4.16.4 0.0 1122.0
DYD1_k127_1555895_20 AMP binding - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002058 389.0
DYD1_k127_1555895_21 PFAM Integrase catalytic region - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009247 370.0
DYD1_k127_1555895_22 6-pyruvoyl tetrahydropterin synthase K01737 - 4.1.2.50,4.2.3.12 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005659 332.0
DYD1_k127_1555895_23 signal-transduction protein containing cAMP-binding and CBS domains K10716 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001532 320.0
DYD1_k127_1555895_24 ErfK ybiS ycfS ynhG family protein - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006677 319.0
DYD1_k127_1555895_25 AMP binding - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000553 316.0
DYD1_k127_1555895_26 AMP binding - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002464 308.0
DYD1_k127_1555895_27 PFAM sigma-54 factor interaction domain-containing protein K02584 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003048 310.0
DYD1_k127_1555895_28 AhpC/TSA family - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000001199 298.0
DYD1_k127_1555895_29 thiolester hydrolase activity K07100 GO:0005575,GO:0005618,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0030312,GO:0044424,GO:0044444,GO:0044464,GO:0071944 - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000001227 298.0
DYD1_k127_1555895_3 Elongation factor G C-terminus K06207 - - 0.0 1044.0
DYD1_k127_1555895_30 AMP binding - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000008994 299.0
DYD1_k127_1555895_31 Rubrerythrin - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000001541 284.0
DYD1_k127_1555895_32 Belongs to the universal stress protein A family - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000284 293.0
DYD1_k127_1555895_33 Acetyltransferase (GNAT) domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000001094 282.0
DYD1_k127_1555895_34 Helix-hairpin-helix domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000008451 278.0
DYD1_k127_1555895_35 DnaJ molecular chaperone homology domain K04082 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000002251 278.0
DYD1_k127_1555895_36 ABC transporter substrate binding protein K01989 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000147 273.0
DYD1_k127_1555895_37 Protein of unknown function (DUF3501) - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000001017 261.0
DYD1_k127_1555895_38 Transcriptional regulator - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000009002 253.0
DYD1_k127_1555895_39 regulation of translation K03704,K05809 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000198 254.0
DYD1_k127_1555895_4 Hsp70 protein K04043,K04044 - - 0.0 1015.0
DYD1_k127_1555895_40 2Fe-2S iron-sulfur cluster binding domain K04755 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000005304 250.0
DYD1_k127_1555895_41 His Kinase A (phosphoacceptor) domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000004274 259.0
DYD1_k127_1555895_42 A scaffold on which IscS assembles Fe-S clusters. It is likely that Fe-S cluster coordination is flexible as the role of this complex is to build and then hand off Fe-S clusters K04488 - - 0.00000000000000000000000000000000000000000000000000000000000000000000008992 241.0
DYD1_k127_1555895_43 adenylylsulfate kinase activity K00860,K00955 - 2.7.1.25,2.7.7.4 0.0000000000000000000000000000000000000000000000000000000000000000000006539 240.0
DYD1_k127_1555895_44 Isochorismatase family K08281,K12132 GO:0003674,GO:0003824,GO:0005488,GO:0005506,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006139,GO:0006725,GO:0006732,GO:0006733,GO:0006753,GO:0006766,GO:0006767,GO:0006769,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0008198,GO:0008936,GO:0009058,GO:0009108,GO:0009117,GO:0009165,GO:0009820,GO:0009987,GO:0016787,GO:0016810,GO:0016811,GO:0017144,GO:0018130,GO:0019362,GO:0019363,GO:0019365,GO:0019438,GO:0019637,GO:0030145,GO:0034641,GO:0034654,GO:0043094,GO:0043167,GO:0043169,GO:0043173,GO:0043603,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0044424,GO:0044464,GO:0046483,GO:0046872,GO:0046914,GO:0051186,GO:0051188,GO:0055086,GO:0071704,GO:0072524,GO:0072525,GO:0090407,GO:1901293,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576 2.7.11.1,3.5.1.19 0.000000000000000000000000000000000000000000000000000000000000000000001079 245.0
DYD1_k127_1555895_46 nitric oxide dioxygenase activity - - - 0.0000000000000000000000000000000000000000000000000000000000000000003138 237.0
DYD1_k127_1555895_47 IMP dehydrogenase activity K07182 - - 0.000000000000000000000000000000000000000000000000000000000001162 212.0
DYD1_k127_1555895_48 Iron-sulphur cluster biosynthesis K13628 - - 0.000000000000000000000000000000000000000000000000000000000002005 210.0
DYD1_k127_1555895_49 cell redox homeostasis K03671,K03672 - 1.8.1.8 0.00000000000000000000000000000000000000000000000000000002784 198.0
DYD1_k127_1555895_5 Catalyzes the attachment of glutamate to tRNA(Glu) in a two-step reaction glutamate is first activated by ATP to form Glu-AMP and then transferred to the acceptor end of tRNA(Glu) K01885 - 6.1.1.17 8.906e-248 776.0
DYD1_k127_1555895_50 Divalent cation transporter K06213 - - 0.0000000000000000000000000000000000000000000000000003069 197.0
DYD1_k127_1555895_51 Universal stress protein family - - - 0.0000000000000000000000000000000000000000000000000008463 188.0
DYD1_k127_1555895_52 Evidence 3 Function proposed based on presence of conserved amino acid motif, structural feature or limited homology K12263 - - 0.00000000000000000000000000000000000000000000004537 173.0
DYD1_k127_1555895_53 transposase activity K07483,K07497 - - 0.00000000000000000000000000000000000000000001639 164.0
DYD1_k127_1555895_54 PFAM blue (type 1) copper domain protein K00368 GO:0005575,GO:0005623,GO:0042597,GO:0044464 1.7.2.1 0.0000000000000000000000000000000000000000002937 162.0
DYD1_k127_1555895_57 IMP dehydrogenase activity K07182 - - 0.00000000000000000000000000000000001222 141.0
DYD1_k127_1555895_58 PhoQ Sensor - - - 0.0000000000000000000000000000000004833 134.0
DYD1_k127_1555895_59 Iron-sulphur cluster assembly - - - 0.0000000000000000000000000000000007703 130.0
DYD1_k127_1555895_6 TonB-dependent receptor K02014 - - 3.258e-230 731.0
DYD1_k127_1555895_61 AMP binding - - - 0.000000000000000000000001161 114.0
DYD1_k127_1555895_62 PFAM transposase IS3 IS911 family protein - - - 0.000000000000000000000003974 106.0
DYD1_k127_1555895_64 phosphorelay signal transduction system - - - 0.00000000000000000000009482 102.0
DYD1_k127_1555895_65 Diguanylate cyclase - - - 0.0000000000000000000001068 113.0
DYD1_k127_1555895_66 phosphorelay signal transduction system - - - 0.0000000000000000000009242 104.0
DYD1_k127_1555895_67 - - - - 0.000000004625 67.0
DYD1_k127_1555895_7 fructose-bisphosphate aldolase activity K01622 - 3.1.3.11,4.1.2.13 9.045e-230 715.0
DYD1_k127_1555895_8 Master enzyme that delivers sulfur to a number of partners involved in Fe-S cluster assembly, tRNA modification or cofactor biosynthesis. Catalyzes the removal of elemental sulfur atoms from cysteine to produce alanine. Functions as a sulfur delivery protein for Fe-S cluster synthesis onto IscU, an Fe-S scaffold assembly protein, as well as other S acceptor proteins K04487 - 2.8.1.7 5.858e-225 704.0
DYD1_k127_1555895_9 4 iron, 4 sulfur cluster binding K00113,K00176,K05524,K13795,K13796 GO:0003674,GO:0005488,GO:0005575,GO:0005623,GO:0005886,GO:0006091,GO:0008150,GO:0008152,GO:0009061,GO:0009987,GO:0015980,GO:0016020,GO:0022900,GO:0043167,GO:0043169,GO:0044237,GO:0044464,GO:0045333,GO:0046872,GO:0048037,GO:0051536,GO:0051540,GO:0055114,GO:0071944 1.1.5.3,1.2.7.3 5.054e-200 630.0
DYD1_k127_1613066_0 Part of the ABC transporter complex PstSACB involved in phosphate import K02040 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001145 339.0
DYD1_k127_1613066_1 Catalyzes the phosphorylation of the 3'-hydroxyl group of dephosphocoenzyme A to form coenzyme A K00859,K01734 - 2.7.1.24,4.2.3.3 0.00000000000000000000000000000000000001464 151.0
DYD1_k127_1613066_2 His Kinase A (phosphoacceptor) domain K02484,K07636,K07768 - 2.7.13.3 0.000000000000009309 74.0
DYD1_k127_1654082_0 Integrase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000004208 258.0
DYD1_k127_1654082_1 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain - - - 0.00000000000000000000000000000000000000000000001745 177.0
DYD1_k127_1654082_10 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain - - - 0.0000000000006622 77.0
DYD1_k127_1654082_2 Integrase - - - 0.00000000000000000000000000000000000000000000001752 173.0
DYD1_k127_1654082_3 PFAM Response regulator receiver domain - - - 0.00000000000000000000000000000000001744 140.0
DYD1_k127_1654082_4 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain - - - 0.0000000000000000000000000000000531 128.0
DYD1_k127_1654082_5 IstB domain protein ATP-binding protein - - - 0.000000000000000000000000000005283 121.0
DYD1_k127_1654082_6 Polymer-forming cytoskeletal - - - 0.0000000000000000000000002827 113.0
DYD1_k127_1654082_7 WD40 domain protein beta Propeller K12132 - 2.7.11.1 0.000000000000000000005986 99.0
DYD1_k127_1654082_8 IstB domain protein ATP-binding protein - - - 0.0000000000000000006966 91.0
DYD1_k127_1721932_0 involved in the assembly of lipopolysaccharide (LPS) at the surface of the outer membrane K04744 - - 0.0 1088.0
DYD1_k127_1721932_1 Bacterial regulatory protein, Fis family K02481,K07713,K07714 - - 1.331e-249 776.0
DYD1_k127_1721932_11 Catalyzes the cyclization of GTP to (8S)-3',8-cyclo-7,8- dihydroguanosine 5'-triphosphate K03639 - 4.1.99.22 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003571 473.0
DYD1_k127_1721932_12 PhoQ Sensor - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001009 395.0
DYD1_k127_1721932_14 RNase_H superfamily K07502 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000704 301.0
DYD1_k127_1721932_15 Catalyzes the conversion of (8S)-3',8-cyclo-7,8- dihydroguanosine 5'-triphosphate to cyclic pyranopterin monophosphate (cPMP) K03637 - 4.6.1.17 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000003394 279.0
DYD1_k127_1721932_16 Participates in the translocation of lipoproteins from the inner membrane to the outer membrane. Only forms a complex with a lipoprotein if the residue after the N-terminal Cys is not an aspartate (The Asp acts as a targeting signal to indicate that the lipoprotein should stay in the inner membrane) - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000005362 275.0
DYD1_k127_1721932_17 Belongs to the NiCoT transporter (TC 2.A.52) family - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000001558 258.0
DYD1_k127_1721932_18 MoaE protein K03635 - 2.8.1.12 0.0000000000000000000000000000000000000000000000000000000000000000000000003748 248.0
DYD1_k127_1721932_19 AhpC/TSA family K03564 - 1.11.1.15 0.000000000000000000000000000000000000000000000000000000000000000000000007388 244.0
DYD1_k127_1721932_2 DNA-dependent ATPase involved in processing of recombination intermediates, plays a role in repairing DNA breaks. Stimulates the branch migration of RecA-mediated strand transfer reactions, allowing the 3' invading strand to extend heteroduplex DNA faster. Binds ssDNA in the presence of ADP but not other nucleotides, has ATPase activity that is stimulated by ssDNA and various branched DNA structures, but inhibited by SSB. Does not have RecA's homology-searching function K04485 - - 5.44e-241 750.0
DYD1_k127_1721932_20 Evidence 3 Function proposed based on presence of conserved amino acid motif, structural feature or limited homology K06142 - - 0.00000000000000000000000000000000000000000000000000000000000000001202 228.0
DYD1_k127_1721932_21 Thioredoxin-like domain K03671 - - 0.000000000000000000000000000000000000000000000000000000000003773 211.0
DYD1_k127_1721932_22 protein serine/threonine phosphatase activity K01090,K20074 - 3.1.3.16 0.000000000000000000000000000000000000000000000000000009691 201.0
DYD1_k127_1721932_23 Rhodanese-like domain - - - 0.000000000000000000000000000000000000000000000000002041 185.0
DYD1_k127_1721932_25 Mo-molybdopterin cofactor metabolic process K03636 - - 0.00000000000000000000000000000001475 130.0
DYD1_k127_1721932_26 peptidyl-tyrosine sulfation - - - 0.00000000000000000000000000000003663 130.0
DYD1_k127_1721932_27 Protein of unknown function (DUF507) - - - 0.0000000000000000000000000002684 116.0
DYD1_k127_1721932_28 Glycoprotease family K14742 - - 0.000000000000000000000001268 106.0
DYD1_k127_1721932_29 Protein of unknown function (DUF507) - - - 0.00000000000000000000005389 100.0
DYD1_k127_1721932_3 phosphorelay sensor kinase activity K02038,K02282,K07018,K07315 - 3.1.3.3 1.715e-213 714.0
DYD1_k127_1721932_30 Helix-hairpin-helix motif - - - 0.00000000001227 70.0
DYD1_k127_1721932_4 Catalyzes the attachment of serine to tRNA(Ser). Is also able to aminoacylate tRNA(Sec) with serine, to form the misacylated tRNA L-seryl-tRNA(Sec), which will be further converted into selenocysteinyl-tRNA(Sec) K01875 - 6.1.1.11 5.442e-203 639.0
DYD1_k127_1721932_5 May be involved in recombinational repair of damaged DNA K03631 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000208 538.0
DYD1_k127_1721932_6 response regulator K07814 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000475 524.0
DYD1_k127_1721932_7 Component of the acetyl coenzyme A carboxylase (ACC) complex. Biotin carboxylase (BC) catalyzes the carboxylation of biotin on its carrier protein (BCCP) and then the CO(2) group is transferred by the transcarboxylase to acetyl-CoA to form malonyl- CoA K01963 - 2.1.3.15,6.4.1.2 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003654 492.0
DYD1_k127_1721932_8 Elongator protein 3, MiaB family, Radical SAM - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008788 490.0
DYD1_k127_1721932_9 Mur ligase middle domain K11754 - 6.3.2.12,6.3.2.17 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001201 494.0
DYD1_k127_1732592_0 - - - - 0.0000000000000000000000000000000000000000000000000000000000002261 222.0
DYD1_k127_1732592_1 bacterial OsmY and nodulation domain K04065 GO:0005575,GO:0005623,GO:0006457,GO:0006950,GO:0006970,GO:0006972,GO:0008150,GO:0009628,GO:0009987,GO:0030288,GO:0030313,GO:0031975,GO:0042597,GO:0044464,GO:0050896,GO:0061077 - 0.0000001061 58.0
DYD1_k127_1732592_2 RNA-binding protein K13091 GO:0005575,GO:0005622,GO:0005623,GO:0005634,GO:0005654,GO:0016604,GO:0016607,GO:0031974,GO:0031981,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0043233,GO:0044422,GO:0044424,GO:0044428,GO:0044446,GO:0044451,GO:0044464,GO:0070013 - 0.0000004534 57.0
DYD1_k127_1732592_3 Belongs to the UPF0337 (CsbD) family - - - 0.0000005219 53.0
DYD1_k127_1802560_0 glutamate-tRNA ligase activity K01886 GO:0003674,GO:0003824,GO:0004812,GO:0004819,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006082,GO:0006139,GO:0006399,GO:0006412,GO:0006418,GO:0006425,GO:0006518,GO:0006520,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0016070,GO:0016874,GO:0016875,GO:0019538,GO:0019752,GO:0034641,GO:0034645,GO:0034660,GO:0043038,GO:0043039,GO:0043043,GO:0043170,GO:0043436,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044281,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0071704,GO:0090304,GO:0140098,GO:0140101,GO:1901360,GO:1901564,GO:1901566,GO:1901576 6.1.1.18 1.587e-309 954.0
DYD1_k127_1802560_1 Alcohol dehydrogenase GroES-like domain K13979 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008931 485.0
DYD1_k127_1802560_2 Involved in targeting and insertion of nascent membrane proteins into the cytoplasmic membrane. Binds to the hydrophobic signal sequence of the ribosome-nascent chain (RNC) as it emerges from the ribosomes. The SRP-RNC complex is then targeted to the cytoplasmic membrane where it interacts with the SRP receptor FtsY. Interaction with FtsY leads to the transfer of the RNC complex to the Sec translocase for insertion into the membrane, the hydrolysis of GTP by both Ffh and FtsY, and the dissociation of the SRP-FtsY complex into the individual components K03106 - 3.6.5.4 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001328 477.0
DYD1_k127_1802560_3 Lipase (class 3) - - - 0.0000000000000000000000000000000000000000000007171 177.0
DYD1_k127_1802560_4 Evidence 3 Function proposed based on presence of conserved amino acid motif, structural feature or limited homology K07323 - - 0.000000000000000000000000000000000000001543 156.0
DYD1_k127_1802560_5 Inhibits all the catalytic activities of DNA gyrase by preventing its interaction with DNA. Acts by binding directly to the C-terminal domain of GyrB, which probably disrupts DNA binding by the gyrase K09862 - - 0.00000000000003941 74.0
DYD1_k127_1818714_0 NADH-quinone oxidoreductase K00341,K05568,K12139 - 1.6.5.3 0.0 1035.0
DYD1_k127_1818714_1 Evidence 2a Function of homologous gene experimentally demonstrated in an other organism K00342,K05575 - 1.6.5.3 1.168e-293 911.0
DYD1_k127_1818714_10 sirohydrochlorin cobaltochelatase activity - - - 0.0000000000000000000000003727 104.0
DYD1_k127_1818714_12 Belongs to the complex I subunit 6 family K00339 - 1.6.5.3 0.0000000000000000104 83.0
DYD1_k127_1818714_2 Evidence 2a Function of homologous gene experimentally demonstrated in an other organism K00342 GO:0005575,GO:0005623,GO:0005886,GO:0016020,GO:0044464,GO:0071944 1.6.5.3 6.791e-262 821.0
DYD1_k127_1818714_3 NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient K00343 - 1.6.5.3 1.333e-254 792.0
DYD1_k127_1818714_4 Evidence 3 Function proposed based on presence of conserved amino acid motif, structural feature or limited homology - - - 2.436e-206 655.0
DYD1_k127_1818714_5 CHASE3 domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006252 547.0
DYD1_k127_1818714_6 Phosphodiester glycosidase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000318 300.0
DYD1_k127_1818714_7 cheY-homologous receiver domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000003326 246.0
DYD1_k127_1818714_8 Catalyzes the transfer of a ribosyl phosphate group from 5-phosphoribose 1-diphosphate to orotate, leading to the formation of orotidine monophosphate (OMP) K00762 - 2.4.2.10 0.000000000000000000000000000000000000000000000000000000001229 206.0
DYD1_k127_1818714_9 NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient K00340 - 1.6.5.3 0.000000000000000000000000000000000000000000002382 165.0
DYD1_k127_1847950_0 required for the transposition of insertion element IS2404 - - - 0.000000000000000000000000000000000000000000000000000000006029 213.0
DYD1_k127_1847950_1 PFAM Positive regulator of sigma(E) RseC MucC K03803 - - 0.0000000000000000000000000000001134 130.0
DYD1_k127_1847950_2 Transposase IS4 family protein - - - 0.0000000000000000000000000000002993 127.0
DYD1_k127_1847950_3 Transposase IS4 family protein - - - 0.00000000001398 65.0
DYD1_k127_1847950_4 required for the transposition of insertion element IS2404 - - - 0.0000000000266 69.0
DYD1_k127_1847950_5 transposase activity - - - 0.0000000001183 72.0
DYD1_k127_1904912_0 Evidence 3 Function proposed based on presence of conserved amino acid motif, structural feature or limited homology K07323 - - 0.00000000000000000000000000000000000000000000000000000000000000001052 228.0
DYD1_k127_1904912_1 Protein of unknown function, DUF488 - - - 0.0000000000000000000000000000000000000000004918 160.0
DYD1_k127_1904912_4 Has lipid A 3-O-deacylase activity. Hydrolyzes the ester bond at the 3 position of lipid A, a bioactive component of lipopolysaccharide (LPS), thereby releasing the primary fatty acyl moiety K12976,K22110 - - 0.0000000003645 72.0
DYD1_k127_1904912_5 Cytochrome C oxidase, cbb3-type, subunit III K17223 - - 0.000000002355 63.0
DYD1_k127_1904912_6 Produces ATP from ADP in the presence of a proton gradient across the membrane K02120 - - 0.00002869 48.0
DYD1_k127_1911169_0 Concanavalin A-like lectin/glucanases superfamily - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000227 326.0
DYD1_k127_1911169_1 PemK-like, MazF-like toxin of type II toxin-antitoxin system K07171 - - 0.000000000000000000000000000000000000000006366 159.0
DYD1_k127_1911169_2 Transcriptional regulator sugar kinase K00886 - 2.7.1.63 0.000000000000000000000000000000000000001306 149.0
DYD1_k127_1911169_3 - - - - 0.000000000000000000000000002987 122.0
DYD1_k127_1911169_4 SpoVT / AbrB like domain K07172 - - 0.0000000000000000001343 90.0
DYD1_k127_1991442_0 Alcohol dehydrogenase GroES-like domain K13953 - 1.1.1.1 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009489 496.0
DYD1_k127_1991442_1 Catalyzes the condensation reaction of fatty acid synthesis by the addition to an acyl acceptor of two carbons from malonyl-ACP K00647,K09458 - 2.3.1.179,2.3.1.41 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002121 490.0
DYD1_k127_1991442_10 retrograde transport, endosome to Golgi K07095 - - 0.0000000000000000000000000000000000000000000000000004373 190.0
DYD1_k127_1991442_11 Phosphopantetheine attachment site - - - 0.0000000000000000000000000000000000000000003018 165.0
DYD1_k127_1991442_12 FabA-like domain - - - 0.0000000000000000000000000000000000001212 152.0
DYD1_k127_1991442_13 DoxX K15977 - - 0.0000000000000000003581 93.0
DYD1_k127_1991442_14 - - - - 0.000000001897 60.0
DYD1_k127_1991442_2 Beta-ketoacyl synthase, C-terminal domain K00647 - 2.3.1.41 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007724 377.0
DYD1_k127_1991442_3 KR domain K10780 - 1.3.1.104 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000002702 297.0
DYD1_k127_1991442_4 DNA-3-methyladenine glycosylase K01246 - 3.2.2.20 0.000000000000000000000000000000000000000000000000000000000000000000000003517 248.0
DYD1_k127_1991442_5 Has an important function as a repair enzyme for proteins that have been inactivated by oxidation. Catalyzes the reversible oxidation-reduction of methionine sulfoxide in proteins to methionine K07304 - 1.8.4.11 0.00000000000000000000000000000000000000000000000000000000000000000000008893 242.0
DYD1_k127_1991442_6 lipid A biosynthesis K02517 - 2.3.1.241 0.00000000000000000000000000000000000000000000000000000000000000000001079 248.0
DYD1_k127_1991442_7 Channel that opens in response to stretch forces in the membrane lipid bilayer. May participate in the regulation of osmotic pressure changes within the cell K03282 GO:0003674,GO:0005215,GO:0005575,GO:0006810,GO:0006811,GO:0006884,GO:0008150,GO:0008361,GO:0008381,GO:0009987,GO:0009992,GO:0015267,GO:0016020,GO:0016021,GO:0016043,GO:0019725,GO:0022803,GO:0022836,GO:0022857,GO:0030104,GO:0031224,GO:0032535,GO:0042592,GO:0044425,GO:0048878,GO:0051179,GO:0051234,GO:0055082,GO:0055085,GO:0065007,GO:0065008,GO:0071840,GO:0090066 - 0.00000000000000000000000000000000000000000000000000000000000000003076 226.0
DYD1_k127_1991442_8 with different specificities (related to short-chain alcohol K00059 - 1.1.1.100 0.00000000000000000000000000000000000000000000000000000000002519 214.0
DYD1_k127_1991442_9 Protein of unknown function (DUF664) - - - 0.000000000000000000000000000000000000000000000000000000003492 204.0
DYD1_k127_1995784_0 Glycosyl hydrolase 36 superfamily, catalytic domain K13688,K18786 GO:0003674,GO:0003824,GO:0016740,GO:0016757 2.4.1.321 0.0 1662.0
DYD1_k127_1995784_1 amine dehydrogenase activity - - - 0.000000000000000000000000000000000000000000000002494 177.0
DYD1_k127_1995784_2 IMP dehydrogenase activity K09137 - - 0.00000000000000000000000000000000000000004818 156.0
DYD1_k127_1995784_3 light absorption - - - 0.000000000000000000000000000000002189 133.0
DYD1_k127_1995784_4 - - - - 0.00000000000000000000000000007311 119.0
DYD1_k127_1995784_5 Belongs to the TPP enzyme family K01652 - 2.2.1.6 0.000000000000001636 79.0
DYD1_k127_1995784_7 nuclease K01174 - 3.1.31.1 0.0000002574 57.0
DYD1_k127_1995784_8 COG2801 Transposase and inactivated derivatives - - - 0.000006353 50.0
DYD1_k127_2017423_0 Part of the phosphoribosylformylglycinamidine synthase complex involved in the purines biosynthetic pathway. Catalyzes the ATP-dependent conversion of formylglycinamide ribonucleotide (FGAR) and glutamine to yield formylglycinamidine ribonucleotide (FGAM) and glutamate. The FGAM synthase complex is composed of three subunits. PurQ produces an ammonia molecule by converting glutamine to glutamate. PurL transfers the ammonia molecule to FGAR to form FGAM in an ATP-dependent manner. PurS interacts with PurQ and PurL and is thought to assist in the transfer of the ammonia molecule from PurQ to PurL K01952 - 6.3.5.3 0.0 1194.0
DYD1_k127_2017423_1 Catalyzes the formation of phosphoribosylamine from phosphoribosylpyrophosphate (PRPP) and glutamine K00764 - 2.4.2.14 1.476e-255 794.0
DYD1_k127_2017423_14 Thiol-disulfide oxidoreductase dcc - - - 0.000004938 54.0
DYD1_k127_2017423_15 - - - - 0.0001207 47.0
DYD1_k127_2017423_2 Critical role in recombination and DNA repair. Helps process Holliday junction intermediates to mature products by catalyzing branch migration. Has a DNA unwinding activity characteristic of a DNA helicase with a 3'- to 5'- polarity. Unwinds branched duplex DNA (Y-DNA) K03655 - 3.6.4.12 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005584 560.0
DYD1_k127_2017423_3 photosynthesis K02453,K02660 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001056 546.0
DYD1_k127_2017423_4 peptidyl-tyrosine sulfation - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001621 455.0
DYD1_k127_2017423_5 Thiolesterase that catalyzes the hydrolysis of S-D- lactoyl-glutathione to form glutathione and D-lactic acid - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004147 327.0
DYD1_k127_2017423_6 Part of the phosphoribosylformylglycinamidine synthase complex involved in the purines biosynthetic pathway. Catalyzes the ATP-dependent conversion of formylglycinamide ribonucleotide (FGAR) and glutamine to yield formylglycinamidine ribonucleotide (FGAM) and glutamate. The FGAM synthase complex is composed of three subunits. PurQ produces an ammonia molecule by converting glutamine to glutamate. PurL transfers the ammonia molecule to FGAR to form FGAM in an ATP-dependent manner. PurS interacts with PurQ and PurL and is thought to assist in the transfer of the ammonia molecule from PurQ to PurL K01952 - 6.3.5.3 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000002768 293.0
DYD1_k127_2017423_7 peroxiredoxin activity - - - 0.000000000000000000000000000000000000000000000000000000000000000000000001239 250.0
DYD1_k127_2017423_9 Dimerisation domain - - - 0.0000000000000000000000000000000000000000000000141 186.0
DYD1_k127_2050714_0 In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity K02335 - 2.7.7.7 0.0 1163.0
DYD1_k127_2050714_1 Belongs to the sulfur carrier protein TusA family - - - 0.00000000000000000000000000000000000000000000000000000000000008997 216.0
DYD1_k127_2050714_10 - - - - 0.000000000000006421 78.0
DYD1_k127_2050714_11 Transcriptional regulator K13655 - - 0.00004708 49.0
DYD1_k127_2050714_12 In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity K02335 - 2.7.7.7 0.0002209 47.0
DYD1_k127_2050714_2 - - - - 0.000000000000000000000000000000000000000000008496 170.0
DYD1_k127_2050714_3 IrrE N-terminal-like domain - - - 0.0000000000000000000000000000000000000000002317 174.0
DYD1_k127_2050714_4 Ribonuclease toxin, BrnT, of type II toxin-antitoxin system - - - 0.000000000000000000000000000006302 121.0
DYD1_k127_2050714_6 Phage derived protein Gp49-like (DUF891) - - - 0.000000000000000000000003489 110.0
DYD1_k127_2050714_7 In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity K02335 - 2.7.7.7 0.0000000000000000000003197 97.0
DYD1_k127_2050714_8 Helix-turn-helix domain - - - 0.00000000000000000001524 99.0
DYD1_k127_2050714_9 PFAM HhH-GPD superfamily base excision DNA repair protein K10773 - 4.2.99.18 0.0000000000000000000427 89.0
DYD1_k127_2052896_0 Transcriptional regulator, Crp Fnr family - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000002031 282.0
DYD1_k127_2052896_1 Putative AphA-like transcriptional regulator - - - 0.00000000000000000000000000000000000002287 149.0
DYD1_k127_2066055_0 Saccharopine dehydrogenase NADP binding domain - - - 0.00000000000000000000000000000000000000000000000000000000000000007106 229.0
DYD1_k127_2066055_1 oxidoreductase activity, acting on CH-OH group of donors - - - 0.00000000000000000000000000000000000000000000000000006803 191.0
DYD1_k127_2066055_2 - - - - 0.00000000001862 74.0
DYD1_k127_2081037_0 Belongs to the SOS response-associated peptidase family - - - 0.0000000000000000000000000000000000001041 145.0
DYD1_k127_2081037_1 PhoQ Sensor - - - 0.00000000000000002741 94.0
DYD1_k127_2081037_2 Histidine kinase - - - 0.0000000000000001569 90.0
DYD1_k127_2081037_3 Prokaryotic N-terminal methylation motif - - - 0.0005553 49.0
DYD1_k127_2091158_0 Pirin K06911 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003206 398.0
DYD1_k127_2091158_2 DSBA-like thioredoxin domain - - - 0.000000000000000000000000000000000000000000000000000000000000000004847 231.0
DYD1_k127_2091158_3 lactoylglutathione lyase activity K01759 - 4.4.1.5 0.0000000000000000000000000000000000000000000000000000000000000004341 222.0
DYD1_k127_2179334_0 Radical SAM superfamily K04069 - 1.97.1.4 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001307 597.0
DYD1_k127_2179334_1 PFAM Peptidase family M28 - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005005 357.0
DYD1_k127_2179334_10 DNA ligase K01971 - 6.5.1.1 0.00000000000000000000000000000000000000000000001173 177.0
DYD1_k127_2179334_11 PFAM Fatty acid hydroxylase - - - 0.0000000000000000000000000000000000000000000002755 170.0
DYD1_k127_2179334_12 Uncharacterised protein family UPF0047 - - - 0.0000000000000000000000000000000000007996 145.0
DYD1_k127_2179334_13 Evidence 3 Function proposed based on presence of conserved amino acid motif, structural feature or limited homology K07285 - - 0.000000000000000000000000000000000003393 152.0
DYD1_k127_2179334_14 Belongs to the small heat shock protein (HSP20) family K13993 - - 0.0000000000000000000000000000000001535 138.0
DYD1_k127_2179334_15 THUMP - - - 0.0000000000000000000000000000008809 128.0
DYD1_k127_2179334_16 - - - - 0.000000000000000000000000000006271 128.0
DYD1_k127_2179334_17 Universal stress protein - - - 0.000000000007044 76.0
DYD1_k127_2179334_18 membrane protein (DUF2078) K08982 - - 0.0000000002302 63.0
DYD1_k127_2179334_19 Hydrolase - - - 0.0000000003357 66.0
DYD1_k127_2179334_2 RNA-3'-phosphate cyclase activity K01974 GO:0003674,GO:0003824,GO:0003963,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0009975,GO:0016874,GO:0016886,GO:0044424,GO:0044464,GO:0140098 6.5.1.4 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002226 350.0
DYD1_k127_2179334_21 Evidence 3 Function proposed based on presence of conserved amino acid motif, structural feature or limited homology K07323 - - 0.0003284 46.0
DYD1_k127_2179334_3 ATP binding to DnaK triggers the release of the substrate protein, thus completing the reaction cycle. Several rounds of ATP-dependent interactions between DnaJ, DnaK and GrpE are required for fully efficient folding. Also involved, together with DnaK and GrpE, in the DNA replication of plasmids through activation of initiation proteins K03686 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006154 326.0
DYD1_k127_2179334_4 Bacterial capsule synthesis protein PGA_cap K07282 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000003111 298.0
DYD1_k127_2179334_5 BON domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000002083 260.0
DYD1_k127_2179334_6 positive regulation of acetylcholine metabolic process K06910 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000007739 247.0
DYD1_k127_2179334_7 methyltransferase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000001325 252.0
DYD1_k127_2179334_8 PFAM Fatty acid hydroxylase - - - 0.0000000000000000000000000000000000000000000000000000002009 196.0
DYD1_k127_2179334_9 Phosphoribosyl transferase domain - - - 0.00000000000000000000000000000000000000000000000000002328 198.0
DYD1_k127_218049_0 belongs to the aldehyde dehydrogenase family K00294,K13821 - 1.2.1.88,1.5.5.2 0.0 1247.0
DYD1_k127_218049_1 alpha beta alpha domain I K01835 - 5.4.2.2 2.988e-262 824.0
DYD1_k127_218049_2 Catalyzes the radical-mediated insertion of two sulfur atoms into the C-6 and C-8 positions of the octanoyl moiety bound to the lipoyl domains of lipoate-dependent enzymes, thereby converting the octanoylated domains into lipoylated derivatives K03644 - 2.8.1.8 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000709 501.0
DYD1_k127_218049_3 Binds and transfers iron-sulfur (Fe-S) clusters to target apoproteins. Can hydrolyze ATP K03593 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008189 434.0
DYD1_k127_218049_4 LmbE family - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000009273 253.0
DYD1_k127_218049_5 oxidoreductase activity, acting on CH-OH group of donors K00059 - 1.1.1.100 0.00000000000000000000000000000000000000000000000000000000000000000001337 243.0
DYD1_k127_218049_6 Evidence 3 Function proposed based on presence of conserved amino acid motif, structural feature or limited homology K00363,K05710 - 1.7.1.15 0.00000000000000000000000000000000000000000000006296 170.0
DYD1_k127_218049_8 Transposase - - - 0.00000000000000000000000000000000000266 138.0
DYD1_k127_2182470_0 aerobic electron transport chain K00425,K08738 - 1.10.3.14 3.396e-297 922.0
DYD1_k127_2182470_1 rRNA (guanine-N2-)-methyltransferase activity K09846,K13604,K21460 GO:0003674,GO:0003824,GO:0006725,GO:0006778,GO:0006779,GO:0006807,GO:0008150,GO:0008152,GO:0008168,GO:0009058,GO:0009987,GO:0015994,GO:0015995,GO:0016740,GO:0016741,GO:0018130,GO:0019438,GO:0030493,GO:0030494,GO:0032259,GO:0033013,GO:0033014,GO:0034641,GO:0036067,GO:0036069,GO:0042440,GO:0044237,GO:0044249,GO:0044271,GO:0046148,GO:0046483,GO:0051186,GO:0051188,GO:0071704,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576 2.1.1.210,2.1.1.304,2.1.1.333 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002915 487.0
DYD1_k127_2182470_2 PFAM blue (type 1) copper domain protein - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000545 436.0
DYD1_k127_2182470_3 Evidence 4 Homologs of previously reported genes of - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000102 435.0
DYD1_k127_2182470_4 membrane K08976 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003783 332.0
DYD1_k127_2182470_9 Required for maturation of urease via the functional incorporation of the urease nickel metallocenter K03190 - - 0.00000000000000000002269 98.0
DYD1_k127_2204761_0 - - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000001382 268.0
DYD1_k127_2204761_1 3-demethylubiquinone-9 3-methyltransferase - - - 0.0000000000000000000000000000000000000000000000000000000000000000004282 231.0
DYD1_k127_2204761_2 Domain of unknown function (DUF2703) - - - 0.00000000000000000000000000000000000000000001627 168.0
DYD1_k127_2204761_3 PFAM Radical SAM superfamily - - - 0.00000000000000000000000000002271 118.0
DYD1_k127_2204761_4 Protein of unknown function (DUF3568) - - - 0.00000000000000000001979 96.0
DYD1_k127_2204899_0 Cytochrome C biogenesis protein transmembrane region K06196 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002351 428.0
DYD1_k127_2204899_1 Tetratricopeptide repeat K05807 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006788 314.0
DYD1_k127_2204899_2 cell redox homeostasis - - - 0.000000000000000000000000000000000000000000000000000000000000008761 221.0
DYD1_k127_2204899_3 Catalyzes the condensation reaction of fatty acid synthesis by the addition to an acyl acceptor of two carbons from malonyl-ACP. Catalyzes the first condensation reaction which initiates fatty acid synthesis and may therefore play a role in governing the total rate of fatty acid production. Possesses both acetoacetyl-ACP synthase and acetyl transacylase activities. Its substrate specificity determines the biosynthesis of branched- chain and or straight-chain of fatty acids K00648 - 2.3.1.180 0.0000000000000000000000000000000000000000000000000001348 190.0
DYD1_k127_2280396_0 MMPL family - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000463 498.0
DYD1_k127_2280396_1 Belongs to the beta-ketoacyl-ACP synthases family K00647 - 2.3.1.41 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004063 465.0
DYD1_k127_2280396_2 KR domain K00059 - 1.1.1.100 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002342 314.0
DYD1_k127_2280396_3 Glycosyl transferase family 2 - - - 0.000000000000000000000000000000000000000000000000000000000000004706 226.0
DYD1_k127_2280396_4 Beta-ketoacyl synthase, N-terminal domain - - - 0.000000000000000000000000000000000000000000000000000000003039 213.0
DYD1_k127_2280396_5 dehydratase - - - 0.000000000000000000000000000000001319 135.0
DYD1_k127_2280396_6 Outer membrane lipoprotein carrier protein LolA - - - 0.000000000000000000000001481 108.0
DYD1_k127_2284977_0 Tfp pilus assembly protein tip-associated adhesin K02674 - - 5.257e-262 826.0
DYD1_k127_2284977_1 Type II/IV secretion system protein K02454,K02652 - - 2.986e-247 776.0
DYD1_k127_2284977_10 response regulator K03413 - - 0.0000000000000000000000000039 113.0
DYD1_k127_2284977_12 protein transport across the cell outer membrane K02457,K02672,K08084,K08085 - - 0.00000000000000000000000007722 113.0
DYD1_k127_2284977_13 type IV pilus modification protein PilV K02671,K02681,K10927 - - 0.0000000000000000000005656 102.0
DYD1_k127_2284977_15 Prokaryotic N-terminal methylation motif K08084 - - 0.000006218 55.0
DYD1_k127_2284977_2 DALR_2 K01883 GO:0000166,GO:0003674,GO:0003824,GO:0004812,GO:0004817,GO:0005488,GO:0005524,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006082,GO:0006139,GO:0006399,GO:0006412,GO:0006418,GO:0006423,GO:0006518,GO:0006520,GO:0006725,GO:0006807,GO:0008144,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0016070,GO:0016874,GO:0016875,GO:0017076,GO:0019538,GO:0019752,GO:0030554,GO:0032553,GO:0032555,GO:0032559,GO:0034641,GO:0034645,GO:0034660,GO:0035639,GO:0036094,GO:0043038,GO:0043039,GO:0043043,GO:0043167,GO:0043168,GO:0043170,GO:0043436,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044281,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0071704,GO:0090304,GO:0097159,GO:0097367,GO:0140098,GO:0140101,GO:1901265,GO:1901360,GO:1901363,GO:1901564,GO:1901566,GO:1901576 6.1.1.16 1.066e-215 684.0
DYD1_k127_2284977_3 Pilus assembly protein PilX K07140 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000175 374.0
DYD1_k127_2284977_4 Cleaves type-4 fimbrial leader sequence and methylates the N-terminal (generally Phe) residue K02654 - 3.4.23.43 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000864 351.0
DYD1_k127_2284977_5 Belongs to the class IV-like SAM-binding methyltransferase superfamily. RNA methyltransferase TrmH family K03218 - 2.1.1.185 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001255 320.0
DYD1_k127_2284977_6 pilus assembly protein PilW K02672 - - 0.0000000000000000000000000000000000000000000000000001218 205.0
DYD1_k127_2284977_7 FtsZ-dependent cytokinesis - - - 0.00000000000000000000000000000000000000001236 155.0
DYD1_k127_2284977_8 pilus assembly protein PilW K02672 - - 0.000000000000000000000000000000002813 139.0
DYD1_k127_2284977_9 Putative Competence protein ComGF K02246,K02248 - - 0.00000000000000000000000000000003231 134.0
DYD1_k127_2315380_0 Ring hydroxylating alpha subunit (catalytic domain) K03268,K05708 - 1.14.12.11,1.14.12.19,1.14.12.3 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004996 433.0
DYD1_k127_2315380_1 Tripartite tricarboxylate transporter TctA family - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007776 383.0
DYD1_k127_2315380_2 Transglycosylase SLT domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000004801 272.0
DYD1_k127_2315380_3 Ring hydroxylating beta subunit - - - 0.000000000000000000000000000000000000000000000005293 178.0
DYD1_k127_2315380_4 protein conserved in bacteria - - - 0.0000000000000000000001233 111.0
DYD1_k127_2315380_5 Belongs to the acetyltransferase family. ArgA subfamily - - - 0.0000000000241 70.0
DYD1_k127_2328258_0 Acyl-CoA reductase (LuxC) - - - 0.00000000000000000000000000000000000000000013 165.0
DYD1_k127_2328258_1 Predicted membrane protein (DUF2254) - - - 0.0000000000000000000000000000000005034 133.0
DYD1_k127_2328258_2 Phage integrase, N-terminal SAM-like domain - - - 0.0000000000000000000008817 98.0
DYD1_k127_2395278_0 DNA methylase K07316 - 2.1.1.72 1.192e-271 844.0
DYD1_k127_2395278_1 Type III restriction enzyme, res subunit K01156 - 3.1.21.5 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005841 443.0
DYD1_k127_2403089_0 Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family K03296,K18138,K19585 - - 0.0 1527.0
DYD1_k127_2403089_1 Major facilitator Superfamily K08218 - - 8.183e-248 774.0
DYD1_k127_2403089_10 Ring cyclization and eight-electron oxidation of 3a-(2- amino-2-carboxyethyl)-4,5-dioxo-4,5,6,7,8,9-hexahydroquinoline- 7,9-dicarboxylic-acid to PQQ K06137 - 1.3.3.11 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006783 323.0
DYD1_k127_2403089_11 3-methyladenine DNA glycosylase 8-oxoguanine DNA glycosylase K00567,K01247 - 2.1.1.63,3.2.2.21 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000001207 300.0
DYD1_k127_2403089_12 coenzyme F420-1:gamma-L-glutamate ligase activity - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000008254 290.0
DYD1_k127_2403089_13 May be involved in the transport of PQQ or its precursor to the periplasm K06136 GO:0006082,GO:0006464,GO:0006732,GO:0006766,GO:0006767,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009108,GO:0009110,GO:0009987,GO:0016053,GO:0018130,GO:0018189,GO:0018193,GO:0018212,GO:0019538,GO:0019752,GO:0034641,GO:0036211,GO:0042180,GO:0042181,GO:0042364,GO:0043170,GO:0043412,GO:0043436,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044281,GO:0044283,GO:0046394,GO:0046483,GO:0051186,GO:0051188,GO:0071704,GO:0072350,GO:0072351,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576,GO:1901661,GO:1901663 - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000002611 287.0
DYD1_k127_2403089_14 Predicted permease K07089 - - 0.0000000000000000000000000000000000000000001118 166.0
DYD1_k127_2403089_2 Sigma-54 interaction domain K15836 - - 2.444e-204 656.0
DYD1_k127_2403089_3 TIGRFAM RND efflux system, outer membrane lipoprotein, NodT K18139 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000282 556.0
DYD1_k127_2403089_4 Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family K03585 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000069 516.0
DYD1_k127_2403089_5 Glucose / Sorbosone dehydrogenase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002952 509.0
DYD1_k127_2403089_6 biosynthesis protein E K06139 GO:0006082,GO:0006464,GO:0006732,GO:0006766,GO:0006767,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009108,GO:0009110,GO:0009987,GO:0016053,GO:0018130,GO:0018189,GO:0018193,GO:0018212,GO:0019538,GO:0019752,GO:0034641,GO:0036211,GO:0042180,GO:0042181,GO:0042364,GO:0043170,GO:0043412,GO:0043436,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044281,GO:0044283,GO:0046394,GO:0046483,GO:0051186,GO:0051188,GO:0071704,GO:0072350,GO:0072351,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576,GO:1901661,GO:1901663 - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005116 465.0
DYD1_k127_2403089_7 electron transfer activity K03616 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000161 390.0
DYD1_k127_2403089_8 Reductase C-terminal - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001967 364.0
DYD1_k127_2403089_9 Evidence 2a Function of homologous gene experimentally demonstrated in an other organism K00059 - 1.1.1.100 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001662 341.0
DYD1_k127_2419962_0 Belongs to the metallo-dependent hydrolases superfamily. Urease alpha subunit family K01428 - 3.5.1.5 1.411e-288 894.0
DYD1_k127_2419962_1 Nacht domain - - - 1.681e-210 702.0
DYD1_k127_2419962_10 Required for maturation of urease via the functional incorporation of the urease nickel metallocenter K03190 - - 0.00000000000000000000000000002171 126.0
DYD1_k127_2419962_11 Urease accessory protein UreF K03188 - - 0.00000000000000000000006286 108.0
DYD1_k127_2419962_2 Periplasmic binding protein domain K01999 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003623 546.0
DYD1_k127_2419962_3 Belongs to the binding-protein-dependent transport system permease family K11960 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003049 361.0
DYD1_k127_2419962_4 Belongs to the binding-protein-dependent transport system permease family K11961 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004403 355.0
DYD1_k127_2419962_5 Facilitates the functional incorporation of the urease nickel metallocenter. This process requires GTP hydrolysis, probably effectuated by UreG K03189 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000829 295.0
DYD1_k127_2419962_6 PFAM ABC transporter K01996,K11963 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000007143 282.0
DYD1_k127_2419962_7 Branched-chain amino acid ATP-binding cassette transporter K11962 - - 0.000000000000000000000000000000000000000000000000000000000000000000006478 259.0
DYD1_k127_2419962_8 Belongs to the urease gamma subunit family K01430 - 3.5.1.5 0.000000000000000000000000000000000000000000772 160.0
DYD1_k127_2419962_9 Belongs to the urease K01429,K14048 - 3.5.1.5 0.0000000000000000000000000000000000000000008309 162.0
DYD1_k127_2424479_0 GHKL domain K13598 - 2.7.13.3 0.0 1159.0
DYD1_k127_2424479_1 Bacterial regulatory protein, Fis family K13599 - - 7.931e-238 741.0
DYD1_k127_2424479_2 AIR synthase related protein, N-terminal domain K01933 - 6.3.3.1 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001502 509.0
DYD1_k127_2424479_3 Sodium/hydrogen exchanger family - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002199 486.0
DYD1_k127_2424479_4 Catalyzes the transfer of a formyl group from 10- formyltetrahydrofolate to 5-phospho-ribosyl-glycinamide (GAR), producing 5-phospho-ribosyl-N-formylglycinamide (FGAR) and tetrahydrofolate K11175 - 2.1.2.2 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000647 304.0
DYD1_k127_2424479_6 COGs COG0823 Periplasmic component of the Tol biopolymer transport system - - - 0.00001453 57.0
DYD1_k127_2432854_0 Prevents misfolding and promotes the refolding and proper assembly of unfolded polypeptides generated under stress conditions K04077 GO:0003674,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006457,GO:0006458,GO:0008150,GO:0009987,GO:0016465,GO:0032991,GO:0044183,GO:0044424,GO:0044444,GO:0044445,GO:0044464,GO:0051082,GO:0061077,GO:0101031,GO:1990220 - 1.155e-318 981.0
DYD1_k127_2432854_1 Belongs to the lyase 1 family. Adenylosuccinate lyase subfamily K01756 - 4.3.2.2 5.278e-233 726.0
DYD1_k127_2432854_2 Catalyzes the conversion of D-ribulose 5-phosphate to formate and 3,4-dihydroxy-2-butanone 4-phosphate K14652 - 3.5.4.25,4.1.99.12 4.645e-215 672.0
DYD1_k127_2432854_3 sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released K03089 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001527 482.0
DYD1_k127_2432854_4 Catalyzes the formation of 6,7-dimethyl-8- ribityllumazine by condensation of 5-amino-6-(D- ribitylamino)uracil with 3,4-dihydroxy-2-butanone 4-phosphate. This is the penultimate step in the biosynthesis of riboflavin K00794 GO:0000906,GO:0003674,GO:0003824,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006766,GO:0006767,GO:0006771,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009110,GO:0009231,GO:0009987,GO:0016740,GO:0016765,GO:0017144,GO:0018130,GO:0034641,GO:0042364,GO:0042726,GO:0042727,GO:0044237,GO:0044249,GO:0044271,GO:0044281,GO:0044283,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0071704,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576 2.5.1.78 0.0000000000000000000000000000000000000000000000000000000000000001937 226.0
DYD1_k127_2432854_5 - - - - 0.0000000000000000000000000000000000000000000000000000000000422 207.0
DYD1_k127_2432854_6 Involved in transcription antitermination. Required for transcription of ribosomal RNA (rRNA) genes. Binds specifically to the boxA antiterminator sequence of the ribosomal RNA (rrn) operons K03625 - - 0.000000000000000000000000000000000000000000000000000000003852 204.0
DYD1_k127_2432854_7 Binds to Cpn60 in the presence of Mg-ATP and suppresses the ATPase activity of the latter K04078 GO:0003674,GO:0005488,GO:0005515,GO:0006457,GO:0006458,GO:0006950,GO:0006986,GO:0008150,GO:0009987,GO:0010033,GO:0035966,GO:0042221,GO:0043167,GO:0043169,GO:0046872,GO:0050896,GO:0051082,GO:0051084,GO:0051085,GO:0051087,GO:0061077 - 0.0000000000000000000000000000000000000000000000002603 177.0
DYD1_k127_2472217_0 amine dehydrogenase activity - - - 0.0 1715.0
DYD1_k127_2472217_1 Aspartyl-tRNA synthetase with relaxed tRNA specificity since it is able to aspartylate not only its cognate tRNA(Asp) but also tRNA(Asn). Reaction proceeds in two steps L-aspartate is first activated by ATP to form Asp-AMP and then transferred to the acceptor end of tRNA(Asp Asn) K01876 - 6.1.1.12 0.0 1057.0
DYD1_k127_2472217_10 Participates in chromosomal partition during cell division. May act via the formation of a condensin-like complex containing Smc and ScpA that pull DNA away from mid-cell into both cell halves K06024 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000005164 279.0
DYD1_k127_2472217_11 protein homooligomerization - - - 0.000000000000000000000000000000000000000000000000000000000000000000006781 246.0
DYD1_k127_2472217_12 - - - - 0.000000000000000000000000000000000000000000000000000000000000000001564 233.0
DYD1_k127_2472217_13 OmpA family K02557 - - 0.00000000000000000000000000000000000000000000001795 188.0
DYD1_k127_2472217_14 PFAM blue (type 1) copper domain protein K00368 - 1.7.2.1 0.00000000000000000000000000000005677 129.0
DYD1_k127_2472217_2 Catalyzes the synthesis of GMP from XMP K01951 - 6.3.5.2 1.296e-298 921.0
DYD1_k127_2472217_3 Catalyzes the conversion of inosine 5'-phosphate (IMP) to xanthosine 5'-phosphate (XMP), the first committed and rate- limiting step in the de novo synthesis of guanine nucleotides, and therefore plays an important role in the regulation of cell growth K00088 - 1.1.1.205 2.059e-271 841.0
DYD1_k127_2472217_4 methyltransferase - - - 1.237e-265 823.0
DYD1_k127_2472217_5 Catalyzes the anti-1,4-elimination of the C-3 phosphate and the C-6 proR hydrogen from 5-enolpyruvylshikimate-3-phosphate (EPSP) to yield chorismate, which is the branch point compound that serves as the starting substrate for the three terminal pathways of aromatic amino acid biosynthesis. This reaction introduces a second double bond into the aromatic ring system K01736 - 4.2.3.5 2.167e-205 645.0
DYD1_k127_2472217_6 serine-type endopeptidase activity K04771 - 3.4.21.107 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002973 492.0
DYD1_k127_2472217_7 Evidence 3 Function proposed based on presence of conserved amino acid motif, structural feature or limited homology K01524 - 3.6.1.11,3.6.1.40 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000264 404.0
DYD1_k127_2472217_8 Belongs to the pseudouridine synthase RsuA family K06178,K06181,K06182 - 5.4.99.20,5.4.99.21,5.4.99.22 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003339 392.0
DYD1_k127_2472217_9 Participates in chromosomal partition during cell division. May act via the formation of a condensin-like complex containing Smc and ScpB that pull DNA away from mid-cell into both cell halves K05896 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005163 364.0
DYD1_k127_2480081_0 Protoporphyrinogen oxidase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002155 527.0
DYD1_k127_2480081_1 PUA-like domain K00958 - 2.7.7.4 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009289 473.0
DYD1_k127_2480081_2 transferase activity, transferring glycosyl groups - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000133 378.0
DYD1_k127_2480081_3 Glycosyl transferase family 21 - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001642 323.0
DYD1_k127_2480081_4 Glycosyl transferases group 1 - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000004119 291.0
DYD1_k127_2480081_5 Catalyzes the synthesis of activated sulfate K00390,K00860,K00958,K13811 GO:0000096,GO:0000103,GO:0003674,GO:0003824,GO:0004020,GO:0004779,GO:0004781,GO:0006082,GO:0006520,GO:0006790,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0009987,GO:0010134,GO:0016301,GO:0016310,GO:0016740,GO:0016772,GO:0016773,GO:0016779,GO:0019379,GO:0019419,GO:0019752,GO:0043436,GO:0044237,GO:0044238,GO:0044281,GO:0055114,GO:0070566,GO:0071704,GO:1901564 1.8.4.10,1.8.4.8,2.7.1.25,2.7.7.4 0.0000000000000000000000000000000000000000000000000000000000000004653 228.0
DYD1_k127_254368_0 PFAM LOR SDH bifunctional enzyme conserved region - - - 3.413e-201 633.0
DYD1_k127_254368_1 AAA domain, putative AbiEii toxin, Type IV TA system K01990 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001459 496.0
DYD1_k127_254368_10 deoxyhypusine monooxygenase activity K02632 - 4.4.1.31 0.00000000000000000000000000000000000000000000000000000000000000000646 231.0
DYD1_k127_254368_11 Winged helix-turn-helix DNA-binding - - - 0.00000000000000000000000000000000000000000000000000000000003944 208.0
DYD1_k127_254368_14 Has lipid A 3-O-deacylase activity. Hydrolyzes the ester bond at the 3 position of lipid A, a bioactive component of lipopolysaccharide (LPS), thereby releasing the primary fatty acyl moiety - - - 0.000000000713 68.0
DYD1_k127_254368_2 Transport permease protein K01992 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001859 463.0
DYD1_k127_254368_3 pseudouridine synthase activity K06176 GO:0001522,GO:0003674,GO:0003824,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006139,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0009451,GO:0009982,GO:0009987,GO:0016070,GO:0016853,GO:0016866,GO:0034641,GO:0043170,GO:0043412,GO:0044237,GO:0044238,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0071704,GO:0090304,GO:1901360 5.4.99.27 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001346 459.0
DYD1_k127_254368_4 Transglutaminase-like superfamily - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006248 434.0
DYD1_k127_254368_5 dimethylargininase activity K00819 GO:0003674,GO:0003824,GO:0016403,GO:0016787,GO:0016810,GO:0016813 2.6.1.13 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008826 430.0
DYD1_k127_254368_6 Lipocalin-like domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009283 439.0
DYD1_k127_254368_7 Calcineurin-like phosphoesterase K07098 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003662 369.0
DYD1_k127_254368_8 tRNA 3'-trailer cleavage - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009756 362.0
DYD1_k127_254368_9 ATP-dependent protease La (LON) substrate-binding domain K07157 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000001124 274.0
DYD1_k127_2563776_0 In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity K02335 - 2.7.7.7 0.0 1247.0
DYD1_k127_2563776_1 Belongs to the monovalent cation proton antiporter 2 (CPA2) transporter (TC 2.A.37) family K03455 - - 1.446e-302 940.0
DYD1_k127_2563776_10 2-methylcitrate dehydratase activity K01720 GO:0003674,GO:0003824,GO:0005575,GO:0005618,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006082,GO:0006629,GO:0006631,GO:0008150,GO:0008152,GO:0009056,GO:0009062,GO:0009268,GO:0009628,GO:0009987,GO:0010447,GO:0016042,GO:0016054,GO:0016829,GO:0016835,GO:0016836,GO:0016999,GO:0017001,GO:0017144,GO:0019541,GO:0019543,GO:0019626,GO:0019629,GO:0019679,GO:0019752,GO:0030312,GO:0032787,GO:0042737,GO:0043436,GO:0044237,GO:0044238,GO:0044242,GO:0044248,GO:0044255,GO:0044281,GO:0044282,GO:0044424,GO:0044444,GO:0044464,GO:0046395,GO:0046459,GO:0047547,GO:0050896,GO:0071704,GO:0071944,GO:0072329,GO:1901575 4.2.1.79 4.779e-217 683.0
DYD1_k127_2563776_11 Beta-eliminating lyase K01667 - 4.1.99.1 7.535e-216 679.0
DYD1_k127_2563776_12 Belongs to the thiolase family K00626 - 2.3.1.9 3.758e-211 662.0
DYD1_k127_2563776_13 Belongs to the thiolase family K00626 - 2.3.1.9 2.227e-198 623.0
DYD1_k127_2563776_14 oxidoreductase activity, acting on the aldehyde or oxo group of donors, disulfide as acceptor K00167,K11381,K21417 - 1.2.4.4 1.574e-194 608.0
DYD1_k127_2563776_15 Catalyzes the decarboxylative condensation of pimeloyl- acyl-carrier protein and L-alanine to produce 8-amino-7- oxononanoate (AON), acyl-carrier protein , and carbon dioxide K00639 - 2.3.1.29 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005403 595.0
DYD1_k127_2563776_16 oxidoreductase activity, acting on the aldehyde or oxo group of donors, disulfide as acceptor K00161,K11381,K21416 - 1.2.4.1,1.2.4.4 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003924 587.0
DYD1_k127_2563776_17 - - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001082 591.0
DYD1_k127_2563776_18 alcohol dehydrogenase K00060,K07777 - 1.1.1.103,2.7.13.3 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004076 571.0
DYD1_k127_2563776_19 Histidine kinase K00060,K07777 - 1.1.1.103,2.7.13.3 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002074 569.0
DYD1_k127_2563776_2 Catalyzes the reversible interconversion of isobutyryl- CoA and n-butyryl-CoA, using radical chemistry. Also exhibits GTPase activity, associated with its G-protein domain (MeaI) that functions as a chaperone that assists cofactor delivery and proper holo-enzyme assembly K01848 - 5.4.99.2 3.39e-290 897.0
DYD1_k127_2563776_20 Involved in the catabolism of homogentisate (2,5- dihydroxyphenylacetate or 2,5-OH-PhAc), a central intermediate in the degradation of phenylalanine and tyrosine. Catalyzes the oxidative ring cleavage of the aromatic ring of homogentisate to yield maleylacetoacetate K00451 GO:0003674,GO:0003824,GO:0008150,GO:0008152,GO:0016491,GO:0055114 1.13.11.5 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001749 559.0
DYD1_k127_2563776_21 Male sterility protein K08679 - 5.1.3.6 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003909 556.0
DYD1_k127_2563776_22 S-acyltransferase activity K00658,K09699 - 2.3.1.168,2.3.1.61 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002718 544.0
DYD1_k127_2563776_23 PFAM Formylglycine-generating sulfatase enzyme - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001165 537.0
DYD1_k127_2563776_24 Fumarylacetoacetate (FAA) hydrolase family - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006279 533.0
DYD1_k127_2563776_25 Belongs to the citrate synthase family K01647,K01659 GO:0003674,GO:0003824,GO:0004108,GO:0006082,GO:0006091,GO:0006113,GO:0006629,GO:0006631,GO:0008150,GO:0008152,GO:0009987,GO:0015980,GO:0016740,GO:0016746,GO:0016829,GO:0016830,GO:0016833,GO:0016999,GO:0017144,GO:0019541,GO:0019679,GO:0019752,GO:0032787,GO:0036440,GO:0043436,GO:0044237,GO:0044238,GO:0044255,GO:0044281,GO:0046459,GO:0046912,GO:0050440,GO:0055114,GO:0071704 2.3.3.1,2.3.3.5 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005163 511.0
DYD1_k127_2563776_26 - - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002763 498.0
DYD1_k127_2563776_27 deoxyhypusine monooxygenase activity - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003603 491.0
DYD1_k127_2563776_28 Rieske (2fe-2S) - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006436 498.0
DYD1_k127_2563776_29 Metallo-beta-lactamase superfamily - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001281 466.0
DYD1_k127_2563776_3 AMP-dependent synthetase and ligase K01895 - 6.2.1.1 6.665e-273 854.0
DYD1_k127_2563776_30 Evidence 4 Homologs of previously reported genes of - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006411 462.0
DYD1_k127_2563776_31 Formiminotransferase domain K00603,K01746,K13990 - 2.1.2.5,4.3.1.4 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008256 436.0
DYD1_k127_2563776_32 3-hydroxyacyl-CoA dehydrogenase K00074,K01782 - 1.1.1.157,1.1.1.35,4.2.1.17,5.1.2.3 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002105 419.0
DYD1_k127_2563776_33 helix_turn_helix, Lux Regulon - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001121 410.0
DYD1_k127_2563776_34 mannose-ethanolamine phosphotransferase activity - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001969 415.0
DYD1_k127_2563776_35 Evidence 4 Homologs of previously reported genes of - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000376 418.0
DYD1_k127_2563776_36 alcohol dehydrogenase K13953 - 1.1.1.1 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002231 413.0
DYD1_k127_2563776_37 hmm pf02371 K07486 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004492 399.0
DYD1_k127_2563776_38 Evidence 4 Homologs of previously reported genes of - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002937 387.0
DYD1_k127_2563776_39 deoxyhypusine monooxygenase activity - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004345 385.0
DYD1_k127_2563776_4 Evidence 3 Function proposed based on presence of conserved amino acid motif, structural feature or limited homology - - - 4.695e-271 849.0
DYD1_k127_2563776_40 uroporphyrinogen-III synthase activity K01719,K13542 - 2.1.1.107,4.2.1.75 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001448 354.0
DYD1_k127_2563776_41 methylisocitrate lyase activity K03417 GO:0000287,GO:0003674,GO:0003824,GO:0005488,GO:0006082,GO:0006091,GO:0006113,GO:0006629,GO:0006631,GO:0008150,GO:0008152,GO:0009056,GO:0009062,GO:0009987,GO:0015980,GO:0016042,GO:0016054,GO:0016829,GO:0016830,GO:0016833,GO:0016999,GO:0017001,GO:0017144,GO:0019541,GO:0019543,GO:0019626,GO:0019629,GO:0019752,GO:0032787,GO:0042737,GO:0043167,GO:0043169,GO:0043436,GO:0044237,GO:0044238,GO:0044242,GO:0044248,GO:0044255,GO:0044281,GO:0044282,GO:0046395,GO:0046421,GO:0046459,GO:0046872,GO:0055114,GO:0071704,GO:0072329,GO:1901575 4.1.3.30 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002478 353.0
DYD1_k127_2563776_42 DNA repair enzyme that has both DNA N-glycosylase activity and AP-lyase activity. The DNA N-glycosylase activity releases various damaged pyrimidines from DNA by cleaving the N- glycosidic bond, leaving an AP (apurinic apyrimidinic) site. The AP-lyase activity cleaves the phosphodiester bond 3' to the AP site by a beta-elimination, leaving a 3'-terminal unsaturated sugar and a product with a terminal 5'-phosphate K01142,K10773 GO:0000702,GO:0000703,GO:0003674,GO:0003824,GO:0006139,GO:0006259,GO:0006281,GO:0006284,GO:0006285,GO:0006289,GO:0006296,GO:0006725,GO:0006807,GO:0006950,GO:0006974,GO:0008150,GO:0008152,GO:0009987,GO:0016787,GO:0016798,GO:0016799,GO:0019104,GO:0033554,GO:0033683,GO:0034641,GO:0043170,GO:0044237,GO:0044238,GO:0044260,GO:0046483,GO:0050896,GO:0051716,GO:0071704,GO:0090304,GO:0090305,GO:0140097,GO:1901360 3.1.11.2,4.2.99.18 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001214 343.0
DYD1_k127_2563776_43 Ring cyclization and eight-electron oxidation of 3a-(2- amino-2-carboxyethyl)-4,5-dioxo-4,5,6,7,8,9-hexahydroquinoline- 7,9-dicarboxylic-acid to PQQ K06137 - 1.3.3.11 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006897 332.0
DYD1_k127_2563776_44 isobutyryl-CoA mutase activity K07588 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000027 327.0
DYD1_k127_2563776_45 Belongs to the sulfur carrier protein TusA family K04085 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001646 314.0
DYD1_k127_2563776_46 orotate phosphoribosyltransferase activity K00762 - 2.4.2.10 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002011 314.0
DYD1_k127_2563776_47 response regulator K02479,K07685 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002496 309.0
DYD1_k127_2563776_48 NADPH:quinone reductase activity - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002554 310.0
DYD1_k127_2563776_49 4-Hydroxyphenylpyruvate dioxygenase K05606,K17315 - 5.1.99.1 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001271 302.0
DYD1_k127_2563776_5 N-acetylphosphatidylethanolamine-hydrolysing phospholipas activity - - - 6.538e-255 796.0
DYD1_k127_2563776_50 antisigma factor binding K03598 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008748 299.0
DYD1_k127_2563776_51 amine dehydrogenase activity - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000004873 302.0
DYD1_k127_2563776_52 YceI-like domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000007752 293.0
DYD1_k127_2563776_53 His Kinase A (phosphoacceptor) domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000001075 279.0
DYD1_k127_2563776_54 Enoyl-CoA hydratase/isomerase K13767,K13816 - 4.2.1.17 0.000000000000000000000000000000000000000000000000000000000000000000000000003439 264.0
DYD1_k127_2563776_56 binds to the 23S rRNA K02939 GO:0003674,GO:0003676,GO:0003723,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0006412,GO:0006518,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0015934,GO:0019538,GO:0022625,GO:0022626,GO:0032991,GO:0034641,GO:0034645,GO:0043043,GO:0043170,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:0071704,GO:0097159,GO:1901363,GO:1901564,GO:1901566,GO:1901576,GO:1990904 - 0.0000000000000000000000000000000000000000000000000000000000000000000287 236.0
DYD1_k127_2563776_57 Belongs to the sulfur carrier protein TusA family - - - 0.00000000000000000000000000000000000000000000000000000000000000000008792 233.0
DYD1_k127_2563776_58 Rubredoxin-like zinc ribbon domain (DUF35_N) K07068 - - 0.000000000000000000000000000000000000000000000000000000000000000005567 228.0
DYD1_k127_2563776_59 energy transducer activity K03407,K03832 - 2.7.13.3 0.0000000000000000000000000000000000000000000000000000000000000002158 232.0
DYD1_k127_2563776_6 Catalyzes the reversible interconversion of serine and glycine with tetrahydrofolate (THF) serving as the one-carbon carrier. This reaction serves as the major source of one-carbon groups required for the biosynthesis of purines, thymidylate, methionine, and other important biomolecules. Also exhibits THF- independent aldolase activity toward beta-hydroxyamino acids, producing glycine and aldehydes, via a retro-aldol mechanism K00600 - 2.1.2.1 2.529e-236 737.0
DYD1_k127_2563776_60 Negatively regulates transcription of bacterial ribonucleotide reductase nrd genes and operons by binding to NrdR- boxes K07738 - - 0.0000000000000000000000000000000000000000000000000000000000000007255 222.0
DYD1_k127_2563776_61 lactoylglutathione lyase activity - - - 0.0000000000000000000000000000000000000000000000000000000000153 209.0
DYD1_k127_2563776_62 - - - - 0.0000000000000000000000000000000000000000000000000000001006 198.0
DYD1_k127_2563776_63 PFAM cobalamin B12-binding domain protein K01849 - 5.4.99.2 0.00000000000000000000000000000000000000000000000000001692 190.0
DYD1_k127_2563776_66 Sulfurtransferase TusA - - - 0.000000000000000000000000000000000000000003835 156.0
DYD1_k127_2563776_67 23S rRNA-intervening sequence protein - - - 0.000000000000000000000000000000000003885 140.0
DYD1_k127_2563776_69 PilZ domain K02676 - - 0.0000000000000000000000000000000111 134.0
DYD1_k127_2563776_7 Evidence 4 Homologs of previously reported genes of - - - 4.428e-229 723.0
DYD1_k127_2563776_71 Belongs to the bacterial ribosomal protein bS21 family K02970 GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005840,GO:0032991,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044446,GO:0044464,GO:1990904 - 0.0000000000000000000000000009203 113.0
DYD1_k127_2563776_72 AAA domain - - - 0.000000000000000000176 90.0
DYD1_k127_2563776_73 - - - - 0.0000000000000001539 90.0
DYD1_k127_2563776_74 - - - - 0.0000000000000001692 85.0
DYD1_k127_2563776_75 - - - - 0.0000000000002867 79.0
DYD1_k127_2563776_76 Protein of unknown function (DUF433) - - - 0.000000000001798 71.0
DYD1_k127_2563776_77 conserved protein (DUF2081) - - - 0.000000000002947 69.0
DYD1_k127_2563776_8 spermidine synthase activity K00797 - 2.5.1.16 3.261e-218 688.0
DYD1_k127_2563776_9 Belongs to the UDP-glucose GDP-mannose dehydrogenase family K00012 - 1.1.1.22 1.234e-217 681.0
DYD1_k127_2565963_0 ferroxidase activity K03594 GO:0006873,GO:0006875,GO:0006879,GO:0006880,GO:0008150,GO:0009987,GO:0019725,GO:0030003,GO:0042592,GO:0046916,GO:0048878,GO:0050801,GO:0051179,GO:0051235,GO:0051238,GO:0051641,GO:0051651,GO:0055065,GO:0055072,GO:0055076,GO:0055080,GO:0055082,GO:0065007,GO:0065008,GO:0097577,GO:0098771 1.16.3.1 0.00000000000000000000000000000000000000000000000000000000000000000000000000002763 262.0
DYD1_k127_2565963_1 Outer membrane protease K01355,K08477,K08566,K13520 GO:0003674,GO:0003824,GO:0004175,GO:0004252,GO:0005575,GO:0005623,GO:0006508,GO:0006807,GO:0008150,GO:0008152,GO:0008233,GO:0008236,GO:0009279,GO:0016020,GO:0016787,GO:0017171,GO:0019538,GO:0019867,GO:0030312,GO:0030313,GO:0031224,GO:0031230,GO:0031975,GO:0043170,GO:0044238,GO:0044425,GO:0044462,GO:0044464,GO:0070011,GO:0071704,GO:0071944,GO:0140096,GO:1901564 3.4.23.48,3.4.23.49 0.00000000000000000000000000000000000000000000000000000000001031 220.0
DYD1_k127_2565963_2 - - - - 0.00000000000000000000000000000000000000000000000003628 183.0
DYD1_k127_2566661_0 drug transmembrane transporter activity K03327 - - 9.841e-204 641.0
DYD1_k127_2566661_1 - K02600 GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006355,GO:0008150,GO:0009889,GO:0010468,GO:0010556,GO:0019219,GO:0019222,GO:0031323,GO:0031326,GO:0031554,GO:0031564,GO:0043244,GO:0044424,GO:0044444,GO:0044464,GO:0050789,GO:0050794,GO:0051128,GO:0051171,GO:0051252,GO:0060255,GO:0065007,GO:0080090,GO:1903506,GO:2000112,GO:2001141 - 5.822e-200 635.0
DYD1_k127_2566661_2 tRNA thio-modification K03151 GO:0000049,GO:0002937,GO:0003674,GO:0003676,GO:0003723,GO:0003824,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006139,GO:0006396,GO:0006399,GO:0006400,GO:0006725,GO:0006766,GO:0006767,GO:0006772,GO:0006790,GO:0006807,GO:0008033,GO:0008150,GO:0008152,GO:0009058,GO:0009110,GO:0009228,GO:0009451,GO:0009987,GO:0010467,GO:0016070,GO:0017144,GO:0018130,GO:0019438,GO:0034227,GO:0034470,GO:0034641,GO:0034660,GO:0042364,GO:0042723,GO:0042724,GO:0043170,GO:0043412,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044272,GO:0044281,GO:0044283,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0071704,GO:0072527,GO:0072528,GO:0090304,GO:0097159,GO:1901360,GO:1901362,GO:1901363,GO:1901564,GO:1901566,GO:1901576 2.8.1.4 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005425 380.0
DYD1_k127_2566661_3 Methyltransferase domain - - - 0.0000000000000000000000000000001891 133.0
DYD1_k127_2566661_4 EthD domain - - - 0.000000000000000005052 86.0
DYD1_k127_2566661_5 EthD domain - - - 0.00000000028 65.0
DYD1_k127_2571402_0 PFAM FAD-dependent pyridine nucleotide-disulphide oxidoreductase K03885 - 1.6.99.3 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008737 357.0
DYD1_k127_2571402_1 Condenses 4-methyl-5-(beta-hydroxyethyl)thiazole monophosphate (THZ-P) and 2-methyl-4-amino-5-hydroxymethyl pyrimidine pyrophosphate (HMP-PP) to form thiamine monophosphate (TMP) K00788 - 2.5.1.3 0.00000000000000000000000000000000000000000000000000000000000000000000000006315 255.0
DYD1_k127_2571402_2 Catalyzes a mechanistically unusual reaction, the ATP- dependent insertion of CO2 between the N7 and N8 nitrogen atoms of 7,8-diaminopelargonic acid (DAPA) to form an ureido ring K00652,K01935 GO:0000166,GO:0000287,GO:0003674,GO:0003824,GO:0004141,GO:0005488,GO:0005524,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006082,GO:0006732,GO:0006766,GO:0006767,GO:0006768,GO:0006790,GO:0006807,GO:0008144,GO:0008150,GO:0008152,GO:0009058,GO:0009102,GO:0009108,GO:0009110,GO:0009987,GO:0016053,GO:0016874,GO:0016879,GO:0016882,GO:0017076,GO:0017144,GO:0018130,GO:0019752,GO:0030554,GO:0032553,GO:0032555,GO:0032559,GO:0032787,GO:0034641,GO:0035639,GO:0036094,GO:0042364,GO:0043167,GO:0043168,GO:0043169,GO:0043436,GO:0043603,GO:0043604,GO:0044237,GO:0044249,GO:0044271,GO:0044272,GO:0044281,GO:0044283,GO:0044424,GO:0044444,GO:0044464,GO:0046394,GO:0046483,GO:0046872,GO:0051186,GO:0051188,GO:0071704,GO:0072330,GO:0097159,GO:0097367,GO:1901265,GO:1901360,GO:1901362,GO:1901363,GO:1901564,GO:1901566,GO:1901576 2.3.1.47,6.3.3.3 0.00000000000000000000000000000000000003163 153.0
DYD1_k127_2571402_3 Belongs to the P-Pant transferase superfamily K06133 - - 0.0000000000000000000000000000001845 133.0
DYD1_k127_257785_0 thus facilitating recognition of the initiation point. It is needed to translate mRNA with a short Shine-Dalgarno (SD) purine-rich sequence K02945 - - 2.43e-321 988.0
DYD1_k127_257785_1 glutamate dehydrogenase [NAD(P)+] activity K00261,K00262 - 1.4.1.3,1.4.1.4 2.112e-227 709.0
DYD1_k127_257785_10 Proto-chlorophyllide reductase 57 kD subunit - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005981 486.0
DYD1_k127_257785_11 Prephenate dehydrogenase K04517 - 1.3.1.12 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005064 460.0
DYD1_k127_257785_12 Peptidase family S49 K04773 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002517 433.0
DYD1_k127_257785_13 Transcriptional regulator - GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0044424,GO:0044444,GO:0044464 - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002493 430.0
DYD1_k127_257785_14 Proto-chlorophyllide reductase 57 kd subunit - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001804 391.0
DYD1_k127_257785_15 Belongs to the peptidase S11 family K07258 - 3.4.16.4 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005355 384.0
DYD1_k127_257785_16 sulfate adenylyltransferase (ATP) activity K00860,K00955,K00956 - 2.7.1.25,2.7.7.4 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000276 325.0
DYD1_k127_257785_17 Belongs to the cytidylate kinase family. Type 1 subfamily K00945 GO:0003674,GO:0003824,GO:0004127,GO:0004592,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006082,GO:0006139,GO:0006520,GO:0006573,GO:0006575,GO:0006725,GO:0006732,GO:0006753,GO:0006766,GO:0006767,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009081,GO:0009108,GO:0009110,GO:0009117,GO:0009123,GO:0009165,GO:0009987,GO:0015939,GO:0015940,GO:0016053,GO:0016301,GO:0016310,GO:0016740,GO:0016772,GO:0016776,GO:0016874,GO:0016879,GO:0016881,GO:0018130,GO:0019205,GO:0019438,GO:0019637,GO:0019752,GO:0032787,GO:0033317,GO:0034641,GO:0034654,GO:0042364,GO:0042398,GO:0043436,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0044283,GO:0044424,GO:0044444,GO:0044464,GO:0046394,GO:0046483,GO:0046939,GO:0046940,GO:0050145,GO:0051186,GO:0051188,GO:0055086,GO:0071704,GO:0072330,GO:0090407,GO:1901293,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576,GO:1901605 2.7.4.25 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000007532 278.0
DYD1_k127_257785_18 Phosphate acyltransferases K00655 - 2.3.1.51 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000428 276.0
DYD1_k127_257785_2 Catalyzes the transfer of the enolpyruvyl moiety of phosphoenolpyruvate (PEP) to the 5-hydroxyl of shikimate-3- phosphate (S3P) to produce enolpyruvyl shikimate-3-phosphate and inorganic phosphate K00800 GO:0003674,GO:0003824,GO:0003866,GO:0006082,GO:0008150,GO:0008152,GO:0009058,GO:0009423,GO:0009987,GO:0016053,GO:0016740,GO:0016765,GO:0019752,GO:0043436,GO:0043648,GO:0043650,GO:0044237,GO:0044249,GO:0044281,GO:0044283,GO:0046394,GO:0046417,GO:0071704,GO:1901576 2.5.1.19 4.668e-202 637.0
DYD1_k127_257785_20 The RuvA-RuvB complex in the presence of ATP renatures cruciform structure in supercoiled DNA with palindromic sequence, indicating that it may promote strand exchange reactions in homologous recombination. RuvAB is a helicase that mediates the Holliday junction migration by localized denaturation and reannealing. RuvA stimulates, in the presence of DNA, the weak ATPase activity of RuvB K03550 - 3.6.4.12 0.000000000000000000000000000000000000000000000000000000000000000000002182 240.0
DYD1_k127_257785_21 Membrane - - - 0.0000000000000000000000000000000000000000000000000000000000003092 221.0
DYD1_k127_257785_22 lipoyl(octanoyl) transferase activity K03644,K03801 GO:0003674,GO:0003824,GO:0006082,GO:0006464,GO:0006629,GO:0006631,GO:0006633,GO:0006732,GO:0006790,GO:0006807,GO:0008150,GO:0008152,GO:0008610,GO:0009058,GO:0009106,GO:0009107,GO:0009108,GO:0009249,GO:0009892,GO:0009987,GO:0010467,GO:0010468,GO:0010605,GO:0010629,GO:0016053,GO:0016415,GO:0016740,GO:0016746,GO:0016747,GO:0016772,GO:0016779,GO:0016874,GO:0016879,GO:0016979,GO:0018065,GO:0018130,GO:0018193,GO:0018205,GO:0019222,GO:0019538,GO:0019752,GO:0032787,GO:0033819,GO:0036211,GO:0043170,GO:0043412,GO:0043436,GO:0044237,GO:0044238,GO:0044249,GO:0044255,GO:0044260,GO:0044267,GO:0044272,GO:0044281,GO:0044283,GO:0046394,GO:0046483,GO:0048519,GO:0050789,GO:0051186,GO:0051188,GO:0051604,GO:0060255,GO:0065007,GO:0071704,GO:0072330,GO:0140096,GO:1901360,GO:1901362,GO:1901564,GO:1901576 2.3.1.181,2.8.1.8 0.0000000000000000000000000000000000000000000000000000000000004261 222.0
DYD1_k127_257785_24 prohibitin homologues - - - 0.000000000000000000000000000000000000000000000000000000008729 200.0
DYD1_k127_257785_25 bacterial (prokaryotic) histone like domain K05788 - - 0.00000000000000000000000000000000000000000000000204 175.0
DYD1_k127_257785_27 COG2346, Truncated hemoglobins K06886 - - 0.00000000000000000000000000000000000000000003487 168.0
DYD1_k127_257785_3 NeuB family K03856 - 2.5.1.54 2.616e-200 626.0
DYD1_k127_257785_4 Chorismate mutase type II K14170 - 4.2.1.51,5.4.99.5 3.273e-196 616.0
DYD1_k127_257785_5 amine dehydrogenase activity - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000709 579.0
DYD1_k127_257785_6 The RuvA-RuvB complex in the presence of ATP renatures cruciform structure in supercoiled DNA with palindromic sequence, indicating that it may promote strand exchange reactions in homologous recombination. RuvAB is a helicase that mediates the Holliday junction migration by localized denaturation and reannealing K03551 - 3.6.4.12 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002218 548.0
DYD1_k127_257785_7 Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released K03086 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002165 533.0
DYD1_k127_257785_8 Belongs to the class-II pyridoxal-phosphate-dependent aminotransferase family. Histidinol-phosphate aminotransferase subfamily K00817 - 2.6.1.9 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001035 522.0
DYD1_k127_257785_9 protein tyrosine kinase activity K03593 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001289 501.0
DYD1_k127_2580369_0 Sodium/hydrogen exchanger family - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005787 480.0
DYD1_k127_2580369_1 domain, Protein - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004101 359.0
DYD1_k127_2580369_2 AI-2E family transporter - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000001644 306.0
DYD1_k127_2580369_3 Protein of unknown function (DUF664) - - - 0.000000000000000000000000000000000000000000000000000000000004339 212.0
DYD1_k127_2580369_4 Phosphoesterase K07095 - - 0.00000000000000000000000000000000002158 138.0
DYD1_k127_2580369_5 - - - - 0.00000000000001036 78.0
DYD1_k127_2594278_0 - - - - 0.000000000000000000000000000001363 133.0
DYD1_k127_2594278_1 PFAM Peptidase family M48 - - - 0.00000000000000007952 88.0
DYD1_k127_2594278_2 BON domain - - - 0.000000000000281 73.0
DYD1_k127_2643490_0 Evidence 2a Function of homologous gene experimentally demonstrated in an other organism K06147,K11085 - - 1.156e-259 811.0
DYD1_k127_2643490_1 Glycosyltransferase family 9 (heptosyltransferase) K02843 - - 3.235e-219 696.0
DYD1_k127_2643490_10 Domain of unknown function (DUF374) K09778 - - 0.0000000000000000000000000000000000000000000000000000000000000002446 226.0
DYD1_k127_2643490_11 Catalyzes the synthesis of activated sulfate K00958 - 2.7.7.4 0.00000000000000000000000000000000000000000000001032 176.0
DYD1_k127_2643490_12 Glycosyltransferase family 9 (heptosyltransferase) K02843 - - 0.0000000000000000000000000000000000000000000000394 186.0
DYD1_k127_2643490_13 Transcription termination factor nusG - - - 0.000000000000000000000000000000000000000000006888 168.0
DYD1_k127_2643490_14 Winged helix-turn-helix DNA-binding - - - 0.0000000000000000000000000000000000006868 146.0
DYD1_k127_2643490_15 23S rRNA-intervening sequence protein - - - 0.00000000000000000000000000000003021 130.0
DYD1_k127_2643490_2 Belongs to the DegT DnrJ EryC1 family - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001993 484.0
DYD1_k127_2643490_3 3-Deoxy-D-manno-octulosonic-acid transferase (kdotransferase) K02527 - 2.4.99.12,2.4.99.13,2.4.99.14,2.4.99.15 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002435 484.0
DYD1_k127_2643490_4 Oxidoreductase family, NAD-binding Rossmann fold - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005192 438.0
DYD1_k127_2643490_5 Involved in the biosynthesis of lipid A, a phosphorylated glycolipid that anchors the lipopolysaccharide to the outer membrane of the cell K00677 - 2.3.1.129 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001599 432.0
DYD1_k127_2643490_6 Protein of unknown function (DUF1009) K09949 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000315 414.0
DYD1_k127_2643490_7 Glycosyltransferase family 9 (heptosyltransferase) K02841,K02843 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000634 377.0
DYD1_k127_2643490_8 Transfers the gamma-phosphate of ATP to the 4'-position of a tetraacyldisaccharide 1-phosphate intermediate (termed DS-1- P) to form tetraacyldisaccharide 1,4'-bis-phosphate (lipid IVA) K00912 - 2.7.1.130 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001649 348.0
DYD1_k127_2643490_9 Condensation of UDP-2,3-diacylglucosamine and 2,3- diacylglucosamine-1-phosphate to form lipid A disaccharide, a precursor of lipid A, a phosphorylated glycolipid that anchors the lipopolysaccharide to the outer membrane of the cell K00748 GO:0003674,GO:0005488,GO:0005543,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005975,GO:0006629,GO:0006643,GO:0006644,GO:0006664,GO:0006793,GO:0006796,GO:0008150,GO:0008152,GO:0008289,GO:0008610,GO:0008654,GO:0009058,GO:0009245,GO:0009247,GO:0009311,GO:0009312,GO:0009987,GO:0016051,GO:0019637,GO:0043167,GO:0043168,GO:0044237,GO:0044238,GO:0044249,GO:0044255,GO:0044424,GO:0044444,GO:0044464,GO:0046467,GO:0046493,GO:0071704,GO:0090407,GO:1901135,GO:1901137,GO:1901269,GO:1901271,GO:1901576,GO:1903509 2.4.1.182 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000002032 288.0
DYD1_k127_2645830_0 Belongs to the PEP-utilizing enzyme family K01006 - 2.7.9.1 0.0 1511.0
DYD1_k127_2645830_1 Protein involved in outer membrane biogenesis K07290 - - 0.0 1217.0
DYD1_k127_2645830_10 LPP20 lipoprotein - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005118 443.0
DYD1_k127_2645830_11 S-adenosylmethionine-dependent methyltransferase K06969 - 2.1.1.191 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001977 408.0
DYD1_k127_2645830_12 Converts 2,5-diamino-6-(ribosylamino)-4(3h)-pyrimidinone 5'-phosphate into 5-amino-6-(ribosylamino)-2,4(1h,3h)- pyrimidinedione 5'-phosphate K11752 - 1.1.1.193,3.5.4.26 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001426 363.0
DYD1_k127_2645830_13 response to heat K07090 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000165 329.0
DYD1_k127_2645830_14 B-1 B cell differentiation - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001291 327.0
DYD1_k127_2645830_15 helix_turn_helix, cAMP Regulatory protein - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002272 323.0
DYD1_k127_2645830_16 Lumazine binding domain K00793 - 2.5.1.9 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002844 319.0
DYD1_k127_2645830_17 Peptidoglycan-synthase activator LpoB K07337 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000426 318.0
DYD1_k127_2645830_18 - - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000001573 296.0
DYD1_k127_2645830_2 Catalyzes the conversion of acetate into acetyl-CoA (AcCoA), an essential intermediate at the junction of anabolic and catabolic pathways. AcsA undergoes a two-step reaction. In the first half reaction, AcsA combines acetate with ATP to form acetyl-adenylate (AcAMP) intermediate. In the second half reaction, it can then transfer the acetyl group from AcAMP to the sulfhydryl group of CoA, forming the product AcCoA K01895 - 6.2.1.1 0.0 1138.0
DYD1_k127_2645830_20 Toxic component of a toxin-antitoxin (TA) module. An RNase K07064 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000002188 252.0
DYD1_k127_2645830_21 2 iron, 2 sulfur cluster binding K13643 - - 0.000000000000000000000000000000000000000000000000000000000001533 212.0
DYD1_k127_2645830_22 Cupin 2, conserved barrel domain protein - - - 0.000000000000000000000000000000000000000000000000001017 185.0
DYD1_k127_2645830_23 Cytochrome c - - - 0.0000000000000000000000000000000000000000006324 162.0
DYD1_k127_2645830_24 TIGRFAM 40-residue YVTN family beta-propeller repeat protein - - - 0.000000000000000000000000000000000000000341 166.0
DYD1_k127_2645830_27 Hep Hag repeat protein - - - 0.00000000000000000002757 102.0
DYD1_k127_2645830_3 Transketolase, pyrimidine binding domain K00615 - 2.2.1.1 0.0 1008.0
DYD1_k127_2645830_31 copper ion binding - - - 0.00000008603 64.0
DYD1_k127_2645830_4 Glycyl-tRNA synthetase beta subunit K01879 - 6.1.1.14 2.096e-256 812.0
DYD1_k127_2645830_5 Metallopeptidase family M24 K01262 - 3.4.11.9 1.111e-196 617.0
DYD1_k127_2645830_6 MFS_1 like family - - - 9.224e-196 616.0
DYD1_k127_2645830_7 protein conserved in bacteria K09859 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001157 604.0
DYD1_k127_2645830_8 phospholipase Carboxylesterase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001425 543.0
DYD1_k127_2645830_9 Glycyl-tRNA synthetase alpha subunit K01878 - 6.1.1.14 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007586 511.0
DYD1_k127_266830_0 transposition K07497 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000006217 275.0
DYD1_k127_266830_1 Sodium/hydrogen exchanger family K03316 - - 0.0000000000000000000000000000005066 125.0
DYD1_k127_266830_2 PFAM sodium hydrogen exchanger K03316 - - 0.0000000000000307 76.0
DYD1_k127_2676994_0 Sigma-54 interaction domain - - - 2.494e-198 633.0
DYD1_k127_2676994_1 Alpha beta hydrolase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000257 444.0
DYD1_k127_2676994_10 Domain of unknown function (DUF4383) - - - 0.00000000000000000000000000000000005849 142.0
DYD1_k127_2676994_11 Belongs to the thioredoxin family K03671 - - 0.0000000000000000000000000000000001047 136.0
DYD1_k127_2676994_12 PFAM blue (type 1) copper domain protein - - - 0.00000000000000000001181 95.0
DYD1_k127_2676994_13 4-oxalocrotonate tautomerase K01821 - 5.3.2.6 0.00000007383 58.0
DYD1_k127_2676994_2 Domain present in phytochromes and cGMP-specific phosphodiesterases. - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001276 409.0
DYD1_k127_2676994_3 Involved in the biosynthesis of the chorismate, which leads to the biosynthesis of aromatic amino acids. Catalyzes the reversible NADPH linked reduction of 3-dehydroshikimate (DHSA) to yield shikimate (SA) K00014 GO:0000166,GO:0003674,GO:0003824,GO:0004764,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006082,GO:0008150,GO:0008152,GO:0009058,GO:0009423,GO:0009987,GO:0016053,GO:0016491,GO:0016614,GO:0016616,GO:0019632,GO:0019752,GO:0032787,GO:0036094,GO:0043436,GO:0043648,GO:0043650,GO:0044237,GO:0044249,GO:0044281,GO:0044283,GO:0044424,GO:0044444,GO:0044464,GO:0046394,GO:0046417,GO:0048037,GO:0050661,GO:0050662,GO:0055114,GO:0071704,GO:0097159,GO:1901265,GO:1901363,GO:1901576,GO:1901615 1.1.1.25 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001309 378.0
DYD1_k127_2676994_4 Catalyzes the specific phosphorylation of the 3-hydroxyl group of shikimic acid using ATP as a cosubstrate K00891 GO:0000287,GO:0003674,GO:0003824,GO:0004765,GO:0005488,GO:0006082,GO:0006520,GO:0006725,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0008652,GO:0009058,GO:0009072,GO:0009073,GO:0009987,GO:0016053,GO:0016301,GO:0016310,GO:0016740,GO:0016772,GO:0016773,GO:0019438,GO:0019632,GO:0019752,GO:0032787,GO:0043167,GO:0043169,GO:0043436,GO:0044237,GO:0044238,GO:0044249,GO:0044281,GO:0044283,GO:0046394,GO:0046872,GO:0071704,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576,GO:1901615 2.7.1.71 0.00000000000000000000000000000000000000000000000000000000000000000001994 237.0
DYD1_k127_2676994_5 Protein of unknown function (DUF1348) K09958 - - 0.000000000000000000000000000000000000000000000000000000000003798 211.0
DYD1_k127_2676994_6 Cytochrome P460 - - - 0.000000000000000000000000000000000000000000000000000006749 197.0
DYD1_k127_2676994_7 Domain of unknown function (DUF4142) K08995 - - 0.000000000000000000000000000000000000000000000000454 181.0
DYD1_k127_2676994_8 YHS domain - - - 0.00000000000000000000000000000000000000000000006773 173.0
DYD1_k127_2676994_9 molybdenum ion binding K07140 - - 0.00000000000000000000000000000000000000878 148.0
DYD1_k127_2680523_0 PFAM ATP-binding region, ATPase domain protein domain protein - - - 0.00000000000000000000000000000000000000000000000000000000000000000005787 256.0
DYD1_k127_2680523_1 His Kinase A (phosphoacceptor) domain - - - 0.0000000000000000000000000000000000000000000000000000001494 201.0
DYD1_k127_2680523_2 Diguanylate cyclase phosphodiesterase with PAS PAC - - - 0.0000000000000000000000000000000000000000004642 179.0
DYD1_k127_2680523_3 calcium- and calmodulin-responsive adenylate cyclase activity - - - 0.00000122 57.0
DYD1_k127_2701135_0 Facilitates transcription termination by a mechanism that involves Rho binding to the nascent RNA, activation of Rho's RNA-dependent ATPase activity, and release of the mRNA from the DNA template K03628 - - 6.997e-269 829.0
DYD1_k127_2701135_1 Pyruvate:ferredoxin oxidoreductase core domain II K00169 - 1.2.7.1 1.835e-257 794.0
DYD1_k127_2701135_10 poly(3-hydroxybutyrate) depolymerase activity K07019 GO:0003674,GO:0003824,GO:0006629,GO:0008150,GO:0008152,GO:0009987,GO:0016787,GO:0016788,GO:0044237,GO:0044238,GO:0044255,GO:0071704 - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001238 430.0
DYD1_k127_2701135_11 Evidence 2a Function of homologous gene experimentally demonstrated in an other organism - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001552 408.0
DYD1_k127_2701135_12 PFAM metal-dependent phosphohydrolase, HD sub domain K01524,K07012 - 3.6.1.11,3.6.1.40 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003682 409.0
DYD1_k127_2701135_13 Histidine biosynthesis protein K01814 GO:0000105,GO:0000162,GO:0003674,GO:0003824,GO:0003949,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006082,GO:0006520,GO:0006547,GO:0006568,GO:0006576,GO:0006586,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0008652,GO:0009058,GO:0009072,GO:0009073,GO:0009308,GO:0009309,GO:0009987,GO:0016053,GO:0016853,GO:0016860,GO:0016861,GO:0018130,GO:0019438,GO:0019752,GO:0034641,GO:0042401,GO:0042430,GO:0042435,GO:0043436,GO:0044106,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0044283,GO:0044424,GO:0044464,GO:0046219,GO:0046394,GO:0046483,GO:0052803,GO:0071704,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576,GO:1901605,GO:1901607 5.3.1.16 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001974 373.0
DYD1_k127_2701135_14 Imidazoleglycerol-phosphate dehydratase K01693 GO:0000105,GO:0003674,GO:0003824,GO:0004424,GO:0006082,GO:0006520,GO:0006547,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0008652,GO:0009058,GO:0009987,GO:0016053,GO:0016829,GO:0016835,GO:0016836,GO:0018130,GO:0019438,GO:0019752,GO:0034641,GO:0043436,GO:0044237,GO:0044238,GO:0044249,GO:0044281,GO:0044283,GO:0046394,GO:0046483,GO:0052803,GO:0071704,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576,GO:1901605,GO:1901607 4.2.1.19 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001721 365.0
DYD1_k127_2701135_15 IGPS catalyzes the conversion of PRFAR and glutamine to IGP, AICAR and glutamate. The HisH subunit provides the glutamine amidotransferase activity that produces the ammonia necessary to HisF for the synthesis of IGP and AICAR K02501 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002301 326.0
DYD1_k127_2701135_16 Catalyzes the condensation of ATP and 5-phosphoribose 1- diphosphate to form N'-(5'-phosphoribosyl)-ATP (PR-ATP). Has a crucial role in the pathway because the rate of histidine biosynthesis seems to be controlled primarily by regulation of HisG enzymatic activity K00765 GO:0000105,GO:0003674,GO:0003824,GO:0003879,GO:0006082,GO:0006520,GO:0006547,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0008652,GO:0009058,GO:0009987,GO:0016053,GO:0016740,GO:0016757,GO:0016763,GO:0018130,GO:0019438,GO:0019752,GO:0034641,GO:0043436,GO:0044237,GO:0044238,GO:0044249,GO:0044281,GO:0044283,GO:0046394,GO:0046483,GO:0052803,GO:0071704,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576,GO:1901605,GO:1901607 2.4.2.17 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000001315 300.0
DYD1_k127_2701135_17 Methylates the class 1 translation termination release factors RF1 PrfA and RF2 PrfB on the glutamine residue of the universally conserved GGQ motif K02493 GO:0003674,GO:0003824,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0008150,GO:0008152,GO:0008168,GO:0008757,GO:0016740,GO:0016741,GO:0032259,GO:0044424,GO:0044444,GO:0044464 2.1.1.297 0.000000000000000000000000000000000000000000000000000000000000000000000000001703 263.0
DYD1_k127_2701135_18 Nodulation protein S (NodS) - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000005509 254.0
DYD1_k127_2701135_2 Catalyzes the sequential NAD-dependent oxidations of L- histidinol to L-histidinaldehyde and then to L-histidine K00013 - 1.1.1.23 1.658e-217 685.0
DYD1_k127_2701135_21 Uncharacterised protein family UPF0047 - - - 0.000000000000000000000000000000000000000000000000000000034 200.0
DYD1_k127_2701135_22 Phosphoribosyl-AMP cyclohydrolase K01496,K11755 - 3.5.4.19,3.6.1.31 0.00000000000000000000000000000000000000000000000000001178 191.0
DYD1_k127_2701135_23 Oxidoreductase - - - 0.0000000000000000000000000000000000000000000000007649 176.0
DYD1_k127_2701135_24 Sigma-70, region 4 K03088 - - 0.00000000000000000000000000000000000000000000004188 176.0
DYD1_k127_2701135_25 Uncharacterized conserved protein (DUF2203) - - - 0.00000000000000000000000000000000000000000000005106 175.0
DYD1_k127_2701135_27 Binds the 23S rRNA K02909 - - 0.00000000000000000000000000000000001192 135.0
DYD1_k127_2701135_28 Histidine kinase K02851 - 2.7.8.33,2.7.8.35 0.00000000000000000000000000000002203 137.0
DYD1_k127_2701135_29 MerR, DNA binding K19591 - - 0.000000000000000000000000000005435 124.0
DYD1_k127_2701135_3 Cell wall formation. Adds enolpyruvyl to UDP-N- acetylglucosamine K00790 - 2.5.1.7 9.242e-197 620.0
DYD1_k127_2701135_30 Thioredoxin domain - - - 0.0000000000000000000000000002589 117.0
DYD1_k127_2701135_31 PFAM nuclease (SNase domain protein) - - - 0.000000000000000000000000002507 119.0
DYD1_k127_2701135_33 Protein of unknown function DUF86 - - - 0.000000000000000000000004461 105.0
DYD1_k127_2701135_34 serine threonine protein kinase - - - 0.0000000000000000000007466 102.0
DYD1_k127_2701135_35 - - - - 0.000000000000000002092 90.0
DYD1_k127_2701135_37 BolA family transcriptional regulator K09780 - - 0.000000000000006469 79.0
DYD1_k127_2701135_38 DNA polymerase beta domain protein region - - - 0.0000000000002033 72.0
DYD1_k127_2701135_39 membrane protein (DUF2078) K08982 - - 0.00000000000136 70.0
DYD1_k127_2701135_4 PFAM Copper resistance D K07245 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006243 608.0
DYD1_k127_2701135_40 Transmembrane anti-sigma factor - - - 0.00000000496 60.0
DYD1_k127_2701135_41 TPR repeat - - - 0.00001082 58.0
DYD1_k127_2701135_42 nuclease - - - 0.00005964 49.0
DYD1_k127_2701135_43 Protein of unknown function DUF86 - - - 0.0001815 45.0
DYD1_k127_2701135_5 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain K00170 - 1.2.7.1 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001223 575.0
DYD1_k127_2701135_6 Evidence 2a Function of homologous gene experimentally demonstrated in an other organism K08070 - 1.3.1.74 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004763 535.0
DYD1_k127_2701135_7 Peptide chain release factor 1 directs the termination of translation in response to the peptide chain termination codons UAG and UAA K02835 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009391 509.0
DYD1_k127_2701135_8 Pyruvate ferredoxin/flavodoxin oxidoreductase K00172 - 1.2.7.1 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002868 447.0
DYD1_k127_2701135_9 IGPS catalyzes the conversion of PRFAR and glutamine to IGP, AICAR and glutamate. The HisF subunit catalyzes the cyclization activity that produces IGP and AICAR from PRFAR using the ammonia provided by the HisH subunit K02500 GO:0000107,GO:0003674,GO:0003824,GO:0016740,GO:0016757,GO:0016763 - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006336 439.0
DYD1_k127_2726068_0 ABC transporter K02003 - - 0.000000000000000000000000000000000000000000002094 167.0
DYD1_k127_2726068_1 4'-phosphopantetheinyl transferase superfamily K00997,K06133 - 2.7.8.7 0.0000000000000000000000000000000000000000000646 163.0
DYD1_k127_2726068_2 protein conserved in bacteria K09928 - - 0.0001357 50.0
DYD1_k127_2736031_0 DNA-binding transcription factor activity K04761 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004134 465.0
DYD1_k127_2736031_1 Endonuclease/Exonuclease/phosphatase family K01142 - 3.1.11.2 0.00000000000000000000000000000000000000000000000000008012 188.0
DYD1_k127_2736031_2 Ferritin-like domain K04047 - - 0.00000000000000000000000000000000000000000000000009372 180.0
DYD1_k127_2752812_0 Metal-dependent hydrolase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008753 447.0
DYD1_k127_2752812_1 uracil-DNA glycosylase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000001041 295.0
DYD1_k127_2752812_2 Cytochrome P460 - - - 0.000000000000000000000000000000000000000000000000000000000000000008583 230.0
DYD1_k127_2752812_3 membrane - - - 0.0000000000000000000000000000000000000000000000000002532 189.0
DYD1_k127_2752812_4 COG1335 Amidases related to nicotinamidase - - - 0.00000000000000000000000000000000000000000005643 166.0
DYD1_k127_2752812_5 nitrite reductase [NAD(P)H] activity K15762 - - 0.000000000000000000000000000004248 122.0
DYD1_k127_2752812_6 Cupin - - - 0.000000000000000000321 93.0
DYD1_k127_2758866_0 Pectate lyase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000005994 261.0
DYD1_k127_2758866_1 - - - - 0.0000000000000000000000000000000000000002645 155.0
DYD1_k127_2758866_2 - - - - 0.00004098 46.0
DYD1_k127_2841223_0 FAD linked oxidases, C-terminal domain K00104 - 1.1.3.15 0.0 1356.0
DYD1_k127_2841223_1 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). K02660 - - 8.79e-213 679.0
DYD1_k127_2841223_10 Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily K02015 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004531 395.0
DYD1_k127_2841223_11 Periplasmic binding protein K02016 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002815 366.0
DYD1_k127_2841223_12 TonB dependent receptor K02014 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004603 372.0
DYD1_k127_2841223_13 - - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005262 320.0
DYD1_k127_2841223_14 ABC transporter K02013 - 3.6.3.34 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000001282 306.0
DYD1_k127_2841223_15 nuclear chromosome segregation K02666,K03497,K19622 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000001315 267.0
DYD1_k127_2841223_16 cob(I)yrinic acid a,c-diamide adenosyltransferase activity K00798,K13821 GO:0000166,GO:0001882,GO:0001883,GO:0003674,GO:0003824,GO:0005488,GO:0005524,GO:0005525,GO:0006725,GO:0006766,GO:0006767,GO:0006807,GO:0008144,GO:0008150,GO:0008152,GO:0009058,GO:0009110,GO:0009235,GO:0009236,GO:0009987,GO:0016043,GO:0016740,GO:0016765,GO:0017076,GO:0017144,GO:0018130,GO:0019001,GO:0019003,GO:0019438,GO:0019538,GO:0022607,GO:0030091,GO:0030554,GO:0032549,GO:0032550,GO:0032553,GO:0032555,GO:0032559,GO:0032561,GO:0033013,GO:0033014,GO:0034641,GO:0035639,GO:0036094,GO:0042364,GO:0043167,GO:0043168,GO:0043170,GO:0043933,GO:0044085,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044281,GO:0044283,GO:0046483,GO:0051186,GO:0051188,GO:0051259,GO:0051260,GO:0065003,GO:0070206,GO:0070207,GO:0071704,GO:0071840,GO:0097159,GO:0097367,GO:1901265,GO:1901360,GO:1901362,GO:1901363,GO:1901564,GO:1901566,GO:1901576 1.2.1.88,1.5.5.2,2.5.1.17 0.000000000000000000000000000000000000000000000000000000000000000000000000008042 256.0
DYD1_k127_2841223_17 cheY-homologous receiver domain K02658 - - 0.0000000000000000000000000000000000000000000000000000000000000000003354 229.0
DYD1_k127_2841223_18 peptidyl-tyrosine sulfation - - - 0.0000000000000000000000000000000000000000000000000000000000002117 229.0
DYD1_k127_2841223_19 PFAM metal-dependent phosphohydrolase, HD sub domain K01524 - 3.6.1.11,3.6.1.40 0.000000000000000000000000000000000000000000000000002211 194.0
DYD1_k127_2841223_2 Catalyzes the condensation reaction of fatty acid synthesis by the addition to an acyl acceptor of two carbons from malonyl-ACP K09458 - 2.3.1.179 9.95e-205 644.0
DYD1_k127_2841223_21 chemotaxis K03408,K03415 - - 0.00000000000000000000000000000000000001062 151.0
DYD1_k127_2841223_22 'Cold-shock' DNA-binding domain K03704 - - 0.000000000000000000000000000000000001008 139.0
DYD1_k127_2841223_23 chemotaxis K02659,K03408,K03415,K11524 - - 0.00000000000000000000000000006222 121.0
DYD1_k127_2841223_24 Carrier of the growing fatty acid chain in fatty acid biosynthesis K02078,K05553 - - 0.00000000000000000000000002206 113.0
DYD1_k127_2841223_25 ATP-dependent helicase HrpB K03579 - 3.6.4.13 0.0000000000000000000000002189 105.0
DYD1_k127_2841223_26 Belongs to the bacterial ribosomal protein bL28 family K02902 - - 0.000000000000000000000002002 104.0
DYD1_k127_2841223_3 peptidyl-tyrosine sulfation - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001157 589.0
DYD1_k127_2841223_4 PFAM metal-dependent phosphohydrolase, HD sub domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006429 589.0
DYD1_k127_2841223_5 Signal transducing histidine kinase, homodimeric domain K02487,K03407,K06596 - 2.7.13.3 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001165 522.0
DYD1_k127_2841223_6 Predicted permease YjgP/YjgQ family K07091 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008369 476.0
DYD1_k127_2841223_7 Catalyzes the N-acylation of UDP-3-O-acylglucosamine using 3-hydroxyacyl-ACP as the acyl donor. Is involved in the biosynthesis of lipid A, a phosphorylated glycolipid that anchors the lipopolysaccharide to the outer membrane of the cell K02536 - 2.3.1.191 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002669 456.0
DYD1_k127_2841223_8 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain K00015 - 1.1.1.26 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001076 430.0
DYD1_k127_2841223_9 Predicted permease YjgP/YjgQ family K11720 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002094 433.0
DYD1_k127_2846957_0 efflux transmembrane transporter activity K03287 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003864 457.0
DYD1_k127_2846957_1 Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000005874 276.0
DYD1_k127_2846957_2 Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family K01993,K16922 - - 0.0000000000000000000000000000000001427 139.0
DYD1_k127_2846957_3 Protein of unknown function (DUF3467) - - - 0.00000000000000000000007097 102.0
DYD1_k127_2882618_0 YceI-like domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000002982 267.0
DYD1_k127_2882618_1 n6 adenine-specific dna methyltransferase K06223 - 2.1.1.72 0.000000000000000000000000000000000000000000000000000000000000000006811 237.0
DYD1_k127_2882618_10 multi-organism process - - - 0.00001418 55.0
DYD1_k127_2882618_11 Tetratricopeptide repeat - GO:0000922,GO:0003674,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005813,GO:0005815,GO:0005819,GO:0005856,GO:0007346,GO:0008150,GO:0015630,GO:0019899,GO:0019900,GO:0030496,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0044422,GO:0044424,GO:0044430,GO:0044446,GO:0044464,GO:0050789,GO:0050794,GO:0051233,GO:0051726,GO:0065007,GO:0072686,GO:0097431,GO:1990023 - 0.000146 55.0
DYD1_k127_2882618_2 Belongs to the 'phage' integrase family - - - 0.00000000000000000000000000000000000002429 162.0
DYD1_k127_2882618_3 COG0433 Predicted ATPase - - - 0.0000000000000000000000000000000008084 148.0
DYD1_k127_2882618_4 Belongs to the 'phage' integrase family K04763 - - 0.0000000000000000000000000000005803 132.0
DYD1_k127_2882618_5 Histone-like DNA-binding protein which is capable of wrapping DNA to stabilize it, and thus to prevent its denaturation under extreme environmental conditions K03530 GO:0003674,GO:0003676,GO:0003677,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0008150,GO:0009889,GO:0010556,GO:0019219,GO:0019222,GO:0031323,GO:0031326,GO:0044424,GO:0044444,GO:0044464,GO:0050789,GO:0050794,GO:0051171,GO:0051252,GO:0060255,GO:0065007,GO:0080090,GO:0097159,GO:1901363,GO:1903506,GO:2001141 - 0.0000000000000000000001128 101.0
DYD1_k127_2882618_6 Replication-relaxation - - - 0.00000000001313 76.0
DYD1_k127_2882618_8 ThiF family K03148 - 2.7.7.73 0.00000000002552 71.0
DYD1_k127_2882618_9 COG0476 Dinucleotide-utilizing enzymes involved in molybdopterin and thiamine biosynthesis family 2 K21029 - 2.7.7.80 0.000000182 59.0
DYD1_k127_2921608_0 Modifies, by uridylylation and deuridylylation, the PII regulatory proteins (GlnB and homologs), in response to the nitrogen status of the cell that GlnD senses through the glutamine level. Under low glutamine levels, catalyzes the conversion of the PII proteins and UTP to PII-UMP and PPi, while under higher glutamine levels, GlnD hydrolyzes PII-UMP to PII and UMP (deuridylylation). Thus, controls uridylylation state and activity of the PII proteins, and plays an important role in the regulation of nitrogen K00982,K00990 - 2.7.7.42,2.7.7.59,2.7.7.89 0.0 1157.0
DYD1_k127_2921608_1 Glutamine synthetase, catalytic domain K01915 - 6.3.1.2 1.161e-286 882.0
DYD1_k127_2921608_10 Catalyzes the conversion of 3-deoxy-D-arabino- heptulosonate 7-phosphate (DAHP) to dehydroquinate (DHQ) K01735 - 4.2.3.4 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001413 432.0
DYD1_k127_2921608_11 Binds the lower part of the 30S subunit head. Binds mRNA in the 70S ribosome, positioning it for translation K02982 GO:0002181,GO:0003674,GO:0003735,GO:0005198,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0006412,GO:0006518,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0015935,GO:0019538,GO:0022626,GO:0022627,GO:0032991,GO:0034641,GO:0034645,GO:0043043,GO:0043170,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:0071704,GO:1901564,GO:1901566,GO:1901576,GO:1990904 - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002291 411.0
DYD1_k127_2921608_12 Metallopeptidase family M24 K01265 - 3.4.11.18 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002065 408.0
DYD1_k127_2921608_13 ABC transporter K06861 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001133 386.0
DYD1_k127_2921608_14 One of the primary rRNA binding proteins, it binds directly near the 3'-end of the 23S rRNA, where it nucleates assembly of the 50S subunit K02906 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000359 347.0
DYD1_k127_2921608_15 One of the primary rRNA binding proteins, it binds directly to 16S rRNA where it nucleates assembly of the body of the 30S subunit K02986 GO:0003674,GO:0003676,GO:0003723,GO:0003735,GO:0005198,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005840,GO:0006417,GO:0006450,GO:0008150,GO:0009889,GO:0009891,GO:0009893,GO:0010468,GO:0010556,GO:0010557,GO:0010604,GO:0010608,GO:0010628,GO:0015935,GO:0019222,GO:0019843,GO:0031323,GO:0031325,GO:0031326,GO:0031328,GO:0032268,GO:0032270,GO:0032991,GO:0034248,GO:0034250,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044446,GO:0044464,GO:0045727,GO:0045903,GO:0048518,GO:0048522,GO:0050789,GO:0050794,GO:0051171,GO:0051173,GO:0051246,GO:0051247,GO:0060255,GO:0065007,GO:0065008,GO:0080090,GO:0097159,GO:1901363,GO:1990904,GO:2000112 - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004667 341.0
DYD1_k127_2921608_16 This is 1 of the proteins that binds and probably mediates the attachment of the 5S RNA into the large ribosomal subunit, where it forms part of the central protuberance. In the 70S ribosome it contacts protein S13 of the 30S subunit (bridge B1b), connecting the 2 subunits K02931 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001677 325.0
DYD1_k127_2921608_17 Ribosomal protein L4/L1 family K02926 GO:0003674,GO:0003676,GO:0003723,GO:0003735,GO:0005198,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0006412,GO:0006518,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0019538,GO:0022626,GO:0032991,GO:0034641,GO:0034645,GO:0043043,GO:0043170,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044424,GO:0044444,GO:0044445,GO:0044464,GO:0071704,GO:0097159,GO:1901363,GO:1901564,GO:1901566,GO:1901576,GO:1990904 - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000001893 298.0
DYD1_k127_2921608_18 Located at the back of the 30S subunit body where it stabilizes the conformation of the head with respect to the body K02988 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000001263 286.0
DYD1_k127_2921608_19 This protein binds to the 23S rRNA, and is important in its secondary structure. It is located near the subunit interface in the base of the L7 L12 stalk, and near the tRNA binding site of the peptidyltransferase center K02933 GO:0002181,GO:0003674,GO:0003676,GO:0003723,GO:0003735,GO:0005198,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0006412,GO:0006518,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0015934,GO:0019538,GO:0022625,GO:0022626,GO:0032991,GO:0034641,GO:0034645,GO:0043043,GO:0043170,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:0071704,GO:0097159,GO:1901363,GO:1901564,GO:1901566,GO:1901576,GO:1990904 - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000003255 284.0
DYD1_k127_2921608_2 Catalyzes the ATP-dependent amidation of deamido-NAD to form NAD. Uses L-glutamine as a nitrogen source K01950 - 6.3.5.1 1.064e-272 850.0
DYD1_k127_2921608_20 Catalyzes the reversible transfer of the terminal phosphate group between ATP and AMP. Plays an important role in cellular energy homeostasis and in adenine nucleotide metabolism K00939 - 2.7.4.3 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000004149 286.0
DYD1_k127_2921608_22 Pilus assembly protein, PilO K02664 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000003822 264.0
DYD1_k127_2921608_23 Binds 23S rRNA and is also seen to make contacts with the A and possibly P site tRNAs K02878 GO:0003674,GO:0003676,GO:0003723,GO:0003735,GO:0005198,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0015934,GO:0019843,GO:0022625,GO:0022626,GO:0032991,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:0097159,GO:1901363,GO:1990904 - 0.0000000000000000000000000000000000000000000000000000000000000000000000001186 249.0
DYD1_k127_2921608_24 Fimbrial assembly protein (PilN) K02663 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000004431 250.0
DYD1_k127_2921608_25 Located on the platform of the 30S subunit, it bridges several disparate RNA helices of the 16S rRNA. Forms part of the Shine-Dalgarno cleft in the 70S ribosome K02948 - - 0.000000000000000000000000000000000000000000000000000000000000000000001638 236.0
DYD1_k127_2921608_26 Binds to 23S rRNA. Forms part of two intersubunit bridges in the 70S ribosome K02874 GO:0003674,GO:0003676,GO:0003723,GO:0003735,GO:0005198,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0015934,GO:0019843,GO:0022625,GO:0022626,GO:0032991,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:0070180,GO:0097159,GO:1901363,GO:1990904 - 0.000000000000000000000000000000000000000000000000000000000000000002832 227.0
DYD1_k127_2921608_27 Protein conserved in bacteria K11719 - - 0.00000000000000000000000000000000000000000000000000000000000000001711 231.0
DYD1_k127_2921608_28 binds to the 23S rRNA K02876 GO:0003674,GO:0003735,GO:0005198,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0015934,GO:0022625,GO:0022626,GO:0032991,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:1990904 - 0.0000000000000000000000000000000000000000000000000000000000002307 214.0
DYD1_k127_2921608_29 Located at the top of the head of the 30S subunit, it contacts several helices of the 16S rRNA. In the 70S ribosome it contacts the 23S rRNA (bridge B1a) and protein L5 of the 50S subunit (bridge B1b), connecting the 2 subunits K02952 GO:0003674,GO:0003735,GO:0005198,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0006412,GO:0006518,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0015935,GO:0019538,GO:0022613,GO:0032991,GO:0034641,GO:0034645,GO:0042254,GO:0043043,GO:0043170,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043603,GO:0043604,GO:0044085,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044446,GO:0044464,GO:0071704,GO:0071840,GO:1901564,GO:1901566,GO:1901576,GO:1990904 - 0.00000000000000000000000000000000000000000000000000000000002165 208.0
DYD1_k127_2921608_3 The central subunit of the protein translocation channel SecYEG. Consists of two halves formed by TMs 1-5 and 6-10. These two domains form a lateral gate at the front which open onto the bilayer between TMs 2 and 7, and are clamped together by SecE at the back. The channel is closed by both a pore ring composed of hydrophobic SecY resides and a short helix (helix 2A) on the extracellular side of the membrane which forms a plug. The plug probably moves laterally to allow the channel to open. The ring and the pore may move independently K03076 - - 1.069e-255 793.0
DYD1_k127_2921608_30 Nitrogen regulatory protein P-II K04751,K04752 - - 0.00000000000000000000000000000000000000000000000000000000062 203.0
DYD1_k127_2921608_31 Ribosomal protein L17 K02879 GO:0003674,GO:0003735,GO:0005198,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0015934,GO:0022625,GO:0022626,GO:0032991,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:1990904 - 0.000000000000000000000000000000000000000000000000000000002375 202.0
DYD1_k127_2921608_32 Involved in the binding of tRNA to the ribosomes K02946 - - 0.000000000000000000000000000000000000000000000000000000582 193.0
DYD1_k127_2921608_33 Pilus assembly protein, PilP K02665 - - 0.000000000000000000000000000000000000000000000000000008293 196.0
DYD1_k127_2921608_34 Protein S19 forms a complex with S13 that binds strongly to the 16S ribosomal RNA K02965 GO:0000028,GO:0003674,GO:0003735,GO:0005198,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0006996,GO:0008150,GO:0009987,GO:0015935,GO:0016043,GO:0022607,GO:0022613,GO:0022618,GO:0022626,GO:0022627,GO:0032991,GO:0034622,GO:0042254,GO:0042255,GO:0042274,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043933,GO:0044085,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:0065003,GO:0070925,GO:0071826,GO:0071840,GO:1990904 - 0.00000000000000000000000000000000000000000000000000005787 190.0
DYD1_k127_2921608_35 The globular domain of the protein is located near the polypeptide exit tunnel on the outside of the subunit, while an extended beta-hairpin is found that lines the wall of the exit tunnel in the center of the 70S ribosome K02890 - - 0.00000000000000000000000000000000000000000000000001667 181.0
DYD1_k127_2921608_36 One of the primary rRNA binding proteins, it binds directly to 16S rRNA central domain where it helps coordinate assembly of the platform of the 30S subunit K02994 GO:0003674,GO:0003735,GO:0005198,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0015935,GO:0022626,GO:0022627,GO:0032991,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:1990904 - 0.000000000000000000000000000000000000000000000003933 179.0
DYD1_k127_2921608_37 This is one of the proteins that binds and probably mediates the attachment of the 5S RNA into the large ribosomal subunit, where it forms part of the central protuberance K02881 - - 0.0000000000000000000000000000000000000000000001007 170.0
DYD1_k127_2921608_38 One of the proteins that surrounds the polypeptide exit tunnel on the outside of the subunit K02895 - - 0.000000000000000000000000000000000000000000001505 167.0
DYD1_k127_2921608_39 OstA-like protein K09774 - - 0.0000000000000000000000000000000000000000004437 164.0
DYD1_k127_2921608_4 Sigma-54 factor, Activator interacting domain (AID) K03092 - - 4.479e-236 738.0
DYD1_k127_2921608_40 One of the early assembly proteins it binds 23S rRNA. One of the proteins that surrounds the polypeptide exit tunnel on the outside of the ribosome. Forms the main docking site for trigger factor binding to the ribosome K02892 GO:0000027,GO:0003674,GO:0003676,GO:0003723,GO:0003735,GO:0005198,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0006412,GO:0006518,GO:0006807,GO:0006996,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0015934,GO:0016043,GO:0019538,GO:0022607,GO:0022613,GO:0022618,GO:0022625,GO:0022626,GO:0032991,GO:0034622,GO:0034641,GO:0034645,GO:0042254,GO:0042255,GO:0042273,GO:0043043,GO:0043170,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043603,GO:0043604,GO:0043933,GO:0044085,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:0065003,GO:0070925,GO:0071704,GO:0071826,GO:0071840,GO:0097159,GO:1901363,GO:1901564,GO:1901566,GO:1901576,GO:1990904 - 0.00000000000000000000000000000000000000001472 154.0
DYD1_k127_2921608_41 One of the primary rRNA binding proteins, it binds specifically to the 5'-end of 16S ribosomal RNA K02961 GO:0003674,GO:0003735,GO:0005198,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0006412,GO:0006518,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0015935,GO:0019538,GO:0022626,GO:0022627,GO:0032991,GO:0034641,GO:0034645,GO:0043043,GO:0043170,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:0071704,GO:1901564,GO:1901566,GO:1901576,GO:1990904 - 0.00000000000000000000000000000000002832 136.0
DYD1_k127_2921608_42 Required for dimerization of active 70S ribosomes into 100S ribosomes in stationary phase K05808 - - 0.0000000000000000000000000000000001255 136.0
DYD1_k127_2921608_43 One of the essential components for the initiation of protein synthesis. Stabilizes the binding of IF-2 and IF-3 on the 30S subunit to which N-formylmethionyl-tRNA(fMet) subsequently binds. Helps modulate mRNA selection, yielding the 30S pre- initiation complex (PIC). Upon addition of the 50S ribosomal subunit IF-1, IF-2 and IF-3 are released leaving the mature 70S translation initation complex K02518 - - 0.0000000000000000000000000000000007061 131.0
DYD1_k127_2921608_44 30S ribosomal protein S14 K02954 GO:0003674,GO:0003735,GO:0005198,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005840,GO:0006412,GO:0006518,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0015935,GO:0019538,GO:0032991,GO:0034641,GO:0034645,GO:0043043,GO:0043170,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044446,GO:0044464,GO:0071704,GO:1901564,GO:1901566,GO:1901576,GO:1990904 - 0.000000000000000000000000001855 111.0
DYD1_k127_2921608_45 bacterial-type RNA polymerase transcription factor activity, metal ion regulated sequence-specific DNA binding K11686,K13640,K18997 - - 0.000000000000000000009778 94.0
DYD1_k127_2921608_46 maturation of LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA) K02907 GO:0000027,GO:0003674,GO:0003735,GO:0005198,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0006412,GO:0006518,GO:0006807,GO:0006996,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0015934,GO:0016043,GO:0019538,GO:0022607,GO:0022613,GO:0022618,GO:0022625,GO:0022626,GO:0032991,GO:0034622,GO:0034641,GO:0034645,GO:0040007,GO:0042254,GO:0042255,GO:0042273,GO:0043043,GO:0043170,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043603,GO:0043604,GO:0043933,GO:0044085,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:0065003,GO:0070925,GO:0071704,GO:0071826,GO:0071840,GO:1901564,GO:1901566,GO:1901576,GO:1990904 - 0.00000000000001733 76.0
DYD1_k127_2921608_47 Belongs to the universal ribosomal protein uL29 family K02904 GO:0000027,GO:0003674,GO:0003735,GO:0005198,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0006412,GO:0006518,GO:0006807,GO:0006996,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0015934,GO:0016043,GO:0019538,GO:0022607,GO:0022613,GO:0022618,GO:0022625,GO:0022626,GO:0032991,GO:0034622,GO:0034641,GO:0034645,GO:0040007,GO:0042254,GO:0042255,GO:0042273,GO:0043043,GO:0043170,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043603,GO:0043604,GO:0043933,GO:0044085,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:0065003,GO:0070925,GO:0071704,GO:0071826,GO:0071840,GO:1901564,GO:1901566,GO:1901576,GO:1990904 - 0.0000000000000261 74.0
DYD1_k127_2921608_48 Belongs to the bacterial ribosomal protein bL36 family K02919 - - 0.0000000000005788 69.0
DYD1_k127_2921608_49 Modifies, by uridylylation and deuridylylation, the PII regulatory proteins (GlnB and homologs), in response to the nitrogen status of the cell that GlnD senses through the glutamine level. Under low glutamine levels, catalyzes the conversion of the PII proteins and UTP to PII-UMP and PPi, while under higher glutamine levels, GlnD hydrolyzes PII-UMP to PII and UMP (deuridylylation). Thus, controls uridylylation state and activity of the PII proteins, and plays an important role in the regulation of nitrogen K00003,K00982,K00990,K06950,K15371 GO:0000820,GO:0003674,GO:0003824,GO:0005575,GO:0005618,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005886,GO:0006521,GO:0008150,GO:0008882,GO:0010565,GO:0016020,GO:0016740,GO:0016772,GO:0016779,GO:0019222,GO:0030312,GO:0031323,GO:0033238,GO:0040007,GO:0042221,GO:0044424,GO:0044444,GO:0044464,GO:0050789,GO:0050794,GO:0050896,GO:0051171,GO:0060359,GO:0062012,GO:0065007,GO:0070566,GO:0071944,GO:0080090,GO:1901698 1.1.1.3,1.4.1.2,2.7.7.42,2.7.7.59,2.7.7.89 0.00000001737 55.0
DYD1_k127_2921608_5 Secretin and TonB N terminus short domain K02666 - - 8.905e-212 677.0
DYD1_k127_2921608_50 Ammonium Transporter Family K03320 - - 0.000003861 51.0
DYD1_k127_2921608_6 DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates K03040 - 2.7.7.6 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008908 559.0
DYD1_k127_2921608_7 Type IV pilus assembly protein PilM; K02662 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000221 498.0
DYD1_k127_2921608_8 One of the primary rRNA binding proteins. Required for association of the 30S and 50S subunits to form the 70S ribosome, for tRNA binding and peptide bond formation. It has been suggested to have peptidyltransferase activity K02886 GO:0002181,GO:0003674,GO:0003676,GO:0003723,GO:0003735,GO:0005198,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0006412,GO:0006518,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0015934,GO:0019538,GO:0022625,GO:0022626,GO:0032991,GO:0034641,GO:0034645,GO:0043043,GO:0043170,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:0071704,GO:0097159,GO:1901363,GO:1901564,GO:1901566,GO:1901576,GO:1990904 - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001922 467.0
DYD1_k127_2921608_9 Displays ATPase and GTPase activities K06958 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001803 442.0
DYD1_k127_294262_0 Molydopterin dinucleotide binding domain K00302,K10814 - 1.4.99.5,1.5.3.1 0.0 1434.0
DYD1_k127_294262_1 NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient K00333,K13378 - 1.6.5.3 1.774e-267 824.0
DYD1_k127_294262_10 histidine kinase A domain protein - - - 0.0000000000000000000000000000000000000000000000000000000005085 226.0
DYD1_k127_294262_12 Catalyzes the complex heterocyclic radical-mediated conversion of 6-carboxy-5,6,7,8-tetrahydropterin (CPH4) to 7- carboxy-7-deazaguanine (CDG), a step common to the biosynthetic pathways of all 7-deazapurine-containing compounds K10026 - 4.3.99.3 0.00000000000000000000001515 100.0
DYD1_k127_294262_2 Involved in the restart of stalled replication forks. Recognizes and binds the arrested nascent DNA chain at stalled replication forks. It can open the DNA duplex, via its helicase activity, and promote assembly of the primosome and loading of the major replicative helicase DnaB onto DNA K04066 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002428 437.0
DYD1_k127_294262_3 Flagellar Motor Protein K02557 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000302 406.0
DYD1_k127_294262_4 NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient K00338 - 1.6.5.3 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001983 368.0
DYD1_k127_294262_5 NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient K00331 - 1.6.5.3 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007315 344.0
DYD1_k127_294262_6 NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient K00332 - 1.6.5.3 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000005021 280.0
DYD1_k127_294262_7 Phosphoserine phosphatase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000002441 282.0
DYD1_k127_294262_8 Belongs to the complex I subunit 6 family K00339 - 1.6.5.3 0.0000000000000000000000000000000000000000000000000000000000000000007645 230.0
DYD1_k127_294262_9 NADH dehydrogenase (ubiquinone) activity K00330 - 1.6.5.3 0.000000000000000000000000000000000000000000000000000000000000363 214.0
DYD1_k127_2950127_0 Evidence 2a Function of homologous gene experimentally demonstrated in an other organism K00322,K00382 - 1.6.1.1,1.8.1.4 1.438e-220 692.0
DYD1_k127_2950127_1 Catalyzes an amino-pyrimidine hydrolysis reaction at the C5' of the pyrimidine moiety of thiamine compounds, a reaction that is part of a thiamine salvage pathway K03707 GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0044424,GO:0044444,GO:0044464 3.5.99.2 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001438 355.0
DYD1_k127_2950127_2 thioredoxin peroxidase activity K11065 - 1.11.1.15 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005498 320.0
DYD1_k127_2950127_3 hydrolase activity, acting on ester bonds K01563 - 3.8.1.5 0.00000000000000000000000000000003502 127.0
DYD1_k127_2950127_4 Ribonuclease toxin, BrnT, of type II toxin-antitoxin system K09803 - - 0.000000000000000000000000001919 115.0
DYD1_k127_2950127_5 Protein of unknown function (DUF2283) - - - 0.00000000000000000001932 92.0
DYD1_k127_2950127_7 STAS domain K04749 - - 0.000000000000003308 79.0
DYD1_k127_2950127_8 - - - - 0.00008879 48.0
DYD1_k127_2950706_0 Transglycosylase K05365,K05366 - 2.4.1.129,3.4.16.4 1.308e-287 902.0
DYD1_k127_2950706_1 Formate--tetrahydrofolate ligase K01938 GO:0003674,GO:0003824,GO:0004329,GO:0004477,GO:0004488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006082,GO:0006139,GO:0006144,GO:0006575,GO:0006725,GO:0006732,GO:0006760,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009108,GO:0009112,GO:0009113,GO:0009256,GO:0009257,GO:0009396,GO:0009987,GO:0016053,GO:0016491,GO:0016645,GO:0016646,GO:0016787,GO:0016810,GO:0016814,GO:0016874,GO:0016879,GO:0018130,GO:0019238,GO:0019438,GO:0019752,GO:0034641,GO:0042398,GO:0042440,GO:0042558,GO:0042559,GO:0043436,GO:0043603,GO:0043604,GO:0043648,GO:0043650,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0044283,GO:0044424,GO:0044464,GO:0046112,GO:0046148,GO:0046394,GO:0046483,GO:0046653,GO:0046654,GO:0051186,GO:0051188,GO:0055086,GO:0055114,GO:0071704,GO:0072521,GO:0072522,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576 6.3.4.3 9.022e-267 833.0
DYD1_k127_2950706_10 O-methyltransferase activity - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001109 610.0
DYD1_k127_2950706_11 FAD binding domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001204 576.0
DYD1_k127_2950706_12 methyltransferase K07755 - 2.1.1.137 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006881 571.0
DYD1_k127_2950706_13 Phosphate transporter family K03306 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002287 559.0
DYD1_k127_2950706_14 cytochrome C peroxidase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006736 529.0
DYD1_k127_2950706_15 stress-induced mitochondrial fusion K04088 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004752 520.0
DYD1_k127_2950706_16 Arsenical pump membrane protein - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001712 505.0
DYD1_k127_2950706_17 stress-induced mitochondrial fusion K04087 GO:0003674,GO:0003824,GO:0005575,GO:0005623,GO:0005886,GO:0005887,GO:0006508,GO:0006807,GO:0006950,GO:0008150,GO:0008152,GO:0008233,GO:0009266,GO:0009408,GO:0009628,GO:0009897,GO:0009986,GO:0016020,GO:0016021,GO:0016787,GO:0019538,GO:0031224,GO:0031226,GO:0031233,GO:0032991,GO:0043086,GO:0043170,GO:0044092,GO:0044238,GO:0044425,GO:0044459,GO:0044464,GO:0050790,GO:0050896,GO:0065007,GO:0065009,GO:0071575,GO:0071704,GO:0071944,GO:0098552,GO:0098796,GO:0140096,GO:1901564 - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005795 478.0
DYD1_k127_2950706_18 epimerase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006981 462.0
DYD1_k127_2950706_19 Peptidase family M23 - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003142 436.0
DYD1_k127_2950706_2 Evidence 3 Function proposed based on presence of conserved amino acid motif, structural feature or limited homology K07263 - - 8.986e-248 777.0
DYD1_k127_2950706_20 Peptidase family M50 - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008708 419.0
DYD1_k127_2950706_21 methyltransferase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004521 389.0
DYD1_k127_2950706_22 HAD-hyrolase-like K01091 - 3.1.3.18 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005617 359.0
DYD1_k127_2950706_23 Metallo-beta-lactamase superfamily - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004841 342.0
DYD1_k127_2950706_24 - - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008325 304.0
DYD1_k127_2950706_25 Putative cyclase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000003302 303.0
DYD1_k127_2950706_26 Transposase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000009137 291.0
DYD1_k127_2950706_27 Poorly processive, error-prone DNA polymerase involved in untargeted mutagenesis. Copies undamaged DNA at stalled replication forks, which arise in vivo from mismatched or misaligned primer ends. These misaligned primers can be extended by PolIV. Exhibits no 3'-5' exonuclease (proofreading) activity. May be involved in translesional synthesis K04479 - 2.7.7.7 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000005177 285.0
DYD1_k127_2950706_29 protein disulfide oxidoreductase activity K07390 GO:0003674,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0044424,GO:0044444,GO:0044464,GO:0048037,GO:0051536,GO:0051537,GO:0051540 - 0.000000000000000000000000000000000000000000000000000000001919 200.0
DYD1_k127_2950706_3 succinyl-diaminopimelate desuccinylase activity - - - 1.983e-239 747.0
DYD1_k127_2950706_30 Polymer-forming cytoskeletal - - - 0.000000000000000000000000000000000000000000000000000001571 195.0
DYD1_k127_2950706_32 PFAM regulatory protein TetR K16137 - - 0.0000000000000000000000000000000000000000000000005131 181.0
DYD1_k127_2950706_34 Protein of unknown function, DUF488 - - - 0.00000000000000000000000000000000000000000007691 164.0
DYD1_k127_2950706_36 Antioxidant protein with alkyl hydroperoxidase activity. Required for the reduction of the AhpC active site cysteine residues and for the regeneration of the AhpC enzyme activity - - - 0.000000000000000000000000000000000000000004617 160.0
DYD1_k127_2950706_37 Activator of Hsp90 ATPase homolog 1-like protein - - - 0.000000000000000000000000000000000000000008273 158.0
DYD1_k127_2950706_38 (Barnase) inhibitor - - - 0.00000000000000000000000000000000000004709 150.0
DYD1_k127_2950706_39 Protein of Unknown function (DUF2784) - - - 0.00000000000000000000000000000000000006684 145.0
DYD1_k127_2950706_4 symporter activity K03307,K14387 - - 1.725e-214 677.0
DYD1_k127_2950706_41 SnoaL-like domain - - - 0.00000000000000000000000000000000006252 138.0
DYD1_k127_2950706_42 positive regulation of type IV pilus biogenesis K07343 - - 0.00000000000000000000000000000006622 128.0
DYD1_k127_2950706_43 FAD linked oxidase domain protein - - - 0.000000000000000000000000000006663 126.0
DYD1_k127_2950706_44 TfoX N-terminal domain - - - 0.00000000000000000000000000001762 121.0
DYD1_k127_2950706_45 Belongs to the BolA IbaG family K05527,K22066 GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006139,GO:0006351,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0008360,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0016070,GO:0018130,GO:0019438,GO:0019538,GO:0022603,GO:0022604,GO:0032774,GO:0034641,GO:0034645,GO:0034654,GO:0043170,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044271,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0050789,GO:0050793,GO:0050794,GO:0051128,GO:0051604,GO:0065007,GO:0065008,GO:0071704,GO:0090304,GO:0097428,GO:0097659,GO:0106035,GO:1901360,GO:1901362,GO:1901564,GO:1901576 - 0.000000000000000000000000256 107.0
DYD1_k127_2950706_46 nuclease - - - 0.0000000000000000000000009959 113.0
DYD1_k127_2950706_47 PFAM CutA1 divalent ion tolerance protein K03926 - - 0.000000000000000000000008283 104.0
DYD1_k127_2950706_49 Histidine kinase K03406 - - 0.00000000000000000002531 93.0
DYD1_k127_2950706_5 Aminotransferase class-III K01845 - 5.4.3.8 5.972e-213 668.0
DYD1_k127_2950706_50 ThiS family K03636 - - 0.00000000000000000009354 94.0
DYD1_k127_2950706_53 Protein of unknown function, DUF488 - - - 0.0000000000000004998 82.0
DYD1_k127_2950706_55 Transcriptional regulator, ArsR family K03892 - - 0.0001124 47.0
DYD1_k127_2950706_6 Evidence 3 Function proposed based on presence of conserved amino acid motif, structural feature or limited homology K07263 - - 1.969e-210 665.0
DYD1_k127_2950706_7 FAD dependent oxidoreductase - - - 5.719e-204 647.0
DYD1_k127_2950706_8 protein related to plant photosystem II stability assembly factor - - - 3.134e-196 617.0
DYD1_k127_2950706_9 radical SAM domain protein - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005171 591.0
DYD1_k127_2983123_0 ABC-type Mn2 Zn2 transport systems permease components - - - 0.00000000000000000000000000000000000000000000000003401 180.0
DYD1_k127_2983123_1 PFAM nuclease (SNase domain protein) - - - 0.000000000000000000000000009943 111.0
DYD1_k127_2983123_2 phosphorelay signal transduction system - - - 0.0000000000000000000001261 102.0
DYD1_k127_2983123_3 - - - - 0.000000000000000007083 88.0
DYD1_k127_3005177_0 Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family K18299 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001625 571.0
DYD1_k127_3005177_1 Transcriptional regulator K12146,K15836 GO:0000976,GO:0000984,GO:0001017,GO:0001067,GO:0001150,GO:0001158,GO:0003674,GO:0003676,GO:0003677,GO:0003690,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006139,GO:0006351,GO:0006352,GO:0006355,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009889,GO:0009891,GO:0009893,GO:0009987,GO:0010467,GO:0010468,GO:0010556,GO:0010557,GO:0010604,GO:0010628,GO:0016043,GO:0016070,GO:0018130,GO:0019219,GO:0019222,GO:0019438,GO:0022607,GO:0031323,GO:0031325,GO:0031326,GO:0031328,GO:0031334,GO:0032774,GO:0034641,GO:0034645,GO:0034654,GO:0035326,GO:0042802,GO:0043170,GO:0043254,GO:0043565,GO:0043933,GO:0044085,GO:0044087,GO:0044089,GO:0044212,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044271,GO:0044424,GO:0044444,GO:0044464,GO:0045893,GO:0045935,GO:0046483,GO:0048518,GO:0048522,GO:0050789,GO:0050794,GO:0051128,GO:0051130,GO:0051171,GO:0051173,GO:0051252,GO:0051254,GO:0051259,GO:0051260,GO:0051262,GO:0051289,GO:0060255,GO:0065003,GO:0065007,GO:0071704,GO:0071840,GO:0080090,GO:0090304,GO:0097159,GO:0097659,GO:1901360,GO:1901362,GO:1901363,GO:1901576,GO:1902680,GO:1903506,GO:1903508,GO:1990837,GO:2000112,GO:2000142,GO:2000144,GO:2001141 - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000877 449.0
DYD1_k127_3005177_2 Multi-sensor signal transduction multi-kinase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005741 419.0
DYD1_k127_3005177_3 Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006196 359.0
DYD1_k127_3005177_4 helix_turn_helix, Lux Regulon - - - 0.000000000000000000000000000000000000000000000000000000000000000001975 233.0
DYD1_k127_3005177_5 helix_turn_helix, Lux Regulon - - - 0.0000000000000000000002959 100.0
DYD1_k127_3039612_0 AcrB/AcrD/AcrF family K15726 - - 0.0 1082.0
DYD1_k127_3039612_1 Evidence 3 Function proposed based on presence of conserved amino acid motif, structural feature or limited homology K15727 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002967 379.0
DYD1_k127_3039612_2 Evidence 3 Function proposed based on presence of conserved amino acid motif, structural feature or limited homology K15725 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001528 376.0
DYD1_k127_3039612_3 Belongs to the class IV-like SAM-binding methyltransferase superfamily. RNA methyltransferase TrmH family K03218,K03437,K03501 - 2.1.1.170,2.1.1.185 0.00000000000000000000000000000000000000000000000000002214 199.0
DYD1_k127_3039612_5 Cytochrome c K12263 - - 0.000000000000000000000000000000000008897 140.0
DYD1_k127_3039612_6 Plasmid maintenance system killer K07334 - - 0.00000000000000000000000000000006005 126.0
DYD1_k127_3039612_7 S-adenosylmethionine-dependent methyltransferase K06969 - 2.1.1.191 0.00000000000000000000000000001502 119.0
DYD1_k127_3039612_8 Helix-turn-helix XRE-family like proteins K21498 - - 0.0000000000000000000001036 102.0
DYD1_k127_3042031_1 - - - - 0.0000000000000000000000000000000000000000000001588 170.0
DYD1_k127_3042031_2 - - - - 0.000001413 59.0
DYD1_k127_3061055_0 Catalyzes the condensation of isopentenyl diphosphate (IPP) with allylic pyrophosphates generating different type of terpenoids K00806,K12503 GO:0002094,GO:0003674,GO:0003824,GO:0004659,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006066,GO:0006629,GO:0006720,GO:0008150,GO:0008152,GO:0008299,GO:0008610,GO:0009058,GO:0009987,GO:0016093,GO:0016094,GO:0016740,GO:0016765,GO:0044237,GO:0044238,GO:0044249,GO:0044255,GO:0044281,GO:0044283,GO:0044424,GO:0044444,GO:0044464,GO:0046165,GO:0071704,GO:1901576,GO:1901615,GO:1901617 2.5.1.31,2.5.1.68 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003302 336.0
DYD1_k127_3061055_1 Belongs to the dCTP deaminase family K01494 GO:0003674,GO:0003824,GO:0006139,GO:0006220,GO:0006244,GO:0006253,GO:0006725,GO:0006753,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0008829,GO:0009056,GO:0009058,GO:0009117,GO:0009141,GO:0009143,GO:0009147,GO:0009149,GO:0009166,GO:0009200,GO:0009204,GO:0009211,GO:0009213,GO:0009219,GO:0009223,GO:0009262,GO:0009264,GO:0009394,GO:0009987,GO:0016787,GO:0016810,GO:0016814,GO:0018130,GO:0019239,GO:0019438,GO:0019439,GO:0019637,GO:0019692,GO:0034404,GO:0034641,GO:0034654,GO:0034655,GO:0044237,GO:0044238,GO:0044248,GO:0044249,GO:0044270,GO:0044271,GO:0044281,GO:0044283,GO:0046065,GO:0046386,GO:0046434,GO:0046483,GO:0046700,GO:0055086,GO:0071704,GO:0072527,GO:0072529,GO:1901135,GO:1901136,GO:1901292,GO:1901360,GO:1901361,GO:1901362,GO:1901564,GO:1901565,GO:1901575,GO:1901576 3.5.4.13 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002608 329.0
DYD1_k127_3061055_2 NUDIX domain K01823 - 5.3.3.2 0.000000000000000000000000000000000000000000000000000000000000000000003788 239.0
DYD1_k127_3061055_3 His Kinase A (phosphoacceptor) domain - - - 0.00000000000000000005153 100.0
DYD1_k127_3061055_4 Histidine kinase - - - 0.000000000000008424 83.0
DYD1_k127_3061055_5 phosphorelay signal transduction system K07714 - - 0.00000000000003497 80.0
DYD1_k127_3084774_0 PFAM blue (type 1) copper domain protein - - - 0.0000000000000000000000000000000000000000000000000000000000000000000009337 248.0
DYD1_k127_3084774_1 Pfam Adenylate and Guanylate cyclase catalytic domain K01768 - 4.6.1.1 0.00000000000000000000000000000000000000000000000000000006049 216.0
DYD1_k127_3084774_2 Protein of unknown function (DUF2283) - - - 0.0000000000000000000002603 98.0
DYD1_k127_3104329_0 PFAM nucleic acid binding, OB-fold, tRNA K01174 - 3.1.31.1 0.000000000000000000000000000000000000004074 149.0
DYD1_k127_3104329_1 Lytic transglycosylase with a strong preference for naked glycan strands that lack stem peptides K03642 GO:0005575,GO:0005623,GO:0009279,GO:0016020,GO:0019867,GO:0030312,GO:0030313,GO:0031975,GO:0044462,GO:0044464,GO:0071944 - 0.00000000000000000000000000000000002077 142.0
DYD1_k127_3104329_2 Belongs to the Glu Leu Phe Val dehydrogenases family K00261,K00262 - 1.4.1.3,1.4.1.4 0.0000000000000000000000003997 105.0
DYD1_k127_3104329_3 - - - - 0.0000000000000000847 84.0
DYD1_k127_3158521_0 WD40 domain protein beta Propeller K12132 - 2.7.11.1 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001071 493.0
DYD1_k127_3158521_1 Serine threonine protein kinase K12132 - 2.7.11.1 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004711 308.0
DYD1_k127_3158521_2 Transcriptional regulatory protein, C terminal - - - 0.0000000000000000000000000008737 132.0
DYD1_k127_3166703_0 ATP-grasp domain K01905,K22224 - 6.2.1.13 5.232e-274 860.0
DYD1_k127_3166703_1 Has a glutathione-disulfide oxidoreductase activity in the presence of NADPH and glutathione reductase. Reduces low molecular weight disulfides and proteins - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007007 442.0
DYD1_k127_3166703_10 PFAM Cytochrome C - - - 0.0000000002306 66.0
DYD1_k127_3166703_2 AMP binding - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000684 313.0
DYD1_k127_3166703_3 Phosphoribosyl transferase domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000005048 281.0
DYD1_k127_3166703_4 amine dehydrogenase activity - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000792 246.0
DYD1_k127_3166703_5 Belongs to the small heat shock protein (HSP20) family K13993 - - 0.0000000000000000000000000000000000000000000000000000000000000000002613 232.0
DYD1_k127_3166703_7 Evidence 3 Function proposed based on presence of conserved amino acid motif, structural feature or limited homology K12263 - - 0.0000000000000000000000000000000000000000002592 160.0
DYD1_k127_3166703_8 Domain in cystathionine beta-synthase and other proteins. - - - 0.00000000000000000000000000000000006934 141.0
DYD1_k127_3166703_9 Cytochrome c K02305,K17223 - - 0.0000000000000000000000000000000003844 133.0
DYD1_k127_3190443_0 Catalyzes the acyloin condensation reaction between C atoms 2 and 3 of pyruvate and glyceraldehyde 3-phosphate to yield 1-deoxy-D-xylulose-5-phosphate (DXP) K01662 - 2.2.1.7 0.0 1119.0
DYD1_k127_3190443_1 Squalene-hopene cyclase C-terminal domain K06045 - 4.2.1.129,5.4.99.17 0.0 1106.0
DYD1_k127_3190443_2 Converts 2C-methyl-D-erythritol 2,4-cyclodiphosphate (ME-2,4cPP) into 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate K03526 GO:0003674,GO:0003824,GO:0006081,GO:0006082,GO:0006090,GO:0006629,GO:0006644,GO:0006720,GO:0006793,GO:0006796,GO:0008150,GO:0008152,GO:0008299,GO:0008610,GO:0008654,GO:0009058,GO:0009240,GO:0009987,GO:0016491,GO:0016725,GO:0019288,GO:0019637,GO:0019682,GO:0019752,GO:0032787,GO:0043436,GO:0044237,GO:0044238,GO:0044249,GO:0044255,GO:0044281,GO:0046429,GO:0046490,GO:0052592,GO:0055114,GO:0071704,GO:0090407,GO:1901135,GO:1901576 1.17.7.1,1.17.7.3 2.617e-216 676.0
DYD1_k127_3190443_3 Surface antigen - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008123 541.0
DYD1_k127_3190443_4 Permease MlaE K02066 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003093 410.0
DYD1_k127_3190443_5 ABC transporter K02065 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000016 379.0
DYD1_k127_3190443_6 Evidence 3 Function proposed based on presence of conserved amino acid motif, structural feature or limited homology K07323 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000001141 283.0
DYD1_k127_3190443_7 MlaD protein K02067 - - 0.0000000000000000000000000000000000000000000000000000000000000000001906 233.0
DYD1_k127_3190443_8 adenosylhomocysteine nucleosidase activity K01243,K03527 - 1.17.7.4,3.2.2.9 0.000000000000000000000000000000000000000000000007243 182.0
DYD1_k127_3190443_9 ABC transporter substrate-binding protein PnrA-like K02058 - - 0.0000000000000000000000000000000000001187 145.0
DYD1_k127_3190700_0 Protein of unknown function (DUF1116) - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003112 589.0
DYD1_k127_3190700_1 CoA-ligase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008064 485.0
DYD1_k127_3190700_2 Amino acid kinase family K00926 - 2.7.2.2 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000014 382.0
DYD1_k127_3190700_3 PFAM Bacterial regulatory proteins, gntR family - - - 0.000000000000000000000000000000000000000000000000945 183.0
DYD1_k127_3190700_4 ABC transporter substrate-binding protein PnrA-like K02058 - - 0.00000000000000000000000000000000000004456 146.0
DYD1_k127_3190700_5 Protein of unknown function (DUF2877) - - - 0.0000000000000001112 91.0
DYD1_k127_3215391_0 Part of the Sec protein translocase complex. Interacts with the SecYEG preprotein conducting channel. Has a central role in coupling the hydrolysis of ATP to the transfer of proteins into and across the cell membrane, serving as an ATP-driven molecular motor driving the stepwise translocation of polypeptide chains across the membrane K03070 GO:0000166,GO:0003674,GO:0003824,GO:0005215,GO:0005488,GO:0005524,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005886,GO:0005887,GO:0006810,GO:0008104,GO:0008144,GO:0008150,GO:0008320,GO:0008565,GO:0015031,GO:0015399,GO:0015405,GO:0015440,GO:0015450,GO:0015462,GO:0015833,GO:0016020,GO:0016021,GO:0016462,GO:0016787,GO:0016817,GO:0016818,GO:0016887,GO:0017076,GO:0017111,GO:0022804,GO:0022857,GO:0022884,GO:0030554,GO:0031224,GO:0031226,GO:0031522,GO:0032553,GO:0032555,GO:0032559,GO:0032991,GO:0033036,GO:0033220,GO:0035639,GO:0036094,GO:0042623,GO:0042626,GO:0042886,GO:0042887,GO:0043167,GO:0043168,GO:0043492,GO:0043952,GO:0044424,GO:0044425,GO:0044444,GO:0044459,GO:0044464,GO:0045184,GO:0051179,GO:0051234,GO:0055085,GO:0071702,GO:0071705,GO:0071806,GO:0071944,GO:0097159,GO:0097367,GO:1901265,GO:1901363,GO:1904680 - 0.0 1543.0
DYD1_k127_3215391_1 E1-E2 ATPase K01533,K17686 - 3.6.3.4,3.6.3.54 0.0 1057.0
DYD1_k127_3215391_10 MerT mercuric transport protein K08363 - - 0.00000000003396 69.0
DYD1_k127_3215391_12 Heavy metal-associated domain protein K07213 - - 0.0000004291 56.0
DYD1_k127_3215391_2 Putative S-adenosyl-L-methionine-dependent methyltransferase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003017 513.0
DYD1_k127_3215391_3 peptidyl-tyrosine sulfation - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004258 375.0
DYD1_k127_3215391_4 - - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001196 366.0
DYD1_k127_3215391_5 Required for disulfide bond formation in some periplasmic proteins. Acts by transferring its disulfide bond to other proteins and is reduced in the process K03673 GO:0003674,GO:0003756,GO:0003824,GO:0005575,GO:0005623,GO:0006457,GO:0008150,GO:0008152,GO:0009987,GO:0015035,GO:0015036,GO:0016491,GO:0016667,GO:0016853,GO:0016860,GO:0016864,GO:0030288,GO:0030313,GO:0031975,GO:0042221,GO:0042597,GO:0044464,GO:0046677,GO:0050896,GO:0051716,GO:0055114,GO:0070887,GO:0071236,GO:0140096 - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000577 274.0
DYD1_k127_3215391_6 cell redox homeostasis - - - 0.000000000000000000000000000000000000000000000000000000000000000000000002542 249.0
DYD1_k127_3215391_7 Evidence 3 Function proposed based on presence of conserved amino acid motif, structural feature or limited homology K07285 - - 0.00000000000000000000000000000000000000000000000001536 192.0
DYD1_k127_3215391_8 MerR, DNA binding K08365 - - 0.000000000000000000000000001113 117.0
DYD1_k127_3215391_9 Carboxymuconolactone decarboxylase family - - - 0.0000000000000000000003176 102.0
DYD1_k127_3253392_0 Bacterial extracellular solute-binding proteins, family 5 Middle K02035 - - 1.225e-218 695.0
DYD1_k127_3253392_1 ATPases associated with a variety of cellular activities K09811,K09812 GO:0000166,GO:0000287,GO:0000910,GO:0003674,GO:0003824,GO:0005488,GO:0005524,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005886,GO:0007049,GO:0008144,GO:0008150,GO:0008356,GO:0009898,GO:0009966,GO:0009987,GO:0010646,GO:0016020,GO:0016043,GO:0016462,GO:0016787,GO:0016817,GO:0016818,GO:0016887,GO:0017076,GO:0017111,GO:0019897,GO:0019898,GO:0022402,GO:0022603,GO:0022607,GO:0023051,GO:0030145,GO:0030554,GO:0031234,GO:0032153,GO:0032506,GO:0032553,GO:0032555,GO:0032559,GO:0035639,GO:0036094,GO:0042173,GO:0042221,GO:0043167,GO:0043168,GO:0043169,GO:0043937,GO:0043938,GO:0044085,GO:0044424,GO:0044425,GO:0044459,GO:0044464,GO:0045595,GO:0045597,GO:0045881,GO:0046677,GO:0046872,GO:0046914,GO:0048518,GO:0048522,GO:0048583,GO:0050789,GO:0050793,GO:0050794,GO:0050896,GO:0051094,GO:0051301,GO:0065007,GO:0070297,GO:0071840,GO:0071944,GO:0090529,GO:0097159,GO:0097367,GO:0098552,GO:0098562,GO:1901265,GO:1901363,GO:1902531 - 0.0000000000000000000000000000000000000000000000000000000000000000000009673 241.0
DYD1_k127_3253392_2 transmembrane signaling receptor activity K03406 - - 0.00000000000001159 78.0
DYD1_k127_329404_0 Galactose oxidase, central domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000009993 257.0
DYD1_k127_329404_1 Ntpase (Nacht family) - - - 0.0000000000000000000000000000000000000000000000000000002732 210.0
DYD1_k127_329404_2 - - - - 0.0000000000000000000000000000000000000000000000001053 185.0
DYD1_k127_329404_3 HNH endonuclease - - - 0.0000000000000000007296 100.0
DYD1_k127_3294065_0 DNA-directed DNA polymerase K02337 - 2.7.7.7 0.0 1813.0
DYD1_k127_3294065_1 AICARFT/IMPCHase bienzyme K00602 - 2.1.2.3,3.5.4.10 9.034e-284 883.0
DYD1_k127_3294065_10 aldo-keto reductase (NADP) activity - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003281 448.0
DYD1_k127_3294065_11 Mycolic acid cyclopropane synthetase K00574 - 2.1.1.79 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002344 411.0
DYD1_k127_3294065_12 RadC-like JAB domain K03630 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001462 344.0
DYD1_k127_3294065_13 lactoylglutathione lyase activity K08234 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000006572 299.0
DYD1_k127_3294065_14 Reversibly transfers an adenylyl group from ATP to 4'- phosphopantetheine, yielding dephospho-CoA (dPCoA) and pyrophosphate K00954 - 2.7.7.3 0.000000000000000000000000000000000000000000000000000000000000000000000000000005454 265.0
DYD1_k127_3294065_15 lactoylglutathione lyase activity K01759 GO:0008150,GO:0010035,GO:0010038,GO:0042221,GO:0046686,GO:0050896 4.4.1.5 0.0000000000000000000000000000000000000000000000000000000000001939 215.0
DYD1_k127_3294065_16 Sigma-70, region 4 K03088 - - 0.0000000000000000000000000000000000000000000000000000000001595 212.0
DYD1_k127_3294065_17 Telomere recombination K07566 - 2.7.7.87 0.000000000000000000000000000000000000000000000000000000005204 207.0
DYD1_k127_3294065_18 - - - - 0.00000000000000000000000000000000000000000000000000001293 191.0
DYD1_k127_3294065_19 Conserved hypothetical protein 95 - - - 0.00000000000000000000000000000000000000000000000000004625 192.0
DYD1_k127_3294065_2 belongs to the aldehyde dehydrogenase family K00128 GO:0003674,GO:0003824,GO:0004029,GO:0006081,GO:0008150,GO:0008152,GO:0009987,GO:0016491,GO:0016620,GO:0016903,GO:0044237,GO:0055114,GO:0071704 1.2.1.3 6.665e-240 750.0
DYD1_k127_3294065_21 domain protein K10716 - - 0.00000000000000000000000000000000000000003198 160.0
DYD1_k127_3294065_22 - - - - 0.0000000000000000000000000004236 114.0
DYD1_k127_3294065_23 Putative regulatory protein - - - 0.00000000000000000000000005918 111.0
DYD1_k127_3294065_3 serine-type endopeptidase activity K04771 - 3.4.21.107 6.115e-218 687.0
DYD1_k127_3294065_4 Elongation factor G, domain IV K02355 - - 1.187e-202 652.0
DYD1_k127_3294065_5 Evidence 3 Function proposed based on presence of conserved amino acid motif, structural feature or limited homology K00812 - 2.6.1.1 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002014 610.0
DYD1_k127_3294065_6 Catalyzes the 6-electron oxidation of protoporphyrinogen-IX to form protoporphyrin-IX K00231 - 1.3.3.15,1.3.3.4 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006983 605.0
DYD1_k127_3294065_7 Phosphoribosylglycinamide synthetase, C domain K01945 - 6.3.4.13 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005204 601.0
DYD1_k127_3294065_8 saccharopine dehydrogenase activity K00290 - 1.5.1.7 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004107 572.0
DYD1_k127_3294065_9 Component of the acetyl coenzyme A carboxylase (ACC) complex. First, biotin carboxylase catalyzes the carboxylation of biotin on its carrier protein (BCCP) and then the CO(2) group is transferred by the carboxyltransferase to acetyl-CoA to form malonyl-CoA K01962 - 2.1.3.15,6.4.1.2 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007045 526.0
DYD1_k127_3298275_0 MacB-like periplasmic core domain K02004 - - 1.839e-268 852.0
DYD1_k127_3298275_1 MacB-like periplasmic core domain K02004 - - 1.232e-207 651.0
DYD1_k127_3298275_10 EthD domain - - - 0.0000000000000000000000000000000000000000000000000004275 186.0
DYD1_k127_3298275_11 crossover junction endodeoxyribonuclease activity K01160 - 3.1.22.4 0.00000000000000000000000000000000000000000000008941 175.0
DYD1_k127_3298275_13 Regulatory protein, FmdB family - - - 0.00000000000000000000000000000000354 131.0
DYD1_k127_3298275_14 response regulator - - - 0.000000000000000000000003741 105.0
DYD1_k127_3298275_16 TIGRFAM YgiT-type zinc finger domain - - - 0.00000000000000000000001876 101.0
DYD1_k127_3298275_17 Domain of unknown function (DUF4258) - - - 0.0000000000000000000003987 100.0
DYD1_k127_3298275_18 peroxidase activity - - - 0.00000000000000000009973 88.0
DYD1_k127_3298275_19 Helix-turn-helix domain - - - 0.0000000001393 64.0
DYD1_k127_3298275_2 Catalyzes the conversion of dihydroorotate to orotate K00226,K17828 GO:0003674,GO:0003824,GO:0004152,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006139,GO:0006206,GO:0006207,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009112,GO:0009987,GO:0016491,GO:0016627,GO:0016635,GO:0018130,GO:0019856,GO:0034641,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0044424,GO:0044464,GO:0046112,GO:0046483,GO:0055086,GO:0055114,GO:0071704,GO:0072527,GO:0072528,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576 1.3.1.14,1.3.98.1 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008286 511.0
DYD1_k127_3298275_20 Catalyzes the conversion of dethiobiotin (DTB) to biotin by the insertion of a sulfur atom into dethiobiotin via a radical- based mechanism K01012 - 2.8.1.6 0.0001073 46.0
DYD1_k127_3298275_21 Catalyzes the conversion of dethiobiotin (DTB) to biotin by the insertion of a sulfur atom into dethiobiotin via a radical- based mechanism K01012 - 2.8.1.6 0.0002152 45.0
DYD1_k127_3298275_3 Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family K02005 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006817 494.0
DYD1_k127_3298275_5 Evidence 2b Function of strongly homologous gene K02003 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001886 347.0
DYD1_k127_3298275_6 lipoprotein transporter activity K02003 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000001252 302.0
DYD1_k127_3298275_7 Phosphoribosyl transferase domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000006797 295.0
DYD1_k127_3298275_8 MraZ protein, putative antitoxin-like K03925 - - 0.0000000000000000000000000000000000000000000000000000000000000000000001884 240.0
DYD1_k127_3317363_0 Bifunctional nuclease K08999 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000004411 263.0
DYD1_k127_3317363_1 Bifunctional nuclease K03617,K08999 GO:0005575,GO:0005618,GO:0005623,GO:0005886,GO:0016020,GO:0030312,GO:0044464,GO:0071944 - 0.0000000000000000000000000000000000000000000000000001358 190.0
DYD1_k127_3317363_10 Probably plays a role in a hydrogenase nickel cofactor insertion step K04651 - - 0.0004482 48.0
DYD1_k127_3317363_2 Could be a mediator in iron transactions between iron acquisition and iron-requiring processes, such as synthesis and or repair of Fe-S clusters in biosynthetic enzymes - - - 0.000000000000000000000000000000000000000000008441 164.0
DYD1_k127_3317363_3 RNA recognition motif - - - 0.00000000000000000000000000000000000000001638 155.0
DYD1_k127_3317363_4 This protein is one of the early assembly proteins of the 50S ribosomal subunit, although it is not seen to bind rRNA by itself. It is important during the early stages of 50S assembly K02871 - - 0.0000000000000000000000000000000000018 143.0
DYD1_k127_3317363_6 TIGRFAM hydrogenase expression formation protein HypE K04655 - - 0.00000000000000000000000002736 109.0
DYD1_k127_3317363_9 RNA binding motif single stranded interacting protein - GO:0000003,GO:0002347,GO:0002357,GO:0003674,GO:0003676,GO:0003723,GO:0003727,GO:0003729,GO:0003730,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006417,GO:0006950,GO:0006952,GO:0007275,GO:0007399,GO:0007552,GO:0007610,GO:0007617,GO:0007618,GO:0007619,GO:0007626,GO:0008050,GO:0008143,GO:0008150,GO:0008187,GO:0008266,GO:0008344,GO:0009605,GO:0009607,GO:0009628,GO:0009629,GO:0009889,GO:0009890,GO:0009891,GO:0009892,GO:0009893,GO:0009966,GO:0009968,GO:0009987,GO:0010468,GO:0010556,GO:0010557,GO:0010558,GO:0010604,GO:0010605,GO:0010608,GO:0010628,GO:0010629,GO:0010646,GO:0010648,GO:0016322,GO:0017091,GO:0017148,GO:0019098,GO:0019222,GO:0019953,GO:0021700,GO:0022008,GO:0022414,GO:0023051,GO:0023057,GO:0030111,GO:0030154,GO:0030178,GO:0030182,GO:0030534,GO:0031323,GO:0031324,GO:0031325,GO:0031326,GO:0031327,GO:0031328,GO:0032268,GO:0032269,GO:0032270,GO:0032501,GO:0032502,GO:0032504,GO:0033554,GO:0034248,GO:0034249,GO:0034250,GO:0034976,GO:0035925,GO:0040011,GO:0042330,GO:0042332,GO:0042551,GO:0044424,GO:0044464,GO:0044703,GO:0045727,GO:0048468,GO:0048469,GO:0048518,GO:0048519,GO:0048522,GO:0048523,GO:0048583,GO:0048585,GO:0048609,GO:0048666,GO:0048699,GO:0048731,GO:0048856,GO:0048869,GO:0050789,GO:0050794,GO:0050896,GO:0051171,GO:0051172,GO:0051173,GO:0051246,GO:0051247,GO:0051248,GO:0051704,GO:0051716,GO:0060180,GO:0060255,GO:0060828,GO:0065007,GO:0070717,GO:0071695,GO:0080090,GO:0090090,GO:0097159,GO:1901363,GO:2000112,GO:2000113 - 0.00002301 49.0
DYD1_k127_3371447_0 MacB-like periplasmic core domain - - - 0.0000000000000000000000000000000000000000000000000000000004591 220.0
DYD1_k127_3371447_1 Outer membrane lipoprotein-sorting protein - - - 0.00000000000000000000000000000000000000000000000005972 182.0
DYD1_k127_3371447_2 MacB-like periplasmic core domain - - - 0.000004154 53.0
DYD1_k127_3384611_0 radical SAM domain protein - - - 1.214e-266 824.0
DYD1_k127_3384611_1 Zinc-binding dehydrogenase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006024 518.0
DYD1_k127_3384611_10 amine dehydrogenase activity - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003848 342.0
DYD1_k127_3384611_11 precorrin-2 dehydrogenase activity K02302,K02304 GO:0003674,GO:0003824,GO:0004851,GO:0006725,GO:0006778,GO:0006779,GO:0006783,GO:0006807,GO:0006950,GO:0006970,GO:0008150,GO:0008152,GO:0008168,GO:0008169,GO:0008757,GO:0009058,GO:0009628,GO:0009987,GO:0016740,GO:0016741,GO:0018130,GO:0019354,GO:0019438,GO:0032259,GO:0033013,GO:0033014,GO:0034641,GO:0042168,GO:0042440,GO:0044237,GO:0044249,GO:0044271,GO:0046148,GO:0046156,GO:0046483,GO:0050896,GO:0051186,GO:0051188,GO:0071704,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576 1.3.1.76,2.1.1.107,4.99.1.4 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000491 304.0
DYD1_k127_3384611_12 Responsible for the release of ribosomes from messenger RNA at the termination of protein biosynthesis. May increase the efficiency of translation by recycling ribosomes from one round of translation to another K02838 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000001466 284.0
DYD1_k127_3384611_13 Mo-molybdopterin cofactor metabolic process K03638 - 2.7.7.75 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000178 271.0
DYD1_k127_3384611_14 PFAM AIG2 family protein - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000779 264.0
DYD1_k127_3384611_15 This protein is one of the early assembly proteins of the 50S ribosomal subunit, although it is not seen to bind rRNA by itself. It is important during the early stages of 50S assembly K02871 - - 0.000000000000000000000000000000000000000000000000000000000000001666 220.0
DYD1_k127_3384611_16 Ferredoxin - - - 0.000000000000000000000000000000000000000000000000000000000009345 207.0
DYD1_k127_3384611_17 Belongs to the universal ribosomal protein uS9 family K02996 - - 0.0000000000000000000000000000000000000000000000000000007193 194.0
DYD1_k127_3384611_18 Domain in cystathionine beta-synthase and other proteins. - - - 0.0000000000000000000000000000000000000000000003448 169.0
DYD1_k127_3384611_19 Thiamine-binding protein - - - 0.0000000000000000000000000000000000000000000003951 170.0
DYD1_k127_3384611_2 Catalyzes the NADPH-dependent reduction of N-acetyl-5- glutamyl phosphate to yield N-acetyl-L-glutamate 5-semialdehyde K00145 - 1.2.1.38 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000359 506.0
DYD1_k127_3384611_3 Catalyzes two activities which are involved in the cyclic version of arginine biosynthesis the synthesis of N- acetylglutamate from glutamate and acetyl-CoA as the acetyl donor, and of ornithine by transacetylation between N(2)-acetylornithine and glutamate K00620 - 2.3.1.1,2.3.1.35 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000105 486.0
DYD1_k127_3384611_4 isomerase activity K06998 - 5.3.3.17 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000021 434.0
DYD1_k127_3384611_5 Catalyzes the reversible phosphorylation of UMP to UDP K09903 - 2.7.4.22 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007629 411.0
DYD1_k127_3384611_6 Belongs to the universal ribosomal protein uS2 family K02967 GO:0003674,GO:0003735,GO:0005198,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0006412,GO:0006518,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0015935,GO:0019538,GO:0022626,GO:0022627,GO:0032991,GO:0034641,GO:0034645,GO:0043043,GO:0043170,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:0071704,GO:1901564,GO:1901566,GO:1901576,GO:1990904 - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008642 405.0
DYD1_k127_3384611_7 Catalyzes the interconversion of L-alanine and D- alanine. May also act on other amino acids K01775 - 5.1.1.1 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000913 401.0
DYD1_k127_3384611_8 HNH nucleases - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003019 354.0
DYD1_k127_3384611_9 Associates with the EF-Tu.GDP complex and induces the exchange of GDP to GTP. It remains bound to the aminoacyl-tRNA.EF- Tu.GTP complex up to the GTP hydrolysis stage on the ribosome K02357 GO:0003674,GO:0003676,GO:0003723,GO:0003746,GO:0005488,GO:0006412,GO:0006414,GO:0006518,GO:0006807,GO:0008135,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0019538,GO:0034641,GO:0034645,GO:0043043,GO:0043170,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0071704,GO:0097159,GO:1901363,GO:1901564,GO:1901566,GO:1901576 - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001933 338.0
DYD1_k127_341075_1 actin binding - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005106 503.0
DYD1_k127_341075_2 2OG-Fe(II) oxygenase superfamily K07394 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001465 344.0
DYD1_k127_341075_3 TIGRFAM death-on-curing family protein K07341 - - 0.0000000000000000000000000003564 119.0
DYD1_k127_341075_4 cheY-homologous receiver domain - - - 0.000000000000000001218 92.0
DYD1_k127_3415903_0 DUF218 domain - - - 0.00000000000000000000000000000002128 135.0
DYD1_k127_3439707_1 Pfam Cupin K00450,K11948 - 1.13.11.38,1.13.11.4 0.0000000000000000000000000000000000000000000000000000000000000000004242 236.0
DYD1_k127_3439707_2 Bacterial extracellular solute-binding protein K02012 - - 0.0000000000000000001959 102.0
DYD1_k127_3439707_3 PFAM Cupin 2, conserved barrel domain protein K00450 - 1.13.11.4 0.000000000000000008308 87.0
DYD1_k127_3478313_0 ATPase, P-type (transporting), HAD superfamily, subfamily IC K01533,K17686 - 3.6.3.4,3.6.3.54 8.249e-234 734.0
DYD1_k127_3478313_1 ATPase, P-type (transporting), HAD superfamily, subfamily IC K01533,K17686 - 3.6.3.4,3.6.3.54 0.00000000000000000000000000000000000000000000000000000000000000000000000000005056 268.0
DYD1_k127_3478313_2 Rieske [2Fe-2S] domain K00411,K02636,K03886 - 1.10.2.2,1.10.9.1 0.00000000000000000000000000000000000000000000000000009066 190.0
DYD1_k127_3478313_3 Thioredoxin-like K02199,K03671 - - 0.000000000000000000000004219 105.0
DYD1_k127_3478313_4 - - - - 0.000000000000000000127 93.0
DYD1_k127_3478313_5 pfam yhs - - - 0.0000000000000007555 79.0
DYD1_k127_3478313_6 NfeD-like C-terminal, partner-binding - - - 0.00003051 52.0
DYD1_k127_3482036_0 Polysaccharide biosynthesis protein - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001555 521.0
DYD1_k127_3482036_1 Belongs to the UDP-N-acetylglucosamine 2-epimerase family K01791,K13019 - 5.1.3.14,5.1.3.23 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002701 515.0
DYD1_k127_3482036_2 Glycosyl transferases group 1 - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003493 473.0
DYD1_k127_3482036_3 RmlD substrate binding domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003886 347.0
DYD1_k127_348487_0 AcrB/AcrD/AcrF family - - - 0.0 1724.0
DYD1_k127_348487_1 Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family K07787,K15726 - - 0.0 1345.0
DYD1_k127_348487_10 NmrA-like family K00091 - 1.1.1.219 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009883 549.0
DYD1_k127_348487_12 Protein of unknown function (DUF2914) - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003406 473.0
DYD1_k127_348487_13 lysyltransferase activity K07027 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000637 425.0
DYD1_k127_348487_14 Carotenoid biosynthesis protein - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003362 387.0
DYD1_k127_348487_15 Nucleotidyl transferase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007276 371.0
DYD1_k127_348487_16 Belongs to the TPP enzyme family K09459 - 4.1.1.82 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002379 358.0
DYD1_k127_348487_17 Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family K07798,K15727 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009792 352.0
DYD1_k127_348487_18 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain K09459 - 4.1.1.82 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000004961 277.0
DYD1_k127_348487_19 Belongs to the DNA glycosylase MPG family K03652 GO:0003674,GO:0003824,GO:0003905,GO:0006139,GO:0006259,GO:0006281,GO:0006284,GO:0006725,GO:0006807,GO:0006950,GO:0006974,GO:0008150,GO:0008152,GO:0009987,GO:0016787,GO:0016798,GO:0016799,GO:0019104,GO:0033554,GO:0034641,GO:0043170,GO:0044237,GO:0044238,GO:0044260,GO:0046483,GO:0050896,GO:0051716,GO:0071704,GO:0090304,GO:0140097,GO:1901360 3.2.2.21 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000001323 278.0
DYD1_k127_348487_2 TonB-dependent receptor - - - 0.0 1048.0
DYD1_k127_348487_20 Bacterial regulatory proteins, tetR family - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000008623 279.0
DYD1_k127_348487_21 Cytochrome c K03611 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000002389 253.0
DYD1_k127_348487_22 - - - - 0.000000000000000000000000000000000000000000000000000000000000000000005194 240.0
DYD1_k127_348487_23 Outer membrane efflux protein - - - 0.00000000000000000000000000000000000000000000000000000000000000000002272 251.0
DYD1_k127_348487_24 response to nickel cation K07722 GO:0000976,GO:0000984,GO:0000985,GO:0001017,GO:0001046,GO:0001047,GO:0001067,GO:0001130,GO:0001217,GO:0003674,GO:0003676,GO:0003677,GO:0003690,GO:0003700,GO:0005488,GO:0005515,GO:0005575,GO:0006355,GO:0008150,GO:0009889,GO:0009890,GO:0009892,GO:0009987,GO:0010468,GO:0010556,GO:0010558,GO:0010605,GO:0010629,GO:0016043,GO:0016151,GO:0019219,GO:0019222,GO:0022607,GO:0031323,GO:0031324,GO:0031326,GO:0031327,GO:0031333,GO:0032991,GO:0032993,GO:0042802,GO:0043167,GO:0043169,GO:0043254,GO:0043565,GO:0043933,GO:0044085,GO:0044087,GO:0044212,GO:0045892,GO:0045934,GO:0046872,GO:0046914,GO:0048519,GO:0048523,GO:0050789,GO:0050794,GO:0051128,GO:0051129,GO:0051171,GO:0051172,GO:0051252,GO:0051253,GO:0051259,GO:0051260,GO:0051262,GO:0051289,GO:0060255,GO:0065003,GO:0065007,GO:0071840,GO:0080090,GO:0097159,GO:0140110,GO:1901363,GO:1902679,GO:1903506,GO:1903507,GO:1990837,GO:2000112,GO:2000113,GO:2000142,GO:2000143,GO:2001141 - 0.00000000000000000000000000000000000000000000000000000000000000002965 226.0
DYD1_k127_348487_25 Catalyzes the decarboxylation of S-adenosylmethionine to S-adenosylmethioninamine (dcAdoMet), the propylamine donor required for the synthesis of the polyamines spermine and spermidine from the diamine putrescine K00797,K01611 - 2.5.1.16,4.1.1.50 0.0000000000000000000000000000000000000000000000000000001888 198.0
DYD1_k127_348487_3 His Kinase A (phosphoacceptor) domain K02482 - 2.7.13.3 7.234e-251 787.0
DYD1_k127_348487_30 Protein conserved in bacteria - - - 0.00000000000000000000000000000000000000001736 162.0
DYD1_k127_348487_31 Mycobacterial 4 TMS phage holin, superfamily IV K08972 - - 0.000000000000000000000000000000000000003815 150.0
DYD1_k127_348487_32 Sterol carrier protein - - - 0.00000000000000000000000000000000000001378 147.0
DYD1_k127_348487_35 - - - - 0.000000000000000000000001261 112.0
DYD1_k127_348487_37 Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family K07787 - - 0.000000000003484 67.0
DYD1_k127_348487_4 Evidence 2a Function of homologous gene experimentally demonstrated in an other organism K04771 - 3.4.21.107 1.635e-221 696.0
DYD1_k127_348487_5 TIGRFAM phosphoenolpyruvate phosphomutase K01841 - 5.4.2.9 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006753 599.0
DYD1_k127_348487_6 Evidence 2b Function of strongly homologous gene K01740,K03430,K05306,K09469 GO:0003674,GO:0003824 2.5.1.49,2.6.1.37,3.11.1.1 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007709 571.0
DYD1_k127_348487_7 HlyD family secretion protein K03585 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003086 565.0
DYD1_k127_348487_8 COG1208 Nucleoside-diphosphate-sugar pyrophosphorylase involved in lipopolysaccharide biosynthesis translation initiation factor 2B, gamma epsilon subunits eIF-2Bgamma eIF-2Bepsilon K00992 - 2.7.7.99 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000445 563.0
DYD1_k127_348487_9 Polyprenyl synthetase K13789 - 2.5.1.1,2.5.1.10,2.5.1.29 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007105 548.0
DYD1_k127_3536392_0 Glycosyl transferases group 1 - - - 0.0000000000000000000000000000000000000000000000000131 187.0
DYD1_k127_3536392_1 Phosphoribosyl transferase domain K00762 - 2.4.2.10 0.000000000000000000000000000000000000001598 163.0
DYD1_k127_3536392_2 PFAM Glycosyl transferases group 1 - - - 0.0000000000000000000000000000000000001256 150.0
DYD1_k127_3536392_3 ADP-glyceromanno-heptose 6-epimerase activity - - - 0.000000000000000000000000000000001259 145.0
DYD1_k127_3536392_4 Glycosyl transferase, family 2 K20444 - - 0.00000000000000000000000000000009471 136.0
DYD1_k127_3536392_5 Methionine biosynthesis protein MetW - - - 0.0000000000000000000000000002614 128.0
DYD1_k127_3536392_6 Mycolic acid cyclopropane synthetase - - - 0.00000000000000001978 92.0
DYD1_k127_3536392_7 PFAM Glycosyl transferase family 2 - - - 0.0000000002462 72.0
DYD1_k127_3559711_0 Putative outer membrane beta-barrel porin, MtrB/PioB - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003434 612.0
DYD1_k127_3559711_1 Doubled CXXCH motif (Paired_CXXCH_1) - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001552 387.0
DYD1_k127_3559711_2 PFAM Transketolase central region K00162,K21417 - 1.2.4.1 0.00004465 50.0
DYD1_k127_357028_0 aerobic electron transport chain K00425,K08738 - 1.10.3.14 0.0 1158.0
DYD1_k127_357028_1 Cytochrome c K00405 - - 2.928e-304 942.0
DYD1_k127_357028_2 Cytochrome c K00405 - - 8.135e-212 664.0
DYD1_k127_357028_3 Cytochrome c - - - 4.367e-199 624.0
DYD1_k127_357028_4 Evidence 4 Homologs of previously reported genes of K18912 - 1.14.99.50 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000242 407.0
DYD1_k127_357028_5 Transfers a GMP moiety from GTP to Mo-molybdopterin (Mo- MPT) cofactor (Moco or molybdenum cofactor) to form Mo- molybdopterin guanine dinucleotide (Mo-MGD) cofactor K03752 - 2.7.7.77 0.00000000000000000000000000000000000000001326 158.0
DYD1_k127_3573523_0 Catalyzes the attachment of alanine to tRNA(Ala) in a two-step reaction alanine is first activated by ATP to form Ala- AMP and then transferred to the acceptor end of tRNA(Ala). Also edits incorrectly charged Ser-tRNA(Ala) and Gly-tRNA(Ala) via its editing domain K01872 - 6.1.1.7 0.0 1389.0
DYD1_k127_3573523_1 amino acids such as threonine, to avoid such errors, it has a posttransfer editing activity that hydrolyzes mischarged Thr-tRNA(Val) in a tRNA-dependent manner K01873 - 6.1.1.9 0.0 1230.0
DYD1_k127_3573523_10 phosphopentomutase activity K01839 GO:0003674,GO:0003824,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006139,GO:0006725,GO:0006753,GO:0006793,GO:0006796,GO:0006807,GO:0006950,GO:0006974,GO:0008150,GO:0008152,GO:0008973,GO:0009056,GO:0009058,GO:0009117,GO:0009166,GO:0009262,GO:0009264,GO:0009987,GO:0016853,GO:0016866,GO:0016868,GO:0018130,GO:0019438,GO:0019439,GO:0019637,GO:0033554,GO:0034404,GO:0034641,GO:0034654,GO:0034655,GO:0044237,GO:0044238,GO:0044248,GO:0044249,GO:0044270,GO:0044271,GO:0044281,GO:0044283,GO:0044424,GO:0044444,GO:0044464,GO:0046434,GO:0046483,GO:0046700,GO:0050896,GO:0051716,GO:0055086,GO:0071704,GO:1901135,GO:1901136,GO:1901292,GO:1901360,GO:1901361,GO:1901362,GO:1901575,GO:1901576 5.4.2.7 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004284 388.0
DYD1_k127_3573523_11 Catalyzes the phosphorylation of pantothenate (Pan), the first step in CoA biosynthesis K03525 - 2.7.1.33 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003467 368.0
DYD1_k127_3573523_12 Photosynthesis system II assembly factor YCF48 - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001727 350.0
DYD1_k127_3573523_13 Catalyzes the NADPH-dependent reduction of ketopantoate into pantoic acid K00077 - 1.1.1.169 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006752 325.0
DYD1_k127_3573523_14 phosphatase activity K07025 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001058 328.0
DYD1_k127_3573523_15 Quinolinate phosphoribosyl transferase, C-terminal domain K00767 - 2.4.2.19 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001481 315.0
DYD1_k127_3573523_16 Response regulator, receiver - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000006167 301.0
DYD1_k127_3573523_17 Required for formate dehydrogenase (FDH) activity. Acts as a sulfur carrier protein that transfers sulfur from IscS to the molybdenum cofactor prior to its insertion into FDH K02379 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000002136 286.0
DYD1_k127_3573523_18 Hydrolyzes RNA 2',3'-cyclic phosphodiester to an RNA 2'- phosphomonoester K01975 - 3.1.4.58 0.00000000000000000000000000000000000000000000000000000000000000000000001292 246.0
DYD1_k127_3573523_19 Biotin/lipoate A/B protein ligase family K03524 - 6.3.4.15 0.000000000000000000000000000000000000000000000000000000000000001578 227.0
DYD1_k127_3573523_2 Heat shock 70 kDa protein K04043 - - 0.0 1103.0
DYD1_k127_3573523_20 Participates actively in the response to hyperosmotic and heat shock by preventing the aggregation of stress-denatured proteins, in association with DnaK and GrpE. It is the nucleotide exchange factor for DnaK and may function as a thermosensor. Unfolded proteins bind initially to DnaJ K03687 - - 0.0000000000000000000000000000000000000000000000000000000000001461 217.0
DYD1_k127_3573523_21 Endoribonuclease L-PSP - - - 0.00000000000000000000000000000000000000000000000000000000001168 209.0
DYD1_k127_3573523_22 Specifically methylates the N3 position of the uracil ring of uridine 1498 (m3U1498) in 16S rRNA. Acts on the fully assembled 30S ribosomal subunit K09761 - 2.1.1.193 0.0000000000000000000000000000000000000000000000000000000009659 209.0
DYD1_k127_3573523_24 Could be a nuclease involved in processing of the 5'-end of pre-16S rRNA K07447 - - 0.00000000000000000000000000000000000000000000000000001814 196.0
DYD1_k127_3573523_25 peroxidase activity - - - 0.00000000000000000000000000000000000001009 146.0
DYD1_k127_3573523_26 regulation of DNA repair K03565,K19002 GO:0003674,GO:0005488,GO:0005515,GO:0006950,GO:0006974,GO:0007154,GO:0008150,GO:0009432,GO:0009605,GO:0009987,GO:0009991,GO:0019899,GO:0031668,GO:0033554,GO:0043086,GO:0044092,GO:0050790,GO:0050896,GO:0051716,GO:0065007,GO:0065009,GO:0071496 2.4.1.337 0.0000000000000000000000000000000002383 138.0
DYD1_k127_3573523_27 - - - - 0.000000000000000000000000009699 113.0
DYD1_k127_3573523_28 Binds to Cpn60 in the presence of Mg-ATP and suppresses the ATPase activity of the latter K04078 - - 0.000000000000000000003162 98.0
DYD1_k127_3573523_29 - - - - 0.000000000000000003918 88.0
DYD1_k127_3573523_3 Belongs to the prokaryotic molybdopterin-containing oxidoreductase family K00372,K02567 - - 3.007e-284 893.0
DYD1_k127_3573523_33 Catalyzes a reversible aldol reaction between acetaldehyde and D-glyceraldehyde 3-phosphate to generate 2-deoxy- D-ribose 5-phosphate K01619 - 4.1.2.4 0.0006972 44.0
DYD1_k127_3573523_4 guanyl-nucleotide exchange factor activity - - - 7.015e-222 702.0
DYD1_k127_3573523_5 Can catalyze the hydrolysis of ATP in the presence of single-stranded DNA, the ATP-dependent uptake of single-stranded DNA by duplex DNA, and the ATP-dependent hybridization of homologous single-stranded DNAs. It interacts with LexA causing its activation and leading to its autocatalytic cleavage K03553 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003124 603.0
DYD1_k127_3573523_6 Competence-damaged protein K03742,K03743 - 3.5.1.42 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000141 523.0
DYD1_k127_3573523_7 Functions as a peptidoglycan terminase that cleaves nascent peptidoglycan strands endolytically to terminate their elongation K07082 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000158 432.0
DYD1_k127_3573523_8 DnaJ central domain K03686 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001571 411.0
DYD1_k127_3573523_9 Belongs to the sirtuin family. Class K12410 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001515 394.0
DYD1_k127_3587369_0 Aconitase C-terminal domain K01681 - 4.2.1.3 0.0 1385.0
DYD1_k127_3587369_1 Isocitrate dehydrogenase K00031 - 1.1.1.42 0.0 1313.0
DYD1_k127_3587369_10 PERMEase K06901 - - 9.455e-227 712.0
DYD1_k127_3587369_11 Cell division protein that is involved in the assembly of the Z ring. May serve as a membrane anchor for the Z ring K03590 - - 2.166e-215 676.0
DYD1_k127_3587369_12 Essential cell division protein that forms a contractile ring structure (Z ring) at the future cell division site. The regulation of the ring assembly controls the timing and the location of cell division. One of the functions of the FtsZ ring is to recruit other cell division proteins to the septum to produce a new cell wall between the dividing cells. Binds GTP and shows GTPase activity K03531 - - 1.54e-197 621.0
DYD1_k127_3587369_13 Type II secretion system (T2SS), protein F K02455,K02653 - - 5.166e-197 621.0
DYD1_k127_3587369_14 Evidence 2a Function of homologous gene experimentally demonstrated in an other organism K00170 - 1.2.7.1 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004852 585.0
DYD1_k127_3587369_15 heme binding K00463 - 1.13.11.52 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005849 562.0
DYD1_k127_3587369_16 Succinyl-CoA synthetase functions in the citric acid cycle (TCA), coupling the hydrolysis of succinyl-CoA to the synthesis of either ATP or GTP and thus represents the only step of substrate-level phosphorylation in the TCA. The alpha subunit of the enzyme binds the substrates coenzyme A and phosphate, while succinate binding and nucleotide specificity is provided by the beta subunit K01902 - 6.2.1.5 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004096 536.0
DYD1_k127_3587369_17 Catalyzes the reversible formation of acyl-phosphate (acyl-PO(4)) from acyl- acyl-carrier-protein (acyl-ACP). This enzyme utilizes acyl-ACP as fatty acyl donor, but not acyl-CoA K03621 - 2.3.1.15 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004242 535.0
DYD1_k127_3587369_18 Involved in the biosynthesis of the central metabolite phospho-alpha-D-ribosyl-1-pyrophosphate (PRPP) via the transfer of pyrophosphoryl group from ATP to 1-hydroxyl of ribose-5-phosphate (Rib-5-P) K00948 - 2.7.6.1 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001536 514.0
DYD1_k127_3587369_19 Catalyzes the condensation reaction of fatty acid synthesis by the addition to an acyl acceptor of two carbons from malonyl-ACP. Catalyzes the first condensation reaction which initiates fatty acid synthesis and may therefore play a role in governing the total rate of fatty acid production. Possesses both acetoacetyl-ACP synthase and acetyl transacylase activities. Its substrate specificity determines the biosynthesis of branched- chain and or straight-chain of fatty acids K00648 - 2.3.1.180 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002591 507.0
DYD1_k127_3587369_2 Belongs to the citrate synthase family K01902,K15230,K15233 - 2.3.3.8,6.2.1.5 0.0 1150.0
DYD1_k127_3587369_20 Catalyzes the oxidation of 5,10- methylenetetrahydrofolate to 5,10-methenyltetrahydrofolate and then the hydrolysis of 5,10-methenyltetrahydrofolate to 10- formyltetrahydrofolate K01491 GO:0003674,GO:0003824,GO:0004477,GO:0004488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006730,GO:0008150,GO:0008152,GO:0009987,GO:0016491,GO:0016645,GO:0016646,GO:0016787,GO:0016810,GO:0016814,GO:0019238,GO:0044237,GO:0044281,GO:0044424,GO:0044444,GO:0044464,GO:0055114 1.5.1.5,3.5.4.9 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009524 506.0
DYD1_k127_3587369_21 Methylenetetrahydrofolate reductase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001364 506.0
DYD1_k127_3587369_22 response regulator K02667 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004081 509.0
DYD1_k127_3587369_23 Evidence 2a Function of homologous gene experimentally demonstrated in an other organism K02040 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002718 494.0
DYD1_k127_3587369_24 Acyl transferase domain K00645 - 2.3.1.39 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003747 462.0
DYD1_k127_3587369_25 Pyruvate ferredoxin/flavodoxin oxidoreductase K00172 - 1.2.7.1 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001767 456.0
DYD1_k127_3587369_26 4Fe-4S ferredoxin iron-sulfur binding domain protein - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004082 453.0
DYD1_k127_3587369_27 Cell wall formation K01921 - 6.3.2.4 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001907 452.0
DYD1_k127_3587369_28 Cell wall formation K00075 - 1.3.1.98 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001324 432.0
DYD1_k127_3587369_29 Catalyzes the reversible reaction in which hydroxymethyl group from 5,10-methylenetetrahydrofolate is transferred onto alpha-ketoisovalerate to form ketopantoate K00606 - 2.1.2.11 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002264 413.0
DYD1_k127_3587369_3 FAD binding domain K00239 - 1.3.5.1,1.3.5.4 5.313e-316 970.0
DYD1_k127_3587369_30 Evidence 2a Function of homologous gene experimentally demonstrated in an other organism K00059 - 1.1.1.100 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002431 402.0
DYD1_k127_3587369_31 Beta-lactamase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009785 405.0
DYD1_k127_3587369_32 ATPase that binds to both the 70S ribosome and the 50S ribosomal subunit in a nucleotide-independent manner K06942 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004407 393.0
DYD1_k127_3587369_33 6-phosphogluconolactonase activity - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001084 374.0
DYD1_k127_3587369_34 Formamidopyrimidine-DNA glycosylase H2TH domain K10563 - 3.2.2.23,4.2.99.18 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002074 351.0
DYD1_k127_3587369_35 - - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002479 337.0
DYD1_k127_3587369_36 Catalyzes the phosphorylation of the position 2 hydroxy group of 4-diphosphocytidyl-2C-methyl-D-erythritol K00919 GO:0003674,GO:0003824,GO:0006793,GO:0006796,GO:0008150,GO:0008152,GO:0009987,GO:0016301,GO:0016310,GO:0016740,GO:0016772,GO:0016773,GO:0044237,GO:0050515 2.7.1.148 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002182 332.0
DYD1_k127_3587369_37 Isochorismatase family - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002352 331.0
DYD1_k127_3587369_38 Catalyzes the reduction of 1-pyrroline-5-carboxylate (PCA) to L-proline K00286 - 1.5.1.2 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007734 319.0
DYD1_k127_3587369_39 phosphoprotein phosphatase activity K01525 GO:0003674,GO:0003824,GO:0004551,GO:0004721,GO:0006139,GO:0006464,GO:0006470,GO:0006725,GO:0006793,GO:0006796,GO:0006807,GO:0008138,GO:0008150,GO:0008152,GO:0008796,GO:0008803,GO:0009314,GO:0009628,GO:0009987,GO:0010165,GO:0010212,GO:0015949,GO:0016311,GO:0016462,GO:0016787,GO:0016788,GO:0016791,GO:0016817,GO:0016818,GO:0019538,GO:0034641,GO:0036211,GO:0042578,GO:0043170,GO:0043412,GO:0044237,GO:0044238,GO:0044260,GO:0044267,GO:0044281,GO:0046483,GO:0050896,GO:0055086,GO:0071704,GO:0140096,GO:1901360,GO:1901564 3.6.1.41 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002008 307.0
DYD1_k127_3587369_4 phosphorelay sensor kinase activity K02668 - 2.7.13.3 1.999e-261 815.0
DYD1_k127_3587369_40 This is one of the proteins that binds to the 5S RNA in the ribosome where it forms part of the central protuberance K02897 GO:0003674,GO:0003676,GO:0003723,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0006412,GO:0006518,GO:0006807,GO:0008097,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0015934,GO:0019538,GO:0019843,GO:0022625,GO:0022626,GO:0032991,GO:0034641,GO:0034645,GO:0043043,GO:0043170,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:0071704,GO:0097159,GO:1901363,GO:1901564,GO:1901566,GO:1901576,GO:1990904 - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000283 304.0
DYD1_k127_3587369_41 Protein of unknown function (DUF429) K09147 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000008165 285.0
DYD1_k127_3587369_42 Belongs to the multicopper oxidase YfiH RL5 family K05810 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000002248 284.0
DYD1_k127_3587369_43 The natural substrate for this enzyme may be peptidyl- tRNAs which drop off the ribosome during protein synthesis K01056 GO:0003674,GO:0003824,GO:0004045,GO:0016787,GO:0016788,GO:0052689,GO:0140098,GO:0140101 3.1.1.29 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000002077 278.0
DYD1_k127_3587369_44 Pyridoxal 5'-phosphate (PLP)-binding protein, which is involved in PLP homeostasis K06997 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000002452 277.0
DYD1_k127_3587369_45 Digests double-stranded RNA. Involved in the processing of primary rRNA transcript to yield the immediate precursors to the large and small rRNAs (23S and 16S). Processes some mRNAs, and tRNAs when they are encoded in the rRNA operon. Processes pre- crRNA and tracrRNA of type II CRISPR loci if present in the organism K03685 - 3.1.26.3 0.000000000000000000000000000000000000000000000000000000000000000000000000000000006672 276.0
DYD1_k127_3587369_46 PPIases accelerate the folding of proteins. It catalyzes the cis-trans isomerization of proline imidic peptide bonds in oligopeptides K03767,K03768 - 5.2.1.8 0.000000000000000000000000000000000000000000000000000000000000000000000000000002904 266.0
DYD1_k127_3587369_47 Protein of unknown function (DUF2459) - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000007706 264.0
DYD1_k127_3587369_48 diguanylate cyclase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000002587 257.0
DYD1_k127_3587369_49 Catalyzes the NADPH-dependent reduction of 7-cyano-7- deazaguanine (preQ0) to 7-aminomethyl-7-deazaguanine (preQ1) K09457 - 1.7.1.13 0.0000000000000000000000000000000000000000000000000000000000000000001182 232.0
DYD1_k127_3587369_5 Pyruvate:ferredoxin oxidoreductase core domain II K00169 - 1.2.7.1 7.767e-261 807.0
DYD1_k127_3587369_50 Oxidoreductase - - - 0.00000000000000000000000000000000000000000000000000000000000007991 214.0
DYD1_k127_3587369_51 DivIVA protein K04074 - - 0.0000000000000000000000000000000000000000000000000000000000001031 216.0
DYD1_k127_3587369_52 Single-strand binding protein family K03111 - - 0.0000000000000000000000000000000000000000000000000000000000001172 215.0
DYD1_k127_3587369_53 CDP-alcohol phosphatidyltransferase K08744 - 2.7.8.41 0.00000000000000000000000000000000000000000000000000005036 192.0
DYD1_k127_3587369_54 Essential cell division protein. May link together the upstream cell division proteins, which are predominantly cytoplasmic, with the downstream cell division proteins, which are predominantly periplasmic. May control correct divisome assembly K01921,K03589,K06438 GO:0000003,GO:0000278,GO:0000281,GO:0000910,GO:0000917,GO:0003674,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005886,GO:0005887,GO:0007049,GO:0008150,GO:0009987,GO:0016020,GO:0016021,GO:0016043,GO:0019954,GO:0022402,GO:0022414,GO:0022607,GO:0031224,GO:0031226,GO:0032153,GO:0032505,GO:0032506,GO:0040007,GO:0042802,GO:0043093,GO:0044085,GO:0044424,GO:0044425,GO:0044444,GO:0044459,GO:0044464,GO:0051301,GO:0061640,GO:0071840,GO:0071944,GO:0090529,GO:1902410,GO:1903047 6.3.2.4 0.000000000000000000000000000000000000000000000000000149 197.0
DYD1_k127_3587369_56 phosphatase - - - 0.0000000000000000000000000000000000000000000003581 171.0
DYD1_k127_3587369_57 Mitochondrial small ribosomal subunit Rsm22 - - - 0.0000000000000000000000000000000000000000000408 168.0
DYD1_k127_3587369_59 Uncharacterized ACR, COG1399 K07040 - - 0.000000000000000000000000000000000000000002459 164.0
DYD1_k127_3587369_6 Belongs to the MurCDEF family K01924 - 6.3.2.8 4.527e-250 778.0
DYD1_k127_3587369_61 Binds together with S18 to 16S ribosomal RNA K02990 - - 0.0000000000000000000000000000000000006005 143.0
DYD1_k127_3587369_62 Carrier of the growing fatty acid chain in fatty acid biosynthesis K02078 - - 0.0000000000000000000000000000000004218 133.0
DYD1_k127_3587369_63 Cell wall formation. Catalyzes the transfer of a GlcNAc subunit on undecaprenyl-pyrophosphoryl-MurNAc-pentapeptide (lipid intermediate I) to form undecaprenyl-pyrophosphoryl-MurNAc- (pentapeptide)GlcNAc (lipid intermediate II) K02563 - 2.4.1.227 0.00000000000000000000000000006383 118.0
DYD1_k127_3587369_64 YGGT family K02221 - - 0.00000000000000000000000000008012 118.0
DYD1_k127_3587369_65 VIT family - - - 0.000000000000000000000000000215 126.0
DYD1_k127_3587369_67 Binds as a heterodimer with protein S6 to the central domain of the 16S rRNA, where it helps stabilize the platform of the 30S subunit K02963 GO:0003674,GO:0003735,GO:0005198,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0006412,GO:0006518,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0015935,GO:0019538,GO:0022626,GO:0022627,GO:0032991,GO:0034641,GO:0034645,GO:0043043,GO:0043170,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:0071704,GO:1901564,GO:1901566,GO:1901576,GO:1990904 - 0.000000000000000000006238 94.0
DYD1_k127_3587369_69 Mitochondrial small ribosomal subunit Rsm22 - - - 0.0000000000000003762 84.0
DYD1_k127_3587369_7 Catalyzes the condensation reaction of fatty acid synthesis by the addition to an acyl acceptor of two carbons from malonyl-ACP K09458 - 2.3.1.179 1.804e-241 749.0
DYD1_k127_3587369_70 Belongs to the bacterial ribosomal protein bL32 family K02911 GO:0000027,GO:0000302,GO:0003674,GO:0003735,GO:0005198,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0006412,GO:0006518,GO:0006807,GO:0006950,GO:0006979,GO:0006996,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009314,GO:0009628,GO:0009987,GO:0010467,GO:0015934,GO:0016043,GO:0019538,GO:0022607,GO:0022613,GO:0022618,GO:0022625,GO:0022626,GO:0032991,GO:0034622,GO:0034641,GO:0034645,GO:0042221,GO:0042254,GO:0042255,GO:0042273,GO:0043043,GO:0043170,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043603,GO:0043604,GO:0043933,GO:0044085,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:0050896,GO:0065003,GO:0070925,GO:0071704,GO:0071826,GO:0071840,GO:1901564,GO:1901566,GO:1901576,GO:1901700,GO:1990904 - 0.0000000000000003914 79.0
DYD1_k127_3587369_72 Mitochondrial small ribosomal subunit Rsm22 - - - 0.00000001223 57.0
DYD1_k127_3587369_73 COG2801 Transposase and inactivated derivatives K07497 - - 0.0003405 46.0
DYD1_k127_3587369_74 ATPase that binds to both the 70S ribosome and the 50S ribosomal subunit in a nucleotide-independent manner K06942 - - 0.0004362 43.0
DYD1_k127_3587369_8 Succinyl-CoA synthetase functions in the citric acid cycle (TCA), coupling the hydrolysis of succinyl-CoA to the synthesis of either ATP or GTP and thus represents the only step of substrate-level phosphorylation in the TCA. The beta subunit provides nucleotide specificity of the enzyme and binds the substrate succinate, while the binding sites for coenzyme A and phosphate are found in the alpha subunit K01903 - 6.2.1.5 4.703e-235 729.0
DYD1_k127_3587369_9 ATP citrate lyase citrate-binding K15231 - 2.3.3.8 2.392e-231 720.0
DYD1_k127_359678_0 Domain of unknown function (DUF4105) - - - 2.353e-311 965.0
DYD1_k127_359678_1 peptidyl-tyrosine sulfation - - - 6.511e-198 666.0
DYD1_k127_359678_10 Calcineurin-like phosphoesterase superfamily domain K07095 - - 0.0000000000000000000000000000002212 129.0
DYD1_k127_359678_12 acyl carrier protein K02078 - - 0.00000000000000000000008836 101.0
DYD1_k127_359678_13 Participates in the translocation of lipoproteins from the inner membrane to the outer membrane. Only forms a complex with a lipoprotein if the residue after the N-terminal Cys is not an aspartate (The Asp acts as a targeting signal to indicate that the lipoprotein should stay in the inner membrane) - - - 0.00002144 51.0
DYD1_k127_359678_2 Evidence 3 Function proposed based on presence of conserved amino acid motif, structural feature or limited homology - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006084 460.0
DYD1_k127_359678_3 AMP-binding enzyme - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001034 436.0
DYD1_k127_359678_4 Mitochondrial biogenesis AIM24 - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002938 400.0
DYD1_k127_359678_5 Amidohydrolase K07045 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000001452 308.0
DYD1_k127_359678_6 Bacterial lipid A biosynthesis acyltransferase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000009137 291.0
DYD1_k127_359678_7 Protein of unknown function (DUF3015) - - - 0.00000000000000000000000000000000000000000000000000000000000000000000005253 244.0
DYD1_k127_359678_8 protein transport across the cell outer membrane K02453,K03219 - - 0.00000000000000000000000000000000000000000000000000000000000000000003579 252.0
DYD1_k127_359678_9 Methyltransferase required for the conversion of demethylmenaquinol (DMKH2) to menaquinol (MKH2) and the conversion of 2-polyprenyl-6-methoxy-1,4-benzoquinol (DDMQH2) to 2- polyprenyl-3-methyl-6-methoxy-1,4-benzoquinol (DMQH2) K03183 - 2.1.1.163,2.1.1.201 0.00000000000000000000000000000000000000000000000000000000004481 217.0
DYD1_k127_3612281_0 Subunit R is required for both nuclease and ATPase activities, but not for modification K01153 - 3.1.21.3 0.0 1444.0
DYD1_k127_3612281_1 HsdM N-terminal domain K03427 - 2.1.1.72 2.416e-269 836.0
DYD1_k127_3612281_2 AAA domain - - - 2.859e-228 732.0
DYD1_k127_3612281_3 Protein of unknown function (DUF1524) - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001119 604.0
DYD1_k127_3612281_4 Type I restriction modification DNA specificity domain K01154 - 3.1.21.3 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005173 524.0
DYD1_k127_3612281_5 Subunit R is required for both nuclease and ATPase activities, but not for modification K01153 - 3.1.21.3 0.00000000000000000000000000003506 120.0
DYD1_k127_3612281_7 - - - - 0.0000000000000000000001035 103.0
DYD1_k127_3640899_0 FGGY family of carbohydrate kinases, N-terminal domain K00854 - 2.7.1.17 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008414 375.0
DYD1_k127_3640899_1 Bacterial extracellular solute-binding protein - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000001329 293.0
DYD1_k127_3640899_2 Binding-protein-dependent transport system inner membrane component K02025 - - 0.00000000000000000000000000000000000000000000000000000000000000000000001298 251.0
DYD1_k127_3640899_3 DeoR C terminal sensor domain - - - 0.0000000000000000000000000000000000000000000000005155 185.0
DYD1_k127_3659993_0 Molydopterin dinucleotide binding domain K00123 - 1.17.1.9 0.0 1316.0
DYD1_k127_3659993_1 NADH-quinone oxidoreductase K00341 - 1.6.5.3 5e-324 1000.0
DYD1_k127_3659993_10 Tetratricopeptide repeat - - - 0.000000003419 69.0
DYD1_k127_3659993_2 NADH-ubiquinone oxidoreductase-F iron-sulfur binding region K00335 - 1.6.5.3 5.053e-256 792.0
DYD1_k127_3659993_3 Evidence 2a Function of homologous gene experimentally demonstrated in an other organism K00342 - 1.6.5.3 8.519e-234 732.0
DYD1_k127_3659993_4 NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient K00343 - 1.6.5.3 1.51e-209 664.0
DYD1_k127_3659993_5 NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient. This subunit may bind ubiquinone K00337 - 1.6.5.3 5.847e-197 617.0
DYD1_k127_3659993_6 NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient K00338 - 1.6.5.3 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003769 348.0
DYD1_k127_3659993_7 Virulence factor BrkB K07058 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003829 331.0
DYD1_k127_3659993_8 Belongs to the complex I subunit 6 family K00339 - 1.6.5.3 0.0000000000000000000000000000000000000000000000000002616 190.0
DYD1_k127_3659993_9 NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient K00340 GO:0003674,GO:0003824,GO:0003954,GO:0005575,GO:0005623,GO:0005886,GO:0008137,GO:0008150,GO:0008152,GO:0016020,GO:0016491,GO:0016651,GO:0016655,GO:0030964,GO:0032991,GO:0044425,GO:0044459,GO:0044464,GO:0045271,GO:0045272,GO:0050136,GO:0055114,GO:0070469,GO:0070470,GO:0071944,GO:0098796,GO:0098797,GO:0098803,GO:1902494,GO:1990204 1.6.5.3 0.0000000000000000000000000000000000001463 143.0
DYD1_k127_3675880_0 Multicopper oxidase K00368,K07233,K22349 - 1.16.3.3,1.7.2.1 0.0 3026.0
DYD1_k127_3675880_1 Type II/IV secretion system protein K02454,K02652 - - 0.0 1173.0
DYD1_k127_3675880_2 amino acid - - - 8.689e-268 837.0
DYD1_k127_3675880_3 helicase superfamily c-terminal domain K11927 - 3.6.4.13 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002939 578.0
DYD1_k127_3675880_4 PFAM blue (type 1) copper domain protein - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004118 488.0
DYD1_k127_3675880_5 PFAM blue (type 1) copper domain protein - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005975 467.0
DYD1_k127_3675880_6 deoxyhypusine monooxygenase activity - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009251 379.0
DYD1_k127_3675880_8 metallopeptidase activity - - - 0.000000000001725 71.0
DYD1_k127_3694293_0 Phosphate acyltransferases K01897,K05939 - 2.3.1.40,6.2.1.20,6.2.1.3 0.0 1573.0
DYD1_k127_3694293_1 alpha-ribazole phosphatase activity K00850,K21071 - 2.7.1.11,2.7.1.90 0.0 1155.0
DYD1_k127_3694293_10 - - - - 0.0000000000000000000000000000000000000000000000000000000000000001593 229.0
DYD1_k127_3694293_11 This protein specifically catalyzes the removal of signal peptides from prolipoproteins K03101 - 3.4.23.36 0.0000000000000000000000000000000000000000000000000000000000000002552 226.0
DYD1_k127_3694293_12 anaphase-promoting complex-dependent catabolic process - - - 0.000000000000000000000000000000000000000000000000000000000001177 213.0
DYD1_k127_3694293_13 - - - - 0.00000000000000000000000000000000000000000000000000001141 192.0
DYD1_k127_3694293_14 Gram-negative-bacterium-type cell outer membrane assembly K04064,K06186 GO:0006950,GO:0006970,GO:0008150,GO:0009628,GO:0050896 - 0.00000000000000000000000000000000000000000000000000004838 190.0
DYD1_k127_3694293_16 Required for dimerization of active 70S ribosomes into 100S ribosomes in stationary phase - - - 0.00000000000000000000000000002944 120.0
DYD1_k127_3694293_17 - - - - 0.0000000000000000001949 93.0
DYD1_k127_3694293_2 Belongs to the pyruvate kinase family K00873 - 2.7.1.40 6.903e-200 635.0
DYD1_k127_3694293_3 amidohydrolase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005898 542.0
DYD1_k127_3694293_4 amino acids such as valine, to avoid such errors it has two additional distinct tRNA(Ile)-dependent editing activities. One activity is designated as 'pretransfer' editing and involves the hydrolysis of activated Val-AMP. The other activity is designated 'posttransfer' editing and involves deacylation of mischarged Val-tRNA(Ile) K01870 - 6.1.1.5 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008655 445.0
DYD1_k127_3694293_5 Catalyzes the dephosphorylation of undecaprenyl diphosphate (UPP) K06153 - 3.6.1.27 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005712 380.0
DYD1_k127_3694293_6 DNA-templated transcription, initiation K03088 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000002058 256.0
DYD1_k127_3694293_7 photosystem II stabilization K02237 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000003773 255.0
DYD1_k127_3694293_8 - - - - 0.00000000000000000000000000000000000000000000000000000000000000000091 246.0
DYD1_k127_3694293_9 - - - - 0.000000000000000000000000000000000000000000000000000000000000000008912 232.0
DYD1_k127_3708657_0 Couples transcription and DNA repair by recognizing RNA polymerase (RNAP) stalled at DNA lesions. Mediates ATP-dependent release of RNAP and its truncated transcript from the DNA, and recruitment of nucleotide excision repair machinery to the damaged site K03723 - - 0.0 1549.0
DYD1_k127_3708657_1 Catalyzes the ADP transfer from ATP to D-glycero-beta-D- manno-heptose 1-phosphate, yielding ADP-D-glycero-beta-D-manno- heptose - - - 0.00000000000000000000000000000000000000000000000000000000000000000002606 235.0
DYD1_k127_3736631_0 transposase activity - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000052 542.0
DYD1_k127_3736631_1 - - - - 0.00000000000000000000000002095 115.0
DYD1_k127_3736631_2 Glycosyl hydrolase family 32 K01193,K03332 - 3.2.1.26,3.2.1.80 0.000000000001247 70.0
DYD1_k127_3736631_3 DDE superfamily endonuclease - - - 0.000000000006809 69.0
DYD1_k127_3755205_0 Penicillin-binding Protein dimerisation domain K03587 - 3.4.16.4 4.014e-260 812.0
DYD1_k127_3755205_1 acid to the nucleotide precursor UDP-N-acetylmuramoyl-L-alanyl-D-glutamate (UMAG) in the biosynthesis of bacterial cell-wall peptidoglycan K01928 - 6.3.2.13 5.472e-210 663.0
DYD1_k127_3755205_2 First step of the lipid cycle reactions in the biosynthesis of the cell wall peptidoglycan K01000 - 2.7.8.13 2.329e-198 624.0
DYD1_k127_3755205_3 Involved in cell wall formation. Catalyzes the final step in the synthesis of UDP-N-acetylmuramoyl-pentapeptide, the precursor of murein K01929 - 6.3.2.10 5.062e-197 624.0
DYD1_k127_3755205_4 Cell wall formation. Catalyzes the addition of glutamate to the nucleotide precursor UDP-N-acetylmuramoyl-L-alanine (UMA) K01925 - 6.3.2.9 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006091 609.0
DYD1_k127_3755205_5 Cell cycle protein K03588 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005157 516.0
DYD1_k127_3755205_6 Cell wall formation. Catalyzes the transfer of a GlcNAc subunit on undecaprenyl-pyrophosphoryl-MurNAc-pentapeptide (lipid intermediate I) to form undecaprenyl-pyrophosphoryl-MurNAc- (pentapeptide)GlcNAc (lipid intermediate II) K02563 - 2.4.1.227 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000171 391.0
DYD1_k127_3755205_7 Specifically methylates the N4 position of cytidine in position 1402 (C1402) of 16S rRNA K03438 GO:0000154,GO:0001510,GO:0003674,GO:0003824,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006139,GO:0006364,GO:0006396,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0008168,GO:0008170,GO:0008173,GO:0008649,GO:0008757,GO:0009451,GO:0009987,GO:0010467,GO:0016070,GO:0016072,GO:0016434,GO:0016740,GO:0016741,GO:0022613,GO:0031167,GO:0032259,GO:0034470,GO:0034641,GO:0034660,GO:0042254,GO:0043170,GO:0043412,GO:0043414,GO:0044085,GO:0044237,GO:0044238,GO:0044260,GO:0044424,GO:0044464,GO:0046483,GO:0070475,GO:0071424,GO:0071704,GO:0071840,GO:0090304,GO:0140098,GO:0140102,GO:1901360 2.1.1.199 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002476 349.0
DYD1_k127_3755205_9 Evidence 5 No homology to any previously reported sequences - - - 0.0000000000000000000000000001981 121.0
DYD1_k127_3798821_0 Response regulator, receiver K20973 - 2.7.13.3 7.627e-216 695.0
DYD1_k127_3798821_1 Tetratricopeptide TPR_2 repeat protein - - - 4.999e-203 704.0
DYD1_k127_3798821_10 response regulator, receiver K03413,K07315 - 3.1.3.3 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000003318 286.0
DYD1_k127_3798821_11 Catalyzes a salvage reaction resulting in the formation of AMP, that is energically less costly than de novo synthesis K00759 - 2.4.2.7 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000002156 279.0
DYD1_k127_3798821_13 4Fe-4S dicluster domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000002189 238.0
DYD1_k127_3798821_14 Prokaryotic dksA/traR C4-type zinc finger K06204 - - 0.000000000000000000000000000000000000000000000000000000000000005937 222.0
DYD1_k127_3798821_15 Peptidase family M48 - - - 0.00000000000000000000000000000000000000000000000000006342 201.0
DYD1_k127_3798821_16 - - - - 0.0000000000000000000000000000000000000000000000000001247 187.0
DYD1_k127_3798821_17 Yqey-like protein K09117 - - 0.0000000000000000000000000000000000000000000000000003788 189.0
DYD1_k127_3798821_18 - - - - 0.0000000000000000000000000000000000000000000000008303 179.0
DYD1_k127_3798821_19 Ferredoxin - - - 0.00000000000000000000000000000000000000000009154 162.0
DYD1_k127_3798821_2 alanine dehydrogenase activity K00259 GO:0000286,GO:0001666,GO:0003674,GO:0003824,GO:0005575,GO:0005576,GO:0005618,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005886,GO:0006082,GO:0006520,GO:0006522,GO:0006524,GO:0006807,GO:0006950,GO:0008150,GO:0008152,GO:0009056,GO:0009063,GO:0009078,GO:0009080,GO:0009628,GO:0009653,GO:0009987,GO:0016020,GO:0016054,GO:0016491,GO:0016638,GO:0019752,GO:0030154,GO:0030312,GO:0030435,GO:0032502,GO:0036293,GO:0043436,GO:0043934,GO:0044237,GO:0044238,GO:0044248,GO:0044281,GO:0044282,GO:0044424,GO:0044444,GO:0044464,GO:0046395,GO:0048646,GO:0048856,GO:0048869,GO:0050896,GO:0055114,GO:0070482,GO:0071704,GO:0071944,GO:1901564,GO:1901565,GO:1901575,GO:1901605,GO:1901606 1.4.1.1 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005876 555.0
DYD1_k127_3798821_20 RNA recognition motif - - - 0.0000000000000000000000000000000000000000003131 161.0
DYD1_k127_3798821_21 Cytochrome c - - - 0.000000000000000000000000000000000000000001264 161.0
DYD1_k127_3798821_22 - K14588 - - 0.00000000000000000000000000000000000000000297 159.0
DYD1_k127_3798821_23 - - - - 0.0000000000000000000000000000000000000008662 153.0
DYD1_k127_3798821_25 Histidine kinase - - - 0.0000000000000000000000002493 108.0
DYD1_k127_3798821_27 Belongs to the acylphosphatase family K01512 GO:0003674,GO:0003824,GO:0003998,GO:0006950,GO:0008150,GO:0009266,GO:0009408,GO:0009628,GO:0016787,GO:0016817,GO:0016818,GO:0050896 3.6.1.7 0.00000000000000000000008126 100.0
DYD1_k127_3798821_29 COG1961 Site-specific recombinases, DNA invertase Pin homologs - - - 0.00000000000000001796 87.0
DYD1_k127_3798821_3 diguanylate cyclase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001427 519.0
DYD1_k127_3798821_32 COG2801 Transposase and inactivated derivatives - - - 0.000004807 51.0
DYD1_k127_3798821_33 - - - - 0.00002192 55.0
DYD1_k127_3798821_34 transcriptional regulator - - - 0.00002741 48.0
DYD1_k127_3798821_35 Phage integrase, N-terminal SAM-like domain - - - 0.00008963 47.0
DYD1_k127_3798821_4 Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released K03086,K03087 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001153 442.0
DYD1_k127_3798821_5 Squalene/phytoene synthase K00801 - 2.5.1.21 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004624 441.0
DYD1_k127_3798821_6 Peptidase family M48 K03799 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000561 429.0
DYD1_k127_3798821_7 transmembrane transport K02532,K05820,K08167,K08218,K08369 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009206 434.0
DYD1_k127_3798821_8 Domain of unknown function (DUF4382) - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001165 329.0
DYD1_k127_3798821_9 Catalyzes the ATP-dependent conversion of 7-carboxy-7- deazaguanine (CDG) to 7-cyano-7-deazaguanine (preQ(0)) K06920 - 6.3.4.20 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000002564 300.0
DYD1_k127_3809467_0 Catalyzes the reduction of ribonucleotides to deoxyribonucleotides. May function to provide a pool of deoxyribonucleotide precursors for DNA repair during oxygen limitation and or for immediate growth after restoration of oxygen K00525 - 1.17.4.1 0.0 2010.0
DYD1_k127_3809467_1 DNA topoisomerase II activity K03167 - 5.99.1.3 5.406e-314 973.0
DYD1_k127_3809467_10 Peptide chain release factor 2 directs the termination of translation in response to the peptide chain termination codons UGA and UAA K02836 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005123 565.0
DYD1_k127_3809467_11 Uncharacterized protein family UPF0004 K18707 - 2.8.4.5 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005745 517.0
DYD1_k127_3809467_12 Catalyzes the transfer of the phosphoribosyl group of 5- phosphorylribose-1-pyrophosphate (PRPP) to anthranilate to yield N-(5'-phosphoribosyl)-anthranilate (PRA) K00766 - 2.4.2.18 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001318 494.0
DYD1_k127_3809467_13 Acetyl-coenzyme A transporter 1 K08218 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000316 465.0
DYD1_k127_3809467_14 long-chain fatty acid transporting porin activity - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007385 416.0
DYD1_k127_3809467_15 - - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003863 413.0
DYD1_k127_3809467_16 FES K03575 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001842 401.0
DYD1_k127_3809467_17 DNA replication proofreading K02336,K06877,K07501 - 2.7.7.7 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003909 377.0
DYD1_k127_3809467_18 Indole-3-glycerol phosphate synthase K01609 - 4.1.1.48 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004437 376.0
DYD1_k127_3809467_19 Part of the twin-arginine translocation (Tat) system that transports large folded proteins containing a characteristic twin-arginine motif in their signal peptide across membranes K03118 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002471 373.0
DYD1_k127_3809467_2 DNA ligase that catalyzes the formation of phosphodiester linkages between 5'-phosphoryl and 3'-hydroxyl groups in double-stranded DNA using NAD as a coenzyme and as the energy source for the reaction. It is essential for DNA replication and repair of damaged DNA K01972 GO:0003674,GO:0003824,GO:0003909,GO:0003911,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006139,GO:0006259,GO:0006266,GO:0006281,GO:0006284,GO:0006288,GO:0006725,GO:0006807,GO:0006950,GO:0006974,GO:0008150,GO:0008152,GO:0009987,GO:0016874,GO:0016886,GO:0033554,GO:0034641,GO:0043170,GO:0044237,GO:0044238,GO:0044260,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0050896,GO:0051103,GO:0051716,GO:0071704,GO:0090304,GO:0140097,GO:1901360 6.5.1.2 2.527e-303 944.0
DYD1_k127_3809467_20 The alpha subunit is responsible for the aldol cleavage of indoleglycerol phosphate to indole and glyceraldehyde 3- phosphate K01695 - 4.2.1.20 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004774 370.0
DYD1_k127_3809467_21 Part of the ABC transporter complex LolCDE involved in the translocation of mature outer membrane-directed lipoproteins, from the inner membrane to the periplasmic chaperone, LolA. Responsible for the formation of the LolA-lipoprotein complex in an ATP-dependent manner K09810 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000158 338.0
DYD1_k127_3809467_22 Peptidase C26 K01658 - 4.1.3.27 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007424 323.0
DYD1_k127_3809467_23 N-(5'phosphoribosyl)anthranilate (PRA) isomerase K01817 - 5.3.1.24 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004399 312.0
DYD1_k127_3809467_24 Lytic transglycosylase with a strong preference for naked glycan strands that lack stem peptides K03642 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000001811 282.0
DYD1_k127_3809467_25 PPIases accelerate the folding of proteins. It catalyzes the cis-trans isomerization of proline imidic peptide bonds in oligopeptides K03767,K03768 - 5.2.1.8 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000003332 275.0
DYD1_k127_3809467_27 GDP-mannose mannosyl hydrolase activity K01515 - 3.6.1.13 0.000000000000000000000000000000000000000000000000000000000000000000000000009638 255.0
DYD1_k127_3809467_28 - - - - 0.00000000000000000000000000000000000000000000000000000000000000000003884 237.0
DYD1_k127_3809467_29 ACT domain - - - 0.000000000000000000000000000000000000000000000000000000000008089 209.0
DYD1_k127_3809467_3 tRNA synthetases class II (D, K and N) K04567 - 6.1.1.6 1.55e-270 837.0
DYD1_k127_3809467_30 nUDIX hydrolase K03574,K03575 - 3.6.1.55 0.0000000000000000000000000000000000000000000000000000002161 197.0
DYD1_k127_3809467_32 Acetyltransferase (GNAT) domain K03789 - 2.3.1.128 0.0000000000000000000000000000000000000000000000002108 183.0
DYD1_k127_3809467_34 LysM domain - - - 0.000000000000000000000000000000000000000008782 161.0
DYD1_k127_3809467_37 Protein of unknown function (DUF465) K09794 - - 0.00000000000000000004951 91.0
DYD1_k127_3809467_39 Glycoprotease family K14742 - - 0.0000002007 55.0
DYD1_k127_3809467_4 Part of a heterotetrameric complex that catalyzes the two-step biosynthesis of anthranilate, an intermediate in the biosynthesis of L-tryptophan. In the first step, the glutamine- binding beta subunit (TrpG) of anthranilate synthase (AS) provides the glutamine amidotransferase activity which generates ammonia as a substrate that, along with chorismate, is used in the second step, catalyzed by the large alpha subunit of AS (TrpE) to produce anthranilate. In the absence of TrpG, TrpE can synthesize anthranilate directly from chorismate and high concentrations of ammonia K01657 - 4.1.3.27 1.504e-257 800.0
DYD1_k127_3809467_41 PFAM Type IV pilus assembly PilZ - - - 0.0009782 49.0
DYD1_k127_3809467_5 The beta subunit is responsible for the synthesis of L- tryptophan from indole and L-serine K01696 - 4.2.1.20 2.177e-220 689.0
DYD1_k127_3809467_6 MacB-like periplasmic core domain K09808 - - 1.146e-203 643.0
DYD1_k127_3809467_7 Carbon-nitrogen hydrolase K03820 - - 9.138e-201 638.0
DYD1_k127_3809467_8 Catalyzes the methylthiolation of N6- (dimethylallyl)adenosine (i(6)A), leading to the formation of 2- methylthio-N6-(dimethylallyl)adenosine (ms(2)i(6)A) at position 37 in tRNAs that read codons beginning with uridine K06168 - 2.8.4.3 2.325e-195 619.0
DYD1_k127_3809467_9 Transporter associated domain K03699 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001021 586.0
DYD1_k127_3838459_0 Pyruvate:ferredoxin oxidoreductase core domain II K00169 - 1.2.7.1 6.917e-234 728.0
DYD1_k127_3838459_1 Belongs to the HesB IscA family K15724 - - 0.000000000000000000000000000000000000000000000000000004437 194.0
DYD1_k127_3865103_0 Type IV pilus assembly protein PilM; K02662 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002732 309.0
DYD1_k127_3865103_1 Prokaryotic N-terminal methylation motif K02672 - - 0.00001427 56.0
DYD1_k127_3865103_2 type IV pilus modification protein PilV K02458,K02671 - - 0.00005363 51.0
DYD1_k127_3928379_0 Type II/IV secretion system protein K02454,K02652 - - 5.991e-302 933.0
DYD1_k127_3928379_1 Type ii and iii secretion system protein K02453 - - 1.661e-206 655.0
DYD1_k127_3928379_2 Type II secretion system (T2SS), protein F K02455,K02653 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000535 554.0
DYD1_k127_3928379_3 Pilus assembly protein K02662 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000001616 285.0
DYD1_k127_3928379_4 general secretion pathway protein K02456 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000001835 262.0
DYD1_k127_3928379_5 Prokaryotic N-terminal methylation motif K02456 - - 0.000000000000000000000000000000000005771 140.0
DYD1_k127_3928379_6 translation initiation factor activity - - - 0.000000000000000000000000000005391 128.0
DYD1_k127_3985863_0 PFAM glycine cleavage T protein (aminomethyl transferase) - - - 8.282e-196 618.0
DYD1_k127_3985863_1 CAAX protease self-immunity K07052 - - 0.0000000000000000000000000000000000000000000000000000001523 207.0
DYD1_k127_3985863_2 Helix-turn-helix domain - - - 0.0000000000000000000000000000000000000000002261 162.0
DYD1_k127_4016503_0 Catalyzes the ATP-dependent conversion of 7-carboxy-7- deazaguanine (CDG) to 7-cyano-7-deazaguanine (preQ(0)) K06920 - 6.3.4.20 0.000000000000000000000000000000000000000000000000000000000000000001936 241.0
DYD1_k127_4016503_1 Evidence 4 Homologs of previously reported genes of - - - 0.000000000000000000000000000000001684 135.0
DYD1_k127_4016503_2 PFAM Rieske 2Fe-2S domain protein K00363,K05710 - 1.7.1.15 0.000000000000000000000001514 106.0
DYD1_k127_4036778_0 COG1924 Activator of 2-hydroxyglutaryl-CoA dehydratase (HSP70-class ATPase domain) - - - 3.561e-309 956.0
DYD1_k127_4036778_1 mismatched DNA binding K03555 - - 1.157e-205 657.0
DYD1_k127_4036778_11 cellulase activity K20276 - - 0.0000000000000000001457 99.0
DYD1_k127_4036778_2 peroxidase activity - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001905 445.0
DYD1_k127_4036778_3 Phosphomethylpyrimidine kinase K00941 - 2.7.1.49,2.7.4.7 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006453 413.0
DYD1_k127_4036778_4 methyltransferase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002735 321.0
DYD1_k127_4036778_5 thiolester hydrolase activity K06889,K07397 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002712 307.0
DYD1_k127_4036778_7 Two component, sigma54 specific, transcriptional regulator, Fis family K02481,K07713 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000001294 314.0
DYD1_k127_4036778_8 MOSC domain - - - 0.000000000000000000000000000000000000000000000000000000000002524 213.0
DYD1_k127_4122387_0 molybdopterin cofactor binding K00370,K10700,K16964,K17050 GO:0005575,GO:0005623,GO:0042597,GO:0044464 1.17.99.2,1.7.5.1,1.8.2.4 0.0 2222.0
DYD1_k127_4122387_1 that it carries out the mismatch recognition step. This protein has a weak ATPase activity K03555 GO:0003674,GO:0003676,GO:0003677,GO:0003684,GO:0003690,GO:0003824,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0006139,GO:0006259,GO:0006281,GO:0006298,GO:0006725,GO:0006807,GO:0006950,GO:0006974,GO:0008094,GO:0008150,GO:0008152,GO:0009987,GO:0016462,GO:0016787,GO:0016817,GO:0016818,GO:0016887,GO:0017111,GO:0030983,GO:0032300,GO:0032991,GO:0033554,GO:0034641,GO:0042623,GO:0043170,GO:0044237,GO:0044238,GO:0044260,GO:0044424,GO:0044464,GO:0046483,GO:0050896,GO:0051716,GO:0071704,GO:0090304,GO:0097159,GO:1901360,GO:1901363,GO:1990391 - 0.0 1120.0
DYD1_k127_4122387_10 polyribonucleotide nucleotidyltransferase activity K00962 GO:0000166,GO:0000175,GO:0003674,GO:0003676,GO:0003723,GO:0003729,GO:0003824,GO:0004518,GO:0004527,GO:0004532,GO:0004540,GO:0004654,GO:0005488,GO:0005515,GO:0005575,GO:0005618,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005886,GO:0006139,GO:0006401,GO:0006402,GO:0006725,GO:0006807,GO:0006950,GO:0008144,GO:0008150,GO:0008152,GO:0008408,GO:0009056,GO:0009057,GO:0009266,GO:0009408,GO:0009628,GO:0009892,GO:0009987,GO:0010468,GO:0010605,GO:0010629,GO:0016020,GO:0016070,GO:0016071,GO:0016740,GO:0016772,GO:0016779,GO:0016787,GO:0016788,GO:0016796,GO:0016896,GO:0017076,GO:0019001,GO:0019222,GO:0019439,GO:0030312,GO:0030551,GO:0032553,GO:0032555,GO:0032561,GO:0034641,GO:0034655,GO:0035438,GO:0036094,GO:0042802,GO:0043167,GO:0043168,GO:0043170,GO:0044237,GO:0044238,GO:0044248,GO:0044260,GO:0044265,GO:0044270,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0046700,GO:0048519,GO:0050789,GO:0050896,GO:0060255,GO:0065007,GO:0071704,GO:0071944,GO:0090304,GO:0090305,GO:0090501,GO:0090503,GO:0097159,GO:0097367,GO:0140098,GO:1901265,GO:1901360,GO:1901361,GO:1901363,GO:1901575 2.7.7.8 1.643e-245 776.0
DYD1_k127_4122387_11 Aminotransferase class I and II K14261 - - 4.268e-237 736.0
DYD1_k127_4122387_12 Uncharacterized ACR, YdiU/UPF0061 family K08997 - - 3.178e-232 729.0
DYD1_k127_4122387_13 Homoserine dehydrogenase K00003 - 1.1.1.3 2.469e-219 686.0
DYD1_k127_4122387_14 Participates in both transcription termination and antitermination K02600 - - 1.841e-213 666.0
DYD1_k127_4122387_15 Bifunctional enzyme that catalyzes the epimerization of the S- and R-forms of NAD(P)HX and the dehydration of the S-form of NAD(P)HX at the expense of ADP, which is converted to AMP. This allows the repair of both epimers of NAD(P)HX, a damaged form of NAD(P)H that is a result of enzymatic or heat-dependent hydration K17758,K17759 - 4.2.1.136,5.1.99.6 2.146e-210 665.0
DYD1_k127_4122387_16 ACT domain K00928 - 2.7.2.4 1.011e-209 661.0
DYD1_k127_4122387_17 peptidyl-tyrosine sulfation - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002804 614.0
DYD1_k127_4122387_18 metallopeptidase activity - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003098 600.0
DYD1_k127_4122387_19 Sulfate transporter family - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000391 603.0
DYD1_k127_4122387_2 One of the essential components for the initiation of protein synthesis. Protects formylmethionyl-tRNA from spontaneous hydrolysis and promotes its binding to the 30S ribosomal subunits. Also involved in the hydrolysis of GTP during the formation of the 70S ribosomal complex K02519 - - 0.0 1068.0
DYD1_k127_4122387_20 Catalyzes the gamma-elimination of phosphate from L- phosphohomoserine and the beta-addition of water to produce L- threonine K01733 - 4.2.3.1 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001382 586.0
DYD1_k127_4122387_21 aminopeptidase activity K01266 - 3.4.11.19 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004207 574.0
DYD1_k127_4122387_22 Insulinase (Peptidase family M16) - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006265 558.0
DYD1_k127_4122387_23 Aminotransferase K10907 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002526 511.0
DYD1_k127_4122387_24 Aminomethyltransferase folate-binding domain K00605 - 2.1.2.10 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001014 482.0
DYD1_k127_4122387_25 Metalloenzyme superfamily K15635 - 5.4.2.12 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001671 477.0
DYD1_k127_4122387_26 FIST C domain - GO:0008150,GO:0040007 - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008871 460.0
DYD1_k127_4122387_27 Enoyl-(Acyl carrier protein) reductase K00208 - 1.3.1.10,1.3.1.9 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001865 425.0
DYD1_k127_4122387_28 Possible lysine decarboxylase K06966 - 3.2.2.10 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001036 404.0
DYD1_k127_4122387_29 Catalyzes the complicated ring closure reaction between the two acyclic compounds 1-deoxy-D-xylulose-5-phosphate (DXP) and 3-amino-2-oxopropyl phosphate (1-amino-acetone-3-phosphate or AAP) to form pyridoxine 5'-phosphate (PNP) and inorganic phosphate K03474 GO:0003674,GO:0003824,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006725,GO:0006766,GO:0006767,GO:0006807,GO:0008150,GO:0008152,GO:0008614,GO:0008615,GO:0009058,GO:0009110,GO:0009987,GO:0016740,GO:0016769,GO:0017144,GO:0018130,GO:0019438,GO:0033856,GO:0034641,GO:0042364,GO:0042816,GO:0042819,GO:0044237,GO:0044249,GO:0044271,GO:0044281,GO:0044283,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0051186,GO:0051188,GO:0071704,GO:0072524,GO:0072525,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576,GO:1901615,GO:1901617 2.6.99.2 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002845 393.0
DYD1_k127_4122387_3 ABC transporter K06020 - 3.6.3.25 0.0 1027.0
DYD1_k127_4122387_30 Nucleotidase that shows phosphatase activity on nucleoside 5'-monophosphates K03787 - 3.1.3.5 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000975 380.0
DYD1_k127_4122387_31 Catalyzes the isomerization between 2-isopropylmalate and 3-isopropylmalate, via the formation of 2-isopropylmaleate K01704 - 4.2.1.33,4.2.1.35 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009005 357.0
DYD1_k127_4122387_32 dTDP-4-dehydrorhamnose reductase activity K00067 - 1.1.1.133 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002337 352.0
DYD1_k127_4122387_33 branched-chain-amino-acid transaminase activity K00824 GO:0003674,GO:0003824,GO:0005488,GO:0006082,GO:0006520,GO:0006807,GO:0008144,GO:0008150,GO:0008152,GO:0008483,GO:0008652,GO:0009056,GO:0009058,GO:0009063,GO:0009987,GO:0016053,GO:0016054,GO:0016740,GO:0016769,GO:0019478,GO:0019752,GO:0019842,GO:0030170,GO:0036094,GO:0043167,GO:0043168,GO:0043436,GO:0044237,GO:0044238,GO:0044248,GO:0044249,GO:0044281,GO:0044282,GO:0044283,GO:0046394,GO:0046395,GO:0046416,GO:0046437,GO:0047810,GO:0048037,GO:0050662,GO:0070279,GO:0071704,GO:0097159,GO:1901363,GO:1901564,GO:1901565,GO:1901566,GO:1901575,GO:1901576,GO:1901605,GO:1901606,GO:1901607 2.6.1.21 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005497 347.0
DYD1_k127_4122387_34 Alpha/beta hydrolase family K06999 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000394 325.0
DYD1_k127_4122387_36 Protein of unknown function (DUF1295) - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003 321.0
DYD1_k127_4122387_37 Responsible for synthesis of pseudouridine from uracil- 55 in the psi GC loop of transfer RNAs K03177 - 5.4.99.25 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006813 317.0
DYD1_k127_4122387_38 peptide-methionine (S)-S-oxide reductase activity K07304,K12267 - 1.8.4.11,1.8.4.12 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000002493 281.0
DYD1_k127_4122387_39 NUDIX domain K01515 - 3.6.1.13 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000003425 280.0
DYD1_k127_4122387_4 Evidence 3 Function proposed based on presence of conserved amino acid motif, structural feature or limited homology K00371,K16965,K17048,K17051 GO:0005575,GO:0005623,GO:0042597,GO:0044464 1.7.5.1 7.356e-299 915.0
DYD1_k127_4122387_41 inositol monophosphate 1-phosphatase activity K01092 - 3.1.3.25 0.0000000000000000000000000000000000000000000000000000000000000000000000000001384 266.0
DYD1_k127_4122387_42 Protein of unknown function (DUF502) - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000005093 257.0
DYD1_k127_4122387_44 peptidyl-tyrosine sulfation - - - 0.00000000000000000000000000000000000000000000000000000000000000000000001649 247.0
DYD1_k127_4122387_45 4Fe-4S dicluster domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000293 242.0
DYD1_k127_4122387_46 regulation of ruffle assembly - - - 0.0000000000000000000000000000000000000000000000000000000000000000000003788 245.0
DYD1_k127_4122387_47 FtsZ-dependent cytokinesis - - - 0.0000000000000000000000000000000000000000000000000000000000000000002028 237.0
DYD1_k127_4122387_48 TIGRFAM succinate dehydrogenase and fumarate reductase iron-sulfur protein K00240 - 1.3.5.1,1.3.5.4 0.00000000000000000000000000000000000000000000000000000000000000001347 226.0
DYD1_k127_4122387_5 Belongs to the alpha-IPM synthase homocitrate synthase family K01649 - 2.3.3.13 6.695e-295 912.0
DYD1_k127_4122387_50 Belongs to the LOG family K06966 - 3.2.2.10 0.0000000000000000000000000000000000000000000000000000000000000001186 226.0
DYD1_k127_4122387_51 Uncharacterized ACR, COG1430 K09005 - - 0.0000000000000000000000000000000000000000000000000000000007391 205.0
DYD1_k127_4122387_52 cellulose synthase K00694 - 2.4.1.12 0.000000000000000000000000000000000000000000000000000000002823 211.0
DYD1_k127_4122387_53 MEKHLA domain - - - 0.00000000000000000000000000000000000000000000000000000003262 199.0
DYD1_k127_4122387_54 acetyltransferase - - - 0.0000000000000000000000000000000000000000000000000000006514 205.0
DYD1_k127_4122387_55 carbonic anhydrase K01674 - 4.2.1.1 0.000000000000000000000000000000000000000000000000000000672 204.0
DYD1_k127_4122387_59 helix_turn_helix, mercury resistance - - - 0.0000000000000000000000000000000000000000000000000006657 185.0
DYD1_k127_4122387_6 radical SAM domain protein K04034 - 1.21.98.3 2.196e-265 826.0
DYD1_k127_4122387_60 RF-1 domain K15034 - - 0.000000000000000000000000000000000000000000000000004392 184.0
DYD1_k127_4122387_61 G/U mismatch-specific uracil-DNA glycosylase activity K01934,K03649 GO:0000700,GO:0003674,GO:0003824,GO:0004844,GO:0006139,GO:0006259,GO:0006281,GO:0006284,GO:0006285,GO:0006725,GO:0006807,GO:0006950,GO:0006974,GO:0008150,GO:0008152,GO:0008263,GO:0009987,GO:0016787,GO:0016798,GO:0016799,GO:0019104,GO:0033554,GO:0034641,GO:0043170,GO:0044237,GO:0044238,GO:0044260,GO:0046483,GO:0050896,GO:0051716,GO:0071704,GO:0090304,GO:0097506,GO:0140097,GO:1901360 3.2.2.28,6.3.3.2 0.000000000000000000000000000000000000000000000000005316 187.0
DYD1_k127_4122387_62 One of several proteins that assist in the late maturation steps of the functional core of the 30S ribosomal subunit. Associates with free 30S ribosomal subunits (but not with 30S subunits that are part of 70S ribosomes or polysomes). Required for efficient processing of 16S rRNA. May interact with the 5'-terminal helix region of 16S rRNA K02834 - - 0.00000000000000000000000000000000000000000000000008989 181.0
DYD1_k127_4122387_63 Evidence 3 Function proposed based on presence of conserved amino acid motif, structural feature or limited homology K00363,K05710 - 1.7.1.15 0.0000000000000000000000000000000000000000000000006257 178.0
DYD1_k127_4122387_64 Required for maturation of 30S ribosomal subunits K09748 GO:0000028,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006412,GO:0006518,GO:0006807,GO:0006996,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0016043,GO:0019538,GO:0022607,GO:0022613,GO:0022618,GO:0034622,GO:0034641,GO:0034645,GO:0042254,GO:0042255,GO:0042274,GO:0043043,GO:0043170,GO:0043603,GO:0043604,GO:0043933,GO:0044085,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044424,GO:0044444,GO:0044464,GO:0065003,GO:0070925,GO:0071704,GO:0071826,GO:0071840,GO:1901564,GO:1901566,GO:1901576 - 0.0000000000000000000000000000000000000000000000008876 179.0
DYD1_k127_4122387_65 bacterial (prokaryotic) histone like domain K04764 - - 0.000000000000000000000000000000000000000000000004828 173.0
DYD1_k127_4122387_66 cellulose synthase K00694 - 2.4.1.12 0.00000000000000000000000000000000000000000000001592 190.0
DYD1_k127_4122387_67 Threonylcarbamoyl adenosine biosynthesis protein TsaE K06925 - - 0.00000000000000000000000000000000000000000004411 168.0
DYD1_k127_4122387_68 Uncharacterized conserved protein (DUF2294) - - - 0.00000000000000000000000000000000000000002353 154.0
DYD1_k127_4122387_69 Transcriptional regulator containing an HTH domain fused to a Zn-ribbon K07743 - - 0.000000000000000000000000000000000000001579 150.0
DYD1_k127_4122387_7 Catalyzes the isomerization between 2-isopropylmalate and 3-isopropylmalate, via the formation of 2-isopropylmaleate K01703 - 4.2.1.33,4.2.1.35 1.178e-260 808.0
DYD1_k127_4122387_70 Forms an intersubunit bridge (bridge B4) with the 23S rRNA of the 50S subunit in the ribosome K02956 GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0015935,GO:0022626,GO:0022627,GO:0032991,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:1990904 - 0.000000000000000000000000000000000000008217 147.0
DYD1_k127_4122387_74 tetraacyldisaccharide 4'-kinase activity K09791 - - 0.00000000000000000000000000000003296 127.0
DYD1_k127_4122387_75 Protein conserved in bacteria K09764 - - 0.00000000000000000000000000000009575 127.0
DYD1_k127_4122387_76 Transglycosylase SLT domain - - - 0.000000000000000000000000000001221 128.0
DYD1_k127_4122387_77 PFAM Calcium calmodulin dependent protein kinase II association-domain protein - - - 0.000000000000000000000000000004207 125.0
DYD1_k127_4122387_8 metallopeptidase activity K03568 - - 1.277e-254 791.0
DYD1_k127_4122387_81 Evidence 2b Function of strongly homologous gene - - - 0.000000000000000000002483 94.0
DYD1_k127_4122387_82 - - - - 0.000000000000001184 81.0
DYD1_k127_4122387_84 - - - - 0.0000000000588 68.0
DYD1_k127_4122387_85 Sulfate transporter - - - 0.000000001775 61.0
DYD1_k127_4122387_87 - - - - 0.00000817 51.0
DYD1_k127_4122387_88 Domain in cystathionine beta-synthase and other proteins. K04767 - - 0.00006371 46.0
DYD1_k127_4122387_9 Beta-Casp domain K07576 - - 9.791e-246 765.0
DYD1_k127_4122387_90 Protein of unknown function (DUF805) - - - 0.0006045 51.0
DYD1_k127_4143947_0 - K06921 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002439 633.0
DYD1_k127_4143947_1 Common central domain of tyrosinase K00505 - 1.14.18.1 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001417 358.0
DYD1_k127_4143947_2 - - - - 0.00000000000000000000000000000000000114 143.0
DYD1_k127_4143947_3 DNA binding domain with preference for A/T rich regions K07491 - - 0.000000000000000000000000003175 115.0
DYD1_k127_4149754_0 PFAM ABC transporter K09691 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000001575 297.0
DYD1_k127_4149754_1 glycosyl transferase group 1 K13668 - 2.4.1.346 0.00000000000000000000000000000000000000000000000000000000000000000008505 246.0
DYD1_k127_4149754_2 Glycosyl transferases group 1 - - - 0.0000000000000000000000000000000000000000000000000000000000000000004332 240.0
DYD1_k127_4149754_3 PFAM Glycosyl transferase, group 1 - - - 0.000000000000000000000000000000000000000000000000000002871 207.0
DYD1_k127_4149754_4 PFAM Glycosyl transferase, group 1 - - - 0.00000000000000000000000000000000000000000000000000007547 201.0
DYD1_k127_4149754_5 Glycosyltransferase like family 2 - - - 0.00000000000000000000000000000000003555 147.0
DYD1_k127_4150627_0 Biotin carboxylase C-terminal domain K01961 - 6.3.4.14,6.4.1.2 4.959e-252 781.0
DYD1_k127_4150627_1 Evidence 3 Function proposed based on presence of conserved amino acid motif, structural feature or limited homology K01524,K07012 - 3.6.1.11,3.6.1.40 2.034e-212 671.0
DYD1_k127_4150627_10 Essential for recycling GMP and indirectly, cGMP K00942 - 2.7.4.8 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007596 314.0
DYD1_k127_4150627_11 oxidoreductase activity - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000008595 302.0
DYD1_k127_4150627_12 DNA repair enzyme that has both DNA N-glycosylase activity and AP-lyase activity. The DNA N-glycosylase activity releases various damaged pyrimidines from DNA by cleaving the N- glycosidic bond, leaving an AP (apurinic apyrimidinic) site. The AP-lyase activity cleaves the phosphodiester bond 3' to the AP site by a beta-elimination, leaving a 3'-terminal unsaturated sugar and a product with a terminal 5'-phosphate K10773 - 4.2.99.18 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000002522 291.0
DYD1_k127_4150627_13 PFAM binding-protein-dependent transport systems inner membrane component K02018 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000003399 285.0
DYD1_k127_4150627_14 dTDP biosynthetic process K00560,K00943,K01585 GO:0000166,GO:0000287,GO:0001882,GO:0001883,GO:0003674,GO:0003824,GO:0004798,GO:0005488,GO:0005515,GO:0005524,GO:0005525,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006139,GO:0006220,GO:0006221,GO:0006227,GO:0006233,GO:0006235,GO:0006725,GO:0006753,GO:0006793,GO:0006796,GO:0006807,GO:0008144,GO:0008150,GO:0008152,GO:0009041,GO:0009058,GO:0009117,GO:0009123,GO:0009129,GO:0009132,GO:0009133,GO:0009138,GO:0009139,GO:0009141,GO:0009142,GO:0009147,GO:0009148,GO:0009161,GO:0009165,GO:0009173,GO:0009186,GO:0009189,GO:0009196,GO:0009197,GO:0009200,GO:0009202,GO:0009211,GO:0009212,GO:0009218,GO:0009219,GO:0009221,GO:0009259,GO:0009262,GO:0009263,GO:0009265,GO:0009394,GO:0009987,GO:0016301,GO:0016310,GO:0016740,GO:0016772,GO:0016776,GO:0017076,GO:0018130,GO:0019001,GO:0019205,GO:0019438,GO:0019637,GO:0019692,GO:0019693,GO:0030554,GO:0032549,GO:0032550,GO:0032553,GO:0032555,GO:0032559,GO:0032561,GO:0034641,GO:0034654,GO:0035639,GO:0036094,GO:0042802,GO:0042803,GO:0043167,GO:0043168,GO:0043169,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0044424,GO:0044464,GO:0046044,GO:0046072,GO:0046075,GO:0046077,GO:0046385,GO:0046483,GO:0046872,GO:0046940,GO:0046983,GO:0050145,GO:0055086,GO:0071704,GO:0072527,GO:0072528,GO:0090407,GO:0097159,GO:0097367,GO:1901135,GO:1901137,GO:1901265,GO:1901293,GO:1901360,GO:1901362,GO:1901363,GO:1901564,GO:1901566,GO:1901576 2.1.1.45,2.7.4.9,4.1.1.19 0.000000000000000000000000000000000000000000000000000000000000000000000000000000002471 278.0
DYD1_k127_4150627_15 Represses a number of genes involved in the response to DNA damage (SOS response) K01356 - 3.4.21.88 0.000000000000000000000000000000000000000000000000000000000000000000000000000005711 264.0
DYD1_k127_4150627_16 Alginate export - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000003853 269.0
DYD1_k127_4150627_17 Phosphorylation of dTMP to form dTDP in both de novo and salvage pathways of dTTP synthesis K00943 - 2.7.4.9 0.00000000000000000000000000000000000000000000000000000000000000002289 233.0
DYD1_k127_4150627_18 first, biotin carboxylase catalyzes the carboxylation of the carrier protein and then the transcarboxylase transfers the carboxyl group to form malonyl-CoA K02160 - - 0.000000000000000000000000000000000000000000000000000000000001034 216.0
DYD1_k127_4150627_19 Catalyzes a trans-dehydration via an enolate intermediate K03786 - 4.2.1.10 0.000000000000000000000000000000000000000000000000000000000561 206.0
DYD1_k127_4150627_2 GTPase that associates with the 50S ribosomal subunit and may have a role during protein synthesis or ribosome biogenesis K03665 - - 2.608e-211 670.0
DYD1_k127_4150627_21 Promotes RNA polymerase assembly. Latches the N- and C- terminal regions of the beta' subunit thereby facilitating its interaction with the beta and alpha subunits K03060 - 2.7.7.6 0.00000000000000000000000000000000000000000039 160.0
DYD1_k127_4150627_22 belongs to the thioredoxin family K14949,K20543 - 2.7.11.1 0.0000000000000000000000000000000000000000004897 167.0
DYD1_k127_4150627_23 40-residue YVTN family beta-propeller repeat - - - 0.000000000000000000000000000000000000007147 162.0
DYD1_k127_4150627_24 DNA integration K14059 - - 0.00000000000001018 81.0
DYD1_k127_4150627_25 - - - - 0.00000000000005748 78.0
DYD1_k127_4150627_26 Can catalyze the hydrolysis of ATP in the presence of single-stranded DNA, the ATP-dependent uptake of single-stranded DNA by duplex DNA, and the ATP-dependent hybridization of homologous single-stranded DNAs. It interacts with LexA causing its activation and leading to its autocatalytic cleavage - - - 0.000000000003035 77.0
DYD1_k127_4150627_27 PFAM blue (type 1) copper domain protein - - - 0.000000001603 70.0
DYD1_k127_4150627_28 Required for the formation of a threonylcarbamoyl group on adenosine at position 37 (t(6)A37) in tRNAs that read codons beginning with adenine. Is involved in the transfer of the threonylcarbamoyl moiety of threonylcarbamoyl-AMP (TC-AMP) to the N6 group of A37, together with TsaE and TsaB. TsaD likely plays a direct catalytic role in this reaction K01409 GO:0000408,GO:0002949,GO:0005575,GO:0005622,GO:0005623,GO:0006139,GO:0006396,GO:0006399,GO:0006400,GO:0006725,GO:0006807,GO:0008033,GO:0008150,GO:0008152,GO:0009451,GO:0009987,GO:0010467,GO:0016070,GO:0032991,GO:0034470,GO:0034641,GO:0034660,GO:0043170,GO:0043412,GO:0044237,GO:0044238,GO:0044424,GO:0044464,GO:0046483,GO:0070525,GO:0071704,GO:0090304,GO:1901360 2.3.1.234 0.0000001449 55.0
DYD1_k127_4150627_29 Transposase IS116 IS110 IS902 family protein K07486 - - 0.0000001673 55.0
DYD1_k127_4150627_3 Catalyzes two steps in the biosynthesis of coenzyme A. In the first step cysteine is conjugated to 4'-phosphopantothenate to form 4-phosphopantothenoylcysteine, in the latter compound is decarboxylated to form 4'-phosphopantotheine K13038 - 4.1.1.36,6.3.2.5 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004466 508.0
DYD1_k127_4150627_30 nuclease - - - 0.00006547 45.0
DYD1_k127_4150627_4 ATPase activity K02017,K02018,K03750,K15497 - 2.10.1.1,3.6.3.29,3.6.3.55 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006063 498.0
DYD1_k127_4150627_5 DNA replication proofreading K02336,K06877 - 2.7.7.7 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003577 469.0
DYD1_k127_4150627_6 PBP superfamily domain K03750,K07219 - 2.10.1.1 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003444 352.0
DYD1_k127_4150627_7 Domain of unknown function (DUF1732) - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001128 341.0
DYD1_k127_4150627_8 Bacterial extracellular solute-binding protein K02020 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001924 329.0
DYD1_k127_4150627_9 Involved in peptide bond synthesis. Stimulates efficient translation and peptide-bond synthesis on native or reconstituted 70S ribosomes in vitro. Probably functions indirectly by altering the affinity of the ribosome for aminoacyl-tRNA, thus increasing their reactivity as acceptors for peptidyl transferase K02356 GO:0003674,GO:0003676,GO:0003723,GO:0003746,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006412,GO:0006414,GO:0006518,GO:0006807,GO:0008135,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0019538,GO:0034641,GO:0034645,GO:0043043,GO:0043170,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044424,GO:0044464,GO:0071704,GO:0097159,GO:1901363,GO:1901564,GO:1901566,GO:1901576 - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003773 314.0
DYD1_k127_4163677_0 Releases the supercoiling and torsional tension of DNA, which is introduced during the DNA replication and transcription, by transiently cleaving and rejoining one strand of the DNA duplex. Introduces a single-strand break via transesterification at a target site in duplex DNA. The scissile phosphodiester is attacked by the catalytic tyrosine of the enzyme, resulting in the formation of a DNA-(5'-phosphotyrosyl)-enzyme intermediate and the expulsion of a 3'-OH DNA strand. The free DNA strand then undergoes passage around the unbroken strand, thus removing DNA supercoils. Finally, in the religation step, the DNA 3'-OH attacks the covalent intermediate to expel the active-site tyrosine and restore the DNA phosphodiester backbone K03168 - 5.99.1.2 0.0 1313.0
DYD1_k127_4163677_1 DNA recombination-mediator protein A K04096 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000631 271.0
DYD1_k127_4163677_2 ferroxidase activity K03594 GO:0003674,GO:0003824,GO:0004322,GO:0005575,GO:0005576,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005886,GO:0006873,GO:0006875,GO:0006879,GO:0008150,GO:0008152,GO:0009987,GO:0010035,GO:0010038,GO:0010039,GO:0016020,GO:0016491,GO:0016722,GO:0016724,GO:0019725,GO:0030003,GO:0033212,GO:0033214,GO:0042221,GO:0042592,GO:0044424,GO:0044444,GO:0044464,GO:0046916,GO:0048878,GO:0050801,GO:0050896,GO:0055065,GO:0055072,GO:0055076,GO:0055080,GO:0055082,GO:0055114,GO:0065007,GO:0065008,GO:0071944,GO:0098771 1.16.3.1 0.00000000000000000000000000000000000000000000000000000000000000000000000001136 253.0
DYD1_k127_4163677_3 once thought to export heme, this seems not to be the case, but its exact role is uncertain. Responsible for energy coupling to the transport system K02193 - 3.6.3.41 0.000000000000000000000000000000000000000000000000000000000004942 215.0
DYD1_k127_4163677_4 - - - - 0.00000000000000000000000000000000003377 143.0
DYD1_k127_4163677_5 Required for the export of heme to the periplasm for the biogenesis of c-type cytochromes K02194 - - 0.000000000000000007071 87.0
DYD1_k127_4191895_0 Papain family cysteine protease - - - 0.00000000000000000000000000000000000000000000000000002132 194.0
DYD1_k127_4222268_0 Required for chromosome condensation and partitioning K03529 - - 0.0 1265.0
DYD1_k127_4222268_1 Catalyzes the conversion of 1-hydroxy-2-methyl-2-(E)- butenyl 4-diphosphate (HMBPP) into a mixture of isopentenyl diphosphate (IPP) and dimethylallyl diphosphate (DMAPP). Acts in the terminal step of the DOXP MEP pathway for isoprenoid precursor biosynthesis K03527 - 1.17.7.4 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000752 564.0
DYD1_k127_4222268_2 Transcriptional regulatory protein, C terminal K07658 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002154 372.0
DYD1_k127_4222268_3 His Kinase A (phosphoacceptor) domain K02484,K07636,K07768 - 2.7.13.3 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002409 389.0
DYD1_k127_4222268_4 Catalyzes the condensation reaction of fatty acid synthesis by the addition to an acyl acceptor of two carbons from malonyl-ACP. Catalyzes the first condensation reaction which initiates fatty acid synthesis and may therefore play a role in governing the total rate of fatty acid production. Possesses both acetoacetyl-ACP synthase and acetyl transacylase activities. Its substrate specificity determines the biosynthesis of branched- chain and or straight-chain of fatty acids K00648 - 2.3.1.180 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000001677 284.0
DYD1_k127_4231746_0 Multicopper oxidase K00368,K07233,K22349 - 1.16.3.3,1.7.2.1 0.0 3058.0
DYD1_k127_4231746_1 aldehyde-lyase activity K01621 - 4.1.2.22,4.1.2.9 0.0 1382.0
DYD1_k127_4231746_10 ABC-2 family transporter protein K01992 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003136 531.0
DYD1_k127_4231746_11 ABC-2 family transporter protein K01992 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000842 509.0
DYD1_k127_4231746_12 Catalyzes the formation of acetyl phosphate from acetate and ATP. Can also catalyze the reverse reaction K00925 - 2.7.2.1 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009859 499.0
DYD1_k127_4231746_13 HlyD family secretion protein K01993 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002508 460.0
DYD1_k127_4231746_14 ABC-type transport system involved in resistance to organic solvents, permease component K02066 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002767 461.0
DYD1_k127_4231746_15 efflux transmembrane transporter activity - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000276 467.0
DYD1_k127_4231746_16 Polymer-forming cytoskeletal - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001393 393.0
DYD1_k127_4231746_17 PFAM blue (type 1) copper domain protein - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003237 379.0
DYD1_k127_4231746_18 two component, sigma54 specific, transcriptional regulator, Fis family K02481,K07713 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001706 315.0
DYD1_k127_4231746_19 Protein of unknown function (DUF1207) - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000003203 289.0
DYD1_k127_4231746_2 ATPase activity K01990 - - 1.35e-286 893.0
DYD1_k127_4231746_20 Glutathione-dependent formaldehyde-activating enzyme - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000002213 258.0
DYD1_k127_4231746_21 phosphorelay signal transduction system - - - 0.000000000000000000000000000000000000000003742 158.0
DYD1_k127_4231746_22 - - - - 0.00000000000000000000000000000000000005115 149.0
DYD1_k127_4231746_23 Acetyltransferase (GNAT) domain - - - 0.0000000000000000000000000000000007321 136.0
DYD1_k127_4231746_24 integral membrane protein - - - 0.000000000000000000000000000000002095 136.0
DYD1_k127_4231746_25 Bacterial regulatory proteins, tetR family - - - 0.00000000000000000000000000000003436 132.0
DYD1_k127_4231746_27 Evidence 3 Function proposed based on presence of conserved amino acid motif, structural feature or limited homology - - - 0.000000000000000000007624 93.0
DYD1_k127_4231746_3 Acts as a processive, ATP-dependent zinc metallopeptidase for both cytoplasmic and membrane proteins. Plays a role in the quality control of integral membrane proteins K03798,K04076,K13525,K17681 - 3.4.21.53 9.165e-276 859.0
DYD1_k127_4231746_4 Sigma-54 interaction domain K07714 - - 1.633e-252 784.0
DYD1_k127_4231746_5 Carbohydrate phosphorylase K00688 - 2.4.1.1 1.539e-246 773.0
DYD1_k127_4231746_6 protein secretion by the type I secretion system K02021 - - 8.157e-223 706.0
DYD1_k127_4231746_7 Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family - - - 5.165e-214 673.0
DYD1_k127_4231746_8 amine dehydrogenase activity K01406 - 3.4.24.40 3.306e-202 636.0
DYD1_k127_4231746_9 His Kinase A (phosphoacceptor) domain - - - 3.732e-194 632.0
DYD1_k127_4239078_0 - - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001214 462.0
DYD1_k127_4239078_1 - - - - 0.0000000000000000000000000000000000000000000000000000000001094 217.0
DYD1_k127_4239078_2 nuclease activity K06218 - - 0.000000000000000006324 86.0
DYD1_k127_4239078_3 - - - - 0.00000000001053 73.0
DYD1_k127_4239078_5 Belongs to the 'phage' integrase family - - - 0.0000002424 55.0
DYD1_k127_4239078_6 Belongs to the UPF0758 family K03630 - - 0.000001426 51.0
DYD1_k127_4239078_7 Histidine kinase - - - 0.0003307 53.0
DYD1_k127_4259554_0 Protein involved in outer membrane biogenesis - - - 8.823e-200 659.0
DYD1_k127_4259554_1 Part of the MsrPQ system that repairs oxidized periplasmic proteins containing methionine sulfoxide residues (Met-O), using respiratory chain electrons. Thus protects these proteins from oxidative-stress damage caused by reactive species of oxygen and chlorine generated by the host defense mechanisms. MsrPQ is essential for the maintenance of envelope integrity under bleach stress, rescuing a wide series of structurally unrelated periplasmic proteins from methionine oxidation. The catalytic subunit MsrP is non-stereospecific, being able to reduce both (R-) and (S-) diastereoisomers of methionine sulfoxide K00387 - 1.8.3.1 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001583 555.0
DYD1_k127_4259554_2 Evidence 3 Function proposed based on presence of conserved amino acid motif, structural feature or limited homology K07285 - - 0.0000000000000000000000000000000000000000000000016 179.0
DYD1_k127_4259554_3 MafB19-like deaminase - - - 0.0000000000000000000000000000000000000000000000217 175.0
DYD1_k127_4259554_4 protein homooligomerization - - - 0.000000000000000000000000007853 122.0
DYD1_k127_4259554_5 Antibiotic biosynthesis monooxygenase - - - 0.000000000000000000000074 102.0
DYD1_k127_4259554_6 - - - - 0.0000000000000001297 81.0
DYD1_k127_4259554_7 Pfam:DUF2029 - - - 0.00000000000001751 86.0
DYD1_k127_4259554_8 - - - - 0.0000000002337 62.0
DYD1_k127_4270491_0 Pterin binding enzyme K00548,K15023 - 2.1.1.13,2.1.1.258 0.0 1916.0
DYD1_k127_4270491_1 dead DEAH box helicase K03727 GO:0003674,GO:0003724,GO:0003824,GO:0004004,GO:0004386,GO:0005575,GO:0005618,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005886,GO:0006139,GO:0006401,GO:0006725,GO:0006807,GO:0008026,GO:0008150,GO:0008152,GO:0008186,GO:0009056,GO:0009057,GO:0009987,GO:0016020,GO:0016070,GO:0016462,GO:0016787,GO:0016817,GO:0016818,GO:0016887,GO:0017111,GO:0019439,GO:0030312,GO:0034641,GO:0034655,GO:0042623,GO:0043170,GO:0044237,GO:0044238,GO:0044248,GO:0044260,GO:0044265,GO:0044270,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0046700,GO:0070035,GO:0071704,GO:0071944,GO:0090304,GO:0140098,GO:1901360,GO:1901361,GO:1901575 - 9.004e-287 891.0
DYD1_k127_4270491_10 COG3706 Response regulator containing a CheY-like receiver domain and a GGDEF domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001006 486.0
DYD1_k127_4270491_11 ThiF family K21029 - 2.7.7.80 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004474 468.0
DYD1_k127_4270491_12 Phosphorolytic exoribonuclease that removes nucleotide residues following the -CCA terminus of tRNA and adds nucleotides to the ends of RNA molecules by using nucleoside diphosphates as substrates K00989 GO:0006139,GO:0006401,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0009056,GO:0009057,GO:0009987,GO:0016070,GO:0016072,GO:0016075,GO:0019439,GO:0034641,GO:0034655,GO:0034660,GO:0034661,GO:0043170,GO:0044237,GO:0044238,GO:0044248,GO:0044260,GO:0044265,GO:0044270,GO:0046483,GO:0046700,GO:0071704,GO:0090304,GO:1901360,GO:1901361,GO:1901575 2.7.7.56 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002504 401.0
DYD1_k127_4270491_13 Elongator protein 3, MiaB family, Radical SAM - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002136 389.0
DYD1_k127_4270491_14 deoxyhypusine monooxygenase activity - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003071 342.0
DYD1_k127_4270491_15 Ring cyclization and eight-electron oxidation of 3a-(2- amino-2-carboxyethyl)-4,5-dioxo-4,5,6,7,8,9-hexahydroquinoline- 7,9-dicarboxylic-acid to PQQ K06137 - 1.3.3.11 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001543 319.0
DYD1_k127_4270491_16 - - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007888 319.0
DYD1_k127_4270491_17 Converts alpha-N-acetylneuranimic acid (Neu5Ac) to the beta-anomer, accelerating the equilibrium between the alpha- and beta-anomers. Probably facilitates sialidase-negative bacteria to compete sucessfully for limited amounts of extracellular Neu5Ac, which is likely taken up in the beta-anomer. In addition, the rapid removal of sialic acid from solution might be advantageous to the bacterium to damp down host responses - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001613 312.0
DYD1_k127_4270491_18 TPM domain K06872 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003027 311.0
DYD1_k127_4270491_19 Removes the formyl group from the N-terminal Met of newly synthesized proteins. Requires at least a dipeptide for an efficient rate of reaction. N-terminal L-methionine is a prerequisite for activity but the enzyme has broad specificity at other positions K01462 - 3.5.1.88 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000006943 278.0
DYD1_k127_4270491_2 Evidence 2a Function of homologous gene experimentally demonstrated in an other organism K06147,K11085 - - 2.628e-259 810.0
DYD1_k127_4270491_20 nucleotidyltransferase activity K00984,K19279 - 2.7.7.47 0.0000000000000000000000000000000000000000000000000000000000000000000000000000004468 272.0
DYD1_k127_4270491_21 Lipopolysaccharide biosynthesis protein - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000004856 272.0
DYD1_k127_4270491_22 JAB/MPN domain K21140 - 3.13.1.6 0.00000000000000000000000000000000000000000000000000000000000000000000000001377 255.0
DYD1_k127_4270491_23 Pyrophosphatase that catalyzes the hydrolysis of nucleoside triphosphates to their monophosphate derivatives, with a high preference for the non-canonical purine nucleotides XTP (xanthosine triphosphate), dITP (deoxyinosine triphosphate) and ITP. Seems to function as a house-cleaning enzyme that removes non-canonical purine nucleotides from the nucleotide pool, thus preventing their incorporation into DNA RNA and avoiding chromosomal lesions K02428 GO:0003674,GO:0003824,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006139,GO:0006725,GO:0006753,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0009056,GO:0009058,GO:0009141,GO:0009143,GO:0009987,GO:0016462,GO:0016787,GO:0016817,GO:0016818,GO:0018130,GO:0019438,GO:0019439,GO:0019637,GO:0034404,GO:0034641,GO:0034654,GO:0034655,GO:0044237,GO:0044238,GO:0044248,GO:0044249,GO:0044270,GO:0044271,GO:0044281,GO:0044283,GO:0044424,GO:0044444,GO:0044464,GO:0046434,GO:0046483,GO:0046700,GO:0047429,GO:0055086,GO:0071704,GO:1901292,GO:1901360,GO:1901361,GO:1901362,GO:1901575,GO:1901576 3.6.1.66 0.0000000000000000000000000000000000000000000000000000000000000000000000005497 251.0
DYD1_k127_4270491_24 CHASE3 domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000005451 257.0
DYD1_k127_4270491_25 Domain of unknown function (DUF5069) - - - 0.0000000000000000000000000000000000000000000000000000000000000008429 226.0
DYD1_k127_4270491_26 PLD-like domain - - - 0.0000000000000000000000000000000000000000000000000000000000009674 214.0
DYD1_k127_4270491_29 Response regulator, receiver - - - 0.00000000000000000000000000000000000000000000000000000006493 202.0
DYD1_k127_4270491_3 Pyridoxal-phosphate dependent enzyme K01733 - 4.2.3.1 2.848e-247 766.0
DYD1_k127_4270491_32 PFAM Formylglycine-generating sulfatase enzyme - - - 0.00000000000000000000000000000000000000000000002531 183.0
DYD1_k127_4270491_33 - - - - 0.0000000000000000000000000000000000000000003745 160.0
DYD1_k127_4270491_34 ThiS family K03636 - - 0.0000000000000000000000000000000000000005067 149.0
DYD1_k127_4270491_36 NIL - - - 0.000000000000000000000000000000000001086 139.0
DYD1_k127_4270491_37 Involved in the modulation of the specificity of the ClpAP-mediated ATP-dependent protein degradation K06891 GO:0003674,GO:0005488,GO:0005515,GO:0006950,GO:0008150,GO:0009266,GO:0009408,GO:0009628,GO:0050896,GO:0051087 - 0.0000000000000000000000000000001185 126.0
DYD1_k127_4270491_4 Catalyzes the synthesis of ADP-glucose, a sugar donor used in elongation reactions on alpha-glucans K00975 - 2.7.7.27 3.479e-223 702.0
DYD1_k127_4270491_40 thiamine diphosphate biosynthetic process K03154 - - 0.000000000000000000000000008898 110.0
DYD1_k127_4270491_41 Regulatory protein, FmdB family - - - 0.00000000000000000000000002872 109.0
DYD1_k127_4270491_5 response regulator K07814 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002281 600.0
DYD1_k127_4270491_51 PFAM Ammonia monooxygenase particulate methane monooxygenase, subunit C K10946 - - 0.00000001646 58.0
DYD1_k127_4270491_6 FAD binding domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001009 579.0
DYD1_k127_4270491_7 Pyridoxal-phosphate dependent enzyme K01738,K12339 - 2.5.1.47 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000197 541.0
DYD1_k127_4270491_8 dead DEAH box helicase K03727 GO:0003674,GO:0003724,GO:0003824,GO:0004004,GO:0004386,GO:0005575,GO:0005618,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005886,GO:0006139,GO:0006401,GO:0006725,GO:0006807,GO:0008026,GO:0008150,GO:0008152,GO:0008186,GO:0009056,GO:0009057,GO:0009987,GO:0016020,GO:0016070,GO:0016462,GO:0016787,GO:0016817,GO:0016818,GO:0016887,GO:0017111,GO:0019439,GO:0030312,GO:0034641,GO:0034655,GO:0042623,GO:0043170,GO:0044237,GO:0044238,GO:0044248,GO:0044260,GO:0044265,GO:0044270,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0046700,GO:0070035,GO:0071704,GO:0071944,GO:0090304,GO:0140098,GO:1901360,GO:1901361,GO:1901575 - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003818 512.0
DYD1_k127_4270491_9 ThiF family K21029 - 2.7.7.80 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007675 480.0
DYD1_k127_427466_0 cellulase activity - - - 0.000000000000000000000000000000000000000000000000000001402 220.0
DYD1_k127_427466_1 regulation of circadian rhythm K06919 - - 0.0000000000000000000000000000000000000001254 166.0
DYD1_k127_427466_2 Collagen, type IV, alpha 1 K06237 GO:0001101,GO:0001525,GO:0001568,GO:0001569,GO:0001654,GO:0001655,GO:0001763,GO:0001944,GO:0002009,GO:0002119,GO:0002164,GO:0002791,GO:0002793,GO:0003674,GO:0005198,GO:0005201,GO:0005488,GO:0005515,GO:0005575,GO:0005576,GO:0005581,GO:0005587,GO:0005604,GO:0005622,GO:0005623,GO:0005737,GO:0005783,GO:0005788,GO:0007154,GO:0007165,GO:0007166,GO:0007167,GO:0007169,GO:0007275,GO:0007399,GO:0007417,GO:0007420,GO:0007423,GO:0007442,GO:0007443,GO:0007517,GO:0007519,GO:0007528,GO:0008150,GO:0009653,GO:0009719,GO:0009790,GO:0009791,GO:0009792,GO:0009888,GO:0009987,GO:0010033,GO:0010243,GO:0010720,GO:0010975,GO:0010976,GO:0012505,GO:0014706,GO:0016043,GO:0019838,GO:0022008,GO:0023052,GO:0030023,GO:0030154,GO:0030198,GO:0031012,GO:0031344,GO:0031346,GO:0031974,GO:0032101,GO:0032103,GO:0032501,GO:0032502,GO:0032879,GO:0032880,GO:0032991,GO:0035239,GO:0035295,GO:0038063,GO:0038065,GO:0042221,GO:0043010,GO:0043062,GO:0043200,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0043233,GO:0044420,GO:0044421,GO:0044422,GO:0044424,GO:0044432,GO:0044444,GO:0044446,GO:0044464,GO:0045595,GO:0045597,GO:0045664,GO:0045666,GO:0048407,GO:0048513,GO:0048514,GO:0048518,GO:0048522,GO:0048546,GO:0048565,GO:0048583,GO:0048584,GO:0048598,GO:0048619,GO:0048646,GO:0048679,GO:0048680,GO:0048699,GO:0048729,GO:0048731,GO:0048754,GO:0048856,GO:0048869,GO:0050708,GO:0050714,GO:0050767,GO:0050769,GO:0050789,GO:0050793,GO:0050794,GO:0050808,GO:0050896,GO:0051046,GO:0051047,GO:0051049,GO:0051050,GO:0051094,GO:0051128,GO:0051130,GO:0051222,GO:0051223,GO:0051239,GO:0051240,GO:0051716,GO:0051960,GO:0051962,GO:0055123,GO:0060041,GO:0060284,GO:0060322,GO:0060429,GO:0060537,GO:0060538,GO:0060562,GO:0061061,GO:0061138,GO:0061298,GO:0061299,GO:0061304,GO:0061326,GO:0061327,GO:0061333,GO:0061525,GO:0062023,GO:0065007,GO:0070013,GO:0070201,GO:0070570,GO:0070572,GO:0070887,GO:0071229,GO:0071230,GO:0071310,GO:0071417,GO:0071495,GO:0071711,GO:0071840,GO:0072001,GO:0072002,GO:0072358,GO:0072359,GO:0080134,GO:0080135,GO:0090087,GO:0097493,GO:0098642,GO:0098644,GO:0098645,GO:0098651,GO:0099080,GO:0099081,GO:0120035,GO:1901698,GO:1901699,GO:1901700,GO:1901701,GO:1903034,GO:1903036,GO:1903530,GO:1903532,GO:1904951,GO:2000026 - 0.0003041 53.0
DYD1_k127_427466_3 PFAM PIF1 helicase K01144 - 3.1.11.5 0.0005003 45.0
DYD1_k127_4317877_0 Catalyzes the attachment of threonine to tRNA(Thr) in a two-step reaction L-threonine is first activated by ATP to form Thr-AMP and then transferred to the acceptor end of tRNA(Thr) K01868 - 6.1.1.3 0.0 1050.0
DYD1_k127_4317877_1 B3/4 domain K01890 - 6.1.1.20 2.012e-255 798.0
DYD1_k127_4317877_10 sequence-specific DNA binding K03557,K07712 GO:0000018,GO:0000229,GO:0000785,GO:0000786,GO:0000787,GO:0000789,GO:0000976,GO:0000984,GO:0000985,GO:0001017,GO:0001046,GO:0001047,GO:0001067,GO:0001121,GO:0001130,GO:0001131,GO:0001140,GO:0001216,GO:0001217,GO:0003674,GO:0003676,GO:0003677,GO:0003690,GO:0003700,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005694,GO:0005737,GO:0005829,GO:0006139,GO:0006351,GO:0006355,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0008301,GO:0009058,GO:0009059,GO:0009314,GO:0009628,GO:0009889,GO:0009890,GO:0009891,GO:0009892,GO:0009893,GO:0009987,GO:0010467,GO:0010468,GO:0010556,GO:0010557,GO:0010558,GO:0010604,GO:0010605,GO:0010628,GO:0010629,GO:0016032,GO:0016070,GO:0018130,GO:0019042,GO:0019045,GO:0019046,GO:0019219,GO:0019222,GO:0019438,GO:0031323,GO:0031324,GO:0031325,GO:0031326,GO:0031327,GO:0031328,GO:0031421,GO:0032359,GO:0032774,GO:0032991,GO:0032993,GO:0034641,GO:0034645,GO:0034654,GO:0042802,GO:0042803,GO:0043170,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043565,GO:0044212,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044271,GO:0044374,GO:0044403,GO:0044419,GO:0044422,GO:0044424,GO:0044427,GO:0044444,GO:0044446,GO:0044464,GO:0044815,GO:0045892,GO:0045893,GO:0045911,GO:0045934,GO:0045935,GO:0046483,GO:0046983,GO:0048518,GO:0048519,GO:0048522,GO:0048523,GO:0050789,GO:0050794,GO:0050896,GO:0051052,GO:0051054,GO:0051171,GO:0051172,GO:0051173,GO:0051252,GO:0051253,GO:0051254,GO:0051704,GO:0060255,GO:0065007,GO:0071704,GO:0080090,GO:0090304,GO:0097159,GO:0097659,GO:0140110,GO:1901360,GO:1901362,GO:1901363,GO:1901576,GO:1902679,GO:1902680,GO:1903506,GO:1903507,GO:1903508,GO:1990837,GO:2000112,GO:2000113,GO:2001141 - 0.00000000000000000000000000000000000000000000000000174 189.0
DYD1_k127_4317877_11 2 iron, 2 sulfur cluster binding K04487,K13643 - 2.8.1.7 0.0000000000000000000000000000000000000001959 154.0
DYD1_k127_4317877_12 Histone-like DNA-binding protein which is capable of wrapping DNA to stabilize it, and thus to prevent its denaturation under extreme environmental conditions K03530 - - 0.00000000000000000000000000000000000003854 145.0
DYD1_k127_4317877_13 PFAM response regulator receiver - - - 0.000000000000000000000003018 111.0
DYD1_k127_4317877_15 phosphorelay signal transduction system - - - 0.00000000000000000004591 95.0
DYD1_k127_4317877_17 Belongs to the bacterial ribosomal protein bL35 family K02916 GO:0003674,GO:0003735,GO:0005198,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0015934,GO:0022625,GO:0022626,GO:0032991,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:1990904 - 0.00000000000002261 74.0
DYD1_k127_4317877_18 Staphylococcal nuclease homologues K01174 - 3.1.31.1 0.0007204 44.0
DYD1_k127_4317877_2 Belongs to the class-II aminoacyl-tRNA synthetase family. Phe-tRNA synthetase alpha subunit type K01889 - 6.1.1.20 2.691e-251 785.0
DYD1_k127_4317877_3 16S rRNA methyltransferase RsmB/F K03500 - 2.1.1.176 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001974 464.0
DYD1_k127_4317877_4 Attaches a formyl group to the free amino group of methionyl-tRNA(fMet). The formyl group appears to play a dual role in the initiator identity of N-formylmethionyl-tRNA by promoting its recognition by IF2 and preventing the misappropriation of this tRNA by the elongation apparatus K00604 GO:0003674,GO:0003824,GO:0004479,GO:0006139,GO:0006396,GO:0006399,GO:0006400,GO:0006412,GO:0006413,GO:0006464,GO:0006518,GO:0006725,GO:0006807,GO:0008033,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009451,GO:0009987,GO:0010467,GO:0016070,GO:0016740,GO:0016741,GO:0016742,GO:0019538,GO:0019988,GO:0034470,GO:0034641,GO:0034645,GO:0034660,GO:0036211,GO:0043043,GO:0043170,GO:0043412,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0046483,GO:0071704,GO:0071951,GO:0090304,GO:0140098,GO:0140101,GO:1901360,GO:1901564,GO:1901566,GO:1901576 2.1.2.9 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004337 436.0
DYD1_k127_4317877_5 Ribulose-phosphate 3 epimerase family K01783 - 5.1.3.1 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001247 318.0
DYD1_k127_4317877_6 Nitrite and sulphite reductase 4Fe-4S domain K00362,K00392 - 1.7.1.15,1.8.7.1 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000241 296.0
DYD1_k127_4317877_7 Translation initiation factor IF-3, C-terminal domain K02520 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000295 297.0
DYD1_k127_4317877_8 Binds directly to 23S ribosomal RNA and is necessary for the in vitro assembly process of the 50S ribosomal subunit. It is not involved in the protein synthesizing functions of that subunit K02887 GO:0000027,GO:0003674,GO:0003735,GO:0005198,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0006996,GO:0008150,GO:0009987,GO:0015934,GO:0016043,GO:0022607,GO:0022613,GO:0022618,GO:0022625,GO:0022626,GO:0032991,GO:0034622,GO:0042254,GO:0042255,GO:0042273,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043933,GO:0044085,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:0065003,GO:0070925,GO:0071826,GO:0071840,GO:1990904 - 0.000000000000000000000000000000000000000000000000000000009235 199.0
DYD1_k127_4317877_9 COG2204 Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains K07713 GO:0000156,GO:0000160,GO:0003674,GO:0003676,GO:0003677,GO:0005488,GO:0006139,GO:0006351,GO:0006725,GO:0006807,GO:0007154,GO:0007165,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0016070,GO:0018130,GO:0019438,GO:0023052,GO:0032774,GO:0034641,GO:0034645,GO:0034654,GO:0035556,GO:0043170,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044271,GO:0046483,GO:0050789,GO:0050794,GO:0050896,GO:0051716,GO:0060089,GO:0065007,GO:0071704,GO:0090304,GO:0097159,GO:0097659,GO:1901360,GO:1901362,GO:1901363,GO:1901576 - 0.00000000000000000000000000000000000000000000000000003528 194.0
DYD1_k127_443554_0 The UvrABC repair system catalyzes the recognition and processing of DNA lesions. UvrA is an ATPase and a DNA-binding protein. A damage recognition complex composed of 2 UvrA and 2 UvrB subunits scans DNA for abnormalities. When the presence of a lesion has been verified by UvrB, the UvrA molecules dissociate K03701 - - 0.0 1412.0
DYD1_k127_443554_1 ATP-dependent serine protease that mediates the selective degradation of mutant and abnormal proteins as well as certain short-lived regulatory proteins. Required for cellular homeostasis and for survival from DNA damage and developmental changes induced by stress. Degrades polypeptides processively to yield small peptide fragments that are 5 to 10 amino acids long. Binds to DNA in a double-stranded, site-specific manner K01338 - 3.4.21.53 0.0 1333.0
DYD1_k127_443554_10 denitrification pathway - - - 1.386e-225 704.0
DYD1_k127_443554_11 tail specific protease K03797 - 3.4.21.102 4.274e-212 667.0
DYD1_k127_443554_12 aminopeptidase activity - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004845 563.0
DYD1_k127_443554_13 tRNA 3'-trailer cleavage K00784 - 3.1.26.11 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002328 548.0
DYD1_k127_443554_14 Histone deacetylase domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003442 524.0
DYD1_k127_443554_15 Nucleotidyl transferase K00963 - 2.7.7.9 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001936 487.0
DYD1_k127_443554_16 thiosulfate sulfurtransferase activity K01011,K21028 - 2.8.1.1,2.8.1.11,2.8.1.2 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003945 481.0
DYD1_k127_443554_17 Catalyzes the rearrangement of 1-deoxy-D-xylulose 5- phosphate (DXP) to produce the thiazole phosphate moiety of thiamine. Sulfur is provided by the thiocarboxylate moiety of the carrier protein ThiS. In vitro, sulfur can be provided by H(2)S K03149 - 2.8.1.10 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001093 469.0
DYD1_k127_443554_18 Peptidase family M23 K21471 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005005 456.0
DYD1_k127_443554_19 Carbon-nitrogen hydrolase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005347 410.0
DYD1_k127_443554_2 damaged site, the DNA wraps around one UvrB monomer. DNA wrap is dependent on ATP binding by UvrB and probably causes local melting of the DNA helix, facilitating insertion of UvrB beta-hairpin between the DNA strands. Then UvrB probes one DNA strand for the presence of a lesion. If a lesion is found the UvrA subunits dissociate and the UvrB-DNA preincision complex is formed. This complex is subsequently bound by UvrC and the second UvrB is released. If no lesion is found, the DNA wraps around the other UvrB subunit that will check the other stand for damage K03702 - - 0.0 1114.0
DYD1_k127_443554_20 Catalyzes the covalent attachment of the prokaryotic ubiquitin-like protein modifier Pup to the proteasomal substrate proteins, thereby targeting them for proteasomal degradation. This tagging system is termed pupylation. The ligation reaction involves the side-chain carboxylate of the C-terminal glutamate of Pup and the side-chain amino group of a substrate lysine K03433 GO:0000502,GO:0003674,GO:0003824,GO:0004175,GO:0004298,GO:0005488,GO:0005515,GO:0005575,GO:0005576,GO:0005622,GO:0005623,GO:0005839,GO:0005886,GO:0006508,GO:0006807,GO:0008150,GO:0008152,GO:0008233,GO:0009056,GO:0009057,GO:0009405,GO:0009987,GO:0010498,GO:0016020,GO:0016787,GO:0019538,GO:0019774,GO:0019899,GO:0019941,GO:0030163,GO:0032991,GO:0035375,GO:0040007,GO:0043170,GO:0043632,GO:0044237,GO:0044238,GO:0044248,GO:0044257,GO:0044260,GO:0044265,GO:0044267,GO:0044419,GO:0044424,GO:0044464,GO:0051603,GO:0051704,GO:0070003,GO:0070011,GO:0071704,GO:0071944,GO:0140096,GO:1901564,GO:1901565,GO:1901575,GO:1902494,GO:1905368,GO:1905369 3.4.25.1 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001774 404.0
DYD1_k127_443554_21 Protein of unknown function (DUF3422) - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003024 412.0
DYD1_k127_443554_22 Peptidase family M23 - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005248 403.0
DYD1_k127_443554_23 Belongs to the ABC-4 integral membrane protein family. FtsX subfamily K09811 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002385 363.0
DYD1_k127_443554_24 ABC transporter K09812 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001915 343.0
DYD1_k127_443554_25 Catalyzes the ATP-dependent phosphorylation of thiamine- monophosphate (TMP) to form thiamine-pyrophosphate (TPP), the active form of vitamin B1 K00946 - 2.7.4.16 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000954 349.0
DYD1_k127_443554_26 Catalyzes the covalent attachment of the prokaryotic ubiquitin-like protein modifier Pup to the proteasomal substrate proteins, thereby targeting them for proteasomal degradation. This tagging system is termed pupylation. The ligation reaction involves the side-chain carboxylate of the C-terminal glutamate of Pup and the side-chain amino group of a substrate lysine K03432 - 3.4.25.1 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000609 336.0
DYD1_k127_443554_27 ribonucleoside-diphosphate reductase activity K07735 GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0044424,GO:0044444,GO:0044464 - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001978 306.0
DYD1_k127_443554_28 Belongs to the RNA methyltransferase TrmD family K00554 - 2.1.1.228 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000006481 291.0
DYD1_k127_443554_29 Endonuclease that specifically degrades the RNA of RNA- DNA hybrids K03470 - 3.1.26.4 0.00000000000000000000000000000000000000000000000000000000000000000000000000008757 264.0
DYD1_k127_443554_3 Surface antigen K07277 - - 0.0 1046.0
DYD1_k127_443554_30 Involved in unsaturated fatty acids biosynthesis. Catalyzes the dehydration of short chain beta-hydroxyacyl-ACPs and long chain saturated and unsaturated beta-hydroxyacyl-ACPs K02372 - 4.2.1.59 0.0000000000000000000000000000000000000000000000000000000000000000000000003826 249.0
DYD1_k127_443554_32 This protein is located at the 30S-50S ribosomal subunit interface and may play a role in the structure and function of the aminoacyl-tRNA binding site K02884 GO:0003674,GO:0003735,GO:0005198,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0015934,GO:0022625,GO:0022626,GO:0032991,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:1990904 - 0.00000000000000000000000000000000000000000000000000000002847 199.0
DYD1_k127_443554_33 Uncharacterized protein conserved in bacteria (DUF2062) K09928 - - 0.000000000000000000000000000000000000000000000000000000213 201.0
DYD1_k127_443554_34 Condenses 4-methyl-5-(beta-hydroxyethyl)thiazole monophosphate (THZ-P) and 2-methyl-4-amino-5-hydroxymethyl pyrimidine pyrophosphate (HMP-PP) to form thiamine monophosphate (TMP) K00788 - 2.5.1.3 0.0000000000000000000000000000000000000000000000000000006173 200.0
DYD1_k127_443554_35 Evidence 3 Function proposed based on presence of conserved amino acid motif, structural feature or limited homology K06142 - - 0.000000000000000000000000000000000000000000000000000005557 195.0
DYD1_k127_443554_36 ribosome binding K02860 GO:0000028,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006139,GO:0006364,GO:0006396,GO:0006725,GO:0006807,GO:0006996,GO:0008150,GO:0008152,GO:0009987,GO:0010467,GO:0016043,GO:0016070,GO:0016072,GO:0022607,GO:0022613,GO:0022618,GO:0030490,GO:0034470,GO:0034622,GO:0034641,GO:0034660,GO:0040007,GO:0042254,GO:0042255,GO:0042274,GO:0043170,GO:0043933,GO:0044085,GO:0044237,GO:0044238,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0065003,GO:0070925,GO:0071704,GO:0071826,GO:0071840,GO:0090304,GO:1901360 - 0.000000000000000000000000000000000000000000000000004468 188.0
DYD1_k127_443554_37 DNA-directed DNA polymerase activity K02347,K03581,K04477 - 3.1.11.5 0.000000000000000000000000000000000000000000000000007435 186.0
DYD1_k127_443554_38 Evidence 3 Function proposed based on presence of conserved amino acid motif, structural feature or limited homology K06142 - - 0.0000000000000000000000000000000000000000000000001621 182.0
DYD1_k127_443554_39 RNA recognition motif - - - 0.00000000000000000000000000000000000000001146 157.0
DYD1_k127_443554_4 protein catabolic process K13527 GO:0000302,GO:0000502,GO:0003674,GO:0003824,GO:0005488,GO:0005515,GO:0005575,GO:0005618,GO:0005622,GO:0005623,GO:0005886,GO:0006508,GO:0006807,GO:0006950,GO:0006979,GO:0008150,GO:0008152,GO:0009056,GO:0009057,GO:0009405,GO:0009987,GO:0010035,GO:0010498,GO:0010499,GO:0016020,GO:0016462,GO:0016787,GO:0016817,GO:0016818,GO:0016887,GO:0017111,GO:0019538,GO:0019941,GO:0022623,GO:0022624,GO:0030163,GO:0030312,GO:0032991,GO:0033554,GO:0034599,GO:0034614,GO:0035690,GO:0042221,GO:0042493,GO:0042802,GO:0043170,GO:0043335,GO:0043632,GO:0044237,GO:0044238,GO:0044248,GO:0044257,GO:0044260,GO:0044265,GO:0044267,GO:0044419,GO:0044424,GO:0044464,GO:0044877,GO:0050896,GO:0051409,GO:0051603,GO:0051704,GO:0051716,GO:0070628,GO:0070887,GO:0071241,GO:0071704,GO:0071731,GO:0071732,GO:0071944,GO:0097366,GO:0140030,GO:0140035,GO:1901564,GO:1901565,GO:1901575,GO:1901698,GO:1901699,GO:1901700,GO:1901701,GO:1902170,GO:1902494,GO:1905368,GO:1905369 - 0.0 1024.0
DYD1_k127_443554_40 Belongs to the UPF0145 family - - - 0.0000000000000000000000000000000000000001261 153.0
DYD1_k127_443554_42 Belongs to the bacterial ribosomal protein bS16 family K02959 GO:0003674,GO:0003735,GO:0005198,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005840,GO:0006412,GO:0006518,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0015935,GO:0019538,GO:0032991,GO:0034641,GO:0034645,GO:0043043,GO:0043170,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044446,GO:0044464,GO:0071704,GO:1901564,GO:1901566,GO:1901576,GO:1990904 - 0.0000000000000000000000000000000000001415 143.0
DYD1_k127_443554_43 Uncharacterised protein family UPF0102 K07460 - - 0.0000000000000000000000000000000001252 138.0
DYD1_k127_443554_44 Domain of unknown function (DUF4321) - - - 0.00000000000000000000000000001231 122.0
DYD1_k127_443554_46 Small metal-binding protein - - - 0.000000000000000000005482 97.0
DYD1_k127_443554_47 ThiS family K03154 - - 0.0000000000000001374 82.0
DYD1_k127_443554_48 Involved in the biosynthesis of lipid A, a phosphorylated glycolipid that anchors the lipopolysaccharide to the outer membrane of the cell K00677 - 2.3.1.129 0.0000000004954 60.0
DYD1_k127_443554_49 HemY protein K02498 GO:0005575,GO:0005623,GO:0005886,GO:0016020,GO:0044464,GO:0071944 - 0.000000152 55.0
DYD1_k127_443554_5 Catalyzes the covalent attachment of the prokaryotic ubiquitin-like protein modifier Pup to the proteasomal substrate proteins, thereby targeting them for proteasomal degradation. This tagging system is termed pupylation. The ligation reaction involves the side-chain carboxylate of the C-terminal glutamate of Pup and the side-chain amino group of a substrate lysine K13571 GO:0000166,GO:0000302,GO:0003674,GO:0003824,GO:0005488,GO:0005524,GO:0005575,GO:0005618,GO:0005623,GO:0005886,GO:0006464,GO:0006508,GO:0006807,GO:0006950,GO:0006979,GO:0008144,GO:0008150,GO:0008152,GO:0009056,GO:0009057,GO:0009405,GO:0009987,GO:0010035,GO:0010498,GO:0016020,GO:0016740,GO:0016874,GO:0016879,GO:0016881,GO:0017076,GO:0018193,GO:0018205,GO:0019538,GO:0019787,GO:0019941,GO:0030163,GO:0030312,GO:0030554,GO:0032446,GO:0032553,GO:0032555,GO:0032559,GO:0033554,GO:0034599,GO:0034614,GO:0035639,GO:0035690,GO:0036094,GO:0036211,GO:0042221,GO:0042493,GO:0043167,GO:0043168,GO:0043170,GO:0043412,GO:0043632,GO:0044237,GO:0044238,GO:0044248,GO:0044257,GO:0044260,GO:0044265,GO:0044267,GO:0044419,GO:0044464,GO:0050896,GO:0051409,GO:0051603,GO:0051704,GO:0051716,GO:0070490,GO:0070647,GO:0070887,GO:0071241,GO:0071704,GO:0071731,GO:0071732,GO:0071944,GO:0097159,GO:0097366,GO:0097367,GO:0140096,GO:1901265,GO:1901363,GO:1901564,GO:1901565,GO:1901575,GO:1901698,GO:1901699,GO:1901700,GO:1901701,GO:1902170 6.3.1.19 4.552e-282 869.0
DYD1_k127_443554_50 Belongs to the peptidase S1C family K04771 - 3.4.21.107 0.0001101 54.0
DYD1_k127_443554_6 Metal dependent phosphohydrolases with conserved 'HD' motif. K06885 - - 2.749e-264 822.0
DYD1_k127_443554_7 O-methyltransferase activity K13571,K20814 GO:0000166,GO:0003674,GO:0003824,GO:0005488,GO:0005524,GO:0006464,GO:0006508,GO:0006807,GO:0008144,GO:0008150,GO:0008152,GO:0008233,GO:0009056,GO:0009057,GO:0009987,GO:0010498,GO:0016787,GO:0016810,GO:0016811,GO:0017076,GO:0018193,GO:0018205,GO:0019538,GO:0019941,GO:0030163,GO:0030554,GO:0032446,GO:0032553,GO:0032555,GO:0032559,GO:0035639,GO:0036094,GO:0036211,GO:0043167,GO:0043168,GO:0043170,GO:0043412,GO:0043632,GO:0044237,GO:0044238,GO:0044248,GO:0044257,GO:0044260,GO:0044265,GO:0044267,GO:0051603,GO:0070490,GO:0070647,GO:0071704,GO:0097159,GO:0097367,GO:0140096,GO:1901265,GO:1901363,GO:1901564,GO:1901565,GO:1901575 3.5.1.119,6.3.1.19 3.679e-245 766.0
DYD1_k127_443554_8 efflux transmembrane transporter activity K12340 - - 1.135e-237 745.0
DYD1_k127_443554_9 Involved in targeting and insertion of nascent membrane proteins into the cytoplasmic membrane. Binds to the hydrophobic signal sequence of the ribosome-nascent chain (RNC) as it emerges from the ribosomes. The SRP-RNC complex is then targeted to the cytoplasmic membrane where it interacts with the SRP receptor FtsY K03106 - 3.6.5.4 3.218e-233 728.0
DYD1_k127_4465096_0 Catalyzes the synthesis of activated sulfate K00958 - 2.7.7.4 9.384e-272 846.0
DYD1_k127_4465096_1 Flavin containing amine oxidoreductase K01854 - 5.4.99.9 5.002e-197 625.0
DYD1_k127_4465096_10 Glycosyltransferase like family 2 - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000005242 280.0
DYD1_k127_4465096_11 - K14340 - - 0.00000000000000000000000000000000000000000000000000000000000000003676 243.0
DYD1_k127_4465096_12 lysyltransferase activity - - - 0.000000000000000000000000000000000000000000000000000001616 207.0
DYD1_k127_4465096_13 trans-aconitate 2-methyltransferase activity K02169,K15256 - 2.1.1.197 0.000000000000000000000000000000000000000000000000000009289 198.0
DYD1_k127_4465096_14 PFAM Polysaccharide deacetylase - - - 0.00000000000000000000000000000000000000007569 162.0
DYD1_k127_4465096_16 lysyltransferase activity K07027 - - 0.000000000000002724 89.0
DYD1_k127_4465096_17 SGNH hydrolase-like domain, acetyltransferase AlgX - - - 0.0000000000003138 81.0
DYD1_k127_4465096_18 - - - - 0.0000000000004551 72.0
DYD1_k127_4465096_19 Iron-regulated membrane protein - - - 0.00000001146 65.0
DYD1_k127_4465096_2 Protoporphyrinogen oxidase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003839 605.0
DYD1_k127_4465096_20 Flavin containing amine oxidoreductase - - - 0.0000005244 56.0
DYD1_k127_4465096_21 4-amino-4-deoxy-L-arabinose transferase activity - - - 0.0003039 53.0
DYD1_k127_4465096_3 Carbamoyltransferase C-terminus K00612 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001796 567.0
DYD1_k127_4465096_4 Polysaccharide biosynthesis protein - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008391 565.0
DYD1_k127_4465096_5 PFAM Glycosyl transferases group 1 - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004455 356.0
DYD1_k127_4465096_6 ABC-2 type transporter K01992,K09690 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006095 348.0
DYD1_k127_4465096_7 Glycosyltransferase like family 2 - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001079 344.0
DYD1_k127_4465096_8 Glycosyl transferase family 21 - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004023 324.0
DYD1_k127_4465096_9 SPTR Capsular exopolysaccharide biosynthesis protein (Wzm) - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000004157 292.0
DYD1_k127_4476859_0 Glycosyl hydrolase 36 superfamily, catalytic domain K13688,K18786 GO:0003674,GO:0003824,GO:0016740,GO:0016757 2.4.1.321 0.0 1629.0
DYD1_k127_4476859_1 Protein of unknown function (DUF1207) - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000009805 274.0
DYD1_k127_4476859_2 - - - - 0.0000000000000000000005569 99.0
DYD1_k127_4476859_3 peptidase K02557,K21471 - - 0.000000000000000000004975 102.0
DYD1_k127_4476859_4 Protein of unknown function (DUF3309) - - - 0.000000000000000001016 86.0
DYD1_k127_4498250_0 Acts as a processive, ATP-dependent zinc metallopeptidase for both cytoplasmic and membrane proteins. Plays a role in the quality control of integral membrane proteins K03798 - - 0.0 1107.0
DYD1_k127_4498250_1 Catalyzes the conversion of glucosamine-6-phosphate to glucosamine-1-phosphate K03431 - 5.4.2.10 2.645e-246 765.0
DYD1_k127_4498250_10 Ligates lysine onto the cytidine present at position 34 of the AUA codon-specific tRNA(Ile) that contains the anticodon CAU, in an ATP-dependent manner. Cytidine is converted to lysidine, thus changing the amino acid specificity of the tRNA from methionine to isoleucine K04075 - 6.3.4.19 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007417 373.0
DYD1_k127_4498250_11 Riboflavin kinase K11753 - 2.7.1.26,2.7.7.2 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006247 361.0
DYD1_k127_4498250_12 Phosphoribosyl transferase domain K00760 - 2.4.2.8 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000418 291.0
DYD1_k127_4498250_13 Catalyzes the condensation of para-aminobenzoate (pABA) with 6-hydroxymethyl-7,8-dihydropterin diphosphate (DHPt-PP) to form 7,8-dihydropteroate (H2Pte), the immediate precursor of folate derivatives K00796 - 2.5.1.15 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000003011 292.0
DYD1_k127_4498250_15 signal-transduction protein containing cAMP-binding and CBS domains K02342,K05847,K07182 - 2.7.7.7 0.000000000000000000000000000000000000000000000000000000000000009625 217.0
DYD1_k127_4498250_16 PFAM Glycosyl transferases group 1 - - - 0.000000000000000000000000000000000000000000000000001014 198.0
DYD1_k127_4498250_17 Catalyzes the 2'-O-methylation of the ribose of cytidine 1402 (C1402) in 16S rRNA K07056 - 2.1.1.198 0.0000000000000000000000000000000000000000002509 168.0
DYD1_k127_4498250_18 Sulfurtransferase TusA - - - 0.00000000000000000000000003367 109.0
DYD1_k127_4498250_19 helix_turn_helix, Lux Regulon - - - 0.000000001022 61.0
DYD1_k127_4498250_2 glucan 1,4-alpha-glucosidase activity - - - 2.735e-225 715.0
DYD1_k127_4498250_3 Belongs to the precorrin methyltransferase family K13542 - 2.1.1.107,4.2.1.75 4.006e-209 662.0
DYD1_k127_4498250_4 Catalyzes the NADPH-dependent reduction of glutamyl- tRNA(Glu) to glutamate 1-semialdehyde (GSA) K02492 - 1.2.1.70 1.343e-205 648.0
DYD1_k127_4498250_5 Competence protein K02238 - - 5.559e-205 666.0
DYD1_k127_4498250_6 Catalyzes the interconversion of methylthioribose-1- phosphate (MTR-1-P) into methylthioribulose-1-phosphate (MTRu-1- P) K08963 GO:0000096,GO:0000097,GO:0003674,GO:0003824,GO:0006082,GO:0006520,GO:0006555,GO:0006790,GO:0006807,GO:0008150,GO:0008152,GO:0008652,GO:0009058,GO:0009066,GO:0009067,GO:0009086,GO:0009987,GO:0016053,GO:0016853,GO:0016860,GO:0016861,GO:0017144,GO:0019509,GO:0019752,GO:0043094,GO:0043102,GO:0043436,GO:0044237,GO:0044238,GO:0044249,GO:0044272,GO:0044281,GO:0044283,GO:0046394,GO:0046523,GO:0071265,GO:0071267,GO:0071704,GO:1901564,GO:1901566,GO:1901576,GO:1901605,GO:1901607 5.3.1.23 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003055 563.0
DYD1_k127_4498250_7 Delta-aminolevulinic acid dehydratase K01698 - 4.2.1.24 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002517 529.0
DYD1_k127_4498250_8 Tetrapolymerization of the monopyrrole PBG into the hydroxymethylbilane pre-uroporphyrinogen in several discrete steps K01749 - 2.5.1.61 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000382 428.0
DYD1_k127_4498250_9 Cytochrome C assembly protein - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005884 396.0
DYD1_k127_4602901_1 bacterial OsmY and nodulation domain K04065 GO:0005575,GO:0005623,GO:0006457,GO:0006950,GO:0006970,GO:0006972,GO:0008150,GO:0009628,GO:0009987,GO:0030288,GO:0030313,GO:0031975,GO:0042597,GO:0044464,GO:0050896,GO:0061077 - 0.000000000000000001456 93.0
DYD1_k127_4602901_2 CsbD-like - - - 0.000000000000005324 78.0
DYD1_k127_4606652_0 ABC-type Fe3 transport system permease component K02011 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006103 324.0
DYD1_k127_4606652_1 lipid-transfer protein - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000003109 270.0
DYD1_k127_4606652_2 TIM-barrel fold metal-dependent hydrolase - - - 0.0000000000000000000000000000000000000000000000000001923 200.0
DYD1_k127_4606652_3 Metallo-beta-lactamase superfamily - - - 0.00000000000000000000000008728 117.0
DYD1_k127_4606652_4 Catalyzes the conversion of maleate to fumarate K01799,K06033 - 4.1.1.76,5.2.1.1 0.0000000000000000000002544 106.0
DYD1_k127_4606652_5 CoA-transferase family III K07749 - 2.8.3.16 0.000000000000000003354 86.0
DYD1_k127_4606652_6 iron ion homeostasis K02012 - - 0.0000000000002106 82.0
DYD1_k127_4606652_7 Bacterial extracellular solute-binding protein K02012 - - 0.00003515 52.0
DYD1_k127_4692323_0 Peptidase dimerisation domain K01436,K01438,K01439 - 3.5.1.16,3.5.1.18 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004544 332.0
DYD1_k127_4692323_1 Alpha beta hydrolase - - - 0.0000000000000000000000001128 115.0
DYD1_k127_4692323_2 Catalyzes the phosphorolysis of diverse nucleosides, yielding D-ribose 1-phosphate and the respective free bases. Can use uridine, adenosine, guanosine, cytidine, thymidine, inosine and xanthosine as substrates. Also catalyzes the reverse reactions K09913 - 2.4.2.1,2.4.2.2 0.0000000000000000000008934 104.0
DYD1_k127_4692323_3 Protein of unknown function (DUF1761) - - - 0.0000000000000000000009386 94.0
DYD1_k127_4698299_0 FtsX-like permease family K02004 - - 0.0 1059.0
DYD1_k127_4698299_1 Transglutaminase/protease-like homologues - - - 6.47e-196 634.0
DYD1_k127_4698299_2 ATPase family associated with various cellular activities (AAA) K03924 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001987 509.0
DYD1_k127_4698299_3 Peptidase family M1 domain K08776 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003511 462.0
DYD1_k127_4698299_4 Haem-binding uptake, Tiki superfamily, ChaN - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005325 402.0
DYD1_k127_4698299_5 PFAM Glucose Sorbosone dehydrogenase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001451 359.0
DYD1_k127_4698299_6 protein (some members contain a von Willebrand factor type A (vWA) domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000785 338.0
DYD1_k127_4698299_7 lipoprotein transporter activity K02003 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007357 314.0
DYD1_k127_4698299_8 lipolytic protein G-D-S-L family K10804 GO:0003674,GO:0003824,GO:0004620,GO:0004622,GO:0005488,GO:0005515,GO:0005575,GO:0005623,GO:0006508,GO:0006807,GO:0008150,GO:0008152,GO:0008233,GO:0016289,GO:0016290,GO:0016298,GO:0016787,GO:0016788,GO:0016790,GO:0019538,GO:0030288,GO:0030313,GO:0031975,GO:0042597,GO:0042802,GO:0043170,GO:0044238,GO:0044464,GO:0047617,GO:0052689,GO:0071704,GO:0140096,GO:1901564 3.1.1.5 0.00000000000000000000000000000000000000000000000000000000000000000000000000002949 265.0
DYD1_k127_4698299_9 zinc ion binding - GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0044424,GO:0044444,GO:0044464 - 0.0000000000000000000000000000000000000000000000000000000000000000001062 241.0
DYD1_k127_4723572_0 siderophore transport K02014 - - 0.0 1096.0
DYD1_k127_4723572_1 Evidence 2a Function of homologous gene experimentally demonstrated in an other organism K04771 GO:0003674,GO:0003824,GO:0004175,GO:0004252,GO:0005575,GO:0005623,GO:0006508,GO:0006807,GO:0008150,GO:0008152,GO:0008233,GO:0008236,GO:0016787,GO:0017171,GO:0019538,GO:0030288,GO:0030313,GO:0031975,GO:0042597,GO:0043170,GO:0044238,GO:0044464,GO:0070011,GO:0071704,GO:0140096,GO:1901564 3.4.21.107 5.128e-249 779.0
DYD1_k127_4723572_10 Ami_3 K01448 - 3.5.1.28 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000702 408.0
DYD1_k127_4723572_11 Serine acetyltransferase, N-terminal K00640 - 2.3.1.30 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008646 355.0
DYD1_k127_4723572_12 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase K00991 - 2.7.7.60 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004168 312.0
DYD1_k127_4723572_13 Formation of pseudouridine at positions 38, 39 and 40 in the anticodon stem and loop of transfer RNAs K06173 GO:0001522,GO:0003674,GO:0003824,GO:0006139,GO:0006396,GO:0006399,GO:0006400,GO:0006725,GO:0006807,GO:0008033,GO:0008150,GO:0008152,GO:0009451,GO:0009982,GO:0009987,GO:0010467,GO:0016070,GO:0016853,GO:0016866,GO:0031119,GO:0034470,GO:0034641,GO:0034660,GO:0043170,GO:0043412,GO:0044237,GO:0044238,GO:0046483,GO:0071704,GO:0090304,GO:1901360 5.4.99.12 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001421 307.0
DYD1_k127_4723572_14 Protein of unknown function (DUF3108) - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000007919 259.0
DYD1_k127_4723572_15 Involved in the biosynthesis of lipopolysaccharides (LPSs). Catalyzes the hydrolysis of 3-deoxy-D-manno-octulosonate 8-phosphate (KDO 8-P) to 3-deoxy-D-manno-octulosonate (KDO) and inorganic phosphate K03270 - 3.1.3.45 0.00000000000000000000000000000000000000000000000000000000000000000000002664 245.0
DYD1_k127_4723572_16 Involved in the biosynthesis of isopentenyl diphosphate (IPP) and dimethylallyl diphosphate (DMAPP), two major building blocks of isoprenoid compounds. Catalyzes the conversion of 4- diphosphocytidyl-2-C-methyl-D-erythritol 2-phosphate (CDP-ME2P) to 2-C-methyl-D-erythritol 2,4-cyclodiphosphate (ME-CPP) with a corresponding release of cytidine 5-monophosphate (CMP) K01770,K12506 - 2.7.7.60,4.6.1.12 0.000000000000000000000000000000000000000000000000000000000000000000003113 237.0
DYD1_k127_4723572_17 Acid phosphatase homologues K19302 - 3.6.1.27 0.0000000000000000000000000000000000000000000000000000000000002961 216.0
DYD1_k127_4723572_19 UDP-4-amino-4-deoxy-L-arabinose aminotransferase K13010 - 2.6.1.102 0.00000000000000000000000000000000000023 145.0
DYD1_k127_4723572_2 Belongs to the mannose-6-phosphate isomerase type 2 family K16011 - 2.7.7.13,5.3.1.8 1.372e-230 722.0
DYD1_k127_4723572_20 Is required not only for elongation of protein synthesis but also for the initiation of all mRNA translation through initiator tRNA(fMet) aminoacylation K01874 - 6.1.1.10 0.00000000000000000000000000000000415 128.0
DYD1_k127_4723572_21 23S rRNA-intervening sequence protein - - - 0.00000000000000000000000000000002823 129.0
DYD1_k127_4723572_22 YacP-like NYN domain K06962 - - 0.000000000000000000000000009668 116.0
DYD1_k127_4723572_3 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III K15778 - 5.4.2.2,5.4.2.8 1.235e-227 712.0
DYD1_k127_4723572_4 Stereospecific condensation of phosphoenolpyruvate (PEP) and D-erythrose-4-phosphate (E4P) giving rise to 3-deoxy-D- arabino-heptulosonate-7-phosphate (DAHP) K01626 GO:0003674,GO:0003824,GO:0003849,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006082,GO:0006520,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0008652,GO:0009058,GO:0009072,GO:0009073,GO:0009987,GO:0016053,GO:0016740,GO:0016765,GO:0019438,GO:0019752,GO:0042802,GO:0043436,GO:0044237,GO:0044238,GO:0044249,GO:0044281,GO:0044283,GO:0044424,GO:0044464,GO:0046394,GO:0071704,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576 2.5.1.54 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002771 546.0
DYD1_k127_4723572_5 DeoC/LacD family aldolase K11645 - 4.1.2.13 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008584 533.0
DYD1_k127_4723572_6 Cation efflux family K16264 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002507 459.0
DYD1_k127_4723572_7 Fructose-1-6-bisphosphatase, N-terminal domain K03841 - 3.1.3.11 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006354 443.0
DYD1_k127_4723572_8 TatD related DNase K03424 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003152 432.0
DYD1_k127_4723572_9 cobalamin synthesis protein - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000061 417.0
DYD1_k127_4757676_0 3-demethylubiquinone-9 3-methyltransferase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000001535 263.0
DYD1_k127_4757676_1 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily K04750 - - 0.000000000000000000000000000000000000000000000000000000000000002037 222.0
DYD1_k127_4757676_2 Bacterial protein of unknown function (DUF899) - - - 0.000000000000000000000000000000000000000007897 154.0
DYD1_k127_4757676_3 Domain of unknown function (DUF427) - - - 0.00000000004487 66.0
DYD1_k127_4788451_0 Helix-turn-helix XRE-family like proteins - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002406 349.0
DYD1_k127_4788451_1 Cyclic nucleotide-monophosphate binding domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000002199 270.0
DYD1_k127_4788451_10 Protein of unknown function (DUF1328) - - - 0.0000000000132 70.0
DYD1_k127_4788451_2 Pfam:KaiC K08482 - - 0.00000000000000000000000000000000000000000000000000000000000000000005026 239.0
DYD1_k127_4788451_3 phosphate ion binding K02040 - - 0.0000000000000000000000000000000000000000000000000000000000002096 222.0
DYD1_k127_4788451_4 helix_turn_helix, Lux Regulon - - - 0.0000000000000000000000000000000000000000000000000000002957 202.0
DYD1_k127_4788451_5 Belongs to the HesB IscA family K15724 - - 0.00000000000000000000000000000000000000000000000007268 179.0
DYD1_k127_4788451_7 - - - - 0.000000000000000000000000000000005902 136.0
DYD1_k127_4788451_8 Belongs to the small heat shock protein (HSP20) family K13993 - - 0.00000000000000000000000035 105.0
DYD1_k127_4833098_0 transcription factor binding - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006398 603.0
DYD1_k127_4833098_1 D-arabinono-1,4-lactone oxidase - - - 0.000000000000000000000000000000000000000000000000000015 198.0
DYD1_k127_4833098_2 LysE type translocator - - - 0.00000000000000000000002293 111.0
DYD1_k127_4833098_4 - - - - 0.0000000004917 64.0
DYD1_k127_4902142_0 5TM C-terminal transporter carbon starvation CstA K06200 - - 5.307e-318 978.0
DYD1_k127_4902142_1 cellulose binding - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000222 516.0
DYD1_k127_4902142_2 Protein of unknown function (DUF520) K09767 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000004258 263.0
DYD1_k127_4925094_0 DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates K03046 GO:0000428,GO:0005575,GO:0005622,GO:0005623,GO:0030880,GO:0032991,GO:0044424,GO:0044464,GO:0061695,GO:1902494,GO:1990234 2.7.7.6 0.0 2523.0
DYD1_k127_4925094_1 RNA polymerase beta subunit external 1 domain K03043 GO:0000428,GO:0005575,GO:0005622,GO:0005623,GO:0030880,GO:0032991,GO:0044424,GO:0044464,GO:0061695,GO:1902494,GO:1990234 2.7.7.6 0.0 1618.0
DYD1_k127_4925094_10 This protein promotes the GTP-dependent binding of aminoacyl-tRNA to the A-site of ribosomes during protein biosynthesis K02358 - - 0.0000000000000000004633 86.0
DYD1_k127_4925094_11 P-P-bond-hydrolysis-driven protein transmembrane transporter activity K03073 GO:0005575,GO:0005618,GO:0005623,GO:0005886,GO:0005887,GO:0008150,GO:0016020,GO:0016021,GO:0030312,GO:0031224,GO:0031226,GO:0040007,GO:0044425,GO:0044459,GO:0044464,GO:0071944 - 0.000000000000000072 84.0
DYD1_k127_4925094_2 Catalyzes the GTP-dependent ribosomal translocation step during translation elongation. During this step, the ribosome changes from the pre-translocational (PRE) to the post- translocational (POST) state as the newly formed A-site-bound peptidyl-tRNA and P-site-bound deacylated tRNA move to the P and E sites, respectively. Catalyzes the coordinated movement of the two tRNA molecules, the mRNA and conformational changes in the ribosome K02355 - - 0.0 1252.0
DYD1_k127_4925094_3 Forms part of the ribosomal stalk which helps the ribosome interact with GTP-bound translation factors. Is thus essential for accurate translation K02935 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001511 460.0
DYD1_k127_4925094_4 Binds directly to 23S rRNA. The L1 stalk is quite mobile in the ribosome, and is involved in E site tRNA release K02863 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002479 398.0
DYD1_k127_4925094_5 Participates in transcription elongation, termination and antitermination K02601 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003611 325.0
DYD1_k127_4925094_6 Forms part of the ribosomal stalk which helps the ribosome interact with GTP-bound translation factors K02867 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000006918 252.0
DYD1_k127_4925094_7 Interacts with and stabilizes bases of the 16S rRNA that are involved in tRNA selection in the A site and with the mRNA backbone. Located at the interface of the 30S and 50S subunits, it traverses the body of the 30S subunit contacting proteins on the other side and probably holding the rRNA structure together. The combined cluster of proteins S8, S12 and S17 appears to hold together the shoulder and platform of the 30S subunit K02950 GO:0003674,GO:0003735,GO:0005198,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005840,GO:0006412,GO:0006518,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0019538,GO:0032991,GO:0034641,GO:0034645,GO:0043043,GO:0043170,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044424,GO:0044444,GO:0044464,GO:0071704,GO:1901564,GO:1901566,GO:1901576,GO:1990904 - 0.00000000000000000000000000000000000000000000000000000000000000000000006762 241.0
DYD1_k127_4925094_8 One of the primary rRNA binding proteins, it binds directly to 16S rRNA where it nucleates assembly of the head domain of the 30S subunit. Is located at the subunit interface close to the decoding center, probably blocks exit of the E-site tRNA K02992 GO:0000028,GO:0003674,GO:0003676,GO:0003723,GO:0003729,GO:0003735,GO:0005198,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0006412,GO:0006518,GO:0006807,GO:0006996,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0015935,GO:0016043,GO:0019538,GO:0019843,GO:0022607,GO:0022613,GO:0022618,GO:0022626,GO:0022627,GO:0032991,GO:0034622,GO:0034641,GO:0034645,GO:0042254,GO:0042255,GO:0042274,GO:0043043,GO:0043170,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043603,GO:0043604,GO:0043933,GO:0044085,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:0065003,GO:0070925,GO:0071704,GO:0071826,GO:0071840,GO:0097159,GO:1901363,GO:1901564,GO:1901566,GO:1901576,GO:1990904 - 0.000000000000000000000000000000000000000000000000000000000000001296 221.0
DYD1_k127_4925094_9 Belongs to the bacterial ribosomal protein bL33 family K02913 - - 0.00000000000000000000341 94.0
DYD1_k127_4933766_0 RNA secondary structure unwinding K03724 - - 0.0 1937.0
DYD1_k127_4933766_1 Uncharacterized protein conserved in bacteria (DUF2330) K00347,K21163 GO:0000166,GO:0003674,GO:0003824,GO:0003954,GO:0005488,GO:0005575,GO:0005623,GO:0005886,GO:0006810,GO:0006811,GO:0006812,GO:0006814,GO:0008137,GO:0008144,GO:0008150,GO:0008152,GO:0010181,GO:0015672,GO:0016020,GO:0016491,GO:0016651,GO:0016655,GO:0019842,GO:0030001,GO:0030964,GO:0032553,GO:0032991,GO:0036094,GO:0043167,GO:0043168,GO:0044425,GO:0044464,GO:0048037,GO:0050136,GO:0050662,GO:0051179,GO:0051234,GO:0055114,GO:0071944,GO:0097159,GO:0097367,GO:0098796,GO:1901265,GO:1901363,GO:1902444,GO:1902494 1.6.5.8 7.255e-249 777.0
DYD1_k127_4933766_2 Evidence 2b Function of strongly homologous gene K00830 - 2.6.1.44,2.6.1.45,2.6.1.51 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001795 533.0
DYD1_k127_4933766_3 Catalyzes the formation of the isocyclic ring in chlorophyll biosynthesis. Mediates the cyclase reaction, which results in the formation of divinylprotochlorophyllide (Pchlide) characteristic of all chlorophylls from magnesium-protoporphyrin IX 13-monomethyl ester (MgPMME) K03594,K07052 - 1.16.3.1 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000214 447.0
DYD1_k127_4933766_4 Uncharacterized protein conserved in bacteria (DUF2330) K00347,K21163 GO:0000166,GO:0003674,GO:0003824,GO:0003954,GO:0005488,GO:0005575,GO:0005623,GO:0005886,GO:0006810,GO:0006811,GO:0006812,GO:0006814,GO:0008137,GO:0008144,GO:0008150,GO:0008152,GO:0010181,GO:0015672,GO:0016020,GO:0016491,GO:0016651,GO:0016655,GO:0019842,GO:0030001,GO:0030964,GO:0032553,GO:0032991,GO:0036094,GO:0043167,GO:0043168,GO:0044425,GO:0044464,GO:0048037,GO:0050136,GO:0050662,GO:0051179,GO:0051234,GO:0055114,GO:0071944,GO:0097159,GO:0097367,GO:0098796,GO:1901265,GO:1901363,GO:1902444,GO:1902494 1.6.5.8 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008727 426.0
DYD1_k127_4933766_5 imidazolonepropionase activity - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002147 381.0
DYD1_k127_4933766_6 ADP-glyceromanno-heptose 6-epimerase activity K00311 GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0044424,GO:0044444,GO:0044464 1.5.5.1 0.000000000000000000000000000000000000000000000000000000000000000000000000000000001214 281.0
DYD1_k127_4933766_7 Glycosyltransferase family 87 - - - 0.000000000000000000000000000000000000000005726 169.0
DYD1_k127_4970513_0 Adenylate cyclase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001276 491.0
DYD1_k127_4970513_1 Domain of unknown function (DUF4440) - - - 0.000000000002297 71.0
DYD1_k127_4991970_0 transferase activity, transferring glycosyl groups K00754 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001143 329.0
DYD1_k127_4991970_1 BNR repeat-like domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000008113 250.0
DYD1_k127_4991970_2 PFAM NUDIX domain - - - 0.0000000000000000000000000000000000000000000065 169.0
DYD1_k127_4991970_3 - - - - 0.000000000000000000000000000001031 129.0
DYD1_k127_4991970_4 Regulatory protein, FmdB family - - - 0.000000000001784 69.0
DYD1_k127_4991970_5 Neuraminidase (sialidase) - - - 0.000000004847 57.0
DYD1_k127_4991970_6 CAAX protease self-immunity - - - 0.000003812 51.0
DYD1_k127_5012909_0 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) K01214 - 3.2.1.68 0.0 1080.0
DYD1_k127_5012909_1 1,4-alpha-glucan branching enzyme activity K00700,K01236 GO:0000271,GO:0003674,GO:0003824,GO:0003844,GO:0005975,GO:0005976,GO:0005977,GO:0005978,GO:0006073,GO:0006091,GO:0006112,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009250,GO:0009987,GO:0015980,GO:0016051,GO:0016740,GO:0016757,GO:0016758,GO:0033692,GO:0034637,GO:0034645,GO:0043170,GO:0044042,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044262,GO:0044264,GO:0055114,GO:0071704,GO:1901576 2.4.1.18,3.2.1.141 2.221e-314 977.0
DYD1_k127_5012909_10 transferase activity, transferring glycosyl groups K13693 - 2.4.1.266 3.127e-197 626.0
DYD1_k127_5012909_11 4-alpha-glucanotransferase K00705,K06044 - 2.4.1.25,5.4.99.15 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004563 536.0
DYD1_k127_5012909_12 Belongs to the D-alanine--D-alanine ligase family K01921,K01955 - 6.3.2.4,6.3.5.5 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006585 485.0
DYD1_k127_5012909_13 Protein conserved in bacteria - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003776 475.0
DYD1_k127_5012909_14 Catalyzes the synthesis of ADP-glucose, a sugar donor used in elongation reactions on alpha-glucans K00975 - 2.7.7.27 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001518 469.0
DYD1_k127_5012909_15 His Kinase A (phosphoacceptor) domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000233 458.0
DYD1_k127_5012909_16 PFAM Glycosyl transferases group 1 K13057 - 2.4.1.245 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003689 440.0
DYD1_k127_5012909_17 Bacterial extracellular solute-binding protein K02027,K10236 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000217 404.0
DYD1_k127_5012909_18 Glycosyl transferase family 2 K21349 - 2.4.1.268 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002345 370.0
DYD1_k127_5012909_19 Protein of unknown function DUF72 - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003517 331.0
DYD1_k127_5012909_2 Alpha amylase, catalytic domain K06044 - 5.4.99.15 6.069e-313 988.0
DYD1_k127_5012909_20 TIGRFAM YihY family protein (not ribonuclease BN) K07058 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001866 333.0
DYD1_k127_5012909_21 PFAM ABC transporter related K10112 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003692 326.0
DYD1_k127_5012909_22 Binding-protein-dependent transport system inner membrane component K02025,K10237,K15771 GO:0008150,GO:0040007,GO:0044110,GO:0044116,GO:0044117,GO:0044403,GO:0044419,GO:0051704 - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008636 317.0
DYD1_k127_5012909_23 transmembrane transport - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004107 308.0
DYD1_k127_5012909_24 mannosylglycerate metabolic process K05947,K07026 GO:0000287,GO:0003674,GO:0003824,GO:0005488,GO:0006793,GO:0006796,GO:0008150,GO:0008152,GO:0009987,GO:0016311,GO:0016787,GO:0016788,GO:0016791,GO:0042578,GO:0043167,GO:0043169,GO:0044237,GO:0046872,GO:0046914,GO:0050897 2.4.1.217,3.1.3.70 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000668 303.0
DYD1_k127_5012909_25 PFAM MscS Mechanosensitive ion channel K22044 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000001177 302.0
DYD1_k127_5012909_26 mannose-1-phosphate guanylyltransferase activity K00971,K16011 - 2.7.7.13,5.3.1.8 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000006547 297.0
DYD1_k127_5012909_27 Phosphotransferase enzyme family K00700,K05343,K16146 GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005886,GO:0005975,GO:0005984,GO:0005991,GO:0005992,GO:0006793,GO:0006796,GO:0008150,GO:0008152,GO:0009058,GO:0009311,GO:0009312,GO:0009987,GO:0016020,GO:0016051,GO:0016310,GO:0034637,GO:0040007,GO:0044237,GO:0044238,GO:0044249,GO:0044262,GO:0044424,GO:0044444,GO:0044464,GO:0046351,GO:0046835,GO:0071704,GO:0071944,GO:1901576 2.4.1.18,2.7.1.175,3.2.1.1,5.4.99.16 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000863 301.0
DYD1_k127_5012909_28 Binding-protein-dependent transport system inner membrane component K02026,K10238 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000001671 273.0
DYD1_k127_5012909_29 - - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000145 277.0
DYD1_k127_5012909_3 4-alpha-glucanotransferase K00705 - 2.4.1.25 2.461e-272 857.0
DYD1_k127_5012909_30 transmembrane transport - - - 0.00000000000000000000000000000000000000000000000000000000000000000005591 238.0
DYD1_k127_5012909_31 Iron/manganese superoxide dismutases, C-terminal domain K04564 - 1.15.1.1 0.0000000000000000000000000000000000000000000000000000000000000007658 227.0
DYD1_k127_5012909_32 Transporter, small conductance mechanosensitive ion channel MscS family protein - - - 0.000000000000000000000000000000000000000000000000000003173 201.0
DYD1_k127_5012909_33 PFAM OmpA MotB domain protein K02557 - - 0.000000000000000000000000000000000000000000001519 184.0
DYD1_k127_5012909_34 PFAM OmpA MotB domain protein K02557 - - 0.00000000000000000000000000000000000001441 154.0
DYD1_k127_5012909_35 transferase activity, transferring glycosyl groups - - - 0.0000000000000000000000000000000000001431 149.0
DYD1_k127_5012909_36 FKBP-type peptidyl-prolyl cis-trans isomerase K01802 - 5.2.1.8 0.0000000000000000000000000000000000006271 143.0
DYD1_k127_5012909_37 AI-2E family transporter - - - 0.00000000000000000000000000000002079 133.0
DYD1_k127_5012909_38 sequence-specific DNA binding - - - 0.000000000000000000000000000004871 124.0
DYD1_k127_5012909_39 - - - - 0.00000000000000000000000000001591 126.0
DYD1_k127_5012909_4 Maltogenic Amylase, C-terminal domain K05343 - 3.2.1.1,5.4.99.16 9.221e-262 816.0
DYD1_k127_5012909_40 PFAM FKBP-type peptidyl-prolyl cis-trans isomerase K01802 - 5.2.1.8 0.000000000000000000000000002331 117.0
DYD1_k127_5012909_41 Belongs to the small heat shock protein (HSP20) family K13993 - - 0.00000000000000000000000035 105.0
DYD1_k127_5012909_42 Phage lysozyme K01185 - 3.2.1.17 0.000000000000000000000001516 113.0
DYD1_k127_5012909_43 Alpha amylase catalytic K01187 - 3.2.1.20 0.00000000000000000000001421 109.0
DYD1_k127_5012909_45 Part of the twin-arginine translocation (Tat) system that transports large folded proteins containing a characteristic twin-arginine motif in their signal peptide across membranes. TatA could form the protein-conducting channel of the Tat system K03116 - - 0.00000000000000000001124 94.0
DYD1_k127_5012909_46 1,4-alpha-glucan branching enzyme activity K00700 - 2.4.1.18 0.00000000000000003301 86.0
DYD1_k127_5012909_47 membrane K07058 GO:0005575,GO:0005623,GO:0005886,GO:0016020,GO:0044464,GO:0071944 - 0.000000000000171 83.0
DYD1_k127_5012909_48 tetR family - - - 0.0000000000002085 79.0
DYD1_k127_5012909_49 response regulator, receiver - - - 0.0000000000007099 77.0
DYD1_k127_5012909_5 Glycosyl hydrolases family 15 - - - 3.897e-237 747.0
DYD1_k127_5012909_50 Destroys radicals which are normally produced within the cells and which are toxic to biological systems K04564 - 1.15.1.1 0.000000003017 59.0
DYD1_k127_5012909_52 AI-2E family transporter - - - 0.0000002692 60.0
DYD1_k127_5012909_53 YtxH-like protein - - - 0.00001442 49.0
DYD1_k127_5012909_54 YtxH-like protein - - - 0.0004214 50.0
DYD1_k127_5012909_6 Maltosyltransferase that uses maltose 1-phosphate (M1P) as the sugar donor to elongate linear or branched alpha-(1- 4)- glucans. Is involved in a branched alpha-glucan biosynthetic pathway from trehalose, together with TreS, Mak and GlgB K16147 - 2.4.99.16 1.016e-230 734.0
DYD1_k127_5012909_7 Sigma-54 interaction domain K07714 - - 3.098e-214 676.0
DYD1_k127_5012909_8 Glycosyl transferase, family 2 K21349 - 2.4.1.268 9.736e-208 656.0
DYD1_k127_5012909_9 Catalyzes the formation of the alpha-1,6-glucosidic linkages in glycogen by scission of a 1,4-alpha-linked oligosaccharide from growing alpha-1,4-glucan chains and the subsequent attachment of the oligosaccharide to the alpha-1,6 position K00700,K01236 - 2.4.1.18,3.2.1.141 1.098e-206 662.0
DYD1_k127_5080989_0 Sodium/calcium exchanger protein K07301 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004969 333.0
DYD1_k127_5080989_1 Belongs to the peptidase M50B family - - - 0.000000000000000000000000000000000000000000000000000002261 197.0
DYD1_k127_5080989_2 calcium, potassium:sodium antiporter activity K07301 - - 0.00000000000000002356 83.0
DYD1_k127_5080989_3 pfam yhs - - - 0.0000000002005 63.0
DYD1_k127_5080989_4 Function proposed based on presence of conserved amino acid motif, structural feature or limited homology - - - 0.00002882 57.0
DYD1_k127_5080989_5 COG2931 RTX toxins and related Ca2 -binding proteins - - - 0.000672 51.0
DYD1_k127_5110561_0 Produces ATP from ADP in the presence of a proton gradient across the membrane. The alpha chain is a regulatory subunit K02111 - 3.6.3.14 2.404e-299 921.0
DYD1_k127_5110561_1 Produces ATP from ADP in the presence of a proton gradient across the membrane. The catalytic sites are hosted primarily by the beta subunits K02112 - 3.6.3.14 1.885e-294 906.0
DYD1_k127_5110561_10 Glycosyltransferase like family 2 - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008908 349.0
DYD1_k127_5110561_11 Phosphoserine phosphatase K02203 - 2.7.1.39,3.1.3.3 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003151 327.0
DYD1_k127_5110561_12 PSP1 C-terminal conserved region - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007181 315.0
DYD1_k127_5110561_13 phosphorelay signal transduction system - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001922 304.0
DYD1_k127_5110561_14 metal cluster binding - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000004356 291.0
DYD1_k127_5110561_15 Histidine kinase K03406 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000001162 282.0
DYD1_k127_5110561_16 F(1)F(0) ATP synthase produces ATP from ADP in the presence of a proton or sodium gradient. F-type ATPases consist of two structural domains, F(1) containing the extramembraneous catalytic core and F(0) containing the membrane proton channel, linked together by a central stalk and a peripheral stalk. During catalysis, ATP synthesis in the catalytic domain of F(1) is coupled via a rotary mechanism of the central stalk subunits to proton translocation K02113 - - 0.00000000000000000000000000000000000000000000000000000000000000001576 228.0
DYD1_k127_5110561_17 Produces ATP from ADP in the presence of a proton gradient across the membrane K02114 GO:0005575,GO:0005622,GO:0005623,GO:0006139,GO:0006163,GO:0006164,GO:0006725,GO:0006753,GO:0006754,GO:0006793,GO:0006796,GO:0006807,GO:0006810,GO:0006811,GO:0006812,GO:0008150,GO:0008152,GO:0009058,GO:0009117,GO:0009123,GO:0009124,GO:0009126,GO:0009127,GO:0009141,GO:0009142,GO:0009144,GO:0009145,GO:0009150,GO:0009152,GO:0009156,GO:0009161,GO:0009165,GO:0009167,GO:0009168,GO:0009199,GO:0009201,GO:0009205,GO:0009206,GO:0009259,GO:0009260,GO:0009987,GO:0015672,GO:0015985,GO:0015986,GO:0016020,GO:0016469,GO:0017144,GO:0018130,GO:0019438,GO:0019637,GO:0019693,GO:0032991,GO:0033178,GO:0034220,GO:0034641,GO:0034654,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0044424,GO:0044425,GO:0044464,GO:0045259,GO:0045261,GO:0046034,GO:0046390,GO:0046483,GO:0051179,GO:0051234,GO:0055085,GO:0055086,GO:0071704,GO:0072521,GO:0072522,GO:0090407,GO:0098655,GO:0098660,GO:0098662,GO:0098796,GO:1901135,GO:1901137,GO:1901293,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576,GO:1902600 - 0.0000000000000000000000000000000000000000000000000000000000000002676 223.0
DYD1_k127_5110561_18 Ubiquinol--cytochrome c reductase - - - 0.0000000000000000000000000000000000000000000000000000000000000006033 224.0
DYD1_k127_5110561_19 PAP2 superfamily K19302 - 3.6.1.27 0.0000000000000000000000000000000000000000000000000000003408 208.0
DYD1_k127_5110561_2 Dolichyl-phosphate-mannose-protein mannosyltransferase - - - 1.11e-221 701.0
DYD1_k127_5110561_20 Channel that opens in response to stretch forces in the membrane lipid bilayer. May participate in the regulation of osmotic pressure changes within the cell K03282 - - 0.000000000000000000000000000000000000000000000000001276 188.0
DYD1_k127_5110561_22 lipid-A-disaccharide synthase activity - - - 0.0000000000000000000000000000000000000001261 153.0
DYD1_k127_5110561_23 Zn peptidase - - - 0.0000000000000000000000000000000000001042 144.0
DYD1_k127_5110561_24 23S rRNA-intervening sequence protein - - - 0.0000000000000000000000000000000000008232 143.0
DYD1_k127_5110561_25 protein secretion K03116,K03117 GO:0003674,GO:0005215,GO:0005488,GO:0005515,GO:0005575,GO:0005623,GO:0005886,GO:0005887,GO:0006810,GO:0006886,GO:0008104,GO:0008150,GO:0008320,GO:0008565,GO:0009977,GO:0015031,GO:0015291,GO:0015399,GO:0015405,GO:0015450,GO:0015833,GO:0016020,GO:0016021,GO:0022804,GO:0022857,GO:0022884,GO:0031224,GO:0031226,GO:0032991,GO:0033036,GO:0033281,GO:0034613,GO:0040007,GO:0042802,GO:0042886,GO:0042887,GO:0043953,GO:0044425,GO:0044459,GO:0044464,GO:0045184,GO:0046907,GO:0051179,GO:0051234,GO:0051641,GO:0051649,GO:0055085,GO:0065002,GO:0070727,GO:0071702,GO:0071705,GO:0071806,GO:0071944,GO:0098796,GO:0098797,GO:1904680 - 0.00000000000000000000000000000000005428 135.0
DYD1_k127_5110561_26 Part of the twin-arginine translocation (Tat) system that transports large folded proteins containing a characteristic twin-arginine motif in their signal peptide across membranes. TatA could form the protein-conducting channel of the Tat system K03116 - - 0.0000000000000000000000005824 106.0
DYD1_k127_5110561_27 ABC-type branched-chain amino acid transport systems, periplasmic component K01999 - - 0.000000000005922 70.0
DYD1_k127_5110561_28 chlorophyll binding K03640 - - 0.0000004117 59.0
DYD1_k127_5110561_29 cellular water homeostasis K03442,K22044 - - 0.00006094 49.0
DYD1_k127_5110561_3 Forms passive diffusion pores that allow small molecular weight hydrophilic materials across the outer membrane - - - 9.395e-216 684.0
DYD1_k127_5110561_4 peptide catabolic process - - - 3.097e-213 685.0
DYD1_k127_5110561_5 acr, cog1565 K00412,K00971,K02275,K02389,K03177,K17624 - 1.9.3.1,2.7.7.13,3.2.1.97,5.4.99.25 1.193e-204 646.0
DYD1_k127_5110561_6 Involved in the tonB-independent uptake of proteins K03641 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001656 585.0
DYD1_k127_5110561_7 Protein involved in outer membrane biogenesis K07289 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001649 592.0
DYD1_k127_5110561_8 Produces ATP from ADP in the presence of a proton gradient across the membrane. The gamma chain is believed to be important in regulating ATPase activity and the flow of protons through the CF(0) complex K02115 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007344 535.0
DYD1_k127_5110561_9 deoxyhypusine monooxygenase activity - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007115 462.0
DYD1_k127_5141426_0 Periplasmic binding protein - - - 2.77e-240 760.0
DYD1_k127_5141426_1 WD40-like Beta Propeller Repeat K03641 - - 1.215e-225 705.0
DYD1_k127_5141426_10 Transposase K01991,K02557,K07161,K07484 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002539 338.0
DYD1_k127_5141426_11 Phage integrase, N-terminal SAM-like domain K04763 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001031 308.0
DYD1_k127_5141426_12 transferase activity, transferring glycosyl groups - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000001622 304.0
DYD1_k127_5141426_13 Outer membrane lipoprotein - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000008014 294.0
DYD1_k127_5141426_14 Cytochrome C oxidase, cbb3-type, subunit III - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000006147 281.0
DYD1_k127_5141426_15 Tetratricopeptide repeat - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000001574 274.0
DYD1_k127_5141426_16 Belongs to the ompA family K03640 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000003177 253.0
DYD1_k127_5141426_17 MotA/TolQ/ExbB proton channel family K03562 - - 0.000000000000000000000000000000000000000000000000000000000000000000000003321 250.0
DYD1_k127_5141426_18 Biopolymer transport protein ExbD/TolR K03560 - - 0.000000000000000000000000000000000000000000000000000000000000007697 221.0
DYD1_k127_5141426_19 energy transducer activity K03646,K03832 - - 0.0000000000000000000000000000000000000000000000000000162 201.0
DYD1_k127_5141426_2 This protein is involved in the repair of mismatches in DNA. It is required for dam-dependent methyl-directed DNA mismatch repair. May act as a molecular matchmaker , a protein that promotes the formation of a stable complex between two or more DNA-binding proteins in an ATP-dependent manner without itself being part of a final effector complex K03572 GO:0003674,GO:0003676,GO:0003677,GO:0003697,GO:0003824,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0006139,GO:0006259,GO:0006281,GO:0006298,GO:0006725,GO:0006807,GO:0006950,GO:0006974,GO:0008150,GO:0008152,GO:0009987,GO:0016462,GO:0016787,GO:0016817,GO:0016818,GO:0016887,GO:0017111,GO:0032300,GO:0032991,GO:0033554,GO:0034641,GO:0043170,GO:0044237,GO:0044238,GO:0044260,GO:0044424,GO:0044464,GO:0046483,GO:0050896,GO:0051716,GO:0071704,GO:0090304,GO:0097159,GO:1901360,GO:1901363,GO:1990391 - 2.37e-208 664.0
DYD1_k127_5141426_20 Peptidase family M50 - - - 0.000000000000000000000000000000000000000000000007788 180.0
DYD1_k127_5141426_3 tRNA synthetases class I (W and Y) K01867 - 6.1.1.2 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004258 569.0
DYD1_k127_5141426_4 pfkB family carbohydrate kinase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003069 542.0
DYD1_k127_5141426_5 Evidence 5 No homology to any previously reported sequences K07126 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006975 548.0
DYD1_k127_5141426_6 Catalyzes the reversible phosphorylation of S-methyl-5'- thioadenosine (MTA) to adenine and 5-methylthioribose-1-phosphate. Involved in the breakdown of MTA, a major by-product of polyamine biosynthesis. Responsible for the first step in the methionine salvage pathway after MTA has been generated from S- adenosylmethionine. Has broad substrate specificity with 6- aminopurine nucleosides as preferred substrates K00772 - 2.4.2.28 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002759 437.0
DYD1_k127_5141426_7 Catalyzes the transfer of a dimethylallyl group onto the adenine at position 37 in tRNAs that read codons beginning with uridine, leading to the formation of N6-(dimethylallyl)adenosine (i(6)A) K00791 GO:0003674,GO:0003824,GO:0006139,GO:0006396,GO:0006399,GO:0006400,GO:0006725,GO:0006807,GO:0008033,GO:0008150,GO:0008152,GO:0009451,GO:0009987,GO:0010467,GO:0016070,GO:0016740,GO:0016765,GO:0034470,GO:0034641,GO:0034660,GO:0043170,GO:0043412,GO:0044237,GO:0044238,GO:0046483,GO:0052381,GO:0071704,GO:0090304,GO:0140098,GO:0140101,GO:1901360 2.5.1.75 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000215 395.0
DYD1_k127_5141426_8 Galactose oxidase, central domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001267 379.0
DYD1_k127_5141426_9 Helix-turn-helix domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001769 370.0
DYD1_k127_5148689_0 Catalyzes the phosphorylation of pyruvate to phosphoenolpyruvate K01007 - 2.7.9.2 0.0 1227.0
DYD1_k127_5148689_1 Cation transporter/ATPase, N-terminus K01537 - 3.6.3.8 1.774e-321 1012.0
DYD1_k127_5148689_10 it plays a direct role in the translocation of protons across the membrane K02108 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003309 382.0
DYD1_k127_5148689_11 Component of the F(0) channel, it forms part of the peripheral stalk, linking F(1) to F(0) K02109 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000747 338.0
DYD1_k127_5148689_12 Peptidyl-prolyl cis-trans isomerase K01802,K03772,K03773 - 5.2.1.8 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002833 323.0
DYD1_k127_5148689_13 PFAM Stage II sporulation E family protein K01079,K07315 - 3.1.3.3 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001311 333.0
DYD1_k127_5148689_14 galactose-1-phosphate K00965 - 2.7.7.12 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000009906 303.0
DYD1_k127_5148689_15 PFAM Methyltransferase type 12 - - - 0.000000000000000000000000000000000000000000000000000000000000000004265 231.0
DYD1_k127_5148689_16 Ribose/Galactose Isomerase K01808 - 5.3.1.6 0.0000000000000000000000000000000000000000000000000000000001272 206.0
DYD1_k127_5148689_17 HD domain K01139 - 2.7.6.5,3.1.7.2 0.000000000000000000000000000000000000000000000000000000002117 205.0
DYD1_k127_5148689_18 Putative F0F1-ATPase subunit Ca2+/Mg2+ transporter K02116 - - 0.0000000000000000000000000000000000000000000001007 170.0
DYD1_k127_5148689_19 RNA recognition motif - - - 0.0000000000000000000000000000000000000000003689 160.0
DYD1_k127_5148689_2 Catalyzes the conversion of acetate into acetyl-CoA (AcCoA), an essential intermediate at the junction of anabolic and catabolic pathways. AcsA undergoes a two-step reaction. In the first half reaction, AcsA combines acetate with ATP to form acetyl-adenylate (AcAMP) intermediate. In the second half reaction, it can then transfer the acetyl group from AcAMP to the sulfhydryl group of CoA, forming the product AcCoA K01895 - 6.2.1.1 2.551e-301 935.0
DYD1_k127_5148689_20 F(1)F(0) ATP synthase produces ATP from ADP in the presence of a proton or sodium gradient. F-type ATPases consist of two structural domains, F(1) containing the extramembraneous catalytic core and F(0) containing the membrane proton channel, linked together by a central stalk and a peripheral stalk. During catalysis, ATP synthesis in the catalytic domain of F(1) is coupled via a rotary mechanism of the central stalk subunits to proton translocation K02110 - - 0.0000000000000000000000000000000000000004694 150.0
DYD1_k127_5148689_21 involved in producing ATP from ADP in the presence of the proton motive force across the membrane K02114 - - 0.0000000000000000000000000000000000003209 146.0
DYD1_k127_5148689_22 Protein of unknown function (DUF1622) - - - 0.00000000000000000000000000003173 121.0
DYD1_k127_5148689_24 - - - - 0.000000000000000000000000003183 112.0
DYD1_k127_5148689_25 N-ATPase, AtpR subunit - - - 0.000000000000000000000003094 108.0
DYD1_k127_5148689_26 ribosomal large subunit export from nucleus - - - 0.000000000000000000000004867 105.0
DYD1_k127_5148689_27 - - - - 0.000000000000002934 82.0
DYD1_k127_5148689_28 pfam yhs - - - 0.00000000000001229 75.0
DYD1_k127_5148689_29 PFAM nuclease (SNase domain protein) - - - 0.00000000000002891 74.0
DYD1_k127_5148689_3 Produces ATP from ADP in the presence of a proton gradient across the membrane. The alpha chain is a regulatory subunit K02111 - 3.6.3.14 1.145e-290 897.0
DYD1_k127_5148689_30 Integrase core domain - - - 0.00000000000005026 72.0
DYD1_k127_5148689_31 STAS domain - - - 0.00000000006087 70.0
DYD1_k127_5148689_4 Produces ATP from ADP in the presence of a proton gradient across the membrane. The catalytic sites are hosted primarily by the beta subunits K02112 - 3.6.3.14 6.851e-279 863.0
DYD1_k127_5148689_5 Glycosyl transferases group 1 K13057 - 2.4.1.245 6.34e-224 699.0
DYD1_k127_5148689_6 PFAM AMP-dependent synthetase K01897 - 6.2.1.3 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003038 529.0
DYD1_k127_5148689_7 ATP synthase K02115 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003133 432.0
DYD1_k127_5148689_8 Rossmann fold nucleotide-binding protein K06966 - 3.2.2.10 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003567 422.0
DYD1_k127_5148689_9 calcium, potassium:sodium antiporter activity K07301 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004929 420.0
DYD1_k127_518489_0 Catalyzes the S-adenosyl-L-methionine-dependent formation of N(1)-methyladenine at position 58 (m1A58) in tRNA K07442 - 2.1.1.219,2.1.1.220 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007823 467.0
DYD1_k127_518489_1 NfeD-like C-terminal, partner-binding K07403 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003907 429.0
DYD1_k127_518489_2 oxidoreductase activity, acting on CH-OH group of donors - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003293 315.0
DYD1_k127_518489_3 prohibitin homologues - - - 0.000000000000000000000000000000000000000000000000009765 186.0
DYD1_k127_5226544_0 Tfp pilus assembly protein tip-associated adhesin K02674 - - 2.449e-253 804.0
DYD1_k127_5226544_1 PhoH-like protein K06217 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001437 524.0
DYD1_k127_5226544_2 Involved in targeting and insertion of nascent membrane proteins into the cytoplasmic membrane. Acts as a receptor for the complex formed by the signal recognition particle (SRP) and the ribosome-nascent chain (RNC) K03110 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004637 416.0
DYD1_k127_5226544_3 self proteolysis - - - 0.000000000000000000000000000000000000000000000000000000000000000008015 238.0
DYD1_k127_5226544_4 Single strand-specific metallo-endoribonuclease involved in late-stage 70S ribosome quality control and in maturation of the 3' terminus of the 16S rRNA K07042 - - 0.0000000000000000000000000000000000000001475 154.0
DYD1_k127_5229446_0 PFAM alpha amylase, catalytic K01208 - 3.2.1.133,3.2.1.135,3.2.1.54 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001223 567.0
DYD1_k127_5229446_1 Glutathione synthase ribosomal protein S6 modification enzyme (Glutaminyl transferase) - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001198 341.0
DYD1_k127_5229446_2 ergothioneine biosynthetic process K01919,K06048 - 6.3.2.2 0.0000000000000000000000000000000000000000000000000000000000000000000000281 258.0
DYD1_k127_5229446_3 Mediates influx of magnesium ions K03284,K16074 - - 0.0000000000000000000000000000000000000000000000000000000000000006956 232.0
DYD1_k127_5229446_4 mechanosensitive ion channel - - - 0.0000000000000000000000000000000000000000000000000113 186.0
DYD1_k127_5229446_5 - K06992 - - 0.0000000000000000000000000000000000000000001872 164.0
DYD1_k127_5229446_6 domain protein - - - 0.00000000000000000000000000000000008727 136.0
DYD1_k127_5239213_0 Carbohydrate phosphorylase K00688 - 2.4.1.1 1.498e-296 920.0
DYD1_k127_5239213_1 Catalyzes the oxidation of glucose 6-phosphate to 6- phosphogluconolactone K00036 - 1.1.1.363,1.1.1.49 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005433 494.0
DYD1_k127_5239213_10 AI-2E family transporter - - - 0.00000000000000000000004072 110.0
DYD1_k127_5239213_11 Cation transporter/ATPase, N-terminus K01537 - 3.6.3.8 0.0000000000000528 80.0
DYD1_k127_5239213_12 Protein of unknown function (DUF2933) - - - 0.00000000000007494 74.0
DYD1_k127_5239213_13 Glycosyl hydrolase family 57 - - - 0.000000005777 59.0
DYD1_k127_5239213_14 membrane protein (DUF2078) K08982 - - 0.00000003327 58.0
DYD1_k127_5239213_15 ATPase, P-type (transporting), HAD superfamily, subfamily IC K01537 - 3.6.3.8 0.0000003824 52.0
DYD1_k127_5239213_16 - - - - 0.00004721 48.0
DYD1_k127_5239213_17 Cytochrome b/b6/petB K00412,K03888 - - 0.00008068 48.0
DYD1_k127_5239213_2 Isoprenylcysteine carboxyl methyltransferase (ICMT) family - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001862 317.0
DYD1_k127_5239213_3 PFAM blue (type 1) copper domain protein - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001082 304.0
DYD1_k127_5239213_4 metallopeptidase activity K06212,K06402 GO:0003674,GO:0003824,GO:0003938,GO:0005575,GO:0005618,GO:0005622,GO:0005623,GO:0005737,GO:0005886,GO:0005887,GO:0006139,GO:0006163,GO:0006164,GO:0006183,GO:0006725,GO:0006753,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009116,GO:0009117,GO:0009119,GO:0009141,GO:0009142,GO:0009144,GO:0009145,GO:0009150,GO:0009152,GO:0009163,GO:0009165,GO:0009199,GO:0009201,GO:0009205,GO:0009206,GO:0009259,GO:0009260,GO:0009987,GO:0016020,GO:0016021,GO:0016491,GO:0016614,GO:0016616,GO:0018130,GO:0019438,GO:0019637,GO:0019693,GO:0030312,GO:0031224,GO:0031226,GO:0034404,GO:0034641,GO:0034654,GO:0042278,GO:0042451,GO:0042455,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0044283,GO:0044424,GO:0044425,GO:0044459,GO:0044464,GO:0046039,GO:0046128,GO:0046129,GO:0046390,GO:0046483,GO:0055086,GO:0055114,GO:0071704,GO:0071944,GO:0072521,GO:0072522,GO:0090407,GO:1901068,GO:1901070,GO:1901135,GO:1901137,GO:1901293,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576,GO:1901657,GO:1901659 - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003691 310.0
DYD1_k127_5239213_5 Putative cyclase K07130 - 3.5.1.9 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000005591 280.0
DYD1_k127_5239213_6 ubiE/COQ5 methyltransferase family - - - 0.000000000000000000000000000000000000000000000000000000000000000000000711 241.0
DYD1_k127_5239213_7 - - - - 0.0000000000000000000000000000006908 128.0
DYD1_k127_5239213_9 - - - - 0.000000000000000000000005364 104.0
DYD1_k127_5251797_0 Part of a stress-induced multi-chaperone system, it is involved in the recovery of the cell from heat-induced damage, in cooperation with DnaK, DnaJ and GrpE K03695 - - 0.0 1386.0
DYD1_k127_5251797_1 PD-(D/E)XK nuclease superfamily - - - 0.0 1079.0
DYD1_k127_5251797_10 inositol 2-dehydrogenase activity - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000001103 282.0
DYD1_k127_5251797_12 - K07184,K07777,K12065,K13527 - 2.7.13.3 0.000000000000000000000000000000000000000000000000005265 190.0
DYD1_k127_5251797_14 Thioredoxin domain - - - 0.000000000000000000000000000000000000000001925 156.0
DYD1_k127_5251797_15 Zincin-like metallopeptidase - - - 0.000000000000000000000000000000000000002986 151.0
DYD1_k127_5251797_17 Protein of unknown function (DUF423) - GO:0005575,GO:0005623,GO:0005886,GO:0016020,GO:0044464,GO:0071944 - 0.00000000000000000000000000000000004004 138.0
DYD1_k127_5251797_18 sequence-specific DNA binding - - - 0.00000000000000000000000000000002936 126.0
DYD1_k127_5251797_2 exonuclease activity K16899 - 3.6.4.12 1.015e-261 842.0
DYD1_k127_5251797_21 DNA topoisomerase II activity K03167 - 5.99.1.3 0.0000000000000000000005257 104.0
DYD1_k127_5251797_22 gas vesicle protein - - - 0.00000000000000001718 85.0
DYD1_k127_5251797_23 adenosylhomocysteine nucleosidase activity - - - 0.0000000000000044 84.0
DYD1_k127_5251797_24 - - - - 0.00000000003246 72.0
DYD1_k127_5251797_28 - - - - 0.00000294 51.0
DYD1_k127_5251797_3 Bacterial regulatory protein, Fis family K07715 - - 5.411e-237 741.0
DYD1_k127_5251797_30 - K07184,K07777,K12065,K13527 - 2.7.13.3 0.00008185 48.0
DYD1_k127_5251797_4 Magnesium chelatase, subunit ChlI C-terminal K07391 - - 1.426e-231 726.0
DYD1_k127_5251797_5 DNA topoisomerase VI subunit A K03166 - 5.99.1.3 9.399e-221 687.0
DYD1_k127_5251797_6 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain K07711 - 2.7.13.3 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006095 596.0
DYD1_k127_5251797_7 Transfers the N-acyl diglyceride group on what will become the N-terminal cysteine of membrane lipoproteins K13292 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000124 386.0
DYD1_k127_5251797_8 Alpha/beta hydrolase family K01061 - 3.1.1.45 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007844 359.0
DYD1_k127_5272973_0 Tripartite ATP-independent periplasmic transporter, DctM component - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006166 486.0
DYD1_k127_5272973_1 Permuted papain-like amidase enzyme, YaeF/YiiX, C92 family - - - 0.000000000000000000000000000000000000000000000000000000000001722 233.0
DYD1_k127_5302776_0 Belongs to the UDP-glucose GDP-mannose dehydrogenase family K00012 - 1.1.1.22 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000135 419.0
DYD1_k127_5302776_1 PFAM NAD-dependent epimerase dehydratase K01784 - 5.1.3.2 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000001739 304.0
DYD1_k127_5302776_2 Belongs to the DegT DnrJ EryC1 family - - - 0.00000000000000000000000000000000000000000002462 166.0
DYD1_k127_5302776_3 SIS domain K03271 - 5.3.1.28 0.00002798 48.0
DYD1_k127_5330298_0 polysaccharide deacetylase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001608 341.0
DYD1_k127_5330298_1 PFAM NAD-dependent epimerase dehydratase K01784 - 5.1.3.2 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001405 330.0
DYD1_k127_5330298_2 eight transmembrane protein EpsH - - - 0.00000000000000000000000000000000000000000000000000000000000000000000005004 252.0
DYD1_k127_5333662_0 Probable molybdopterin binding domain K03750 - 2.10.1.1 4.95e-237 737.0
DYD1_k127_5333662_1 Trypsin K04771 - 3.4.21.107 7.565e-229 716.0
DYD1_k127_5333662_2 Binds and transfers iron-sulfur (Fe-S) clusters to target apoproteins. Can hydrolyze ATP - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001285 602.0
DYD1_k127_5333662_3 Part of the twin-arginine translocation (Tat) system that transports large folded proteins containing a characteristic twin-arginine motif in their signal peptide across membranes K03118 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007519 485.0
DYD1_k127_5333662_4 macromolecule localization K01421,K01992,K09690 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001813 411.0
DYD1_k127_5333662_5 denitrification pathway K02569,K03532,K15876 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000228 378.0
DYD1_k127_5333662_6 AAA domain, putative AbiEii toxin, Type IV TA system K01990 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002359 374.0
DYD1_k127_5333662_7 Mo-molybdopterin cofactor metabolic process K03750,K03753,K13818 GO:0000166,GO:0001882,GO:0001883,GO:0003674,GO:0005488,GO:0005525,GO:0017076,GO:0019001,GO:0032549,GO:0032550,GO:0032553,GO:0032555,GO:0032561,GO:0035639,GO:0036094,GO:0043167,GO:0043168,GO:0097159,GO:0097367,GO:1901265,GO:1901363 2.10.1.1,2.7.7.77 0.000000000000000000000000000000000000000000000000000000000000000000000000000003015 264.0
DYD1_k127_5333662_8 RNA recognition motif - - - 0.000000000000000000000000000000000000000001047 162.0
DYD1_k127_5355938_0 thiamine transport K02011 - - 1.485e-224 706.0
DYD1_k127_5355938_1 ATPase activity K02010 - 3.6.3.30 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002395 497.0
DYD1_k127_5355938_2 protein flavinylation K03734 - 2.7.1.180 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001257 387.0
DYD1_k127_5355938_3 - K12065 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000003736 256.0
DYD1_k127_5355938_4 bacteriocin transport K03561,K03562 GO:0005575,GO:0005623,GO:0005886,GO:0005887,GO:0006810,GO:0008104,GO:0008150,GO:0015031,GO:0015833,GO:0016020,GO:0016021,GO:0017038,GO:0031224,GO:0031226,GO:0033036,GO:0042886,GO:0044425,GO:0044459,GO:0044464,GO:0045184,GO:0051179,GO:0051234,GO:0071702,GO:0071705,GO:0071944 - 0.000000000000000000000000000000000000000000000000000000000000000001028 229.0
DYD1_k127_5355938_6 iron ion homeostasis K02012 GO:0005575,GO:0005623,GO:0042597,GO:0044464 - 0.00000000000000000000001286 100.0
DYD1_k127_5355938_7 biopolymer transport protein K03559 - - 0.0000000000000009384 81.0
DYD1_k127_5355938_8 - - - - 0.000009598 50.0
DYD1_k127_5355938_9 Interacts with outer membrane receptor proteins that carry out high-affinity binding and energy dependent uptake into the periplasmic space of specific substrates. It could act to transduce energy from the cytoplasmic membrane to specific energy- requiring processes in the outer membrane, resulting in the release into the periplasm of ligands bound by these outer membrane proteins K03832 - - 0.0000991 54.0
DYD1_k127_5373579_0 helix_turn_helix, Lux Regulon - - - 0.00000000000000000000000000000000000000000000000000000001187 207.0
DYD1_k127_5373579_1 Pfam:KaiC K08482 - - 0.00000000000000000000000000000000000000000000003747 176.0
DYD1_k127_5373579_2 SMART cyclic nucleotide-binding - - - 0.00000000000000000000000000000002777 126.0
DYD1_k127_5461039_0 PFAM Copper resistance D K07245 - - 9.483e-292 911.0
DYD1_k127_5461039_1 - K12065 - - 6.642e-201 629.0
DYD1_k127_5461039_2 FMN binding K19339,K19343 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001909 323.0
DYD1_k127_5461039_4 - - - - 0.000000000000000000000000000000000000000000000000000000000000000000000368 243.0
DYD1_k127_5461039_5 - - - - 0.000000000000000000000000000000000000000000000000000000000002492 214.0
DYD1_k127_5461039_6 - - - - 0.000000000000000000000000000000000000000000000000000000008708 204.0
DYD1_k127_5461039_7 PFAM Copper resistance protein CopC K07156 - - 0.0000000000000000000000000000000000000000000000004736 181.0
DYD1_k127_5461039_8 PFAM Ammonia monooxygenase particulate methane monooxygenase, subunit C K10946 - - 0.000000004856 58.0
DYD1_k127_546396_0 amino acids such as valine, to avoid such errors it has two additional distinct tRNA(Ile)-dependent editing activities. One activity is designated as 'pretransfer' editing and involves the hydrolysis of activated Val-AMP. The other activity is designated 'posttransfer' editing and involves deacylation of mischarged Val-tRNA(Ile) K01870 - 6.1.1.5 0.0 1363.0
DYD1_k127_546396_1 Catalyzes the synthesis of the hydroxymethylpyrimidine phosphate (HMP-P) moiety of thiamine from aminoimidazole ribotide (AIR) in a radical S-adenosyl-L-methionine (SAM)-dependent reaction K03147 GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006725,GO:0006766,GO:0006767,GO:0006772,GO:0006790,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009110,GO:0009228,GO:0009987,GO:0017144,GO:0018130,GO:0019438,GO:0034641,GO:0042364,GO:0042723,GO:0042724,GO:0044237,GO:0044249,GO:0044271,GO:0044272,GO:0044281,GO:0044283,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0071704,GO:0072527,GO:0072528,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576 4.1.99.17 1.144e-313 970.0
DYD1_k127_546396_11 Belongs to the Fur family K03711 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000004142 262.0
DYD1_k127_546396_12 glycerophosphoryl diester phosphodiesterase K01113,K01126 - 3.1.3.1,3.1.4.46 0.0000000000000000000000000000000000000000000000000000000000000000000000000007195 277.0
DYD1_k127_546396_14 - - - - 0.0000000000000000000000000000000000000000000000000000000000000003232 221.0
DYD1_k127_546396_15 - - - - 0.0000000000000000000000000000000000000000000000002399 178.0
DYD1_k127_546396_16 GGDEF domain - - - 0.00000000000000000000000000000000000000000000002203 173.0
DYD1_k127_546396_2 Catalyzes the condensation of iminoaspartate with dihydroxyacetone phosphate to form quinolinate K03517 GO:0003674,GO:0003824,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006082,GO:0006139,GO:0006520,GO:0006531,GO:0006725,GO:0006732,GO:0006733,GO:0006753,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0008987,GO:0009058,GO:0009066,GO:0009108,GO:0009117,GO:0009165,GO:0009435,GO:0009987,GO:0016053,GO:0017144,GO:0018130,GO:0019355,GO:0019359,GO:0019362,GO:0019363,GO:0019438,GO:0019637,GO:0019674,GO:0019752,GO:0019805,GO:0034627,GO:0034628,GO:0034641,GO:0034654,GO:0043436,GO:0043648,GO:0043650,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0044283,GO:0044424,GO:0044444,GO:0044464,GO:0046394,GO:0046483,GO:0046496,GO:0046874,GO:0048037,GO:0051186,GO:0051188,GO:0051536,GO:0051539,GO:0051540,GO:0055086,GO:0071704,GO:0072524,GO:0072525,GO:0090407,GO:1901293,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576,GO:1901605 2.5.1.72 1.983e-215 674.0
DYD1_k127_546396_3 The glycine cleavage system catalyzes the degradation of glycine K00605,K06980,K22086 - 1.5.99.5,2.1.2.10 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001931 547.0
DYD1_k127_546396_4 iron ion homeostasis K02012 GO:0005575,GO:0005623,GO:0042597,GO:0044464 - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001524 486.0
DYD1_k127_546396_5 Broad specificity carboxypetidase that releases amino acids sequentially from the C-terminus, including neutral, aromatic, polar and basic residues K01299,K03281 - 3.4.17.19 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002439 496.0
DYD1_k127_546396_6 Involved in the biosynthesis of the thiazole moiety of thiamine. Catalyzes the conversion of NAD and glycine to adenosine diphosphate 5-(2-hydroxyethyl)-4-methylthiazole-2-carboxylate (ADT), an adenylated thiazole intermediate, using free sulfide as a source of sulfur K03146 GO:0003674,GO:0005488,GO:0005506,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006725,GO:0006766,GO:0006767,GO:0006772,GO:0006790,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009110,GO:0009228,GO:0009987,GO:0017144,GO:0018130,GO:0018131,GO:0019438,GO:0034641,GO:0042364,GO:0042723,GO:0042724,GO:0043167,GO:0043169,GO:0044237,GO:0044249,GO:0044271,GO:0044272,GO:0044281,GO:0044283,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0046484,GO:0046872,GO:0046914,GO:0052837,GO:0052838,GO:0071704,GO:0072527,GO:0072528,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576 - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003992 474.0
DYD1_k127_546396_7 spore germination - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006676 355.0
DYD1_k127_546396_8 photosynthesis - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002363 311.0
DYD1_k127_546396_9 Methyltransferase domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000005721 296.0
DYD1_k127_5468672_0 Psort location Cytoplasmic, score - - - 0.00000000000000000000000000000000000000007583 156.0
DYD1_k127_5468672_1 Putative endonuclease, protein of unknown function (DUF1780) - - - 0.000000000000000000000000000000005458 143.0
DYD1_k127_5468672_2 Pyridoxal-phosphate dependent enzyme K01733 - 4.2.3.1 0.000000000000000000000004903 106.0
DYD1_k127_5468672_3 SEC-C motif - - - 0.000000000000002879 90.0
DYD1_k127_5503172_0 C-terminal domain of 1-Cys peroxiredoxin K03386 - 1.11.1.15 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007906 396.0
DYD1_k127_5503172_1 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase K00020 - 1.1.1.31 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001973 392.0
DYD1_k127_5503172_12 PFAM Ammonia monooxygenase particulate methane monooxygenase, subunit C K10946 - - 0.00006045 46.0
DYD1_k127_5503172_2 Alpha/beta hydrolase of unknown function (DUF900) - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001021 388.0
DYD1_k127_5503172_3 SelR domain K07305 - 1.8.4.12 0.00000000000000000000000000000000000000000000000000000000000000000000000004183 250.0
DYD1_k127_5503172_4 IMP dehydrogenase activity K07182 - - 0.000000000000000000000000000000000000000000000000000000000000000000007311 236.0
DYD1_k127_5503172_5 Sulfatase-modifying factor enzyme 1 - - - 0.000000000000000000000000000000000000000000000000000000003489 215.0
DYD1_k127_5503172_6 protein disulfide oxidoreductase activity K03673 - - 0.00000000000000000000000000000000000000000000000000000006113 201.0
DYD1_k127_5503172_7 response regulator - - - 0.000000000004499 72.0
DYD1_k127_5503172_8 glycosyl transferase, family 2 - - - 0.000000003472 57.0
DYD1_k127_550600_0 Evidence 3 Function proposed based on presence of conserved amino acid motif, structural feature or limited homology - - - 0.0 1054.0
DYD1_k127_550600_1 Lysine-2,3-aminomutase K01843 - 5.4.3.2 6.488e-212 663.0
DYD1_k127_550600_10 thiolester hydrolase activity K06889 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001124 369.0
DYD1_k127_550600_11 Belongs to the pirin family K06911 GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005886,GO:0016020,GO:0044424,GO:0044444,GO:0044464,GO:0071944 - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001472 316.0
DYD1_k127_550600_12 Uncharacterized protein conserved in bacteria (DUF2064) K09931 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006446 312.0
DYD1_k127_550600_13 transferase activity, transferring glycosyl groups K20742 - 3.4.14.13 0.000000000000000000000000000000000000000000000000000000000000000000000000001539 262.0
DYD1_k127_550600_14 Evidence 4 Homologs of previously reported genes of K15977 - - 0.00000000000000000000000000000000000000000000000000000000000000000000005231 244.0
DYD1_k127_550600_15 pteridine-dependent deoxygenase K18240 - 4.1.3.40,4.1.3.45 0.0000000000000000000000000000000000000000000000000000002909 210.0
DYD1_k127_550600_18 Glycine-zipper domain - - - 0.00000000000000000000000000000000000000000001993 168.0
DYD1_k127_550600_19 glutathione transferase activity K00799 - 2.5.1.18 0.00000000000000000000000000000000002018 136.0
DYD1_k127_550600_2 elongator protein 3 miab nifb - - - 3.23e-203 649.0
DYD1_k127_550600_21 - - - - 0.00000000000000000000000000000005677 129.0
DYD1_k127_550600_22 polysaccharide deacetylase - - - 0.000000000000000000000003245 115.0
DYD1_k127_550600_23 DUF167 K09131 - - 0.000000000000000000003019 96.0
DYD1_k127_550600_3 2'-deoxycytidine 5'-triphosphate deaminase (DCD) K01494 - 3.5.4.13 2.914e-198 623.0
DYD1_k127_550600_4 - - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000855 596.0
DYD1_k127_550600_5 Associated with various cellular activities K04748 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005908 466.0
DYD1_k127_550600_6 Uncharacterised conserved protein (DUF2156) K01163,K06940 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002647 455.0
DYD1_k127_550600_7 Tryptophan halogenase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005422 448.0
DYD1_k127_550600_8 Trypsin - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000635 423.0
DYD1_k127_550600_9 oxidoreductase activity, acting on CH-OH group of donors K00059 - 1.1.1.100 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001918 399.0
DYD1_k127_5541051_0 Polysaccharide biosynthesis protein CapD - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002077 495.0
DYD1_k127_5541051_1 Glycosyl transferase family 2 K12984 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000751 361.0
DYD1_k127_5541051_2 heptosyltransferase K02849 GO:0000271,GO:0003674,GO:0003824,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005975,GO:0005976,GO:0006629,GO:0008150,GO:0008152,GO:0008610,GO:0008653,GO:0008713,GO:0008920,GO:0009058,GO:0009059,GO:0009103,GO:0009244,GO:0009311,GO:0009312,GO:0009987,GO:0016051,GO:0016740,GO:0016757,GO:0033692,GO:0034637,GO:0034645,GO:0043170,GO:0044237,GO:0044238,GO:0044249,GO:0044255,GO:0044260,GO:0044262,GO:0044264,GO:0044424,GO:0044444,GO:0044464,GO:0046401,GO:0071704,GO:0071967,GO:1901135,GO:1901137,GO:1901576,GO:1903509 - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002297 342.0
DYD1_k127_5541051_3 Glycosyltransferase like family 2 - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002452 304.0
DYD1_k127_5541051_4 O-Antigen ligase K02847 - - 0.00000000000000000000000000000000000000000000003468 185.0
DYD1_k127_5594489_0 Evidence 2a Function of homologous gene experimentally demonstrated in an other organism K00382 - 1.8.1.4 2.689e-209 660.0
DYD1_k127_5594489_1 Catalyzes the attachment of tyrosine to tRNA(Tyr) in a two-step reaction tyrosine is first activated by ATP to form Tyr- AMP and then transferred to the acceptor end of tRNA(Tyr) K01866 - 6.1.1.1 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000267 579.0
DYD1_k127_5594489_2 The glycine cleavage system catalyzes the degradation of glycine. The H protein shuttles the methylamine group of glycine from the P protein to the T protein K02437 - - 0.00000000000000000000000000000000000000000000000000000000000001847 217.0
DYD1_k127_5594489_3 Major role in the synthesis of nucleoside triphosphates other than ATP. The ATP gamma phosphate is transferred to the NDP beta phosphate via a ping-pong mechanism, using a phosphorylated active-site intermediate K00940 - 2.7.4.6 0.00000000000000000000000000000000000000000000000000000003813 197.0
DYD1_k127_5594489_4 protein trimerization K01206,K07114,K07126 - 3.2.1.51 0.000000000000000000000000000001077 137.0
DYD1_k127_5594489_6 photosystem II stabilization K00703,K02237,K02238 - 2.4.1.21 0.000000000000001985 82.0
DYD1_k127_5618601_0 Carbohydrate phosphorylase K00688 - 2.4.1.1 0.0 1140.0
DYD1_k127_5618601_1 UvrD-like helicase C-terminal domain K03657 - 3.6.4.12 0.0 1045.0
DYD1_k127_5618601_11 peptidoglycan binding K03642 - - 0.0000000000000000000000000000000000000000000000000000002082 202.0
DYD1_k127_5618601_13 Toxic component of a toxin-antitoxin (TA) module K07171 - - 0.0000000000000000000000000000000000001213 142.0
DYD1_k127_5618601_14 PFAM SpoVT AbrB K07172,K18842 - - 0.0000000000000000000000000000000008123 132.0
DYD1_k127_5618601_15 Protein of unknown function (DUF1778) - - - 0.00000000000000000000000009198 109.0
DYD1_k127_5618601_16 3-demethylubiquinone-9 3-O-methyltransferase activity K00568 - 2.1.1.222,2.1.1.64 0.0000000000000000000000424 108.0
DYD1_k127_5618601_17 Domain of unknown function (DUF4112) - - - 0.00000000000000000000004491 106.0
DYD1_k127_5618601_18 Protein of unknown function (DUF2283) - - - 0.0000000000000000002031 91.0
DYD1_k127_5618601_19 Domain of unknown function (DUF4258) - - - 0.000000000000000002226 87.0
DYD1_k127_5618601_2 - K01992 - - 6.695e-231 725.0
DYD1_k127_5618601_20 This protein promotes the GTP-dependent binding of aminoacyl-tRNA to the A-site of ribosomes during protein biosynthesis K02358 - - 0.000000000000000003118 84.0
DYD1_k127_5618601_21 Transposase IS200 like - - - 0.0000000000001692 72.0
DYD1_k127_5618601_23 - - - - 0.000007976 48.0
DYD1_k127_5618601_24 - - - - 0.0001126 50.0
DYD1_k127_5618601_26 - - - - 0.0002323 46.0
DYD1_k127_5618601_4 ATPase activity K01990,K09697 - 3.6.3.7 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006654 481.0
DYD1_k127_5618601_5 deoxyhypusine monooxygenase activity - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001821 443.0
DYD1_k127_5618601_6 Evidence 4 Homologs of previously reported genes of - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000837 379.0
DYD1_k127_5618601_7 - K01992 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003386 373.0
DYD1_k127_5618601_9 Acetyltransferase (GNAT) domain - - - 0.0000000000000000000000000000000000000000000000000000000000002185 216.0
DYD1_k127_5648834_0 Putative neutral zinc metallopeptidase K06973 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000003041 261.0
DYD1_k127_5648834_1 - - - - 0.000000000000000000000000000000000000000000000000000000000000000000001834 243.0
DYD1_k127_5648834_2 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily - - - 0.000000000000000000000000000000000000000000000002402 175.0
DYD1_k127_5648834_3 Protein-S-isoprenylcysteine methyltransferase - - - 0.00000000000000000000000000000000000000000006254 165.0
DYD1_k127_5648834_4 PFAM Alcohol dehydrogenase K13979 - - 0.00000000000000000000000000000000000004758 144.0
DYD1_k127_5648834_5 COG0790 FOG TPR repeat, SEL1 subfamily K07126 - - 0.0000000000000000000000000000000000842 138.0
DYD1_k127_5648834_6 light absorption - - - 0.000000000000000000000000000000002035 133.0
DYD1_k127_5648834_7 - - - - 0.000000000000000000000000007517 114.0
DYD1_k127_5648834_9 Transcriptional regulator - - - 0.00000000000000001822 86.0
DYD1_k127_5659863_0 Nodulation protein S (NodS) - - - 0.000000000000000000000000000000000000000000000000000000000000000007888 235.0
DYD1_k127_5659863_1 Metallo-beta-lactamase superfamily - - - 0.00000000000000000000000000000000000000000000000003999 182.0
DYD1_k127_5659863_2 Transglycosylase associated protein - - - 0.00000000000000000000000000000001636 127.0
DYD1_k127_5664312_0 Transposase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002068 400.0
DYD1_k127_5664312_1 Bacterial extracellular solute-binding protein - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000004215 284.0
DYD1_k127_5664312_2 Uncharacterized protein conserved in bacteria (DUF2237) K09966 - - 0.0000000000000000000000000000000000000000001154 162.0
DYD1_k127_5664312_3 Transposase - - - 0.000000000000000000001193 96.0
DYD1_k127_5664312_5 Belongs to the 'phage' integrase family - - - 0.00001502 48.0
DYD1_k127_5686465_0 anaerobic respiration K10535 GO:0003674,GO:0003824,GO:0005575,GO:0005623,GO:0006091,GO:0006807,GO:0008150,GO:0008152,GO:0009061,GO:0009987,GO:0015975,GO:0015980,GO:0016491,GO:0016661,GO:0016663,GO:0019329,GO:0019331,GO:0034641,GO:0042597,GO:0044237,GO:0044281,GO:0044464,GO:0045333,GO:0047991,GO:0055114 1.7.2.6 2.207e-232 727.0
DYD1_k127_5686465_1 PFAM Ammonia monooxygenase particulate methane monooxygenase, subunit B K10945 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001652 536.0
DYD1_k127_5686465_2 oligosaccharyl transferase activity - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003423 398.0
DYD1_k127_5686465_3 PFAM Ammonia monooxygenase particulate methane monooxygenase, subunit A K10944 GO:0003674,GO:0003824,GO:0004497,GO:0008150,GO:0008152,GO:0016491,GO:0055114 1.14.18.3,1.14.99.39 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006588 391.0
DYD1_k127_5686465_4 - - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003237 379.0
DYD1_k127_5686465_5 to Cytochrome c-554 precursor (C554) (Hydroxylamine oxidoreductase-linked cytochrome) pir A59036 cytochrome c554, tetraheme, precursor - Nitrosomonas europaea - GO:0005575,GO:0005623,GO:0042597,GO:0044464 - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003641 332.0
DYD1_k127_5686465_6 MOSC domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000005949 288.0
DYD1_k127_5686465_7 PFAM NapC NirT cytochrome c K02569 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000007328 263.0
DYD1_k127_5686465_8 PFAM Ammonia monooxygenase particulate methane monooxygenase, subunit C K10946 - - 0.00006045 46.0
DYD1_k127_5697271_0 - - - - 0.0000000000000000000000000000000000000000000001105 170.0
DYD1_k127_5697271_1 Belongs to the UPF0337 (CsbD) family - - - 0.000000000000000000000000256 107.0
DYD1_k127_5697271_2 Protein of unknown function (DUF3309) - - - 0.00000000000000000001786 91.0
DYD1_k127_5697271_3 DDE domain K07497 - - 0.00002869 48.0
DYD1_k127_5697271_4 PFAM transposase, mutator K07493 - - 0.0002171 48.0
DYD1_k127_5807271_0 Belongs to the metallo-dependent hydrolases superfamily. DHOase family. Class I DHOase subfamily K01465 - 3.5.2.3 9.038e-233 725.0
DYD1_k127_5807271_1 Carbamoyl-phosphate synthase small chain, CPSase domain K01956 - 6.3.5.5 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007212 586.0
DYD1_k127_5807271_2 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain K00609 - 2.1.3.2 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009224 525.0
DYD1_k127_5807271_3 Peptidase family S49 K04773 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004745 464.0
DYD1_k127_5807271_5 Also displays a weak uracil phosphoribosyltransferase activity which is not physiologically significant K02825 - 2.4.2.9 0.00000000000000000003449 90.0
DYD1_k127_5807271_6 chaperone-mediated protein folding - - - 0.000000000074 65.0
DYD1_k127_5848032_0 Probable RNA and SrmB- binding site of polymerase A K00974 - 2.7.7.72 0.0 1076.0
DYD1_k127_5848032_1 Sugar (and other) transporter K08178 - - 4.27e-209 659.0
DYD1_k127_5848032_2 heat shock protein binding K03686,K05516 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000002198 284.0
DYD1_k127_5848032_3 PFAM Glycosyl transferase family 2 - - - 0.000000000000000000000000000000000000000000000000001859 188.0
DYD1_k127_5848032_4 Protein of unknown function, DUF547 - - - 0.000000000000000000000000000000000000000000000003516 183.0
DYD1_k127_5848032_5 imidazolonepropionase activity - - - 0.00000000000000000000000000000000000000000000009769 171.0
DYD1_k127_5848032_6 radical SAM domain protein K06871 - - 0.0000000000000000000000000000000002556 146.0
DYD1_k127_5848032_7 PFAM Glycosyl transferase family 2 - - - 0.000000000000001015 78.0
DYD1_k127_5853147_0 Belongs to the monovalent cation proton antiporter 2 (CPA2) transporter (TC 2.A.37) family K03455 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007314 596.0
DYD1_k127_5853147_1 Acts as a magnesium transporter K06213 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004447 468.0
DYD1_k127_5853147_2 - - - - 0.0000001514 57.0
DYD1_k127_5939481_0 Belongs to the citrate synthase family K01647,K01659 - 2.3.3.1,2.3.3.5 1.566e-210 658.0
DYD1_k127_5939481_1 Belongs to the small heat shock protein (HSP20) family K13993 - - 0.00000000000000000000000000000000000000000000000000000000000000000004072 234.0
DYD1_k127_5939481_4 Plasmid stabilization system K19092 - - 0.0000000000000000003705 88.0
DYD1_k127_594362_0 His Kinase A (phosphoacceptor) domain - - - 0.0 1486.0
DYD1_k127_594362_1 hydrogen-translocating pyrophosphatase activity K15987 - 3.6.1.1 0.0 1193.0
DYD1_k127_594362_10 phosphorelay signal transduction system - - - 1.164e-206 652.0
DYD1_k127_594362_11 - - - - 4.211e-205 639.0
DYD1_k127_594362_12 Catalyzes the hydrolysis of short-chain aliphatic amides to their K01426,K01455 - 3.5.1.4,3.5.1.49 1.684e-195 612.0
DYD1_k127_594362_13 chaperone-mediated protein complex assembly K00373,K17052 GO:0003674,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006082,GO:0006807,GO:0008150,GO:0008152,GO:0009987,GO:0016043,GO:0016530,GO:0022607,GO:0034622,GO:0042126,GO:0042128,GO:0043436,GO:0043933,GO:0044085,GO:0044237,GO:0044281,GO:0044424,GO:0044464,GO:0051131,GO:0065003,GO:0071704,GO:0071840,GO:0071941,GO:0140104,GO:2001057 - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004667 605.0
DYD1_k127_594362_14 anaphase-promoting complex binding - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001389 602.0
DYD1_k127_594362_15 Major Facilitator Superfamily - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005506 597.0
DYD1_k127_594362_16 Aldo/keto reductase family - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001038 534.0
DYD1_k127_594362_17 Catalyzes the base-exchange of a guanine (G) residue with the queuine precursor 7-aminomethyl-7-deazaguanine (PreQ1) at position 34 (anticodon wobble position) in tRNAs with GU(N) anticodons (tRNA-Asp, -Asn, -His and -Tyr). Catalysis occurs through a double-displacement mechanism. The nucleophile active site attacks the C1' of nucleotide 34 to detach the guanine base from the RNA, forming a covalent enzyme-RNA intermediate. The proton acceptor active site deprotonates the incoming PreQ1, allowing a nucleophilic attack on the C1' of the ribose to form the product. After dissociation, two additional enzymatic reactions on the tRNA convert PreQ1 to queuine (Q), resulting in the hypermodified nucleoside queuosine (7-(((4,5-cis-dihydroxy-2- cyclopenten-1-yl)amino)methyl)-7-deazaguanosine) K00773 GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006139,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0008616,GO:0009058,GO:0009116,GO:0009119,GO:0009163,GO:0009987,GO:0018130,GO:0019438,GO:0034404,GO:0034641,GO:0034654,GO:0042455,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0044283,GO:0044424,GO:0044464,GO:0046116,GO:0046483,GO:0055086,GO:0071704,GO:1901135,GO:1901137,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576,GO:1901657,GO:1901659 2.4.2.29 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001247 540.0
DYD1_k127_594362_18 protein complex oligomerization - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003403 524.0
DYD1_k127_594362_19 Part of the Sec protein translocase complex. Interacts with the SecYEG preprotein conducting channel. SecDF uses the proton motive force (PMF) to complete protein translocation after the ATP-dependent function of SecA K03072,K12257 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008117 532.0
DYD1_k127_594362_2 In eubacteria ppGpp (guanosine 3'-diphosphate 5-' diphosphate) is a mediator of the stringent response that coordinates a variety of cellular activities in response to changes in nutritional abundance K00951 - 2.7.6.5 0.0 1175.0
DYD1_k127_594362_20 Part of the Sec protein translocase complex. Interacts with the SecYEG preprotein conducting channel. SecDF uses the proton motive force (PMF) to complete protein translocation after the ATP-dependent function of SecA K03074 GO:0005575,GO:0005623,GO:0005886,GO:0005887,GO:0006810,GO:0008104,GO:0008150,GO:0015031,GO:0015833,GO:0016020,GO:0016021,GO:0031224,GO:0031226,GO:0033036,GO:0042886,GO:0044425,GO:0044459,GO:0044464,GO:0045184,GO:0051179,GO:0051234,GO:0071702,GO:0071705,GO:0071944 - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002207 482.0
DYD1_k127_594362_21 chaperone-mediated protein complex assembly K00373,K17052 GO:0003674,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006082,GO:0006807,GO:0008150,GO:0008152,GO:0009987,GO:0016043,GO:0016530,GO:0022607,GO:0034622,GO:0042126,GO:0042128,GO:0043436,GO:0043933,GO:0044085,GO:0044237,GO:0044281,GO:0044424,GO:0044464,GO:0051131,GO:0065003,GO:0071704,GO:0071840,GO:0071941,GO:0140104,GO:2001057 - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000041 462.0
DYD1_k127_594362_22 peptidyl-tyrosine sulfation - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007549 454.0
DYD1_k127_594362_24 Catalyzes the reversible oxidation of malate to oxaloacetate K00024 GO:0003674,GO:0003824,GO:0006082,GO:0006091,GO:0006099,GO:0006101,GO:0008150,GO:0008152,GO:0009060,GO:0009987,GO:0015980,GO:0016491,GO:0016614,GO:0016615,GO:0016999,GO:0017144,GO:0019752,GO:0043436,GO:0044237,GO:0044238,GO:0044281,GO:0045333,GO:0055114,GO:0071704,GO:0072350 1.1.1.37 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001254 374.0
DYD1_k127_594362_25 AI-2E family transporter - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007522 334.0
DYD1_k127_594362_26 peroxiredoxin activity - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000311 319.0
DYD1_k127_594362_27 allophanate hydrolase subunit 2 K01457,K01941,K06350 - 3.5.1.54,6.3.4.6 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008383 318.0
DYD1_k127_594362_28 4 iron, 4 sulfur cluster binding K02573 GO:0005575,GO:0005623,GO:0005886,GO:0016020,GO:0044464,GO:0071944 - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000008246 285.0
DYD1_k127_594362_29 NADPH-dependent FMN reductase K03809 - 1.6.5.2 0.00000000000000000000000000000000000000000000000000000000000000000000000000004649 263.0
DYD1_k127_594362_3 radical SAM domain protein - - - 2.433e-320 987.0
DYD1_k127_594362_30 5-oxoprolinase (ATP-hydrolyzing) activity K01457,K06351,K07160 - 3.5.1.54 0.00000000000000000000000000000000000000000000000000000000000000000005254 240.0
DYD1_k127_594362_31 CMP dCMP deaminase, zinc-binding - - - 0.00000000000000000000000000000000000000000000000000000000000000005655 229.0
DYD1_k127_594362_32 Belongs to the UPF0271 (lamB) family K07160 - - 0.000000000000000000000000000000000000000000000000000000000000001692 228.0
DYD1_k127_594362_33 Glycosyltransferase family 9 (heptosyltransferase) - - - 0.00000000000000000000000000000000000000000000000000000000000004296 225.0
DYD1_k127_594362_36 Uncharacterized ACR, COG1430 K09005 - - 0.00000000000000000000000000000000000000000000003736 174.0
DYD1_k127_594362_37 HemY protein K02498 GO:0005575,GO:0005623,GO:0005886,GO:0016020,GO:0044464,GO:0071944 - 0.000000000000000000000000000000000000000000000387 168.0
DYD1_k127_594362_38 Met-10+ like-protein - - - 0.00000000000000000000000000000000000000000003387 169.0
DYD1_k127_594362_4 metalloendopeptidase activity K08602 - - 7.727e-278 865.0
DYD1_k127_594362_41 Preprotein translocase subunit K03210 - - 0.000000000000000000000000000000000000009116 147.0
DYD1_k127_594362_42 Part of the twin-arginine translocation (Tat) system that transports large folded proteins containing a characteristic twin-arginine motif in their signal peptide across membranes. TatA could form the protein-conducting channel of the Tat system K03116 - - 0.0000000000000000000000000005588 116.0
DYD1_k127_594362_45 2 iron, 2 sulfur cluster binding K02192 GO:0003674,GO:0005488,GO:0048037,GO:0051536,GO:0051537,GO:0051540 - 0.000000000000002994 78.0
DYD1_k127_594362_47 GYD domain - - - 0.000000000006114 69.0
DYD1_k127_594362_49 Transfers a GMP moiety from GTP to Mo-molybdopterin (Mo- MPT) cofactor (Moco or molybdenum cofactor) to form Mo- molybdopterin guanine dinucleotide (Mo-MGD) cofactor K03752 - 2.7.7.77 0.00000000009672 64.0
DYD1_k127_594362_5 Arginyl tRNA synthetase N terminal dom K01887 - 6.1.1.19 7.73e-257 803.0
DYD1_k127_594362_50 peroxidase activity K09162 GO:0003674,GO:0003824,GO:0005575,GO:0005623,GO:0008150,GO:0008152,GO:0016491,GO:0016701,GO:0016702,GO:0042597,GO:0044464,GO:0050587,GO:0051213,GO:0055114 1.13.11.49 0.000000002739 59.0
DYD1_k127_594362_52 COG3957 Phosphoketolase - - - 0.00001242 49.0
DYD1_k127_594362_53 CAAX protease self-immunity - - - 0.00001441 56.0
DYD1_k127_594362_55 - - - - 0.0007687 49.0
DYD1_k127_594362_6 DHH family K07462 - - 4.54e-243 762.0
DYD1_k127_594362_7 NHL repeat - - - 5.845e-239 745.0
DYD1_k127_594362_8 denitrification pathway - - - 8.624e-228 712.0
DYD1_k127_594362_9 denitrification pathway - - - 1.233e-212 666.0
DYD1_k127_5982095_0 Conserved carboxylase domain K01960 - 6.4.1.1 0.0 1021.0
DYD1_k127_5982095_1 Biotin carboxylase C-terminal domain K01959 - 6.4.1.1 1.791e-267 827.0
DYD1_k127_5982095_2 oxidoreductase activity, acting on paired donors, with oxidation of a pair of donors resulting in the reduction of molecular oxygen to two molecules of water K00507 - 1.14.19.1 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000333 532.0
DYD1_k127_5982095_3 spore germination - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001624 329.0
DYD1_k127_5982095_4 hydrolase activity, acting on ester bonds K01563 - 3.8.1.5 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000009767 285.0
DYD1_k127_5982095_7 Catalyzes the decarboxylation of four acetate groups of uroporphyrinogen-III to yield coproporphyrinogen-III K01599 GO:0003674,GO:0003824,GO:0004853,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006725,GO:0006778,GO:0006779,GO:0006783,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009987,GO:0016829,GO:0016830,GO:0016831,GO:0018130,GO:0019438,GO:0033013,GO:0033014,GO:0034641,GO:0042168,GO:0042440,GO:0044237,GO:0044249,GO:0044271,GO:0044424,GO:0044444,GO:0044464,GO:0046148,GO:0046483,GO:0051186,GO:0051188,GO:0071704,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576 4.1.1.37 0.0000000000000000000000000000000000000000000000184 171.0
DYD1_k127_5982095_9 Regulatory protein, FmdB family - - - 0.000000000000000000000000001203 115.0
DYD1_k127_599042_0 Conserved region in glutamate synthase K00265 - 1.4.1.13,1.4.1.14 0.0 2736.0
DYD1_k127_599042_1 Glycosyl hydrolase family 57 - - - 0.0 1030.0
DYD1_k127_599042_10 Polynucleotide adenylyltransferase K00974 - 2.7.7.72 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001366 467.0
DYD1_k127_599042_11 PFAM Formylglycine-generating sulfatase enzyme K20333 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001359 440.0
DYD1_k127_599042_12 Nucleotidyl transferase K00966 - 2.7.7.13 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000259 362.0
DYD1_k127_599042_13 Metallo-beta-lactamase superfamily - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003008 347.0
DYD1_k127_599042_15 cysteine-type peptidase activity - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000001624 258.0
DYD1_k127_599042_16 Domain of unknown function (DUF5069) - - - 0.0000000000000000000000000000000000000000000000000000000000000000001884 232.0
DYD1_k127_599042_17 Amino acid kinase family K00926 - 2.7.2.2 0.00000000000000000000000000000000000000000000000000000000007433 207.0
DYD1_k127_599042_18 - - - - 0.000000000000000000000000000000000000000000000000002334 185.0
DYD1_k127_599042_19 PFAM Uncharacterised ACR, COG1259 K08999 - - 0.000000000000000000000000000000000000000000000001214 180.0
DYD1_k127_599042_2 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster K00266 - 1.4.1.13,1.4.1.14 9.662e-279 861.0
DYD1_k127_599042_20 Isochorismatase family - - - 0.000000000000000000000000000000000000001374 147.0
DYD1_k127_599042_21 thiamine diphosphate biosynthetic process K03154 - - 0.0000000000000000000000001204 106.0
DYD1_k127_599042_22 - - - - 0.0000000000000000000000009251 109.0
DYD1_k127_599042_23 PFAM plasmid stabilization system - - - 0.00000000000000000006541 92.0
DYD1_k127_599042_25 Belongs to the 'phage' integrase family - - - 0.0000000003799 61.0
DYD1_k127_599042_26 Isochorismatase family - - - 0.0000000426 57.0
DYD1_k127_599042_3 ATPase activity - - - 4.876e-258 803.0
DYD1_k127_599042_4 phosphorelay signal transduction system - - - 1.262e-212 669.0
DYD1_k127_599042_5 Galactose-1-phosphate uridyl transferase, N-terminal domain K00965 - 2.7.7.12 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005201 593.0
DYD1_k127_599042_6 Function proposed based on presence of conserved amino acid motif, structural feature or limited homology K02056 - 3.6.3.17 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001607 596.0
DYD1_k127_599042_7 Protein of unknown function (DUF1015) - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001439 583.0
DYD1_k127_599042_8 Polyprenyl synthetase K02523 - 2.5.1.90 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001648 527.0
DYD1_k127_599042_9 Phosphotransferase enzyme family K07102 - 2.7.1.221 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001378 493.0
DYD1_k127_6009602_0 COG0601 ABC-type dipeptide oligopeptide nickel transport systems, permease components K02033 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000007257 265.0
DYD1_k127_6009602_1 Binding-protein-dependent transport system inner membrane component K02034 - - 0.000000000000000000000000000000000000000000000000000000000000005459 228.0
DYD1_k127_6009602_2 PFAM Glyoxalase bleomycin resistance protein dioxygenase K07032 - - 0.00000000000000000000000000000005439 129.0
DYD1_k127_6009602_3 ABC-Type Dipeptide Transport System Periplasmic Component K12368 GO:0003674,GO:0005488,GO:0005575,GO:0005623,GO:0006457,GO:0006810,GO:0006857,GO:0008150,GO:0009987,GO:0015833,GO:0020037,GO:0030288,GO:0030313,GO:0031975,GO:0033218,GO:0042277,GO:0042597,GO:0042886,GO:0042938,GO:0044464,GO:0046906,GO:0048037,GO:0051179,GO:0051234,GO:0061077,GO:0071702,GO:0071705,GO:0097159,GO:1901363 - 0.000000000101 70.0
DYD1_k127_604509_0 Rhodopirellula transposase DDE domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001546 411.0
DYD1_k127_6060677_0 PFAM RNA-directed DNA polymerase (Reverse transcriptase) K00986 - 2.7.7.49 2.498e-260 806.0
DYD1_k127_6060677_1 COG0526 Thiol-disulfide isomerase and thioredoxins - - - 0.000004207 49.0
DYD1_k127_6097232_0 epimerase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003535 508.0
DYD1_k127_6097232_1 COG1012 NAD-dependent aldehyde - - - 0.000000000000000000000000000000000000000000000000000000001269 203.0
DYD1_k127_6097232_10 - - - - 0.000000000002787 71.0
DYD1_k127_6097232_11 Domain of unknown function (DUF4263) - - - 0.000000000005452 77.0
DYD1_k127_6097232_12 Uncharacterised protein family (UPF0175) - - - 0.0000000009761 65.0
DYD1_k127_6097232_13 - - - - 0.0000117 50.0
DYD1_k127_6097232_2 PFAM plasmid pRiA4b - - - 0.000000000000000000000000000000000000000000000000002856 190.0
DYD1_k127_6097232_3 Protein of unknown function (DUF2442) - - - 0.000000000000000000000000000000002619 130.0
DYD1_k127_6097232_4 Protein of unknown function (DUF433) - - - 0.000000000000000000000000002066 112.0
DYD1_k127_6097232_5 domain, Protein - - - 0.0000000000000000000000003887 110.0
DYD1_k127_6097232_6 Domain of unknown function (DUF4926) - - - 0.0000000000000000000000664 102.0
DYD1_k127_6097232_7 Domain of unknown function (DUF3368) - - - 0.000000000000000000000825 101.0
DYD1_k127_6097232_8 - - - - 0.000000000000000000001936 100.0
DYD1_k127_6097232_9 TIR domain - - - 0.000000000000003014 84.0
DYD1_k127_6100831_0 A type II topoisomerase that negatively supercoils closed circular double-stranded (ds) DNA in an ATP-dependent manner to modulate DNA topology and maintain chromosomes in an underwound state. Negative supercoiling favors strand separation, and DNA replication, transcription, recombination and repair, all of which involve strand separation. Also able to catalyze the interconversion of other topological isomers of dsDNA rings, including catenanes and knotted rings. Type II topoisomerases break and join 2 DNA strands simultaneously in an ATP-dependent manner K02469 - 5.99.1.3 0.0 1382.0
DYD1_k127_6100831_1 von Willebrand factor (vWF) type A domain K02448 - - 2.258e-320 1009.0
DYD1_k127_6100831_10 Pfam:DUF989 - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002095 361.0
DYD1_k127_6100831_11 hydrolase activity, acting on ester bonds - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001252 314.0
DYD1_k127_6100831_12 GTP cyclohydrolase I K01495 GO:0000166,GO:0001882,GO:0001883,GO:0003674,GO:0003824,GO:0003933,GO:0003934,GO:0005488,GO:0005525,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006066,GO:0006725,GO:0006729,GO:0006732,GO:0006807,GO:0008150,GO:0008152,GO:0008270,GO:0009058,GO:0009108,GO:0009987,GO:0016787,GO:0016810,GO:0016814,GO:0017076,GO:0017144,GO:0018130,GO:0019001,GO:0019238,GO:0019438,GO:0019751,GO:0032549,GO:0032550,GO:0032553,GO:0032555,GO:0032561,GO:0034311,GO:0034312,GO:0034641,GO:0035639,GO:0036094,GO:0042558,GO:0042559,GO:0043167,GO:0043168,GO:0043169,GO:0044237,GO:0044249,GO:0044271,GO:0044281,GO:0044283,GO:0044424,GO:0044464,GO:0046146,GO:0046165,GO:0046173,GO:0046483,GO:0046872,GO:0046914,GO:0051186,GO:0051188,GO:0071704,GO:0097159,GO:0097367,GO:1901265,GO:1901360,GO:1901362,GO:1901363,GO:1901564,GO:1901566,GO:1901576,GO:1901615,GO:1901617 3.5.4.16 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003132 308.0
DYD1_k127_6100831_13 DNA integration - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000001059 310.0
DYD1_k127_6100831_15 the 2 termini fold to resemble tRNA(Ala) and it encodes a tag peptide , a short internal open reading frame. During trans-translation Ala- aminoacylated tmRNA acts like a tRNA, entering the A-site of stalled ribosomes, displacing the stalled mRNA. The ribosome then switches to translate the ORF on the tmRNA K03664 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000003288 267.0
DYD1_k127_6100831_16 ferredoxin-thioredoxin reductase activity K17892 GO:0003674,GO:0003824,GO:0005488,GO:0006091,GO:0008150,GO:0008152,GO:0009055,GO:0009987,GO:0015979,GO:0016491,GO:0016730,GO:0022900,GO:0030385,GO:0044237,GO:0048037,GO:0051536,GO:0051539,GO:0051540,GO:0055114 1.8.7.2 0.000000000000000000000000000000000000000000000000000000000000000000000000007126 253.0
DYD1_k127_6100831_17 - - - - 0.0000000000000000000000000000000000000000000000000000000000000000000007048 239.0
DYD1_k127_6100831_18 Belongs to the HesB IscA family K15724 - - 0.000000000000000000000000000000000000000000000000000000004057 200.0
DYD1_k127_6100831_19 synthase K01737 - 4.1.2.50,4.2.3.12 0.00000000000000000000000000000000000000000000000000000006365 198.0
DYD1_k127_6100831_2 ABC transporter K06158 - - 2.385e-297 922.0
DYD1_k127_6100831_20 Ferredoxin K04755 GO:0003674,GO:0003824,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006091,GO:0006790,GO:0008150,GO:0008152,GO:0009055,GO:0009987,GO:0016043,GO:0016226,GO:0016491,GO:0022607,GO:0022900,GO:0031163,GO:0044085,GO:0044237,GO:0044424,GO:0044444,GO:0044464,GO:0048037,GO:0051186,GO:0051536,GO:0051537,GO:0051540,GO:0055114,GO:0071840 - 0.00000000000000000000000000000000000000000000000001238 183.0
DYD1_k127_6100831_22 Zn-ribbon-containing possibly RNA-binding protein and truncated derivatives - - - 0.00000000000000000000000000000000000000001291 158.0
DYD1_k127_6100831_3 A type II topoisomerase that negatively supercoils closed circular double-stranded (ds) DNA in an ATP-dependent manner to modulate DNA topology and maintain chromosomes in an underwound state. Negative supercoiling favors strand separation, and DNA replication, transcription, recombination and repair, all of which involve strand separation. Also able to catalyze the interconversion of other topological isomers of dsDNA rings, including catenanes and knotted rings. Type II topoisomerases break and join 2 DNA strands simultaneously in an ATP-dependent manner K02470 - 5.99.1.3 1.002e-296 931.0
DYD1_k127_6100831_4 NADH-ubiquinone oxidoreductase-F iron-sulfur binding region K00335 - 1.6.5.3 7.455e-242 751.0
DYD1_k127_6100831_5 it binds specifically double-stranded DNA at a 9 bp consensus (dnaA box) 5'-TTATC CA A CA A-3'. DnaA binds to ATP and to acidic phospholipids K02313 GO:0003674,GO:0003676,GO:0003677,GO:0003688,GO:0003690,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005886,GO:0006139,GO:0006259,GO:0006260,GO:0006261,GO:0006270,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0016020,GO:0034641,GO:0034645,GO:0043170,GO:0043565,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044424,GO:0044464,GO:0046483,GO:0071704,GO:0071944,GO:0090304,GO:0097159,GO:1901360,GO:1901363,GO:1901576,GO:1990837 - 5.513e-228 712.0
DYD1_k127_6100831_6 Plays an important role in the de novo pathway of purine nucleotide biosynthesis. Catalyzes the first committed step in the biosynthesis of AMP from IMP K01939 GO:0003674,GO:0003824,GO:0004019,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006139,GO:0006163,GO:0006164,GO:0006167,GO:0006725,GO:0006753,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009117,GO:0009123,GO:0009124,GO:0009126,GO:0009127,GO:0009150,GO:0009152,GO:0009156,GO:0009161,GO:0009165,GO:0009167,GO:0009168,GO:0009259,GO:0009260,GO:0009987,GO:0016874,GO:0016879,GO:0017144,GO:0018130,GO:0019438,GO:0019637,GO:0019693,GO:0034641,GO:0034654,GO:0044208,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0044424,GO:0044464,GO:0046033,GO:0046040,GO:0046390,GO:0046483,GO:0055086,GO:0071704,GO:0072521,GO:0072522,GO:0090407,GO:1901135,GO:1901137,GO:1901293,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576 6.3.4.4 4.17e-227 709.0
DYD1_k127_6100831_7 Confers DNA tethering and processivity to DNA polymerases and other proteins. Acts as a clamp, forming a ring around DNA (a reaction catalyzed by the clamp-loading complex) which diffuses in an ATP-independent manner freely and bidirectionally along dsDNA. Initially characterized for its ability to contact the catalytic subunit of DNA polymerase III (Pol III), a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria K02338 - 2.7.7.7 4.154e-198 624.0
DYD1_k127_6100831_8 Catalyzes the reversible oxidation of malate to oxaloacetate K00024 - 1.1.1.37 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001059 510.0
DYD1_k127_6100831_9 MgsA AAA+ ATPase C terminal K07478 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002268 460.0
DYD1_k127_6162390_0 Nitroreductase - - - 4.049e-281 875.0
DYD1_k127_6162390_1 amino acid - - - 1.655e-253 789.0
DYD1_k127_6162390_10 Peptidase M15 K02395 - - 0.0000000000000000000000000000000000000000000000000000000000000000005204 234.0
DYD1_k127_6162390_12 Catalyzes the deamination of adenosine to inosine at the wobble position 34 of tRNA(Arg2) K11991 - 3.5.4.33 0.000000000000000000000000000000000000000000000000000001044 196.0
DYD1_k127_6162390_13 phosphorelay signal transduction system K02535 - 3.5.1.108 0.0000000000000000000000000000000000000000000000000003267 186.0
DYD1_k127_6162390_14 phosphate ion binding K02040 - - 0.0000000000000000000000000000000000000000000000000005762 197.0
DYD1_k127_6162390_15 Helix-turn-helix K21498 - - 0.00000000000000000000000000000000000006226 144.0
DYD1_k127_6162390_17 peroxidase activity - - - 0.00000000000000000009973 88.0
DYD1_k127_6162390_2 Arginase family K01480 - 3.5.3.11 7.691e-216 674.0
DYD1_k127_6162390_3 transferase activity, transferring hexosyl groups - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004147 387.0
DYD1_k127_6162390_4 amino acid transport - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004847 341.0
DYD1_k127_6162390_5 peptidyl-tyrosine sulfation - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003233 323.0
DYD1_k127_6162390_6 Anti-sigma-K factor rskA K18682 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004588 321.0
DYD1_k127_6162390_7 - K02450 GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0044424,GO:0044444,GO:0044464 - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000003689 274.0
DYD1_k127_6162390_8 DNA-templated transcription, initiation K03088 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000001985 261.0
DYD1_k127_6164439_0 Carbamoyl-phosphate synthetase large chain, oligomerisation domain K01955 - 6.3.5.5 0.0 1723.0
DYD1_k127_6164439_1 Protein of unknown function, DUF255 K06888 - - 0.0 1594.0
DYD1_k127_6164439_10 Memo-like protein K06990 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001676 599.0
DYD1_k127_6164439_11 NADH-quinone oxidoreductase K00341,K05577 - 1.6.5.3 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001226 585.0
DYD1_k127_6164439_12 - - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004072 569.0
DYD1_k127_6164439_13 L-2-hydroxyglutarate oxidase LhgO K15736 GO:0000166,GO:0003674,GO:0003824,GO:0003973,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005886,GO:0008150,GO:0008152,GO:0016020,GO:0016491,GO:0016614,GO:0016899,GO:0034419,GO:0036094,GO:0043167,GO:0043168,GO:0044424,GO:0044464,GO:0048037,GO:0050660,GO:0050662,GO:0055114,GO:0071944,GO:0097159,GO:1901265,GO:1901363 - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001577 567.0
DYD1_k127_6164439_14 transmembrane transporter activity K03535 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000215 562.0
DYD1_k127_6164439_15 Phosphomethylpyrimidine kinase K03272 - 2.7.1.167,2.7.7.70 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001814 496.0
DYD1_k127_6164439_16 - - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007247 488.0
DYD1_k127_6164439_17 Belongs to the SIS family. GutQ KpsF subfamily K06041 - 5.3.1.13 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007593 476.0
DYD1_k127_6164439_18 Exonuclease involved in the 3' processing of various precursor tRNAs. Initiates hydrolysis at the 3'-terminus of an RNA molecule and releases 5'-mononucleotides K03684 - 3.1.13.5 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002207 477.0
DYD1_k127_6164439_19 DAHP synthetase I family K01627 - 2.5.1.55 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007348 462.0
DYD1_k127_6164439_2 Uncharacterized protein conserved in bacteria (DUF2309) K09822 - - 0.0 1249.0
DYD1_k127_6164439_20 - - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003494 404.0
DYD1_k127_6164439_21 chaperone-mediated protein folding - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000312 394.0
DYD1_k127_6164439_22 - - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003772 370.0
DYD1_k127_6164439_23 Signal peptidase, peptidase S26 K03100 - 3.4.21.89 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002787 367.0
DYD1_k127_6164439_24 short chain amide porin - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002595 351.0
DYD1_k127_6164439_25 General secretion pathway protein F K02455,K02653 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007075 346.0
DYD1_k127_6164439_26 S-adenosyl-l-methionine hydroxide adenosyltransferase K22205 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001842 307.0
DYD1_k127_6164439_27 PPIases accelerate the folding of proteins. It catalyzes the cis-trans isomerization of proline imidic peptide bonds in oligopeptides K03767,K03768 - 5.2.1.8 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000003262 290.0
DYD1_k127_6164439_28 CDP-alcohol phosphatidyltransferase K00995 - 2.7.8.5 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000005626 279.0
DYD1_k127_6164439_29 depolymerase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000007615 275.0
DYD1_k127_6164439_3 xylulokinase activity K00854 - 2.7.1.17 0.0 1063.0
DYD1_k127_6164439_30 heat shock protein binding K05516,K05801,K18481 GO:0003674,GO:0003676,GO:0003677,GO:0005488,GO:0097159,GO:1901363 - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000139 265.0
DYD1_k127_6164439_31 Necessary for efficient RNA polymerase transcription elongation past template-encoded arresting sites. The arresting sites in DNA have the property of trapping a certain fraction of elongating RNA polymerases that pass through, resulting in locked ternary complexes. Cleavage of the nascent transcript by cleavage factors such as GreA or GreB allows the resumption of elongation from the new 3'terminus. GreA releases sequences of 2 to 3 nucleotides K03624 - - 0.0000000000000000000000000000000000000000000000000000000000000000000002431 244.0
DYD1_k127_6164439_32 Activates KDO (a required 8-carbon sugar) for incorporation into bacterial lipopolysaccharide in Gram-negative bacteria K00979 - 2.7.7.38 0.000000000000000000000000000000000000000000000000000000000000000000002452 244.0
DYD1_k127_6164439_33 Catalyzes the transfer of an acyl group from acyl- phosphate (acyl-PO(4)) to glycerol-3-phosphate (G3P) to form lysophosphatidic acid (LPA). This enzyme utilizes acyl-phosphate as fatty acyl donor, but not acyl-CoA or acyl-ACP K08591 - 2.3.1.15 0.00000000000000000000000000000000000000000000000000000000000000000002223 239.0
DYD1_k127_6164439_34 general secretion pathway protein G K02456 - - 0.00000000000000000000000000000000000000000000000004204 185.0
DYD1_k127_6164439_36 Evidence 2b Function of strongly homologous gene K04752 - - 0.0000000000000000000000000000000000000000000000011 176.0
DYD1_k127_6164439_37 phosphohistidine phosphatase, SixA K08296 - - 0.00000000000000000000000000000000000000000003178 167.0
DYD1_k127_6164439_38 arsenate reductase (glutaredoxin) activity K00537 - 1.20.4.1 0.000000000000000000000000000000000000000001325 159.0
DYD1_k127_6164439_39 Diguanylate cyclase - - - 0.000000000000000000000000000000000000000002603 174.0
DYD1_k127_6164439_4 Required for accurate and efficient protein synthesis under certain stress conditions. May act as a fidelity factor of the translation reaction, by catalyzing a one-codon backward translocation of tRNAs on improperly translocated ribosomes. Back- translocation proceeds from a post-translocation (POST) complex to a pre-translocation (PRE) complex, thus giving elongation factor G a second chance to translocate the tRNAs correctly. Binds to ribosomes in a GTP-dependent manner K03596 - - 0.0 1038.0
DYD1_k127_6164439_40 PFAM General secretion pathway protein K K02460 - - 0.0000000000000000000000000000000000005279 151.0
DYD1_k127_6164439_41 - - - - 0.000000000000000000000000000000000001097 142.0
DYD1_k127_6164439_42 peptidyl-tyrosine sulfation K02450 - - 0.0000000000000000000000000000000001994 137.0
DYD1_k127_6164439_43 Domain present in PSD-95, Dlg, and ZO-1/2. K02452 - - 0.0000000000000000161 94.0
DYD1_k127_6164439_44 TIGRFAM type IV pilus assembly protein PilM K02662 - - 0.000000000000001009 91.0
DYD1_k127_6164439_46 Type II secretion system (T2SS), protein M K02462 - - 0.000000000000005121 85.0
DYD1_k127_6164439_48 General secretion pathway protein H K02457 - - 0.00003847 54.0
DYD1_k127_6164439_5 Catalyzes the ATP-dependent amination of UTP to CTP with either L-glutamine or ammonia as the source of nitrogen. Regulates intracellular CTP levels through interactions with the four ribonucleotide triphosphates K01937 - 6.3.4.2 0.0 1020.0
DYD1_k127_6164439_50 Type II secretion system (T2SS), protein J K02459 - - 0.0007787 50.0
DYD1_k127_6164439_6 Malic enzyme, NAD binding domain K00027 - 1.1.1.38 9.099e-243 756.0
DYD1_k127_6164439_7 Catalyzes the transfer of the alpha-amino group from S- adenosyl-L-methionine (SAM) to 7-keto-8-aminopelargonic acid (KAPA) to form 7,8-diaminopelargonic acid (DAPA). It is the only animotransferase known to utilize SAM as an amino donor K00833 - 2.6.1.62 1.087e-228 715.0
DYD1_k127_6164439_8 PFAM Type II secretion system protein E K02454 - - 1.659e-194 622.0
DYD1_k127_6164439_9 - - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007869 607.0
DYD1_k127_6182440_0 The UvrABC repair system catalyzes the recognition and processing of DNA lesions. UvrA is an ATPase and a DNA-binding protein. A damage recognition complex composed of 2 UvrA and 2 UvrB subunits scans DNA for abnormalities. When the presence of a lesion has been verified by UvrB, the UvrA molecules dissociate K03701 - - 0.0 1499.0
DYD1_k127_6182440_1 Rubrerythrin K22405 - 1.6.3.4 0.0 1206.0
DYD1_k127_6182440_10 Belongs to the peptidase M50B family - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001254 497.0
DYD1_k127_6182440_11 phosphoserine phosphatase activity K07315 - 3.1.3.3 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001066 437.0
DYD1_k127_6182440_12 His Kinase A (phosphoacceptor) domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000107 436.0
DYD1_k127_6182440_13 oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, 2-oxoglutarate as one donor, and incorporation of one atom each of oxygen into both donors - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003189 384.0
DYD1_k127_6182440_14 Methyltransferase required for the conversion of demethylmenaquinol (DMKH2) to menaquinol (MKH2) K03183 - 2.1.1.163,2.1.1.201 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003029 353.0
DYD1_k127_6182440_15 Sigma-54 interaction domain K07714 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000008829 302.0
DYD1_k127_6182440_16 Outer membrane lipoprotein carrier protein LolA K03634 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000001117 298.0
DYD1_k127_6182440_18 Glyoxalase-like domain K01759 - 4.4.1.5 0.000000000000000000000000000000000000000000000000000000000000002852 219.0
DYD1_k127_6182440_19 acetyltransferase K22278 - 3.5.1.104 0.000000000000000000000000000000000000000000000000000000000000004397 220.0
DYD1_k127_6182440_2 helicase activity - - - 0.0 1187.0
DYD1_k127_6182440_20 NYN domain - - - 0.0000000000000000000000000000000000000000000000000000000000006657 216.0
DYD1_k127_6182440_21 response regulator - - - 0.00000000000000000000000000000000000000000000000000002291 198.0
DYD1_k127_6182440_22 phosphorelay signal transduction system K02282,K02482,K04757,K20977 - 2.7.11.1,2.7.13.3 0.0000000000000000000000000000000000000000000000000002199 195.0
DYD1_k127_6182440_23 Histidine kinase K03406 - - 0.0000000000000000000000000000000000000000000000000002863 191.0
DYD1_k127_6182440_24 helix_turn_helix, Lux Regulon - - - 0.000000000000000000000000000000000000000000000000000618 191.0
DYD1_k127_6182440_25 cheY-homologous receiver domain - - - 0.00000000000000000000000000000000000000000000001757 183.0
DYD1_k127_6182440_26 UDP-4-amino-4-deoxy-L-arabinose aminotransferase K13010 - 2.6.1.102 0.00000000000000000000000000000000000000000000009769 171.0
DYD1_k127_6182440_27 PFAM IS1 transposase - - - 0.0000000000000000000000000000000000000000000002217 173.0
DYD1_k127_6182440_28 His Kinase A (phosphoacceptor) domain - - - 0.00000000000000000000000000000000000000000001927 181.0
DYD1_k127_6182440_29 Acyl-homoserine-lactone synthase K13060,K13061,K18096,K20248,K20249,K20250 - 2.3.1.184,2.3.1.228,2.3.1.229 0.000000000000000000000000000000000000000001155 167.0
DYD1_k127_6182440_3 Elongator protein 3, MiaB family, Radical SAM - - - 1.119e-310 957.0
DYD1_k127_6182440_30 antisigma factor binding - - - 0.0000000000000000000000000000000000808 138.0
DYD1_k127_6182440_31 Autoinducer binding domain - - - 0.000000000000000000000000000000000388 141.0
DYD1_k127_6182440_32 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase K11527 - 2.7.13.3 0.00000000000000000000000000000001013 145.0
DYD1_k127_6182440_33 23S rRNA-intervening sequence protein K13010 - 2.6.1.102 0.00000000000000000000000000000007229 128.0
DYD1_k127_6182440_34 Domain present in phytochromes and cGMP-specific phosphodiesterases. - - - 0.00000000000000000000000000001804 132.0
DYD1_k127_6182440_35 Histidine kinase K07682 GO:0000166,GO:0000287,GO:0001666,GO:0003032,GO:0003674,GO:0003824,GO:0004672,GO:0004673,GO:0005488,GO:0005509,GO:0005524,GO:0005575,GO:0005618,GO:0005623,GO:0005886,GO:0006464,GO:0006468,GO:0006793,GO:0006796,GO:0006807,GO:0006950,GO:0008144,GO:0008150,GO:0008152,GO:0009593,GO:0009628,GO:0009987,GO:0016020,GO:0016301,GO:0016310,GO:0016740,GO:0016772,GO:0016773,GO:0016775,GO:0017076,GO:0018106,GO:0018193,GO:0018202,GO:0019538,GO:0019825,GO:0019826,GO:0020037,GO:0030312,GO:0030554,GO:0032553,GO:0032555,GO:0032559,GO:0035639,GO:0036094,GO:0036211,GO:0036293,GO:0040007,GO:0042165,GO:0042221,GO:0043167,GO:0043168,GO:0043169,GO:0043170,GO:0043412,GO:0044237,GO:0044238,GO:0044260,GO:0044267,GO:0044464,GO:0046777,GO:0046872,GO:0046906,GO:0048037,GO:0050896,GO:0051606,GO:0051775,GO:0051776,GO:0070025,GO:0070026,GO:0070482,GO:0070483,GO:0071704,GO:0071944,GO:0097159,GO:0097367,GO:0140096,GO:1901265,GO:1901363,GO:1901564 2.7.13.3 0.00000000000000000000000001043 120.0
DYD1_k127_6182440_36 Response regulator, receiver - - - 0.0000000000000000000000002526 110.0
DYD1_k127_6182440_37 response regulator containing a CheY-like receiver domain and a GGDEF domain K02488 GO:0003674,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0042802,GO:0044424,GO:0044464 2.7.7.65 0.000000000000000000006122 100.0
DYD1_k127_6182440_38 Response regulator with CheY-like receiver, AAA-type ATPase, and DNA-binding domains K02490 - - 0.000000000000000002184 91.0
DYD1_k127_6182440_39 Histidine kinase - - - 0.000000003897 69.0
DYD1_k127_6182440_4 The UvrABC repair system catalyzes the recognition and processing of DNA lesions. UvrC both incises the 5' and 3' sides of the lesion. The N-terminal half is responsible for the 3' incision and the C-terminal half is responsible for the 5' incision K03703 - - 3.537e-308 952.0
DYD1_k127_6182440_42 DNA mismatch repair protein MLH3-like K08739 GO:0000003,GO:0000228,GO:0000280,GO:0000793,GO:0000794,GO:0000795,GO:0003674,GO:0003676,GO:0003677,GO:0003697,GO:0003824,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005634,GO:0005694,GO:0005712,GO:0006139,GO:0006259,GO:0006281,GO:0006298,GO:0006310,GO:0006725,GO:0006807,GO:0006950,GO:0006974,GO:0006996,GO:0007049,GO:0007127,GO:0007131,GO:0008150,GO:0008152,GO:0009987,GO:0016043,GO:0016462,GO:0016787,GO:0016817,GO:0016818,GO:0016887,GO:0017111,GO:0022402,GO:0022414,GO:0031974,GO:0031981,GO:0032300,GO:0032991,GO:0033554,GO:0034641,GO:0035825,GO:0043170,GO:0043226,GO:0043227,GO:0043228,GO:0043229,GO:0043231,GO:0043232,GO:0043233,GO:0044237,GO:0044238,GO:0044260,GO:0044422,GO:0044424,GO:0044427,GO:0044428,GO:0044446,GO:0044454,GO:0044464,GO:0046483,GO:0048285,GO:0050896,GO:0051321,GO:0051716,GO:0061982,GO:0070013,GO:0071704,GO:0071840,GO:0090304,GO:0097159,GO:0099086,GO:0140013,GO:1901360,GO:1901363,GO:1903046,GO:1990391 - 0.0001185 49.0
DYD1_k127_6182440_5 Iron-sulfur cluster-binding domain - - - 3.053e-278 858.0
DYD1_k127_6182440_6 Evidence 3 Function proposed based on presence of conserved amino acid motif, structural feature or limited homology - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001615 575.0
DYD1_k127_6182440_7 Ftsk_gamma K03466 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000166 540.0
DYD1_k127_6182440_8 Catalyzes the stereoinversion of LL-2,6- diaminoheptanedioate (L,L-DAP) to meso-diaminoheptanedioate (meso- DAP), a precursor of L-lysine and an essential component of the bacterial peptidoglycan K01778 - 5.1.1.7 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001541 503.0
DYD1_k127_6182440_9 long-chain fatty acid transporting porin activity K06076 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005526 506.0
DYD1_k127_6190232_0 radical SAM domain protein - - - 0.0 1015.0
DYD1_k127_6190232_1 Catalyzes the hydrolysis of UDP-3-O-myristoyl-N- acetylglucosamine to form UDP-3-O-myristoylglucosamine and acetate, the committed step in lipid A biosynthesis K02535 - 3.5.1.108 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001417 433.0
DYD1_k127_6190232_12 transmembrane transport - - - 0.000000001175 63.0
DYD1_k127_6190232_13 - - - - 0.00000002066 61.0
DYD1_k127_6190232_14 metallopeptidase activity K01993,K13408,K16922 - - 0.0000009727 54.0
DYD1_k127_6190232_2 TIGRFAM Polyphosphate nucleotide phosphotransferase, PPK2 K00937 - 2.7.4.1 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001617 418.0
DYD1_k127_6190232_3 ParB-like nuclease domain K03497 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003597 347.0
DYD1_k127_6190232_4 Inositol monophosphatase family K01092 - 3.1.3.25 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005183 330.0
DYD1_k127_6190232_6 Di-haem cytochrome c peroxidase K00428 - 1.11.1.5 0.00000000000000000000000000000000000000000000000000000000000000000000009726 240.0
DYD1_k127_6190232_7 PFAM Formylglycine-generating sulfatase enzyme - - - 0.0000000000000000000000000000000000000000000000000000000000000001721 233.0
DYD1_k127_6190232_8 pterin-4-alpha-carbinolamine dehydratase K01724 GO:0003674,GO:0003824,GO:0006066,GO:0006725,GO:0006729,GO:0006732,GO:0006807,GO:0008124,GO:0008150,GO:0008152,GO:0009058,GO:0009108,GO:0009987,GO:0016829,GO:0016835,GO:0016836,GO:0017144,GO:0018130,GO:0019438,GO:0019751,GO:0034311,GO:0034312,GO:0034641,GO:0042558,GO:0042559,GO:0044237,GO:0044249,GO:0044271,GO:0044281,GO:0044283,GO:0046146,GO:0046165,GO:0046173,GO:0046483,GO:0051186,GO:0051188,GO:0071704,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576,GO:1901615,GO:1901617 4.2.1.96 0.0000000000000000000000000000000000000000000000000000000000000003333 221.0
DYD1_k127_6190232_9 peroxiredoxin activity K00627,K01607 - 2.3.1.12,4.1.1.44 0.00000000000000000000000000000000000000000000000000000009498 197.0
DYD1_k127_6297814_0 Belongs to the glycosyl hydrolase 32 family - - - 0.000003251 53.0
DYD1_k127_6308323_0 Subunit R is required for both nuclease and ATPase activities, but not for modification K01153 - 3.1.21.3 0.0 1062.0
DYD1_k127_6308323_1 HsdM N-terminal domain K03427 - 2.1.1.72 7.25e-271 841.0
DYD1_k127_6308323_2 - - - - 1.046e-204 649.0
DYD1_k127_6308323_3 type I restriction modification DNA specificity domain K01154,K03427 - 2.1.1.72,3.1.21.3 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000405 440.0
DYD1_k127_6308323_4 HNH endonuclease - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001084 359.0
DYD1_k127_6308323_5 MazG nucleotide pyrophosphohydrolase - - - 0.00000000000000000000001001 105.0
DYD1_k127_6308323_6 Cro/C1-type HTH DNA-binding domain - - - 0.000000000000003585 75.0
DYD1_k127_6324608_0 it binds specifically double-stranded DNA at a 9 bp consensus (dnaA box) 5'-TTATC CA A CA A-3'. DnaA binds to ATP and to acidic phospholipids K02313 GO:0003674,GO:0003676,GO:0003677,GO:0003688,GO:0003690,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005886,GO:0006139,GO:0006259,GO:0006260,GO:0006261,GO:0006270,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0016020,GO:0034641,GO:0034645,GO:0043170,GO:0043565,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044424,GO:0044464,GO:0046483,GO:0071704,GO:0071944,GO:0090304,GO:0097159,GO:1901360,GO:1901363,GO:1901576,GO:1990837 - 4.17e-213 669.0
DYD1_k127_6324608_1 Part of a sulfur-relay system required for 2-thiolation of 5-methylaminomethyl-2-thiouridine (mnm(5)s(2)U) at tRNA wobble positions. Accepts sulfur from TusA and transfers it in turn to TusE - - - 0.0000000000000000000000000000000000000000202 154.0
DYD1_k127_6324608_2 Histidyl-tRNA synthetase K01892 - 6.1.1.21 0.0000000000000000000000000000000001629 136.0
DYD1_k127_6340738_0 ethanolamine utilization protein K04019 GO:0006807,GO:0008150,GO:0008152,GO:0009987,GO:0019538,GO:0030091,GO:0043085,GO:0043170,GO:0044093,GO:0044237,GO:0044238,GO:0044260,GO:0044267,GO:0050790,GO:0051339,GO:0051349,GO:0065007,GO:0065009,GO:0071704,GO:1901564 - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000184 480.0
DYD1_k127_6340738_10 oxidized base lesion DNA N-glycosylase activity - - - 0.000001289 52.0
DYD1_k127_6340738_3 Polysaccharide deacetylase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000003263 285.0
DYD1_k127_6340738_4 ABC-type Fe3 transport system permease component K02011 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000002444 296.0
DYD1_k127_6340738_5 Amidohydrolase K07045 - - 0.000000000000000000000000000000005787 143.0
DYD1_k127_6340738_6 - - - - 0.000000000000000000000000006991 111.0
DYD1_k127_6340738_7 PFAM Amidohydrolase 2 - - - 0.0000000000000000001468 91.0
DYD1_k127_6340738_8 endoribonuclease L-PSP K09022 - 3.5.99.10 0.00000000000000001828 87.0
DYD1_k127_6340738_9 COG1840 ABC-type Fe3 transport system, periplasmic component K02012 - - 0.0000000004757 72.0
DYD1_k127_636173_0 Adenylyl cyclase class-3 4 guanylyl cyclase K01768 - 4.6.1.1 0.0000000000000000000000000000000000000000000000000000000000000000151 242.0
DYD1_k127_636173_1 Yqey-like protein K09117 - - 0.00000000000000001663 83.0
DYD1_k127_6373491_0 Dehydratase family K01687 - 4.2.1.9 1.276e-310 957.0
DYD1_k127_6373491_1 Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family K00058 - 1.1.1.399,1.1.1.95 3.626e-271 844.0
DYD1_k127_6373491_10 PP-loop family K21947 - 2.8.1.15 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002097 480.0
DYD1_k127_6373491_11 Lysin motif K08307 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002791 477.0
DYD1_k127_6373491_12 ATP binding to DnaK triggers the release of the substrate protein, thus completing the reaction cycle. Several rounds of ATP-dependent interactions between DnaJ, DnaK and GrpE are required for fully efficient folding. Also involved, together with DnaK and GrpE, in the DNA replication of plasmids through activation of initiation proteins K05516 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002392 444.0
DYD1_k127_6373491_13 Histidyl-tRNA synthetase K02502 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001542 449.0
DYD1_k127_6373491_14 Evidence 4 Homologs of previously reported genes of - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004512 414.0
DYD1_k127_6373491_15 AAA domain, putative AbiEii toxin, Type IV TA system K01990 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000973 351.0
DYD1_k127_6373491_16 cell envelope organization K05807,K08309 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001364 328.0
DYD1_k127_6373491_17 MazG nucleotide pyrophosphohydrolase domain K02499 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007618 329.0
DYD1_k127_6373491_19 - - - - 0.00000000000000000000000000000000000000000000000000000000000000003777 231.0
DYD1_k127_6373491_2 Participates in initiation and elongation during chromosome replication K02314 - 3.6.4.12 1.054e-239 748.0
DYD1_k127_6373491_20 ATP-independent chaperone mediated protein folding - - - 0.00000000000000000000000000000000000000000000000000000000003081 212.0
DYD1_k127_6373491_21 Belongs to the sigma-70 factor family. ECF subfamily K03088 - - 0.00000000000000000000000000000000000000000000000000003379 196.0
DYD1_k127_6373491_22 peptidyl-tyrosine sulfation - - - 0.000000000000000000000000000000000000000000000000002725 194.0
DYD1_k127_6373491_23 Protein of unknown function, DUF417 - - - 0.000000000000000000000000000000000000000000000000005595 190.0
DYD1_k127_6373491_24 Domain of unknown function (DUF1844) - - - 0.0000000000000000000000000000000000006226 147.0
DYD1_k127_6373491_25 peptidase - - - 0.00000000000000000000000000001548 121.0
DYD1_k127_6373491_26 Type IV pilin PilA K02650 GO:0005575,GO:0005623,GO:0009289,GO:0042995,GO:0044464 - 0.0000000000000001861 87.0
DYD1_k127_6373491_27 self proteolysis - - - 0.0000000000000002125 89.0
DYD1_k127_6373491_28 Transmembrane anti-sigma factor - - - 0.000001504 53.0
DYD1_k127_6373491_29 - - - - 0.0003761 47.0
DYD1_k127_6373491_3 Tetratricopeptide repeat - - - 8.895e-228 721.0
DYD1_k127_6373491_4 transcription factor binding K15836 - - 9.67e-207 684.0
DYD1_k127_6373491_5 twitching motility protein K02670 - - 4.251e-205 643.0
DYD1_k127_6373491_6 Evidence 2b Function of strongly homologous gene - - - 8.728e-205 644.0
DYD1_k127_6373491_7 Type II/IV secretion system protein K02669 - - 1.673e-203 636.0
DYD1_k127_6373491_8 alcohol dehydrogenase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006584 522.0
DYD1_k127_6373491_9 Catalyzes the decarboxylative condensation of pimeloyl- acyl-carrier protein and L-alanine to produce 8-amino-7- oxononanoate (AON), acyl-carrier protein , and carbon dioxide K00639,K00652 GO:0003674,GO:0003824,GO:0005488,GO:0005575,GO:0005618,GO:0005623,GO:0005886,GO:0006082,GO:0006732,GO:0006766,GO:0006767,GO:0006768,GO:0006790,GO:0006807,GO:0008144,GO:0008150,GO:0008152,GO:0008710,GO:0009058,GO:0009102,GO:0009108,GO:0009110,GO:0009987,GO:0016020,GO:0016053,GO:0016740,GO:0016746,GO:0016747,GO:0017144,GO:0018130,GO:0019752,GO:0019842,GO:0030170,GO:0030312,GO:0032787,GO:0034641,GO:0036094,GO:0042364,GO:0043167,GO:0043168,GO:0043436,GO:0043603,GO:0043604,GO:0044237,GO:0044249,GO:0044271,GO:0044272,GO:0044281,GO:0044283,GO:0044464,GO:0046394,GO:0046483,GO:0048037,GO:0050662,GO:0051186,GO:0051188,GO:0070279,GO:0071704,GO:0071944,GO:0072330,GO:0097159,GO:1901360,GO:1901362,GO:1901363,GO:1901564,GO:1901566,GO:1901576 2.3.1.29,2.3.1.47 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001579 494.0
DYD1_k127_6390127_1 nitric oxide reductase activity K03809 - 1.6.5.2 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000102 380.0
DYD1_k127_6390127_3 hemerythrin HHE cation binding domain - - - 0.0000000000000000000000000000000000000000000000000000000004308 205.0
DYD1_k127_6390127_5 Protein of unknown function (DUF1284) K09706 - - 0.000000000000000000000000000001453 126.0
DYD1_k127_6390127_6 Cupin 2, conserved barrel domain protein - - - 0.00000000000000000000001809 109.0
DYD1_k127_6410426_0 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain K01652 - 2.2.1.6 0.0 1107.0
DYD1_k127_6410426_1 Belongs to the alpha-IPM synthase homocitrate synthase family K01649 - 2.3.3.13 3.048e-279 864.0
DYD1_k127_6410426_10 PFAM penicillin-binding protein transpeptidase K05515 - 3.4.16.4 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000262 495.0
DYD1_k127_6410426_11 Catalyzes the NADPH-dependent formation of L-aspartate- semialdehyde (L-ASA) by the reductive dephosphorylation of L- aspartyl-4-phosphate K00133 - 1.2.1.11 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009203 469.0
DYD1_k127_6410426_12 metalloendopeptidase activity - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005514 390.0
DYD1_k127_6410426_13 Transfers and isomerizes the ribose moiety from AdoMet to the 7-aminomethyl group of 7-deazaguanine (preQ1-tRNA) to give epoxyqueuosine (oQ-tRNA) K07568 GO:0002097,GO:0002099,GO:0003674,GO:0003824,GO:0006139,GO:0006396,GO:0006399,GO:0006400,GO:0006725,GO:0006807,GO:0008033,GO:0008150,GO:0008152,GO:0008616,GO:0009058,GO:0009116,GO:0009119,GO:0009163,GO:0009451,GO:0009987,GO:0010467,GO:0016070,GO:0016740,GO:0016853,GO:0018130,GO:0019438,GO:0034404,GO:0034470,GO:0034641,GO:0034654,GO:0034660,GO:0042455,GO:0043170,GO:0043412,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0044283,GO:0046116,GO:0046483,GO:0051075,GO:0055086,GO:0071704,GO:0090304,GO:0140098,GO:0140101,GO:1901135,GO:1901137,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576,GO:1901657,GO:1901659 2.4.99.17 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006373 393.0
DYD1_k127_6410426_14 CDP-alcohol phosphatidyltransferase K17103 - 2.7.8.8 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003658 361.0
DYD1_k127_6410426_15 RNA-DNA hybrid ribonuclease activity K03471 GO:0003674,GO:0003824,GO:0004518,GO:0004519,GO:0004521,GO:0004523,GO:0004540,GO:0005575,GO:0005622,GO:0005623,GO:0006139,GO:0006259,GO:0006260,GO:0006261,GO:0006271,GO:0006273,GO:0006281,GO:0006298,GO:0006401,GO:0006725,GO:0006807,GO:0006950,GO:0006974,GO:0008150,GO:0008152,GO:0009056,GO:0009057,GO:0009058,GO:0009059,GO:0009987,GO:0016070,GO:0016787,GO:0016788,GO:0016891,GO:0016893,GO:0019439,GO:0022616,GO:0032299,GO:0032991,GO:0033554,GO:0033567,GO:0034641,GO:0034645,GO:0034655,GO:0043137,GO:0043170,GO:0044237,GO:0044238,GO:0044248,GO:0044249,GO:0044260,GO:0044265,GO:0044270,GO:0044424,GO:0044464,GO:0046483,GO:0046700,GO:0050896,GO:0051716,GO:0071704,GO:0090304,GO:0090305,GO:0090501,GO:0090502,GO:0140098,GO:1901360,GO:1901361,GO:1901575,GO:1901576 3.1.26.4 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002686 333.0
DYD1_k127_6410426_16 Catalyzes the formation of phosphatidylethanolamine (PtdEtn) from phosphatidylserine (PtdSer) K01613 - 4.1.1.65 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006978 319.0
DYD1_k127_6410426_17 shape-determining protein MreC K03570 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006179 319.0
DYD1_k127_6410426_18 SurA N-terminal domain K03770 - 5.2.1.8 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002527 313.0
DYD1_k127_6410426_19 ACT domain K01653 - 2.2.1.6 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001029 306.0
DYD1_k127_6410426_2 RNA polymerase that catalyzes the synthesis of short RNA molecules used as primers for DNA polymerase during DNA replication K02316 - - 1.938e-233 738.0
DYD1_k127_6410426_20 C4-type zinc ribbon domain K07164 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000001417 291.0
DYD1_k127_6410426_21 DNA recombination-mediator protein A K04096 - - 0.0000000000000000000000000000000000000000000000000000000000000000002435 235.0
DYD1_k127_6410426_22 Phosphoribosyl-AMP cyclohydrolase K01496,K11755 - 3.5.4.19,3.6.1.31 0.000000000000000000000000000000000000000000000000000000000000001608 220.0
DYD1_k127_6410426_23 RDD family - - - 0.000000000000000000000000000000000000000000000000000000008389 202.0
DYD1_k127_6410426_24 Scavenger mRNA decapping enzyme C-term binding K02503 - - 0.00000000000000000000000000000000000000000000000636 173.0
DYD1_k127_6410426_25 Cupin 2, conserved barrel domain protein - - - 0.0000000000000000000000000000000000000000004477 160.0
DYD1_k127_6410426_28 Protein of unknown function (DUF2905) - - - 0.00000000000000000001391 94.0
DYD1_k127_6410426_3 Actin K03569 - - 1.277e-204 639.0
DYD1_k127_6410426_4 Involved in the biosynthesis of branched-chain amino acids (BCAA). Catalyzes an alkyl-migration followed by a ketol- acid reduction of (S)-2-acetolactate (S2AL) to yield (R)-2,3- dihydroxy-isovalerate. In the isomerase reaction, S2AL is rearranged via a Mg-dependent methyl migration to produce 3- hydroxy-3-methyl-2-ketobutyrate (HMKB). In the reductase reaction, this 2-ketoacid undergoes a metal-dependent reduction by NADPH to yield (R)-2,3-dihydroxy-isovalerate K00053 - 1.1.1.86 6.794e-202 630.0
DYD1_k127_6410426_5 Peptidoglycan polymerase that is essential for cell wall elongation K05837 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004529 605.0
DYD1_k127_6410426_6 Catalyzes the oxidation of 3-carboxy-2-hydroxy-4- methylpentanoate (3-isopropylmalate) to 3-carboxy-4-methyl-2- oxopentanoate. The product decarboxylates to 4-methyl-2 oxopentanoate K00052 - 1.1.1.85 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000065 593.0
DYD1_k127_6410426_7 Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released K03086 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001687 587.0
DYD1_k127_6410426_8 ribonuclease Rne Rng family K08300,K08301 - 3.1.26.12 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005151 543.0
DYD1_k127_6410426_9 Stage II sporulation protein K06381 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001854 483.0
DYD1_k127_6420315_1 RadC-like JAB domain K03630 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001177 365.0
DYD1_k127_6420315_2 Type I restriction-modification system methyltransferase subunit K03427 - 2.1.1.72 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009248 357.0
DYD1_k127_6420315_3 Type I restriction modification DNA specificity domain K01154 - 3.1.21.3 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005651 357.0
DYD1_k127_6420315_5 Belongs to the helicase family. UvrD subfamily K07465 - - 0.00000000000000000000000000000000000000000000000000004503 200.0
DYD1_k127_6420315_6 Helix-turn-helix domain - - - 0.00000000000000000000000000000001048 130.0
DYD1_k127_6420315_8 Protein of unknown function (DUF433) - - - 0.000000000007042 70.0
DYD1_k127_6441073_0 Polysaccharide biosynthesis C-terminal domain - - - 0.000000000000000000000000000000000000000000000005663 190.0
DYD1_k127_6441073_1 glycogen (starch) synthase activity K00703,K00754 - 2.4.1.21 0.0000000000000000000000000000000000000000147 168.0
DYD1_k127_6441073_3 Glycosyl transferase, family 2 K20444 - - 0.000000000000000000000000005005 123.0
DYD1_k127_6441073_4 Methyltransferase domain K02169 - 2.1.1.197 0.0000000001875 70.0
DYD1_k127_6441073_5 CDP-alcohol phosphatidyltransferase - - - 0.000000001289 69.0
DYD1_k127_6441073_6 trans-aconitate 2-methyltransferase activity K00598,K02169 - 2.1.1.144,2.1.1.197 0.0002972 50.0
DYD1_k127_645146_0 unfolded protein binding K04043 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008993 508.0
DYD1_k127_645146_1 PFAM Tetratricopeptide repeat - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004931 348.0
DYD1_k127_645146_2 protein kinase activity - - - 0.000000000000000000000000000000000000000000006731 175.0
DYD1_k127_645146_4 - - - - 0.00000000000001078 74.0
DYD1_k127_645146_5 Tetratricopeptide repeat - - - 0.0000000001371 74.0
DYD1_k127_645146_6 - - - - 0.0000000004015 66.0
DYD1_k127_6522574_0 C-terminal, D2-small domain, of ClpB protein K03696 - - 0.0 1487.0
DYD1_k127_6522574_1 Catalyzes the oxidation of glucose 6-phosphate to 6- phosphogluconolactone K00036 - 1.1.1.363,1.1.1.49 9.872e-280 868.0
DYD1_k127_6522574_10 Involved in the regulation of the intracellular balance of NAD and NADP, and is a key enzyme in the biosynthesis of NADP. Catalyzes specifically the phosphorylation on 2'-hydroxyl of the adenosine moiety of NAD to yield NADP K00858 - 2.7.1.23 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007624 492.0
DYD1_k127_6522574_11 L-allo-threonine aldolase activity K01620 - 4.1.2.48 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003567 480.0
DYD1_k127_6522574_12 protein kinase activity K12132 - 2.7.11.1 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005824 432.0
DYD1_k127_6522574_13 protein-(glutamine-N5) methyltransferase activity K00543,K16130,K18896,K18897,K21515 - 2.1.1.156,2.1.1.157,2.1.1.209,2.1.1.4 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002479 412.0
DYD1_k127_6522574_14 PHP domain protein K01624,K07053 - 3.1.3.97,4.1.2.13 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005975 395.0
DYD1_k127_6522574_15 Required for the formation of a threonylcarbamoyl group on adenosine at position 37 (t(6)A37) in tRNAs that read codons beginning with adenine. Is involved in the transfer of the threonylcarbamoyl moiety of threonylcarbamoyl-AMP (TC-AMP) to the N6 group of A37, together with TsaE and TsaB. TsaD likely plays a direct catalytic role in this reaction K01409 GO:0000408,GO:0002949,GO:0005575,GO:0005622,GO:0005623,GO:0006139,GO:0006396,GO:0006399,GO:0006400,GO:0006725,GO:0006807,GO:0008033,GO:0008150,GO:0008152,GO:0009451,GO:0009987,GO:0010467,GO:0016070,GO:0032991,GO:0034470,GO:0034641,GO:0034660,GO:0043170,GO:0043412,GO:0044237,GO:0044238,GO:0044424,GO:0044464,GO:0046483,GO:0070525,GO:0071704,GO:0090304,GO:1901360 2.3.1.234 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002674 370.0
DYD1_k127_6522574_16 tRNA (guanine(37)-N(1))-methyltransferase activity K01091,K01633,K15429 - 1.13.11.81,2.1.1.228,3.1.3.18,4.1.2.25,5.1.99.8 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000091 374.0
DYD1_k127_6522574_17 nucleotidyltransferase activity K17882 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002303 347.0
DYD1_k127_6522574_18 Haloacid dehalogenase-like hydrolase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006296 306.0
DYD1_k127_6522574_19 protein serine/threonine phosphatase activity K01090,K20074 - 3.1.3.16 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000143 282.0
DYD1_k127_6522574_2 Involved in the TCA cycle. Catalyzes the stereospecific interconversion of fumarate to L-malate K01679 - 4.2.1.2 2.722e-258 803.0
DYD1_k127_6522574_20 Uncharacterised protein family UPF0047 - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000003363 265.0
DYD1_k127_6522574_21 Glycosyltransferase like family 2 K00721 - 2.4.1.83 0.0000000000000000000000000000000000000000000000000000000000000000000001891 251.0
DYD1_k127_6522574_22 lipolytic protein G-D-S-L family - - - 0.00000000000000000000000000000000000000000000000000000000000000000000865 240.0
DYD1_k127_6522574_23 histone H2A K63-linked ubiquitination - - - 0.00000000000000000000000000000000000000000000000001203 189.0
DYD1_k127_6522574_25 abc-type fe3 -hydroxamate transport system, periplasmic component K02016 - - 0.000000000000000000000000000000000004986 144.0
DYD1_k127_6522574_27 domain, Protein K18491 - - 0.00000000000000007806 88.0
DYD1_k127_6522574_28 abc-type fe3 -hydroxamate transport system, periplasmic component K02016 - - 0.00000000000007507 72.0
DYD1_k127_6522574_29 Glycosyltransferase family 87 K13671 - - 0.000000002457 70.0
DYD1_k127_6522574_3 'glutamate synthase K00528,K03388 - 1.18.1.2,1.19.1.1,1.8.7.3,1.8.98.4,1.8.98.5,1.8.98.6 5.454e-223 699.0
DYD1_k127_6522574_4 Evidence 3 Function proposed based on presence of conserved amino acid motif, structural feature or limited homology - - - 1.05e-205 651.0
DYD1_k127_6522574_5 Catalyzes the reduction of ribonucleotides to deoxyribonucleotides. May function to provide a pool of deoxyribonucleotide precursors for DNA repair during oxygen limitation and or for immediate growth after restoration of oxygen K00525 - 1.17.4.1 1.443e-201 643.0
DYD1_k127_6522574_7 Catalyzes the NADPH-dependent reduction of L-glutamate 5-phosphate into L-glutamate 5-semialdehyde and phosphate. The product spontaneously undergoes cyclization to form 1-pyrroline-5- carboxylate K00147 GO:0003674,GO:0003824,GO:0004350,GO:0008150,GO:0008152,GO:0016491,GO:0016620,GO:0016903,GO:0055114 1.2.1.41 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002133 604.0
DYD1_k127_6522574_8 deoxyhypusine monooxygenase activity - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001192 603.0
DYD1_k127_6522574_9 D-gluconate metabolic process K00033 - 1.1.1.343,1.1.1.44 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001274 512.0
DYD1_k127_6559543_0 PFAM Glycosyl transferases group 1 - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000004723 276.0
DYD1_k127_6559543_1 Glycosyl transferases group 1 - - - 0.000000000000000000000000000000000000000000000000003729 188.0
DYD1_k127_6559543_2 Polysaccharide biosynthesis protein - - - 0.000000000000000000000000000000000000000000000008712 190.0
DYD1_k127_6559543_3 Phosphoribosyl transferase domain K00762 - 2.4.2.10 0.00000000000000000000000000000000000000006598 164.0
DYD1_k127_6559543_4 Methionine biosynthesis protein MetW - - - 0.00000000000000000000000000000001631 138.0
DYD1_k127_6559543_5 Glycosyl transferase, family 2 K20444 - - 0.000000000000000000000000000008597 132.0
DYD1_k127_6559543_7 glycogen (starch) synthase activity K00703,K00754 - 2.4.1.21 0.0000000000000003378 89.0
DYD1_k127_6559543_8 Belongs to the CDP-alcohol phosphatidyltransferase class-I family K07291 - 2.7.8.34 0.000000000364 70.0
DYD1_k127_6559543_9 Glycosyl transferases group 1 - - - 0.000003884 52.0
DYD1_k127_6634425_0 Binding-protein-dependent transport system inner membrane component K02037,K02038 - - 1.395e-208 674.0
DYD1_k127_6634425_1 phosphate transport system permease protein K02038 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001199 554.0
DYD1_k127_6634425_10 Belongs to the ompA family K03640 - - 0.0000000000000000000000000000000000000000000000001042 187.0
DYD1_k127_6634425_13 - - - - 0.00000000000001648 83.0
DYD1_k127_6634425_15 Transposase DDE domain - - - 0.000000000001095 67.0
DYD1_k127_6634425_18 nuclease - - - 0.0000000002574 64.0
DYD1_k127_6634425_2 Phosphate-selective porin O and P - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002035 446.0
DYD1_k127_6634425_3 phosphate ion binding K02040 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002805 433.0
DYD1_k127_6634425_4 tRNA processing K04075,K14058,K21947 GO:0003674,GO:0003824,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006139,GO:0006396,GO:0006399,GO:0006400,GO:0006725,GO:0006807,GO:0008033,GO:0008150,GO:0008152,GO:0009451,GO:0009987,GO:0010467,GO:0016070,GO:0016740,GO:0016782,GO:0016783,GO:0034227,GO:0034470,GO:0034641,GO:0034660,GO:0043170,GO:0043412,GO:0044237,GO:0044238,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0048037,GO:0051536,GO:0051539,GO:0051540,GO:0071704,GO:0090304,GO:1901360 2.8.1.15,6.3.4.19 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000711 428.0
DYD1_k127_6634425_5 4fe-4S ferredoxin, iron-sulfur binding domain protein - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005775 421.0
DYD1_k127_6634425_6 Part of the ABC transporter complex PstSACB involved in phosphate import. Responsible for energy coupling to the transport system K02036 - 3.6.3.27 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000581 379.0
DYD1_k127_6634425_7 Plays a role in the regulation of phosphate uptake K02039 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003442 308.0
DYD1_k127_6634425_8 Has an important function as a repair enzyme for proteins that have been inactivated by oxidation. Catalyzes the reversible oxidation-reduction of methionine sulfoxide in proteins to methionine K07304 - 1.8.4.11 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000001224 286.0
DYD1_k127_6634425_9 Sel1 domain protein repeat-containing protein K07126 - - 0.000000000000000000000000000000000000000000000000000000000000003981 223.0
DYD1_k127_6687610_0 two component, sigma54 specific, transcriptional regulator, Fis family K02481 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008387 409.0
DYD1_k127_6687610_1 Histidine kinase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003447 329.0
DYD1_k127_6687610_2 Glycosyltransferase like family 2 - - - 0.0000000000000000000000000000000000000000000000000000000000000000000007366 246.0
DYD1_k127_6702854_0 Bacterial regulatory protein, Fis family K02584 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000002923 293.0
DYD1_k127_6702854_1 Alcohol dehydrogenase GroES-like domain - - - 0.0000000000000000000000000003566 119.0
DYD1_k127_6702854_2 - - - - 0.00000000003459 68.0
DYD1_k127_6723062_0 - - - - 0.00000000000000000000000000000000000000000000003392 171.0
DYD1_k127_6723062_1 nuclease K16561 - - 0.0000000000000000000000000000000000000004457 155.0
DYD1_k127_6723062_2 NmrA-like family - - - 0.000000000000000000000006821 107.0
DYD1_k127_6723062_4 Kelch repeat-containing protein - - - 0.0000000002275 72.0
DYD1_k127_6726946_0 Protein conserved in bacteria - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001904 494.0
DYD1_k127_6726946_1 PFAM Glycosyl transferase family 2 - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003842 312.0
DYD1_k127_6726946_2 Glycosyltransferase like family 2 - - - 0.00000000000000000000000000000000000000002923 162.0
DYD1_k127_6749273_0 Nitrite and sulphite reductase 4Fe-4S domain K00362,K00392 - 1.7.1.15,1.8.7.1 0.0 1069.0
DYD1_k127_6749273_1 sulfate adenylyltransferase (ATP) activity K00860,K00955,K00956 - 2.7.1.25,2.7.7.4 8.384e-220 687.0
DYD1_k127_6749273_2 sulfate reduction K00390,K00957 - 1.8.4.10,1.8.4.8,2.7.7.4 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003721 506.0
DYD1_k127_6749273_3 Glycosyl transferase family, a/b domain K00766 - 2.4.2.18 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001043 461.0
DYD1_k127_6749273_4 sulfate reduction K00390,K00860 GO:0003674,GO:0003824,GO:0004604,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0008150,GO:0008152,GO:0016491,GO:0016667,GO:0016671,GO:0044424,GO:0044464,GO:0055114 1.8.4.10,1.8.4.8,2.7.1.25 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000272 375.0
DYD1_k127_6758603_0 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster - - - 3.066e-233 735.0
DYD1_k127_6758603_1 Belongs to the carbamoyltransferase HypF family K04656 - - 7.609e-228 730.0
DYD1_k127_6758603_10 hydrogenase expression formation protein HypE K04655 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006723 452.0
DYD1_k127_6758603_11 4Fe-4S dicluster domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003865 411.0
DYD1_k127_6758603_12 mannose-1-phosphate guanylyltransferase activity K00971,K16011 - 2.7.7.13,5.3.1.8 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004034 350.0
DYD1_k127_6758603_13 NADH ubiquinone oxidoreductase, 20 Kd subunit - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001292 320.0
DYD1_k127_6758603_14 Mechanosensitive ion channel K05802 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001416 321.0
DYD1_k127_6758603_15 Iron-sulfur cluster binding domain of dihydroorotate dehydrogenase B - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007477 307.0
DYD1_k127_6758603_16 Protein of unknown function DUF72 - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000008269 297.0
DYD1_k127_6758603_17 Ion channel - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000006197 274.0
DYD1_k127_6758603_18 response regulator K02282 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000002668 258.0
DYD1_k127_6758603_19 response regulator K02282 - - 0.00000000000000000000000000000000000000000000000000000000000000000000002273 249.0
DYD1_k127_6758603_2 Sodium:sulfate symporter transmembrane region - - - 3.601e-221 700.0
DYD1_k127_6758603_20 2-oxoacid acceptor oxidoreductase, gamma subunit, pyruvate 2-ketoisovalerate K00172 - 1.2.7.1 0.00000000000000000000000000000000000000000000000000000000000000002291 233.0
DYD1_k127_6758603_21 Inositol monophosphatase family K01082 - 3.1.3.7 0.0000000000000000000000000000000000000000000000000000000000000002598 229.0
DYD1_k127_6758603_22 sodium:proton antiporter activity K05564,K11105 - - 0.00000000000000000000000000000000000000000000000000000006392 212.0
DYD1_k127_6758603_23 Histidine kinase K07683 - 2.7.13.3 0.0000000000000000000000000000000000000000000000000000264 197.0
DYD1_k127_6758603_24 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) - - - 0.0000000000000000000000000000000000000000000000000000272 210.0
DYD1_k127_6758603_25 Histidine kinase K07683 - 2.7.13.3 0.00000000000000000000000000000000000000001177 174.0
DYD1_k127_6758603_27 phosphate binding protein K02040 - - 0.00000000000000000000000000000009164 135.0
DYD1_k127_6758603_28 response regulator K02282 - - 0.00000000000000000000000007473 112.0
DYD1_k127_6758603_29 Hydrogenase maturation protease - - - 0.000000000000000000000004521 111.0
DYD1_k127_6758603_3 sodium:proton antiporter activity K03316 - - 1.006e-205 647.0
DYD1_k127_6758603_30 PFAM hydrogenase expression formation protein (HUPF HYPC) K04653 - - 0.000000000000000000005958 94.0
DYD1_k127_6758603_31 ribosomal large subunit export from nucleus - - - 0.0000000000000000003959 90.0
DYD1_k127_6758603_32 Belongs to the peptidase M50B family - - - 0.0000000000000009905 84.0
DYD1_k127_6758603_35 gas vesicle protein - - - 0.000001623 52.0
DYD1_k127_6758603_36 Pfam:DUF1049 - - - 0.000002066 54.0
DYD1_k127_6758603_38 His Kinase A (phosphoacceptor) domain - - - 0.00006325 49.0
DYD1_k127_6758603_39 mechanosensitive ion channel K05802 - - 0.0009174 44.0
DYD1_k127_6758603_4 Pyruvate:ferredoxin oxidoreductase core domain II K00169 - 1.2.7.1 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003094 551.0
DYD1_k127_6758603_5 Nickel-dependent hydrogenase K00436 - 1.12.1.2 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002456 530.0
DYD1_k127_6758603_6 hydrogenase expression formation protein K04654 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001776 523.0
DYD1_k127_6758603_7 Putative beta-barrel porin-2, OmpL-like. bbp2 - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005707 518.0
DYD1_k127_6758603_8 transmembrane transport - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001247 525.0
DYD1_k127_6758603_9 oxidoreductase activity, acting on the aldehyde or oxo group of donors, iron-sulfur protein as acceptor K00170 - 1.2.7.1 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001342 492.0
DYD1_k127_6781193_0 Glycine cleavage system P-protein K00281,K00283 - 1.4.4.2 0.0 1504.0
DYD1_k127_6781193_1 Amino acid permease K03294 - - 2.343e-247 770.0
DYD1_k127_6781193_10 Belongs to the acetylglutamate kinase family. ArgB subfamily K00930 - 2.7.2.8 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003514 507.0
DYD1_k127_6781193_11 Glycosyl hydrolase family 3 N terminal domain K01207 - 3.2.1.52 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005386 491.0
DYD1_k127_6781193_12 Presumably involved in the processing and regular turnover of intracellular proteins. Catalyzes the removal of unsubstituted N-terminal amino acids from various peptides K01255 - 3.4.11.1 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002472 471.0
DYD1_k127_6781193_13 Class V aminotransferase K04127 - 5.1.1.17 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002069 458.0
DYD1_k127_6781193_14 peptidyl-tyrosine sulfation - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001485 453.0
DYD1_k127_6781193_15 phosphorelay signal transduction system - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002565 388.0
DYD1_k127_6781193_16 Cleaves peptides in various proteins in a process that requires ATP hydrolysis. Has a chymotrypsin-like activity. Plays a major role in the degradation of misfolded proteins K01358 - 3.4.21.92 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007301 381.0
DYD1_k127_6781193_17 May play a role in DNA repair. It seems to be involved in an RecBC-independent recombinational process of DNA repair. It may act with RecF and RecO K06187 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005259 358.0
DYD1_k127_6781193_18 Peptidase C26 K07010 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007557 351.0
DYD1_k127_6781193_19 Catalyzes the complex heterocyclic radical-mediated conversion of 6-carboxy-5,6,7,8-tetrahydropterin (CPH4) to 7- carboxy-7-deazaguanine (CDG), a step common to the biosynthetic pathways of all 7-deazapurine-containing compounds K10026 - 4.3.99.3 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005175 329.0
DYD1_k127_6781193_2 ATP-dependent specificity component of the Clp protease. It directs the protease to specific substrates. Can perform chaperone functions in the absence of ClpP K03544 GO:0000166,GO:0003674,GO:0003824,GO:0004176,GO:0005488,GO:0005524,GO:0006508,GO:0006807,GO:0008144,GO:0008150,GO:0008152,GO:0008233,GO:0009056,GO:0009057,GO:0009987,GO:0016462,GO:0016787,GO:0016817,GO:0016818,GO:0016887,GO:0017076,GO:0017111,GO:0019538,GO:0030163,GO:0030554,GO:0032553,GO:0032555,GO:0032559,GO:0035639,GO:0036094,GO:0042623,GO:0043167,GO:0043168,GO:0043170,GO:0044238,GO:0051301,GO:0070011,GO:0071704,GO:0097159,GO:0097367,GO:0140096,GO:1901265,GO:1901363,GO:1901564,GO:1901565,GO:1901575 - 2.407e-246 765.0
DYD1_k127_6781193_20 Catalyzes the hydrolysis of 10-formyltetrahydrofolate (formyl-FH4) to formate and tetrahydrofolate (FH4) K01433 - 3.5.1.10 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002461 325.0
DYD1_k127_6781193_21 Bacterial transferase hexapeptide (six repeats) - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000009345 295.0
DYD1_k127_6781193_22 Protease subunit of a proteasome-like degradation complex believed to be a general protein degrading machinery K01419 - 3.4.25.2 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000002499 280.0
DYD1_k127_6781193_23 - - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000008287 270.0
DYD1_k127_6781193_24 protein secretion K03116 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000001779 270.0
DYD1_k127_6781193_26 PilZ domain K02676 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000002595 254.0
DYD1_k127_6781193_27 tyrosine recombinase XerC K03733,K04763 - - 0.0000000000000000000000000000000000000000000000000000000000000000001126 241.0
DYD1_k127_6781193_28 Peptidase family M28 - - - 0.00000000000000000000000000000000000000000000000000000000000000001273 233.0
DYD1_k127_6781193_29 PilZ domain K02676 - - 0.00000000000000000000000000000000000000000000000000000000000000007969 226.0
DYD1_k127_6781193_3 this subunit has chaperone activity. The binding of ATP and its subsequent hydrolysis by HslU are essential for unfolding of protein substrates subsequently hydrolyzed by HslV. HslU recognizes the N-terminal part of its protein substrates and unfolds these before they are guided to HslV for hydrolysis K03667 - - 2.998e-235 734.0
DYD1_k127_6781193_32 Binds to DNA and alters its conformation. May be involved in regulation of gene expression, nucleoid organization and DNA protection K09747 - - 0.000000000000000000000000000000000000000000001335 168.0
DYD1_k127_6781193_33 Prokaryotic dksA/traR C4-type zinc finger K06204 - - 0.00000000000000000000000000000000000000000002462 166.0
DYD1_k127_6781193_34 regulation of translation K03530 - - 0.0000000000000000000000000000000000000000002592 160.0
DYD1_k127_6781193_35 Mo-molybdopterin cofactor metabolic process K03636 - - 0.00000000000000000000000000000000000008811 143.0
DYD1_k127_6781193_39 E-Z type HEAT repeats - - - 0.00000000001108 75.0
DYD1_k127_6781193_4 DNA polymerase III is a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria. This DNA polymerase also exhibits 3' to 5' exonuclease activity K02343 - 2.7.7.7 1.096e-225 715.0
DYD1_k127_6781193_5 Catalyzes the folate-dependent formation of 5-methyl- uridine at position 54 (M-5-U54) in all tRNAs K04094 - 2.1.1.74 2.471e-224 702.0
DYD1_k127_6781193_6 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain - - - 5.935e-219 688.0
DYD1_k127_6781193_7 Catalyzes the methylthiolation of an aspartic acid residue of ribosomal protein S12 K14441 - 2.8.4.4 1.184e-214 674.0
DYD1_k127_6781193_8 Involved in protein export. Acts as a chaperone by maintaining the newly synthesized protein in an open conformation. Functions as a peptidyl-prolyl cis-trans isomerase K03545 GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0044424,GO:0044464 - 4.145e-195 617.0
DYD1_k127_6781193_9 proline dipeptidase activity K01262 - 3.4.11.9 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002661 572.0
DYD1_k127_6793598_0 lipopolysaccharide transport K22110 - - 0.0 1546.0
DYD1_k127_6793598_1 Glycogen debranching enzyme - - - 4.397e-289 903.0
DYD1_k127_6793598_10 pectinesterase activity - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003752 417.0
DYD1_k127_6793598_11 Protein of unknown function (DUF3047) - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005814 354.0
DYD1_k127_6793598_12 COG1215 Glycosyltransferases, probably involved in cell wall biogenesis K00694 - 2.4.1.12 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001782 377.0
DYD1_k127_6793598_13 Sigma-54 interaction domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001864 341.0
DYD1_k127_6793598_14 Pfam SNARE associated Golgi protein - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002729 311.0
DYD1_k127_6793598_15 PFAM Prenyltransferase squalene oxidase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000002786 272.0
DYD1_k127_6793598_16 Catalyzes the phosphorylation of the 3'-hydroxyl group of dephosphocoenzyme A to form coenzyme A K00859 - 2.7.1.24 0.00000000000000000000000000000000000000000000000000000000000000000000000000004859 266.0
DYD1_k127_6793598_17 Type II secretion system (T2SS), protein F K12511 - - 0.0000000000000000000000000000000000000000000000000000000000000000004921 240.0
DYD1_k127_6793598_18 - K11477 - - 0.00000000000000000000000000000000000000000000000000000000000000004009 228.0
DYD1_k127_6793598_19 type II secretion system protein K12510 - - 0.00000000000000000000000000000000000000000000000000000000000000008617 233.0
DYD1_k127_6793598_2 Evidence 2a Function of homologous gene experimentally demonstrated in an other organism K00382 - 1.8.1.4 9.205e-277 857.0
DYD1_k127_6793598_20 Thioredoxin - - - 0.000000000000000000000000000000000000000000000000000000000000006469 232.0
DYD1_k127_6793598_21 SAF K02279 - - 0.000000000000000000000000000000000000000000000000000001102 202.0
DYD1_k127_6793598_22 negative regulation of translational initiation K05554,K14670,K15886 - 2.3.1.235 0.000000000000000000000000000000000000000000000000000005392 198.0
DYD1_k127_6793598_23 Tetratricopeptide repeat - - - 0.000000000000000000000000000000000000000000000000000008799 202.0
DYD1_k127_6793598_24 PFAM TadE family protein - - - 0.0000000000000000000000000000000000000000000000001793 190.0
DYD1_k127_6793598_25 Endonuclease that is involved in the suppression of homologous recombination and may therefore have a key role in the control of bacterial genetic diversity K07456 - - 0.00000000000000000000000000000000000000001814 156.0
DYD1_k127_6793598_26 Acyltransferase family - - - 0.0000000000000000000000000000000000000002477 164.0
DYD1_k127_6793598_27 - K02282 - - 0.00000000000000000000000000000000002445 151.0
DYD1_k127_6793598_28 Pilus formation protein N terminal region K02280 - - 0.00000000000000000000000000000000006085 143.0
DYD1_k127_6793598_3 Type ii secretion system protein e K02283 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005519 574.0
DYD1_k127_6793598_30 COG1670 acetyltransferases, including N-acetylases of ribosomal proteins - - - 0.000000000000000000000000005111 113.0
DYD1_k127_6793598_31 PFAM Peptidase A24A, prepilin type IV K02278 - 3.4.23.43 0.00000000000000000000000002762 114.0
DYD1_k127_6793598_32 PFAM TadE family protein - - - 0.00000000000000000002361 95.0
DYD1_k127_6793598_35 DNA-sulfur modification-associated - - - 0.0000002229 63.0
DYD1_k127_6793598_36 - - - - 0.0000004241 55.0
DYD1_k127_6793598_38 PFAM Flp Fap pilin component K02651 - - 0.00001795 48.0
DYD1_k127_6793598_39 - K01822 - 5.3.3.1 0.00004389 46.0
DYD1_k127_6793598_4 tRNA thio-modification K03151 GO:0000049,GO:0002937,GO:0003674,GO:0003676,GO:0003723,GO:0003824,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006139,GO:0006396,GO:0006399,GO:0006400,GO:0006725,GO:0006766,GO:0006767,GO:0006772,GO:0006790,GO:0006807,GO:0008033,GO:0008150,GO:0008152,GO:0009058,GO:0009110,GO:0009228,GO:0009451,GO:0009987,GO:0010467,GO:0016070,GO:0017144,GO:0018130,GO:0019438,GO:0034227,GO:0034470,GO:0034641,GO:0034660,GO:0042364,GO:0042723,GO:0042724,GO:0043170,GO:0043412,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044272,GO:0044281,GO:0044283,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0071704,GO:0072527,GO:0072528,GO:0090304,GO:0097159,GO:1901360,GO:1901362,GO:1901363,GO:1901564,GO:1901566,GO:1901576 2.8.1.4 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001561 561.0
DYD1_k127_6793598_40 phosphorelay signal transduction system K02481,K07714 - - 0.0003415 46.0
DYD1_k127_6793598_41 peptidyl-tyrosine sulfation - - - 0.0008864 51.0
DYD1_k127_6793598_5 Pyridine nucleotide-disulphide oxidoreductase K00384 - 1.8.1.9 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001612 500.0
DYD1_k127_6793598_6 carboxylic acid catabolic process K19802 GO:0000287,GO:0003674,GO:0003824,GO:0005488,GO:0006518,GO:0006807,GO:0008150,GO:0008152,GO:0009987,GO:0016853,GO:0016854,GO:0016855,GO:0034641,GO:0043167,GO:0043169,GO:0043603,GO:0044237,GO:0046872,GO:0071704,GO:1901564 5.1.1.20 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001703 500.0
DYD1_k127_6793598_7 Pilus formation protein N terminal region K02280 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007609 494.0
DYD1_k127_6793598_8 Domain of unknown function (DUF1730) K18979 - 1.17.99.6 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007374 447.0
DYD1_k127_6793598_9 Domain of unknown function (DUF362) - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000155 424.0
DYD1_k127_6796851_0 Transaldolase is important for the balance of metabolites in the pentose-phosphate pathway K00616 - 2.2.1.2 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003331 376.0
DYD1_k127_6796851_1 Catalyzes the conversion of 4-hydroxy- tetrahydrodipicolinate (HTPA) to tetrahydrodipicolinate K00215 - 1.17.1.8 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001336 346.0
DYD1_k127_6796851_3 monooxygenase activity K00688,K15760,K16157,K16242,K18223,K22353,K22357 GO:0003674,GO:0003824,GO:0004497,GO:0005575,GO:0008150,GO:0008152,GO:0009987,GO:0015049,GO:0015050,GO:0015947,GO:0016491,GO:0016705,GO:0016709,GO:0032991,GO:0043446,GO:0044237,GO:0055114,GO:0071704,GO:1902494 1.14.13.227,1.14.13.236,1.14.13.25,1.14.13.69,2.4.1.1 0.0000000000000000006021 89.0
DYD1_k127_6796851_4 Transcriptional regulator - - - 0.000000000000007875 79.0
DYD1_k127_6796851_5 Has lipid A 3-O-deacylase activity. Hydrolyzes the ester bond at the 3 position of lipid A, a bioactive component of lipopolysaccharide (LPS), thereby releasing the primary fatty acyl moiety K10936,K16079 - - 0.000000005511 66.0
DYD1_k127_6796851_6 HicA toxin of bacterial toxin-antitoxin, - - - 0.00000698 50.0
DYD1_k127_6809202_0 fructose 1,6-bisphosphate 1-phosphatase activity K03841 GO:0003674,GO:0003824,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005975,GO:0005984,GO:0005985,GO:0005986,GO:0005996,GO:0006000,GO:0006002,GO:0006006,GO:0006094,GO:0006793,GO:0006796,GO:0008150,GO:0008152,GO:0009058,GO:0009311,GO:0009312,GO:0009987,GO:0016043,GO:0016051,GO:0016311,GO:0016787,GO:0016788,GO:0016791,GO:0019203,GO:0019318,GO:0019319,GO:0019637,GO:0022607,GO:0030388,GO:0034637,GO:0042132,GO:0042578,GO:0043933,GO:0044085,GO:0044237,GO:0044238,GO:0044249,GO:0044262,GO:0044281,GO:0044283,GO:0044424,GO:0044444,GO:0044464,GO:0046351,GO:0046364,GO:0050308,GO:0051259,GO:0051260,GO:0051262,GO:0051289,GO:0065003,GO:0071704,GO:0071840,GO:1901135,GO:1901576 3.1.3.11 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001471 366.0
DYD1_k127_6809202_1 Glucosamine-6-phosphate isomerases/6-phosphogluconolactonase K01057 - 3.1.1.31 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000383 319.0
DYD1_k127_6809202_2 Glucose-6-phosphate dehydrogenase subunit - - - 0.0000000000000000000000000000000000000000000000000000008312 207.0
DYD1_k127_6809202_3 Catalyzes the oxidation of glucose 6-phosphate to 6- phosphogluconolactone K00036 - 1.1.1.363,1.1.1.49 0.00000000000003502 72.0
DYD1_k127_6833823_0 Leucyl-tRNA synthetase, Domain 2 K01869 - 6.1.1.4 0.0 1445.0
DYD1_k127_6833823_1 Evidence 2a Function of homologous gene experimentally demonstrated in an other organism K06147,K11085 - - 3.933e-279 870.0
DYD1_k127_6833823_10 Part of a heterotetrameric complex that catalyzes the two-step biosynthesis of anthranilate, an intermediate in the biosynthesis of L-tryptophan. In the first step, the glutamine- binding beta subunit (TrpG) of anthranilate synthase (AS) provides the glutamine amidotransferase activity which generates ammonia as a substrate that, along with chorismate, is used in the second step, catalyzed by the large alpha subunit of AS (TrpE) to produce anthranilate. In the absence of TrpG, TrpE can synthesize anthranilate directly from chorismate and high concentrations of ammonia K01665 GO:0000162,GO:0003674,GO:0003824,GO:0004049,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005950,GO:0006082,GO:0006520,GO:0006568,GO:0006576,GO:0006586,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0008483,GO:0008652,GO:0009058,GO:0009072,GO:0009073,GO:0009308,GO:0009309,GO:0009987,GO:0016053,GO:0016740,GO:0016769,GO:0016829,GO:0016830,GO:0016833,GO:0018130,GO:0019438,GO:0019752,GO:0032991,GO:0034641,GO:0042401,GO:0042430,GO:0042435,GO:0043436,GO:0044106,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0044283,GO:0044424,GO:0044444,GO:0044464,GO:0046219,GO:0046394,GO:0046483,GO:0046820,GO:0071704,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576,GO:1901605,GO:1901607,GO:1902494 2.6.1.85 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002152 554.0
DYD1_k127_6833823_11 Evidence 3 Function proposed based on presence of conserved amino acid motif, structural feature or limited homology - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005498 557.0
DYD1_k127_6833823_12 hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in linear amidines K01480 GO:0003674,GO:0003824,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006576,GO:0006595,GO:0006596,GO:0006807,GO:0008150,GO:0008152,GO:0008216,GO:0008295,GO:0009058,GO:0009308,GO:0009309,GO:0009987,GO:0016787,GO:0016810,GO:0016813,GO:0034641,GO:0042401,GO:0044106,GO:0044237,GO:0044249,GO:0044271,GO:0044424,GO:0044464,GO:0071704,GO:0097164,GO:1901564,GO:1901566,GO:1901576 3.5.3.11 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006826 516.0
DYD1_k127_6833823_13 Possible lysine decarboxylase K06966 - 3.2.2.10 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004264 511.0
DYD1_k127_6833823_14 Polysaccharide biosynthesis protein K01784 - 5.1.3.2 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000474 483.0
DYD1_k127_6833823_15 Bidirectionally degrades single-stranded DNA into large acid-insoluble oligonucleotides, which are then degraded further into small acid-soluble oligonucleotides K03601 - 3.1.11.6 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006696 473.0
DYD1_k127_6833823_16 Protein of unknown function (DUF692) - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001839 473.0
DYD1_k127_6833823_17 Catalyzes the synthesis of 5,6-dihydrouridine (D), a modified base found in the D-loop of most tRNAs, via the reduction of the C5-C6 double bond in target uridines K05541 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001733 464.0
DYD1_k127_6833823_18 Catalyzes the ATP-dependent conversion of 5- aminoimidazole ribonucleotide (AIR) and HCO(3)(-) to N5- carboxyaminoimidazole ribonucleotide (N5-CAIR) K01589 - 6.3.4.18 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001057 453.0
DYD1_k127_6833823_19 YmdB-like protein K09769 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000204 438.0
DYD1_k127_6833823_2 FAD binding domain K00278 - 1.4.3.16 4.1e-265 826.0
DYD1_k127_6833823_20 Specifically methylates position 2 of adenine 2503 in 23S rRNA and position 2 of adenine 37 in tRNAs K06941 - 2.1.1.192 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004651 442.0
DYD1_k127_6833823_21 hydrolase activity, acting on ester bonds - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002429 422.0
DYD1_k127_6833823_22 Belongs to the class-IV pyridoxal-phosphate-dependent aminotransferase family K00826,K02619 - 2.6.1.42,4.1.3.38 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005467 421.0
DYD1_k127_6833823_23 it plays a direct role in the translocation of protons across the membrane K02108 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001715 390.0
DYD1_k127_6833823_24 DNA polymerase III, delta subunit K02340 - 2.7.7.7 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007925 383.0
DYD1_k127_6833823_25 tRNA processing K06864,K09121 - 4.99.1.12 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006584 359.0
DYD1_k127_6833823_26 arginine decarboxylase activity K02626 - 4.1.1.19 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002816 354.0
DYD1_k127_6833823_27 Catalyzes the decarboxylation of orotidine 5'- monophosphate (OMP) to uridine 5'-monophosphate (UMP) K01591 - 4.1.1.23 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004027 351.0
DYD1_k127_6833823_28 Rhomboid family - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005515 351.0
DYD1_k127_6833823_29 Belongs to the pseudouridine synthase RsuA family K06178,K06181,K06182 - 5.4.99.20,5.4.99.21,5.4.99.22 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008071 346.0
DYD1_k127_6833823_3 Endoribonuclease that initiates mRNA decay K18682 - - 1.596e-251 785.0
DYD1_k127_6833823_30 Bacterial regulatory helix-turn-helix protein, lysR family K03717 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006532 346.0
DYD1_k127_6833823_31 phosphonoacetaldehyde hydrolase activity K20881 - 3.1.3.5 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006041 337.0
DYD1_k127_6833823_32 Required for disulfide bond formation in some periplasmic proteins. Acts by transferring its disulfide bond to other proteins and is reduced in the process - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000004948 290.0
DYD1_k127_6833823_34 Belongs to the sigma-70 factor family. ECF subfamily K03088 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000008146 286.0
DYD1_k127_6833823_35 Functions in the N-end rule pathway of protein degradation where it conjugates Leu, Phe and, less efficiently, Met from aminoacyl-tRNAs to the N-termini of proteins containing an N-terminal arginine or lysine K00684 - 2.3.2.6 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000001178 285.0
DYD1_k127_6833823_36 FtsJ-like methyltransferase K06442 - 2.1.1.226,2.1.1.227 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000004223 284.0
DYD1_k127_6833823_37 Transglycosylase SLT domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000004401 275.0
DYD1_k127_6833823_38 signal-transduction protein containing cAMP-binding and CBS domains K00031,K14446 - 1.1.1.42,1.3.1.85 0.000000000000000000000000000000000000000000000000000000000000000000000000000002944 269.0
DYD1_k127_6833823_4 Transglycosylase SLT domain K08309 - - 9.506e-238 759.0
DYD1_k127_6833823_40 Component of the F(0) channel, it forms part of the peripheral stalk, linking F(1) to F(0) K02109 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000001198 254.0
DYD1_k127_6833823_41 Catalyzes the conversion of N5-carboxyaminoimidazole ribonucleotide (N5-CAIR) to 4-carboxy-5-aminoimidazole ribonucleotide (CAIR) K01588 - 5.4.99.18 0.000000000000000000000000000000000000000000000000000000000000001444 224.0
DYD1_k127_6833823_43 maF-like protein K03215,K06287 GO:0003674,GO:0003824,GO:0005488,GO:0005515,GO:0005575,GO:0005618,GO:0005623,GO:0016462,GO:0016787,GO:0016817,GO:0016818,GO:0030145,GO:0030312,GO:0036218,GO:0036221,GO:0042802,GO:0043167,GO:0043169,GO:0044464,GO:0046872,GO:0046914,GO:0047429,GO:0071944 2.1.1.190 0.00000000000000000000000000000000000000000000000000000000001178 213.0
DYD1_k127_6833823_44 Rhodanese Homology Domain - - - 0.000000000000000000000000000000000000000000000000005612 183.0
DYD1_k127_6833823_46 F(1)F(0) ATP synthase produces ATP from ADP in the presence of a proton or sodium gradient. F-type ATPases consist of two structural domains, F(1) containing the extramembraneous catalytic core and F(0) containing the membrane proton channel, linked together by a central stalk and a peripheral stalk. During catalysis, ATP synthesis in the catalytic domain of F(1) is coupled via a rotary mechanism of the central stalk subunits to proton translocation K02110 - - 0.0000000000000000000000000000000000008712 140.0
DYD1_k127_6833823_48 function for this protein is to guide the assembly of the membrane sector of the ATPase enzyme complex K02116 - - 0.0000000000000000000000000000000142 128.0
DYD1_k127_6833823_49 Activator of cell division through the inhibition of FtsZ GTPase activity, therefore promoting FtsZ assembly into bundles of protofilaments necessary for the formation of the division Z ring. It is recruited early at mid-cell but it is not essential for cell division K09888 - - 0.0000000000000000000000000000001938 125.0
DYD1_k127_6833823_5 Evidence 3 Function proposed based on presence of conserved amino acid motif, structural feature or limited homology K07263 - - 1.049e-224 703.0
DYD1_k127_6833823_50 exodeoxyribonuclease VII activity K03602 - 3.1.11.6 0.0000000000000000000000000002526 115.0
DYD1_k127_6833823_52 Binds directly to 16S ribosomal RNA K02968 - - 0.0000000000000000000000000005486 115.0
DYD1_k127_6833823_53 AntiSigma factor - - - 0.00000000000000000000000003726 112.0
DYD1_k127_6833823_6 Aldehyde dehydrogenase family - - - 1.561e-212 669.0
DYD1_k127_6833823_7 Evidence 3 Function proposed based on presence of conserved amino acid motif, structural feature or limited homology K07263 - - 9.997e-207 651.0
DYD1_k127_6833823_8 GTPase that plays an essential role in the late steps of ribosome biogenesis K03977 - - 7.863e-197 622.0
DYD1_k127_6833823_9 peptidyl-lysine modification to peptidyl-hypusine K00809 - 2.5.1.46 1.965e-195 613.0
DYD1_k127_6874112_0 Involved in peptidoglycan biosynthesis. Transports lipid-linked peptidoglycan precursors from the inner to the outer leaflet of the cytoplasmic membrane K03980 - - 1.133e-246 772.0
DYD1_k127_6874112_1 amine dehydrogenase activity - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006298 522.0
DYD1_k127_6874112_10 Involved in the cellular defense against the biological effects of O6-methylguanine (O6-MeG) and O4-methylthymine (O4-MeT) in DNA. Repairs the methylated nucleobase in DNA by stoichiometrically transferring the methyl group to a cysteine residue in the enzyme. This is a suicide reaction the enzyme is irreversibly inactivated K00567 - 2.1.1.63 0.0000000000000000000000000000000000000000000000001264 183.0
DYD1_k127_6874112_11 Couples transcription and DNA repair by recognizing RNA polymerase (RNAP) stalled at DNA lesions. Mediates ATP-dependent release of RNAP and its truncated transcript from the DNA, and recruitment of nucleotide excision repair machinery to the damaged site K03723 - - 0.00000000000000000000127 96.0
DYD1_k127_6874112_2 Asparaginase K13051 - 3.4.19.5 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008491 357.0
DYD1_k127_6874112_3 PPIC-type PPIASE domain K03769 - 5.2.1.8 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005104 343.0
DYD1_k127_6874112_4 Peptidoglycan polymerase that catalyzes glycan chain elongation from lipid-linked precursors K03814 - 2.4.1.129 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000166 331.0
DYD1_k127_6874112_5 SurA N-terminal domain K03771 - 5.2.1.8 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003252 334.0
DYD1_k127_6874112_6 - - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001606 309.0
DYD1_k127_6874112_7 rejects L-amino acids rather than detecting D-amino acids in the active site. By recycling D-aminoacyl-tRNA to D-amino acids and free tRNA molecules, this enzyme counteracts the toxicity associated with the formation of D-aminoacyl-tRNA entities in vivo and helps enforce protein L-homochirality K07560 GO:0002161,GO:0003674,GO:0003824,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006139,GO:0006399,GO:0006450,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0009987,GO:0016070,GO:0016787,GO:0016788,GO:0034641,GO:0034660,GO:0043170,GO:0044237,GO:0044238,GO:0044424,GO:0044464,GO:0046483,GO:0051499,GO:0051500,GO:0052689,GO:0065007,GO:0065008,GO:0071704,GO:0090304,GO:0106074,GO:0140098,GO:0140101,GO:1901360 - 0.00000000000000000000000000000000000000000000000000000000004501 207.0
DYD1_k127_6874112_8 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily K06991 - - 0.0000000000000000000000000000000000000000000000000000003935 198.0
DYD1_k127_6874112_9 Necessary for normal cell division and for the maintenance of normal septation K03978 - - 0.00000000000000000000000000000000000000000000000000002576 194.0
DYD1_k127_6920590_0 helicase activity K03579 - 3.6.4.13 8.032e-320 1000.0
DYD1_k127_6920590_1 oxidoreductase activity, acting on the aldehyde or oxo group of donors, disulfide as acceptor K00162,K21417 - 1.2.4.1 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000248 586.0
DYD1_k127_6920590_10 nitric oxide dioxygenase activity K00523 - 1.17.1.1 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004828 302.0
DYD1_k127_6920590_11 PFAM ATP adenylyltransferase K00988 - 2.7.7.53 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000001126 304.0
DYD1_k127_6920590_13 ribonucleoside-diphosphate reductase activity K07735 GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0044424,GO:0044444,GO:0044464 - 0.0000000000000000000000000000000000000000000001607 176.0
DYD1_k127_6920590_14 transferase activity, transferring acyl groups - - - 0.0000000000000000000000000001161 122.0
DYD1_k127_6920590_2 oxidoreductase activity, acting on the aldehyde or oxo group of donors, disulfide as acceptor K00161,K11381 - 1.2.4.1,1.2.4.4 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004075 556.0
DYD1_k127_6920590_3 S-acyltransferase activity K00162,K00627 - 1.2.4.1,2.3.1.12 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004167 557.0
DYD1_k127_6920590_4 Dimerisation domain K21377 - 2.1.1.302 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005066 536.0
DYD1_k127_6920590_5 Integral membrane protein TerC family - GO:0005575,GO:0005623,GO:0005886,GO:0016020,GO:0044464,GO:0071944 - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002808 388.0
DYD1_k127_6920590_6 Membrane transport protein K07088 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001376 376.0
DYD1_k127_6920590_7 oxidoreductase activity K00059 - 1.1.1.100 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001565 352.0
DYD1_k127_6920590_8 signal-transduction protein containing cAMP-binding and CBS domains K02342 - 2.7.7.7 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000286 344.0
DYD1_k127_6920590_9 PFAM band 7 protein - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006215 316.0
DYD1_k127_6982667_0 Is required not only for elongation of protein synthesis but also for the initiation of all mRNA translation through initiator tRNA(fMet) aminoacylation K01874 - 6.1.1.10 1.376e-288 900.0
DYD1_k127_6982667_1 Allows the formation of correctly charged Gln-tRNA(Gln) through the transamidation of misacylated Glu-tRNA(Gln) in organisms which lack glutaminyl-tRNA synthetase. The reaction takes place in the presence of glutamine and ATP through an activated gamma-phospho-Glu-tRNA(Gln) K02433 - 6.3.5.6,6.3.5.7 3.118e-258 802.0
DYD1_k127_6982667_10 Involved in DNA repair and RecF pathway recombination K03584 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001406 328.0
DYD1_k127_6982667_11 Phosphorylation of dTMP to form dTDP in both de novo and salvage pathways of dTTP synthesis K00943 - 2.7.4.9 0.00000000000000000000000000000000000000000000000000000000000000000000000004539 258.0
DYD1_k127_6982667_12 Protein of unknown function (DUF971) - - - 0.0000000000000000000000000000000000000000000000000000000000001275 214.0
DYD1_k127_6982667_13 Catalyzes the pyruvoyl-dependent decarboxylation of aspartate to produce beta-alanine K01579 - 4.1.1.11 0.000000000000000000000000000000000000000000000000000002083 192.0
DYD1_k127_6982667_14 Bacterial protein of unknown function (DUF948) - - - 0.000000000000000000000000000000000000000000000000006295 184.0
DYD1_k127_6982667_16 Domain of unknown function (DUF4258) - - - 0.0000000000000000000000000000000005674 131.0
DYD1_k127_6982667_17 Allows the formation of correctly charged Asn-tRNA(Asn) or Gln-tRNA(Gln) through the transamidation of misacylated Asp- tRNA(Asn) or Glu-tRNA(Gln) in organisms which lack either or both of asparaginyl-tRNA or glutaminyl-tRNA synthetases. The reaction takes place in the presence of glutamine and ATP through an activated phospho-Asp-tRNA(Asn) or phospho-Glu-tRNA(Gln) K02435 - 6.3.5.6,6.3.5.7 0.0000000000000000000000006435 106.0
DYD1_k127_6982667_18 cell cycle K05589 GO:0000003,GO:0000910,GO:0003674,GO:0005488,GO:0005515,GO:0005575,GO:0005623,GO:0005886,GO:0007049,GO:0008150,GO:0009987,GO:0016020,GO:0019954,GO:0022402,GO:0022414,GO:0030428,GO:0032153,GO:0032505,GO:0042802,GO:0043093,GO:0044464,GO:0051301,GO:0071944 - 0.000000000000000000000001635 106.0
DYD1_k127_6982667_19 - - - - 0.00000000000000000003906 91.0
DYD1_k127_6982667_2 Allows the formation of correctly charged Asn-tRNA(Asn) or Gln-tRNA(Gln) through the transamidation of misacylated Asp- tRNA(Asn) or Glu-tRNA(Gln) in organisms which lack either or both of asparaginyl-tRNA or glutaminyl-tRNA synthetases. The reaction takes place in the presence of glutamine and ATP through an activated phospho-Asp-tRNA(Asn) or phospho-Glu-tRNA(Gln) K02434 GO:0003674,GO:0003824,GO:0006082,GO:0006139,GO:0006399,GO:0006520,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0009987,GO:0016070,GO:0016874,GO:0016879,GO:0016884,GO:0019752,GO:0034641,GO:0034660,GO:0043038,GO:0043039,GO:0043170,GO:0043436,GO:0044237,GO:0044238,GO:0044281,GO:0046483,GO:0050567,GO:0070681,GO:0071704,GO:0090304,GO:0140098,GO:0140101,GO:1901360,GO:1901564 6.3.5.6,6.3.5.7 2.069e-248 773.0
DYD1_k127_6982667_20 - - - - 0.0000000000000000007532 89.0
DYD1_k127_6982667_21 YtxH-like protein - - - 0.000000000837 64.0
DYD1_k127_6982667_3 Catalyzes the last two sequential reactions in the de novo biosynthetic pathway for UDP-N-acetylglucosamine (UDP- GlcNAc). The C-terminal domain catalyzes the transfer of acetyl group from acetyl coenzyme A to glucosamine-1-phosphate (GlcN-1-P) to produce N-acetylglucosamine-1-phosphate (GlcNAc-1-P), which is converted into UDP-GlcNAc by the transfer of uridine 5- monophosphate (from uridine 5-triphosphate), a reaction catalyzed by the N-terminal domain K04042 - 2.3.1.157,2.7.7.23 4.409e-241 754.0
DYD1_k127_6982667_4 Catalyzes the reversible conversion of 2- phosphoglycerate into phosphoenolpyruvate. It is essential for the degradation of carbohydrates via glycolysis K01689 - 4.2.1.11 9.293e-237 736.0
DYD1_k127_6982667_5 Catalyzes the first step in hexosamine metabolism, converting fructose-6P into glucosamine-6P using glutamine as a nitrogen source K00820 GO:0003674,GO:0003824,GO:0004360,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006002,GO:0006040,GO:0006047,GO:0006139,GO:0006464,GO:0006486,GO:0006487,GO:0006725,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0008483,GO:0009058,GO:0009059,GO:0009100,GO:0009101,GO:0009225,GO:0009987,GO:0016740,GO:0016769,GO:0019538,GO:0019637,GO:0034641,GO:0034645,GO:0036211,GO:0043170,GO:0043412,GO:0043413,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044281,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0055086,GO:0070085,GO:0070548,GO:0071704,GO:1901135,GO:1901137,GO:1901360,GO:1901564,GO:1901566,GO:1901576 2.6.1.16 9.472e-229 723.0
DYD1_k127_6982667_6 Acts as a magnesium transporter K06213 - - 2.706e-226 709.0
DYD1_k127_6982667_7 An essential GTPase that binds both GDP and GTP, with rapid nucleotide exchange. Plays a role in 16S rRNA processing and 30S ribosomal subunit biogenesis and possibly also in cell cycle regulation and energy metabolism K03595 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009777 430.0
DYD1_k127_6982667_8 DNA polymerase III is a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria. This DNA polymerase also exhibits 3' to 5' exonuclease activity K02341 - 2.7.7.7 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001906 396.0
DYD1_k127_6982667_9 Protein of unknown function (DUF502) - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004225 333.0
DYD1_k127_736819_0 Glycosyl hydrolases family 15 - - - 8.216e-312 964.0
DYD1_k127_736819_1 Belongs to the MIP aquaporin (TC 1.A.8) family K06188 - - 0.0000000000000000000000000000000000000000000000000000000004931 205.0
DYD1_k127_736819_2 transferase activity, transferring acyl groups other than amino-acyl groups - - - 0.00000000000000000000000000000000000000000000001351 183.0
DYD1_k127_736819_3 alcohol dehydrogenase - - - 0.000000000000202 70.0
DYD1_k127_743999_0 6-phosphogluconate dehydrogenase, C-terminal domain K00033 - 1.1.1.343,1.1.1.44 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002242 536.0
DYD1_k127_743999_1 Catalyzes the formation of acetyl phosphate from acetate and ATP. Can also catalyze the reverse reaction K00925 - 2.7.2.1 0.00000000000000000000000000000000000001099 148.0
DYD1_k127_743999_2 OmpA family K03640 - - 0.0000000000000000000000000000006863 127.0
DYD1_k127_743999_3 helix_turn_helix, Lux Regulon - - - 0.0000000000000006732 80.0
DYD1_k127_760524_0 Transposase IS200 like K07491 - - 0.0000000000000000000000000000000000002458 144.0
DYD1_k127_760524_1 TIR domain - - - 0.00000000000000000000000000000000004578 145.0
DYD1_k127_760524_2 - - - - 0.000000000000000000004408 104.0
DYD1_k127_760524_3 Protein of unknown function (DUF4239) - - - 0.000001816 53.0
DYD1_k127_782888_0 thymidylate synthase (FAD) activity K03465 - 2.1.1.148 1.401e-259 807.0
DYD1_k127_782888_1 Histidyl-tRNA synthetase K01892 - 6.1.1.21 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001996 608.0
DYD1_k127_782888_10 F420H(2)-dependent quinone reductase - - - 0.00000000000000000000000000000000004996 139.0
DYD1_k127_782888_11 Part of a sulfur-relay system required for 2-thiolation of 5-methylaminomethyl-2-thiouridine (mnm(5)s(2)U) at tRNA wobble positions. Accepts sulfur from TusA and transfers it in turn to TusE - - - 0.0000000000000000000000000000000003844 133.0
DYD1_k127_782888_12 phosphorelay signal transduction system K02535 - 3.5.1.108 0.000000000000000000000000000000023 130.0
DYD1_k127_782888_13 phosphorelay signal transduction system - - - 0.00000000000000000000000002201 112.0
DYD1_k127_782888_17 PFAM nuclease (SNase domain protein) - - - 0.000000000004931 67.0
DYD1_k127_782888_18 - - - - 0.000000001184 66.0
DYD1_k127_782888_19 nuclease - - - 0.0000007037 50.0
DYD1_k127_782888_20 Carboxymuconolactone decarboxylase family - - - 0.00000182 56.0
DYD1_k127_782888_22 DNA integration - - - 0.00004455 53.0
DYD1_k127_782888_3 Evidence 5 No homology to any previously reported sequences - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001157 445.0
DYD1_k127_782888_4 Metallo-beta-lactamase superfamily K06897 - 2.5.1.105 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004288 362.0
DYD1_k127_782888_6 CHAD - - - 0.00000000000000000000000000000000000000000000001729 190.0
DYD1_k127_782888_8 - - - - 0.000000000000000000000000000000000000009025 151.0
DYD1_k127_782888_9 Protein of unknown function (DUF2490) - - - 0.00000000000000000000000000000000002833 144.0
DYD1_k127_802598_0 May play a key role in the regulation of the intracellular concentration of adenosylhomocysteine K01251 - 3.3.1.1 4.706e-237 736.0
DYD1_k127_802598_1 Catalyzes the formation of S-adenosylmethionine (AdoMet) from methionine and ATP. The overall synthetic reaction is composed of two sequential steps, AdoMet formation and the subsequent tripolyphosphate hydrolysis which occurs prior to release of AdoMet from the enzyme K00789 - 2.5.1.6 6.346e-231 718.0
DYD1_k127_802598_10 Glutathione peroxidase - - - 0.0000000006754 64.0
DYD1_k127_802598_11 Putative cyclase - - - 0.000004785 48.0
DYD1_k127_802598_12 PFAM PilT protein, N-terminal - - - 0.000008304 54.0
DYD1_k127_802598_2 alcohol dehydrogenase K00001,K13953 - 1.1.1.1 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002872 470.0
DYD1_k127_802598_3 PFAM glycosyl transferase family 51 K05366,K21464 - 2.4.1.129,3.4.16.4 0.0000000000000000000000000000000000000000000000000000787 200.0
DYD1_k127_802598_4 peptidyl-tyrosine sulfation - - - 0.000000000000000000000000000000000000000000000001061 176.0
DYD1_k127_802598_5 nuclease activity K06218 - - 0.0000000000000000000000000000002162 124.0
DYD1_k127_802598_8 Penicillin-binding Protein K05366 - 2.4.1.129,3.4.16.4 0.00000000000000009385 89.0
DYD1_k127_816279_0 peroxidase activity K09162 GO:0003674,GO:0003824,GO:0005575,GO:0005623,GO:0008150,GO:0008152,GO:0016491,GO:0016701,GO:0016702,GO:0042597,GO:0044464,GO:0050587,GO:0051213,GO:0055114 1.13.11.49 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001236 314.0
DYD1_k127_816279_1 SAICAR synthetase K01923 GO:0003674,GO:0003824,GO:0004639,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006139,GO:0006163,GO:0006164,GO:0006188,GO:0006189,GO:0006725,GO:0006753,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009117,GO:0009123,GO:0009124,GO:0009126,GO:0009127,GO:0009150,GO:0009152,GO:0009156,GO:0009161,GO:0009165,GO:0009167,GO:0009168,GO:0009259,GO:0009260,GO:0009987,GO:0016874,GO:0016879,GO:0016881,GO:0018130,GO:0019438,GO:0019637,GO:0019693,GO:0034641,GO:0034654,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0044424,GO:0044464,GO:0046040,GO:0046390,GO:0046483,GO:0055086,GO:0071704,GO:0072521,GO:0072522,GO:0090407,GO:1901135,GO:1901137,GO:1901293,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576 6.3.2.6 0.00000000000000000000000000000000000000000000000000000000000000000000000000000002063 269.0
DYD1_k127_816279_2 Belongs to the lyase 1 family. Adenylosuccinate lyase subfamily K01756 - 4.3.2.2 0.000000000000000000000000006803 111.0
DYD1_k127_821903_0 transferase activity, transferring glycosyl groups K13057 - 2.4.1.245 1.902e-201 634.0
DYD1_k127_821903_1 Catalyzes the oxidation of glucose 6-phosphate to 6- phosphogluconolactone K00036 - 1.1.1.363,1.1.1.49 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005726 504.0
DYD1_k127_821903_2 Belongs to the peptidase M50B family - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001075 456.0
DYD1_k127_821903_3 NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient K00333,K13378 - 1.6.5.3 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001156 361.0
DYD1_k127_821903_4 Belongs to the aldehyde dehydrogenase family - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000004167 264.0
DYD1_k127_821903_5 - - - - 0.00000000000000000000000004085 110.0
DYD1_k127_862457_0 radical SAM domain protein - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000002565 301.0
DYD1_k127_862457_1 cellulase activity K18197 - 4.2.2.23 0.0000000000000000000000000000000000000000005959 166.0
DYD1_k127_862457_2 nuclease - - - 0.0000000003617 63.0
DYD1_k127_862457_3 Transposase and inactivated derivatives IS30 family - - - 0.0005061 44.0
DYD1_k127_879272_0 aerobic electron transport chain K00425,K08738 - 1.10.3.14 0.0 1024.0
DYD1_k127_879272_1 aerobic electron transport chain K00425,K08738 - 1.10.3.14 0.0 1020.0
DYD1_k127_879272_10 Cytochrome c K08738 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001233 330.0
DYD1_k127_879272_12 UbiA prenyltransferase family K03179 - 2.5.1.39 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000004396 305.0
DYD1_k127_879272_13 Cytochrome c - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000005216 264.0
DYD1_k127_879272_14 Isochorismatase family - - - 0.000000000000000000000000000000000000000000000000000000000000000002651 227.0
DYD1_k127_879272_15 PFAM blue (type 1) copper domain protein - - - 0.00000000000000000000000000000000000000000000000000000000001022 215.0
DYD1_k127_879272_17 - - - - 0.0000000000000000000000000000000000000000001665 162.0
DYD1_k127_879272_18 PFAM transposase IS116 IS110 IS902 family protein - - - 0.00000000000000000000000000000000000000004863 155.0
DYD1_k127_879272_19 Belongs to the 'phage' integrase family - - - 0.0000000000000000000000000000002757 136.0
DYD1_k127_879272_2 Cytochrome b/b6/petB K00412 - - 9.909e-218 677.0
DYD1_k127_879272_20 Transposase IS200 like - - - 0.000000000000000000000006086 103.0
DYD1_k127_879272_3 Domain of unknown function (DUF3463) - - - 4.077e-206 642.0
DYD1_k127_879272_4 oxidoreductase activity, acting on diphenols and related substances as donors K00240,K03886 - 1.3.5.1,1.3.5.4 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002251 489.0
DYD1_k127_879272_5 Cytochrome c K02305,K07152 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001046 446.0
DYD1_k127_879272_6 Evidence 5 No homology to any previously reported sequences K07126 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001349 436.0
DYD1_k127_879272_7 Cytochrome c - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001258 393.0
DYD1_k127_879272_8 Ethylbenzene dehydrogenase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002014 372.0
DYD1_k127_879272_9 Cytochrome c K17052 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004561 353.0
DYD1_k127_911825_0 Catalyzes an amino-pyrimidine hydrolysis reaction at the C5' of the pyrimidine moiety of thiamine compounds, a reaction that is part of a thiamine salvage pathway K03707 GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0044424,GO:0044444,GO:0044464 3.5.99.2 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001054 361.0
DYD1_k127_911825_1 cysteine-type peptidase activity - - - 0.00000000000000000000000000000000000000000000000000000000007702 211.0
DYD1_k127_911825_2 Alternative locus ID K15383 - - 0.00000000000000000000000949 102.0
DYD1_k127_911825_3 ABC transporter substrate-binding protein K15598 - - 0.0000000000000000000029 99.0
DYD1_k127_911825_4 Protein of unknown function (DUF1232) - - - 0.00000000000000000006103 93.0
DYD1_k127_911825_5 - - - - 0.000000000000006153 83.0
DYD1_k127_911825_6 - - - - 0.000000000000006342 85.0
DYD1_k127_913232_0 Protein of unknown function (DUF1722) - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001005 376.0
DYD1_k127_913232_1 ADP-glyceromanno-heptose 6-epimerase activity K00311 - 1.5.5.1 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000293 348.0
DYD1_k127_913232_10 class I DNA-(apurinic or apyrimidinic site) endonuclease activity K03885,K05522 GO:0003674,GO:0003676,GO:0003677,GO:0003690,GO:0003824,GO:0005488,GO:0006139,GO:0006259,GO:0006281,GO:0006725,GO:0006807,GO:0006950,GO:0006974,GO:0008150,GO:0008152,GO:0009987,GO:0016787,GO:0016798,GO:0016799,GO:0019104,GO:0033554,GO:0034641,GO:0043170,GO:0044237,GO:0044238,GO:0044260,GO:0046483,GO:0050896,GO:0051716,GO:0071704,GO:0090304,GO:0097159,GO:0140097,GO:1901360,GO:1901363 1.6.99.3,4.2.99.18 0.0001546 46.0
DYD1_k127_913232_2 Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released. This sigma factor is the primary sigma factor during exponential growth K03086 - - 0.000000000000000000000000000000000000000000000000000000000000000000000102 248.0
DYD1_k127_913232_3 orotate phosphoribosyltransferase activity K00762 - 2.4.2.10 0.0000000000000000000000000000000000000000000116 169.0
DYD1_k127_913232_4 - - - - 0.00000000000000000000000000000000000001474 149.0
DYD1_k127_913232_5 lactoylglutathione lyase activity - - - 0.000000000000000000000000000000001987 135.0
DYD1_k127_913232_7 Belongs to the cation diffusion facilitator (CDF) transporter (TC 2.A.4) family - - - 0.0000000000000000000001052 101.0
DYD1_k127_913232_9 Belongs to the cysteine synthase cystathionine beta- synthase family K01738,K12339,K21949 - 2.5.1.140,2.5.1.47 0.000003179 53.0
DYD1_k127_951595_0 AcrB/AcrD/AcrF family K07787 - - 0.0 1386.0
DYD1_k127_951595_1 heavy metal translocating P-type ATPase K01533,K17686 - 3.6.3.4,3.6.3.54 2.742e-261 828.0
DYD1_k127_951595_10 His Kinase A (phosphoacceptor) domain K02668,K07709 - 2.7.13.3 0.0000003243 53.0
DYD1_k127_951595_11 Transcriptional regulator, DeoR family K21601 - - 0.0000005895 58.0
DYD1_k127_951595_12 - - - - 0.000008682 53.0
DYD1_k127_951595_2 HlyD family secretion protein K07798,K15727 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006343 366.0
DYD1_k127_951595_3 Outer membrane efflux protein - - - 0.0000000000000000000000000000000000000000000000000000000000000000001875 246.0
DYD1_k127_951595_4 Methyltransferase - - - 0.000000000000000000000000000000000000000000000002248 183.0
DYD1_k127_951595_5 Is involved in NO detoxification in an aerobic process, termed nitric oxide dioxygenase (NOD) reaction that utilizes O(2) and NAD(P)H to convert NO to nitrate, which protects the bacterium from various noxious nitrogen compounds. Therefore, plays a central role in the inducible response to nitrosative stress - - - 0.00000000000000000000000000000000000000002926 158.0
DYD1_k127_951595_7 - - - - 0.00000000000000000000016 99.0
DYD1_k127_951595_8 Domains HisKA, HATPase_c - - - 0.000000001518 66.0
DYD1_k127_951595_9 - - - - 0.00000005122 56.0
DYD1_k127_968307_0 Belongs to the MIP aquaporin (TC 1.A.8) family K06188 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009332 339.0
DYD1_k127_968307_1 COGs COG3485 Protocatechuate 3 4-dioxygenase beta subunit - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000007105 292.0
DYD1_k127_968307_2 Pyridine nucleotide-disulphide oxidoreductase - - - 0.0000000000000000000000000000000000000000000000000000000000000000007208 235.0
DYD1_k127_980330_0 COG3328 Transposase and inactivated derivatives - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005289 406.0
DYD1_k127_980330_1 Outer membrane lipoprotein-sorting protein - - - 0.000000000000000000000000000000000000000000000000000000000000002595 228.0
DYD1_k127_980330_2 MacB-like periplasmic core domain - - - 0.000000000000000000000000000000000000000000000000000000009071 214.0
DYD1_k127_980330_3 FtsX-like permease family - - - 0.00000000000000000000000000000000000000000000000000000361 211.0
DYD1_k127_980330_4 Transposase IS200 like K07491 - - 0.000000000000000000000000000000001095 132.0
DYD1_k127_980330_5 Transposase IS200 like K07491 - - 0.0000000000000000000000000000006603 122.0
DYD1_k127_980330_6 Putative small multi-drug export protein - - - 0.00000000000000000000000003526 113.0
DYD1_k127_980330_7 UPF0365 protein - - - 0.0000000000000000129 83.0
DYD1_k127_980330_8 PFAM Transposase IS200 like K07491 - - 0.00005706 49.0