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Overview

ID MAG00865
Name DYD1_bin.44
Sample SMP0025
Taxonomy
Kingdom Bacteria
Phylum Gemmatimonadota
Class Gemmatimonadetes
Order Gemmatimonadales
Family GWC2-71-9
Genus
Species
Assembly information
Completeness (%) 67.45
Contamination (%) 3.28
GC content (%) 69.0
N50 (bp) 10,920
Genome size (bp) 2,854,358

Location

Module

Module ID Module name Total genes Total steps Contain genes Contain steps Percentage of genes Percentage of steps

Genes2510

Gene name Description KEGG GOs EC E-value Score Sequence
DYD1_k127_1008971_0 Facilitates transcription termination by a mechanism that involves Rho binding to the nascent RNA, activation of Rho's RNA-dependent ATPase activity, and release of the mRNA from the DNA template K03628 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007932 358.0
DYD1_k127_1008971_1 Catalyzes the NADPH-dependent formation of L-aspartate- semialdehyde (L-ASA) by the reductive dephosphorylation of L- aspartyl-4-phosphate K00133,K00134 GO:0000166,GO:0003674,GO:0003824,GO:0004365,GO:0005488,GO:0005575,GO:0005576,GO:0005618,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005886,GO:0008150,GO:0008152,GO:0016020,GO:0016491,GO:0016620,GO:0016903,GO:0030312,GO:0036094,GO:0040007,GO:0043891,GO:0044424,GO:0044444,GO:0044464,GO:0048037,GO:0050662,GO:0051287,GO:0055114,GO:0071944,GO:0097159,GO:1901265,GO:1901363 1.2.1.11,1.2.1.12 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004153 341.0
DYD1_k127_1008971_2 - - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003669 319.0
DYD1_k127_1008971_3 O-methyltransferase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000005784 270.0
DYD1_k127_1008971_4 Belongs to the transferase hexapeptide repeat family K00674 - 2.3.1.117 0.000000000000000000000000000000000000000000000000000000000005899 210.0
DYD1_k127_1044212_0 MacB-like periplasmic core domain K02004 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003281 484.0
DYD1_k127_1044212_1 MacB-like periplasmic core domain K02004 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003439 459.0
DYD1_k127_1044212_10 GlcNAc-PI de-N-acetylase K01463 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000005416 293.0
DYD1_k127_1044212_11 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000001901 319.0
DYD1_k127_1044212_12 creatininase K01470,K22232 - 3.5.2.10 0.000000000000000000000000000000000000000000000000000000000000000000000001254 258.0
DYD1_k127_1044212_13 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000378 251.0
DYD1_k127_1044212_14 Outer membrane efflux protein K12340 - - 0.00000000000000000000000000000000000000000000000000000000000000000000002643 265.0
DYD1_k127_1044212_15 PFAM Binding-protein-dependent transport system inner membrane component K05846 - - 0.0000000000000000000000000000000000000000000000000000000000000000000584 239.0
DYD1_k127_1044212_16 OsmC-like protein K06889,K07397 - - 0.0000000000000000000000000000000000000000000000000000000000000322 224.0
DYD1_k127_1044212_17 ATPases associated with a variety of cellular activities K05847 - - 0.00000000000000000000000000000000000000000002858 164.0
DYD1_k127_1044212_18 OsmC-like protein K06889,K07397 - - 0.00000000000000000000000000000000009584 138.0
DYD1_k127_1044212_19 HmuY protein - - - 0.00000046 61.0
DYD1_k127_1044212_2 Catalyzes the 2-thiolation of uridine at the wobble position (U34) of tRNA, leading to the formation of s(2)U34 K00566 - 2.8.1.13 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000227 456.0
DYD1_k127_1044212_3 Oxidoreductase molybdopterin binding domain K07147 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006606 412.0
DYD1_k127_1044212_4 MacB-like periplasmic core domain K02004 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003003 386.0
DYD1_k127_1044212_5 MacB-like periplasmic core domain K02004 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001144 381.0
DYD1_k127_1044212_6 Biotin-lipoyl like K02005 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004629 363.0
DYD1_k127_1044212_7 Aminotransferase class-V K04487 - 2.8.1.7 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004272 346.0
DYD1_k127_1044212_8 membrane, and an ATP-binding domain (NBD), which is responsible for energy generation. Confers resistance against macrolides K02003 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002967 337.0
DYD1_k127_1044212_9 PFAM Substrate binding domain of ABC-type glycine betaine transport system K05845,K05846 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000001357 316.0
DYD1_k127_1098823_0 histidine kinase A domain protein - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001005 362.0
DYD1_k127_1098823_1 Domain of unknown function (DUF4287) - - - 0.00004741 51.0
DYD1_k127_1123637_0 serine-type peptidase activity K01303 - 3.4.19.1 1.353e-262 823.0
DYD1_k127_1123637_1 Enoyl-(Acyl carrier protein) reductase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000004085 301.0
DYD1_k127_1123637_10 alpha/beta hydrolase fold - - - 0.000000000000000000009441 101.0
DYD1_k127_1123637_11 Protein of unknown function (DUF402) K07586 - - 0.00000000000271 74.0
DYD1_k127_1123637_2 Sodium hydrogen exchanger K11105 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000001407 286.0
DYD1_k127_1123637_3 Beta-lactamase class A K17836 - 3.5.2.6 0.00000000000000000000000000000000000000000000000000000000000000000000000005318 261.0
DYD1_k127_1123637_4 Sodium:dicarboxylate symporter family - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000001582 263.0
DYD1_k127_1123637_5 LytTr DNA-binding domain K02477 - - 0.000000000000000000000000000000000000000000000000000000000000000002001 235.0
DYD1_k127_1123637_6 Histidine kinase K08082 - 2.7.13.3 0.000000000000000000000000000000000000000000000000000000000000002586 231.0
DYD1_k127_1123637_7 Catalyzes the activation of phenylacetic acid (PA) to phenylacetyl-CoA (PA-CoA) K01912 - 6.2.1.30 0.00000000000000000000000000000000000000000000000000000000000001178 223.0
DYD1_k127_1123637_8 Putative lumazine-binding - - - 0.00000000000000000000000000000000000008725 151.0
DYD1_k127_1123637_9 Murein-degrading enzyme that degrades murein glycan strands and insoluble, high-molecular weight murein sacculi, with the concomitant formation of a 1,6-anhydromuramoyl product. Lytic transglycosylases (LTs) play an integral role in the metabolism of the peptidoglycan (PG) sacculus. Their lytic action creates space within the PG sacculus to allow for its expansion as well as for the insertion of various structures such as secretion systems and flagella K18691 GO:0005575,GO:0005623,GO:0009279,GO:0016020,GO:0019867,GO:0030312,GO:0030313,GO:0031975,GO:0044462,GO:0044464,GO:0071944 - 0.000000000000000000006246 104.0
DYD1_k127_1155768_0 Heat shock 70 kDa protein K04043 - - 5.306e-321 996.0
DYD1_k127_1155768_1 Cytochrome c oxidase is the component of the respiratory chain that catalyzes the reduction of oxygen to water. Subunits 1- 3 form the functional core of the enzyme complex. CO I is the catalytic subunit of the enzyme. Electrons originating in cytochrome c are transferred via the copper A center of subunit 2 and heme A of subunit 1 to the bimetallic center formed by heme A3 and copper B K02274 - 1.9.3.1 5.932e-213 676.0
DYD1_k127_1155768_10 Rhomboid family - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000001267 273.0
DYD1_k127_1155768_11 Converts heme B (protoheme IX) to heme O by substitution of the vinyl group on carbon 2 of heme B porphyrin ring with a hydroxyethyl farnesyl side group K02257 GO:0003674,GO:0003824,GO:0004311,GO:0004659,GO:0005575,GO:0005623,GO:0005886,GO:0006091,GO:0006725,GO:0006778,GO:0006779,GO:0006783,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009987,GO:0015980,GO:0016020,GO:0016740,GO:0016765,GO:0018130,GO:0019438,GO:0033013,GO:0033014,GO:0034641,GO:0042168,GO:0042440,GO:0044237,GO:0044249,GO:0044271,GO:0044464,GO:0045333,GO:0046148,GO:0046483,GO:0051186,GO:0051188,GO:0055114,GO:0071704,GO:0071944,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576 2.5.1.141 0.000000000000000000000000000000000000000000000000000000000000000000000003749 257.0
DYD1_k127_1155768_12 Cytochrome c - - - 0.00000000000000000000000000000000000000000000000000000000000000000001205 247.0
DYD1_k127_1155768_13 Proto-chlorophyllide reductase 57 kD subunit - - - 0.00000000000000000000000000000000000000000000000000000000000000005722 233.0
DYD1_k127_1155768_14 Catalyzes a reversible aldol reaction between acetaldehyde and D-glyceraldehyde 3-phosphate to generate 2-deoxy- D-ribose 5-phosphate K01619 - 4.1.2.4 0.0000000000000000000000000000000000000000000000000000000001478 217.0
DYD1_k127_1155768_15 negative regulation of phosphate transmembrane transport K02039 GO:0000287,GO:0001558,GO:0003674,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005886,GO:0006873,GO:0006950,GO:0007154,GO:0008150,GO:0009266,GO:0009267,GO:0009268,GO:0009405,GO:0009408,GO:0009605,GO:0009628,GO:0009892,GO:0009987,GO:0009991,GO:0010468,GO:0010563,GO:0010605,GO:0010629,GO:0010966,GO:0016020,GO:0016036,GO:0019220,GO:0019222,GO:0019725,GO:0019897,GO:0019898,GO:0022898,GO:0030002,GO:0030145,GO:0030320,GO:0030643,GO:0031323,GO:0031324,GO:0031667,GO:0031668,GO:0031669,GO:0032409,GO:0032410,GO:0032412,GO:0032413,GO:0032879,GO:0033554,GO:0034605,GO:0034762,GO:0034763,GO:0034765,GO:0034766,GO:0040008,GO:0042221,GO:0042592,GO:0042594,GO:0042802,GO:0042803,GO:0043167,GO:0043169,GO:0043269,GO:0043271,GO:0044070,GO:0044092,GO:0044419,GO:0044424,GO:0044425,GO:0044459,GO:0044464,GO:0045936,GO:0046677,GO:0046872,GO:0046914,GO:0046983,GO:0048519,GO:0048523,GO:0048878,GO:0050789,GO:0050794,GO:0050801,GO:0050896,GO:0051049,GO:0051051,GO:0051128,GO:0051174,GO:0051704,GO:0051716,GO:0055062,GO:0055081,GO:0055082,GO:0055083,GO:0060255,GO:0065007,GO:0065008,GO:0065009,GO:0070887,GO:0071214,GO:0071236,GO:0071467,GO:0071496,GO:0071944,GO:0072501,GO:0072502,GO:0072505,GO:0072506,GO:0098771,GO:0104004,GO:1903792,GO:1903795,GO:1903796,GO:1903959,GO:1903960,GO:2000185,GO:2000186 - 0.000000000000000000000000000000000000000000000000000000001638 213.0
DYD1_k127_1155768_16 PFAM blue (type 1) copper domain protein - - - 0.000000000000000000000000000000000000000000000000000000009642 215.0
DYD1_k127_1155768_17 Subunits I and II form the functional core of the enzyme complex. Electrons originating in cytochrome c are transferred via heme a and Cu(A) to the binuclear center formed by heme a3 and Cu(B) K02275 - 1.9.3.1 0.0000000000000000000000000000000000000000000000000001883 196.0
DYD1_k127_1155768_18 Heme copper-type cytochrome quinol oxidase, subunit K02276 - 1.9.3.1 0.00000000000000000000000000000000000000000009324 168.0
DYD1_k127_1155768_19 Cytochrome c K02305 - - 0.00000000000000000000000000006067 127.0
DYD1_k127_1155768_2 aerobic electron transport chain K00425,K08738 - 1.10.3.14 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005852 545.0
DYD1_k127_1155768_20 ethanolamine utilization protein EutN carboxysome structural protein Ccml K04028 GO:0006950,GO:0006974,GO:0008150,GO:0009987,GO:0033554,GO:0050896,GO:0051716 - 0.0000000000000002459 83.0
DYD1_k127_1155768_21 ethanolamine utilization protein EutN carboxysome structural protein Ccml K04028 - - 0.000000000000006721 80.0
DYD1_k127_1155768_23 Belongs to the class-II aminoacyl-tRNA synthetase family. Phe-tRNA synthetase alpha subunit type 1 subfamily K01889 - 6.1.1.20 0.000003214 49.0
DYD1_k127_1155768_3 Trypsin K04771 - 3.4.21.107 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006539 376.0
DYD1_k127_1155768_4 Belongs to the PstS family K02040 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001193 360.0
DYD1_k127_1155768_5 probably responsible for the translocation of the substrate across the membrane K02037 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002017 333.0
DYD1_k127_1155768_6 Part of the ABC transporter complex PstSACB involved in phosphate import. Responsible for energy coupling to the transport system K02036 - 3.6.3.27 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002916 327.0
DYD1_k127_1155768_7 Part of the ABC transporter complex PstSACB involved in phosphate import. Responsible for energy coupling to the transport system K02036 - 3.6.3.27 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002296 331.0
DYD1_k127_1155768_8 Cytochrome C oxidase, cbb3-type, subunit III - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000001079 301.0
DYD1_k127_1155768_9 Phosphate transport system permease protein PstA K02038 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000004643 284.0
DYD1_k127_1167604_0 Belongs to the malate synthase family K01638 - 2.3.3.9 2.404e-240 753.0
DYD1_k127_1167604_1 Phosphoenolpyruvate phosphomutase K01637 - 4.1.3.1 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006215 600.0
DYD1_k127_1167604_2 xanthine dehydrogenase activity - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007088 563.0
DYD1_k127_1167604_3 L-lysine 6-monooxygenase (NADPH-requiring) K00384 - 1.8.1.9 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006705 307.0
DYD1_k127_1167604_4 RmuC family K09760 - - 0.0000000000000000000000000000000000000000000000000000000001446 218.0
DYD1_k127_1167604_5 - - - - 0.000000000000000000000000000000000000000000000004617 187.0
DYD1_k127_1167604_6 COGs COG2335 Secreted and surface protein containing fasciclin-like repeats - - - 0.00000000000000000006551 97.0
DYD1_k127_1173272_0 transmembrane transporter activity K18138 - - 0.0 1618.0
DYD1_k127_1173272_1 efflux transmembrane transporter activity K18300,K18308 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002154 398.0
DYD1_k127_1173272_2 HlyD family secretion protein - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001896 317.0
DYD1_k127_1173272_3 Transcriptional regulator PadR-like family - - - 0.0000000000000000000000000000000000008742 142.0
DYD1_k127_1173272_4 helix_turn_helix, Arsenical Resistance Operon Repressor K03892 - - 0.00000000000000000000000007456 111.0
DYD1_k127_1173272_5 cheY-homologous receiver domain - - - 0.0000000000000000000000006241 115.0
DYD1_k127_1173272_6 Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family K03585 - - 0.00000000000000000000006143 100.0
DYD1_k127_1173272_7 transmembrane signaling receptor activity K03406 - - 0.0000004715 59.0
DYD1_k127_1173377_0 Amidohydrolase family - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002571 471.0
DYD1_k127_1173377_1 ABC transporter K01990 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000005796 289.0
DYD1_k127_1173377_2 protein kinase activity - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000438 250.0
DYD1_k127_1173377_3 Catalyzes the condensation of isopentenyl diphosphate (IPP) with allylic pyrophosphates generating different type of terpenoids K00806 GO:0002094,GO:0003674,GO:0003824,GO:0004659,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006066,GO:0006629,GO:0006720,GO:0008150,GO:0008152,GO:0008299,GO:0008610,GO:0009058,GO:0009987,GO:0016093,GO:0016094,GO:0016740,GO:0016765,GO:0044237,GO:0044238,GO:0044249,GO:0044255,GO:0044281,GO:0044283,GO:0044424,GO:0044444,GO:0044464,GO:0046165,GO:0071704,GO:1901576,GO:1901615,GO:1901617 2.5.1.31 0.000000000000000000000000000000000000000000000000000000000000000000000227 250.0
DYD1_k127_1173377_4 heme binding - - - 0.0000000000000000000000000000000000000000000000000000000000000000423 233.0
DYD1_k127_1173377_5 FtsX-like permease family K02004 - - 0.000000000000000000000000000000001081 139.0
DYD1_k127_1173377_6 Winged helix DNA-binding domain - - - 0.000000000000000000000000000002159 126.0
DYD1_k127_1175884_0 ligase activity, forming nitrogen-metal bonds K02230 - 6.6.1.2 1.179e-228 716.0
DYD1_k127_1175884_1 Belongs to the glycosyl hydrolase 57 family K07405 - 3.2.1.1 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001262 460.0
DYD1_k127_1175884_2 Glycosyl transferase 4-like domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001395 321.0
DYD1_k127_1175884_3 - - - - 0.000000000000000000000000000000000000000000000000000001462 201.0
DYD1_k127_1175884_4 calcium- and calmodulin-responsive adenylate cyclase activity - - - 0.000000000000000000737 100.0
DYD1_k127_1183411_0 CO dehydrogenase flavoprotein domain protein K03519 - 1.2.5.3 0.000000000000000000000000000000000000000000000000000000000000000000000000000004391 278.0
DYD1_k127_1183411_1 aerobic-type carbon monoxide dehydrogenase, small subunit CoxS K03518 - 1.2.5.3 0.00000000000000000000000000000000000000000000000000000000008592 211.0
DYD1_k127_1183411_2 PFAM carbon monoxide dehydrogenase subunit G K09386 - - 0.0000000000000000000000000000000000734 139.0
DYD1_k127_1183411_3 Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain K16877 - 1.3.99.8 0.00000000000000000000000000000001035 129.0
DYD1_k127_1183411_4 Histidine kinase - - - 0.0000000000000000000000000001422 132.0
DYD1_k127_1183411_5 - - - - 0.000000000000000000000006119 104.0
DYD1_k127_1205460_0 Domain of unknown function (DUF4153) - - - 2.978e-195 618.0
DYD1_k127_1205460_1 hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds K12251 - 3.5.1.53 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005528 308.0
DYD1_k127_1205460_10 Activator of Hsp90 ATPase homolog 1-like protein - - - 0.000000000000000000000000000000000000000000000000000000000005698 211.0
DYD1_k127_1205460_11 Sortase and related acyltransferases K03823 - 2.3.1.183 0.0000000000000000000000000000000000000000000000000000000002715 207.0
DYD1_k127_1205460_12 Glyoxalase-like domain K08234 - - 0.00000000000000000000000000000000000000000000000000000003857 203.0
DYD1_k127_1205460_13 Acetyltransferase (GNAT) domain - - - 0.00000000000000000000000000000000000000000000000000002524 194.0
DYD1_k127_1205460_14 Transcriptional regulator - - - 0.00000000000000000000000000000000000000000000001114 181.0
DYD1_k127_1205460_15 Putative glycolipid-binding K09957 - - 0.000000000000000000000000000000000000000000002978 179.0
DYD1_k127_1205460_16 SnoaL-like polyketide cyclase - - - 0.0000000000000000000000000000000000000000002779 165.0
DYD1_k127_1205460_17 transcriptional regulators - - - 0.0000000000000000000000000000000000000000005349 160.0
DYD1_k127_1205460_18 oxidation-reduction process K09022 - 3.5.99.10 0.00000000000000000000000000000000000000001079 165.0
DYD1_k127_1205460_19 COG2801 Transposase and inactivated derivatives K07497 - - 0.0000000000000000000000000000000000000003271 149.0
DYD1_k127_1205460_2 COG1670 acetyltransferases, including N-acetylases of ribosomal proteins K03790,K03825,K06718 GO:0003674,GO:0003824,GO:0004596,GO:0005575,GO:0005622,GO:0005623,GO:0006464,GO:0006473,GO:0006474,GO:0006807,GO:0008080,GO:0008150,GO:0008152,GO:0009987,GO:0010467,GO:0016407,GO:0016410,GO:0016740,GO:0016746,GO:0016747,GO:0019538,GO:0031248,GO:0031365,GO:0032991,GO:0034212,GO:0036211,GO:0043170,GO:0043412,GO:0043543,GO:0044237,GO:0044238,GO:0044260,GO:0044267,GO:0044424,GO:0044464,GO:0051604,GO:0071704,GO:1901564,GO:1902493,GO:1902494,GO:1990234 2.3.1.128,2.3.1.178 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000007867 295.0
DYD1_k127_1205460_20 aminoglycoside hydroxyurea antibiotic resistance kinase K04343 - 2.7.1.72 0.000000000000000000000000000000000000004466 158.0
DYD1_k127_1205460_21 Lanthionine synthetase C family protein - - - 0.0000000000000000000000000000000001842 139.0
DYD1_k127_1205460_22 Uncharacterized conserved protein (DUF2277) - - - 0.000000000000000000000000000000003861 132.0
DYD1_k127_1205460_23 Predicted membrane protein (DUF2214) K08983 - - 0.00000000000000000000000000000001068 132.0
DYD1_k127_1205460_24 PFAM Phage derived protein Gp49-like (DUF891) - - - 0.0000000000000000000000000000002866 131.0
DYD1_k127_1205460_25 - - - - 0.00000000000000000000000000002032 126.0
DYD1_k127_1205460_26 sequence-specific DNA binding - - - 0.0000000000000000000000000003284 118.0
DYD1_k127_1205460_27 Cytotoxic translational repressor of toxin-antitoxin stability system - - - 0.0000000000000000000000000008018 115.0
DYD1_k127_1205460_28 Ankyrin repeats (many copies) - - - 0.00000000000000000000000002809 122.0
DYD1_k127_1205460_29 sequence-specific DNA binding K07726 - - 0.000000000000000000000002171 106.0
DYD1_k127_1205460_3 amine dehydrogenase activity K17285 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000826 300.0
DYD1_k127_1205460_30 Antitoxin component of a toxin-antitoxin (TA) module K19159 - - 0.000000000000000000001109 98.0
DYD1_k127_1205460_31 PFAM DNA polymerase beta domain protein region K07075 - - 0.000000000000000000002015 96.0
DYD1_k127_1205460_32 Cupin 2, conserved barrel domain protein - - - 0.0000000000000000008303 93.0
DYD1_k127_1205460_33 - - - - 0.000000000000000002509 94.0
DYD1_k127_1205460_34 TIGRFAM addiction module toxin, Txe YoeB family K19158 - - 0.0000000000000006607 81.0
DYD1_k127_1205460_35 Cupin 2, conserved barrel domain protein K19547 GO:0003674,GO:0003824,GO:0005488,GO:0005506,GO:0008150,GO:0008152,GO:0009058,GO:0009987,GO:0016853,GO:0016860,GO:0016863,GO:0016999,GO:0017000,GO:0017144,GO:0043167,GO:0043169,GO:0044237,GO:0044249,GO:0046872,GO:0046914,GO:0050897 5.3.3.19 0.000000000004225 72.0
DYD1_k127_1205460_4 Beta-lactamase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000114 297.0
DYD1_k127_1205460_5 Releases the N-terminal proline from various substrates K01259 - 3.4.11.5 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000001181 285.0
DYD1_k127_1205460_6 Haemolysin-III related K11068 - - 0.00000000000000000000000000000000000000000000000000000000000000000000002372 254.0
DYD1_k127_1205460_7 Phosphatidylethanolamine-binding protein K06910 - - 0.0000000000000000000000000000000000000000000000000000000000000000006844 244.0
DYD1_k127_1205460_8 PFAM bifunctional deaminase-reductase domain protein - - - 0.000000000000000000000000000000000000000000000000000000000000000003392 230.0
DYD1_k127_1205460_9 Glyoxalase K07032 - - 0.0000000000000000000000000000000000000000000000000000000000002901 214.0
DYD1_k127_1212795_0 Specifically methylates position 2 of adenine 2503 in 23S rRNA and position 2 of adenine 37 in tRNAs K06941 - 2.1.1.192 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000146 301.0
DYD1_k127_1212795_1 Catalyzes the attachment of L-aspartate to tRNA(Asp) in a two-step reaction L-aspartate is first activated by ATP to form Asp-AMP and then transferred to the acceptor end of tRNA(Asp) K01876 - 6.1.1.12 0.000000000000000000000000000000000000000000000000000000000000008606 223.0
DYD1_k127_1212795_2 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 K02768 - 2.7.1.202 0.0000000000000000000000001931 113.0
DYD1_k127_1212795_3 pfam yhs - - - 0.000000000000006477 77.0
DYD1_k127_1244864_0 repeat protein - - - 4.162e-230 738.0
DYD1_k127_1244864_1 Repeat domain in Vibrio, Colwellia, Bradyrhizobium and Shewanella - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004789 604.0
DYD1_k127_1244864_2 Amidohydrolase family - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001016 571.0
DYD1_k127_1244864_3 Lactonase, 7-bladed beta-propeller - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006022 353.0
DYD1_k127_1247257_0 TVP38 TMEM64 family inner membrane protein ydjZ - GO:0005575,GO:0005623,GO:0005886,GO:0016020,GO:0044464,GO:0071944 - 0.00000000000000000000000003335 116.0
DYD1_k127_1247257_1 hydrolase activity, acting on ester bonds - - - 0.000000002863 61.0
DYD1_k127_1247257_2 Catalyzes the ferrous insertion into protoporphyrin IX K01772 GO:0003674,GO:0003824,GO:0004325,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006725,GO:0006778,GO:0006779,GO:0006783,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009987,GO:0016829,GO:0018130,GO:0019438,GO:0033013,GO:0033014,GO:0034641,GO:0042168,GO:0042440,GO:0044237,GO:0044249,GO:0044271,GO:0044424,GO:0044464,GO:0046148,GO:0046483,GO:0051186,GO:0051188,GO:0071704,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576 4.99.1.1,4.99.1.9 0.0008195 42.0
DYD1_k127_1263255_0 Cytochrome bd-type quinol oxidase subunit 1 K00425 - 1.10.3.14 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005403 612.0
DYD1_k127_1263255_1 protein kinase activity - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000543 551.0
DYD1_k127_1263255_2 COG1294 Cytochrome bd-type quinol oxidase subunit 2 K00426 - 1.10.3.14 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008339 385.0
DYD1_k127_1263255_3 - - - - 0.000000000000000000000001041 117.0
DYD1_k127_126649_0 Involved in the cellular defense against the biological effects of O6-methylguanine (O6-MeG) and O4-methylthymine (O4-MeT) in DNA. Repairs the methylated nucleobase in DNA by stoichiometrically transferring the methyl group to a cysteine residue in the enzyme. This is a suicide reaction the enzyme is irreversibly inactivated K00567,K10778 - 2.1.1.63 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005904 391.0
DYD1_k127_126649_1 efflux transmembrane transporter activity - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002499 380.0
DYD1_k127_1314368_0 Belongs to the Glu Leu Phe Val dehydrogenases family K00263 - 1.4.1.9 0.00000000000000000002889 93.0
DYD1_k127_1314368_1 repeat protein - - - 0.00000000007214 74.0
DYD1_k127_1316796_0 TonB dependent receptor - - - 3.57e-234 763.0
DYD1_k127_1316796_1 PFAM RNA polymerase sigma factor 54, interaction - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009907 468.0
DYD1_k127_1316796_2 PFAM Nitrilase cyanide hydratase and apolipoprotein N-acyltransferase K01431,K12251 - 3.5.1.53,3.5.1.6 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001946 333.0
DYD1_k127_1316796_3 - - - - 0.000000000000000000000000000000000000774 148.0
DYD1_k127_1316796_4 Carboxypeptidase regulatory-like domain - - - 0.0000000000002391 80.0
DYD1_k127_1327454_0 Amidohydrolase family - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001647 350.0
DYD1_k127_1327454_1 Polymer-forming cytoskeletal - - - 0.000000009802 61.0
DYD1_k127_1327454_2 COG0745 Response regulators consisting of a CheY-like receiver K02483 - - 0.00000001241 65.0
DYD1_k127_1337911_0 Belongs to the class-V pyridoxal-phosphate-dependent aminotransferase family K04487 - 2.8.1.7 0.000000000000000000000000000000000000000000000000000000000000000000000000000001102 276.0
DYD1_k127_1381423_0 Converts o-succinylbenzoyl-CoA (OSB-CoA) to 1,4- dihydroxy-2-naphthoyl-CoA (DHNA-CoA) K01661 - 4.1.3.36 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001697 354.0
DYD1_k127_1381423_1 Acyl-CoA dehydrogenase, C-terminal domain K00249 - 1.3.8.7 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001102 359.0
DYD1_k127_1381423_2 Phosphate acyltransferases - - - 0.000000000000000000000000000000000000000000000000001759 207.0
DYD1_k127_1381423_3 Pas domain - - - 0.00000000000000000000000000000000000001661 152.0
DYD1_k127_1381423_4 SNARE associated Golgi protein - - - 0.000000000000000000000000000269 133.0
DYD1_k127_1381423_5 Acyl-CoA synthetase (AMP-forming) AMP-acid ligase II K00800,K04116,K12507 - 2.5.1.19 0.000000000000000000004507 106.0
DYD1_k127_1381423_6 - - - - 0.000000000000003859 80.0
DYD1_k127_1428489_0 Belongs to the peptidase M16 family K07263 - - 1.188e-309 977.0
DYD1_k127_1439531_0 Putative Flp pilus-assembly TadE/G-like - - - 0.0000000000000000000005739 109.0
DYD1_k127_1439531_1 Membrane - - - 0.0000000000000000001616 94.0
DYD1_k127_144049_0 glutamine synthetase K01915 GO:0001968,GO:0003674,GO:0003824,GO:0004356,GO:0005488,GO:0005515,GO:0005575,GO:0005576,GO:0005618,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005886,GO:0006082,GO:0006520,GO:0006541,GO:0006542,GO:0006807,GO:0008150,GO:0008152,GO:0008652,GO:0009058,GO:0009064,GO:0009084,GO:0009405,GO:0009605,GO:0009607,GO:0009893,GO:0009987,GO:0010468,GO:0010604,GO:0010628,GO:0010755,GO:0010756,GO:0010954,GO:0016020,GO:0016053,GO:0016211,GO:0016874,GO:0016879,GO:0016880,GO:0019222,GO:0019752,GO:0019899,GO:0020012,GO:0030162,GO:0030312,GO:0030682,GO:0031323,GO:0031325,GO:0032268,GO:0032270,GO:0035375,GO:0040007,GO:0043207,GO:0043436,GO:0044044,GO:0044237,GO:0044238,GO:0044249,GO:0044281,GO:0044283,GO:0044403,GO:0044413,GO:0044415,GO:0044419,GO:0044424,GO:0044444,GO:0044464,GO:0045862,GO:0046394,GO:0048518,GO:0048522,GO:0050789,GO:0050794,GO:0050896,GO:0051171,GO:0051173,GO:0051246,GO:0051247,GO:0051701,GO:0051704,GO:0051707,GO:0051805,GO:0051807,GO:0051832,GO:0051834,GO:0052173,GO:0052200,GO:0052564,GO:0052572,GO:0060255,GO:0065007,GO:0070613,GO:0071704,GO:0071944,GO:0075136,GO:0080090,GO:1901564,GO:1901566,GO:1901576,GO:1901605,GO:1901607,GO:1903317,GO:1903319 6.3.1.2 5e-227 713.0
DYD1_k127_144049_1 Belongs to the aldehyde dehydrogenase family K00128,K00130,K10217 - 1.2.1.3,1.2.1.32,1.2.1.8,1.2.1.85 5.343e-202 639.0
DYD1_k127_144049_2 Domain present in carbohydrate binding proteins and sugar hydrolses K07218 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008246 317.0
DYD1_k127_144049_3 Endoribonuclease L-PSP K15067 - 3.5.99.5 0.00000000000000000000000000000000000000000000000000007947 190.0
DYD1_k127_144049_4 AAA domain, putative AbiEii toxin, Type IV TA system K01990 - - 0.00000000000000000000000000000000000000000000000001322 194.0
DYD1_k127_144049_5 lipoprotein involved in nitrous oxide reduction K19342 - - 0.000000000000000000000000000000000003457 145.0
DYD1_k127_144049_6 Catalyzes the hydrolysis of N-formyl-L-kynurenine to L- kynurenine, the second step in the kynurenine pathway of tryptophan degradation K07130 GO:0003674,GO:0003824,GO:0004061,GO:0005488,GO:0006082,GO:0006520,GO:0006568,GO:0006569,GO:0006576,GO:0006586,GO:0006725,GO:0006766,GO:0006767,GO:0006807,GO:0008150,GO:0008152,GO:0008270,GO:0009056,GO:0009063,GO:0009072,GO:0009074,GO:0009308,GO:0009310,GO:0009987,GO:0016054,GO:0016787,GO:0016810,GO:0016811,GO:0019439,GO:0019441,GO:0019752,GO:0032787,GO:0034641,GO:0042180,GO:0042402,GO:0042430,GO:0042436,GO:0042537,GO:0043167,GO:0043169,GO:0043420,GO:0043436,GO:0044106,GO:0044237,GO:0044238,GO:0044248,GO:0044270,GO:0044281,GO:0044282,GO:0046218,GO:0046395,GO:0046483,GO:0046700,GO:0046872,GO:0046914,GO:0070189,GO:0071704,GO:1901360,GO:1901361,GO:1901564,GO:1901565,GO:1901575,GO:1901605,GO:1901606 3.5.1.9 0.00000000000000000000000000000235 122.0
DYD1_k127_144049_7 Putative MetA-pathway of phenol degradation - - - 0.000000000000000000000002061 113.0
DYD1_k127_144049_8 Abc transporter K01992 - - 0.000000000000000000000008264 117.0
DYD1_k127_1482688_0 NHL repeat - - - 0.000001836 60.0
DYD1_k127_1484938_0 Respiratory-chain NADH dehydrogenase, 49 Kd subunit - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007131 531.0
DYD1_k127_1484938_1 Amino acid permease - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003012 489.0
DYD1_k127_1484938_10 helix_turn_helix, arabinose operon control protein - - - 0.000000000000000000000000000000000000009119 163.0
DYD1_k127_1484938_11 Protein of unknown function (DUF456) K09793 - - 0.000000000000000000002107 106.0
DYD1_k127_1484938_12 Helix-turn-helix XRE-family like proteins - - - 0.00003042 50.0
DYD1_k127_1484938_2 PFAM NADH Ubiquinone plastoquinone (complex I) K12137 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001813 479.0
DYD1_k127_1484938_3 Proton-conducting membrane transporter K12141 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003598 426.0
DYD1_k127_1484938_4 NADH ubiquinone oxidoreductase, 20 Kd subunit - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000003222 283.0
DYD1_k127_1484938_5 NADH dehydrogenase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000004322 299.0
DYD1_k127_1484938_6 PFAM phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 K02806 - - 0.0000000000000000000000000000000000000000000000000000000000243 214.0
DYD1_k127_1484938_7 hydrogenase 4 membrane K12140 - - 0.0000000000000000000000000000000000000000000000000007354 190.0
DYD1_k127_1484938_8 NADP oxidoreductase coenzyme F420-dependent - - - 0.000000000000000000000000000000000000000004809 164.0
DYD1_k127_1484938_9 Magnesium chelatase, subunit ChlI K07391 - - 0.0000000000000000000000000000000000000001486 157.0
DYD1_k127_1512046_0 ABC transporter, ATP-binding protein - - - 0.0000000000000000000000000000000000000000000000000000000000000000000002405 243.0
DYD1_k127_1512046_1 ribonuclease BN K07058 - - 0.000000000000000000000000000000000000000000000000000000000000000000006848 244.0
DYD1_k127_1512046_2 Mycothiol maleylpyruvate isomerase N-terminal domain - - - 0.0000000000000000000000000000000000000000000000000379 188.0
DYD1_k127_1512046_3 - - - - 0.00000000000000000000001992 114.0
DYD1_k127_1528788_0 COGs COG3328 Transposase and inactivated derivatives K07493 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000001103 294.0
DYD1_k127_1528788_1 EamA-like transporter family - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000001599 287.0
DYD1_k127_1528788_2 SMART Transcription regulator, AsnC-type K03718,K03719 - - 0.00000000000000000000000000000000000000000813 161.0
DYD1_k127_1528788_3 Alpha beta hydrolase - - - 0.00000000000000000000000000003221 122.0
DYD1_k127_1528788_4 PFAM Adenylate and Guanylate cyclase catalytic domain K01768 - 4.6.1.1 0.000000000000001262 91.0
DYD1_k127_1528788_5 phosphorelay signal transduction system K12132 - 2.7.11.1 0.0000000003263 74.0
DYD1_k127_1545507_0 Peptidase, M16 K07263 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001192 610.0
DYD1_k127_1545507_1 Peptidase, M16 K07263 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000147 431.0
DYD1_k127_1545507_2 Amidohydrolase family - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000241 381.0
DYD1_k127_1548605_0 Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain K03520 - 1.2.5.3 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000284 481.0
DYD1_k127_1548605_1 COGs COG1319 Aerobic-type carbon monoxide dehydrogenase middle subunit CoxM CutM homologs K03519 - 1.2.5.3 0.00000000000000000000000000000000000000000000000000000000000000001381 241.0
DYD1_k127_1569136_0 antibiotic catabolic process K18235 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002078 456.0
DYD1_k127_1569136_1 UPF0365 protein - - - 0.00000000000000000000000000000000000000000000000000002203 210.0
DYD1_k127_1569136_2 - - - - 0.00000000003592 73.0
DYD1_k127_1569136_3 Membrane-bound serine protease (ClpP class) K07403 - - 0.000000000179 73.0
DYD1_k127_1579589_0 Helix-hairpin-helix motif K14162 - 2.7.7.7 2.59e-293 937.0
DYD1_k127_1579589_1 Atp-dependent helicase - - - 1.547e-286 906.0
DYD1_k127_1579589_10 response regulator, receiver - - - 0.000002452 55.0
DYD1_k127_1579589_11 Rdx family K07401 - - 0.00001261 49.0
DYD1_k127_1579589_2 LytB protein K03527 - 1.17.7.4 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003155 475.0
DYD1_k127_1579589_3 Catalyzes the phosphorylation of D-fructose 6-phosphate to fructose 1,6-bisphosphate by ATP, the first committing step of glycolysis K21071 - 2.7.1.11,2.7.1.90 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003358 456.0
DYD1_k127_1579589_4 - - - - 0.00000000000000000000000000000000001023 156.0
DYD1_k127_1579589_5 - - - - 0.000000000000000000000000007967 128.0
DYD1_k127_1579589_6 Thioesterase superfamily K07107 - - 0.00000000000000000000000002924 115.0
DYD1_k127_1579589_7 SMART chemotaxis sensory transducer, histidine kinase HAMP region domain protein K03406 - - 0.000000000000000000007059 108.0
DYD1_k127_1579589_8 - - - - 0.000000000003701 69.0
DYD1_k127_1579589_9 Bacterial regulatory proteins, tetR family - - - 0.00000001106 64.0
DYD1_k127_158718_0 Fibronectin type 3 domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000153 540.0
DYD1_k127_158718_1 Sugar (and other) transporter K08178 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001367 484.0
DYD1_k127_158718_2 protein kinase activity - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000001742 271.0
DYD1_k127_158718_3 Sarcosine oxidase - - - 0.000000000000000000000000000000000000000000000000000000000000007449 230.0
DYD1_k127_158718_4 Protein kinase domain K12132 - 2.7.11.1 0.0000000000000000000000000000000004836 146.0
DYD1_k127_1592638_0 NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain K00335 - 1.6.5.3 4.85e-212 667.0
DYD1_k127_1592638_1 NADH-ubiquinone oxidoreductase-G iron-sulfur binding region K00336 - 1.6.5.3 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007156 562.0
DYD1_k127_1609230_0 Belongs to the MurCDEF family K01924 - 6.3.2.8 0.00000000000000000000000000000000000000000527 160.0
DYD1_k127_1609230_1 Transfers the N-acyl diglyceride group on what will become the N-terminal cysteine of membrane lipoproteins K13292 - - 0.0000000000000000000000000001122 126.0
DYD1_k127_1609230_2 exo-alpha-(2->6)-sialidase activity - - - 0.00000008363 65.0
DYD1_k127_1609230_3 acetyltransferases and hydrolases with the alpha beta hydrolase fold - - - 0.0007009 52.0
DYD1_k127_1636135_0 Methylenetetrahydrofolate reductase K00297,K00547 - 1.5.1.20,2.1.1.10 4.936e-229 726.0
DYD1_k127_1636135_1 Domain of unknown function (DUF4143) K07133 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001374 553.0
DYD1_k127_1636135_2 3-isopropylmalate dehydratase activity K01681,K01703,K01704,K17749 - 4.2.1.3,4.2.1.33,4.2.1.35 0.000000000000000000000000000000000000000000000000000000000000004818 220.0
DYD1_k127_1636135_3 HNH endonuclease K07454 - - 0.0000000000000000000000000000000000000000000000000000000000002324 224.0
DYD1_k127_1691168_0 Isocitrate/isopropylmalate dehydrogenase K00031 - 1.1.1.42 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002578 552.0
DYD1_k127_1691168_1 Presumably involved in the processing and regular turnover of intracellular proteins. Catalyzes the removal of unsubstituted N-terminal amino acids from various peptides K01255 - 3.4.11.1 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006624 425.0
DYD1_k127_1691168_2 Belongs to the peptidase S8 family - - - 0.000000000000000000000000000000000000000000000000000000006498 216.0
DYD1_k127_1691168_3 TonB-dependent Receptor Plug Domain - - - 0.000000000000004979 89.0
DYD1_k127_1691168_4 YicC domain protein - - - 0.000000000000855 72.0
DYD1_k127_1691168_5 HB1, ASXL, restriction endonuclease HTH domain - - - 0.0000003119 59.0
DYD1_k127_1691168_7 - - - - 0.0003947 51.0
DYD1_k127_1693360_0 Creatinine amidohydrolase K01470 - 3.5.2.10 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008099 344.0
DYD1_k127_1693360_1 choline dehydrogenase activity - - - 0.000000000000000000000000000000000002364 141.0
DYD1_k127_1717864_0 Catalyzes the synthesis of the hydroxymethylpyrimidine phosphate (HMP-P) moiety of thiamine from aminoimidazole ribotide (AIR) in a radical S-adenosyl-L-methionine (SAM)-dependent reaction K03147 - 4.1.99.17 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000532 614.0
DYD1_k127_1717864_1 Catalyzes the ATP-dependent transfer of a sulfur to tRNA to produce 4-thiouridine in position 8 of tRNAs, which functions as a near-UV photosensor. Also catalyzes the transfer of sulfur to the sulfur carrier protein ThiS, forming ThiS-thiocarboxylate. This is a step in the synthesis of thiazole, in the thiamine biosynthesis pathway. The sulfur is donated as persulfide by IscS K03151 GO:0000049,GO:0002937,GO:0003674,GO:0003676,GO:0003723,GO:0003824,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006139,GO:0006396,GO:0006399,GO:0006400,GO:0006725,GO:0006766,GO:0006767,GO:0006772,GO:0006790,GO:0006807,GO:0008033,GO:0008150,GO:0008152,GO:0009058,GO:0009110,GO:0009228,GO:0009451,GO:0009987,GO:0010467,GO:0016070,GO:0017144,GO:0018130,GO:0019438,GO:0034227,GO:0034470,GO:0034641,GO:0034660,GO:0042364,GO:0042723,GO:0042724,GO:0043170,GO:0043412,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044272,GO:0044281,GO:0044283,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0071704,GO:0072527,GO:0072528,GO:0090304,GO:0097159,GO:1901360,GO:1901362,GO:1901363,GO:1901564,GO:1901566,GO:1901576 2.8.1.4 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002032 513.0
DYD1_k127_1717864_10 Carboxypeptidase regulatory-like domain - - - 0.000000000000000000000000000000000000007326 161.0
DYD1_k127_1717864_11 Iron-sulfur cluster assembly protein - - - 0.00000000000000000000000000000000003881 137.0
DYD1_k127_1717864_12 peptide deformylase activity K01462 - 3.5.1.88 0.000000000000000000000000000000001054 147.0
DYD1_k127_1717864_13 efflux transmembrane transporter activity - - - 0.0000000000000000000000000001484 125.0
DYD1_k127_1717864_14 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase K07141 - 2.7.7.76 0.000000000000000000000001285 111.0
DYD1_k127_1717864_15 Matrixin - - - 0.00000000000001003 77.0
DYD1_k127_1717864_16 Lipase maturation factor - - - 0.00000006764 62.0
DYD1_k127_1717864_2 Uncharacterized protein family (UPF0051) K09014 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003098 402.0
DYD1_k127_1717864_3 MacB-like periplasmic core domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002281 364.0
DYD1_k127_1717864_4 3'-5' exonuclease K03684 - 3.1.13.5 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007431 312.0
DYD1_k127_1717864_5 Beta-lactamase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000116 301.0
DYD1_k127_1717864_6 MacB-like periplasmic core domain - - - 0.00000000000000000000000000000000000000000000000001158 192.0
DYD1_k127_1717864_7 Belongs to the acetylglutamate kinase family. ArgB subfamily K00930 GO:0003674,GO:0003824,GO:0003991,GO:0005488,GO:0006082,GO:0006520,GO:0006525,GO:0006526,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0008652,GO:0009058,GO:0009064,GO:0009084,GO:0009987,GO:0016053,GO:0016301,GO:0016310,GO:0016597,GO:0016740,GO:0016772,GO:0016774,GO:0019752,GO:0031406,GO:0034618,GO:0036094,GO:0043167,GO:0043168,GO:0043169,GO:0043177,GO:0043436,GO:0044237,GO:0044238,GO:0044249,GO:0044281,GO:0044283,GO:0046394,GO:0071704,GO:1901564,GO:1901566,GO:1901576,GO:1901605,GO:1901607 2.7.2.8 0.0000000000000000000000000000000000000000000000001693 180.0
DYD1_k127_1717864_8 HTH domain - - - 0.00000000000000000000000000000000000000000000001648 179.0
DYD1_k127_1717864_9 Peptidase family M28 - - - 0.000000000000000000000000000000000000000000006747 183.0
DYD1_k127_1726520_0 bacterial-type flagellum-dependent cell motility K16147 - 2.4.99.16 0.0000000000000000002458 101.0
DYD1_k127_1758163_0 Alpha beta hydrolase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000005515 261.0
DYD1_k127_1758163_1 PFAM Abortive infection protein K07052 - - 0.000000000000000000000000000000000000000000001795 175.0
DYD1_k127_1758163_2 hydrolase of the alpha beta superfamily K07017 - - 0.0000000000001097 76.0
DYD1_k127_1758163_3 cellulose binding K12132 - 2.7.11.1 0.00000000004115 72.0
DYD1_k127_1758163_4 6-O-methylguanine DNA methyltransferase, DNA binding domain K00567 - 2.1.1.63 0.0000003193 53.0
DYD1_k127_1758769_0 protein kinase activity - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003155 533.0
DYD1_k127_1758769_1 Serine/Threonine protein kinases, catalytic domain K12132 - 2.7.11.1 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001427 391.0
DYD1_k127_1758769_2 Glucosamine-6-phosphate isomerases/6-phosphogluconolactonase K02564 - 3.5.99.6 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001115 319.0
DYD1_k127_1758769_3 protein kinase activity - - - 0.000000000000000000000000000000000000002761 148.0
DYD1_k127_1758769_4 Aldo/keto reductase family - - - 0.0000000000000003906 80.0
DYD1_k127_1758769_6 PIN domain - - - 0.0002311 48.0
DYD1_k127_1758889_0 Aldehyde K07303 - 1.3.99.16 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008344 331.0
DYD1_k127_1767037_0 WD40-like Beta Propeller Repeat - - - 2.02e-237 770.0
DYD1_k127_1767037_1 FtsX-like permease family K02004 - - 4.044e-224 722.0
DYD1_k127_1767037_2 Lipocalin-like domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005431 421.0
DYD1_k127_1767037_3 Leishmanolysin - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003377 326.0
DYD1_k127_1767037_4 ABC transporter K02003 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000004674 269.0
DYD1_k127_1767037_5 PFAM Alpha beta hydrolase K07019 - - 0.00000000000000000000000000000000000000000000000000000000000000000000001179 250.0
DYD1_k127_1775296_0 WD40 domain protein beta Propeller K08884,K12132 - 2.7.11.1 0.0000000000000000000000000000000000000003216 157.0
DYD1_k127_1775296_1 phospholipase Carboxylesterase K06999 - - 0.000000000000000000000000000000000000001187 153.0
DYD1_k127_1775296_2 PFAM L-carnitine dehydratase bile acid-inducible protein F - - - 0.0000000000000000002499 89.0
DYD1_k127_1779382_0 Prokaryotic cytochrome b561 - - - 0.0000000000000000000000000000000000000000000000000000000000005857 219.0
DYD1_k127_1779382_1 Part of the MsrPQ system that repairs oxidized periplasmic proteins containing methionine sulfoxide residues (Met-O), using respiratory chain electrons. Thus protects these proteins from oxidative-stress damage caused by reactive species of oxygen and chlorine generated by the host defense mechanisms. MsrPQ is essential for the maintenance of envelope integrity under bleach stress, rescuing a wide series of structurally unrelated periplasmic proteins from methionine oxidation. The catalytic subunit MsrP is non-stereospecific, being able to reduce both (R-) and (S-) diastereoisomers of methionine sulfoxide - - - 0.0000000000000000000000000000000000000000000000000000000000008834 217.0
DYD1_k127_1779382_2 Hydrolase - - - 0.0000000001013 69.0
DYD1_k127_1818231_0 PFAM NAD-dependent epimerase dehydratase K01784,K10011,K12449 GO:0000166,GO:0003674,GO:0003824,GO:0005488,GO:0005515,GO:0006040,GO:0006139,GO:0006725,GO:0006793,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009225,GO:0009226,GO:0009987,GO:0016043,GO:0016491,GO:0016614,GO:0016616,GO:0016740,GO:0016741,GO:0016742,GO:0016829,GO:0016830,GO:0016831,GO:0018130,GO:0019438,GO:0022607,GO:0033319,GO:0033320,GO:0034214,GO:0034641,GO:0034654,GO:0036094,GO:0042221,GO:0042802,GO:0043167,GO:0043168,GO:0043933,GO:0044085,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0046349,GO:0046483,GO:0046677,GO:0048037,GO:0048040,GO:0050662,GO:0050896,GO:0051259,GO:0051287,GO:0055086,GO:0055114,GO:0065003,GO:0070403,GO:0071704,GO:0071840,GO:0097159,GO:0099618,GO:0099619,GO:1901135,GO:1901137,GO:1901265,GO:1901360,GO:1901362,GO:1901363,GO:1901576,GO:2001313,GO:2001315 1.1.1.305,2.1.2.13,5.1.3.2 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004254 381.0
DYD1_k127_1818231_1 PFAM Glycosyl transferase family 4 K02851 - 2.7.8.33,2.7.8.35 0.0000000000000001531 87.0
DYD1_k127_1833457_0 Dienelactone hydrolase family K01061 - 3.1.1.45 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002759 308.0
DYD1_k127_1833457_1 Belongs to the amidase family K01426 - 3.5.1.4 0.00000000000000000000000000000000000000000000000000002361 193.0
DYD1_k127_1851525_0 NeuB family K03856 - 2.5.1.54 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002298 465.0
DYD1_k127_1851525_1 Metallo-beta-lactamase superfamily - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000004585 266.0
DYD1_k127_1851525_2 Outer membrane lipoprotein carrier protein LolA K03634 - - 0.000000000000000000000000007852 126.0
DYD1_k127_1851525_3 Asp/Glu/Hydantoin racemase K01779 - 5.1.1.13 0.000002213 55.0
DYD1_k127_185704_0 NAD synthase K01916 - 6.3.1.5 2.628e-200 642.0
DYD1_k127_185704_1 Zinc phosphodiesterase, which displays some tRNA 3'- processing endonuclease activity. Probably involved in tRNA maturation, by removing a 3'-trailer from precursor tRNA K00784 - 3.1.26.11 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001153 348.0
DYD1_k127_185704_10 PFAM Inosine uridine-preferring nucleoside hydrolase K01250 - - 0.000000000000000000000000000000000000000002341 174.0
DYD1_k127_185704_11 4Fe-4S single cluster domain K07001 - - 0.000000000000000000000000000000000000003092 162.0
DYD1_k127_185704_12 Uncharacterized conserved protein (DUF2203) - - - 0.00000000000000000000000000005186 121.0
DYD1_k127_185704_13 Two component, sigma54 specific, transcriptional regulator, Fis family K02481,K07713 - - 0.00000000000000000000001663 113.0
DYD1_k127_185704_14 ABC-type transport system involved in resistance to organic solvents periplasmic component K02067 - - 0.0000000000000000001017 100.0
DYD1_k127_185704_15 Nuclear transport factor 2 (NTF2) domain K01822 - 5.3.3.1 0.0000283 51.0
DYD1_k127_185704_2 transporter - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006665 347.0
DYD1_k127_185704_3 Protein of unknown function DUF72 - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000005008 298.0
DYD1_k127_185704_4 Integral membrane protein - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000198 287.0
DYD1_k127_185704_5 FES K03575 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000002539 256.0
DYD1_k127_185704_6 ATPases associated with a variety of cellular activities K02065 - - 0.000000000000000000000000000000000000000000000000000000000000000003093 237.0
DYD1_k127_185704_7 Permease MlaE K02066 - - 0.00000000000000000000000000000000000000000000000000000000003048 215.0
DYD1_k127_185704_8 Thioesterase superfamily - - - 0.0000000000000000000000000000000000000000000000000000000004062 207.0
DYD1_k127_185704_9 3-hydroxyacyl-CoA dehydrogenase - - - 0.0000000000000000000000000000000000000000000000003821 187.0
DYD1_k127_1871008_0 TonB dependent receptor - - - 2.757e-256 824.0
DYD1_k127_1871008_1 Catalyzes the ATP-dependent transfer of a sulfur to tRNA to produce 4-thiouridine in position 8 of tRNAs, which functions as a near-UV photosensor. Also catalyzes the transfer of sulfur to the sulfur carrier protein ThiS, forming ThiS-thiocarboxylate. This is a step in the synthesis of thiazole, in the thiamine biosynthesis pathway. The sulfur is donated as persulfide by IscS K03151 GO:0000049,GO:0002937,GO:0003674,GO:0003676,GO:0003723,GO:0003824,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006139,GO:0006396,GO:0006399,GO:0006400,GO:0006725,GO:0006766,GO:0006767,GO:0006772,GO:0006790,GO:0006807,GO:0008033,GO:0008150,GO:0008152,GO:0009058,GO:0009110,GO:0009228,GO:0009451,GO:0009987,GO:0010467,GO:0016070,GO:0017144,GO:0018130,GO:0019438,GO:0034227,GO:0034470,GO:0034641,GO:0034660,GO:0042364,GO:0042723,GO:0042724,GO:0043170,GO:0043412,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044272,GO:0044281,GO:0044283,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0071704,GO:0072527,GO:0072528,GO:0090304,GO:0097159,GO:1901360,GO:1901362,GO:1901363,GO:1901564,GO:1901566,GO:1901576 2.8.1.4 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004296 497.0
DYD1_k127_1871008_10 - - - - 0.0000148 54.0
DYD1_k127_1871008_11 Helix-turn-helix XRE-family like proteins - - - 0.00001748 50.0
DYD1_k127_1871008_2 DNA ligase (ATP) activity K01971 - 6.5.1.1 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007682 420.0
DYD1_k127_1871008_3 L-lysine 6-monooxygenase (NADPH-requiring) K00384 - 1.8.1.9 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000205 312.0
DYD1_k127_1871008_4 With LigD forms a non-homologous end joining (NHEJ) DNA repair enzyme, which repairs dsDNA breaks with reduced fidelity. Binds linear dsDNA with 5'- and 3'- overhangs but not closed circular dsDNA nor ssDNA. Recruits and stimulates the ligase activity of LigD K10979 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002267 306.0
DYD1_k127_1871008_5 SusD family K21572 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000004834 314.0
DYD1_k127_1871008_6 Protein of unknown function DUF72 - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000002318 262.0
DYD1_k127_1871008_7 HipA N-terminal domain protein K07154 - 2.7.11.1 0.0000000000000000000000000000000000000000000000000000000000000000000000005835 261.0
DYD1_k127_1871008_8 Tetratricopeptide repeat - - - 0.00000000000000000000000000000000000000000000000000000000000000000001004 244.0
DYD1_k127_1871008_9 TIGRFAM geranylgeranyl reductase family K21401 - 1.3.99.38 0.000000000000001271 87.0
DYD1_k127_1915829_0 PFAM YdjC family protein K03478 - 3.5.1.105 0.000000000000000000000000000000000000000000000000000000000000000000001026 248.0
DYD1_k127_1917497_0 Part of the outer membrane protein assembly complex, which is involved in assembly and insertion of beta-barrel proteins into the outer membrane - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003086 404.0
DYD1_k127_1917497_1 Histidine kinase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001766 335.0
DYD1_k127_1917497_10 Belongs to the ompA family K03286 - - 0.0000000000000000000000000242 121.0
DYD1_k127_1917497_11 domain protein - - - 0.000000000000000000003924 106.0
DYD1_k127_1917497_13 S-layer homology domain - - - 0.0000148 57.0
DYD1_k127_1917497_2 helix_turn_helix, Lux Regulon - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000005517 265.0
DYD1_k127_1917497_3 Zinc-binding dehydrogenase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000003476 243.0
DYD1_k127_1917497_4 KaiC K08482 - - 0.0000000000000000000000000000000000000000000000000000000000000001372 225.0
DYD1_k127_1917497_5 Protein of unknown function (DUF3494) K11904 - - 0.000000000000000000000000000000000000000000000000000000000003417 216.0
DYD1_k127_1917497_6 Protein of unknown function (DUF3494) - - - 0.00000000000000000000000000000000000000000000000000000002069 213.0
DYD1_k127_1917497_7 response regulator K07782 - - 0.000000000000000000000000000000000000000001379 167.0
DYD1_k127_1917497_8 Histidine kinase - - - 0.0000000000000000000000000000000000000003032 167.0
DYD1_k127_1917497_9 phosphorelay signal transduction system K02535 - 3.5.1.108 0.0000000000000000000000000001138 124.0
DYD1_k127_1922642_0 Peptide methionine sulfoxide reductase K07304 - 1.8.4.11 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004258 358.0
DYD1_k127_1922642_1 tRNA synthetases class I (W and Y) K01867 - 6.1.1.2 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004318 356.0
DYD1_k127_1922642_2 Involved in chlorophyll biosynthesis. Catalyzes the insertion of magnesium ion into protoporphyrin IX to yield Mg- protoporphyrin IX K03405 - 6.6.1.1 0.000000000000000002655 86.0
DYD1_k127_1922642_3 Toxic component of a toxin-antitoxin (TA) module. An RNase K07064 - - 0.00002382 51.0
DYD1_k127_1930387_0 Domain of unknown function (DUF4159) - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009258 341.0
DYD1_k127_193876_0 Transposase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001534 347.0
DYD1_k127_193876_1 nitronate monooxygenase activity K00459,K02371 - 1.13.12.16,1.3.1.9 0.0000000000000002646 80.0
DYD1_k127_193876_2 COG2070 Dioxygenases related to 2-nitropropane dioxygenase K00459 - 1.13.12.16 0.000000001429 59.0
DYD1_k127_1940003_0 protein kinase activity - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000001431 291.0
DYD1_k127_1940003_1 protein kinase activity K12132 - 2.7.11.1 0.000000000000000000000000000000000000000000000000000000000000002453 236.0
DYD1_k127_1940003_2 PFAM FAD linked oxidase domain protein - - - 0.00000000000000000000000000000006393 126.0
DYD1_k127_1940004_0 Adenylate and Guanylate cyclase catalytic domain - - - 0.000000000000000000000000000000000000000001731 161.0
DYD1_k127_1940004_1 transferase activity, transferring hexosyl groups K05841 GO:0000003,GO:0003006,GO:0003674,GO:0003824,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005773,GO:0005774,GO:0005886,GO:0006629,GO:0007275,GO:0008150,GO:0008152,GO:0008194,GO:0008202,GO:0009058,GO:0009791,GO:0009812,GO:0009813,GO:0009845,GO:0010154,GO:0010214,GO:0015020,GO:0016020,GO:0016125,GO:0016740,GO:0016757,GO:0016758,GO:0016906,GO:0022414,GO:0031090,GO:0032501,GO:0032502,GO:0035251,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0044238,GO:0044422,GO:0044424,GO:0044437,GO:0044444,GO:0044446,GO:0044464,GO:0046527,GO:0048316,GO:0048608,GO:0048731,GO:0048856,GO:0051505,GO:0051506,GO:0051507,GO:0051508,GO:0051509,GO:0061458,GO:0071704,GO:0071944,GO:0080043,GO:0080044,GO:0090351,GO:0098588,GO:0098805,GO:1901360,GO:1901576,GO:1901615 2.4.1.173 0.00000000000000000000000000000000000002571 152.0
DYD1_k127_196847_0 Facilitates transcription termination by a mechanism that involves Rho binding to the nascent RNA, activation of Rho's RNA-dependent ATPase activity, and release of the mRNA from the DNA template K02887,K03628 GO:0003674,GO:0003676,GO:0003723,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006139,GO:0006351,GO:0006353,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0016070,GO:0018130,GO:0019438,GO:0032774,GO:0034641,GO:0034645,GO:0034654,GO:0042802,GO:0043170,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044271,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0071704,GO:0090304,GO:0097159,GO:0097659,GO:1901360,GO:1901362,GO:1901363,GO:1901576 - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006992 606.0
DYD1_k127_196847_1 S-adenosylmethionine-dependent methyltransferase K06969 - 2.1.1.191 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006592 413.0
DYD1_k127_196847_2 Functions as a peptidoglycan terminase that cleaves nascent peptidoglycan strands endolytically to terminate their elongation K07082 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000296 266.0
DYD1_k127_196847_3 Peptidase family M50 - - - 0.000000000000000000000000000000000000000000000000000000000001709 223.0
DYD1_k127_196847_4 PFAM Chorismate mutase of the AroH class K06208 - 5.4.99.5 0.000000000000000000000000000000000006653 141.0
DYD1_k127_196847_5 Condenses 4-methyl-5-(beta-hydroxyethyl)thiazole monophosphate (THZ-P) and 2-methyl-4-amino-5-hydroxymethyl pyrimidine pyrophosphate (HMP-PP) to form thiamine monophosphate (TMP) K00788 - 2.5.1.3 0.000000000000000000000000000000004478 137.0
DYD1_k127_196847_6 Could be a nuclease involved in processing of the 5'-end of pre-16S rRNA K07447 - - 0.0000000000000000000000000000000054 133.0
DYD1_k127_196847_7 curli production assembly transport component CsgG K04087 - - 0.0000000000000000000002424 108.0
DYD1_k127_1986139_0 that it carries out the mismatch recognition step. This protein has a weak ATPase activity K03555 GO:0003674,GO:0003676,GO:0003677,GO:0003684,GO:0003690,GO:0003824,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0006139,GO:0006259,GO:0006281,GO:0006298,GO:0006725,GO:0006807,GO:0006950,GO:0006974,GO:0008094,GO:0008150,GO:0008152,GO:0009987,GO:0016462,GO:0016787,GO:0016817,GO:0016818,GO:0016887,GO:0017111,GO:0030983,GO:0032300,GO:0032991,GO:0033554,GO:0034641,GO:0042623,GO:0043170,GO:0044237,GO:0044238,GO:0044260,GO:0044424,GO:0044464,GO:0046483,GO:0050896,GO:0051716,GO:0071704,GO:0090304,GO:0097159,GO:1901360,GO:1901363,GO:1990391 - 1.141e-223 734.0
DYD1_k127_1986139_1 Domain in cystathionine beta-synthase and other proteins. K01697 - 4.2.1.22 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003006 592.0
DYD1_k127_1986139_10 - - - - 0.000000000000000000000000000000000000000000000000000000000000000000000002441 261.0
DYD1_k127_1986139_11 Helix-turn-helix domain - - - 0.00000000000000000000000000000000000000000000000000000000000007435 224.0
DYD1_k127_1986139_12 DNA polymerase III, delta subunit K02340 - 2.7.7.7 0.00000000000000000000000000000000000000000000000000161 196.0
DYD1_k127_1986139_13 Catalyzes the transfer of a ribosyl phosphate group from 5-phosphoribose 1-diphosphate to orotate, leading to the formation of orotidine monophosphate (OMP) K00762 - 2.4.2.10 0.0000000000000000000000000000000000000000000000003795 182.0
DYD1_k127_1986139_14 phosphatase homologous to the C-terminal domain of histone macroH2A1 - - - 0.00000000000000000000000000000000000000000000001762 180.0
DYD1_k127_1986139_15 Rhomboid family - - - 0.000000000000000000000000000000000000000003296 165.0
DYD1_k127_1986139_16 NUDIX domain K01515 - 3.6.1.13 0.00000000000000000000000000000001071 128.0
DYD1_k127_1986139_17 6-pyruvoyl tetrahydropterin synthase K01737 - 4.1.2.50,4.2.3.12 0.000000000000000000000001314 109.0
DYD1_k127_1986139_18 Could be involved in insertion of integral membrane proteins into the membrane K08998 - - 0.0000000000000000000001447 99.0
DYD1_k127_1986139_19 PFAM Chemotaxis methyl-accepting receptor, signalling K03406 - - 0.000000000000000000002864 109.0
DYD1_k127_1986139_2 it binds specifically double-stranded DNA at a 9 bp consensus (dnaA box) 5'-TTATC CA A CA A-3'. DnaA binds to ATP and to acidic phospholipids K02313 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003618 565.0
DYD1_k127_1986139_20 Sporulation related domain - - - 0.00000000000000000001138 103.0
DYD1_k127_1986139_21 Ribosomal protein L34 K02914 - - 0.000000000000000004907 84.0
DYD1_k127_1986139_22 - - - - 0.0000000000000003944 83.0
DYD1_k127_1986139_23 RNaseP catalyzes the removal of the 5'-leader sequence from pre-tRNA to produce the mature 5'-terminus. It can also cleave other RNA substrates such as 4.5S RNA. The protein component plays an auxiliary but essential role in vivo by binding to the 5'-leader sequence and broadening the substrate specificity of the ribozyme K03536 - 3.1.26.5 0.0000000000008824 78.0
DYD1_k127_1986139_24 TIGRFAM TonB family protein K03832 - - 0.0001781 50.0
DYD1_k127_1986139_3 Confers DNA tethering and processivity to DNA polymerases and other proteins. Acts as a clamp, forming a ring around DNA (a reaction catalyzed by the clamp-loading complex) which diffuses in an ATP-independent manner freely and bidirectionally along dsDNA. Initially characterized for its ability to contact the catalytic subunit of DNA polymerase III (Pol III), a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria K02338 - 2.7.7.7 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001246 539.0
DYD1_k127_1986139_4 Required for the insertion and or proper folding and or complex formation of integral membrane proteins into the membrane. Involved in integration of membrane proteins that insert both dependently and independently of the Sec translocase complex, as well as at least some lipoproteins. Aids folding of multispanning membrane proteins K03217 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001615 424.0
DYD1_k127_1986139_5 Exhibits a very high intrinsic GTPase hydrolysis rate. Involved in the addition of a carboxymethylaminomethyl (cmnm) group at the wobble position (U34) of certain tRNAs, forming tRNA- cmnm(5)s(2)U34 K03650 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001437 391.0
DYD1_k127_1986139_6 Protein kinase domain K12132 - 2.7.11.1 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000235 337.0
DYD1_k127_1986139_7 Zn-dependent protease - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006452 334.0
DYD1_k127_1986139_8 ECF sigma factor K03088 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004754 307.0
DYD1_k127_1986139_9 Belongs to the D-alanine--D-alanine ligase family K01921 GO:0000270,GO:0003674,GO:0003824,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006022,GO:0006023,GO:0006024,GO:0006807,GO:0008150,GO:0008152,GO:0008716,GO:0009058,GO:0009059,GO:0009252,GO:0009273,GO:0009314,GO:0009628,GO:0009987,GO:0010165,GO:0010212,GO:0016874,GO:0016879,GO:0016881,GO:0030203,GO:0034645,GO:0042546,GO:0043170,GO:0044036,GO:0044038,GO:0044085,GO:0044237,GO:0044249,GO:0044260,GO:0044424,GO:0044444,GO:0044464,GO:0050896,GO:0070589,GO:0071554,GO:0071704,GO:0071840,GO:1901135,GO:1901137,GO:1901564,GO:1901566,GO:1901576 6.3.2.4 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005291 315.0
DYD1_k127_2031994_0 Pyridoxal-phosphate dependent enzyme K01754 - 4.3.1.19 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000001008 306.0
DYD1_k127_205076_0 - - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001189 451.0
DYD1_k127_2052274_0 A type II topoisomerase that negatively supercoils closed circular double-stranded (ds) DNA in an ATP-dependent manner to modulate DNA topology and maintain chromosomes in an underwound state. Negative supercoiling favors strand separation, and DNA replication, transcription, recombination and repair, all of which involve strand separation. Also able to catalyze the interconversion of other topological isomers of dsDNA rings, including catenanes and knotted rings. Type II topoisomerases break and join 2 DNA strands simultaneously in an ATP-dependent manner K02469 - 5.99.1.3 0.0 1128.0
DYD1_k127_2052274_1 Leucyl-tRNA synthetase, Domain 2 K01869 - 6.1.1.4 0.0 1064.0
DYD1_k127_2052274_10 Zinc-binding dehydrogenase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000178 381.0
DYD1_k127_2052274_11 Asparaginase K01444 - 3.5.1.26 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002116 375.0
DYD1_k127_2052274_12 Amidohydrolase family - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001504 358.0
DYD1_k127_2052274_13 Peptidase family M1 domain K01256 - 3.4.11.2 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001726 344.0
DYD1_k127_2052274_14 Aminotransferase class-V - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004005 325.0
DYD1_k127_2052274_15 Pyridoxal-phosphate dependent enzyme K01754 - 4.3.1.19 0.000000000000000000000000000000000000000000000000000000000000000000000000002951 264.0
DYD1_k127_2052274_16 PFAM Glycosyl transferase family 2 - - - 0.00000000000000000000000000000000000000000000000000000000000000000001759 243.0
DYD1_k127_2052274_17 Protein kinase domain K12132 - 2.7.11.1 0.0000000000000000000000000000000000000000000000000000000000000007884 236.0
DYD1_k127_2052274_18 Carboxypeptidase regulatory-like domain - - - 0.00000000000000000000000000000000000000000000000000000000000003848 239.0
DYD1_k127_2052274_19 The pyruvate dehydrogenase complex catalyzes the overall conversion of pyruvate to acetyl-CoA and CO(2) K00161,K11381,K21416 - 1.2.4.1,1.2.4.4 0.000000000000000000000000000000000000000000001485 191.0
DYD1_k127_2052274_2 Secreted protein containing N-terminal Zinc-dependent carboxypeptidase related domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001704 608.0
DYD1_k127_2052274_20 Thioredoxin - - - 0.00000000000000000000000000000000000000000001358 176.0
DYD1_k127_2052274_21 chemotaxis protein K03406 - - 0.0000000000000000000000000000000000009125 160.0
DYD1_k127_2052274_22 DoxX - - - 0.00000000000000000000000000000000573 134.0
DYD1_k127_2052274_23 WD40-like Beta Propeller Repeat K03641 - - 0.0000000000000000000000000000006077 141.0
DYD1_k127_2052274_24 Transcriptional regulator PadR-like family - - - 0.00000000000000000000000000007745 123.0
DYD1_k127_2052274_25 Belongs to the sigma-70 factor family. ECF subfamily K03088 - - 0.0000000000000000000000000003591 125.0
DYD1_k127_2052274_26 hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in linear amides K08281 - 3.5.1.19 0.000000000000000000000000001728 130.0
DYD1_k127_2052274_27 PDZ domain - - - 0.0000000000000000001706 100.0
DYD1_k127_2052274_28 DoxX - - - 0.000000000000000003286 90.0
DYD1_k127_2052274_29 Protein conserved in bacteria - - - 0.0000000000000134 76.0
DYD1_k127_2052274_3 peptidyl-tyrosine sulfation - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001574 534.0
DYD1_k127_2052274_30 PFAM Band 7 protein - - - 0.00000000000003301 72.0
DYD1_k127_2052274_31 SMART Tetratricopeptide repeat - - - 0.0000000000001208 85.0
DYD1_k127_2052274_32 Surface antigen - - - 0.00000000002703 76.0
DYD1_k127_2052274_33 domain, Protein - - - 0.0000002071 64.0
DYD1_k127_2052274_4 diguanylate cyclase K02488 - 2.7.7.65 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000161 486.0
DYD1_k127_2052274_5 Catalyzes the synthesis of beta-nicotinate D- ribonucleotide from nicotinate and 5-phospho-D-ribose 1-phosphate at the expense of ATP K00763 - 6.3.4.21 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000456 457.0
DYD1_k127_2052274_6 Belongs to the sodium neurotransmitter symporter (SNF) (TC 2.A.22) family K03308 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006129 426.0
DYD1_k127_2052274_7 Saccharopine dehydrogenase C-terminal domain K19064 - 1.4.1.18 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001536 415.0
DYD1_k127_2052274_8 Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family K00058,K18916 - 1.1.1.399,1.1.1.95,1.20.1.1 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002321 402.0
DYD1_k127_2052274_9 cellular manganese ion homeostasis - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001123 383.0
DYD1_k127_2075799_0 CarboxypepD_reg-like domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009654 527.0
DYD1_k127_2075799_1 Sodium Bile acid symporter family K03325 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005146 466.0
DYD1_k127_2075799_2 glycosyl transferase group 1 - - - 0.0000000000000000000000000000000000000000000000000000000000000000001404 244.0
DYD1_k127_2075799_3 Parallel beta-helix repeats - - - 0.00000000000000000000000000000000000000000000000000000000000001794 238.0
DYD1_k127_2075799_4 mannose-ethanolamine phosphotransferase activity - - - 0.0000000000000000000000005657 115.0
DYD1_k127_2075799_5 PAP2 superfamily K19302 - 3.6.1.27 0.00000000000000003532 91.0
DYD1_k127_2083531_0 Uncharacterised protein family (UPF0182) K09118 GO:0005575,GO:0005576,GO:0005618,GO:0005623,GO:0005886,GO:0005887,GO:0016020,GO:0016021,GO:0030312,GO:0031224,GO:0031226,GO:0044425,GO:0044459,GO:0044464,GO:0071944 - 5.546e-236 760.0
DYD1_k127_2083531_1 Catalyzes the reversible transfer of the terminal phosphate of ATP to form a long-chain polyphosphate (polyP) K00937 - 2.7.4.1 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004865 626.0
DYD1_k127_2083531_10 M61 glycyl aminopeptidase - - - 0.00000000000000000000000000000000000000000000000000000000000001586 237.0
DYD1_k127_2083531_13 Family 5 K02035,K15580 - - 0.00000000000000000000000000000000000000000000001659 190.0
DYD1_k127_2083531_14 Domain in cystathionine beta-synthase and other proteins. - - - 0.00000000000000000000000000000000000001927 148.0
DYD1_k127_2083531_15 nuclear chromosome segregation - - - 0.00000000000000000000000000000003374 139.0
DYD1_k127_2083531_16 CAAX amino terminal protease K07052 - - 0.0000000000000000000000000001965 124.0
DYD1_k127_2083531_2 - - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002254 571.0
DYD1_k127_2083531_3 Histidine kinase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001816 353.0
DYD1_k127_2083531_4 Belongs to the glutaminase family K01425 - 3.5.1.2 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004268 315.0
DYD1_k127_2083531_5 Dienelactone hydrolase family K01061 - 3.1.1.45 0.000000000000000000000000000000000000000000000000000000000000000000000000000003359 273.0
DYD1_k127_2083531_6 PFAM phospholipase D Transphosphatidylase K06131 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000009865 279.0
DYD1_k127_2083531_7 Predicted membrane protein (DUF2339) - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000003974 274.0
DYD1_k127_2083531_8 Methyladenine glycosylase K01246 - 3.2.2.20 0.00000000000000000000000000000000000000000000000000000000000000000000000303 249.0
DYD1_k127_2083531_9 Amino acid permease - - - 0.00000000000000000000000000000000000000000000000000000000000000000002204 238.0
DYD1_k127_2085180_0 Extracellular solute-binding protein, family 5 K02035 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001801 368.0
DYD1_k127_2085180_1 GDP-mannose 4,6 dehydratase K01784,K17947 - 5.1.3.2,5.1.3.25 0.000000000000000000000000000000131 127.0
DYD1_k127_2088948_0 Aldehyde dehydrogenase family K22187 - - 1.489e-218 683.0
DYD1_k127_2088948_1 Catalyzes the methylthiolation of an aspartic acid residue of ribosomal protein S12 K14441 - 2.8.4.4 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002597 518.0
DYD1_k127_2088948_2 Glutamate-1-semialdehyde aminotransferase K01845 - 5.4.3.8 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003965 472.0
DYD1_k127_2088948_3 Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released K03086 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007753 454.0
DYD1_k127_2088948_4 Homoserine dehydrogenase, NAD binding domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000005132 310.0
DYD1_k127_2088948_5 Stage II sporulation protein K06381 - - 0.00000000000000000000000000000000000000000000000000000000000000007261 241.0
DYD1_k127_2088948_6 Transfers the fatty acyl group on membrane lipoproteins K03820 - - 0.0000000000000000000000000000000000000000000000000000000001603 225.0
DYD1_k127_2088948_7 N-methylhydantoinase A acetone carboxylase, beta subunit K01473 - 3.5.2.14 0.0000000000000000000000000001519 122.0
DYD1_k127_2114035_0 cytochrome C peroxidase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001034 412.0
DYD1_k127_211926_0 - - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004071 401.0
DYD1_k127_211926_1 Amino acid permease K03294 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003281 354.0
DYD1_k127_214554_0 choline dehydrogenase activity - - - 8.035e-263 816.0
DYD1_k127_214554_1 Aldo/keto reductase family - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007483 434.0
DYD1_k127_214554_2 Xylose isomerase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007789 424.0
DYD1_k127_214554_4 - - - - 0.00000000000002895 78.0
DYD1_k127_2175518_0 lysine biosynthetic process via aminoadipic acid - - - 2.011e-220 713.0
DYD1_k127_2175518_1 Zinc-binding dehydrogenase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001034 482.0
DYD1_k127_2175518_10 PFAM Prolyl oligopeptidase, N-terminal beta-propeller domain K01322 - 3.4.21.26 0.0000000000000000000000000000000000000000000000000000000000000000001884 242.0
DYD1_k127_2175518_11 PFAM response regulator receiver K02477 - - 0.000000000000000000000000000000000000000000000000000000000000000001387 252.0
DYD1_k127_2175518_12 DUF35 OB-fold domain, acyl-CoA-associated K07068 - - 0.000000000000000000000000000000002558 132.0
DYD1_k127_2175518_13 Belongs to the class-IV pyridoxal-phosphate-dependent aminotransferase family K00826 - 2.6.1.42 0.000000000001379 77.0
DYD1_k127_2175518_2 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal K01641,K15311 - 2.3.3.10 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002638 401.0
DYD1_k127_2175518_3 phosphoglycerate mutase activity K01834 GO:0003674,GO:0003824,GO:0004619,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005975,GO:0005996,GO:0006006,GO:0006082,GO:0006090,GO:0006091,GO:0006094,GO:0006096,GO:0006109,GO:0006139,GO:0006140,GO:0006163,GO:0006164,GO:0006165,GO:0006725,GO:0006732,GO:0006733,GO:0006753,GO:0006754,GO:0006757,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0009056,GO:0009058,GO:0009108,GO:0009117,GO:0009123,GO:0009124,GO:0009126,GO:0009127,GO:0009132,GO:0009135,GO:0009141,GO:0009142,GO:0009144,GO:0009145,GO:0009150,GO:0009152,GO:0009156,GO:0009161,GO:0009165,GO:0009166,GO:0009167,GO:0009168,GO:0009179,GO:0009185,GO:0009199,GO:0009201,GO:0009205,GO:0009206,GO:0009259,GO:0009260,GO:0009894,GO:0009987,GO:0010675,GO:0016051,GO:0016052,GO:0016053,GO:0016310,GO:0016853,GO:0016866,GO:0016868,GO:0017144,GO:0018130,GO:0019219,GO:0019220,GO:0019222,GO:0019318,GO:0019319,GO:0019359,GO:0019362,GO:0019363,GO:0019438,GO:0019439,GO:0019637,GO:0019693,GO:0019752,GO:0031323,GO:0031329,GO:0032787,GO:0034248,GO:0034404,GO:0034641,GO:0034654,GO:0034655,GO:0042866,GO:0043436,GO:0043455,GO:0043456,GO:0043470,GO:0043471,GO:0044237,GO:0044238,GO:0044248,GO:0044249,GO:0044270,GO:0044271,GO:0044281,GO:0044283,GO:0044424,GO:0044444,GO:0044464,GO:0046031,GO:0046034,GO:0046364,GO:0046390,GO:0046394,GO:0046434,GO:0046483,GO:0046496,GO:0046538,GO:0046700,GO:0046939,GO:0050789,GO:0050794,GO:0051171,GO:0051174,GO:0051186,GO:0051188,GO:0051193,GO:0051196,GO:0055086,GO:0060255,GO:0062012,GO:0065007,GO:0071704,GO:0072330,GO:0072521,GO:0072522,GO:0072524,GO:0072525,GO:0080090,GO:0090407,GO:1901135,GO:1901137,GO:1901292,GO:1901293,GO:1901360,GO:1901361,GO:1901362,GO:1901564,GO:1901566,GO:1901575,GO:1901576,GO:1902031 5.4.2.11 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004221 373.0
DYD1_k127_2175518_4 Belongs to the thiolase family K00626 - 2.3.1.9 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002343 381.0
DYD1_k127_2175518_5 PFAM Coenzyme A transferase K01039 - 2.8.3.12 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003487 374.0
DYD1_k127_2175518_6 Coenzyme A transferase K01040 - 2.8.3.12 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000002825 314.0
DYD1_k127_2175518_7 Anthranilate synthase K01665 GO:0000162,GO:0000287,GO:0003674,GO:0003824,GO:0004049,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005950,GO:0006082,GO:0006520,GO:0006568,GO:0006575,GO:0006576,GO:0006586,GO:0006725,GO:0006732,GO:0006760,GO:0006807,GO:0008150,GO:0008152,GO:0008483,GO:0008652,GO:0009058,GO:0009072,GO:0009073,GO:0009108,GO:0009308,GO:0009309,GO:0009396,GO:0009987,GO:0016053,GO:0016740,GO:0016769,GO:0016829,GO:0016830,GO:0016833,GO:0018130,GO:0019438,GO:0019752,GO:0032991,GO:0034641,GO:0042398,GO:0042401,GO:0042430,GO:0042435,GO:0042558,GO:0042559,GO:0043167,GO:0043169,GO:0043436,GO:0043603,GO:0043604,GO:0044106,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0044283,GO:0044424,GO:0044444,GO:0044464,GO:0046219,GO:0046394,GO:0046483,GO:0046653,GO:0046654,GO:0046820,GO:0046872,GO:0051186,GO:0051188,GO:0071704,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576,GO:1901605,GO:1901607,GO:1902494 2.6.1.85 0.000000000000000000000000000000000000000000000000000000000000000000000000000000006201 284.0
DYD1_k127_2175518_8 Bacterial regulatory proteins, tetR family - - - 0.000000000000000000000000000000000000000000000000000000000000000000000008143 248.0
DYD1_k127_2175518_9 Histidine kinase K08082 - 2.7.13.3 0.0000000000000000000000000000000000000000000000000000000000000000000001528 256.0
DYD1_k127_2175727_0 RecQ zinc-binding K03654 - 3.6.4.12 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002562 392.0
DYD1_k127_2175727_1 ABC transporter transmembrane region K11085 - - 0.00000000000000000000001444 101.0
DYD1_k127_2224309_0 Domain of unknown function (DUF4162) K01990 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000008688 299.0
DYD1_k127_2224309_1 COG1668 ABC-type Na efflux pump, permease component K01992 - - 0.000000000000000000000000000000000000000000001072 184.0
DYD1_k127_2224309_2 Late embryogenesis abundant protein - - - 0.000000000000006922 82.0
DYD1_k127_2258652_0 BadF/BadG/BcrA/BcrD ATPase family - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001748 310.0
DYD1_k127_2258652_1 PFAM ATPase, BadF BadG BcrA BcrD type - - - 0.0000000000000000000000000000000000000000000000000000000000003334 233.0
DYD1_k127_2258652_2 alcohol dehydrogenase K00001,K13953 - 1.1.1.1 0.00000000001205 67.0
DYD1_k127_2258652_3 - - - - 0.0007059 49.0
DYD1_k127_2285686_0 Type II secretory pathway, ATPase PulE Tfp pilus assembly pathway, ATPase PilB - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001208 466.0
DYD1_k127_2285686_1 - - - - 0.000000002379 66.0
DYD1_k127_2285686_2 PFAM ATP-binding region ATPase domain protein - - - 0.00000005674 59.0
DYD1_k127_2309809_0 2-oxoglutarate dehydrogenase C-terminal K00164 - 1.2.4.2 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001111 471.0
DYD1_k127_2309809_1 thiolester hydrolase activity - - - 0.00000000000000000002375 99.0
DYD1_k127_2323581_0 Oxidoreductase required for the transfer of electrons from pyruvate to flavodoxin K03737 - 1.2.7.1 0.0 1619.0
DYD1_k127_2323581_1 Catalyzes the conversion of dihydroorotate to orotate K00226 - 1.3.98.1 0.00000000000000000000000000000000000000000000000000000000000000000000000177 267.0
DYD1_k127_2323581_2 - - - - 0.0000000000000000000000000000000004319 147.0
DYD1_k127_2323581_3 - - - - 0.0000000008236 63.0
DYD1_k127_2340040_0 PFAM Transposase, Mutator K07493 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002075 388.0
DYD1_k127_2349695_0 Tryptophan halogenase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003553 480.0
DYD1_k127_2349695_1 Tryptophan halogenase K16033 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004096 376.0
DYD1_k127_2349695_2 conserved protein (COG2071) K09166 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000005491 299.0
DYD1_k127_2349695_3 Belongs to the LOG family K06966 - 3.2.2.10 0.000000000000000000000000000000000000000000000000000000000000000000004734 239.0
DYD1_k127_2349695_4 Cytochrome C oxidase, cbb3-type, subunit III - - - 0.00000000000000000000000000000000000000000000000659 183.0
DYD1_k127_2349695_5 Thioesterase-like superfamily K07107 - - 0.0000000000000000000000000000000000000005159 158.0
DYD1_k127_2349695_6 dUTPase K01520 - 3.6.1.23 0.00000000000000000001174 100.0
DYD1_k127_2349695_7 - - - - 0.0000000000000139 81.0
DYD1_k127_237466_0 COG1014 Pyruvate ferredoxin oxidoreductase and related 2-oxoacid ferredoxin oxidoreductases, gamma subunit K00174 - 1.2.7.11,1.2.7.3 1.744e-262 825.0
DYD1_k127_237466_1 Insulinase (Peptidase family M16) - - - 9.1e-210 662.0
DYD1_k127_237466_2 Peptidase, M16 - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003743 515.0
DYD1_k127_237466_3 Protein tyrosine kinase K12132 - 2.7.11.1 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003439 518.0
DYD1_k127_237466_4 PFAM thiamine pyrophosphate protein domain protein TPP-binding K00175 - 1.2.7.11,1.2.7.3 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005677 470.0
DYD1_k127_237466_5 Prolyl oligopeptidase family K01303 - 3.4.19.1 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004258 426.0
DYD1_k127_2391234_0 Histone methylation protein DOT1 - - - 0.0000000000000000000000000000000000000000000000000006368 196.0
DYD1_k127_2391234_1 DNA repair - GO:0001510,GO:0003674,GO:0003824,GO:0006139,GO:0006396,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0008168,GO:0008173,GO:0009451,GO:0009987,GO:0010467,GO:0016070,GO:0016740,GO:0016741,GO:0032259,GO:0034641,GO:0036260,GO:0036261,GO:0043170,GO:0043412,GO:0043414,GO:0044237,GO:0044238,GO:0044260,GO:0046483,GO:0071164,GO:0071704,GO:0090304,GO:0140098,GO:1901360 - 0.00000000000000000000000000000000000000000000000001954 187.0
DYD1_k127_2391234_2 Histone methylation protein DOT1 - - - 0.0005817 44.0
DYD1_k127_2400669_0 Belongs to the CDP-alcohol phosphatidyltransferase class-I family K07281,K07291 - 2.7.7.74,2.7.8.34 0.0000000000000000000000000000000000000000000000000000000000004208 230.0
DYD1_k127_2400669_1 transferase activity, transferring glycosyl groups - - - 0.0000000000000000000000000000000000000000001609 175.0
DYD1_k127_2400669_2 Polysaccharide biosynthesis protein - - - 0.00000000000000000000000000000000000000006833 170.0
DYD1_k127_2400669_3 Part of the outer membrane protein assembly complex, which is involved in assembly and insertion of beta-barrel proteins into the outer membrane - - - 0.0000000004385 72.0
DYD1_k127_2408635_0 Methyltransferase required for the conversion of demethylmenaquinol (DMKH2) to menaquinol (MKH2) K03183 - 2.1.1.163,2.1.1.201 0.0000000000000000000000000000000000000000000000000000000000000000000000000000001558 281.0
DYD1_k127_2408635_1 ECF sigma factor K03088 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000001916 264.0
DYD1_k127_2408635_2 Polymer-forming cytoskeletal - - - 0.00000000000000000000003221 115.0
DYD1_k127_2408635_3 Pfam S-adenosyl-l-methionine hydroxide adenosyltransferase K22205 - - 0.0000000003152 63.0
DYD1_k127_2408635_4 N-terminal domain of toast_rack, DUF2154 - - - 0.00000093 61.0
DYD1_k127_2409666_0 Calcineurin-like phosphoesterase K01077 - 3.1.3.1 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000003358 287.0
DYD1_k127_2409666_1 Phosphorylation of dTMP to form dTDP in both de novo and salvage pathways of dTTP synthesis - - - 0.00000000000000000000000000000000297 138.0
DYD1_k127_2424749_0 Beta-eliminating lyase K00639,K00652 GO:0005575,GO:0005618,GO:0005623,GO:0030312,GO:0044464,GO:0071944 2.3.1.29,2.3.1.47 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005202 481.0
DYD1_k127_2424749_1 acetyltransferase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004004 352.0
DYD1_k127_2424749_2 3-beta hydroxysteroid dehydrogenase isomerase - - - 0.000000000000000000000000000000000000000000000000002502 200.0
DYD1_k127_2424749_3 TIGRFAM M6 family metalloprotease domain - - - 0.00000000000000000000000000000000000000000002247 185.0
DYD1_k127_2424749_4 phosphatidate phosphatase activity K00901,K01096,K19302 - 2.7.1.107,3.1.3.27,3.1.3.4,3.1.3.81,3.6.1.27 0.0000000000000000000000001934 119.0
DYD1_k127_2426738_0 Sodium:neurotransmitter symporter family - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004649 422.0
DYD1_k127_2426738_1 Integral membrane protein TerC family K05794 GO:0005575,GO:0005623,GO:0005886,GO:0016020,GO:0044464,GO:0071944 - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007297 368.0
DYD1_k127_2426738_2 Periplasmic component of the Tol biopolymer transport system - - - 0.0000000000000000000000000000000000000000000000000000000001181 216.0
DYD1_k127_2426738_3 neurotransmitter:sodium symporter activity K03308 - - 0.0000000000000000000000000000000000005998 147.0
DYD1_k127_2444862_0 PAS fold - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009112 424.0
DYD1_k127_2444862_1 ABC-type branched-chain amino acid transport systems, periplasmic component K01999 - - 0.000000000000000000000000000000000000000000000000000000000000000000009093 250.0
DYD1_k127_2455705_0 Transfers the N-acyl diglyceride group on what will become the N-terminal cysteine of membrane lipoproteins K13292 - - 0.0000004958 55.0
DYD1_k127_2455705_1 Ami_2 K01446 GO:0001775,GO:0001817,GO:0001818,GO:0001906,GO:0002218,GO:0002221,GO:0002252,GO:0002253,GO:0002263,GO:0002274,GO:0002275,GO:0002283,GO:0002366,GO:0002376,GO:0002443,GO:0002444,GO:0002446,GO:0002682,GO:0002683,GO:0002684,GO:0002694,GO:0002695,GO:0002697,GO:0002698,GO:0002757,GO:0002758,GO:0002764,GO:0003674,GO:0005488,GO:0005539,GO:0005575,GO:0005576,GO:0005622,GO:0005623,GO:0005737,GO:0006810,GO:0006887,GO:0006950,GO:0006952,GO:0006955,GO:0006959,GO:0007154,GO:0007165,GO:0008150,GO:0008329,GO:0009595,GO:0009605,GO:0009607,GO:0009617,GO:0009987,GO:0012505,GO:0016019,GO:0016045,GO:0016192,GO:0019730,GO:0023052,GO:0030139,GO:0030141,GO:0031341,GO:0031343,GO:0031347,GO:0031348,GO:0031349,GO:0031410,GO:0031640,GO:0031974,GO:0031982,GO:0031983,GO:0032101,GO:0032102,GO:0032649,GO:0032689,GO:0032814,GO:0032815,GO:0032823,GO:0032824,GO:0032826,GO:0032827,GO:0032940,GO:0034774,GO:0035580,GO:0035821,GO:0036230,GO:0038023,GO:0038187,GO:0040007,GO:0042119,GO:0042268,GO:0042581,GO:0042742,GO:0042749,GO:0042752,GO:0042834,GO:0043207,GO:0043226,GO:0043227,GO:0043229,GO:0043233,GO:0043299,GO:0043312,GO:0043900,GO:0043902,GO:0044110,GO:0044116,GO:0044117,GO:0044364,GO:0044403,GO:0044419,GO:0044422,GO:0044424,GO:0044433,GO:0044444,GO:0044446,GO:0044464,GO:0045055,GO:0045087,GO:0045088,GO:0045089,GO:0045187,GO:0045321,GO:0045335,GO:0045595,GO:0045596,GO:0045619,GO:0045620,GO:0045919,GO:0046903,GO:0048518,GO:0048519,GO:0048522,GO:0048523,GO:0048583,GO:0048584,GO:0048585,GO:0050727,GO:0050728,GO:0050776,GO:0050777,GO:0050778,GO:0050789,GO:0050793,GO:0050794,GO:0050795,GO:0050830,GO:0050865,GO:0050866,GO:0050896,GO:0051093,GO:0051179,GO:0051234,GO:0051239,GO:0051241,GO:0051249,GO:0051250,GO:0051606,GO:0051704,GO:0051707,GO:0051709,GO:0051710,GO:0051712,GO:0051714,GO:0051716,GO:0060089,GO:0060205,GO:0061844,GO:0065007,GO:0070013,GO:0070820,GO:0071682,GO:0080134,GO:0097013,GO:0097367,GO:0097708,GO:0098542,GO:0098543,GO:0098581,GO:0099503,GO:1902105,GO:1902106,GO:1903706,GO:1903707,GO:1904724,GO:2000026 - 0.00001193 58.0
DYD1_k127_246947_0 Dipeptidyl peptidase IV (DPP IV) N-terminal region K01278 - 3.4.14.5 6.127e-196 637.0
DYD1_k127_246947_1 Catalyzes the reversible transfer of the terminal phosphate of ATP to form a long-chain polyphosphate (polyP) K00937 - 2.7.4.1 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002521 481.0
DYD1_k127_246947_2 efflux transmembrane transporter activity - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002579 475.0
DYD1_k127_246947_3 efflux transmembrane transporter activity - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001405 423.0
DYD1_k127_246947_4 Putative neutral zinc metallopeptidase K07054 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003069 323.0
DYD1_k127_246947_5 Calcineurin-like phosphoesterase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000005687 276.0
DYD1_k127_246947_6 PFAM GGDEF domain containing protein - - - 0.0000000000000000000000000000000000000000000000000000000000000004861 229.0
DYD1_k127_246947_7 hydrolases of the HAD superfamily - - - 0.00000000000000000000000000000000000000000000000001145 190.0
DYD1_k127_246947_8 Protein of unknown function, DUF481 K07283 - - 0.000000002218 69.0
DYD1_k127_2469691_0 Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain K03520 - 1.2.5.3 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004771 332.0
DYD1_k127_2486856_0 Couples transcription and DNA repair by recognizing RNA polymerase (RNAP) stalled at DNA lesions. Mediates ATP-dependent release of RNAP and its truncated transcript from the DNA, and recruitment of nucleotide excision repair machinery to the damaged site K03723 - - 2.699e-300 936.0
DYD1_k127_2486856_1 Elongation factor G C-terminus K06207 - - 1.667e-260 819.0
DYD1_k127_2486856_2 Hemolysins and related proteins containing CBS domains - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000696 343.0
DYD1_k127_2486856_3 Pyridoxal phosphate biosynthetic protein PdxA K00097 - 1.1.1.262 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002473 325.0
DYD1_k127_2486856_4 SurA N-terminal domain K03771 - 5.2.1.8 0.00000000000000000000000000000000000000000000000000000000000000000000000000000004921 284.0
DYD1_k127_2486856_5 cation diffusion facilitator family transporter K16264 GO:0000041,GO:0003674,GO:0005215,GO:0005385,GO:0005575,GO:0005623,GO:0005886,GO:0006810,GO:0006811,GO:0006812,GO:0006829,GO:0008150,GO:0008324,GO:0015075,GO:0015318,GO:0016020,GO:0022857,GO:0022890,GO:0030001,GO:0034220,GO:0044464,GO:0046873,GO:0046915,GO:0051179,GO:0051234,GO:0055085,GO:0070838,GO:0071577,GO:0071944,GO:0072509,GO:0072511,GO:0098655,GO:0098660,GO:0098662 - 0.000000000000000000000000000000000000000000000000000000000000000000000000001718 264.0
DYD1_k127_2486856_6 Peptidylprolyl isomerase K03770 - 5.2.1.8 0.0000239 57.0
DYD1_k127_2528243_0 AMP-dependent synthetase - - - 0.0 1564.0
DYD1_k127_2528243_1 Amino acid adenylation domain - - - 0.0 1072.0
DYD1_k127_2528243_10 Outer membrane protein beta-barrel domain - - - 0.0000000000000000002536 98.0
DYD1_k127_2528243_11 Outer membrane protein beta-barrel domain - - - 0.000000000000000001491 93.0
DYD1_k127_2528243_12 ATP-grasp domain K09181 - - 0.00000000002953 73.0
DYD1_k127_2528243_13 ParB-like nuclease domain K03497 - - 0.0000001544 53.0
DYD1_k127_2528243_2 cytochrome c peroxidase K00428 - 1.11.1.5 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003013 503.0
DYD1_k127_2528243_3 Serine/threonine phosphatases, family 2C, catalytic domain K01090,K20074 - 3.1.3.16 0.00000000000000000000000000000000000000000000000000000000000001947 226.0
DYD1_k127_2528243_4 NUDIX domain - - - 0.000000000000000000000000000000000000000000000000000501 188.0
DYD1_k127_2528243_5 Serine aminopeptidase, S33 - - - 0.000000000000000000000000000000000000000000329 169.0
DYD1_k127_2528243_6 Alpha/beta hydrolase family - - - 0.00000000000000000000000000000000000000001889 165.0
DYD1_k127_2528243_7 Belongs to the P-Pant transferase superfamily K06133 GO:0003674,GO:0003824,GO:0006082,GO:0006520,GO:0006553,GO:0006807,GO:0008150,GO:0008152,GO:0008652,GO:0008897,GO:0009058,GO:0009066,GO:0009067,GO:0009085,GO:0009987,GO:0016053,GO:0016740,GO:0016772,GO:0016780,GO:0019752,GO:0019878,GO:0043436,GO:0044237,GO:0044238,GO:0044249,GO:0044281,GO:0044283,GO:0046394,GO:0071704,GO:1901564,GO:1901566,GO:1901576,GO:1901605,GO:1901607 - 0.00000000000000000000000000000000000006509 156.0
DYD1_k127_2528243_8 glyoxalase - - - 0.000000000000000000000000000000000002663 146.0
DYD1_k127_2528243_9 PFAM GCN5-related N-acetyltransferase - - - 0.00000000000000000000000000000001612 135.0
DYD1_k127_2539941_0 ASPIC and UnbV - - - 0.0 1153.0
DYD1_k127_2539941_1 N-Acetylmuramoyl-L-alanine amidase K01187 - 3.2.1.20 9.684e-286 893.0
DYD1_k127_2539941_2 ASPIC and UnbV - - - 0.00000000000000000000000000000000000000000000000000000000000000000000001182 246.0
DYD1_k127_2539941_3 transport - - - 0.00000000000000000000000000000009528 134.0
DYD1_k127_2541161_0 TIGRFAM amidase, hydantoinase carbamoylase family K06016 - 3.5.1.6,3.5.1.87 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003677 503.0
DYD1_k127_2541161_1 Domain of unknown function (DUF4399) - - - 0.000000000000000000007915 98.0
DYD1_k127_2616210_0 Catalyzes the phosphorylation of the position 2 hydroxy group of 4-diphosphocytidyl-2C-methyl-D-erythritol K00919 - 2.7.1.148 0.000000000000000000000000000000000000000000000007746 184.0
DYD1_k127_2625495_0 DALR_2 K01883 - 6.1.1.16 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002628 487.0
DYD1_k127_2625495_1 This protein promotes the GTP-dependent binding of aminoacyl-tRNA to the A-site of ribosomes during protein biosynthesis K02358 - - 0.0000000000000001177 80.0
DYD1_k127_2625495_2 - - - - 0.0000000000005705 70.0
DYD1_k127_2625495_3 ABC transporter K01990 - - 0.00003133 51.0
DYD1_k127_2627534_0 PFAM fumarate reductase succinate dehydrogenase flavoprotein domain protein K00239,K00244,K00278 GO:0000104,GO:0003674,GO:0003824,GO:0005575,GO:0005622,GO:0005623,GO:0005886,GO:0006091,GO:0006113,GO:0008150,GO:0008152,GO:0009055,GO:0009061,GO:0009987,GO:0015980,GO:0016020,GO:0016491,GO:0016627,GO:0022900,GO:0032991,GO:0044237,GO:0044424,GO:0044425,GO:0044459,GO:0044464,GO:0045273,GO:0045274,GO:0045283,GO:0045284,GO:0045333,GO:0055114,GO:0070469,GO:0070470,GO:0071944,GO:0098796,GO:0098797,GO:0098803 1.3.5.1,1.3.5.4,1.4.3.16 1.071e-284 884.0
DYD1_k127_2627534_1 Succinate dehydrogenase fumarate reductase K00240 - 1.3.5.1,1.3.5.4 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002292 379.0
DYD1_k127_2627534_2 DinB superfamily - - - 0.00000000000000000000000000008457 123.0
DYD1_k127_2627534_4 Seems to be involved in the anchoring of the catalytic components of the fumarate reductase complex to the cytoplasmic membrane K00247 - - 0.0000000000000000000000001756 115.0
DYD1_k127_2627534_5 Seems to be involved in the anchoring of the catalytic components of the fumarate reductase complex to the cytoplasmic membrane K00246 - - 0.0000000000000000000000008298 111.0
DYD1_k127_2627534_6 Has lipid A 3-O-deacylase activity. Hydrolyzes the ester bond at the 3 position of lipid A, a bioactive component of lipopolysaccharide (LPS), thereby releasing the primary fatty acyl moiety K12980 - - 0.000000000000000003924 89.0
DYD1_k127_2627534_7 - - - - 0.00000000000000002416 85.0
DYD1_k127_2628150_0 Putative restriction endonuclease - - - 0.000000000000000000000000000000000000005882 153.0
DYD1_k127_2628150_1 SpoVT / AbrB like domain - - - 0.00000000000000000000000001886 114.0
DYD1_k127_2628150_2 Toxic component of a toxin-antitoxin (TA) module. An RNase - - - 0.000000000000000000000002428 111.0
DYD1_k127_2628150_3 Helix-turn-helix domain - - - 0.0000000000000000000001949 100.0
DYD1_k127_2628150_4 PIN domain - - - 0.000000000000000000002371 99.0
DYD1_k127_2628150_5 Competence protein ComEC K02238 - - 0.000000000001905 79.0
DYD1_k127_2628150_6 Antitoxin Phd_YefM, type II toxin-antitoxin system - - - 0.00000000002351 68.0
DYD1_k127_2628150_7 - - - - 0.00001003 54.0
DYD1_k127_2628150_8 RES - - - 0.00001508 53.0
DYD1_k127_2628150_9 Protein of unknown function (DUF2384) - - - 0.0002089 49.0
DYD1_k127_2644810_0 Belongs to the FAD-dependent glycerol-3-phosphate dehydrogenase family K00111 - 1.1.5.3 5.813e-218 691.0
DYD1_k127_2644810_1 COG0457 FOG TPR repeat - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001056 415.0
DYD1_k127_2644810_2 peptidyl-tyrosine sulfation K13992 - - 0.0000000000000000000000000000000000000000000000000000000007819 211.0
DYD1_k127_2644810_3 DNA-templated transcription, initiation K02405 - - 0.0000000000000000000000000000000000000000000000000003881 197.0
DYD1_k127_2644810_4 COG3263 NhaP-type Na H and K H K11105 - - 0.0000000000000000000000000000000000000000000000000218 190.0
DYD1_k127_2644810_5 - - - - 0.000000000000000000000000000000000000000002626 173.0
DYD1_k127_2644810_6 Transporter associated domain - - - 0.0000000000000000000000000000000000007502 153.0
DYD1_k127_2644810_7 SnoaL-like domain - - - 0.0000000000000000000007207 102.0
DYD1_k127_2644810_8 Bacterial Ig-like domain 2 - - - 0.0000000007282 71.0
DYD1_k127_2644810_9 Protein tyrosine kinase K12132 - 2.7.11.1 0.00005235 51.0
DYD1_k127_2652434_0 TIGRFAM DNA polymerase III, alpha subunit K02337,K14162 - 2.7.7.7 5.784e-314 998.0
DYD1_k127_2652434_1 Produces ATP from ADP in the presence of a proton gradient across the membrane. The catalytic sites are hosted primarily by the beta subunits K02112 - 3.6.3.14 3.549e-253 786.0
DYD1_k127_2652434_10 Produces ATP from ADP in the presence of a proton gradient across the membrane K02114 - - 0.000000000000000000004419 104.0
DYD1_k127_2652434_11 domain, Protein K01179,K07260,K13735 - 3.2.1.4,3.4.17.14 0.00000000000000000001628 104.0
DYD1_k127_2652434_12 - - - - 0.00000006585 63.0
DYD1_k127_2652434_2 Is required not only for elongation of protein synthesis but also for the initiation of all mRNA translation through initiator tRNA(fMet) aminoacylation K01874 GO:0003674,GO:0003824,GO:0004812,GO:0004825,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005886,GO:0006082,GO:0006139,GO:0006399,GO:0006412,GO:0006418,GO:0006431,GO:0006518,GO:0006520,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0016020,GO:0016070,GO:0016874,GO:0016875,GO:0019538,GO:0019752,GO:0034641,GO:0034645,GO:0034660,GO:0040007,GO:0043038,GO:0043039,GO:0043043,GO:0043170,GO:0043436,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044281,GO:0044424,GO:0044464,GO:0046483,GO:0071704,GO:0071944,GO:0090304,GO:0140098,GO:0140101,GO:1901360,GO:1901564,GO:1901566,GO:1901576 6.1.1.10 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001804 426.0
DYD1_k127_2652434_3 Component of the acetyl coenzyme A carboxylase (ACC) complex. First, biotin carboxylase catalyzes the carboxylation of biotin on its carrier protein (BCCP) and then the CO(2) group is transferred by the carboxyltransferase to acetyl-CoA to form malonyl-CoA K01962,K01963 - 2.1.3.15,6.4.1.2 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001709 392.0
DYD1_k127_2652434_4 PSP1 C-terminal conserved region - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003186 350.0
DYD1_k127_2652434_5 3-Deoxy-D-manno-octulosonic-acid transferase (kdotransferase) K02527 - 2.4.99.12,2.4.99.13,2.4.99.14,2.4.99.15 0.000000000000000000000000000000000000000000000000000000001189 218.0
DYD1_k127_2652434_6 CAAX protease self-immunity K07052 - - 0.000000000000000000000000000000000000000000000001768 187.0
DYD1_k127_2652434_7 Peptidase family M23 - - - 0.0000000000000000000000000000000000000006103 164.0
DYD1_k127_2652434_8 Produces ATP from ADP in the presence of a proton gradient across the membrane. The gamma chain is believed to be important in regulating ATPase activity and the flow of protons through the CF(0) complex K02115 - - 0.0000000000000000000000000000000000000639 145.0
DYD1_k127_2652434_9 PFAM DSBA oxidoreductase - - - 0.0000000000000000000000000000000004826 140.0
DYD1_k127_2658659_0 Glycosyl hydrolases family 15 - - - 2.335e-236 746.0
DYD1_k127_2658659_1 PFAM FAD-dependent pyridine nucleotide-disulphide oxidoreductase K03885,K15977 - 1.6.99.3 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004402 362.0
DYD1_k127_2658659_2 - - - - 0.0000000000000000000000000000000000000000000000000000000001152 208.0
DYD1_k127_2658659_4 Catalyzes the oxidation of glucose 6-phosphate to 6- phosphogluconolactone K00036 - 1.1.1.363,1.1.1.49 0.00000000000000000000000007172 112.0
DYD1_k127_2658659_5 HxlR-like helix-turn-helix - - - 0.0000000000000000000000387 104.0
DYD1_k127_2658659_6 Copper binding proteins, plastocyanin/azurin family - - - 0.000000000000007514 82.0
DYD1_k127_2692971_0 Carboxypeptidase regulatory-like domain - - - 0.000000000000000000000000003516 130.0
DYD1_k127_2692971_1 polysaccharide deacetylase - - - 0.00000000000000000002298 94.0
DYD1_k127_2692971_2 - - - - 0.00002858 55.0
DYD1_k127_2704285_0 Glucose / Sorbosone dehydrogenase K21430 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001232 527.0
DYD1_k127_2714249_0 MacB-like periplasmic core domain - - - 4.547e-319 996.0
DYD1_k127_2714249_1 2Fe-2S -binding domain protein K07302 - 1.3.99.16 0.0000000000000007912 82.0
DYD1_k127_2714249_2 - - - - 0.00000109 53.0
DYD1_k127_2781849_0 ATP-dependent specificity component of the Clp protease. It directs the protease to specific substrates. Can perform chaperone functions in the absence of ClpP K03544 - - 1.863e-208 654.0
DYD1_k127_2781849_1 Involved in protein export. Acts as a chaperone by maintaining the newly synthesized protein in an open conformation. Functions as a peptidyl-prolyl cis-trans isomerase K03545 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002413 353.0
DYD1_k127_2781849_2 Cleaves peptides in various proteins in a process that requires ATP hydrolysis. Has a chymotrypsin-like activity. Plays a major role in the degradation of misfolded proteins K01358 - 3.4.21.92 0.000000000000000000000000000000000000000000000000000000000000000000000000000002207 267.0
DYD1_k127_2781849_3 Necessary for normal cell division and for the maintenance of normal septation K03978 - - 0.00000000000000000000000000000000000004295 159.0
DYD1_k127_2781849_4 CheC-like family K03410 - - 0.0000000000000000000000000006452 121.0
DYD1_k127_2781849_5 metal cluster binding K19302 GO:0005575,GO:0005623,GO:0005886,GO:0016020,GO:0044464,GO:0071944 3.6.1.27 0.0000000000000000000001858 104.0
DYD1_k127_2781849_6 - - - - 0.0000000000000000000002785 110.0
DYD1_k127_2781849_7 CDP-alcohol phosphatidyltransferase - - - 0.000000005855 66.0
DYD1_k127_2797909_0 Beta-lactamase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004476 339.0
DYD1_k127_2797909_1 Transposase IS200 like - - - 0.00000000000000006401 85.0
DYD1_k127_2826635_0 Catalyzes the formation of the alpha-1,6-glucosidic linkages in glycogen by scission of a 1,4-alpha-linked oligosaccharide from growing alpha-1,4-glucan chains and the subsequent attachment of the oligosaccharide to the alpha-1,6 position K00700 - 2.4.1.18 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005816 572.0
DYD1_k127_2826635_1 DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates K03040 - 2.7.7.6 0.00000000000000000000000000001374 120.0
DYD1_k127_2852898_0 Domain of unknown function (DUF4111) K00984 - 2.7.7.47 0.000000000000000000000000000000000000000000000000006677 190.0
DYD1_k127_2852898_1 oxidation-reduction process - - - 0.00000000000000000000000000000000008208 137.0
DYD1_k127_2854867_0 Peptidase S46 - GO:0003674,GO:0003824,GO:0004177,GO:0005488,GO:0005575,GO:0005576,GO:0005623,GO:0006508,GO:0006518,GO:0006807,GO:0008150,GO:0008152,GO:0008233,GO:0008236,GO:0008238,GO:0008239,GO:0009056,GO:0009279,GO:0009986,GO:0009987,GO:0016020,GO:0016049,GO:0016787,GO:0017171,GO:0019538,GO:0019867,GO:0030154,GO:0030312,GO:0030313,GO:0031975,GO:0032502,GO:0033218,GO:0034641,GO:0040007,GO:0042277,GO:0043170,GO:0043171,GO:0043603,GO:0044237,GO:0044238,GO:0044248,GO:0044462,GO:0044464,GO:0048468,GO:0048588,GO:0048589,GO:0048856,GO:0048869,GO:0070011,GO:0071704,GO:0071944,GO:0140096,GO:1901564,GO:1901565,GO:1901575 - 1.47e-218 703.0
DYD1_k127_2854867_1 Protein of unknown function (DUF819) - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000795 567.0
DYD1_k127_2854867_2 Releases the N-terminal proline from various substrates K01259 - 3.4.11.5 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001351 315.0
DYD1_k127_2854867_3 WD40-like Beta Propeller Repeat K03641 - - 0.0000000000000000000000000000000000000000000000000000000000000002301 233.0
DYD1_k127_2854867_4 WD40-like Beta Propeller Repeat K03641 - - 0.00000000000000000000000000000000000000000000000007452 193.0
DYD1_k127_2854867_5 - K00003,K00058,K01754,K04767 - 1.1.1.3,1.1.1.399,1.1.1.95,4.3.1.19 0.0000000000000000000000000000000000177 139.0
DYD1_k127_2881082_0 oxidoreductase activity, acting on the CH-NH group of donors, quinone or similar compound as acceptor K00311 GO:0003674,GO:0003824,GO:0004174,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005739,GO:0005740,GO:0005743,GO:0005759,GO:0006091,GO:0008150,GO:0008152,GO:0009055,GO:0009987,GO:0015980,GO:0016020,GO:0016021,GO:0016491,GO:0016645,GO:0016649,GO:0016722,GO:0017133,GO:0019866,GO:0022900,GO:0022904,GO:0031090,GO:0031224,GO:0031300,GO:0031301,GO:0031304,GO:0031305,GO:0031966,GO:0031967,GO:0031974,GO:0031975,GO:0032592,GO:0032991,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0043233,GO:0043783,GO:0044237,GO:0044422,GO:0044424,GO:0044425,GO:0044429,GO:0044444,GO:0044446,GO:0044455,GO:0044464,GO:0045251,GO:0045333,GO:0048037,GO:0048038,GO:0048039,GO:0051536,GO:0051539,GO:0051540,GO:0055114,GO:0070013,GO:0098573,GO:0098798,GO:1902494,GO:1990204 1.5.5.1 1.99e-218 690.0
DYD1_k127_2881082_1 DNA ligase that catalyzes the formation of phosphodiester linkages between 5'-phosphoryl and 3'-hydroxyl groups in double-stranded DNA using NAD as a coenzyme and as the energy source for the reaction. It is essential for DNA replication and repair of damaged DNA K01972 GO:0003674,GO:0003824,GO:0003909,GO:0003911,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006139,GO:0006259,GO:0006266,GO:0006281,GO:0006284,GO:0006288,GO:0006725,GO:0006807,GO:0006950,GO:0006974,GO:0008150,GO:0008152,GO:0009987,GO:0016874,GO:0016886,GO:0033554,GO:0034641,GO:0043170,GO:0044237,GO:0044238,GO:0044260,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0050896,GO:0051103,GO:0051716,GO:0071704,GO:0090304,GO:0140097,GO:1901360 6.5.1.2 3.787e-195 631.0
DYD1_k127_2881082_10 Gram-negative bacterial TonB protein C-terminal - - - 0.00000000006631 72.0
DYD1_k127_2881082_2 DNA polymerase X family K02347 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003988 580.0
DYD1_k127_2881082_3 Mediates influx of magnesium ions K03284 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002279 383.0
DYD1_k127_2881082_4 pyrroloquinoline quinone binding - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001363 359.0
DYD1_k127_2881082_5 Electron transfer flavoprotein domain K03521 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000002348 280.0
DYD1_k127_2881082_6 fatty acid beta-oxidation using acyl-CoA dehydrogenase K03522 GO:0000166,GO:0003674,GO:0003824,GO:0005488,GO:0006082,GO:0006091,GO:0006629,GO:0006631,GO:0006635,GO:0008150,GO:0008152,GO:0009055,GO:0009056,GO:0009062,GO:0009987,GO:0016042,GO:0016054,GO:0016491,GO:0019395,GO:0019752,GO:0022900,GO:0030258,GO:0032787,GO:0033539,GO:0034440,GO:0036094,GO:0043167,GO:0043168,GO:0043436,GO:0044237,GO:0044238,GO:0044242,GO:0044248,GO:0044255,GO:0044281,GO:0044282,GO:0046395,GO:0048037,GO:0050660,GO:0050662,GO:0055114,GO:0071704,GO:0072329,GO:0097159,GO:1901265,GO:1901363,GO:1901575 - 0.000000000000000000000000000000000000000000000000000000000000000000000000000003504 283.0
DYD1_k127_2881082_7 Activator of Hsp90 ATPase homolog 1-like protein - - - 0.00000000000000000624 92.0
DYD1_k127_2881082_8 SMART zinc finger CDGSH-type domain protein - - - 0.0000000000000005767 78.0
DYD1_k127_2881082_9 transport - - - 0.000000000000001016 88.0
DYD1_k127_2910175_0 ornithine cyclodeaminase activity K01750,K18258,K19244 - 1.4.1.1,1.5.1.25,4.3.1.12 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007569 334.0
DYD1_k127_2910175_1 Chromate resistance exported protein - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000001619 284.0
DYD1_k127_2910175_2 TIGRFAM chromate transporter, chromate ion transporter (CHR) family K07240 - - 0.000000000000000000000000000000000000000000000000000000000000000000001546 243.0
DYD1_k127_2910175_3 3-demethylubiquinone-9 3-methyltransferase - - - 0.0000000000000000000000000721 108.0
DYD1_k127_2916800_0 Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family K03585 - - 0.000000000000000000000000000000000000000000001343 173.0
DYD1_k127_2924317_0 Reverse transcriptase (RNA-dependent DNA polymerase) K00986 - 2.7.7.49 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001828 541.0
DYD1_k127_2924317_1 Protein of unknown function (DUF2786) - - - 0.0000002181 55.0
DYD1_k127_2945860_0 Transglycosylase - - - 5.568e-270 865.0
DYD1_k127_2947777_0 NADH-quinone oxidoreductase, chain M K00342 - 1.6.5.3 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002127 540.0
DYD1_k127_2947777_1 NADH ubiquinone oxidoreductase subunit 5 (Chain L) multisubunit Na H antiporter, MnhA subunit K00341 - 1.6.5.3 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001413 539.0
DYD1_k127_2947777_10 NADH-ubiquinone/plastoquinone oxidoreductase chain 6 K00339 - 1.6.5.3 0.00000000000000000000000000000009471 136.0
DYD1_k127_2947777_11 NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient K00340 - 1.6.5.3 0.000000000000000000000004775 111.0
DYD1_k127_2947777_12 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 - - - 0.0000000000000000000002181 101.0
DYD1_k127_2947777_2 Phosphoglucomutase/phosphomannomutase, C-terminal domain K15778 - 5.4.2.2,5.4.2.8 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006385 505.0
DYD1_k127_2947777_3 Succinyl-CoA synthetase functions in the citric acid cycle (TCA), coupling the hydrolysis of succinyl-CoA to the synthesis of either ATP or GTP and thus represents the only step of substrate-level phosphorylation in the TCA. The beta subunit provides nucleotide specificity of the enzyme and binds the substrate succinate, while the binding sites for coenzyme A and phosphate are found in the alpha subunit K01903 - 6.2.1.5 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001266 490.0
DYD1_k127_2947777_4 NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient. This subunit may bind ubiquinone K00337 - 1.6.5.3 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002521 433.0
DYD1_k127_2947777_5 Succinyl-CoA synthetase functions in the citric acid cycle (TCA), coupling the hydrolysis of succinyl-CoA to the synthesis of either ATP or GTP and thus represents the only step of substrate-level phosphorylation in the TCA. The alpha subunit of the enzyme binds the substrates coenzyme A and phosphate, while succinate binding and nucleotide specificity is provided by the beta subunit K01902 - 6.2.1.5 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001425 428.0
DYD1_k127_2947777_6 NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient K00343 - 1.6.5.3 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003398 394.0
DYD1_k127_2947777_7 NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient K00338 - 1.6.5.3 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000004359 288.0
DYD1_k127_2947777_8 Amino acid kinase family K00926 GO:0003674,GO:0003824,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006082,GO:0006520,GO:0006525,GO:0006527,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0008804,GO:0009056,GO:0009063,GO:0009064,GO:0009065,GO:0009987,GO:0016054,GO:0016301,GO:0016310,GO:0016740,GO:0016772,GO:0016774,GO:0019546,GO:0019752,GO:0043436,GO:0044237,GO:0044238,GO:0044248,GO:0044281,GO:0044282,GO:0044424,GO:0044444,GO:0044464,GO:0046395,GO:0071704,GO:1901564,GO:1901565,GO:1901575,GO:1901605,GO:1901606 2.7.2.2 0.000000000000000000000000000000000000000000000000000000000000000000007731 245.0
DYD1_k127_2947777_9 UPF0182 protein K09118 GO:0005575,GO:0005576,GO:0005618,GO:0005623,GO:0005886,GO:0005887,GO:0016020,GO:0016021,GO:0030312,GO:0031224,GO:0031226,GO:0044425,GO:0044459,GO:0044464,GO:0071944 - 0.000000000000000000000000000000000000000006502 177.0
DYD1_k127_2955220_0 The UvrABC repair system catalyzes the recognition and processing of DNA lesions. UvrC both incises the 5' and 3' sides of the lesion. The N-terminal half is responsible for the 3' incision and the C-terminal half is responsible for the 5' incision K03703 - - 1.121e-215 687.0
DYD1_k127_2955220_1 Protein of unknown function (DUF512) - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005887 475.0
DYD1_k127_2955220_10 Catalyzes the methyl esterification of L-isoaspartyl residues in peptides and proteins that result from spontaneous decomposition of normal L-aspartyl and L-asparaginyl residues. It plays a role in the repair and or degradation of damaged proteins K00573 - 2.1.1.77 0.0000000000000000000000000000000000000000000000000000000000000003154 226.0
DYD1_k127_2955220_11 Catalyzes a salvage reaction resulting in the formation of AMP, that is energically less costly than de novo synthesis K00759 - 2.4.2.7 0.000000000000000000000000000000000000000000000000000006991 195.0
DYD1_k127_2955220_12 Catalyzes the stereoinversion of LL-2,6- diaminoheptanedioate (L,L-DAP) to meso-diaminoheptanedioate (meso- DAP), a precursor of L-lysine and an essential component of the bacterial peptidoglycan K01778 - 5.1.1.7 0.0000000000000000000000000000000000000000000000000001438 198.0
DYD1_k127_2955220_13 helix_turn_helix, mercury resistance - - - 0.00000000000000000000000000000000000000004519 165.0
DYD1_k127_2955220_14 Bacterial membrane protein, YfhO - - - 0.00000000000000000000000000000000000001901 159.0
DYD1_k127_2955220_15 chaperone-mediated protein folding K02660 - - 0.0000000000000000000000000000000001319 153.0
DYD1_k127_2955220_16 Catalyzes the transfer of an acyl group from acyl- phosphate (acyl-PO(4)) to glycerol-3-phosphate (G3P) to form lysophosphatidic acid (LPA). This enzyme utilizes acyl-phosphate as fatty acyl donor, but not acyl-CoA or acyl-ACP K08591 - 2.3.1.15 0.000000000000000000000000000000001374 139.0
DYD1_k127_2955220_17 Belongs to the acylphosphatase family K01512 GO:0003674,GO:0003824,GO:0003998,GO:0006950,GO:0008150,GO:0009266,GO:0009408,GO:0009628,GO:0016787,GO:0016817,GO:0016818,GO:0050896 3.6.1.7 0.0000000000000001078 91.0
DYD1_k127_2955220_18 Protein conserved in bacteria - - - 0.00000001146 64.0
DYD1_k127_2955220_19 - - - - 0.0007647 44.0
DYD1_k127_2955220_2 GTPase that plays an essential role in the late steps of ribosome biogenesis K03977 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003753 429.0
DYD1_k127_2955220_3 Glycosyltransferase like family 2 K00721 - 2.4.1.83 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003121 358.0
DYD1_k127_2955220_4 Pyridoxal-phosphate dependent enzyme K01733 - 4.2.3.1 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006297 373.0
DYD1_k127_2955220_5 NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus K00057 - 1.1.1.94 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001643 342.0
DYD1_k127_2955220_6 Nucleotidase that shows phosphatase activity on nucleoside 5'-monophosphates K03787 - 3.1.3.5 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000026 325.0
DYD1_k127_2955220_7 Involved in the biosynthesis of a nickel-pincer cofactor ((SCS)Ni(II) pincer complex). Binds Ni(2 ), and functions in nickel delivery to pyridinium-3,5-bisthiocarboxylic acid mononucleotide (P2TMN), to form the mature cofactor. Is thus probably required for the activation of nickel-pincer cofactor- dependent enzymes K06898,K09121 - 4.99.1.12 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000008491 301.0
DYD1_k127_2955220_8 Involved in peptidoglycan biosynthesis. Transports lipid-linked peptidoglycan precursors from the inner to the outer leaflet of the cytoplasmic membrane K03980 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000001385 280.0
DYD1_k127_2955220_9 PFAM SNARE associated Golgi protein - - - 0.00000000000000000000000000000000000000000000000000000000000000001533 232.0
DYD1_k127_2991128_0 - - - - 4.708e-200 644.0
DYD1_k127_2991128_1 Enoyl-CoA hydratase/isomerase K15866 - 5.3.3.18 0.0000000000000000000000000000000000000004302 160.0
DYD1_k127_2991128_2 One of the essential components for the initiation of protein synthesis. Stabilizes the binding of IF-2 and IF-3 on the 30S subunit to which N-formylmethionyl-tRNA(fMet) subsequently binds. Helps modulate mRNA selection, yielding the 30S pre- initiation complex (PIC). Upon addition of the 50S ribosomal subunit IF-1, IF-2 and IF-3 are released leaving the mature 70S translation initation complex K02518 - - 0.00000000000000000000000000001327 118.0
DYD1_k127_2991128_3 amine dehydrogenase activity - - - 0.000000000000001355 80.0
DYD1_k127_2991128_4 DinB family - - - 0.00000001011 56.0
DYD1_k127_2991128_5 Ribosomal protein S21 K02970 - - 0.0000002853 55.0
DYD1_k127_2991128_6 Periplasmic protein TonB links inner and outer membranes K03832 - - 0.00001312 55.0
DYD1_k127_2991128_7 Gram-negative bacterial TonB protein C-terminal K03832 - - 0.00002395 55.0
DYD1_k127_3009638_0 PFAM regulator of chromosome condensation, RCC1 - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000001695 282.0
DYD1_k127_3009638_1 methyltransferase - - - 0.00000000000000000000000000000000000000001516 156.0
DYD1_k127_301250_0 DNA alkylation repair enzyme - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000007265 266.0
DYD1_k127_3014931_0 Transferrin receptor-like dimerisation domain K01301 - 3.4.17.21 1.148e-241 758.0
DYD1_k127_3014931_1 Functions as a peptidoglycan terminase that cleaves nascent peptidoglycan strands endolytically to terminate their elongation K07082 - - 0.0000002157 54.0
DYD1_k127_3074323_0 Elongation factor SelB winged helix 3 K03833 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000351 415.0
DYD1_k127_3074323_1 Involved in DNA repair and RecF pathway recombination K03584 - - 0.00000000000000000000000000000000000001964 153.0
DYD1_k127_3074323_2 Carboxypeptidase - - - 0.0000000000000000000000000003083 118.0
DYD1_k127_3087807_0 Histidine kinase - - - 0.0000000000000000000000000000000000000000000000000000000000000000015 238.0
DYD1_k127_3087807_1 helix_turn_helix, Lux Regulon - - - 0.000000000000000000000000000000000000000000000000002169 190.0
DYD1_k127_3121256_0 Acyl-CoA dehydrogenase, C-terminal domain - GO:0005575,GO:0005618,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005886,GO:0016020,GO:0030312,GO:0044424,GO:0044444,GO:0044464,GO:0071944 - 9.082e-202 649.0
DYD1_k127_3121256_1 - - - - 0.000000000000000000000000000000000000000000000000000000000000008708 239.0
DYD1_k127_3121458_0 Serine threonine protein kinase K12132 - 2.7.11.1 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005424 539.0
DYD1_k127_3121458_1 Belongs to the binding-protein-dependent transport system permease family K10553 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009413 403.0
DYD1_k127_3121458_2 (ABC) transporter K10554 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000021 380.0
DYD1_k127_3121458_3 DNA-templated transcription, initiation K02405 - - 0.0000000000000000000000000000000000000000000000000000003393 200.0
DYD1_k127_3121458_4 Lactonase, 7-bladed beta-propeller - - - 0.0000000000008641 79.0
DYD1_k127_3203813_0 Subtilase family K14645 - - 0.000000000000000000000000000000000000000000000000000000002476 218.0
DYD1_k127_3203813_1 Glycosyl hydrolase family 65 central catalytic domain K01194 - 3.2.1.28 0.000000000926 63.0
DYD1_k127_3229546_0 Aminotransferase class I and II K00812 - 2.6.1.1 0.0000000000000000000000000000000000000000000000000000000000000603 227.0
DYD1_k127_3253736_0 Acetyltransferase (GNAT) domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003545 326.0
DYD1_k127_3253736_1 Ferritin-like domain K03594 - 1.16.3.1 0.00000000000000000000000000000000000000000000000000000000000001717 220.0
DYD1_k127_3253736_2 Erythromycin esterase K06880 - - 0.00000000000000000000000000000000000000000000000002674 205.0
DYD1_k127_3253736_3 SnoaL-like domain - - - 0.00000001489 64.0
DYD1_k127_3253736_4 curli production assembly transport component CsgG K04087 - - 0.000001165 57.0
DYD1_k127_3253736_5 - - - - 0.00005449 52.0
DYD1_k127_3262952_0 COG3119 Arylsulfatase A and related enzymes - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008683 425.0
DYD1_k127_3262952_1 Uncharacterized protein conserved in bacteria (DUF2255) - - - 0.000000000000000003097 91.0
DYD1_k127_3262952_2 YjbR - - - 0.000000000005028 68.0
DYD1_k127_3299102_0 peptidyl-tyrosine sulfation - - - 1.178e-242 763.0
DYD1_k127_3299102_1 peptidyl-tyrosine sulfation - - - 1.248e-216 685.0
DYD1_k127_3299102_10 Transcriptional regulator, BadM Rrf2 family - - - 0.000000000000004737 81.0
DYD1_k127_3299102_11 - - - - 0.0003484 53.0
DYD1_k127_3299102_2 Enoyl-CoA hydratase K07539,K18570 GO:0003674,GO:0003824,GO:0006139,GO:0006163,GO:0006195,GO:0006637,GO:0006725,GO:0006732,GO:0006753,GO:0006790,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0009056,GO:0009058,GO:0009117,GO:0009150,GO:0009154,GO:0009166,GO:0009259,GO:0009261,GO:0009987,GO:0016787,GO:0016822,GO:0016823,GO:0018130,GO:0019438,GO:0019439,GO:0019637,GO:0019693,GO:0033865,GO:0033869,GO:0033875,GO:0034031,GO:0034032,GO:0034034,GO:0034404,GO:0034641,GO:0034654,GO:0034655,GO:0035383,GO:0043603,GO:0044237,GO:0044238,GO:0044248,GO:0044249,GO:0044270,GO:0044271,GO:0044273,GO:0044281,GO:0044283,GO:0046434,GO:0046483,GO:0046700,GO:0051186,GO:0055086,GO:0071704,GO:0072521,GO:0072523,GO:1901135,GO:1901136,GO:1901292,GO:1901360,GO:1901361,GO:1901362,GO:1901564,GO:1901565,GO:1901575,GO:1901576,GO:1901787,GO:1901788 3.7.1.21 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002624 413.0
DYD1_k127_3299102_3 2-hydroxyglutaryl-CoA dehydratase, D-component K04113 - 1.3.7.8 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004654 408.0
DYD1_k127_3299102_4 2-hydroxyglutaryl-CoA dehydratase, D-component K04112 - 1.3.7.8 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002478 375.0
DYD1_k127_3299102_5 3-beta hydroxysteroid dehydrogenase isomerase - - - 0.0000000000000000000000000000000000000000000000000000000004181 212.0
DYD1_k127_3299102_6 NAD dependent epimerase/dehydratase family K00059,K11610 GO:0000166,GO:0003674,GO:0003824,GO:0004312,GO:0004316,GO:0005488,GO:0005575,GO:0005623,GO:0005886,GO:0006082,GO:0006629,GO:0006631,GO:0006633,GO:0008150,GO:0008152,GO:0008610,GO:0009058,GO:0009059,GO:0009273,GO:0009987,GO:0016020,GO:0016053,GO:0016491,GO:0016614,GO:0016616,GO:0016740,GO:0016746,GO:0016747,GO:0018454,GO:0019752,GO:0030497,GO:0032787,GO:0034645,GO:0036094,GO:0042546,GO:0043167,GO:0043168,GO:0043170,GO:0043436,GO:0044036,GO:0044038,GO:0044085,GO:0044237,GO:0044238,GO:0044249,GO:0044255,GO:0044260,GO:0044281,GO:0044283,GO:0044464,GO:0046394,GO:0046459,GO:0048037,GO:0050661,GO:0050662,GO:0055114,GO:0070402,GO:0070589,GO:0071554,GO:0071704,GO:0071766,GO:0071767,GO:0071768,GO:0071840,GO:0071944,GO:0072330,GO:0097159,GO:1901265,GO:1901363,GO:1901576 1.1.1.100 0.00000000000000000000000000000000000000000000736 178.0
DYD1_k127_3299102_7 Belongs to the enoyl-CoA hydratase isomerase family - - - 0.00000000000000000000000000000000000000003903 168.0
DYD1_k127_3299102_8 PFAM blue (type 1) copper domain protein - - - 0.0000000000000000000000000000000002076 150.0
DYD1_k127_3299102_9 peptidyl-tyrosine sulfation - - - 0.000000000000000000000000000000002144 147.0
DYD1_k127_3334477_0 lysine biosynthetic process via aminoadipic acid - - - 6.786e-220 706.0
DYD1_k127_3334477_1 Cys/Met metabolism PLP-dependent enzyme K01758 - 4.4.1.1 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001118 518.0
DYD1_k127_3334477_10 PFAM Isoprenylcysteine carboxyl methyltransferase - - - 0.00000000000000000001003 102.0
DYD1_k127_3334477_11 Flavin prenyltransferase that catalyzes the synthesis of the prenylated FMN cofactor (prenyl-FMN) for 4-hydroxy-3- polyprenylbenzoic acid decarboxylase UbiD. The prenyltransferase is metal-independent and links a dimethylallyl moiety from dimethylallyl monophosphate (DMAP) to the flavin N5 and C6 atoms of FMN K03186 GO:0003674,GO:0003824,GO:0006732,GO:0008150,GO:0008152,GO:0009058,GO:0009108,GO:0009987,GO:0016829,GO:0016830,GO:0016831,GO:0044237,GO:0044249,GO:0051186,GO:0051188 2.5.1.129 0.00000000000000000004186 90.0
DYD1_k127_3334477_12 DnaJ molecular chaperone homology domain - - - 0.00000002246 66.0
DYD1_k127_3334477_13 Putative zinc-binding metallo-peptidase - - - 0.0004452 52.0
DYD1_k127_3334477_2 Belongs to the GARS family K01945 - 6.3.4.13 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007197 357.0
DYD1_k127_3334477_3 Peptidase family M48 - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001042 331.0
DYD1_k127_3334477_4 Involved in base excision repair of DNA damaged by oxidation or by mutagenic agents. Acts as DNA glycosylase that recognizes and removes damaged bases. Has a preference for oxidized purines, such as 7,8-dihydro-8-oxoguanine (8-oxoG). Has AP (apurinic apyrimidinic) lyase activity and introduces nicks in the DNA strand. Cleaves the DNA backbone by beta-delta elimination to generate a single-strand break at the site of the removed base with both 3'- and 5'-phosphates K10563 - 3.2.2.23,4.2.99.18 0.0000000000000000000000000000000000000000000000000000000000000000000000000000001847 277.0
DYD1_k127_3334477_5 GIY-YIG type nucleases (URI domain) K03703 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000005212 269.0
DYD1_k127_3334477_6 PFAM Sodium calcium exchanger membrane region K07301 - - 0.00000000000000000000000000000000000000000000000000000000000000000000001986 258.0
DYD1_k127_3334477_7 Belongs to the D-alanine--D-alanine ligase family K01921 - 6.3.2.4 0.00000000000000000000000000000000000000000000000000000000000000009967 244.0
DYD1_k127_3334477_8 Phosphoglucomutase/phosphomannomutase, C-terminal domain K01840 - 5.4.2.8 0.000000000000000000000000000000000000008703 160.0
DYD1_k127_3334477_9 Calcineurin-like phosphoesterase superfamily domain K07095 - - 0.00000000000000000000000000000000006146 139.0
DYD1_k127_3342756_0 Catalyzes the conversion of inosine 5'-phosphate (IMP) to xanthosine 5'-phosphate (XMP), the first committed and rate- limiting step in the de novo synthesis of guanine nucleotides, and therefore plays an important role in the regulation of cell growth K00088 - 1.1.1.205 2.213e-241 752.0
DYD1_k127_3342756_1 Sodium:alanine symporter family K03310 - - 4.245e-213 677.0
DYD1_k127_3342756_10 SH3 domain - - - 0.0002915 53.0
DYD1_k127_3342756_2 Binds and transfers iron-sulfur (Fe-S) clusters to target apoproteins. Can hydrolyze ATP K03593 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001753 391.0
DYD1_k127_3342756_3 MoeA N-terminal region (domain I and II) K03750 - 2.10.1.1 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001877 368.0
DYD1_k127_3342756_4 DHH family K06881 - 3.1.13.3,3.1.3.7 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000002895 314.0
DYD1_k127_3342756_5 S-adenosyl-l-methionine hydroxide adenosyltransferase K22205 - - 0.00000000000000000000000000000000000000000000000000000000000000008342 231.0
DYD1_k127_3342756_6 6-pyruvoyl tetrahydropterin synthase K01737 - 4.1.2.50,4.2.3.12 0.000000000000000000000000000000000000000002135 162.0
DYD1_k127_3342756_7 Transfers a GMP moiety from GTP to Mo-molybdopterin (Mo- MPT) cofactor (Moco or molybdenum cofactor) to form Mo- molybdopterin guanine dinucleotide (Mo-MGD) cofactor K03752 - 2.7.7.77 0.00000000000000000000000000000000000108 157.0
DYD1_k127_3342756_8 - - - - 0.00000000000000000000004019 109.0
DYD1_k127_3342756_9 - - - - 0.00004142 55.0
DYD1_k127_3384651_0 NADH dehydrogenase, FAD-containing subunit K03885 - 1.6.99.3 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003399 326.0
DYD1_k127_344544_0 The central subunit of the protein translocation channel SecYEG. Consists of two halves formed by TMs 1-5 and 6-10. These two domains form a lateral gate at the front which open onto the bilayer between TMs 2 and 7, and are clamped together by SecE at the back. The channel is closed by both a pore ring composed of hydrophobic SecY resides and a short helix (helix 2A) on the extracellular side of the membrane which forms a plug. The plug probably moves laterally to allow the channel to open. The ring and the pore may move independently K03076 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000507 540.0
DYD1_k127_344544_1 Binds the lower part of the 30S subunit head. Binds mRNA in the 70S ribosome, positioning it for translation K02982 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009293 364.0
DYD1_k127_344544_10 One of the primary rRNA binding proteins, it binds directly near the 3'-end of the 23S rRNA, where it nucleates assembly of the 50S subunit K02906 - - 0.00000000000000000000000000000000000000000000000000000000000807 218.0
DYD1_k127_344544_11 Binds to 23S rRNA. Forms part of two intersubunit bridges in the 70S ribosome K02874 - - 0.00000000000000000000000000000000000000000000000000000000001919 207.0
DYD1_k127_344544_12 Catalyzes the reversible transfer of the terminal phosphate group between ATP and AMP. Plays an important role in cellular energy homeostasis and in adenine nucleotide metabolism K00939 GO:0003674,GO:0003824,GO:0004017,GO:0006139,GO:0006725,GO:0006753,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009117,GO:0009123,GO:0009165,GO:0009987,GO:0015949,GO:0016301,GO:0016310,GO:0016740,GO:0016772,GO:0016776,GO:0018130,GO:0019205,GO:0019438,GO:0019637,GO:0034641,GO:0034654,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0046483,GO:0046940,GO:0050145,GO:0055086,GO:0071704,GO:0090407,GO:1901293,GO:1901360,GO:1901362,GO:1901576 2.7.4.3 0.00000000000000000000000000000000000000000000000002024 188.0
DYD1_k127_344544_13 Involved in the binding of tRNA to the ribosomes K02946 - - 0.0000000000000000000000000000000000000000000000001304 178.0
DYD1_k127_344544_14 Binds to the 23S rRNA K02876 - - 0.000000000000000000000000000000000000000002703 164.0
DYD1_k127_344544_15 Protein S19 forms a complex with S13 that binds strongly to the 16S ribosomal RNA K02965 - - 0.0000000000000000000000000000000000000007431 149.0
DYD1_k127_344544_16 One of the primary rRNA binding proteins, it binds directly to 16S rRNA central domain where it helps coordinate assembly of the platform of the 30S subunit K02994 GO:0003674,GO:0003735,GO:0005198,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0015935,GO:0022626,GO:0022627,GO:0032991,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:1990904 - 0.00000000000000000000000000000000000007043 149.0
DYD1_k127_344544_17 Protein of unknown function DUF86 - - - 0.0000000000000000000000000000000000002672 147.0
DYD1_k127_344544_18 The globular domain of the protein is located near the polypeptide exit tunnel on the outside of the subunit, while an extended beta-hairpin is found that lines the wall of the exit tunnel in the center of the 70S ribosome K02890 - - 0.00000000000000000000000000000003157 130.0
DYD1_k127_344544_19 One of the proteins that surrounds the polypeptide exit tunnel on the outside of the subunit K02895 - - 0.0000000000000000000000000000003174 126.0
DYD1_k127_344544_2 One of the primary rRNA binding proteins. Required for association of the 30S and 50S subunits to form the 70S ribosome, for tRNA binding and peptide bond formation. It has been suggested to have peptidyltransferase activity K02886 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001583 368.0
DYD1_k127_344544_20 Nucleotidyltransferase domain - - - 0.00000000000000000000000000004413 121.0
DYD1_k127_344544_21 This is one of the proteins that binds and probably mediates the attachment of the 5S RNA into the large ribosomal subunit, where it forms part of the central protuberance K02881 GO:0003674,GO:0003676,GO:0003723,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0008097,GO:0008150,GO:0015934,GO:0019843,GO:0022625,GO:0022626,GO:0032991,GO:0040007,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:0097159,GO:1901363,GO:1990904 - 0.000000000000000000000000000883 123.0
DYD1_k127_344544_22 transport - - - 0.00000000000000000000004637 110.0
DYD1_k127_344544_23 One of the primary rRNA binding proteins, it binds specifically to the 5'-end of 16S ribosomal RNA K02961 - - 0.00000000000000000000007504 104.0
DYD1_k127_344544_24 Binds 16S rRNA, required for the assembly of 30S particles and may also be responsible for determining the conformation of the 16S rRNA at the A site K02954 - - 0.00000000000000000001047 102.0
DYD1_k127_344544_25 This protein promotes the GTP-dependent binding of aminoacyl-tRNA to the A-site of ribosomes during protein biosynthesis K02358 - - 0.00000000000000004178 80.0
DYD1_k127_344544_26 One of the early assembly proteins it binds 23S rRNA. One of the proteins that surrounds the polypeptide exit tunnel on the outside of the ribosome. Forms the main docking site for trigger factor binding to the ribosome K02892 - - 0.0000000000000009286 83.0
DYD1_k127_344544_27 Ribosomal protein L30p/L7e K02907 - - 0.0000000000009037 73.0
DYD1_k127_344544_28 Ribosomal L29 protein K02904 - - 0.00000006674 57.0
DYD1_k127_344544_3 Metallopeptidase family M24 K01265 - 3.4.11.18 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001172 336.0
DYD1_k127_344544_4 Formiminotransferase-cyclodeaminase K00603,K01746,K13990 - 2.1.2.5,4.3.1.4 0.0000000000000000000000000000000000000000000000000000000000000000000000000002778 269.0
DYD1_k127_344544_5 This is 1 of the proteins that binds and probably mediates the attachment of the 5S RNA into the large ribosomal subunit, where it forms part of the central protuberance. In the 70S ribosome it contacts protein S13 of the 30S subunit (bridge B1b), connecting the 2 subunits K02931 - - 0.000000000000000000000000000000000000000000000000000000000000000000000006254 250.0
DYD1_k127_344544_6 This protein binds to the 23S rRNA, and is important in its secondary structure. It is located near the subunit interface in the base of the L7 L12 stalk, and near the tRNA binding site of the peptidyltransferase center K02933 - - 0.00000000000000000000000000000000000000000000000000000000000000000000154 239.0
DYD1_k127_344544_7 Located at the back of the 30S subunit body where it stabilizes the conformation of the head with respect to the body K02988 - - 0.00000000000000000000000000000000000000000000000000000000000000000003826 239.0
DYD1_k127_344544_8 Forms part of the polypeptide exit tunnel K02926 - - 0.00000000000000000000000000000000000000000000000000000000000001339 226.0
DYD1_k127_344544_9 Binds 23S rRNA and is also seen to make contacts with the A and possibly P site tRNAs K02878 GO:0003674,GO:0003676,GO:0003723,GO:0003735,GO:0005198,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0015934,GO:0019843,GO:0022625,GO:0022626,GO:0032991,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:0097159,GO:1901363,GO:1990904 - 0.0000000000000000000000000000000000000000000000000000000000001575 214.0
DYD1_k127_3468620_0 Isoprenylcysteine carboxyl methyltransferase (ICMT) family - - - 0.00000000000000000000000000000000000000000000000000001516 195.0
DYD1_k127_3468620_1 Multicopper oxidase - - - 0.00000000000000000000000000000000000000000000004275 180.0
DYD1_k127_3468620_2 SCO1/SenC K07152 - - 0.0000000000000000000000000000000004081 140.0
DYD1_k127_3468620_3 - K17226,K17227 - - 0.000004127 58.0
DYD1_k127_3567365_0 Belongs to the Glu Leu Phe Val dehydrogenases family - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008904 445.0
DYD1_k127_3567365_1 PFAM peptidase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003497 439.0
DYD1_k127_3567365_2 domain, Protein K01179,K07260,K13735 - 3.2.1.4,3.4.17.14 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000003401 287.0
DYD1_k127_3567365_3 Putative aminopeptidase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000005285 290.0
DYD1_k127_3567365_4 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily - - - 0.00000000000000000000000000000000000000000000000000000000000002892 219.0
DYD1_k127_3579329_0 Carbohydrate family 9 binding domain-like - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001237 476.0
DYD1_k127_3579329_1 Sulfotransferase domain - - - 0.0000000000000000000000000000000000000000000000000000000000004963 223.0
DYD1_k127_3579329_2 LytTr DNA-binding domain K02477 - - 0.000000000000000000000000000000000000000008364 170.0
DYD1_k127_3579329_3 Tetratricopeptide repeat - - - 0.00000000000000000000000000006463 130.0
DYD1_k127_3592045_0 Adenylyl- / guanylyl cyclase, catalytic domain K01768 - 4.6.1.1 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001608 416.0
DYD1_k127_3592045_1 Maf-like protein K06287 - - 0.000000000000000000000000000000000000000000000000003489 188.0
DYD1_k127_3592045_2 rejects L-amino acids rather than detecting D-amino acids in the active site. By recycling D-aminoacyl-tRNA to D-amino acids and free tRNA molecules, this enzyme counteracts the toxicity associated with the formation of D-aminoacyl-tRNA entities in vivo and helps enforce protein L-homochirality K07560 - - 0.0000000000000000000000000000000000000000000000005845 177.0
DYD1_k127_3592045_3 protein conserved in cyanobacteria - - - 0.00000000000000000000000000000000000000000001716 171.0
DYD1_k127_3592045_4 Part of a heterotetrameric complex that catalyzes the two-step biosynthesis of anthranilate, an intermediate in the biosynthesis of L-tryptophan. In the first step, the glutamine- binding beta subunit (TrpG) of anthranilate synthase (AS) provides the glutamine amidotransferase activity which generates ammonia as a substrate that, along with chorismate, is used in the second step, catalyzed by the large alpha subunit of AS (TrpE) to produce anthranilate. In the absence of TrpG, TrpE can synthesize anthranilate directly from chorismate and high concentrations of ammonia K01657 - 4.1.3.27 0.00000000000004605 73.0
DYD1_k127_3605924_0 Carbamoyl-phosphate synthetase large chain, oligomerisation domain K01955 - 6.3.5.5 0.0 1297.0
DYD1_k127_3605924_1 cell wall formation K00075 - 1.3.1.98 0.00000000000000000000000000000000004716 144.0
DYD1_k127_3617614_0 Nitroreductase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005533 348.0
DYD1_k127_3617614_1 PFAM CBS domain K03699 - - 0.00000000000000000000000000000000000000000000000000001358 196.0
DYD1_k127_3617614_2 Universal stress protein family - - - 0.0000000000000000000000002799 109.0
DYD1_k127_362481_0 Involved in targeting and insertion of nascent membrane proteins into the cytoplasmic membrane. Binds to the hydrophobic signal sequence of the ribosome-nascent chain (RNC) as it emerges from the ribosomes. The SRP-RNC complex is then targeted to the cytoplasmic membrane where it interacts with the SRP receptor FtsY K03106 - 3.6.5.4 0.00000000000000000000000000001483 119.0
DYD1_k127_362481_1 An accessory protein needed during the final step in the assembly of 30S ribosomal subunit, possibly for assembly of the head region. Probably interacts with S19. Essential for efficient processing of 16S rRNA. May be needed both before and after RbfA during the maturation of 16S rRNA. It has affinity for free ribosomal 30S subunits but not for 70S ribosomes K02860 GO:0008150,GO:0040007 - 0.000000000000000000000000005427 118.0
DYD1_k127_362481_2 Ribosomal protein S16 K02959 - - 0.000000000000000000001064 96.0
DYD1_k127_3645245_0 ATPase P-type (Transporting), HAD superfamily, subfamily IC - - - 0.00000000000000000000000000000000000000000000000000000000000006878 219.0
DYD1_k127_3645245_1 - - - - 0.000000000000000000000002566 107.0
DYD1_k127_3647681_0 NADH-Ubiquinone oxidoreductase (complex I), chain 5 K00341 - 1.6.5.3 0.000000000000000000000000000000000000365 152.0
DYD1_k127_3647681_1 NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient K00340 GO:0003674,GO:0003824,GO:0003954,GO:0005575,GO:0005623,GO:0005886,GO:0006091,GO:0006119,GO:0006120,GO:0006139,GO:0006163,GO:0006725,GO:0006753,GO:0006793,GO:0006796,GO:0006807,GO:0008137,GO:0008150,GO:0008152,GO:0009117,GO:0009123,GO:0009126,GO:0009141,GO:0009144,GO:0009150,GO:0009161,GO:0009167,GO:0009199,GO:0009205,GO:0009259,GO:0009987,GO:0015980,GO:0016020,GO:0016310,GO:0016491,GO:0016651,GO:0016655,GO:0017144,GO:0019637,GO:0019693,GO:0022900,GO:0022904,GO:0030964,GO:0032991,GO:0034641,GO:0042773,GO:0042775,GO:0044237,GO:0044238,GO:0044281,GO:0044425,GO:0044459,GO:0044464,GO:0045271,GO:0045272,GO:0045333,GO:0046034,GO:0046483,GO:0050136,GO:0055086,GO:0055114,GO:0070469,GO:0070470,GO:0071704,GO:0071944,GO:0072521,GO:0098796,GO:0098797,GO:0098803,GO:1901135,GO:1901360,GO:1901564,GO:1902494,GO:1990204 1.6.5.3 0.00000000000000000000000008787 109.0
DYD1_k127_3647681_2 Belongs to the complex I subunit 6 family K00339 - 1.6.5.3 0.000000000000000000002217 98.0
DYD1_k127_366844_0 DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates K03043 GO:0000428,GO:0005575,GO:0005622,GO:0005623,GO:0030880,GO:0032991,GO:0044424,GO:0044464,GO:0061695,GO:1902494,GO:1990234 2.7.7.6 0.0 1240.0
DYD1_k127_366844_1 Binds directly to 23S rRNA. The L1 stalk is quite mobile in the ribosome, and is involved in E site tRNA release K02863 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000278 308.0
DYD1_k127_366844_2 Participates in transcription elongation, termination and antitermination K02601 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000007332 256.0
DYD1_k127_366844_3 Forms part of the ribosomal stalk which helps the ribosome interact with GTP-bound translation factors K02867 - - 0.0000000000000000000000000000000000000000000000000000000000007372 212.0
DYD1_k127_366844_4 COGs COG2204 Response regulator containing CheY-like receiver AAA-type ATPase and DNA-binding domains K13599 - - 0.0000000000000000000000000000000000000000000000000000000005067 213.0
DYD1_k127_366844_5 Forms part of the ribosomal stalk which helps the ribosome interact with GTP-bound translation factors. Is thus essential for accurate translation K02935 - - 0.000000000000000000000000000000000000000000004497 166.0
DYD1_k127_366844_6 Forms part of the ribosomal stalk, playing a central role in the interaction of the ribosome with GTP-bound translation factors K02864 - - 0.000000000000000000000000006663 118.0
DYD1_k127_366844_7 Ribosomal protein L33 K02913 - - 0.000000000000003979 75.0
DYD1_k127_366844_8 This protein promotes the GTP-dependent binding of aminoacyl-tRNA to the A-site of ribosomes during protein biosynthesis K02358 GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0044424,GO:0044464 - 0.00000000000005641 71.0
DYD1_k127_366844_9 Essential subunit of the Sec protein translocation channel SecYEG. Clamps together the 2 halves of SecY. May contact the channel plug during translocation K03073 - - 0.0000532 49.0
DYD1_k127_3671843_0 kinase activity K07154 - 2.7.11.1 0.000000000000000000000000000000000000000000000000000000000000000000188 241.0
DYD1_k127_3671843_1 COG1167 Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain (MocR family) and their eukaryotic orthologs K00375 - - 0.0000000000001077 73.0
DYD1_k127_369762_0 Putative restriction endonuclease - - - 0.0000000000000000000000000000000007687 137.0
DYD1_k127_369762_1 Oxidoreductase family, NAD-binding Rossmann fold - - - 0.000000000000001303 77.0
DYD1_k127_3734433_0 Sodium:solute symporter family K03307 - - 0.00000000000000000000000000000000000000000001688 179.0
DYD1_k127_3734433_1 Serine/threonine phosphatases, family 2C, catalytic domain K01090,K20074 - 3.1.3.16 0.00000000000000000000000000000000000007917 149.0
DYD1_k127_3734433_3 COG0631 Serine threonine protein phosphatase K20074 - 3.1.3.16 0.0002488 47.0
DYD1_k127_3750247_0 amino acids such as valine, to avoid such errors it has two additional distinct tRNA(Ile)-dependent editing activities. One activity is designated as 'pretransfer' editing and involves the hydrolysis of activated Val-AMP. The other activity is designated 'posttransfer' editing and involves deacylation of mischarged Val-tRNA(Ile) K01870 - 6.1.1.5 9.15e-272 861.0
DYD1_k127_3750247_1 The purine nucleoside phosphorylases catalyze the phosphorolytic breakdown of the N-glycosidic bond in the beta- (deoxy)ribonucleoside molecules, with the formation of the corresponding free purine bases and pentose-1-phosphate K03783 - 2.4.2.1 0.000000000000000000000000000000000000000000000000000001401 193.0
DYD1_k127_3754937_0 CarboxypepD_reg-like domain - - - 2.287e-197 646.0
DYD1_k127_3754937_1 PFAM TonB-dependent Receptor Plug - - - 0.000004354 59.0
DYD1_k127_3768682_0 tRNA synthetases class II (D, K and N) K01893 - 6.1.1.22 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003889 563.0
DYD1_k127_3768682_1 Critical role in recombination and DNA repair. Helps process Holliday junction intermediates to mature products by catalyzing branch migration. Has a DNA unwinding activity characteristic of a DNA helicase with a 3'- to 5'- polarity. Unwinds branched duplex DNA (Y-DNA) K03655 - 3.6.4.12 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000437 535.0
DYD1_k127_3768682_2 Transcriptional coactivator pterin dehydratase K01724 - 4.2.1.96 0.000000000000000000000000000000000000002372 151.0
DYD1_k127_3768682_3 Protein of unknown function (DUF3047) - - - 0.0000000000000000000000000000000004173 145.0
DYD1_k127_3768682_4 PQQ-like domain - - - 0.0000004185 62.0
DYD1_k127_3783054_0 Belongs to the CarB family K01955 - 6.3.5.5 0.0 1058.0
DYD1_k127_3823010_0 Glutamine synthetase, beta-Grasp domain K01915 - 6.3.1.2 2.582e-195 620.0
DYD1_k127_3823010_1 Catalyzes the conversion of cyclic dehypoxanthine futalosine (cyclic DHFL) into 1,4-dihydroxy-6-naphthoate, a step in the biosynthesis of menaquinone (MK, vitamin K2) K11785 - - 0.00000000000000000000000000000000000000000000000000001039 199.0
DYD1_k127_3823010_2 - - - - 0.0000000000000000000000000000000000001869 154.0
DYD1_k127_3823010_3 Part of the outer membrane protein assembly complex, which is involved in assembly and insertion of beta-barrel proteins into the outer membrane - - - 0.000000002207 68.0
DYD1_k127_3829201_0 FAD linked oxidases, C-terminal domain K00104 - 1.1.3.15 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002006 555.0
DYD1_k127_3829201_1 Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released K03086 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008608 441.0
DYD1_k127_3829201_2 ATP-dependent protease La (LON) substrate-binding domain K01338 - 3.4.21.53 0.00000000000000000000000000000000005683 143.0
DYD1_k127_3829201_3 Catalyzes the conversion of 3-deoxy-D-arabino- heptulosonate 7-phosphate (DAHP) to dehydroquinate (DHQ) K01735 - 4.2.3.4 0.000000000000000000000000007606 115.0
DYD1_k127_3838694_0 Releases the supercoiling and torsional tension of DNA, which is introduced during the DNA replication and transcription, by transiently cleaving and rejoining one strand of the DNA duplex. Introduces a single-strand break via transesterification at a target site in duplex DNA. The scissile phosphodiester is attacked by the catalytic tyrosine of the enzyme, resulting in the formation of a DNA-(5'-phosphotyrosyl)-enzyme intermediate and the expulsion of a 3'-OH DNA strand. The free DNA strand then undergoes passage around the unbroken strand, thus removing DNA supercoils. Finally, in the religation step, the DNA 3'-OH attacks the covalent intermediate to expel the active-site tyrosine and restore the DNA phosphodiester backbone K03168 - 5.99.1.2 1.334e-217 698.0
DYD1_k127_3838694_1 Catalyzes the anti-1,4-elimination of the C-3 phosphate and the C-6 proR hydrogen from 5-enolpyruvylshikimate-3-phosphate (EPSP) to yield chorismate, which is the branch point compound that serves as the starting substrate for the three terminal pathways of aromatic amino acid biosynthesis. This reaction introduces a second double bond into the aromatic ring system K01736 - 4.2.3.5 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003024 478.0
DYD1_k127_3838694_2 amine dehydrogenase activity - - - 0.000000000000000000000000001834 116.0
DYD1_k127_3838694_3 Catalyzes the specific phosphorylation of the 3-hydroxyl group of shikimic acid using ATP as a cosubstrate K00891 - 2.7.1.71 0.000000000000000000000000129 116.0
DYD1_k127_3850923_0 Transcriptional regulatory protein, C terminal - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004599 332.0
DYD1_k127_3850923_1 Carboxypeptidase regulatory-like domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000007552 319.0
DYD1_k127_3850923_2 hydrolase activity, acting on ester bonds - - - 0.00000000000000000000000000000000000000000000000000001807 200.0
DYD1_k127_3850923_4 Protein of unknown function (DUF456) K09793 - - 0.0000000000000000000000000005255 120.0
DYD1_k127_3870871_0 response regulator K07713 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006373 331.0
DYD1_k127_3870871_1 ggdef domain - - - 0.000000000000000000000000000000000001979 153.0
DYD1_k127_3870871_2 Bacterial Ig-like domain 2 - - - 0.00001097 56.0
DYD1_k127_3870871_3 NB-ARC domain - - - 0.0001415 55.0
DYD1_k127_3874900_0 Major facilitator Superfamily - - - 0.00001401 47.0
DYD1_k127_3874900_1 Belongs to the 'phage' integrase family - - - 0.000139 54.0
DYD1_k127_3904677_0 nUDIX hydrolase K01515,K03574 - 3.6.1.13,3.6.1.55 0.00000000000000000000000000000000000000000000000002377 187.0
DYD1_k127_3904677_1 Cupin 2, conserved barrel - - - 0.00000000000000000000000000000000000000005886 156.0
DYD1_k127_3904677_2 Domain of unknown function (DUF4397) - - - 0.00000000000000000000000009078 117.0
DYD1_k127_3904677_3 - - - - 0.000000000001197 74.0
DYD1_k127_390984_0 COG2217 Cation transport ATPase K01534 - 3.6.3.3,3.6.3.5 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002293 510.0
DYD1_k127_390984_1 Cytochrome b(N-terminal)/b6/petB K00410,K00412,K02635,K02637 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001816 431.0
DYD1_k127_390984_10 cyclic nucleotide binding K10914,K21563 - - 0.000000000000000000000000000000000000000004153 162.0
DYD1_k127_390984_11 YCII-related domain - - - 0.00000000000000000000000000000000000000056 151.0
DYD1_k127_390984_12 Protein of unknown function (DUF1232) - - - 0.0000000000000000000000000000000000009318 145.0
DYD1_k127_390984_13 ABC-type transport system involved in multi-copper enzyme maturation permease component K01992 - - 0.0000000000000000000000000000000003979 145.0
DYD1_k127_390984_14 Catalyzes the reduction of nitrite to ammonia, consuming six electrons in the process K03385 - 1.7.2.2 0.0000000000000000000000001703 122.0
DYD1_k127_390984_15 Cytochrome c7 and related cytochrome c - - - 0.000000000000000000000005823 117.0
DYD1_k127_390984_16 Catalyzes the reduction of nitrite to ammonia, consuming six electrons in the process K03385 - 1.7.2.2 0.000000000000000001501 100.0
DYD1_k127_390984_17 ABC-2 family transporter protein K01992 - - 0.0000000000000001154 94.0
DYD1_k127_390984_18 heat shock protein binding - - - 0.000000001318 71.0
DYD1_k127_390984_2 oxidoreductase K17218 - 1.8.5.4 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001806 409.0
DYD1_k127_390984_3 Cytochrome c554 and c-prime K03620 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002223 338.0
DYD1_k127_390984_4 abc transporter K01990 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002217 328.0
DYD1_k127_390984_5 PFAM ABC transporter related K01990 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000003215 306.0
DYD1_k127_390984_6 Rieske [2Fe-2S] domain K00411,K02636,K03886 - 1.10.2.2,1.10.9.1 0.00000000000000000000000000000000000000000000000003472 183.0
DYD1_k127_390984_7 Sel1-like repeats. - - - 0.000000000000000000000000000000000000000000000002409 186.0
DYD1_k127_390984_8 Part of a sulfur-relay system required for 2-thiolation of 5-methylaminomethyl-2-thiouridine (mnm(5)s(2)U) at tRNA wobble positions. Accepts sulfur from TusA and transfers it in turn to TusE K06039 GO:0003674,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0008150,GO:0009987,GO:0016043,GO:0022607,GO:0034214,GO:0042802,GO:0043933,GO:0044085,GO:0044424,GO:0044444,GO:0044464,GO:0051259,GO:0065003,GO:0071840 - 0.0000000000000000000000000000000000000000000002212 172.0
DYD1_k127_3920345_0 Putative ATP-binding cassette K01992 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001723 534.0
DYD1_k127_3920345_1 AAA domain, putative AbiEii toxin, Type IV TA system K01990 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003329 345.0
DYD1_k127_3920345_2 PFAM transglutaminase domain protein - - - 0.0000000000000000000000000000000000000000000000000000000238 218.0
DYD1_k127_3920345_3 DinB family - - - 0.0000000000000000000000000000000000000000004151 163.0
DYD1_k127_3920345_4 PFAM Appr-1-p processing domain protein - - - 0.0000000005468 67.0
DYD1_k127_392848_0 Oxygenase, catalysing oxidative methylation of damaged DNA K09990 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007768 381.0
DYD1_k127_392848_1 Uncharacterised protein family UPF0066 - - - 0.0000000000000000000000000000000000000000000000008578 177.0
DYD1_k127_392848_2 pyrroloquinoline quinone binding - - - 0.000000000000000000000000000000000000000000004135 172.0
DYD1_k127_392848_3 methyltransferase activity - - - 0.00000000000000000000000000000000000000239 153.0
DYD1_k127_392848_4 Acyl-CoA dehydrogenase, C-terminal domain K00249 - 1.3.8.7 0.00000000000000000000000000008669 121.0
DYD1_k127_392848_5 WD40-like Beta Propeller Repeat - - - 0.00000000000000000000000001194 126.0
DYD1_k127_392848_6 Predicted integral membrane protein (DUF2269) - - - 0.0000000000000000000005569 104.0
DYD1_k127_393200_0 Rubrerythrin K22405 - 1.6.3.4 0.000000000000000000000000000000000000000000000000000000000000002686 231.0
DYD1_k127_393200_1 protein tyrosine kinase activity K03593 - - 0.0000000000000000000000000000000000000000000001268 176.0
DYD1_k127_393200_2 Proto-chlorophyllide reductase 57 kd subunit - - - 0.0000000000000000000968 99.0
DYD1_k127_393200_3 4Fe-4S single cluster domain of Ferredoxin I - - - 0.000000000000005511 79.0
DYD1_k127_3937318_0 pilus organization - - - 0.0000000000000000000000000000000000000000000000000000000000001943 228.0
DYD1_k127_3937318_1 Glycosyl hydrolases family 2, TIM barrel domain - - - 0.0000617 55.0
DYD1_k127_3943460_0 DNA ligase (ATP) activity K01971 - 6.5.1.1 3.602e-229 730.0
DYD1_k127_3943460_1 PFAM Ribulose bisphosphate carboxylase large K01601 - 4.1.1.39 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002105 363.0
DYD1_k127_3943460_2 With LigD forms a non-homologous end joining (NHEJ) DNA repair enzyme, which repairs dsDNA breaks with reduced fidelity. Binds linear dsDNA with 5'- and 3'- overhangs but not closed circular dsDNA nor ssDNA. Recruits and stimulates the ligase activity of LigD K10979 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000001801 304.0
DYD1_k127_3943460_3 Titin isoform N2-B. Source PGD - - - 0.0000000002169 74.0
DYD1_k127_3978034_0 PFAM Integrase catalytic K07497 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007528 398.0
DYD1_k127_3978034_1 PFAM transposase IS3 IS911 family protein K07483 - - 0.000000000000000000000000000000002257 132.0
DYD1_k127_3978034_2 Copper amine oxidase, N2 domain K00276 - 1.4.3.21 0.00000000000000000000000000003768 124.0
DYD1_k127_3979946_0 The central subunit of the protein translocation channel SecYEG. Consists of two halves formed by TMs 1-5 and 6-10. These two domains form a lateral gate at the front which open onto the bilayer between TMs 2 and 7, and are clamped together by SecE at the back. The channel is closed by both a pore ring composed of hydrophobic SecY resides and a short helix (helix 2A) on the extracellular side of the membrane which forms a plug. The plug probably moves laterally to allow the channel to open. The ring and the pore may move independently K03076 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001377 504.0
DYD1_k127_3979946_1 Binds the lower part of the 30S subunit head. Binds mRNA in the 70S ribosome, positioning it for translation K02982 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001079 344.0
DYD1_k127_3979946_10 binds to the 23S rRNA K02876 GO:0003674,GO:0003735,GO:0005198,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0015934,GO:0022625,GO:0022626,GO:0032991,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:1990904 - 0.000000000000000000000000000000000000000001884 160.0
DYD1_k127_3979946_11 One of the proteins that surrounds the polypeptide exit tunnel on the outside of the subunit K02895 - - 0.00000000000000000000000000000002822 128.0
DYD1_k127_3979946_12 The globular domain of the protein is located near the polypeptide exit tunnel on the outside of the subunit, while an extended beta-hairpin is found that lines the wall of the exit tunnel in the center of the 70S ribosome K02890 - - 0.00000000000000000000000000000157 124.0
DYD1_k127_3979946_13 One of the primary rRNA binding proteins, it binds specifically to the 5'-end of 16S ribosomal RNA K02961 GO:0003674,GO:0003735,GO:0005198,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0006412,GO:0006518,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0015935,GO:0019538,GO:0022626,GO:0022627,GO:0032991,GO:0034641,GO:0034645,GO:0043043,GO:0043170,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:0071704,GO:1901564,GO:1901566,GO:1901576,GO:1990904 - 0.000000000000000000000000003608 115.0
DYD1_k127_3979946_14 Binds 16S rRNA, required for the assembly of 30S particles and may also be responsible for determining the conformation of the 16S rRNA at the A site K02954 GO:0003674,GO:0003735,GO:0005198,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005840,GO:0006412,GO:0006518,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0015935,GO:0019538,GO:0032991,GO:0034641,GO:0034645,GO:0043043,GO:0043170,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044446,GO:0044464,GO:0071704,GO:1901564,GO:1901566,GO:1901576,GO:1990904 - 0.000000000000000000000005414 102.0
DYD1_k127_3979946_15 Ribosomal protein L30 K02907 GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0008150,GO:0015934,GO:0022625,GO:0022626,GO:0032991,GO:0040007,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:1990904 - 0.0000000000339 65.0
DYD1_k127_3979946_16 Belongs to the universal ribosomal protein uL29 family K02904 GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0015934,GO:0022625,GO:0022626,GO:0032991,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:1990904 - 0.000001446 53.0
DYD1_k127_3979946_2 Metallopeptidase family M24 K01265 - 3.4.11.18 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004982 329.0
DYD1_k127_3979946_3 This is 1 of the proteins that binds and probably mediates the attachment of the 5S RNA into the large ribosomal subunit, where it forms part of the central protuberance. In the 70S ribosome it contacts protein S13 of the 30S subunit (bridge B1b), connecting the 2 subunits K02931 - - 0.00000000000000000000000000000000000000000000000000000000000000000000002867 249.0
DYD1_k127_3979946_4 Located at the back of the 30S subunit body where it stabilizes the conformation of the head with respect to the body K02988 - - 0.000000000000000000000000000000000000000000000000000000000000000003692 232.0
DYD1_k127_3979946_5 This protein binds to the 23S rRNA, and is important in its secondary structure. It is located near the subunit interface in the base of the L7 L12 stalk, and near the tRNA binding site of the peptidyltransferase center K02933 - - 0.0000000000000000000000000000000000000000000000000000000000000003509 224.0
DYD1_k127_3979946_6 Binds 23S rRNA and is also seen to make contacts with the A and possibly P site tRNAs K02878 GO:0000027,GO:0000049,GO:0003674,GO:0003676,GO:0003723,GO:0003735,GO:0005198,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0005886,GO:0006412,GO:0006518,GO:0006807,GO:0006996,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0015934,GO:0016020,GO:0016043,GO:0019538,GO:0019843,GO:0022607,GO:0022613,GO:0022618,GO:0022625,GO:0022626,GO:0032991,GO:0034622,GO:0034641,GO:0034645,GO:0040007,GO:0042254,GO:0042255,GO:0042273,GO:0043043,GO:0043170,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043603,GO:0043604,GO:0043933,GO:0044085,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:0065003,GO:0070925,GO:0071704,GO:0071826,GO:0071840,GO:0071944,GO:0097159,GO:1901363,GO:1901564,GO:1901566,GO:1901576,GO:1990904 - 0.000000000000000000000000000000000000000000000000000000000006399 216.0
DYD1_k127_3979946_7 Catalyzes the reversible transfer of the terminal phosphate group between ATP and AMP. Plays an important role in cellular energy homeostasis and in adenine nucleotide metabolism K00939 GO:0003674,GO:0003824,GO:0004017,GO:0006139,GO:0006725,GO:0006753,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009117,GO:0009123,GO:0009165,GO:0009987,GO:0015949,GO:0016301,GO:0016310,GO:0016740,GO:0016772,GO:0016776,GO:0018130,GO:0019205,GO:0019438,GO:0019637,GO:0034641,GO:0034654,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0046483,GO:0046940,GO:0050145,GO:0055086,GO:0071704,GO:0090407,GO:1901293,GO:1901360,GO:1901362,GO:1901576 2.7.4.3 0.000000000000000000000000000000000000000000000000000000001239 207.0
DYD1_k127_3979946_8 Binds to 23S rRNA. Forms part of two intersubunit bridges in the 70S ribosome K02874 - - 0.000000000000000000000000000000000000000000000000000000008901 204.0
DYD1_k127_3979946_9 One of the primary rRNA binding proteins, it binds directly to 16S rRNA central domain where it helps coordinate assembly of the platform of the 30S subunit K02994 GO:0003674,GO:0003735,GO:0005198,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0015935,GO:0022626,GO:0022627,GO:0032991,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:1990904 - 0.000000000000000000000000000000000000000001329 164.0
DYD1_k127_3982615_0 Belongs to the class IV-like SAM-binding methyltransferase superfamily. RNA methyltransferase TrmH family K03218 - 2.1.1.185 0.00000000000000000000000000000000000000000000000000001181 197.0
DYD1_k127_3982615_1 - - - - 0.000003861 51.0
DYD1_k127_4017547_0 Rhodanese Homology Domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000001351 258.0
DYD1_k127_4017547_1 VWA domain containing CoxE-like protein K07114 - - 0.000000000000000000000000000000000000000000003806 176.0
DYD1_k127_4017547_2 Copper binding proteins, plastocyanin/azurin family K02638 - - 0.00000000000000000000000534 109.0
DYD1_k127_4025865_0 Elongation factor G C-terminus K06207 - - 1.178e-194 615.0
DYD1_k127_4025865_1 Protein kinase domain K12132 - 2.7.11.1 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001137 352.0
DYD1_k127_4025865_2 Bacterial transcriptional activator domain K12132 - 2.7.11.1 0.00000000000000000000000000000000000000000000000000000001352 210.0
DYD1_k127_4025865_3 bacterial-type flagellum-dependent cell motility K03641 - - 0.0000000000000000000000000000004185 139.0
DYD1_k127_4025865_4 Kelch motif - - - 0.00000000000000000001953 104.0
DYD1_k127_4026806_0 MacB-like periplasmic core domain K02004 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001313 409.0
DYD1_k127_4026806_1 membrane, and an ATP-binding domain (NBD), which is responsible for energy generation. Confers resistance against macrolides K02003 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009376 337.0
DYD1_k127_4026806_2 Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family K02005,K13888 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001256 322.0
DYD1_k127_4026806_3 homoserine kinase activity K00872 GO:0000096,GO:0000097,GO:0003674,GO:0003824,GO:0004413,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006082,GO:0006520,GO:0006555,GO:0006566,GO:0006790,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0008652,GO:0009058,GO:0009066,GO:0009067,GO:0009069,GO:0009086,GO:0009088,GO:0009092,GO:0009987,GO:0016053,GO:0016301,GO:0016310,GO:0016740,GO:0016772,GO:0016773,GO:0019202,GO:0019752,GO:0040007,GO:0043436,GO:0044237,GO:0044238,GO:0044249,GO:0044272,GO:0044281,GO:0044283,GO:0044424,GO:0044444,GO:0044464,GO:0046394,GO:0071704,GO:1901564,GO:1901566,GO:1901576,GO:1901605,GO:1901607 2.7.1.39 0.0000000000000000000000000000000000000000000000002061 187.0
DYD1_k127_4026806_4 ECF sigma factor K03088 - - 0.0000000000000000000000000000000000006604 146.0
DYD1_k127_4026806_5 COG1502 Phosphatidylserine phosphatidylglycerophosphate cardiolipi n synthases and related enzymes K06131 - - 0.0000000000000000000000000006682 120.0
DYD1_k127_4026806_6 - - - - 0.0000000000000000000001749 108.0
DYD1_k127_4026806_7 Outer membrane efflux protein K12340 - - 0.00000000000000001223 96.0
DYD1_k127_4032224_0 RNA polymerase binding - - - 0.0 1111.0
DYD1_k127_4032224_1 Predicted permease YjgP/YjgQ family K11720 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007379 326.0
DYD1_k127_4032224_2 Predicted permease YjgP/YjgQ family K07091 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008813 321.0
DYD1_k127_4032224_3 Peptidase M28 - - - 0.0000000000000000000000000000000000000000000000000000000000000131 233.0
DYD1_k127_4041794_0 PFAM transposase IS116 IS110 IS902 family protein - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002849 459.0
DYD1_k127_4041794_1 PFAM peptidase S49 K04773 - - 0.0001929 48.0
DYD1_k127_4053650_0 Hydrogenase formation hypA family K04654 - - 1.948e-210 657.0
DYD1_k127_4053650_1 AIR synthase related protein, C-terminal domain K04655 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000006065 287.0
DYD1_k127_4053650_2 carbon dioxide binding K04653,K04656 - - 0.000000007043 57.0
DYD1_k127_406051_0 Histidine Phosphotransfer domain K05962 - 2.7.13.1 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003798 520.0
DYD1_k127_406051_1 Type II secretion system (T2SS), protein E, N-terminal domain K02454,K02652 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001969 400.0
DYD1_k127_406051_2 Prepilin-type N-terminal cleavage methylation domain K02456,K02650 - - 0.000001334 57.0
DYD1_k127_4088689_0 Transport of potassium into the cell K03549 GO:0003674,GO:0005215,GO:0005575,GO:0006810,GO:0006811,GO:0006812,GO:0006813,GO:0008150,GO:0008324,GO:0009987,GO:0015075,GO:0015077,GO:0015079,GO:0015318,GO:0015672,GO:0016020,GO:0022857,GO:0022890,GO:0030001,GO:0034220,GO:0046873,GO:0051179,GO:0051234,GO:0055085,GO:0071804,GO:0071805,GO:0098655,GO:0098660,GO:0098662 - 2.195e-246 775.0
DYD1_k127_4088689_1 Amidohydrolase family - - - 6.172e-225 708.0
DYD1_k127_4088689_2 Belongs to the RtcB family K14415 - 6.5.1.3 5.658e-199 634.0
DYD1_k127_4088689_3 PD-(D/E)XK nuclease superfamily - - - 0.00000000000000000000000000000001196 130.0
DYD1_k127_4088689_4 Activates the tRNA-splicing ligase complex by facilitating the enzymatic turnover of catalytic subunit RtcB. Acts by promoting the guanylylation of RtcB, a key intermediate step in tRNA ligation. Can also alter the NTP specificity of RtcB such that ATP, dGTP or ITP is used efficiently - - - 0.00000002945 57.0
DYD1_k127_4090487_0 Acyl-CoA synthetase (AMP-forming) AMP-acid ligase II K01897 - 6.2.1.3 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001063 543.0
DYD1_k127_4090487_1 deaminated base DNA N-glycosylase activity K21929 GO:0003674,GO:0003824,GO:0004844,GO:0005488,GO:0006139,GO:0006259,GO:0006281,GO:0006284,GO:0006725,GO:0006807,GO:0006950,GO:0006974,GO:0008150,GO:0008152,GO:0009987,GO:0016787,GO:0016798,GO:0016799,GO:0019104,GO:0033554,GO:0033958,GO:0034641,GO:0043170,GO:0044237,GO:0044238,GO:0044260,GO:0046483,GO:0048037,GO:0050896,GO:0051536,GO:0051539,GO:0051540,GO:0051716,GO:0071704,GO:0090304,GO:0097506,GO:0140097,GO:1901360 3.2.2.27 0.0000000000000000000000000000000000000000000000000000000000000000000000007771 258.0
DYD1_k127_4090487_2 ABC-type uncharacterized transport system - - - 0.000000000000000000000000000000000000000000000000000000386 219.0
DYD1_k127_4090487_3 ABC-2 family transporter protein K01992 - - 0.00000000000000000000000000000000008092 154.0
DYD1_k127_4090487_4 ABC transporter K01990 - - 0.00002135 48.0
DYD1_k127_4090487_5 Domain of unknown function (DUF4340) - - - 0.00002594 57.0
DYD1_k127_4090487_6 Domain of unkown function (DUF1775) - - - 0.00002969 55.0
DYD1_k127_4097783_0 it can initiate unwinding at a nick in the DNA. It binds to the single-stranded DNA and acts in a progressive fashion along the DNA in the 3' to 5' direction K03656 - 3.6.4.12 0.0000000000000000000000000000000000000000000000000000004201 221.0
DYD1_k127_4097783_1 Calcineurin-like phosphoesterase K07098 - - 0.000000000000000000000000000000000000000000000000000002048 206.0
DYD1_k127_4097783_10 Domain of unknown function(DUF2779) - - - 0.00007813 49.0
DYD1_k127_4097783_11 - - - - 0.0001465 50.0
DYD1_k127_4097783_12 Helix-turn-helix XRE-family like proteins - - - 0.0008989 42.0
DYD1_k127_4097783_2 - - - - 0.00000000000000000000000000000000000000005937 163.0
DYD1_k127_4097783_3 - - - - 0.000000000000000000000000000000000000002135 153.0
DYD1_k127_4097783_4 nucleotidyltransferase activity K00984 - 2.7.7.47 0.0000000000000000000000000000000000001253 154.0
DYD1_k127_4097783_5 - - - - 0.0000000000000000000000000004629 117.0
DYD1_k127_4097783_6 One of the essential components for the initiation of protein synthesis. Stabilizes the binding of IF-2 and IF-3 on the 30S subunit to which N-formylmethionyl-tRNA(fMet) subsequently binds. Helps modulate mRNA selection, yielding the 30S pre- initiation complex (PIC). Upon addition of the 50S ribosomal subunit IF-1, IF-2 and IF-3 are released leaving the mature 70S translation initation complex K02518 - - 0.0000000000000000000000000006318 115.0
DYD1_k127_4097783_7 Hsp20/alpha crystallin family K13993 - - 0.000000000000000000000003929 108.0
DYD1_k127_4097783_9 Fic/DOC family - - - 0.000002465 49.0
DYD1_k127_4120116_0 Dipeptidyl peptidase IV (DPP IV) N-terminal region - - - 2.221e-208 675.0
DYD1_k127_4120116_1 Belongs to the 'phage' integrase family - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004489 373.0
DYD1_k127_4126929_0 membrane protein (DUF2207) - GO:0005575,GO:0005623,GO:0005886,GO:0016020,GO:0044464,GO:0071944 - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005869 524.0
DYD1_k127_4126929_1 LemA family K03744 - - 0.000000000000000000000000000000000000000002811 163.0
DYD1_k127_4126929_2 Flavodoxin domain - - - 0.00000000000000000002492 103.0
DYD1_k127_4126929_3 Tetratricopeptide repeat - - - 0.000000000001079 75.0
DYD1_k127_413255_1 Di-haem cytochrome c peroxidase K00428 - 1.11.1.5 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009845 327.0
DYD1_k127_413255_2 AAA domain, putative AbiEii toxin, Type IV TA system K01990,K19340 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000002359 271.0
DYD1_k127_413255_3 Glucose / Sorbosone dehydrogenase K21430 - - 0.0000000000000000000000000000000000002504 142.0
DYD1_k127_413255_4 Involved in the tonB-independent uptake of proteins - - - 0.000000000000000000000000002808 119.0
DYD1_k127_413255_5 histidine kinase A domain protein - - - 0.0000000000001705 71.0
DYD1_k127_4137604_0 Belongs to the universal stress protein A family - - - 0.0000000000000000001722 98.0
DYD1_k127_4137604_1 Belongs to the peptidase S16 family - - - 0.00000000000000002025 83.0
DYD1_k127_4137604_2 Domain in cystathionine beta-synthase and other proteins. - - - 0.000000009053 58.0
DYD1_k127_4137710_0 4Fe-4S dicluster domain K00184 - - 5.729e-243 782.0
DYD1_k127_4137710_1 Polysulphide reductase, NrfD K00185 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002003 560.0
DYD1_k127_4137710_2 Pfam Polysulphide reductase, NrfD - - - 0.0000000000000000000000000000000000000000000000000000000000001283 234.0
DYD1_k127_4137710_3 Protein of unknown function (DUF3341) - - - 0.00000000000000000000000000000000001197 143.0
DYD1_k127_4137710_4 cytochrome c - - - 0.000000000000000000004429 102.0
DYD1_k127_4158179_0 Sigma-54 factor, Activator interacting domain (AID) K03092 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001391 478.0
DYD1_k127_4158179_1 ABC transporter K06861 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006366 419.0
DYD1_k127_4158179_2 - - - - 0.00000000000000000000000000000000000003939 159.0
DYD1_k127_4158179_3 Lipopolysaccharide-assembly, LptC-related - - - 0.000000000000000000000000427 113.0
DYD1_k127_4158179_4 DAHP synthetase I family K01627 - 2.5.1.55 0.0000004463 52.0
DYD1_k127_4176125_0 P2 response regulator binding domain K03407 - 2.7.13.3 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001185 462.0
DYD1_k127_4176125_1 Tetratricopeptide repeat - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005978 409.0
DYD1_k127_4176125_10 Responsible for synthesis of pseudouridine from uracil K06177,K06180 - 5.4.99.23,5.4.99.28,5.4.99.29 0.00004319 48.0
DYD1_k127_4176125_11 COG0457 FOG TPR repeat - - - 0.000198 53.0
DYD1_k127_4176125_2 Small GTP-binding protein K06883 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000006951 274.0
DYD1_k127_4176125_3 CheC-like family K03410 - - 0.00000000000000000000000000000000000000000000000000000000000000000000004429 246.0
DYD1_k127_4176125_4 Bacterial dnaA protein K02313 - - 0.00000000000000000000000000000000000000000000000000000000000000001153 235.0
DYD1_k127_4176125_5 cheY-homologous receiver domain K03413 - - 0.00000000000000000000000000000000000000000000000000000000000005641 214.0
DYD1_k127_4176125_6 Domain of unknown function (DUF4388) - - - 0.00000000000000000000000000000000003841 148.0
DYD1_k127_4176125_7 chemotaxis K03408 - - 0.0000002359 60.0
DYD1_k127_4176125_8 PFAM Roadblock LC7 family protein K07131 - - 0.0000007086 59.0
DYD1_k127_4176125_9 Roadblock/LC7 domain - - - 0.0000008912 61.0
DYD1_k127_4178743_0 NmrA-like family - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008665 357.0
DYD1_k127_4178743_1 ubiE/COQ5 methyltransferase family - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000001995 290.0
DYD1_k127_4178743_2 - - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000002383 293.0
DYD1_k127_4178743_3 - - - - 0.0000000000000000000000000000000004027 133.0
DYD1_k127_4178743_4 Histidine kinase-like ATPase domain - - - 0.000000000000162 75.0
DYD1_k127_4178743_5 Methyltransferase - - - 0.0000001309 60.0
DYD1_k127_4181208_0 domain, Protein K02519,K03832 - - 0.000000000000002539 91.0
DYD1_k127_41852_0 Catalyzes the GTP-dependent ribosomal translocation step during translation elongation. During this step, the ribosome changes from the pre-translocational (PRE) to the post- translocational (POST) state as the newly formed A-site-bound peptidyl-tRNA and P-site-bound deacylated tRNA move to the P and E sites, respectively. Catalyzes the coordinated movement of the two tRNA molecules, the mRNA and conformational changes in the ribosome K02355 - - 4.917e-284 887.0
DYD1_k127_41852_1 Domain of unknown function (DUF5117) - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001862 452.0
DYD1_k127_41852_2 This protein promotes the GTP-dependent binding of aminoacyl-tRNA to the A-site of ribosomes during protein biosynthesis K02358 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004521 347.0
DYD1_k127_41852_3 One of the primary rRNA binding proteins, it binds directly to 16S rRNA where it nucleates assembly of the head domain of the 30S subunit. Is located at the subunit interface close to the decoding center, probably blocks exit of the E-site tRNA K02992 - - 0.00000000000000000000000000000000000000000000000000000000000000000000001837 246.0
DYD1_k127_41852_4 Interacts with and stabilizes bases of the 16S rRNA that are involved in tRNA selection in the A site and with the mRNA backbone. Located at the interface of the 30S and 50S subunits, it traverses the body of the 30S subunit contacting proteins on the other side and probably holding the rRNA structure together. The combined cluster of proteins S8, S12 and S17 appears to hold together the shoulder and platform of the 30S subunit K02950 GO:0003674,GO:0003735,GO:0005198,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005840,GO:0006412,GO:0006518,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0019538,GO:0032991,GO:0034641,GO:0034645,GO:0040007,GO:0043043,GO:0043170,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044424,GO:0044444,GO:0044464,GO:0071704,GO:1901564,GO:1901566,GO:1901576,GO:1990904 - 0.000000000000000000000000000000000000000000000000000000000000007101 218.0
DYD1_k127_4227834_0 Phosphoglucose isomerase K00616,K13810 - 2.2.1.2,5.3.1.9 6.382e-245 776.0
DYD1_k127_4227834_1 PFAM FAD-dependent pyridine nucleotide-disulphide oxidoreductase K00520 - 1.16.1.1 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002327 558.0
DYD1_k127_4227834_10 hydroperoxide reductase activity - - - 0.0000000000000002669 82.0
DYD1_k127_4227834_11 - - - - 0.000000001414 65.0
DYD1_k127_4227834_12 Carboxymuconolactone decarboxylase family - - - 0.00000002116 67.0
DYD1_k127_4227834_2 Catalyzes the transfer of a two-carbon ketol group from a ketose donor to an aldose acceptor, via a covalent intermediate with the cofactor thiamine pyrophosphate K00615 - 2.2.1.1 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008247 482.0
DYD1_k127_4227834_3 Transketolase, thiamine diphosphate binding domain K00615 - 2.2.1.1 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000198 363.0
DYD1_k127_4227834_4 ROK family K00845 - 2.7.1.2 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000002908 285.0
DYD1_k127_4227834_5 Alkyl hydroperoxide reductase - - - 0.00000000000000000000000000000000000000000000000000000000000000000006169 241.0
DYD1_k127_4227834_6 Protein of unknown function (DUF1207) - - - 0.000000000000000000000000000000000000000000000000000000000000008109 224.0
DYD1_k127_4227834_7 Sigma-70, region 4 K03088 - - 0.00000000000000000000000000000000000000000006012 167.0
DYD1_k127_4227834_8 peptidyl-tyrosine sulfation - - - 0.000000000000000000000000000000000001504 145.0
DYD1_k127_4227834_9 Cyclic nucleotide-monophosphate binding domain K00384 - 1.8.1.9 0.0000000000000000003475 90.0
DYD1_k127_4242493_0 Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family K18138 - - 2.536e-236 754.0
DYD1_k127_4242493_1 Beta-eliminating lyase K01667 - 4.1.99.1 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003392 589.0
DYD1_k127_4242493_2 Cytochrome c - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007769 470.0
DYD1_k127_4242493_3 Transcriptional regulator - - - 0.00000000000000000000000000000000000000000000001214 179.0
DYD1_k127_4252359_0 Catalyzes the oxidation of glucose 6-phosphate to 6- phosphogluconolactone K00036 - 1.1.1.363,1.1.1.49 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002017 575.0
DYD1_k127_4252359_1 6-phosphogluconate dehydrogenase K00033 - 1.1.1.343,1.1.1.44 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001629 424.0
DYD1_k127_4252359_2 Phosphoglucose isomerase K00616,K13810 - 2.2.1.2,5.3.1.9 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000001445 294.0
DYD1_k127_4252359_3 Haloacid dehalogenase-like hydrolase K07025 - - 0.00000000000000000000000000000000000000000000000000002277 195.0
DYD1_k127_4265286_0 Belongs to the citrate synthase family K01647 - 2.3.3.1 5.708e-203 638.0
DYD1_k127_4265286_1 metallocarboxypeptidase activity K14054 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005829 497.0
DYD1_k127_4265286_2 Protein involved in outer membrane biogenesis - - - 0.000000000000000000000000000001911 139.0
DYD1_k127_4265286_3 Uncharacterized protein conserved in bacteria (DUF2062) - - - 0.0000000000000000000001563 104.0
DYD1_k127_4265286_4 transport - - - 0.00000000000000003737 90.0
DYD1_k127_4303892_0 Catalyzes the conversion of acetate into acetyl-CoA (AcCoA), an essential intermediate at the junction of anabolic and catabolic pathways. AcsA undergoes a two-step reaction. In the first half reaction, AcsA combines acetate with ATP to form acetyl-adenylate (AcAMP) intermediate. In the second half reaction, it can then transfer the acetyl group from AcAMP to the sulfhydryl group of CoA, forming the product AcCoA K01895 - 6.2.1.1 4.031e-256 804.0
DYD1_k127_4307819_0 Bacterial Ig-like domain - - - 0.00000000000000000000000000000000000000406 170.0
DYD1_k127_4307819_1 PFAM peptidase M55 D-aminopeptidase K16203 - - 0.000000000000000000000000000000000000006414 159.0
DYD1_k127_4307819_2 Membrane - - - 0.00000000000000000000000000000001582 139.0
DYD1_k127_4307819_3 Catalyzes the phosphorylation of ribose at O-5 in a reaction requiring ATP and magnesium. The resulting D-ribose-5- phosphate can then be used either for sythesis of nucleotides, histidine, and tryptophan, or as a component of the pentose phosphate pathway K00852 - 2.7.1.15 0.000000000000000000000008473 103.0
DYD1_k127_4307819_4 PKD domain - - - 0.0000000000000006288 94.0
DYD1_k127_4307819_5 Transcriptional regulator PadR-like family - - - 0.000000000000002318 80.0
DYD1_k127_4307819_6 determination of stomach left/right asymmetry - - - 0.000000000000005216 85.0
DYD1_k127_4312777_0 GMC oxidoreductase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002685 541.0
DYD1_k127_4312777_1 Serine threonine protein kinase K12132 - 2.7.11.1 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002545 481.0
DYD1_k127_4312777_2 ECF sigma factor - - - 0.0000000000000000000000000000000000000000000000000003059 193.0
DYD1_k127_4312777_3 (twin-arginine translocation) pathway signal - - - 0.00000000000000000000006869 106.0
DYD1_k127_4322249_0 Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family - - - 0.0 1032.0
DYD1_k127_4322249_1 Response regulator receiver - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001156 602.0
DYD1_k127_4322249_2 PAS domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001977 523.0
DYD1_k127_4322249_3 Outer membrane efflux protein K12340 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000003752 266.0
DYD1_k127_4322249_4 Barrel-sandwich domain of CusB or HlyD membrane-fusion - - - 0.000000000000000000000000000000000000000000000000000000000003087 223.0
DYD1_k127_4322249_5 L-asparaginase II - - - 0.000000000000000000000000000000000000000000000000000302 192.0
DYD1_k127_4322249_6 23S rRNA-intervening sequence protein - - - 0.000000000000000000000000000000000002575 141.0
DYD1_k127_4322249_7 Toxic component of a toxin-antitoxin (TA) module. An RNase K07065 GO:0003674,GO:0003824,GO:0004518,GO:0004519,GO:0004521,GO:0004540,GO:0006139,GO:0006401,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0009056,GO:0009057,GO:0009987,GO:0016070,GO:0016072,GO:0016075,GO:0016787,GO:0016788,GO:0019439,GO:0034641,GO:0034655,GO:0034660,GO:0034661,GO:0040008,GO:0043170,GO:0044237,GO:0044238,GO:0044248,GO:0044260,GO:0044265,GO:0044270,GO:0045926,GO:0046483,GO:0046700,GO:0048519,GO:0050789,GO:0065007,GO:0071704,GO:0090304,GO:0090305,GO:0090501,GO:0090502,GO:0140098,GO:1901360,GO:1901361,GO:1901575 - 0.00004667 52.0
DYD1_k127_437725_0 Aldehyde dehydrogenase family K00140 - 1.2.1.18,1.2.1.27 5.41e-205 648.0
DYD1_k127_437725_1 TIGRFAM Dihydroorotate dehydrogenase K17723 - 1.3.1.1 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004943 595.0
DYD1_k127_437725_10 - - - - 0.000000000000000000000000000000000000000000000000000000508 207.0
DYD1_k127_437725_11 GCN5-related N-acetyl-transferase K06975 - - 0.00000000000000001521 88.0
DYD1_k127_437725_2 Catalyzes the reversible transfer of the terminal phosphate of ATP to form a long-chain polyphosphate (polyP) K00937 - 2.7.4.1 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008034 595.0
DYD1_k127_437725_3 Amidohydrolase family K01464 - 3.5.2.2 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000069 557.0
DYD1_k127_437725_4 Permease for cytosine/purines, uracil, thiamine, allantoin K03457 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000228 566.0
DYD1_k127_437725_5 Carbon-nitrogen hydrolase K01431,K12251 - 3.5.1.53,3.5.1.6 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009252 512.0
DYD1_k127_437725_6 Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family K00823,K07250 - 2.6.1.19,2.6.1.22 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004481 510.0
DYD1_k127_437725_7 glutamate synthase K17722 - 1.3.1.1 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007961 394.0
DYD1_k127_437725_8 Histidine kinase A domain protein - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001506 399.0
DYD1_k127_437725_9 Type I phosphodiesterase / nucleotide pyrophosphatase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000001125 314.0
DYD1_k127_4380440_0 Responsible for synthesis of pseudouridine from uracil- 55 in the psi GC loop of transfer RNAs K03177 - 5.4.99.25 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004476 341.0
DYD1_k127_4380440_1 One of several proteins that assist in the late maturation steps of the functional core of the 30S ribosomal subunit. Associates with free 30S ribosomal subunits (but not with 30S subunits that are part of 70S ribosomes or polysomes). Required for efficient processing of 16S rRNA. May interact with the 5'-terminal helix region of 16S rRNA K02834 - - 0.000000000000000000001167 96.0
DYD1_k127_4382548_0 PFAM peptidase S15 K06978 - - 1.445e-264 831.0
DYD1_k127_4382548_1 Carbamoyl-phosphate synthetase large chain, oligomerisation domain K01955 - 6.3.5.5 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008824 571.0
DYD1_k127_4382548_10 Located at the top of the head of the 30S subunit, it contacts several helices of the 16S rRNA. In the 70S ribosome it contacts the 23S rRNA (bridge B1a) and protein L5 of the 50S subunit (bridge B1b), connecting the 2 subunits K02952 - - 0.0000000000000000000000000000000000000000000000000000001019 196.0
DYD1_k127_4382548_11 the 2 termini fold to resemble tRNA(Ala) and it encodes a tag peptide , a short internal open reading frame. During trans-translation Ala- aminoacylated tmRNA acts like a tRNA, entering the A-site of stalled ribosomes, displacing the stalled mRNA. The ribosome then switches to translate the ORF on the tmRNA K03664 - - 0.000000000000000000000000000000000000000000000000000005816 193.0
DYD1_k127_4382548_12 Located on the platform of the 30S subunit, it bridges several disparate RNA helices of the 16S rRNA. Forms part of the Shine-Dalgarno cleft in the 70S ribosome K02948 - - 0.000000000000000000000000000000000000000000000000000006092 199.0
DYD1_k127_4382548_13 Polysaccharide biosynthesis protein K15856 - 1.1.1.281 0.00000000000000000000000000000000000000000000000005657 198.0
DYD1_k127_4382548_14 Catalyzes the decarboxylation of orotidine 5'- monophosphate (OMP) to uridine 5'-monophosphate (UMP) K01591 - 4.1.1.23 0.00000000000000000000000000000000000000000000157 174.0
DYD1_k127_4382548_15 Ribosomal protein L17 K02879 - - 0.00000000000000000000000000000000000000001797 155.0
DYD1_k127_4382548_16 Belongs to the bacterial ribosomal protein bL28 family K02902 GO:0003674,GO:0003735,GO:0005198 - 0.000000000000000000001242 98.0
DYD1_k127_4382548_17 - - - - 0.00000000000000000002141 102.0
DYD1_k127_4382548_18 JAB/MPN domain - - - 0.000000000000000002415 86.0
DYD1_k127_4382548_19 Ribosomal protein L36 K02919 - - 0.0000000000000982 72.0
DYD1_k127_4382548_2 PFAM UBA THIF-type NAD FAD binding K21147 - 2.7.7.80,2.8.1.11 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000234 569.0
DYD1_k127_4382548_3 Band 7 protein K07192 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000011 541.0
DYD1_k127_4382548_4 Catalyzes the conversion of GDP-D-mannose to GDP-4- dehydro-6-deoxy-D-mannose K01711 - 4.2.1.47 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001978 507.0
DYD1_k127_4382548_5 DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates K03040 - 2.7.7.6 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003376 441.0
DYD1_k127_4382548_6 One of the primary rRNA binding proteins, it binds directly to 16S rRNA where it nucleates assembly of the body of the 30S subunit K02986 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000001872 293.0
DYD1_k127_4382548_7 ATP-grasp domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000001179 295.0
DYD1_k127_4382548_8 Belongs to the dihydroorotate dehydrogenase family. Type 1 subfamily K17828 - 1.3.1.14 0.000000000000000000000000000000000000000000000000000000000000000000000000000000002411 296.0
DYD1_k127_4382548_9 Ami_3 K01448 - 3.5.1.28 0.00000000000000000000000000000000000000000000000000000003656 222.0
DYD1_k127_4383923_0 Acyl-CoA dehydrogenase, C-terminal domain K00252 - 1.3.8.6 2.572e-199 627.0
DYD1_k127_4383923_1 5TM C-terminal transporter carbon starvation CstA K06200 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001759 595.0
DYD1_k127_4383923_2 Isocitrate/isopropylmalate dehydrogenase K00030 - 1.1.1.41 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001896 454.0
DYD1_k127_4383923_3 Enoyl-CoA hydratase K07537 - 4.2.1.100 0.00000000000000000000000000000000000000000000000000000000002756 218.0
DYD1_k127_4383923_4 Enoyl-(Acyl carrier protein) reductase K00059 - 1.1.1.100 0.00000000000000000000000000000000000000000000000000000000005641 216.0
DYD1_k127_4383923_5 Calcineurin-like phosphoesterase superfamily domain - - - 0.0000000000000000000000000000000000000000000000000000000001807 213.0
DYD1_k127_4383923_6 SprT-like family - - - 0.0000000000000000000000000000000000000003278 164.0
DYD1_k127_4391764_0 Bacterial regulatory protein, Fis family - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004206 586.0
DYD1_k127_4391764_1 Chain length determinant protein K16554 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004323 551.0
DYD1_k127_4391764_2 Catalyzes the first step in hexosamine metabolism, converting fructose-6P into glucosamine-6P using glutamine as a nitrogen source K00820 - 2.6.1.16 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002169 463.0
DYD1_k127_4391764_3 His Kinase A (phosphoacceptor) domain - - - 0.000000000000000000000000000000000000000000000000000000000000001688 233.0
DYD1_k127_4391764_4 Bacterial sugar transferase - - - 0.000000000000000000000000000000000000000000000000000000000000008513 225.0
DYD1_k127_4391764_5 response regulator receiver K03413 - - 0.00000000000000000000000002706 122.0
DYD1_k127_4403262_0 Prevents misfolding and promotes the refolding and proper assembly of unfolded polypeptides generated under stress conditions K04077 - - 2.975e-267 833.0
DYD1_k127_4403262_1 glutaminyl-tRNA K01886 - 6.1.1.18 7.59e-252 787.0
DYD1_k127_4403262_11 - - - - 0.00000000009672 70.0
DYD1_k127_4403262_12 PFAM blue (type 1) copper domain protein K00368 - 1.7.2.1 0.00001391 55.0
DYD1_k127_4403262_2 Histidine kinase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005313 473.0
DYD1_k127_4403262_3 Evidence 3 Function proposed based on presence of conserved amino acid motif, structural feature or limited homology - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003826 455.0
DYD1_k127_4403262_4 Catalyzes the attachment of glutamate to tRNA(Glu) in a two-step reaction glutamate is first activated by ATP to form Glu-AMP and then transferred to the acceptor end of tRNA(Glu) K01885 - 6.1.1.17 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002631 421.0
DYD1_k127_4403262_5 Helix-turn-helix XRE-family like proteins - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005608 360.0
DYD1_k127_4403262_6 Binds to Cpn60 in the presence of Mg-ATP and suppresses the ATPase activity of the latter K04078 - - 0.000000000000000000000000000000000003531 141.0
DYD1_k127_4403262_7 - - - - 0.0000000000000000000000000006437 117.0
DYD1_k127_4403262_8 alkyl hydroperoxide reductase Thiol specific antioxidant Mal allergen K02199 - - 0.000000000000000000004698 109.0
DYD1_k127_4414892_0 radical SAM domain protein - - - 3.219e-207 656.0
DYD1_k127_4414892_1 Acyclic terpene utilisation family protein AtuA - - - 3.966e-201 641.0
DYD1_k127_4414892_10 - - - - 0.0000000000000000000000000000000000000000000004889 168.0
DYD1_k127_4414892_11 Phosphate acyltransferases K00655 - 2.3.1.51 0.00000000000000000001727 104.0
DYD1_k127_4414892_12 permease K06901 GO:0003674,GO:0005215,GO:0005345,GO:0005575,GO:0005623,GO:0005886,GO:0006810,GO:0006811,GO:0006812,GO:0006863,GO:0008150,GO:0008324,GO:0015075,GO:0015077,GO:0015078,GO:0015205,GO:0015207,GO:0015291,GO:0015293,GO:0015294,GO:0015295,GO:0015318,GO:0015672,GO:0015851,GO:0015853,GO:0016020,GO:0022804,GO:0022857,GO:0022890,GO:0034220,GO:0044464,GO:0051179,GO:0051234,GO:0055085,GO:0071702,GO:0071705,GO:0071944,GO:0072530,GO:0098655,GO:0098660,GO:0098662,GO:1902600,GO:1904823 - 0.0000000000000000004025 96.0
DYD1_k127_4414892_2 Permease family K06901 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005053 351.0
DYD1_k127_4414892_3 Carboxyl transferase domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001238 331.0
DYD1_k127_4414892_4 ATP-dependent DNA helicase K03654 - 3.6.4.12 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007558 325.0
DYD1_k127_4414892_5 Metallo-beta-lactamase superfamily - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001074 322.0
DYD1_k127_4414892_6 Subtilase family - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000001445 326.0
DYD1_k127_4414892_7 Radical SAM K18563 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000004525 304.0
DYD1_k127_4414892_8 Belongs to the enoyl-CoA hydratase isomerase family K13766 - 4.2.1.18 0.00000000000000000000000000000000000000000000000000000000009801 215.0
DYD1_k127_4414892_9 WD40-like Beta Propeller Repeat K03641,K07277 - - 0.0000000000000000000000000000000000000000000001694 177.0
DYD1_k127_4433635_0 Two component, sigma54 specific, transcriptional regulator, Fis family K02481,K07713 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006117 386.0
DYD1_k127_4433635_1 PFAM NAD dependent epimerase dehydratase family K08679 - 5.1.3.6 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008109 341.0
DYD1_k127_4433635_2 Chain length determinant protein K16554 - - 0.0000000000000000000000000000000000000000000000000000894 208.0
DYD1_k127_4433635_3 Biotin carboxylase - - - 0.000000000000000000000005772 108.0
DYD1_k127_4442643_0 Peptidase family M49 - - - 5.454e-204 659.0
DYD1_k127_4442643_1 lysine biosynthetic process via aminoadipic acid - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005791 542.0
DYD1_k127_4442643_2 FecCD transport family K02013,K02015 - 3.6.3.34 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001664 343.0
DYD1_k127_4442643_3 Periplasmic binding protein K02016 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000008478 260.0
DYD1_k127_4442643_4 ABC transporter K02013 - 3.6.3.34 0.000000000000000000000000000000000000004919 155.0
DYD1_k127_444706_0 peroxiredoxin activity - - - 5.209e-229 718.0
DYD1_k127_444706_1 electron transport chain K00347,K03614,K21163 - 1.6.5.8 0.00000000000000000000000000000000000000000000000000000000000000000000000000448 271.0
DYD1_k127_4461945_0 In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity K02335 - 2.7.7.7 6.321e-315 990.0
DYD1_k127_4461945_1 Drug exporters of the RND superfamily K06994,K07003,K20466,K20470 GO:0005575,GO:0005576,GO:0005618,GO:0005623,GO:0005886,GO:0005887,GO:0006810,GO:0006869,GO:0008150,GO:0009273,GO:0009987,GO:0010876,GO:0015920,GO:0016020,GO:0016021,GO:0030312,GO:0031224,GO:0031226,GO:0033036,GO:0040007,GO:0042546,GO:0044085,GO:0044425,GO:0044459,GO:0044464,GO:0051179,GO:0051234,GO:0071554,GO:0071702,GO:0071766,GO:0071840,GO:0071944,GO:1901264 - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004159 373.0
DYD1_k127_4461945_2 lytic transglycosylase activity K08309 GO:0000270,GO:0003674,GO:0003824,GO:0005575,GO:0005618,GO:0005623,GO:0006022,GO:0006026,GO:0006027,GO:0006807,GO:0008150,GO:0008152,GO:0008932,GO:0008933,GO:0009056,GO:0009057,GO:0009253,GO:0009274,GO:0016740,GO:0016757,GO:0030203,GO:0030288,GO:0030312,GO:0030313,GO:0031975,GO:0042597,GO:0043170,GO:0044464,GO:0061783,GO:0071704,GO:0071944,GO:1901135,GO:1901136,GO:1901564,GO:1901565,GO:1901575 - 0.0000000000000000000000000000000008702 149.0
DYD1_k127_4461945_3 - - - - 0.00000000000000000000001043 105.0
DYD1_k127_4461945_4 Matrixin - - - 0.000000000000000003815 92.0
DYD1_k127_4461945_5 dolichyl monophosphate biosynthetic process K08591 - 2.3.1.15 0.00000003429 63.0
DYD1_k127_4485386_0 Dienelactone hydrolase family - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000231 489.0
DYD1_k127_4485386_1 Ankyrin repeat - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000005054 296.0
DYD1_k127_4485386_2 TRANSFER protein K20266 - - 0.00000000000000000000000000000000000000000000000000000000000000000000001387 247.0
DYD1_k127_4485386_3 conjugation TrbI family protein K20533 - - 0.0000000000000000000000002881 104.0
DYD1_k127_4485386_4 - - - - 0.00000000006414 75.0
DYD1_k127_4500318_0 Bacterial regulatory protein, Fis family - - - 0.0000000000000000000000000000000000000000000000000000000001905 216.0
DYD1_k127_4500318_1 Bacterial type II and III secretion system protein K02453 - - 0.0000000000000000000000000000000000000000000000000000002189 218.0
DYD1_k127_4500318_2 TIGRFAM RHS repeat-associated core domain - - - 0.00000000000000000000000000000000000001568 168.0
DYD1_k127_4500318_3 General secretion pathway protein K02459 - - 0.000009471 55.0
DYD1_k127_4500318_4 general secretion pathway protein K02457 - - 0.0003164 47.0
DYD1_k127_4500318_5 Type II secretion system (T2SS), protein M subtype b - - - 0.000318 53.0
DYD1_k127_4508378_0 Adenylyltransferase that mediates the addition of adenosine 5'-monophosphate (AMP) to specific residues of target proteins - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007857 413.0
DYD1_k127_4508378_1 PPIases accelerate the folding of proteins. It catalyzes the cis-trans isomerization of proline imidic peptide bonds in oligopeptides K03767,K03768 - 5.2.1.8 0.00000000000000000000000000000000000000000000000000000000000000000000000001204 260.0
DYD1_k127_4508378_3 - K09712 - - 0.000000000000002894 85.0
DYD1_k127_4508378_4 glyoxalase III activity - - - 0.00000000001717 67.0
DYD1_k127_4522382_0 Glucosamine-6-phosphate isomerases/6-phosphogluconolactonase K02564 - 3.5.99.6 4.441e-241 765.0
DYD1_k127_4522382_1 hydrolase activity, hydrolyzing O-glycosyl compounds K01176 GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0044424,GO:0044464 3.2.1.1 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002755 612.0
DYD1_k127_4522382_10 PFAM DNA RNA tunnel of bacterial DNA dependent RNA polymerase - - - 0.00009822 47.0
DYD1_k127_4522382_2 - - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003109 621.0
DYD1_k127_4522382_3 Periplasmic binding proteins and sugar binding domain of LacI family - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007868 416.0
DYD1_k127_4522382_4 haloacid dehalogenase-like hydrolase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000611 325.0
DYD1_k127_4522382_5 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily - - - 0.00000000000000000000000000000000000000000000000000000000000008257 214.0
DYD1_k127_4522382_6 Glucose / Sorbosone dehydrogenase - - - 0.000000000000000000000000000000000000000000000000000003831 212.0
DYD1_k127_4522382_7 GMC oxidoreductase - - - 0.000000000000000000000000000000000000000003122 156.0
DYD1_k127_4522382_8 - - - - 0.00000001238 63.0
DYD1_k127_4522382_9 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily - - - 0.0000005895 58.0
DYD1_k127_4535846_0 RHS Repeat - - - 0.000000000001116 82.0
DYD1_k127_4572725_0 Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family - - - 0.00000000000000000000000000000000000000000000000000000000002398 210.0
DYD1_k127_4572725_1 membrane protein (DUF2078) K08982 - - 0.00000000002404 70.0
DYD1_k127_4572725_2 Belongs to the P(II) protein family K04751,K04752 - - 0.000000007367 66.0
DYD1_k127_4597433_0 Carboxypeptidase - - - 0.0000000000000000000000000000000000000000000000000000000000009388 219.0
DYD1_k127_4597433_1 phosphatase - - - 0.00000000000000000000000000000000000002346 151.0
DYD1_k127_4597433_2 self proteolysis K15125 - - 0.000000000000000001596 89.0
DYD1_k127_4625602_0 TonB-dependent receptor - - - 1.79e-281 901.0
DYD1_k127_4625602_1 ABC transporter transmembrane region - - - 1.253e-221 699.0
DYD1_k127_4625602_2 Metallopeptidase family M24 - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007125 374.0
DYD1_k127_4625602_3 Starch-binding associating with outer membrane - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000001195 271.0
DYD1_k127_4625602_4 - - - - 0.00000000000000000005042 98.0
DYD1_k127_4625602_6 - - - - 0.0000000001309 65.0
DYD1_k127_4633226_0 Protein kinase domain K12132 - 2.7.11.1 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009271 533.0
DYD1_k127_4633226_1 serine threonine protein kinase K12132 - 2.7.11.1 0.00000000000000000000000000000000000000000001181 186.0
DYD1_k127_4633226_2 Serine Threonine protein kinase - - - 0.0000000000000000000000000000000000000000007078 163.0
DYD1_k127_4633226_3 Pkd domain containing protein - - - 0.0000168 47.0
DYD1_k127_4648322_0 CHAT domain - - - 0.0000000000116 69.0
DYD1_k127_4651547_0 efflux transmembrane transporter activity - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006746 378.0
DYD1_k127_4651547_1 Domain of unknown function (DUF4342) - - - 0.0000000000000003966 86.0
DYD1_k127_4651547_2 - - - - 0.000001773 55.0
DYD1_k127_4663747_0 Catalyzes the conversion of urocanate to 4-imidazolone- 5-propionate K01712 - 4.2.1.49 9.553e-266 836.0
DYD1_k127_4663747_1 Aromatic amino acid lyase K01745 - 4.3.1.3 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005645 506.0
DYD1_k127_4663747_10 Domain of unknown function (DUF4321) - - - 0.00000000000000000004529 98.0
DYD1_k127_4663747_11 Part of the twin-arginine translocation (Tat) system that transports large folded proteins containing a characteristic twin-arginine motif in their signal peptide across membranes. TatA could form the protein-conducting channel of the Tat system K03116 - - 0.00000000001205 67.0
DYD1_k127_4663747_2 Amidohydrolase family K01468 - 3.5.2.7 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001537 401.0
DYD1_k127_4663747_3 SurA N-terminal domain K03770 - 5.2.1.8 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003069 394.0
DYD1_k127_4663747_4 Creatinase/Prolidase N-terminal domain K01262 - 3.4.11.9 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009871 352.0
DYD1_k127_4663747_5 Polyprenyl synthetase K02523 - 2.5.1.90 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002895 338.0
DYD1_k127_4663747_6 Tetratricopeptide repeat - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000003663 283.0
DYD1_k127_4663747_7 Involved in peptide bond synthesis. Stimulates efficient translation and peptide-bond synthesis on native or reconstituted 70S ribosomes in vitro. Probably functions indirectly by altering the affinity of the ribosome for aminoacyl-tRNA, thus increasing their reactivity as acceptors for peptidyl transferase K02356 GO:0003674,GO:0003676,GO:0003723,GO:0003746,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006412,GO:0006414,GO:0006518,GO:0006807,GO:0008135,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0019538,GO:0034641,GO:0034645,GO:0043043,GO:0043170,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044424,GO:0044464,GO:0071704,GO:0097159,GO:1901363,GO:1901564,GO:1901566,GO:1901576 - 0.0000000000000000000000000000000000000000000000000000000001092 209.0
DYD1_k127_4663747_8 Catalyzes a trans-dehydration via an enolate intermediate K03786 - 4.2.1.10 0.00000000000000000000000000000000000000000001627 166.0
DYD1_k127_4663747_9 Tetratricopeptide repeat - - - 0.00000000000000000003122 106.0
DYD1_k127_4677759_0 CarboxypepD_reg-like domain - - - 2.246e-293 931.0
DYD1_k127_4677759_1 efflux transmembrane transporter activity - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001336 452.0
DYD1_k127_4677759_2 SusD family K21572 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005198 413.0
DYD1_k127_4677759_3 Cys/Met metabolism PLP-dependent enzyme - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001134 411.0
DYD1_k127_4677759_4 ABC transporter K02003 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000004335 290.0
DYD1_k127_4677759_5 transporter - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000002069 291.0
DYD1_k127_4677759_6 Biotin-lipoyl like - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000001612 296.0
DYD1_k127_4677759_7 negative regulation of transcription, DNA-templated - - - 0.0000000000000000000000000000001259 129.0
DYD1_k127_4677759_8 transporter - - - 0.000000000000000000000000000003093 130.0
DYD1_k127_4677759_9 - - - - 0.00000183 59.0
DYD1_k127_4693622_0 NAD(P)H quinone oxidoreductase, PIG3 family - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000001327 286.0
DYD1_k127_4693622_1 Glycosyl hydrolases family 38 N-terminal domain K01191,K15524 - 3.2.1.170,3.2.1.24 0.000000000000000000000000000000000000000001434 161.0
DYD1_k127_4693622_2 Serine/Threonine protein kinases, catalytic domain K12132 - 2.7.11.1 0.00000000000000000000000006111 120.0
DYD1_k127_4693622_3 Belongs to the peptidase S1C family K04771 GO:0003674,GO:0003824,GO:0004175,GO:0004252,GO:0005575,GO:0005623,GO:0006508,GO:0006807,GO:0008150,GO:0008152,GO:0008233,GO:0008236,GO:0016787,GO:0017171,GO:0019538,GO:0030288,GO:0030313,GO:0031975,GO:0042597,GO:0043170,GO:0044238,GO:0044464,GO:0070011,GO:0071704,GO:0140096,GO:1901564 3.4.21.107 0.00000000001901 78.0
DYD1_k127_4693622_4 ABC-2 type transporter K01990,K21397 - - 0.000000001211 72.0
DYD1_k127_4693622_5 Catalyzes the reversible interconversion of serine and glycine with tetrahydrofolate (THF) serving as the one-carbon carrier. This reaction serves as the major source of one-carbon groups required for the biosynthesis of purines, thymidylate, methionine, and other important biomolecules. Also exhibits THF- independent aldolase activity toward beta-hydroxyamino acids, producing glycine and aldehydes, via a retro-aldol mechanism K00600 - 2.1.2.1 0.0004827 44.0
DYD1_k127_4698834_0 1-phosphatidylinositol-4-phosphate 5-kinase activity - - - 0.0000000000000000000000000000000000000000000000004666 187.0
DYD1_k127_4729734_0 efflux transmembrane transporter activity K02004 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002249 548.0
DYD1_k127_4729734_1 Belongs to the HpcH HpaI aldolase family - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001126 507.0
DYD1_k127_4729734_10 Ohcu decarboxylase K16840 - 4.1.1.97 0.000000000000000000000000000000000000000000005062 169.0
DYD1_k127_4729734_11 [2Fe-2S] binding domain K03518,K13483 - 1.2.5.3 0.00000000000000000000000000000000000000002878 157.0
DYD1_k127_4729734_12 negative regulation of transcription, DNA-templated - - - 0.0000000000000000000000000000000000005769 141.0
DYD1_k127_4729734_13 Transthyretin K07127 - 3.5.2.17 0.0000000000000000000000000000002849 130.0
DYD1_k127_4729734_14 Protein of unknown function (DUF1499) - - - 0.0000000000000000000000000002894 123.0
DYD1_k127_4729734_15 membrane - - - 0.0000000000000000000004727 98.0
DYD1_k127_4729734_16 His Kinase A (phosphoacceptor) domain - - - 0.0000000000000000000339 100.0
DYD1_k127_4729734_17 23S rRNA-intervening sequence protein - - - 0.000946 44.0
DYD1_k127_4729734_2 Bacterial regulatory protein, Fis family - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001298 507.0
DYD1_k127_4729734_3 Amidohydrolase family K01466 - 3.5.2.5 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001256 502.0
DYD1_k127_4729734_4 Belongs to the allantoicase family K01477 - 3.5.3.4 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002179 419.0
DYD1_k127_4729734_5 Urate oxidase N-terminal - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002418 336.0
DYD1_k127_4729734_6 NmrA-like family - - - 0.0000000000000000000000000000000000000000000000000000000000004121 222.0
DYD1_k127_4729734_7 aldehyde oxidase and xanthine dehydrogenase, a b hammerhead K03520 - 1.2.5.3 0.000000000000000000000000000000000000000000000000000000006556 203.0
DYD1_k127_4729734_8 Sigma-70, region 4 K02405 - - 0.0000000000000000000000000000000000000000000000000001111 196.0
DYD1_k127_4729734_9 CO dehydrogenase flavoprotein C-terminal domain K13479 - 1.17.1.4 0.000000000000000000000000000000000000000000000002587 184.0
DYD1_k127_4730943_0 Surface antigen K07277 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001033 377.0
DYD1_k127_4730943_1 PFAM Peptidase S13, D-Ala-D-Ala carboxypeptidase C K07259 - 3.4.16.4 0.000000000000000000000000000000000000000000000000000000000000000000000000005692 273.0
DYD1_k127_4730943_2 TamB, inner membrane protein subunit of TAM complex K09800 - - 0.000000000000000001842 100.0
DYD1_k127_4738752_0 Catalyzes the ATP-dependent amination of UTP to CTP with either L-glutamine or ammonia as the source of nitrogen. Regulates intracellular CTP levels through interactions with the four ribonucleotide triphosphates K01937 - 6.3.4.2 1.442e-260 817.0
DYD1_k127_4738752_1 Radical SAM enzyme that catalyzes the cyclization of dehypoxanthine futalosine (DHFL) into cyclic dehypoxanthine futalosine (CDHFL), a step in the biosynthesis of menaquinone (MK, vitamin K2) K11784 - 1.21.98.1 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001047 554.0
DYD1_k127_4738752_10 KR domain K00059 - 1.1.1.100 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000001996 292.0
DYD1_k127_4738752_11 Acyl transferase domain K00645 - 2.3.1.39 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000002263 298.0
DYD1_k127_4738752_12 TIGRFAM glutamine amidotransferase of anthranilate synthase K01658 - 4.1.3.27 0.0000000000000000000000000000000000000000000000000000000000000000000000005438 256.0
DYD1_k127_4738752_13 Involved in the biosynthesis of isopentenyl diphosphate (IPP) and dimethylallyl diphosphate (DMAPP), two major building blocks of isoprenoid compounds. Catalyzes the conversion of 4- diphosphocytidyl-2-C-methyl-D-erythritol 2-phosphate (CDP-ME2P) to 2-C-methyl-D-erythritol 2,4-cyclodiphosphate (ME-CPP) with a corresponding release of cytidine 5-monophosphate (CMP) K01770 - 4.6.1.12 0.00000000000000000000000000000000000000000000001528 175.0
DYD1_k127_4738752_14 NDK K00940 - 2.7.4.6 0.00000000000000000000000000000000000000000000726 170.0
DYD1_k127_4738752_15 Activates KDO (a required 8-carbon sugar) for incorporation into bacterial lipopolysaccharide in Gram-negative bacteria K00979 - 2.7.7.38 0.000000000000000000000000000000000000000003184 165.0
DYD1_k127_4738752_16 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 - - - 0.000000000000000000000000000000000000009102 152.0
DYD1_k127_4738752_17 Catalyzes the conversion of N5-carboxyaminoimidazole ribonucleotide (N5-CAIR) to 4-carboxy-5-aminoimidazole ribonucleotide (CAIR) K01588 - 5.4.99.18 0.00000000000000000000000000000000000005097 146.0
DYD1_k127_4738752_18 SNARE associated Golgi protein - - - 0.00000000000000000000000000001655 125.0
DYD1_k127_4738752_19 Uncharacterized ACR, COG1399 K07040 - - 0.00000000000000000000000001943 115.0
DYD1_k127_4738752_2 Catalyzes the condensation reaction of fatty acid synthesis by the addition to an acyl acceptor of two carbons from malonyl-ACP K09458 - 2.3.1.179 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009323 516.0
DYD1_k127_4738752_20 Carrier of the growing fatty acid chain in fatty acid biosynthesis K02078 - - 0.00000000000000000000000002271 111.0
DYD1_k127_4738752_21 Ribosomal L32p protein family K02911 - - 0.0000000000000000000008901 98.0
DYD1_k127_4738752_3 Elongator protein 3, MiaB family, Radical SAM K18285 - 2.5.1.120 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003024 505.0
DYD1_k127_4738752_4 Aminotransferase class I and II K10907 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009486 462.0
DYD1_k127_4738752_5 Phage integrase, N-terminal SAM-like domain K04763 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007112 396.0
DYD1_k127_4738752_6 Catalyzes the condensation reaction of fatty acid synthesis by the addition to an acyl acceptor of two carbons from malonyl-ACP. Catalyzes the first condensation reaction which initiates fatty acid synthesis and may therefore play a role in governing the total rate of fatty acid production. Possesses both acetoacetyl-ACP synthase and acetyl transacylase activities. Its substrate specificity determines the biosynthesis of branched- chain and or straight-chain of fatty acids K00648 - 2.3.1.180 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000498 385.0
DYD1_k127_4738752_7 Catalyzes the reversible formation of acyl-phosphate (acyl-PO(4)) from acyl- acyl-carrier-protein (acyl-ACP). This enzyme utilizes acyl-ACP as fatty acyl donor, but not acyl-CoA K03621 - 2.3.1.15 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001428 343.0
DYD1_k127_4738752_8 Catalyzes the dehydration of chorismate into 3- (1- carboxyvinyl)oxy benzoate, a step in the biosynthesis of menaquinone (MK, vitamin K2) K11782 - 4.2.1.151 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000001731 302.0
DYD1_k127_4738752_9 DAHP synthetase I family K01627 - 2.5.1.55 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000001146 291.0
DYD1_k127_4741622_0 GMC oxidoreductase - - - 5.21e-278 865.0
DYD1_k127_4741622_1 Gluconate 2-dehydrogenase subunit 3 - - - 0.000005492 49.0
DYD1_k127_4743423_0 phosphorelay signal transduction system K07713 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002818 406.0
DYD1_k127_4743423_1 Cytochrome C biogenesis protein transmembrane region K04084 - 1.8.1.8 0.000000000000000000000000000000000000000000000000000000000000002976 224.0
DYD1_k127_4743423_2 Endonuclease that specifically degrades the RNA of RNA- DNA hybrids K03470 - 3.1.26.4 0.00000000000000000000000000000000000000000000000000000009394 200.0
DYD1_k127_4743423_3 - - - - 0.000000000000000000000000000009011 137.0
DYD1_k127_4743423_4 SWI complex, BAF60b domains - - - 0.0000000000000000000000000001088 129.0
DYD1_k127_4743423_5 COG1670 acetyltransferases, including N-acetylases of ribosomal proteins - - - 0.00000000000000000005315 96.0
DYD1_k127_4743423_6 ADP binding - - - 0.000000005378 68.0
DYD1_k127_4744783_0 PFAM oxidoreductase, molybdopterin binding - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000746 248.0
DYD1_k127_4744783_2 photosynthesis K02453,K20543 - - 0.000000000000000000000000000000000000001383 163.0
DYD1_k127_4744783_3 DNA internalization-related competence protein ComEC Rec2 - - - 0.0000000002169 68.0
DYD1_k127_4745083_0 2Fe-2S -binding - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000008349 278.0
DYD1_k127_4745083_1 xanthine dehydrogenase a b hammerhead K11177 - 1.17.1.4 0.00000000000000000000000000000000000000000000000000000000001468 210.0
DYD1_k127_4765522_0 Toxic component of a toxin-antitoxin (TA) module. An RNase - - - 0.000000000000000000000000000000003664 132.0
DYD1_k127_4765522_1 DNA restriction-modification system - - - 0.00000000000000000004692 99.0
DYD1_k127_4765522_2 Bacterial antitoxin of type II TA system, VapB - - - 0.0000000000000007111 81.0
DYD1_k127_4765522_3 NHL repeat - - - 0.0008778 50.0
DYD1_k127_4768362_0 UDP-4-amino-4-deoxy-L-arabinose aminotransferase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000455 514.0
DYD1_k127_4768362_1 two component, sigma54 specific, transcriptional regulator, Fis family K02481,K07713 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002054 381.0
DYD1_k127_4768362_2 Bacterial sugar transferase - - - 0.0000000000000000000000000000000000000000000000000000006869 214.0
DYD1_k127_4768362_3 COG2204 Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains K10943 - - 0.000000001717 67.0
DYD1_k127_4768362_4 Polysaccharide biosynthesis/export protein K01991 - - 0.0000003744 63.0
DYD1_k127_4768362_5 PAS fold - - - 0.0001245 54.0
DYD1_k127_4783276_0 repeat protein - - - 2.51e-213 690.0
DYD1_k127_4783276_1 TIGRFAM diguanylate cyclase (GGDEF) domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008849 441.0
DYD1_k127_4783276_10 Enoyl-CoA hydratase/isomerase K01692 - 4.2.1.17 0.000000000000000000000000000000000000000000000000000000000004838 224.0
DYD1_k127_4783276_11 Glycosyltransferase like family 2 - - - 0.0000000000000000000000000000000000000000000000004674 183.0
DYD1_k127_4783276_12 Serine aminopeptidase, S33 - - - 0.000000000000000000000000000000000000000003356 169.0
DYD1_k127_4783276_13 - - - - 0.000000000000000000000000000000000000000005661 160.0
DYD1_k127_4783276_14 Protein of unknown function (DUF1761) - - - 0.000000000000000000000000000000000000003235 150.0
DYD1_k127_4783276_15 Protein of unknown function (DUF521) K09123 - - 0.0000000000000000000000000001951 123.0
DYD1_k127_4783276_16 - - - - 0.0000000000000000002267 99.0
DYD1_k127_4783276_17 - - - - 0.0000000000003322 78.0
DYD1_k127_4783276_18 - - - - 0.000000000002747 70.0
DYD1_k127_4783276_19 Tetratricopeptide repeat - - - 0.0000000004596 73.0
DYD1_k127_4783276_2 Protein of unknown function (DUF521) K09123 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000017 421.0
DYD1_k127_4783276_20 PFAM secretion protein HlyD family protein - - - 0.000974 53.0
DYD1_k127_4783276_3 Mate efflux family protein - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001049 381.0
DYD1_k127_4783276_4 Threonine/Serine exporter, ThrE - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000315 361.0
DYD1_k127_4783276_5 amine dehydrogenase activity - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000009577 303.0
DYD1_k127_4783276_6 Beta-lactamase - - - 0.00000000000000000000000000000000000000000000000000000000000000000004907 252.0
DYD1_k127_4783276_7 Enoyl-(Acyl carrier protein) reductase - - - 0.00000000000000000000000000000000000000000000000000000000000000000007803 240.0
DYD1_k127_4783276_8 membrane organization - - - 0.00000000000000000000000000000000000000000000000000000000000001676 242.0
DYD1_k127_4783276_9 Bacterial regulatory proteins, tetR family K16137 - - 0.0000000000000000000000000000000000000000000000000000000000005994 217.0
DYD1_k127_4786024_0 AAA domain, putative AbiEii toxin, Type IV TA system K01990 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001098 313.0
DYD1_k127_4786024_1 COG0842 ABC-type multidrug transport system, permease component K01992 - - 0.00000000000000000000000000006603 124.0
DYD1_k127_480796_0 Acetyl xylan esterase (AXE1) - - - 3.15e-289 906.0
DYD1_k127_480796_1 PLD-like domain - - - 0.000000009421 68.0
DYD1_k127_4825372_0 Cytochrome c - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009154 310.0
DYD1_k127_4825372_1 amine dehydrogenase activity - - - 0.0000000000000000000000000000000000000000000000000000000000000000003044 241.0
DYD1_k127_4825372_2 Cytochrome c - - - 0.000000000000000000000000000000002427 141.0
DYD1_k127_4833995_0 Serine threonine protein kinase K12132 - 2.7.11.1 0.0000000000000000000000000000000000000000000000000000000000000155 236.0
DYD1_k127_4833995_1 NifU-like N terminal domain K04488 - - 0.000000000000000000000000000000771 126.0
DYD1_k127_4853461_0 Alpha-amylase domain K05343 - 3.2.1.1,5.4.99.16 0.0 1386.0
DYD1_k127_4853461_1 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) K01214 - 3.2.1.68 1.414e-282 886.0
DYD1_k127_4853461_2 hydrolase activity, hydrolyzing O-glycosyl compounds K16147 - 2.4.99.16 1.395e-271 852.0
DYD1_k127_4853461_3 Catalyzes the formation of the alpha-1,6-glucosidic linkages in glycogen by scission of a 1,4-alpha-linked oligosaccharide from growing alpha-1,4-glucan chains and the subsequent attachment of the oligosaccharide to the alpha-1,6 position K00700 - 2.4.1.18 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005777 333.0
DYD1_k127_485506_0 Transport of potassium into the cell K03549 GO:0003674,GO:0005215,GO:0005575,GO:0006810,GO:0006811,GO:0006812,GO:0006813,GO:0008150,GO:0008324,GO:0009987,GO:0015075,GO:0015077,GO:0015079,GO:0015318,GO:0015672,GO:0016020,GO:0022857,GO:0022890,GO:0030001,GO:0034220,GO:0046873,GO:0051179,GO:0051234,GO:0055085,GO:0071804,GO:0071805,GO:0098655,GO:0098660,GO:0098662 - 1.654e-255 808.0
DYD1_k127_485506_1 DNA polymerase III is a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria. This DNA polymerase also exhibits 3' to 5' exonuclease activity K02343 - 2.7.7.7 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005725 436.0
DYD1_k127_485506_2 Low-affinity potassium transport system. Interacts with Trk system potassium uptake protein TrkA K03498 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006131 390.0
DYD1_k127_485506_3 Beta-eliminating lyase K01620 - 4.1.2.48 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003981 326.0
DYD1_k127_485506_4 PFAM TrkA-N domain protein K03499 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004362 331.0
DYD1_k127_485506_5 Virulence factor BrkB K07058 - - 0.0000000000000000000000000000001179 133.0
DYD1_k127_4864837_0 Multicopper oxidase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006597 550.0
DYD1_k127_4864837_1 membrane - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002166 338.0
DYD1_k127_4864837_2 palmitoyl-(protein) hydrolase activity K06999 - - 0.00000000000000000000000000000000000009827 160.0
DYD1_k127_4864837_3 Protein conserved in bacteria - - - 0.0000000000007469 76.0
DYD1_k127_4864837_4 Membrane-bound lytic murein transglycosylase - - - 0.0001137 51.0
DYD1_k127_4870357_0 Carbamoyl-phosphate synthase small chain, CPSase domain K01956 - 6.3.5.5 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001662 417.0
DYD1_k127_4870357_1 SMART PDZ DHR GLGF domain protein - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000009601 288.0
DYD1_k127_4870357_2 Histone-like DNA-binding protein which is capable of wrapping DNA to stabilize it, and thus to prevent its denaturation under extreme environmental conditions K05788 - - 0.000000000000000000000000000000000000000000002064 166.0
DYD1_k127_4881905_0 The UvrABC repair system catalyzes the recognition and processing of DNA lesions. UvrA is an ATPase and a DNA-binding protein. A damage recognition complex composed of 2 UvrA and 2 UvrB subunits scans DNA for abnormalities. When the presence of a lesion has been verified by UvrB, the UvrA molecules dissociate K03701 - - 0.0 1150.0
DYD1_k127_4881905_1 malic enzyme K00027,K00029,K00625,K13788 GO:0003674,GO:0003824,GO:0004470,GO:0004473,GO:0005488,GO:0008150,GO:0008152,GO:0016491,GO:0016614,GO:0016615,GO:0016616,GO:0030145,GO:0043167,GO:0043169,GO:0046872,GO:0046914,GO:0055114 1.1.1.38,1.1.1.40,2.3.1.8 4.089e-277 871.0
DYD1_k127_4881905_2 Involved in the gluconeogenesis. Catalyzes the conversion of oxaloacetate (OAA) to phosphoenolpyruvate (PEP) through direct phosphoryl transfer between the nucleoside triphosphate and OAA K01610 - 4.1.1.49 1.533e-236 742.0
DYD1_k127_4881905_3 Metal dependent phosphohydrolases with conserved 'HD' motif. K06885 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005785 451.0
DYD1_k127_4881905_4 Serine/threonine phosphatases, family 2C, catalytic domain K20074 - 3.1.3.16 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000008357 302.0
DYD1_k127_4881905_5 Forkhead associated domain - - - 0.00000000000000000000000007504 123.0
DYD1_k127_4881905_6 Catalyzes the transfer of a lysyl group from L-lysyl- tRNA(Lys) to membrane-bound phosphatidylglycerol (PG), which produces lysylphosphatidylglycerol (LPG), a major component of the bacterial membrane with a positive net charge. LPG synthesis contributes to bacterial virulence as it is involved in the resistance mechanism against cationic antimicrobial peptides (CAMP) produces by the host's immune system (defensins, cathelicidins) and by the competing microorganisms K07027 - - 0.0000000000000000000000000796 120.0
DYD1_k127_4932927_0 cellulase activity - - - 3.408e-216 692.0
DYD1_k127_4932927_1 Lactonase, 7-bladed beta-propeller - - - 0.0000000002598 65.0
DYD1_k127_4946977_0 Di-haem cytochrome c peroxidase K00428 - 1.11.1.5 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001842 425.0
DYD1_k127_4946977_1 Poorly processive, error-prone DNA polymerase involved in untargeted mutagenesis. Copies undamaged DNA at stalled replication forks, which arise in vivo from mismatched or misaligned primer ends. These misaligned primers can be extended by PolIV. Exhibits no 3'-5' exonuclease (proofreading) activity. May be involved in translesional synthesis, in conjunction with the beta clamp from PolIII K02346 - 2.7.7.7 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004783 362.0
DYD1_k127_4946977_2 ABC transporter K01990,K09697 - 3.6.3.7 0.00000000000000000000000000000000000000000000000000000000000000000001139 242.0
DYD1_k127_4946977_3 Ferredoxin - - - 0.00000000000000000000000000000000000000000002929 167.0
DYD1_k127_4946977_4 Uncharacterized protein conserved in bacteria (DUF2179) - - - 0.000000000000000000000000000000000000001761 154.0
DYD1_k127_4946977_5 ABC-type Na efflux pump, permease component K09696 - - 0.0000000000000000006087 100.0
DYD1_k127_4946977_6 LytTr DNA-binding domain K02477 - - 0.0000000004533 64.0
DYD1_k127_4946977_7 cell adhesion involved in biofilm formation - - - 0.00000006579 66.0
DYD1_k127_4965975_0 Methionine biosynthesis protein MetW - - - 0.000000002859 66.0
DYD1_k127_4965975_1 Glycosyl transferase, family 2 K00786 - - 0.0004732 49.0
DYD1_k127_4979216_0 Belongs to the UDP-glucose GDP-mannose dehydrogenase family K02474,K13015 - 1.1.1.136 1.392e-205 649.0
DYD1_k127_4979216_1 Enoyl-(Acyl carrier protein) reductase K00059 - 1.1.1.100 0.00000000000000000000000000000000000000000000001403 179.0
DYD1_k127_4979216_2 inositol 2-dehydrogenase activity - - - 0.0000000000000000000000000000000000000003073 158.0
DYD1_k127_4979216_3 - - - - 0.0000000000000000009811 90.0
DYD1_k127_4979216_4 Ribbon-helix-helix protein, copG family - - - 0.0000000000000001959 81.0
DYD1_k127_4979216_5 Protein of unknown function (DUF433) - - - 0.0000000001528 64.0
DYD1_k127_4979216_6 - - - - 0.00001046 53.0
DYD1_k127_4980153_0 Belongs to the prokaryotic molybdopterin-containing oxidoreductase family K00123,K05299 - 1.17.1.10,1.17.1.9 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002374 507.0
DYD1_k127_4980153_1 PFAM Respiratory-chain NADH dehydrogenase domain 51 kDa subunit K00335 - 1.6.5.3 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001654 370.0
DYD1_k127_4980153_2 Belongs to the prokaryotic molybdopterin-containing oxidoreductase family K00123,K05299,K22341 - 1.17.1.10,1.17.1.11,1.17.1.9 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000001942 301.0
DYD1_k127_4980153_3 Tail Collar domain protein - - - 0.000000000000000000000005965 110.0
DYD1_k127_4980153_4 Belongs to the HAD-like hydrolase superfamily K01101 - 3.1.3.41 0.000000008711 59.0
DYD1_k127_4981403_0 Domain of unknown function (DUF4976) - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001271 564.0
DYD1_k127_4981403_1 Aminotransferase class-V K00812 - 2.6.1.1 0.000000000000000000000000000000000000000000000000000000000000000329 226.0
DYD1_k127_4981403_2 HAD-hyrolase-like K06019 - 3.6.1.1 0.000000000000000000000000000000000000000000000000000002097 199.0
DYD1_k127_4981403_3 Phospholipase/Carboxylesterase - - - 0.0000006956 61.0
DYD1_k127_498741_0 Belongs to the GPAT DAPAT family K00631 - 2.3.1.15 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000007386 308.0
DYD1_k127_498741_1 metal-dependent phosphohydrolase, HD sub domain K03698 - - 0.00000000000000000000000000000000000000000000000000000000000000000001461 246.0
DYD1_k127_498741_10 AraC family transcriptional regulator K18991,K21746 - - 0.0000002311 61.0
DYD1_k127_498741_2 Signal peptidase, peptidase S26 K03100 - 3.4.21.89 0.00000000000000000000000000000000000000000000000000000000000004732 220.0
DYD1_k127_498741_3 Belongs to the peptidase M48B family K03799 - - 0.0000000000000000000000000000000000000000000000000000004556 206.0
DYD1_k127_498741_4 LemA family K03744 - - 0.00000000000000000000000000000000000000000000000003469 185.0
DYD1_k127_498741_5 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). K03406 - - 0.000000000000000000000000000000000000000004897 179.0
DYD1_k127_498741_6 Receptor family ligand binding region K01999 - - 0.00000000000000000000000000000000002507 153.0
DYD1_k127_498741_7 MerR HTH family regulatory protein - - - 0.00000000000000000000000000000000004456 143.0
DYD1_k127_498741_8 transcriptional regulator K03719 - - 0.00000000000000000000009165 103.0
DYD1_k127_498741_9 PFAM ATP-binding region ATPase domain protein - - - 0.000000000000000000002309 99.0
DYD1_k127_4990494_0 cytochrome c oxidase subunit I K02274 - 1.9.3.1 1.045e-260 813.0
DYD1_k127_4990494_1 transporter - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004603 312.0
DYD1_k127_4990494_2 Cytochrome C oxidase subunit II, periplasmic domain K02275 - 1.9.3.1 0.000000000000000000000000000000000000000000000000000000000000000386 223.0
DYD1_k127_4990494_3 Histidine kinase - - - 0.00000000000000000000000000000000000000003852 169.0
DYD1_k127_4990494_4 transporter K07238 - - 0.00000000000000000000000000000000003308 144.0
DYD1_k127_4990494_5 Belongs to the small heat shock protein (HSP20) family K13993 - - 0.0000000000000000000001456 104.0
DYD1_k127_4990494_6 AMP binding - - - 0.00000000001602 76.0
DYD1_k127_4990494_7 PFAM CBS domain containing protein - - - 0.000000001039 66.0
DYD1_k127_5005314_0 Involved in targeting and insertion of nascent membrane proteins into the cytoplasmic membrane. Binds to the hydrophobic signal sequence of the ribosome-nascent chain (RNC) as it emerges from the ribosomes. The SRP-RNC complex is then targeted to the cytoplasmic membrane where it interacts with the SRP receptor FtsY K03106 GO:0005575,GO:0005618,GO:0005623,GO:0005886,GO:0008150,GO:0016020,GO:0030312,GO:0040007,GO:0044464,GO:0071944 3.6.5.4 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001574 355.0
DYD1_k127_5005314_1 Belongs to the dicarboxylate amino acid cation symporter (DAACS) (TC 2.A.23) family - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000003842 285.0
DYD1_k127_5014591_0 NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient K00333 - 1.6.5.3 2.569e-206 650.0
DYD1_k127_5014591_1 Thioredoxin-like [2Fe-2S] ferredoxin K00334 - 1.6.5.3 0.000000000000000000000000000000000000000000000000000000000000000000000000000005963 265.0
DYD1_k127_5014591_2 NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient K00332 - 1.6.5.3 0.0003314 43.0
DYD1_k127_5019915_0 Glycosyl hydrolase 36 superfamily, catalytic domain K13688 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004824 419.0
DYD1_k127_502079_0 The UvrABC repair system catalyzes the recognition and processing of DNA lesions. UvrA is an ATPase and a DNA-binding protein. A damage recognition complex composed of 2 UvrA and 2 UvrB subunits scans DNA for abnormalities. When the presence of a lesion has been verified by UvrB, the UvrA molecules dissociate K03701 - - 0.0 1365.0
DYD1_k127_502079_1 Divalent ion tolerance protein K03926 - - 0.000000000000000000000005015 107.0
DYD1_k127_502079_2 COG0457 FOG TPR repeat - - - 0.000000005825 68.0
DYD1_k127_5022326_0 Domain of unknown function (DUF5118) - - - 6.195e-311 975.0
DYD1_k127_5022326_1 EamA-like transporter family - - - 0.000000000000000000000000000000000000000000000000000000000000000004724 237.0
DYD1_k127_5022326_2 Catalyzes the ferrous insertion into protoporphyrin IX K01772 GO:0003674,GO:0003824,GO:0004325,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006725,GO:0006778,GO:0006779,GO:0006783,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009987,GO:0016829,GO:0018130,GO:0019438,GO:0033013,GO:0033014,GO:0034641,GO:0042168,GO:0042440,GO:0044237,GO:0044249,GO:0044271,GO:0044424,GO:0044464,GO:0046148,GO:0046483,GO:0051186,GO:0051188,GO:0071704,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576 4.99.1.1,4.99.1.9 0.00000000000000000000000000000000000000000000000000000002024 208.0
DYD1_k127_5028051_0 Surface antigen - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001653 418.0
DYD1_k127_5028051_1 Periplasmic binding protein K02016 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000861 266.0
DYD1_k127_5028051_2 Calcineurin-like phosphoesterase - - - 0.00000000000000000000000000000000000000000000000000000002626 214.0
DYD1_k127_5028051_3 Disulphide isomerase - - - 0.00000000000000000000000000000000000000000000000001213 184.0
DYD1_k127_5028051_4 Glycerophosphoryl diester phosphodiesterase family K01126 - 3.1.4.46 0.00000000000000000000000000000000000000000000000002592 192.0
DYD1_k127_5028051_5 Protein of unknown function, DUF488 - - - 0.000000000000000000000000000000000000000000000009919 178.0
DYD1_k127_5028051_6 4Fe-4S binding domain - - - 0.0000000000000000000000000000000000001268 143.0
DYD1_k127_5028051_7 Belongs to the acetyltransferase family. ArgA subfamily K00619 - 2.3.1.1 0.000000000000000000000003548 105.0
DYD1_k127_5028051_8 Domain of unknown function (DUF4956) - - - 0.000000000000000000005182 106.0
DYD1_k127_5075035_0 Protein tyrosine kinase K12132 - 2.7.11.1 2.839e-231 745.0
DYD1_k127_5075035_1 Dehydrogenase K00117 - 1.1.5.2 6.018e-213 683.0
DYD1_k127_5075035_10 Negatively regulates transcription of bacterial ribonucleotide reductase nrd genes and operons by binding to NrdR- boxes K07738 - - 0.0000002726 61.0
DYD1_k127_5075035_11 - - - - 0.0004005 46.0
DYD1_k127_5075035_2 Protein tyrosine kinase K12132 - 2.7.11.1 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004146 439.0
DYD1_k127_5075035_3 OmpA family - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000003899 276.0
DYD1_k127_5075035_4 Sodium/hydrogen exchanger family - - - 0.000000000000000000000000000000000000000000000000000000000000008123 234.0
DYD1_k127_5075035_5 ECF sigma factor - - - 0.000000000000000000000000000000000000000000009177 169.0
DYD1_k127_5075035_6 Fumarylacetoacetate (FAA) hydrolase family - - - 0.000000000000000000000000000000000003514 148.0
DYD1_k127_5075035_7 cytochrome C peroxidase - - - 0.000000000000000000000000002073 116.0
DYD1_k127_5075035_8 HupE / UreJ protein - - - 0.000000000000000001469 94.0
DYD1_k127_5075035_9 Cysteine-rich CPXCG - - - 0.000000000000001743 79.0
DYD1_k127_5098524_0 Type I phosphodiesterase / nucleotide pyrophosphatase K01113 - 3.1.3.1 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002357 433.0
DYD1_k127_5098524_1 Peptidase M56 - - - 0.0000000000000000000000000000000000903 150.0
DYD1_k127_5100402_0 Catalyzes the acyloin condensation reaction between C atoms 2 and 3 of pyruvate and glyceraldehyde 3-phosphate to yield 1-deoxy-D-xylulose-5-phosphate (DXP) K01662 - 2.2.1.7 1.28e-238 754.0
DYD1_k127_5100402_1 Endoribonuclease that initiates mRNA decay K18682 - - 4.304e-195 622.0
DYD1_k127_5100402_10 IF-3 binds to the 30S ribosomal subunit and shifts the equilibrum between 70S ribosomes and their 50S and 30S subunits in favor of the free subunits, thus enhancing the availability of 30S subunits on which protein synthesis initiation begins K02520 - - 0.000000000000000000000000000000000000000000000000000000000000008316 222.0
DYD1_k127_5100402_11 EXOIII K02342 - 2.7.7.7 0.000000000000000000000000000000000000000000000000000000001924 211.0
DYD1_k127_5100402_12 Binds directly to 23S ribosomal RNA and is necessary for the in vitro assembly process of the 50S ribosomal subunit. It is not involved in the protein synthesizing functions of that subunit K02887 - - 0.00000000000000000000000000000000000000000000000002257 181.0
DYD1_k127_5100402_13 Involved in the regulation of the intracellular balance of NAD and NADP, and is a key enzyme in the biosynthesis of NADP. Catalyzes specifically the phosphorylation on 2'-hydroxyl of the adenosine moiety of NAD to yield NADP K00858 - 2.7.1.23 0.000000000000000000000000000000000000000000000008054 177.0
DYD1_k127_5100402_14 Activator of cell division through the inhibition of FtsZ GTPase activity, therefore promoting FtsZ assembly into bundles of protofilaments necessary for the formation of the division Z ring. It is recruited early at mid-cell but it is not essential for cell division K09888 - - 0.0000000000000006732 85.0
DYD1_k127_5100402_15 Belongs to the bacterial ribosomal protein bL35 family K02916 GO:0003674,GO:0003735,GO:0005198,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0015934,GO:0022625,GO:0022626,GO:0032991,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:1990904 - 0.00000000000000197 80.0
DYD1_k127_5100402_16 - - - - 0.0001307 48.0
DYD1_k127_5100402_17 Bidirectionally degrades single-stranded DNA into large acid-insoluble oligonucleotides, which are then degraded further into small acid-soluble oligonucleotides K03602 - 3.1.11.6 0.0005022 52.0
DYD1_k127_5100402_2 B3/4 domain K01890 - 6.1.1.20 1.377e-194 644.0
DYD1_k127_5100402_3 Metallo-beta-lactamase superfamily - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002797 376.0
DYD1_k127_5100402_4 Catalyzes the oxidation of 5,10- methylenetetrahydrofolate to 5,10-methenyltetrahydrofolate and then the hydrolysis of 5,10-methenyltetrahydrofolate to 10- formyltetrahydrofolate K01491 - 1.5.1.5,3.5.4.9 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002737 349.0
DYD1_k127_5100402_5 Bidirectionally degrades single-stranded DNA into large acid-insoluble oligonucleotides, which are then degraded further into small acid-soluble oligonucleotides K03601 - 3.1.11.6 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003327 354.0
DYD1_k127_5100402_6 Belongs to the class-II aminoacyl-tRNA synthetase family. Phe-tRNA synthetase alpha subunit type 1 subfamily K01889 - 6.1.1.20 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005282 338.0
DYD1_k127_5100402_7 Arginine K01478 - 3.5.3.6 0.00000000000000000000000000000000000000000000000000000000000000000000000061 261.0
DYD1_k127_5100402_8 Polyprenyl synthetase K13789 - 2.5.1.1,2.5.1.10,2.5.1.29 0.000000000000000000000000000000000000000000000000000000000000000000000003566 254.0
DYD1_k127_5100402_9 Modulates transcription in response to changes in cellular NADH NAD( ) redox state K01926 - - 0.00000000000000000000000000000000000000000000000000000000000000000000001401 247.0
DYD1_k127_5141700_0 Transglycosylase K05366 - 2.4.1.129,3.4.16.4 3.502e-218 698.0
DYD1_k127_5141700_1 PglZ domain - - - 1.394e-204 648.0
DYD1_k127_5141700_10 transcriptional regulatory protein - GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0044424,GO:0044444,GO:0044464 - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000001643 299.0
DYD1_k127_5141700_11 Catalyzes the rearrangement of 1-deoxy-D-xylulose 5- phosphate (DXP) to produce the thiazole phosphate moiety of thiamine. Sulfur is provided by the thiocarboxylate moiety of the carrier protein ThiS. In vitro, sulfur can be provided by H(2)S K03149 GO:0003674,GO:0003824,GO:0006725,GO:0006766,GO:0006767,GO:0006772,GO:0006790,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009110,GO:0009228,GO:0009987,GO:0017144,GO:0018130,GO:0019438,GO:0034641,GO:0042364,GO:0042723,GO:0042724,GO:0044237,GO:0044249,GO:0044271,GO:0044272,GO:0044281,GO:0044283,GO:0046483,GO:0071704,GO:0072527,GO:0072528,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576 2.8.1.10 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000567 310.0
DYD1_k127_5141700_12 Aminotransferase class-V - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000007242 304.0
DYD1_k127_5141700_13 4Fe-4S single cluster domain K07001 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000003019 282.0
DYD1_k127_5141700_14 Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family K00821 - 2.6.1.11,2.6.1.17 0.000000000000000000000000000000000000000000000000000000000000000000000000000000004456 297.0
DYD1_k127_5141700_15 Catalyzes a mechanistically unusual reaction, the ATP- dependent insertion of CO2 between the N7 and N8 nitrogen atoms of 7,8-diaminopelargonic acid (DAPA) to form an ureido ring K00857,K01920,K01935 GO:0003674,GO:0003824,GO:0004141,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006082,GO:0006732,GO:0006766,GO:0006767,GO:0006768,GO:0006790,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009102,GO:0009108,GO:0009110,GO:0009987,GO:0016053,GO:0016874,GO:0016879,GO:0016882,GO:0017144,GO:0018130,GO:0019752,GO:0032787,GO:0034641,GO:0042364,GO:0043436,GO:0043603,GO:0043604,GO:0044237,GO:0044249,GO:0044271,GO:0044272,GO:0044281,GO:0044283,GO:0044424,GO:0044444,GO:0044464,GO:0046394,GO:0046483,GO:0051186,GO:0051188,GO:0071704,GO:0072330,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576 2.7.1.21,6.3.2.3,6.3.3.3 0.000000000000000000000000000000000000000000000000000000000000000000001504 254.0
DYD1_k127_5141700_16 Amidohydrolase family K12960,K20810 - 3.5.4.28,3.5.4.31,3.5.4.40 0.000000000000000000000000000000000000000000000000000000000000000000002351 251.0
DYD1_k127_5141700_17 Catalyzes the NADPH-dependent reduction of N-acetyl-5- glutamyl phosphate to yield N-acetyl-L-glutamate 5-semialdehyde K00145 - 1.2.1.38 0.0000000000000000000000000000000000000000000000000000000001688 227.0
DYD1_k127_5141700_18 Nuclease that resolves Holliday junction intermediates in genetic recombination. Cleaves the cruciform structure in supercoiled DNA by nicking to strands with the same polarity at sites symmetrically opposed at the junction in the homologous arms and leaves a 5'-terminal phosphate and a 3'-terminal hydroxyl group K01159 - 3.1.22.4 0.000000000000000000000000000000000000000000000000000001084 198.0
DYD1_k127_5141700_19 DnaB-like helicase C terminal domain K02314 - 3.6.4.12 0.0000000000000000000000000000000000000000000000002565 192.0
DYD1_k127_5141700_2 The RuvA-RuvB complex in the presence of ATP renatures cruciform structure in supercoiled DNA with palindromic sequence, indicating that it may promote strand exchange reactions in homologous recombination. RuvAB is a helicase that mediates the Holliday junction migration by localized denaturation and reannealing K03551 - 3.6.4.12 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001102 501.0
DYD1_k127_5141700_20 Removes the formyl group from the N-terminal Met of newly synthesized proteins. Requires at least a dipeptide for an efficient rate of reaction. N-terminal L-methionine is a prerequisite for activity but the enzyme has broad specificity at other positions K01462 - 3.5.1.88 0.0000000000000000000000000000000000000000000008858 171.0
DYD1_k127_5141700_21 Belongs to the acetylglutamate kinase family. ArgB subfamily K00930 GO:0003674,GO:0003824,GO:0003991,GO:0005488,GO:0005575,GO:0005618,GO:0005623,GO:0005886,GO:0006082,GO:0006520,GO:0006525,GO:0006526,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0008652,GO:0009058,GO:0009064,GO:0009084,GO:0009987,GO:0016020,GO:0016053,GO:0016301,GO:0016310,GO:0016597,GO:0016740,GO:0016772,GO:0016774,GO:0019752,GO:0030312,GO:0031406,GO:0034618,GO:0036094,GO:0040007,GO:0043167,GO:0043168,GO:0043169,GO:0043177,GO:0043436,GO:0044237,GO:0044238,GO:0044249,GO:0044281,GO:0044283,GO:0044464,GO:0046394,GO:0071704,GO:0071944,GO:1901564,GO:1901566,GO:1901576,GO:1901605,GO:1901607 2.7.2.8 0.000000000000000000000000000000000000000003844 177.0
DYD1_k127_5141700_22 The RuvA-RuvB complex in the presence of ATP renatures cruciform structure in supercoiled DNA with palindromic sequence, indicating that it may promote strand exchange reactions in homologous recombination. RuvAB is a helicase that mediates the Holliday junction migration by localized denaturation and reannealing. RuvA stimulates, in the presence of DNA, the weak ATPase activity of RuvB K03550 - 3.6.4.12 0.00000000000000000000000000000000000002172 157.0
DYD1_k127_5141700_23 PFAM histidine triad (HIT) protein K02503 - - 0.0000000000000000000000000000003122 132.0
DYD1_k127_5141700_24 Regulates arginine biosynthesis genes K03402 - - 0.00000000000000000000000000000573 124.0
DYD1_k127_5141700_25 Condenses 4-methyl-5-(beta-hydroxyethyl)thiazole monophosphate (THZ-P) and 2-methyl-4-amino-5-hydroxymethyl pyrimidine pyrophosphate (HMP-PP) to form thiamine monophosphate (TMP) K00788 GO:0003674,GO:0003824,GO:0004789,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006725,GO:0006766,GO:0006767,GO:0006772,GO:0006790,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009110,GO:0009228,GO:0009987,GO:0016740,GO:0016765,GO:0017144,GO:0018130,GO:0019438,GO:0034641,GO:0042364,GO:0042723,GO:0042724,GO:0044237,GO:0044249,GO:0044271,GO:0044272,GO:0044281,GO:0044283,GO:0044424,GO:0044464,GO:0046483,GO:0071704,GO:0072527,GO:0072528,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576 2.5.1.3 0.00000000000000000000000004222 112.0
DYD1_k127_5141700_26 Specifically methylates the cytosine at position 967 (m5C967) of 16S rRNA K03500,K11392,K21970 GO:0000154,GO:0001510,GO:0003674,GO:0003824,GO:0005575,GO:0005618,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006139,GO:0006364,GO:0006396,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0008168,GO:0008169,GO:0008173,GO:0008649,GO:0008757,GO:0009383,GO:0009451,GO:0009987,GO:0010467,GO:0016070,GO:0016072,GO:0016434,GO:0016740,GO:0016741,GO:0022613,GO:0030312,GO:0031167,GO:0032259,GO:0034470,GO:0034641,GO:0034660,GO:0042254,GO:0043170,GO:0043412,GO:0043414,GO:0044085,GO:0044237,GO:0044238,GO:0044260,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0070475,GO:0071704,GO:0071840,GO:0071944,GO:0090304,GO:0140098,GO:0140102,GO:1901360 2.1.1.176,2.1.1.178 0.000000000000000000002353 108.0
DYD1_k127_5141700_27 Preprotein translocase subunit K03210 - - 0.0000000000000000001984 91.0
DYD1_k127_5141700_28 thiamine biosynthesis protein ThiS K03154 - - 0.00000000002096 68.0
DYD1_k127_5141700_29 Type II transport protein GspH K08084 - - 0.000008079 55.0
DYD1_k127_5141700_3 Argininosuccinate synthase K01940 GO:0000050,GO:0000053,GO:0003674,GO:0003824,GO:0004055,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006082,GO:0006520,GO:0006525,GO:0006526,GO:0006575,GO:0006807,GO:0008150,GO:0008152,GO:0008652,GO:0009058,GO:0009064,GO:0009084,GO:0009507,GO:0009532,GO:0009536,GO:0009570,GO:0009987,GO:0016053,GO:0016874,GO:0016879,GO:0019627,GO:0019752,GO:0034641,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0043436,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0044283,GO:0044422,GO:0044424,GO:0044434,GO:0044435,GO:0044444,GO:0044446,GO:0044464,GO:0046394,GO:0071704,GO:0071941,GO:0072350,GO:1901564,GO:1901566,GO:1901576,GO:1901605,GO:1901607 6.3.4.5 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003887 475.0
DYD1_k127_5141700_4 Catalyzes the base-exchange of a guanine (G) residue with the queuine precursor 7-aminomethyl-7-deazaguanine (PreQ1) at position 34 (anticodon wobble position) in tRNAs with GU(N) anticodons (tRNA-Asp, -Asn, -His and -Tyr). Catalysis occurs through a double-displacement mechanism. The nucleophile active site attacks the C1' of nucleotide 34 to detach the guanine base from the RNA, forming a covalent enzyme-RNA intermediate. The proton acceptor active site deprotonates the incoming PreQ1, allowing a nucleophilic attack on the C1' of the ribose to form the product. After dissociation, two additional enzymatic reactions on the tRNA convert PreQ1 to queuine (Q), resulting in the hypermodified nucleoside queuosine (7-(((4,5-cis-dihydroxy-2- cyclopenten-1-yl)amino)methyl)-7-deazaguanosine) K00773 - 2.4.2.29 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003264 463.0
DYD1_k127_5141700_5 Argininosuccinate lyase C-terminal K01755 - 4.3.2.1 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004497 446.0
DYD1_k127_5141700_6 Catalyzes the attachment of tyrosine to tRNA(Tyr) in a two-step reaction tyrosine is first activated by ATP to form Tyr- AMP and then transferred to the acceptor end of tRNA(Tyr) K01866 GO:0003674,GO:0003824,GO:0004812,GO:0004831,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006082,GO:0006139,GO:0006399,GO:0006520,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0009987,GO:0016070,GO:0016874,GO:0016875,GO:0019752,GO:0034641,GO:0034660,GO:0043038,GO:0043039,GO:0043170,GO:0043436,GO:0044237,GO:0044238,GO:0044281,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0071704,GO:0090304,GO:0140098,GO:0140101,GO:1901360,GO:1901564 6.1.1.1 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000192 394.0
DYD1_k127_5141700_7 Transfers and isomerizes the ribose moiety from AdoMet to the 7-aminomethyl group of 7-deazaguanine (preQ1-tRNA) to give epoxyqueuosine (oQ-tRNA) K07568 - 2.4.99.17 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004948 362.0
DYD1_k127_5141700_8 Involved in lipid A export and possibly also in glycerophospholipid export and for biogenesis of the outer membrane. Transmembrane domains (TMD) form a pore in the inner membrane and the ATP-binding domain (NBD) is responsible for energy generation K11085 GO:0000166,GO:0003674,GO:0003824,GO:0005215,GO:0005319,GO:0005488,GO:0005515,GO:0005524,GO:0005575,GO:0005623,GO:0005886,GO:0005887,GO:0006810,GO:0006855,GO:0006869,GO:0008144,GO:0008150,GO:0008289,GO:0008559,GO:0009987,GO:0010876,GO:0015221,GO:0015238,GO:0015399,GO:0015405,GO:0015437,GO:0015893,GO:0015920,GO:0016020,GO:0016021,GO:0016043,GO:0016462,GO:0016787,GO:0016817,GO:0016818,GO:0016887,GO:0017076,GO:0017111,GO:0022804,GO:0022857,GO:0022884,GO:0030554,GO:0031224,GO:0031226,GO:0032553,GO:0032555,GO:0032559,GO:0032991,GO:0033036,GO:0034040,GO:0034204,GO:0035639,GO:0036094,GO:0042221,GO:0042493,GO:0042623,GO:0042626,GO:0042802,GO:0042908,GO:0042910,GO:0043167,GO:0043168,GO:0043190,GO:0043492,GO:0044425,GO:0044459,GO:0044464,GO:0050896,GO:0051179,GO:0051234,GO:0055085,GO:0061024,GO:0065007,GO:0065008,GO:0071702,GO:0071840,GO:0071944,GO:0097035,GO:0097159,GO:0097367,GO:0098533,GO:0098796,GO:0098797,GO:1901264,GO:1901265,GO:1901363,GO:1901505,GO:1902494,GO:1902495,GO:1904949,GO:1990351 - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004171 346.0
DYD1_k127_5141700_9 Attaches a formyl group to the free amino group of methionyl-tRNA(fMet). The formyl group appears to play a dual role in the initiator identity of N-formylmethionyl-tRNA by promoting its recognition by IF2 and preventing the misappropriation of this tRNA by the elongation apparatus K00604 - 2.1.2.9 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000002167 318.0
DYD1_k127_5150706_0 Evidence 3 Function proposed based on presence of conserved amino acid motif, structural feature or limited homology K00371,K16965,K17048,K17051 GO:0005575,GO:0005623,GO:0042597,GO:0044464 1.7.5.1 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008213 576.0
DYD1_k127_5150706_1 Molybdopterin oxidoreductase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000001353 243.0
DYD1_k127_5154240_0 Catalyzes the synthesis of 5,6-dihydrouridine (D), a modified base found in the D-loop of most tRNAs, via the reduction of the C5-C6 double bond in target uridines - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006291 421.0
DYD1_k127_5154240_1 AIR carboxylase K06898 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000762 253.0
DYD1_k127_5154240_2 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 K02806 - - 0.00000000000000000000000000000000000006387 148.0
DYD1_k127_5154240_3 diguanylate cyclase - - - 0.000000000000000000000000000002088 140.0
DYD1_k127_5177942_0 Glycosyltransferase Family 4 - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005072 469.0
DYD1_k127_5177942_1 Sulfotransferase family - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000002923 302.0
DYD1_k127_5177942_2 Sulfotransferase domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000001958 289.0
DYD1_k127_5177942_3 COG2148 Sugar transferases involved in lipopolysaccharide synthesis - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000001006 290.0
DYD1_k127_5177942_4 Glycosyl transferases group 1 - - - 0.0000000000000000000000000000000000000000000000000000000000009326 228.0
DYD1_k127_5177942_5 Modulates the polysaccharide chain length of enterobacterial common antigen (ECA) - - - 0.000000000000000000000000000000000000000000001275 180.0
DYD1_k127_5177942_6 Polysaccharide biosynthesis C-terminal domain - - - 0.0000000000000000000000000000002425 141.0
DYD1_k127_5177942_7 glycosyl transferase family 2 K07011 - - 0.0000000000000000000000001306 118.0
DYD1_k127_5177942_8 Pfam O-Antigen Polymerase - - - 0.00000000000003681 85.0
DYD1_k127_5185541_0 Carboxypeptidase regulatory-like domain - - - 7.311e-286 912.0
DYD1_k127_5185541_1 Fatty acid desaturase K00507 - 1.14.19.1 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001204 326.0
DYD1_k127_5185541_10 - - - - 0.0001253 54.0
DYD1_k127_5185541_11 Domain of unknown function (DUF4382) - - - 0.0003153 51.0
DYD1_k127_5185541_12 Protein of unknown function DUF72 - - - 0.0009976 49.0
DYD1_k127_5185541_2 CAAX protease self-immunity K07052 - - 0.0000000000000000000000000000000000000000000000009484 192.0
DYD1_k127_5185541_3 membrane - - - 0.000000000000000000000000000000000000003002 156.0
DYD1_k127_5185541_4 - - - - 0.0000000000000000000000000000000000001627 149.0
DYD1_k127_5185541_5 DNA-templated transcription, initiation K03088 - - 0.0000000000000000000000000000000003852 139.0
DYD1_k127_5185541_6 PFAM glycoside hydrolase family 13 domain protein - - - 0.0000000000000000000001286 106.0
DYD1_k127_5185541_7 Carboxypeptidase regulatory-like domain K02014 - - 0.000000000000000003507 95.0
DYD1_k127_5185541_8 - - - - 0.00000007311 64.0
DYD1_k127_5185541_9 ABC-2 family transporter protein K01992 - - 0.000007976 48.0
DYD1_k127_5196903_0 X-Pro dipeptidyl-peptidase C-terminal non-catalytic domain K06978 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005116 556.0
DYD1_k127_5196903_1 TonB dependent receptor - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009704 454.0
DYD1_k127_5196903_10 4fe-4S ferredoxin, iron-sulfur binding domain protein - - - 0.00000000000000000000000000000000000000000000000000002894 198.0
DYD1_k127_5196903_11 - - - - 0.000000000000000000000000000000000000000000000873 173.0
DYD1_k127_5196903_12 SusD family K21572 - - 0.00000000000000000000000000000000000006734 158.0
DYD1_k127_5196903_13 Bacterial regulatory proteins, tetR family K16137 - - 0.000000000000000000000000000000000001706 147.0
DYD1_k127_5196903_14 Arginase family - - - 0.0000000000000002735 87.0
DYD1_k127_5196903_15 hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in linear amidines K01476,K01480 - 3.5.3.1,3.5.3.11 0.00003056 54.0
DYD1_k127_5196903_16 PFAM regulatory protein, ArsR - - - 0.00003714 49.0
DYD1_k127_5196903_2 Transketolase, pyrimidine binding domain K00167 - 1.2.4.4 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002123 414.0
DYD1_k127_5196903_3 Beta-lactamase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001953 378.0
DYD1_k127_5196903_4 Dehydrogenase E1 component K00161,K00166,K11381,K21416 - 1.2.4.1,1.2.4.4 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003137 360.0
DYD1_k127_5196903_5 Metallo-beta-lactamase superfamily - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000004097 275.0
DYD1_k127_5196903_6 flavodoxin nitric oxide synthase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000006008 280.0
DYD1_k127_5196903_7 Trehalose utilisation K08738,K09992 - - 0.00000000000000000000000000000000000000000000000000000000000000000000007809 259.0
DYD1_k127_5196903_8 Sigma-70 region 2 K03088 - - 0.0000000000000000000000000000000000000000000000000000000000000003418 229.0
DYD1_k127_5196903_9 transcriptional regulator - - - 0.0000000000000000000000000000000000000000000000000000000002553 211.0
DYD1_k127_5203887_0 Fumarase C C-terminus K01744 - 4.3.1.1 2.52e-197 627.0
DYD1_k127_5203887_1 thiosulfate sulfurtransferase activity K01011 GO:0005575,GO:0005618,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005886,GO:0016020,GO:0030312,GO:0044424,GO:0044444,GO:0044464,GO:0071944 2.8.1.1,2.8.1.2 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000124 363.0
DYD1_k127_5203887_2 Metallo-beta-lactamase superfamily - - - 0.0000000000000000000000000000000000000000000000000000000001807 213.0
DYD1_k127_5203887_3 Transcriptional regulator - - - 0.0000000000000000000000000000000000000000000000000008748 189.0
DYD1_k127_5203887_4 Pyridoxal-phosphate dependent enzyme K12339 - 2.5.1.47 0.00000000000000000000000000001121 128.0
DYD1_k127_5203887_5 Belongs to the class-II pyridine nucleotide-disulfide oxidoreductase family K00384 - 1.8.1.9 0.00000000000000000009906 93.0
DYD1_k127_5203887_6 Antioxidant protein with alkyl hydroperoxidase activity. Required for the reduction of the AhpC active site cysteine residues and for the regeneration of the AhpC enzyme activity - - - 0.0000000000000001515 91.0
DYD1_k127_5203887_7 peptidase U32 - - - 0.0000000000000464 78.0
DYD1_k127_5203887_8 Antioxidant protein with alkyl hydroperoxidase activity. Required for the reduction of the AhpC active site cysteine residues and for the regeneration of the AhpC enzyme activity - - - 0.0000000000002522 73.0
DYD1_k127_5213482_0 - - - - 0.0000000000000002327 92.0
DYD1_k127_5225352_0 Multicopper oxidase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002838 339.0
DYD1_k127_5225352_1 Cytochrome D1 heme domain - - - 0.000000003839 64.0
DYD1_k127_5247379_0 Glycosyl transferase family 21 K00786 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008221 551.0
DYD1_k127_5247379_1 Sodium/hydrogen exchanger family K03455,K11747 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001009 506.0
DYD1_k127_5247379_10 PFAM Membrane protein of K08972 - - 0.0000000000000000000000007529 108.0
DYD1_k127_5247379_2 ATP binding to DnaK triggers the release of the substrate protein, thus completing the reaction cycle. Several rounds of ATP-dependent interactions between DnaJ, DnaK and GrpE are required for fully efficient folding. Also involved, together with DnaK and GrpE, in the DNA replication of plasmids through activation of initiation proteins K03686 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001333 403.0
DYD1_k127_5247379_3 Catalyzes the oxidation of either pyridoxine 5'- phosphate (PNP) or pyridoxamine 5'-phosphate (PMP) into pyridoxal 5'-phosphate (PLP) K00275 - 1.4.3.5 0.0000000000000000000000000000000000000000000000000000000000000000000001248 248.0
DYD1_k127_5247379_4 PFAM Response regulator receiver domain K07668 - - 0.00000000000000000000000000000000000000000000000000000000000001857 235.0
DYD1_k127_5247379_5 Competence-damaged protein K03742 - 3.5.1.42 0.000000000000000000000000000000000000003969 152.0
DYD1_k127_5247379_6 Uncharacterised protein family UPF0047 - - - 0.00000000000000000000000000000000000000403 150.0
DYD1_k127_5247379_7 HEAT repeats - - - 0.00000000000000000000000000000000000005444 160.0
DYD1_k127_5247379_8 'ABC-type proline glycine betaine transport K05847 - - 0.0000000000000000000000000000000002413 137.0
DYD1_k127_5247379_9 Participates actively in the response to hyperosmotic and heat shock by preventing the aggregation of stress-denatured proteins, in association with DnaK and GrpE. It is the nucleotide exchange factor for DnaK and may function as a thermosensor. Unfolded proteins bind initially to DnaJ K03687 - - 0.0000000000000000000000000000007239 130.0
DYD1_k127_5249372_0 Catalyzes the condensation of the acetyl group of acetyl-CoA with 3-methyl-2-oxobutanoate (2-oxoisovalerate) to form 3-carboxy-3-hydroxy-4-methylpentanoate (2-isopropylmalate) K01649 - 2.3.3.13 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008223 439.0
DYD1_k127_5249372_1 Nucleotidyl transferase K00973 - 2.7.7.24 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006025 393.0
DYD1_k127_5249372_2 Bacterial protein of unknown function (DUF885) - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000004464 320.0
DYD1_k127_5249372_3 Arsenical pump-driving ATPase K01551 - 3.6.3.16 0.00000000000000000000000000000000000000000000000000000000000000000000000000000003741 280.0
DYD1_k127_5249372_4 Mannose-6-phosphate isomerase - - - 0.000000000000000000000000000000000000000008516 158.0
DYD1_k127_5249372_5 Carboxypeptidase regulatory-like domain - - - 0.00000000000000000000000000000000000000009737 162.0
DYD1_k127_5249372_6 4Fe-4S dicluster domain K02573 - - 0.00000000000000000000000000000008121 129.0
DYD1_k127_5249372_7 - - - - 0.000000000000000001202 100.0
DYD1_k127_5258155_0 ADP-ribosylation factor family K06883 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000269 377.0
DYD1_k127_5258155_1 May play a role in DNA repair. It seems to be involved in an RecBC-independent recombinational process of DNA repair. It may act with RecF and RecO K06187 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000008793 256.0
DYD1_k127_5258155_2 Roadblock/LC7 domain - - - 0.00000000000000000000000000000000000000000000000000000000002201 209.0
DYD1_k127_5258155_3 Competence-damaged protein K03742 - 3.5.1.42 0.0000000000000000000000000000000000000000000000003217 197.0
DYD1_k127_5258155_4 CDP-alcohol phosphatidyltransferase K00995 - 2.7.8.5 0.0000000000000000000000000000000000000000000003984 174.0
DYD1_k127_5258155_5 Binds to DNA and alters its conformation. May be involved in regulation of gene expression, nucleoid organization and DNA protection K09747 - - 0.00000000000000001918 85.0
DYD1_k127_5258155_6 DNA polymerase III is a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria. This DNA polymerase also exhibits 3' to 5' exonuclease activity K02343 - 2.7.7.7 0.0000792 51.0
DYD1_k127_5261318_0 Zn peptidase - - - 0.00000000000000000000000000000000000000000000000000000000000000000004933 246.0
DYD1_k127_5261318_1 - - - - 0.0000000000000000000000000000000000000000002232 177.0
DYD1_k127_5261318_2 Putative adhesin - - - 0.00000000000000000000000000000000004425 144.0
DYD1_k127_5261318_3 Sodium:dicarboxylate symporter family K03309 - - 0.000000000000000000000000000002429 126.0
DYD1_k127_5261318_4 Protein of unknown function (DUF445) - - - 0.00000000000007096 85.0
DYD1_k127_5270114_0 Molybdopterin oxidoreductase Fe4S4 domain K00123 - 1.17.1.9 0.00000000000000000002786 91.0
DYD1_k127_5270114_1 Ribbon-helix-helix protein, copG family - - - 0.00000005215 58.0
DYD1_k127_5271748_0 Prolyl oligopeptidase family K01303 - 3.4.19.1 3.671e-273 859.0
DYD1_k127_5271748_1 lysine biosynthetic process via aminoadipic acid - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003182 522.0
DYD1_k127_5271748_10 Domain amino terminal to FKBP-type peptidyl-prolyl isomerase K01802,K03772,K03773 - 5.2.1.8 0.0000000000000000000000000000000000000000000000000001146 194.0
DYD1_k127_5271748_11 - - - - 0.000000000000000000000000000000000000000002967 165.0
DYD1_k127_5271748_12 peptidyl-tyrosine sulfation - - - 0.00000000000000000000000000000002448 134.0
DYD1_k127_5271748_13 PAS fold - - - 0.0000000000000000000000000000001469 140.0
DYD1_k127_5271748_14 6-O-methylguanine DNA methyltransferase, DNA binding domain K07443 - - 0.000000000000000000000000000001802 128.0
DYD1_k127_5271748_15 OsmC-like protein - - - 0.000000000000000000000000001058 119.0
DYD1_k127_5271748_16 Fibrillarin - - - 0.000000000000000000000000001177 130.0
DYD1_k127_5271748_17 Protein of unknown function (DUF2911) - - - 0.000000000000000000000004108 119.0
DYD1_k127_5271748_18 helix_turn_helix gluconate operon transcriptional repressor K07979 - - 0.00000000000000000000000935 107.0
DYD1_k127_5271748_19 undecaprenyldiphospho-muramoylpentapeptide beta-N-acetylglucosaminyltransferase activity K03429 - 2.4.1.315 0.000000000000000000004393 96.0
DYD1_k127_5271748_2 sulfurtransferase K01011 - 2.8.1.1,2.8.1.2 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001513 395.0
DYD1_k127_5271748_20 Phospholipid methyltransferase - - - 0.00000000001909 74.0
DYD1_k127_5271748_21 SnoaL-like domain - - - 0.000449 46.0
DYD1_k127_5271748_3 PFAM Transglycosylase SLT domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005381 404.0
DYD1_k127_5271748_4 - - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001636 329.0
DYD1_k127_5271748_5 prohibitin homologues - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000005594 299.0
DYD1_k127_5271748_6 phosphorelay signal transduction system - - - 0.00000000000000000000000000000000000000000000000000000000000000000000004557 250.0
DYD1_k127_5271748_7 Amino acid permease K03294 - - 0.00000000000000000000000000000000000000000000000000000000000000000000004786 263.0
DYD1_k127_5271748_8 efflux transmembrane transporter activity - - - 0.000000000000000000000000000000000000000000000000000000002559 209.0
DYD1_k127_5271748_9 His Kinase A (phosphoacceptor) domain - - - 0.000000000000000000000000000000000000000000000000000000005703 219.0
DYD1_k127_5275451_0 Protein conserved in bacteria - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004575 474.0
DYD1_k127_5275451_1 Endonuclease/Exonuclease/phosphatase family - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000138 265.0
DYD1_k127_5294392_0 RmlD substrate binding domain K08679 - 5.1.3.6 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001969 342.0
DYD1_k127_5294392_1 - - - - 0.000000000000000001559 88.0
DYD1_k127_5296035_0 protein kinase activity K12132 - 2.7.11.1 0.000000000000000000000000000000000000000000000000000000000000000000000009218 261.0
DYD1_k127_5296035_1 - - - - 0.00000000000000000000000006828 114.0
DYD1_k127_5324309_0 Beta-lactamase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001134 370.0
DYD1_k127_5324309_1 Putative serine dehydratase domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000001741 248.0
DYD1_k127_5324309_2 SnoaL-like polyketide cyclase K15945 - - 0.0000000000000000000000000000000000000000000001656 172.0
DYD1_k127_5324309_3 ATP-grasp protein-like protein - - - 0.00000001089 67.0
DYD1_k127_5325107_0 Catalyzes the decarboxylation of four acetate groups of uroporphyrinogen-III to yield coproporphyrinogen-III K01599 - 4.1.1.37 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002255 430.0
DYD1_k127_5325107_1 Catalyzes the conversion of uracil and 5-phospho-alpha- D-ribose 1-diphosphate (PRPP) to UMP and diphosphate K00761 - 2.4.2.9 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006645 326.0
DYD1_k127_5325107_2 peroxidase activity - - - 0.0000000000000000000000000000000000000000000000000000000000000000000296 244.0
DYD1_k127_5325107_3 Tetrapyrrole (Corrin/Porphyrin) Methylases K01719,K01749,K02303,K13542,K13543 GO:0003674,GO:0003824,GO:0004851,GO:0006725,GO:0006778,GO:0006779,GO:0006783,GO:0006807,GO:0008150,GO:0008152,GO:0008168,GO:0008169,GO:0008757,GO:0009058,GO:0009987,GO:0016740,GO:0016741,GO:0018130,GO:0019354,GO:0019438,GO:0032259,GO:0033013,GO:0033014,GO:0034641,GO:0042168,GO:0042440,GO:0044237,GO:0044249,GO:0044271,GO:0046148,GO:0046156,GO:0046483,GO:0051186,GO:0051188,GO:0071704,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576 2.1.1.107,2.5.1.61,4.2.1.75 0.00000000000000000000000000000000000000000000000000002588 202.0
DYD1_k127_5325107_4 NUDIX domain K01515 - 3.6.1.13 0.0000000000000000000004226 100.0
DYD1_k127_5325107_5 - - - - 0.000000000000004499 87.0
DYD1_k127_5325107_6 - - - - 0.0007219 46.0
DYD1_k127_5342775_0 Belongs to the PEP-utilizing enzyme family K01006 - 2.7.9.1 0.0 1064.0
DYD1_k127_5342775_1 Part of the phosphoribosylformylglycinamidine synthase complex involved in the purines biosynthetic pathway. Catalyzes the ATP-dependent conversion of formylglycinamide ribonucleotide (FGAR) and glutamine to yield formylglycinamidine ribonucleotide (FGAM) and glutamate. The FGAM synthase complex is composed of three subunits. PurQ produces an ammonia molecule by converting glutamine to glutamate. PurL transfers the ammonia molecule to FGAR to form FGAM in an ATP-dependent manner. PurS interacts with PurQ and PurL and is thought to assist in the transfer of the ammonia molecule from PurQ to PurL K01952 - 6.3.5.3 8.66e-282 888.0
DYD1_k127_5342775_2 Catalyzes the formation of phosphoribosylamine from phosphoribosylpyrophosphate (PRPP) and glutamine K00764 - 2.4.2.14 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002093 549.0
DYD1_k127_5342775_3 COG0454 Histone acetyltransferase HPA2 and related - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001007 357.0
DYD1_k127_5342775_4 Beta-lactamase K21469 - 3.4.16.4 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009494 335.0
DYD1_k127_5342775_5 COG0454 Histone acetyltransferase HPA2 and related - - - 0.00000000000000000000000000000000000000000000000000000007808 205.0
DYD1_k127_5342775_6 Peptidase C14 caspase catalytic subunit p20 - - - 0.000000000000000000814 91.0
DYD1_k127_5342775_7 Gram-negative bacterial TonB protein C-terminal - - - 0.000000000000000008314 94.0
DYD1_k127_5342775_8 Transcription factor zinc-finger K09981 - - 0.000000000001281 69.0
DYD1_k127_5375951_0 Prolyl oligopeptidase, N-terminal beta-propeller domain K01322 - 3.4.21.26 3.839e-302 944.0
DYD1_k127_5375951_1 Exonuclease of the beta-lactamase fold involved in RNA processing K07576 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005181 555.0
DYD1_k127_5400693_0 amine dehydrogenase activity K17285 - - 1.017e-249 777.0
DYD1_k127_5400693_1 efflux transmembrane transporter activity - - - 5.262e-227 731.0
DYD1_k127_5400693_10 ECF sigma factor - - - 0.00000000000000000000000000000000000000000000000004273 186.0
DYD1_k127_5400693_11 PFAM Tetratricopeptide TPR_4 - - - 0.0000000000000000000000000000000004529 143.0
DYD1_k127_5400693_12 phosphorelay signal transduction system - - - 0.000000000000000000000000597 110.0
DYD1_k127_5400693_13 PFAM GGDEF domain containing protein - - - 0.000000000000000000002617 107.0
DYD1_k127_5400693_2 COG0457 FOG TPR repeat - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001902 542.0
DYD1_k127_5400693_3 Protein tyrosine kinase K12132 - 2.7.11.1 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004835 561.0
DYD1_k127_5400693_4 - - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001295 370.0
DYD1_k127_5400693_5 protein kinase activity K12132 - 2.7.11.1 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000002776 308.0
DYD1_k127_5400693_6 Histidine kinase - - - 0.000000000000000000000000000000000000000000000000000000000000001165 232.0
DYD1_k127_5400693_7 ECF sigma factor - - - 0.0000000000000000000000000000000000000000000000000000001024 200.0
DYD1_k127_5400693_8 LytTr DNA-binding domain K02477 - - 0.000000000000000000000000000000000000000000000000000001703 206.0
DYD1_k127_5400693_9 - - - - 0.000000000000000000000000000000000000000000000000000193 199.0
DYD1_k127_5423446_0 Catalyzes the conversion of 7,8-dihydroneopterin to 6- hydroxymethyl-7,8-dihydropterin K00950,K13940 - 2.7.6.3,4.1.2.25 0.000000000000000000000000000000000000001238 153.0
DYD1_k127_5423446_1 - - - - 0.00000000000000004598 95.0
DYD1_k127_5423446_2 Belongs to the peptidase S8 family K06113,K12685 - 3.2.1.99 0.00000000000003601 88.0
DYD1_k127_5423446_3 long-chain fatty acid transporting porin activity - - - 0.00000003599 65.0
DYD1_k127_5423718_0 Putative glucoamylase K13688 - - 0.0 1133.0
DYD1_k127_5423718_1 Belongs to the RtcB family K14415 - 6.5.1.3 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008701 514.0
DYD1_k127_5423718_2 Domain of unknown function DUF21 K03699 - - 0.0000000000000000000000000000000000000000000000000000000000001644 220.0
DYD1_k127_5423718_3 Domain of unknown function (DUF4136) - - - 0.0000000000000000002572 96.0
DYD1_k127_5423718_4 Archease protein family (MTH1598/TM1083) - - - 0.0000000000000000002618 93.0
DYD1_k127_5423718_5 Dodecin K09165 - - 0.000000000000003135 78.0
DYD1_k127_5424140_0 ATPase family associated with various cellular activities (AAA) K03924 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001191 424.0
DYD1_k127_5424140_1 Protein kinase domain K12132 - 2.7.11.1 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008956 447.0
DYD1_k127_5424140_10 it plays a direct role in the translocation of protons across the membrane K02108 - - 0.00000000000000000000000000000000000000000000000000000000000005469 229.0
DYD1_k127_5424140_11 - K06992 - - 0.000000000000000000000000000000000000000000000000000000178 203.0
DYD1_k127_5424140_12 Peptidoglycan polymerase that catalyzes glycan chain elongation from lipid-linked precursors K03814 - 2.4.1.129 0.0000000000000000000000000000000000000000000000000001363 199.0
DYD1_k127_5424140_13 - - - - 0.0000000000000000000000000000000000000000000006105 184.0
DYD1_k127_5424140_14 Two component signalling adaptor domain K03408 - - 0.00000000000000000000000000000000000000002813 162.0
DYD1_k127_5424140_15 N-formylglutamate amidohydrolase - - - 0.000000000000000000000000000000000000007047 156.0
DYD1_k127_5424140_16 phosphate ion binding - - - 0.00000000000000000000000000000000001441 141.0
DYD1_k127_5424140_17 CheD chemotactic sensory transduction - - - 0.00000000000000000000000000000008649 132.0
DYD1_k127_5424140_18 Sodium:neurotransmitter symporter family - - - 0.0000000000000000000000003532 109.0
DYD1_k127_5424140_19 function for this protein is to guide the assembly of the membrane sector of the ATPase enzyme complex K02116 - - 0.0001601 48.0
DYD1_k127_5424140_2 Sodium:dicarboxylate symporter family K03309 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001075 401.0
DYD1_k127_5424140_3 Chemotaxis protein histidine kinase and related kinases K03407 - 2.7.13.3 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003344 389.0
DYD1_k127_5424140_4 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001459 359.0
DYD1_k127_5424140_5 Glutathione synthase ribosomal protein S6 modification enzyme (Glutaminyl transferase) - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008429 328.0
DYD1_k127_5424140_6 Methylation of the membrane-bound methyl-accepting chemotaxis proteins (MCP) to form gamma-glutamyl methyl ester residues in MCP K00575 - 2.1.1.80 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002297 310.0
DYD1_k127_5424140_7 Four helix bundle sensory module for signal transduction K03406 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000004646 317.0
DYD1_k127_5424140_8 cheY-homologous receiver domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000008203 243.0
DYD1_k127_5424140_9 glutamate-cysteine ligase activity K01919,K06048 - 6.3.2.2 0.00000000000000000000000000000000000000000000000000000000000000000003713 262.0
DYD1_k127_5442737_0 Phosphoglucose isomerase K00616,K13810 - 2.2.1.2,5.3.1.9 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008756 509.0
DYD1_k127_5442737_1 lysine biosynthetic process via aminoadipic acid - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005846 493.0
DYD1_k127_5442737_11 Protein of unknown function (DUF98) K03181 - 4.1.3.40 0.00000000000000000000000339 113.0
DYD1_k127_5442737_12 - - - - 0.000000000000009422 78.0
DYD1_k127_5442737_2 AMP-binding enzyme K01912 - 6.2.1.30 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002203 476.0
DYD1_k127_5442737_3 AMP-binding enzyme K01912 - 6.2.1.30 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006919 427.0
DYD1_k127_5442737_4 PFAM DAHP synthetase I K03856,K04516 - 2.5.1.54,5.4.99.5 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005386 400.0
DYD1_k127_5442737_5 phosphorelay signal transduction system - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000007924 273.0
DYD1_k127_5442737_6 PFAM Haloacid dehalogenase domain protein hydrolase K01560,K07025 - 3.8.1.2 0.00000000000000000000000000000000000000000000000000000000000000000000000001721 261.0
DYD1_k127_5442737_7 His Kinase A (phosphoacceptor) domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000008731 274.0
DYD1_k127_5442737_8 thiolester hydrolase activity - - - 0.000000000000000000000000000000000000000000000000000000000000002948 227.0
DYD1_k127_5442737_9 Ferritin-like domain K02217 - 1.16.3.2 0.000000000000000000000000000000000000000000001464 170.0
DYD1_k127_5520645_0 FtsX-like permease family K02004 - - 4.054e-199 651.0
DYD1_k127_5520645_1 Pyrimidine nucleoside phosphorylase C-terminal domain K00756 - 2.4.2.2 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004306 569.0
DYD1_k127_5520645_10 Tetratricopeptide repeat - - - 0.000000000000000000000000000000000000000000000000297 182.0
DYD1_k127_5520645_11 Phosphoribosyl transferase domain K07101 - - 0.0000000000000000000000000000000000000000000000201 179.0
DYD1_k127_5520645_12 Binds to Cpn60 in the presence of Mg-ATP and suppresses the ATPase activity of the latter - - - 0.0000000000000000000000000000000000000001929 158.0
DYD1_k127_5520645_13 sensor histidine kinase response - - - 0.0000000000000000000001386 108.0
DYD1_k127_5520645_14 4-vinyl reductase, 4VR - - - 0.000000000000002355 83.0
DYD1_k127_5520645_15 - - - - 0.00003807 55.0
DYD1_k127_5520645_16 Bacterial Ig-like domain 2 - - - 0.0002927 53.0
DYD1_k127_5520645_2 COGs COG1022 Long-chain acyl-CoA synthetase (AMP-forming) K01897 - 6.2.1.3 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007178 554.0
DYD1_k127_5520645_3 Acetyltransferase (GNAT) family - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006137 347.0
DYD1_k127_5520645_4 Putative cyclase K07130 GO:0003674,GO:0003824,GO:0004061,GO:0006082,GO:0006520,GO:0006568,GO:0006569,GO:0006576,GO:0006586,GO:0006725,GO:0006766,GO:0006767,GO:0006807,GO:0008150,GO:0008152,GO:0009056,GO:0009063,GO:0009072,GO:0009074,GO:0009308,GO:0009310,GO:0009987,GO:0016054,GO:0016787,GO:0016810,GO:0016811,GO:0019439,GO:0019441,GO:0019752,GO:0032787,GO:0034641,GO:0042180,GO:0042402,GO:0042430,GO:0042436,GO:0042537,GO:0043420,GO:0043436,GO:0044106,GO:0044237,GO:0044238,GO:0044248,GO:0044270,GO:0044281,GO:0044282,GO:0046218,GO:0046395,GO:0046483,GO:0046700,GO:0070189,GO:0071704,GO:1901360,GO:1901361,GO:1901564,GO:1901565,GO:1901575,GO:1901605,GO:1901606 3.5.1.9 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003463 316.0
DYD1_k127_5520645_5 GTP cyclohydrolase I K00950,K01495 GO:0000166,GO:0001882,GO:0001883,GO:0003674,GO:0003824,GO:0003933,GO:0003934,GO:0005488,GO:0005525,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006066,GO:0006082,GO:0006139,GO:0006575,GO:0006725,GO:0006729,GO:0006732,GO:0006760,GO:0006807,GO:0008150,GO:0008152,GO:0008270,GO:0008616,GO:0009058,GO:0009108,GO:0009116,GO:0009119,GO:0009163,GO:0009987,GO:0016787,GO:0016810,GO:0016814,GO:0017076,GO:0017144,GO:0018130,GO:0019001,GO:0019238,GO:0019438,GO:0019751,GO:0019752,GO:0032549,GO:0032550,GO:0032553,GO:0032555,GO:0032561,GO:0034311,GO:0034312,GO:0034404,GO:0034641,GO:0034654,GO:0035639,GO:0036094,GO:0040007,GO:0042455,GO:0042558,GO:0042559,GO:0043167,GO:0043168,GO:0043169,GO:0043436,GO:0043603,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0044283,GO:0044424,GO:0044444,GO:0044464,GO:0046116,GO:0046146,GO:0046165,GO:0046173,GO:0046483,GO:0046872,GO:0046914,GO:0051186,GO:0051188,GO:0055086,GO:0071704,GO:0097159,GO:0097367,GO:1901135,GO:1901137,GO:1901265,GO:1901360,GO:1901362,GO:1901363,GO:1901564,GO:1901566,GO:1901576,GO:1901615,GO:1901617,GO:1901657,GO:1901659 2.7.6.3,3.5.4.16 0.0000000000000000000000000000000000000000000000000000000000000000000000000000004507 269.0
DYD1_k127_5520645_6 ABC transporter K02003 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000001156 260.0
DYD1_k127_5520645_7 GDSL-like Lipase/Acylhydrolase family K10804 - 3.1.1.5 0.000000000000000000000000000000000000000000000000000000000000000000001041 243.0
DYD1_k127_5520645_8 AAA domain K03546 - - 0.0000000000000000000000000000000000000000000000000000000000000000009629 233.0
DYD1_k127_5520645_9 KR domain - - - 0.000000000000000000000000000000000000000000000000002264 198.0
DYD1_k127_5547831_0 Major Facilitator Superfamily - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004569 556.0
DYD1_k127_5547831_1 helix_turn_helix, Arsenical Resistance Operon Repressor - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002564 445.0
DYD1_k127_5547831_10 helix_turn_helix, Arsenical Resistance Operon Repressor - - - 0.00000000000000000000000000000000000000000003291 162.0
DYD1_k127_5547831_11 metal-dependent membrane protease - - - 0.0000000000000000000000000000000004075 145.0
DYD1_k127_5547831_12 Antibiotic biosynthesis monooxygenase - - - 0.00000000000000000000000004675 110.0
DYD1_k127_5547831_14 RelE-like toxin of type II toxin-antitoxin system HigB K07334 - - 0.0009201 45.0
DYD1_k127_5547831_2 Peptidase family S41 - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001141 387.0
DYD1_k127_5547831_3 COG0823 Periplasmic component of the Tol biopolymer transport system - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001143 366.0
DYD1_k127_5547831_4 ROK family K00845 - 2.7.1.2 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000595 334.0
DYD1_k127_5547831_5 GDSL-like Lipase/Acylhydrolase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000002307 298.0
DYD1_k127_5547831_6 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily - - - 0.000000000000000000000000000000000000000000000000000000000000003133 219.0
DYD1_k127_5547831_7 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily - - - 0.0000000000000000000000000000000000000000000000000000000000005376 213.0
DYD1_k127_5547831_8 Activator of Hsp90 ATPase homolog 1-like protein - - - 0.0000000000000000000000000000000000000000000000000000000002024 208.0
DYD1_k127_5547831_9 PFAM Alpha beta hydrolase fold-1 - - - 0.00000000000000000000000000000000000000000000000007138 190.0
DYD1_k127_5565992_0 Peptidase family M28 - - - 2.398e-217 698.0
DYD1_k127_5565992_1 Glycosyltransferase family 20 K01087,K16055 GO:0003674,GO:0003824,GO:0004805,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005975,GO:0005984,GO:0005991,GO:0005992,GO:0006793,GO:0006796,GO:0006950,GO:0008150,GO:0008152,GO:0009058,GO:0009311,GO:0009312,GO:0009987,GO:0016051,GO:0016311,GO:0016787,GO:0016788,GO:0016791,GO:0019203,GO:0033554,GO:0034637,GO:0042578,GO:0044237,GO:0044238,GO:0044249,GO:0044262,GO:0044424,GO:0044464,GO:0046351,GO:0050896,GO:0051716,GO:0070413,GO:0071704,GO:1901576 2.4.1.15,3.1.3.12 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001945 470.0
DYD1_k127_5565992_2 Major facilitator Superfamily - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001136 413.0
DYD1_k127_5565992_3 Part of the MsrPQ system that repairs oxidized periplasmic proteins containing methionine sulfoxide residues (Met-O), using respiratory chain electrons. Thus protects these proteins from oxidative-stress damage caused by reactive species of oxygen and chlorine generated by the host defense mechanisms. MsrPQ is essential for the maintenance of envelope integrity under bleach stress, rescuing a wide series of structurally unrelated periplasmic proteins from methionine oxidation. MsrQ provides electrons for reduction to the reductase catalytic subunit MsrP, using the quinone pool of the respiratory chain K17247 - - 0.0000000000000000000000000000000000000000000000000000001024 203.0
DYD1_k127_5565992_4 Belongs to the purine pyrimidine phosphoribosyltransferase family K00760 - 2.4.2.8 0.0000000000000000000000000000000000000000000000000000004794 198.0
DYD1_k127_5565992_5 transport - - - 0.000000000000000002485 95.0
DYD1_k127_5585797_0 ribosylpyrimidine nucleosidase activity K01239 - 3.2.2.1 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001583 373.0
DYD1_k127_5585797_1 Belongs to the D-alanine--D-alanine ligase family K01921,K01955 - 6.3.2.4,6.3.5.5 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000001403 308.0
DYD1_k127_5585797_2 Catalyzes the phosphorylation of ribose at O-5 in a reaction requiring ATP and magnesium. The resulting D-ribose-5- phosphate can then be used either for sythesis of nucleotides, histidine, and tryptophan, or as a component of the pentose phosphate pathway K00852 - 2.7.1.15 0.0000000000000000000000000000000000000000000000000000000061 207.0
DYD1_k127_5585797_3 bleomycin resistance protein - - - 0.0000000000000000000000000000000000000000008542 169.0
DYD1_k127_5585797_4 efflux transmembrane transporter activity - - - 0.0000000000000000000000000000000001942 143.0
DYD1_k127_5585797_5 - K02450 - - 0.000000000000000000000000000000002414 139.0
DYD1_k127_5585797_6 Gamma-glutamyl cyclotransferase, AIG2-like - - - 0.000000000000000000000000000005971 131.0
DYD1_k127_5585797_7 Smr domain - - - 0.000009522 52.0
DYD1_k127_559540_0 CarboxypepD_reg-like domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003318 485.0
DYD1_k127_559540_1 ATP binding to DnaK triggers the release of the substrate protein, thus completing the reaction cycle. Several rounds of ATP-dependent interactions between DnaJ, DnaK and GrpE are required for fully efficient folding. Also involved, together with DnaK and GrpE, in the DNA replication of plasmids through activation of initiation proteins K03686 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002874 404.0
DYD1_k127_559540_10 Serine aminopeptidase, S33 K01048 - 3.1.1.5 0.00000000000000000000000000000000000002262 162.0
DYD1_k127_559540_11 Belongs to the acetyltransferase family. ArgA subfamily K00619 - 2.3.1.1 0.00000000000000000000000000000000000212 143.0
DYD1_k127_559540_12 Belongs to the ompA family - - - 0.000000000000000000000000000000951 135.0
DYD1_k127_559540_13 - - - - 0.00000000000000000000003942 101.0
DYD1_k127_559540_14 WD40-like Beta Propeller Repeat - - - 0.0000000000000000004619 100.0
DYD1_k127_559540_16 - - - - 0.0001261 49.0
DYD1_k127_559540_2 Metallopeptidase family M24 - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001875 352.0
DYD1_k127_559540_3 WD40 domain protein beta Propeller K12132 - 2.7.11.1 0.000000000000000000000000000000000000000000000000000000000000000000000000001104 286.0
DYD1_k127_559540_4 Alanine racemase K20757 - 4.3.1.27 0.00000000000000000000000000000000000000000000000000000000000000000001325 246.0
DYD1_k127_559540_5 Involved in the tonB-independent uptake of proteins K08884,K12132 - 2.7.11.1 0.00000000000000000000000000000000000000000000000000000000000000000002862 261.0
DYD1_k127_559540_6 Competence-damaged protein K03742 - 3.5.1.42 0.000000000000000000000000000000000000000000000000000000000000002606 226.0
DYD1_k127_559540_7 phosphorelay signal transduction system - - - 0.00000000000000000000000000000000000000000000000001236 206.0
DYD1_k127_559540_8 phosphorelay signal transduction system - - - 0.000000000000000000000000000000000000000000000000998 200.0
DYD1_k127_559540_9 Participates actively in the response to hyperosmotic and heat shock by preventing the aggregation of stress-denatured proteins, in association with DnaK and GrpE. It is the nucleotide exchange factor for DnaK and may function as a thermosensor. Unfolded proteins bind initially to DnaJ K03687 - - 0.000000000000000000000000000000000000003432 153.0
DYD1_k127_5598751_0 protein secretion by the type I secretion system K11085 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001214 542.0
DYD1_k127_5600648_0 Belongs to the NiFe NiFeSe hydrogenase large subunit family K06281 - 1.12.99.6 3.762e-244 768.0
DYD1_k127_5600648_1 ABC transporter, ATP-binding protein - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008926 573.0
DYD1_k127_5600648_10 PFAM MgtC SapB transporter K07507 - - 0.00000000000000000000000000000000000000000004565 168.0
DYD1_k127_5600648_11 COG2931 RTX toxins and related Ca2 -binding proteins - - - 0.0000000000000000000000000000000000000000008055 181.0
DYD1_k127_5600648_12 PFAM peptidase M52 hydrogen uptake protein K03605 - - 0.000000000000000000000000000000000000001559 153.0
DYD1_k127_5600648_13 Domain of unknown function (DUF4112) - - - 0.0000000000000000000000000000000000001717 149.0
DYD1_k127_5600648_14 - - - - 0.0000000000000000000000000000001473 136.0
DYD1_k127_5600648_15 ATP synthase, subunit C K02124 - - 0.0000000000000005025 81.0
DYD1_k127_5600648_16 Di-iron-containing protein involved in the repair of iron-sulfur clusters - - - 0.00000000001699 72.0
DYD1_k127_5600648_2 COG1012 NAD-dependent aldehyde dehydrogenases K00135 - 1.2.1.16,1.2.1.20,1.2.1.79 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001541 518.0
DYD1_k127_5600648_3 Small subunit K06282 - 1.12.99.6 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001001 443.0
DYD1_k127_5600648_4 Catalyzes the interconversion of methylthioribose-1- phosphate (MTR-1-P) into methylthioribulose-1-phosphate (MTRu-1- P) K08963 - 5.3.1.23 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008212 324.0
DYD1_k127_5600648_5 PFAM V-type ATPase 116 kDa K02123 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003931 337.0
DYD1_k127_5600648_6 Inositol monophosphatase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001118 311.0
DYD1_k127_5600648_7 PFAM alkyl hydroperoxide reductase Thiol specific antioxidant Mal allergen K03564 - 1.11.1.15 0.0000000000000000000000000000000000000000000000000000000000001082 221.0
DYD1_k127_5600648_8 respiratory electron transport chain K03620 GO:0003674,GO:0005488,GO:0005575,GO:0005623,GO:0005886,GO:0005887,GO:0006091,GO:0006113,GO:0008150,GO:0008152,GO:0009061,GO:0009987,GO:0015980,GO:0016020,GO:0016021,GO:0020037,GO:0031224,GO:0031226,GO:0032991,GO:0044237,GO:0044425,GO:0044459,GO:0044464,GO:0044569,GO:0045333,GO:0046906,GO:0048037,GO:0055114,GO:0071944,GO:0097159,GO:1901363,GO:1902494 - 0.00000000000000000000000000000000000000000000000000001553 208.0
DYD1_k127_5600648_9 - - - - 0.00000000000000000000000000000000000000000000000006858 191.0
DYD1_k127_5601667_0 NhaP-type Na H and K H - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002513 576.0
DYD1_k127_5601667_1 Sodium/hydrogen exchanger family - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001652 438.0
DYD1_k127_5601667_2 NhaP-type Na H and K H - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001119 325.0
DYD1_k127_5601667_3 KR domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000001661 299.0
DYD1_k127_5601667_4 Belongs to the short-chain dehydrogenases reductases (SDR) family K00059 - 1.1.1.100 0.0000000000000000000000000000000000000000000000001406 187.0
DYD1_k127_5608566_0 Involved in cell wall formation. Catalyzes the final step in the synthesis of UDP-N-acetylmuramoyl-pentapeptide, the precursor of murein K01929 - 6.3.2.10 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001079 582.0
DYD1_k127_5608566_1 acid to the nucleotide precursor UDP-N-acetylmuramoyl-L-alanyl-D-glutamate (UMAG) in the biosynthesis of bacterial cell-wall peptidoglycan K01928 - 6.3.2.13 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002748 566.0
DYD1_k127_5621788_0 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain K00382 - 1.8.1.4 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002235 587.0
DYD1_k127_5621788_1 Transketolase, pyrimidine binding domain K00162 - 1.2.4.1 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008189 500.0
DYD1_k127_5621788_10 - - - - 0.000000000000000002267 91.0
DYD1_k127_5621788_11 - - - - 0.00000000000000009645 87.0
DYD1_k127_5621788_12 Putative regulatory protein - - - 0.0000000002419 62.0
DYD1_k127_5621788_13 - - - - 0.0000003267 55.0
DYD1_k127_5621788_14 symporter activity K03307,K11928 - - 0.00002083 47.0
DYD1_k127_5621788_2 The pyruvate dehydrogenase complex catalyzes the overall conversion of pyruvate to acetyl-CoA and CO(2) K00627 - 2.3.1.12 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001585 437.0
DYD1_k127_5621788_3 Catalyzes the radical-mediated insertion of two sulfur atoms into the C-6 and C-8 positions of the octanoyl moiety bound to the lipoyl domains of lipoate-dependent enzymes, thereby converting the octanoylated domains into lipoylated derivatives K03644 - 2.8.1.8 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008227 403.0
DYD1_k127_5621788_4 The pyruvate dehydrogenase complex catalyzes the overall conversion of pyruvate to acetyl-CoA and CO(2) K00161 - 1.2.4.1 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001788 386.0
DYD1_k127_5621788_5 histidine kinase A domain protein K02482 - 2.7.13.3 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000001734 307.0
DYD1_k127_5621788_6 - - - - 0.00000000000000000000000000000000000000000000000000000000000002652 223.0
DYD1_k127_5621788_7 FAD dependent oxidoreductase K03153 - 1.4.3.19 0.0000000000000000000000000000000000000000000000000000000004537 216.0
DYD1_k127_5621788_8 Protein of unknown function (DUF3108) - - - 0.000000000000000000000000000000000000000000000000000000009787 214.0
DYD1_k127_5621788_9 Glycosyl transferase family 2 K08301 - - 0.00000000000000000000000000000000000000000001594 171.0
DYD1_k127_57209_0 Cupin 2, conserved barrel domain protein - - - 0.00000000000000000000000000000000000000000000000001538 187.0
DYD1_k127_57209_1 Dodecin K09165 - - 0.000000000000000000000000001068 113.0
DYD1_k127_57209_2 Oxidoreductase family, C-terminal alpha/beta domain K13016 - 1.1.1.335 0.0000000000002371 77.0
DYD1_k127_5725426_0 Belongs to the RNA methyltransferase TrmD family K00554 - 2.1.1.228 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000005228 288.0
DYD1_k127_5725426_1 This protein is located at the 30S-50S ribosomal subunit interface and may play a role in the structure and function of the aminoacyl-tRNA binding site K02884 - - 0.000000000000000000000000000000000000000000001047 167.0
DYD1_k127_5725426_2 Endonuclease that specifically degrades the RNA of RNA- DNA hybrids K03470 GO:0003674,GO:0003824,GO:0004518,GO:0004519,GO:0004521,GO:0004523,GO:0004540,GO:0005575,GO:0005622,GO:0005623,GO:0006139,GO:0006259,GO:0006260,GO:0006261,GO:0006271,GO:0006273,GO:0006281,GO:0006298,GO:0006401,GO:0006725,GO:0006807,GO:0006950,GO:0006974,GO:0008150,GO:0008152,GO:0009056,GO:0009057,GO:0009058,GO:0009059,GO:0009987,GO:0016070,GO:0016787,GO:0016788,GO:0016891,GO:0016893,GO:0019439,GO:0022616,GO:0032299,GO:0032991,GO:0033554,GO:0033567,GO:0034641,GO:0034645,GO:0034655,GO:0043137,GO:0043170,GO:0044237,GO:0044238,GO:0044248,GO:0044249,GO:0044260,GO:0044265,GO:0044270,GO:0044424,GO:0044464,GO:0046483,GO:0046700,GO:0050896,GO:0051716,GO:0071704,GO:0090304,GO:0090305,GO:0090501,GO:0090502,GO:0140098,GO:1901360,GO:1901361,GO:1901575,GO:1901576 3.1.26.4 0.00000000000284 74.0
DYD1_k127_5729305_0 Has an important function as a repair enzyme for proteins that have been inactivated by oxidation. Catalyzes the reversible oxidation-reduction of methionine sulfoxide in proteins to methionine K07304 - 1.8.4.11 0.00000000000000000000000000000000000000000000000000000000000000000000000001618 256.0
DYD1_k127_5729305_1 tRNA wobble adenosine to inosine editing - - - 0.00000000000000000000000000000000000000000000000000000000000000000000004786 244.0
DYD1_k127_5729305_2 Putative cyclase - - - 0.0000000000000000000000000000000000000000381 161.0
DYD1_k127_5729305_3 Belongs to the UPF0145 family - - - 0.00000000000000000000000000000000000000207 149.0
DYD1_k127_5729305_4 Putative phosphatase (DUF442) - - - 0.0000000000000000001818 95.0
DYD1_k127_5777679_0 PAS domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002763 406.0
DYD1_k127_5777679_1 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003263 329.0
DYD1_k127_5777679_2 Transcriptional regulatory protein, C terminal K02483,K07665 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005922 314.0
DYD1_k127_5795640_0 this subunit has chaperone activity. The binding of ATP and its subsequent hydrolysis by HslU are essential for unfolding of protein substrates subsequently hydrolyzed by HslV. HslU recognizes the N-terminal part of its protein substrates and unfolds these before they are guided to HslV for hydrolysis K03667 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004294 577.0
DYD1_k127_5795640_1 Reversibly catalyzes the transfer of the carbamoyl group from carbamoyl phosphate (CP) to the N(epsilon) atom of ornithine (ORN) to produce L-citrulline K00611 - 2.1.3.3 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003154 429.0
DYD1_k127_5795640_2 Phage integrase, N-terminal SAM-like domain K03733 - - 0.00000000000000000000000000000000000000000000000000000000000000000000008786 245.0
DYD1_k127_5795640_3 Protease subunit of a proteasome-like degradation complex believed to be a general protein degrading machinery K01419 - 3.4.25.2 0.0000000000000000000000000000000000000000000000000000000000000000000003327 242.0
DYD1_k127_5795640_4 The glycine cleavage system catalyzes the degradation of glycine K00605 - 2.1.2.10 0.00000000001926 72.0
DYD1_k127_5803383_0 Zinc carboxypeptidase K14054 - - 1.939e-305 955.0
DYD1_k127_5803383_1 Resistance to Hg(2 ) in bacteria appears to be governed by a specialized system which includes mercuric reductase. MerA protein is responsible for volatilizing mercury as Hg(0) K00520 - 1.16.1.1 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000282 444.0
DYD1_k127_5803383_10 NHL repeat - - - 0.00000000000000000000000000000000000000000000000003408 194.0
DYD1_k127_5803383_11 helix_turn_helix, arabinose operon control protein - - - 0.000000000000000000000000000000000000000000000003258 185.0
DYD1_k127_5803383_12 methylamine metabolic process K15977 - - 0.000000000000000000000000000000000000000001194 160.0
DYD1_k127_5803383_13 DinB family - - - 0.00000000000000000000000000000000000007929 149.0
DYD1_k127_5803383_14 - - - - 0.00000000000000000000000000000000005074 149.0
DYD1_k127_5803383_15 helix_turn_helix, mercury resistance K19591 - - 0.000000000000000000000000000000002539 134.0
DYD1_k127_5803383_16 Alkylmercury lyase K00221 - 4.99.1.2 0.000000000000000000000000000000004924 137.0
DYD1_k127_5803383_17 HxlR-like helix-turn-helix - - - 0.0000000000000000000000000000000103 131.0
DYD1_k127_5803383_18 YCII-related domain - - - 0.00000000000000000000000000000001309 133.0
DYD1_k127_5803383_19 - - - - 0.000000000000000000000000002008 121.0
DYD1_k127_5803383_2 belongs to the sigma-70 factor family K03088 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002407 428.0
DYD1_k127_5803383_20 Transcriptional regulator K19591 - - 0.000000000000000000000001387 111.0
DYD1_k127_5803383_21 Rhodanese domain protein - - - 0.00000000000000000000001011 109.0
DYD1_k127_5803383_22 Trehalose utilisation - - - 0.0000000000009569 81.0
DYD1_k127_5803383_23 Heavy-metal-associated domain - - - 0.000000000001081 73.0
DYD1_k127_5803383_24 MerT mercuric transport protein K08363 - - 0.0000000001065 72.0
DYD1_k127_5803383_26 Heavy-metal-associated domain K01534 - 3.6.3.3,3.6.3.5 0.00005104 51.0
DYD1_k127_5803383_27 - - - - 0.0003513 52.0
DYD1_k127_5803383_3 efflux transmembrane transporter activity - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000177 390.0
DYD1_k127_5803383_4 Protein of unknown function (DUF3179) - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000002346 292.0
DYD1_k127_5803383_5 DinB family - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000001385 278.0
DYD1_k127_5803383_6 Antioxidant protein with alkyl hydroperoxidase activity. Required for the reduction of the AhpC active site cysteine residues and for the regeneration of the AhpC enzyme activity - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000009535 253.0
DYD1_k127_5803383_7 lipolytic protein G-D-S-L family - - - 0.000000000000000000000000000000000000000000000000000000000002002 226.0
DYD1_k127_5803383_8 COGs COG5616 integral membrane protein - - - 0.000000000000000000000000000000000000000000000000000001798 218.0
DYD1_k127_5803383_9 transcriptional regulator K16137 GO:0000976,GO:0001067,GO:0003674,GO:0003676,GO:0003677,GO:0003690,GO:0003700,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006355,GO:0008150,GO:0009889,GO:0010468,GO:0010556,GO:0019219,GO:0019222,GO:0031323,GO:0031326,GO:0043565,GO:0044212,GO:0044424,GO:0044444,GO:0044464,GO:0050789,GO:0050794,GO:0051171,GO:0051252,GO:0060255,GO:0065007,GO:0080090,GO:0097159,GO:0140110,GO:1901363,GO:1903506,GO:1990837,GO:2000112,GO:2001141 - 0.0000000000000000000000000000000000000000000000000004004 192.0
DYD1_k127_5837643_0 PFAM Prolyl oligopeptidase, N-terminal beta-propeller domain K01322 - 3.4.21.26 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004366 471.0
DYD1_k127_5842064_0 protein kinase activity - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001297 478.0
DYD1_k127_5842064_1 Aldo/keto reductase family - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003484 481.0
DYD1_k127_5842064_2 protein kinase activity K12132 - 2.7.11.1 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000026 424.0
DYD1_k127_5842064_3 Bacterial protein of unknown function (DUF839) K07093 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002437 307.0
DYD1_k127_5842064_4 Belongs to the iron ascorbate-dependent oxidoreductase family - - - 0.00000000000000000000000000000000000000000000000000000000000000000005752 250.0
DYD1_k127_5842064_5 protein kinase activity - - - 0.00000000000000000000000000000000000000000000000000000000000000001718 234.0
DYD1_k127_5842064_6 TIGRFAM clan AA aspartic protease, AF_0612 family - - - 0.0000000000000000000000000000000000000009909 160.0
DYD1_k127_5842064_7 Protein kinase domain K12132 - 2.7.11.1 0.0000000000000129 82.0
DYD1_k127_584831_0 NHL repeat - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009664 410.0
DYD1_k127_584831_1 Fumarylacetoacetate (FAA) hydrolase family - - - 0.00000000000001104 87.0
DYD1_k127_5881694_0 GDSL-like Lipase/Acylhydrolase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004634 305.0
DYD1_k127_5881694_1 SMART ATPase, AAA type, core K05847 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000003231 300.0
DYD1_k127_5881694_10 Protein of unknown function (DUF692) K09930 - - 0.000000000000000001133 96.0
DYD1_k127_5881694_11 - - - - 0.00000000000007472 81.0
DYD1_k127_5881694_2 PFAM Substrate binding domain of ABC-type glycine betaine transport system K05845,K05846 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000002692 284.0
DYD1_k127_5881694_3 PFAM Binding-protein-dependent transport system inner membrane component K05846 - - 0.00000000000000000000000000000000000000000000000000000000000000008044 229.0
DYD1_k127_5881694_4 [2Fe-2S] binding domain K03518 - 1.2.5.3 0.000000000000000000000000000000000000000000000000000000000000000244 223.0
DYD1_k127_5881694_5 dimethylhistidine N-methyltransferase activity K18911 - 2.1.1.44 0.000000000000000000000000000000000000000000000000000000000000007313 229.0
DYD1_k127_5881694_6 aldo keto reductase K18471 - - 0.0000000000000000000000000000000000000000000003819 183.0
DYD1_k127_5881694_7 Cupin 2, conserved barrel domain protein - - - 0.000000000000000000000000002337 118.0
DYD1_k127_5881694_8 Domain of unknown function (DU1801) - - - 0.0000000000000000000000664 102.0
DYD1_k127_5881694_9 Cupin 2, conserved barrel domain protein - - - 0.000000000000000000001441 102.0
DYD1_k127_589212_0 Belongs to the sodium solute symporter (SSF) (TC 2.A.21) family K14393 - - 1.591e-257 804.0
DYD1_k127_589212_1 Peptidase family M28 - - - 6.977e-203 645.0
DYD1_k127_589212_10 PFAM PKD domain containing protein - - - 0.000000000005351 79.0
DYD1_k127_589212_11 Transposase IS116 IS110 IS902 family protein - - - 0.0000000197 57.0
DYD1_k127_589212_12 Protein kinase domain K12132 - 2.7.11.1 0.00000072 59.0
DYD1_k127_589212_13 acetyltransferase K00657 - 2.3.1.57 0.000001418 56.0
DYD1_k127_589212_14 transposase IS116 IS110 IS902 family - - - 0.0003156 48.0
DYD1_k127_589212_2 Alpha-L-fucosidase K01206 - 3.2.1.51 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003998 522.0
DYD1_k127_589212_3 Transposase (IS116 IS110 IS902 family) - - - 0.0000000000000000000000000000000000000000001925 177.0
DYD1_k127_589212_4 Transcription elongation factor, N-terminal K03624 - - 0.00000000000000000000000000000000000000006523 160.0
DYD1_k127_589212_5 - - - - 0.0000000000000000000000000000000000006272 145.0
DYD1_k127_589212_6 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily - - - 0.00000000000000000000000000000001022 128.0
DYD1_k127_589212_7 Domain of unknown function (DUF4212) - - - 0.00000000000000000000000000000002769 127.0
DYD1_k127_589212_8 phosphorelay signal transduction system - - - 0.0000000000000000245 85.0
DYD1_k127_589212_9 phosphorelay signal transduction system - - - 0.0000000000000002465 88.0
DYD1_k127_5906245_0 2-oxoglutarate dehydrogenase N-terminus K00164 - 1.2.4.2 1.153e-195 642.0
DYD1_k127_5906245_1 DinB family - - - 0.000000000000000000000000000000000000003318 151.0
DYD1_k127_5908529_0 efflux transmembrane transporter activity K02004 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001313 464.0
DYD1_k127_5908529_1 efflux transmembrane transporter activity K02004 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001978 396.0
DYD1_k127_5908529_2 Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family K02005 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001352 336.0
DYD1_k127_5908529_3 pfam abc K02003 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002917 310.0
DYD1_k127_5908529_4 GlcNAc-PI de-N-acetylase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000006472 258.0
DYD1_k127_5908529_5 - - - - 0.00000000000000000005004 92.0
DYD1_k127_5908529_6 - - - - 0.000000000000005409 81.0
DYD1_k127_5908529_7 Cytochrome bd-type quinol oxidase subunit 1 K00425 - 1.10.3.14 0.00000002714 59.0
DYD1_k127_5924608_0 DEAD DEAH box helicase K03724 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006736 559.0
DYD1_k127_5924608_1 methyltransferase K03183 - 2.1.1.163,2.1.1.201 0.000000000000000000000000000000000000000000000000000000000000007205 230.0
DYD1_k127_5924608_2 - - - - 0.0000000002707 67.0
DYD1_k127_5929259_0 Outer membrane protein beta-barrel family - - - 5.727e-210 689.0
DYD1_k127_5929259_1 cellulose binding - - - 5.213e-206 667.0
DYD1_k127_5929259_2 Glutamine synthetase, beta-Grasp domain K01915 - 6.3.1.2 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003863 559.0
DYD1_k127_5929259_3 - - - - 0.00000000000000000000000000000000000000000000000000000000000000000000003953 258.0
DYD1_k127_5929259_4 Di-haem cytochrome c peroxidase K00428 - 1.11.1.5 0.000000000000000000000000000000000000000000000000000000000000000005111 248.0
DYD1_k127_5929259_5 Pfam:SusD K21572 - - 0.00000000000000000000000000000000000000000000000000004556 203.0
DYD1_k127_5929259_6 COG4775 Outer membrane protein protective antigen OMA87 - - - 0.00000000000009013 85.0
DYD1_k127_5929259_7 ribosomal protein - - - 0.000001503 55.0
DYD1_k127_5931640_0 non-ribosomal peptide synthetase - - - 3.244e-241 794.0
DYD1_k127_5931640_1 Histidine ammonia-lyase K01745 - 4.3.1.3 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001224 600.0
DYD1_k127_5931640_2 Thioesterase domain - - - 0.0000000000000000000000000000000000000000000000000000000000000005287 233.0
DYD1_k127_5931640_3 Sulfotransferase family - - - 0.0000000000000000000000001372 123.0
DYD1_k127_5931640_4 Helix-turn-helix domain - - - 0.00000000000447 67.0
DYD1_k127_5935969_0 Acts as a processive, ATP-dependent zinc metallopeptidase for both cytoplasmic and membrane proteins. Plays a role in the quality control of integral membrane proteins K03798 - - 6.739e-268 839.0
DYD1_k127_5935969_1 Phosphoribosyl transferase domain K00760 - 2.4.2.8 0.000000000000000000000000000000000000000000000000000000000000007586 229.0
DYD1_k127_5935969_2 TilS substrate C-terminal domain K04075,K15780 - 2.4.2.8,6.3.4.19 0.000000000000000000000000000000000000009455 164.0
DYD1_k127_5935969_3 Tellurite resistance protein TerB - - - 0.000000000000000000000000196 110.0
DYD1_k127_5955696_0 Molybdopterin oxidoreductase Fe4S4 domain K08357 - - 0.0000000000000000000000000000000000000000000000000000006272 199.0
DYD1_k127_5955696_1 Cytochrome c7 and related cytochrome c - - - 0.000000000000000000000000000000000000002135 153.0
DYD1_k127_5960881_0 Catalyzes the conversion of acetate into acetyl-CoA (AcCoA), an essential intermediate at the junction of anabolic and catabolic pathways. AcsA undergoes a two-step reaction. In the first half reaction, AcsA combines acetate with ATP to form acetyl-adenylate (AcAMP) intermediate. In the second half reaction, it can then transfer the acetyl group from AcAMP to the sulfhydryl group of CoA, forming the product AcCoA K01895 - 6.2.1.1 5.169e-315 977.0
DYD1_k127_5960881_1 Insulinase (Peptidase family M16) K07263 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006734 591.0
DYD1_k127_5960881_10 - - - - 0.000000000000001379 80.0
DYD1_k127_5960881_11 Belongs to the CDP-alcohol phosphatidyltransferase class-I family K00995,K08744 GO:0003674,GO:0003824,GO:0006629,GO:0006644,GO:0006650,GO:0006793,GO:0006796,GO:0008150,GO:0008152,GO:0008444,GO:0008610,GO:0008654,GO:0009058,GO:0009987,GO:0016740,GO:0016772,GO:0016780,GO:0017169,GO:0019637,GO:0044237,GO:0044238,GO:0044249,GO:0044255,GO:0045017,GO:0046474,GO:0046486,GO:0071704,GO:0090407,GO:1901576 2.7.8.41,2.7.8.5 0.00000003838 61.0
DYD1_k127_5960881_12 STAS domain K04749 - - 0.000000049 59.0
DYD1_k127_5960881_2 ATPases associated with a variety of cellular activities K02193 - 3.6.3.41 0.00000000000000000000000000000000000000000000001476 179.0
DYD1_k127_5960881_3 DSBA-like thioredoxin domain - - - 0.0000000000000000000000000000000000000000000006476 175.0
DYD1_k127_5960881_4 Cyclic nucleotide-monophosphate binding domain - - - 0.0000000000000000000000000000001405 135.0
DYD1_k127_5960881_5 Cold shock K03704 - - 0.00000000000000000000002284 102.0
DYD1_k127_5960881_6 redox protein regulator of disulfide bond formation K07397 - - 0.000000000000000004428 95.0
DYD1_k127_5960881_7 COG2204 Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains K02481,K07714 GO:0003674,GO:0003700,GO:0004857,GO:0006355,GO:0008073,GO:0008150,GO:0009889,GO:0009891,GO:0009893,GO:0010468,GO:0010556,GO:0010557,GO:0010604,GO:0010628,GO:0010967,GO:0019219,GO:0019222,GO:0030234,GO:0031323,GO:0031325,GO:0031326,GO:0031328,GO:0033238,GO:0042979,GO:0043086,GO:0044092,GO:0045893,GO:0045935,GO:0048518,GO:0048522,GO:0050789,GO:0050790,GO:0050794,GO:0051171,GO:0051173,GO:0051252,GO:0051254,GO:0060255,GO:0065007,GO:0065009,GO:0080090,GO:0098772,GO:0140110,GO:1902680,GO:1903506,GO:1903508,GO:2000112,GO:2001141 - 0.00000000000000001831 88.0
DYD1_k127_5960881_8 PFAM Vitamin K epoxide reductase - - - 0.00000000000000006498 91.0
DYD1_k127_5963893_0 protein kinase activity K12132 - 2.7.11.1 0.0000000000000000000000000000000000000000000000000000000000000000000001207 250.0
DYD1_k127_5963893_1 ubiE/COQ5 methyltransferase family - - - 0.0000000000000000000000000000000000000000000000000000000000000002152 228.0
DYD1_k127_5968916_0 STAS domain - - - 0.00000000000000000000000000000000000000002265 155.0
DYD1_k127_5968916_1 Histidine kinase-like ATPase domain K04757 - 2.7.11.1 0.0000000000000000000000327 106.0
DYD1_k127_6026960_0 WD40-like Beta Propeller Repeat K03641,K07277 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002311 385.0
DYD1_k127_6026960_1 Sodium/hydrogen exchanger family - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005614 327.0
DYD1_k127_6026960_2 Phosphorolytic exoribonuclease that removes nucleotide residues following the -CCA terminus of tRNA and adds nucleotides to the ends of RNA molecules by using nucleoside diphosphates as substrates K00989 - 2.7.7.56 0.0000000000000000000000000000000000000000000000000000000000007194 216.0
DYD1_k127_6026960_3 Lipopolysaccharide-assembly - - - 0.000000000000000000000000000000000000002574 154.0
DYD1_k127_6028740_0 MacB-like periplasmic core domain K09808 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009823 363.0
DYD1_k127_6028740_1 Part of the ABC transporter complex LolCDE involved in the translocation of K09810 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000009005 273.0
DYD1_k127_6028740_2 UvrB/uvrC motif K19411 - - 0.0000000000001741 79.0
DYD1_k127_6030197_0 Vitamin B12 dependent methionine synthase, activation K00548 - 2.1.1.13 0.0 1624.0
DYD1_k127_6030197_1 Methylenetetrahydrofolate reductase K00297,K00547 - 1.5.1.20,2.1.1.10 1.434e-226 719.0
DYD1_k127_6030197_2 Transglycosylase K05365,K05366 - 2.4.1.129,3.4.16.4 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003827 529.0
DYD1_k127_6030197_3 Belongs to the UPF0235 family K09131 - - 0.000000000000000000004668 96.0
DYD1_k127_6048469_0 A type II topoisomerase that negatively supercoils closed circular double-stranded (ds) DNA in an ATP-dependent manner to modulate DNA topology and maintain chromosomes in an underwound state. Negative supercoiling favors strand separation, and DNA replication, transcription, recombination and repair, all of which involve strand separation. Also able to catalyze the interconversion of other topological isomers of dsDNA rings, including catenanes and knotted rings. Type II topoisomerases break and join 2 DNA strands simultaneously in an ATP-dependent manner K02470 - 5.99.1.3 0.0 1018.0
DYD1_k127_6048469_1 Dehydrogenase K00140 - 1.2.1.18,1.2.1.27 4.588e-209 663.0
DYD1_k127_6048469_2 siderophore transport - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003467 580.0
DYD1_k127_6048469_3 Glycosyl hydrolases family 15 - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001091 526.0
DYD1_k127_6098729_0 - - - - 6.862e-290 906.0
DYD1_k127_6098729_1 56kDa selenium binding protein (SBP56) K17285 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000243 297.0
DYD1_k127_6098729_2 AAA domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000001601 284.0
DYD1_k127_6098729_3 Domain of unknown function (DUF305) - - - 0.000000000000000000000000000000000000000000000000000000000000000000000004866 252.0
DYD1_k127_6098729_4 Putative lumazine-binding - - - 0.000000000000000000003823 98.0
DYD1_k127_6132537_0 cellulose binding - - - 0.0 1264.0
DYD1_k127_6132537_1 PFAM glycosyl hydrolase BNR repeat-containing protein - - - 0.0 1178.0
DYD1_k127_6132537_10 MOSC domain - - - 0.0000000000000000000000000000000000000000000000002995 180.0
DYD1_k127_6132537_11 EVE domain - - - 0.000000000000000000000000000000000000000000007755 166.0
DYD1_k127_6132537_12 Cysteine-rich secretory protein family - - - 0.000000000000000000000000000001915 126.0
DYD1_k127_6132537_13 Scaffold protein Nfu/NifU N terminal - - - 0.0000000000000000000000000007694 130.0
DYD1_k127_6132537_14 Lactonase, 7-bladed beta-propeller - - - 0.00000000000000001315 94.0
DYD1_k127_6132537_15 His Kinase A (phosphoacceptor) domain - - - 0.000000000000002926 81.0
DYD1_k127_6132537_2 COG0367 Asparagine synthase (glutamine-hydrolyzing) K01953 - 6.3.5.4 2.855e-251 791.0
DYD1_k127_6132537_3 RimK-like ATP-grasp domain - - - 1.671e-230 729.0
DYD1_k127_6132537_4 DinB superfamily - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000377 537.0
DYD1_k127_6132537_5 M42 glutamyl aminopeptidase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001766 501.0
DYD1_k127_6132537_6 cAMP biosynthetic process K12132 - 2.7.11.1 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005641 376.0
DYD1_k127_6132537_7 Histidine-specific methyltransferase, SAM-dependent K18911 - 2.1.1.44 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003155 334.0
DYD1_k127_6132537_8 Alpha/beta hydrolase family K07020 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000098 250.0
DYD1_k127_6132537_9 Belongs to the MsrB Met sulfoxide reductase family K07305 - 1.8.4.12 0.0000000000000000000000000000000000000000000000000000000001981 207.0
DYD1_k127_614020_0 Peptidase family M48 - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002662 423.0
DYD1_k127_614020_1 response regulator K07782 - - 0.0000000000000000000000000000000000000000004271 168.0
DYD1_k127_614020_2 - - - - 0.00000000000000000000000000000000000000005088 156.0
DYD1_k127_614020_3 response regulator K07782 - - 0.000000000000000004262 85.0
DYD1_k127_614020_4 - - - - 0.0000005318 54.0
DYD1_k127_6146567_0 efflux transmembrane transporter activity - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009618 593.0
DYD1_k127_6146567_1 efflux transmembrane transporter activity K02004 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006425 500.0
DYD1_k127_6146567_2 efflux transmembrane transporter activity - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007087 476.0
DYD1_k127_6146567_3 efflux transmembrane transporter activity - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002316 472.0
DYD1_k127_6146567_4 efflux transmembrane transporter activity K02004 - - 0.0000000000000000000001416 114.0
DYD1_k127_6152211_0 YHS domain K01533 - 3.6.3.4 0.0 1043.0
DYD1_k127_6152211_1 Catalyzes the conversion of 3-deoxy-D-arabino- heptulosonate 7-phosphate (DAHP) to dehydroquinate (DHQ) K01735 - 4.2.3.4 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000002301 310.0
DYD1_k127_6152211_2 isomerase activity K06998 - 5.3.3.17 0.000000000000000000000000000000000000000000000000000000000000004237 228.0
DYD1_k127_6152211_3 Cobalamin adenosyltransferase K00798 - 2.5.1.17 0.000000000000000000000000000000000000000000000000000000000000149 218.0
DYD1_k127_6152211_4 SnoaL-like domain - - - 0.0000000000000000000000000000000001733 138.0
DYD1_k127_6159852_0 oxidoreductase activity K21883 - 1.1.1.401 0.000000000000000000000000000000000000000000000000000000000000005981 225.0
DYD1_k127_6159852_1 PFAM Uncharacterised protein family UPF0150 - - - 0.0000000000000000000000006194 109.0
DYD1_k127_6159852_2 Isoprenylcysteine carboxyl methyltransferase (ICMT) family - - - 0.00000000000002126 81.0
DYD1_k127_6164919_0 N-acetylglucosaminylinositol deacetylase activity - - - 0.000000000000000000000000000000000000000000000000000000002156 210.0
DYD1_k127_6164919_1 - - - - 0.0000000000000000000000000000000001137 136.0
DYD1_k127_6164919_2 SnoaL-like domain - - - 0.0000000000000719 78.0
DYD1_k127_617194_0 Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family - - - 0.0 1159.0
DYD1_k127_617194_1 Outer membrane efflux protein - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000002379 274.0
DYD1_k127_617194_2 Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family - - - 0.00000000000000000000000000000000000000000000000001173 204.0
DYD1_k127_617194_3 cellulose binding - - - 0.00000000000000000000000000000000000000000005368 164.0
DYD1_k127_617194_4 PFAM Bacterial regulatory proteins, tetR family - - - 0.0000000000000000000001485 105.0
DYD1_k127_6201707_0 membrane organization - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000392 316.0
DYD1_k127_6201707_1 Surface antigen - - - 0.00000000000000000000000000000000000000000000000000000000000002146 222.0
DYD1_k127_6201707_2 Catalyzes the reversible transfer of the terminal phosphate of ATP to form a long-chain polyphosphate (polyP) K00937 GO:0000287,GO:0001666,GO:0003674,GO:0003824,GO:0005488,GO:0005575,GO:0005623,GO:0005886,GO:0006464,GO:0006468,GO:0006793,GO:0006796,GO:0006807,GO:0006950,GO:0006979,GO:0007154,GO:0008150,GO:0008152,GO:0008976,GO:0009267,GO:0009405,GO:0009605,GO:0009628,GO:0009987,GO:0009991,GO:0015968,GO:0016020,GO:0016301,GO:0016310,GO:0016740,GO:0016772,GO:0016776,GO:0019538,GO:0031667,GO:0031668,GO:0031669,GO:0033554,GO:0036211,GO:0036293,GO:0040007,GO:0042594,GO:0043167,GO:0043169,GO:0043170,GO:0043412,GO:0044237,GO:0044238,GO:0044260,GO:0044267,GO:0044419,GO:0044464,GO:0046777,GO:0046872,GO:0050896,GO:0051704,GO:0051716,GO:0070482,GO:0071496,GO:0071704,GO:0071944,GO:1901564 2.7.4.1 0.00000000000000000000000000000000000000000000000000000000000006272 237.0
DYD1_k127_6205864_0 Belongs to the peptidase M50B family - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001061 385.0
DYD1_k127_6205864_1 His Kinase A (phosphoacceptor) domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002032 384.0
DYD1_k127_6205864_2 response regulator, receiver K07814 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001571 373.0
DYD1_k127_6205864_3 PFAM regulatory protein LuxR - - - 0.000000000000000000000000000000000000000000000000000000000000000000000001006 254.0
DYD1_k127_6205864_4 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase K03406,K21009 - - 0.0000000000000000000000000000000000000000000000000000000000000000002613 258.0
DYD1_k127_6205864_5 Putative diguanylate phosphodiesterase - - - 0.0000000000000000000000000000000000006 158.0
DYD1_k127_6205864_6 PFAM response regulator receiver - - - 0.0000000000000000000000000000003258 127.0
DYD1_k127_6205864_7 cheY-homologous receiver domain - - - 0.0000000000000000000004427 103.0
DYD1_k127_6205864_8 phosphorelay sensor kinase activity K03406,K07675,K17763,K21009 - 2.7.13.3 0.000000000000000214 93.0
DYD1_k127_6205864_9 Multi-sensor signal transduction histidine kinase - - - 0.000001123 60.0
DYD1_k127_6219515_0 Part of the Sec protein translocase complex. Interacts with the SecYEG preprotein conducting channel. Has a central role in coupling the hydrolysis of ATP to the transfer of proteins into and across the cell membrane, serving as an ATP-driven molecular motor driving the stepwise translocation of polypeptide chains across the membrane K03070 - - 0.0 1233.0
DYD1_k127_6219515_1 damaged site, the DNA wraps around one UvrB monomer. DNA wrap is dependent on ATP binding by UvrB and probably causes local melting of the DNA helix, facilitating insertion of UvrB beta-hairpin between the DNA strands. Then UvrB probes one DNA strand for the presence of a lesion. If a lesion is found the UvrA subunits dissociate and the UvrB-DNA preincision complex is formed. This complex is subsequently bound by UvrC and the second UvrB is released. If no lesion is found, the DNA wraps around the other UvrB subunit that will check the other stand for damage K03702 - - 1.407e-315 978.0
DYD1_k127_6219515_10 RadC-like JAB domain K03630 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000004539 258.0
DYD1_k127_6219515_11 NAD(P)H-binding K08679 - 5.1.3.6 0.0000000000000000000000000000000000000000000000000000000000000000000000007071 259.0
DYD1_k127_6219515_12 Oxidoreductase family, NAD-binding Rossmann fold - - - 0.0000000000000000000000000000000000000000000000000000000000000000004512 234.0
DYD1_k127_6219515_13 Part of the twin-arginine translocation (Tat) system that transports large folded proteins containing a characteristic twin-arginine motif in their signal peptide across membranes K03118 - - 0.000000000000000000000000000000000000000000000000000000002848 229.0
DYD1_k127_6219515_14 Plays an important role in DNA replication, recombination and repair. Binds to ssDNA and to an array of partner proteins to recruit them to their sites of action during DNA metabolism K03111 - - 0.000000000000000000000000000000000000000000000000000000323 198.0
DYD1_k127_6219515_15 MotA/TolQ/ExbB proton channel family K03562 - - 0.000000000000000000000000000000000000000000000000000002459 199.0
DYD1_k127_6219515_16 Outer membrane lipoprotein K05807 - - 0.000000000000000000000000000000000000000000001067 179.0
DYD1_k127_6219515_17 Catalyzes the reversible adenylation of nicotinate mononucleotide (NaMN) to nicotinic acid adenine dinucleotide (NaAD) K00969 - 2.7.7.18 0.000000000000000000000000000000000000000032 166.0
DYD1_k127_6219515_18 Biopolymer transport protein ExbD/TolR K03559,K03560 - - 0.000000000000000000000000000000000000003235 150.0
DYD1_k127_6219515_19 OmpA family K03640 - - 0.00000000000000000000000000000000000705 145.0
DYD1_k127_6219515_2 In eubacteria ppGpp (guanosine 3'-diphosphate 5-' diphosphate) is a mediator of the stringent response that coordinates a variety of cellular activities in response to changes in nutritional abundance K00951 - 2.7.6.5 2.636e-284 890.0
DYD1_k127_6219515_20 general secretion pathway protein K02456,K02650,K02679,K08084 - - 0.00000000000000000000000000000002602 139.0
DYD1_k127_6219515_21 TonB C terminal K03832 - - 0.00000000000000000000000000002365 126.0
DYD1_k127_6219515_22 Tetratricopeptide repeat - - - 0.000000000000000000000000006299 121.0
DYD1_k127_6219515_23 Ribosomal-protein-alanine acetyltransferase K03789 GO:0003674,GO:0003824,GO:0004596,GO:0006464,GO:0006473,GO:0006474,GO:0006807,GO:0008080,GO:0008150,GO:0008152,GO:0009987,GO:0010467,GO:0016407,GO:0016410,GO:0016740,GO:0016746,GO:0016747,GO:0019538,GO:0031365,GO:0034212,GO:0036211,GO:0043170,GO:0043412,GO:0043543,GO:0044237,GO:0044238,GO:0044260,GO:0044267,GO:0051604,GO:0071704,GO:1901564 2.3.1.128 0.000000000000000000002289 102.0
DYD1_k127_6219515_24 PFAM Uncharacterised P-loop hydrolase UPF0079 K06925 - - 0.0000000000000000008602 93.0
DYD1_k127_6219515_25 LysM domain - - - 0.000000000000003951 87.0
DYD1_k127_6219515_26 Universal bacterial protein YeaZ K14742 - - 0.00000000000002186 85.0
DYD1_k127_6219515_27 Cytochrome c assembly protein - - - 0.000000003596 67.0
DYD1_k127_6219515_28 Mediates coordination of peptidoglycan synthesis and outer membrane constriction during cell division - - - 0.00000001664 65.0
DYD1_k127_6219515_3 UDP binding domain K00012 - 1.1.1.22 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001378 580.0
DYD1_k127_6219515_4 UDP binding domain K13015 - 1.1.1.136 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001073 558.0
DYD1_k127_6219515_5 3-beta hydroxysteroid dehydrogenase/isomerase family K01710,K08678 - 4.1.1.35,4.2.1.46 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008289 477.0
DYD1_k127_6219515_6 involved in the assembly of lipopolysaccharide (LPS) at the surface of the outer membrane - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008948 462.0
DYD1_k127_6219515_7 3-beta hydroxysteroid dehydrogenase/isomerase family K01784 - 5.1.3.2 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009043 345.0
DYD1_k127_6219515_8 Catalyzes the NADPH-dependent reduction of glutamyl- tRNA(Glu) to glutamate 1-semialdehyde (GSA) K02492 - 1.2.1.70 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002047 317.0
DYD1_k127_6219515_9 WD40-like Beta Propeller Repeat K03641 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000848 292.0
DYD1_k127_6219534_0 Belongs to the formate--tetrahydrofolate ligase family K01938 - 6.3.4.3 3.736e-217 688.0
DYD1_k127_6219534_1 Hydrolase, TatD family K03424 GO:0003674,GO:0003824,GO:0004518,GO:0004536,GO:0006139,GO:0006259,GO:0006308,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0009056,GO:0009057,GO:0009987,GO:0016787,GO:0016788,GO:0019439,GO:0034641,GO:0034655,GO:0043170,GO:0044237,GO:0044238,GO:0044248,GO:0044260,GO:0044265,GO:0044270,GO:0046483,GO:0046700,GO:0071704,GO:0090304,GO:0090305,GO:0140097,GO:1901360,GO:1901361,GO:1901575 - 0.00000000000000000000000000000000000000000000000000000000002245 214.0
DYD1_k127_6219534_2 Diacylglycerol kinase catalytic domain - - - 0.00000000000000000000000000000000000000000003011 173.0
DYD1_k127_6219534_3 endoribonuclease L-PSP K09022 - 3.5.99.10 0.0000000000000000000000000000000000000013 151.0
DYD1_k127_6219534_4 - - - - 0.0000000000008529 76.0
DYD1_k127_6220987_0 Protein of unknown function (DUF1624) - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001651 518.0
DYD1_k127_6220987_1 Histidine kinase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001671 377.0
DYD1_k127_6220987_2 PFAM aldo keto reductase K06221 - 1.1.1.346 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000584 348.0
DYD1_k127_6220987_3 Ankyrin repeats (3 copies) - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008346 329.0
DYD1_k127_6220987_4 Response regulator receiver K02477 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000141 265.0
DYD1_k127_6220987_5 Di-haem oxidoreductase, putative peroxidase - - - 0.000000000000000000000000000000000000000000000000000000000001894 231.0
DYD1_k127_6220987_6 lactoylglutathione lyase activity - - - 0.000000000000000000000000000000000000000003503 159.0
DYD1_k127_6220987_7 - - - - 0.0000000000000006474 81.0
DYD1_k127_6220987_8 bacterial-type RNA polymerase transcription factor activity, metal ion regulated sequence-specific DNA binding - - - 0.00000003619 60.0
DYD1_k127_6226398_0 amino acids such as threonine, to avoid such errors, it has a posttransfer editing activity that hydrolyzes mischarged Thr-tRNA(Val) in a tRNA-dependent manner K01873 - 6.1.1.9 7.525e-201 636.0
DYD1_k127_6253061_0 NUDIX domain K01515 - 3.6.1.13 0.00000000000000000000000009126 108.0
DYD1_k127_6253061_1 Lactonase, 7-bladed beta-propeller K07404 - 3.1.1.31 0.000001734 60.0
DYD1_k127_6253061_2 6-phosphogluconolactonase activity - - - 0.00002072 49.0
DYD1_k127_6269442_0 fumarate reductase, flavoprotein subunit K00239 - 1.3.5.1,1.3.5.4 0.0 1045.0
DYD1_k127_6269442_1 Alcohol dehydrogenase GroES-like domain K13953 - 1.1.1.1 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002439 494.0
DYD1_k127_6269442_10 Methyltransferase domain - - - 0.00000000000000000000000000000000000000000007555 168.0
DYD1_k127_6269442_11 S4 RNA-binding domain K04762 - - 0.000000000000000000000000000202 118.0
DYD1_k127_6269442_13 Putative adhesin - - - 0.00000000001454 77.0
DYD1_k127_6269442_14 Putative zinc-finger - - - 0.000002431 57.0
DYD1_k127_6269442_2 TIGRFAM succinate dehydrogenase and fumarate reductase iron-sulfur protein K00240,K00245 - 1.3.5.1,1.3.5.4 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000243 381.0
DYD1_k127_6269442_3 Mn2 and Fe2 transporters of the NRAMP family - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001558 328.0
DYD1_k127_6269442_4 Protein of unknown function DUF72 - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000005313 278.0
DYD1_k127_6269442_5 - K00241 - - 0.000000000000000000000000000000000000000000000000000000000000000000003807 242.0
DYD1_k127_6269442_6 DNA-templated transcription, initiation K03088 - - 0.000000000000000000000000000000000000000000000000000000000000000001571 235.0
DYD1_k127_6269442_7 COG0515 Serine threonine protein K12132 - 2.7.11.1 0.000000000000000000000000000000000000000000000000000000000000002877 231.0
DYD1_k127_6269442_8 Prokaryotic glutathione synthetase, ATP-grasp domain - - - 0.000000000000000000000000000000000000000000000000000000000002208 222.0
DYD1_k127_6269442_9 Sigma-70 region 2 K03088 - - 0.00000000000000000000000000000000000000000000000756 177.0
DYD1_k127_6270911_0 Cytochrome c - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001658 576.0
DYD1_k127_6270911_1 D-amino-acid K18482 GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006082,GO:0006520,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0008153,GO:0008652,GO:0009058,GO:0009072,GO:0009073,GO:0009507,GO:0009532,GO:0009536,GO:0009570,GO:0009987,GO:0016053,GO:0019438,GO:0019752,GO:0032787,GO:0042537,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0043436,GO:0044237,GO:0044238,GO:0044249,GO:0044281,GO:0044283,GO:0044422,GO:0044424,GO:0044434,GO:0044435,GO:0044444,GO:0044446,GO:0044464,GO:0046394,GO:0046482,GO:0071704,GO:0072330,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576 4.1.3.38 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005968 308.0
DYD1_k127_6270911_2 Lytic transglycosylase catalytic - - - 0.00000000000000000000000000000000004997 146.0
DYD1_k127_6270911_3 histidine kinase A domain protein - - - 0.00000000002797 71.0
DYD1_k127_6291063_0 Xanthine dehydrogenase K03520 - 1.2.5.3 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001411 544.0
DYD1_k127_6293723_0 response regulator K02481,K07713 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000004324 283.0
DYD1_k127_6293723_1 Bacterial extracellular solute-binding proteins, family 5 Middle K13893 - - 0.00000000000000000000000000000000000000000000000000000000000002467 239.0
DYD1_k127_6293723_2 Bacterial extracellular solute-binding proteins, family 5 Middle K13893 - - 0.00000000000000000000005125 102.0
DYD1_k127_631562_0 Protein of unknown function, DUF255 K06888 - - 0.00000000000000000000000000000000000000000000000000000005707 204.0
DYD1_k127_631562_1 Matrixin - - - 0.0000000000000000000000001807 115.0
DYD1_k127_6325019_0 Protein kinase domain K12132 - 2.7.11.1 3.627e-213 692.0
DYD1_k127_6325019_1 Histone deacetylase domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000162 309.0
DYD1_k127_6325019_2 A type II topoisomerase that negatively supercoils closed circular double-stranded (ds) DNA in an ATP-dependent manner to modulate DNA topology and maintain chromosomes in an underwound state. Negative supercoiling favors strand separation, and DNA replication, transcription, recombination and repair, all of which involve strand separation. Also able to catalyze the interconversion of other topological isomers of dsDNA rings, including catenanes and knotted rings. Type II topoisomerases break and join 2 DNA strands simultaneously in an ATP-dependent manner K02470 - 5.99.1.3 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000006638 298.0
DYD1_k127_6325019_3 OmpA family - - - 0.00000000000000000000000000000000000000003009 160.0
DYD1_k127_6334180_0 NAD+ synthase (glutamine-hydrolyzing) activity K01916 GO:0003674,GO:0003824,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006139,GO:0006725,GO:0006732,GO:0006733,GO:0006753,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0008795,GO:0009058,GO:0009108,GO:0009117,GO:0009165,GO:0009435,GO:0009987,GO:0016874,GO:0016879,GO:0016880,GO:0018130,GO:0019359,GO:0019362,GO:0019363,GO:0019438,GO:0019637,GO:0019674,GO:0034641,GO:0034654,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0044424,GO:0044464,GO:0046483,GO:0046496,GO:0051186,GO:0051188,GO:0055086,GO:0071704,GO:0072524,GO:0072525,GO:0090407,GO:1901293,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576 6.3.1.5 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002532 381.0
DYD1_k127_6334180_1 FES K03575 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000014 268.0
DYD1_k127_6334180_2 ABC transporter K02065 - - 0.0000000000000000000000000000000000000000000000000000000002849 220.0
DYD1_k127_6334180_3 Permease MlaE K02066 - - 0.00000000000000000000000000000000000000000000000000000002123 211.0
DYD1_k127_6334180_4 Thioesterase superfamily - - - 0.00000000000000000000000000000000000000000000000005608 195.0
DYD1_k127_6334180_5 4Fe-4S single cluster domain K07001 - - 0.0000000000000000000000000000249 133.0
DYD1_k127_6334180_6 Uncharacterized conserved protein (DUF2203) - - - 0.00000000000000000000000000022 118.0
DYD1_k127_6334180_7 Uncharacterised protein family (UPF0093) - - - 0.00007719 51.0
DYD1_k127_634830_0 Involved in mRNA degradation. Catalyzes the phosphorolysis of single-stranded polyribonucleotides processively in the 3'- to 5'-direction K00962 - 2.7.7.8 3.598e-286 895.0
DYD1_k127_634830_1 Hsp70 protein K03569 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001218 573.0
DYD1_k127_634830_10 zinc metalloprotease K11749 - - 0.0000000000000000000000000000000000000000000000000000000000000000000003024 255.0
DYD1_k127_634830_11 Associates with the EF-Tu.GDP complex and induces the exchange of GDP to GTP. It remains bound to the aminoacyl-tRNA.EF- Tu.GTP complex up to the GTP hydrolysis stage on the ribosome K02357 GO:0003674,GO:0003676,GO:0003723,GO:0003746,GO:0005488,GO:0006412,GO:0006414,GO:0006518,GO:0006807,GO:0008135,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0019538,GO:0034641,GO:0034645,GO:0043043,GO:0043170,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0071704,GO:0097159,GO:1901363,GO:1901564,GO:1901566,GO:1901576 - 0.0000000000000000000000000000000000000000000000000000000000000000000008115 241.0
DYD1_k127_634830_12 Protein kinase domain K12132 - 2.7.11.1 0.000000000000000000000000000000000000000000000000000000000000000000001477 244.0
DYD1_k127_634830_13 This protein is one of the early assembly proteins of the 50S ribosomal subunit, although it is not seen to bind rRNA by itself. It is important during the early stages of 50S assembly K02871 - - 0.0000000000000000000000000000000000000000000000000000001105 214.0
DYD1_k127_634830_14 Responsible for the release of ribosomes from messenger RNA at the termination of protein biosynthesis. May increase the efficiency of translation by recycling ribosomes from one round of translation to another K02838 - - 0.0000000000000000000000000000000000000000000000000000008122 211.0
DYD1_k127_634830_15 Ribosomal protein S9/S16 K02996 - - 0.000000000000000000000000000000000000000000000000002742 189.0
DYD1_k127_634830_16 Cytidylyltransferase family K00981 - 2.7.7.41 0.00000000000000000000000000000000000000000000000001103 193.0
DYD1_k127_634830_17 rod shape-determining protein MreC K03570 - - 0.000000000000000000000000000000000000000000000002153 183.0
DYD1_k127_634830_18 Forms an intersubunit bridge (bridge B4) with the 23S rRNA of the 50S subunit in the ribosome K02956 - - 0.00000000000000000000000000000005035 127.0
DYD1_k127_634830_19 Component of the acetyl coenzyme A carboxylase (ACC) complex. Biotin carboxylase (BC) catalyzes the carboxylation of biotin on its carrier protein (BCCP) and then the CO(2) group is transferred by the transcarboxylase to acetyl-CoA to form malonyl- CoA K01963 - 2.1.3.15,6.4.1.2 0.000000000000000000000000000001516 126.0
DYD1_k127_634830_2 Alanine dehydrogenase/PNT, N-terminal domain K00259 - 1.4.1.1 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003047 550.0
DYD1_k127_634830_20 Biotin-requiring enzyme - - - 0.000000000000000000000000000002233 126.0
DYD1_k127_634830_21 rod shape-determining protein MreD K03571 - - 0.0000000000000000000000000001466 122.0
DYD1_k127_634830_3 Penicillin-binding Protein dimerisation domain K05515 - 3.4.16.4 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001119 529.0
DYD1_k127_634830_4 Catalyzes the NADP-dependent rearrangement and reduction of 1-deoxy-D-xylulose-5-phosphate (DXP) to 2-C-methyl-D-erythritol 4-phosphate (MEP) K00099 - 1.1.1.267 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002168 466.0
DYD1_k127_634830_5 Insulinase (Peptidase family M16) - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000277 440.0
DYD1_k127_634830_6 Cell cycle protein K05837 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002629 436.0
DYD1_k127_634830_7 Ribosomal protein S2 K02967 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000524 344.0
DYD1_k127_634830_8 Catalyzes the reversible phosphorylation of UMP to UDP K09903 - 2.7.4.22 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003355 309.0
DYD1_k127_634830_9 tRNA (Uracil-5-)-methyltransferase K03215 - 2.1.1.190 0.00000000000000000000000000000000000000000000000000000000000000000000000000000003523 283.0
DYD1_k127_6349037_0 cellulose binding - - - 5.354e-201 630.0
DYD1_k127_6349037_1 6-O-methylguanine DNA methyltransferase, DNA binding domain K10778 - 2.1.1.63 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000835 309.0
DYD1_k127_6349037_2 Protein of unknown function (DUF1428) - - - 0.00000000000000000000000000000000000000000000001895 179.0
DYD1_k127_6349037_3 YCII-related domain - - - 0.00000000000000000000000000000000000000000006726 162.0
DYD1_k127_6370841_0 Synthesizes selenophosphate from selenide and ATP K01008 - 2.7.9.3 0.00000000000000000000000000000000000000000000000001028 183.0
DYD1_k127_6370841_1 - - - - 0.000000000000000000000002273 111.0
DYD1_k127_6424942_0 ATP binding to DnaK triggers the release of the substrate protein, thus completing the reaction cycle. Several rounds of ATP-dependent interactions between DnaJ, DnaK and GrpE are required for fully efficient folding. Also involved, together with DnaK and GrpE, in the DNA replication of plasmids through activation of initiation proteins K03686 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001109 412.0
DYD1_k127_6424942_1 Negative regulator of class I heat shock genes (grpE- dnaK-dnaJ and groELS operons). Prevents heat-shock induction of these operons K03705 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005311 338.0
DYD1_k127_6424942_2 HlyD family secretion protein - - - 0.00000000000000000000000000000000000000000007986 180.0
DYD1_k127_6425102_0 Amidohydrolase family - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008897 351.0
DYD1_k127_6425102_1 Trypsin-like peptidase domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008356 350.0
DYD1_k127_6425102_2 Zinc carboxypeptidase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001508 309.0
DYD1_k127_6425102_3 Leishmanolysin - - - 0.00000000000000000000000000000000000000000000000000000000000000000007989 246.0
DYD1_k127_6425102_4 Involved in the cellular defense against the biological effects of O6-methylguanine (O6-MeG) and O4-methylthymine (O4-MeT) in DNA. Repairs the methylated nucleobase in DNA by stoichiometrically transferring the methyl group to a cysteine residue in the enzyme. This is a suicide reaction the enzyme is irreversibly inactivated K10778 - 2.1.1.63 0.000000000000000000000000000000000000000000000000000000000000007697 221.0
DYD1_k127_6425102_5 lipolytic protein G-D-S-L family - - - 0.000000000000000000000000000000000001254 149.0
DYD1_k127_6425102_6 FHA domain - - - 0.00000000000000000000000000001633 137.0
DYD1_k127_6425102_7 YCII-related domain - - - 0.00000000000002835 79.0
DYD1_k127_6435147_0 (ABC) transporter K06147,K11085 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000181 446.0
DYD1_k127_6435147_1 A helicase nuclease that prepares dsDNA breaks (DSB) for recombinational DNA repair. Binds to DSBs and unwinds DNA via a highly rapid and processive ATP-dependent bidirectional helicase activity. Unwinds dsDNA until it encounters a Chi (crossover hotspot instigator) sequence from the 3' direction. Cuts ssDNA a few nucleotides 3' to the Chi site. The properties and activities of the enzyme are changed at Chi. The Chi-altered holoenzyme produces a long 3'-ssDNA overhang and facilitates RecA-binding to the ssDNA for homologous DNA recombination and repair. Holoenzyme degrades any linearized DNA that is unable to undergo homologous recombination. In the holoenzyme this subunit contributes ATPase, 3'-5' helicase, exonuclease activity and loads RecA onto ssDNA K03582,K16898 - 3.1.11.5,3.6.4.12 0.000000000000000000000000000000000000000000000000000000000000000000000000759 280.0
DYD1_k127_6435147_2 exonuclease activity K16899 - 3.6.4.12 0.000000000000000000000001729 118.0
DYD1_k127_6435147_3 Domain of unknown function (DUF1854) - - - 0.000000000004475 73.0
DYD1_k127_6435147_4 Protein of unknown function, DUF481 K07283 - - 0.000001487 60.0
DYD1_k127_6458106_0 AMIN domain K02666 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000449 482.0
DYD1_k127_6458106_1 Type IV pilus assembly protein PilM; K02662 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005548 429.0
DYD1_k127_6458106_2 amine dehydrogenase activity - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000008561 305.0
DYD1_k127_6458106_3 - - - - 0.00000000000000000000000000000000000001139 157.0
DYD1_k127_6458106_4 Fimbrial assembly protein (PilN) - - - 0.000000000000000000000000000001349 130.0
DYD1_k127_6458106_5 amine dehydrogenase activity - - - 0.000000000000000000000000003091 129.0
DYD1_k127_6458106_6 Pilus assembly protein, PilO K02664 - - 0.0000000000000000000000002381 113.0
DYD1_k127_6458106_7 - - - - 0.000000000000000004787 96.0
DYD1_k127_6503313_0 Helix-hairpin-helix motif K14162 - 2.7.7.7 3.275e-305 974.0
DYD1_k127_6503313_1 Domain of unknown function (DUF3471) K06889 - - 0.00000000000000000000000000000000000000000000000000000000000000023 247.0
DYD1_k127_6503313_10 methylamine metabolic process K15977 - - 0.000000000000000000000003786 114.0
DYD1_k127_6503313_11 helix_turn_helix, Arsenical Resistance Operon Repressor - - - 0.00000000000000000000002607 102.0
DYD1_k127_6503313_12 Plasmid stabilization system - - - 0.0000000000000000001127 91.0
DYD1_k127_6503313_13 RelE-like toxin of type II toxin-antitoxin system HigB K07334 - - 0.000000000000000139 83.0
DYD1_k127_6503313_14 Methyltransferase domain - - - 0.000000000000007811 79.0
DYD1_k127_6503313_16 glyoxalase - - - 0.000000002886 62.0
DYD1_k127_6503313_18 SdpI/YhfL protein family - - - 0.00000006509 66.0
DYD1_k127_6503313_19 - - - - 0.0000008634 59.0
DYD1_k127_6503313_2 Belongs to the 'phage' integrase family - - - 0.00000000000000000000000000000000000000000000000000000000000001715 226.0
DYD1_k127_6503313_3 Belongs to the 'phage' integrase family - - - 0.000000000000000000000000000000000000000000000000000003656 195.0
DYD1_k127_6503313_4 Poorly processive, error-prone DNA polymerase involved in untargeted mutagenesis. Copies undamaged DNA at stalled replication forks, which arise in vivo from mismatched or misaligned primer ends. These misaligned primers can be extended by PolIV. Exhibits no 3'-5' exonuclease (proofreading) activity. May be involved in translesional synthesis, in conjunction with the beta clamp from PolIII K14161 - - 0.00000000000000000000000000000000000000000000001476 190.0
DYD1_k127_6503313_5 TIGRFAM addiction module antidote protein, HigA family K21498 - - 0.000000000000000000000000000000000000000000001733 169.0
DYD1_k127_6503313_6 Methyltransferase domain - - - 0.00000000000000000000000000000000000000000000214 170.0
DYD1_k127_6503313_7 - - - - 0.00000000000000000000000000000000000001498 150.0
DYD1_k127_6503313_8 helix_turn_helix multiple antibiotic resistance protein - - - 0.000000000000000000000000000000000004675 143.0
DYD1_k127_6503313_9 Doxx family - - - 0.000000000000000000000000000000001835 136.0
DYD1_k127_652109_0 Belongs to the dCTP deaminase family K01494 - 3.5.4.13 0.00000000000000000000000000000000000002543 143.0
DYD1_k127_652109_2 Yip1 domain - - - 0.0000000632 63.0
DYD1_k127_6527523_0 Branched-chain amino acid ATP-binding cassette transporter - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001262 594.0
DYD1_k127_6527523_1 Branched-chain amino acid transport K01996 - - 0.0000000000000000000000000000002959 139.0
DYD1_k127_6553586_0 ADP-ribosylation factor family K06883 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000269 377.0
DYD1_k127_6553586_1 May play a role in DNA repair. It seems to be involved in an RecBC-independent recombinational process of DNA repair. It may act with RecF and RecO K06187 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000159 258.0
DYD1_k127_6553586_2 Competence-damaged protein K03742 - 3.5.1.42 0.000000000000000000000000000000000000000000000000000000000000000000000001146 255.0
DYD1_k127_6553586_3 Roadblock/LC7 domain - - - 0.000000000000000000000000000000000000000000000000000001359 199.0
DYD1_k127_6553586_4 CDP-alcohol phosphatidyltransferase K00995 - 2.7.8.5 0.0000000000000000000000000000000000000000000000004147 183.0
DYD1_k127_6553586_5 - - - - 0.000000000000000434 81.0
DYD1_k127_6562413_0 Domain of unknown function (DUF5117) - - - 0.0 1031.0
DYD1_k127_6562413_1 protein import - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005441 620.0
DYD1_k127_6562413_2 Belongs to the Glu Leu Phe Val dehydrogenases family K00261 - 1.4.1.3 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001517 495.0
DYD1_k127_6562413_3 Catalyzes the 6-electron oxidation of protoporphyrinogen-IX to form protoporphyrin-IX K00231 - 1.3.3.15,1.3.3.4 0.00000000000000000000000000000000000000000000000000000004427 203.0
DYD1_k127_6562413_4 Isoquinoline 1-oxidoreductase K07302 - 1.3.99.16 0.0000000615 65.0
DYD1_k127_6614263_0 Produces ATP from ADP in the presence of a proton gradient across the membrane. The alpha chain is a regulatory subunit K02111 - 3.6.3.14 5.185e-242 756.0
DYD1_k127_6614263_1 helix_turn_helix gluconate operon transcriptional repressor K00375 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003067 518.0
DYD1_k127_6614263_11 YCII-related domain - - - 0.0000000002855 64.0
DYD1_k127_6614263_12 - - - - 0.00000003902 57.0
DYD1_k127_6614263_13 - - - - 0.00001992 49.0
DYD1_k127_6614263_14 Involved in protein export. Acts as a chaperone by maintaining the newly synthesized protein in an open conformation. Functions as a peptidyl-prolyl cis-trans isomerase K03545 GO:0005575,GO:0005618,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005886,GO:0006950,GO:0007154,GO:0008150,GO:0009267,GO:0009605,GO:0009987,GO:0009991,GO:0016020,GO:0030312,GO:0031667,GO:0031668,GO:0031669,GO:0033554,GO:0042221,GO:0042594,GO:0044424,GO:0044444,GO:0044464,GO:0046677,GO:0050896,GO:0051716,GO:0071496,GO:0071944 - 0.0001193 46.0
DYD1_k127_6614263_2 Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released K03086 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007117 467.0
DYD1_k127_6614263_3 ABC transporter K02065 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005552 318.0
DYD1_k127_6614263_4 Permease MlaE K02066 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000006151 289.0
DYD1_k127_6614263_5 Produces ATP from ADP in the presence of a proton gradient across the membrane. The gamma chain is believed to be important in regulating ATPase activity and the flow of protons through the CF(0) complex K02115 - - 0.0000000000000000000000000000000000000000000000000000000000000000002927 235.0
DYD1_k127_6614263_6 MlaD protein K02067 - - 0.0000000000000000000000000000000000000000000000000000000000003961 227.0
DYD1_k127_6614263_7 NUDIX domain - - - 0.00000000000000000000000000000000000000000000001749 176.0
DYD1_k127_6614263_8 Helix-turn-helix domain - - - 0.000000000000000000000000000000000000009122 158.0
DYD1_k127_6614263_9 Carboxypeptidase regulatory-like domain K02014 - - 0.0000000000000000002639 100.0
DYD1_k127_6614843_0 TOBE domain K10112 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008394 374.0
DYD1_k127_6614843_1 Destroys radicals which are normally produced within the cells and which are toxic to biological systems K04564 - 1.15.1.1 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005887 321.0
DYD1_k127_6614843_2 PFAM binding-protein-dependent transport systems inner membrane component K02025,K17242 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000001139 305.0
DYD1_k127_6614843_3 Acetyltransferase (GNAT) domain - - - 0.00000000000000000000000000000000000000000000000000000000009341 209.0
DYD1_k127_6614843_4 cyclopropane-fatty-acyl-phospholipid synthase - - - 0.000000000000000000000000000000000004003 145.0
DYD1_k127_6614843_5 DinB family - - - 0.0000000000000000000001067 106.0
DYD1_k127_6614843_6 - - - - 0.000000000000001345 84.0
DYD1_k127_6614843_7 - - - - 0.00000000000001752 76.0
DYD1_k127_6614843_8 Uncharacterized protein conserved in bacteria (DUF2255) - - - 0.00000000000009223 78.0
DYD1_k127_6622540_0 2OG-Fe(II) oxygenase superfamily - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006128 312.0
DYD1_k127_6622540_1 alginic acid biosynthetic process K01729 - 4.2.2.3 0.0000000000000000000000000000000000000000000000000000000000000000000000000003134 282.0
DYD1_k127_6622540_2 Glycosyl transferase, family 2 - - - 0.0000000000000000000000000000000000000000000000000000000000000002158 232.0
DYD1_k127_6622540_3 dTDP-4-dehydrorhamnose 3,5-epimerase activity K01790 - 5.1.3.13 0.0000000000000000000000000000000000000000000000000000000002414 209.0
DYD1_k127_6622540_4 MacB-like periplasmic core domain K02004 - - 0.000000000000000000000000004369 112.0
DYD1_k127_6622540_5 Glycosyl transferases group 1 - - - 0.0000000000000007062 91.0
DYD1_k127_6622540_6 Histidine kinase - - - 0.00002471 48.0
DYD1_k127_6632_0 Catalyzes the condensation of the acetyl group of acetyl-CoA with 3-methyl-2-oxobutanoate (2-oxoisovalerate) to form 3-carboxy-3-hydroxy-4-methylpentanoate (2-isopropylmalate) K01649 - 2.3.3.13 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003892 492.0
DYD1_k127_6654801_0 Beta-eliminating lyase K01667 - 4.1.99.1 0.00000000000000000000000000000000000000000000000000000000000000007572 224.0
DYD1_k127_6654801_1 Belongs to the MenA family. Type 1 subfamily - - - 0.00000000000000000000000000000002154 128.0
DYD1_k127_6654801_2 methyltransferase K18846 - 2.1.1.180 0.0000000000000000000001099 101.0
DYD1_k127_6670456_0 A type II topoisomerase that negatively supercoils closed circular double-stranded (ds) DNA in an ATP-dependent manner to modulate DNA topology and maintain chromosomes in an underwound state. Negative supercoiling favors strand separation, and DNA replication, transcription, recombination and repair, all of which involve strand separation. Also able to catalyze the interconversion of other topological isomers of dsDNA rings, including catenanes and knotted rings. Type II topoisomerases break and join 2 DNA strands simultaneously in an ATP-dependent manner K02469 - 5.99.1.3 2.517e-227 732.0
DYD1_k127_6670456_1 lysine 2,3-aminomutase activity K01843 - 5.4.3.2 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005801 321.0
DYD1_k127_6670456_2 ATP-grasp domain K01921 - 6.3.2.4 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000296 306.0
DYD1_k127_6670456_3 ATP-grasp domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000001181 257.0
DYD1_k127_6670456_4 - - - - 0.000000000000000000000000000000000000000000000000001354 209.0
DYD1_k127_6670456_6 OsmC-like protein - - - 0.00000000005356 66.0
DYD1_k127_6670456_7 Putative antitoxin - - - 0.00000002198 61.0
DYD1_k127_6670456_8 PIN domain K18828 - - 0.000001699 55.0
DYD1_k127_6688426_0 Transketolase, pyrimidine binding domain K11381 - 1.2.4.4 5e-324 1004.0
DYD1_k127_6688426_1 3-isopropylmalate dehydratase activity K01681,K01703,K01704,K17749 - 4.2.1.3,4.2.1.33,4.2.1.35 1.809e-237 752.0
DYD1_k127_6688426_10 One of several proteins that assist in the late maturation steps of the functional core of the 30S ribosomal subunit. Helps release RbfA from mature subunits. May play a role in the assembly of ribosomal proteins into the subunit. Circularly permuted GTPase that catalyzes slow GTP hydrolysis, GTPase activity is stimulated by the 30S ribosomal subunit K06949 - 3.1.3.100 0.00000000000000000000000000000000000000000000000000000000000000000001924 248.0
DYD1_k127_6688426_11 chlorophyll binding - - - 0.00000000000000000000000000000000000000000000000000000000000000001062 242.0
DYD1_k127_6688426_12 Protein of unknown function (DUF1015) - - - 0.000000000000000000000000000000000000000000000000000002561 213.0
DYD1_k127_6688426_13 - - - - 0.0000000000000000000000000000000000000000000000001404 192.0
DYD1_k127_6688426_14 Bacterial capsule synthesis protein PGA_cap K07282 - - 0.00000000000000000000000000000000000000000002587 171.0
DYD1_k127_6688426_15 pilus organization K07004 - - 0.000000000000000000000000000000000002644 151.0
DYD1_k127_6688426_16 HNH nucleases - - - 0.00000000000000000000000001337 117.0
DYD1_k127_6688426_17 Methyltransferase domain - - - 0.000000000000000007519 90.0
DYD1_k127_6688426_18 Bacterial regulatory proteins, tetR family K09017 - - 0.00000000000002504 81.0
DYD1_k127_6688426_19 - - - - 0.00000000000004535 75.0
DYD1_k127_6688426_2 ATP-dependent serine protease that mediates the selective degradation of mutant and abnormal proteins as well as certain short-lived regulatory proteins. Required for cellular homeostasis and for survival from DNA damage and developmental changes induced by stress. Degrades polypeptides processively to yield small peptide fragments that are 5 to 10 amino acids long. Binds to DNA in a double-stranded, site-specific manner K01338 - 3.4.21.53 4.997e-221 711.0
DYD1_k127_6688426_20 - - - - 0.00000000000439 73.0
DYD1_k127_6688426_21 Sugar-specific transcriptional regulator TrmB - - - 0.0000007324 60.0
DYD1_k127_6688426_3 Enoyl-CoA hydratase isomerase K01782 - 1.1.1.35,4.2.1.17,5.1.2.3 6.272e-208 671.0
DYD1_k127_6688426_4 Thiolase, C-terminal domain K00632 - 2.3.1.16 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003857 552.0
DYD1_k127_6688426_5 Belongs to the deoxyhypusine synthase family K00809 - 2.5.1.46 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002628 482.0
DYD1_k127_6688426_6 Serine/Threonine protein kinases, catalytic domain K12132 - 2.7.11.1 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006226 396.0
DYD1_k127_6688426_7 Proline dehydrogenase K00318 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007498 334.0
DYD1_k127_6688426_8 Putative glycosyl hydrolase domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000941 278.0
DYD1_k127_6688426_9 Catalyzes the conversion of epoxyqueuosine (oQ) to queuosine (Q), which is a hypermodified base found in the wobble positions of tRNA(Asp), tRNA(Asn), tRNA(His) and tRNA(Tyr) K18979 - 1.17.99.6 0.00000000000000000000000000000000000000000000000000000000000000000001472 248.0
DYD1_k127_6716182_0 lysine biosynthetic process via aminoadipic acid - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001306 596.0
DYD1_k127_6716182_1 Xylose isomerase-like TIM barrel - - - 0.0000000000000000007532 89.0
DYD1_k127_6724567_0 - - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008802 460.0
DYD1_k127_6724567_1 Thioesterase-like superfamily K07107 - - 0.0000000000000000000000000000000000003516 145.0
DYD1_k127_6724567_2 Bacterial Ig-like domain 2 - - - 0.0000000000000000001301 98.0
DYD1_k127_6724567_3 thiolester hydrolase activity K06889 - - 0.000002617 53.0
DYD1_k127_6728109_0 Lytic transglycosylase catalytic K08307 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000003899 295.0
DYD1_k127_6728109_1 DNA polymerase III, delta subunit K02341 - 2.7.7.7 0.000000000000000000000000000000000000000000000000000000000001314 222.0
DYD1_k127_6728109_2 Catalyzes the conversion of (8S)-3',8-cyclo-7,8- dihydroguanosine 5'-triphosphate to cyclic pyranopterin monophosphate (cPMP) K03637 - 4.6.1.17 0.000000000000000000000000000000000000000000000004523 176.0
DYD1_k127_6728109_3 Transglycosylase SLT domain - - - 0.0000000000000000000000000000000000003723 148.0
DYD1_k127_6729999_0 - - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006015 523.0
DYD1_k127_6729999_1 HELICc2 K03722 - 3.6.4.12 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007361 537.0
DYD1_k127_6729999_2 Aminotransferase class I and II K10206 - 2.6.1.83 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001975 390.0
DYD1_k127_6729999_3 ATPase domain of DNA mismatch repair MUTS family - - - 0.00000000000000000000000000000000000000000000000000000000003446 222.0
DYD1_k127_6729999_4 TIGRFAM HAD-superfamily hydrolase, subfamily IA, variant 1 K07025 - - 0.00000000000000000000000000000000000000001862 162.0
DYD1_k127_6729999_5 Transglycosylase associated protein - - - 0.0000000000000000000000001035 114.0
DYD1_k127_6729999_6 COGs COG2929 conserved K09803 - - 0.00000000000000000001342 93.0
DYD1_k127_6729999_7 - - - - 0.00000000005363 74.0
DYD1_k127_6729999_8 - - - - 0.00000005622 55.0
DYD1_k127_6740473_0 ATPase P-type (Transporting), HAD superfamily, subfamily IC K01535,K01537 - 3.6.3.6,3.6.3.8 8.479e-313 979.0
DYD1_k127_6740473_1 Catalyzes the cleavage of L-kynurenine (L-Kyn) and L-3- hydroxykynurenine (L-3OHKyn) into anthranilic acid (AA) and 3- hydroxyanthranilic acid (3-OHAA), respectively K01556 - 3.7.1.3 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001982 509.0
DYD1_k127_6740473_10 Copper binding proteins, plastocyanin/azurin family - - - 0.000000000000000000000000000000000000000000005417 178.0
DYD1_k127_6740473_11 COG4635 Flavodoxin K00230 - 1.3.5.3 0.0000000000000000000000000000000000000000000408 168.0
DYD1_k127_6740473_12 - - - - 0.0000000000000000000000000000000000000000001511 165.0
DYD1_k127_6740473_14 Catalyzes the hydrolysis of N-formyl-L-kynurenine to L- kynurenine, the second step in the kynurenine pathway of tryptophan degradation K07130 GO:0003674,GO:0003824,GO:0004061,GO:0005488,GO:0006082,GO:0006520,GO:0006568,GO:0006569,GO:0006576,GO:0006586,GO:0006725,GO:0006766,GO:0006767,GO:0006807,GO:0008150,GO:0008152,GO:0008270,GO:0009056,GO:0009063,GO:0009072,GO:0009074,GO:0009308,GO:0009310,GO:0009987,GO:0016054,GO:0016787,GO:0016810,GO:0016811,GO:0019439,GO:0019441,GO:0019752,GO:0032787,GO:0034641,GO:0042180,GO:0042402,GO:0042430,GO:0042436,GO:0042537,GO:0043167,GO:0043169,GO:0043420,GO:0043436,GO:0044106,GO:0044237,GO:0044238,GO:0044248,GO:0044270,GO:0044281,GO:0044282,GO:0046218,GO:0046395,GO:0046483,GO:0046700,GO:0046872,GO:0046914,GO:0070189,GO:0071704,GO:1901360,GO:1901361,GO:1901564,GO:1901565,GO:1901575,GO:1901605,GO:1901606 3.5.1.9 0.000000000000000000000001234 109.0
DYD1_k127_6740473_15 - - - - 0.000000000000001244 86.0
DYD1_k127_6740473_16 Belongs to the universal stress protein A family - - - 0.00000000000001329 86.0
DYD1_k127_6740473_17 - - - - 0.0000000002117 69.0
DYD1_k127_6740473_18 Transcriptional regulator - - - 0.0000000004976 68.0
DYD1_k127_6740473_2 Amidohydrolase K03392 - 4.1.1.45 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006234 490.0
DYD1_k127_6740473_3 COG0654 2-polyprenyl-6-methoxyphenol hydroxylase and related FAD-dependent oxidoreductases K00486 GO:0003674,GO:0003824,GO:0004497,GO:0008150,GO:0008152,GO:0009058,GO:0016491,GO:0019748,GO:0044550,GO:0055114 1.14.13.9 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000546 443.0
DYD1_k127_6740473_4 Tryptophan 2,3-dioxygenase K00453 - 1.13.11.11 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007258 344.0
DYD1_k127_6740473_5 Catalyzes the oxidative ring opening of 3- hydroxyanthranilate to 2-amino-3-carboxymuconate semialdehyde, which spontaneously cyclizes to quinolinate K00452 - 1.13.11.6 0.0000000000000000000000000000000000000000000000000000000000000000001092 237.0
DYD1_k127_6740473_6 calcium, potassium:sodium antiporter activity K07301 - - 0.000000000000000000000000000000000000000000000000000000000003087 220.0
DYD1_k127_6740473_7 Catalyzes the opening and hydrolysis of the beta-lactam ring of beta-lactam antibiotics such as penicillins and cephalosporins - - - 0.0000000000000000000000000000000000000000000000000000000005439 212.0
DYD1_k127_6740473_8 Phosphoribosyl transferase domain K07100 - - 0.0000000000000000000000000000000000000000000000000000003993 200.0
DYD1_k127_6740473_9 Belongs to the universal stress protein A family - - - 0.0000000000000000000000000000000000000000000000001055 189.0
DYD1_k127_6744712_0 TonB-dependent receptor K02014,K16087 - - 1.977e-200 644.0
DYD1_k127_6744712_1 Belongs to the alkaline phosphatase family K01077 - 3.1.3.1 0.0000000000000000000000000000000000000000000000000000000000004227 228.0
DYD1_k127_6744712_2 Tfp pilus assembly protein FimV K00694 - 2.4.1.12 0.000000000000000000000000000000000000000000000000001239 202.0
DYD1_k127_6744712_3 - - - - 0.00000000000000000000000000001306 131.0
DYD1_k127_6745965_0 Prevents misfolding and promotes the refolding and proper assembly of unfolded polypeptides generated under stress conditions K04077 - - 1.456e-277 861.0
DYD1_k127_6745965_1 Nicastrin K01301 - 3.4.17.21 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000302 602.0
DYD1_k127_6745965_10 Involved in the gluconeogenesis. Catalyzes stereospecifically the conversion of dihydroxyacetone phosphate (DHAP) to D-glyceraldehyde-3-phosphate (G3P) K01803 - 5.3.1.1 0.00000000000000000000000000000000000000000000000000000000000000000001855 251.0
DYD1_k127_6745965_11 Amidohydrolase family - - - 0.000000000000000000000000000000000000000000000000000000000000001411 239.0
DYD1_k127_6745965_12 Telomere recombination K07566 - 2.7.7.87 0.00000000000000000000000000000000000000000000000000000005363 203.0
DYD1_k127_6745965_13 6-pyruvoyl tetrahydropterin synthase K01737 - 4.1.2.50,4.2.3.12 0.00000000000000000000000000000000000000000000000000002941 190.0
DYD1_k127_6745965_14 Histone-like DNA-binding protein which is capable of wrapping DNA to stabilize it, and thus to prevent its denaturation under extreme environmental conditions K05788 - - 0.00000000000000000000000000000000000000000000002403 173.0
DYD1_k127_6745965_15 - - - - 0.0000000000000000000000000000000000000000000004335 172.0
DYD1_k127_6745965_16 Belongs to the class IV-like SAM-binding methyltransferase superfamily. RNA methyltransferase TrmH family. TrmL subfamily K03216 - 2.1.1.207 0.00000000000000000000000000000000000000000003524 165.0
DYD1_k127_6745965_17 Low molecular weight phosphatase family K01104 - 3.1.3.48 0.000000000000000000000000000000000000000001525 161.0
DYD1_k127_6745965_18 Involved in the biosynthesis of the chorismate, which leads to the biosynthesis of aromatic amino acids. Catalyzes the reversible NADPH linked reduction of 3-dehydroshikimate (DHSA) to yield shikimate (SA) K00014 GO:0000166,GO:0003674,GO:0003824,GO:0004764,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006082,GO:0008150,GO:0008152,GO:0009058,GO:0009423,GO:0009987,GO:0016053,GO:0016491,GO:0016614,GO:0016616,GO:0019632,GO:0019752,GO:0032787,GO:0036094,GO:0043436,GO:0043648,GO:0043650,GO:0044237,GO:0044249,GO:0044281,GO:0044283,GO:0044424,GO:0044444,GO:0044464,GO:0046394,GO:0046417,GO:0048037,GO:0050661,GO:0050662,GO:0055114,GO:0071704,GO:0097159,GO:1901265,GO:1901363,GO:1901576,GO:1901615 1.1.1.25 0.000000000000000000000000000000000000000003184 165.0
DYD1_k127_6745965_19 Catalyzes the formation of 4-diphosphocytidyl-2-C- methyl-D-erythritol from CTP and 2-C-methyl-D-erythritol 4- phosphate (MEP) K00991 - 2.7.7.60 0.000000000000000000000000000000000000003755 158.0
DYD1_k127_6745965_2 COG1228 Imidazolonepropionase and related K01443 - 3.5.1.25 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001203 627.0
DYD1_k127_6745965_20 Binds to Cpn60 in the presence of Mg-ATP and suppresses the ATPase activity of the latter K04078 - - 0.00000000000000000000000000000000000001715 146.0
DYD1_k127_6745965_21 Molybdopterin converting factor subunit K03635,K21142 - 2.8.1.12 0.0000000000000000000000000000001213 128.0
DYD1_k127_6745965_22 NlpC/P60 family - - - 0.000000000000000000000000134 122.0
DYD1_k127_6745965_23 Competence protein - GO:0006139,GO:0006259,GO:0006308,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0009056,GO:0009057,GO:0009987,GO:0015976,GO:0019439,GO:0034641,GO:0034655,GO:0043170,GO:0044237,GO:0044238,GO:0044248,GO:0044260,GO:0044265,GO:0044270,GO:0046483,GO:0046700,GO:0071704,GO:0090304,GO:1901360,GO:1901361,GO:1901575 - 0.0000000000000000001907 102.0
DYD1_k127_6745965_24 Alkylhydroperoxidase AhpD family core domain protein - - - 0.000000000000000002877 88.0
DYD1_k127_6745965_25 Preprotein translocase SecG subunit K03075 - - 0.00000000000000005085 85.0
DYD1_k127_6745965_26 Intracellular proteinase inhibitor - - - 0.0000000000000003635 84.0
DYD1_k127_6745965_27 Carboxymuconolactone decarboxylase family - - - 0.000000000000003747 77.0
DYD1_k127_6745965_28 Transferrin receptor-like dimerisation domain K01301 - 3.4.17.21 0.000003599 53.0
DYD1_k127_6745965_29 MoaE protein - - - 0.00002678 52.0
DYD1_k127_6745965_3 DNA-dependent ATPase involved in processing of recombination intermediates, plays a role in repairing DNA breaks. Stimulates the branch migration of RecA-mediated strand transfer reactions, allowing the 3' invading strand to extend heteroduplex DNA faster. Binds ssDNA in the presence of ADP but not other nucleotides, has ATPase activity that is stimulated by ssDNA and various branched DNA structures, but inhibited by SSB. Does not have RecA's homology-searching function K04485 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004605 529.0
DYD1_k127_6745965_4 Phosphoglycerate kinase K00927 - 2.7.2.3 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006111 496.0
DYD1_k127_6745965_5 Catalyzes the reversible oxidation of malate to oxaloacetate K00024 - 1.1.1.37 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004905 469.0
DYD1_k127_6745965_6 Carbamoyl-phosphate synthase small chain, CPSase domain K01956 - 6.3.5.5 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006 463.0
DYD1_k127_6745965_7 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain K00134 - 1.2.1.12 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003905 463.0
DYD1_k127_6745965_8 Peptidase inhibitor I9 - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007268 447.0
DYD1_k127_6745965_9 amine dehydrogenase activity - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006046 317.0
DYD1_k127_6775972_0 Carbamoyltransferase C-terminus K00612 - - 5.197e-315 972.0
DYD1_k127_6775972_1 polysaccharide deacetylase - - - 0.000000000000000000000000000000000000000000000000000000000000000000002169 248.0
DYD1_k127_6775972_2 ATPase associated with various cellular activities AAA_5 K07478 GO:0005575,GO:0005622,GO:0005623,GO:0005657,GO:0005694,GO:0006139,GO:0006259,GO:0006260,GO:0006261,GO:0006310,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0030894,GO:0032991,GO:0032993,GO:0034641,GO:0034645,GO:0043170,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044422,GO:0044424,GO:0044427,GO:0044446,GO:0044464,GO:0046483,GO:0071704,GO:0090304,GO:1901360,GO:1901576 - 0.00000000000000000000000000000000000000000000000000000000353 204.0
DYD1_k127_6775972_3 - - - - 0.00000000000000000003149 97.0
DYD1_k127_6775972_4 - - - - 0.000000000000006638 75.0
DYD1_k127_6783850_0 Multicopper oxidase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009386 590.0
DYD1_k127_6783850_1 Amidohydrolase family - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003512 434.0
DYD1_k127_6783850_2 PDZ domain (Also known as DHR or GLGF) K08372 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003645 348.0
DYD1_k127_6783850_3 - - - - 0.000000000000000000000004999 108.0
DYD1_k127_6787054_0 Tetratricopeptide repeat - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000001023 277.0
DYD1_k127_6787054_1 catalyzes the demethylation of specific methylglutamate residues introduced into the chemoreceptors (methyl-accepting chemotaxis proteins) by CheR K03412 - 3.1.1.61,3.5.1.44 0.0000000000000000000000000000000000003337 144.0
DYD1_k127_6787054_2 - - - - 0.0000000000000000000000000000000002154 142.0
DYD1_k127_6787054_3 PFAM CheW domain protein K03408 - - 0.0000000000000000000000001467 118.0
DYD1_k127_6787054_4 Two component signalling adaptor domain K03408 - - 0.0001615 51.0
DYD1_k127_6796069_0 Transketolase, pyrimidine binding domain K00167,K11381,K21417 - 1.2.4.4 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005376 499.0
DYD1_k127_6796069_1 The pyruvate dehydrogenase complex catalyzes the overall conversion of pyruvate to acetyl-CoA and CO(2) K00161,K11381,K21416 - 1.2.4.1,1.2.4.4 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006919 425.0
DYD1_k127_68284_0 Prolyl oligopeptidase family - - - 1.032e-274 871.0
DYD1_k127_68284_1 COG0500 SAM-dependent methyltransferases K07755 - 2.1.1.137 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001496 375.0
DYD1_k127_68284_10 Ribosomal protein S21 K02970 - - 0.0000000002855 64.0
DYD1_k127_68284_11 lipolytic protein G-D-S-L family K20306 - - 0.000007908 58.0
DYD1_k127_68284_2 Belongs to the DEAD box helicase family K11927 - 3.6.4.13 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004092 381.0
DYD1_k127_68284_3 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily K15975 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000004939 289.0
DYD1_k127_68284_4 Phospholipase/Carboxylesterase K06999,K15975 - - 0.0000000000000000000000000000000000000000000000000000000000007532 225.0
DYD1_k127_68284_5 Belongs to the low molecular weight phosphotyrosine protein phosphatase family K03741 - 1.20.4.1 0.00000000000000000000000000000000000000000000001122 179.0
DYD1_k127_68284_6 SNARE associated Golgi protein - - - 0.00000000000000000000000000000000000009179 152.0
DYD1_k127_68284_7 Phosphoglycerate mutase family - - - 0.00000000000000000000000000000000008049 141.0
DYD1_k127_68284_8 Cold shock protein domain K03704 - - 0.000000000000000000000000000000001653 130.0
DYD1_k127_68284_9 helix_turn_helix, Arsenical Resistance Operon Repressor K03892 - - 0.0000000000000000000000000000006667 124.0
DYD1_k127_6847365_0 Berberine and berberine like - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005104 594.0
DYD1_k127_6847365_1 transferase activity, transferring glycosyl groups K13693 - 2.4.1.266 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001439 511.0
DYD1_k127_6847365_10 NHL repeat - - - 0.0000002283 63.0
DYD1_k127_6847365_11 alkyl hydroperoxide reductase Thiol specific antioxidant Mal allergen - - - 0.0002032 51.0
DYD1_k127_6847365_2 NmrA-like family - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009578 461.0
DYD1_k127_6847365_3 Belongs to the sodium neurotransmitter symporter (SNF) (TC 2.A.22) family K03308 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003765 403.0
DYD1_k127_6847365_4 Sodium/calcium exchanger protein K07300 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003475 391.0
DYD1_k127_6847365_5 Phage integrase, N-terminal SAM-like domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000001035 309.0
DYD1_k127_6847365_6 Reversible hydration of carbon dioxide K01673 - 4.2.1.1 0.000000000000000000000000000000000000000000000000000000000000000000455 243.0
DYD1_k127_6847365_7 Mannosyl-3-phosphoglycerate phosphatase family K07026 - 3.1.3.70 0.0000000000000000000000000000000000000000002112 171.0
DYD1_k127_6847365_8 PFAM transposase IS3 IS911 family protein K07483 - - 0.00000000000000000000000000000004172 136.0
DYD1_k127_6847365_9 Integrase core domain - - - 0.00000005348 61.0
DYD1_k127_6882880_0 RecQ zinc-binding K03654 - 3.6.4.12 3.617e-207 661.0
DYD1_k127_6885136_0 HD domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001246 341.0
DYD1_k127_6885136_1 Catalyzes the conversion of cyclic dehypoxanthine futalosine (cyclic DHFL) into 1,4-dihydroxy-6-naphthoate, a step in the biosynthesis of menaquinone (MK, vitamin K2) K11785 - - 0.000000000000000000000000000000000000000000000000000000000000000008023 229.0
DYD1_k127_6885136_2 Tfp pilus assembly protein FimT - - - 0.00000000000425 74.0
DYD1_k127_6890513_0 Catalyzes the attachment of glutamate to tRNA(Glu) in a two-step reaction glutamate is first activated by ATP to form Glu-AMP and then transferred to the acceptor end of tRNA(Glu) K01885 - 6.1.1.17 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000889 364.0
DYD1_k127_6890513_1 transcriptional regulator - - - 0.00000000000000000006856 91.0
DYD1_k127_6902899_0 PFAM L-carnitine dehydratase bile acid-inducible protein F K07749 - 2.8.3.16 0.000000000000000000000000000000000000007446 151.0
DYD1_k127_6902899_1 protein secretion - - - 0.00000001388 64.0
DYD1_k127_6909304_0 heavy metal translocating P-type ATPase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003401 599.0
DYD1_k127_6909304_1 - - - - 0.0000000000000000000000000007976 116.0
DYD1_k127_6920362_0 glycosyltransferase 36 associated K00702,K13688 - 2.4.1.20 2.878e-273 847.0
DYD1_k127_692171_0 xanthine dehydrogenase activity K04108 - 1.3.7.9 3.031e-300 942.0
DYD1_k127_692171_1 Membrane dipeptidase (Peptidase family M19) - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004038 441.0
DYD1_k127_692171_2 2Fe-2S -binding domain protein K03518 - 1.2.5.3 0.0000000000000000000000000000000000000000000000000000000000001795 217.0
DYD1_k127_692171_3 xanthine dehydrogenase activity K04109 - 1.3.7.9 0.0000000000000000000000000000000000000000000000003598 186.0
DYD1_k127_692171_4 endoribonuclease L-PSP - - - 0.000000000000000000000000000000000000008521 155.0
DYD1_k127_692171_5 Could be a mediator in iron transactions between iron acquisition and iron-requiring processes, such as synthesis and or repair of Fe-S clusters in biosynthetic enzymes - GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006950,GO:0006979,GO:0008150,GO:0009987,GO:0033554,GO:0034599,GO:0042221,GO:0044424,GO:0044444,GO:0044464,GO:0050896,GO:0051716,GO:0070887 - 0.0000000000000000203 88.0
DYD1_k127_692171_7 - - - - 0.000000001231 69.0
DYD1_k127_6923985_0 Aldehyde dehydrogenase family K00128,K00130,K00135 - 1.2.1.16,1.2.1.20,1.2.1.3,1.2.1.79,1.2.1.8 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004387 501.0
DYD1_k127_6923985_1 Belongs to the thiolase family K00626,K00632 - 2.3.1.16,2.3.1.9 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006786 480.0
DYD1_k127_6923985_10 Phenylacetate-CoA oxygenase K15512 - 1.14.13.208 0.0000000000000000000000000000000000000000000000000000000005921 219.0
DYD1_k127_6923985_11 - - - - 0.00000000000000000000000000000000000000000003078 175.0
DYD1_k127_6923985_12 Protein of unknown function (DUF423) - - - 0.0000000000000000000000000000000000000000001314 166.0
DYD1_k127_6923985_13 Glycerophosphoryl diester phosphodiesterase family K01126 - 3.1.4.46 0.0000000000000000000000000000000000000000001767 179.0
DYD1_k127_6923985_14 Bacterial regulatory proteins, tetR family - - - 0.0000000000000000000000000000000000004067 147.0
DYD1_k127_6923985_15 This protein binds to 23S rRNA in the presence of protein L20 K02888 - - 0.00000000000000000000000000000000001252 138.0
DYD1_k127_6923985_16 Belongs to the bacterial ribosomal protein bL27 family K02899 GO:0003674,GO:0003735,GO:0005198,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0015934,GO:0022625,GO:0022626,GO:0032991,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:1990904 - 0.0000000000000000000000000000000001285 138.0
DYD1_k127_6923985_17 Sigma-70, region 4 K03088 - - 0.0000000000000000000000000000000001739 139.0
DYD1_k127_6923985_18 Acyl-CoA dehydrogenase, C-terminal domain K18244 - - 0.0000122 48.0
DYD1_k127_6923985_2 ribonuclease E activity K08300,K08301 - 3.1.26.12 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004668 394.0
DYD1_k127_6923985_3 Belongs to the enoyl-CoA hydratase isomerase family K01715 - 4.2.1.17 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006072 378.0
DYD1_k127_6923985_4 amidohydrolase K07045 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003877 372.0
DYD1_k127_6923985_5 Similarity to COG0471 Di- and tricarboxylate transporters(Evalue K14445 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008942 378.0
DYD1_k127_6923985_6 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain K00074 - 1.1.1.157 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008641 310.0
DYD1_k127_6923985_7 Belongs to the enoyl-CoA hydratase isomerase family K01715 - 4.2.1.17 0.000000000000000000000000000000000000000000000000000000000000000000000001288 267.0
DYD1_k127_6923985_8 Belongs to the class-IV pyridoxal-phosphate-dependent aminotransferase family K00824 - 2.6.1.21 0.000000000000000000000000000000000000000000000000000000000000000000000002166 256.0
DYD1_k127_6923985_9 Enoyl-CoA hydratase/isomerase K15866 - 5.3.3.18 0.0000000000000000000000000000000000000000000000000000000000000000001275 241.0
DYD1_k127_6937051_0 Amidohydrolase family - - - 0.0 1300.0
DYD1_k127_6937051_1 Amidohydrolase family - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000192 347.0
DYD1_k127_6937051_2 PFAM glycosyl transferase, family 28 K05841 - 2.4.1.173 0.00000000000000000000000000000000000000000000000000000000000000000003151 238.0
DYD1_k127_6937051_3 Lactonase, 7-bladed beta-propeller - - - 0.0000000000000000001915 98.0
DYD1_k127_6937872_0 asparagine synthase K01953,K18316 - 6.3.3.6,6.3.5.4 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000561 409.0
DYD1_k127_6938073_0 Peptidase family M1 domain K01256 - 3.4.11.2 2.316e-248 786.0
DYD1_k127_6952566_0 - - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006826 574.0
DYD1_k127_6952566_1 Protein tyrosine kinase K12132 - 2.7.11.1 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009739 515.0
DYD1_k127_6952566_2 - - - - 0.000000000000000000000000000000000000000000000000000000000000000001559 232.0
DYD1_k127_6952566_3 ECF sigma factor - - - 0.000000000000000000000000000000000000000000000000000000004091 207.0
DYD1_k127_6952566_4 WD40-like Beta Propeller Repeat K03641 - - 0.0000000000000000000000000000000000002152 162.0
DYD1_k127_6952566_5 amino acid activation for nonribosomal peptide biosynthetic process K05996 - 3.4.17.18 0.000000000000000000000000000000000002176 154.0
DYD1_k127_6952566_6 Right handed beta helix region - - - 0.000006003 59.0
DYD1_k127_6952566_7 Transposase IS200 like K07491 - - 0.00002906 52.0
DYD1_k127_6958235_0 amino acids such as valine, to avoid such errors it has two additional distinct tRNA(Ile)-dependent editing activities. One activity is designated as 'pretransfer' editing and involves the hydrolysis of activated Val-AMP. The other activity is designated 'posttransfer' editing and involves deacylation of mischarged Val-tRNA(Ile) K01870 - 6.1.1.5 0.0 1039.0
DYD1_k127_6958235_1 The purine nucleoside phosphorylases catalyze the phosphorolytic breakdown of the N-glycosidic bond in the beta- (deoxy)ribonucleoside molecules, with the formation of the corresponding free purine bases and pentose-1-phosphate K03783 - 2.4.2.1 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004629 373.0
DYD1_k127_6958235_2 Protein of unknown function (DUF2723) - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000005345 309.0
DYD1_k127_6958235_3 Catalyzes the condensation of 2 ATP molecules into cyclic di-AMP (c-di-AMP), a second messenger used to regulate differing processes in different bacteria K18672 - 2.7.7.85 0.00000000000000000000000000000000000000000000000000000000000000000000000000000007197 274.0
DYD1_k127_6958235_4 Pterin binding enzyme K00796,K13941 - 2.5.1.15,2.7.6.3 0.0000000000000000000000000000000000000000000000000000000000000000000000004135 256.0
DYD1_k127_6958235_5 Responsible for synthesis of pseudouridine from uracil K06180 GO:0000154,GO:0000455,GO:0001522,GO:0003674,GO:0003824,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006139,GO:0006364,GO:0006396,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0009451,GO:0009982,GO:0009987,GO:0010467,GO:0016070,GO:0016072,GO:0016853,GO:0016866,GO:0022613,GO:0031118,GO:0034470,GO:0034641,GO:0034660,GO:0042254,GO:0043170,GO:0043412,GO:0044085,GO:0044237,GO:0044238,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0071704,GO:0071840,GO:0090304,GO:1901360 5.4.99.23 0.0000000000000000000000000000000000000000000000000000000000000000002399 246.0
DYD1_k127_6958235_6 Pyridoxal 5'-phosphate (PLP)-binding protein, which is involved in PLP homeostasis K06997 - - 0.0000000000000000000000000000000000000000000000000000000000001809 219.0
DYD1_k127_6958235_7 Prokaryotic dksA/traR C4-type zinc finger - - - 0.0000000000000000000000000000000000000000000000000000000005796 203.0
DYD1_k127_6958235_8 This protein specifically catalyzes the removal of signal peptides from prolipoproteins K03101 - 3.4.23.36 0.000000000000000000000000000000000000008679 153.0
DYD1_k127_6958235_9 Cell division initiation protein K04074 GO:0003674,GO:0005488,GO:0005515,GO:0042802 - 0.000000000001239 79.0
DYD1_k127_6961242_0 Oxidoreductase - - - 1.041e-264 825.0
DYD1_k127_6961242_1 Gluconate 2-dehydrogenase subunit 3 - - - 0.00000000000000000000000000000000000000000000000000000000000004535 220.0
DYD1_k127_6963790_0 Dioxygenase K00449 - 1.13.11.3 0.0000000000000000000000000000000000000000000000002656 179.0
DYD1_k127_6963790_1 YceI-like domain - - - 0.0000000000000000000000000000002488 132.0
DYD1_k127_6999030_0 endonuclease exonuclease phosphatase K07004 - - 0.0000000000000000000000000000000000000000000003716 179.0
DYD1_k127_6999030_1 C-terminal domain of CHU protein family - - - 0.0000000000000000000001355 109.0
DYD1_k127_803372_0 Oxidoreductase family, NAD-binding Rossmann fold - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002622 596.0
DYD1_k127_803372_1 cobalamin-transporting ATPase activity - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002358 531.0
DYD1_k127_803372_2 Amino acid permease - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002194 472.0
DYD1_k127_803372_3 transport - - - 0.00000000000000000000000000000001342 134.0
DYD1_k127_817463_0 heme binding K00463 - 1.13.11.52 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001006 410.0
DYD1_k127_817463_1 TonB-dependent receptor K02014 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005222 337.0
DYD1_k127_839_0 cellulase activity - - - 1.692e-203 659.0
DYD1_k127_839_1 Involved in chlorophyll biosynthesis. Catalyzes the insertion of magnesium ion into protoporphyrin IX to yield Mg- protoporphyrin IX K03405 - 6.6.1.1 1.039e-202 642.0
DYD1_k127_839_2 efflux transmembrane transporter activity - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006519 511.0
DYD1_k127_839_3 Transmembrane secretion effector - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002566 324.0
DYD1_k127_839_4 von Willebrand factor (vWF) type A domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000001014 289.0
DYD1_k127_839_5 Psort location Cytoplasmic, score K00945 - 2.7.4.25 0.0000000000000000000000000000000002102 150.0
DYD1_k127_839_6 Psort location CytoplasmicMembrane, score - - - 0.0000001379 58.0
DYD1_k127_839_7 PFAM Protein kinase domain - - - 0.0006268 50.0
DYD1_k127_854611_0 Belongs to the TPP enzyme family - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005881 539.0
DYD1_k127_854611_1 4-phosphoerythronate dehydrogenase activity K00058 - 1.1.1.399,1.1.1.95 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002025 349.0
DYD1_k127_854611_2 - - - - 0.000002679 51.0
DYD1_k127_865561_0 Tryptophan halogenase K16033 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007181 412.0
DYD1_k127_865561_1 COG1028 Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) K00059 - 1.1.1.100 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000006443 283.0
DYD1_k127_865561_2 Translation initiation inhibitor, yjgF family K15067 - 3.5.99.5 0.00000000000000000000000000000000000000000000001231 186.0
DYD1_k127_865561_3 Catalyzes the hydrolysis of N-formyl-L-kynurenine to L- kynurenine, the second step in the kynurenine pathway of tryptophan degradation K07130 GO:0003674,GO:0003824,GO:0004061,GO:0006082,GO:0006520,GO:0006568,GO:0006569,GO:0006576,GO:0006586,GO:0006725,GO:0006766,GO:0006767,GO:0006807,GO:0008150,GO:0008152,GO:0009056,GO:0009063,GO:0009072,GO:0009074,GO:0009308,GO:0009310,GO:0009987,GO:0016054,GO:0016787,GO:0016810,GO:0016811,GO:0019439,GO:0019441,GO:0019752,GO:0032787,GO:0034641,GO:0042180,GO:0042402,GO:0042430,GO:0042436,GO:0042537,GO:0043420,GO:0043436,GO:0044106,GO:0044237,GO:0044238,GO:0044248,GO:0044270,GO:0044281,GO:0044282,GO:0046218,GO:0046395,GO:0046483,GO:0046700,GO:0070189,GO:0071704,GO:1901360,GO:1901361,GO:1901564,GO:1901565,GO:1901575,GO:1901605,GO:1901606 3.5.1.9 0.000000000000003177 76.0
DYD1_k127_865561_4 Alkyl hydroperoxide reductase Thiol specific antioxidant Mal allergen - - - 0.000000000003708 74.0
DYD1_k127_884618_0 Required for accurate and efficient protein synthesis under certain stress conditions. May act as a fidelity factor of the translation reaction, by catalyzing a one-codon backward translocation of tRNAs on improperly translocated ribosomes. Back- translocation proceeds from a post-translocation (POST) complex to a pre-translocation (PRE) complex, thus giving elongation factor G a second chance to translocate the tRNAs correctly. Binds to ribosomes in a GTP-dependent manner K03596 - - 1.435e-238 752.0
DYD1_k127_884618_1 Cys/Met metabolism PLP-dependent enzyme - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002343 462.0
DYD1_k127_884618_2 ROK family K00845 - 2.7.1.2 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003213 402.0
DYD1_k127_884618_3 Histidine kinase-like ATPases - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008332 340.0
DYD1_k127_884618_4 Catalyzes the phosphorylation of ribose at O-5 in a reaction requiring ATP and magnesium. The resulting D-ribose-5- phosphate can then be used either for sythesis of nucleotides, histidine, and tryptophan, or as a component of the pentose phosphate pathway - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001753 320.0
DYD1_k127_884618_5 ABC transporter K09812 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000001337 278.0
DYD1_k127_884618_6 Part of the ABC transporter FtsEX involved in K09811 - - 0.000000000000000000000000000000000000000000000000000000000000000000000009938 264.0
DYD1_k127_884618_7 peptidase - - - 0.00000000000000000000000000000000000000000000000000000000000000000001623 252.0
DYD1_k127_884618_8 Peptidase family M23 - - - 0.0000000000000000000000000000001463 141.0
DYD1_k127_884618_9 - - - - 0.000000000000000000000000001165 128.0
DYD1_k127_898038_0 hydrolase activity, hydrolyzing O-glycosyl compounds K16147 - 2.4.99.16 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001038 502.0
DYD1_k127_902754_0 abc transporter atp-binding protein K06147 - - 9.431e-222 704.0
DYD1_k127_902754_1 PFAM amidohydrolase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009176 591.0
DYD1_k127_902754_10 FAD linked oxidases, C-terminal domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001361 377.0
DYD1_k127_902754_11 Dehydrogenase K00052 - 1.1.1.85 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004063 321.0
DYD1_k127_902754_12 Synthesizes selenophosphate from selenide and ATP K01008 - 2.7.9.3 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006412 315.0
DYD1_k127_902754_13 Belongs to the D-alanine--D-alanine ligase family K01921 - 6.3.2.4 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009912 308.0
DYD1_k127_902754_14 Lycopene cyclase protein K10960,K21401 - 1.3.1.111,1.3.1.83,1.3.99.38 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000008398 311.0
DYD1_k127_902754_15 Endonuclease that specifically degrades the RNA of RNA- DNA hybrids K03469 - 3.1.26.4 0.0000000000000000000000000000000000000000000000000000000007303 209.0
DYD1_k127_902754_16 helix_turn_helix isocitrate lyase regulation - - - 0.0000000000000000000000000000000000000000000000000000006652 202.0
DYD1_k127_902754_17 PFAM Squalene phytoene synthase K00801 - 2.5.1.21 0.0000000000000000000000000000000000000000000000000005249 208.0
DYD1_k127_902754_18 Aldehyde dehydrogenase family K00294 - 1.2.1.88 0.000000000000000000000000000000000000000000000000001781 188.0
DYD1_k127_902754_19 Belongs to the D-alanine--D-alanine ligase family K01921 - 6.3.2.4 0.0000000000000000000000000000000000000000000000001241 198.0
DYD1_k127_902754_2 elongation factor G K02355 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000305 584.0
DYD1_k127_902754_20 Key enzyme in folate metabolism. Catalyzes an essential reaction for de novo glycine and purine synthesis, and for DNA precursor synthesis K00287 - 1.5.1.3 0.00000000000000000000000000000000000000000003379 177.0
DYD1_k127_902754_21 Belongs to the D-alanine--D-alanine ligase family K01921 - 6.3.2.4 0.000000000000000000000000000000002415 139.0
DYD1_k127_902754_22 - - - - 0.0000000000000000000000000003656 133.0
DYD1_k127_902754_23 - - - - 0.00000000000000000000001064 111.0
DYD1_k127_902754_24 Peptidase family S58 - - - 0.000000000000000000005776 96.0
DYD1_k127_902754_25 Predicted membrane protein (DUF2231) - - - 0.000000000000000009066 93.0
DYD1_k127_902754_26 PFAM Cytidine and deoxycytidylate deaminase zinc-binding region K01493 - 3.5.4.12 0.00000000000000006173 93.0
DYD1_k127_902754_27 Amino acid permease K20265 - - 0.000004869 49.0
DYD1_k127_902754_28 Peptidase dimerisation domain K01439,K13049 - 3.5.1.18 0.0001335 49.0
DYD1_k127_902754_3 Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family K00823 - 2.6.1.19 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000503 550.0
DYD1_k127_902754_4 negative regulation of mitochondrial outer membrane permeabilization involved in apoptotic signaling pathway K07508,K17972 GO:0001666,GO:0003674,GO:0003824,GO:0003988,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005739,GO:0005759,GO:0006066,GO:0006082,GO:0006084,GO:0006139,GO:0006163,GO:0006629,GO:0006631,GO:0006635,GO:0006637,GO:0006694,GO:0006695,GO:0006725,GO:0006732,GO:0006753,GO:0006790,GO:0006793,GO:0006796,GO:0006807,GO:0006810,GO:0006839,GO:0006915,GO:0006950,GO:0006996,GO:0007005,GO:0007006,GO:0008150,GO:0008152,GO:0008202,GO:0008203,GO:0008219,GO:0008610,GO:0008637,GO:0009056,GO:0009058,GO:0009062,GO:0009117,GO:0009150,GO:0009259,GO:0009628,GO:0009966,GO:0009968,GO:0009987,GO:0010639,GO:0010646,GO:0010648,GO:0010821,GO:0010823,GO:0010941,GO:0012501,GO:0016042,GO:0016043,GO:0016054,GO:0016125,GO:0016126,GO:0016408,GO:0016740,GO:0016746,GO:0016747,GO:0019395,GO:0019637,GO:0019693,GO:0019752,GO:0023051,GO:0023057,GO:0030258,GO:0031974,GO:0032787,GO:0032879,GO:0033043,GO:0033554,GO:0033865,GO:0033875,GO:0034032,GO:0034440,GO:0034641,GO:0035383,GO:0035795,GO:0036293,GO:0036294,GO:0042221,GO:0042981,GO:0043066,GO:0043067,GO:0043069,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0043233,GO:0043436,GO:0043603,GO:0044237,GO:0044238,GO:0044242,GO:0044248,GO:0044255,GO:0044281,GO:0044282,GO:0044283,GO:0044422,GO:0044424,GO:0044429,GO:0044444,GO:0044446,GO:0044464,GO:0046165,GO:0046395,GO:0046483,GO:0046902,GO:0048519,GO:0048523,GO:0048583,GO:0048585,GO:0050789,GO:0050794,GO:0050896,GO:0051049,GO:0051051,GO:0051128,GO:0051129,GO:0051179,GO:0051186,GO:0051234,GO:0051716,GO:0055086,GO:0055114,GO:0060548,GO:0061024,GO:0065007,GO:0065008,GO:0070013,GO:0070482,GO:0070887,GO:0071453,GO:0071456,GO:0071704,GO:0071840,GO:0072329,GO:0072521,GO:0090559,GO:1901028,GO:1901029,GO:1901135,GO:1901360,GO:1901362,GO:1901564,GO:1901575,GO:1901576,GO:1901615,GO:1901617,GO:1902108,GO:1902109,GO:1902652,GO:1902653,GO:1905709,GO:2001233,GO:2001234 2.3.1.16,2.3.1.254 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001617 460.0
DYD1_k127_902754_5 Catalyzes the reductive methylation of 2'-deoxyuridine- 5'-monophosphate (dUMP) to 2'-deoxythymidine-5'-monophosphate (dTMP) while utilizing 5,10-methylenetetrahydrofolate (mTHF) as the methyl donor and reductant in the reaction, yielding dihydrofolate (DHF) as a by-product. This enzymatic reaction provides an intracellular de novo source of dTMP, an essential precursor for DNA biosynthesis K00560 - 2.1.1.45 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003799 436.0
DYD1_k127_902754_6 PFAM Rieske 2Fe-2S domain protein K00479,K00499 - 1.14.15.7 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004429 441.0
DYD1_k127_902754_7 lysine 2,3-aminomutase activity K01843 - 5.4.3.2 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002184 433.0
DYD1_k127_902754_8 Aminotransferase class-III K03851,K15372 - 2.6.1.55,2.6.1.77 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004347 414.0
DYD1_k127_902754_9 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain K00074 - 1.1.1.157 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000136 378.0
DYD1_k127_918190_0 Domain of unknown function (DUF927) - - - 0.0000000000000000000000000000000000000000000000000000000000000000001523 257.0
DYD1_k127_918190_1 TOPRIM - - - 0.000000000000000000000000000000000000000000000000000009551 214.0
DYD1_k127_918190_2 - - - - 0.000000000000000000000000000000000000000003529 165.0
DYD1_k127_918190_3 Homeodomain-like domain K07497 - - 0.000000000000000000000000000000000000009116 147.0
DYD1_k127_943487_0 Protein export membrane protein - - - 0.0 1027.0
DYD1_k127_943487_1 Belongs to the Glu Leu Phe Val dehydrogenases family K00261 - 1.4.1.3 1.662e-209 660.0
DYD1_k127_943487_10 Protein of unknown function (DUF2892) - - - 0.00000003294 55.0
DYD1_k127_943487_11 - - - - 0.00001984 53.0
DYD1_k127_943487_12 Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family - - - 0.0001065 51.0
DYD1_k127_943487_2 Type II/IV secretion system protein K02669 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004963 513.0
DYD1_k127_943487_3 Peptidase dimerisation domain K01295 - 3.4.17.11 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003048 452.0
DYD1_k127_943487_4 PhoQ Sensor - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003238 328.0
DYD1_k127_943487_5 phosphorelay signal transduction system K02483 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000004224 278.0
DYD1_k127_943487_6 PPIases accelerate the folding of proteins. It catalyzes the cis-trans isomerization of proline imidic peptide bonds in oligopeptides K03768 - 5.2.1.8 0.000000000000000000000000000000000000000000000000000005392 198.0
DYD1_k127_943487_7 Sigma-70, region 4 K03088 GO:0000988,GO:0000990,GO:0003674,GO:0005575,GO:0005618,GO:0005623,GO:0006355,GO:0006950,GO:0006979,GO:0008150,GO:0009266,GO:0009408,GO:0009628,GO:0009889,GO:0009987,GO:0010468,GO:0010556,GO:0016987,GO:0019219,GO:0019222,GO:0030312,GO:0031323,GO:0031326,GO:0033554,GO:0034605,GO:0043254,GO:0044087,GO:0044464,GO:0050789,GO:0050794,GO:0050896,GO:0051128,GO:0051171,GO:0051252,GO:0051409,GO:0051716,GO:0060255,GO:0065007,GO:0071944,GO:0080090,GO:0140110,GO:1903506,GO:2000112,GO:2000142,GO:2001141 - 0.0000000000000000000000000002496 123.0
DYD1_k127_943487_8 GIY-YIG catalytic domain K07461 - - 0.00000000000000000000001743 102.0
DYD1_k127_943487_9 His Kinase A (phosphoacceptor) domain - - - 0.00000000000000003682 86.0
DYD1_k127_952802_0 receptor K16091 - - 2.515e-200 654.0
DYD1_k127_952802_1 O-acyltransferase activity - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003391 355.0
DYD1_k127_952802_2 histidine kinase A domain protein K02482 - 2.7.13.3 0.000000000000000000000000000000000000000000000000000000000000000000000000005117 279.0
DYD1_k127_981163_0 - - - - 0.00000005952 65.0
DYD1_k127_981163_1 - K02671 - - 0.0006898 49.0