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Overview

ID MAG00866
Name DYD1_bin.45
Sample SMP0025
Taxonomy
Kingdom Bacteria
Phylum Bacteroidota
Class Bacteroidia
Order Flavobacteriales
Family Flavobacteriaceae
Genus Flagellimonas
Species Flagellimonas taeanensis
Assembly information
Completeness (%) 55.41
Contamination (%) 0.78
GC content (%) 46.0
N50 (bp) 3,867
Genome size (bp) 2,188,690

Location

Module

Module ID Module name Total genes Total steps Contain genes Contain steps Percentage of genes Percentage of steps

Genes2434

Gene name Description KEGG GOs EC E-value Score Sequence
DYD1_k127_10015_0 argininosuccinate lyase K01755 GO:0003674,GO:0003824,GO:0004056,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006082,GO:0006520,GO:0006525,GO:0006526,GO:0006591,GO:0006807,GO:0008150,GO:0008152,GO:0008652,GO:0009058,GO:0009064,GO:0009084,GO:0009987,GO:0016053,GO:0016829,GO:0016840,GO:0016842,GO:0019752,GO:0042450,GO:0043436,GO:0044237,GO:0044238,GO:0044249,GO:0044281,GO:0044283,GO:0044424,GO:0044464,GO:0046394,GO:0071704,GO:1901564,GO:1901566,GO:1901576,GO:1901605,GO:1901607 4.3.2.1 6.683e-229 711.0
DYD1_k127_10015_1 Acetylornithine deacetylase K01438 - 3.5.1.16 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001871 438.0
DYD1_k127_100884_0 Condensation of UDP-2,3-diacylglucosamine and 2,3- diacylglucosamine-1-phosphate to form lipid A disaccharide, a precursor of lipid A, a phosphorylated glycolipid that anchors the lipopolysaccharide to the outer membrane of the cell K00748 - 2.4.1.182 1.138e-217 677.0
DYD1_k127_100884_1 Nucleotidase that shows phosphatase activity on nucleoside 5'-monophosphates K03787 - 3.1.3.5 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005063 511.0
DYD1_k127_100884_2 Belongs to the peptidase S41A family K03797 - 3.4.21.102 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002641 417.0
DYD1_k127_100884_3 NlpC P60 family K13695 - - 0.00000000000000000000000000000000000002152 145.0
DYD1_k127_100884_4 - - - - 0.0000000000000000000000000000000000001971 142.0
DYD1_k127_1009410_0 aminopeptidase K01262 - 3.4.11.9 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004498 370.0
DYD1_k127_1009410_1 Protein of unknown function (DUF2721) - - - 0.0000000000000000000000000000000000000000000000000000000000001669 214.0
DYD1_k127_1009410_2 - - - - 0.000000000000000000000000000000000000000002169 156.0
DYD1_k127_1011828_0 Endonuclease - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002195 574.0
DYD1_k127_1011828_1 TonB-dependent receptor - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005487 548.0
DYD1_k127_1011828_2 TonB-dependent receptor - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001484 467.0
DYD1_k127_1011828_3 - - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000005957 265.0
DYD1_k127_1012080_0 TonB dependent receptor K02014 - - 0.0 1125.0
DYD1_k127_1012080_1 PFAM FAD-dependent pyridine nucleotide-disulphide oxidoreductase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001765 422.0
DYD1_k127_1012080_2 regulator K03711 - - 0.000000000000000000000000000000000000000000000000000001217 193.0
DYD1_k127_1012080_3 Domain of unknown function (DUF4625) - - - 0.00000000000000000000000006876 108.0
DYD1_k127_1012080_4 - - - - 0.00000000000000005256 84.0
DYD1_k127_101230_0 Aldehyde dehydrogenase family K00294,K13821 - 1.2.1.88,1.5.5.2 1.475e-316 971.0
DYD1_k127_101230_1 Creatinine amidohydrolase K01470 - 3.5.2.10 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002144 460.0
DYD1_k127_101230_2 Specifically methylates the N7 position of a guanine in 16S rRNA K03501 GO:0000154,GO:0001510,GO:0003674,GO:0003824,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006139,GO:0006364,GO:0006396,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0008168,GO:0008170,GO:0008173,GO:0008649,GO:0008757,GO:0009451,GO:0009987,GO:0010467,GO:0016070,GO:0016072,GO:0016435,GO:0016740,GO:0016741,GO:0022613,GO:0031167,GO:0032259,GO:0034470,GO:0034641,GO:0034660,GO:0036265,GO:0042254,GO:0043170,GO:0043412,GO:0043414,GO:0044085,GO:0044237,GO:0044238,GO:0044260,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0070043,GO:0070475,GO:0070476,GO:0071704,GO:0071840,GO:0090304,GO:0140098,GO:0140102,GO:1901360 2.1.1.170 0.00000000000000000003108 90.0
DYD1_k127_101230_3 This protein binds to 23S rRNA in the presence of protein L20 K02888 - - 0.000000000000000001759 87.0
DYD1_k127_101533_0 glucosamine-6-phosphate deaminase K02564 - 3.5.99.6 4.483e-305 944.0
DYD1_k127_101533_1 transcriptional regulatory protein - GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0044424,GO:0044444,GO:0044464 - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003635 441.0
DYD1_k127_101533_2 Catalyzes the reduction of dTDP-6-deoxy-L-lyxo-4- hexulose to yield dTDP-L-rhamnose K00067 - 1.1.1.133 0.0000000000000000000000000000000000000000000000000000000000000000000000843 240.0
DYD1_k127_101533_3 pterin-4-alpha-carbinolamine dehydratase K01724 - 4.2.1.96 0.000000000000000000000000000000000009934 138.0
DYD1_k127_1016830_0 Asparaginyl-tRNA synthetase K01893 - 6.1.1.22 1.154e-293 904.0
DYD1_k127_1016830_1 RNA polymerase sigma54 factor K03092 - - 4.918e-284 876.0
DYD1_k127_1016830_2 of the RND superfamily K07003 - - 1.225e-237 738.0
DYD1_k127_1016830_3 phosphoesterase, PA-phosphatase related - - - 0.00000000000000000000000000000000000000000000000000000000002859 208.0
DYD1_k127_1034610_0 Raffinose synthase or seed imbibition protein Sip1 - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002819 342.0
DYD1_k127_1034610_1 SusD family K21572 - - 0.000000000000000000000000000000000000000000000000000000000000000000000004113 252.0
DYD1_k127_1036947_0 Alpha/beta hydrolase family - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003585 429.0
DYD1_k127_1036947_1 Phenazine biosynthesis-like protein - - - 0.0000000000000000000000000000000000000799 145.0
DYD1_k127_1036947_2 Tautomerase enzyme K01821 - 5.3.2.6 0.00000000004059 63.0
DYD1_k127_1069451_0 ATP-dependent specificity component of the Clp protease. It directs the protease to specific substrates. Can perform chaperone functions in the absence of ClpP K03544 GO:0000166,GO:0003674,GO:0003824,GO:0004176,GO:0005488,GO:0005524,GO:0006508,GO:0006807,GO:0008144,GO:0008150,GO:0008152,GO:0008233,GO:0009056,GO:0009057,GO:0009987,GO:0016462,GO:0016787,GO:0016817,GO:0016818,GO:0016887,GO:0017076,GO:0017111,GO:0019538,GO:0030163,GO:0030554,GO:0032553,GO:0032555,GO:0032559,GO:0035639,GO:0036094,GO:0042623,GO:0043167,GO:0043168,GO:0043170,GO:0044238,GO:0051301,GO:0070011,GO:0071704,GO:0097159,GO:0097367,GO:0140096,GO:1901265,GO:1901363,GO:1901564,GO:1901565,GO:1901575 - 8.982e-252 778.0
DYD1_k127_1069451_1 GH3 auxin-responsive promoter - - - 2.08e-231 717.0
DYD1_k127_1069451_2 Cleaves peptides in various proteins in a process that requires ATP hydrolysis. Has a chymotrypsin-like activity. Plays a major role in the degradation of misfolded proteins K01358 - 3.4.21.92 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002211 334.0
DYD1_k127_1069451_3 - - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000003042 296.0
DYD1_k127_1073124_0 TonB-dependent receptor plug - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003001 416.0
DYD1_k127_1073124_1 transcriptional regulator K02529,K05499 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004519 396.0
DYD1_k127_1083415_0 G-D-S-L family lipolytic protein - - - 6.649e-262 814.0
DYD1_k127_1083415_1 Involved in the regulation of the intracellular balance of NAD and NADP, and is a key enzyme in the biosynthesis of NADP. Catalyzes specifically the phosphorylation on 2'-hydroxyl of the adenosine moiety of NAD to yield NADP K00858 - 2.7.1.23 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006949 507.0
DYD1_k127_1083415_2 Catalyzes the complicated ring closure reaction between the two acyclic compounds 1-deoxy-D-xylulose-5-phosphate (DXP) and 3-amino-2-oxopropyl phosphate (1-amino-acetone-3-phosphate or AAP) to form pyridoxine 5'-phosphate (PNP) and inorganic phosphate K03474 GO:0003674,GO:0003824,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006725,GO:0006766,GO:0006767,GO:0006807,GO:0008150,GO:0008152,GO:0008614,GO:0008615,GO:0009058,GO:0009110,GO:0009987,GO:0016740,GO:0016769,GO:0017144,GO:0018130,GO:0019438,GO:0033856,GO:0034641,GO:0042364,GO:0042816,GO:0042819,GO:0044237,GO:0044249,GO:0044271,GO:0044281,GO:0044283,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0051186,GO:0051188,GO:0071704,GO:0072524,GO:0072525,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576,GO:1901615,GO:1901617 2.6.99.2 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001615 440.0
DYD1_k127_1083415_3 Alpha beta hydrolase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008558 434.0
DYD1_k127_1083415_4 Acetoin utilization protein - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009525 378.0
DYD1_k127_1083415_5 Inorganic polyphosphate kinase - - - 0.0000000000000000000000000000000000000000000000000000000000000000001126 231.0
DYD1_k127_1091046_0 Belongs to the glycosyl hydrolase 28 family - - - 2.196e-205 652.0
DYD1_k127_1091046_1 Pfam:SusD K21572 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005389 302.0
DYD1_k127_1102233_0 COG3540 Phosphodiesterase alkaline phosphatase D K01113 - 3.1.3.1 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004054 397.0
DYD1_k127_1102233_1 it is required for DNA replication and normal SOS inducibility. RecF binds preferentially to single-stranded, linear DNA. It also seems to bind ATP K03629 GO:0000731,GO:0006139,GO:0006259,GO:0006281,GO:0006302,GO:0006725,GO:0006807,GO:0006950,GO:0006974,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0018130,GO:0019438,GO:0033554,GO:0034641,GO:0034645,GO:0034654,GO:0043170,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044271,GO:0046483,GO:0050896,GO:0051716,GO:0071704,GO:0071897,GO:0090304,GO:1901360,GO:1901362,GO:1901576 - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001548 311.0
DYD1_k127_1102233_2 Major role in the synthesis of nucleoside triphosphates other than ATP. The ATP gamma phosphate is transferred to the NDP beta phosphate via a ping-pong mechanism, using a phosphorylated active-site intermediate K00940 - 2.7.4.6 0.00000000000000000000000000000000000000000000000000000000000000000000000000000004308 269.0
DYD1_k127_1102233_3 - - - - 0.0000000000000000000000000000000000000000000000000000000000004336 213.0
DYD1_k127_1102233_4 (GNAT) family - - - 0.0000000000000000000000000000000000000000000000000000000000005803 216.0
DYD1_k127_1102233_5 Zn-ribbon-containing, possibly RNA-binding protein and truncated derivatives - - - 0.00000000000000000000000000000000000000000000000009068 179.0
DYD1_k127_1105499_0 transcriptional regulator K18954 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008062 377.0
DYD1_k127_1105499_1 Rifampin ADP-ribosyl transferase - - - 0.00000000000000000000000000000000000000000000000000000000000002418 217.0
DYD1_k127_1105499_2 RibD C-terminal domain K00287 - 1.5.1.3 0.00000000000000000000000000001646 121.0
DYD1_k127_1105499_3 Kazal type serine protease inhibitors - - - 0.000000000000000000000008626 102.0
DYD1_k127_1113189_0 amino acid carrier protein K03310 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001437 564.0
DYD1_k127_1113189_1 - - - - 0.00000000000000000000000000000000000000000000000000000000000000001939 230.0
DYD1_k127_1113189_2 Berberine and berberine like - - - 0.0000000000000000000000003006 105.0
DYD1_k127_1113189_3 Berberine and berberine like - - - 0.000000000000001054 76.0
DYD1_k127_1113189_4 PFAM conserved - - - 0.0003338 46.0
DYD1_k127_1113301_0 Membrane protease subunits, stomatin prohibitin homologs - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002503 486.0
DYD1_k127_1113301_1 ATP phosphoribosyltransferase K00765 GO:0000105,GO:0003674,GO:0003824,GO:0003879,GO:0006082,GO:0006520,GO:0006547,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0008652,GO:0009058,GO:0009987,GO:0016053,GO:0016740,GO:0016757,GO:0016763,GO:0018130,GO:0019438,GO:0019752,GO:0034641,GO:0043436,GO:0044237,GO:0044238,GO:0044249,GO:0044281,GO:0044283,GO:0046394,GO:0046483,GO:0052803,GO:0071704,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576,GO:1901605,GO:1901607 2.4.2.17 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004112 468.0
DYD1_k127_1113301_2 oxidoreductase activity - - - 0.000000000000000000000000000000000204 133.0
DYD1_k127_1127437_0 Tetratricopeptide repeat - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003279 331.0
DYD1_k127_1127437_1 Conjugative transposon protein TraO - - - 0.000000000000000000002768 101.0
DYD1_k127_1127557_0 Is required not only for elongation of protein synthesis but also for the initiation of all mRNA translation through initiator tRNA(fMet) aminoacylation K01874 GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006082,GO:0006139,GO:0006399,GO:0006412,GO:0006418,GO:0006518,GO:0006520,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0016070,GO:0019538,GO:0019752,GO:0034641,GO:0034645,GO:0034660,GO:0043038,GO:0043039,GO:0043043,GO:0043170,GO:0043436,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044281,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0071704,GO:0090304,GO:1901360,GO:1901564,GO:1901566,GO:1901576 6.1.1.10 0.0 1117.0
DYD1_k127_1127557_1 - - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000005404 311.0
DYD1_k127_1129007_0 Belongs to the cysteine synthase cystathionine beta- synthase family K12339 - 2.5.1.47 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003784 539.0
DYD1_k127_1129007_1 Serine acetyltransferase K00640 - 2.3.1.30 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003998 402.0
DYD1_k127_1129007_2 TIGR02453 family - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004347 383.0
DYD1_k127_1129007_3 - - - - 0.000000000000000000007351 92.0
DYD1_k127_1129007_4 lactoylglutathione lyase activity - - - 0.0000007889 50.0
DYD1_k127_1137149_0 TonB-linked outer membrane protein, SusC RagA family - - - 0.0 1189.0
DYD1_k127_1137149_1 Starch-binding associating with outer membrane - - - 4.811e-252 782.0
DYD1_k127_1137149_2 COG2939 Carboxypeptidase C (cathepsin A) - - - 0.0000000000000000000000000000000000000000000000000000000000000001079 224.0
DYD1_k127_1141788_0 Mediates influx of magnesium ions K03284 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001482 460.0
DYD1_k127_1141788_1 Anti-sigma-K factor RskA - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001355 403.0
DYD1_k127_1141788_2 OmpW family K07275 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008256 355.0
DYD1_k127_1141788_3 Belongs to the sigma-70 factor family. ECF subfamily K03088 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001042 314.0
DYD1_k127_1141788_4 Destroys radicals which are normally produced within the cells and which are toxic to biological systems K04565 - 1.15.1.1 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000005543 279.0
DYD1_k127_1141788_5 acetyltransferase K06975 - - 0.000000000000000000000000000000000000000003119 158.0
DYD1_k127_1141788_6 Divergent 4Fe-4S mono-cluster - - - 0.0000000000000000000000000000001148 125.0
DYD1_k127_1167317_0 glucosamine-6-phosphate deaminase K02564 - 3.5.99.6 0.0 1174.0
DYD1_k127_1167317_1 DeoR C terminal sensor domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000003449 261.0
DYD1_k127_1167317_2 TonB dependent receptor - - - 0.00000000000000000007824 95.0
DYD1_k127_1167317_3 Phosphoribosyl synthetase-associated domain K00948 - 2.7.6.1 0.00000000000007494 74.0
DYD1_k127_116991_0 Alcohol dehydrogenase class IV K19714 - 1.1.3.48 1.212e-213 666.0
DYD1_k127_116991_1 hydrolase K07025 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001707 413.0
DYD1_k127_116991_2 Acyltransferase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001921 325.0
DYD1_k127_116991_3 Activates KDO (a required 8-carbon sugar) for incorporation into bacterial lipopolysaccharide in Gram-negative bacteria K00979,K19714 - 1.1.3.48,2.7.7.38 0.00000000000000000000000000000000000001811 145.0
DYD1_k127_119691_0 Belongs to the class-II aminoacyl-tRNA synthetase family K04567 - 6.1.1.6 0.0 1039.0
DYD1_k127_119691_1 Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003205 509.0
DYD1_k127_119691_2 Thiol-disulfide isomerase and thioredoxins - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000002327 269.0
DYD1_k127_119691_3 - - - - 0.00000000000000002885 81.0
DYD1_k127_119691_4 Tetratricopeptide repeat - - - 0.00000001096 65.0
DYD1_k127_1199951_0 Required for the formation of a threonylcarbamoyl group on adenosine at position 37 (t(6)A37) in tRNAs that read codons beginning with adenine. Is involved in the transfer of the threonylcarbamoyl moiety of threonylcarbamoyl-AMP (TC-AMP) to the N6 group of A37, together with TsaE and TsaB. TsaD likely plays a direct catalytic role in this reaction K01409 GO:0000408,GO:0002949,GO:0005575,GO:0005622,GO:0005623,GO:0006139,GO:0006396,GO:0006399,GO:0006400,GO:0006725,GO:0006807,GO:0008033,GO:0008150,GO:0008152,GO:0009451,GO:0009987,GO:0010467,GO:0016070,GO:0032991,GO:0034470,GO:0034641,GO:0034660,GO:0043170,GO:0043412,GO:0044237,GO:0044238,GO:0044424,GO:0044464,GO:0046483,GO:0070525,GO:0071704,GO:0090304,GO:1901360 2.3.1.234 7.345e-199 622.0
DYD1_k127_1199951_1 PFAM Family of - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000004134 264.0
DYD1_k127_12112_0 Protein of unknown function (DUF2569) - - - 2.039e-222 717.0
DYD1_k127_12112_1 Catalyzes the attachment of tyrosine to tRNA(Tyr) in a two-step reaction tyrosine is first activated by ATP to form Tyr- AMP and then transferred to the acceptor end of tRNA(Tyr) K01866 GO:0003674,GO:0003824,GO:0004812,GO:0004831,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006082,GO:0006139,GO:0006399,GO:0006520,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0009987,GO:0016070,GO:0016874,GO:0016875,GO:0019752,GO:0034641,GO:0034660,GO:0043038,GO:0043039,GO:0043170,GO:0043436,GO:0044237,GO:0044238,GO:0044281,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0071704,GO:0090304,GO:0140098,GO:0140101,GO:1901360,GO:1901564 6.1.1.1 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001141 504.0
DYD1_k127_12112_2 acyl transferase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003981 501.0
DYD1_k127_12112_3 Catalyzes the attachment of tyrosine to tRNA(Tyr) in a two-step reaction tyrosine is first activated by ATP to form Tyr- AMP and then transferred to the acceptor end of tRNA(Tyr) K01866 GO:0003674,GO:0003824,GO:0004812,GO:0004831,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006082,GO:0006139,GO:0006399,GO:0006520,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0009987,GO:0016070,GO:0016874,GO:0016875,GO:0019752,GO:0034641,GO:0034660,GO:0043038,GO:0043039,GO:0043170,GO:0043436,GO:0044237,GO:0044238,GO:0044281,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0071704,GO:0090304,GO:0140098,GO:0140101,GO:1901360,GO:1901564 6.1.1.1 0.00000000000000000000000000000000000000000000000000000000000000000000000000000004616 268.0
DYD1_k127_12112_4 negative chemotaxis - - - 0.0000000000000000000000000000000000000000000000000000001828 196.0
DYD1_k127_12112_5 secretion protein - - - 0.00000000000000000000000000000000000000000000000005736 181.0
DYD1_k127_12112_6 Parallel beta-helix repeats - - - 0.0000000000000000000004906 97.0
DYD1_k127_1233522_0 His Kinase A (phosphoacceptor) domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002409 496.0
DYD1_k127_1233522_1 PFAM Response regulator receiver domain - - - 0.000000000000000000000000000000000000000000000000001082 186.0
DYD1_k127_1233522_2 H( )-stimulated, divalent metal cation uptake system - - - 0.00000000001487 64.0
DYD1_k127_1240172_0 Belongs to the MurCDEF family K01924 - 6.3.2.8 8.419e-261 807.0
DYD1_k127_1240172_1 Belongs to the SEDS family K03588 - - 7.685e-239 740.0
DYD1_k127_1240172_2 Cell wall formation. Catalyzes the transfer of a GlcNAc subunit on undecaprenyl-pyrophosphoryl-MurNAc-pentapeptide (lipid intermediate I) to form undecaprenyl-pyrophosphoryl-MurNAc- (pentapeptide)GlcNAc (lipid intermediate II) K02563 - 2.4.1.227 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000841 498.0
DYD1_k127_1240172_3 Cell wall formation. Catalyzes the addition of glutamate to the nucleotide precursor UDP-N-acetylmuramoyl-L-alanine (UMA) K01925 - 6.3.2.9 0.0000000000000000000000000000000000000000001034 159.0
DYD1_k127_1240172_4 Cell division protein FtsQ K03589 - - 0.00000000000000000000000000000001627 130.0
DYD1_k127_1242944_0 Methylmalonyl-CoA mutase K01847 - 5.4.99.2 0.0 1231.0
DYD1_k127_1242944_1 Belongs to the peptidase S26 family K03100 - 3.4.21.89 0.0 1080.0
DYD1_k127_1242944_10 WbqC-like protein family - - - 0.00000000000000000766 84.0
DYD1_k127_1242944_2 Belongs to the ParB family K03497 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005397 516.0
DYD1_k127_1242944_3 Methylmalonyl-CoA mutase K01847 - 5.4.99.2 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004579 513.0
DYD1_k127_1242944_4 chromosome partitioning K03496 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005605 493.0
DYD1_k127_1242944_5 Catalyzes the conversion of 4-hydroxy- tetrahydrodipicolinate (HTPA) to tetrahydrodipicolinate K00215 - 1.17.1.8 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002622 406.0
DYD1_k127_1242944_6 - - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002204 330.0
DYD1_k127_1242944_7 Septum formation initiator - - - 0.000000000000000000000000000000000000000000000000292 177.0
DYD1_k127_1242944_8 PFAM S23 ribosomal protein - - - 0.00000000000000000000000000000000000000000000001444 173.0
DYD1_k127_1242944_9 uridine kinase K00876 - 2.7.1.48 0.00000000000000000000000000000000000000000005226 160.0
DYD1_k127_1244516_0 COG0577 ABC-type antimicrobial peptide transport system permease component - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001784 600.0
DYD1_k127_126074_0 penicillin-binding protein K05366 - 2.4.1.129,3.4.16.4 0.0 1405.0
DYD1_k127_126074_1 COG1788 Acyl CoA acetate 3-ketoacid CoA transferase, alpha subunit K01027,K01028,K01031,K01034 - 2.8.3.5,2.8.3.6,2.8.3.8,2.8.3.9 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004988 452.0
DYD1_k127_126074_2 COG2057 Acyl CoA acetate 3-ketoacid CoA transferase, beta subunit K01029,K01032 - 2.8.3.5,2.8.3.6 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003146 414.0
DYD1_k127_126074_3 Gliding motility-associated lipoprotein, GldH - GO:0006022,GO:0006026,GO:0006030,GO:0006032,GO:0006040,GO:0006807,GO:0006928,GO:0008150,GO:0008152,GO:0009056,GO:0009057,GO:0009987,GO:0017144,GO:0040011,GO:0042737,GO:0043170,GO:0044237,GO:0044248,GO:0046348,GO:0048870,GO:0051179,GO:0051674,GO:0071704,GO:0071976,GO:1901071,GO:1901072,GO:1901135,GO:1901136,GO:1901564,GO:1901565,GO:1901575 - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000009428 267.0
DYD1_k127_126074_4 PFAM PSP1 C-terminal conserved region - - - 0.000000000000000000000000000000000000000000000001389 176.0
DYD1_k127_1302305_0 Catalyzes the 2'-O-methylation of the ribose of cytidine 1402 (C1402) in 16S rRNA K07056 - 2.1.1.198 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001318 406.0
DYD1_k127_1302305_1 Carboxymuconolactone decarboxylase family - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000033 378.0
DYD1_k127_1302305_2 Uracil DNA glycosylase superfamily - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002144 352.0
DYD1_k127_1302305_3 redox protein regulator of disulfide bond formation K07397 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000003683 271.0
DYD1_k127_1302305_4 YhhN family - - - 0.000000000000000000000000000000000000000000116 162.0
DYD1_k127_1302305_5 - - - - 0.0000000000000000000239 90.0
DYD1_k127_1336293_0 ATPase involved in DNA repair - - - 0.0 1553.0
DYD1_k127_1346464_0 Peptidase family M28 - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005022 485.0
DYD1_k127_1346464_1 ADP-glyceromanno-heptose 6-epimerase activity - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002487 430.0
DYD1_k127_1346464_2 Belongs to the sodium solute symporter (SSF) (TC 2.A.21) family K03307 - - 0.00000000000000000000000000000000000000001892 154.0
DYD1_k127_1350724_0 TonB-dependent receptor K02014,K16089 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002778 535.0
DYD1_k127_1350724_1 divalent heavy-metal cations transporter K07238 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004725 511.0
DYD1_k127_1350724_2 dependent repressor K03709 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001822 386.0
DYD1_k127_1350724_3 Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family K15727 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000001084 264.0
DYD1_k127_135260_0 Receptor - - - 0.0 1071.0
DYD1_k127_135260_1 tetratricopeptide repeat - - - 1.947e-321 989.0
DYD1_k127_135260_2 SusD family - - - 0.00000000000000000000000000000000000000000000001022 172.0
DYD1_k127_1357272_0 Transketolase K00615 - 2.2.1.1 8.102e-198 617.0
DYD1_k127_1357272_1 peptidyl-prolyl - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001516 363.0
DYD1_k127_1357272_2 Outer membrane protein beta-barrel domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001551 354.0
DYD1_k127_1357272_3 Transketolase K00615 - 2.2.1.1 0.0000000000000000000000000000000000000000000000000000000000000000000000000000001406 265.0
DYD1_k127_1358023_0 Converts 2,5-diamino-6-(ribosylamino)-4(3h)-pyrimidinone 5'-phosphate into 5-amino-6-(ribosylamino)-2,4(1h,3h)- pyrimidinedione 5'-phosphate K11752 - 1.1.1.193,3.5.4.26 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001988 441.0
DYD1_k127_1358023_1 acetyltransferase K03828 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000004541 285.0
DYD1_k127_1358023_2 Methylates the class 1 translation termination release factors RF1 PrfA and RF2 PrfB on the glutamine residue of the universally conserved GGQ motif K02493 GO:0003674,GO:0003824,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0008150,GO:0008152,GO:0008168,GO:0008757,GO:0016740,GO:0016741,GO:0032259,GO:0044424,GO:0044444,GO:0044464 2.1.1.297 0.00000000000000000000000000000000000000000000000000000001369 198.0
DYD1_k127_1361612_0 - - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005576 584.0
DYD1_k127_1361612_1 Catalyzes the reduction of dTDP-6-deoxy-L-lyxo-4- hexulose to yield dTDP-L-rhamnose K00067 - 1.1.1.133 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000513 339.0
DYD1_k127_1361612_2 - Catabolite gene activator and regulatory subunit of cAMP-dependent protein - - - 0.00000000000000000000000000000000004233 134.0
DYD1_k127_1367871_0 abc transporter (atp-binding protein) K01990 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002321 548.0
DYD1_k127_1367871_1 ATP binding to DnaK triggers the release of the substrate protein, thus completing the reaction cycle. Several rounds of ATP-dependent interactions between DnaJ, DnaK and GrpE are required for fully efficient folding. Also involved, together with DnaK and GrpE, in the DNA replication of plasmids through activation of initiation proteins K03686 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003355 533.0
DYD1_k127_1387840_0 Belongs to the MenA family. Type 1 subfamily K02548 - 2.5.1.74 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003301 465.0
DYD1_k127_1387840_1 - - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002866 355.0
DYD1_k127_1387840_2 Response regulator of the LytR AlgR family - - - 0.000000000000000000000000000000000000000000000000000000000000004005 217.0
DYD1_k127_1387840_3 protein conserved in bacteria K00243 - - 0.0000000000000000000000000000000001151 132.0
DYD1_k127_138853_0 Catalyzes the conversion of dihydroorotate to orotate with quinone as electron acceptor K00226,K00254 - 1.3.5.2,1.3.98.1 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009633 371.0
DYD1_k127_138853_1 Cleaves the N-terminal amino acid of tripeptides K01258 - 3.4.11.4 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000002463 293.0
DYD1_k127_138853_2 - - - - 0.000000000000000000000000000000000000000000000000000001438 195.0
DYD1_k127_1403488_0 SMP-30/Gluconolaconase/LRE-like region K01053 - 3.1.1.17 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002944 570.0
DYD1_k127_1403488_1 transcriptional regulator - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000006338 252.0
DYD1_k127_1403488_2 Prokaryotic glutathione synthetase, ATP-grasp domain - - - 0.000000000000000000000000000000000000000000000000000000000000004502 218.0
DYD1_k127_1421768_0 Catalyzes the methylthiolation of an aspartic acid residue of ribosomal protein S12 K14441 - 2.8.4.4 6.892e-270 833.0
DYD1_k127_1421768_1 Beta-lactamase class C and other penicillin binding - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008157 493.0
DYD1_k127_1421768_2 Beta-lactamase enzyme family - - - 0.000000000000000000000000000000000000000000000000000000000000004308 216.0
DYD1_k127_1431762_0 - - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005048 404.0
DYD1_k127_1431762_1 - - - - 0.000000000449 68.0
DYD1_k127_1432684_0 ribonuclease G K08301 - - 1.08e-259 803.0
DYD1_k127_1432684_1 a g-specific adenine glycosylase K03575 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004281 571.0
DYD1_k127_1432684_2 gliding motility-associated protein GldE - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004283 341.0
DYD1_k127_1432684_3 Plays an important role in DNA replication, recombination and repair. Binds to ssDNA and to an array of partner proteins to recruit them to their sites of action during DNA metabolism K03111 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000003059 271.0
DYD1_k127_1432684_4 Belongs to the bacterial histone-like protein family K03530 - - 0.000000000000000000000000000000000000000000000000000007848 189.0
DYD1_k127_1432684_5 - - - - 0.000001149 50.0
DYD1_k127_1468484_0 Participates in initiation and elongation during chromosome replication K02314 - 3.6.4.12 1.653e-312 960.0
DYD1_k127_1468484_1 - - - - 5.658e-252 781.0
DYD1_k127_1468484_2 dienelactone hydrolase K01061 - 3.1.1.45 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005215 464.0
DYD1_k127_1468484_3 Component of the acetyl coenzyme A carboxylase (ACC) complex. First, biotin carboxylase catalyzes the carboxylation of biotin on its carrier protein (BCCP) and then the CO(2) group is transferred by the carboxyltransferase to acetyl-CoA to form malonyl-CoA K01962 - 2.1.3.15,6.4.1.2 0.0000000000000000000000000000000000000000000000007784 175.0
DYD1_k127_1468484_4 dienelactone hydrolase K01061 - 3.1.1.45 0.0000000000000000000000002735 104.0
DYD1_k127_1473724_0 Protein of unknown function DUF72 - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001824 549.0
DYD1_k127_1473724_1 Domain of Unknown Function (DUF1080) - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006687 392.0
DYD1_k127_1473724_2 - - - - 0.0004217 42.0
DYD1_k127_1530072_0 Catalyzes the decarboxylation of four acetate groups of uroporphyrinogen-III to yield coproporphyrinogen-III K01599 - 4.1.1.37 2.765e-215 669.0
DYD1_k127_1530072_1 - - - - 0.0000000000000000000000000000000000000000000000000000000000000000000003315 242.0
DYD1_k127_1530072_2 Uroporphyrinogen-III synthase K01719 - 4.2.1.75 0.00000000000000000000000000000000006158 135.0
DYD1_k127_1530072_3 Coproporphyrinogen III oxidase K00228 - 1.3.3.3 0.000000000000000000000000001122 113.0
DYD1_k127_1541771_0 - - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009566 507.0
DYD1_k127_1541771_1 Outer membrane receptor for ferrienterochelin and colicins K16089 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001681 384.0
DYD1_k127_1548558_0 Belongs to the glyceraldehyde-3-phosphate dehydrogenase family K00134 - 1.2.1.12 5.048e-292 899.0
DYD1_k127_1548558_1 Trypsin-like serine proteases, typically periplasmic, contain C-terminal PDZ domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000459 350.0
DYD1_k127_1548558_2 - - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002026 310.0
DYD1_k127_1552580_0 FOG TPR repeat - - - 7.775e-274 847.0
DYD1_k127_1578188_0 Component of the sulfite reductase complex that catalyzes the 6-electron reduction of sulfite to sulfide. This is one of several activities required for the biosynthesis of L- cysteine from sulfate K00392 - 1.8.7.1 0.0 1187.0
DYD1_k127_1578188_1 Belongs to the TRAFAC class translation factor GTPase superfamily. Classic translation factor GTPase family. CysN NodQ subfamily K00955,K00956 - 2.7.1.25,2.7.7.4 5.447e-246 765.0
DYD1_k127_1578188_2 Catalyzes the formation of L-homocysteine from O- succinyl-L-homoserine (OSHS) and hydrogen sulfide K10764 - - 3.497e-228 711.0
DYD1_k127_1578188_3 sulfate adenylyltransferase K00957 - 2.7.7.4 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001159 602.0
DYD1_k127_1578188_4 3'-phosphoadenosine 5'-phosphosulfate sulfotransferase (PAPS reductase) FAD synthetase K00390 - 1.8.4.10,1.8.4.8 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004397 413.0
DYD1_k127_1578188_5 transcriptional regulator - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000001725 254.0
DYD1_k127_1578188_6 Predicted membrane protein (DUF2061) - - - 0.0000000000000000000000000000000000000003518 150.0
DYD1_k127_1581715_0 Large extracellular alpha-helical protein K06894 - - 0.0 2435.0
DYD1_k127_1581715_1 Outer membrane protein beta-barrel family - - - 0.000000000000000000000000000000000000000000001992 168.0
DYD1_k127_158357_0 LytTr DNA-binding domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000001 261.0
DYD1_k127_158357_1 Signal transduction histidine kinase, LytS - - - 0.0000000000000000000000000000000000000000000000000000000000000000002024 242.0
DYD1_k127_158357_2 Fatty acid hydroxylase superfamily - - - 0.00002358 49.0
DYD1_k127_1594928_0 PFAM Scaffold protein Nfu NifU N terminal - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001224 533.0
DYD1_k127_1594928_1 membrane - - - 0.000000000000000000000000000000000000000000000000000000000000000000002992 236.0
DYD1_k127_1632976_0 ATP-dependent DNA helicase RecQ K03654 - 3.6.4.12 0.0 1095.0
DYD1_k127_1632976_1 - - - - 0.0000000000000000000000000000000000000000000001478 169.0
DYD1_k127_1632976_2 - - - - 0.000000000000000000000000000000000000000000001015 166.0
DYD1_k127_1632976_3 Protein of unknown function (DUF2752) - - - 0.0000000000000000000000000000000000000000004194 159.0
DYD1_k127_1632976_4 DNA mismatch repair protein - - - 0.00000000000005654 72.0
DYD1_k127_1635584_0 Pfam:SusD K21572 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006826 469.0
DYD1_k127_1635584_1 Belongs to the glycosyl hydrolase 2 family K05970 - 3.1.1.53 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001826 420.0
DYD1_k127_1661595_0 Outer membrane protein assembly K07277 - - 0.0 1228.0
DYD1_k127_1661595_1 Catalyzes the condensation of isopentenyl diphosphate (IPP) with allylic pyrophosphates generating different type of terpenoids K00806 GO:0002094,GO:0003674,GO:0003824,GO:0004659,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006066,GO:0006629,GO:0006720,GO:0008150,GO:0008152,GO:0008299,GO:0008610,GO:0009058,GO:0009987,GO:0016093,GO:0016094,GO:0016740,GO:0016765,GO:0044237,GO:0044238,GO:0044249,GO:0044255,GO:0044281,GO:0044283,GO:0044424,GO:0044444,GO:0044464,GO:0046165,GO:0071704,GO:1901576,GO:1901615,GO:1901617 2.5.1.31 0.0000000000000000000000000000000000000000000000000000000000000000003797 229.0
DYD1_k127_1661595_2 Surface antigen K07277 - - 0.0000000000000000000005612 100.0
DYD1_k127_1667646_0 Glycine cleavage system P-protein K00281,K00283 - 1.4.4.2 0.0 1037.0
DYD1_k127_1667646_1 The glycine cleavage system catalyzes the degradation of glycine. The P protein binds the alpha-amino group of glycine through its pyridoxal phosphate cofactor K00281,K00283 - 1.4.4.2 0.000000000000000000000000000000000000000000000000000000000000002461 218.0
DYD1_k127_1667734_0 dihydroorotase K01465 - 3.5.2.3 3.691e-214 670.0
DYD1_k127_1667734_1 Phospholipase K06999 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000353 372.0
DYD1_k127_1667734_2 membrane - - - 0.000000000000000000000000000000000000000000000005338 174.0
DYD1_k127_1669738_0 GMC oxidoreductase - - - 2.161e-313 965.0
DYD1_k127_1669738_1 COGs COG4405 conserved - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001412 301.0
DYD1_k127_1669738_2 Oxidoreductase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000001412 277.0
DYD1_k127_1670557_0 COG3712 Fe2 -dicitrate sensor, membrane component - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001731 511.0
DYD1_k127_1670557_1 FAD dependent oxidoreductase K00301 - 1.5.3.1 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002242 392.0
DYD1_k127_1670557_2 Outer membrane receptor - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009347 316.0
DYD1_k127_1670557_3 Bacterial regulatory proteins, luxR family K03088 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000003058 269.0
DYD1_k127_1670557_4 transcriptional regulator (RpiR family) - - - 0.000000000000000000000002034 113.0
DYD1_k127_1671276_0 ligase activity - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001922 545.0
DYD1_k127_1671276_1 Transport and Golgi organisation 2 - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006401 356.0
DYD1_k127_1671276_2 lysine exporter protein (LysE YggA) - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000004858 291.0
DYD1_k127_1671276_3 DinB family - - - 0.0000000000000000000000000003564 119.0
DYD1_k127_1701081_0 C-type lectin (CTL) or carbohydrate-recognition domain (CRD) - - - 1.511e-203 661.0
DYD1_k127_1701081_1 Catalyzes the complex heterocyclic radical-mediated conversion of 6-carboxy-5,6,7,8-tetrahydropterin (CPH4) to 7- carboxy-7-deazaguanine (CDG), a step common to the biosynthetic pathways of all 7-deazapurine-containing compounds K10026 - 4.3.99.3 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004913 421.0
DYD1_k127_1701081_2 Methyltransferase domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001884 391.0
DYD1_k127_1701081_3 metallopeptidase activity - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003593 383.0
DYD1_k127_1701081_4 PFAM Uncharacterised protein family (UPF0153) K06940 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007394 306.0
DYD1_k127_1701081_5 Sterol desaturase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000002806 247.0
DYD1_k127_1711745_0 Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family - - - 0.0 1206.0
DYD1_k127_1711745_1 YeeE YedE family K07112 - - 0.00000000000000000000000000000000000000000000000000000000000000000009945 231.0
DYD1_k127_1711745_2 - - - - 0.0000000000000000000000000000000000000000000000005659 176.0
DYD1_k127_1711745_3 Protein of unknown function (DUF2892) - - - 0.00000000000000000000000000000001247 127.0
DYD1_k127_1725589_0 Catalyzes the attachment of proline to tRNA(Pro) in a two-step reaction proline is first activated by ATP to form Pro- AMP and then transferred to the acceptor end of tRNA(Pro) K01881 GO:0003674,GO:0003824,GO:0004812,GO:0004827,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006082,GO:0006139,GO:0006399,GO:0006412,GO:0006418,GO:0006433,GO:0006518,GO:0006520,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0016070,GO:0016874,GO:0016875,GO:0017101,GO:0019538,GO:0019752,GO:0032991,GO:0034641,GO:0034645,GO:0034660,GO:0043038,GO:0043039,GO:0043043,GO:0043170,GO:0043436,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044281,GO:0044424,GO:0044464,GO:0046483,GO:0071704,GO:0090304,GO:0140098,GO:0140101,GO:1901360,GO:1901564,GO:1901566,GO:1901576 6.1.1.15 3.605e-197 614.0
DYD1_k127_1725589_1 Prolyl-tRNA synthetase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000009824 287.0
DYD1_k127_1739514_0 Redoxin - - - 2.208e-207 650.0
DYD1_k127_1739514_1 Belongs to the phenylalanyl-tRNA synthetase beta subunit family. Type 1 subfamily K01890 GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006082,GO:0006139,GO:0006399,GO:0006412,GO:0006418,GO:0006432,GO:0006518,GO:0006520,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009328,GO:0009987,GO:0010467,GO:0016070,GO:0019538,GO:0019752,GO:0032991,GO:0034641,GO:0034645,GO:0034660,GO:0043038,GO:0043039,GO:0043043,GO:0043170,GO:0043436,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044281,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0071704,GO:0090304,GO:1901360,GO:1901564,GO:1901566,GO:1901576,GO:1902494 6.1.1.20 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004231 505.0
DYD1_k127_1756883_0 Prolyl endopeptidase K01322 GO:0005575,GO:0005623,GO:0042597,GO:0044464 3.4.21.26 0.0 1360.0
DYD1_k127_1756883_1 Catalyzes the NADPH-dependent formation of L-aspartate- semialdehyde (L-ASA) by the reductive dephosphorylation of L- aspartyl-4-phosphate K00133 - 1.2.1.11 7.617e-209 651.0
DYD1_k127_1756883_2 Catalyzes the interconversion of L-alanine and D- alanine. May also act on other amino acids K01775,K01929 - 5.1.1.1,6.3.2.10 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005183 561.0
DYD1_k127_1756883_3 Thymidine kinase K00857 GO:0003674,GO:0003824,GO:0004797,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006139,GO:0006213,GO:0006259,GO:0006725,GO:0006753,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009116,GO:0009117,GO:0009120,GO:0009123,GO:0009124,GO:0009157,GO:0009162,GO:0009165,GO:0009987,GO:0016301,GO:0016310,GO:0016740,GO:0016772,GO:0018130,GO:0019136,GO:0019205,GO:0019206,GO:0019438,GO:0019637,GO:0034641,GO:0034654,GO:0043170,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044271,GO:0044281,GO:0044424,GO:0044444,GO:0044464,GO:0046104,GO:0046125,GO:0046483,GO:0055086,GO:0071704,GO:0072527,GO:0090304,GO:0090407,GO:1901135,GO:1901293,GO:1901360,GO:1901362,GO:1901564,GO:1901576,GO:1901657 2.7.1.21 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006286 391.0
DYD1_k127_1756883_4 - - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000003815 288.0
DYD1_k127_1756883_5 Channel that opens in response to stretch forces in the membrane lipid bilayer. May participate in the regulation of osmotic pressure changes within the cell K03282 - - 0.000000000000000000000000000000000000000000000000000000000000000000002732 237.0
DYD1_k127_1762436_0 Lytic murein transglycosylase K08307 - - 1.468e-287 890.0
DYD1_k127_1762436_1 Belongs to the phosphoglycerate kinase family K00927 - 2.7.2.3 7.994e-230 716.0
DYD1_k127_1762436_2 Domain of unknown function (DUF4837) - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001062 577.0
DYD1_k127_1762436_3 Belongs to the ompA family - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003311 440.0
DYD1_k127_1762436_4 DNA polymerase III K02341 - 2.7.7.7 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001602 420.0
DYD1_k127_1762436_5 - - - - 0.00000000000000000000000126 103.0
DYD1_k127_176738_0 homoserine dehydrogenase K12524 - 1.1.1.3,2.7.2.4 0.0 1967.0
DYD1_k127_176738_1 Catalyzes the formation of L-homocysteine from O- succinyl-L-homoserine (OSHS) and hydrogen sulfide K01740 - 2.5.1.49 9.817e-222 689.0
DYD1_k127_176738_2 GIY-YIG catalytic domain K07461 - - 0.000000000000000000000000003533 111.0
DYD1_k127_177995_0 Metallo-peptidase family M12B Reprolysin-like - - - 0.0 1601.0
DYD1_k127_177995_1 The natural substrate for this enzyme may be peptidyl- tRNAs which drop off the ribosome during protein synthesis K01056 GO:0003674,GO:0003824,GO:0004045,GO:0016787,GO:0016788,GO:0052689,GO:0140098,GO:0140101 3.1.1.29 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000379 376.0
DYD1_k127_177995_2 cellulase activity - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009935 352.0
DYD1_k127_177995_3 This is one of the proteins that binds to the 5S RNA in the ribosome where it forms part of the central protuberance K02897 GO:0003674,GO:0003676,GO:0003723,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0006412,GO:0006518,GO:0006807,GO:0008097,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0015934,GO:0019538,GO:0019843,GO:0022625,GO:0022626,GO:0032991,GO:0034641,GO:0034645,GO:0043043,GO:0043170,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:0071704,GO:0097159,GO:1901363,GO:1901564,GO:1901566,GO:1901576,GO:1990904 - 0.0000000000000000000000000000000000000000001599 160.0
DYD1_k127_1780754_0 Catalyzes the anaerobic formation of alpha-ketobutyrate and ammonia from threonine in a two-step reaction. The first step involved a dehydration of threonine and a production of enamine intermediates (aminocrotonate), which tautomerizes to its imine form (iminobutyrate). Both intermediates are unstable and short- lived. The second step is the nonenzymatic hydrolysis of the enamine imine intermediates to form 2-ketobutyrate and free ammonia. In the low water environment of the cell, the second step is accelerated by RidA K01754 - 4.3.1.19 1.361e-240 746.0
DYD1_k127_1780754_1 Aldehyde dehydrogenase K00131 - 1.2.1.9 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004008 569.0
DYD1_k127_1790197_0 Part of the outer membrane protein assembly complex, which is involved in assembly and insertion of beta-barrel proteins into the outer membrane - - - 7.345e-280 872.0
DYD1_k127_1790197_1 Endonuclease that specifically degrades the RNA of RNA- DNA hybrids K03470 GO:0003674,GO:0003824,GO:0004518,GO:0004519,GO:0004521,GO:0004523,GO:0004540,GO:0005575,GO:0005622,GO:0005623,GO:0006139,GO:0006259,GO:0006260,GO:0006261,GO:0006271,GO:0006273,GO:0006281,GO:0006298,GO:0006401,GO:0006725,GO:0006807,GO:0006950,GO:0006974,GO:0008150,GO:0008152,GO:0009056,GO:0009057,GO:0009058,GO:0009059,GO:0009987,GO:0016070,GO:0016787,GO:0016788,GO:0016891,GO:0016893,GO:0019439,GO:0022616,GO:0032299,GO:0032991,GO:0033554,GO:0033567,GO:0034641,GO:0034645,GO:0034655,GO:0043137,GO:0043170,GO:0044237,GO:0044238,GO:0044248,GO:0044249,GO:0044260,GO:0044265,GO:0044270,GO:0044424,GO:0044464,GO:0046483,GO:0046700,GO:0050896,GO:0051716,GO:0071704,GO:0090304,GO:0090305,GO:0090501,GO:0090502,GO:0140098,GO:1901360,GO:1901361,GO:1901575,GO:1901576 3.1.26.4 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007045 354.0
DYD1_k127_1790197_2 TonB-dependent receptor plug - - - 0.000000000000000000000000000000007439 127.0
DYD1_k127_1808575_0 COG1506 Dipeptidyl aminopeptidases acylaminoacyl-peptidases - - - 2.281e-286 880.0
DYD1_k127_1808575_1 glycosyl hydrolase of K09955 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006175 479.0
DYD1_k127_1811095_0 - catabolite gene activator and regulatory subunit of cAMP-dependent protein - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001531 312.0
DYD1_k127_1811095_1 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily K01759,K03827 - 4.4.1.5 0.000000000000000000000000000000000000000000000000000000000000000001955 229.0
DYD1_k127_1811095_2 Cupin 2, conserved barrel domain protein - - - 0.00000000000000000000000000000000000000000000000000000000000005221 214.0
DYD1_k127_1811095_3 Cytochrome c - - - 0.00000000000000000000000000000000000000000000000000000000000437 215.0
DYD1_k127_1811095_4 Belongs to the ompA family K03286 - - 0.000000000000000000000000000000000000000000000000000007071 201.0
DYD1_k127_1817352_0 Alpha-L-fucosidase K01206 - 3.2.1.51 1.153e-263 816.0
DYD1_k127_1817352_1 2-keto-4-pentenoate hydratase 2-oxohepta-3-ene-1,7-dioic acid hydratase - - - 0.00000000000000000000000000000000000000000000000000000000000000002306 229.0
DYD1_k127_1830125_0 (twin-arginine translocation) pathway signal - - - 0.0 1105.0
DYD1_k127_1830125_1 Protein of unknown function (DUF1800) - - - 7.505e-203 637.0
DYD1_k127_1830125_2 aspartate kinase activity - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000606 417.0
DYD1_k127_1830125_3 Is required not only for elongation of protein synthesis but also for the initiation of all mRNA translation through initiator tRNA(fMet) aminoacylation K01874 GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006082,GO:0006139,GO:0006399,GO:0006412,GO:0006418,GO:0006518,GO:0006520,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0016070,GO:0019538,GO:0019752,GO:0034641,GO:0034645,GO:0034660,GO:0043038,GO:0043039,GO:0043043,GO:0043170,GO:0043436,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044281,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0071704,GO:0090304,GO:1901360,GO:1901564,GO:1901566,GO:1901576 6.1.1.10 0.00000000000000000000000000000000000000000000001242 171.0
DYD1_k127_1830125_4 Belongs to the UPF0102 family K07460 - - 0.00000000000000000000000000000000000000000007671 162.0
DYD1_k127_1830125_5 Protein of unknown function (DUF1800) - - - 0.0000000000000000000000000000000000000001062 152.0
DYD1_k127_1831201_0 Metalloenzyme superfamily - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000183 589.0
DYD1_k127_1831201_1 metallophosphoesterase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003886 503.0
DYD1_k127_1831201_2 CRP FNR family transcriptional regulator K01420 - - 0.00006547 45.0
DYD1_k127_1837823_0 Pfam Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase - - - 3.5e-323 996.0
DYD1_k127_1837823_1 GlcNAc-PI de-N-acetylase K01463 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001078 451.0
DYD1_k127_1841900_0 penicillin-binding protein K05515 - 3.4.16.4 0.0 1184.0
DYD1_k127_1841900_1 Cell cycle protein K05837 - - 0.0000000000000000004149 89.0
DYD1_k127_1846897_0 An AccC homodimer forms the biotin carboxylase subunit of the acetyl CoA carboxylase, an enzyme that catalyzes the formation of malonyl-CoA, which in turn controls the rate of fatty acid metabolism K01961 - 6.3.4.14,6.4.1.2 6.986e-298 914.0
DYD1_k127_1846897_1 Catalyzes the condensation reaction of fatty acid synthesis by the addition to an acyl acceptor of two carbons from malonyl-ACP. Catalyzes the first condensation reaction which initiates fatty acid synthesis and may therefore play a role in governing the total rate of fatty acid production. Possesses both acetoacetyl-ACP synthase and acetyl transacylase activities. Its substrate specificity determines the biosynthesis of branched- chain and or straight-chain of fatty acids K00648 GO:0003674,GO:0003824,GO:0006082,GO:0006629,GO:0006631,GO:0008150,GO:0008152,GO:0009987,GO:0016740,GO:0016746,GO:0016747,GO:0019752,GO:0032787,GO:0033818,GO:0043436,GO:0044237,GO:0044238,GO:0044255,GO:0044281,GO:0071704 2.3.1.180 1.411e-207 647.0
DYD1_k127_1846897_2 Belongs to the PdxA family K00097 - 1.1.1.262 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005277 517.0
DYD1_k127_1846897_3 DNA-binding protein - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002098 338.0
DYD1_k127_1846897_4 first, biotin carboxylase catalyzes the carboxylation of the carrier protein and then the transcarboxylase transfers the carboxyl group to form malonyl-CoA K02160 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000001962 253.0
DYD1_k127_1846897_5 Belongs to the bacterial ribosomal protein bL32 family K02911 - - 0.000000000000000000000000000000000002845 137.0
DYD1_k127_1856976_0 Carboxypeptidase - - - 2.742e-231 720.0
DYD1_k127_1856976_1 cheY-homologous receiver domain - - - 0.00000000000000000000000000000000000000000000000000001431 190.0
DYD1_k127_1863062_0 ISXO2-like transposase domain - - - 1.371e-197 616.0
DYD1_k127_1863062_1 Type IV secretory pathway VirD4 - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000005768 314.0
DYD1_k127_1863062_2 - - - - 0.000000000000000000000000000000000000000000000000000000000000000000171 243.0
DYD1_k127_1863062_3 - - - - 0.00000000000000000000000000000000000000000000000000002294 193.0
DYD1_k127_1863062_4 Transcriptional regulator, AbiEi antitoxin, Type IV TA system - - - 0.00000000000000000000000000000000000000000000003239 183.0
DYD1_k127_1863062_5 Protein conserved in bacteria - - - 0.00000000000000001963 93.0
DYD1_k127_187261_0 ATP-grasp domain K01955 - 6.3.5.5 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001876 460.0
DYD1_k127_187261_1 Sugar o-acyltransferase, sialic acid o-acetyltransferase neud family - - - 0.0000000000000000000000000000000000000189 147.0
DYD1_k127_1875427_0 This protein is involved in the repair of mismatches in DNA. It is required for dam-dependent methyl-directed DNA mismatch repair. May act as a molecular matchmaker , a protein that promotes the formation of a stable complex between two or more DNA-binding proteins in an ATP-dependent manner without itself being part of a final effector complex K03572 - - 0.0 1086.0
DYD1_k127_1875427_1 Rhomboid family - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001623 490.0
DYD1_k127_1875427_2 Rhomboid family K09650 - 3.4.21.105 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007583 480.0
DYD1_k127_1875427_3 COG0457 FOG TPR repeat - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000265 465.0
DYD1_k127_1875427_4 it is required for DNA replication and normal SOS inducibility. RecF binds preferentially to single-stranded, linear DNA. It also seems to bind ATP K03629 GO:0000731,GO:0006139,GO:0006259,GO:0006281,GO:0006302,GO:0006725,GO:0006807,GO:0006950,GO:0006974,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0018130,GO:0019438,GO:0033554,GO:0034641,GO:0034645,GO:0034654,GO:0043170,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044271,GO:0046483,GO:0050896,GO:0051716,GO:0071704,GO:0071897,GO:0090304,GO:1901360,GO:1901362,GO:1901576 - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001328 364.0
DYD1_k127_1875427_5 Catalyzes the formation of 6,7-dimethyl-8- ribityllumazine by condensation of 5-amino-6-(D- ribitylamino)uracil with 3,4-dihydroxy-2-butanone 4-phosphate. This is the penultimate step in the biosynthesis of riboflavin K00794 - 2.5.1.78 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000006254 291.0
DYD1_k127_1875427_6 - - - - 0.000000000000000000000000000000000000000000002829 165.0
DYD1_k127_1875427_7 Endonuclease Exonuclease phosphatase - - - 0.00000000002037 66.0
DYD1_k127_1889580_0 7TM-HD extracellular K07037 - - 7.607e-283 883.0
DYD1_k127_1889580_1 Belongs to the 'phage' integrase family - - - 1.041e-223 698.0
DYD1_k127_1889580_2 Catalyzes the synthesis of acetoacetyl coenzyme A from two molecules of acetyl coenzyme A. It can also act as a thiolase, catalyzing the reverse reaction and generating two-carbon units from the four-carbon product of fatty acid oxidation K00626 - 2.3.1.9 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001397 597.0
DYD1_k127_1889580_3 Nucleotidyl transferase AbiEii toxin, Type IV TA system - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005972 434.0
DYD1_k127_1889580_4 Belongs to the ParB family K03497 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006512 416.0
DYD1_k127_1889580_6 transcriptional regulator - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002277 394.0
DYD1_k127_1889580_7 Belongs to the ParB family K03497 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000002224 297.0
DYD1_k127_1889580_8 recombinase activity - - - 0.00000000000000000000000001046 115.0
DYD1_k127_1889958_0 The pyruvate dehydrogenase complex catalyzes the overall conversion of pyruvate to acetyl-CoA and CO(2) K00627 - 2.3.1.12 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003493 502.0
DYD1_k127_1889958_1 Peptidase m28 - - - 0.0000000000000000000000000000000000000000000000000000000000000007003 226.0
DYD1_k127_1917384_0 domain protein - - - 1.24e-216 695.0
DYD1_k127_1917384_1 Transporter - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003192 368.0
DYD1_k127_1917384_2 membrane protein, hemolysin III homolog K11068 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008403 343.0
DYD1_k127_1917384_3 Tripartite ATP-independent periplasmic transporter, DctM component - - - 0.0000000000000000000000000000000000000000000000000000008569 193.0
DYD1_k127_1917384_4 Belongs to the methyltransferase superfamily K07444 - - 0.00000000000000000000000000000000000000000000000000572 181.0
DYD1_k127_1919201_0 PDZ domain (Also known as DHR or GLGF) - - - 6.451e-240 747.0
DYD1_k127_1919201_1 Protein of unknown function (DUF1573) - - - 0.00000000000000000000000000000000000000000000000000000000000000000000004267 242.0
DYD1_k127_1919201_2 Catalyzes the formation of oxalozcetate and L-glutamate from L-aspartate and 2-oxoglutarate K00812,K14260 - 2.6.1.1,2.6.1.2,2.6.1.66 0.000000000000000000000000000000000000000000000005428 173.0
DYD1_k127_1923009_0 COG1541 Coenzyme F390 synthetase K01912 - 6.2.1.30 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002561 334.0
DYD1_k127_1923009_1 - - - - 0.00000000000000000000000000003695 119.0
DYD1_k127_1929426_0 Domain of unknown function (DUF4957) K01729 - 4.2.2.3 0.0 1030.0
DYD1_k127_1929426_1 Alginate lyase K20525 - 4.2.2.26 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000001067 286.0
DYD1_k127_19417_0 Zinc-binding dehydrogenase K02030,K03810 - - 0.0 1201.0
DYD1_k127_1952517_0 membrane protein TerC K05794 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006201 496.0
DYD1_k127_1952517_1 Sigma-70, region 4 K03088 - - 0.0000000000000000000000000000000000000000000000000000000003594 209.0
DYD1_k127_1952517_2 iron ion homeostasis - - - 0.00000000000000000000204 99.0
DYD1_k127_1952517_3 - - - - 0.00000000000000004007 83.0
DYD1_k127_1952517_4 Catalyzes the cleavage of glutathione into 5-oxo-L- proline and a Cys-Gly dipeptide. Acts specifically on glutathione, but not on other gamma-glutamyl peptides - - - 0.0006281 49.0
DYD1_k127_1960324_0 C-terminal domain of CHU protein family - - - 0.0 1155.0
DYD1_k127_1960324_1 Catalyzes a two-step reaction, first charging a glutamine molecule by linking its carboxyl group to the alpha-phosphate of ATP, followed by transfer of the aminoacyl-adenylate to its tRNA K01886 - 6.1.1.18 1.432e-293 903.0
DYD1_k127_1960324_2 Type IX secretion system membrane protein PorP/SprF - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001026 415.0
DYD1_k127_198372_0 O-methyltransferase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000789 443.0
DYD1_k127_198372_2 Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family - - - 0.0000000000000000000001808 98.0
DYD1_k127_198372_3 Short-chain dehydrogenase reductase sdr K00059 - 1.1.1.100 0.000008409 48.0
DYD1_k127_1995075_0 Alpha amylase, catalytic domain K05341 - 2.4.1.4 7.215e-295 909.0
DYD1_k127_1995075_1 Sugar kinases, ribokinase family K00847 - 2.7.1.4 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004052 523.0
DYD1_k127_1995075_2 Diadenosine tetraphosphatase and related serine threonine protein phosphatases K07313 - 3.1.3.16 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002238 438.0
DYD1_k127_1995075_3 fatty acid desaturase K03921 - 1.14.19.11,1.14.19.2,1.14.19.26 0.000000000000000000000000000000000000007561 146.0
DYD1_k127_2004649_0 Pfam Peptidase family M48 - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000253 469.0
DYD1_k127_2004649_1 D-alanyl-D-alanine carboxypeptidase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002135 425.0
DYD1_k127_2004649_2 Ankyrin repeat - - - 0.000000000000000000000000000000000000000000000085 171.0
DYD1_k127_2004649_3 C-terminal domain of CHU protein family - - - 0.00000000000000000000000002345 108.0
DYD1_k127_2004649_4 - - - - 0.0000000000000000000000000845 106.0
DYD1_k127_2004649_5 Catalyzes the interconversion of 2-phosphoglycerate and 3-phosphoglycerate K15633 - 5.4.2.12 0.000000000003005 66.0
DYD1_k127_201097_0 G-rich domain on putative tyrosine kinase - - - 2.931e-275 867.0
DYD1_k127_201097_1 Pfam Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase - - - 1.642e-209 657.0
DYD1_k127_201097_2 COG4464 Capsular polysaccharide biosynthesis protein K01104 - 3.1.3.48 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002706 362.0
DYD1_k127_201097_3 Periplasmic protein involved in polysaccharide export K01991 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001224 328.0
DYD1_k127_201097_4 COGs COG0745 Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain - - - 0.00000000000001558 74.0
DYD1_k127_2019548_0 Catalyzes the transfer of a methyl group from 5- methyltetrahydrofolate to homocysteine resulting in methionine formation K00549 - 2.1.1.14 0.0 1044.0
DYD1_k127_2019548_1 PAS domain - - - 0.00000000000000000000000000000000000000000000000000000000006201 208.0
DYD1_k127_2019548_2 PFAM thioesterase superfamily - - - 0.00000000000000000000000000000000000000000000000000001945 190.0
DYD1_k127_2019548_3 Cysteine-rich CWC - - - 0.000000000000000000000001097 105.0
DYD1_k127_202579_0 Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family K03296,K18138 - - 0.0 1129.0
DYD1_k127_202579_1 PFAM Outer membrane efflux protein - - - 0.0000001626 53.0
DYD1_k127_2051906_0 alkyl hydroperoxide reductase Thiol specific antioxidant Mal allergen - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005227 547.0
DYD1_k127_2051906_1 Has lipid A 3-O-deacylase activity. Hydrolyzes the ester bond at the 3 position of lipid A, a bioactive component of lipopolysaccharide (LPS), thereby releasing the primary fatty acyl moiety - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006256 321.0
DYD1_k127_2051906_2 FAD linked K06911 - - 0.0000000000000000000000000000000000226 143.0
DYD1_k127_2067833_0 The UvrABC repair system catalyzes the recognition and processing of DNA lesions. UvrC both incises the 5' and 3' sides of the lesion. The N-terminal half is responsible for the 3' incision and the C-terminal half is responsible for the 5' incision K03703 GO:0005575,GO:0005622,GO:0005623,GO:0006950,GO:0006974,GO:0008150,GO:0009380,GO:0009987,GO:0032991,GO:0033554,GO:0044424,GO:0044464,GO:0050896,GO:0051716,GO:1902494,GO:1905347,GO:1905348,GO:1990391 - 2.437e-286 883.0
DYD1_k127_2067833_1 amino acids such as valine, to avoid such errors it has two additional distinct tRNA(Ile)-dependent editing activities. One activity is designated as 'pretransfer' editing and involves the hydrolysis of activated Val-AMP. The other activity is designated 'posttransfer' editing and involves deacylation of mischarged Val-tRNA(Ile) K01870 GO:0003674,GO:0003824,GO:0004812,GO:0004822,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006082,GO:0006139,GO:0006399,GO:0006412,GO:0006418,GO:0006428,GO:0006518,GO:0006520,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0016070,GO:0016874,GO:0016875,GO:0019538,GO:0019752,GO:0034641,GO:0034645,GO:0034660,GO:0043038,GO:0043039,GO:0043043,GO:0043170,GO:0043436,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044281,GO:0044424,GO:0044464,GO:0046483,GO:0071704,GO:0090304,GO:0140098,GO:0140101,GO:1901360,GO:1901564,GO:1901566,GO:1901576 6.1.1.5 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002141 475.0
DYD1_k127_2067833_2 This protein specifically catalyzes the removal of signal peptides from prolipoproteins K03101 - 3.4.23.36 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006074 402.0
DYD1_k127_2067833_3 - - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003876 316.0
DYD1_k127_2067833_4 Molecular chaperone DnaK - - - 0.000000000000000000000000000000000000000000000000000000000000000000009904 234.0
DYD1_k127_2067833_5 5-formyltetrahydrofolate cyclo-ligase family K01934 - 6.3.3.2 0.0000000000000000000000000000000000000000000000000000000000000002145 225.0
DYD1_k127_2072156_0 Participates in both transcription termination and antitermination K02600 - - 4.923e-256 790.0
DYD1_k127_2072156_1 C-type lectin (CTL) or carbohydrate-recognition domain (CRD) - - - 1.922e-198 626.0
DYD1_k127_2072156_2 C-type lectin (CTL) or carbohydrate-recognition domain (CRD) - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007371 362.0
DYD1_k127_2072156_3 Required for maturation of 30S ribosomal subunits K09748 GO:0000028,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006412,GO:0006518,GO:0006807,GO:0006996,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0016043,GO:0019538,GO:0022607,GO:0022613,GO:0022618,GO:0034622,GO:0034641,GO:0034645,GO:0042254,GO:0042255,GO:0042274,GO:0043043,GO:0043170,GO:0043603,GO:0043604,GO:0043933,GO:0044085,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044424,GO:0044444,GO:0044464,GO:0065003,GO:0070925,GO:0071704,GO:0071826,GO:0071840,GO:1901564,GO:1901566,GO:1901576 - 0.000000000000000000000000000000000000000000000000000000000000000000000000001023 256.0
DYD1_k127_2072156_4 One of the essential components for the initiation of protein synthesis. Protects formylmethionyl-tRNA from spontaneous hydrolysis and promotes its binding to the 30S ribosomal subunits. Also involved in the hydrolysis of GTP during the formation of the 70S ribosomal complex K02519 - - 0.000000000000000000000005782 101.0
DYD1_k127_2073222_0 NAD-binding protein involved in the addition of a carboxymethylaminomethyl (cmnm) group at the wobble position (U34) of certain tRNAs, forming tRNA-cmnm(5)s(2)U34 K03495 GO:0000166,GO:0001510,GO:0002097,GO:0002098,GO:0003674,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006139,GO:0006396,GO:0006399,GO:0006400,GO:0006725,GO:0006807,GO:0008033,GO:0008150,GO:0008152,GO:0009451,GO:0009987,GO:0010467,GO:0016070,GO:0030488,GO:0032259,GO:0034470,GO:0034641,GO:0034660,GO:0036094,GO:0043167,GO:0043168,GO:0043170,GO:0043412,GO:0043414,GO:0044237,GO:0044238,GO:0044260,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0048037,GO:0050660,GO:0050662,GO:0071704,GO:0090304,GO:0097159,GO:1901265,GO:1901360,GO:1901363 - 0.0 1161.0
DYD1_k127_2073222_1 ATPase involved in DNA repair - - - 0.0 1140.0
DYD1_k127_2073222_2 Methyltransferase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001744 430.0
DYD1_k127_2073222_3 outer membrane chaperone Skp (OmpH) K06142 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000002159 258.0
DYD1_k127_2073222_4 - - - - 0.00000000000000000000000000000000000000000000000000000000000000000684 226.0
DYD1_k127_2073222_5 Single strand-specific metallo-endoribonuclease involved in late-stage 70S ribosome quality control and in maturation of the 3' terminus of the 16S rRNA - - - 0.0000000000000000000000000000000000000000004911 161.0
DYD1_k127_2073222_6 - - - - 0.00000000000000004562 88.0
DYD1_k127_2086895_0 iron-regulated membrane protein - - - 3.223e-280 868.0
DYD1_k127_2086895_1 Domain of unknown function (DUF4198) - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002512 426.0
DYD1_k127_2086895_2 membrane - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000323 295.0
DYD1_k127_2086895_3 Domain of unknown function (DU1801) - - - 0.00000000000000000000000000000000000000000000000000000000000001162 216.0
DYD1_k127_2086895_4 - - - - 0.00000000000000000000000000000000000000000000000007913 178.0
DYD1_k127_2086895_5 Inner membrane protein CreD K06143 - - 0.0000000000000000000000000000000000000000000004953 169.0
DYD1_k127_2086895_6 transcriptional regulator - - - 0.00000000000000000000000000000000000000009362 152.0
DYD1_k127_2086895_7 - - - - 0.0000000000000000000000000000000007626 133.0
DYD1_k127_2087353_0 Reductase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008767 522.0
DYD1_k127_2087353_1 peptidase M23 - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001226 389.0
DYD1_k127_2087353_2 thioesterase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001447 312.0
DYD1_k127_2087353_3 Has lipid A 3-O-deacylase activity. Hydrolyzes the ester bond at the 3 position of lipid A, a bioactive component of lipopolysaccharide (LPS), thereby releasing the primary fatty acyl moiety - - - 0.000000000185 70.0
DYD1_k127_2087353_4 - - - - 0.0001782 52.0
DYD1_k127_2097654_0 - - - - 0.0000000000000000000000000000000003911 138.0
DYD1_k127_2097654_1 Histidine kinase - - - 0.000000000000000000001561 95.0
DYD1_k127_2107895_0 Outer membrane receptor K16087 - - 0.0 1406.0
DYD1_k127_2107895_1 Belongs to the Glu Leu Phe Val dehydrogenases family K00262 - 1.4.1.4 5.051e-280 863.0
DYD1_k127_2107895_2 cystathionine K01739,K01758,K01760 - 2.5.1.48,4.4.1.1,4.4.1.8 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002951 405.0
DYD1_k127_2107895_3 Involved in DNA repair and RecF pathway recombination K03584 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001539 404.0
DYD1_k127_2116935_0 AraC family - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006426 553.0
DYD1_k127_2116935_1 PFAM Trehalose utilisation K08738,K09992 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001841 402.0
DYD1_k127_2116935_2 Protein of unknown function (DUF1460) - - - 0.000000000000000000000000000000000000000000000000000000000000000000327 232.0
DYD1_k127_2118955_0 Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released K03086 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009379 299.0
DYD1_k127_2118955_1 Histidine kinase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000001467 263.0
DYD1_k127_2118955_3 - - - - 0.00000000002243 66.0
DYD1_k127_2119606_0 ABC-type antimicrobial peptide transport system, permease component K02004 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001334 557.0
DYD1_k127_2119606_1 Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family K02005 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002322 522.0
DYD1_k127_2119606_2 ATPases associated with a variety of cellular activities K02003 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001949 369.0
DYD1_k127_2131008_0 hydrolase of the alpha beta superfamily K07017 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001151 574.0
DYD1_k127_2131008_1 integral membrane protein K07027 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001223 560.0
DYD1_k127_2131008_2 Catalyzes the condensation of pantoate with beta-alanine in an ATP-dependent reaction via a pantoyl-adenylate intermediate K01918 GO:0003674,GO:0003824,GO:0004592,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006082,GO:0006520,GO:0006573,GO:0006575,GO:0006732,GO:0006766,GO:0006767,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009081,GO:0009108,GO:0009110,GO:0009987,GO:0015939,GO:0015940,GO:0016053,GO:0016874,GO:0016879,GO:0016881,GO:0019752,GO:0032787,GO:0033317,GO:0034641,GO:0042364,GO:0042398,GO:0043436,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0044283,GO:0044424,GO:0044444,GO:0044464,GO:0046394,GO:0051186,GO:0051188,GO:0071704,GO:0072330,GO:1901564,GO:1901566,GO:1901576,GO:1901605 6.3.2.1 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001097 411.0
DYD1_k127_2131008_3 Catalyzes the pyruvoyl-dependent decarboxylation of aspartate to produce beta-alanine K01579 - 4.1.1.11 0.0000000000000000000000000000000000000000000000000000000000000000007336 228.0
DYD1_k127_2143705_0 protein (some members contain a von Willebrand factor type A (vWA) domain) - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001124 548.0
DYD1_k127_2143705_1 DNA polymerase K02337 - 2.7.7.7 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001801 492.0
DYD1_k127_2143705_2 Belongs to the ompA family K03286 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001086 379.0
DYD1_k127_2143705_3 Belongs to the thioredoxin family K03671 - - 0.0000000000000000000000000000000000000000000000000000000000001359 213.0
DYD1_k127_2143705_4 Tetratricopeptide repeat - - - 0.00000000000000000000000000000000000000000000000000000001242 204.0
DYD1_k127_2143705_5 Has lipid A 3-O-deacylase activity. Hydrolyzes the ester bond at the 3 position of lipid A, a bioactive component of lipopolysaccharide (LPS), thereby releasing the primary fatty acyl moiety - - - 0.00000000000000000000000000000000000000000000001435 175.0
DYD1_k127_2143705_6 - - - - 0.000000000000000000000000000000000000003848 158.0
DYD1_k127_2143705_7 - - - - 0.000000001652 62.0
DYD1_k127_2149329_0 Domain of unknown function (DUF4301) - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004436 598.0
DYD1_k127_2149329_1 Belongs to the P-Pant transferase superfamily - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000219 396.0
DYD1_k127_2149329_2 nicotinamide mononucleotide transporter K03811 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008089 392.0
DYD1_k127_2149329_3 AAA domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000001017 282.0
DYD1_k127_2149329_4 May play a key role in the regulation of the intracellular concentration of adenosylhomocysteine K01251 GO:0000096,GO:0003674,GO:0003824,GO:0004013,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006082,GO:0006139,GO:0006520,GO:0006534,GO:0006555,GO:0006575,GO:0006725,GO:0006732,GO:0006790,GO:0006807,GO:0008150,GO:0008152,GO:0009066,GO:0009069,GO:0009116,GO:0009119,GO:0009987,GO:0016787,GO:0016801,GO:0016802,GO:0017144,GO:0019752,GO:0033353,GO:0034641,GO:0042278,GO:0043436,GO:0044237,GO:0044238,GO:0044281,GO:0044424,GO:0044444,GO:0044464,GO:0046128,GO:0046439,GO:0046483,GO:0046498,GO:0046500,GO:0051186,GO:0055086,GO:0071704,GO:0072521,GO:1901135,GO:1901360,GO:1901564,GO:1901605,GO:1901657 3.3.1.1 0.00000000000000000000000000000000000000000000000000000002922 196.0
DYD1_k127_2149329_5 YKOF-related Family - - - 0.000000000000004123 78.0
DYD1_k127_2166494_0 - - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003718 426.0
DYD1_k127_2166494_1 Conjugative transposon, TraM - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005525 314.0
DYD1_k127_2166494_2 Conjugative transposon TraK protein - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000005594 276.0
DYD1_k127_2166494_3 - - - - 0.00000000000000000000000000000000000000000000000000000000000000000000009281 247.0
DYD1_k127_2166494_4 Domain of unknown function (DUF4138) - - - 0.00000000000000000000000000000000000000000000000000000000001107 215.0
DYD1_k127_2166494_5 conjugation system ATPase, TraG family - - - 0.0006157 42.0
DYD1_k127_216660_0 Catalyzes the formation of the alpha-1,6-glucosidic linkages in glycogen by scission of a 1,4-alpha-linked oligosaccharide from growing alpha-1,4-glucan chains and the subsequent attachment of the oligosaccharide to the alpha-1,6 position K00700 - 2.4.1.18 0.0 1284.0
DYD1_k127_216660_1 Belongs to the glycosyl hydrolase 31 family K01187 - 3.2.1.20 0.0 1137.0
DYD1_k127_216660_2 - - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000142 336.0
DYD1_k127_216660_3 Conserved domain frequently associated with peptide methionine sulfoxide reductase K07305 - 1.8.4.12 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001327 302.0
DYD1_k127_216660_4 Protein of unknown function (DUF1572) - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000005084 276.0
DYD1_k127_216660_5 Peptide-methionine (R)-S-oxide reductase K07305 - 1.8.4.12 0.0000000000000000000000000000000000000000000000000000000000000000000000000000005855 271.0
DYD1_k127_217862_0 Glycosyl transferase family 2 - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002081 509.0
DYD1_k127_217862_1 UDP-galactopyranose mutase K01854 - 5.4.99.9 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004396 424.0
DYD1_k127_217862_2 Glycosyl transferase family 2 - - - 0.000005076 51.0
DYD1_k127_2183454_0 Gliding motility-associated ABC transporter ATP-binding subunit GldA K01990 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008441 535.0
DYD1_k127_2183454_1 COG2346 Truncated hemoglobins K06886 - - 0.0000000000000000000000000000000000000000000000000000000000009996 211.0
DYD1_k127_2183454_2 COG0076 Glutamate decarboxylase and related PLP-dependent - - - 0.0000000000000000000000000003745 115.0
DYD1_k127_2183454_3 Prephenate dehydratase K04518 - 4.2.1.51 0.0000000000000000000000006943 104.0
DYD1_k127_2195807_0 - K07004 - - 0.0 1628.0
DYD1_k127_2195807_1 DEAD DEAH box helicase K03724 - - 7.571e-307 943.0
DYD1_k127_2196617_0 Catalyzes the reversible interconversion of serine and glycine with tetrahydrofolate (THF) serving as the one-carbon carrier. This reaction serves as the major source of one-carbon groups required for the biosynthesis of purines, thymidylate, methionine, and other important biomolecules. Also exhibits THF- independent aldolase activity toward beta-hydroxyamino acids, producing glycine and aldehydes, via a retro-aldol mechanism K00600 - 2.1.2.1 3.034e-261 809.0
DYD1_k127_2196617_1 Tetratricopeptide repeat - - - 3.668e-225 701.0
DYD1_k127_2196617_2 Part of a stress-induced multi-chaperone system, it is involved in the recovery of the cell from heat-induced damage, in cooperation with DnaK, DnaJ and GrpE K03695 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002726 349.0
DYD1_k127_2196617_3 COG2197 Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002043 331.0
DYD1_k127_2196617_4 - - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000002442 255.0
DYD1_k127_2196617_5 general stress protein - - - 0.00000000000000000000000000000000000000000000000000007141 188.0
DYD1_k127_2198551_0 Doxx family - - - 0.0000000000000000000000000000000000000000000000000000000000000000005145 232.0
DYD1_k127_2198551_1 MarR family transcriptional regulator - - - 0.00000000000000000000000000000000000000000000000000000000000000009271 223.0
DYD1_k127_2198551_2 TonB-dependent receptor - - - 0.000000000000000000000000000000000000000000001124 166.0
DYD1_k127_221553_0 Catalyzes the NADPH-dependent reduction of L-glutamate 5-phosphate into L-glutamate 5-semialdehyde and phosphate. The product spontaneously undergoes cyclization to form 1-pyrroline-5- carboxylate K00147 GO:0003674,GO:0003824,GO:0004350,GO:0008150,GO:0008152,GO:0016491,GO:0016620,GO:0016903,GO:0055114 1.2.1.41 4.04e-224 699.0
DYD1_k127_221553_1 Belongs to the ompA family - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000003016 287.0
DYD1_k127_221553_2 Domain of unknown function (DUF1508) K09946 - - 0.00000000000000000000000000000000000000000000000004966 179.0
DYD1_k127_221553_3 Catalyzes the transfer of a phosphate group to glutamate to form L-glutamate 5-phosphate K00931 - 2.7.2.11 0.000000000000000000000000000003619 119.0
DYD1_k127_2232327_0 Murein transglycosylase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006445 558.0
DYD1_k127_2232327_1 acetyltransferases and hydrolases with the alpha beta hydrolase fold - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004258 361.0
DYD1_k127_2232327_2 GCN5-related N-acetyl-transferase K06975 - - 0.0000000000000000000000000000000000000000000000000002043 185.0
DYD1_k127_2232327_3 2-methylthioadenine synthetase K18707 - 2.8.4.5 0.00000002225 55.0
DYD1_k127_2251027_0 porT protein - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000016 447.0
DYD1_k127_2251027_1 Methyltransferase required for the conversion of demethylmenaquinol (DMKH2) to menaquinol (MKH2) K03183 - 2.1.1.163,2.1.1.201 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001889 426.0
DYD1_k127_22560_0 Belongs to the major facilitator superfamily. Sugar transporter (TC 2.A.1.1) family - - - 4.961e-225 700.0
DYD1_k127_22560_1 - - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000345 324.0
DYD1_k127_22560_2 Sigma 54 modulation protein / S30EA ribosomal protein K05808 - - 0.000000000000000000000000000000000000000000000043 170.0
DYD1_k127_2257493_0 Organic solvent tolerance protein OstA - - - 0.0 1546.0
DYD1_k127_2257493_1 N-acetylglucosamine kinase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003335 562.0
DYD1_k127_2257493_2 Endoribonuclease L-PSP K09022 - 3.5.99.10 0.000000000000000000000000000000000000000000000000000000000002531 212.0
DYD1_k127_2257493_3 Belongs to the glyceraldehyde-3-phosphate dehydrogenase family K00134 - 1.2.1.12 0.000000000000000000000000000000000000000000000000001236 183.0
DYD1_k127_2257493_4 N-acetylmuramoyl-L-alanine amidase K01448 - 3.5.1.28 0.00004517 49.0
DYD1_k127_2300417_0 acyl-CoA oxidase K00232 - 1.3.3.6 0.0 1334.0
DYD1_k127_2300417_1 Putative auto-transporter adhesin, head GIN domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001125 419.0
DYD1_k127_2300417_2 The RuvA-RuvB complex in the presence of ATP renatures cruciform structure in supercoiled DNA with palindromic sequence, indicating that it may promote strand exchange reactions in homologous recombination. RuvAB is a helicase that mediates the Holliday junction migration by localized denaturation and reannealing K03551 - 3.6.4.12 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001364 307.0
DYD1_k127_2310436_0 Type IX secretion system membrane protein PorP/SprF - - - 3.569e-194 616.0
DYD1_k127_2310436_1 Catalyzes the methyl esterification of L-isoaspartyl residues in peptides and proteins that result from spontaneous decomposition of normal L-aspartyl and L-asparaginyl residues. It plays a role in the repair and or degradation of damaged proteins K00573 - 2.1.1.77 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002913 391.0
DYD1_k127_2310436_2 - - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001185 386.0
DYD1_k127_2310436_3 phosphoglycerate mutase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002054 314.0
DYD1_k127_2310436_4 the 2 termini fold to resemble tRNA(Ala) and it encodes a tag peptide , a short internal open reading frame. During trans-translation Ala- aminoacylated tmRNA acts like a tRNA, entering the A-site of stalled ribosomes, displacing the stalled mRNA. The ribosome then switches to translate the ORF on the tmRNA K03664 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000003334 278.0
DYD1_k127_2310436_5 transcriptional regulator - - - 0.0000000000000000000000000000000000000000000000000000008381 192.0
DYD1_k127_2310436_6 Oxidoreductase - - - 0.00000003208 59.0
DYD1_k127_2344698_0 Protein of unknown function (DUF541) K09807 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009578 381.0
DYD1_k127_2344698_1 CarboxypepD_reg-like domain - - - 0.00000000000000000000000000000000000000000000000000000001081 203.0
DYD1_k127_2344698_2 Belongs to the glycerate kinase type-1 family K00865 - 2.7.1.165 0.00000001223 57.0
DYD1_k127_2368703_0 amino acids such as threonine, to avoid such errors, it has a posttransfer editing activity that hydrolyzes mischarged Thr-tRNA(Val) in a tRNA-dependent manner K01873 GO:0003674,GO:0003824,GO:0004812,GO:0004832,GO:0006082,GO:0006139,GO:0006399,GO:0006412,GO:0006418,GO:0006438,GO:0006518,GO:0006520,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0016070,GO:0016874,GO:0016875,GO:0019538,GO:0019752,GO:0034641,GO:0034645,GO:0034660,GO:0043038,GO:0043039,GO:0043043,GO:0043170,GO:0043436,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044281,GO:0046483,GO:0071704,GO:0090304,GO:0140098,GO:0140101,GO:1901360,GO:1901564,GO:1901566,GO:1901576 6.1.1.9 0.0 1606.0
DYD1_k127_2371314_0 Belongs to the citrate synthase family K01647 - 2.3.3.1 2.79e-221 687.0
DYD1_k127_2371314_1 Cytochrome C biogenesis protein CcmF - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009575 557.0
DYD1_k127_2371314_2 protein conserved in bacteria containing a pentein-type domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006788 546.0
DYD1_k127_2371314_3 - - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000005157 258.0
DYD1_k127_2371314_4 COG2141 Coenzyme F420-dependent N5,N10-methylene tetrahydromethanopterin reductase and related flavin-dependent oxidoreductases - - - 0.00000000000000000000000000000000000000000000000000000001096 204.0
DYD1_k127_2382384_0 COG1228 Imidazolonepropionase and related - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001616 588.0
DYD1_k127_2382384_1 DoxX K15977 - - 0.00000000000000000000000000000008615 130.0
DYD1_k127_2382384_2 Peptidase m28 - - - 0.0000000911 59.0
DYD1_k127_239208_0 Major facilitator superfamily K06902 - - 5.429e-257 796.0
DYD1_k127_239208_1 Peptidase M48 - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002596 521.0
DYD1_k127_239208_2 Belongs to the glycosyl hydrolase 31 family K01187 - 3.2.1.20 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002321 507.0
DYD1_k127_239208_3 - - - - 0.00000000000000000000000000000000000000000000000005628 180.0
DYD1_k127_239208_4 (threonine) efflux protein - - - 0.0000000000000000007101 92.0
DYD1_k127_2400986_0 Histidine kinase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000008912 261.0
DYD1_k127_2400986_1 aminopeptidase activity - - - 0.0000000000000000000000000001267 126.0
DYD1_k127_2416631_0 Organic solvent tolerance protein OstA - - - 0.0 1037.0
DYD1_k127_2416631_1 Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family K00821 - 2.6.1.11,2.6.1.17 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001504 539.0
DYD1_k127_2416631_2 Belongs to the Dps family K04047 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000002828 282.0
DYD1_k127_2424553_0 Type IIA topoisomerase (DNA gyrase topo II topoisomerase IV) B subunit K02622 - - 0.0 1167.0
DYD1_k127_2424553_1 Belongs to the type II topoisomerase GyrA ParC subunit family K02621 - - 1.331e-233 723.0
DYD1_k127_2424553_2 ATPase that binds to both the 70S ribosome and the 50S ribosomal subunit in a nucleotide-independent manner K06942 - - 1.879e-219 682.0
DYD1_k127_2424553_3 EamA-like transporter family - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001039 489.0
DYD1_k127_2425547_0 COG2303 Choline dehydrogenase and related - - - 0.0 1037.0
DYD1_k127_2425547_1 Xylose isomerase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004713 323.0
DYD1_k127_2444184_0 Catalyzes the addition of meso-diaminopimelic acid to the nucleotide precursor UDP-N-acetylmuramoyl-L-alanyl-D-glutamate (UMAG) in the biosynthesis of bacterial cell-wall peptidoglycan K01928 - 6.3.2.13 6.31e-292 899.0
DYD1_k127_2444184_1 penicillin-binding protein K03587 - 3.4.16.4 4.147e-287 884.0
DYD1_k127_2444184_2 First step of the lipid cycle reactions in the biosynthesis of the cell wall peptidoglycan K01000 - 2.7.8.13 0.00000000000000000000000000000000000000000000008315 169.0
DYD1_k127_2453201_0 Glucosamine-6-phosphate isomerases/6-phosphogluconolactonase K02564 - 3.5.99.6 2.159e-234 732.0
DYD1_k127_2453201_1 Belongs to the sodium solute symporter (SSF) (TC 2.A.21) family - - - 1.893e-211 661.0
DYD1_k127_2459946_0 efflux transporter, outer membrane factor (OMF) lipoprotein, NodT family - - - 1.963e-272 842.0
DYD1_k127_2459946_1 MMPL family K03296 - - 1.306e-209 656.0
DYD1_k127_2468773_0 Calcineurin-like phosphoesterase - - - 0.0 1314.0
DYD1_k127_2475174_0 Phage envelope protein - - - 0.00000000000000000000000000000000000000000000000000001405 190.0
DYD1_k127_2475174_1 helix_turn_helix, Lux Regulon - - - 0.0000000000000000000000000000000000000000000000001095 187.0
DYD1_k127_2481789_0 related to 2-nitropropane dioxygenase K00459 - 1.13.12.16 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004325 569.0
DYD1_k127_2481789_1 hydrolase of the alpha beta-hydrolase fold K07019 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007785 546.0
DYD1_k127_2481789_2 META domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004977 359.0
DYD1_k127_2481789_3 - - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004623 333.0
DYD1_k127_2481789_4 PFAM Cytochrome c, class I - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000008476 282.0
DYD1_k127_2481789_5 - - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000008475 279.0
DYD1_k127_2481789_6 META domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000006571 238.0
DYD1_k127_2481789_7 - - - - 0.00000000000000000000000000000000000000000000000000001767 194.0
DYD1_k127_2493694_0 PFAM Bacterial transcription activator, effector binding domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001319 461.0
DYD1_k127_2493694_1 PAP2 superfamily - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007629 427.0
DYD1_k127_2493694_2 PFAM SMP-30 Gluconolaconase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000001684 263.0
DYD1_k127_2494512_0 esterase of the alpha-beta hydrolase superfamily K07001 - - 0.0 1307.0
DYD1_k127_2494512_1 Protein of unknown function (DUF3108) - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003492 462.0
DYD1_k127_2494512_2 Tryptophan 2,3-dioxygenase K00453 - 1.13.11.11 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004402 300.0
DYD1_k127_2494512_3 The UvrABC repair system catalyzes the recognition and processing of DNA lesions. UvrC both incises the 5' and 3' sides of the lesion. The N-terminal half is responsible for the 3' incision and the C-terminal half is responsible for the 5' incision K03703 GO:0005575,GO:0005622,GO:0005623,GO:0006950,GO:0006974,GO:0008150,GO:0009380,GO:0009987,GO:0032991,GO:0033554,GO:0044424,GO:0044464,GO:0050896,GO:0051716,GO:1902494,GO:1905347,GO:1905348,GO:1990391 - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000001447 284.0
DYD1_k127_2502759_0 D-mannonate dehydratase (UxuA) K01686 - 4.2.1.8 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007 569.0
DYD1_k127_2502759_1 Belongs to the glycosyl hydrolase 5 (cellulase A) family - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002189 469.0
DYD1_k127_2502759_2 Enoyl-(Acyl carrier protein) reductase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007508 359.0
DYD1_k127_2502759_3 Nudix hydrolase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002999 310.0
DYD1_k127_2506198_0 TonB dependent receptor - - - 0.0 1087.0
DYD1_k127_2506198_1 - - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005711 569.0
DYD1_k127_2506198_2 type I phosphodiesterase nucleotide pyrophosphatase - - - 0.0000000000000000000000000000000000000000000000000000000000000002059 224.0
DYD1_k127_2506211_0 Aldehyde K13877,K14519 - 1.2.1.26,1.2.1.4 9.1e-307 943.0
DYD1_k127_2506211_1 Glycine D-amino acid K00285 - 1.4.5.1 6.999e-225 702.0
DYD1_k127_2506211_2 Belongs to the proline racemase family K12658 - 5.1.1.8 1.201e-217 676.0
DYD1_k127_2506211_3 COG1506 Dipeptidyl aminopeptidases acylaminoacyl-peptidases - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002458 521.0
DYD1_k127_2506211_4 Belongs to the DapA family K01714,K21062 - 3.5.4.22,4.3.3.7 0.000000000000000000000000000000000000000000000000000000000000000000001163 239.0
DYD1_k127_2512798_0 aldo keto reductase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002936 475.0
DYD1_k127_2512798_1 transcriptional regulator, AraC - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001738 387.0
DYD1_k127_2512798_2 Nitroreductase family K10679 - 1.5.1.34 0.000000000000000000000000000000000000000000000000000000000000000000000000001327 258.0
DYD1_k127_2512798_3 Flavodoxin-like fold - - - 0.00000000000000000000000000000000000000000000000000000000121 206.0
DYD1_k127_2512798_4 PFAM helix-turn-helix HxlR type - - - 0.000000000000000000000000000000000000000000000001137 175.0
DYD1_k127_2512798_5 Antibiotic biosynthesis monooxygenase - - - 0.000000000000000000000009689 103.0
DYD1_k127_2512798_6 major facilitator superfamily - - - 0.00000000000001457 74.0
DYD1_k127_2540982_0 gliding motility protein - - - 0.0 1482.0
DYD1_k127_2540982_1 Integral membrane protein CcmA involved in cell shape determination - - - 0.000000000000000000000000000000000000000000000000000000000000000000008215 235.0
DYD1_k127_2540982_2 it plays a direct role in the translocation of protons across the membrane K02108 - - 0.000000000000000000000000000000000000000000000000000000000001352 211.0
DYD1_k127_2540982_4 Putative F0F1-ATPase subunit Ca2+/Mg2+ transporter - - - 0.000000000612 63.0
DYD1_k127_2545607_0 TonB-dependent receptor - - - 0.0 1281.0
DYD1_k127_2545607_1 Domain of unknown function (DUF4249) - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001904 380.0
DYD1_k127_2545607_2 Belongs to the sigma-70 factor family. ECF subfamily K03088 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000005492 268.0
DYD1_k127_2545607_3 - - - - 0.000000000000000000000000000000000000000000000000000000000000000000004968 238.0
DYD1_k127_2545607_4 - - - - 0.0000000000000000000000000000000000000002654 154.0
DYD1_k127_2548488_0 Drug resistance transporter Bcr CflA subfamily K03446,K07552 - - 1.857e-235 731.0
DYD1_k127_2548488_1 Catalyzes the specific phosphorylation of 1,6-anhydro-N- acetylmuramic acid (anhMurNAc) with the simultaneous cleavage of the 1,6-anhydro ring, generating MurNAc-6-P. Is required for the utilization of anhMurNAc either imported from the medium or derived from its own cell wall murein, and thus plays a role in cell wall recycling K09001 - 2.7.1.170 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001094 608.0
DYD1_k127_2548488_2 Methyltransferase domain - - - 0.00000000000000000000000000000000000000000000000000000000000006938 214.0
DYD1_k127_2553901_0 TonB-dependent receptor plug - - - 3.769e-214 668.0
DYD1_k127_2553901_1 Two component regulator three Y - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004039 423.0
DYD1_k127_2556421_0 Peptide chain release factor 2 directs the termination of translation in response to the peptide chain termination codons UGA and UAA K02836 - - 7.213e-203 633.0
DYD1_k127_2556421_1 A predicted alpha-helical domain with a conserved ER motif. - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005306 595.0
DYD1_k127_2556421_2 Transglutaminase/protease-like homologues - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006499 483.0
DYD1_k127_2556421_3 Belongs to the ArsC family K00537 - 1.20.4.1 0.000000000000000000000000000000000000000000000000101 179.0
DYD1_k127_2557691_0 COGs COG4299 conserved - - - 7.056e-218 679.0
DYD1_k127_2557691_1 UDP-glucose 4-epimerase K01784 - 5.1.3.2 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000001294 287.0
DYD1_k127_2557691_2 - - - - 0.00000000000000000000000000000000000000000000000000002059 189.0
DYD1_k127_2557691_3 2-oxoglutarate dehydrogenase K00164 - 1.2.4.2 0.00000000000000000000000000000000000156 138.0
DYD1_k127_2566260_0 DNA polymerase K02337 - 2.7.7.7 0.0 2353.0
DYD1_k127_2566260_1 TIGRFAM conserved - - - 0.000000000000000000000000000000000000003278 146.0
DYD1_k127_2568550_0 Belongs to the sodium solute symporter (SSF) (TC 2.A.21) family K03307 - - 0.0 1020.0
DYD1_k127_2568550_1 Converts alpha-aldose to the beta-anomer K01785 - 5.1.3.3 0.000000000000000000000000000000000000000000000000000000000000000000000000001427 254.0
DYD1_k127_2572509_0 Sigma-70, region 4 K03088 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000008873 277.0
DYD1_k127_2572509_1 Critical role in recombination and DNA repair. Helps process Holliday junction intermediates to mature products by catalyzing branch migration. Has a DNA unwinding activity characteristic of a DNA helicase with a 3'- to 5'- polarity. Unwinds branched duplex DNA (Y-DNA) K03655 - 3.6.4.12 0.0000000000000000000000000000000000000000000000000000000000000000000000001059 248.0
DYD1_k127_2572509_2 Catalyzes the reductive cleavage of azo bond in aromatic azo compounds to the corresponding amines. Requires NADH, but not NADPH, as an electron donor for its activity K01118 - - 0.00000000000000000000000000000000000000000000000007157 184.0
DYD1_k127_2572509_3 Putative lumazine-binding - - - 0.000000000000000000000000000412 118.0
DYD1_k127_2592332_0 Bifunctional enzyme with both catalase and broad- spectrum peroxidase activity K03782 - 1.11.1.21 0.0 1073.0
DYD1_k127_2592332_1 DinB superfamily - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001832 330.0
DYD1_k127_2592332_2 Pfam Family of - - - 0.00000000000000000000000000000000000000000000000000000000000002993 216.0
DYD1_k127_2631755_0 Prevents misfolding and promotes the refolding and proper assembly of unfolded polypeptides generated under stress conditions K04077 GO:0003674,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006457,GO:0006458,GO:0008150,GO:0009987,GO:0016465,GO:0032991,GO:0044183,GO:0044424,GO:0044444,GO:0044445,GO:0044464,GO:0051082,GO:0061077,GO:0101031,GO:1990220 - 0.0 1000.0
DYD1_k127_2631755_1 Binds to Cpn60 in the presence of Mg-ATP and suppresses the ATPase activity of the latter K04078 GO:0003674,GO:0005488,GO:0005515,GO:0006457,GO:0006458,GO:0006950,GO:0006986,GO:0008150,GO:0009987,GO:0010033,GO:0035966,GO:0042221,GO:0043167,GO:0043169,GO:0046872,GO:0050896,GO:0051082,GO:0051084,GO:0051085,GO:0051087,GO:0061077 - 0.0000000000000000000000000000000000000003574 149.0
DYD1_k127_2631755_2 Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family K07798 - - 0.0000000000000000000000000005276 114.0
DYD1_k127_2649250_0 Facilitates transcription termination by a mechanism that involves Rho binding to the nascent RNA, activation of Rho's RNA-dependent ATPase activity, and release of the mRNA from the DNA template K03628 - - 5.074e-290 896.0
DYD1_k127_2649250_1 ABC transporter K18890 - - 4.403e-234 728.0
DYD1_k127_2649250_2 Beta-lactamase superfamily domain K06136 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008579 386.0
DYD1_k127_2649250_3 Formation of pseudouridine at positions 38, 39 and 40 in the anticodon stem and loop of transfer RNAs K06173 GO:0001522,GO:0003674,GO:0003824,GO:0006139,GO:0006396,GO:0006399,GO:0006400,GO:0006725,GO:0006807,GO:0008033,GO:0008150,GO:0008152,GO:0009451,GO:0009982,GO:0009987,GO:0010467,GO:0016070,GO:0016853,GO:0016866,GO:0031119,GO:0034470,GO:0034641,GO:0034660,GO:0043170,GO:0043412,GO:0044237,GO:0044238,GO:0046483,GO:0071704,GO:0090304,GO:1901360 5.4.99.12 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008588 348.0
DYD1_k127_2649250_4 Phosphoesterase K07095 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008513 308.0
DYD1_k127_2649250_5 - - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000253 286.0
DYD1_k127_2649250_6 - - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000004472 284.0
DYD1_k127_2649250_7 Domain of unknown function (DUF4293) - - - 0.000000000000000000000000000000000000000000000000000000000000000001089 229.0
DYD1_k127_265188_0 COG0642 Signal transduction histidine kinase - - - 4.166e-204 643.0
DYD1_k127_2655634_0 Pregnancy-associated plasma protein-A - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003092 441.0
DYD1_k127_2655634_1 Belongs to the short-chain dehydrogenases reductases (SDR) family - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009274 324.0
DYD1_k127_2671874_0 protein (some members contain a von Willebrand factor type A (vWA) domain) - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002461 506.0
DYD1_k127_2671874_1 Aerotolerance regulator N-terminal - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004587 439.0
DYD1_k127_2671874_2 Belongs to the bacterial solute-binding protein 9 family - - - 0.0000000000061 68.0
DYD1_k127_2674013_0 cell division protein FtsK K03466 - - 0.0 1107.0
DYD1_k127_2684522_0 PQQ enzyme repeat - - - 0.0 1183.0
DYD1_k127_2684522_1 Aldolase/RraA - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009242 562.0
DYD1_k127_2684522_2 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain K01684 - 4.2.1.6 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001068 313.0
DYD1_k127_2684522_3 Cupin domain - - - 0.00000000000000000000000000000000000000003675 154.0
DYD1_k127_2689264_0 Required for accurate and efficient protein synthesis under certain stress conditions. May act as a fidelity factor of the translation reaction, by catalyzing a one-codon backward translocation of tRNAs on improperly translocated ribosomes. Back- translocation proceeds from a post-translocation (POST) complex to a pre-translocation (PRE) complex, thus giving elongation factor G a second chance to translocate the tRNAs correctly. Binds to ribosomes in a GTP-dependent manner K03596 - - 6.363e-305 936.0
DYD1_k127_2689264_1 Sodium:sulfate symporter transmembrane region - - - 0.0000000000000000000000009761 102.0
DYD1_k127_2689264_2 - - - - 0.00000003653 58.0
DYD1_k127_2689264_3 - - - - 0.0001541 48.0
DYD1_k127_2690132_0 Ligates lysine onto the cytidine present at position 34 of the AUA codon-specific tRNA(Ile) that contains the anticodon CAU, in an ATP-dependent manner. Cytidine is converted to lysidine, thus changing the amino acid specificity of the tRNA from methionine to isoleucine K04075 - 6.3.4.19 1.352e-199 629.0
DYD1_k127_2690132_1 component I K01665,K03342 - 2.6.1.85,4.1.3.38 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007414 464.0
DYD1_k127_2690132_2 Thiol disulfide interchange protein K04084 - 1.8.1.8 0.000000000000000000000000000000000000000000000000000000000000000000000001669 250.0
DYD1_k127_2692259_0 Belongs to the UDP-N-acetylglucosamine 2-epimerase family K01791 - 5.1.3.14 1.267e-221 691.0
DYD1_k127_2692259_1 Glycosyl transferases group 1 K03208 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001337 467.0
DYD1_k127_2692259_2 Polysaccharide biosynthesis protein K19068 - 1.1.1.367 0.0000000000000000000000000000000000000000000128 162.0
DYD1_k127_2692259_3 Belongs to the UDP-glucose GDP-mannose dehydrogenase family K00012 - 1.1.1.22 0.000000000000000000000002197 103.0
DYD1_k127_2692376_0 homoserine dehydrogenase K12524 - 1.1.1.3,2.7.2.4 0.0 1421.0
DYD1_k127_2692376_1 Threonine synthase K01733 - 4.2.3.1 1.135e-243 756.0
DYD1_k127_2692376_2 peptidase M24 K01262 - 3.4.11.9 2.014e-243 763.0
DYD1_k127_2692376_3 The glycine cleavage system catalyzes the degradation of glycine K00605 - 2.1.2.10 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004946 559.0
DYD1_k127_2692376_4 Catalyzes the ATP-dependent phosphorylation of L- homoserine to L-homoserine phosphate K00872 - 2.7.1.39 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002272 556.0
DYD1_k127_2693521_0 Catalyzes the conversion of epoxyqueuosine (oQ) to queuosine (Q), which is a hypermodified base found in the wobble positions of tRNA(Asp), tRNA(Asn), tRNA(His) and tRNA(Tyr) K18979 - 1.17.99.6 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001947 425.0
DYD1_k127_2693521_1 Cupin domain - - - 0.000000000000000000000000000000000000000000000000000000001663 203.0
DYD1_k127_2693521_2 Bacterial regulatory proteins, tetR family - - - 0.0000000000000000000000000000000000000000006108 164.0
DYD1_k127_2693521_3 The RuvA-RuvB complex in the presence of ATP renatures cruciform structure in supercoiled DNA with palindromic sequence, indicating that it may promote strand exchange reactions in homologous recombination. RuvAB is a helicase that mediates the Holliday junction migration by localized denaturation and reannealing K03551 - 3.6.4.12 0.0000000000000000000000000000000000001345 141.0
DYD1_k127_2693962_0 Belongs to the anaerobic coproporphyrinogen-III oxidase family - - - 3.269e-266 822.0
DYD1_k127_2693962_1 acetyl-CoA hydrolase - - - 1.53e-221 692.0
DYD1_k127_2693962_2 Universal stress protein - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004598 457.0
DYD1_k127_2693962_3 Interacts with outer membrane receptor proteins that carry out high-affinity binding and energy dependent uptake into the periplasmic space of specific substrates. It could act to transduce energy from the cytoplasmic membrane to specific energy- requiring processes in the outer membrane, resulting in the release into the periplasm of ligands bound by these outer membrane proteins K03832 - - 0.000000000000000000000000000000000000000000000003595 173.0
DYD1_k127_2693962_4 Cytochrome c biogenesis protein K09792 - - 0.0000000000000000001229 88.0
DYD1_k127_269597_0 Quinol cytochrome c oxidoreductase - - - 5.086e-272 839.0
DYD1_k127_269597_1 Subunits I and II form the functional core of the enzyme complex. Electrons originating in cytochrome c are transferred via heme a and Cu(A) to the binuclear center formed by heme a3 and Cu(B) K02275 - 1.9.3.1 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000154 326.0
DYD1_k127_269597_2 Cytochrome C oxidase, cbb3-type, subunit III - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005118 314.0
DYD1_k127_2727880_0 sequence-specific DNA binding K07720 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000003396 295.0
DYD1_k127_2727880_2 Belongs to the MIP aquaporin (TC 1.A.8) family K02440 - - 0.00002064 51.0
DYD1_k127_2733103_0 TonB dependent receptor - - - 3.649e-313 963.0
DYD1_k127_2733103_1 Susd and RagB outer membrane lipoprotein - - - 8.522e-255 792.0
DYD1_k127_2733103_2 Cell wall-associated hydrolase (invasion-associated protein) - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000335 503.0
DYD1_k127_2750852_0 - - - - 1.348e-201 630.0
DYD1_k127_2750852_1 sequence-specific DNA binding - - - 0.000000000000000000000000000000000000002031 147.0
DYD1_k127_2758336_0 Pfam Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003802 530.0
DYD1_k127_2758336_1 COGs COG0745 Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004596 310.0
DYD1_k127_276033_0 cytosine-specific methyltransferase K00558 - 2.1.1.37 4.42e-230 716.0
DYD1_k127_276033_1 Domain of unknown function (DUF4401) - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000006595 299.0
DYD1_k127_276033_2 - - - - 0.000000000000000000000000000000000000000000000000006119 187.0
DYD1_k127_276033_3 GDYXXLXY protein - - - 0.0000000000000000000000000000007146 127.0
DYD1_k127_276033_4 (GNAT) family K02348 - - 0.0000000000000000001435 88.0
DYD1_k127_276561_0 Alpha beta hydrolase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001632 514.0
DYD1_k127_276561_1 Belongs to the pirin family K06911 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001906 469.0
DYD1_k127_276561_2 Necessary for normal cell division and for the maintenance of normal septation K03978 GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0044424,GO:0044444,GO:0044464 - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003051 391.0
DYD1_k127_276561_3 Transcriptional regulator, AraC family - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001117 330.0
DYD1_k127_276561_4 Belongs to the MraZ family K03925 GO:0000976,GO:0001067,GO:0003674,GO:0003676,GO:0003677,GO:0003690,GO:0003700,GO:0005488,GO:0006355,GO:0008150,GO:0009889,GO:0009890,GO:0009892,GO:0010468,GO:0010556,GO:0010558,GO:0010605,GO:0010629,GO:0019219,GO:0019222,GO:0031323,GO:0031324,GO:0031326,GO:0031327,GO:0031333,GO:0043254,GO:0043565,GO:0044087,GO:0044212,GO:0045892,GO:0045934,GO:0048519,GO:0048523,GO:0050789,GO:0050794,GO:0051128,GO:0051129,GO:0051171,GO:0051172,GO:0051252,GO:0051253,GO:0060255,GO:0065007,GO:0080090,GO:0097159,GO:0140110,GO:1901363,GO:1902679,GO:1903506,GO:1903507,GO:1990837,GO:2000112,GO:2000113,GO:2000142,GO:2000143,GO:2001141 - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000003118 291.0
DYD1_k127_276561_5 MraW methylase family K03438 GO:0000154,GO:0001510,GO:0003674,GO:0003824,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006139,GO:0006364,GO:0006396,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0008168,GO:0008170,GO:0008173,GO:0008649,GO:0008757,GO:0009451,GO:0009987,GO:0010467,GO:0016070,GO:0016072,GO:0016434,GO:0016740,GO:0016741,GO:0022613,GO:0031167,GO:0032259,GO:0034470,GO:0034641,GO:0034660,GO:0042254,GO:0043170,GO:0043412,GO:0043414,GO:0044085,GO:0044237,GO:0044238,GO:0044260,GO:0044424,GO:0044464,GO:0046483,GO:0070475,GO:0071424,GO:0071704,GO:0071840,GO:0090304,GO:0140098,GO:0140102,GO:1901360 2.1.1.199 0.000000000000000000000000000000000000000000000000000000000000000003968 231.0
DYD1_k127_276561_6 One of several proteins that assist in the late maturation steps of the functional core of the 30S ribosomal subunit. Associates with free 30S ribosomal subunits (but not with 30S subunits that are part of 70S ribosomes or polysomes). Required for efficient processing of 16S rRNA. May interact with the 5'-terminal helix region of 16S rRNA K02834 - - 0.000000000000000000000000277 106.0
DYD1_k127_2774147_0 Responsible for synthesis of pseudouridine from uracil K06180 - 5.4.99.23 8.743e-219 681.0
DYD1_k127_2774147_1 Belongs to the UPF0246 family K09861 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002313 454.0
DYD1_k127_2774147_2 Forms oxaloacetate, a four-carbon dicarboxylic acid source for the tricarboxylic acid cycle K01595 - 4.1.1.31 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003438 418.0
DYD1_k127_2774147_3 serine threonine protein kinase K01921,K08884,K12132 - 2.7.11.1,6.3.2.4 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002678 361.0
DYD1_k127_2774147_4 Belongs to the D-alanine--D-alanine ligase family K01921 - 6.3.2.4 0.0000000000000000000006325 96.0
DYD1_k127_2810729_0 Polysaccharide biosynthesis protein - - - 4.828e-230 721.0
DYD1_k127_2810729_1 Glycosyltransferase Family 4 - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000005881 260.0
DYD1_k127_2817735_0 ABC transporter K18889 - - 0.0 1010.0
DYD1_k127_2817735_1 Oxidoreductase family, NAD-binding Rossmann fold - - - 3.477e-281 867.0
DYD1_k127_2817735_2 Involved in transcription antitermination. Required for transcription of ribosomal RNA (rRNA) genes. Binds specifically to the boxA antiterminator sequence of the ribosomal RNA (rrn) operons K03625 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001981 556.0
DYD1_k127_2817735_3 Cleaves the N-terminal amino acid of tripeptides K01258 - 3.4.11.4 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000238 361.0
DYD1_k127_2817735_4 DNA alkylation repair enzyme - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000002036 269.0
DYD1_k127_2817735_5 Protein of unknown function (DUF1573) - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000009648 265.0
DYD1_k127_2817735_6 Glyoxalase-like domain - - - 0.00000000000000000000000000000000000000000000000006399 179.0
DYD1_k127_2817735_7 Preprotein translocase subunit YajC K03210 - - 0.0000000000000000000000000000000000000000000000008583 175.0
DYD1_k127_2817735_8 Bacteriocin-protection, YdeI or OmpD-Associated - - - 0.000000000000000000000000000000000000000005483 155.0
DYD1_k127_2817735_9 Bacteriocin-protection, YdeI or OmpD-Associated - - - 0.000000000000000000000000000000000000009332 146.0
DYD1_k127_2825693_0 Alpha amylase, catalytic domain - - - 9.975e-265 818.0
DYD1_k127_2825693_1 hydrolase, family 65, central catalytic K00691 - 2.4.1.8 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000511 387.0
DYD1_k127_2825931_0 Catalyzes the oxidative decarboxylation of 6- phosphogluconate to ribulose 5-phosphate and CO(2), with concomitant reduction of NADP to NADPH K00033 - 1.1.1.343,1.1.1.44 2.765e-281 867.0
DYD1_k127_2825931_1 Iron-regulated protein - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004637 477.0
DYD1_k127_2825931_2 Catalyzes the oxidation of glucose 6-phosphate to 6- phosphogluconolactone K00036 - 1.1.1.363,1.1.1.49 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004197 368.0
DYD1_k127_2826044_0 Domain of unknown function (DUF5103) - - - 1.59e-243 754.0
DYD1_k127_2826044_1 Protein of unknown function (DUF3667) - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001134 314.0
DYD1_k127_2826044_2 NQR complex catalyzes the reduction of ubiquinone-1 to ubiquinol by two successive reactions, coupled with the transport of Na( ) ions from the cytoplasm to the periplasm. NqrA to NqrE are probably involved in the second step, the conversion of ubisemiquinone to ubiquinol K00346 - 1.6.5.8 0.0000000000000000000000000000000000000000000006735 166.0
DYD1_k127_2849582_0 TIGRFAM TIGR02757 family protein - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004479 453.0
DYD1_k127_2849582_1 Part of the ABC transporter complex LolCDE involved in the translocation of lipoproteins, in an ATP-dependent manner K09810 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001758 417.0
DYD1_k127_2849582_2 - - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002113 400.0
DYD1_k127_2849582_3 GTP cyclohydrolase I K01495 GO:0000166,GO:0001882,GO:0001883,GO:0003674,GO:0003824,GO:0003933,GO:0003934,GO:0005488,GO:0005525,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006066,GO:0006725,GO:0006729,GO:0006732,GO:0006807,GO:0008150,GO:0008152,GO:0008270,GO:0009058,GO:0009108,GO:0009987,GO:0016787,GO:0016810,GO:0016814,GO:0017076,GO:0017144,GO:0018130,GO:0019001,GO:0019238,GO:0019438,GO:0019751,GO:0032549,GO:0032550,GO:0032553,GO:0032555,GO:0032561,GO:0034311,GO:0034312,GO:0034641,GO:0035639,GO:0036094,GO:0042558,GO:0042559,GO:0043167,GO:0043168,GO:0043169,GO:0044237,GO:0044249,GO:0044271,GO:0044281,GO:0044283,GO:0044424,GO:0044464,GO:0046146,GO:0046165,GO:0046173,GO:0046483,GO:0046872,GO:0046914,GO:0051186,GO:0051188,GO:0071704,GO:0097159,GO:0097367,GO:1901265,GO:1901360,GO:1901362,GO:1901363,GO:1901564,GO:1901566,GO:1901576,GO:1901615,GO:1901617 3.5.4.16 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000513 382.0
DYD1_k127_2849582_4 TonB-dependent receptor K02014 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001317 325.0
DYD1_k127_2849582_5 Has an important function as a repair enzyme for proteins that have been inactivated by oxidation. Catalyzes the reversible oxidation-reduction of methionine sulfoxide in proteins to methionine K07304,K12267 - 1.8.4.11,1.8.4.12 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005971 321.0
DYD1_k127_2849582_6 - - - - 0.00000000000000000000000000000000000000000000000000000001186 198.0
DYD1_k127_2888112_0 NQR complex catalyzes the reduction of ubiquinone-1 to ubiquinol by two successive reactions, coupled with the transport of Na( ) ions from the cytoplasm to the periplasm. NqrA to NqrE are probably involved in the second step, the conversion of ubisemiquinone to ubiquinol K00347 - 1.6.5.8 4.243e-251 777.0
DYD1_k127_2888112_1 NQR complex catalyzes the reduction of ubiquinone-1 to ubiquinol by two successive reactions, coupled with the transport of Na( ) ions from the cytoplasm to the periplasm. NqrA to NqrE are probably involved in the second step, the conversion of ubisemiquinone to ubiquinol K00346 - 1.6.5.8 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001664 569.0
DYD1_k127_2888112_2 NQR complex catalyzes the reduction of ubiquinone-1 to ubiquinol by two successive reactions, coupled with the transport of Na( ) ions from the cytoplasm to the periplasm. NqrA to NqrE are probably involved in the second step, the conversion of ubisemiquinone to ubiquinol K00348 - 1.6.5.8 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009564 429.0
DYD1_k127_2888112_3 NQR complex catalyzes the reduction of ubiquinone-1 to ubiquinol by two successive reactions, coupled with the transport of Na( ) ions from the cytoplasm to the periplasm. NqrA to NqrE are probably involved in the second step, the conversion of ubisemiquinone to ubiquinol K00349 - 1.6.5.8 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002714 385.0
DYD1_k127_2888112_4 NQR complex catalyzes the reduction of ubiquinone-1 to ubiquinol by two successive reactions, coupled with the transport of Na( ) ions from the cytoplasm to the periplasm. NqrA to NqrE are probably involved in the second step, the conversion of ubisemiquinone to ubiquinol K00350 - 1.6.5.8 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003714 342.0
DYD1_k127_2896320_0 esterase of the alpha-beta hydrolase superfamily - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001919 594.0
DYD1_k127_2896320_1 Flagellar Motor Protein K02557 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004535 365.0
DYD1_k127_2896320_2 - - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009303 321.0
DYD1_k127_2896320_3 aminopeptidase K01256 - 3.4.11.2 0.0000000004846 59.0
DYD1_k127_2896320_4 aminopeptidase K01256 - 3.4.11.2 0.00001719 46.0
DYD1_k127_2915939_0 Biotin carboxylase K01961,K01965 - 6.3.4.14,6.4.1.2,6.4.1.3 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001071 428.0
DYD1_k127_2915939_1 Biotin carboxyl carrier protein K01960 - 6.4.1.1 0.0000000000000000000000000000000000000000000000000000000000000000002805 234.0
DYD1_k127_2915939_2 uridine kinase K00876 - 2.7.1.48 0.0000000000000000000000000000000000000000000000000000006991 196.0
DYD1_k127_2943119_0 Bacterial Ig-like domain - - - 1.198e-280 869.0
DYD1_k127_2943119_1 amidophosphoribosyl-transferase K00764 - 2.4.2.14 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002258 375.0
DYD1_k127_2943119_2 amidohydrolase K13566 - 3.5.1.3 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008493 362.0
DYD1_k127_2943119_3 Ankyrin repeats (many copies) K06867 - - 0.000000000000000000000000000000000000001946 149.0
DYD1_k127_2943119_4 xyloglucan:xyloglucosyl transferase activity - - - 0.0000000000000000000000008712 103.0
DYD1_k127_2943978_0 Starch-binding associating with outer membrane - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000148 471.0
DYD1_k127_2943978_1 Belongs to the class IV-like SAM-binding methyltransferase superfamily. RNA methyltransferase TrmH family K03218,K03437 - 2.1.1.185 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001852 420.0
DYD1_k127_2943978_2 membrane protein (homolog of Drosophila rhomboid) - - - 0.00000000000000000000000002477 110.0
DYD1_k127_2943978_3 - - - - 0.000002617 57.0
DYD1_k127_2945042_0 Antirepressor regulating drug resistance - - - 4.445e-246 769.0
DYD1_k127_2949596_0 exodeoxyribonuclease III K01142 - 3.1.11.2 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008768 498.0
DYD1_k127_2949596_1 isochorismatase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000002176 267.0
DYD1_k127_2949596_2 Protein of unknown function (DUF1697) - - - 0.00000000000000000000000000000001309 131.0
DYD1_k127_2949596_3 aldo keto reductase - - - 0.0000000000000000000000008485 104.0
DYD1_k127_2949847_0 Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family - - - 4.867e-290 897.0
DYD1_k127_2949847_1 protein conserved in bacteria - - - 0.0000000000000000000000000000000000000000000000003641 177.0
DYD1_k127_2971865_0 Ribosomal protein S6 modification K05844 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007194 504.0
DYD1_k127_2971865_1 signal transduction histidine kinase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000007272 289.0
DYD1_k127_2971865_2 - - - - 0.000000000000003212 76.0
DYD1_k127_2971865_3 succinylglutamate desuccinylase K06987 - - 0.00001734 49.0
DYD1_k127_2976545_0 COG2204 Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains - - - 4.572e-266 824.0
DYD1_k127_2976545_1 Outer membrane efflux protein K12340 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002288 496.0
DYD1_k127_2976545_2 Histidine kinase - - - 0.0000000000002662 72.0
DYD1_k127_2994324_0 Glycosyl hydrolase family 115 - - - 0.0 1122.0
DYD1_k127_2994324_1 Carbamoyltransferase C-terminus K00612 - - 1.201e-296 920.0
DYD1_k127_2994324_2 chaperone-mediated protein folding - - - 1.636e-211 670.0
DYD1_k127_2994324_3 endo-1,4-beta-xylanase activity K01181 - 3.2.1.8 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006088 424.0
DYD1_k127_2994324_4 - - - - 0.00000000000000000000000000006884 119.0
DYD1_k127_2994324_5 Starch-binding protein K21572 - - 0.000000000000000003229 85.0
DYD1_k127_3001340_0 In eubacteria ppGpp (guanosine 3'-diphosphate 5-' diphosphate) is a mediator of the stringent response that coordinates a variety of cellular activities in response to changes in nutritional abundance K00951 - 2.7.6.5 0.0 1382.0
DYD1_k127_3001340_1 Zn-dependent protease with chaperone function K03799,K06013 - 3.4.24.84 5.018e-224 698.0
DYD1_k127_3001340_2 Belongs to the class IV-like SAM-binding methyltransferase superfamily. RNA methyltransferase TrmH family K03437 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001202 319.0
DYD1_k127_3001340_3 Belongs to the Fur family K03711 - - 0.0000000000000000000000000000000000000000000000000000000000001821 212.0
DYD1_k127_3008365_0 SusD family K21572 - - 4.268e-237 736.0
DYD1_k127_3008365_1 Belongs to the alkaline phosphatase family K01077 - 3.1.3.1 0.000000000654 62.0
DYD1_k127_3013392_0 Histidine kinase internal region - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009961 530.0
DYD1_k127_3013392_1 LytTr DNA-binding domain K02477 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004326 383.0
DYD1_k127_3013392_2 response regulator, receiver - - - 0.00000000000000000000000000000000000000000000000000000000000009029 218.0
DYD1_k127_3013392_3 Histidine kinase - - - 0.00000000000000000004218 91.0
DYD1_k127_3017387_0 COG1209 dTDP-glucose pyrophosphorylase K00973 - 2.7.7.24 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001859 501.0
DYD1_k127_3017387_1 Tetratricopeptide repeat - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003717 459.0
DYD1_k127_3017387_2 Domain of unknown function (DUF4292) - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001389 340.0
DYD1_k127_3020923_0 Antirepressor regulating drug resistance - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000158 600.0
DYD1_k127_3020923_1 PhnA protein K06193 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009763 354.0
DYD1_k127_3020923_2 Penicillinase repressor - - - 0.0000000000000000000000000000000000000000000000000000000000000000009473 229.0
DYD1_k127_3020923_3 COG0624 Acetylornithine deacetylase Succinyl-diaminopimelate desuccinylase and related - - - 0.000000000000000000000001482 102.0
DYD1_k127_3033199_0 Folylpolyglutamate synthase K11754 - 6.3.2.12,6.3.2.17 1.383e-200 630.0
DYD1_k127_3033199_1 TonB family domain protein - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001862 454.0
DYD1_k127_3033199_2 Mota tolq exbb proton channel K03561 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005821 414.0
DYD1_k127_3033199_3 Pfam Kelch - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002234 394.0
DYD1_k127_3033199_4 COGs COG3279 Response regulator of the LytR AlgR family - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002059 392.0
DYD1_k127_3033199_5 Histidine kinase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006927 396.0
DYD1_k127_3033199_6 Biopolymer transport protein K03559 - - 0.000000000000000000000000000000000000000000000000000000000000000000002357 236.0
DYD1_k127_3033199_7 Na H antiporter NhaD and related arsenite - - - 0.00000000000000000000001373 99.0
DYD1_k127_3033199_8 Domain of unknown function (DUF4907) - - - 0.0000000000000007035 81.0
DYD1_k127_3042663_0 Dolichyl-phosphate-mannose-protein mannosyltransferase - - - 6.207e-228 714.0
DYD1_k127_3042663_1 Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family K00833 - 2.6.1.62 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002121 384.0
DYD1_k127_3042663_2 Catalyzes a mechanistically unusual reaction, the ATP- dependent insertion of CO2 between the N7 and N8 nitrogen atoms of 7,8-diaminopelargonic acid (DAPA) to form an ureido ring K01935 - 6.3.3.3 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000291 302.0
DYD1_k127_3048128_0 MFS transporter - - - 3.688e-252 780.0
DYD1_k127_3048128_1 UDP-2,3-diacylglucosamine hydrolase K03269 - 3.6.1.54 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001104 524.0
DYD1_k127_3048128_2 enoyl-CoA hydratase K13766 - 4.2.1.18 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003056 390.0
DYD1_k127_3048128_3 single-stranded-DNA-specific exonuclease RecJ K07462 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000007898 267.0
DYD1_k127_3048832_0 Releases the supercoiling and torsional tension of DNA, which is introduced during the DNA replication and transcription, by transiently cleaving and rejoining one strand of the DNA duplex. Introduces a single-strand break via transesterification at a target site in duplex DNA. The scissile phosphodiester is attacked by the catalytic tyrosine of the enzyme, resulting in the formation of a DNA-(5'-phosphotyrosyl)-enzyme intermediate and the expulsion of a 3'-OH DNA strand. The free DNA strand then undergoes passage around the unbroken strand, thus removing DNA supercoils. Finally, in the religation step, the DNA 3'-OH attacks the covalent intermediate to expel the active-site tyrosine and restore the DNA phosphodiester backbone K03168 - 5.99.1.2 0.0 1386.0
DYD1_k127_3048832_1 gliding motility-associated lipoprotein GldK - - - 2.879e-295 906.0
DYD1_k127_3048832_2 Belongs to the arginase family K01479 - 3.5.3.8 2.585e-242 751.0
DYD1_k127_3048832_3 Gliding motility protein GldM - - - 2.526e-214 668.0
DYD1_k127_3048832_4 Gliding motility protein GldL - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001522 383.0
DYD1_k127_3053500_0 2-oxoglutarate dehydrogenase K00164 - 1.2.4.2 1.259e-267 826.0
DYD1_k127_3053500_1 The 2-oxoglutarate dehydrogenase complex catalyzes the overall conversion of 2-oxoglutarate to succinyl-CoA and CO(2) K00658 - 2.3.1.61 2.037e-203 638.0
DYD1_k127_3053500_2 hydrolase, TatD K03424 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001397 472.0
DYD1_k127_3053500_3 protease - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000107 261.0
DYD1_k127_3053500_4 - - - - 0.000000000000000000000000000000000000000000001442 171.0
DYD1_k127_3061777_0 Catalyzes the ferrous insertion into protoporphyrin IX K01772 - 4.99.1.1,4.99.1.9 3.056e-218 679.0
DYD1_k127_3061777_1 Mechanosensitive ion channel - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001229 591.0
DYD1_k127_3061777_2 Protein of unknown function (DUF3050) - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002042 329.0
DYD1_k127_3061777_3 Na -driven multidrug efflux pump - - - 0.0000000006119 60.0
DYD1_k127_3067776_0 TonB dependent receptor - - - 2.02e-283 885.0
DYD1_k127_3067776_1 H( )-stimulated, divalent metal cation uptake system - - - 0.000000000000000002814 85.0
DYD1_k127_3084305_0 Catalyzes the prenylation of para-hydroxybenzoate (PHB) with an all-trans polyprenyl group. Mediates the second step in the final reaction sequence of ubiquinone-8 (UQ-8) biosynthesis, which is the condensation of the polyisoprenoid side chain with PHB, generating the first membrane-bound Q intermediate 3- octaprenyl-4-hydroxybenzoate - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000244 420.0
DYD1_k127_3084305_1 Belongs to the sigma-70 factor family. ECF subfamily K03088 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004487 346.0
DYD1_k127_3084305_2 The glycine cleavage system catalyzes the degradation of glycine. The P protein binds the alpha-amino group of glycine through its pyridoxal phosphate cofactor K00281,K00283 - 1.4.4.2 0.0000000000000000000000000000000000000000000000000000000000000004704 220.0
DYD1_k127_3084305_3 - - - - 0.000000000000000000000000000000000002944 138.0
DYD1_k127_3084305_4 peptidase K01284,K01414 - 3.4.15.5,3.4.24.70 0.0000000000000000000000000000000000611 133.0
DYD1_k127_3085827_0 TonB dependent receptor - - - 0.0 1253.0
DYD1_k127_3085827_1 Pfam:SusD K21572 - - 0.0000000000000000000000000006391 116.0
DYD1_k127_3101241_0 type III restriction enzyme, res subunit - - - 5.448e-205 638.0
DYD1_k127_3101241_1 Belongs to the agmatine deiminase family K10536 - 3.5.3.12 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006503 593.0
DYD1_k127_3101241_2 Pfam Carbon-nitrogen hydrolase K12251 - 3.5.1.53 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007066 576.0
DYD1_k127_3101241_3 glycosyltransferase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000195 579.0
DYD1_k127_3101241_4 beta-lactamase - - - 0.00000000000000000000572 91.0
DYD1_k127_3102888_0 TonB-dependent receptor - - - 0.0 1165.0
DYD1_k127_3102888_1 Histidine kinase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001338 574.0
DYD1_k127_3102888_2 that it carries out the mismatch recognition step. This protein has a weak ATPase activity K03555 GO:0003674,GO:0003676,GO:0003677,GO:0003684,GO:0003690,GO:0003824,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0006139,GO:0006259,GO:0006281,GO:0006298,GO:0006725,GO:0006807,GO:0006950,GO:0006974,GO:0008094,GO:0008150,GO:0008152,GO:0009987,GO:0016462,GO:0016787,GO:0016817,GO:0016818,GO:0016887,GO:0017111,GO:0030983,GO:0032300,GO:0032991,GO:0033554,GO:0034641,GO:0042623,GO:0043170,GO:0044237,GO:0044238,GO:0044260,GO:0044424,GO:0044464,GO:0046483,GO:0050896,GO:0051716,GO:0071704,GO:0090304,GO:0097159,GO:1901360,GO:1901363,GO:1990391 - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000135 468.0
DYD1_k127_3102888_3 LytTr DNA-binding domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000005732 253.0
DYD1_k127_3102888_4 endonuclease containing a URI domain K07461 - - 0.000000000000000000000000000000002009 133.0
DYD1_k127_3102888_6 COG1961 Site-specific recombinases, DNA invertase Pin homologs - - - 0.000007976 48.0
DYD1_k127_312921_0 Catalyzes the methylthiolation of N6- (dimethylallyl)adenosine (i(6)A), leading to the formation of 2- methylthio-N6-(dimethylallyl)adenosine (ms(2)i(6)A) at position 37 in tRNAs that read codons beginning with uridine K06168 - 2.8.4.3 8.792e-305 936.0
DYD1_k127_312921_1 Response regulator containing CheY-like receiver AAA-type ATPase and DNA-binding domains - - - 6.108e-241 748.0
DYD1_k127_312921_2 Psort location Cytoplasmic, score 8.96 - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004059 458.0
DYD1_k127_312921_3 Lipopolysaccharide-assembly - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006039 312.0
DYD1_k127_312921_4 Preprotein translocase K03075 - - 0.000000000000000000000000000000000000000000000000000000000006149 208.0
DYD1_k127_312921_5 Methyltransferase domain - - - 0.00001405 51.0
DYD1_k127_3132983_0 Psort location CytoplasmicMembrane, score 10.00 - - - 8.65e-282 869.0
DYD1_k127_3132983_1 Flavodoxin reductases (Ferredoxin-NADPH reductases) family 1 K02613 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003868 568.0
DYD1_k127_3132983_2 esterase of the alpha-beta hydrolase superfamily K07001 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000509 409.0
DYD1_k127_3132983_3 ATP-binding protein K01990 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004466 380.0
DYD1_k127_3132983_4 COG2335 Secreted and surface protein containing fasciclin-like repeats - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000534 278.0
DYD1_k127_3141235_0 TonB-dependent receptor plug - - - 1.911e-296 915.0
DYD1_k127_3141235_1 Oxidoreductase family, C-terminal alpha/beta domain - - - 1.635e-237 736.0
DYD1_k127_3141235_2 Oxidoreductase family, NAD-binding Rossmann fold - - - 4.65e-227 704.0
DYD1_k127_3141235_3 Belongs to the glycosyl hydrolase 43 family - - - 1.463e-198 622.0
DYD1_k127_3141235_4 Domain of unknown function (DUF4974) - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008994 484.0
DYD1_k127_3141235_5 Belongs to the sigma-70 factor family. ECF subfamily K03088 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002102 306.0
DYD1_k127_3145463_0 Belongs to the glycosyl hydrolase 67 family K01235 - 3.2.1.139 0.0 1202.0
DYD1_k127_3145463_1 Glucuronate isomerase K01812 - 5.3.1.12 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009055 411.0
DYD1_k127_3145463_2 Short-chain dehydrogenase reductase sdr K00046 - 1.1.1.69 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002773 411.0
DYD1_k127_3145463_3 Catalyzes the dehydration of D-mannonate K01686 GO:0003674,GO:0003824,GO:0005488,GO:0005506,GO:0005975,GO:0005996,GO:0006063,GO:0006064,GO:0006082,GO:0008150,GO:0008152,GO:0008198,GO:0008927,GO:0009056,GO:0009987,GO:0016052,GO:0016054,GO:0016829,GO:0016835,GO:0016836,GO:0019585,GO:0019752,GO:0030145,GO:0032787,GO:0042839,GO:0042840,GO:0043167,GO:0043169,GO:0043436,GO:0044237,GO:0044238,GO:0044248,GO:0044281,GO:0044282,GO:0046365,GO:0046395,GO:0046872,GO:0046914,GO:0071704,GO:0072329,GO:1901575 4.2.1.8 0.00000000000000000000000000000000000000000000000000000000000000000000000000000007112 269.0
DYD1_k127_3165107_0 Involved in the biosynthesis of porphyrin-containing compound - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003517 595.0
DYD1_k127_3165107_1 FOG TPR repeat - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009508 514.0
DYD1_k127_3165107_10 DNA mismatch repair protein - - - 0.000000000000000000000000000000000000746 141.0
DYD1_k127_3165107_11 Domain of unknown function (DUF4279) - - - 0.0000000000000000000000000002261 114.0
DYD1_k127_3165107_12 Antirepressor regulating drug resistance - - - 0.000000001681 59.0
DYD1_k127_3165107_2 Metal-dependent hydrolase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007104 458.0
DYD1_k127_3165107_3 Nuclease that resolves Holliday junction intermediates in genetic recombination. Cleaves the cruciform structure in supercoiled DNA by nicking to strands with the same polarity at sites symmetrically opposed at the junction in the homologous arms and leaves a 5'-terminal phosphate and a 3'-terminal hydroxyl group K01159 - 3.1.22.4 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004007 359.0
DYD1_k127_3165107_4 Protein of unknown function (DUF4230) - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004804 361.0
DYD1_k127_3165107_5 - - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000002935 292.0
DYD1_k127_3165107_6 PFAM Stress responsive alpha-beta barrel - - - 0.000000000000000000000000000000000000000000000000000000000000000002065 228.0
DYD1_k127_3165107_7 Domain of unknown function (DUF4260) - - - 0.0000000000000000000000000000000000000000000000000000000006704 202.0
DYD1_k127_3165107_8 protein conserved in bacteria - - - 0.000000000000000000000000000000000000000000000000000000008059 202.0
DYD1_k127_3165107_9 Domain of unknown function (DUF4279) - - - 0.0000000000000000000000000000000000000341 144.0
DYD1_k127_3167041_0 Mandelate racemase / muconate lactonizing enzyme, C-terminal domain K18334 - 4.2.1.68 8.061e-240 746.0
DYD1_k127_3167041_1 Alpha-L-fucosidase K01206 - 3.2.1.51 4.117e-213 670.0
DYD1_k127_3167041_2 KR domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002448 396.0
DYD1_k127_3167041_3 helix_turn_helix, arabinose operon control protein - - - 0.000000000000000000004535 93.0
DYD1_k127_3167430_0 Permease, YjgP YjgQ family K11720 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002235 518.0
DYD1_k127_3167430_1 Catalyzes the base-exchange of a guanine (G) residue with the queuine precursor 7-aminomethyl-7-deazaguanine (PreQ1) at position 34 (anticodon wobble position) in tRNAs with GU(N) anticodons (tRNA-Asp, -Asn, -His and -Tyr). Catalysis occurs through a double-displacement mechanism. The nucleophile active site attacks the C1' of nucleotide 34 to detach the guanine base from the RNA, forming a covalent enzyme-RNA intermediate. The proton acceptor active site deprotonates the incoming PreQ1, allowing a nucleophilic attack on the C1' of the ribose to form the product. After dissociation, two additional enzymatic reactions on the tRNA convert PreQ1 to queuine (Q), resulting in the hypermodified nucleoside queuosine (7-(((4,5-cis-dihydroxy-2- cyclopenten-1-yl)amino)methyl)-7-deazaguanosine) K00773 - 2.4.2.29 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005047 489.0
DYD1_k127_3167989_0 PFAM Divergent AAA domain - - - 2.323e-231 718.0
DYD1_k127_3167989_1 Belongs to the short-chain dehydrogenases reductases (SDR) family - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002256 367.0
DYD1_k127_3167989_2 23S rRNA-intervening sequence protein - - - 0.00000000000000000000000000000000000000000000005196 172.0
DYD1_k127_3167989_3 Alpha amylase, catalytic domain K05341 - 2.4.1.4 0.0000000000000000000000000000000000000000000006409 167.0
DYD1_k127_3168932_0 transporter of a GTP-driven Fe(2 ) uptake system K04759 - - 0.0 1272.0
DYD1_k127_3168932_1 Peptidase family M50 K11749 - - 1.695e-227 711.0
DYD1_k127_3168932_11 Belongs to the sigma-70 factor family. ECF subfamily K03088 - - 0.0000000000001259 78.0
DYD1_k127_3168932_2 - - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000453 418.0
DYD1_k127_3168932_3 protein SCO1 SenC PrrC involved in biogenesis of respiratory and photosynthetic systems K07152 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000152 409.0
DYD1_k127_3168932_4 Putative zinc-finger - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001888 366.0
DYD1_k127_3168932_5 Protein conserved in bacteria - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002386 308.0
DYD1_k127_3168932_6 - - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000005626 263.0
DYD1_k127_3168932_7 Fe2 transport system protein A K04758 - - 0.000000000000000000000000000000000000001308 147.0
DYD1_k127_3168932_8 Domain of unknown function (DUF4421) - - - 0.00000000000000000000000000000000001434 139.0
DYD1_k127_3168932_9 Kelch motif - - - 0.0000000000000000000000000000000007559 134.0
DYD1_k127_3193728_0 ATPase involved in DNA repair - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000105 577.0
DYD1_k127_3203539_0 Putative beta-barrel porin-2, OmpL-like. bbp2 - - - 6.345e-202 631.0
DYD1_k127_3203539_1 Ammonium Transporter K03320 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002523 432.0
DYD1_k127_3203539_2 Protein of unknown function (DUF1684) K09164 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005964 367.0
DYD1_k127_3203539_3 carboxylic ester hydrolase activity - - - 0.0000000000000000000000000001822 114.0
DYD1_k127_321258_0 Belongs to the ParB family K03497 - - 2.498e-288 897.0
DYD1_k127_321258_1 - - - - 0.00000000000000000000000000000000000000000000000000000000009292 208.0
DYD1_k127_321258_2 Nucleotidyl transferase AbiEii toxin, Type IV TA system - - - 0.0000000000000000000000000000000000007334 140.0
DYD1_k127_321258_3 PepSY-associated TM region - - - 0.0000000000000000000000000001414 115.0
DYD1_k127_3219378_0 Response regulator of the LytR AlgR family - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005842 354.0
DYD1_k127_3219378_1 2TM domain - - - 0.000000000000000000000000000000000000000000000001277 176.0
DYD1_k127_3219378_2 2TM domain - - - 0.0000000000000000000000000000000000000000000002412 168.0
DYD1_k127_3219378_3 2TM domain - - - 0.000000000000000000000000000000000000007531 150.0
DYD1_k127_3219378_4 Enoyl-(Acyl carrier protein) reductase - - - 0.000000005706 59.0
DYD1_k127_322611_0 Anthranilate synthase K01657 - 4.1.3.27 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002261 441.0
DYD1_k127_322611_1 Belongs to the UPF0312 family - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002226 333.0
DYD1_k127_322611_2 nitroreductase - - - 0.0000000000000000000000000000000000000000000000004466 177.0
DYD1_k127_3228092_0 Catalyzes the transfer of the phosphoribosyl group of 5- phosphorylribose-1-pyrophosphate (PRPP) to anthranilate to yield N-(5'-phosphoribosyl)-anthranilate (PRA) K00766,K13497 GO:0000162,GO:0003674,GO:0003824,GO:0004048,GO:0006082,GO:0006520,GO:0006568,GO:0006576,GO:0006586,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0008652,GO:0009058,GO:0009072,GO:0009073,GO:0009308,GO:0009309,GO:0009987,GO:0016053,GO:0016740,GO:0016757,GO:0016763,GO:0018130,GO:0019438,GO:0019752,GO:0034641,GO:0042401,GO:0042430,GO:0042435,GO:0043436,GO:0044106,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0044283,GO:0046219,GO:0046394,GO:0046483,GO:0071704,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576,GO:1901605,GO:1901607 2.4.2.18,4.1.3.27 4.339e-197 616.0
DYD1_k127_3228092_1 The beta subunit is responsible for the synthesis of L- tryptophan from indole and L-serine K01696,K01817 - 4.2.1.20,5.3.1.24 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001292 462.0
DYD1_k127_3228092_2 Belongs to the TrpC family K01609 GO:0003674,GO:0003824,GO:0004425,GO:0016829,GO:0016830,GO:0016831 4.1.1.48 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001328 447.0
DYD1_k127_3228092_3 Belongs to the TrpF family K01817 - 5.3.1.24 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003964 385.0
DYD1_k127_3228092_4 Anthranilate synthase K01658 - 4.1.3.27 0.0000000000000000000000000000000000000000000000000000000000006445 210.0
DYD1_k127_3230323_0 phosphate transporter - - - 0.0 1216.0
DYD1_k127_3230323_1 PFAM Phosphate-selective porin O and P - - - 5.011e-208 652.0
DYD1_k127_3230323_2 Deoxyguanosinetriphosphate triphosphohydrolase K01129 - 3.1.5.1 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000002239 295.0
DYD1_k127_3258065_0 Belongs to the peptidase S41A family K03797 - 3.4.21.102 1.21e-300 927.0
DYD1_k127_3258065_1 Predicted membrane protein (DUF2157) - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004137 396.0
DYD1_k127_3258065_2 biopolymer transport protein - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000209 319.0
DYD1_k127_3258065_3 RNaseP catalyzes the removal of the 5'-leader sequence from pre-tRNA to produce the mature 5'-terminus. It can also cleave other RNA substrates such as 4.5S RNA. The protein component plays an auxiliary but essential role in vivo by binding to the 5'-leader sequence and broadening the substrate specificity of the ribozyme K03536 - 3.1.26.5 0.000000000000000000000000000000000006783 141.0
DYD1_k127_3258065_4 Domain of unknown function (DUF4401) - - - 0.00000000000000000001416 96.0
DYD1_k127_3267885_0 Catalyzes the hydrolysis of UDP-3-O-myristoyl-N- acetylglucosamine to form UDP-3-O-myristoylglucosamine and acetate, the committed step in lipid A biosynthesis K16363 - 3.5.1.108,4.2.1.59 3.462e-293 901.0
DYD1_k127_3267885_1 COG0745 Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain - - - 2.979e-215 674.0
DYD1_k127_3267885_2 Phosphohydrolase K06885 - - 5.57e-215 672.0
DYD1_k127_3267885_3 UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase, LpxD K02536 - 2.3.1.191 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007284 582.0
DYD1_k127_3267885_4 Involved in the biosynthesis of lipid A, a phosphorylated glycolipid that anchors the lipopolysaccharide to the outer membrane of the cell K00677 - 2.3.1.129 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003476 433.0
DYD1_k127_3267885_5 NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient K00332 GO:0003674,GO:0003824,GO:0003954,GO:0006091,GO:0008137,GO:0008150,GO:0008152,GO:0009987,GO:0015980,GO:0016491,GO:0016651,GO:0016655,GO:0044237,GO:0045333,GO:0050136,GO:0055114 1.6.5.3 0.000000001043 59.0
DYD1_k127_3278409_0 potassium uptake protein, TrkH family K03498 - - 5.488e-261 815.0
DYD1_k127_3278409_1 COG0569 K transport systems NAD-binding component K03499 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007425 364.0
DYD1_k127_3278409_2 - catabolite gene activator and regulatory subunit of cAMP-dependent protein - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002318 315.0
DYD1_k127_3278409_3 PFAM Formylglycine-generating sulfatase enzyme - - - 0.000000000000000000000000000000000000000005131 158.0
DYD1_k127_3278409_4 Thioredoxin K03671 - - 0.0000000000000000000000002856 105.0
DYD1_k127_3287510_0 Belongs to the major facilitator superfamily. Sugar transporter (TC 2.A.1.1) family - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007606 577.0
DYD1_k127_3287510_1 Glycosyl hydrolase family 92 - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001294 351.0
DYD1_k127_3291458_0 Oxidoreductase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004919 433.0
DYD1_k127_3291458_1 nitrite reductase [NAD(P)H] activity - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000003222 284.0
DYD1_k127_3291458_2 Necessary for efficient RNA polymerase transcription elongation past template-encoded arresting sites. The arresting sites in DNA have the property of trapping a certain fraction of elongating RNA polymerases that pass through, resulting in locked ternary complexes. Cleavage of the nascent transcript by cleavage factors such as GreA or GreB allows the resumption of elongation from the new 3'terminus. GreA releases sequences of 2 to 3 nucleotides K03624 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000006403 284.0
DYD1_k127_3291458_3 HIT family K02503 - - 0.0000000000000000000000000000000000000000000000000000000000000000000003333 239.0
DYD1_k127_3291458_4 - - - - 0.00000000000000000000000000000000000000000000000000000003368 197.0
DYD1_k127_330729_0 Oxidoreductase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001784 546.0
DYD1_k127_330729_1 Dehydrogenase K00074 - 1.1.1.157 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007063 528.0
DYD1_k127_330729_2 PFAM Uncharacterised conserved protein UCP033563 - - - 0.0000000000000000000000000000000000000000000000000000000000000000000002029 242.0
DYD1_k127_3330370_0 Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family - - - 2.9e-235 730.0
DYD1_k127_3330370_1 Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002368 584.0
DYD1_k127_3330370_2 Outer membrane efflux protein - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006352 381.0
DYD1_k127_3361032_0 - - - - 6.557e-208 651.0
DYD1_k127_3361032_1 ATPase family associated with various cellular activities (AAA) K03924 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005957 581.0
DYD1_k127_3361032_2 - - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002261 355.0
DYD1_k127_3361032_3 Required for formation of the rod structure in the basal body of the flagellar apparatus. Together with FliI and FliH, may constitute the export apparatus of flagellin - - - 0.0000000000000000000000000000000001416 133.0
DYD1_k127_336654_0 Catalyzes the hydroxylation of L-kynurenine (L-Kyn) to form 3-hydroxy-L-kynurenine (L-3OHKyn). Required for synthesis of quinolinic acid K00486 - 1.14.13.9 1.921e-267 826.0
DYD1_k127_336654_1 zinc ribbon domain K07164 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001198 446.0
DYD1_k127_336654_2 Cleaves peptides in various proteins in a process that requires ATP hydrolysis. Has a chymotrypsin-like activity. Plays a major role in the degradation of misfolded proteins K01358 - 3.4.21.92 0.00000000000000000000000000000000000000001585 153.0
DYD1_k127_3367335_0 Dihydrodipicolinate synthetase family - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001757 470.0
DYD1_k127_3367335_1 PFAM Oxidoreductase family, NAD-binding Rossmann fold - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002696 365.0
DYD1_k127_3367335_2 Glucose / Sorbosone dehydrogenase K21430 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000001654 299.0
DYD1_k127_336741_0 Succinyl-CoA synthetase functions in the citric acid cycle (TCA), coupling the hydrolysis of succinyl-CoA to the synthesis of either ATP or GTP and thus represents the only step of substrate-level phosphorylation in the TCA. The beta subunit provides nucleotide specificity of the enzyme and binds the substrate succinate, while the binding sites for coenzyme A and phosphate are found in the alpha subunit K01903 - 6.2.1.5 2.028e-220 684.0
DYD1_k127_336741_1 ATP-dependent protease La (LON) substrate-binding domain K01338,K07157 - 3.4.21.53 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008577 375.0
DYD1_k127_336741_2 Succinyl-CoA synthetase functions in the citric acid cycle (TCA), coupling the hydrolysis of succinyl-CoA to the synthesis of either ATP or GTP and thus represents the only step of substrate-level phosphorylation in the TCA. The beta subunit provides nucleotide specificity of the enzyme and binds the substrate succinate, while the binding sites for coenzyme A and phosphate are found in the alpha subunit K01903 - 6.2.1.5 0.000000000000000002151 86.0
DYD1_k127_3371881_0 gliding motility-associated protein GldE - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003643 440.0
DYD1_k127_3371881_1 gliding motility protein GldD - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000004604 270.0
DYD1_k127_3371881_2 xyloglucan:xyloglucosyl transferase activity - - - 0.00000000000000000000000000000000000005149 144.0
DYD1_k127_3385141_0 ADP binding K13459 - - 0.000000002282 66.0
DYD1_k127_3386160_0 Belongs to the sodium solute symporter (SSF) (TC 2.A.21) family K14393 - - 8.355e-265 818.0
DYD1_k127_3386160_1 Phosphoribosylaminoimidazolesuccinocarboxamide synthase K01923 GO:0003674,GO:0003824,GO:0004639,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006139,GO:0006163,GO:0006164,GO:0006188,GO:0006189,GO:0006725,GO:0006753,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009117,GO:0009123,GO:0009124,GO:0009126,GO:0009127,GO:0009150,GO:0009152,GO:0009156,GO:0009161,GO:0009165,GO:0009167,GO:0009168,GO:0009259,GO:0009260,GO:0009987,GO:0016874,GO:0016879,GO:0016881,GO:0018130,GO:0019438,GO:0019637,GO:0019693,GO:0034641,GO:0034654,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0044424,GO:0044464,GO:0046040,GO:0046390,GO:0046483,GO:0055086,GO:0071704,GO:0072521,GO:0072522,GO:0090407,GO:1901135,GO:1901137,GO:1901293,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576 6.3.2.6 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005912 580.0
DYD1_k127_3386160_2 Domain of unknown function (DUF4212) - - - 0.00000000000000000000000000000000000000004439 152.0
DYD1_k127_3387978_0 ABC-type antimicrobial peptide transport system, permease component K02004 - - 2.36e-241 749.0
DYD1_k127_3387978_1 Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family K02005 - - 4.476e-202 632.0
DYD1_k127_3387978_2 Outer membrane efflux protein K12340 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006112 443.0
DYD1_k127_3387978_3 ABC-type antimicrobial peptide transport system, permease component K02004 - - 0.00000000000000000000000000000000000000000000000000000002231 198.0
DYD1_k127_3412405_0 Catalyzes the conversion of acetate into acetyl-CoA (AcCoA), an essential intermediate at the junction of anabolic and catabolic pathways. AcsA undergoes a two-step reaction. In the first half reaction, AcsA combines acetate with ATP to form acetyl-adenylate (AcAMP) intermediate. In the second half reaction, it can then transfer the acetyl group from AcAMP to the sulfhydryl group of CoA, forming the product AcCoA K01895 - 6.2.1.1 0.0 1227.0
DYD1_k127_3412405_1 signal-transduction protein containing cAMP-binding and CBS K07182 - - 0.0 1034.0
DYD1_k127_3412405_2 COGs COG2176 DNA polymerase III alpha subunit (gram-positive type) K02342 - 2.7.7.7 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004349 331.0
DYD1_k127_3412405_3 Belongs to the sodium solute symporter (SSF) (TC 2.A.21) family K14393 - - 0.00000000000000000000000000000000000000006092 151.0
DYD1_k127_3412405_4 - - - - 0.000000000000000000000000004803 110.0
DYD1_k127_341540_0 Domain of unknown function (DUF4382) - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007026 462.0
DYD1_k127_341540_1 transcriptional regulator K07734 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002638 332.0
DYD1_k127_341540_2 Type IX secretion system membrane protein PorP/SprF - - - 0.0000000000000000000000000000002761 122.0
DYD1_k127_3422986_0 COG3893 Inactivated superfamily I helicase - - - 0.0 1333.0
DYD1_k127_3422986_1 Belongs to the ompA family - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007701 326.0
DYD1_k127_3422986_2 Belongs to the short-chain dehydrogenases reductases (SDR) family - - - 0.00000000000000000000000000000000000000000000000000000000000000000005317 231.0
DYD1_k127_3449117_0 galactose-1-phosphate uridylyltransferase K00965 - 2.7.7.12 3.711e-206 645.0
DYD1_k127_3449117_1 Belongs to the GHMP kinase family. GalK subfamily K00849 - 2.7.1.6 0.000000000000000000000000000000000000000000000000000000000001176 213.0
DYD1_k127_3454752_0 TonB-dependent receptor - - - 4.723e-300 923.0
DYD1_k127_3454752_1 Catalyzes the first step in hexosamine metabolism, converting fructose-6P into glucosamine-6P using glutamine as a nitrogen source K00820 - 2.6.1.16 2.7e-286 881.0
DYD1_k127_3460282_0 Gaf domain - - - 0.0 1329.0
DYD1_k127_3460282_1 Metal dependent phosphohydrolases with conserved 'HD' motif. - - - 4.79e-208 652.0
DYD1_k127_3460282_2 Calcineurin-like phosphoesterase superfamily domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001146 602.0
DYD1_k127_3460282_3 Acyltransferase family K11941 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008693 569.0
DYD1_k127_3460282_4 helix_turn_helix, arabinose operon control protein - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002025 565.0
DYD1_k127_3460282_5 Calcineurin-like phosphoesterase - - - 0.000000000000000000000000000000000000000000002966 166.0
DYD1_k127_3480655_0 PFAM Neutral alkaline nonlysosomal ceramidase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008554 611.0
DYD1_k127_3480655_1 Mandelate racemase muconate lactonizing enzyme, N-terminal domain K01684 - 4.2.1.6 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001153 527.0
DYD1_k127_3480655_2 KR domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001881 324.0
DYD1_k127_3480655_3 Belongs to the sodium solute symporter (SSF) (TC 2.A.21) family K03307 - - 0.00000000000000000000000000000000000000000000000000000000000000009137 223.0
DYD1_k127_3492467_0 radical SAM protein - - - 1.121e-266 822.0
DYD1_k127_3492467_1 DNA metabolism protein - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002005 480.0
DYD1_k127_3502702_0 integral membrane protein - - - 3.333e-243 755.0
DYD1_k127_3502702_1 Domain of unknown function (DUF4369) - - - 0.0000000000000000000000000000000000000000000000000000000000000000002177 232.0
DYD1_k127_3502702_2 DNA polymerase III subunit alpha - - - 0.000000000000000000001094 94.0
DYD1_k127_3533749_0 COG1529 Aerobic-type carbon monoxide dehydrogenase large subunit CoxL CutL homologs K07303 - 1.3.99.16 2.645e-224 698.0
DYD1_k127_3533749_1 Endonuclease Exonuclease phosphatase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007413 422.0
DYD1_k127_3533749_2 Aerobic-type carbon monoxide dehydrogenase small subunit CoxS K07302 - 1.3.99.16 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000005515 289.0
DYD1_k127_3539801_0 Succinyl-CoA synthetase functions in the citric acid cycle (TCA), coupling the hydrolysis of succinyl-CoA to the synthesis of either ATP or GTP and thus represents the only step of substrate-level phosphorylation in the TCA. The alpha subunit of the enzyme binds the substrates coenzyme A and phosphate, while succinate binding and nucleotide specificity is provided by the beta subunit K01902 - 6.2.1.5 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006489 561.0
DYD1_k127_3539801_1 reductase K00059 - 1.1.1.100 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003824 470.0
DYD1_k127_3539801_2 glucosamine N-acyltransferase K02536 - 2.3.1.191 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000001447 284.0
DYD1_k127_3539801_3 oxidoreductase activity - - - 0.00000000000000547 75.0
DYD1_k127_3549153_0 Has lipid A 3-O-deacylase activity. Hydrolyzes the ester bond at the 3 position of lipid A, a bioactive component of lipopolysaccharide (LPS), thereby releasing the primary fatty acyl moiety - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002984 509.0
DYD1_k127_3549153_1 Belongs to the sigma-70 factor family. ECF subfamily K03088 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000589 316.0
DYD1_k127_3549153_2 - - - - 0.0000000000000000000000000000000000000000000000000000000000000000278 225.0
DYD1_k127_3549153_3 GAF domain - - - 0.000000000000000000000000000000000000000000000000000000004432 201.0
DYD1_k127_3561584_0 LysM domain - - - 0.0 1196.0
DYD1_k127_3561584_1 Domain of unknown function (DUF4976) - - - 1.987e-250 781.0
DYD1_k127_3561584_2 secreted Zn-dependent protease - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001055 312.0
DYD1_k127_3561584_3 Glycosyl hydrolase family 20, catalytic domain - - - 0.000000000000000000000000000000000000000000004513 166.0
DYD1_k127_3561584_4 OsmC-like protein K07397 - - 0.0000000000000000000000004273 109.0
DYD1_k127_3582021_0 Heparinase II/III N-terminus - - - 7.244e-201 637.0
DYD1_k127_3582021_1 Dehydrogenase K02030,K03810 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001871 553.0
DYD1_k127_3589399_0 Belongs to the phosphofructokinase type A (PFKA) family. PPi-dependent PFK group II subfamily. Atypical ATP- dependent clade X sub-subfamily K00850 - 2.7.1.11 1.969e-239 744.0
DYD1_k127_3589399_1 Universal stress protein family - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005229 332.0
DYD1_k127_3596504_0 Asparagine synthase, glutamine-hydrolyzing K01953 - 6.3.5.4 0.0 1114.0
DYD1_k127_3596504_1 A type II topoisomerase that negatively supercoils closed circular double-stranded (ds) DNA in an ATP-dependent manner to modulate DNA topology and maintain chromosomes in an underwound state. Negative supercoiling favors strand separation, and DNA replication, transcription, recombination and repair, all of which involve strand separation. Also able to catalyze the interconversion of other topological isomers of dsDNA rings, including catenanes and knotted rings. Type II topoisomerases break and join 2 DNA strands simultaneously in an ATP-dependent manner K02470 - 5.99.1.3 0.0 1047.0
DYD1_k127_3596504_2 metal-dependent hydrolase with the TIM-barrel fold - - - 8.032e-291 898.0
DYD1_k127_3596504_3 Protein of unknown function (DUF2911) - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000001898 278.0
DYD1_k127_3596504_4 - - - - 0.000001136 53.0
DYD1_k127_3604255_0 Catalyzes the GTP-dependent ribosomal translocation step during translation elongation. During this step, the ribosome changes from the pre-translocational (PRE) to the post- translocational (POST) state as the newly formed A-site-bound peptidyl-tRNA and P-site-bound deacylated tRNA move to the P and E sites, respectively. Catalyzes the coordinated movement of the two tRNA molecules, the mRNA and conformational changes in the ribosome K02355 - - 0.0 1337.0
DYD1_k127_3604255_1 Ribosomal protein L3 K02906 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001448 316.0
DYD1_k127_3604255_2 One of the primary rRNA binding proteins, it binds directly to 16S rRNA where it nucleates assembly of the head domain of the 30S subunit. Is located at the subunit interface close to the decoding center, probably blocks exit of the E-site tRNA K02992 GO:0000028,GO:0003674,GO:0003676,GO:0003723,GO:0003729,GO:0003735,GO:0005198,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0006412,GO:0006518,GO:0006807,GO:0006996,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0015935,GO:0016043,GO:0019538,GO:0019843,GO:0022607,GO:0022613,GO:0022618,GO:0022626,GO:0022627,GO:0032991,GO:0034622,GO:0034641,GO:0034645,GO:0042254,GO:0042255,GO:0042274,GO:0043043,GO:0043170,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043603,GO:0043604,GO:0043933,GO:0044085,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:0065003,GO:0070925,GO:0071704,GO:0071826,GO:0071840,GO:0097159,GO:1901363,GO:1901564,GO:1901566,GO:1901576,GO:1990904 - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001708 301.0
DYD1_k127_3604255_3 Interacts with and stabilizes bases of the 16S rRNA that are involved in tRNA selection in the A site and with the mRNA backbone. Located at the interface of the 30S and 50S subunits, it traverses the body of the 30S subunit contacting proteins on the other side and probably holding the rRNA structure together. The combined cluster of proteins S8, S12 and S17 appears to hold together the shoulder and platform of the 30S subunit K02950 GO:0003674,GO:0003735,GO:0005198,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005840,GO:0006412,GO:0006518,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0019538,GO:0032991,GO:0034641,GO:0034645,GO:0043043,GO:0043170,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044424,GO:0044444,GO:0044464,GO:0071704,GO:1901564,GO:1901566,GO:1901576,GO:1990904 - 0.0000000000000000000000000000000000000000000000000000000000000000000000009992 246.0
DYD1_k127_3604255_4 Involved in the binding of tRNA to the ribosomes K02946 GO:0003674,GO:0003735,GO:0005198,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005840,GO:0006412,GO:0006518,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0015935,GO:0019538,GO:0032991,GO:0034641,GO:0034645,GO:0043043,GO:0043170,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044446,GO:0044464,GO:0071704,GO:1901564,GO:1901566,GO:1901576,GO:1990904 - 0.0000000000000000000000000000000000000000000000000000004242 193.0
DYD1_k127_3604255_5 TonB-linked outer membrane protein, SusC RagA family - - - 0.000000000000000000001503 94.0
DYD1_k127_360716_0 assembly protein, SufD K09015 - - 2.562e-269 831.0
DYD1_k127_360716_1 Catalyzes the removal of elemental sulfur and selenium atoms from L-cysteine, L-cystine, L-selenocysteine, and L- selenocystine to produce L-alanine K11717 - 2.8.1.7,4.4.1.16 5.454e-245 759.0
DYD1_k127_360716_2 Part of SUF system involved in inserting iron-sulfur clusters into proteins K09013 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007845 464.0
DYD1_k127_360716_3 Peptidase M43 - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001125 347.0
DYD1_k127_360716_4 ABC-type transport system involved in Fe-S cluster assembly, permease component K09014 - - 0.0000000000002744 69.0
DYD1_k127_3608865_0 - - - - 0.00000000000000000000000000000000001179 145.0
DYD1_k127_3608865_1 - - - - 0.0000000009344 66.0
DYD1_k127_3611830_0 The UvrABC repair system catalyzes the recognition and processing of DNA lesions. UvrA is an ATPase and a DNA-binding protein. A damage recognition complex composed of 2 UvrA and 2 UvrB subunits scans DNA for abnormalities. When the presence of a lesion has been verified by UvrB, the UvrA molecules dissociate K03701 - - 0.0 1058.0
DYD1_k127_3611830_1 aminopeptidase N - - - 4.833e-317 976.0
DYD1_k127_3611830_2 Belongs to the LOG family K06966 - 3.2.2.10 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001082 441.0
DYD1_k127_3615020_0 COG1807 4-amino-4-deoxy-L-arabinose transferase and related - - - 8.124e-301 930.0
DYD1_k127_3615020_1 Catalyzes the reversible hydrolysis of the amide bond within dihydroorotate. This metabolic intermediate is required for the biosynthesis of pyrimidine nucleotides K01465 - 3.5.2.3 4.118e-262 810.0
DYD1_k127_3615020_2 Pfam Glycosyl transferase family 2 K00721 - 2.4.1.83 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001213 468.0
DYD1_k127_3615020_3 NAD-dependent epimerase K00091 - 1.1.1.219 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004301 323.0
DYD1_k127_3615020_4 Domain of unknown function (DUF4271) - - - 0.000000000000000000000000000000000000000000000000000007559 194.0
DYD1_k127_3615020_5 Domain of unknown function (DUF4296) - - - 0.000000000000000000000000000000000000000000006187 166.0
DYD1_k127_362219_0 zinc metallopeptidase K06973 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002211 334.0
DYD1_k127_362219_1 Iron-storage protein K02217 - 1.16.3.2 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001003 332.0
DYD1_k127_362219_2 transcriptional regulator K03718 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001878 301.0
DYD1_k127_362219_3 Saccharopine dehydrogenase K00290,K00293 - 1.5.1.10,1.5.1.7 0.00000000000000000000000000000000000000000000000000000000000000000000001968 242.0
DYD1_k127_362219_4 - - - - 0.00000000000000000000000000000000000000000003885 165.0
DYD1_k127_3622967_0 Alpha beta - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000352 473.0
DYD1_k127_3622967_1 - - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000006284 269.0
DYD1_k127_3622967_2 Four helix bundle sensory module for signal transduction - - - 0.0000000000000000000000000000000000000000000000000000007167 197.0
DYD1_k127_3622967_3 DinB superfamily - - - 0.000000000000000000000000000000000000000000000000000003094 194.0
DYD1_k127_3632109_0 Asp-tRNAAsn Glu-tRNAGln amidotransferase A subunit and related K01426 - 3.5.1.4 1.505e-285 884.0
DYD1_k127_3632109_1 Involved in targeting and insertion of nascent membrane proteins into the cytoplasmic membrane. Acts as a receptor for the complex formed by the signal recognition particle (SRP) and the ribosome-nascent chain (RNC) K03110 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004225 587.0
DYD1_k127_3632109_2 Belongs to the CinA family K03742,K03743 - 3.5.1.42 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004432 458.0
DYD1_k127_3632109_3 Belongs to the bacterial ribosomal protein bL28 family K02902 GO:0003674,GO:0003735,GO:0005198,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0015934,GO:0022625,GO:0022626,GO:0032991,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:1990904 - 0.000000000000000000000000000000000001318 139.0
DYD1_k127_3632109_4 Ribosomal protein L33 K02913 - - 0.0000000000000000000000000000001108 124.0
DYD1_k127_3632109_5 Domain of unknown function (DUF4295) - - - 0.00000000000000000001263 91.0
DYD1_k127_3636187_0 X-Pro dipeptidyl-peptidase K06978 - - 0.0 1245.0
DYD1_k127_3636187_1 Catalyzes the formation of S-adenosylmethionine (AdoMet) from methionine and ATP. The overall synthetic reaction is composed of two sequential steps, AdoMet formation and the subsequent tripolyphosphate hydrolysis which occurs prior to release of AdoMet from the enzyme K00789 GO:0003674,GO:0003824,GO:0004478,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0016740,GO:0016765,GO:0044424,GO:0044444,GO:0044464 2.5.1.6 0.0000000000000000000000000000000000000000000000000000000001013 204.0
DYD1_k127_3636187_2 Catalyzes the formation of L-homocysteine from O- succinyl-L-homoserine (OSHS) and hydrogen sulfide K01740 - 2.5.1.49 0.00000001415 57.0
DYD1_k127_3640491_0 TonB-dependent receptor K02014 - - 1.447e-313 968.0
DYD1_k127_3640491_1 - - - - 0.00000000000000000000000000000000000000000000000000000000000000000007742 234.0
DYD1_k127_3654268_0 ATP-dependent exoDNAse (exonuclease V) beta subunit (contains helicase and exonuclease domains) - - - 0.0 1423.0
DYD1_k127_3654268_1 Catalyzes the cleavage of 2-amino-3-ketobutyrate to glycine and acetyl-CoA K00639 - 2.3.1.29 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001532 570.0
DYD1_k127_3655452_0 alanine dehydrogenase K00259 - 1.4.1.1 1.321e-219 683.0
DYD1_k127_3655452_1 - - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002741 334.0
DYD1_k127_3655452_2 COG0745 Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000107 281.0
DYD1_k127_3655452_3 ATPase or kinase K06925 - - 0.0000000000000000000000000000000000000000000000000000000000000004143 222.0
DYD1_k127_3669254_0 ATP-dependent serine protease that mediates the selective degradation of mutant and abnormal proteins as well as certain short-lived regulatory proteins. Required for cellular homeostasis and for survival from DNA damage and developmental changes induced by stress. Degrades polypeptides processively to yield small peptide fragments that are 5 to 10 amino acids long. Binds to DNA in a double-stranded, site-specific manner K01338 - 3.4.21.53 0.0 1043.0
DYD1_k127_3669254_1 Belongs to the sigma-70 factor family. ECF subfamily K03088 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001228 344.0
DYD1_k127_3669254_2 - - - - 0.000000000000005421 75.0
DYD1_k127_3672784_0 Histidine kinase - - - 0.0 1139.0
DYD1_k127_3672784_1 von Willebrand factor, type A - - - 1.069e-207 650.0
DYD1_k127_3672784_2 membrane - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001655 422.0
DYD1_k127_36800_0 - - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006413 401.0
DYD1_k127_3682510_0 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase K00261 - 1.4.1.3 1.665e-241 750.0
DYD1_k127_3682510_1 mechanosensitive ion channel K16053 - - 0.000000000000000000000000000000000000000000000000000000000000000000009754 237.0
DYD1_k127_3682510_2 Transcription elongation factor, GreA/GreB, C-term K06140 - - 0.000000000000000000000000000000000000000000000000000000003385 201.0
DYD1_k127_3682510_3 - - - - 0.00000000000000000000000000000406 124.0
DYD1_k127_3684364_0 COG3653 N-acyl-D-aspartate D-glutamate deacylase K06015 - 3.5.1.81 1.191e-209 663.0
DYD1_k127_3684364_1 Starch-binding associating with outer membrane - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000224 542.0
DYD1_k127_3684364_2 - - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004509 535.0
DYD1_k127_3684364_3 cellulase activity K01727 - 4.2.2.1 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001155 534.0
DYD1_k127_3684364_4 Proline dehydrogenase K00318 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001261 358.0
DYD1_k127_3693304_0 Gliding motility protein GldJ - - - 0.0 1112.0
DYD1_k127_3693304_1 Involved in cell wall formation. Catalyzes the final step in the synthesis of UDP-N-acetylmuramoyl-pentapeptide, the precursor of murein K01929 - 6.3.2.10 0.00000000000000000000000000000000000000000000000000000000000000000000000000000009827 269.0
DYD1_k127_3693304_2 long-chain fatty acid transport protein - - - 0.000000000000000000000000000000000000000000000000000000000000001029 221.0
DYD1_k127_370119_0 Belongs to the class I-like SAM-binding methyltransferase superfamily. RNA M5U methyltransferase family K03215 - 2.1.1.190 4.175e-271 838.0
DYD1_k127_370119_1 - - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002057 424.0
DYD1_k127_370119_2 glyoxalase bleomycin resistance protein dioxygenase K06996 - - 0.00000000000000000000000000000000000000000000000003984 181.0
DYD1_k127_370119_3 Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family K00819 - 2.6.1.13 0.000000000000000000001094 94.0
DYD1_k127_370119_4 - - - - 0.00000000009615 69.0
DYD1_k127_3711350_0 Belongs to the class-IV pyridoxal-phosphate-dependent aminotransferase family K00826 - 2.6.1.42 1.516e-194 609.0
DYD1_k127_3711350_1 S-adenosyl-L-methionine-dependent methyltransferase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001749 343.0
DYD1_k127_3711350_2 Domain of unknown function (DUF4920) - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000002017 249.0
DYD1_k127_3711350_3 epimerase K07071 - - 0.00000000000000000000000000000000000000000000000000000000000001347 218.0
DYD1_k127_3711514_0 PFAM Major facilitator superfamily MFS-1 - - - 2.578e-247 766.0
DYD1_k127_3711514_1 Nucleoside H symporter - - - 3.737e-221 690.0
DYD1_k127_3711514_2 Oxidoreductase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002645 493.0
DYD1_k127_3711514_3 Damage-inducible protein DinB - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000001485 267.0
DYD1_k127_3711514_4 Xylose isomerase - - - 0.00000000000000000000000000000000000000000000000000001589 189.0
DYD1_k127_3717854_0 Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family K15726 - - 1.271e-302 931.0
DYD1_k127_3717854_1 - - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000829 256.0
DYD1_k127_3717854_2 - - - - 0.00000000000000000000000000000000000000000000000000000000000000000006752 234.0
DYD1_k127_3717854_3 - - - - 0.0000000000000000000000000000000000000000000000000002323 187.0
DYD1_k127_3723857_0 Catalyzes the reversible phosphorylation of UMP to UDP K09903 - 2.7.4.22 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003621 383.0
DYD1_k127_3723857_1 HEAT repeats - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000483 336.0
DYD1_k127_3723857_2 TIGRFAM RNA polymerase sigma factor, sigma-70 family K03088 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000004514 283.0
DYD1_k127_372441_0 Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family K07787,K15726 - - 0.0 1588.0
DYD1_k127_3746553_0 Produces ATP from ADP in the presence of a proton gradient across the membrane. The alpha chain is a regulatory subunit K02111 - 3.6.3.14 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004398 374.0
DYD1_k127_3746553_1 F(1)F(0) ATP synthase produces ATP from ADP in the presence of a proton or sodium gradient. F-type ATPases consist of two structural domains, F(1) containing the extramembraneous catalytic core and F(0) containing the membrane proton channel, linked together by a central stalk and a peripheral stalk. During catalysis, ATP synthesis in the catalytic domain of F(1) is coupled via a rotary mechanism of the central stalk subunits to proton translocation K02113 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000184 294.0
DYD1_k127_3746553_2 Component of the F(0) channel, it forms part of the peripheral stalk, linking F(1) to F(0) K02109 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000009072 251.0
DYD1_k127_3746553_3 ATP synthase A chain K02108 - - 0.000000000000000000000000000000000000000000000653 167.0
DYD1_k127_3746553_4 F(1)F(0) ATP synthase produces ATP from ADP in the presence of a proton or sodium gradient. F-type ATPases consist of two structural domains, F(1) containing the extramembraneous catalytic core and F(0) containing the membrane proton channel, linked together by a central stalk and a peripheral stalk. During catalysis, ATP synthesis in the catalytic domain of F(1) is coupled via a rotary mechanism of the central stalk subunits to proton translocation K02110 GO:0003674,GO:0003824,GO:0005215,GO:0005575,GO:0005622,GO:0005623,GO:0006139,GO:0006163,GO:0006164,GO:0006725,GO:0006753,GO:0006754,GO:0006793,GO:0006796,GO:0006807,GO:0006810,GO:0006811,GO:0006812,GO:0008150,GO:0008152,GO:0008324,GO:0009058,GO:0009117,GO:0009123,GO:0009124,GO:0009126,GO:0009127,GO:0009141,GO:0009142,GO:0009144,GO:0009145,GO:0009150,GO:0009152,GO:0009156,GO:0009161,GO:0009165,GO:0009167,GO:0009168,GO:0009199,GO:0009201,GO:0009205,GO:0009206,GO:0009259,GO:0009260,GO:0009987,GO:0015075,GO:0015077,GO:0015078,GO:0015318,GO:0015399,GO:0015405,GO:0015672,GO:0015985,GO:0015986,GO:0016020,GO:0016462,GO:0016469,GO:0016787,GO:0016817,GO:0016818,GO:0016887,GO:0017111,GO:0017144,GO:0018130,GO:0019438,GO:0019637,GO:0019693,GO:0019829,GO:0022804,GO:0022853,GO:0022857,GO:0022890,GO:0032991,GO:0033177,GO:0034220,GO:0034641,GO:0034654,GO:0042623,GO:0042625,GO:0042626,GO:0043492,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0044424,GO:0044425,GO:0044464,GO:0044769,GO:0045259,GO:0045263,GO:0046034,GO:0046390,GO:0046483,GO:0046933,GO:0051179,GO:0051234,GO:0055085,GO:0055086,GO:0071704,GO:0072521,GO:0072522,GO:0090407,GO:0090662,GO:0098655,GO:0098660,GO:0098662,GO:0098796,GO:0099131,GO:0099132,GO:1901135,GO:1901137,GO:1901293,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576,GO:1902600 - 0.000000000000000000000000000002122 120.0
DYD1_k127_3749008_0 Catalyzes the thiamine diphosphate-dependent decarboxylation of 2-oxoglutarate and the subsequent addition of the resulting succinic semialdehyde-thiamine pyrophosphate anion to isochorismate to yield 2-succinyl-5-enolpyruvyl-6-hydroxy-3- cyclohexene-1-carboxylate (SEPHCHC) K02551 - 2.2.1.9 1.062e-283 881.0
DYD1_k127_3749008_1 protein conserved in bacteria K00243 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002596 494.0
DYD1_k127_3749008_2 Isochorismate synthase K02361,K02552 - 5.4.4.2 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008393 396.0
DYD1_k127_3749008_3 Protein of unknown function (DUF2853) - - - 0.00000000000000000000000000000000000000000000000000000001186 198.0
DYD1_k127_3750556_0 Aminotransferase K10206,K14261 - 2.6.1.83 9.859e-227 704.0
DYD1_k127_3750556_1 prephenate dehydrogenase K04517 - 1.3.1.12 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001611 525.0
DYD1_k127_3750556_2 3-deoxy-D-arabino-heptulosonate 7-phosphate (DAHP) synthase K04516 - 5.4.99.5 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001103 465.0
DYD1_k127_3750556_3 Prephenate dehydratase K04518 - 4.2.1.51 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000001688 293.0
DYD1_k127_3754398_0 oxidoreductase activity - - - 5.481e-234 732.0
DYD1_k127_3760203_0 Belongs to the monovalent cation proton antiporter 2 (CPA2) transporter (TC 2.A.37) family K03455 - - 1.146e-277 867.0
DYD1_k127_3760203_1 Activator of Hsp90 ATPase - - - 0.0000000000000000000000000000000000000000000000000000000000000002103 222.0
DYD1_k127_3760203_2 Domain of unknown function (DUF5004) - - - 0.00000000000000000000000000000000000000000000000000000231 197.0
DYD1_k127_3760203_3 glyoxalase K04750 - - 0.00000000000000000000000000000002273 126.0
DYD1_k127_3760203_4 methyltransferase - - - 0.000000000005627 69.0
DYD1_k127_37688_0 Peptidase S8 and S53 subtilisin kexin sedolisin - - - 9.511e-300 929.0
DYD1_k127_37688_1 PFAM Endonuclease Exonuclease phosphatase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001065 496.0
DYD1_k127_3785589_0 PFAM Outer membrane efflux protein - - - 7.672e-232 721.0
DYD1_k127_3785589_1 Helix-turn-helix domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000004763 264.0
DYD1_k127_3785589_2 - - - - 0.00000000000000000000000000000000000000000004809 162.0
DYD1_k127_3785589_3 heavy metal translocating P-type ATPase K01533,K17686 - 3.6.3.4,3.6.3.54 0.00000000000000000000000000000003483 126.0
DYD1_k127_3785589_4 Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family K07787,K15726 - - 0.000000000000000000001783 93.0
DYD1_k127_3785679_0 Domain of Unknown Function with PDB structure (DUF3857) - - - 9.941e-244 764.0
DYD1_k127_3785679_1 Domain of Unknown Function with PDB structure (DUF3857) - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002093 309.0
DYD1_k127_3790552_0 SprA protein - - - 0.0 1984.0
DYD1_k127_3790552_1 Malic enzyme K00027,K00029 - 1.1.1.38,1.1.1.40 0.0 1422.0
DYD1_k127_3790552_2 The RuvA-RuvB complex in the presence of ATP renatures cruciform structure in supercoiled DNA with palindromic sequence, indicating that it may promote strand exchange reactions in homologous recombination. RuvAB is a helicase that mediates the Holliday junction migration by localized denaturation and reannealing. RuvA stimulates, in the presence of DNA, the weak ATPase activity of RuvB K03550 - 3.6.4.12 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006469 328.0
DYD1_k127_3790552_3 MFS/sugar transport protein K16211 - - 0.00000000000000000000000000000000000000000000000000000000000000002156 226.0
DYD1_k127_3793685_0 Dienelactone hydrolase family K07214 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001591 517.0
DYD1_k127_3793685_1 Pyrophosphatase K02428 - 3.6.1.66 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001579 474.0
DYD1_k127_3793685_2 Mate efflux family protein K03327 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007433 390.0
DYD1_k127_3793685_3 GDSL-like Lipase/Acylhydrolase family - - - 0.0001475 44.0
DYD1_k127_3804115_0 Catalyzes the condensation of para-aminobenzoate (pABA) with 6-hydroxymethyl-7,8-dihydropterin diphosphate (DHPt-PP) to form 7,8-dihydropteroate (H2Pte), the immediate precursor of folate derivatives K00796 - 2.5.1.15 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007002 480.0
DYD1_k127_3804115_1 Domain of Unknown Function (DUF1599) - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000188 326.0
DYD1_k127_3804115_2 DisA bacterial checkpoint controller nucleotide-binding - - - 0.0000000000000000116 84.0
DYD1_k127_3820912_0 peptidase M23 - - - 2.94e-312 962.0
DYD1_k127_3820912_1 - - - - 0.0000000000000000000000000000000000000000009242 158.0
DYD1_k127_3820912_2 Activator of cell division through the inhibition of FtsZ GTPase activity, therefore promoting FtsZ assembly into bundles of protofilaments necessary for the formation of the division Z ring. It is recruited early at mid-cell but it is not essential for cell division K09888 - - 0.000000000000000000000000001267 113.0
DYD1_k127_3823343_0 Oxidoreductase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001298 594.0
DYD1_k127_3823343_1 MacB-like periplasmic core domain K02004 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002462 437.0
DYD1_k127_3823343_2 COG1136 ABC-type antimicrobial peptide transport system ATPase component - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001758 417.0
DYD1_k127_3823343_3 An AccC homodimer forms the biotin carboxylase subunit of the acetyl CoA carboxylase, an enzyme that catalyzes the formation of malonyl-CoA, which in turn controls the rate of fatty acid metabolism K01961 - 6.3.4.14,6.4.1.2 0.0000000000000000000000000000000000000000000000000000000000004147 210.0
DYD1_k127_3835741_0 TonB-dependent receptor - - - 0.0 1451.0
DYD1_k127_3835741_1 Tetratricopeptide repeat - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001893 311.0
DYD1_k127_3853612_0 PFAM Bacterial protein of K06915 - - 4.562e-235 730.0
DYD1_k127_3853612_1 Translation initiation inhibitor, yjgF family K09022 - 3.5.99.10 0.0000000000000000000000000000000000000000000000000000000000006954 212.0
DYD1_k127_3853948_0 Belongs to the D-alanine--D-alanine ligase family K01921 - 6.3.2.4 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001373 481.0
DYD1_k127_3853948_1 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006859 434.0
DYD1_k127_3853948_2 Reversibly transfers an adenylyl group from ATP to 4'- phosphopantetheine, yielding dephospho-CoA (dPCoA) and pyrophosphate K00954 - 2.7.7.3 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000004494 288.0
DYD1_k127_387563_0 abc transporter (atp-binding protein) - - - 6.406e-222 689.0
DYD1_k127_387563_1 Belongs to the phenylalanyl-tRNA synthetase beta subunit family. Type 1 subfamily K01890 GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006082,GO:0006139,GO:0006399,GO:0006412,GO:0006418,GO:0006432,GO:0006518,GO:0006520,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009328,GO:0009987,GO:0010467,GO:0016070,GO:0019538,GO:0019752,GO:0032991,GO:0034641,GO:0034645,GO:0034660,GO:0043038,GO:0043039,GO:0043043,GO:0043170,GO:0043436,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044281,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0071704,GO:0090304,GO:1901360,GO:1901564,GO:1901566,GO:1901576,GO:1902494 6.1.1.20 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004126 464.0
DYD1_k127_387563_2 - - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002077 398.0
DYD1_k127_387563_3 COG2335 Secreted and surface protein containing fasciclin-like repeats - - - 0.000000000000000000000000000000000000000000000000000000000000000000000477 241.0
DYD1_k127_3885255_0 Catalyzes the cyclization of GTP to (8S)-3',8-cyclo-7,8- dihydroguanosine 5'-triphosphate K03639 - 4.1.99.22 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003237 522.0
DYD1_k127_3885255_1 Transfers a GMP moiety from GTP to Mo-molybdopterin (Mo- MPT) cofactor (Moco or molybdenum cofactor) to form Mo- molybdopterin guanine dinucleotide (Mo-MGD) cofactor K03752 - 2.7.7.77 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000008213 287.0
DYD1_k127_3885255_2 ThiS family K03636 - - 0.000000000000000000000000000000000000007025 145.0
DYD1_k127_3885255_3 PFAM von Willebrand factor type A - - - 0.00000000000000000000000000000000000005048 143.0
DYD1_k127_3885255_4 involved in molybdopterin and thiamine biosynthesis family 2 K21029,K21147 - 2.7.7.80,2.8.1.11 0.0000000007431 61.0
DYD1_k127_3899339_0 Belongs to the dicarboxylate amino acid cation symporter (DAACS) (TC 2.A.23) family - - - 1.66e-240 747.0
DYD1_k127_3899339_1 Catalyzes the anti-1,4-elimination of the C-3 phosphate and the C-6 proR hydrogen from 5-enolpyruvylshikimate-3-phosphate (EPSP) to yield chorismate, which is the branch point compound that serves as the starting substrate for the three terminal pathways of aromatic amino acid biosynthesis. This reaction introduces a second double bond into the aromatic ring system K01736 GO:0000166,GO:0003674,GO:0003824,GO:0004107,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006082,GO:0006520,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0008652,GO:0009058,GO:0009072,GO:0009073,GO:0009423,GO:0009987,GO:0010181,GO:0016053,GO:0016829,GO:0016835,GO:0016838,GO:0019438,GO:0019752,GO:0032553,GO:0036094,GO:0043167,GO:0043168,GO:0043436,GO:0043648,GO:0043650,GO:0044237,GO:0044238,GO:0044249,GO:0044281,GO:0044283,GO:0044424,GO:0044444,GO:0044464,GO:0046394,GO:0046417,GO:0048037,GO:0050662,GO:0071704,GO:0097159,GO:0097367,GO:1901265,GO:1901360,GO:1901362,GO:1901363,GO:1901564,GO:1901566,GO:1901576 4.2.3.5 2.619e-196 614.0
DYD1_k127_3899339_2 DUF1704 - - - 0.000000000000000000000003566 102.0
DYD1_k127_3904379_0 LytTr DNA-binding domain K02477 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000001836 260.0
DYD1_k127_3904379_1 - - - - 0.000000000000000000000000000000000000009457 152.0
DYD1_k127_3904379_2 signal transduction protein with a C-terminal ATPase domain - - - 0.00001749 48.0
DYD1_k127_3906071_0 2-nitropropane dioxygenase K02371 - 1.3.1.9 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000209 567.0
DYD1_k127_3906071_1 Catalyzes the 2-thiolation of uridine at the wobble position (U34) of tRNA, leading to the formation of s(2)U34 K00566 - 2.8.1.13 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001241 421.0
DYD1_k127_3906071_2 Lipoprotein K05811 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000004304 266.0
DYD1_k127_3906071_3 protein (some members contain a von Willebrand factor type A (vWA) domain) - - - 0.000000000000000000000000000000000000001829 147.0
DYD1_k127_3906424_0 Permeases of the drug metabolite transporter (DMT) superfamily - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003335 501.0
DYD1_k127_3906424_1 DinB superfamily - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000005919 282.0
DYD1_k127_3906424_2 Domain of unknown function (DUF4163) - - - 0.000000000000000000000000000000000000000000000000000000000000004044 218.0
DYD1_k127_3906424_3 Belongs to the ArsC family K00537 - 1.20.4.1 0.0000000000000000000000000000000000000000000000000000000003799 203.0
DYD1_k127_3908849_0 tetratricopeptide repeat - - - 7.875e-221 687.0
DYD1_k127_3908849_1 membrane K08974 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003764 514.0
DYD1_k127_391302_0 branched-chain amino acid transport system II carrier protein K03311 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001626 521.0
DYD1_k127_391302_1 Ketopantoate reductase PanE/ApbA C terminal K00077 - 1.1.1.169 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003588 448.0
DYD1_k127_391302_2 COG1680 Beta-lactamase class C and other penicillin binding proteins - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005408 398.0
DYD1_k127_391302_3 Cation efflux family - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006585 381.0
DYD1_k127_3917306_0 Catalyzes the reversible conversion of 2- phosphoglycerate into phosphoenolpyruvate. It is essential for the degradation of carbohydrates via glycolysis K01689 - 4.2.1.11 1.407e-265 819.0
DYD1_k127_3917306_1 Synthesizes alpha-1,4-glucan chains using ADP-glucose K00703 - 2.4.1.21 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001251 516.0
DYD1_k127_3917306_2 Belongs to the CarA family K01956 - 6.3.5.5 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001406 491.0
DYD1_k127_392542_0 Phosphate starvation-inducible protein PhoH K06217 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001223 575.0
DYD1_k127_392542_1 Pfam S-adenosyl-l-methionine hydroxide adenosyltransferase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002508 499.0
DYD1_k127_392542_2 gliding motility-associated ABC transporter permease protein GldF K01992 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001682 433.0
DYD1_k127_392542_3 Gliding motility protein GldG K01992 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000241 325.0
DYD1_k127_392542_4 Antibiotic biosynthesis monooxygenase - - - 0.0000000000000000000000000000000000000000000000322 170.0
DYD1_k127_3931343_0 Conjugal transfer protein - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000003174 258.0
DYD1_k127_3931343_2 Psort location Cytoplasmic, score - - - 0.00000000000000000000000000000000000000000000000001416 183.0
DYD1_k127_3933543_0 Na -driven multidrug efflux pump K03327 - - 2.606e-245 762.0
DYD1_k127_3933543_1 Universal stress protein - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003342 470.0
DYD1_k127_3933543_2 PFAM GCN5-related N-acetyltransferase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001208 299.0
DYD1_k127_3933543_3 enoyl-CoA hydratase K13766 - 4.2.1.18 0.000000000000003397 75.0
DYD1_k127_3952170_0 of the RND superfamily K07003 - - 6.201e-212 663.0
DYD1_k127_3952170_1 Responsible for the release of ribosomes from messenger RNA at the termination of protein biosynthesis. May increase the efficiency of translation by recycling ribosomes from one round of translation to another K02838 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003437 314.0
DYD1_k127_3952170_2 Catalyzes the reversible phosphorylation of UMP to UDP K09903 - 2.7.4.22 0.00000000000005905 71.0
DYD1_k127_3953869_0 SprA protein - - - 2.85e-262 810.0
DYD1_k127_3953869_1 Interacts with outer membrane receptor proteins that carry out high-affinity binding and energy dependent uptake into the periplasmic space of specific substrates. It could act to transduce energy from the cytoplasmic membrane to specific energy- requiring processes in the outer membrane, resulting in the release into the periplasm of ligands bound by these outer membrane proteins K03832 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007565 426.0
DYD1_k127_3953869_2 The glycine cleavage system catalyzes the degradation of glycine. The H protein shuttles the methylamine group of glycine from the P protein to the T protein K02437 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000297 243.0
DYD1_k127_3953869_3 VanZ like family - - - 0.00000000000000000000000000000000000000000000000008548 180.0
DYD1_k127_3953869_4 Converts heme B (protoheme IX) to heme O by substitution of the vinyl group on carbon 2 of heme B porphyrin ring with a hydroxyethyl farnesyl side group K02257 - 2.5.1.141 0.0000000000006524 72.0
DYD1_k127_3959532_0 thus facilitating recognition of the initiation point. It is needed to translate mRNA with a short Shine-Dalgarno (SD) purine-rich sequence K02945 - - 0.0 1152.0
DYD1_k127_3959532_1 LysM domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000005288 232.0
DYD1_k127_3959532_2 pyrimidine operon attenuation protein uracil phosphoribosyltransferase K02825 - 2.4.2.9 0.0000000000000000000000000000007205 123.0
DYD1_k127_3959532_3 thus facilitating recognition of the initiation point. It is needed to translate mRNA with a short Shine-Dalgarno (SD) purine-rich sequence K02945 - - 0.0003341 44.0
DYD1_k127_3992512_0 Sodium pump that utilizes the energy of pyrophosphate hydrolysis as the driving force for Na( ) movement across the membrane K15987 - 3.6.1.1 4.599e-211 659.0
DYD1_k127_3992512_1 Sodium pump that utilizes the energy of pyrophosphate hydrolysis as the driving force for Na( ) movement across the membrane K15987 - 3.6.1.1 6.126e-210 654.0
DYD1_k127_3992512_2 Catalyzes the hydrolysis of inorganic pyrophosphate (PPi) forming two phosphate ions K01507 - 3.6.1.1 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002072 343.0
DYD1_k127_3997119_0 Phosphoribosylformylglycinamidine synthase involved in the purines biosynthetic pathway. Catalyzes the ATP-dependent conversion of formylglycinamide ribonucleotide (FGAR) and glutamine to yield formylglycinamidine ribonucleotide (FGAM) and glutamate K01952 - 6.3.5.3 1.835e-267 826.0
DYD1_k127_3997119_1 Acetyltransferase (GNAT) domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000003295 243.0
DYD1_k127_3997119_2 AMP-binding enzyme K01897 - 6.2.1.3 0.000000000000000000000000000000000001419 139.0
DYD1_k127_3998556_0 Amidohydrolase family - - - 6.081e-200 634.0
DYD1_k127_4004526_0 3-hydroxyacyl-CoA dehydrogenase K07516 - 1.1.1.35 4.899e-255 788.0
DYD1_k127_4004526_1 AMP-dependent synthetase K01897 - 6.2.1.3 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002915 452.0
DYD1_k127_4004526_2 transcriptional regulator - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000006617 273.0
DYD1_k127_4016991_0 protein related to plant photosystem II stability assembly factor - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002488 451.0
DYD1_k127_4016991_1 - - - - 0.000000000000000000000000000000000000002461 152.0
DYD1_k127_4016991_2 - - - - 0.0000000000000000000000000000000001062 137.0
DYD1_k127_4016991_3 - - - - 0.0000000000000000000000000000000006096 136.0
DYD1_k127_4016991_4 Belongs to the sigma-70 factor family. ECF subfamily K03088 - - 0.000000000000000000000002257 102.0
DYD1_k127_4028615_0 Pyridine nucleotide-disulphide oxidoreductase domain protein - - - 0.0 1017.0
DYD1_k127_4028615_1 Pfam Glycosyl transferase family 2 - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009287 425.0
DYD1_k127_4028615_2 glycosyl transferase family 2 K00786 - - 0.0000000000000000000000000000000000000000000000000000009693 192.0
DYD1_k127_4028615_3 PFAM FAD-dependent pyridine nucleotide-disulphide oxidoreductase - - - 0.00000000000000000000000000000000000000000000000000008918 187.0
DYD1_k127_4030588_0 Na -driven multidrug efflux pump - - - 2.238e-239 743.0
DYD1_k127_4030588_1 virion core protein (lumpy skin disease virus) - - - 1.826e-225 700.0
DYD1_k127_4030588_2 Psort location Cytoplasmic, score - - - 3.846e-222 691.0
DYD1_k127_4030588_3 COG2706 3-carboxymuconate cyclase K07404 - 3.1.1.31 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000269 581.0
DYD1_k127_4041189_0 Glycine D-amino acid K00285 - 1.4.5.1 9.18e-220 687.0
DYD1_k127_4041189_1 Peptidase m28 - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000257 512.0
DYD1_k127_4041189_2 - - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002123 468.0
DYD1_k127_4041189_3 PFAM phospholipase Carboxylesterase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004628 340.0
DYD1_k127_4041189_4 protein possibly involved in aromatic compounds catabolism K19222 - 3.1.2.28 0.00000000000000000000000000000000000000000000000000000000000000000000000000000007898 267.0
DYD1_k127_4041189_5 chorismate binding enzyme K02361,K02552 - 5.4.4.2 0.00025 45.0
DYD1_k127_4068427_0 FtsX-like permease family K02004 - - 1.019e-314 982.0
DYD1_k127_4068427_1 MacB-like periplasmic core domain K02004 - - 2.765e-232 732.0
DYD1_k127_4068427_2 ABC transporter permease K02004 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003897 364.0
DYD1_k127_406896_0 Catalyzes the reversible oxidation of malate to oxaloacetate K00024 - 1.1.1.37 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005276 544.0
DYD1_k127_406896_1 - - - - 0.0000000000000000000000000000000000000000000000000000000000000002753 221.0
DYD1_k127_4069535_0 Two component regulator three Y - - - 0.0 1326.0
DYD1_k127_4069535_1 TonB-dependent receptor plug - - - 0.0 1129.0
DYD1_k127_4069535_2 major facilitator K08156 - - 2.823e-196 619.0
DYD1_k127_4072030_0 GTPase that associates with the 50S ribosomal subunit and may have a role during protein synthesis or ribosome biogenesis K03665 - - 2.565e-242 751.0
DYD1_k127_4072030_1 Protein of unknown function (DUF3078) - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003006 581.0
DYD1_k127_4072030_2 Protein of unknown function (DUF2480) - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000004476 295.0
DYD1_k127_4072030_3 FeS assembly SUF system protein - - - 0.00000000000000000000000000000000000000000000000000000000001011 209.0
DYD1_k127_4072030_4 SufE protein probably involved in Fe-S center assembly K02426 - - 0.00000000000000000000000000000000000008734 141.0
DYD1_k127_4072030_5 30S ribosomal protein S23 - - - 0.000000000000000000000000000000000001097 142.0
DYD1_k127_4097875_0 Catalyzes the dephosphorylation of undecaprenyl diphosphate (UPP). Confers resistance to bacitracin K06153 - 3.6.1.27 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001532 472.0
DYD1_k127_4097875_1 Responsible for synthesis of pseudouridine from uracil- 55 in the psi GC loop of transfer RNAs K03177 GO:0001522,GO:0003674,GO:0003824,GO:0006139,GO:0006396,GO:0006399,GO:0006400,GO:0006725,GO:0006807,GO:0008033,GO:0008150,GO:0008152,GO:0009451,GO:0009982,GO:0009987,GO:0010467,GO:0016070,GO:0016071,GO:0016556,GO:0016853,GO:0016866,GO:0034470,GO:0034641,GO:0034660,GO:0043170,GO:0043412,GO:0044237,GO:0044238,GO:0046483,GO:0071704,GO:0090304,GO:1901360,GO:1990481 5.4.99.25 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003808 304.0
DYD1_k127_4097875_2 Protein of unknown function (DUF3098) - - - 0.0000000000000000000000000000000000000000001478 160.0
DYD1_k127_4103103_0 Major Facilitator Superfamily K02429 - - 2.676e-218 683.0
DYD1_k127_4103103_1 FMN-dependent dehydrogenase K00101 - 1.1.2.3 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009564 459.0
DYD1_k127_4103103_2 short-chain dehydrogenase K18333 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004373 337.0
DYD1_k127_4103103_3 L-rhamnose mutarotase K03534 - 5.1.3.32 0.0000000000000000000000000000000000000001785 152.0
DYD1_k127_4110871_0 Beta-lactamase - - - 9.177e-217 676.0
DYD1_k127_4110871_1 COGs COG1253 Hemolysins and related protein containing CBS domains - - - 2.009e-203 636.0
DYD1_k127_4110871_2 3'-5' exonuclease related to the exonuclease domain of PolB K07501 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007048 445.0
DYD1_k127_4110871_3 Involved in the cellular defense against the biological effects of O6-methylguanine (O6-MeG) and O4-methylthymine (O4-MeT) in DNA. Repairs the methylated nucleobase in DNA by stoichiometrically transferring the methyl group to a cysteine residue in the enzyme. This is a suicide reaction the enzyme is irreversibly inactivated K00567,K10778 - 2.1.1.63 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002337 304.0
DYD1_k127_4110871_4 Belongs to the peptidase S8 family - - - 0.00000000000000000000000007166 107.0
DYD1_k127_4112019_0 glycosyl hydrolase of K09955 - - 3.43e-239 741.0
DYD1_k127_4112019_1 Alpha-L-arabinofuranosidase K01209 - 3.2.1.55 8.076e-204 635.0
DYD1_k127_4132630_0 Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family K00058 - 1.1.1.399,1.1.1.95 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006867 579.0
DYD1_k127_4132630_1 Domain of unknown function (DU1801) - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000002261 258.0
DYD1_k127_4132630_2 glyoxalase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000008099 249.0
DYD1_k127_4132630_3 Cupin domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000006448 241.0
DYD1_k127_4132630_4 PFAM Chloroplast import component protein (Tic20) - - - 0.00000000000000000000000000000000000000000000000000000000000000000007379 232.0
DYD1_k127_4132630_5 - - - - 0.0000000000000000000000000000000000000000000000000000000000000000002822 230.0
DYD1_k127_4132630_6 Protein of unknown function (DUF4199) - - - 0.0000000000000000000000000000000000000000000000000000000000000000009653 231.0
DYD1_k127_4132630_7 transcriptional regulator - - - 0.00000000000000000000000000000000000000000000000000000000000001226 215.0
DYD1_k127_4132630_8 LuxR family transcriptional regulator - - - 0.0000000000000000000000000000000000000000000000000000000003544 204.0
DYD1_k127_4132630_9 SnoaL-like polyketide cyclase - - - 0.00000000000000000173 84.0
DYD1_k127_4132971_0 Molecular chaperone K04079 - - 3.95e-322 989.0
DYD1_k127_4132971_1 COGs COG4270 membrane protein - - - 0.00000000000000000000000000000000000000000000000000009433 188.0
DYD1_k127_4136445_0 membrane - - - 0.0 1450.0
DYD1_k127_4136445_1 Protein of unknown function (DUF2797) - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006646 448.0
DYD1_k127_4136445_2 - - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000007259 285.0
DYD1_k127_4144994_0 Carbohydrate-binding protein SusD K21572 - - 9.568e-214 675.0
DYD1_k127_4144994_1 TonB-dependent receptor plug - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005111 379.0
DYD1_k127_4144994_2 Pkd domain containing protein - - - 0.0007747 43.0
DYD1_k127_4145582_0 COG0659 Sulfate permease and related K03321 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003271 448.0
DYD1_k127_4145582_1 Reversible hydration of carbon dioxide K01673 - 4.2.1.1 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009178 368.0
DYD1_k127_4152867_0 Beta-L-arabinofuranosidase, GH127 - - - 1.74e-297 916.0
DYD1_k127_4172537_0 Belongs to the ompA family K03286 - - 3.123e-206 648.0
DYD1_k127_4172537_1 Catalyzes the transfer of endogenously produced octanoic acid from octanoyl-acyl-carrier-protein onto the lipoyl domains of lipoate-dependent enzymes. Lipoyl-ACP can also act as a substrate although octanoyl-ACP is likely to be the physiological substrate K03801 GO:0003674,GO:0003824,GO:0006464,GO:0006807,GO:0008150,GO:0008152,GO:0009249,GO:0009987,GO:0010467,GO:0016740,GO:0016746,GO:0016747,GO:0018065,GO:0018193,GO:0018205,GO:0019538,GO:0033819,GO:0036211,GO:0043170,GO:0043412,GO:0044237,GO:0044238,GO:0044260,GO:0044267,GO:0051604,GO:0071704,GO:1901564 2.3.1.181 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004843 445.0
DYD1_k127_4172537_2 Part of the outer membrane protein assembly complex, which is involved in assembly and insertion of beta-barrel proteins into the outer membrane - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001354 395.0
DYD1_k127_4172537_3 - - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006308 370.0
DYD1_k127_4177475_0 aconitate hydratase K01681 - 4.2.1.3 0.0 1402.0
DYD1_k127_4177475_1 Phytoene dehydrogenase K10027 - 1.3.99.26,1.3.99.28,1.3.99.29,1.3.99.31 4.251e-292 900.0
DYD1_k127_4177475_2 Phytoene synthase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001377 519.0
DYD1_k127_4177475_3 transcriptional regulator K22491 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005244 485.0
DYD1_k127_4177475_4 ATPase family associated with various cellular activities (AAA) K03924 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001337 326.0
DYD1_k127_4177475_5 AhpC/TSA family - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002759 319.0
DYD1_k127_4177475_6 hydroxylase K15746 - 1.14.15.24 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003197 306.0
DYD1_k127_4177475_7 alkyl hydroperoxide reductase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000001932 289.0
DYD1_k127_4177475_8 RNA polymerase K03088 - - 0.00000000000000000000000000000000000001866 146.0
DYD1_k127_4201593_0 Tyrosine recombinase XerC K04763 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001046 529.0
DYD1_k127_4201593_1 NADH dehydrogenase K03885 - 1.6.99.3 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000255 447.0
DYD1_k127_4201593_2 - - - - 0.000000000000000000000000000000000000000000000000000000000000000000000005028 246.0
DYD1_k127_4201593_3 - - - - 0.0000000000000000000000000000000000000000000000000000000000000002471 222.0
DYD1_k127_4205147_0 Helix-turn-helix domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005135 439.0
DYD1_k127_4205147_1 PIN domain - - - 0.000000000000000000000000001342 118.0
DYD1_k127_4205147_2 helix_turn_helix, arabinose operon control protein - - - 0.000000000000000006825 95.0
DYD1_k127_4205147_3 - - - - 0.000000000000002056 84.0
DYD1_k127_4205147_4 - - - - 0.000000000000003283 78.0
DYD1_k127_4205147_5 Lipocalin-like domain - - - 0.000000000000008256 79.0
DYD1_k127_4205147_6 - - - - 0.0002151 48.0
DYD1_k127_422216_0 PepSY-associated TM region K09939 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006421 304.0
DYD1_k127_422216_1 Protein of unknown function (DUF1211) - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002607 301.0
DYD1_k127_422216_2 Peptidase m28 - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000002339 272.0
DYD1_k127_4233892_0 Belongs to the alpha-IPM synthase homocitrate synthase family K09011 - 2.3.1.182 2.175e-309 950.0
DYD1_k127_4233892_1 Catalyzes the isomerization between 2-isopropylmalate and 3-isopropylmalate, via the formation of 2-isopropylmaleate K01703 - 4.2.1.33,4.2.1.35 1.487e-289 891.0
DYD1_k127_4233892_2 Catalyzes the isomerization between 2-isopropylmalate and 3-isopropylmalate, via the formation of 2-isopropylmaleate K01704 - 4.2.1.33,4.2.1.35 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001816 379.0
DYD1_k127_4242239_0 Peptidase dimerisation domain - - - 4.864e-277 856.0
DYD1_k127_4242239_1 The alpha subunit is responsible for the aldol cleavage of indoleglycerol phosphate to indole and glyceraldehyde 3- phosphate K01695 - 4.2.1.20 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004837 457.0
DYD1_k127_4242239_2 The beta subunit is responsible for the synthesis of L- tryptophan from indole and L-serine K01696,K01817 - 4.2.1.20,5.3.1.24 0.00000000000000000000000000000000000000000000000000000000000000000000000003729 250.0
DYD1_k127_4249760_0 Polysaccharide biosynthesis protein - - - 0.0 1134.0
DYD1_k127_4249760_1 Belongs to the DegT DnrJ EryC1 family - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001559 568.0
DYD1_k127_4265099_0 fatty acid desaturase K00508 - 1.14.19.3 2.903e-239 740.0
DYD1_k127_4265099_1 Aminotransferase K00812 - 2.6.1.1 7.481e-237 737.0
DYD1_k127_4265099_2 Specifically methylates the N7 position of a guanine in 16S rRNA K03501 GO:0000154,GO:0001510,GO:0003674,GO:0003824,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006139,GO:0006364,GO:0006396,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0008168,GO:0008170,GO:0008173,GO:0008649,GO:0008757,GO:0009451,GO:0009987,GO:0010467,GO:0016070,GO:0016072,GO:0016435,GO:0016740,GO:0016741,GO:0022613,GO:0031167,GO:0032259,GO:0034470,GO:0034641,GO:0034660,GO:0036265,GO:0042254,GO:0043170,GO:0043412,GO:0043414,GO:0044085,GO:0044237,GO:0044238,GO:0044260,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0070043,GO:0070475,GO:0070476,GO:0071704,GO:0071840,GO:0090304,GO:0140098,GO:0140102,GO:1901360 2.1.1.170 0.00000000000000000000000000000008766 124.0
DYD1_k127_4265099_3 Key enzyme in the regulation of glycerol uptake and metabolism. Catalyzes the phosphorylation of glycerol to yield sn- glycerol 3-phosphate K00864 GO:0003674,GO:0003824,GO:0004370,GO:0005975,GO:0006066,GO:0006071,GO:0006793,GO:0006796,GO:0008150,GO:0008152,GO:0009987,GO:0016301,GO:0016310,GO:0016740,GO:0016772,GO:0016773,GO:0019400,GO:0019751,GO:0044237,GO:0044238,GO:0044262,GO:0044281,GO:0071704,GO:1901615 2.7.1.30 0.00000000000000000000001832 100.0
DYD1_k127_4296749_0 permease - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008427 571.0
DYD1_k127_4296749_1 (SAM)-dependent - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002939 567.0
DYD1_k127_4307346_0 4-amino-4-deoxy-L-arabinose transferase and related glycosyltransferases of PMT family K07264 - 2.4.2.43 1.425e-215 672.0
DYD1_k127_4307346_1 PFAM Phosphatidic acid phosphatase type 2 haloperoxidase K19302 - 3.6.1.27 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003472 340.0
DYD1_k127_4307346_2 Mate efflux family protein K03327 - - 0.0000000000000000000000000000000000000000000000000001678 186.0
DYD1_k127_4307346_3 - - - - 0.000000000000000000000000000000000046 134.0
DYD1_k127_4316233_0 alanine dehydrogenase - - - 1.514e-220 689.0
DYD1_k127_4316233_1 Phage integrase family - - - 9.398e-208 651.0
DYD1_k127_4316233_2 Domain of unknown function K07053 - 3.1.3.97 1.915e-202 634.0
DYD1_k127_4316233_3 membrane K09781 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008511 448.0
DYD1_k127_4316233_4 small multidrug export protein - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000001504 270.0
DYD1_k127_4316233_5 Inner membrane protein CreD K06143 - - 0.00000000000000000000000000000000000000000000000003606 181.0
DYD1_k127_4316233_6 - - - - 0.000000000000000000000000000000005722 132.0
DYD1_k127_4316233_7 PFAM Transposase, IS4-like - - - 0.000007225 49.0
DYD1_k127_4316233_8 Winged helix-turn helix - - - 0.00001926 51.0
DYD1_k127_4318341_0 Outer membrane protein beta-barrel family - - - 2.96e-240 759.0
DYD1_k127_4318341_1 Methanol dehydrogenase K06872 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002114 419.0
DYD1_k127_4318341_2 LemA family K03744 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006713 351.0
DYD1_k127_4318341_3 TPM domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000001223 272.0
DYD1_k127_4318341_4 transcriptional regulator - - - 0.000000000000000000000000000000000000000000000000000008241 189.0
DYD1_k127_432284_0 Aldehyde dehydrogenase family K00128 - 1.2.1.3 2.118e-294 907.0
DYD1_k127_432284_1 Catalyzes the oxidative ring opening of 3- hydroxyanthranilate to 2-amino-3-carboxymuconate semialdehyde, which spontaneously cyclizes to quinolinate K00452 - 1.13.11.6 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009831 373.0
DYD1_k127_432284_2 fatty acid desaturase K03921 - 1.14.19.11,1.14.19.2,1.14.19.26 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005357 327.0
DYD1_k127_432284_3 rRNA binding - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000006491 262.0
DYD1_k127_432284_4 protein with SCP PR1 domains - - - 0.000000000000000000000000000000000000000000000000000000000000000000007791 237.0
DYD1_k127_432284_5 membrane K08987 - - 0.0000000000000000000000000000000000000000000000000000000003044 204.0
DYD1_k127_432284_6 Colicin V production protein K03558 - - 0.00000000000002527 73.0
DYD1_k127_4326157_0 Belongs to the sodium solute symporter (SSF) (TC 2.A.21) family - - - 0.0 1067.0
DYD1_k127_4326157_1 Starch-binding associating with outer membrane - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006601 600.0
DYD1_k127_4331143_0 peptidase M1 - - - 3.248e-239 741.0
DYD1_k127_4331143_1 Bacteriocin-protection protein - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008941 313.0
DYD1_k127_4331143_2 peptidase M1 - - - 0.000000000000000000000000000000000000000000000000000000000000000000000002034 245.0
DYD1_k127_4331143_3 Peptidase m28 - - - 0.0000000000000001743 78.0
DYD1_k127_4338509_0 Flavin transferase that catalyzes the transfer of the FMN moiety of FAD and its covalent binding to the hydroxyl group of a threonine residue in a target flavoprotein K03734 - 2.7.1.180 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003396 571.0
DYD1_k127_4338509_1 Protein of unknown function (DUF3570) - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001806 524.0
DYD1_k127_4338509_2 Rieske [2Fe-2S] domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000001097 262.0
DYD1_k127_4338509_3 Thioredoxin-like - - - 0.00000000000000000000000000000000000000000000000000000000000000005737 224.0
DYD1_k127_4338509_4 Domain of unknown function (DUF4266) - - - 0.0000000000000000000000000008756 113.0
DYD1_k127_4340349_0 Alkyl hydroperoxide reductase Thiol specific antioxidant Mal allergen - - - 9.158e-217 681.0
DYD1_k127_4340349_1 Belongs to the short-chain dehydrogenases reductases (SDR) family - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000238 484.0
DYD1_k127_4340349_2 Transaldolase is important for the balance of metabolites in the pentose-phosphate pathway K00616,K08314 - 2.2.1.2 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001457 417.0
DYD1_k127_4340349_3 abc transporter (atp-binding protein) - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002882 348.0
DYD1_k127_4340349_4 Glutamine cyclotransferase K00683 - 2.3.2.5 0.00000000000000000000000000000000000006923 144.0
DYD1_k127_4342685_0 AraC family transcriptional regulator - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000195 490.0
DYD1_k127_4342685_1 Bacterial regulatory proteins, tetR family - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009786 349.0
DYD1_k127_4342685_2 Antioxidant protein with alkyl hydroperoxidase activity. Required for the reduction of the AhpC active site cysteine residues and for the regeneration of the AhpC enzyme activity - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001379 309.0
DYD1_k127_4342685_3 Peptidase M16 - - - 0.0000000000000000000000012 104.0
DYD1_k127_4342685_4 Belongs to the pyruvate kinase family K00873 - 2.7.1.40 0.00000000000000000009463 88.0
DYD1_k127_4342685_5 - - - - 0.00000000004749 64.0
DYD1_k127_4359865_0 Pfam AP endonuclease family 2 C terminus - - - 4.306e-232 718.0
DYD1_k127_4359865_1 beta-1,4-mannooligosaccharide phosphorylase K20885,K21065 - 2.4.1.339,2.4.1.340,3.2.1.197 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004841 515.0
DYD1_k127_4359865_2 stress-induced protein - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001688 483.0
DYD1_k127_4359865_3 Domain of Unknown Function (DUF1080) - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000147 455.0
DYD1_k127_4359865_4 Domain of Unknown Function (DUF1080) - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000405 409.0
DYD1_k127_4359865_5 Catalyzes the reversible adenylation of nicotinate mononucleotide (NaMN) to nicotinic acid adenine dinucleotide (NaAD) K00969 - 2.7.7.18 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001301 375.0
DYD1_k127_4359865_6 Essential for recycling GMP and indirectly, cGMP K00942 GO:0003674,GO:0003824,GO:0004385,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006139,GO:0006163,GO:0006725,GO:0006753,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009116,GO:0009117,GO:0009119,GO:0009123,GO:0009126,GO:0009132,GO:0009135,GO:0009150,GO:0009161,GO:0009165,GO:0009167,GO:0009179,GO:0009185,GO:0009259,GO:0009987,GO:0016301,GO:0016310,GO:0016740,GO:0016772,GO:0016776,GO:0018130,GO:0019205,GO:0019438,GO:0019637,GO:0019693,GO:0034641,GO:0034654,GO:0042278,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0044424,GO:0044444,GO:0044464,GO:0046037,GO:0046128,GO:0046483,GO:0046710,GO:0046940,GO:0050145,GO:0055086,GO:0071704,GO:0072521,GO:0090407,GO:1901068,GO:1901135,GO:1901293,GO:1901360,GO:1901362,GO:1901564,GO:1901576,GO:1901657 2.7.4.8 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009819 367.0
DYD1_k127_4359865_7 COGs COG4405 conserved - - - 0.00000000000000000000000001746 108.0
DYD1_k127_4371645_0 shape-determining protein MreC K03570 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002933 440.0
DYD1_k127_4371645_1 rod shape-determining protein MreB K03569 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000001707 292.0
DYD1_k127_4371645_2 TIGRFAM rod shape-determining protein MreD - - - 0.00000000000000000001828 94.0
DYD1_k127_4376166_0 Highly conserved protein containing a thioredoxin domain K06888 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002942 538.0
DYD1_k127_4376166_1 mechanosensitive ion channel K03442 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001071 470.0
DYD1_k127_4376166_2 Peptidase, M22 K14742 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001205 358.0
DYD1_k127_4376166_3 Outer membrane efflux protein K12340 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002141 334.0
DYD1_k127_4392010_0 polysaccharide deacetylase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007242 591.0
DYD1_k127_4392010_1 haloacid dehalogenase K07025 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000399 261.0
DYD1_k127_4392010_2 - - - - 0.0000000000000000000000000000000000000000000000000000000000000185 219.0
DYD1_k127_4392010_3 long-chain fatty acid transport protein - - - 0.000000000000000007208 85.0
DYD1_k127_4395991_0 Belongs to the glycosyl hydrolase 5 (cellulase A) family K01179 - 3.2.1.4 2.178e-283 880.0
DYD1_k127_4395991_1 Belongs to the glycosyl hydrolase 30 family K01201 - 3.2.1.45 6.151e-196 617.0
DYD1_k127_4395991_2 - - - - 0.0000000000000000000000000000000000000000000000008976 177.0
DYD1_k127_4397855_0 Catalyzes the attachment of alanine to tRNA(Ala) in a two-step reaction alanine is first activated by ATP to form Ala- AMP and then transferred to the acceptor end of tRNA(Ala). Also edits incorrectly charged Ser-tRNA(Ala) and Gly-tRNA(Ala) via its editing domain K01872 GO:0003674,GO:0003824,GO:0004812,GO:0004813,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006082,GO:0006139,GO:0006396,GO:0006399,GO:0006400,GO:0006412,GO:0006418,GO:0006419,GO:0006518,GO:0006520,GO:0006725,GO:0006807,GO:0008033,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009451,GO:0009987,GO:0010467,GO:0016070,GO:0016597,GO:0016874,GO:0016875,GO:0019538,GO:0019752,GO:0031406,GO:0034470,GO:0034641,GO:0034645,GO:0034660,GO:0036094,GO:0043038,GO:0043039,GO:0043043,GO:0043167,GO:0043168,GO:0043170,GO:0043177,GO:0043412,GO:0043436,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044281,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0071704,GO:0090304,GO:0140098,GO:0140101,GO:1901360,GO:1901564,GO:1901566,GO:1901576 6.1.1.7 0.0 1599.0
DYD1_k127_4397855_1 Peptidase, M23 - - - 4.619e-201 627.0
DYD1_k127_4397855_2 Gscfa family - - - 0.000000000000000000000000000000000000000000000000000001944 193.0
DYD1_k127_4398628_0 Belongs to the type II topoisomerase GyrA ParC subunit family K02621 - - 9.411e-281 867.0
DYD1_k127_4398628_1 sterol desaturase - - - 1.39e-205 640.0
DYD1_k127_4398628_2 - - - - 0.0000000000000000000000000000000000000000000000000000000001825 207.0
DYD1_k127_4398628_3 helix-turn-helix domain protein - - - 0.000000000000000000000000000000000004867 139.0
DYD1_k127_4405850_0 Isocitrate dehydrogenase K00031 - 1.1.1.42 0.0 1023.0
DYD1_k127_4409094_0 Mitochondrial biogenesis AIM24 - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001541 476.0
DYD1_k127_4409094_1 Peptidase family S41 - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004179 384.0
DYD1_k127_4414731_0 UDP-N-acetylmuramyl pentapeptide phosphotransferase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006904 581.0
DYD1_k127_4414731_1 Glycosyl transferase 4-like domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003169 565.0
DYD1_k127_4414731_2 PFAM NAD dependent epimerase dehydratase family K01710 - 4.2.1.46 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005325 503.0
DYD1_k127_4414731_3 Heparinase II/III N-terminus - - - 0.000000000000000000000000000000000000000000000004758 178.0
DYD1_k127_4423896_0 amino acid aldolase or racemase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001037 566.0
DYD1_k127_4423896_1 Domain of unknown function (DUF3332) - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008371 374.0
DYD1_k127_4423896_2 May play a key role in the regulation of the intracellular concentration of adenosylhomocysteine K01251 GO:0000096,GO:0003674,GO:0003824,GO:0004013,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006082,GO:0006139,GO:0006520,GO:0006534,GO:0006555,GO:0006575,GO:0006725,GO:0006732,GO:0006790,GO:0006807,GO:0008150,GO:0008152,GO:0009066,GO:0009069,GO:0009116,GO:0009119,GO:0009987,GO:0016787,GO:0016801,GO:0016802,GO:0017144,GO:0019752,GO:0033353,GO:0034641,GO:0042278,GO:0043436,GO:0044237,GO:0044238,GO:0044281,GO:0044424,GO:0044444,GO:0044464,GO:0046128,GO:0046439,GO:0046483,GO:0046498,GO:0046500,GO:0051186,GO:0055086,GO:0071704,GO:0072521,GO:1901135,GO:1901360,GO:1901564,GO:1901605,GO:1901657 3.3.1.1 0.0000000000000427 74.0
DYD1_k127_4431583_0 gluconolactonase K01053 - 3.1.1.17 5.258e-301 934.0
DYD1_k127_4431583_1 Cupin domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002723 445.0
DYD1_k127_4431583_2 Aldolase/RraA - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007447 362.0
DYD1_k127_4431583_3 Xylose isomerase-like TIM barrel - - - 0.00000000000000000000000000000000000000000000000000000000000000000005277 233.0
DYD1_k127_4431583_4 Resolvase, N terminal domain - - - 0.00000005289 55.0
DYD1_k127_4442427_0 glutamine synthetase K01915 - 6.3.1.2 5.474e-210 653.0
DYD1_k127_4442427_1 glutamine synthetase K01915 - 6.3.1.2 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007292 537.0
DYD1_k127_4442427_2 Peptidase M56 - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001975 550.0
DYD1_k127_4442427_3 Ca2 Na antiporter K07301 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001607 514.0
DYD1_k127_4442427_4 transcriptional regulator - - - 0.0000000000000000000000000000000000000000000000000000000000001412 213.0
DYD1_k127_4463555_0 Glucuronate isomerase K01812 - 5.3.1.12 5.926e-251 782.0
DYD1_k127_4463555_1 Catalyzes the dehydration of D-mannonate K01686 - 4.2.1.8 1.025e-228 711.0
DYD1_k127_4463555_2 Short-chain dehydrogenase reductase sdr - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001371 355.0
DYD1_k127_4463555_3 COGs COG0524 Sugar kinase ribokinase family K00874 - 2.7.1.45 0.000001026 50.0
DYD1_k127_4493345_0 Secreted protein containing N-terminal Zinc-dependent carboxypeptidase related domain - - - 0.0 1081.0
DYD1_k127_4493345_1 Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family K00819 - 2.6.1.13 2.975e-252 781.0
DYD1_k127_4493345_2 CarboxypepD_reg-like domain - - - 1.626e-213 670.0
DYD1_k127_4493345_3 proteins, homologs of microcin C7 resistance protein MccF K01297 - 3.4.17.13 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003871 522.0
DYD1_k127_4493345_4 Outer membrane protein beta-barrel domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000009644 279.0
DYD1_k127_4500143_0 FAD dependent oxidoreductase - - - 1.741e-225 705.0
DYD1_k127_4500143_1 Oxidoreductase domain protein - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003505 424.0
DYD1_k127_4500143_2 Glucosamine-6-phosphate isomerases/6-phosphogluconolactonase K02080,K02564 - 3.5.99.6 0.0000000000000000000000000000000000000000000000000000000000000000000000002223 254.0
DYD1_k127_4500143_3 (twin-arginine translocation) pathway signal - - - 0.000000000000000000000000000000000000002635 154.0
DYD1_k127_4500143_4 The central subunit of the protein translocation channel SecYEG. Consists of two halves formed by TMs 1-5 and 6-10. These two domains form a lateral gate at the front which open onto the bilayer between TMs 2 and 7, and are clamped together by SecE at the back. The channel is closed by both a pore ring composed of hydrophobic SecY resides and a short helix (helix 2A) on the extracellular side of the membrane which forms a plug. The plug probably moves laterally to allow the channel to open. The ring and the pore may move independently K03076 - - 0.00000000000001839 74.0
DYD1_k127_450434_0 OST-HTH/LOTUS domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005193 487.0
DYD1_k127_450434_1 Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released K03086 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005765 454.0
DYD1_k127_450434_2 Protein involved in meta-pathway of phenol degradation - - - 0.000000000000000000000000000000000000000000000000001857 185.0
DYD1_k127_450434_3 Ribosomal protein S21 - - - 0.000000000000000000000005691 102.0
DYD1_k127_4512624_0 alanine symporter K03310 - - 1.861e-227 706.0
DYD1_k127_4512624_1 COG1555 DNA uptake protein and related DNA-binding - - - 0.0000000000000000000000000000000000000000000000000000016 196.0
DYD1_k127_4516221_0 Enoyl-(Acyl carrier protein) reductase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008868 543.0
DYD1_k127_4516221_1 AraC family transcriptional regulator - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002112 450.0
DYD1_k127_4516221_2 in asymptomatic bacteriuria E. coli strains 83972 and VR50, the ygiD gene is upregulated during biofilm formation in urine K15777 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003553 445.0
DYD1_k127_4516221_3 transcriptional regulator - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002164 325.0
DYD1_k127_4516221_4 YceI-like domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000001871 271.0
DYD1_k127_4516221_5 2-methylthioadenine synthetase K18707 - 2.8.4.5 0.0000000000000000000000001842 109.0
DYD1_k127_4519582_0 TonB-dependent receptor - - - 0.0 1395.0
DYD1_k127_4519582_1 GntP family permease K03299 - - 6.414e-225 702.0
DYD1_k127_4519582_2 Domain of unknown function (DUF4249) - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002988 430.0
DYD1_k127_4519582_3 Isocitrate dehydrogenase K00031 - 1.1.1.42 0.000000000000000000000007549 101.0
DYD1_k127_4522191_0 DNA helicase K03657 - 3.6.4.12 0.0 1460.0
DYD1_k127_4522191_1 Pyruvate 2-oxoglutarate dehydrogenase complex, dehydrogenase (E1) component, eukaryotic type K00615 - 2.2.1.1 4.656e-219 681.0
DYD1_k127_4522191_2 Glycosyl transferase family 2 K07011 - - 3.152e-196 614.0
DYD1_k127_4522191_3 DNA polymerase III K02340 - 2.7.7.7 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001651 591.0
DYD1_k127_4522191_4 flagellar motor protein K02557 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001062 540.0
DYD1_k127_4522191_5 Belongs to the SUA5 family - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001159 389.0
DYD1_k127_4522191_6 Restriction endonuclease, type I, EcoRI, R subunit Type III, Res subunit, N-terminal - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000006158 279.0
DYD1_k127_4522191_7 DoxX family K15977 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000309 247.0
DYD1_k127_4537892_0 damaged site, the DNA wraps around one UvrB monomer. DNA wrap is dependent on ATP binding by UvrB and probably causes local melting of the DNA helix, facilitating insertion of UvrB beta-hairpin between the DNA strands. Then UvrB probes one DNA strand for the presence of a lesion. If a lesion is found the UvrA subunits dissociate and the UvrB-DNA preincision complex is formed. This complex is subsequently bound by UvrC and the second UvrB is released. If no lesion is found, the DNA wraps around the other UvrB subunit that will check the other stand for damage K03702 - - 0.0 1250.0
DYD1_k127_4537892_1 Excinuclease ABC subunit B - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000009725 290.0
DYD1_k127_4537892_2 Belongs to the small heat shock protein (HSP20) family K13993 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000002166 265.0
DYD1_k127_4537892_3 Excinuclease ABC subunit B - - - 0.000000000000000000000000000000000000000000000000000000000000000000003138 237.0
DYD1_k127_4537892_4 - - - - 0.00000000000000000000000000000012 126.0
DYD1_k127_4539950_0 AraC family transcriptional regulator - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002547 570.0
DYD1_k127_4539950_1 Bacteriocin-protection, YdeI or OmpD-Associated - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001382 347.0
DYD1_k127_4539950_2 Activator of Hsp90 ATPase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000003874 271.0
DYD1_k127_4539950_3 Histidine kinase K09958 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000005072 268.0
DYD1_k127_4539950_4 DoxX-like family - - - 0.00000000000000000000000000000000000000000000000000000000000000004989 224.0
DYD1_k127_4539950_5 Bacteriocin-protection, YdeI or OmpD-Associated - - - 0.0000000000000000000000000000000000000000000000000000000004311 203.0
DYD1_k127_4539950_6 Arsr family transcriptional regulator - - - 0.00000000000000000000000000000000000000000000000000000003914 196.0
DYD1_k127_4539950_7 Glyoxalase-like domain - - - 0.00000000000000000000000000000000000000000000000000006949 188.0
DYD1_k127_4539950_8 monooxygenase activity - - - 0.0000000002722 62.0
DYD1_k127_454169_0 sterol desaturase - - - 1.948e-256 792.0
DYD1_k127_454169_1 Nucleotidyl transferase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002102 306.0
DYD1_k127_454169_2 Catalyzes the formation of phosphatidylethanolamine (PtdEtn) from phosphatidylserine (PtdSer) K01613 - 4.1.1.65 0.00000000000000000000000000000000000000000000000000000000000000000000005893 240.0
DYD1_k127_454169_3 Acyl CoA binding protein - - - 0.000000000000000000000000000000000002673 138.0
DYD1_k127_4553074_0 TonB-dependent receptor - - - 0.0 1176.0
DYD1_k127_4553074_1 Catalyzes the synthesis of 5,6-dihydrouridine (D), a modified base found in the D-loop of most tRNAs, via the reduction of the C5-C6 double bond in target uridines - - - 8.617e-206 641.0
DYD1_k127_4553074_2 ABC-type transport system involved in lipoprotein release permease component K09808,K09815 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003577 446.0
DYD1_k127_455566_0 - - - - 2.931e-207 647.0
DYD1_k127_455566_1 abc transporter (atp-binding protein) K01990 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004847 570.0
DYD1_k127_455566_2 Excinuclease ABC subunit B - - - 0.0000000000000000000000000000000000000000000000000000000000000703 214.0
DYD1_k127_4560264_0 Histidine kinase - - - 0.0 1244.0
DYD1_k127_4560264_1 Belongs to the GTP cyclohydrolase I type 2 NIF3 family - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009686 602.0
DYD1_k127_4560264_10 - - - - 0.000000000000000000000000000000000008196 137.0
DYD1_k127_4560264_2 Catalyzes the radical-mediated insertion of two sulfur atoms into the C-6 and C-8 positions of the octanoyl moiety bound to the lipoyl domains of lipoate-dependent enzymes, thereby converting the octanoylated domains into lipoylated derivatives K03644 - 2.8.1.8 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001069 581.0
DYD1_k127_4560264_3 Cell wall formation K00075 - 1.3.1.98 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004407 582.0
DYD1_k127_4560264_4 Belongs to the glyceraldehyde-3-phosphate dehydrogenase family K00134 - 1.2.1.12 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002302 577.0
DYD1_k127_4560264_5 Catalyzes the formation of oxalozcetate and L-glutamate from L-aspartate and 2-oxoglutarate K00812,K14260 - 2.6.1.1,2.6.1.2,2.6.1.66 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000147 540.0
DYD1_k127_4560264_6 Transfers the gamma-phosphate of ATP to the 4'-position of a tetraacyldisaccharide 1-phosphate intermediate (termed DS-1- P) to form tetraacyldisaccharide 1,4'-bis-phosphate (lipid IVA) K00912 - 2.7.1.130 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001341 471.0
DYD1_k127_4560264_7 Anti-sigma-K factor rskA - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004571 419.0
DYD1_k127_4560264_8 Belongs to the sigma-70 factor family. ECF subfamily K03088 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001825 343.0
DYD1_k127_4560264_9 Belongs to the sigma-70 factor family. ECF subfamily K03088 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001168 336.0
DYD1_k127_4562685_0 SBF-like CPA transporter family (DUF4137) K14347 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000253 329.0
DYD1_k127_4562685_1 - - - - 0.00000000000000000000000000000000000000000003759 164.0
DYD1_k127_4562685_2 - - - - 0.00000000000000000000000000000000007861 137.0
DYD1_k127_4568668_0 SusD family K21572 - - 6.047e-280 867.0
DYD1_k127_4568668_1 -O-antigen - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002143 398.0
DYD1_k127_4568668_2 TonB-linked outer membrane protein, SusC RagA family - - - 0.00000000000000000000005428 98.0
DYD1_k127_457311_0 Belongs to the peptidase S8 family - - - 2.796e-307 947.0
DYD1_k127_457311_1 beta-lactamase - - - 0.0000000000000000000000000000000000000000000000000000000000008623 210.0
DYD1_k127_457311_2 peptidase M1 - - - 0.0000000000000000000000000000000000000000000000001451 177.0
DYD1_k127_4601557_0 TonB-linked outer membrane protein, SusC RagA family - - - 5.929e-274 851.0
DYD1_k127_4601557_1 Starch-binding associating with outer membrane - - - 1.991e-210 663.0
DYD1_k127_4601557_2 Bacterial protein of unknown function (DUF885) - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000003311 265.0
DYD1_k127_4651401_0 membrane - - - 5.49e-228 711.0
DYD1_k127_4651401_1 Belongs to the sodium solute symporter (SSF) (TC 2.A.21) family K03307 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000002443 277.0
DYD1_k127_4651401_2 FAD dependent oxidoreductase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000009397 244.0
DYD1_k127_4654650_0 PFAM Glucose Sorbosone dehydrogenase K21430 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002522 576.0
DYD1_k127_4654650_1 membrane transporter protein K07090 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004507 415.0
DYD1_k127_4654650_2 Thrombospondin, type 3-like repeat - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006139 382.0
DYD1_k127_4654650_3 NADH dehydrogenase K03885 - 1.6.99.3 0.0000000000000001341 79.0
DYD1_k127_4657391_0 Sulfatase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000133 614.0
DYD1_k127_4657391_1 Belongs to the GHMP kinase family. GalK subfamily K00849 - 2.7.1.6 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000002452 292.0
DYD1_k127_4657391_2 Domain of Unknown Function (DUF1080) - - - 0.000000000000000000000000000000000000000000000000000000000000000000001491 246.0
DYD1_k127_4657391_3 Carbohydrate esterase, sialic acid-specific acetylesterase - - - 0.000000000002353 69.0
DYD1_k127_4665826_0 Catalyzes the formation of S-adenosylmethionine (AdoMet) from methionine and ATP. The overall synthetic reaction is composed of two sequential steps, AdoMet formation and the subsequent tripolyphosphate hydrolysis which occurs prior to release of AdoMet from the enzyme K00789 GO:0003674,GO:0003824,GO:0004478,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0016740,GO:0016765,GO:0044424,GO:0044444,GO:0044464 2.5.1.6 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003137 524.0
DYD1_k127_4665826_1 deoxynucleoside kinase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001302 406.0
DYD1_k127_4665826_2 PA-phosphatase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000002282 280.0
DYD1_k127_4681770_0 Response regulator containing CheY-like receiver AAA-type ATPase and DNA-binding domains - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008265 469.0
DYD1_k127_4681770_1 - - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008752 314.0
DYD1_k127_4681770_2 nucleotide phosphotransferase - - - 0.0000000000000000000000000000000000000001937 151.0
DYD1_k127_4701119_0 Functions in the N-end rule pathway of protein degradation where it conjugates Leu, Phe and, less efficiently, Met from aminoacyl-tRNAs to the N-termini of proteins containing an N-terminal arginine or lysine K00684 - 2.3.2.6 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003861 376.0
DYD1_k127_4701119_1 His Kinase A (phosphoacceptor) domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000003617 280.0
DYD1_k127_4701119_2 Domain of unknown function (DUF3127) - - - 0.000000000000000000000000000000000000000000000000000000000000000000000004057 244.0
DYD1_k127_4701119_3 Protein of unknown function (DUF2490) - - - 0.0000000000000000000000000000000000000000000000000000004288 198.0
DYD1_k127_4758447_0 Belongs to the KdsA family K01627 - 2.5.1.55 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002715 506.0
DYD1_k127_4758447_1 - - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001858 326.0
DYD1_k127_4758447_2 - - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000007589 302.0
DYD1_k127_4758447_3 gtp-binding protein typa K06207 - - 0.000000000000000000000000000000000000005223 145.0
DYD1_k127_4758447_4 Tonb-dependent siderophore receptor K02014 - - 0.000000000000000000000000000007299 121.0
DYD1_k127_4763344_0 Belongs to the BshC family K22136 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004656 475.0
DYD1_k127_4763344_1 Secreted protein containing N-terminal Zinc-dependent carboxypeptidase related domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000006569 286.0
DYD1_k127_4782705_0 Catalyzes the interconversion of 2-phosphoglycerate and 3-phosphoglycerate K15633 - 5.4.2.12 9.037e-261 805.0
DYD1_k127_4782705_1 Methionine aminopeptidase K01265 - 3.4.11.18 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004425 541.0
DYD1_k127_4799393_0 L-sorbosone dehydrogenase - - - 4.526e-212 663.0
DYD1_k127_4799393_1 Domain of unknown function (DUF4251) - - - 0.000000000000000000000000000000008994 129.0
DYD1_k127_4812694_0 Sulfatase-modifying factor enzyme 1 - - - 3.501e-194 610.0
DYD1_k127_4812694_1 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002849 502.0
DYD1_k127_4812694_2 Beta-lactamase enzyme family K17836 - 3.5.2.6 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001517 381.0
DYD1_k127_4835961_0 Protein related to penicillin acylase K01434 - 3.5.1.11 0.0 1400.0
DYD1_k127_4835961_1 magnesium chelatase K07391 - - 2.354e-296 913.0
DYD1_k127_4835961_2 Thiol disulfide interchange protein K04084 - 1.8.1.8 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001462 590.0
DYD1_k127_4835961_3 H( )-stimulated, divalent metal cation uptake system - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006853 577.0
DYD1_k127_4835961_4 - - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000001324 257.0
DYD1_k127_4835961_5 Cupin 2, conserved barrel domain protein - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000704 250.0
DYD1_k127_4859318_0 Transglutaminase-like - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001332 354.0
DYD1_k127_4871562_0 RNA polymerase that catalyzes the synthesis of short RNA molecules used as primers for DNA polymerase during DNA replication K02316 - - 0.0 1199.0
DYD1_k127_4871562_1 Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006621 371.0
DYD1_k127_4871562_2 X-Pro dipeptidyl-peptidase C-terminal non-catalytic domain K01281 - 3.4.14.11 0.000000000000000000000000000000000006099 139.0
DYD1_k127_487784_0 lysine biosynthetic process via aminoadipic acid - - - 3.82e-273 843.0
DYD1_k127_487784_1 peptidase M1 K01256 - 3.4.11.2 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006862 491.0
DYD1_k127_4881066_0 DJ-1/PfpI family - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002745 344.0
DYD1_k127_4881066_1 Arabinose-binding domain of AraC transcription regulator, N-term - - - 0.000000000000000000000000000000000000000000000000000000000000000002872 237.0
DYD1_k127_4881066_2 Activator of Hsp90 ATPase homolog 1-like protein - - - 0.0000000000000000000000000000000000000000000000000000000000000000634 225.0
DYD1_k127_4881066_3 MatE - - - 0.000000000000000000000000000000000008244 138.0
DYD1_k127_488115_0 FAD linked K06911 - - 2.172e-254 789.0
DYD1_k127_488115_1 transporter subunit of ABC superfamily ATP-binding component - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003481 500.0
DYD1_k127_4930083_0 A type II topoisomerase that negatively supercoils closed circular double-stranded (ds) DNA in an ATP-dependent manner to modulate DNA topology and maintain chromosomes in an underwound state. Negative supercoiling favors strand separation, and DNA replication, transcription, recombination and repair, all of which involve strand separation. Also able to catalyze the interconversion of other topological isomers of dsDNA rings, including catenanes and knotted rings. Type II topoisomerases break and join 2 DNA strands simultaneously in an ATP-dependent manner K02469 - 5.99.1.3 0.0 1546.0
DYD1_k127_4930083_1 tetratricopeptide repeat - - - 3.241e-230 717.0
DYD1_k127_4930083_2 Belongs to the ClpA ClpB family K03696 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006924 422.0
DYD1_k127_4930083_3 Hydrolase Nlp P60 - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003261 359.0
DYD1_k127_4943541_0 Carbohydrate family 9 binding domain-like - - - 0.0 1099.0
DYD1_k127_4943541_1 Fumarylacetoacetase K01555 - 3.7.1.2 5.997e-251 776.0
DYD1_k127_4943541_2 Aminotransferase class I and II K00817 - 2.6.1.9 7.125e-208 650.0
DYD1_k127_4943541_3 Conserved protein domain typically associated with flavoprotein - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003472 504.0
DYD1_k127_4943541_4 homogentisate 12-dioxygenase K00451 - 1.13.11.5 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001074 375.0
DYD1_k127_4943541_5 - - - - 0.000000000000000000000000000000000000000000000000000000288 200.0
DYD1_k127_4963184_0 Glycosyltransferase like family 2 - - - 5.195e-194 606.0
DYD1_k127_4963184_1 4-amino-4-deoxy-L-arabinose transferase and related glycosyltransferases of PMT family K07264 - 2.4.2.43 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000008398 286.0
DYD1_k127_4963184_2 Lysylphosphatidylglycerol synthase TM region K07027 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000009176 269.0
DYD1_k127_4965651_0 Peptidase M16 - - - 0.0 1015.0
DYD1_k127_4965651_1 Peptidase M16 - - - 0.00000000000000000000000000000000000000007575 151.0
DYD1_k127_4983067_0 Part of the Sec protein translocase complex. Interacts with the SecYEG preprotein conducting channel. Has a central role in coupling the hydrolysis of ATP to the transfer of proteins into and across the cell membrane, serving as an ATP-driven molecular motor driving the stepwise translocation of polypeptide chains across the membrane K03070 GO:0000166,GO:0003674,GO:0003824,GO:0005215,GO:0005488,GO:0005524,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005886,GO:0005887,GO:0006810,GO:0008104,GO:0008144,GO:0008150,GO:0008320,GO:0008565,GO:0015031,GO:0015399,GO:0015405,GO:0015440,GO:0015450,GO:0015462,GO:0015833,GO:0016020,GO:0016021,GO:0016462,GO:0016787,GO:0016817,GO:0016818,GO:0016887,GO:0017076,GO:0017111,GO:0022804,GO:0022857,GO:0022884,GO:0030554,GO:0031224,GO:0031226,GO:0031522,GO:0032553,GO:0032555,GO:0032559,GO:0032991,GO:0033036,GO:0033220,GO:0035639,GO:0036094,GO:0042623,GO:0042626,GO:0042886,GO:0042887,GO:0043167,GO:0043168,GO:0043492,GO:0043952,GO:0044424,GO:0044425,GO:0044444,GO:0044459,GO:0044464,GO:0045184,GO:0051179,GO:0051234,GO:0055085,GO:0071702,GO:0071705,GO:0071806,GO:0071944,GO:0097159,GO:0097367,GO:1901265,GO:1901363,GO:1904680 - 0.0 1304.0
DYD1_k127_4983067_1 PFAM Signal transduction histidine kinase, subgroup 2, dimerisation and phosphoacceptor domain - - - 8.456e-221 690.0
DYD1_k127_4983067_2 Has an important function as a repair enzyme for proteins that have been inactivated by oxidation. Catalyzes the reversible oxidation-reduction of methionine sulfoxide in proteins to methionine K07304 - 1.8.4.11 0.00000000000000000000000000000000000000000000000000000000000000000000000000001085 261.0
DYD1_k127_4983067_3 - - - - 0.0000000000000000000002483 98.0
DYD1_k127_5019378_0 cytochrome c biogenesis - - - 0.0 1911.0
DYD1_k127_5019378_1 Multidrug transporter MatE K03327 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002106 584.0
DYD1_k127_5019378_2 converts alpha-aldose to the beta-anomer - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003672 457.0
DYD1_k127_5019378_3 LmbE family - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003794 399.0
DYD1_k127_5019378_4 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase K03270 - 3.1.3.45 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009113 346.0
DYD1_k127_5019378_5 Maf-like protein K06287 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005166 303.0
DYD1_k127_5019378_6 NADP oxidoreductase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000007994 253.0
DYD1_k127_5019378_7 Domain of Unknown Function (DUF1206) - - - 0.000000000000000000000000000000000000000000000000003793 192.0
DYD1_k127_5043112_0 PAP2 superfamily - - - 2.975e-274 844.0
DYD1_k127_5043112_1 Cysteine methyltransferase K10778 - 2.1.1.63 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000242 520.0
DYD1_k127_5043112_2 DNA-binding protein - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005187 443.0
DYD1_k127_5043112_3 Oxygenase, catalysing oxidative methylation of damaged DNA K09990 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001209 437.0
DYD1_k127_5043112_4 Alkylated DNA repair protein - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006695 369.0
DYD1_k127_5043112_5 2OG-Fe(II) oxygenase - - - 0.0000000000000000000000001469 107.0
DYD1_k127_5059790_0 Catalyzes the conversion of dethiobiotin (DTB) to biotin by the insertion of a sulfur atom into dethiobiotin via a radical- based mechanism K01012 - 2.8.1.6 1.861e-223 694.0
DYD1_k127_5059790_1 Cupin-like domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000001805 284.0
DYD1_k127_5059790_2 Belongs to the beta-ketoacyl-ACP synthases family - - - 0.0000000000000000000000000000000005535 132.0
DYD1_k127_5061689_0 Outer membrane protein protective antigen OMA87 - - - 0.0 1216.0
DYD1_k127_5061689_1 fructose-bisphosphate aldolase K01624 - 4.1.2.13 3.851e-218 679.0
DYD1_k127_5087951_0 Belongs to the 5'-nucleotidase family K01081 - 3.1.3.5 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003343 557.0
DYD1_k127_5087951_1 5'-nucleotidase K01081 - 3.1.3.5 0.00000000000000000000000000000000000000000000000000000000000000000009921 232.0
DYD1_k127_5105587_0 Response regulator of the LytR AlgR family - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000186 405.0
DYD1_k127_5105587_1 Histidine kinase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000284 364.0
DYD1_k127_5105587_2 Gluconate 2-dehydrogenase subunit 3 - - - 0.00000000000000002199 81.0
DYD1_k127_5109952_0 Membrane protease subunits, stomatin prohibitin homologs - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002478 319.0
DYD1_k127_5109952_1 YtxH-like protein - - - 0.00000000000000000000000000000000000000000000003006 172.0
DYD1_k127_5109952_2 Catalyzes a two-step reaction, first charging a glutamine molecule by linking its carboxyl group to the alpha-phosphate of ATP, followed by transfer of the aminoacyl-adenylate to its tRNA K01886 - 6.1.1.18 0.000000000000000000000000000000000000000001098 156.0
DYD1_k127_5109952_3 Competence protein - - - 0.00000000000000000000000000000000258 131.0
DYD1_k127_5113951_0 cyclic nucleotide-binding - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009241 302.0
DYD1_k127_5113951_1 Antioxidant protein with alkyl hydroperoxidase activity. Required for the reduction of the AhpC active site cysteine residues and for the regeneration of the AhpC enzyme activity - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000611 260.0
DYD1_k127_5113951_2 Belongs to the N-Me-Phe pilin family - - - 0.0000000000000000000000000000000000000000005106 161.0
DYD1_k127_5113951_3 - - - - 0.000000000000000000000000143 110.0
DYD1_k127_5113951_4 Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family K03585 - - 0.0000000009091 61.0
DYD1_k127_5126178_0 Tetratricopeptide repeat - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003551 600.0
DYD1_k127_5126178_1 mechanosensitive ion channel - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000134 291.0
DYD1_k127_5126178_2 Mediates influx of magnesium ions K03284 - - 0.000000000000000000000002956 106.0
DYD1_k127_5135052_0 Putative MetA-pathway of phenol degradation - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004416 552.0
DYD1_k127_5135052_1 GTP cyclohydrolase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001628 483.0
DYD1_k127_5135052_2 PFAM Bacterial membrane protein YfhO - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002813 319.0
DYD1_k127_5135052_3 Domain of unknown function (DUF4834) - - - 0.0000000000000000000000000000000000768 134.0
DYD1_k127_5137422_0 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006673 555.0
DYD1_k127_5137422_1 Amino acid ABC transporter substrate-binding protein K09969 - - 0.0000008305 54.0
DYD1_k127_5162426_0 Peptide chain release factor 1 directs the termination of translation in response to the peptide chain termination codons UAG and UAA K02835 - - 2.314e-218 679.0
DYD1_k127_5162426_1 Belongs to the OMP decarboxylase family. Type 2 subfamily K01591 GO:0003674,GO:0003824,GO:0004590,GO:0006139,GO:0006206,GO:0006207,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009112,GO:0009987,GO:0016829,GO:0016830,GO:0016831,GO:0018130,GO:0019856,GO:0034641,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0046112,GO:0046483,GO:0055086,GO:0071704,GO:0072527,GO:0072528,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576 4.1.1.23 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004536 482.0
DYD1_k127_5162426_2 Protein of unknown function (DUF4197) - - - 0.000000000000000000000000000000000000000000003692 164.0
DYD1_k127_5162426_3 - - - - 0.0000000000000000000000001827 106.0
DYD1_k127_5205551_0 ABC-type transport system involved in lipoprotein release permease component K09808 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007279 514.0
DYD1_k127_5205551_1 Aldose 1-epimerase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002292 381.0
DYD1_k127_5209025_0 COG0491 Zn-dependent hydrolases, including glyoxylases - - - 2.18e-290 894.0
DYD1_k127_5209025_1 Sterol desaturase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001199 313.0
DYD1_k127_5209025_2 rhodanese-related sulfurtransferase - - - 0.00000000000000000000000000000000000000000000000000000000008722 205.0
DYD1_k127_5209025_3 Sulfate permease and related K03321 - - 0.0000000000000000000000000000000000000000000000000000000001949 203.0
DYD1_k127_5210572_0 COG1228 Imidazolonepropionase and related - - - 1.959e-265 820.0
DYD1_k127_5210572_1 COG1228 Imidazolonepropionase and related - - - 2.601e-225 703.0
DYD1_k127_5225765_0 cytochrome C peroxidase K00428 - 1.11.1.5 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004878 540.0
DYD1_k127_5225765_1 Protein involved in meta-pathway of phenol degradation - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003524 317.0
DYD1_k127_5225765_2 - - - - 0.000000000000000000000000000000000000009619 146.0
DYD1_k127_5232146_0 of ABC transporters with duplicated ATPase K06158 - - 0.0 1124.0
DYD1_k127_5232146_1 Glycosyl hydrolases family 16 - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000144 451.0
DYD1_k127_5232146_2 PFAM Leucine Rich Repeat - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005192 449.0
DYD1_k127_5232146_3 fad dependent oxidoreductase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001267 332.0
DYD1_k127_5232146_4 Protein of unknown function (DUF983) - - - 0.00000000000000000000000000000000000000000000000000000000000000000001754 234.0
DYD1_k127_5232146_5 Cysteine-rich CPXCG - - - 0.0000000000000000000000000009858 114.0
DYD1_k127_5234459_0 Flavoprotein K07007 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001316 431.0
DYD1_k127_5234459_1 glycerophosphoryl diester phosphodiesterase K01126 - 3.1.4.46 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001168 362.0
DYD1_k127_5234459_2 - - - - 0.000000000000000000000000000000000000000000000000000000004485 202.0
DYD1_k127_5234459_3 Alpha amylase, catalytic domain - - - 0.000000000000000000000000000000000000000000000000003277 183.0
DYD1_k127_5278166_0 Provides the precursors necessary for DNA synthesis. Catalyzes the biosynthesis of deoxyribonucleotides from the corresponding ribonucleotides K00525 - 1.17.4.1 0.0 1148.0
DYD1_k127_5278166_1 Ribonucleotide Reductase K00526 - 1.17.4.1 1.756e-258 799.0
DYD1_k127_5278166_2 Catalyzes the transfer of a methyl group from 5- methyltetrahydrofolate to homocysteine resulting in methionine formation K00549 - 2.1.1.14 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005363 437.0
DYD1_k127_5278166_3 Domain of unknown function (DUF4625) - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001258 355.0
DYD1_k127_5278166_4 Domain of unknown function (DUF4625) - - - 0.00000000000000000000000000000000000000000000000000000000000000006381 226.0
DYD1_k127_5301320_0 TonB-linked outer membrane protein, SusC RagA family - - - 1.062e-286 887.0
DYD1_k127_5301320_1 iron ion homeostasis - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000002293 267.0
DYD1_k127_5310072_0 Na H antiporter NhaD and related arsenite - - - 1.959e-263 815.0
DYD1_k127_5310072_1 acyl-CoA dehydrogenase - - - 5.489e-221 688.0
DYD1_k127_5310072_2 Glutamate synthase K00265,K00284 - 1.4.1.13,1.4.1.14,1.4.7.1 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006209 504.0
DYD1_k127_5323555_0 Redoxin - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003235 316.0
DYD1_k127_5323555_1 Thioredoxin - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000009827 269.0
DYD1_k127_5323555_2 transcriptional regulator - - - 0.00000000000000000000000000000000000000000000000000000000000000002733 231.0
DYD1_k127_5323555_3 nitroreductase - - - 0.0000000000000000000000000000000000000000000000007052 175.0
DYD1_k127_5331684_0 Metalloenzyme superfamily - - - 4.273e-300 926.0
DYD1_k127_5331684_1 Starch-binding associating with outer membrane - - - 6.611e-252 783.0
DYD1_k127_5331684_2 competence protein COMEC - - - 4.553e-242 752.0
DYD1_k127_5331684_3 TonB dependent receptor - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004588 472.0
DYD1_k127_5331684_4 Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family K00823 - 2.6.1.19 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007086 305.0
DYD1_k127_5346098_0 Peptidase m28 - - - 4.454e-235 731.0
DYD1_k127_5346098_1 CBS domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001219 316.0
DYD1_k127_5346098_2 - - - - 0.000000000000000000000002046 102.0
DYD1_k127_5368316_0 TonB-dependent receptor - - - 0.0 1238.0
DYD1_k127_5368316_1 Starch-binding associating with outer membrane - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006362 430.0
DYD1_k127_5368316_2 COG3279 Response regulator of the LytR AlgR family K02477 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000006296 279.0
DYD1_k127_5368316_3 Histidine kinase - - - 0.0000000000000000000000000000000000000000000000000000000000000000002431 239.0
DYD1_k127_5368316_4 Lipid-binding putative hydrolase - - - 0.0000000000000000000000000000000000000000000000000000000000000003089 224.0
DYD1_k127_5368316_5 Peptidase S8 and S53 subtilisin kexin sedolisin - - - 0.0000000000000000000000000000000000000000000144 175.0
DYD1_k127_5368316_6 Domain of unknown function (DUF5011) - - - 0.0000000007514 67.0
DYD1_k127_538221_0 Catalyzes the ATP-dependent conversion of 5- aminoimidazole ribonucleotide (AIR) and HCO(3)(-) to N5- carboxyaminoimidazole ribonucleotide (N5-CAIR) K01589 - 6.3.4.18 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001145 454.0
DYD1_k127_538221_1 Catalyzes the conversion of N5-carboxyaminoimidazole ribonucleotide (N5-CAIR) to 4-carboxy-5-aminoimidazole ribonucleotide (CAIR) K01588 - 5.4.99.18 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000003301 293.0
DYD1_k127_538221_2 peptidase K01284,K01414 - 3.4.15.5,3.4.24.70 0.00000000000000000000000000000000000000000000000000000001682 199.0
DYD1_k127_5414312_0 3'-5' exoribonuclease that releases 5'-nucleoside monophosphates and is involved in maturation of structured RNAs K12573,K12585 - - 0.0 1211.0
DYD1_k127_5414312_1 Ribose 5-phosphate isomerase K01808 - 5.3.1.6 0.0000000000000000000000000000007911 121.0
DYD1_k127_5427535_0 DoxX family - - - 1.655e-208 651.0
DYD1_k127_5427535_1 Ribosomal protein L11 methyltransferase K02687 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006413 503.0
DYD1_k127_5427535_2 Involved in the gluconeogenesis. Catalyzes stereospecifically the conversion of dihydroxyacetone phosphate (DHAP) to D-glyceraldehyde-3-phosphate (G3P) K01803 GO:0003674,GO:0003824,GO:0004807,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005975,GO:0005996,GO:0006006,GO:0006066,GO:0006071,GO:0006081,GO:0006082,GO:0006090,GO:0006091,GO:0006094,GO:0006096,GO:0006139,GO:0006163,GO:0006164,GO:0006165,GO:0006725,GO:0006732,GO:0006733,GO:0006753,GO:0006754,GO:0006757,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0009056,GO:0009058,GO:0009108,GO:0009117,GO:0009123,GO:0009124,GO:0009126,GO:0009127,GO:0009132,GO:0009135,GO:0009141,GO:0009142,GO:0009144,GO:0009145,GO:0009150,GO:0009152,GO:0009156,GO:0009161,GO:0009165,GO:0009166,GO:0009167,GO:0009168,GO:0009179,GO:0009185,GO:0009199,GO:0009201,GO:0009205,GO:0009206,GO:0009259,GO:0009260,GO:0009987,GO:0016051,GO:0016052,GO:0016053,GO:0016310,GO:0016853,GO:0016860,GO:0016861,GO:0017144,GO:0018130,GO:0019318,GO:0019319,GO:0019359,GO:0019362,GO:0019363,GO:0019400,GO:0019405,GO:0019438,GO:0019439,GO:0019563,GO:0019637,GO:0019682,GO:0019693,GO:0019751,GO:0019752,GO:0032787,GO:0034404,GO:0034641,GO:0034654,GO:0034655,GO:0042866,GO:0043436,GO:0044237,GO:0044238,GO:0044248,GO:0044249,GO:0044262,GO:0044270,GO:0044271,GO:0044275,GO:0044281,GO:0044282,GO:0044283,GO:0044424,GO:0044444,GO:0044464,GO:0046031,GO:0046034,GO:0046164,GO:0046166,GO:0046174,GO:0046184,GO:0046364,GO:0046390,GO:0046394,GO:0046434,GO:0046483,GO:0046496,GO:0046700,GO:0046939,GO:0051186,GO:0051188,GO:0055086,GO:0071704,GO:0072330,GO:0072521,GO:0072522,GO:0072524,GO:0072525,GO:0090407,GO:1901135,GO:1901137,GO:1901292,GO:1901293,GO:1901360,GO:1901361,GO:1901362,GO:1901564,GO:1901566,GO:1901575,GO:1901576,GO:1901615,GO:1901616 5.3.1.1 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004766 421.0
DYD1_k127_5427535_3 - - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000006253 287.0
DYD1_k127_5427535_4 COG1167 Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain (MocR family) and their eukaryotic orthologs K00375 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000008154 270.0
DYD1_k127_5427535_5 Belongs to the ClpS family K06891 - - 0.00000000000000000000000000000000000000000000002525 170.0
DYD1_k127_5494821_0 Beta-lactamase - - - 1.613e-238 738.0
DYD1_k127_5494821_1 Pyruvate phosphate dikinase K01007 - 2.7.9.2 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004436 493.0
DYD1_k127_5520741_0 UDP-glucose 4-epimerase K01784 - 5.1.3.2 4.19e-196 614.0
DYD1_k127_5520741_1 Belongs to the DegT DnrJ EryC1 family - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000484 300.0
DYD1_k127_5534804_0 PFAM Bacterial membrane protein YfhO - - - 2.279e-244 761.0
DYD1_k127_5534804_1 Glycosyltransferase Family 4 - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002216 407.0
DYD1_k127_5552203_0 synthase K00648 - 2.3.1.180 1.46e-197 619.0
DYD1_k127_5552203_1 glycosyl transferase family 2 - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007067 485.0
DYD1_k127_5552203_2 3-demethylubiquinone-9 3-O-methyltransferase activity - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004093 330.0
DYD1_k127_5552203_3 N-Acetylmuramoyl-L-alanine amidase - - - 0.00000000000000000000000000000000000000000000000000000000000003897 222.0
DYD1_k127_5594688_0 Starch-binding associating with outer membrane - - - 1.577e-218 689.0
DYD1_k127_5594688_1 PFAM TonB-dependent Receptor Plug K02014 - - 8.52e-199 632.0
DYD1_k127_5594688_2 Xylose isomerase-like TIM barrel K01816 - 5.3.1.22 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001342 515.0
DYD1_k127_5594688_3 Sulfatase-modifying factor enzyme 1 - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002206 515.0
DYD1_k127_5594688_4 Oxidoreductase family, NAD-binding Rossmann fold - - - 0.00000000000000000000000000000000000000000001617 163.0
DYD1_k127_5597716_0 SusD family K21572 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008021 572.0
DYD1_k127_5597716_1 TonB dependent receptor - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003731 333.0
DYD1_k127_5597716_2 Domain of unknown function (DUF4974) - - - 0.00000000000000000000000000000000000000000000000000000000000000003178 234.0
DYD1_k127_5597716_3 Sigma-70, region 4 K03088 - - 0.0000000000000000000000000000000000000000005169 164.0
DYD1_k127_5600936_0 radical SAM domain protein - - - 3.61e-238 737.0
DYD1_k127_5600936_1 Catalyzes the reversible reaction in which hydroxymethyl group from 5,10-methylenetetrahydrofolate is transferred onto alpha-ketoisovalerate to form ketopantoate K00606 - 2.1.2.11 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001504 501.0
DYD1_k127_5600936_2 Pseudouridine synthase K06177,K06180 - 5.4.99.23,5.4.99.28,5.4.99.29 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003751 398.0
DYD1_k127_5600936_3 Serine dehydratase K01752 - 4.3.1.17 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001249 346.0
DYD1_k127_5600936_4 - - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000005708 251.0
DYD1_k127_561089_0 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase - - - 8.958e-234 732.0
DYD1_k127_561089_1 - - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007382 449.0
DYD1_k127_561089_2 COGs COG0745 Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain K07667 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001132 385.0
DYD1_k127_561089_3 HTH-like domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001139 339.0
DYD1_k127_561089_4 repeat protein - - - 0.0000000000000000000000000000000000000000005517 162.0
DYD1_k127_561089_5 - - - - 0.0000000000000000000000000000000000000001293 169.0
DYD1_k127_561089_6 PFAM transposase IS3 IS911 family protein K07497 - - 0.0000000000000000000000000000000000000001696 151.0
DYD1_k127_5611752_0 Belongs to the IlvD Edd family K01687 - 4.2.1.9 0.0 1024.0
DYD1_k127_5611752_1 acetolactate synthase K01652 - 2.2.1.6 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001498 469.0
DYD1_k127_5611752_2 Allophanate hydrolase subunit 1 K06351 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000108 437.0
DYD1_k127_5611752_3 Belongs to the UPF0271 (lamB) family K07160 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008159 345.0
DYD1_k127_5611752_4 Allophanate hydrolase subunit 2 K06350 - - 0.00000000000000000000000000000000000000000000000000000000000000000001498 242.0
DYD1_k127_5611752_5 H( )-stimulated, divalent metal cation uptake system - - - 0.000001438 50.0
DYD1_k127_5621475_0 2-hydroxyhepta-2,4-diene-1,7-dioate isomerase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002329 382.0
DYD1_k127_5621475_1 Belongs to the CinA family K03742,K03743 - 3.5.1.42 0.00000000000000000000000000000000000000000000000000000001305 198.0
DYD1_k127_5621475_2 (Hpt) domain - - - 0.0000000000000000000000000000000000000000000000000000009896 193.0
DYD1_k127_5621475_3 DNA polymerase III K02342 - 2.7.7.7 0.0000000000000000000000000000000000000000000000000008372 184.0
DYD1_k127_5625175_0 decarboxylase K01585 - 4.1.1.19 3.518e-305 936.0
DYD1_k127_5625175_1 Belongs to the arginase family K01480 - 3.5.3.11 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001742 439.0
DYD1_k127_5634245_0 Peptidase S8 and S53 subtilisin kexin sedolisin - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001027 321.0
DYD1_k127_5634245_1 luxR family - - - 0.0000000000000000000000000000000000008833 144.0
DYD1_k127_5724887_0 Endonuclease/Exonuclease/phosphatase family - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000002614 285.0
DYD1_k127_5724887_1 WbqC-like protein - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000002403 273.0
DYD1_k127_5724887_2 - - - - 0.00000000000000000000000000000000000003198 145.0
DYD1_k127_5727390_0 CAAX amino terminal protease family K07052 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005599 524.0
DYD1_k127_5727390_1 mandelate racemase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004802 438.0
DYD1_k127_5727390_2 COGs COG0318 Acyl-CoA synthetase (AMP-forming) AMP-acid ligase II K01911 - 6.2.1.26 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002677 379.0
DYD1_k127_5727390_3 TonB-dependent receptor plug - - - 0.000000000000000000000000002266 120.0
DYD1_k127_5733817_0 Peptidase M14 - - - 3.368e-257 798.0
DYD1_k127_5733817_1 N-acetylmuramoyl-L-alanine amidase K01447 - 3.5.1.28 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002145 382.0
DYD1_k127_5733817_2 Domain of Unknown Function (DUF1080) - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001077 331.0
DYD1_k127_5733817_3 Domain of Unknown Function (DUF1080) - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000001101 254.0
DYD1_k127_5733817_4 3D domain protein - - - 0.0000000000000000000000000000000000000000000000000003322 184.0
DYD1_k127_5733817_5 - - - - 0.00000000000003459 74.0
DYD1_k127_5745311_0 PFAM Vitamin K-dependent gamma-carboxylase - - - 8.973e-243 754.0
DYD1_k127_5745311_1 Belongs to the ribF family K11753 - 2.7.1.26,2.7.7.2 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007787 531.0
DYD1_k127_5745311_2 seryl-tRNA synthetase K01875 - 6.1.1.11 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002225 305.0
DYD1_k127_5745311_3 Metallo-peptidase family M12B Reprolysin-like - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000009346 289.0
DYD1_k127_5756403_0 Belongs to the sodium solute symporter (SSF) (TC 2.A.21) family - - - 1.008e-318 981.0
DYD1_k127_5756403_1 LmbE family - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002223 565.0
DYD1_k127_5756403_2 Protein of unknown function (DUF2911) - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001408 451.0
DYD1_k127_5756403_3 with different specificities (Related to short-chain alcohol - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007313 325.0
DYD1_k127_5756403_4 SRPBCC domain-containing protein - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000005547 249.0
DYD1_k127_5756403_5 PFAM FAD binding domain of DNA photolyase K01669 - 4.1.99.3 0.00000000000000000000000000000000000000000000000000000000000000099 221.0
DYD1_k127_5767264_0 peptidase S41 - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001878 380.0
DYD1_k127_5767264_1 helix_turn_helix, Lux Regulon - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007999 361.0
DYD1_k127_5767264_2 Histidine kinase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006997 343.0
DYD1_k127_5781138_0 Involved in targeting and insertion of nascent membrane proteins into the cytoplasmic membrane. Binds to the hydrophobic signal sequence of the ribosome-nascent chain (RNC) as it emerges from the ribosomes. The SRP-RNC complex is then targeted to the cytoplasmic membrane where it interacts with the SRP receptor FtsY K03106 - 3.6.5.4 2.285e-257 796.0
DYD1_k127_5781138_1 Catalyzes the oxidation of 5,10- methylenetetrahydrofolate to 5,10-methenyltetrahydrofolate and then the hydrolysis of 5,10-methenyltetrahydrofolate to 10- formyltetrahydrofolate K01491 GO:0003674,GO:0003824,GO:0004477,GO:0004488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006730,GO:0008150,GO:0008152,GO:0009987,GO:0016491,GO:0016645,GO:0016646,GO:0016787,GO:0016810,GO:0016814,GO:0019238,GO:0044237,GO:0044281,GO:0044424,GO:0044444,GO:0044464,GO:0055114 1.5.1.5,3.5.4.9 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000154 540.0
DYD1_k127_5781138_2 Predicted membrane protein (DUF2306) - - - 0.00000000000000000000000000001148 119.0
DYD1_k127_5781138_3 S23 ribosomal protein - - - 0.00000000000000000000000001479 110.0
DYD1_k127_5784529_0 COG3279 Response regulator of the LytR AlgR family - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000111 402.0
DYD1_k127_5784529_1 Histidine kinase - - - 0.000000000000000000000000000000000000000000000000000000000000173 214.0
DYD1_k127_5784529_2 Belongs to the sodium solute symporter (SSF) (TC 2.A.21) family K03307 - - 0.000000000000000000000000000000001427 130.0
DYD1_k127_5785030_0 Belongs to the bacterial solute-binding protein 9 family - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001986 398.0
DYD1_k127_5785030_1 - - - - 0.0000000000000000000000000000000000000000000000000000000000000004499 229.0
DYD1_k127_5788760_0 Part of the Sec protein translocase complex. Interacts with the SecYEG preprotein conducting channel. SecDF uses the proton motive force (PMF) to complete protein translocation after the ATP-dependent function of SecA K03072,K12257 - - 0.0 1549.0
DYD1_k127_5796903_0 Two component regulator three Y - - - 1.006e-309 958.0
DYD1_k127_5796903_1 - - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003374 568.0
DYD1_k127_5796903_2 PAP2 superfamily - - - 0.0000000000001659 74.0
DYD1_k127_5806529_0 Couples transcription and DNA repair by recognizing RNA polymerase (RNAP) stalled at DNA lesions. Mediates ATP-dependent release of RNAP and its truncated transcript from the DNA, and recruitment of nucleotide excision repair machinery to the damaged site K03723 - - 0.0 1251.0
DYD1_k127_5806529_1 Protein of unknown function (DUF3352) - - - 0.000000000000000000000000003498 111.0
DYD1_k127_5810789_0 acetolactate synthase K01652 - 2.2.1.6 1.081e-210 655.0
DYD1_k127_5810789_1 O-methyltransferase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000289 353.0
DYD1_k127_5810789_2 Acetolactate synthase small K01653 - 2.2.1.6 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009304 326.0
DYD1_k127_5810789_3 Involved in the biosynthesis of branched-chain amino acids (BCAA). Catalyzes an alkyl-migration followed by a ketol- acid reduction of (S)-2-acetolactate (S2AL) to yield (R)-2,3- dihydroxy-isovalerate. In the isomerase reaction, S2AL is rearranged via a Mg-dependent methyl migration to produce 3- hydroxy-3-methyl-2-ketobutyrate (HMKB). In the reductase reaction, this 2-ketoacid undergoes a metal-dependent reduction by NADPH to yield (R)-2,3-dihydroxy-isovalerate K00053 - 1.1.1.86 0.0000000000000000000000000000000000000000000000000000000000000000000000843 240.0
DYD1_k127_5819073_0 ATP-dependent serine protease that mediates the selective degradation of mutant and abnormal proteins as well as certain short-lived regulatory proteins. Required for cellular homeostasis and for survival from DNA damage and developmental changes induced by stress. Degrades polypeptides processively to yield small peptide fragments that are 5 to 10 amino acids long. Binds to DNA in a double-stranded, site-specific manner K01338 - 3.4.21.53 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002816 438.0
DYD1_k127_5819073_1 Belongs to the cytidylate kinase family. Type 1 subfamily K00945 GO:0003674,GO:0003824,GO:0004127,GO:0004592,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006082,GO:0006139,GO:0006520,GO:0006573,GO:0006575,GO:0006725,GO:0006732,GO:0006753,GO:0006766,GO:0006767,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009081,GO:0009108,GO:0009110,GO:0009117,GO:0009123,GO:0009165,GO:0009987,GO:0015939,GO:0015940,GO:0016053,GO:0016301,GO:0016310,GO:0016740,GO:0016772,GO:0016776,GO:0016874,GO:0016879,GO:0016881,GO:0018130,GO:0019205,GO:0019438,GO:0019637,GO:0019752,GO:0032787,GO:0033317,GO:0034641,GO:0034654,GO:0042364,GO:0042398,GO:0043436,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0044283,GO:0044424,GO:0044444,GO:0044464,GO:0046394,GO:0046483,GO:0046939,GO:0046940,GO:0050145,GO:0051186,GO:0051188,GO:0055086,GO:0071704,GO:0072330,GO:0090407,GO:1901293,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576,GO:1901605 2.7.4.25 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001166 361.0
DYD1_k127_5819073_2 SnoaL-like domain - - - 0.0000000000000000000000000000000000000281 149.0
DYD1_k127_5819073_3 PFAM Activator of Hsp90 ATPase homolog 1-like protein - - - 0.000000001411 58.0
DYD1_k127_5833780_0 COGs COG3263 NhaP-type Na H and K H antiporter with a unique C-terminal domain K11105 - - 1.228e-279 864.0
DYD1_k127_5833780_1 AhpC/TSA family - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008248 486.0
DYD1_k127_5833780_2 membrane transporter protein K07090 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002217 437.0
DYD1_k127_5833780_3 TIGRFAM export-related chaperone CsaA K06878 - - 0.0000000000000000000000000000000000000000000000000003374 186.0
DYD1_k127_5833780_4 DoxX-like family - - - 0.00000000000000000000000000000000000000000000000006266 181.0
DYD1_k127_5833780_5 WD40-like Beta Propeller Repeat - - - 0.00000000000000000000000000002971 118.0
DYD1_k127_5833780_6 - - - - 0.0000000815 54.0
DYD1_k127_5850777_0 PAP2 superfamily - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000359 511.0
DYD1_k127_5850777_1 Peptidase m28 - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000005515 283.0
DYD1_k127_5850777_2 including yeast histone deacetylase and acetoin utilization protein - - - 0.00000000000000000000000000000000000002191 143.0
DYD1_k127_5852784_0 Protein of unknown function (DUF3109) - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004605 369.0
DYD1_k127_5852784_1 PFAM Signal transduction histidine kinase, internal region - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002825 349.0
DYD1_k127_5852784_2 UPF0056 membrane protein K05595 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003067 333.0
DYD1_k127_5852784_3 Belongs to the peptidase S41A family K03797 - 3.4.21.102 0.0000000000000000000000000000000000000000000000000000000000000000000000000000005501 265.0
DYD1_k127_5852784_4 - - - - 0.0000000000000000000000001469 106.0
DYD1_k127_585374_0 Pfam Biopterin-dependent aromatic amino acid hydroxylase K00500 - 1.14.16.1 9.794e-291 895.0
DYD1_k127_585374_1 Peptidase family M1 domain - - - 0.0000000000000000000000000000000000000000000001181 174.0
DYD1_k127_5856316_0 membrane - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007689 595.0
DYD1_k127_5856316_1 membrane protein domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005513 432.0
DYD1_k127_5856316_2 membrane - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001579 362.0
DYD1_k127_5856316_3 - - - - 0.00000000000000000000000000000000000000000000000000000000000003738 216.0
DYD1_k127_5856316_4 Required for formation of the rod structure in the basal body of the flagellar apparatus. Together with FliI and FliH, may constitute the export apparatus of flagellin - - - 0.0000000000000000000000000000000000000000000000000000000004165 208.0
DYD1_k127_5870272_0 mannose-1-phosphate guanylyltransferase K00971 - 2.7.7.13 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000258 488.0
DYD1_k127_5870272_1 protein conserved in bacteria - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008786 381.0
DYD1_k127_5870272_2 Belongs to the short-chain dehydrogenases reductases (SDR) family - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001345 302.0
DYD1_k127_5870272_3 Belongs to the short-chain dehydrogenases reductases (SDR) family - - - 0.00000000000000002725 81.0
DYD1_k127_5878006_0 Oxidoreductase family, NAD-binding Rossmann fold - - - 2.623e-282 874.0
DYD1_k127_5878006_1 Belongs to the sodium solute symporter (SSF) (TC 2.A.21) family - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001984 398.0
DYD1_k127_5878006_2 2-keto-4-pentenoate hydratase 2-oxohepta-3-ene-1,7-dioic acid hydratase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002102 387.0
DYD1_k127_5878006_3 Domain of Unknown Function (DUF1080) - - - 0.0000000000000000000000000000000000000000005472 156.0
DYD1_k127_5880282_0 Pyridine nucleotide-disulphide oxidoreductase K17218 - 1.8.5.4 1.241e-255 790.0
DYD1_k127_5880282_1 cytochrome bd ubiquinol oxidase, subunit I K00425 - 1.10.3.14 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007546 596.0
DYD1_k127_5880282_2 cytochrome d ubiquinol oxidase, subunit II K00426 - 1.10.3.14 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004266 571.0
DYD1_k127_5883589_0 COG1228 Imidazolonepropionase and related - - - 1.136e-208 654.0
DYD1_k127_5883589_1 Prolyl oligopeptidase, N-terminal beta-propeller domain - - - 0.0000000000000000000000000002939 115.0
DYD1_k127_5914796_0 FAD dependent oxidoreductase TIGR03364 - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005292 366.0
DYD1_k127_5914796_1 TIGRFAM haloacid dehalogenase superfamily, subfamily IA, variant 1 with third motif having Dx(3-4)D or Dx(3-4)E - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003276 362.0
DYD1_k127_5914796_2 DNA-binding protein - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002881 343.0
DYD1_k127_5914796_3 TonB-dependent receptor plug - - - 0.000000000003024 66.0
DYD1_k127_5922074_0 TonB-dependent receptor plug - - - 0.0 1470.0
DYD1_k127_5922074_1 SusD family K21572 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008639 565.0
DYD1_k127_5922074_2 protein import - - - 0.000000000000000000000000002492 120.0
DYD1_k127_5922074_3 Helix-turn-helix XRE-family like proteins - - - 0.00000000000006769 73.0
DYD1_k127_5927195_0 GTP cyclohydrolase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003944 527.0
DYD1_k127_5927195_1 Leucine-rich repeat (LRR) protein - - - 0.000000000000000000000000000005237 128.0
DYD1_k127_5927195_2 Leucine-rich repeats, typical (most populated) subfamily - - - 0.00000000000000000006866 98.0
DYD1_k127_5933176_0 Interacts with outer membrane receptor proteins that carry out high-affinity binding and energy dependent uptake into the periplasmic space of specific substrates. It could act to transduce energy from the cytoplasmic membrane to specific energy- requiring processes in the outer membrane, resulting in the release into the periplasm of ligands bound by these outer membrane proteins - - - 1.215e-230 719.0
DYD1_k127_5933176_1 OmpA family - - - 2.075e-208 662.0
DYD1_k127_5933176_2 - - - - 0.0000000000000000000000000000000000000000000002634 170.0
DYD1_k127_5972625_0 oligopeptidase that cleaves peptide bonds following arginine and lysine residues K01354 - 3.4.21.83 1.002e-250 777.0
DYD1_k127_5981061_0 Belongs to the heme-copper respiratory oxidase family K15862 - 1.9.3.1 0.0 1443.0
DYD1_k127_5981061_1 cation transport ATPase K01533,K17686 - 3.6.3.4,3.6.3.54 0.0 1367.0
DYD1_k127_5981061_2 cytochrome C oxidase - - - 1.963e-272 842.0
DYD1_k127_5981061_3 Universal stress protein - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005093 527.0
DYD1_k127_5981061_4 cytochrome C K00406 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007817 514.0
DYD1_k127_5981061_5 CRP FNR family transcriptional regulator K01420 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001106 417.0
DYD1_k127_5981061_6 Catalyzes the anaerobic formation of alpha-ketobutyrate and ammonia from threonine in a two-step reaction. The first step involved a dehydration of threonine and a production of enamine intermediates (aminocrotonate), which tautomerizes to its imine form (iminobutyrate). Both intermediates are unstable and short- lived. The second step is the nonenzymatic hydrolysis of the enamine imine intermediates to form 2-ketobutyrate and free ammonia. In the low water environment of the cell, the second step is accelerated by RidA K01754 - 4.3.1.19 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009319 354.0
DYD1_k127_5981061_7 PFAM Cbb3-type cytochrome oxidase component FixQ - - - 0.00000000000000000000000000000147 121.0
DYD1_k127_5981061_8 Cytochrome oxidase maturation protein - - - 0.00000000000000001406 84.0
DYD1_k127_5994389_0 Pfam Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase - - - 8.519e-234 732.0
DYD1_k127_5994389_1 transcriptional regulator - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003837 311.0
DYD1_k127_5994389_2 molecular chaperone K03686,K05516 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000393 243.0
DYD1_k127_5994389_3 Universal stress protein - - - 0.00000000000000000000000000000000000000000000000000000000000000000003761 235.0
DYD1_k127_5994389_4 - - - - 0.0000000000000000000000000000000000000000000000000000000000000000151 225.0
DYD1_k127_6000508_0 Catalyzes the conversion of L-arabinose to L-ribulose K01804 - 5.3.1.4 1.874e-297 915.0
DYD1_k127_6000508_1 Converts alpha-aldose to the beta-anomer K01785 - 5.1.3.3 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008056 302.0
DYD1_k127_6024088_0 Protein of unknown function (DUF3822) - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002577 441.0
DYD1_k127_6024088_1 COG0507 ATP-dependent exoDNAse (exonuclease V) alpha subunit - helicase superfamily I member K01144 - 3.1.11.5 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003485 411.0
DYD1_k127_6024088_2 DNA polymerase III is a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria. This DNA polymerase also exhibits 3' to 5' exonuclease activity K02343 - 2.7.7.7 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005151 371.0
DYD1_k127_6024088_3 Methyltransferase K08316 - 2.1.1.171 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000009963 294.0
DYD1_k127_6024088_4 - - - - 0.0000000000000000000000000000000000000000000000000000000003342 210.0
DYD1_k127_6025814_0 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain - - - 1.171e-227 706.0
DYD1_k127_6025814_1 Aldolase/RraA - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009346 550.0
DYD1_k127_6034415_0 Trk-type K transport systems, membrane components K03498 - - 4.357e-248 769.0
DYD1_k127_6034415_1 K transport systems, NAD-binding component K03499 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004821 508.0
DYD1_k127_6041788_0 Glycosyl transferase family 2 - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000772 590.0
DYD1_k127_6041788_1 YbbR-like protein - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001164 449.0
DYD1_k127_6041788_2 Catalyzes the phosphorylation of the 3'-hydroxyl group of dephosphocoenzyme A to form coenzyme A K00859 GO:0003674,GO:0003824,GO:0004140,GO:0006139,GO:0006163,GO:0006164,GO:0006725,GO:0006732,GO:0006753,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009108,GO:0009117,GO:0009150,GO:0009152,GO:0009165,GO:0009259,GO:0009260,GO:0009987,GO:0015936,GO:0015937,GO:0016301,GO:0016310,GO:0016740,GO:0016772,GO:0016773,GO:0018130,GO:0019438,GO:0019637,GO:0019693,GO:0033865,GO:0033866,GO:0033875,GO:0034030,GO:0034032,GO:0034033,GO:0034641,GO:0034654,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0046390,GO:0046483,GO:0051186,GO:0051188,GO:0055086,GO:0071704,GO:0072521,GO:0072522,GO:0090407,GO:1901135,GO:1901137,GO:1901293,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576 2.7.1.24 0.00000000000000000000000000000000000000000000000000000000000000000000000000000003213 272.0
DYD1_k127_6041788_3 Histidine kinase K07636 - 2.7.13.3 0.0000000000000000000000000000002695 124.0
DYD1_k127_604890_0 MacB-like periplasmic core domain K02004 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001358 493.0
DYD1_k127_604890_1 MacB-like periplasmic core domain K02004 - - 0.000000000000000000000000000000000000000000000000000000000000000009472 227.0
DYD1_k127_6053157_0 Tetratricopeptide repeat protein - - - 2.546e-243 755.0
DYD1_k127_6053157_1 CBS domain K03699 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008658 455.0
DYD1_k127_6053157_2 Lipopolysaccharide-assembly, LptC-related - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002513 365.0
DYD1_k127_6053157_3 - - - - 0.0000000000000000000000000006703 113.0
DYD1_k127_6053157_4 Bacterial protein of unknown function (DUF885) - - - 0.0000003824 52.0
DYD1_k127_6058743_0 methyltransferase - - - 1.552e-232 725.0
DYD1_k127_6058743_1 acetyltransferase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000173 394.0
DYD1_k127_6058743_2 glycosyl transferase family 2 K00786 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005334 335.0
DYD1_k127_6058743_3 argininosuccinate synthase K01940 - 6.3.4.5 0.00000000000000005157 80.0
DYD1_k127_6072564_0 ATPase involved in DNA repair - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002203 432.0
DYD1_k127_6072564_1 Catalyzes the attachment of glutamate to tRNA(Glu) in a two-step reaction glutamate is first activated by ATP to form Glu-AMP and then transferred to the acceptor end of tRNA(Glu) K01885 - 6.1.1.17 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001116 364.0
DYD1_k127_6073392_0 Catalyzes the condensation of (S)-aspartate-beta- semialdehyde (S)-ASA and pyruvate to 4-hydroxy- tetrahydrodipicolinate (HTPA) K01714 - 4.3.3.7 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001076 468.0
DYD1_k127_6073392_1 Outer membrane assembly lipoprotein YfiO K05807 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000904 456.0
DYD1_k127_6073392_2 Catalyzes two steps in the biosynthesis of coenzyme A. In the first step cysteine is conjugated to 4'-phosphopantothenate to form 4-phosphopantothenoylcysteine, in the latter compound is decarboxylated to form 4'-phosphopantotheine K13038 - 4.1.1.36,6.3.2.5 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003133 327.0
DYD1_k127_6073392_3 - - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001114 323.0
DYD1_k127_6073392_4 Promotes RNA polymerase assembly. Latches the N- and C- terminal regions of the beta' subunit thereby facilitating its interaction with the beta and alpha subunits - - - 0.0000000000000000000000000000000000000000000000000000000005969 202.0
DYD1_k127_6073392_5 5'-nucleotidase K01081 - 3.1.3.5 0.000000000000000000000002822 106.0
DYD1_k127_6078242_0 BNR Asp-box repeat - - - 0.0 1150.0
DYD1_k127_6078242_1 PFAM Uncharacterised protein family (UPF0093) K08973 - - 0.00000000000000000000000000000000000000006092 151.0
DYD1_k127_6082000_0 Belongs to the BshC family K22136 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002296 386.0
DYD1_k127_6082000_1 beta-phosphoglucomutase K01838 - 5.4.2.6 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007534 375.0
DYD1_k127_6088946_0 TonB dependent receptor - - - 0.0 1067.0
DYD1_k127_6088946_1 SusD family K21572 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000005113 289.0
DYD1_k127_6097680_0 Peptidase family M1 domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004496 370.0
DYD1_k127_6097680_1 Protein of unknown function (DUF4230) - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000175 330.0
DYD1_k127_6097680_2 Gscfa family - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000009769 274.0
DYD1_k127_6100378_0 Involved in the restart of stalled replication forks. Recognizes and binds the arrested nascent DNA chain at stalled replication forks. It can open the DNA duplex, via its helicase activity, and promote assembly of the primosome and loading of the major replicative helicase DnaB onto DNA K04066 - - 0.0 1439.0
DYD1_k127_6100378_1 ribonuclease BN K07058 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003063 552.0
DYD1_k127_6100378_2 Response regulator of the LytR AlgR family - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001676 447.0
DYD1_k127_6100378_3 Binds to the 23S rRNA K02939 GO:0003674,GO:0003676,GO:0003723,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0006412,GO:0006518,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0015934,GO:0019538,GO:0022625,GO:0022626,GO:0032991,GO:0034641,GO:0034645,GO:0043043,GO:0043170,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:0071704,GO:0097159,GO:1901363,GO:1901564,GO:1901566,GO:1901576,GO:1990904 - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000005823 276.0
DYD1_k127_6100378_4 Binds together with S18 to 16S ribosomal RNA K02990 GO:0003674,GO:0003676,GO:0003723,GO:0003735,GO:0005198,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0015935,GO:0019843,GO:0022626,GO:0022627,GO:0032991,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:0070181,GO:0097159,GO:1901363,GO:1990904 - 0.000000000000000000000000000000000000000000000000000000000000000002875 228.0
DYD1_k127_6100378_5 Binds as a heterodimer with protein S6 to the central domain of the 16S rRNA, where it helps stabilize the platform of the 30S subunit K02963 GO:0003674,GO:0003735,GO:0005198,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0006412,GO:0006518,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0015935,GO:0019538,GO:0022626,GO:0022627,GO:0032991,GO:0034641,GO:0034645,GO:0043043,GO:0043170,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:0071704,GO:1901564,GO:1901566,GO:1901576,GO:1990904 - 0.0000000000000000000000000000000000000000000000000000007984 192.0
DYD1_k127_6100378_6 Uncharacterized protein conserved in bacteria (DUF2147) - - - 0.00000000000000000000000000000000000000000000000000005062 190.0
DYD1_k127_6112220_0 Domain of unknown function DUF11 - - - 0.0 1399.0
DYD1_k127_6112220_1 7TM diverse intracellular signalling - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001685 588.0
DYD1_k127_6112220_2 membrane - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003552 508.0
DYD1_k127_6112220_3 LytTr DNA-binding domain K02477 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003222 427.0
DYD1_k127_6112220_4 COG1648 Siroheme synthase (precorrin-2 oxidase ferrochelatase domain) K02304,K07090 - 1.3.1.76,4.99.1.4 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002921 346.0
DYD1_k127_6122353_0 ABC-type transport system involved in lipoprotein release permease component K09808 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002262 501.0
DYD1_k127_6122353_1 Part of the ABC transporter complex LolCDE involved in the translocation of K09810 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000154 387.0
DYD1_k127_6122353_2 Catalyzes the hydrolysis of ATP coupled with the transport of calcium - GO:0003674,GO:0003824,GO:0004035,GO:0004346,GO:0005488,GO:0005575,GO:0005623,GO:0006793,GO:0006796,GO:0008150,GO:0008152,GO:0008270,GO:0008877,GO:0009987,GO:0016311,GO:0016787,GO:0016788,GO:0016791,GO:0019203,GO:0042578,GO:0042597,GO:0043167,GO:0043169,GO:0044237,GO:0044464,GO:0046872,GO:0046914,GO:0050308,GO:0050309,GO:0098519 - 0.000000000000000000000001206 106.0
DYD1_k127_6122353_3 type I phosphodiesterase nucleotide pyrophosphatase - - - 0.0000000108 56.0
DYD1_k127_612485_0 Outer membrane receptor - - - 0.0 1556.0
DYD1_k127_612485_1 SusD family - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005015 370.0
DYD1_k127_612485_2 helix_turn_helix, arabinose operon control protein - - - 0.000000000000000000000000000000000000003335 148.0
DYD1_k127_6128693_0 Psort location CytoplasmicMembrane, score - - - 1.513e-234 732.0
DYD1_k127_6128693_1 protein (some members contain a von Willebrand factor type A (vWA) domain) - - - 0.0000000000000000000000000000000000000000000000000000000000000000005614 228.0
DYD1_k127_6130418_0 Carbohydrate kinase K00854 - 2.7.1.17 1.591e-268 831.0
DYD1_k127_6130418_1 lacI family K02529 - - 5.068e-203 634.0
DYD1_k127_6130418_2 Catalyzes the interconversion of D-xylose to D-xylulose K01805 - 5.3.1.5 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004002 602.0
DYD1_k127_6130418_3 Glucuronate isomerase K01812 - 5.3.1.12 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008676 391.0
DYD1_k127_6137636_0 Belongs to the aldehyde dehydrogenase family K00128,K00138 - 1.2.1.3 5.006e-311 955.0
DYD1_k127_6137636_1 ABC-type molybdenum transport system ATPase component photorepair protein PhrA K05776 - - 5.949e-198 624.0
DYD1_k127_6137636_2 Transfers the N-acyl diglyceride group on what will become the N-terminal cysteine of membrane lipoproteins - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004086 590.0
DYD1_k127_6137636_3 COGs COG1670 Acetyltransferase including N-acetylase of ribosomal protein - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003276 311.0
DYD1_k127_6137636_4 Part of the Sec protein translocase complex. Interacts with the SecYEG preprotein conducting channel. SecDF uses the proton motive force (PMF) to complete protein translocation after the ATP-dependent function of SecA K03072,K12257 - - 0.0000000000000000000000000000000000000000000000000000000000000009739 219.0
DYD1_k127_6137636_5 acr, cog1430 K09005 - - 0.000000000000000000000000000000000000000000000000000000000000002681 221.0
DYD1_k127_6137636_6 Protein of unknown function (DUF779) K09959 - - 0.000000000000000000000000000000000000000000000000000000000001398 212.0
DYD1_k127_6137636_7 AraC-type transcriptional regulator N-terminus - - - 0.0000000000000000000000000000000000000000005559 158.0
DYD1_k127_6137636_8 Could be involved in insertion of integral membrane proteins into the membrane K08998 - - 0.00000000000000002709 80.0
DYD1_k127_6137636_9 Could be involved in insertion of integral membrane proteins into the membrane K08998 - - 0.0000000000004144 71.0
DYD1_k127_6140420_0 hydrolase, family 65, central catalytic K00691 - 2.4.1.8 4.375e-240 745.0
DYD1_k127_6140420_1 transcriptional regulator K02529,K05499 - - 0.000000000000000000000000000000000000000000000000000001303 194.0
DYD1_k127_6140420_2 COG0457 FOG TPR repeat - - - 0.000003394 49.0
DYD1_k127_6141620_0 DNA polymerase III K02342 - 2.7.7.7 1.285e-212 667.0
DYD1_k127_6141620_1 Ion transporter K10716 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003763 486.0
DYD1_k127_6141620_2 Catalyzes the transfer of a dimethylallyl group onto the adenine at position 37 in tRNAs that read codons beginning with uridine, leading to the formation of N6-(dimethylallyl)adenosine (i(6)A) K00791 GO:0003674,GO:0003824,GO:0006139,GO:0006396,GO:0006399,GO:0006400,GO:0006725,GO:0006807,GO:0008033,GO:0008150,GO:0008152,GO:0009451,GO:0009987,GO:0010467,GO:0016070,GO:0016740,GO:0016765,GO:0034470,GO:0034641,GO:0034660,GO:0043170,GO:0043412,GO:0044237,GO:0044238,GO:0046483,GO:0052381,GO:0071704,GO:0090304,GO:0140098,GO:0140101,GO:1901360 2.5.1.75 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001158 478.0
DYD1_k127_6141620_3 PFAM Uncharacterised conserved protein UCP033563 - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007405 450.0
DYD1_k127_6141620_4 Pyridoxal 5'-phosphate (PLP)-binding protein, which is involved in PLP homeostasis K06997 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002966 362.0
DYD1_k127_6141620_5 Catalyzes the transfer of a dimethylallyl group onto the adenine at position 37 in tRNAs that read codons beginning with uridine, leading to the formation of N6-(dimethylallyl)adenosine (i(6)A) K00791 GO:0003674,GO:0003824,GO:0006139,GO:0006396,GO:0006399,GO:0006400,GO:0006725,GO:0006807,GO:0008033,GO:0008150,GO:0008152,GO:0009451,GO:0009987,GO:0010467,GO:0016070,GO:0016740,GO:0016765,GO:0034470,GO:0034641,GO:0034660,GO:0043170,GO:0043412,GO:0044237,GO:0044238,GO:0046483,GO:0052381,GO:0071704,GO:0090304,GO:0140098,GO:0140101,GO:1901360 2.5.1.75 0.000000000000000000000000000000001264 131.0
DYD1_k127_6160102_0 Major Facilitator K08218 - - 8.26e-259 801.0
DYD1_k127_6160102_1 Glycosyl hydrolase family 3 N terminal domain - - - 5.336e-224 706.0
DYD1_k127_6160102_2 Methyltransferase domain - - - 0.0000000000000000000000000000001495 126.0
DYD1_k127_6160102_3 Acetyltransferase (GNAT) family - - - 0.00000007674 53.0
DYD1_k127_619007_0 TonB-dependent receptor - - - 0.0 1369.0
DYD1_k127_619007_1 Involved in the TCA cycle. Catalyzes the stereospecific interconversion of fumarate to L-malate K01679 - 4.2.1.2 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005876 387.0
DYD1_k127_619007_2 - - - - 0.0000000000000000000000002149 107.0
DYD1_k127_6205707_0 Major Facilitator Superfamily - - - 6.159e-237 736.0
DYD1_k127_6205707_1 LmbE homologs - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001657 561.0
DYD1_k127_6205707_2 ROK family K00845 - 2.7.1.2 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000137 425.0
DYD1_k127_6205707_3 Beta-L-arabinofuranosidase, GH127 - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002547 367.0
DYD1_k127_6224782_0 CBS domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000002771 233.0
DYD1_k127_6224782_1 Domain of Unknown Function (DUF349) - - - 0.000000000000000000000000000000001299 130.0
DYD1_k127_6224782_2 serine threonine protein kinase K02218 - 2.7.11.1 0.00000000001045 76.0
DYD1_k127_6228228_0 Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family K03585 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004076 554.0
DYD1_k127_6228228_1 Universal stress protein UspA and related nucleotide-binding - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002543 452.0
DYD1_k127_6228228_2 Universal stress protein family - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007214 387.0
DYD1_k127_6228228_3 Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family K03296,K18138 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003537 328.0
DYD1_k127_6242206_0 PFAM Signal transduction histidine kinase, internal region - - - 5.091e-267 829.0
DYD1_k127_6242206_1 COG3279 Response regulator of the LytR AlgR family K02477 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001649 471.0
DYD1_k127_6268086_0 Type IV secretory pathway - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004888 411.0
DYD1_k127_6269621_0 An essential GTPase that binds both GDP and GTP, with rapid nucleotide exchange. Plays a role in 16S rRNA processing and 30S ribosomal subunit biogenesis and possibly also in cell cycle regulation and energy metabolism K03595 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001828 557.0
DYD1_k127_6269621_1 - - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000001528 262.0
DYD1_k127_6269621_2 amino acid carrier protein K03310 - - 0.000000000000000000000000000000000000000000000000000000000000000001548 229.0
DYD1_k127_6269621_3 GTPase that plays an essential role in the late steps of ribosome biogenesis K03977 - - 0.000000000000000000000000000000000000000000000000001609 183.0
DYD1_k127_6283012_0 D-alanyl-D-alanine carboxypeptidase (penicillin-binding protein 4) K07259 - 3.4.16.4 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003027 417.0
DYD1_k127_6283012_1 TIGR02453 family - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004424 381.0
DYD1_k127_6283012_2 Peptidase family S41 - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006533 365.0
DYD1_k127_6283012_3 GDP-mannose pyrophosphatase K01515 - 3.6.1.13 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004301 323.0
DYD1_k127_6292145_0 8-amino-7-oxononanoate synthase K00639 - 2.3.1.29 5.911e-267 822.0
DYD1_k127_6292145_1 Cystathionine beta-synthase K01697,K01738 - 2.5.1.47,4.2.1.22 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003327 526.0
DYD1_k127_6292145_2 GTP cyclohydrolase - - - 0.0000000000006381 68.0
DYD1_k127_6297618_0 NADH dehydrogenase K03885 - 1.6.99.3 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000264 591.0
DYD1_k127_6297618_1 N-acetylglucosamine kinase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003075 359.0
DYD1_k127_6297618_2 glucosamine-6-phosphate deaminase K02564 - 3.5.99.6 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000001059 279.0
DYD1_k127_62990_0 Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family K03296 - - 1.187e-280 867.0
DYD1_k127_6311603_0 Belongs to the class-II aminoacyl-tRNA synthetase family K01880 - 6.1.1.14 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004533 379.0
DYD1_k127_6311603_1 SdpI/YhfL protein family - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001167 321.0
DYD1_k127_6311603_2 Putative helix-turn-helix protein, YlxM / p13 like - - - 0.0000000000000000000000000000000000000000002372 158.0
DYD1_k127_6311603_3 Protein of unknown function (DUF1697) - - - 0.0000000004006 61.0
DYD1_k127_6325675_0 Belongs to the glycosyl hydrolase 2 family K05970 - 3.1.1.53 2.095e-320 990.0
DYD1_k127_6325675_1 Belongs to the glycosyl hydrolase 43 family K01198,K01209 - 3.2.1.37,3.2.1.55 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000735 429.0
DYD1_k127_6325675_2 Glycosyl hydrolase family 115 - - - 0.000000001594 59.0
DYD1_k127_6342957_0 Histidine ammonia-lyase K01745 - 4.3.1.3 2.794e-315 968.0
DYD1_k127_6342957_1 Catalyzes the conversion of urocanate to 4-imidazolone- 5-propionate K01712 - 4.2.1.49 1.34e-296 912.0
DYD1_k127_6342957_2 Belongs to the metallo-dependent hydrolases superfamily. HutI family K01468 - 3.5.2.7 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004082 419.0
DYD1_k127_6342957_3 transcriptional regulator - - - 0.000003349 51.0
DYD1_k127_6356699_0 COG0577 ABC-type antimicrobial peptide transport system permease component - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006176 606.0
DYD1_k127_6356699_1 COG0577 ABC-type antimicrobial peptide transport system permease component K02004 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002205 471.0
DYD1_k127_6364552_0 Belongs to the GARS family K01945 - 6.3.4.13 1.449e-246 764.0
DYD1_k127_6364552_1 heptosyltransferase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004705 557.0
DYD1_k127_6364552_2 - - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001451 412.0
DYD1_k127_6364552_3 Bacterial regulatory proteins, tetR family - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000443 372.0
DYD1_k127_6364552_4 Protein of unknown function (DUF4254) - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003573 352.0
DYD1_k127_6364552_5 - - - - 0.000000000000000000000000000000000000008136 145.0
DYD1_k127_6364552_6 - - - - 0.000000001322 63.0
DYD1_k127_6367749_0 NAD-dependent epimerase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006372 583.0
DYD1_k127_6367749_1 Peptidase m28 - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001037 504.0
DYD1_k127_6367749_2 Tetratricopeptide repeat - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000408 402.0
DYD1_k127_6367749_3 COG0451 Nucleoside-diphosphate-sugar - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008039 317.0
DYD1_k127_6367749_4 SnoaL-like domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000006801 274.0
DYD1_k127_6367749_5 Molybdenum cofactor biosynthesis K03637 - 4.6.1.17 0.00000000000000000000000000000000000000000000000000000000000000000000000000001313 260.0
DYD1_k127_6367749_6 Molybdopterin converting factor K03635 - 2.8.1.12 0.00000000000000000000000000000000000000000000000000000000000000000000001923 244.0
DYD1_k127_6367749_7 - - - - 0.00000000000000000000000000000000000000000000007405 171.0
DYD1_k127_6368972_0 PFAM alpha beta hydrolase fold - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008287 412.0
DYD1_k127_6368972_1 Catalyzes hydrolysis of the D-alanyl-D-alanine dipeptide K08641 - 3.4.13.22 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004101 390.0
DYD1_k127_6375984_0 Catalyzes the reversible conversion of 3- phosphohydroxypyruvate to phosphoserine and of 3-hydroxy-2-oxo-4- phosphonooxybutanoate to phosphohydroxythreonine K00831 GO:0003674,GO:0003824,GO:0004648,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006082,GO:0006520,GO:0006563,GO:0006564,GO:0006807,GO:0008150,GO:0008152,GO:0008483,GO:0008652,GO:0009058,GO:0009069,GO:0009070,GO:0009987,GO:0016053,GO:0016740,GO:0016769,GO:0019752,GO:0043436,GO:0044237,GO:0044238,GO:0044249,GO:0044281,GO:0044283,GO:0044424,GO:0044464,GO:0046394,GO:0071704,GO:1901564,GO:1901566,GO:1901576,GO:1901605,GO:1901607 2.6.1.52 2.685e-214 667.0
DYD1_k127_6375984_1 Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family K00058 - 1.1.1.399,1.1.1.95 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002932 503.0
DYD1_k127_6375984_2 PFAM Bacterial protein of - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009738 372.0
DYD1_k127_6375984_3 23S rRNA-intervening sequence protein - - - 0.00000000000000000000000000000000000001493 146.0
DYD1_k127_6375984_4 acyl-CoA reductase - - - 0.0000000000000000000000001369 107.0
DYD1_k127_6387245_0 protease with the C-terminal PDZ domain - - - 0.0 1002.0
DYD1_k127_6387245_1 8-amino-7-oxononanoate synthase K00639,K00652 - 2.3.1.29,2.3.1.47 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002674 531.0
DYD1_k127_6387245_2 Produces ATP from ADP in the presence of a proton gradient across the membrane. The catalytic sites are hosted primarily by the beta subunits K02112 - 3.6.3.14 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002739 404.0
DYD1_k127_6387245_3 Acetyltransferase (GNAT) family - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000006629 278.0
DYD1_k127_6387245_4 Putative prokaryotic signal transducing protein - - - 0.00000000000000000000000000000000000000000000000000000000000000000000001936 244.0
DYD1_k127_6387245_5 COG0355 F0F1-type ATP synthase epsilon subunit (mitochondrial delta subunit) K02114 - - 0.00000000000000000000000000000000000000000000009611 169.0
DYD1_k127_6396180_0 Glycosyl hydrolases family 43 - - - 0.0 1253.0
DYD1_k127_6396180_1 Nudix hydrolase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002375 378.0
DYD1_k127_6396180_2 - - - - 0.000000000000000000000000000003235 121.0
DYD1_k127_6404438_0 glycerol acyltransferase - - - 0.0 1146.0
DYD1_k127_6404438_1 Belongs to the aspartokinase family K00928 - 2.7.2.4 0.0000000000000000000000000000000000000000000000000000000000000004385 220.0
DYD1_k127_6404438_2 Acetyltransferase (GNAT) domain K03823 - 2.3.1.183 0.00000000000000000000000000000000006755 133.0
DYD1_k127_6417972_0 Mandelate racemase muconate lactonizing enzyme K01776,K19802 GO:0000287,GO:0003674,GO:0003824,GO:0005488,GO:0006518,GO:0006807,GO:0008150,GO:0008152,GO:0009987,GO:0016853,GO:0016854,GO:0034641,GO:0043167,GO:0043169,GO:0043603,GO:0044237,GO:0046872,GO:0071704,GO:1901564 5.1.1.20,5.1.1.3 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001337 595.0
DYD1_k127_6417972_1 Putative auto-transporter adhesin, head GIN domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000939 365.0
DYD1_k127_6417972_2 aminotransferase class I and II - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005917 307.0
DYD1_k127_6423692_0 Imidazolonepropionase and related - - - 7e-323 991.0
DYD1_k127_6423692_1 COG2939 Carboxypeptidase C (cathepsin A) - - - 2.76e-265 821.0
DYD1_k127_6423692_2 Proline dehydrogenase K00318 - - 0.000000000000000000000000000000000000000000000000000000000000002563 220.0
DYD1_k127_6423692_3 Serine carboxypeptidase - - - 0.000000000000000000000000009655 109.0
DYD1_k127_6423692_4 COG2939 Carboxypeptidase C (cathepsin A) - - - 0.00001448 49.0
DYD1_k127_6427637_0 DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates K03046 GO:0000428,GO:0005575,GO:0005622,GO:0005623,GO:0030880,GO:0032991,GO:0044424,GO:0044464,GO:0061695,GO:1902494,GO:1990234 2.7.7.6 0.0 2025.0
DYD1_k127_6427637_1 Increases the formation of ribosomal termination complexes and stimulates activities of RF-1 and RF-2. It binds guanine nucleotides and has strong preference for UGA stop codons. It may interact directly with the ribosome. The stimulation of RF- 1 and RF-2 is significantly reduced by GTP and GDP, but not by GMP K02837 - - 0.0 1039.0
DYD1_k127_6427637_2 C-terminal domain of CHU protein family - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001631 364.0
DYD1_k127_6427637_3 Protein of unknown function (DUF3467) - - - 0.00000000000000000000000000000000000000000000000000001043 190.0
DYD1_k127_6429546_0 TonB-dependent receptor - - - 0.0 1442.0
DYD1_k127_6429546_1 Aminoacyl peptidase - - - 0.0 1287.0
DYD1_k127_6429546_2 Catalyzes the condensation reaction of fatty acid synthesis by the addition to an acyl acceptor of two carbons from malonyl-ACP. Catalyzes the first condensation reaction which initiates fatty acid synthesis and may therefore play a role in governing the total rate of fatty acid production. Possesses both acetoacetyl-ACP synthase and acetyl transacylase activities. Its substrate specificity determines the biosynthesis of branched- chain and or straight-chain of fatty acids K00648 - 2.3.1.180 6.644e-212 659.0
DYD1_k127_6429546_3 CoA-binding protein K06929 - - 0.000000000000000000000000000000000000000000000000000000000005588 208.0
DYD1_k127_6429546_4 Molecular chaperone K04079 - - 0.000000000000000000000000000000000000000000000000000001177 192.0
DYD1_k127_6429546_5 Belongs to the sodium solute symporter (SSF) (TC 2.A.21) family - - - 0.0000000000000000000000000000000000000000000000001282 178.0
DYD1_k127_6452764_0 Domain of unknown function (DUF4301) - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000008563 284.0
DYD1_k127_6452764_1 - - - - 0.0000000000000000000000000000000000000002919 151.0
DYD1_k127_6458547_0 Required for the insertion and or proper folding and or complex formation of integral membrane proteins into the membrane. Involved in integration of membrane proteins that insert both dependently and independently of the Sec translocase complex, as well as at least some lipoproteins. Aids folding of multispanning membrane proteins K03217 - - 0.0 1092.0
DYD1_k127_6458547_1 Catalyzes the ATP-dependent amination of UTP to CTP with either L-glutamine or ammonia as the source of nitrogen. Regulates intracellular CTP levels through interactions with the four ribonucleotide triphosphates K01937 - 6.3.4.2 0.0 1053.0
DYD1_k127_6472284_0 Peptidase family M1 domain - - - 3.939e-259 815.0
DYD1_k127_6487049_0 Belongs to the ATCase OTCase family K00609 GO:0003674,GO:0003824,GO:0004070,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006139,GO:0006220,GO:0006221,GO:0006725,GO:0006753,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009117,GO:0009165,GO:0009218,GO:0009220,GO:0009259,GO:0009260,GO:0009987,GO:0016740,GO:0016741,GO:0016743,GO:0018130,GO:0019438,GO:0019637,GO:0019693,GO:0034641,GO:0034654,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0044424,GO:0044464,GO:0046390,GO:0046483,GO:0055086,GO:0071704,GO:0072527,GO:0072528,GO:0090407,GO:1901135,GO:1901137,GO:1901293,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576 2.1.3.2 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002669 595.0
DYD1_k127_6487049_1 Zinc phosphodiesterase, which displays some tRNA 3'- processing endonuclease activity. Probably involved in tRNA maturation, by removing a 3'-trailer from precursor tRNA K00784 GO:0003674,GO:0003824,GO:0004518,GO:0004519,GO:0004521,GO:0004540,GO:0006139,GO:0006396,GO:0006399,GO:0006725,GO:0006807,GO:0008033,GO:0008150,GO:0008152,GO:0009987,GO:0010467,GO:0016070,GO:0016787,GO:0016788,GO:0016891,GO:0016893,GO:0031123,GO:0034414,GO:0034470,GO:0034641,GO:0034660,GO:0042779,GO:0042780,GO:0042781,GO:0043170,GO:0043628,GO:0044237,GO:0044238,GO:0046483,GO:0071704,GO:0090304,GO:0090305,GO:0090501,GO:0090502,GO:0140098,GO:1901360,GO:1905267 3.1.26.11 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004325 471.0
DYD1_k127_6487049_2 - - - - 0.00000000000000000000000000000000000000000000000000001433 192.0
DYD1_k127_6487049_3 pyrimidine operon attenuation protein uracil phosphoribosyltransferase K02825 - 2.4.2.9 0.00000000000000000000000000000000000000000000000007711 177.0
DYD1_k127_6496440_0 Belongs to the alpha-IPM synthase homocitrate synthase family K01649 - 2.3.3.13 1.876e-241 749.0
DYD1_k127_6496440_1 Catalyzes the oxidation of 3-carboxy-2-hydroxy-4- methylpentanoate (3-isopropylmalate) to 3-carboxy-4-methyl-2- oxopentanoate. The product decarboxylates to 4-methyl-2 oxopentanoate K00052 - 1.1.1.85 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001625 526.0
DYD1_k127_6496440_2 radical SAM domain protein - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000003814 247.0
DYD1_k127_6506034_0 Sodium:solute symporter family K03307 - - 1.084e-195 627.0
DYD1_k127_6506034_1 7TMR-DISM extracellular 2 K20971 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004656 599.0
DYD1_k127_6520701_0 Catalyzes the reduction of 1-pyrroline-5-carboxylate (PCA) to L-proline K00286 - 1.5.1.2 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007769 493.0
DYD1_k127_6520701_1 Catalyzes the transfer of a phosphate group to glutamate to form L-glutamate 5-phosphate K00931 - 2.7.2.11 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006332 359.0
DYD1_k127_6520701_2 (GNAT) family - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000002063 269.0
DYD1_k127_6520701_3 - - - - 0.000000000000000000000000000002461 122.0
DYD1_k127_6520701_4 Ribosomal protein S21 - - - 0.0000000000000000000000003907 106.0
DYD1_k127_6520701_5 Hydrolase, CocE NonD family protein K06978 - - 0.00000000000002799 73.0
DYD1_k127_6521173_0 PFAM Signal transduction histidine kinase, internal region - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000956 466.0
DYD1_k127_6521173_1 acyltransferase K00655 - 2.3.1.51 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001425 410.0
DYD1_k127_6521173_2 GAF domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002273 319.0
DYD1_k127_6530574_0 Peptidase M16 - - - 2.905e-264 816.0
DYD1_k127_6530574_1 Tetratricopeptide repeat - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006259 417.0
DYD1_k127_6530574_2 This protein binds to 23S rRNA in the presence of protein L20 K02888 GO:0003674,GO:0003735,GO:0005198 - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000001837 291.0
DYD1_k127_6530574_3 Protein of unknown function (DUF4199) - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000001263 265.0
DYD1_k127_6530574_4 Belongs to the bacterial ribosomal protein bL27 family K02899 GO:0003674,GO:0003735,GO:0005198,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0015934,GO:0022625,GO:0022626,GO:0032991,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:1990904 - 0.000000000000000000000000000000000000000000000005575 172.0
DYD1_k127_6540635_0 Outer membrane efflux protein - - - 4.383e-243 755.0
DYD1_k127_6540635_1 lycopene cyclase K06443 - 5.5.1.19 1.225e-199 625.0
DYD1_k127_6540635_2 Belongs to the FPP GGPP synthase family K13789 - 2.5.1.1,2.5.1.10,2.5.1.29 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007518 532.0
DYD1_k127_6540635_3 Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family K03585 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004384 420.0
DYD1_k127_6540635_4 transcriptional regulator - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001305 334.0
DYD1_k127_6540635_5 Sigma-70, region 4 K03088 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001428 306.0
DYD1_k127_6540635_6 - - - - 0.0000000000000000000000000000000000003844 144.0
DYD1_k127_6547582_0 protein conserved in bacteria K09760 - - 4.97e-223 699.0
DYD1_k127_6547582_1 Catalyzes the oxidation of glucose 6-phosphate to 6- phosphogluconolactone K00036 - 1.1.1.363,1.1.1.49 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002197 565.0
DYD1_k127_6547582_2 6-phosphogluconolactonase K01057 - 3.1.1.31 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001889 431.0
DYD1_k127_6547582_3 Thioesterase superfamily - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000002989 273.0
DYD1_k127_6547582_4 COG1120 ABC-type cobalamin Fe3 -siderophores transport systems, ATPase components K02013 - 3.6.3.34 0.00000000000000000000000000000000000000000000000000000000000000000000000881 243.0
DYD1_k127_6547582_5 - - - - 0.00000000000000000000000000000000000000000000000000000000000001727 216.0
DYD1_k127_6547582_6 Protein of unknown function (DUF559) - - - 0.0000000000000000000000000000000001493 136.0
DYD1_k127_6547582_7 Protein of unknown function (DUF559) - - - 0.0000000000000006372 78.0
DYD1_k127_6567643_0 ABC transporter K02010 - 3.6.3.30 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007311 538.0
DYD1_k127_6567643_1 Belongs to the glycosyl hydrolase 43 family - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000001638 294.0
DYD1_k127_6567643_2 chain release factor K15034 - - 0.000000000000000000000000000000000000003095 150.0
DYD1_k127_6573224_0 Ferredoxin--NADP reductase K00384 - 1.8.1.9 2.446e-218 679.0
DYD1_k127_6573224_1 transcriptional regulator - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000001416 267.0
DYD1_k127_657578_0 TonB-dependent receptor plug - - - 0.0 1437.0
DYD1_k127_657578_1 Starch-binding associating with outer membrane - - - 0.0000000000000000000000000000000000000000000000000000001959 196.0
DYD1_k127_6599426_0 COG2366 Protein related to penicillin acylase - - - 0.0 1331.0
DYD1_k127_6599426_1 COGs COG1512 Beta-propeller domains of methanol dehydrogenase type K06872 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008945 449.0
DYD1_k127_6599426_2 - - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008438 387.0
DYD1_k127_6599426_3 Ferredoxin K04755 - - 0.0000000000000000000000000000000000000000000000000000000000000332 214.0
DYD1_k127_6599426_4 Ferredoxin--NADP reductase K00384 - 1.8.1.9 0.0000000000000000000000000000000000000000000000000000000000004807 210.0
DYD1_k127_6599426_5 23S rRNA-intervening sequence protein - - - 0.00000000000000000000000000000000000000000000000000000000006792 205.0
DYD1_k127_6605347_0 gtp-binding protein typa K06207 - - 1.626e-270 834.0
DYD1_k127_6605347_1 Transcriptional regulator sugar kinase K00845,K00886 - 2.7.1.2,2.7.1.63 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003959 474.0
DYD1_k127_6605347_2 atp-binding protein K09812 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006844 439.0
DYD1_k127_6605347_3 peptidyl-tyrosine sulfation - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008325 340.0
DYD1_k127_6605347_4 LemA family K03744 - - 0.0000000000000000000000000000000000000000000000000000000000000003687 224.0
DYD1_k127_6605347_5 tetratricopeptide repeat - - - 0.0000000000000000000000000000000000000000000000000000000005688 202.0
DYD1_k127_6616648_0 Competence protein K02238 - - 7.754e-304 944.0
DYD1_k127_6616648_1 amino acid peptide transporter K03305 - - 0.0000000000000000000000007029 104.0
DYD1_k127_6619020_0 that it carries out the mismatch recognition step. This protein has a weak ATPase activity K03555 GO:0003674,GO:0003676,GO:0003677,GO:0003684,GO:0003690,GO:0003824,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0006139,GO:0006259,GO:0006281,GO:0006298,GO:0006725,GO:0006807,GO:0006950,GO:0006974,GO:0008094,GO:0008150,GO:0008152,GO:0009987,GO:0016462,GO:0016787,GO:0016817,GO:0016818,GO:0016887,GO:0017111,GO:0030983,GO:0032300,GO:0032991,GO:0033554,GO:0034641,GO:0042623,GO:0043170,GO:0044237,GO:0044238,GO:0044260,GO:0044424,GO:0044464,GO:0046483,GO:0050896,GO:0051716,GO:0071704,GO:0090304,GO:0097159,GO:1901360,GO:1901363,GO:1990391 - 0.0 1126.0
DYD1_k127_6619020_1 Methyltransferase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004292 301.0
DYD1_k127_6619020_2 Pfam 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase (HPPK) K00950 - 2.7.6.3 0.000000000000000000000000000000164 126.0
DYD1_k127_6673175_0 it binds specifically double-stranded DNA at a 9 bp consensus (dnaA box) 5'-TTATC CA A CA A-3'. DnaA binds to ATP and to acidic phospholipids K02313 GO:0003674,GO:0003676,GO:0003677,GO:0003688,GO:0003690,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005886,GO:0006139,GO:0006259,GO:0006260,GO:0006261,GO:0006270,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0016020,GO:0034641,GO:0034645,GO:0043170,GO:0043565,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044424,GO:0044464,GO:0046483,GO:0071704,GO:0071944,GO:0090304,GO:0097159,GO:1901360,GO:1901363,GO:1901576,GO:1990837 - 2.509e-306 940.0
DYD1_k127_6673175_1 PFAM Uncharacterised protein family UPF0029, Impact, N-terminal - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006605 332.0
DYD1_k127_6673175_2 thioesterase K07107 - - 0.0000000000000000000000000000000000000000000000000000000000000000000002843 239.0
DYD1_k127_6673175_3 Low molecular weight phosphotyrosine protein phosphatase K01104 - 3.1.3.48 0.000000000000000000000000000000000000000000001813 167.0
DYD1_k127_6673175_4 EamA-like transporter family - - - 0.00000000000000000000000000000000002975 135.0
DYD1_k127_6675366_0 TonB-dependent Receptor Plug Domain - - - 4.164e-292 908.0
DYD1_k127_6675366_1 Common central domain of tyrosinase K00505 - 1.14.18.1 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008234 499.0
DYD1_k127_6675366_2 Heavy-metal-associated domain K08364 - - 0.0000000000000000000000000000000003848 135.0
DYD1_k127_6684456_0 alanine symporter K03310 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003101 563.0
DYD1_k127_6684456_1 Protein of unknown function (DUF2851) - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005851 374.0
DYD1_k127_6684456_2 PspC family transcriptional regulator - - - 0.00000000000000000000000000000000000000006891 152.0
DYD1_k127_668463_0 acyl-CoA dehydrogenase - - - 1.156e-240 745.0
DYD1_k127_668463_1 COG1555 DNA uptake protein and related DNA-binding - - - 0.000000000000000000000000000000000000000000004417 165.0
DYD1_k127_670555_0 Belongs to the class-II aminoacyl-tRNA synthetase family. Phe-tRNA synthetase alpha subunit type 1 subfamily K01889 GO:0003674,GO:0003824,GO:0004812,GO:0004826,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006082,GO:0006139,GO:0006399,GO:0006412,GO:0006418,GO:0006432,GO:0006518,GO:0006520,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0016070,GO:0016874,GO:0016875,GO:0019538,GO:0019752,GO:0034641,GO:0034645,GO:0034660,GO:0043038,GO:0043039,GO:0043043,GO:0043170,GO:0043436,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044281,GO:0044424,GO:0044464,GO:0046483,GO:0071704,GO:0090304,GO:0140098,GO:0140101,GO:1901360,GO:1901564,GO:1901566,GO:1901576 6.1.1.20 1.231e-214 667.0
DYD1_k127_670555_1 COG0659 Sulfate permease and related K03321 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004516 512.0
DYD1_k127_670555_2 Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family K03585 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001807 460.0
DYD1_k127_670555_3 regulation of RNA biosynthetic process - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000001512 254.0
DYD1_k127_6713962_0 Catalyzes the conversion of inosine 5'-phosphate (IMP) to xanthosine 5'-phosphate (XMP), the first committed and rate- limiting step in the de novo synthesis of guanine nucleotides, and therefore plays an important role in the regulation of cell growth K00088 - 1.1.1.205 4.086e-266 822.0
DYD1_k127_6713962_1 Specifically catalyzes the decarboxylation of meso- diaminopimelate (meso-DAP) to L-lysine K01586 - 4.1.1.20 7.579e-259 799.0
DYD1_k127_6713962_2 COG2143 Thioredoxin-related protein - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008195 349.0
DYD1_k127_6718613_0 MOSC domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000717 347.0
DYD1_k127_6718613_1 Belongs to the sigma-70 factor family. ECF subfamily K03088 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000002461 255.0
DYD1_k127_6718613_2 - - - - 0.00000000000000000000000000000000000000000000000000000000001442 207.0
DYD1_k127_6718613_3 - - - - 0.00000000000000000000000000000000000000000000002946 171.0
DYD1_k127_6721882_0 - Catabolite gene activator and regulatory subunit of cAMP-dependent protein - - - 1.239e-290 896.0
DYD1_k127_6721882_1 GH3 auxin-responsive promoter - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003778 571.0
DYD1_k127_6721882_2 peptidase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001462 547.0
DYD1_k127_6721882_3 Belongs to the ompA family - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006692 432.0
DYD1_k127_6721882_4 GH3 auxin-responsive promoter - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006556 321.0
DYD1_k127_6721882_5 Part of the twin-arginine translocation (Tat) system that transports large folded proteins containing a characteristic twin-arginine motif in their signal peptide across membranes. TatA could form the protein-conducting channel of the Tat system K03116 - - 0.0000000000000000000000008736 104.0
DYD1_k127_6726547_0 Belongs to the sodium solute symporter (SSF) (TC 2.A.21) family - - - 9.2e-263 816.0
DYD1_k127_6726547_1 May play a role in DNA repair. It seems to be involved in an RecBC-independent recombinational process of DNA repair. It may act with RecF and RecO K06187 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004302 372.0
DYD1_k127_6727618_0 Protein of unknown function (DUF3307) - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002669 404.0
DYD1_k127_6727618_1 DNA-templated transcription, initiation - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002554 338.0
DYD1_k127_6727618_2 FMN_bind - - - 0.000000000000000000000000000000000000000000000000000000000000003732 218.0
DYD1_k127_6727618_3 - - - - 0.000000000000000000000000000000278 128.0
DYD1_k127_6734189_0 Domain of unknown function (DUF4331) - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001196 419.0
DYD1_k127_6734189_1 Domain of unknown function (DUF4331) - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005082 399.0
DYD1_k127_6734189_2 LETM1-like protein - - - 0.00000000000000000001475 91.0
DYD1_k127_6743124_0 PFAM Signal transduction histidine kinase, internal region - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006078 365.0
DYD1_k127_6743124_1 TonB-dependent receptor plug K02014,K16089 - - 0.0000000000000000000000000000000000000000000000000000000000000944 213.0
DYD1_k127_6743124_2 Response regulator of the LytR AlgR family K02477 - - 0.000000000000000000000000000000000000000000000000000000000005911 216.0
DYD1_k127_6750232_0 selenocysteine lyase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008834 572.0
DYD1_k127_6750232_1 Provides the (R)-glutamate required for cell wall biosynthesis K01776 - 5.1.1.3 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001751 417.0
DYD1_k127_6750232_2 Key enzyme in folate metabolism. Catalyzes an essential reaction for de novo glycine and purine synthesis, and for DNA precursor synthesis K00287 - 1.5.1.3 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000001001 297.0
DYD1_k127_6750232_3 2TM domain - - - 0.000000000000000000000000000000000000000000000000000000000007775 210.0
DYD1_k127_6782006_0 COG0380 Trehalose-6-phosphate synthase K16055 - 2.4.1.15,3.1.3.12 0.0 1342.0
DYD1_k127_6782006_1 acyl-CoA dehydrogenase - - - 0.0 1152.0
DYD1_k127_6782006_2 COG3387 Glucoamylase and related glycosyl K01178 - 3.2.1.3 0.0 1068.0
DYD1_k127_6782006_3 SnoaL-like domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003843 388.0
DYD1_k127_6785425_0 Pfam 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase (HPPK) K00950 - 2.7.6.3 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008216 486.0
DYD1_k127_6785425_1 signal peptide peptidase SppA K04773 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005661 380.0
DYD1_k127_6789804_0 Belongs to the peptidase S41A family K03797 - 3.4.21.102 9.351e-230 714.0
DYD1_k127_6789804_1 HupE UreJ protein - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001055 325.0
DYD1_k127_6789804_2 deaminase K01493 - 3.5.4.12 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000008189 281.0
DYD1_k127_6789804_3 DnaJ domain protein K05801 - - 0.0000000000000000000000000000000000000000000000000000000000000000000001918 239.0
DYD1_k127_6810007_0 Arginyl-tRNA synthetase K01887 GO:0003674,GO:0003824,GO:0004812,GO:0004814,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006082,GO:0006139,GO:0006399,GO:0006412,GO:0006418,GO:0006420,GO:0006518,GO:0006520,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0016070,GO:0016874,GO:0016875,GO:0019538,GO:0019752,GO:0034641,GO:0034645,GO:0034660,GO:0043038,GO:0043039,GO:0043043,GO:0043170,GO:0043436,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044281,GO:0044424,GO:0044464,GO:0046483,GO:0071704,GO:0090304,GO:0140098,GO:0140101,GO:1901360,GO:1901564,GO:1901566,GO:1901576 6.1.1.19 8.058e-320 983.0
DYD1_k127_6810007_1 CarboxypepD_reg-like domain - - - 1.896e-244 762.0
DYD1_k127_6810007_2 - - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000001615 252.0
DYD1_k127_6810007_3 bleomycin resistance protein - - - 0.0000000000000000000000000000000000000009194 151.0
DYD1_k127_6810007_4 - - - - 0.00000000002317 69.0
DYD1_k127_6812507_0 Ribosomal protein S6 modification K05844 - - 1.821e-271 838.0
DYD1_k127_6812507_1 Deoxyhypusine synthase K00809 - 2.5.1.46 6.447e-210 653.0
DYD1_k127_6812507_2 Uncharacterised ACR, YagE family COG1723 - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002144 388.0
DYD1_k127_6812507_3 glyoxalase bleomycin resistance protein dioxygenase K06991 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000002951 254.0
DYD1_k127_6812507_4 - - - - 0.0000000000000000000000000000000000000000001592 162.0
DYD1_k127_6812507_5 Belongs to the arginase family K01480 - 3.5.3.11 0.00000000000000000000001025 102.0
DYD1_k127_6812507_6 Thioredoxin reductase K00384 - 1.8.1.9 0.0000000000000000000008535 97.0
DYD1_k127_6812507_7 NUDIX domain - - - 0.000000000000000000001561 99.0
DYD1_k127_6812860_0 membrane transporter protein K07090 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001963 430.0
DYD1_k127_6812860_1 - - - - 0.0000000000000000000000000000000000000000000000000000000000002029 215.0
DYD1_k127_6812860_2 DNA-binding transcription factor activity - - - 0.00006445 51.0
DYD1_k127_6812907_0 Catalyzes the conversion of D-ribulose 5-phosphate to formate and 3,4-dihydroxy-2-butanone 4-phosphate K14652 - 3.5.4.25,4.1.99.12 1.149e-223 695.0
DYD1_k127_6812907_1 Permease, YjgP YjgQ family K07091 - - 2.245e-209 655.0
DYD1_k127_6812907_2 TIGRFAM Bacterial surface protein 26-residue repeat - - - 0.000000000000000000000000000000000002141 140.0
DYD1_k127_6837548_0 Belongs to the sodium solute symporter (SSF) (TC 2.A.21) family K03307 - - 4.628e-249 770.0
DYD1_k127_6837548_1 Catalyzes the interconversion of D-xylose to D-xylulose K01805 - 5.3.1.5 0.00000000000000000000000000000000000000000000000000000000000000000000004073 241.0
DYD1_k127_6838346_0 Belongs to the glycerate kinase type-1 family K00865 - 2.7.1.165 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006494 589.0
DYD1_k127_6838346_1 CarboxypepD_reg-like domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004429 441.0
DYD1_k127_6838346_2 Acetyltransferase (GNAT) domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006204 324.0
DYD1_k127_6838346_3 Ferritin-like domain K04047 - - 0.0000000000000000000000000000000000000008661 149.0
DYD1_k127_6838346_4 - - - - 0.00000000000000000000000000000000003057 140.0
DYD1_k127_6842247_0 abc transporter (atp-binding protein) - - - 0.0 1085.0
DYD1_k127_6842247_1 Acetyl-CoA carboxylase, carboxyltransferase component (subunits alpha and beta) - - - 0.0 1020.0
DYD1_k127_6842247_2 protein containing a divergent version of the methyl-accepting chemotaxis-like domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001584 529.0
DYD1_k127_6842247_3 Involved in the TCA cycle. Catalyzes the stereospecific interconversion of fumarate to L-malate K01679 - 4.2.1.2 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000787 519.0
DYD1_k127_6842247_4 Oxidoreductase family, NAD-binding Rossmann fold - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001407 499.0
DYD1_k127_6842247_5 of the beta-lactamase fold - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001189 390.0
DYD1_k127_6842247_6 - - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004948 324.0
DYD1_k127_6842247_7 - - - - 0.00000000000000000000000000000003741 126.0
DYD1_k127_6842247_8 Xaa-Pro aminopeptidase - - - 0.000000000000000000000000004173 110.0
DYD1_k127_6864865_0 ubiE/COQ5 methyltransferase family K00574 - 2.1.1.79 1.456e-201 634.0
DYD1_k127_6864865_1 N-acetylmuramoyl-L-alanine amidase K01448 - 3.5.1.28 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007039 541.0
DYD1_k127_6864865_2 The purine nucleoside phosphorylases catalyze the phosphorolytic breakdown of the N-glycosidic bond in the beta- (deoxy)ribonucleoside molecules, with the formation of the corresponding free purine bases and pentose-1-phosphate K03783 - 2.4.2.1 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006461 483.0
DYD1_k127_6864865_3 protein conserved in bacteria K09931 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002458 338.0
DYD1_k127_6864865_4 N-Acetylmuramoyl-L-alanine amidase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000002917 297.0
DYD1_k127_6864865_5 - - - - 0.00000000000000000000000000001067 119.0
DYD1_k127_6865508_0 Catalyzes the cleavage of L-kynurenine (L-Kyn) and L-3- hydroxykynurenine (L-3OHKyn) into anthranilic acid (AA) and 3- hydroxyanthranilic acid (3-OHAA), respectively K01556 - 3.7.1.3 6.44e-256 792.0
DYD1_k127_6865508_1 major facilitator - - - 1.018e-216 677.0
DYD1_k127_6865508_2 O-methyltransferase K00588 - 2.1.1.104 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002817 377.0
DYD1_k127_6865508_3 acetyltransferase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000006009 243.0
DYD1_k127_6865508_4 PAP2 superfamily K19302 - 3.6.1.27 0.000000000000000000000000000000000000000000000000000000000000000001206 231.0
DYD1_k127_6865508_5 Part of the twin-arginine translocation (Tat) system that transports large folded proteins containing a characteristic twin-arginine motif in their signal peptide across membranes. TatA could form the protein-conducting channel of the Tat system K03116,K03117 - - 0.00000000000000000000000000000000000000001804 154.0
DYD1_k127_6865508_6 Belongs to the cation diffusion facilitator (CDF) transporter (TC 2.A.4) family - - - 0.00000000000000000000000007054 107.0
DYD1_k127_6866632_0 Belongs to the FBPase class 1 family K03841 - 3.1.3.11 4.014e-215 669.0
DYD1_k127_6866632_1 DEAD DEAH box helicase K03724 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001627 605.0
DYD1_k127_6866632_2 Belongs to the aspartokinase family K00928 - 2.7.2.4 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004135 556.0
DYD1_k127_6866632_3 acetyltransferase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005579 300.0
DYD1_k127_6866632_4 Tellurite resistance protein TerB - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000005291 253.0
DYD1_k127_6879909_0 COG2939 Carboxypeptidase C (cathepsin A) - - - 1.642e-283 872.0
DYD1_k127_6879909_1 glycosyl transferase, family 2 - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002386 572.0
DYD1_k127_6879909_2 COG2755 Lysophospholipase L1 and related - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003208 371.0
DYD1_k127_6879909_3 N-formylglutamate amidohydrolase - - - 0.00000000000000000000000000000000000000000000000002126 182.0
DYD1_k127_688574_0 Catalyzes the synthesis of GMP from XMP K01951 GO:0003674,GO:0003824,GO:0003921,GO:0003922,GO:0006139,GO:0006163,GO:0006164,GO:0006177,GO:0006725,GO:0006753,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009116,GO:0009117,GO:0009119,GO:0009123,GO:0009124,GO:0009126,GO:0009127,GO:0009150,GO:0009152,GO:0009156,GO:0009161,GO:0009163,GO:0009165,GO:0009167,GO:0009168,GO:0009259,GO:0009260,GO:0009987,GO:0016874,GO:0016879,GO:0016884,GO:0018130,GO:0019438,GO:0019637,GO:0019693,GO:0034404,GO:0034641,GO:0034654,GO:0042278,GO:0042451,GO:0042455,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0044283,GO:0046037,GO:0046128,GO:0046129,GO:0046390,GO:0046483,GO:0055086,GO:0071704,GO:0072521,GO:0072522,GO:0090407,GO:1901068,GO:1901070,GO:1901135,GO:1901137,GO:1901293,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576,GO:1901657,GO:1901659 6.3.5.2 1.294e-321 986.0
DYD1_k127_688574_1 beta-phosphoglucomutase K01838 - 5.4.2.6 0.000000000000000000000000000000000000002718 147.0
DYD1_k127_6892479_0 Belongs to the prokaryotic molybdopterin-containing oxidoreductase family - - - 0.0 1403.0
DYD1_k127_6892479_1 Nucleotidyltransferase DNA polymerase involved in DNA repair K03502 - - 2.902e-249 772.0
DYD1_k127_6892479_2 Belongs to the arginase family K01479,K12255 - 3.5.3.7,3.5.3.8 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000774 430.0
DYD1_k127_6892479_3 acyl-CoA dehydrogenase K00252 - 1.3.8.6 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001015 426.0
DYD1_k127_6892479_4 Belongs to the peptidase S24 family K03503 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000001416 267.0
DYD1_k127_6892479_5 - - - - 0.000000000000000000000000000000000003303 148.0
DYD1_k127_6900025_0 Histidine kinase - - - 1.666e-207 649.0
DYD1_k127_6900025_1 candidate polyfunctional acetylxylan esterase b-xylosidase A-L-arabinofuranosidase, CBM9 module, glycoside hydrolase family 43 protein and carbohydrate esterase family 6 protein - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009211 447.0
DYD1_k127_6900025_2 Transcription elongation factor - - - 0.000000000000000000000000000000000000000000000000000005815 193.0
DYD1_k127_6915470_0 Outer membrane receptor - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003568 496.0
DYD1_k127_6915470_1 Type I phosphodiesterase / nucleotide pyrophosphatase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001177 350.0
DYD1_k127_6924891_0 Transposase - - - 3.13e-277 859.0
DYD1_k127_6924891_1 TIGRFAM SusC_RagA_signa TonB-dependent outer membrane receptor, SusC RagA subfamily, signature region K02014 - - 1.553e-248 783.0
DYD1_k127_6924891_2 helix_turn_helix, arabinose operon control protein - - - 0.00000000000000000000000000000000000000000000000001293 183.0
DYD1_k127_6934852_0 argininosuccinate synthase K01940 - 6.3.4.5 4.386e-214 666.0
DYD1_k127_6934852_1 Catalyzes the reduction of 1-pyrroline-5-carboxylate (PCA) to L-proline K00286 - 1.5.1.2 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002474 453.0
DYD1_k127_6934852_2 Catalyzes the NADPH-dependent reduction of N-acetyl-5- glutamyl phosphate to yield N-acetyl-L-glutamate 5-semialdehyde K00145 - 1.2.1.38 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001451 374.0
DYD1_k127_6941555_0 NhaP-type Na H and K H - - - 0.0 1027.0
DYD1_k127_6941555_1 Sodium:sulfate symporter transmembrane region - - - 2.09e-259 804.0
DYD1_k127_6941555_2 beta-lactamase - - - 0.0000000000000000000000000000000000000000000000000201 179.0
DYD1_k127_6954738_0 PFAM Signal transduction histidine kinase, internal region - - - 2.508e-280 875.0
DYD1_k127_6954738_1 Cell wall formation. Adds enolpyruvyl to UDP-N- acetylglucosamine K00790 - 2.5.1.7 1.053e-272 841.0
DYD1_k127_6954738_2 Belongs to the pirin family K06911 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000001096 273.0
DYD1_k127_6954738_3 Domain of unknown function (DUF4290) - - - 0.00000000000000000000000000000000000000000001052 163.0
DYD1_k127_6961541_0 Chaperone involved in the correct folding and assembly of outer membrane proteins. Recognizes specific patterns of aromatic residues and the orientation of their side chains, which are found more frequently in integral outer membrane proteins. May act in both early periplasmic and late outer membrane-associated steps of protein maturation - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001431 509.0
DYD1_k127_6961541_1 Beta-lactamase enzyme family - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004678 393.0
DYD1_k127_6961541_2 oxidoreductase activity, acting on CH-OH group of donors - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000004169 267.0
DYD1_k127_6961541_3 - - - - 0.00000000000000000000000000000000000000003625 153.0
DYD1_k127_6961541_4 PPIC-type PPIASE domain K03771 - 5.2.1.8 0.0000000000000000000000000614 109.0
DYD1_k127_6964822_0 Fatty acid hydroxylase superfamily - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008707 406.0
DYD1_k127_6964822_1 alpha/beta hydrolase fold K00641 - 2.3.1.31 0.0000000000000000000000000000000000000000000000000000000000005931 223.0
DYD1_k127_6964822_2 Tetratricopeptide repeat - - - 0.00000000000000000000001402 100.0
DYD1_k127_6975838_0 The UvrABC repair system catalyzes the recognition and processing of DNA lesions. UvrA is an ATPase and a DNA-binding protein. A damage recognition complex composed of 2 UvrA and 2 UvrB subunits scans DNA for abnormalities. When the presence of a lesion has been verified by UvrB, the UvrA molecules dissociate K03701 - - 6.004e-253 781.0
DYD1_k127_6975838_1 DNA repair enzyme that has both DNA N-glycosylase activity and AP-lyase activity. The DNA N-glycosylase activity releases various damaged pyrimidines from DNA by cleaving the N- glycosidic bond, leaving an AP (apurinic apyrimidinic) site. The AP-lyase activity cleaves the phosphodiester bond 3' to the AP site by a beta-elimination, leaving a 3'-terminal unsaturated sugar and a product with a terminal 5'-phosphate K10773 - 4.2.99.18 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002412 420.0
DYD1_k127_6975838_2 Belongs to the sigma-70 factor family. ECF subfamily K03088 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002058 370.0
DYD1_k127_6975838_3 - - - - 0.000006783 49.0
DYD1_k127_6981087_0 - - - - 0.0000000000000000000000000000000000000000000000000000000000000485 226.0
DYD1_k127_6981087_1 PFAM Formylglycine-generating sulfatase enzyme K20333 - - 0.000000000000000000000000001705 123.0
DYD1_k127_6981087_2 - - - - 0.00000000000000000001124 94.0
DYD1_k127_6981087_3 PFAM Formylglycine-generating sulfatase enzyme - - - 0.000000002466 61.0
DYD1_k127_6983585_0 GlutRNAGln amidotransferase subunit D K01424 - 3.5.1.1 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004681 565.0
DYD1_k127_6983585_1 Mota tolq exbb proton channel K03561 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001194 434.0
DYD1_k127_6983585_2 Pfam Biopolymer transport protein ExbD TolR - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005837 377.0
DYD1_k127_6983585_3 - - - - 0.00000000000000000000000000000000000000000000000000000000000000163 221.0
DYD1_k127_6983585_4 Pfam Biopolymer transport protein ExbD TolR K03559 - - 0.0000000000000000004633 86.0
DYD1_k127_6987857_0 peptidase K01278 - 3.4.14.5 0.0 1290.0
DYD1_k127_6987857_1 Belongs to the HMG-CoA reductase family K00054 - 1.1.1.88 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008806 587.0
DYD1_k127_6987857_2 amino acid peptide transporter K03305 - - 0.0000000000000000000000000000000000000000000000000008578 183.0
DYD1_k127_6987857_3 PFAM integrase family protein - - - 0.000000000003215 68.0
DYD1_k127_699106_0 efflux transporter, outer membrane factor (OMF) lipoprotein, NodT family - - - 1.426e-262 813.0
DYD1_k127_699106_1 Aminotransferase, class I K00817 - 2.6.1.9 1.544e-224 699.0
DYD1_k127_699106_2 Auxin Efflux Carrier K07088 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001094 502.0
DYD1_k127_699106_3 Bacterial regulatory proteins, tetR family - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004418 317.0
DYD1_k127_699106_4 Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family K03296 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000003526 248.0
DYD1_k127_699106_5 YhhN family - - - 0.000000000000000000000000000000000000000000000000000000000000000000000006414 248.0
DYD1_k127_719626_0 TonB-dependent receptor K02014,K16089 - - 2.229e-259 800.0
DYD1_k127_719626_1 Belongs to the sodium solute symporter (SSF) (TC 2.A.21) family K03307 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001065 582.0
DYD1_k127_719626_2 Inositol oxygenase K00469 - 1.13.99.1 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002256 556.0
DYD1_k127_72182_0 Heme copper-type cytochrome quinol oxidase subunit 3 K02276 - 1.9.3.1 3.167e-197 616.0
DYD1_k127_72182_1 protein SCO1 SenC PrrC involved in biogenesis of respiratory and photosynthetic systems K07152 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001399 442.0
DYD1_k127_72182_2 Prokaryotic Cytochrome C oxidase subunit IV - - - 0.000000000000000000000000000000000000000000000000000000000000000000000401 238.0
DYD1_k127_72182_3 - - - - 0.000000000000000000000000000000000000000000000000000000000000004909 224.0
DYD1_k127_72182_4 membrane K08976 - - 0.00000000000000000000000000003791 117.0
DYD1_k127_730941_0 NADH dehydrogenase K03885 - 1.6.99.3 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003072 352.0
DYD1_k127_730941_1 - - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007064 346.0
DYD1_k127_730941_2 Belongs to the sigma-70 factor family. ECF subfamily K03088 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001958 316.0
DYD1_k127_746940_0 Phosphoribosylformylglycinamidine synthase involved in the purines biosynthetic pathway. Catalyzes the ATP-dependent conversion of formylglycinamide ribonucleotide (FGAR) and glutamine to yield formylglycinamidine ribonucleotide (FGAM) and glutamate K01952 - 6.3.5.3 0.0 1272.0
DYD1_k127_746940_1 AraC family transcriptional regulator - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000501 534.0
DYD1_k127_746940_2 Belongs to the short-chain dehydrogenases reductases (SDR) family - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001242 454.0
DYD1_k127_746940_3 Belongs to the class I-like SAM-binding methyltransferase superfamily. RsmB NOP family K03500 - 2.1.1.176 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008941 365.0
DYD1_k127_749161_0 mevalonate kinase K00869 - 2.7.1.36 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001605 590.0
DYD1_k127_749161_1 Prenyltransferase K03179 - 2.5.1.39 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001297 503.0
DYD1_k127_749161_2 Belongs to the pseudouridine synthase RsuA family K06178 - 5.4.99.22 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002937 495.0
DYD1_k127_749161_3 diphosphomevalonate decarboxylase K01597 - 4.1.1.33 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001908 482.0
DYD1_k127_755818_0 PFAM Pyridine nucleotide-disulphide oxidoreductase K00384 - 1.8.1.9 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006084 437.0
DYD1_k127_755818_1 Belongs to the ribulose-phosphate 3-epimerase family K01783 - 5.1.3.1 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007468 395.0
DYD1_k127_755818_2 Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released K03086 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000001913 256.0
DYD1_k127_755818_3 Putative member of DMT superfamily (DUF486) K09922 - - 0.00000000000000000000000000000000000000000000000000000002469 199.0
DYD1_k127_755818_4 Ketosteroid isomerase-related protein - - - 0.0000000000000000000000000000000000000000000000001466 179.0
DYD1_k127_755818_5 PFAM Pyridine nucleotide-disulphide oxidoreductase K00384 - 1.8.1.9 0.0000000000000000000000000000000000000000008407 160.0
DYD1_k127_755818_6 ligase activity - - - 0.00004487 45.0
DYD1_k127_758558_0 Methylenetetrahydrofolate reductase K00297 - 1.5.1.20 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004275 451.0
DYD1_k127_758558_1 PFAM Lipid A 3-O-deacylase (PagL) - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001154 340.0
DYD1_k127_772466_0 Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family K01845 - 5.4.3.8 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002489 571.0
DYD1_k127_772466_1 FCD - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002285 370.0
DYD1_k127_772466_2 SMP-30 Gluconolaconase LRE-like region K01053 - 3.1.1.17 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004239 359.0
DYD1_k127_772466_3 -O-antigen - - - 0.0000004949 53.0
DYD1_k127_773283_0 Pyruvate 2-oxoglutarate dehydrogenase complex, dehydrogenase (E1) component, eukaryotic type K11381 - 1.2.4.4 0.0 1198.0
DYD1_k127_773283_1 Lipocalin-like domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000001714 293.0
DYD1_k127_773283_2 Belongs to the iron ascorbate-dependent oxidoreductase family - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000356 253.0
DYD1_k127_773283_3 Belongs to the ompA family - - - 0.00000000000000000000000000000000428 128.0
DYD1_k127_796161_0 glycosyltransferase - - - 1.567e-194 612.0
DYD1_k127_796161_1 Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain K07658 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001413 438.0
DYD1_k127_796161_2 Catalyzes the formation of N(7)-methylguanine at position 46 (m7G46) in tRNA K03439 GO:0001510,GO:0003674,GO:0003824,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006139,GO:0006396,GO:0006399,GO:0006400,GO:0006725,GO:0006807,GO:0008033,GO:0008150,GO:0008152,GO:0008168,GO:0008173,GO:0008175,GO:0008176,GO:0008757,GO:0009451,GO:0009987,GO:0010467,GO:0016070,GO:0016423,GO:0016740,GO:0016741,GO:0030488,GO:0032259,GO:0032991,GO:0034470,GO:0034641,GO:0034660,GO:0034708,GO:0036265,GO:0043170,GO:0043412,GO:0043414,GO:0043527,GO:0044237,GO:0044238,GO:0044260,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0071704,GO:0090304,GO:0106004,GO:0140098,GO:0140101,GO:1901360,GO:1902494,GO:1990234 2.1.1.33 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007431 407.0
DYD1_k127_796161_3 Pfam LysE type translocator - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003885 298.0
DYD1_k127_796161_4 Histidine kinase K07636 - 2.7.13.3 0.00000000000000000000000000000000000000000000000000000000000004742 226.0
DYD1_k127_796161_5 receptor - - - 0.000000001287 59.0
DYD1_k127_79981_0 Peptidoglycan synthetase K01924,K02558 - 6.3.2.45,6.3.2.8 6.727e-245 761.0
DYD1_k127_79981_1 Cupin domain - - - 0.000000000000000000000000000000000000000000000000000000242 194.0
DYD1_k127_79981_2 short-chain dehydrogenase K00059 - 1.1.1.100 0.00000000000000000000000000000000000001564 146.0
DYD1_k127_805681_0 COGs COG1670 Acetyltransferase including N-acetylase of ribosomal protein K03790 - 2.3.1.128 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000001914 286.0
DYD1_k127_805681_1 COG1670 acetyltransferases, including N-acetylases of ribosomal proteins - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000008539 266.0
DYD1_k127_805681_2 Sigma-70 region 2 K03088 - - 0.000000000000000000000000000000000000000000000000000000000004883 213.0
DYD1_k127_805681_3 - - - - 0.00000000000000000000000000000000000000003851 154.0
DYD1_k127_805681_4 COG1680 Beta-lactamase class C and other penicillin binding - - - 0.00000000000000000000000000000000001301 136.0
DYD1_k127_805681_5 COG2755 Lysophospholipase L1 and related K10804 - 3.1.1.5 0.0000000000000003132 78.0
DYD1_k127_8110_0 hydrolase of the alpha beta superfamily K07017 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004531 604.0
DYD1_k127_8110_1 - - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001756 326.0
DYD1_k127_8110_2 - - - - 0.0000000000000000000000000000000000000000000054 166.0
DYD1_k127_81681_0 hydrolase, family 3 - - - 0.0 1080.0
DYD1_k127_81681_1 N-acetyl-alpha-D-glucosaminyl L-malate synthase K00754 - - 5.846e-230 713.0
DYD1_k127_81681_2 OmpA family - - - 2.174e-212 663.0
DYD1_k127_81681_3 hydrolase, family 3 - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001057 482.0
DYD1_k127_81681_4 - - - - 0.000000000000000000000000000000000000001634 151.0
DYD1_k127_825865_0 3-demethylubiquinone-9 3-methyltransferase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000509 459.0
DYD1_k127_825865_1 Domain of unknown function (DU1801) - - - 0.000000000000000000000000000000000000000000000248 169.0
DYD1_k127_825865_2 3-demethylubiquinone-9 3-methyltransferase K04750 - - 0.0000000000000000000000000000000000003487 142.0
DYD1_k127_825865_3 DoxX family - - - 0.0000000000000000000000001974 106.0
DYD1_k127_82993_0 Amidohydrolase family K12960 - 3.5.4.28,3.5.4.31 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005 609.0
DYD1_k127_82993_1 Acetyltransferase (GNAT) domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001888 345.0
DYD1_k127_82993_2 - - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000001734 288.0
DYD1_k127_82993_3 Cupin 2, conserved barrel domain protein - - - 0.00000000000000000000000000003499 117.0
DYD1_k127_837076_0 Imidazolonepropionase and related - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003289 504.0
DYD1_k127_837076_1 Ketosteroid isomerase-related protein - - - 0.00000000000000000000000000000000000000005581 154.0
DYD1_k127_837076_2 short-chain dehydrogenase K00059 - 1.1.1.100 0.000000000000000000000000000000000000001923 147.0
DYD1_k127_837076_3 - - - - 0.00003292 49.0
DYD1_k127_862361_0 Glycosyl hydrolase family 20, catalytic domain K12373 - 3.2.1.52 3.123e-260 805.0
DYD1_k127_862361_1 transferase activity, transferring glycosyl groups - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002185 557.0
DYD1_k127_862361_2 Belongs to the transferase hexapeptide repeat family K00674 - 2.3.1.117 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001013 527.0
DYD1_k127_862361_3 Removes the formyl group from the N-terminal Met of newly synthesized proteins. Requires at least a dipeptide for an efficient rate of reaction. N-terminal L-methionine is a prerequisite for activity but the enzyme has broad specificity at other positions K01462 - 3.5.1.88 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007165 365.0
DYD1_k127_862361_4 UDP-galactopyranose mutase K01854 - 5.4.99.9 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001219 325.0
DYD1_k127_862361_5 - - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000001107 258.0
DYD1_k127_862361_6 Could be a nuclease involved in processing of the 5'-end of pre-16S rRNA K07447 GO:0000966,GO:0000967,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006139,GO:0006364,GO:0006396,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0009987,GO:0010467,GO:0016070,GO:0016072,GO:0022613,GO:0034470,GO:0034471,GO:0034641,GO:0034660,GO:0042254,GO:0043170,GO:0044085,GO:0044237,GO:0044238,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0071704,GO:0071840,GO:0090304,GO:1901360 - 0.000000000000000000000000000000000000000000000000000000000000001829 220.0
DYD1_k127_86378_0 unusual protein kinase - - - 4.906e-263 812.0
DYD1_k127_86378_1 epimerase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002685 508.0
DYD1_k127_86378_2 Conserved protein domain typically associated with flavoprotein oxygenases, DIM6 NTAB family - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001097 317.0
DYD1_k127_86378_3 - - - - 0.00000000000000000000000000000000000000000000000000000000005888 205.0
DYD1_k127_867069_0 ABC transporter permease K02004 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009968 327.0
DYD1_k127_867069_1 MacB-like periplasmic core domain K02004 - - 0.00000000000000000000000000000000000000000000000000000000006209 208.0
DYD1_k127_86971_0 histidine kinase HAMP region domain protein - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000236 513.0
DYD1_k127_86971_1 Protein of unknown function (DUF1275) - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002748 304.0
DYD1_k127_86971_2 TonB-dependent receptor K02014 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000824 267.0
DYD1_k127_86971_3 Transcriptional regulatory protein, C terminal K07665 - - 0.00000000000000000000000000000000000000000000004123 172.0
DYD1_k127_86971_4 - - - - 0.000000000000000000000000000000002206 136.0
DYD1_k127_86971_5 - - - - 0.000000000000000000000003399 108.0
DYD1_k127_876108_0 BNR repeat-like domain K01186 - 3.2.1.18 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002996 378.0
DYD1_k127_876108_1 Pkd domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003697 368.0
DYD1_k127_876108_2 Belongs to the DapA family K01639,K01707,K01714 - 4.1.3.3,4.2.1.41,4.3.3.7 0.0003059 46.0
DYD1_k127_87926_0 Regulator of cell autolysis - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001869 554.0
DYD1_k127_87926_1 COG3279 Response regulator of the LytR AlgR family K02477 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002233 407.0
DYD1_k127_87926_2 short-chain dehydrogenase K00059 - 1.1.1.100 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001028 311.0
DYD1_k127_87926_3 Domain of unknown function (DUF4136) - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000145 257.0
DYD1_k127_87926_4 - - - - 0.00000000000000000000000000000000000000000000000000000000000008257 214.0
DYD1_k127_87926_6 An essential GTPase which binds GTP, GDP and possibly (p)ppGpp with moderate affinity, with high nucleotide exchange rates and a fairly low GTP hydrolysis rate. Plays a role in control of the cell cycle, stress response, ribosome biogenesis and in those bacteria that undergo differentiation, in morphogenesis control K03979 - - 0.000000000000000000003735 93.0
DYD1_k127_896653_0 Sulfate permease K03321 - - 4.198e-301 926.0
DYD1_k127_896653_1 DinB family - - - 0.0000000000000000000000000003383 114.0
DYD1_k127_896653_2 - - - - 0.00000000000006227 74.0
DYD1_k127_898668_0 aminopeptidase K01256 - 3.4.11.2 5.247e-223 701.0
DYD1_k127_898668_1 Critical role in recombination and DNA repair. Helps process Holliday junction intermediates to mature products by catalyzing branch migration. Has a DNA unwinding activity characteristic of a DNA helicase with a 3'- to 5'- polarity. Unwinds branched duplex DNA (Y-DNA) K03655 - 3.6.4.12 2.883e-212 664.0
DYD1_k127_899006_0 COG0577 ABC-type antimicrobial peptide transport system permease component K02004 - - 0.0 1164.0
DYD1_k127_899006_1 COG0577 ABC-type antimicrobial peptide transport system permease component - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001955 456.0
DYD1_k127_900570_0 In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity K02335 - 2.7.7.7 0.0 1045.0
DYD1_k127_900570_1 NIPSNAP - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002513 415.0
DYD1_k127_900570_2 SET (Su(var)3-9, Enhancer-of-zeste, Trithorax) domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003655 376.0
DYD1_k127_900570_3 - - - - 0.000000000000000000000000000000000000000000000000000006225 197.0
DYD1_k127_900570_4 Thioredoxin - - - 0.0000000000000000000000000000000000000000005754 159.0
DYD1_k127_900570_5 Permeases of the major facilitator superfamily - - - 0.000000000000000002783 86.0
DYD1_k127_900570_6 - - - - 0.00000000000004531 80.0
DYD1_k127_900570_7 Major Facilitator Superfamily - - - 0.000006057 49.0
DYD1_k127_909763_0 Belongs to the class-I aminoacyl-tRNA synthetase family K01883 GO:0000166,GO:0003674,GO:0003824,GO:0004812,GO:0004817,GO:0005488,GO:0005524,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006082,GO:0006139,GO:0006399,GO:0006412,GO:0006418,GO:0006423,GO:0006518,GO:0006520,GO:0006725,GO:0006807,GO:0008144,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0016070,GO:0016874,GO:0016875,GO:0017076,GO:0019538,GO:0019752,GO:0030554,GO:0032553,GO:0032555,GO:0032559,GO:0034641,GO:0034645,GO:0034660,GO:0035639,GO:0036094,GO:0043038,GO:0043039,GO:0043043,GO:0043167,GO:0043168,GO:0043170,GO:0043436,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044281,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0071704,GO:0090304,GO:0097159,GO:0097367,GO:0140098,GO:0140101,GO:1901265,GO:1901360,GO:1901363,GO:1901564,GO:1901566,GO:1901576 6.1.1.16 3.142e-305 938.0
DYD1_k127_909763_1 C-terminal domain of CHU protein family - - - 1.603e-301 933.0
DYD1_k127_909763_2 Outer membrane protein transport protein, Ompp1 FadL TodX - - - 3.716e-277 857.0
DYD1_k127_909763_3 C-terminal domain of CHU protein family - - - 3.199e-266 824.0
DYD1_k127_909763_4 gtp cyclohydrolase K01495 - 3.5.4.16 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001271 439.0
DYD1_k127_909763_5 AraC-type transcriptional regulator N-terminus - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000005659 284.0
DYD1_k127_909763_6 - - - - 0.00000000000000000000000000000000000000000000008413 175.0
DYD1_k127_911656_0 Glycosyl hydrolase family 65, N-terminal domain K15923 - 3.2.1.51 2.579e-257 800.0
DYD1_k127_911656_1 Alpha-L-fucosidase K01206 - 3.2.1.51 3.255e-244 759.0
DYD1_k127_911656_2 alpha-L-fucosidase K01206 - 3.2.1.51 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008392 353.0
DYD1_k127_918094_0 and their inactivated homologs K03568 - - 0.0 1050.0
DYD1_k127_918094_1 Putative modulator of DNA gyrase K03592 - - 6.925e-254 786.0
DYD1_k127_918094_2 Catalyzes the reversible phosphatidyl group transfer from one phosphatidylglycerol molecule to another to form cardiolipin (CL) (diphosphatidylglycerol) and glycerol K06131 - - 2.279e-244 761.0
DYD1_k127_918094_3 associated with various cellular activities K03924 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001213 592.0
DYD1_k127_918094_4 D-isomer specific 2-hydroxyacid dehydrogenase K03778 - 1.1.1.28 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008807 540.0
DYD1_k127_918094_5 Domain of unknown function (DUF4159) - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000171 440.0
DYD1_k127_918094_6 PFAM Universal stress protein family - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001388 413.0
DYD1_k127_918094_7 Universal stress protein - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000336 406.0
DYD1_k127_918094_8 Universal stress protein - - - 0.00000000000000000000000000000000000000000000000005053 179.0
DYD1_k127_926150_0 Transporter K02005 - - 1.407e-238 741.0
DYD1_k127_926150_1 abc transporter (atp-binding protein) K02003 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001271 439.0
DYD1_k127_926150_2 Outer membrane efflux protein K12340 - - 0.0000000000000000000000000000000000000000000000000000000000003644 212.0
DYD1_k127_926150_3 COG0577 ABC-type antimicrobial peptide transport system permease component K02004 - - 0.00000000000000000118 87.0
DYD1_k127_930446_0 PFAM RNA polymerase sigma-70 region 2 K03088 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001078 471.0
DYD1_k127_930446_1 Transcriptional regulator containing an amidase domain and an AraC-type DNA-binding HTH domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006869 403.0
DYD1_k127_930446_2 Cation efflux family - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001626 349.0
DYD1_k127_930446_3 YCII-related domain - - - 0.00000000000000000000000000000000000000000007595 162.0
DYD1_k127_930446_4 Two component regulator propeller - - - 0.00000000000000000000000000000000000003308 149.0
DYD1_k127_930446_5 - - - - 0.000000000000000000000000000000000453 136.0
DYD1_k127_930446_6 Two component regulator propeller - - - 0.00000000000000000000005791 99.0
DYD1_k127_958084_0 Belongs to the DEAD box helicase family K05592 - 3.6.4.13 0.0 1050.0
DYD1_k127_958084_1 Alpha-amylase domain K01176 - 3.2.1.1 0.0 1049.0
DYD1_k127_958084_10 translation initiation factor activity K06996 - - 0.00000000000000000000000000000000000000000000000009421 181.0
DYD1_k127_958084_11 Haem-binding domain - - - 0.00000000000000000000000000000000000000002758 157.0
DYD1_k127_958084_2 Na( ) H( ) antiporter that extrudes sodium in exchange for external protons K03313 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004041 596.0
DYD1_k127_958084_3 D-isomer specific 2-hydroxyacid dehydrogenase K00058 - 1.1.1.399,1.1.1.95 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001276 552.0
DYD1_k127_958084_4 CarboxypepD_reg-like domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002006 457.0
DYD1_k127_958084_5 NAD-dependent lysine deacetylase and desuccinylase that specifically removes acetyl and succinyl groups on target proteins. Modulates the activities of several proteins which are inactive in their acylated form K12410 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002268 400.0
DYD1_k127_958084_6 Catalyzes the 2'-O methylation of guanosine at position 18 in tRNA K00556 - 2.1.1.34 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003229 356.0
DYD1_k127_958084_7 Pyrophosphatase that catalyzes the hydrolysis of nucleoside triphosphates to their monophosphate derivatives, with a high preference for the non-canonical purine nucleotides XTP (xanthosine triphosphate), dITP (deoxyinosine triphosphate) and ITP. Seems to function as a house-cleaning enzyme that removes non-canonical purine nucleotides from the nucleotide pool, thus preventing their incorporation into DNA RNA and avoiding chromosomal lesions K02428 GO:0003674,GO:0003824,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006139,GO:0006725,GO:0006753,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0009056,GO:0009058,GO:0009141,GO:0009143,GO:0009987,GO:0016462,GO:0016787,GO:0016817,GO:0016818,GO:0018130,GO:0019438,GO:0019439,GO:0019637,GO:0034404,GO:0034641,GO:0034654,GO:0034655,GO:0044237,GO:0044238,GO:0044248,GO:0044249,GO:0044270,GO:0044271,GO:0044281,GO:0044283,GO:0044424,GO:0044444,GO:0044464,GO:0046434,GO:0046483,GO:0046700,GO:0047429,GO:0055086,GO:0071704,GO:1901292,GO:1901360,GO:1901361,GO:1901362,GO:1901575,GO:1901576 3.6.1.66 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005037 317.0
DYD1_k127_958084_8 Polyketide cyclase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000004931 284.0
DYD1_k127_958084_9 Isoprenylcysteine carboxyl methyltransferase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000001325 246.0
DYD1_k127_965398_0 ABC transporter - - - 0.0 1011.0
DYD1_k127_965398_1 Biotin attachment protein - - - 0.00000000000000000000000000000000000000000000000000005232 187.0
DYD1_k127_965398_2 Bacterial regulatory proteins, tetR family - - - 0.00000000001268 65.0
DYD1_k127_98270_0 Domain of unknown function (DUF5117) - - - 0.0 1409.0
DYD1_k127_98270_1 Circularly permuted ATP-grasp type 2 - - - 1.414e-253 783.0
DYD1_k127_98270_2 Threonine aldolase K01620 - 4.1.2.48 3.12e-200 625.0
DYD1_k127_98270_3 Binds to DNA and alters its conformation. May be involved in regulation of gene expression, nucleoid organization and DNA protection K09747 - - 0.000000000000000000000000000000000000000000008886 163.0