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Overview

ID MAG00876
Name DYD1_bin.62
Sample SMP0025
Taxonomy
Kingdom Bacteria
Phylum Pseudomonadota
Class Gammaproteobacteria
Order Xanthomonadales
Family SZUA-36
Genus JAUIBE01
Species
Assembly information
Completeness (%) 94.41
Contamination (%) 0.42
GC content (%) 64.0
N50 (bp) 12,080
Genome size (bp) 2,788,150

Location

Module

Module ID Module name Total genes Total steps Contain genes Contain steps Percentage of genes Percentage of steps

Genes2502

Gene name Description KEGG GOs EC E-value Score Sequence
DYD1_k127_1000197_0 Required for accurate and efficient protein synthesis under certain stress conditions. May act as a fidelity factor of the translation reaction, by catalyzing a one-codon backward translocation of tRNAs on improperly translocated ribosomes. Back- translocation proceeds from a post-translocation (POST) complex to a pre-translocation (PRE) complex, thus giving elongation factor G a second chance to translocate the tRNAs correctly. Binds to ribosomes in a GTP-dependent manner K03596 - - 5.052e-291 903.0
DYD1_k127_1000197_1 belongs to the aldehyde dehydrogenase family K00128 - 1.2.1.3 1.33e-226 712.0
DYD1_k127_1000197_10 Catalyzes the complicated ring closure reaction between the two acyclic compounds 1-deoxy-D-xylulose-5-phosphate (DXP) and 3-amino-2-oxopropyl phosphate (1-amino-acetone-3-phosphate or AAP) to form pyridoxine 5'-phosphate (PNP) and inorganic phosphate K03474 - 2.6.99.2 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002671 310.0
DYD1_k127_1000197_11 Cell wall formation K00075 - 1.3.1.98 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000001593 311.0
DYD1_k127_1000197_12 Plays a role in peptidoglycan recycling by cleaving the terminal beta-1,4-linked N-acetylglucosamine (GlcNAc) from peptide-linked peptidoglycan fragments, giving rise to free GlcNAc, anhydro-N-acetylmuramic acid and anhydro-N-acetylmuramic acid-linked peptides K01207 GO:0000270,GO:0003674,GO:0003824,GO:0004553,GO:0004563,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006022,GO:0006807,GO:0008150,GO:0008152,GO:0009254,GO:0009273,GO:0009987,GO:0015929,GO:0016787,GO:0016798,GO:0030203,GO:0042546,GO:0043170,GO:0044085,GO:0044424,GO:0044444,GO:0044464,GO:0071554,GO:0071704,GO:0071840,GO:1901135,GO:1901564 3.2.1.52 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000002424 294.0
DYD1_k127_1000197_13 Belongs to the peptidase S26 family K03100 GO:0005575,GO:0005623,GO:0005886,GO:0016020,GO:0044464,GO:0071944 3.4.21.89 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000002847 284.0
DYD1_k127_1000197_14 Protein conserved in bacteria - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000006363 295.0
DYD1_k127_1000197_15 Belongs to the sigma-70 factor family. ECF subfamily K03088 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000001193 274.0
DYD1_k127_1000197_16 Catalyzes the reversible phosphorylation of S-methyl-5'- thioinosine (MTI) to hypoxanthine and 5-methylthioribose-1- phosphate. Involved in the breakdown of S-methyl-5'-thioadenosine (MTA), a major by-product of polyamine biosynthesis. Catabolism of (MTA) occurs via deamination to MTI and phosphorolysis to hypoxanthine K19696 - 2.4.2.44 0.00000000000000000000000000000000000000000000000000000000000000000000001444 250.0
DYD1_k127_1000197_17 Digests double-stranded RNA. Involved in the processing of primary rRNA transcript to yield the immediate precursors to the large and small rRNAs (23S and 16S). Processes some mRNAs, and tRNAs when they are encoded in the rRNA operon. Processes pre- crRNA and tracrRNA of type II CRISPR loci if present in the organism K03685 GO:0003674,GO:0003676,GO:0003723,GO:0003725,GO:0003824,GO:0004518,GO:0004519,GO:0004521,GO:0004525,GO:0004540,GO:0005488,GO:0006139,GO:0006396,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0009987,GO:0010467,GO:0016070,GO:0016787,GO:0016788,GO:0016891,GO:0016893,GO:0032296,GO:0034641,GO:0043170,GO:0044237,GO:0044238,GO:0046483,GO:0071704,GO:0090304,GO:0090305,GO:0090501,GO:0090502,GO:0097159,GO:0140098,GO:1901360,GO:1901363 3.1.26.3 0.0000000000000000000000000000000000000000000000000000000000005637 224.0
DYD1_k127_1000197_18 Involved in DNA repair and RecF pathway recombination K03584 - - 0.0000000000000000000000000000000000000000000000000000005929 200.0
DYD1_k127_1000197_19 Protein of unknown function (DUF1318) - - - 0.000000000000000000000000000000000000000000000000001537 189.0
DYD1_k127_1000197_2 Acyl-CoA dehydrogenase K00252 - 1.3.8.6 1.467e-202 635.0
DYD1_k127_1000197_20 MucB/RseB C-terminal domain K03598 GO:0003674,GO:0005488,GO:0005515,GO:0005575,GO:0005623,GO:0030288,GO:0030313,GO:0031975,GO:0042597,GO:0042802,GO:0044464,GO:0045152 - 0.0000000000000000000000000000000000000000000005215 181.0
DYD1_k127_1000197_21 Catalyzes the salvage synthesis of inosine-5'-monophosphate (IMP) and guanosine-5'-monophosphate (GMP) from the purine bases hypoxanthine and guanine, respectively K00760 - 2.4.2.8 0.00000000000000000000000000000000000001851 150.0
DYD1_k127_1000197_22 Domain of unknown function (DUF4845) - - - 0.000000000000000000000002342 106.0
DYD1_k127_1000197_23 Phosphotransferase enzyme family - - - 0.000000000000000001356 100.0
DYD1_k127_1000197_25 Negative regulator of sigma E activity - - - 0.0000000000104 74.0
DYD1_k127_1000197_26 PFAM Positive regulator of sigma(E) RseC MucC K03803 - - 0.000000001518 66.0
DYD1_k127_1000197_3 glutamate dehydrogenase K15371 - 1.4.1.2 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009462 601.0
DYD1_k127_1000197_4 Belongs to the peptidase S1C family K04771 GO:0003674,GO:0003824,GO:0004175,GO:0004252,GO:0005575,GO:0005623,GO:0006508,GO:0006807,GO:0008150,GO:0008152,GO:0008233,GO:0008236,GO:0016787,GO:0017171,GO:0019538,GO:0030288,GO:0030313,GO:0031975,GO:0042597,GO:0043170,GO:0044238,GO:0044464,GO:0070011,GO:0071704,GO:0140096,GO:1901564 3.4.21.107 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001162 428.0
DYD1_k127_1000197_5 Catalyzes the formation of 5-methyl-uridine at position 1939 (m5U1939) in 23S rRNA K03215 - 2.1.1.190 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001071 419.0
DYD1_k127_1000197_6 Catalyzes the conversion of dihydroorotate to orotate with quinone as electron acceptor K00254 - 1.3.5.2 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005802 402.0
DYD1_k127_1000197_7 5'-nucleotidase K01081 - 3.1.3.5 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002696 391.0
DYD1_k127_1000197_8 Involved in the regulation of the intracellular balance of NAD and NADP, and is a key enzyme in the biosynthesis of NADP. Catalyzes specifically the phosphorylation on 2'-hydroxyl of the adenosine moiety of NAD to yield NADP K00858 - 2.7.1.23 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002226 331.0
DYD1_k127_1000197_9 An essential GTPase that binds both GDP and GTP, with rapid nucleotide exchange. Plays a role in 16S rRNA processing and 30S ribosomal subunit biogenesis and possibly also in cell cycle regulation and energy metabolism K03595 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001378 325.0
DYD1_k127_1023729_0 COG0457 FOG TPR repeat - - - 4.869e-239 764.0
DYD1_k127_1023729_1 FtsX-like permease family K02004 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004164 614.0
DYD1_k127_1023729_10 Methylenetetrahydrofolate reductase - - - 0.0000000000000000000000000000000000000000000000000000000000004277 222.0
DYD1_k127_1023729_12 transcriptional regulator K06995 - - 0.00000000000000000000000000000000000007659 145.0
DYD1_k127_1023729_2 TonB dependent receptor - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000274 600.0
DYD1_k127_1023729_3 Alpha beta hydrolase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004659 494.0
DYD1_k127_1023729_4 Belongs to the pirin family K06911 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003206 443.0
DYD1_k127_1023729_5 Lipocalin-like domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001002 364.0
DYD1_k127_1023729_6 Aspartyl/Asparaginyl beta-hydroxylase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000001444 266.0
DYD1_k127_1023729_7 - - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000004135 269.0
DYD1_k127_1023729_8 (ABC) transporter K02003 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000001401 258.0
DYD1_k127_1023729_9 K COG5665 CCR4-NOT transcriptional regulation complex, NOT5 subunit - - - 0.000000000000000000000000000000000000000000000000000000000000000000000001614 250.0
DYD1_k127_1028197_0 Produces ATP from ADP in the presence of a proton gradient across the membrane. The alpha chain is a regulatory subunit K02111 - 3.6.3.14 3.209e-285 881.0
DYD1_k127_1028197_1 Produces ATP from ADP in the presence of a proton gradient across the membrane. The catalytic sites are hosted primarily by the beta subunits K02112 - 3.6.3.14 7.962e-274 845.0
DYD1_k127_1028197_10 Component of the F(0) channel, it forms part of the peripheral stalk, linking F(1) to F(0) K02109 - - 0.0000000000000000000000000000000000000002203 154.0
DYD1_k127_1028197_11 signal transduction histidine kinase - - - 0.0000000000000000000000000000000000000004441 166.0
DYD1_k127_1028197_12 F(1)F(0) ATP synthase produces ATP from ADP in the presence of a proton or sodium gradient. F-type ATPases consist of two structural domains, F(1) containing the extramembraneous catalytic core and F(0) containing the membrane proton channel, linked together by a central stalk and a peripheral stalk. During catalysis, ATP synthesis in the catalytic domain of F(1) is coupled via a rotary mechanism of the central stalk subunits to proton translocation K02110 - - 0.000000000000000000000000000000000000605 140.0
DYD1_k127_1028197_13 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase - - - 0.000000000000000000000000000000215 142.0
DYD1_k127_1028197_14 Two component, sigma54 specific, transcriptional regulator, Fis family - - - 0.0000000000000000000000002274 116.0
DYD1_k127_1028197_15 cheY-homologous receiver domain - - - 0.000000000000000000007476 100.0
DYD1_k127_1028197_16 PAS fold - - - 0.0000003124 58.0
DYD1_k127_1028197_17 ATP synthase K02116 - - 0.000009166 53.0
DYD1_k127_1028197_2 Produces ATP from ADP in the presence of a proton gradient across the membrane. The gamma chain is believed to be important in regulating ATPase activity and the flow of protons through the CF(0) complex K02115 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007864 419.0
DYD1_k127_1028197_3 it plays a direct role in the translocation of protons across the membrane K02108 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002204 368.0
DYD1_k127_1028197_4 Histidine kinase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000005041 296.0
DYD1_k127_1028197_5 helix_turn_helix, Lux Regulon K14979 - - 0.000000000000000000000000000000000000000000000000000000000000000005364 231.0
DYD1_k127_1028197_6 F(1)F(0) ATP synthase produces ATP from ADP in the presence of a proton or sodium gradient. F-type ATPases consist of two structural domains, F(1) containing the extramembraneous catalytic core and F(0) containing the membrane proton channel, linked together by a central stalk and a peripheral stalk. During catalysis, ATP synthesis in the catalytic domain of F(1) is coupled via a rotary mechanism of the central stalk subunits to proton translocation K02113 - - 0.00000000000000000000000000000000000000000000000000005038 193.0
DYD1_k127_1028197_7 cheY-homologous receiver domain - - - 0.0000000000000000000000000000000000000000000000000002298 190.0
DYD1_k127_1028197_8 Histidine kinase - - - 0.000000000000000000000000000000000000000000000001589 196.0
DYD1_k127_1028197_9 Produces ATP from ADP in the presence of a proton gradient across the membrane K02114 GO:0005575,GO:0005622,GO:0005623,GO:0006139,GO:0006163,GO:0006164,GO:0006725,GO:0006753,GO:0006754,GO:0006793,GO:0006796,GO:0006807,GO:0006810,GO:0006811,GO:0006812,GO:0008150,GO:0008152,GO:0009058,GO:0009117,GO:0009123,GO:0009124,GO:0009126,GO:0009127,GO:0009141,GO:0009142,GO:0009144,GO:0009145,GO:0009150,GO:0009152,GO:0009156,GO:0009161,GO:0009165,GO:0009167,GO:0009168,GO:0009199,GO:0009201,GO:0009205,GO:0009206,GO:0009259,GO:0009260,GO:0009987,GO:0015672,GO:0015985,GO:0015986,GO:0016020,GO:0016469,GO:0017144,GO:0018130,GO:0019438,GO:0019637,GO:0019693,GO:0032991,GO:0033178,GO:0034220,GO:0034641,GO:0034654,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0044424,GO:0044425,GO:0044464,GO:0045259,GO:0045261,GO:0046034,GO:0046390,GO:0046483,GO:0051179,GO:0051234,GO:0055085,GO:0055086,GO:0071704,GO:0072521,GO:0072522,GO:0090407,GO:0098655,GO:0098660,GO:0098662,GO:0098796,GO:1901135,GO:1901137,GO:1901293,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576,GO:1902600 - 0.000000000000000000000000000000000000000000000004068 177.0
DYD1_k127_1034925_0 AMP-binding enzyme C-terminal domain K00666 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001069 493.0
DYD1_k127_1034925_1 Sodium/hydrogen exchanger family - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003007 440.0
DYD1_k127_1034925_2 Metallo-beta-lactamase superfamily - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001415 354.0
DYD1_k127_1034925_3 Prephenate dehydrogenase chorismate mutase K00210 - 1.3.1.12 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000007685 297.0
DYD1_k127_1034925_4 Uracil-DNA glycosylase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000002049 271.0
DYD1_k127_1034925_5 AMP-binding enzyme C-terminal domain K00666 - - 0.000000000267 62.0
DYD1_k127_1034925_6 - - - - 0.0000000009924 64.0
DYD1_k127_1035532_0 TonB dependent receptor - - - 1.006e-226 726.0
DYD1_k127_1035532_1 COG0318 Acyl-CoA synthetases (AMP-forming) AMP-acid ligases II - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002052 553.0
DYD1_k127_1035532_10 Alpha beta K07018 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000003403 267.0
DYD1_k127_1035532_11 transcriptional regulator - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000002042 254.0
DYD1_k127_1035532_12 Alpha/beta hydrolase family - - - 0.0000000000000000000000000000000000000000000000000000000000000000007227 238.0
DYD1_k127_1035532_13 Competence protein - - - 0.0000000000000000000000000000000000000000000000001465 189.0
DYD1_k127_1035532_14 Converts the free carboxyl group of a malonyl-thioester to its methyl ester by transfer of a methyl group from S-adenosyl- L-methionine (SAM). It allows to synthesize pimeloyl-ACP via the fatty acid synthetic pathway K02169 - 2.1.1.197 0.000000000000000000000000000000000000000003183 165.0
DYD1_k127_1035532_15 cytochrome - - - 0.000000000000000000000000000773 119.0
DYD1_k127_1035532_16 Acyl carrier protein phosphodiesterase K08682 GO:0003674,GO:0003824,GO:0006082,GO:0006629,GO:0006631,GO:0006633,GO:0008081,GO:0008150,GO:0008152,GO:0008610,GO:0008770,GO:0009058,GO:0009987,GO:0016053,GO:0016787,GO:0016788,GO:0019752,GO:0032787,GO:0042578,GO:0043436,GO:0044237,GO:0044238,GO:0044249,GO:0044255,GO:0044281,GO:0044283,GO:0046394,GO:0071704,GO:0072330,GO:0140096,GO:1901576 3.1.4.14 0.000000000000000000000000005399 118.0
DYD1_k127_1035532_17 Multidrug Resistance protein K11741 - - 0.00000000000000000000000002192 109.0
DYD1_k127_1035532_19 depolymerase - - - 0.00002691 50.0
DYD1_k127_1035532_2 ABC transporter K01990 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001128 441.0
DYD1_k127_1035532_3 desaturase K00507 - 1.14.19.1 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001407 433.0
DYD1_k127_1035532_4 Reduces the stability of FtsZ polymers in the presence of ATP K06916 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006153 390.0
DYD1_k127_1035532_5 TAP-like protein - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004225 373.0
DYD1_k127_1035532_6 Catalyzes the prenylation of para-hydroxybenzoate (PHB) with an all-trans polyprenyl group. Mediates the second step in the final reaction sequence of ubiquinone-8 (UQ-8) biosynthesis, which is the condensation of the polyisoprenoid side chain with PHB, generating the first membrane-bound Q intermediate 3- octaprenyl-4-hydroxybenzoate K03179 - 2.5.1.39 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000454 328.0
DYD1_k127_1035532_7 Preprotein translocase subunit TatD K03424 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001132 341.0
DYD1_k127_1035532_8 ABC-2 type transporter K01992 GO:0005575,GO:0005623,GO:0005886,GO:0016020,GO:0044464,GO:0071944 - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002493 327.0
DYD1_k127_1035532_9 Nuclease K07004 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000114 318.0
DYD1_k127_1211563_0 Involved in the biosynthesis of the central metabolite phospho-alpha-D-ribosyl-1-pyrophosphate (PRPP) via the transfer of pyrophosphoryl group from ATP to 1-hydroxyl of ribose-5-phosphate (Rib-5-P) K00948 - 2.7.6.1 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005676 461.0
DYD1_k127_1211563_1 ATPase that binds to both the 70S ribosome and the 50S ribosomal subunit in a nucleotide-independent manner K06942 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003635 443.0
DYD1_k127_1211563_2 Catalyzes the NADPH-dependent reduction of glutamyl- tRNA(Glu) to glutamate 1-semialdehyde (GSA) K02492 - 1.2.1.70 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002833 308.0
DYD1_k127_1211563_3 Tetratricopeptide TPR_2 repeat protein - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000002677 289.0
DYD1_k127_1211563_4 Catalyzes the phosphorylation of the position 2 hydroxy group of 4-diphosphocytidyl-2C-methyl-D-erythritol K00919 GO:0003674,GO:0003824,GO:0006793,GO:0006796,GO:0008150,GO:0008152,GO:0009987,GO:0016301,GO:0016310,GO:0016740,GO:0016772,GO:0016773,GO:0044237,GO:0050515 2.7.1.148 0.00000000000000000000000000000000000000000000000000000000000000000000000003507 260.0
DYD1_k127_1211563_5 The natural substrate for this enzyme may be peptidyl- tRNAs which drop off the ribosome during protein synthesis K01056 GO:0003674,GO:0003824,GO:0004045,GO:0016787,GO:0016788,GO:0052689,GO:0140098,GO:0140101 3.1.1.29 0.0000000000000000000000000000000000000000000000000000000000000002279 226.0
DYD1_k127_1211563_6 This is one of the proteins that binds to the 5S RNA in the ribosome where it forms part of the central protuberance K02897 GO:0003674,GO:0003676,GO:0003723,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0006412,GO:0006518,GO:0006807,GO:0008097,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0015934,GO:0019538,GO:0019843,GO:0022625,GO:0022626,GO:0032991,GO:0034641,GO:0034645,GO:0043043,GO:0043170,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:0071704,GO:0097159,GO:1901363,GO:1901564,GO:1901566,GO:1901576,GO:1990904 - 0.0000000000000000000000000000000000000000000000000000000004761 210.0
DYD1_k127_1211563_7 Plays a critical role in the incorporation of lipoproteins in the outer membrane after they are released by the LolA protein K02494 GO:0003674,GO:0005488,GO:0005575,GO:0005623,GO:0006807,GO:0008104,GO:0008150,GO:0008152,GO:0008289,GO:0009279,GO:0010876,GO:0016020,GO:0019538,GO:0019867,GO:0030312,GO:0030313,GO:0031975,GO:0033036,GO:0033218,GO:0034613,GO:0042157,GO:0042277,GO:0043170,GO:0044238,GO:0044462,GO:0044464,GO:0044872,GO:0044873,GO:0044874,GO:0051179,GO:0051641,GO:0051668,GO:0070727,GO:0071704,GO:0071723,GO:0071944,GO:0072657,GO:1901564 - 0.00000000000000000000000000000000007179 141.0
DYD1_k127_121743_0 Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family - - - 0.0 1049.0
DYD1_k127_121743_1 converts acyl-CoA and FAD to FADH2 and delta2-enoyl-CoA K06445 - - 3.3e-322 1005.0
DYD1_k127_121743_10 50S ribosome-binding GTPase K06883 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000001107 292.0
DYD1_k127_121743_11 Accelerates the degradation of transcripts by removing pyrophosphate from the 5'-end of triphosphorylated RNA, leading to a more labile monophosphorylated state that can stimulate subsequent ribonuclease cleavage K08311 GO:0003674,GO:0003824,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006139,GO:0006401,GO:0006402,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0009056,GO:0009057,GO:0009892,GO:0009987,GO:0010468,GO:0010605,GO:0010629,GO:0016070,GO:0016071,GO:0016462,GO:0016787,GO:0016817,GO:0016818,GO:0019222,GO:0019439,GO:0034353,GO:0034641,GO:0034655,GO:0043170,GO:0044237,GO:0044238,GO:0044248,GO:0044260,GO:0044265,GO:0044270,GO:0044424,GO:0044464,GO:0046483,GO:0046700,GO:0048519,GO:0050789,GO:0060255,GO:0065007,GO:0071704,GO:0090304,GO:1901360,GO:1901361,GO:1901575 - 0.0000000000000000000000000000000000000000000000000000000000000000000001178 243.0
DYD1_k127_121743_12 Iron-storage protein K03594 - 1.16.3.1 0.00000000000000000000000000000000000000000000000000000000000000000004014 237.0
DYD1_k127_121743_13 PFAM ABC transporter K02013 - 3.6.3.34 0.000000000000000000000000000000000000000000000000000000000001747 228.0
DYD1_k127_121743_14 Bacterial regulatory proteins, tetR family - - - 0.000000000000000000000000000000000000000000000000000009413 195.0
DYD1_k127_121743_15 Belongs to the sigma-70 factor family. ECF subfamily K03088 - - 0.00000000000000000000000000000000000000000000001292 177.0
DYD1_k127_121743_16 Catalyzes the specific phosphorylation of the 3-hydroxyl group of shikimic acid using ATP as a cosubstrate K00891 GO:0000287,GO:0003674,GO:0003824,GO:0004765,GO:0005488,GO:0006082,GO:0006520,GO:0006725,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0008652,GO:0009058,GO:0009072,GO:0009073,GO:0009987,GO:0016053,GO:0016301,GO:0016310,GO:0016740,GO:0016772,GO:0016773,GO:0019438,GO:0019632,GO:0019752,GO:0032787,GO:0043167,GO:0043169,GO:0043436,GO:0044237,GO:0044238,GO:0044249,GO:0044281,GO:0044283,GO:0046394,GO:0046872,GO:0071704,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576,GO:1901615 2.7.1.71 0.0000000000000000000000000000000000000000000004973 173.0
DYD1_k127_121743_17 Putative adhesin - - - 0.000000000000000000000000000000000000000000001066 182.0
DYD1_k127_121743_18 glyoxalase bleomycin resistance protein dioxygenase - - - 0.000000000000000000000000000000846 122.0
DYD1_k127_121743_19 Transmembrane exosortase (Exosortase_EpsH) - - - 0.00000000000000000000000000001143 120.0
DYD1_k127_121743_2 Catalyzes the conversion of oxaloacetate (OAA) to phosphoenolpyruvate (PEP), the rate-limiting step in the metabolic pathway that produces glucose from lactate and other precursors derived from the citric acid cycle K01596 - 4.1.1.32 3.289e-296 916.0
DYD1_k127_121743_20 COG2906 Bacterioferritin-associated ferredoxin K02192 - - 0.0000000000009499 70.0
DYD1_k127_121743_22 Major Facilitator K03301 - - 0.0001659 47.0
DYD1_k127_121743_3 TonB dependent receptor K16091 - - 2.407e-240 764.0
DYD1_k127_121743_4 Catalyzes the decarboxylation of four acetate groups of uroporphyrinogen-III to yield coproporphyrinogen-III K01599 - 4.1.1.37 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001439 486.0
DYD1_k127_121743_5 Domain of unknown function (DUF697) K06883 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005906 391.0
DYD1_k127_121743_6 Catalyzes the conversion of 3-deoxy-D-arabino- heptulosonate 7-phosphate (DAHP) to dehydroquinate (DHQ) K01735 GO:0000166,GO:0003674,GO:0003824,GO:0003856,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006082,GO:0006520,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0008270,GO:0008652,GO:0009058,GO:0009072,GO:0009073,GO:0009423,GO:0009987,GO:0016053,GO:0016829,GO:0016835,GO:0016838,GO:0019438,GO:0019752,GO:0036094,GO:0043167,GO:0043168,GO:0043169,GO:0043436,GO:0043648,GO:0043650,GO:0044237,GO:0044238,GO:0044249,GO:0044281,GO:0044283,GO:0044424,GO:0044464,GO:0046394,GO:0046417,GO:0046872,GO:0046914,GO:0048037,GO:0050662,GO:0051287,GO:0070403,GO:0071704,GO:0097159,GO:1901265,GO:1901360,GO:1901362,GO:1901363,GO:1901564,GO:1901566,GO:1901576 4.2.3.4 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000574 352.0
DYD1_k127_121743_7 Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002071 321.0
DYD1_k127_121743_8 Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily K02015 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003384 316.0
DYD1_k127_121743_9 FeS assembly SUF system protein SufT - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000007342 281.0
DYD1_k127_1233018_0 COG1233 Phytoene dehydrogenase and related proteins - - - 4.552e-245 767.0
DYD1_k127_1233018_1 Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family K01845 - 5.4.3.8 3.093e-204 645.0
DYD1_k127_1233018_2 Acyl-CoA dehydrogenase, C-terminal domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002202 496.0
DYD1_k127_1233018_3 COG1233 Phytoene dehydrogenase and related proteins K10027,K10210 - 1.14.99.44,1.3.99.26,1.3.99.28,1.3.99.29,1.3.99.31 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001287 498.0
DYD1_k127_1233018_4 Part of the ABC transporter complex PotABCD involved in spermidine putrescine import. Responsible for energy coupling to the transport system K11076 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001108 463.0
DYD1_k127_1233018_5 Required for the activity of the bacterial periplasmic transport system of putrescine K11073 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001966 429.0
DYD1_k127_1233018_6 BetI-type transcriptional repressor, C-terminal - - - 0.000000000000000000000000000000000000000000000000000000002441 207.0
DYD1_k127_1233018_7 The glycine cleavage system catalyzes the degradation of glycine K00605 - 2.1.2.10 0.00000000000000000000005642 101.0
DYD1_k127_1235178_0 Produces ATP from ADP in the presence of a proton gradient across the membrane. The alpha chain is a regulatory subunit K02111 - 3.6.3.14 3.683e-257 800.0
DYD1_k127_1235178_1 glutamate--cysteine ligase K01919 - 6.3.2.2 1.572e-206 650.0
DYD1_k127_1235178_10 Belongs to the ParB family K03497 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000001119 301.0
DYD1_k127_1235178_11 Specifically methylates the N7 position of guanine in position 527 of 16S rRNA K03501 GO:0000154,GO:0001510,GO:0003674,GO:0003824,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006139,GO:0006364,GO:0006396,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0008168,GO:0008170,GO:0008173,GO:0008649,GO:0008757,GO:0009451,GO:0009987,GO:0010467,GO:0016070,GO:0016072,GO:0016435,GO:0016740,GO:0016741,GO:0022613,GO:0031167,GO:0032259,GO:0034470,GO:0034641,GO:0034660,GO:0036265,GO:0042254,GO:0043170,GO:0043412,GO:0043414,GO:0044085,GO:0044237,GO:0044238,GO:0044260,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0070043,GO:0070475,GO:0070476,GO:0071704,GO:0071840,GO:0090304,GO:0140098,GO:0140102,GO:1901360 2.1.1.170 0.000000000000000000000000000000000000000000000000000002059 201.0
DYD1_k127_1235178_12 Produces ATP from ADP in the presence of a proton gradient across the membrane. The gamma chain is believed to be important in regulating ATPase activity and the flow of protons through the CF(0) complex K02115 - - 0.000000000000000000000000000000000000000000000000009123 185.0
DYD1_k127_1235178_13 Component of the F(0) channel, it forms part of the peripheral stalk, linking F(1) to F(0) K02109 GO:0003674,GO:0003824,GO:0005215,GO:0005575,GO:0005622,GO:0005623,GO:0005886,GO:0006139,GO:0006163,GO:0006164,GO:0006725,GO:0006753,GO:0006754,GO:0006793,GO:0006796,GO:0006807,GO:0006810,GO:0006811,GO:0006812,GO:0008150,GO:0008152,GO:0008324,GO:0009058,GO:0009117,GO:0009123,GO:0009124,GO:0009126,GO:0009127,GO:0009141,GO:0009142,GO:0009144,GO:0009145,GO:0009150,GO:0009152,GO:0009156,GO:0009161,GO:0009165,GO:0009167,GO:0009168,GO:0009199,GO:0009201,GO:0009205,GO:0009206,GO:0009259,GO:0009260,GO:0009987,GO:0015075,GO:0015077,GO:0015078,GO:0015318,GO:0015399,GO:0015405,GO:0015672,GO:0015985,GO:0015986,GO:0016020,GO:0016462,GO:0016469,GO:0016787,GO:0016817,GO:0016818,GO:0016887,GO:0017111,GO:0017144,GO:0018130,GO:0019438,GO:0019637,GO:0019693,GO:0019829,GO:0022804,GO:0022853,GO:0022857,GO:0022890,GO:0031224,GO:0031225,GO:0032991,GO:0033177,GO:0034220,GO:0034641,GO:0034654,GO:0036442,GO:0042623,GO:0042625,GO:0042626,GO:0043492,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0044424,GO:0044425,GO:0044459,GO:0044464,GO:0044769,GO:0045259,GO:0045260,GO:0045263,GO:0045264,GO:0046034,GO:0046390,GO:0046483,GO:0046933,GO:0046961,GO:0051179,GO:0051234,GO:0055085,GO:0055086,GO:0071704,GO:0071944,GO:0072521,GO:0072522,GO:0090407,GO:0090662,GO:0098655,GO:0098660,GO:0098662,GO:0098796,GO:0098797,GO:0099131,GO:0099132,GO:1901135,GO:1901137,GO:1901293,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576,GO:1902600 - 0.00000000000000000000000000000000000000007202 155.0
DYD1_k127_1235178_14 F(1)F(0) ATP synthase produces ATP from ADP in the presence of a proton or sodium gradient. F-type ATPases consist of two structural domains, F(1) containing the extramembraneous catalytic core and F(0) containing the membrane proton channel, linked together by a central stalk and a peripheral stalk. During catalysis, ATP synthesis in the catalytic domain of F(1) is coupled via a rotary mechanism of the central stalk subunits to proton translocation K02113 GO:0003674,GO:0003824,GO:0005215,GO:0005575,GO:0005622,GO:0005623,GO:0005886,GO:0006139,GO:0006163,GO:0006164,GO:0006725,GO:0006753,GO:0006754,GO:0006793,GO:0006796,GO:0006807,GO:0006810,GO:0006811,GO:0006812,GO:0008150,GO:0008152,GO:0008324,GO:0009058,GO:0009117,GO:0009123,GO:0009124,GO:0009126,GO:0009127,GO:0009141,GO:0009142,GO:0009144,GO:0009145,GO:0009150,GO:0009152,GO:0009156,GO:0009161,GO:0009165,GO:0009167,GO:0009168,GO:0009199,GO:0009201,GO:0009205,GO:0009206,GO:0009259,GO:0009260,GO:0009987,GO:0015075,GO:0015077,GO:0015078,GO:0015318,GO:0015399,GO:0015405,GO:0015672,GO:0015985,GO:0015986,GO:0016020,GO:0016462,GO:0016469,GO:0016787,GO:0016817,GO:0016818,GO:0016887,GO:0017111,GO:0017144,GO:0018130,GO:0019438,GO:0019637,GO:0019693,GO:0019829,GO:0022804,GO:0022853,GO:0022857,GO:0022890,GO:0032991,GO:0033178,GO:0034220,GO:0034641,GO:0034654,GO:0036442,GO:0042623,GO:0042625,GO:0042626,GO:0043492,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0044424,GO:0044425,GO:0044459,GO:0044464,GO:0044769,GO:0045259,GO:0045260,GO:0045261,GO:0045262,GO:0046034,GO:0046390,GO:0046483,GO:0046933,GO:0046961,GO:0051179,GO:0051234,GO:0055085,GO:0055086,GO:0071704,GO:0071944,GO:0072521,GO:0072522,GO:0090407,GO:0090662,GO:0098655,GO:0098660,GO:0098662,GO:0098796,GO:0098797,GO:0099131,GO:0099132,GO:1901135,GO:1901137,GO:1901293,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576,GO:1902600 - 0.00000000000000000000000000000000000003088 150.0
DYD1_k127_1235178_15 F(1)F(0) ATP synthase produces ATP from ADP in the presence of a proton or sodium gradient. F-type ATPases consist of two structural domains, F(1) containing the extramembraneous catalytic core and F(0) containing the membrane proton channel, linked together by a central stalk and a peripheral stalk. During catalysis, ATP synthesis in the catalytic domain of F(1) is coupled via a rotary mechanism of the central stalk subunits to proton translocation K02110 GO:0003674,GO:0003824,GO:0005215,GO:0005575,GO:0005622,GO:0005623,GO:0005886,GO:0006139,GO:0006163,GO:0006164,GO:0006725,GO:0006753,GO:0006754,GO:0006793,GO:0006796,GO:0006807,GO:0006810,GO:0006811,GO:0006812,GO:0008150,GO:0008152,GO:0008324,GO:0009058,GO:0009117,GO:0009123,GO:0009124,GO:0009126,GO:0009127,GO:0009141,GO:0009142,GO:0009144,GO:0009145,GO:0009150,GO:0009152,GO:0009156,GO:0009161,GO:0009165,GO:0009167,GO:0009168,GO:0009199,GO:0009201,GO:0009205,GO:0009206,GO:0009259,GO:0009260,GO:0009987,GO:0015075,GO:0015077,GO:0015078,GO:0015318,GO:0015399,GO:0015405,GO:0015672,GO:0015985,GO:0015986,GO:0016020,GO:0016462,GO:0016469,GO:0016787,GO:0016817,GO:0016818,GO:0016887,GO:0017111,GO:0017144,GO:0018130,GO:0019438,GO:0019637,GO:0019693,GO:0019829,GO:0022804,GO:0022853,GO:0022857,GO:0022890,GO:0032991,GO:0033177,GO:0034220,GO:0034641,GO:0034654,GO:0042623,GO:0042625,GO:0042626,GO:0043492,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0044424,GO:0044425,GO:0044459,GO:0044464,GO:0044769,GO:0045259,GO:0045260,GO:0045263,GO:0045264,GO:0046034,GO:0046390,GO:0046483,GO:0046933,GO:0051179,GO:0051234,GO:0055085,GO:0055086,GO:0071704,GO:0071944,GO:0072521,GO:0072522,GO:0090407,GO:0090662,GO:0098655,GO:0098660,GO:0098662,GO:0098796,GO:0098797,GO:0099131,GO:0099132,GO:1901135,GO:1901137,GO:1901293,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576,GO:1902600 - 0.00000000000000000000000000000002996 127.0
DYD1_k127_1235178_16 - - - - 0.0000009088 59.0
DYD1_k127_1235178_2 ABC-type oligopeptide transport system periplasmic component K02035,K15580 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008135 557.0
DYD1_k127_1235178_3 Bacterial extracellular solute-binding proteins, family 5 Middle K15580 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000155 456.0
DYD1_k127_1235178_4 transporter, permease K02033,K15581 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006096 404.0
DYD1_k127_1235178_5 Belongs to the ABC transporter superfamily K02032,K10823 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006519 409.0
DYD1_k127_1235178_6 Binding-protein-dependent transport system inner membrane component K02034,K15582 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001296 385.0
DYD1_k127_1235178_7 it plays a direct role in the translocation of protons across the membrane K02108 GO:0003674,GO:0003824,GO:0005215,GO:0005575,GO:0005622,GO:0005623,GO:0005886,GO:0005887,GO:0006139,GO:0006163,GO:0006164,GO:0006725,GO:0006753,GO:0006754,GO:0006793,GO:0006796,GO:0006807,GO:0006810,GO:0006811,GO:0006812,GO:0008150,GO:0008152,GO:0008324,GO:0009058,GO:0009117,GO:0009123,GO:0009124,GO:0009126,GO:0009127,GO:0009141,GO:0009142,GO:0009144,GO:0009145,GO:0009150,GO:0009152,GO:0009156,GO:0009161,GO:0009165,GO:0009167,GO:0009168,GO:0009199,GO:0009201,GO:0009205,GO:0009206,GO:0009259,GO:0009260,GO:0009987,GO:0015075,GO:0015077,GO:0015078,GO:0015318,GO:0015399,GO:0015405,GO:0015672,GO:0015985,GO:0015986,GO:0016020,GO:0016021,GO:0016462,GO:0016469,GO:0016787,GO:0016817,GO:0016818,GO:0016887,GO:0017111,GO:0017144,GO:0018130,GO:0019438,GO:0019637,GO:0019693,GO:0019829,GO:0022804,GO:0022853,GO:0022857,GO:0022890,GO:0031224,GO:0031226,GO:0032991,GO:0033177,GO:0034220,GO:0034641,GO:0034654,GO:0042623,GO:0042625,GO:0042626,GO:0042777,GO:0043492,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0044424,GO:0044425,GO:0044459,GO:0044464,GO:0044769,GO:0045259,GO:0045260,GO:0045263,GO:0045264,GO:0046034,GO:0046390,GO:0046483,GO:0046933,GO:0051179,GO:0051234,GO:0055085,GO:0055086,GO:0071704,GO:0071944,GO:0072521,GO:0072522,GO:0090407,GO:0090662,GO:0098655,GO:0098660,GO:0098662,GO:0098796,GO:0098797,GO:0099131,GO:0099132,GO:1901135,GO:1901137,GO:1901293,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576,GO:1902600 - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000468 381.0
DYD1_k127_1235178_8 Belongs to the ABC transporter superfamily K12371,K15583 GO:0000166,GO:0003674,GO:0005488,GO:0005524,GO:0005575,GO:0005623,GO:0005886,GO:0008144,GO:0016020,GO:0017076,GO:0030554,GO:0032553,GO:0032555,GO:0032559,GO:0035639,GO:0036094,GO:0043167,GO:0043168,GO:0044464,GO:0071944,GO:0097159,GO:0097367,GO:1901265,GO:1901363 - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000341 373.0
DYD1_k127_1235178_9 PFAM Cobyrinic acid a,c-diamide synthase K03496 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008072 328.0
DYD1_k127_1236870_0 Phospholipase D. Active site motifs. K06132 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004591 487.0
DYD1_k127_1236870_1 Fatty acid desaturase K10255 - 1.14.19.23,1.14.19.45 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002165 433.0
DYD1_k127_1236870_2 AI-2E family transporter - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003009 406.0
DYD1_k127_1236870_3 Helix-turn-helix XRE-family like proteins - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005359 357.0
DYD1_k127_1236870_4 Phospholipase D. Active site motifs. K06132 - - 0.0000000000000000000000000000000000000000000000000000002064 197.0
DYD1_k127_1236870_5 Cyclic nucleotide-monophosphate binding domain - - - 0.00000000000000000000000000001352 118.0
DYD1_k127_1236870_6 PFAM Cyclic nucleotide-binding - - - 0.00000000000000000000000000003791 117.0
DYD1_k127_1236870_7 - - - - 0.0000000000000000000000000004019 117.0
DYD1_k127_1236870_8 bacterial OsmY and nodulation domain K04065 - - 0.000000000000000000000006794 112.0
DYD1_k127_1236870_9 Domain of unknown function (DUF4398) - - - 0.0000000000000000001047 93.0
DYD1_k127_1262450_0 PFAM TPR repeat-containing protein - - - 0.00000000000000000000000000000000000000000000000000000000000000000002089 263.0
DYD1_k127_1262450_3 Putative zinc-finger - - - 0.0005702 50.0
DYD1_k127_1282871_0 K COG5665 CCR4-NOT transcriptional regulation complex, NOT5 subunit - - - 0.0 1283.0
DYD1_k127_1282871_1 Aldehyde dehydrogenase family - - - 0.0 1047.0
DYD1_k127_1282871_10 TRAP transporter T-component - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000008653 270.0
DYD1_k127_1282871_11 the 2 termini fold to resemble tRNA(Ala) and it encodes a tag peptide , a short internal open reading frame. During trans-translation Ala- aminoacylated tmRNA acts like a tRNA, entering the A-site of stalled ribosomes, displacing the stalled mRNA. The ribosome then switches to translate the ORF on the tmRNA K03664 - - 0.00000000000000000000000000000000000000000000000000000000000002441 218.0
DYD1_k127_1282871_12 - - - - 0.000000000000000000000000000000000000000000000000126 189.0
DYD1_k127_1282871_13 LAGLIDADG-like domain - - - 0.0000000000000000000000000000000000000000000001677 171.0
DYD1_k127_1282871_14 arylsulfatase activity K01133 - 3.1.6.6 0.00000000000000000000000000000000000000000006793 177.0
DYD1_k127_1282871_15 BAAT / Acyl-CoA thioester hydrolase C terminal K06889 - - 0.0000000000000000000000000000000000000003428 166.0
DYD1_k127_1282871_16 TIGRFAM M6 family metalloprotease domain - - - 0.000000000000000000000000000000000000009545 166.0
DYD1_k127_1282871_17 oligoketide cyclase lipid transport protein - GO:0003674,GO:0005488,GO:0006417,GO:0006446,GO:0008150,GO:0009889,GO:0009890,GO:0009892,GO:0010468,GO:0010556,GO:0010558,GO:0010605,GO:0010608,GO:0010629,GO:0017148,GO:0019222,GO:0031323,GO:0031324,GO:0031326,GO:0031327,GO:0032268,GO:0032269,GO:0034248,GO:0034249,GO:0043021,GO:0043023,GO:0044877,GO:0045947,GO:0048519,GO:0048523,GO:0050789,GO:0050794,GO:0051171,GO:0051172,GO:0051246,GO:0051248,GO:0060255,GO:0065007,GO:0080090,GO:2000112,GO:2000113 - 0.000000000000000000000000000000000001846 143.0
DYD1_k127_1282871_18 Tripartite ATP-independent periplasmic transporters, DctQ component - - - 0.000000000000000000000000000001402 126.0
DYD1_k127_1282871_19 RnfH family Ubiquitin K09801 - - 0.00000000000000001955 86.0
DYD1_k127_1282871_2 Type I phosphodiesterase / nucleotide pyrophosphatase - - - 2.341e-223 711.0
DYD1_k127_1282871_21 - - - - 0.0000000001425 65.0
DYD1_k127_1282871_3 Tripartite ATP-independent periplasmic transporter, DctM component - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006333 534.0
DYD1_k127_1282871_4 deoxyribose-phosphate aldolase activity K01619 - 4.1.2.4 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002857 447.0
DYD1_k127_1282871_5 Belongs to the sodium solute symporter (SSF) (TC 2.A.21) family - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001842 425.0
DYD1_k127_1282871_6 Sulfotransferase family - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001341 351.0
DYD1_k127_1282871_7 Enoyl-CoA hydratase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003378 341.0
DYD1_k127_1282871_8 carbohydrate transport K11688,K21395 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000001079 289.0
DYD1_k127_1282871_9 Peptidase family M28 - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000006189 298.0
DYD1_k127_1300214_0 elongation factor G K02355 - - 4.238e-274 860.0
DYD1_k127_1300214_1 Belongs to the mannose-6-phosphate isomerase type 2 family K16011 - 2.7.7.13,5.3.1.8 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001385 548.0
DYD1_k127_1300214_10 Catalyzes the epimerization of the C3' and C5'positions of dTDP-6-deoxy-D-xylo-4-hexulose, forming dTDP-6-deoxy-L-lyxo-4- hexulose K01790 - 5.1.3.13 0.0000000000000000000000000000000000000000000000000000000000000000000000005327 252.0
DYD1_k127_1300214_11 enoyl-CoA hydratase - - - 0.00000000000000000000000000000000000000000000000000000000000000724 224.0
DYD1_k127_1300214_12 PspA/IM30 family K03969 GO:0003674,GO:0005488,GO:0005515,GO:0005543,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005886,GO:0006355,GO:0006950,GO:0008150,GO:0008289,GO:0009266,GO:0009271,GO:0009408,GO:0009605,GO:0009607,GO:0009615,GO:0009628,GO:0009889,GO:0009898,GO:0010468,GO:0010556,GO:0016020,GO:0019219,GO:0019222,GO:0019897,GO:0019898,GO:0031234,GO:0031323,GO:0031326,GO:0042802,GO:0043167,GO:0043168,GO:0043207,GO:0043433,GO:0044092,GO:0044424,GO:0044425,GO:0044444,GO:0044459,GO:0044464,GO:0048519,GO:0050789,GO:0050794,GO:0050896,GO:0051090,GO:0051171,GO:0051252,GO:0051704,GO:0051707,GO:0060187,GO:0060255,GO:0065007,GO:0065009,GO:0071944,GO:0080090,GO:0098552,GO:0098562,GO:0098586,GO:1903506,GO:2000112,GO:2001141 - 0.00000000000000000000000000000000000000000000000000000000000408 215.0
DYD1_k127_1300214_13 Plays an important role in DNA replication, recombination and repair. Binds to ssDNA and to an array of partner proteins to recruit them to their sites of action during DNA metabolism K03111 - - 0.000000000000000000000000000000000000000000000000000000001339 206.0
DYD1_k127_1300214_14 FKBP-type peptidyl-prolyl isomerase K03773 - 5.2.1.8 0.00000000000000000000000000000000000000000000000000000394 198.0
DYD1_k127_1300214_15 NUDIX domain - - - 0.00000000000000000000000000000000000004798 160.0
DYD1_k127_1300214_16 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily - - - 0.000000000000000000000000000000003426 134.0
DYD1_k127_1300214_17 PspC domain K03973 - - 0.000000000000000000000000000002733 126.0
DYD1_k127_1300214_18 SnoaL-like domain K06893 - - 0.000000000000000000000000000006469 125.0
DYD1_k127_1300214_19 Outer membrane lipoprotein - - - 0.0000000000000000000000000000813 123.0
DYD1_k127_1300214_2 Belongs to the NAD(P)-dependent epimerase dehydratase family. dTDP-glucose dehydratase subfamily K01710 GO:0000271,GO:0003674,GO:0003824,GO:0005975,GO:0005976,GO:0006629,GO:0008150,GO:0008152,GO:0008460,GO:0008610,GO:0008653,GO:0009058,GO:0009059,GO:0009103,GO:0009987,GO:0016051,GO:0016829,GO:0016835,GO:0016836,GO:0033692,GO:0034637,GO:0034645,GO:0043170,GO:0044237,GO:0044238,GO:0044249,GO:0044255,GO:0044260,GO:0044262,GO:0044264,GO:0045226,GO:0046379,GO:0071704,GO:1901135,GO:1901137,GO:1901576,GO:1903509 4.2.1.46 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008006 524.0
DYD1_k127_1300214_20 - - - - 0.000000000000000000000002609 106.0
DYD1_k127_1300214_21 Adenylyl- / guanylyl cyclase, catalytic domain - - - 0.000000000000000000000008794 117.0
DYD1_k127_1300214_22 Phage shock protein B K03970 - - 0.0000000000000000002448 89.0
DYD1_k127_1300214_23 beta-lactamase activity K07126 - - 0.000000000000000004562 99.0
DYD1_k127_1300214_24 SnoaL-like domain - - - 0.00000004064 62.0
DYD1_k127_1300214_3 Domain of unknown function (DUF4139) - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006295 510.0
DYD1_k127_1300214_4 Catalyzes the formation of dTDP-glucose, from dTTP and glucose 1-phosphate, as well as its pyrophosphorolysis K00973 - 2.7.7.24 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000166 445.0
DYD1_k127_1300214_5 - - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003488 413.0
DYD1_k127_1300214_6 Belongs to the FPP GGPP synthase family K02523 - 2.5.1.90 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006283 363.0
DYD1_k127_1300214_7 Belongs to the Orn Lys Arg decarboxylase class-II family K12526 - 2.7.2.4,4.1.1.20 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008726 354.0
DYD1_k127_1300214_8 Cell wall formation. Catalyzes the addition of glutamate to the nucleotide precursor UDP-N-acetylmuramoyl-L-alanine (UMA) K01925 - 6.3.2.9 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003995 322.0
DYD1_k127_1300214_9 Catalyzes the reduction of dTDP-6-deoxy-L-lyxo-4- hexulose to yield dTDP-L-rhamnose K00067 - 1.1.1.133 0.00000000000000000000000000000000000000000000000000000000000000000000000007374 259.0
DYD1_k127_1327566_0 Involved in mRNA degradation. Catalyzes the phosphorolysis of single-stranded polyribonucleotides processively in the 3'- to 5'-direction K00962 - 2.7.7.8 1.335e-312 970.0
DYD1_k127_1327566_1 One of the essential components for the initiation of protein synthesis. Protects formylmethionyl-tRNA from spontaneous hydrolysis and promotes its binding to the 30S ribosomal subunits. Also involved in the hydrolysis of GTP during the formation of the 70S ribosomal complex K02519 GO:0000166,GO:0001882,GO:0001883,GO:0003674,GO:0003676,GO:0003723,GO:0003743,GO:0003824,GO:0003924,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006412,GO:0006413,GO:0006518,GO:0006807,GO:0008135,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0016462,GO:0016787,GO:0016817,GO:0016818,GO:0017076,GO:0017111,GO:0019001,GO:0019538,GO:0032549,GO:0032550,GO:0032553,GO:0032555,GO:0032561,GO:0034641,GO:0034645,GO:0036094,GO:0043021,GO:0043024,GO:0043043,GO:0043167,GO:0043168,GO:0043170,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044424,GO:0044444,GO:0044464,GO:0044877,GO:0071704,GO:0097159,GO:0097216,GO:0097367,GO:1901265,GO:1901363,GO:1901564,GO:1901566,GO:1901576 - 2.348e-290 914.0
DYD1_k127_1327566_10 One of several proteins that assist in the late maturation steps of the functional core of the 30S ribosomal subunit. Associates with free 30S ribosomal subunits (but not with 30S subunits that are part of 70S ribosomes or polysomes). Required for efficient processing of 16S rRNA. May interact with the 5'-terminal helix region of 16S rRNA K02834 - - 0.0000000000000000000000000000000002546 136.0
DYD1_k127_1327566_11 Forms an intersubunit bridge (bridge B4) with the 23S rRNA of the 50S subunit in the ribosome K02956 - - 0.0000000000000000000000000000000002552 134.0
DYD1_k127_1327566_12 - - - - 0.0000000007546 63.0
DYD1_k127_1327566_2 Belongs to the enoyl-CoA hydratase isomerase family K07516 - 1.1.1.35 4.984e-237 752.0
DYD1_k127_1327566_3 NADH ubiquinone oxidoreductase subunit K00342 - 1.6.5.3 1.614e-212 666.0
DYD1_k127_1327566_4 Participates in both transcription termination and antitermination K02600 - - 7.464e-202 639.0
DYD1_k127_1327566_5 NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient K00343 - 1.6.5.3 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002335 518.0
DYD1_k127_1327566_6 Domain of Unknown Function (DUF748) - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002601 401.0
DYD1_k127_1327566_7 COG0604 NADPH quinone reductase and related Zn-dependent oxidoreductases K00344 - 1.6.5.5 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002196 352.0
DYD1_k127_1327566_8 Responsible for synthesis of pseudouridine from uracil- 55 in the psi GC loop of transfer RNAs K03177 - 5.4.99.25 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002123 306.0
DYD1_k127_1327566_9 Required for maturation of 30S ribosomal subunits K09748 GO:0000028,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006412,GO:0006518,GO:0006807,GO:0006996,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0016043,GO:0019538,GO:0022607,GO:0022613,GO:0022618,GO:0034622,GO:0034641,GO:0034645,GO:0042254,GO:0042255,GO:0042274,GO:0043043,GO:0043170,GO:0043603,GO:0043604,GO:0043933,GO:0044085,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044424,GO:0044444,GO:0044464,GO:0065003,GO:0070925,GO:0071704,GO:0071826,GO:0071840,GO:1901564,GO:1901566,GO:1901576 - 0.00000000000000000000000000000000000000002133 162.0
DYD1_k127_1353787_0 asparagine synthase K01953 - 6.3.5.4 9.922e-234 739.0
DYD1_k127_1353787_1 ABC-type multidrug transport system ATPase and permease K06147 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001062 607.0
DYD1_k127_1353787_2 NHL repeat - - - 0.000000000000000000000000000000000000000000000000000000000000203 229.0
DYD1_k127_1353787_3 Sulfotransferase domain - - - 0.00000000000000000000000000000000000000000001934 175.0
DYD1_k127_1353787_4 Sulfotransferase domain - - - 0.000000000000000000000000000000000000001075 164.0
DYD1_k127_1353787_5 Alginate export K16081 - - 0.00000000000000000000000000000000000001264 164.0
DYD1_k127_1353787_6 Glycosyl transferase 4-like domain - - - 0.00000000000000000000000000000000007324 147.0
DYD1_k127_1353787_7 Conserved repeat domain - - - 0.0000001025 63.0
DYD1_k127_1353787_8 Tetratricopeptide repeat - - - 0.0000001065 64.0
DYD1_k127_1353787_9 ethanolamine kinase activity K07251 - 2.7.1.89 0.0001084 54.0
DYD1_k127_135667_0 Belongs to the AlaDH PNT family K00259 - 1.4.1.1 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001197 528.0
DYD1_k127_135667_1 Oxidoreductase FAD-binding domain K00523 - 1.17.1.1 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001625 373.0
DYD1_k127_135667_2 COG0123 Deacetylases, including yeast histone deacetylase and acetoin utilization protein - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001178 333.0
DYD1_k127_135667_3 hydrolase of the alpha beta-hydrolase fold K07019 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000008224 304.0
DYD1_k127_135667_4 acetyltransferase K00655 - 2.3.1.51 0.00000000000000000000000000000000000000000000000000000000002181 216.0
DYD1_k127_135667_5 porphyrin biosynthesis protein K02498 - - 0.00000000000000000000000000000000000000000000006629 188.0
DYD1_k127_135667_6 enzyme of heme biosynthesis K02496 - 2.1.1.107 0.00000000000000000002745 102.0
DYD1_k127_135667_7 Copper binding proteins, plastocyanin/azurin family - - - 0.0000000000001367 80.0
DYD1_k127_135667_8 - - - - 0.0001357 50.0
DYD1_k127_1434639_0 transferase K02527 - 2.4.99.12,2.4.99.13,2.4.99.14,2.4.99.15 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001059 392.0
DYD1_k127_1434639_1 Catalyzes the transfer of laurate from lauroyl-acyl carrier protein (ACP) to Kdo(2)-lipid IV(A) to form Kdo(2)- (lauroyl)-lipid IV(A) K02517 - 2.3.1.241 0.0000000000000000000000000000000000000000000000000000000000000000000000000000002843 274.0
DYD1_k127_1434639_2 COG3307 Lipid A core - O-antigen ligase and related enzymes - - - 0.0000000000000000000000000000000000000002161 161.0
DYD1_k127_1434639_3 type I secretion outer membrane protein, TolC K12340 - - 0.000000000000000000000000000000001341 136.0
DYD1_k127_1438579_0 COG0471 Di- and tricarboxylate transporters - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002644 614.0
DYD1_k127_1438579_1 COG0471 Di- and tricarboxylate transporters - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002425 588.0
DYD1_k127_1438579_10 Key enzyme in folate metabolism. Catalyzes an essential reaction for de novo glycine and purine synthesis, and for DNA precursor synthesis K00287 - 1.5.1.3 0.000000000000000000000000000000000000000000000000005873 187.0
DYD1_k127_1438579_11 ApaG domain K06195 - - 0.000000000000000000000000000000006669 130.0
DYD1_k127_1438579_2 Protein of unknown function, DUF255 K06888 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007311 548.0
DYD1_k127_1438579_3 Together with LptE, is involved in the assembly of lipopolysaccharide (LPS) at the surface of the outer membrane K04744 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003515 522.0
DYD1_k127_1438579_4 Catalyzes the reductive methylation of 2'-deoxyuridine- 5'-monophosphate (dUMP) to 2'-deoxythymidine-5'-monophosphate (dTMP) while utilizing 5,10-methylenetetrahydrofolate (mTHF) as the methyl donor and reductant in the reaction, yielding dihydrofolate (DHF) as a by-product. This enzymatic reaction provides an intracellular de novo source of dTMP, an essential precursor for DNA biosynthesis K00560 - 2.1.1.45 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001097 442.0
DYD1_k127_1438579_5 Chaperone involved in the correct folding and assembly of outer membrane proteins. Recognizes specific patterns of aromatic residues and the orientation of their side chains, which are found more frequently in integral outer membrane proteins. May act in both early periplasmic and late outer membrane-associated steps of protein maturation K03771 - 5.2.1.8 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003289 376.0
DYD1_k127_1438579_6 Catalyzes the NAD(P)-dependent oxidation of 4- (phosphohydroxy)-L-threonine (HTP) into 2-amino-3-oxo-4- (phosphohydroxy)butyric acid which spontaneously decarboxylates to form 3-amino-2-oxopropyl phosphate (AHAP) K00097 - 1.1.1.262 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002334 359.0
DYD1_k127_1438579_7 Transfers the N-acyl diglyceride group on what will become the N-terminal cysteine of membrane lipoproteins K13292 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005989 336.0
DYD1_k127_1438579_8 Specifically dimethylates two adjacent adenosines (A1518 and A1519) in the loop of a conserved hairpin near the 3'-end of 16S rRNA in the 30S particle. May play a critical role in biogenesis of 30S subunits K02528 - 2.1.1.182 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000372 290.0
DYD1_k127_1438579_9 Hydrolyzes diadenosine 5',5'''-P1,P4-tetraphosphate to yield ADP K01525 GO:0003674,GO:0003824,GO:0004721,GO:0006464,GO:0006470,GO:0006793,GO:0006796,GO:0006807,GO:0008138,GO:0008150,GO:0008152,GO:0009987,GO:0016311,GO:0016787,GO:0016788,GO:0016791,GO:0019538,GO:0036211,GO:0042578,GO:0043170,GO:0043412,GO:0044237,GO:0044238,GO:0044260,GO:0044267,GO:0071704,GO:0140096,GO:1901564 3.6.1.41 0.0000000000000000000000000000000000000000000000000000000000000000000007071 246.0
DYD1_k127_1460047_0 Catalyzes the formation of L-homocysteine from O- succinyl-L-homoserine (OSHS) and hydrogen sulfide - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004328 362.0
DYD1_k127_1460047_1 Protein involved in biosynthesis of mitomycin antibiotics polyketide fumonisin - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000001086 286.0
DYD1_k127_1460047_2 serine protease - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000001118 294.0
DYD1_k127_1460047_3 Peptidase family S51 K13282 - 3.4.15.6 0.000000000000000000000000000000000000000000000000000000000000002727 228.0
DYD1_k127_1460047_4 Belongs to the sigma-70 factor family. ECF subfamily K03088 - - 0.0000000000000000000000000000000000000001608 157.0
DYD1_k127_1482112_0 Pyridoxal-dependent decarboxylase conserved domain K01593,K13745 - 4.1.1.105,4.1.1.28,4.1.1.86 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001783 374.0
DYD1_k127_1482112_1 addiction module antidote protein - - - 0.0000000000000000000000000000000000000000000097 166.0
DYD1_k127_1482112_2 addiction module killer protein - - - 0.0000000000000000000000000000000002139 136.0
DYD1_k127_1482112_3 Activator of Hsp90 ATPase homolog 1-like protein - - - 0.000000000000000000000000000000002232 137.0
DYD1_k127_1482112_4 helix_turn_helix, Arsenical Resistance Operon Repressor - - - 0.00000000000000000000000000000001373 130.0
DYD1_k127_1482112_5 type IV pilus modification protein PilV K02671 - - 0.000000000000001902 83.0
DYD1_k127_1482112_6 Serine aminopeptidase, S33 - - - 0.00000065 51.0
DYD1_k127_1482112_7 Type IV Pilus-assembly protein W K02672 - - 0.00000778 57.0
DYD1_k127_1482112_8 Type IV pilus assembly protein PilX C-term K02673 - - 0.00005286 53.0
DYD1_k127_1545331_0 FAD dependent oxidoreductase K00303 - 1.5.3.1 6.309e-228 712.0
DYD1_k127_1545331_1 Belongs to the BCCT transporter (TC 2.A.15) family K02168,K03451 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001187 571.0
DYD1_k127_1545331_10 Collagen triple helix repeat (20 copies) - - - 0.0002281 47.0
DYD1_k127_1545331_2 Belongs to the GcvT family K00302 GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0044424,GO:0044464 1.5.3.1 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001004 418.0
DYD1_k127_1545331_3 COG4977 Transcriptional regulator containing an amidase domain and an AraC-type DNA-binding HTH domain K21826 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009243 373.0
DYD1_k127_1545331_4 Transcriptional regulator containing an amidase domain and an AraC-type DNA-binding HTH domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000007364 301.0
DYD1_k127_1545331_5 DJ-1/PfpI family - - - 0.0000000000000000000000000000000000000000000000000003391 195.0
DYD1_k127_1545331_6 Sarcosine oxidase, delta subunit family K00304 - 1.5.3.1 0.00000000000000000000000000000000000000000004966 162.0
DYD1_k127_1545331_7 Belongs to the ompA family - - - 0.0000000000000000000000000000000000000000002645 166.0
DYD1_k127_1545331_8 - - - - 0.000000000000000000000000000000000000000001525 161.0
DYD1_k127_1545331_9 protein conserved in bacteria K09948 - - 0.0000000000000000000000000000000000000548 144.0
DYD1_k127_1547920_0 alanine symporter K03310 - - 1.574e-222 699.0
DYD1_k127_1547920_1 Integral membrane protein TerC family K05794 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009706 359.0
DYD1_k127_1547920_2 Glycosyl transferase family 2 - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009545 352.0
DYD1_k127_1547920_3 Intracellular protease, PfpI family K05520 - 3.5.1.124 0.0000000000000000000000000000000000000000000000000000000000000001295 226.0
DYD1_k127_1547920_4 4-amino-4-deoxy-L-arabinose transferase and related glycosyltransferases of PMT family - - - 0.000000000000000000000000000000000000000000296 179.0
DYD1_k127_1547920_5 Sortase family K07284 - 3.4.22.70 0.000000000000000000000000000000000000001824 155.0
DYD1_k127_1547920_6 GtrA-like protein - - - 0.00000000001283 74.0
DYD1_k127_1547920_7 - - - - 0.0000008834 50.0
DYD1_k127_1555290_0 7 transmembrane helices usually fused to an inactive transglutaminase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008094 443.0
DYD1_k127_1555290_1 Sugar-transfer associated ATP-grasp - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003224 331.0
DYD1_k127_1555290_2 - - - - 0.0000000000000000000000000000000000000000000000000005894 194.0
DYD1_k127_1555290_3 Oligopeptide transporter OPT - - - 0.000000000000000000000000000000000000000000000002351 175.0
DYD1_k127_1555290_4 Protein of unknown function (DUF3450) - - - 0.00000000000134 71.0
DYD1_k127_1600352_0 Na( ) H( ) antiporter that extrudes sodium in exchange for external protons K03314 - - 7.46e-209 659.0
DYD1_k127_1600352_1 Catalyzes the formation of S-adenosylmethionine (AdoMet) from methionine and ATP. The overall synthetic reaction is composed of two sequential steps, AdoMet formation and the subsequent tripolyphosphate hydrolysis which occurs prior to release of AdoMet from the enzyme K00789 - 2.5.1.6 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000176 561.0
DYD1_k127_1600352_2 Potassium transporter TrkA - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001058 466.0
DYD1_k127_1600352_3 CBS domain - - - 0.000000000000000000000000000000006967 132.0
DYD1_k127_1600352_4 4-amino-4-deoxy-L-arabinose transferase and related glycosyltransferases of PMT family - - - 0.000000000000000000000000000001706 131.0
DYD1_k127_1600352_5 ferredoxin - - - 0.000000000000000000000000001143 115.0
DYD1_k127_1600423_0 Histidine kinase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000225 451.0
DYD1_k127_1600423_1 ABC transporter K02065 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001493 339.0
DYD1_k127_1600423_2 COGs COG0767 ABC-type transport system involved in resistance to organic solvents permease component K02066 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000006 321.0
DYD1_k127_1600423_3 outer membrane usher protein K07347 - - 0.000000000000000000000000000000000000000004598 159.0
DYD1_k127_1600423_4 MlaD protein K06192 - - 0.00000000000000000000000000000000000000003503 166.0
DYD1_k127_1600423_5 Type I phosphodiesterase / nucleotide pyrophosphatase - - - 0.00000000000000000000000000000000003391 156.0
DYD1_k127_1600423_6 secreted protein - - - 0.000000000000000000000000003337 118.0
DYD1_k127_1600423_7 ABC-type transport auxiliary lipoprotein component K09857 - - 0.00000000000004653 81.0
DYD1_k127_1611011_0 Major facilitator Superfamily - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002386 398.0
DYD1_k127_1611011_1 integral membrane protein - - - 0.000000000000000000000000000000000000000000000000000000000000000000000002412 254.0
DYD1_k127_1611011_2 Methyltransferase domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000006377 236.0
DYD1_k127_1627620_0 COG1506 Dipeptidyl aminopeptidases acylaminoacyl-peptidases - - - 3.761e-301 942.0
DYD1_k127_1627620_1 Helix-hairpin-helix domain K04477 - - 0.0000000000000000000000000000000001943 133.0
DYD1_k127_1676594_0 Circularly permuted ATP-grasp type 2 - - - 5.335e-222 697.0
DYD1_k127_1676594_1 Adenylate cyclase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001408 415.0
DYD1_k127_1676594_2 zinc-ribbon domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002695 311.0
DYD1_k127_1676594_3 PFAM 20S proteasome, A and B subunits K07395 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000005373 297.0
DYD1_k127_1676594_4 Prolyl 4-hydroxylase alpha subunit homologues. - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000004521 276.0
DYD1_k127_1676594_5 A predicted alpha-helical domain with a conserved ER motif. - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000005577 260.0
DYD1_k127_1676594_6 Acetyltransferase (GNAT) domain K03790 - 2.3.1.128 0.00000000000000000000000000000000000000003342 159.0
DYD1_k127_1676594_7 Hsp20/alpha crystallin family K13993 - - 0.00000000000000000000000000001971 125.0
DYD1_k127_1676594_8 Protein of unknown function (DUF2905) - - - 0.000000000000000000000005988 102.0
DYD1_k127_171819_0 Belongs to the WrbA family K03809 - 1.6.5.2 0.000000000000000000000000000000000000000000000000000000000000000000000000000003175 266.0
DYD1_k127_171819_1 COG1393 Arsenate reductase and related proteins, glutaredoxin family K00537 - 1.20.4.1 0.0000000000000000000000000000000000000000000001069 171.0
DYD1_k127_171819_2 UPF0761 membrane protein K07058 GO:0005575,GO:0005623,GO:0005886,GO:0016020,GO:0044464,GO:0071944 - 0.0000000000000000000003506 101.0
DYD1_k127_1721502_0 COG0022 Pyruvate 2-oxoglutarate dehydrogenase complex, dehydrogenase (E1) component, eukaryotic type, beta subunit K00167 - 1.2.4.4 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003267 525.0
DYD1_k127_1721502_1 Pyruvate 2-oxoglutarate dehydrogenase complex, dehydrogenase (E1) component, eukaryotic type, alpha subunit K00166 - 1.2.4.4 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001538 483.0
DYD1_k127_1721502_2 Dihydrolipoamide acetyltransferase component of pyruvate dehydrogenase complex K09699 - 2.3.1.168 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002334 407.0
DYD1_k127_1721502_3 receptor K02014 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001282 353.0
DYD1_k127_1721502_4 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001133 342.0
DYD1_k127_1721502_5 ATP ADP translocase K03301 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004729 336.0
DYD1_k127_1721502_6 COG2755 Lysophospholipase L1 and related esterases K10804 GO:0003674,GO:0003824,GO:0004620,GO:0004622,GO:0005488,GO:0005515,GO:0005575,GO:0005623,GO:0006508,GO:0006807,GO:0008150,GO:0008152,GO:0008233,GO:0016289,GO:0016290,GO:0016298,GO:0016787,GO:0016788,GO:0016790,GO:0019538,GO:0030288,GO:0030313,GO:0031975,GO:0042597,GO:0042802,GO:0043170,GO:0044238,GO:0044464,GO:0047617,GO:0052689,GO:0071704,GO:0140096,GO:1901564 3.1.1.5 0.000000000000000000000000000000000000000000000000000000000000000000001431 241.0
DYD1_k127_1721502_7 Glyoxalase-like domain - - - 0.000000000001614 77.0
DYD1_k127_1721502_8 guanylate cyclase inhibitor activity - GO:0002020,GO:0003674,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005886,GO:0005903,GO:0005911,GO:0006140,GO:0006810,GO:0006811,GO:0006833,GO:0007154,GO:0007165,GO:0007166,GO:0007167,GO:0007168,GO:0008022,GO:0008150,GO:0008200,GO:0009636,GO:0009889,GO:0009890,GO:0009892,GO:0009966,GO:0009968,GO:0009987,GO:0010563,GO:0010646,GO:0010648,GO:0010752,GO:0010754,GO:0010851,GO:0010852,GO:0016020,GO:0016247,GO:0016248,GO:0019219,GO:0019220,GO:0019222,GO:0019899,GO:0023051,GO:0023052,GO:0023057,GO:0030054,GO:0030234,GO:0030249,GO:0030251,GO:0030808,GO:0030809,GO:0031279,GO:0031280,GO:0031282,GO:0031283,GO:0031323,GO:0031324,GO:0031326,GO:0031327,GO:0032991,GO:0035003,GO:0042044,GO:0042221,GO:0043086,GO:0043296,GO:0044092,GO:0044424,GO:0044425,GO:0044444,GO:0044459,GO:0044464,GO:0045177,GO:0045934,GO:0045936,GO:0045980,GO:0048519,GO:0048523,GO:0048583,GO:0048585,GO:0050789,GO:0050790,GO:0050794,GO:0050896,GO:0051171,GO:0051172,GO:0051174,GO:0051179,GO:0051234,GO:0051339,GO:0051350,GO:0051716,GO:0062012,GO:0062014,GO:0065007,GO:0065009,GO:0071944,GO:0080090,GO:0098772,GO:0098796,GO:0098797,GO:0098862,GO:0099106,GO:1900371,GO:1900372,GO:1900542,GO:1900543,GO:1902531,GO:1902532,GO:1990381 - 0.0002232 53.0
DYD1_k127_1734771_0 Belongs to the zinc-containing alcohol dehydrogenase family. Class-III subfamily K00121 - 1.1.1.1,1.1.1.284 1.61e-208 652.0
DYD1_k127_1734771_1 Serine hydrolase involved in the detoxification of formaldehyde K01070 - 3.1.2.12 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003196 420.0
DYD1_k127_1734771_2 amine dehydrogenase activity K17285 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000002978 273.0
DYD1_k127_1734771_3 mechanosensitive ion channel K03442 - - 0.0000000000000000000000000000000000000000000000000000000000000000008441 231.0
DYD1_k127_1741552_0 Sulfotransferase domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003552 324.0
DYD1_k127_1741552_1 Pfam SNARE associated Golgi protein - - - 0.00000000000000000000000000000000000000000000000000000000000000000002754 251.0
DYD1_k127_1741552_2 Tetratricopeptide repeat - - - 0.0000000000000000000000000000000000000000000000000000002258 209.0
DYD1_k127_1741552_3 Pfam SNARE associated Golgi protein - - - 0.0000000000000001416 85.0
DYD1_k127_1767072_0 Bifunctional enzyme with both catalase and broad- spectrum peroxidase activity K03782 - 1.11.1.21 0.0 1155.0
DYD1_k127_1767072_1 Catalyzes the attachment of tyrosine to tRNA(Tyr) in a two-step reaction tyrosine is first activated by ATP to form Tyr- AMP and then transferred to the acceptor end of tRNA(Tyr) K01866 GO:0003674,GO:0003824,GO:0004812,GO:0004831,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006082,GO:0006139,GO:0006399,GO:0006412,GO:0006418,GO:0006437,GO:0006518,GO:0006520,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0016070,GO:0016874,GO:0016875,GO:0019538,GO:0019752,GO:0034641,GO:0034645,GO:0034660,GO:0043038,GO:0043039,GO:0043043,GO:0043170,GO:0043436,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044281,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0071704,GO:0090304,GO:0140098,GO:0140101,GO:1901360,GO:1901564,GO:1901566,GO:1901576 6.1.1.1 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007206 534.0
DYD1_k127_1767072_10 nUDIX hydrolase K01515,K03574 - 3.6.1.13,3.6.1.55 0.00000000000000000000000000000000000000000000000000000001075 204.0
DYD1_k127_1767072_11 Protein of unknown function (DUF819) - - - 0.0000000000000000000000000000000000000000000000000001239 201.0
DYD1_k127_1767072_12 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily - - - 0.000000000000000000000000000000000000000000000000001345 185.0
DYD1_k127_1767072_13 Inner membrane component domain - - - 0.0000000000000000000000000000000000001374 145.0
DYD1_k127_1767072_14 TspO/MBR family K05770 - - 0.0000000000000000000000000000000004461 138.0
DYD1_k127_1767072_15 cell adhesion involved in biofilm formation - - - 0.00000000000000000000000000001697 135.0
DYD1_k127_1767072_16 Acetyltransferase (GNAT) domain - - - 0.000000001356 59.0
DYD1_k127_1767072_2 Membrane dipeptidase (Peptidase family M19) K01273 - 3.4.13.19 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002654 463.0
DYD1_k127_1767072_3 COG0739 Membrane proteins related to metalloendopeptidases - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006981 360.0
DYD1_k127_1767072_4 Catalyzes the specific phosphorylation of 1,6-anhydro-N- acetylmuramic acid (anhMurNAc) with the simultaneous cleavage of the 1,6-anhydro ring, generating MurNAc-6-P. Is required for the utilization of anhMurNAc either imported from the medium or derived from its own cell wall murein, and thus plays a role in cell wall recycling K09001 - 2.7.1.170 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002901 330.0
DYD1_k127_1767072_5 membrane transporter protein K07090 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000003308 298.0
DYD1_k127_1767072_6 COG1226 Kef-type K transport systems K10716 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000002641 263.0
DYD1_k127_1767072_7 Pfam Periplasmic binding protein K02016,K06858 - - 0.00000000000000000000000000000000000000000000000000000000000001863 229.0
DYD1_k127_1767072_8 Belongs to the Fur family K03711,K22297 - - 0.000000000000000000000000000000000000000000000000000000000000812 214.0
DYD1_k127_1767072_9 exo-alpha-(2->6)-sialidase activity - - - 0.000000000000000000000000000000000000000000000000000000000006004 229.0
DYD1_k127_1778856_0 COG2366 Protein related to penicillin acylase K01434 - 3.5.1.11 5.481e-212 683.0
DYD1_k127_1784595_0 peptidase M48, Ste24p - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001797 430.0
DYD1_k127_1784595_1 Cytochrome C oxidase, cbb3-type, subunit III - - - 0.00000000000000000000000000000000000002762 152.0
DYD1_k127_1784595_10 Protein of unknown function (DUF3096) - - - 0.0000000000122 66.0
DYD1_k127_1784595_11 Belongs to the N-Me-Phe pilin family K02650 - - 0.000001737 56.0
DYD1_k127_1784595_12 - - - - 0.0001075 55.0
DYD1_k127_1784595_3 PFAM T4-like virus tail tube protein gp19 - - - 0.0000000000000000000000003329 111.0
DYD1_k127_1784595_5 - - - - 0.00000000000000002702 84.0
DYD1_k127_1784595_8 Protein of unknown function (DUF3494) - - - 0.00000000000006946 85.0
DYD1_k127_1784595_9 Belongs to the peptidase S8 family - - - 0.000000000001175 81.0
DYD1_k127_1787821_0 TonB dependent receptor K02014 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000007662 301.0
DYD1_k127_1787821_1 oxidoreductase activity K02674,K07114 - - 0.000000000000000001851 100.0
DYD1_k127_1795295_0 Metallo-peptidase family M12B Reprolysin-like - - - 0.0 1072.0
DYD1_k127_1795295_1 Histidine kinase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001609 449.0
DYD1_k127_1795295_2 N-terminal domain of oxidoreductase K00344 - 1.6.5.5 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001035 393.0
DYD1_k127_1795295_3 FAD linked oxidase domain protein - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005231 385.0
DYD1_k127_1807953_0 COG0474 Cation transport ATPase K01537 - 3.6.3.8 3.226e-255 807.0
DYD1_k127_1807953_1 Receptor - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003002 416.0
DYD1_k127_1807953_2 Transcriptional regulator K01420 - - 0.00000000000000000000000000000000000000000000000000000002317 205.0
DYD1_k127_1807953_3 phosphoribosyl transferase K07100 - - 0.00000000000000000000000000000000000000000000000002265 186.0
DYD1_k127_1807953_4 Domain in cystathionine beta-synthase and other proteins. - - - 0.0000000000000000000000000002708 119.0
DYD1_k127_1807953_5 Protein of unknown function (DUF2892) - - - 0.00000000000000000000000000154 112.0
DYD1_k127_1807953_6 Outer membrane lipoprotein-sorting protein - - - 0.00000000005895 63.0
DYD1_k127_1813244_0 TIGRFAM asparagine synthase (glutamine-hydrolyzing) K01953 GO:0000166,GO:0003674,GO:0003824,GO:0004066,GO:0004071,GO:0005488,GO:0005515,GO:0005524,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006082,GO:0006520,GO:0006528,GO:0006529,GO:0006541,GO:0006807,GO:0008144,GO:0008150,GO:0008152,GO:0008652,GO:0009056,GO:0009058,GO:0009063,GO:0009064,GO:0009066,GO:0009067,GO:0009987,GO:0016053,GO:0016054,GO:0016211,GO:0016597,GO:0016874,GO:0016879,GO:0016880,GO:0016884,GO:0017076,GO:0019752,GO:0030554,GO:0031406,GO:0032553,GO:0032555,GO:0032559,GO:0032787,GO:0034641,GO:0035639,GO:0036094,GO:0042802,GO:0043167,GO:0043168,GO:0043177,GO:0043436,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044248,GO:0044249,GO:0044271,GO:0044281,GO:0044282,GO:0044283,GO:0044424,GO:0044444,GO:0044464,GO:0046394,GO:0046395,GO:0071704,GO:0072330,GO:0097159,GO:0097367,GO:1901265,GO:1901363,GO:1901564,GO:1901565,GO:1901566,GO:1901575,GO:1901576,GO:1901605,GO:1901607 6.3.5.4 4.678e-210 666.0
DYD1_k127_1813244_1 COG1629 Outer membrane receptor proteins, mostly Fe transport - - - 3.318e-194 640.0
DYD1_k127_1813244_2 TIGRFAM sarcosine oxidase, beta subunit family, heterotetrameric form K00303 - 1.5.3.1 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001667 424.0
DYD1_k127_1813244_3 COGs COG5616 integral membrane protein - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000009695 313.0
DYD1_k127_1813244_4 with TrpE catalyzes the formation of anthranilate and glutamate from chorismate and glutamine K01658,K01664 - 2.6.1.85,4.1.3.27 0.0000001465 53.0
DYD1_k127_1836929_0 Cell division protein ftsk K03466 - - 4.021e-253 801.0
DYD1_k127_1836929_1 Belongs to the class-II pyridine nucleotide-disulfide oxidoreductase family K00384 - 1.8.1.9 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001858 501.0
DYD1_k127_1836929_2 protein conserved in bacteria K09919 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009838 375.0
DYD1_k127_1836929_3 Functions in the N-end rule pathway of protein degradation where it conjugates Leu, Phe and, less efficiently, Met from aminoacyl-tRNAs to the N-termini of proteins containing an N-terminal arginine or lysine K00684 GO:0003674,GO:0003824,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006508,GO:0006807,GO:0008150,GO:0008152,GO:0008233,GO:0008914,GO:0016740,GO:0016746,GO:0016755,GO:0016787,GO:0019538,GO:0043170,GO:0044238,GO:0044424,GO:0044464,GO:0071704,GO:0140096,GO:1901564 2.3.2.6 0.000000000000000000000000000000004885 134.0
DYD1_k127_1837472_0 Belongs to the heme-copper respiratory oxidase family K00404 - 1.9.3.1 8.889e-255 791.0
DYD1_k127_1837472_1 TIGRFAM cytochrome c oxidase accessory protein - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002143 546.0
DYD1_k127_1837472_10 FixH K09926 - - 0.000000004458 61.0
DYD1_k127_1837472_11 Cbb3-type cytochrome oxidase component FixQ K00407 - - 0.00000002557 59.0
DYD1_k127_1837472_12 - - - - 0.000006735 53.0
DYD1_k127_1837472_2 Na( ) H( ) antiporter that extrudes sodium in exchange for external protons K03313 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005273 417.0
DYD1_k127_1837472_3 C-type cytochrome. Part of the cbb3-type cytochrome c oxidase complex K00406 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001052 327.0
DYD1_k127_1837472_4 cAMP biosynthetic process - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009837 325.0
DYD1_k127_1837472_5 COG2993 Cbb3-type cytochrome oxidase, cytochrome c subunit K00405 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000283 304.0
DYD1_k127_1837472_6 Major Facilitator Superfamily - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000001679 259.0
DYD1_k127_1837472_7 Predicted integral membrane protein (DUF2189) - - - 0.000000000000000000000000000000000000000000000000000000000000000000000002127 253.0
DYD1_k127_1837472_8 COG2217 Cation transport ATPase K01533 - 3.6.3.4 0.00000000000000000000000000000000000000000000000002061 188.0
DYD1_k127_1853335_0 General secretion pathway protein K02454 GO:0003674,GO:0005488,GO:0005515,GO:0042802 - 4.82e-236 743.0
DYD1_k127_1853335_1 General secretion pathway protein K02453 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006891 533.0
DYD1_k127_1853335_10 - - - - 0.0000000000369 70.0
DYD1_k127_1853335_11 General secretion pathway protein K02463 - - 0.000000007762 66.0
DYD1_k127_1853335_2 General secretion pathway protein K02455 GO:0002790,GO:0005575,GO:0005623,GO:0005886,GO:0006810,GO:0008104,GO:0008150,GO:0009306,GO:0009987,GO:0015031,GO:0015628,GO:0015833,GO:0016020,GO:0032940,GO:0033036,GO:0042886,GO:0044464,GO:0045184,GO:0046903,GO:0051179,GO:0051234,GO:0055085,GO:0071702,GO:0071705,GO:0071806,GO:0071944,GO:0098776 - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003882 417.0
DYD1_k127_1853335_3 Type II secretion system protein K K02460 - - 0.0000000000000000000000000000000000000000000000000000000000000000000001311 249.0
DYD1_k127_1853335_4 General secretion pathway protein K02461 - - 0.000000000000000000000000000000000000000000000000000309 200.0
DYD1_k127_1853335_5 General secretion pathway protein K02459 - - 0.0000000000000000000000000000000001903 143.0
DYD1_k127_1853335_6 general secretion pathway protein K02456 - - 0.00000000000000000000000000000008644 135.0
DYD1_k127_1853335_7 COG4970 Tfp pilus assembly protein FimT K02457 - - 0.00000000000000000000000003271 113.0
DYD1_k127_1853335_8 Prokaryotic N-terminal methylation motif K02458 - - 0.000000000000000009393 89.0
DYD1_k127_1853335_9 General secretion pathway protein K02462 - - 0.0000000000000007707 88.0
DYD1_k127_1876663_0 PFAM Aminotransferase class-III K01845 - 5.4.3.8 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000333 612.0
DYD1_k127_1876663_1 LssY C-terminus - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005834 409.0
DYD1_k127_1876663_2 sulfuric ester hydrolase activity - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003264 358.0
DYD1_k127_1876663_3 Condenses 4-methyl-5-(beta-hydroxyethyl)thiazole monophosphate (THZ-P) and 2-methyl-4-amino-5-hydroxymethyl pyrimidine pyrophosphate (HMP-PP) to form thiamine monophosphate (TMP) K00788 GO:0003674,GO:0003824,GO:0004789,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006725,GO:0006766,GO:0006767,GO:0006772,GO:0006790,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009110,GO:0009228,GO:0009987,GO:0016740,GO:0016765,GO:0017144,GO:0018130,GO:0019438,GO:0034641,GO:0042364,GO:0042723,GO:0042724,GO:0044237,GO:0044249,GO:0044271,GO:0044272,GO:0044281,GO:0044283,GO:0044424,GO:0044464,GO:0046483,GO:0071704,GO:0072527,GO:0072528,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576 2.5.1.3 0.000000000000000000000000000000000000000000000000000000000222 209.0
DYD1_k127_1876663_4 Hydrolyzes cAMP to 5'-AMP. Plays an important regulatory role in modulating the intracellular concentration of cAMP, thereby influencing cAMP-dependent processes K03651 - 3.1.4.53 0.0000000000000000000000000000000000000000000000000004335 193.0
DYD1_k127_1876663_5 PFAM Rubredoxin-type Fe(Cys)4 protein - - - 0.000000000000000000000009428 112.0
DYD1_k127_1876663_6 Uncharacterized ACR, COG1430 K09005 - - 0.00000000602 57.0
DYD1_k127_1876663_7 ATP-dependent protease La (LON) substrate-binding domain K07157 - - 0.0006157 42.0
DYD1_k127_1899772_0 O-Antigen ligase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000002405 270.0
DYD1_k127_1899772_1 Calcineurin-like phosphoesterase K07313 - 3.1.3.16 0.00000000000000000000000000000000000000000000000000000000000000000000003377 249.0
DYD1_k127_1899772_2 Glycosyl transferase, family 4 K02851 - 2.7.8.33,2.7.8.35 0.000000000000000000000000000000000000000000000000000000000006618 218.0
DYD1_k127_1899772_3 Chain length determinant protein K16554 - - 0.0000000000000000000000000000000000000000000000000008555 194.0
DYD1_k127_1899772_4 Sel1-like repeats. K07126 - - 0.0000000000000000001667 99.0
DYD1_k127_1899772_5 - - - - 0.00000000003984 72.0
DYD1_k127_1899772_6 domain, Protein K03112 - - 0.0000002811 61.0
DYD1_k127_1939745_0 COG1629 Outer membrane receptor proteins, mostly Fe transport - - - 0.0 1080.0
DYD1_k127_1939745_1 Prolyl oligopeptidase, N-terminal beta-propeller domain - - - 3.36e-250 790.0
DYD1_k127_1939745_2 Putative 2OG-Fe(II) oxygenase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005756 503.0
DYD1_k127_1939745_3 Evidence 4 Homologs of previously reported genes of K09700 - - 0.000000000000000000000000000000000000000000001911 166.0
DYD1_k127_1942451_0 Belongs to the formate--tetrahydrofolate ligase family K01938 - 6.3.4.3 1.018e-257 804.0
DYD1_k127_1942451_1 Las17-binding protein actin regulator - - - 0.00000000000000000000000000000000000000000000000000001252 192.0
DYD1_k127_1942451_2 Involved in the tonB-independent uptake of proteins - - - 0.00000000000000000000000000000000000000001733 166.0
DYD1_k127_1942840_0 Proton pump that utilizes the energy of pyrophosphate hydrolysis as the driving force for proton movement across the membrane. Generates a proton motive force K15987 - 3.6.1.1 0.0 1008.0
DYD1_k127_1942840_1 Required to facilitate the formation of correct disulfide bonds in some periplasmic proteins and for the assembly of the periplasmic c-type cytochromes. Acts by transferring electrons from cytoplasmic thioredoxin to the periplasm. This transfer involves a cascade of disulfide bond formation and reduction steps K04084 - 1.8.1.8 4.61e-201 651.0
DYD1_k127_1942840_2 Catalyzes the phosphorylation of D-fructose 6-phosphate, the first committing step of glycolysis. Uses inorganic phosphate (PPi) as phosphoryl donor instead of ATP like common ATP-dependent phosphofructokinases (ATP-PFKs), which renders the reaction reversible, and can thus function both in glycolysis and gluconeogenesis. Consistently, PPi-PFK can replace the enzymes of both the forward (ATP-PFK) and reverse (fructose-bisphosphatase (FBPase)) reactions K21071 - 2.7.1.11,2.7.1.90 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008871 609.0
DYD1_k127_1942840_3 Reutilizes the intact tripeptide L-alanyl-gamma-D- glutamyl-meso-diaminopimelate by linking it to UDP-N- acetylmuramate K02558 - 6.3.2.45 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003049 537.0
DYD1_k127_1942840_4 Catalyzes the reversible transfer of the terminal phosphate group between ATP and AMP. Plays an important role in cellular energy homeostasis and in adenine nucleotide metabolism K00939 - 2.7.4.3 0.0000000000000000000000000000000000000000000000000000000000001066 217.0
DYD1_k127_1942840_5 ATP-dependent protease La (LON) substrate-binding domain K07157 - - 0.0000000000000000000000000000000000000000000000000000004288 198.0
DYD1_k127_1942840_6 - - - - 0.000000000000000000000000000000000000000000000004638 184.0
DYD1_k127_1942840_7 Thioredoxin-like - - - 0.00000000000000000000002322 108.0
DYD1_k127_1942840_8 Belongs to the sulfur carrier protein TusA family K04085 - - 0.00000000000000197 80.0
DYD1_k127_1956828_0 Catalyzes the reduction of ribonucleotides to deoxyribonucleotides. May function to provide a pool of deoxyribonucleotide precursors for DNA repair during oxygen limitation and or for immediate growth after restoration of oxygen K00525 - 1.17.4.1 0.0 1154.0
DYD1_k127_1956828_1 Glycerol-3-phosphate dehydrogenase K00057 - 1.1.1.94 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003239 381.0
DYD1_k127_1956828_2 One of the proteins required for the normal export of preproteins out of the cell cytoplasm. It is a molecular chaperone that binds to a subset of precursor proteins, maintaining them in a translocation-competent state. It also specifically binds to its receptor SecA K03071 - - 0.00000000000000000000000000000000000000000000555 168.0
DYD1_k127_199203_0 Cell wall formation. Adds enolpyruvyl to UDP-N- acetylglucosamine K00790 - 2.5.1.7 3.691e-195 616.0
DYD1_k127_199203_1 COG3547 Transposase and inactivated derivatives K07486 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001194 477.0
DYD1_k127_199203_10 Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released K03092 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002882 385.0
DYD1_k127_199203_11 AI-2E family transporter - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001278 347.0
DYD1_k127_199203_12 Catalyzes the ATP- as well as the pyrophosphate- dependent phosphorylation of a specific serine residue in HPr, a phosphocarrier protein of the phosphoenolpyruvate-dependent sugar phosphotransferase system (PTS). HprK P also catalyzes the pyrophosphate-producing, inorganic phosphate-dependent dephosphorylation (phosphorolysis) of seryl-phosphorylated HPr (P- Ser-HPr) K06023 GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0044424,GO:0044444,GO:0044464 - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001262 340.0
DYD1_k127_199203_13 abc transporter atp-binding protein K06861 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000176 336.0
DYD1_k127_199203_14 antiporter K07301 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001774 321.0
DYD1_k127_199203_15 Displays ATPase and GTPase activities K06958 GO:0003674,GO:0003676,GO:0003723,GO:0005488,GO:0005515,GO:0006139,GO:0006396,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0009987,GO:0010467,GO:0016070,GO:0034641,GO:0042802,GO:0043170,GO:0044237,GO:0044238,GO:0046483,GO:0071704,GO:0090304,GO:0097159,GO:1901360,GO:1901363 - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000005447 288.0
DYD1_k127_199203_16 Catalyzes the transfer of a formyl group from 10- formyltetrahydrofolate to 5-phospho-ribosyl-glycinamide (GAR), producing 5-phospho-ribosyl-N-formylglycinamide (FGAR) and tetrahydrofolate K11175 - 2.1.2.2 0.00000000000000000000000000000000000000000000000000000002813 205.0
DYD1_k127_199203_17 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase, YrbI family K03270 - 3.1.3.45 0.000000000000000000000000000000000000000000000000007357 185.0
DYD1_k127_199203_18 - - - - 0.00000000000000000000000000000000000000000000001399 192.0
DYD1_k127_199203_19 PFAM CDP-alcohol phosphatidyltransferase K08744 - 2.7.8.41 0.0000000000000000000000000000000000000000002565 165.0
DYD1_k127_199203_2 Acts as a magnesium transporter K06213 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001346 481.0
DYD1_k127_199203_20 Belongs to the DnaA family. HdA subfamily K10763 - - 0.000000000000000000000000000000000000007365 154.0
DYD1_k127_199203_21 PTS IIA-like nitrogen-regulatory protein PtsN K02806 - - 0.00000000000000000000000000000000000001356 149.0
DYD1_k127_199203_22 Sigma 54 modulation protein K05808 - - 0.0000000000000000000000000000000004233 134.0
DYD1_k127_199203_23 Belongs to the BolA IbaG family - - - 0.0000000000000000000000008518 105.0
DYD1_k127_199203_24 protein conserved in bacteria K09938 - - 0.000000000000000000000001872 121.0
DYD1_k127_199203_25 PTS HPr component phosphorylation site K11189 - - 0.0000000000000000000007448 98.0
DYD1_k127_199203_26 system, fructose subfamily IIA component K02821 - 2.7.1.194 0.000000000000000000004658 97.0
DYD1_k127_199203_27 Involved in the assembly of lipopolysaccharide (LPS). Required for the translocation of LPS from the inner membrane to the outer membrane. May form a bridge between the inner membrane and the outer membrane, via interactions with LptC and LptD, thereby facilitating LPS transfer across the periplasm K09774 GO:0003674,GO:0005215,GO:0005488,GO:0005515,GO:0005575,GO:0005623,GO:0006810,GO:0006869,GO:0008150,GO:0009279,GO:0010876,GO:0015920,GO:0016020,GO:0017089,GO:0019867,GO:0030288,GO:0030312,GO:0030313,GO:0031975,GO:0033036,GO:0042597,GO:0042802,GO:0044462,GO:0044464,GO:0046836,GO:0051179,GO:0051234,GO:0071702,GO:0071944,GO:1901264 - 0.0000000000000000003965 94.0
DYD1_k127_199203_28 Protein of unknown function (DUF3108) - - - 0.000000000000002324 87.0
DYD1_k127_199203_29 Involved in the assembly of lipopolysaccharide (LPS). Required for the translocation of LPS from the inner membrane to the outer membrane. Facilitates the transfer of LPS from the inner membrane to the periplasmic protein LptA. Could be a docking site for LptA K11719 - - 0.000000001654 69.0
DYD1_k127_199203_3 General (non sugar-specific) component of the phosphoenolpyruvate-dependent sugar phosphotransferase system (sugar PTS). This major carbohydrate active-transport system catalyzes the phosphorylation of incoming sugar substrates concomitantly with their translocation across the cell membrane. Enzyme I transfers the phosphoryl group from phosphoenolpyruvate (PEP) to the phosphoryl carrier protein (HPr) K08483 - 2.7.3.9 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000583 479.0
DYD1_k127_199203_4 The transhydrogenation between NADH and NADP is coupled to respiration and ATP hydrolysis and functions as a proton pump across the membrane K00325 - 1.6.1.2 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000136 447.0
DYD1_k127_199203_5 Phosphorylase superfamily K00757,K01241 - 2.4.2.3,3.2.2.4 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005939 436.0
DYD1_k127_199203_6 PFAM AIR synthase related protein K01933 - 6.3.3.1 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001122 432.0
DYD1_k127_199203_7 Arabinose 5-phosphate isomerase K06041 - 5.3.1.13 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009874 419.0
DYD1_k127_199203_8 transferase activity, transferring glycosyl groups - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003205 442.0
DYD1_k127_199203_9 peptidase M48, Ste24p - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004977 413.0
DYD1_k127_2025211_0 4-hydroxyphenylpyruvate dioxygenase K00457 - 1.13.11.27 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003933 448.0
DYD1_k127_2025211_1 Heme-dependent dioxygenase that catalyzes the oxidative cleavage of the L-tryptophan (L-Trp) pyrrole ring and converts L- tryptophan to N-formyl-L-kynurenine. Catalyzes the oxidative cleavage of the indole moiety K00453 GO:0003674,GO:0003824,GO:0004833,GO:0005488,GO:0006082,GO:0006084,GO:0006139,GO:0006163,GO:0006520,GO:0006568,GO:0006569,GO:0006576,GO:0006586,GO:0006637,GO:0006725,GO:0006732,GO:0006753,GO:0006790,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0009056,GO:0009063,GO:0009072,GO:0009074,GO:0009117,GO:0009150,GO:0009259,GO:0009308,GO:0009310,GO:0009987,GO:0016043,GO:0016054,GO:0016491,GO:0016701,GO:0016702,GO:0019439,GO:0019441,GO:0019442,GO:0019637,GO:0019693,GO:0019752,GO:0020037,GO:0022607,GO:0033865,GO:0033875,GO:0034032,GO:0034641,GO:0035383,GO:0042180,GO:0042402,GO:0042430,GO:0042436,GO:0042537,GO:0043436,GO:0043603,GO:0043933,GO:0044085,GO:0044106,GO:0044237,GO:0044238,GO:0044248,GO:0044270,GO:0044281,GO:0044282,GO:0046218,GO:0046395,GO:0046483,GO:0046700,GO:0046906,GO:0048037,GO:0051186,GO:0051213,GO:0051259,GO:0051260,GO:0051262,GO:0051289,GO:0055086,GO:0055114,GO:0065003,GO:0070189,GO:0071704,GO:0071840,GO:0072521,GO:0097159,GO:1901135,GO:1901360,GO:1901361,GO:1901363,GO:1901564,GO:1901565,GO:1901575,GO:1901605,GO:1901606 1.13.11.11 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005105 411.0
DYD1_k127_2025211_2 homogentisate 1,2-dioxygenase K00451 - 1.13.11.5 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001456 302.0
DYD1_k127_2025211_3 MarR family transcriptional regulator - - - 0.000000000000000000000000000000003391 137.0
DYD1_k127_2044449_0 Serine dehydratase K01752 - 4.3.1.17 5.1e-212 667.0
DYD1_k127_2044449_1 Dak2 K07030 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006652 419.0
DYD1_k127_2044449_2 Catalyzes the transfer of an acyl group from acyl- phosphate (acyl-PO(4)) to glycerol-3-phosphate (G3P) to form lysophosphatidic acid (LPA). This enzyme utilizes acyl-phosphate as fatty acyl donor, but not acyl-CoA or acyl-ACP K08591 - 2.3.1.15 0.000000000000000000000000000000291 129.0
DYD1_k127_2044449_3 thiol-disulfide isomerase and - - - 0.0000000000003501 72.0
DYD1_k127_2047136_0 belongs to the aldehyde dehydrogenase family K10217 - 1.2.1.32,1.2.1.85 3.36e-257 801.0
DYD1_k127_2047136_1 Amidohydrolase family K06015 - 3.5.1.81 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002382 532.0
DYD1_k127_2047136_2 ABC-type multidrug transport system, permease component K01992 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001062 394.0
DYD1_k127_2047136_3 ABC transporter K01990 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001611 362.0
DYD1_k127_2047136_4 multidrug resistance efflux pump K01993 - - 0.000000000000000000000000000000000000000000000000000000000000000004229 237.0
DYD1_k127_2047136_5 aminoglycoside phosphotransferase - - - 0.00000000000000000000000000000000000003307 145.0
DYD1_k127_2047136_6 Bacterial regulatory proteins, tetR family - - - 0.000000000000000000000000000002731 128.0
DYD1_k127_2056012_0 Catalyzes the synthesis of the hydroxymethylpyrimidine phosphate (HMP-P) moiety of thiamine from aminoimidazole ribotide (AIR) in a radical S-adenosyl-L-methionine (SAM)-dependent reaction K03147 GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006725,GO:0006766,GO:0006767,GO:0006772,GO:0006790,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009110,GO:0009228,GO:0009987,GO:0017144,GO:0018130,GO:0019438,GO:0034641,GO:0042364,GO:0042723,GO:0042724,GO:0044237,GO:0044249,GO:0044271,GO:0044272,GO:0044281,GO:0044283,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0071704,GO:0072527,GO:0072528,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576 4.1.99.17 0.0 1047.0
DYD1_k127_2056012_1 Glycyl-tRNA synthetase beta subunit K01879 - 6.1.1.14 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004124 561.0
DYD1_k127_2056012_10 COG1538 Outer membrane protein K12340 - - 0.0000000000000000000000000000000000000000000000009278 186.0
DYD1_k127_2056012_11 Thioesterase - - - 0.00000000000000000000000000000000000000000000001498 184.0
DYD1_k127_2056012_12 of membrane protease K07340 - - 0.0000000000001346 75.0
DYD1_k127_2056012_13 - - - - 0.0000000002906 65.0
DYD1_k127_2056012_14 Protein of unknown function (DUF2845) - - - 0.00000003136 59.0
DYD1_k127_2056012_15 Protein of unknown function (DUF3379) - - - 0.0005518 50.0
DYD1_k127_2056012_2 glycyl-tRNA synthetase alpha subunit K01878 - 6.1.1.14 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003944 499.0
DYD1_k127_2056012_3 protein conserved in bacteria (DUF2333) - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000108 390.0
DYD1_k127_2056012_4 Catalyzes carboxymethyl transfer from carboxy-S- adenosyl-L-methionine (Cx-SAM) to 5-hydroxyuridine (ho5U) to form 5-carboxymethoxyuridine (cmo5U) at position 34 in tRNAs K15257 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001033 325.0
DYD1_k127_2056012_5 Catalyzes the conversion of S-adenosyl-L-methionine (SAM) to carboxy-S-adenosyl-L-methionine (Cx-SAM) K15256 - - 0.00000000000000000000000000000000000000000000000000000000000000000000004261 248.0
DYD1_k127_2056012_6 N-acetylmuramoyl-L-alanine amidase K01447 - 3.5.1.28 0.0000000000000000000000000000000000000000000000000000000000000000000001477 243.0
DYD1_k127_2056012_7 PFAM protein-L-isoaspartate(D-aspartate) O-methyltransferase K00573 - 2.1.1.77 0.0000000000000000000000000000000000000000000000000000000000000000001159 238.0
DYD1_k127_2056012_8 Catalyzes the transfer of the ammonia group from glutamine to a new carbon-nitrogen group K01951 - 6.3.5.2 0.000000000000000000000000000000000000000000000000000000000000001324 230.0
DYD1_k127_2056012_9 Sigma-70 region 2 - - - 0.00000000000000000000000000000000000000000000000001279 186.0
DYD1_k127_2060598_0 DNA polymerase III alpha subunit K02337 - 2.7.7.7 7.131e-308 963.0
DYD1_k127_2060598_1 DNA polymerase III is a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria. This DNA polymerase also exhibits 3' to 5' exonuclease activity K02343 - 2.7.7.7 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000294 501.0
DYD1_k127_2060598_10 - - - - 0.0000002378 55.0
DYD1_k127_2060598_2 PFAM Exonuclease K01141 - 3.1.11.1 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003662 489.0
DYD1_k127_2060598_3 Acyl-CoA thioesterase K10805 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005943 337.0
DYD1_k127_2060598_4 May play a role in DNA repair. It seems to be involved in an RecBC-independent recombinational process of DNA repair. It may act with RecF and RecO K06187 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000123 288.0
DYD1_k127_2060598_5 Has an important function as a repair enzyme for proteins that have been inactivated by oxidation. Catalyzes the reversible oxidation-reduction of methionine sulfoxide in proteins to methionine K07304 - 1.8.4.11 0.0000000000000000000000000000000000000000000000000000000000000005292 222.0
DYD1_k127_2060598_6 COG4240 Predicted kinase K15918 - 2.7.1.31 0.00000000000000000000000000000000000000000000000002248 191.0
DYD1_k127_2060598_7 COG0741 Soluble lytic murein transglycosylase and related regulatory proteins (some contain LysM invasin domains) - - - 0.0000000000000000000000000000000000000000000000003363 184.0
DYD1_k127_2060598_8 Binds to DNA and alters its conformation. May be involved in regulation of gene expression, nucleoid organization and DNA protection K09747 - - 0.0000000000000000000000000000000002139 134.0
DYD1_k127_2060598_9 COG1555 DNA uptake protein and related DNA-binding proteins K02237 GO:0005575,GO:0005623,GO:0030288,GO:0030313,GO:0031975,GO:0042597,GO:0044464 - 0.000000000000000001251 91.0
DYD1_k127_207106_0 Beta-lactamase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008327 432.0
DYD1_k127_207106_1 Circularly permuted ATP-grasp type 2 - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005291 337.0
DYD1_k127_207106_2 Beta-lactamase - - - 0.000000000000000000000000000000000000000000000000000000000000000001391 257.0
DYD1_k127_207106_3 FCD domain - - - 0.0000000000000000000000000000000000006355 147.0
DYD1_k127_2077092_0 Insulinase (Peptidase family M16) K07263 - - 0.0 1150.0
DYD1_k127_2077092_1 Pyruvate phosphate dikinase, PEP/pyruvate binding domain - - - 5.165e-230 745.0
DYD1_k127_2077092_2 Outer membrane receptor proteins mostly Fe transport K02014 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000842 565.0
DYD1_k127_2077092_3 Beta-lactamase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004712 424.0
DYD1_k127_2077092_4 Beta-lactamase enzyme family K17836 - 3.5.2.6 0.00000000000000000000000000000000000000000000000000000000000000000000000000000001112 279.0
DYD1_k127_2077092_5 TLC ATP/ADP transporter - - - 0.0000000000000000000000000000000000000000000000000000000000000006473 240.0
DYD1_k127_2077092_6 Beta-lactamase enzyme family K17836 - 3.5.2.6 0.00000000000000000000000000000000000000000000000000000006906 203.0
DYD1_k127_2085470_0 Mycolic acid cyclopropane synthetase K00574 - 2.1.1.79 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001159 464.0
DYD1_k127_2085470_1 PFAM FAD binding domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000003108 302.0
DYD1_k127_2085470_2 Glutathione-dependent formaldehyde-activating enzyme - - - 0.0000000000000000000000000000000000000000000000000000000000000000000008244 244.0
DYD1_k127_2085470_3 Transcriptional regulatory protein, C terminal - - - 0.0000000000000000000000000000000000000000000009315 186.0
DYD1_k127_2085470_4 Bacterial antitoxin of type II TA system, VapB - - - 0.0004566 43.0
DYD1_k127_209658_0 COG0491 Zn-dependent hydrolases, including glyoxylases - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001592 488.0
DYD1_k127_209658_1 PFAM glycoside hydrolase, family 77 K00705 - 2.4.1.25 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001172 469.0
DYD1_k127_209658_2 Bacterial protein of unknown function (DUF885) - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006861 310.0
DYD1_k127_209658_3 Belongs to the Orn Lys Arg decarboxylase class-II family K01581 - 4.1.1.17 0.00000000000000000000000000000000000000000000000000000000000000000000000000001247 274.0
DYD1_k127_209658_4 Belongs to the bacterial glucokinase family K00845 GO:0003674,GO:0003824,GO:0004340,GO:0004396,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005975,GO:0006082,GO:0006090,GO:0006091,GO:0006096,GO:0006139,GO:0006163,GO:0006164,GO:0006165,GO:0006725,GO:0006732,GO:0006733,GO:0006753,GO:0006754,GO:0006757,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0009056,GO:0009058,GO:0009108,GO:0009117,GO:0009123,GO:0009124,GO:0009126,GO:0009127,GO:0009132,GO:0009135,GO:0009141,GO:0009142,GO:0009144,GO:0009145,GO:0009150,GO:0009152,GO:0009156,GO:0009161,GO:0009165,GO:0009166,GO:0009167,GO:0009168,GO:0009179,GO:0009185,GO:0009199,GO:0009201,GO:0009205,GO:0009206,GO:0009259,GO:0009260,GO:0009987,GO:0016052,GO:0016053,GO:0016301,GO:0016310,GO:0016740,GO:0016772,GO:0016773,GO:0017144,GO:0018130,GO:0019200,GO:0019359,GO:0019362,GO:0019363,GO:0019438,GO:0019439,GO:0019637,GO:0019693,GO:0019752,GO:0032787,GO:0034404,GO:0034641,GO:0034654,GO:0034655,GO:0042866,GO:0043436,GO:0044237,GO:0044238,GO:0044248,GO:0044249,GO:0044262,GO:0044270,GO:0044271,GO:0044281,GO:0044283,GO:0044424,GO:0044444,GO:0044464,GO:0046031,GO:0046034,GO:0046390,GO:0046394,GO:0046434,GO:0046483,GO:0046496,GO:0046700,GO:0046835,GO:0046939,GO:0051156,GO:0051186,GO:0051188,GO:0055086,GO:0071704,GO:0072330,GO:0072521,GO:0072522,GO:0072524,GO:0072525,GO:0090407,GO:1901135,GO:1901137,GO:1901292,GO:1901293,GO:1901360,GO:1901361,GO:1901362,GO:1901564,GO:1901566,GO:1901575,GO:1901576 2.7.1.2 0.00000000000000000000000000000000000000000000000000000000000002474 226.0
DYD1_k127_209658_5 TIGRFAM amidase, hydantoinase carbamoylase family K06016 - 3.5.1.6,3.5.1.87 0.0000000000000000000000000000000000000000000000000001869 189.0
DYD1_k127_2104941_0 acyl-CoA dehydrogenase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004814 559.0
DYD1_k127_2104941_1 PFAM alpha beta hydrolase fold - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008491 334.0
DYD1_k127_2104941_2 acyl-CoA dehydrogenase K00249 - 1.3.8.7 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008603 316.0
DYD1_k127_2104941_3 Transcriptional regulatory protein, C terminal - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000002094 316.0
DYD1_k127_2104941_4 Sulfatase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000003479 293.0
DYD1_k127_2104941_6 TIR domain - - - 0.0000000000000000745 95.0
DYD1_k127_2133287_0 Acetyl-CoA carboxylase, carboxyltransferase component (subunits alpha and beta) K01969 - 6.4.1.4 1.34e-273 848.0
DYD1_k127_2133287_1 COG0119 Isopropylmalate homocitrate citramalate synthases K01640 - 4.1.3.4 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006492 402.0
DYD1_k127_2133287_2 enoyl-CoA hydratase K13766 - 4.2.1.18 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006484 320.0
DYD1_k127_2133287_3 Belongs to the short-chain dehydrogenases reductases (SDR) family - - - 0.000000000000000000001191 98.0
DYD1_k127_2162788_0 Efflux pump membrane transporter K19585 - - 8.522e-311 964.0
DYD1_k127_2162788_1 Outer membrane efflux protein K18300 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007524 493.0
DYD1_k127_2162788_2 PFAM ABC transporter - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007413 477.0
DYD1_k127_2162788_3 Transport permease protein - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001385 402.0
DYD1_k127_2162788_4 Phosphoenolpyruvate phosphomutase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000009662 294.0
DYD1_k127_2162788_5 Bacteriocin-protection, YdeI or OmpD-Associated - - - 0.000000000000000000000000000000000000000008531 159.0
DYD1_k127_2162788_6 Belongs to the CDP-alcohol phosphatidyltransferase class-I family K00995,K08744 GO:0006629,GO:0006644,GO:0006650,GO:0006793,GO:0006796,GO:0008150,GO:0008152,GO:0008610,GO:0008654,GO:0009058,GO:0009987,GO:0019637,GO:0044237,GO:0044238,GO:0044249,GO:0044255,GO:0045017,GO:0046474,GO:0046486,GO:0071704,GO:0090407,GO:1901576 2.7.8.41,2.7.8.5 0.0000000000000000000000000000000000004332 145.0
DYD1_k127_2162788_7 DUF167 - - - 0.0000000000000001785 82.0
DYD1_k127_2162788_8 amine dehydrogenase activity - - - 0.000000000000001264 78.0
DYD1_k127_2178177_0 Belongs to the class-II aminoacyl-tRNA synthetase family K04567 - 6.1.1.6 5.227e-197 626.0
DYD1_k127_2178177_1 Ion channel K10716 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001298 460.0
DYD1_k127_2178177_2 Peptide chain release factor 2 directs the termination of translation in response to the peptide chain termination codons UGA and UAA K02836 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001212 422.0
DYD1_k127_2178177_3 Belongs to the peptidase M16 family K07263 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000186 321.0
DYD1_k127_2178177_4 amidohydrolase K11206,K13566 GO:0003674,GO:0003824,GO:0005575,GO:0005623,GO:0005886,GO:0016020,GO:0016787,GO:0016810,GO:0016811,GO:0044464,GO:0050152,GO:0071944,GO:0106008 3.5.1.3 0.0000000000000000000000000000000000000000000000000000000000000000000000002131 269.0
DYD1_k127_2178177_5 - - - - 0.000000000000000000000000000000000000000000000003754 175.0
DYD1_k127_2256908_0 Lysin motif K08307 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000148 557.0
DYD1_k127_2256908_1 Domain of unknown function (DUF1611_N) Rossmann-like domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001204 391.0
DYD1_k127_2256908_2 Belongs to the mandelate racemase muconate lactonizing enzyme family K19802 GO:0000287,GO:0003674,GO:0003824,GO:0005488,GO:0006518,GO:0006807,GO:0008150,GO:0008152,GO:0009987,GO:0016853,GO:0016854,GO:0034641,GO:0043167,GO:0043169,GO:0043603,GO:0044237,GO:0046872,GO:0071704,GO:1901564 5.1.1.20 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000454 340.0
DYD1_k127_2256908_3 Dihydrolipoamide acetyltransferase component of pyruvate dehydrogenase complex K00627 - 2.3.1.12 0.000000000000000000000000000000000000000000000000000000000001924 223.0
DYD1_k127_2256908_4 Aminotransferase class-V - - - 0.0000000000000000000000000000000000000000541 157.0
DYD1_k127_2256908_5 - - - - 0.0000008977 53.0
DYD1_k127_2271493_0 Protein of unknown function (DUF1800) - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000004785 275.0
DYD1_k127_2271493_1 PQQ-like domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000002784 269.0
DYD1_k127_2271493_2 PFAM Silent information regulator protein Sir2 K12410 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000003647 260.0
DYD1_k127_2271493_3 protein conserved in bacteria - - - 0.00000000000000000000000000000000000000000000000000000000000000000001887 247.0
DYD1_k127_2271493_4 Sigma-70, region 4 K03088 - - 0.000000000000000000000000000000000000002175 152.0
DYD1_k127_2271493_5 Protein of unknown function (DUF3106) - - - 0.0000004329 61.0
DYD1_k127_2287183_0 Bacterial transferase hexapeptide (six repeats) K02617,K08279 GO:0003674,GO:0003824,GO:0006575,GO:0006577,GO:0006807,GO:0008150,GO:0008152,GO:0008735,GO:0009437,GO:0009987,GO:0016289,GO:0016787,GO:0016788,GO:0016790,GO:0016829,GO:0016835,GO:0016836,GO:0034641,GO:0044237,GO:0071704,GO:0097164,GO:1901564 - 0.00000000000000000000000000000000000000000000000000000000000000000000000000003736 263.0
DYD1_k127_2287183_1 Belongs to the anaerobic coproporphyrinogen-III oxidase family - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000153 260.0
DYD1_k127_2287183_2 - - - - 0.000000000000000000000000000005656 127.0
DYD1_k127_2287183_3 Catechol dioxygenase N terminus K03381,K04098,K15253 GO:0003674,GO:0003824,GO:0005488,GO:0005506,GO:0006725,GO:0008150,GO:0008152,GO:0008199,GO:0009056,GO:0009712,GO:0009987,GO:0016491,GO:0016701,GO:0016702,GO:0018576,GO:0018958,GO:0019114,GO:0019336,GO:0019439,GO:0019614,GO:0043167,GO:0043169,GO:0044237,GO:0044248,GO:0046872,GO:0046914,GO:0051213,GO:0055114,GO:0071704,GO:1901360,GO:1901361,GO:1901575,GO:1901615,GO:1901616 1.13.11.1,1.13.11.37 0.000000000000000000002595 95.0
DYD1_k127_232767_0 An AccC homodimer forms the biotin carboxylase subunit of the acetyl CoA carboxylase, an enzyme that catalyzes the formation of malonyl-CoA, which in turn controls the rate of fatty acid metabolism K01961 - 6.3.4.14,6.4.1.2 3.073e-228 713.0
DYD1_k127_232767_1 Peptidase S10 - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005086 479.0
DYD1_k127_232767_2 Ribosomal protein L11 methyltransferase K02687 GO:0003674,GO:0003824,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006464,GO:0006479,GO:0006480,GO:0006807,GO:0008150,GO:0008152,GO:0008168,GO:0008170,GO:0008213,GO:0008276,GO:0008757,GO:0009987,GO:0016278,GO:0016279,GO:0016740,GO:0016741,GO:0018011,GO:0018012,GO:0018022,GO:0018023,GO:0018193,GO:0018194,GO:0018205,GO:0019538,GO:0031365,GO:0032259,GO:0036211,GO:0043170,GO:0043412,GO:0043414,GO:0044237,GO:0044238,GO:0044260,GO:0044267,GO:0044424,GO:0044444,GO:0044464,GO:0071704,GO:0140096,GO:1901564 - 0.0000000000000000000000000000000000000000000000000000000000000000000000001887 258.0
DYD1_k127_232767_3 Catalyzes a trans-dehydration via an enolate intermediate K03786 - 4.2.1.10 0.00000000000000000000000000000000000000000000000002625 183.0
DYD1_k127_232767_4 Methyltransferase domain - - - 0.00000000000000000000000000000000000000000000003042 188.0
DYD1_k127_232767_5 first, biotin carboxylase catalyzes the carboxylation of the carrier protein and then the transcarboxylase transfers the carboxyl group to form malonyl-CoA K02160 - - 0.000000000000000000000000000000000000000000001385 171.0
DYD1_k127_232767_6 alkyl hydroperoxide reductase Thiol specific antioxidant Mal allergen - - - 0.000000000000001267 79.0
DYD1_k127_2344322_0 COG1960 Acyl-CoA dehydrogenases K00249 - 1.3.8.7 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006935 559.0
DYD1_k127_2344322_1 COG0577 ABC-type antimicrobial peptide transport system permease component K02004 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001178 484.0
DYD1_k127_2344322_2 Adenosine/AMP deaminase K01488 - 3.5.4.4 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001327 319.0
DYD1_k127_2344322_3 Glucose / Sorbosone dehydrogenase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000001278 306.0
DYD1_k127_2344322_4 Part of the outer membrane protein assembly complex, which is involved in assembly and insertion of beta-barrel proteins into the outer membrane - - - 0.0000000000000000000000001146 123.0
DYD1_k127_2439163_0 PFAM Protein kinase domain K12132 - 2.7.11.1 0.0000000000000000000000000000000000000000000000000000000000000000003133 261.0
DYD1_k127_2439163_1 Toxic component of a toxin-antitoxin (TA) module K07171 - - 0.00000000000000000000000000007225 120.0
DYD1_k127_2439163_2 cAMP biosynthetic process - - - 0.000000000000000000000008978 119.0
DYD1_k127_2439163_3 Transposase - - - 0.000000000000000000001581 94.0
DYD1_k127_2442312_0 acyl-CoA dehydrogenase K06445 - - 3.245e-269 853.0
DYD1_k127_2442312_1 NADH ubiquinone oxidoreductase subunit K00341 - 1.6.5.3 2.197e-266 835.0
DYD1_k127_2442312_10 Catalyzes the condensation reaction of fatty acid synthesis by the addition to an acyl acceptor of two carbons from malonyl-ACP K00646,K09458 GO:0003674,GO:0003824,GO:0004312,GO:0004315,GO:0016740,GO:0016746,GO:0016747,GO:0033817 2.3.1.179 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001661 547.0
DYD1_k127_2442312_11 GTPase that plays an essential role in the late steps of ribosome biogenesis K03977 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000536 509.0
DYD1_k127_2442312_12 histidyl-tRNA synthetase K01892 GO:0003674,GO:0003824,GO:0004812,GO:0004821,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006082,GO:0006139,GO:0006399,GO:0006412,GO:0006418,GO:0006427,GO:0006518,GO:0006520,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0016070,GO:0016874,GO:0016875,GO:0019538,GO:0019752,GO:0034641,GO:0034645,GO:0034660,GO:0043038,GO:0043039,GO:0043043,GO:0043170,GO:0043436,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044281,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0071704,GO:0090304,GO:0140098,GO:0140101,GO:1901360,GO:1901564,GO:1901566,GO:1901576 6.1.1.21 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007455 505.0
DYD1_k127_2442312_13 Specifically methylates position 2 of adenine 2503 in 23S rRNA and position 2 of adenine 37 in tRNAs K06941 GO:0000154,GO:0001510,GO:0003674,GO:0003824,GO:0006139,GO:0006364,GO:0006396,GO:0006399,GO:0006400,GO:0006725,GO:0006807,GO:0008033,GO:0008150,GO:0008152,GO:0008168,GO:0008173,GO:0008175,GO:0008649,GO:0008757,GO:0009451,GO:0009987,GO:0010467,GO:0016070,GO:0016072,GO:0016740,GO:0016741,GO:0022613,GO:0030488,GO:0031167,GO:0032259,GO:0034470,GO:0034641,GO:0034660,GO:0042254,GO:0043170,GO:0043412,GO:0043414,GO:0044085,GO:0044237,GO:0044238,GO:0044260,GO:0046483,GO:0070475,GO:0071704,GO:0071840,GO:0090304,GO:0140098,GO:0140101,GO:0140102,GO:1901360 2.1.1.192 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008201 486.0
DYD1_k127_2442312_14 Protease involved in proteolytic processing of the antibiotic Microcin B17 and in sensitivity to the DNA gyrase inhibitor LetD K03592 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001404 488.0
DYD1_k127_2442312_15 NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient. This subunit may bind ubiquinone K00337 - 1.6.5.3 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003061 462.0
DYD1_k127_2442312_16 membrane - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002682 487.0
DYD1_k127_2442312_17 Catalyzes the condensation reaction of fatty acid synthesis by the addition to an acyl acceptor of two carbons from malonyl-ACP. Catalyzes the first condensation reaction which initiates fatty acid synthesis and may therefore play a role in governing the total rate of fatty acid production. Possesses both acetoacetyl-ACP synthase and acetyl transacylase activities. Its substrate specificity determines the biosynthesis of branched- chain and or straight-chain of fatty acids K00648 GO:0003674,GO:0003824,GO:0004312,GO:0004315,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006082,GO:0006629,GO:0006631,GO:0006633,GO:0008150,GO:0008152,GO:0008610,GO:0009058,GO:0009987,GO:0016053,GO:0016740,GO:0016746,GO:0016747,GO:0019752,GO:0032787,GO:0033818,GO:0043436,GO:0044237,GO:0044238,GO:0044249,GO:0044255,GO:0044281,GO:0044283,GO:0044424,GO:0044444,GO:0044464,GO:0046394,GO:0071704,GO:0072330,GO:1901576 2.3.1.180 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002885 447.0
DYD1_k127_2442312_18 component I K01657 - 4.1.3.27 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002272 407.0
DYD1_k127_2442312_19 Patatin-like phospholipase K07001 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006275 377.0
DYD1_k127_2442312_2 NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient K00333 - 1.6.5.3 3.513e-244 758.0
DYD1_k127_2442312_20 Catalyzes the oxidation of 5,10- methylenetetrahydrofolate to 5,10-methenyltetrahydrofolate and then the hydrolysis of 5,10-methenyltetrahydrofolate to 10- formyltetrahydrofolate K01491 GO:0003674,GO:0003824,GO:0004477,GO:0004488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006730,GO:0008150,GO:0008152,GO:0009987,GO:0016491,GO:0016645,GO:0016646,GO:0016787,GO:0016810,GO:0016814,GO:0019238,GO:0044237,GO:0044281,GO:0044424,GO:0044444,GO:0044464,GO:0055114 1.5.1.5,3.5.4.9 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001068 357.0
DYD1_k127_2442312_21 COG0331 (acyl-carrier-protein) S-malonyltransferase K00645 GO:0003674,GO:0003824,GO:0004312,GO:0004314,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006082,GO:0006629,GO:0006631,GO:0006633,GO:0008150,GO:0008152,GO:0008610,GO:0009058,GO:0009987,GO:0016053,GO:0016417,GO:0016419,GO:0016420,GO:0016740,GO:0016746,GO:0016747,GO:0019752,GO:0032787,GO:0043436,GO:0044237,GO:0044238,GO:0044249,GO:0044255,GO:0044281,GO:0044283,GO:0044424,GO:0044444,GO:0044464,GO:0046394,GO:0071704,GO:0072330,GO:1901576 2.3.1.39 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002022 350.0
DYD1_k127_2442312_22 NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient K00331 - 1.6.5.3 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001195 324.0
DYD1_k127_2442312_23 Part of the outer membrane protein assembly complex, which is involved in assembly and insertion of beta-barrel proteins into the outer membrane K17713 GO:0003674,GO:0003824,GO:0008150,GO:0008152,GO:0016491,GO:0055114 - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004359 326.0
DYD1_k127_2442312_24 COG1028 Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) K00059 GO:0000166,GO:0003674,GO:0003824,GO:0004312,GO:0004316,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006082,GO:0006629,GO:0006631,GO:0006633,GO:0006732,GO:0006766,GO:0006767,GO:0006768,GO:0006790,GO:0006807,GO:0008150,GO:0008152,GO:0008610,GO:0009058,GO:0009102,GO:0009108,GO:0009110,GO:0009987,GO:0016053,GO:0016491,GO:0016614,GO:0016616,GO:0016740,GO:0016746,GO:0016747,GO:0017144,GO:0018130,GO:0019752,GO:0030497,GO:0032787,GO:0034641,GO:0036094,GO:0042364,GO:0042802,GO:0043436,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044255,GO:0044271,GO:0044272,GO:0044281,GO:0044283,GO:0044424,GO:0044444,GO:0044464,GO:0046394,GO:0046483,GO:0048037,GO:0050661,GO:0050662,GO:0051186,GO:0051188,GO:0055114,GO:0071704,GO:0072330,GO:0097159,GO:1901265,GO:1901360,GO:1901362,GO:1901363,GO:1901564,GO:1901566,GO:1901576 1.1.1.100 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000001508 302.0
DYD1_k127_2442312_25 Involved in the gluconeogenesis. Catalyzes stereospecifically the conversion of dihydroxyacetone phosphate (DHAP) to D-glyceraldehyde-3-phosphate (G3P) K01803 - 5.3.1.1 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000003302 300.0
DYD1_k127_2442312_26 NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient K00332 GO:0003674,GO:0003824,GO:0003954,GO:0006091,GO:0008137,GO:0008150,GO:0008152,GO:0009987,GO:0015980,GO:0016491,GO:0016651,GO:0016655,GO:0044237,GO:0045333,GO:0050136,GO:0055114 1.6.5.3 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000004481 300.0
DYD1_k127_2442312_27 Catalyzes the reversible formation of acyl-phosphate (acyl-PO(4)) from acyl- acyl-carrier-protein (acyl-ACP). This enzyme utilizes acyl-ACP as fatty acyl donor, but not acyl-CoA K03621 - 2.3.1.15 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000004165 296.0
DYD1_k127_2442312_28 NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient K00338 - 1.6.5.3 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000009772 276.0
DYD1_k127_2442312_29 polyphosphate kinase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000001621 266.0
DYD1_k127_2442312_3 TIGRFAM NADH-quinone oxidoreductase, chain G K00336 - 1.6.5.3 1.219e-241 773.0
DYD1_k127_2442312_30 NADH dehydrogenase K00334 - 1.6.5.3 0.000000000000000000000000000000000000000000000000000000000000000000005203 244.0
DYD1_k127_2442312_31 Major role in the synthesis of nucleoside triphosphates other than ATP. The ATP gamma phosphate is transferred to the NDP beta phosphate via a ping-pong mechanism, using a phosphorylated active-site intermediate K00940 - 2.7.4.6 0.00000000000000000000000000000000000000000000000000000000000000001017 226.0
DYD1_k127_2442312_32 Processivity clamp loader gamma complex DNA pol III C-term K02340 GO:0005575,GO:0005622,GO:0005623,GO:0006139,GO:0006259,GO:0006260,GO:0006261,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009360,GO:0009987,GO:0032991,GO:0034641,GO:0034645,GO:0042575,GO:0043170,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044424,GO:0044464,GO:0046483,GO:0061695,GO:0071704,GO:0090304,GO:1901360,GO:1901576,GO:1902494,GO:1990234 2.7.7.7 0.00000000000000000000000000000000000000000000000000000000000000001661 237.0
DYD1_k127_2442312_33 Catalyzes the reversible adenylation of nicotinate mononucleotide (NaMN) to nicotinic acid adenine dinucleotide (NaAD) K00969 - 2.7.7.18 0.00000000000000000000000000000000000000000000000000000000000000134 224.0
DYD1_k127_2442312_34 Belongs to the complex I subunit 6 family K00339 - 1.6.5.3 0.000000000000000000000000000000000000000000000000000000000000012 221.0
DYD1_k127_2442312_35 - - - - 0.000000000000000000000000000000000000000000000000000000000006368 217.0
DYD1_k127_2442312_36 type IV pilus biogenesis stability protein PilW K02656 - - 0.00000000000000000000000000000000000000000000000002205 199.0
DYD1_k127_2442312_37 Belongs to the glutathione peroxidase family K00432 - 1.11.1.9 0.000000000000000000000000000000000000000000000001293 184.0
DYD1_k127_2442312_38 Tripartite tricarboxylate transporter family receptor K07795 - - 0.000000000000000000000000000000000000000000000001429 184.0
DYD1_k127_2442312_39 Specifically methylates the pseudouridine at position 1915 (m3Psi1915) in 23S rRNA K00783 - 2.1.1.177 0.000000000000000000000000000000000000000000000001441 179.0
DYD1_k127_2442312_4 NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain K00335 - 1.6.5.3 9.087e-234 728.0
DYD1_k127_2442312_40 TIGRFAM maf protein K06287 - - 0.000000000000000000000000000000000000000000000001754 180.0
DYD1_k127_2442312_41 Maf-like protein K06287 - - 0.000000000000000000000000000000000000000000002973 188.0
DYD1_k127_2442312_42 NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient K00340 GO:0003674,GO:0003824,GO:0003954,GO:0005575,GO:0005623,GO:0005886,GO:0008137,GO:0008150,GO:0008152,GO:0016020,GO:0016491,GO:0016651,GO:0016655,GO:0030964,GO:0032991,GO:0044425,GO:0044459,GO:0044464,GO:0045271,GO:0045272,GO:0050136,GO:0055114,GO:0070469,GO:0070470,GO:0071944,GO:0098796,GO:0098797,GO:0098803,GO:1902494,GO:1990204 1.6.5.3 0.000000000000000000000000000000000000007607 162.0
DYD1_k127_2442312_43 Functions as a ribosomal silencing factor. Interacts with ribosomal protein L14 (rplN), blocking formation of intersubunit bridge B8. Prevents association of the 30S and 50S ribosomal subunits and the formation of functional ribosomes, thus repressing translation K09710 - - 0.0000000000000000000000000000000000001684 146.0
DYD1_k127_2442312_44 Carrier of the growing fatty acid chain in fatty acid biosynthesis K02078 GO:0000035,GO:0000036,GO:0003674,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005975,GO:0006082,GO:0006629,GO:0006631,GO:0006633,GO:0006643,GO:0006644,GO:0006664,GO:0006793,GO:0006796,GO:0008150,GO:0008152,GO:0008610,GO:0008654,GO:0009058,GO:0009245,GO:0009247,GO:0009311,GO:0009312,GO:0009987,GO:0016051,GO:0016053,GO:0019637,GO:0019752,GO:0019842,GO:0031177,GO:0032787,GO:0033218,GO:0036094,GO:0043167,GO:0043168,GO:0043436,GO:0044237,GO:0044238,GO:0044249,GO:0044255,GO:0044281,GO:0044283,GO:0044424,GO:0044444,GO:0044464,GO:0044620,GO:0046394,GO:0046467,GO:0046493,GO:0048037,GO:0051192,GO:0071704,GO:0072330,GO:0072341,GO:0090407,GO:0140104,GO:1901135,GO:1901137,GO:1901269,GO:1901271,GO:1901576,GO:1903509 - 0.0000000000000000000000000000000001633 134.0
DYD1_k127_2442312_45 Domain of unknown function (DUF4115) K15539 - - 0.00000000000000000000000000234 123.0
DYD1_k127_2442312_46 protein conserved in bacteria - - - 0.000000000000000000000000005546 120.0
DYD1_k127_2442312_47 Belongs to the bacterial ribosomal protein bL32 family K02911 - - 0.000000000000000000000005982 102.0
DYD1_k127_2442312_48 ACR protein K07040 - - 0.0000000000000000000002198 104.0
DYD1_k127_2442312_49 PFAM Preprotein translocase SecG subunit K03075 - - 0.00000000000000001323 90.0
DYD1_k127_2442312_5 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain K01782 - 1.1.1.35,4.2.1.17,5.1.2.3 7.682e-222 706.0
DYD1_k127_2442312_6 modulator of DNA gyrase K03568 - - 1.097e-207 656.0
DYD1_k127_2442312_7 Involved in the processing of the 5'end of 16S rRNA K08301 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003367 592.0
DYD1_k127_2442312_8 TIGRFAM proton-translocating NADH-quinone oxidoreductase, chain M K00342 - 1.6.5.3 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001385 564.0
DYD1_k127_2442312_9 Belongs to the thiolase family K00626,K00632 - 2.3.1.16,2.3.1.9 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003572 551.0
DYD1_k127_2543743_0 Phosphoribosylformylglycinamidine synthase involved in the purines biosynthetic pathway. Catalyzes the ATP-dependent conversion of formylglycinamide ribonucleotide (FGAR) and glutamine to yield formylglycinamidine ribonucleotide (FGAM) and glutamate K01952 GO:0000166,GO:0003674,GO:0003824,GO:0004642,GO:0005488,GO:0005524,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006082,GO:0006139,GO:0006163,GO:0006164,GO:0006188,GO:0006189,GO:0006520,GO:0006541,GO:0006725,GO:0006753,GO:0006793,GO:0006796,GO:0006807,GO:0008144,GO:0008150,GO:0008152,GO:0009058,GO:0009064,GO:0009117,GO:0009123,GO:0009124,GO:0009126,GO:0009127,GO:0009150,GO:0009152,GO:0009156,GO:0009161,GO:0009165,GO:0009167,GO:0009168,GO:0009259,GO:0009260,GO:0009987,GO:0016462,GO:0016787,GO:0016817,GO:0016818,GO:0016874,GO:0016879,GO:0016884,GO:0016887,GO:0017076,GO:0017111,GO:0018130,GO:0019438,GO:0019637,GO:0019693,GO:0019752,GO:0030554,GO:0032553,GO:0032555,GO:0032559,GO:0034641,GO:0034654,GO:0035639,GO:0036094,GO:0042623,GO:0043167,GO:0043168,GO:0043436,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0044424,GO:0044444,GO:0044464,GO:0046040,GO:0046390,GO:0046483,GO:0055086,GO:0071704,GO:0072521,GO:0072522,GO:0090407,GO:0097159,GO:0097367,GO:1901135,GO:1901137,GO:1901265,GO:1901293,GO:1901360,GO:1901362,GO:1901363,GO:1901564,GO:1901566,GO:1901576,GO:1901605 6.3.5.3 0.0 1487.0
DYD1_k127_2543743_1 amino acids such as threonine, to avoid such errors, it has a posttransfer editing activity that hydrolyzes mischarged Thr-tRNA(Val) in a tRNA-dependent manner K01873 - 6.1.1.9 0.0 1239.0
DYD1_k127_2543743_10 Permease YjgP YjgQ family K07091 - - 0.0000000000000000000000000000000000000000000000000000000000000000483 237.0
DYD1_k127_2543743_11 COG0457 FOG TPR repeat - - - 0.0000000000000000000000000000000000000000000000000000000000002341 228.0
DYD1_k127_2543743_12 Required for disulfide bond formation in some periplasmic proteins. Acts by transferring its disulfide bond to other proteins and is reduced in the process K03981 - 5.3.4.1 0.000000000000000000000000000000000000000000000000000000000000516 220.0
DYD1_k127_2543743_13 Protein of unknown function (DUF3450) - - - 0.0000000000000000000000000000000000000000000000000000008861 203.0
DYD1_k127_2543743_14 PFAM MotA TolQ ExbB proton channel K03561 - - 0.0000000000000000000000000000000000000000000003373 178.0
DYD1_k127_2543743_15 Ribosomal-protein-alanine acetyltransferase K03789 - 2.3.1.128 0.0000000000000000000000000000000000000002548 163.0
DYD1_k127_2543743_16 Interacts with outer membrane receptor proteins that carry out high-affinity binding and energy dependent uptake into the periplasmic space of specific substrates. It could act to transduce energy from the cytoplasmic membrane to specific energy- requiring processes in the outer membrane, resulting in the release into the periplasm of ligands bound by these outer membrane proteins K03832 - - 0.000000000000000000000000000000000000003346 154.0
DYD1_k127_2543743_17 biopolymer transport protein K03559 - - 0.00000000000000000000000000000000002347 138.0
DYD1_k127_2543743_18 RDD family - - - 0.0000000000000000000000004531 110.0
DYD1_k127_2543743_19 - - - - 0.0000000000000000008167 95.0
DYD1_k127_2543743_2 Presumably involved in the processing and regular turnover of intracellular proteins. Catalyzes the removal of unsubstituted N-terminal amino acids from various peptides K01255 - 3.4.11.1 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002227 517.0
DYD1_k127_2543743_20 Domain of unknown function (DUF4124) - - - 0.0000002617 59.0
DYD1_k127_2543743_3 Catalyzes the attachment of proline to tRNA(Pro) in a two-step reaction proline is first activated by ATP to form Pro- AMP and then transferred to the acceptor end of tRNA(Pro). As ProRS can inadvertently accommodate and process non-cognate amino acids such as alanine and cysteine, to avoid such errors it has two additional distinct editing activities against alanine. One activity is designated as 'pretransfer' editing and involves the tRNA(Pro)-independent hydrolysis of activated Ala-AMP. The other activity is designated 'posttransfer' editing and involves deacylation of mischarged Ala-tRNA(Pro). The misacylated Cys- tRNA(Pro) is not edited by ProRS K01881 - 6.1.1.15 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000369 442.0
DYD1_k127_2543743_4 Catalyzes the attachment of proline to tRNA(Pro) in a two-step reaction proline is first activated by ATP to form Pro- AMP and then transferred to the acceptor end of tRNA(Pro). As ProRS can inadvertently accommodate and process non-cognate amino acids such as alanine and cysteine, to avoid such errors it has two additional distinct editing activities against alanine. One activity is designated as 'pretransfer' editing and involves the tRNA(Pro)-independent hydrolysis of activated Ala-AMP. The other activity is designated 'posttransfer' editing and involves deacylation of mischarged Ala-tRNA(Pro). The misacylated Cys- tRNA(Pro) is not edited by ProRS K01881 GO:0002161,GO:0003674,GO:0003824,GO:0004812,GO:0004827,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006082,GO:0006139,GO:0006399,GO:0006412,GO:0006418,GO:0006433,GO:0006450,GO:0006518,GO:0006520,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0016070,GO:0016787,GO:0016788,GO:0016874,GO:0016875,GO:0019538,GO:0019752,GO:0034641,GO:0034645,GO:0034660,GO:0043038,GO:0043039,GO:0043043,GO:0043170,GO:0043436,GO:0043603,GO:0043604,GO:0043906,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044281,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0052689,GO:0065007,GO:0065008,GO:0071704,GO:0090304,GO:0106074,GO:0140098,GO:0140101,GO:1901360,GO:1901564,GO:1901566,GO:1901576 6.1.1.15 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004517 400.0
DYD1_k127_2543743_5 PFAM MotA TolQ ExbB proton channel K03561 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003545 385.0
DYD1_k127_2543743_6 recombinase XerD K04763 GO:0000150,GO:0003674,GO:0003824,GO:0005575,GO:0005622,GO:0005623,GO:0006139,GO:0006259,GO:0006276,GO:0006310,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0008907,GO:0009009,GO:0009037,GO:0009314,GO:0009628,GO:0009987,GO:0015074,GO:0032991,GO:0034641,GO:0043170,GO:0044237,GO:0044238,GO:0044260,GO:0044424,GO:0044464,GO:0046483,GO:0048476,GO:0050896,GO:0071139,GO:0071704,GO:0090304,GO:0140097,GO:1901360 - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006225 369.0
DYD1_k127_2543743_7 Belongs to the CDP-alcohol phosphatidyltransferase class-I family K17103 - 2.7.8.8 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000008411 281.0
DYD1_k127_2543743_8 mechanosensitive ion channel - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000008752 272.0
DYD1_k127_2543743_9 overlaps another CDS with the same product name K11720 - - 0.000000000000000000000000000000000000000000000000000000000000000001615 248.0
DYD1_k127_255335_0 Amidohydrolase K07045 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006239 402.0
DYD1_k127_255335_1 Catalyzes the ATP-dependent phosphorylation of the 3- deoxy-D-manno-octulosonic acid (Kdo) residue in Kdo-lipid IV(A) at the 4-OH position K11211 - 2.7.1.166 0.00000000000000000000000000000000000000001662 162.0
DYD1_k127_255335_2 Acetyltransferase (GNAT) domain - - - 0.0000000000000000000000000003777 120.0
DYD1_k127_255335_3 - - - - 0.000000000000000000001021 104.0
DYD1_k127_255335_4 Psort location Cytoplasmic, score - - - 0.00000000008211 72.0
DYD1_k127_2553687_0 A type II topoisomerase that negatively supercoils closed circular double-stranded (ds) DNA in an ATP-dependent manner to modulate DNA topology and maintain chromosomes in an underwound state. Negative supercoiling favors strand separation, and DNA replication, transcription, recombination and repair, all of which involve strand separation. Also able to catalyze the interconversion of other topological isomers of dsDNA rings, including catenanes and knotted rings. Type II topoisomerases break and join 2 DNA strands simultaneously in an ATP-dependent manner K02469 - 5.99.1.3 0.0 1225.0
DYD1_k127_2553687_1 TIGRFAM isocitrate dehydrogenase, NADP-dependent K00031 - 1.1.1.42 4.567e-209 653.0
DYD1_k127_2553687_2 protein conserved in bacteria - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000002452 298.0
DYD1_k127_2553687_3 Hydrolyzes the pyrophosphate bond of UDP-2,3- diacylglucosamine to yield 2,3-diacylglucosamine 1-phosphate (lipid X) and UMP by catalyzing the attack of water at the alpha-P atom. Involved in the biosynthesis of lipid A, a phosphorylated glycolipid that anchors the lipopolysaccharide to the outer membrane of the cell K03269 - 3.6.1.54 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000007321 287.0
DYD1_k127_2553687_4 Methyltransferase domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000001006 276.0
DYD1_k127_2553687_5 PPIases accelerate the folding of proteins. It catalyzes the cis-trans isomerization of proline imidic peptide bonds in oligopeptides K01802,K03767,K03768 GO:0000413,GO:0003674,GO:0003755,GO:0003824,GO:0005575,GO:0005623,GO:0006464,GO:0006807,GO:0008150,GO:0008152,GO:0009987,GO:0016853,GO:0016859,GO:0018193,GO:0018208,GO:0019538,GO:0030288,GO:0030313,GO:0031975,GO:0036211,GO:0042597,GO:0043170,GO:0043412,GO:0044237,GO:0044238,GO:0044260,GO:0044267,GO:0044464,GO:0071704,GO:0140096,GO:1901564 5.2.1.8 0.000000000000000000000000000000000000000000000000000002384 201.0
DYD1_k127_2553687_6 Peroxiredoxin - - - 0.0000000000000000000119 91.0
DYD1_k127_2649259_0 COG0277 FAD FMN-containing dehydrogenases K00104 - 1.1.3.15 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001055 559.0
DYD1_k127_2649259_1 Putative outer membrane beta-barrel porin, MtrB/PioB - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006217 376.0
DYD1_k127_2649259_2 Berberine and berberine like - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007473 347.0
DYD1_k127_2649259_3 cytochrome C family protein - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002337 337.0
DYD1_k127_2649259_4 Ethylbenzene dehydrogenase - - - 0.000000000000000000000000000000000000000000000000000000000009386 218.0
DYD1_k127_2649259_5 cytochrome c-type protein K02569 - - 0.000000000000000000000000000000000000000000000000000001518 198.0
DYD1_k127_2649259_6 Fructosamine kinase - - - 0.000000000000000000000000000000000000000000000001844 177.0
DYD1_k127_2655850_0 Chemotaxis protein histidine kinase and related kinases K02487,K06596 - - 1.564e-281 931.0
DYD1_k127_2655850_1 chemotaxis protein K02660 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004665 505.0
DYD1_k127_2655850_10 chemotaxis signal transduction protein K06598 - - 0.0000000000000000000000006368 114.0
DYD1_k127_2655850_2 Belongs to the prokaryotic GSH synthase family K01920 GO:0003674,GO:0003824,GO:0004363,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006518,GO:0006575,GO:0006749,GO:0006750,GO:0006790,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009987,GO:0016874,GO:0016879,GO:0016881,GO:0019184,GO:0034641,GO:0042398,GO:0043043,GO:0043603,GO:0043604,GO:0044237,GO:0044249,GO:0044271,GO:0044272,GO:0044424,GO:0044464,GO:0051186,GO:0051188,GO:0071704,GO:1901564,GO:1901566,GO:1901576 6.3.2.3 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002957 420.0
DYD1_k127_2655850_3 Belongs to the ATCase OTCase family K00609 GO:0003674,GO:0003824,GO:0004070,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006139,GO:0006220,GO:0006221,GO:0006725,GO:0006753,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009117,GO:0009165,GO:0009218,GO:0009220,GO:0009259,GO:0009260,GO:0009987,GO:0016740,GO:0016741,GO:0016743,GO:0018130,GO:0019438,GO:0019637,GO:0019693,GO:0034641,GO:0034654,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0044424,GO:0044464,GO:0046390,GO:0046483,GO:0055086,GO:0071704,GO:0072527,GO:0072528,GO:0090407,GO:1901135,GO:1901137,GO:1901293,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576 2.1.3.2 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000005297 292.0
DYD1_k127_2655850_4 Belongs to the LOG family K06966 - 3.2.2.10 0.000000000000000000000000000000000000000000000000000000000000000001157 241.0
DYD1_k127_2655850_5 COG0784 FOG CheY-like receiver K02657,K03413 - - 0.000000000000000000000000000000000000000000000000006422 186.0
DYD1_k127_2655850_6 Periplasmic protein TonB links inner and outer membranes K03832 - - 0.0000000000000000000000000000000000000000000000003957 186.0
DYD1_k127_2655850_7 COG0346 Lactoylglutathione lyase and related lyases - - - 0.00000000000000000000000000000000000000000000003155 173.0
DYD1_k127_2655850_8 chemotaxis signal transduction protein K02659 - - 0.000000000000000000000000000000405 131.0
DYD1_k127_2655850_9 Could be a nuclease involved in processing of the 5'-end of pre-16S rRNA K07447 - - 0.000000000000000000000000000005988 125.0
DYD1_k127_2671365_0 COG0367 Asparagine synthase (glutamine-hydrolyzing) K01953 - 6.3.5.4 2.327e-209 663.0
DYD1_k127_2671365_1 Putative neutral zinc metallopeptidase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005744 387.0
DYD1_k127_2671365_2 helix_turn_helix multiple antibiotic resistance protein - - - 0.00000000000000000000000006847 116.0
DYD1_k127_2696278_0 Berberine and berberine like - - - 3.765e-275 850.0
DYD1_k127_2696278_1 Bacterial transcriptional activator domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002642 487.0
DYD1_k127_2696278_2 Predicted metal-binding integral membrane protein (DUF2182) - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000146 467.0
DYD1_k127_2696278_3 Protein of unknown function (DUF1326) - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003635 441.0
DYD1_k127_2696278_4 extracellular solute-binding protein, family 5 K02035,K13893 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009027 443.0
DYD1_k127_2696278_5 Belongs to the ABC transporter superfamily K02031 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002965 415.0
DYD1_k127_2696278_6 COG0601 ABC-type dipeptide oligopeptide nickel transport systems, permease components K02033 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001111 394.0
DYD1_k127_2696278_7 N-terminal TM domain of oligopeptide transport permease C K02034 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005168 377.0
DYD1_k127_2696278_8 Belongs to the ABC transporter superfamily K10823 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002338 377.0
DYD1_k127_2696949_0 Formate dehydrogenase, alpha subunit K00123 - 1.17.1.9 0.0 1392.0
DYD1_k127_2696949_1 NADH-quinone oxidoreductase subunit F K00124 - - 1.399e-231 737.0
DYD1_k127_2696949_2 Molybdenum cofactor synthesis domain protein K03750 - 2.10.1.1 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004198 392.0
DYD1_k127_2696949_3 PFAM Cyclopropane-fatty-acyl-phospholipid synthase K00574 - 2.1.1.79 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000557 351.0
DYD1_k127_2696949_4 Required for formate dehydrogenase (FDH) activity. Acts as a sulfur carrier protein that transfers sulfur from IscS to the molybdenum cofactor prior to its insertion into FDH K02379 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000005945 274.0
DYD1_k127_2696949_5 May be involved in the biosynthesis of molybdopterin K03638 - 2.7.7.75 0.000000000000000000000000000000000000000000000000000000000000000000000004866 252.0
DYD1_k127_2696949_6 belongs to the aldehyde dehydrogenase family K00128,K19700 - 1.2.1.3,1.2.1.83 0.00000000000000000000000000000000000000000000000000000000000000000002892 238.0
DYD1_k127_2696949_7 Transfers a GMP moiety from GTP to Mo-molybdopterin (Mo- MPT) cofactor (Moco or molybdenum cofactor) to form Mo- molybdopterin guanine dinucleotide (Mo-MGD) cofactor K03752 - 2.7.7.77 0.00000000000000000000000000000003567 132.0
DYD1_k127_2696949_8 2Fe-2S iron-sulfur cluster binding domain K04755 - - 0.0000000000000000000000000005815 116.0
DYD1_k127_2696949_9 NADH-dependant formate dehydrogenase delta subunit FdsD K00126 - 1.17.1.9 0.000000001617 61.0
DYD1_k127_2738509_0 DEAD/H associated K03724 - - 7.133e-312 971.0
DYD1_k127_2738509_1 Activates fatty acids by binding to coenzyme A K01897 - 6.2.1.3 2.643e-246 771.0
DYD1_k127_2738509_2 Domain in cystathionine beta-synthase and other proteins. - - - 5.183e-217 694.0
DYD1_k127_2738509_3 Aminotransferase class-V - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008124 367.0
DYD1_k127_2738509_4 Poorly processive, error-prone DNA polymerase involved in untargeted mutagenesis. Copies undamaged DNA at stalled replication forks, which arise in vivo from mismatched or misaligned primer ends. These misaligned primers can be extended by PolIV. Exhibits no 3'-5' exonuclease (proofreading) activity. May be involved in translesional synthesis, in conjunction with the beta clamp from PolIII K02346 - 2.7.7.7 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001746 331.0
DYD1_k127_2738509_5 - - - - 0.0000000000000000375 90.0
DYD1_k127_2760952_0 PFAM Aminotransferase class-III K00821 - 2.6.1.11,2.6.1.17 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001105 500.0
DYD1_k127_2760952_1 Part of a membrane complex involved in electron transport - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002814 446.0
DYD1_k127_2760952_10 TraB family K09973 - - 0.00000000000000000000000000000000000001765 155.0
DYD1_k127_2760952_11 - - - - 0.000000000000004324 80.0
DYD1_k127_2760952_2 Belongs to the UPF0276 family K09930 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004345 417.0
DYD1_k127_2760952_3 DNA repair enzyme that has both DNA N-glycosylase activity and AP-lyase activity. The DNA N-glycosylase activity releases various damaged pyrimidines from DNA by cleaving the N- glycosidic bond, leaving an AP (apurinic apyrimidinic) site. The AP-lyase activity cleaves the phosphodiester bond 3' to the AP site by a beta-elimination, leaving a 3'-terminal unsaturated sugar and a product with a terminal 5'-phosphate K10773 - 4.2.99.18 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004225 333.0
DYD1_k127_2760952_4 Trims short 3' overhangs of a variety of RNA species, leaving a one or two nucleotide 3' overhang. Responsible for the end-turnover of tRNA specifically removes the terminal AMP residue from uncharged tRNA (tRNA-C-C-A). Also appears to be involved in tRNA biosynthesis K03683 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000002667 273.0
DYD1_k127_2760952_5 Part of a membrane complex involved in electron transport K03615 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000001683 263.0
DYD1_k127_2760952_6 Part of a membrane complex involved in electron transport K03613 - - 0.000000000000000000000000000000000000000000000000000000000000000000001041 243.0
DYD1_k127_2760952_7 Putative DNA-binding domain K09929 - - 0.0000000000000000000000000000000000000000000000000000000000000000006727 239.0
DYD1_k127_2760952_8 DoxX K15977 - - 0.00000000000000000000000000000000000000000000000000000000000001205 227.0
DYD1_k127_2760952_9 Part of a membrane complex involved in electron transport K03612 - - 0.0000000000000000000000000000000000000000000000000000002238 201.0
DYD1_k127_2762112_0 Prevents misfolding and promotes the refolding and proper assembly of unfolded polypeptides generated under stress conditions K04077 - - 3.004e-269 837.0
DYD1_k127_2762112_1 Involved in the regulation of glutamine synthetase GlnA, a key enzyme in the process to assimilate ammonia. When cellular nitrogen levels are high, the C-terminal adenylyl transferase (AT) inactivates GlnA by covalent transfer of an adenylyl group from ATP to specific tyrosine residue of GlnA, thus reducing its activity. Conversely, when nitrogen levels are low, the N-terminal adenylyl removase (AR) activates GlnA by removing the adenylyl group by phosphorolysis, increasing its activity. The regulatory region of GlnE binds the signal transduction protein PII (GlnB) which indicates the nitrogen status of the cell K00982 GO:0000820,GO:0003674,GO:0003824,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006521,GO:0008150,GO:0008882,GO:0010565,GO:0016740,GO:0016772,GO:0016779,GO:0019222,GO:0031323,GO:0033238,GO:0044424,GO:0044444,GO:0044464,GO:0050789,GO:0050794,GO:0051171,GO:0062012,GO:0065007,GO:0070566,GO:0080090 2.7.7.42,2.7.7.89 2.063e-195 640.0
DYD1_k127_2762112_10 Zinc-finger domain - - - 0.000000000000000000434 91.0
DYD1_k127_2762112_11 Antioxidant protein with alkyl hydroperoxidase activity. Required for the reduction of the AhpC active site cysteine residues and for the regeneration of the AhpC enzyme activity - - - 0.00000000000000001323 90.0
DYD1_k127_2762112_12 Domain of unknown function (DUF4252) - - - 0.0000000001566 66.0
DYD1_k127_2762112_13 mechanosensitive ion channel - - - 0.0005154 48.0
DYD1_k127_2762112_14 Mechanosensitive ion channel - - - 0.0005371 47.0
DYD1_k127_2762112_2 - - - - 0.0000000000000000000000000000000000000000000000000000004291 205.0
DYD1_k127_2762112_3 COG3307 Lipid A core - O-antigen ligase and related enzymes - - - 0.000000000000000000000000000000000000000000000000000005756 206.0
DYD1_k127_2762112_4 Binds to Cpn60 in the presence of Mg-ATP and suppresses the ATPase activity of the latter K04078 - - 0.000000000000000000000000000000000000000000000001149 175.0
DYD1_k127_2762112_5 Domain of unknown function (DUF4281) - - - 0.0000000000000000000000000000000000000001929 158.0
DYD1_k127_2762112_6 PFAM electron transport protein SCO1 SenC K07152 - - 0.00000000000000000000000000000001035 137.0
DYD1_k127_2762112_7 Catalyzes the transfer of laurate from lauroyl-acyl carrier protein (ACP) to Kdo(2)-lipid IV(A) to form Kdo(2)- (lauroyl)-lipid IV(A) K02517 - 2.3.1.241 0.000000000000000000000000000004425 121.0
DYD1_k127_2762112_8 ECF sigma factor - - - 0.00000000000000000000000000004274 122.0
DYD1_k127_2762112_9 Domain of unknown function (DUF4252) - - - 0.000000000000000000324 99.0
DYD1_k127_2763642_0 Cytochrome C and Quinol oxidase polypeptide I K02274 - 1.9.3.1 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001488 487.0
DYD1_k127_2763642_1 oxidase, subunit K02276 - 1.9.3.1 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000213 349.0
DYD1_k127_2763642_2 Thiolesterase that catalyzes the hydrolysis of S-D- lactoyl-glutathione to form glutathione and D-lactic acid K17837 - 3.5.2.6 0.00000000000000000000000000000000000000000000000000003004 207.0
DYD1_k127_2763642_3 cytochrome c oxidase subunit III K02276 - 1.9.3.1 0.000000000000000000000000000000000000000000000001902 180.0
DYD1_k127_2763642_4 Prokaryotic Cytochrome C oxidase subunit IV - - - 0.0000000000000000000000000000000000000000007021 162.0
DYD1_k127_2763642_5 Prolyl 4-hydroxylase alpha subunit homologues. K00472 - 1.14.11.2 0.00000001132 65.0
DYD1_k127_2763642_6 tetratricopeptide repeat - - - 0.0001669 51.0
DYD1_k127_27678_0 - - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003495 349.0
DYD1_k127_27678_1 Monogalactosyldiacylglycerol (MGDG) synthase K03429 - 2.4.1.315 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003791 356.0
DYD1_k127_27678_10 Conserved Protein - - - 0.00009476 53.0
DYD1_k127_27678_2 - - - - 0.00000000000000000000000000000000000000000000000000000000569 211.0
DYD1_k127_27678_3 Mycolic acid cyclopropane synthetase - - - 0.00000000000000000000000000000000000000000000000000000394 198.0
DYD1_k127_27678_4 Polysaccharide deacetylase - - - 0.000000000000000000000000000000000000000000000000009962 187.0
DYD1_k127_27678_5 MerR, DNA binding K19591 - - 0.0000000000000000000000000000000000000189 149.0
DYD1_k127_27678_6 polysaccharide deacetylase - - - 0.00000000000000000000000001602 118.0
DYD1_k127_27678_7 - - - - 0.0000000000000000000004663 107.0
DYD1_k127_27678_8 Thioredoxin domain - - - 0.0000000000000000001947 88.0
DYD1_k127_27678_9 Heavy-metal-associated domain - - - 0.000000000000003352 81.0
DYD1_k127_2787888_0 von Willebrand factor type A domain - - - 0.000000000000000000000000000000000000000000000000000000000000000001308 237.0
DYD1_k127_2787888_2 - - - - 0.0004736 52.0
DYD1_k127_2790865_0 TonB dependent receptor - - - 6.206e-300 941.0
DYD1_k127_2790865_1 COG0457 FOG TPR repeat - - - 1.33e-261 823.0
DYD1_k127_2790865_10 Putative esterase K07214 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000134 385.0
DYD1_k127_2790865_11 Belongs to the serpin family K13963 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002077 339.0
DYD1_k127_2790865_12 Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain K07303 - 1.3.99.16 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003558 327.0
DYD1_k127_2790865_13 amine dehydrogenase activity - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000004278 301.0
DYD1_k127_2790865_14 [2Fe-2S] binding domain K07302 - 1.3.99.16 0.00000000000000000000000000000000000000000000000000000000000000000000002891 243.0
DYD1_k127_2790865_15 glutathione S-transferase K00799 - 2.5.1.18 0.0000000000000000000000000000000000000000000000000000000000000000003372 234.0
DYD1_k127_2790865_16 - - - - 0.00000000000000000000000000000000000000000000000000000000000004975 218.0
DYD1_k127_2790865_17 Protein of unknown function (DUF1428) - - - 0.00000000000000000000000000000000000000000000000000000003949 198.0
DYD1_k127_2790865_18 Toxic component of a toxin-antitoxin (TA) module. An RNase - - - 0.000000000000000000000000000000000000000000000000000001771 193.0
DYD1_k127_2790865_19 Belongs to the peptidase S51 family - - - 0.0000000000000000000000000000000000000000000002823 179.0
DYD1_k127_2790865_2 Sodium:sulfate symporter transmembrane region - - - 3.632e-251 787.0
DYD1_k127_2790865_20 - - - - 0.000000000000000000000000000001039 128.0
DYD1_k127_2790865_21 MerR, DNA binding K08365 - - 0.00000000000000000000000000001078 127.0
DYD1_k127_2790865_22 Belongs to the cation diffusion facilitator (CDF) transporter (TC 2.A.4) family - - - 0.00000000000000000000000001873 110.0
DYD1_k127_2790865_23 Phenylacetate-CoA oxygenase K02612 - - 0.00000000000000000002579 91.0
DYD1_k127_2790865_24 Bacterial antitoxin of type II TA system, VapB - - - 0.0000000000000000001653 89.0
DYD1_k127_2790865_26 Membrane - - - 0.000000000748 62.0
DYD1_k127_2790865_27 - - - - 0.00001511 54.0
DYD1_k127_2790865_3 Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008743 507.0
DYD1_k127_2790865_4 Synthesizes alpha-1,4-glucan chains using ADP-glucose K00703 GO:0003674,GO:0003824,GO:0016740,GO:0016757 2.4.1.21 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000234 507.0
DYD1_k127_2790865_5 Involved in the de novo purine biosynthesis. Catalyzes the transfer of formate to 5-phospho-ribosyl-glycinamide (GAR), producing 5-phospho-ribosyl-N-formylglycinamide (FGAR). Formate is provided by PurU via hydrolysis of 10-formyl-tetrahydrofolate - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000207 490.0
DYD1_k127_2790865_6 COG1018 Flavodoxin reductases (ferredoxin-NADPH reductases) family 1 K02613 GO:0000166,GO:0003674,GO:0005488,GO:0006082,GO:0006725,GO:0006805,GO:0008150,GO:0008152,GO:0009056,GO:0009404,GO:0009407,GO:0009410,GO:0009636,GO:0009850,GO:0009852,GO:0009987,GO:0010124,GO:0010817,GO:0016054,GO:0019439,GO:0019748,GO:0019752,GO:0032787,GO:0036094,GO:0042178,GO:0042221,GO:0042445,GO:0042447,GO:0042537,GO:0043167,GO:0043168,GO:0043436,GO:0044237,GO:0044248,GO:0044281,GO:0044282,GO:0046395,GO:0048037,GO:0050660,GO:0050662,GO:0050896,GO:0051536,GO:0051537,GO:0051540,GO:0051716,GO:0065007,GO:0065008,GO:0070887,GO:0071466,GO:0071704,GO:0072329,GO:0097159,GO:0098754,GO:1901265,GO:1901360,GO:1901361,GO:1901363,GO:1901575 - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004561 482.0
DYD1_k127_2790865_7 Involved in the de novo purine biosynthesis. Catalyzes the transfer of formate to 5-phospho-ribosyl-glycinamide (GAR), producing 5-phospho-ribosyl-N-formylglycinamide (FGAR). Formate is provided by PurU via hydrolysis of 10-formyl-tetrahydrofolate - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000031 456.0
DYD1_k127_2790865_8 CBS domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002901 434.0
DYD1_k127_2790865_9 Belongs to the D-alanine--D-alanine ligase family - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001824 387.0
DYD1_k127_2842382_0 COG1228 Imidazolonepropionase and related amidohydrolases - - - 1.737e-204 645.0
DYD1_k127_2842382_1 Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family K12256 - 2.6.1.113 2.072e-196 622.0
DYD1_k127_2842382_10 ABC-type spermidine putrescine transport system, permease component I K11075 GO:0005575,GO:0005623,GO:0005886,GO:0005887,GO:0006810,GO:0006811,GO:0006812,GO:0008150,GO:0015695,GO:0015696,GO:0015846,GO:0015847,GO:0016020,GO:0016021,GO:0031224,GO:0031226,GO:0032991,GO:0043190,GO:0044425,GO:0044459,GO:0044464,GO:0051179,GO:0051234,GO:0071702,GO:0071705,GO:0071944,GO:0098533,GO:0098796,GO:0098797,GO:1902494,GO:1902495,GO:1904949,GO:1990351 - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000057 373.0
DYD1_k127_2842382_11 COG1177 ABC-type spermidine putrescine transport system, permease component II K11074 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003448 364.0
DYD1_k127_2842382_12 Nitroreductase family - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000006346 295.0
DYD1_k127_2842382_13 Glutamine K07010 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000001242 274.0
DYD1_k127_2842382_14 Tyrosine phosphatase family - - - 0.0000000000000000004605 98.0
DYD1_k127_2842382_15 protein kinase activity - - - 0.000000000000002603 87.0
DYD1_k127_2842382_16 N-acyl-L-amino acid amidohydrolase K01436 - - 0.000003989 49.0
DYD1_k127_2842382_2 oxidoreductase K09471 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005471 499.0
DYD1_k127_2842382_3 Belongs to the arginase family K01479,K01480 GO:0003674,GO:0003824,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006576,GO:0006595,GO:0006596,GO:0006807,GO:0008150,GO:0008152,GO:0008783,GO:0009058,GO:0009308,GO:0009309,GO:0009445,GO:0009446,GO:0009987,GO:0016787,GO:0016810,GO:0016813,GO:0030145,GO:0034641,GO:0042401,GO:0043167,GO:0043169,GO:0044106,GO:0044237,GO:0044249,GO:0044271,GO:0044424,GO:0044444,GO:0044464,GO:0046872,GO:0046914,GO:0071704,GO:0097164,GO:1901564,GO:1901566,GO:1901576 3.5.3.11,3.5.3.8 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004112 469.0
DYD1_k127_2842382_4 TonB dependent receptor K16092 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005079 452.0
DYD1_k127_2842382_5 Extracellular nuclease K07004 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001391 443.0
DYD1_k127_2842382_6 COG0534 Na -driven multidrug efflux pump - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004189 422.0
DYD1_k127_2842382_7 Ring hydroxylating alpha subunit (catalytic domain) K00479 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008666 415.0
DYD1_k127_2842382_8 Patatin-like phospholipase K07001 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005199 398.0
DYD1_k127_2842382_9 Amidohydrolase family - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001495 386.0
DYD1_k127_2846552_0 COG1629 Outer membrane receptor proteins, mostly Fe transport - - - 1.431e-268 849.0
DYD1_k127_2846552_1 Spermine/spermidine synthase domain K00797 - 2.5.1.16 6.29e-260 824.0
DYD1_k127_2846552_2 Catalyzes the methyl esterification of L-isoaspartyl residues in peptides and proteins that result from spontaneous decomposition of normal L-aspartyl and L-asparaginyl residues. It plays a role in the repair and or degradation of damaged proteins K00573 - 2.1.1.77 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000006907 301.0
DYD1_k127_2846552_3 Transcriptional regulator - - - 0.0000000000000000000000000000000000000000000000000000000000000004844 223.0
DYD1_k127_2846552_4 Glutathione-dependent formaldehyde-activating - - - 0.000000000000000000000000000000000000000000000000008436 186.0
DYD1_k127_2864931_0 Catalyzes the reversible transfer of the terminal phosphate of ATP to form a long-chain polyphosphate (polyP) K00937 - 2.7.4.1 8.52e-214 687.0
DYD1_k127_2864931_1 COG0655 Multimeric flavodoxin WrbA - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003818 439.0
DYD1_k127_2864931_2 NmrA-like family - - - 0.0000000000000000000000000000000000000000000000000000000000000000002733 241.0
DYD1_k127_2864931_3 arylsulfatase activity K01133 - 3.1.6.6 0.0000000000000000000000000000000000000000000000000000000007729 218.0
DYD1_k127_2864931_4 - - - - 0.000000000000000000000000000006452 134.0
DYD1_k127_2864931_5 Protein of unknown function (DUF1697) - - - 0.0000000006119 60.0
DYD1_k127_2864931_7 Putative peptidoglycan binding domain - - - 0.00005682 53.0
DYD1_k127_2880122_0 amine dehydrogenase activity - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002429 414.0
DYD1_k127_2880122_1 Protease prsW family - - - 0.0000000000000000000000000000000000002021 154.0
DYD1_k127_2880122_2 TPM domain K06872 - - 0.000000000000000000000000000006668 122.0
DYD1_k127_2918494_0 PFAM phosphate transporter K03306 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003761 549.0
DYD1_k127_2918494_1 transport system, permease component K02037 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002556 323.0
DYD1_k127_2918494_2 Protein of unknown function DUF47 K07220 - - 0.00000000000000000000000000000000000000000000000000000000000001048 233.0
DYD1_k127_2918494_3 D-alanyl-D-alanine carboxypeptidase K07260 - 3.4.17.14 0.000000000000000000000000000000000000000000000000000000005657 210.0
DYD1_k127_2978672_0 dipeptidase K08659 - - 1.391e-238 749.0
DYD1_k127_2978672_1 Belongs to the peptidase S33 family K01259 - 3.4.11.5 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002326 417.0
DYD1_k127_2978672_10 ligase activity - - - 0.00000000000000000000000000000000000000000000000000000000003843 216.0
DYD1_k127_2978672_11 Uncharacterized protein conserved in bacteria (DUF2219) - - - 0.0000000000000000000000000000000000000000001945 174.0
DYD1_k127_2978672_12 Belongs to the small heat shock protein (HSP20) family K13993 - - 0.000000000000000000000000000009522 123.0
DYD1_k127_2978672_13 COG2335, Secreted and surface protein containing fasciclin-like repeats - - - 0.0000000000000000002551 102.0
DYD1_k127_2978672_14 - - - - 0.00000000000000002379 96.0
DYD1_k127_2978672_2 peptidase dimerisation domain K01295 - 3.4.17.11 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003106 419.0
DYD1_k127_2978672_3 COGs COG3367 conserved K16149 - 2.4.1.18 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002373 372.0
DYD1_k127_2978672_4 Belongs to the peptidase S11 family K07262 GO:0003674,GO:0003824,GO:0004175,GO:0006508,GO:0006807,GO:0008150,GO:0008152,GO:0008233,GO:0016787,GO:0019538,GO:0043170,GO:0044238,GO:0070011,GO:0071704,GO:0140096,GO:1901564 - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004245 365.0
DYD1_k127_2978672_5 Sodium/hydrogen exchanger family - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002236 374.0
DYD1_k127_2978672_6 Cytochrome P450 - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002953 337.0
DYD1_k127_2978672_7 VIT family - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000003586 266.0
DYD1_k127_2978672_8 Taurine catabolism dioxygenase TauD, TfdA family - - - 0.00000000000000000000000000000000000000000000000000000000000000000001763 247.0
DYD1_k127_2978672_9 Flavin reductase like domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000321 237.0
DYD1_k127_2987495_0 cellulose binding - - - 5.477e-203 638.0
DYD1_k127_2987495_1 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002867 419.0
DYD1_k127_2987495_10 Catalyzes the transfer of an acetyl group from acetyl- CoA to the 6'-amino group of aminoglycoside molecules conferring resistance to antibiotics containing the purpurosamine ring K18816 GO:0003674,GO:0003824,GO:0008080,GO:0008150,GO:0016407,GO:0016410,GO:0016740,GO:0016746,GO:0016747,GO:0034069,GO:0042221,GO:0046677,GO:0047663,GO:0050896 2.3.1.82 0.0000000000000000000000000000001883 137.0
DYD1_k127_2987495_11 PFAM SNARE associated Golgi protein - - - 0.00000000000000000000000007491 116.0
DYD1_k127_2987495_12 Mo-molybdopterin cofactor metabolic process K03636,K21147 - 2.7.7.80,2.8.1.11 0.00003259 46.0
DYD1_k127_2987495_2 Pyridoxal-phosphate dependent enzyme - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008279 383.0
DYD1_k127_2987495_3 involved in molybdopterin and thiamine biosynthesis family 2 K21029 - 2.7.7.80 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001291 363.0
DYD1_k127_2987495_4 Transcriptional regulatory protein, C terminal - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001948 308.0
DYD1_k127_2987495_5 Spondin_N - - - 0.0000000000000000000000000000000000000000000000000000000000003507 219.0
DYD1_k127_2987495_6 ATP-grasp domain K14755 - 6.3.2.11 0.0000000000000000000000000000000000000000000000002443 201.0
DYD1_k127_2987495_7 Belongs to the D-alanine--D-alanine ligase family K01921 - 6.3.2.4 0.0000000000000000000000000000000000000000003619 181.0
DYD1_k127_2987495_8 - - - - 0.000000000000000000000000000000000000000006751 163.0
DYD1_k127_2987495_9 Protein of unknown function (DUF498/DUF598) - - - 0.000000000000000000000000000000000000000732 151.0
DYD1_k127_2991851_0 Cytochrome C biogenesis K02198 - - 3.092e-248 782.0
DYD1_k127_2991851_1 Transfers a succinyl group from succinyl-CoA to L- serine, forming succinyl-L-serine K00641 GO:0000096,GO:0000097,GO:0003674,GO:0003824,GO:0004414,GO:0006082,GO:0006520,GO:0006555,GO:0006790,GO:0006807,GO:0008150,GO:0008152,GO:0008374,GO:0008652,GO:0009058,GO:0009066,GO:0009067,GO:0009069,GO:0009086,GO:0009092,GO:0009987,GO:0016053,GO:0016407,GO:0016413,GO:0016740,GO:0016746,GO:0016747,GO:0019752,GO:0043436,GO:0044237,GO:0044238,GO:0044249,GO:0044272,GO:0044281,GO:0044283,GO:0046394,GO:0071704,GO:1901564,GO:1901566,GO:1901576,GO:1901605,GO:1901607 2.3.1.31 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003094 434.0
DYD1_k127_2991851_10 subunit of a heme lyase K02200 - - 0.00000000000000000000000000000000001141 143.0
DYD1_k127_2991851_11 Belongs to the class-I pyridine nucleotide-disulfide oxidoreductase family K00383 GO:0000166,GO:0000302,GO:0000305,GO:0003674,GO:0005488,GO:0005507,GO:0005524,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005739,GO:0006950,GO:0006979,GO:0008144,GO:0008150,GO:0009507,GO:0009532,GO:0009536,GO:0009570,GO:0009987,GO:0010035,GO:0017076,GO:0019725,GO:0030554,GO:0032553,GO:0032555,GO:0032559,GO:0035639,GO:0036094,GO:0042221,GO:0042592,GO:0043167,GO:0043168,GO:0043169,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0044422,GO:0044424,GO:0044434,GO:0044435,GO:0044444,GO:0044446,GO:0044464,GO:0045454,GO:0046872,GO:0046914,GO:0050789,GO:0050794,GO:0050896,GO:0065007,GO:0065008,GO:0097159,GO:0097367,GO:1901265,GO:1901363,GO:1901700 1.8.1.7 0.000000000000000000000004755 101.0
DYD1_k127_2991851_2 Required for the export of heme to the periplasm for the biogenesis of c-type cytochromes K02195 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003618 329.0
DYD1_k127_2991851_3 Cysteine dioxygenase type I - - - 0.0000000000000000000000000000000000000000000000000000000000000000000001066 244.0
DYD1_k127_2991851_4 Required for the export of heme to the periplasm for the biogenesis of c-type cytochromes K02194 - - 0.000000000000000000000000000000000000000000000000000000000000000000002395 243.0
DYD1_k127_2991851_5 TIGRFAM periplasmic protein thiol K02199 - - 0.0000000000000000000000000000000000000000000000000000001064 204.0
DYD1_k127_2991851_6 Methyltransferase - - - 0.000000000000000000000000000000000000000000000000000002349 200.0
DYD1_k127_2991851_7 Heme chaperone required for the biogenesis of c-type cytochromes. Transiently binds heme delivered by CcmC and transfers the heme to apo-cytochromes in a process facilitated by CcmF and CcmH K02197 GO:0003674,GO:0003824,GO:0005488,GO:0005575,GO:0005623,GO:0005886,GO:0006464,GO:0006807,GO:0006810,GO:0008150,GO:0008152,GO:0009897,GO:0009986,GO:0009987,GO:0015886,GO:0016020,GO:0016043,GO:0017003,GO:0017004,GO:0017006,GO:0018063,GO:0019538,GO:0020037,GO:0022607,GO:0031224,GO:0031226,GO:0031233,GO:0031237,GO:0034622,GO:0036211,GO:0043170,GO:0043412,GO:0043933,GO:0044085,GO:0044237,GO:0044238,GO:0044260,GO:0044267,GO:0044425,GO:0044459,GO:0044464,GO:0046906,GO:0048037,GO:0051179,GO:0051181,GO:0051234,GO:0065003,GO:0071702,GO:0071704,GO:0071705,GO:0071840,GO:0071944,GO:0097159,GO:0098552,GO:0098567,GO:1901363,GO:1901564,GO:1901678 - 0.0000000000000000000000000000000000000000006084 161.0
DYD1_k127_2991851_8 Cytochrome C biogenesis K02200 - - 0.000000000000000000000000000000000000000006295 167.0
DYD1_k127_2991851_9 once thought to export heme, this seems not to be the case, but its exact role is uncertain. Responsible for energy coupling to the transport system K02193 - 3.6.3.41 0.000000000000000000000000000000000000001892 155.0
DYD1_k127_3029896_0 56kDa selenium binding protein (SBP56) K17285 - - 2.57e-233 728.0
DYD1_k127_3029896_1 Glutamine amidotransferase domain K01953 - 6.3.5.4 2.211e-229 722.0
DYD1_k127_3029896_10 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily - - - 0.0000000000000000000000000000000000001088 145.0
DYD1_k127_3029896_11 DNA-binding transcription factor activity - - - 0.000000000000000000000002892 107.0
DYD1_k127_3029896_2 PFAM Di-haem cytochrome c peroxidase K00428 - 1.11.1.5 1.082e-218 695.0
DYD1_k127_3029896_3 belongs to the aspartokinase family K12524 GO:0003674,GO:0003824,GO:0004072,GO:0004412,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006082,GO:0006520,GO:0006553,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0008652,GO:0009058,GO:0009066,GO:0009067,GO:0009069,GO:0009070,GO:0009085,GO:0009089,GO:0009090,GO:0009092,GO:0009987,GO:0016053,GO:0016301,GO:0016310,GO:0016491,GO:0016614,GO:0016616,GO:0016740,GO:0016772,GO:0016774,GO:0019202,GO:0019752,GO:0043436,GO:0043648,GO:0044237,GO:0044238,GO:0044249,GO:0044281,GO:0044283,GO:0044424,GO:0044464,GO:0046394,GO:0046451,GO:0055114,GO:0071704,GO:1901564,GO:1901566,GO:1901576,GO:1901605,GO:1901607 1.1.1.3,2.7.2.4 2.318e-209 677.0
DYD1_k127_3029896_4 PFAM Cys Met metabolism PLP-dependent enzyme K01739,K01758,K01761 - 2.5.1.48,4.4.1.1,4.4.1.11 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005492 516.0
DYD1_k127_3029896_5 Threonine synthase K01733 - 4.2.3.1 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002347 496.0
DYD1_k127_3029896_6 cAMP biosynthetic process - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001775 385.0
DYD1_k127_3029896_7 Periplasmic binding protein K02016 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002349 356.0
DYD1_k127_3029896_8 Glutathione S-transferase, C-terminal domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000002445 291.0
DYD1_k127_3029896_9 Catalyzes the ATP-dependent phosphorylation of L- homoserine to L-homoserine phosphate K00872 GO:0000096,GO:0000097,GO:0003674,GO:0003824,GO:0004413,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006082,GO:0006520,GO:0006555,GO:0006566,GO:0006790,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0008652,GO:0009058,GO:0009066,GO:0009067,GO:0009069,GO:0009086,GO:0009088,GO:0009092,GO:0009987,GO:0016053,GO:0016301,GO:0016310,GO:0016740,GO:0016772,GO:0016773,GO:0019202,GO:0019752,GO:0043436,GO:0044237,GO:0044238,GO:0044249,GO:0044272,GO:0044281,GO:0044283,GO:0044424,GO:0044444,GO:0044464,GO:0046394,GO:0071704,GO:1901564,GO:1901566,GO:1901576,GO:1901605,GO:1901607 2.7.1.39 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000004512 289.0
DYD1_k127_304007_0 COG1042 Acyl-CoA synthetase (NDP forming) - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001635 585.0
DYD1_k127_304007_1 The glycine cleavage system catalyzes the degradation of glycine K00605 - 2.1.2.10 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006252 449.0
DYD1_k127_304007_2 belongs to the aldehyde dehydrogenase family K09472 - 1.2.1.99 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001279 410.0
DYD1_k127_3112819_0 Part of the outer membrane protein assembly complex, which is involved in assembly and insertion of beta-barrel proteins into the outer membrane - - - 5.828e-220 725.0
DYD1_k127_3112819_1 transferase activity, transferring acyl groups other than amino-acyl groups - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000512 561.0
DYD1_k127_3112819_11 domain, Protein K11904,K12132 - 2.7.11.1 0.0000001463 60.0
DYD1_k127_3112819_2 cysteine protease - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001823 538.0
DYD1_k127_3112819_3 Adenylate cyclase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001697 391.0
DYD1_k127_3112819_4 metallopeptidase activity - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000005289 324.0
DYD1_k127_3112819_5 PFAM amidohydrolase K01464 - 3.5.2.2 0.0000000000000000000000000000000000000000000000000000000000112 220.0
DYD1_k127_3112819_6 Domain of unknown function (DUF1929) - - - 0.000000000000000000000000000000000000001193 171.0
DYD1_k127_3112819_7 Hep Hag repeat protein - - - 0.00000000000000000000001738 118.0
DYD1_k127_3112819_8 Bacterial regulatory proteins, tetR family - - - 0.000000000000000000000107 104.0
DYD1_k127_3112819_9 Redoxin - - - 0.0000000000000000000005331 104.0
DYD1_k127_3165315_0 twitching motility protein K02669 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001901 526.0
DYD1_k127_3165315_1 twitching motility protein K02670 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003641 470.0
DYD1_k127_3165315_2 Histidine kinase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002126 362.0
DYD1_k127_3165315_3 XRE family transcriptional regulator - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004849 339.0
DYD1_k127_3165315_4 Catalyzes the reduction of 1-pyrroline-5-carboxylate (PCA) to L-proline K00286 GO:0003674,GO:0003824,GO:0004735,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006082,GO:0006520,GO:0006560,GO:0006561,GO:0006807,GO:0008150,GO:0008152,GO:0008652,GO:0009058,GO:0009064,GO:0009084,GO:0009987,GO:0016053,GO:0016491,GO:0016645,GO:0016646,GO:0017144,GO:0018130,GO:0019752,GO:0042802,GO:0043436,GO:0044237,GO:0044238,GO:0044249,GO:0044281,GO:0044283,GO:0044424,GO:0044444,GO:0044464,GO:0046394,GO:0046483,GO:0055114,GO:0055129,GO:0071704,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576,GO:1901605,GO:1901607 1.5.1.2 0.00000000000000000000000000000000000000000000000000000000000000000000233 243.0
DYD1_k127_3165315_5 Pyridoxal 5'-phosphate (PLP)-binding protein, which is involved in PLP homeostasis K06997 - - 0.00000000000000000000000000000000000000000000000000000000000000000005032 238.0
DYD1_k127_3165315_6 endonuclease activity - - - 0.000000000000000000000000000000000000000000000000000000000000000001922 235.0
DYD1_k127_3165315_7 integral membrane protein K02221 - - 0.0000000000000000000000000000000000000003478 155.0
DYD1_k127_3165315_8 Domain of unknown function (DUF4426) - - - 0.00000000000000000000000005862 119.0
DYD1_k127_3171780_0 ATPase and specificity subunit of the ClpA-ClpP ATP dependent serine protease K03694 - - 0.0 1049.0
DYD1_k127_3171780_1 Catalyzes the 2-thiolation of uridine at the wobble position (U34) of tRNA, leading to the formation of s(2)U34 K00566 GO:0001510,GO:0002097,GO:0002098,GO:0002143,GO:0003674,GO:0003824,GO:0004808,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006139,GO:0006396,GO:0006399,GO:0006400,GO:0006725,GO:0006807,GO:0008033,GO:0008150,GO:0008152,GO:0008168,GO:0008173,GO:0008175,GO:0008757,GO:0009451,GO:0009987,GO:0010467,GO:0016070,GO:0016740,GO:0016741,GO:0016782,GO:0016783,GO:0030488,GO:0032259,GO:0034227,GO:0034470,GO:0034641,GO:0034660,GO:0043170,GO:0043412,GO:0043414,GO:0044237,GO:0044238,GO:0044260,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0071704,GO:0090304,GO:0140098,GO:0140101,GO:1901360 2.8.1.13 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000356 392.0
DYD1_k127_3171780_2 Involved in the modulation of the specificity of the ClpAP-mediated ATP-dependent protein degradation K06891 - - 0.000000000000000000000000000000000000000000007812 164.0
DYD1_k127_3201926_0 Catalyzes the attachment of alanine to tRNA(Ala) in a two-step reaction alanine is first activated by ATP to form Ala- AMP and then transferred to the acceptor end of tRNA(Ala). Also edits incorrectly charged Ser-tRNA(Ala) and Gly-tRNA(Ala) via its editing domain K01872 GO:0001130,GO:0001131,GO:0001141,GO:0001217,GO:0002161,GO:0002196,GO:0003674,GO:0003700,GO:0003824,GO:0004812,GO:0004813,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006082,GO:0006139,GO:0006355,GO:0006396,GO:0006399,GO:0006400,GO:0006412,GO:0006418,GO:0006419,GO:0006450,GO:0006518,GO:0006520,GO:0006725,GO:0006807,GO:0008033,GO:0008150,GO:0008152,GO:0008270,GO:0009058,GO:0009059,GO:0009451,GO:0009889,GO:0009890,GO:0009892,GO:0009987,GO:0010467,GO:0010468,GO:0010556,GO:0010558,GO:0010605,GO:0010629,GO:0016070,GO:0016597,GO:0016787,GO:0016788,GO:0016874,GO:0016875,GO:0019219,GO:0019222,GO:0019538,GO:0019752,GO:0031323,GO:0031324,GO:0031326,GO:0031327,GO:0031406,GO:0034470,GO:0034641,GO:0034645,GO:0034660,GO:0036094,GO:0042802,GO:0043038,GO:0043039,GO:0043043,GO:0043167,GO:0043168,GO:0043169,GO:0043170,GO:0043177,GO:0043412,GO:0043436,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044281,GO:0044424,GO:0044444,GO:0044464,GO:0045892,GO:0045934,GO:0046483,GO:0046872,GO:0046914,GO:0048519,GO:0048523,GO:0050789,GO:0050794,GO:0051171,GO:0051172,GO:0051252,GO:0051253,GO:0052689,GO:0060255,GO:0065007,GO:0065008,GO:0071704,GO:0080090,GO:0090304,GO:0106074,GO:0140098,GO:0140101,GO:0140110,GO:1901360,GO:1901564,GO:1901566,GO:1901576,GO:1902679,GO:1903506,GO:1903507,GO:2000112,GO:2000113,GO:2001141 6.1.1.7 0.0 1056.0
DYD1_k127_3201926_1 that it carries out the mismatch recognition step. This protein has a weak ATPase activity K03555 - - 1.53e-303 958.0
DYD1_k127_3201926_10 Bacterial protein of unknown function (DUF839) K07093 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000998 400.0
DYD1_k127_3201926_11 Catalyzes the interconversion of L-alanine and D- alanine. May also act on other amino acids K01775 - 5.1.1.1 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003369 349.0
DYD1_k127_3201926_12 Belongs to the RNA methyltransferase TrmD family K00554 GO:0001510,GO:0003674,GO:0003824,GO:0006139,GO:0006396,GO:0006399,GO:0006400,GO:0006725,GO:0006807,GO:0008033,GO:0008150,GO:0008152,GO:0008168,GO:0008173,GO:0008175,GO:0008757,GO:0009019,GO:0009451,GO:0009987,GO:0010467,GO:0016070,GO:0016423,GO:0016740,GO:0016741,GO:0016772,GO:0016779,GO:0030488,GO:0032259,GO:0034470,GO:0034641,GO:0034660,GO:0043170,GO:0043412,GO:0043414,GO:0044237,GO:0044238,GO:0044260,GO:0046483,GO:0050518,GO:0070567,GO:0071704,GO:0090304,GO:0140098,GO:0140101,GO:1901360 2.1.1.228 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004047 313.0
DYD1_k127_3201926_13 Catalyzes the oxidative ring opening of 3- hydroxyanthranilate to 2-amino-3-carboxymuconate semialdehyde, which spontaneously cyclizes to quinolinate K00452 - 1.13.11.6 0.0000000000000000000000000000000000000000000000000000000000000000000000000267 258.0
DYD1_k127_3201926_14 Translation initiation inhibitor, yjgF family K15067 - 3.5.99.5 0.0000000000000000000000000000000000000000000000000001088 190.0
DYD1_k127_3201926_15 This protein is located at the 30S-50S ribosomal subunit interface and may play a role in the structure and function of the aminoacyl-tRNA binding site K02884 GO:0003674,GO:0003735,GO:0005198,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0015934,GO:0022625,GO:0022626,GO:0032991,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:1990904 - 0.0000000000000000000000000000000000000000000000000001774 188.0
DYD1_k127_3201926_16 An accessory protein needed during the final step in the assembly of 30S ribosomal subunit, possibly for assembly of the head region. Probably interacts with S19. Essential for efficient processing of 16S rRNA. May be needed both before and after RbfA during the maturation of 16S rRNA. It has affinity for free ribosomal 30S subunits but not for 70S ribosomes K02860 - - 0.0000000000000000000000000000000000000000000000000007836 188.0
DYD1_k127_3201926_17 Belongs to the CinA family K03743 GO:0003674,GO:0003824,GO:0016787,GO:0016810,GO:0016811,GO:0019159 3.5.1.42 0.000000000000000000000000000000000000000000000000641 179.0
DYD1_k127_3201926_18 binds to the 23S rRNA K02939 GO:0003674,GO:0003676,GO:0003723,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0006412,GO:0006518,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0015934,GO:0019538,GO:0022625,GO:0022626,GO:0032991,GO:0034641,GO:0034645,GO:0043043,GO:0043170,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:0071704,GO:0097159,GO:1901363,GO:1901564,GO:1901566,GO:1901576,GO:1990904 - 0.0000000000000000000000000000000000000000000000009344 178.0
DYD1_k127_3201926_19 Binds together with S18 to 16S ribosomal RNA K02990 - - 0.000000000000000000000000000000000000000000000002329 184.0
DYD1_k127_3201926_2 Molecular chaperone. Has ATPase activity K04079 - - 5.987e-236 747.0
DYD1_k127_3201926_20 Acetyltransferase (GNAT) domain - - - 0.0000000000000000000000000000000000000000002423 167.0
DYD1_k127_3201926_21 Cytochrome c assembly protein - - - 0.000000000000000000000000000000000000000002192 167.0
DYD1_k127_3201926_22 Is able to transfer iron-sulfur clusters to apo- ferredoxin. Multiple cycles of 2Fe2S cluster formation and transfer are observed, suggesting that IscA acts catalytically. Recruits intracellular free iron so as to provide iron for the assembly of transient iron-sulfur cluster in IscU in the presence of IscS, L-cysteine and the thioredoxin reductase system K05997,K13628 GO:0003674,GO:0005488,GO:0005506,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006790,GO:0006807,GO:0008150,GO:0008152,GO:0008198,GO:0009987,GO:0010467,GO:0016043,GO:0016226,GO:0016530,GO:0019538,GO:0022607,GO:0031163,GO:0034986,GO:0043167,GO:0043169,GO:0043170,GO:0044085,GO:0044237,GO:0044238,GO:0044424,GO:0044444,GO:0044464,GO:0046872,GO:0046914,GO:0048037,GO:0051186,GO:0051536,GO:0051537,GO:0051540,GO:0051604,GO:0071704,GO:0071840,GO:0097428,GO:0140104,GO:1901564 - 0.000000000000000000000000000000000002254 141.0
DYD1_k127_3201926_23 Binds as a heterodimer with protein S6 to the central domain of the 16S rRNA, where it helps stabilize the platform of the 30S subunit K02963 GO:0003674,GO:0003676,GO:0003723,GO:0003729,GO:0003735,GO:0005198,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0006412,GO:0006518,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0015935,GO:0019538,GO:0019843,GO:0022626,GO:0022627,GO:0032991,GO:0034641,GO:0034645,GO:0043043,GO:0043170,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:0048027,GO:0070181,GO:0071704,GO:0097159,GO:1901363,GO:1901564,GO:1901566,GO:1901576,GO:1990904 - 0.000000000000000000000000000000001763 131.0
DYD1_k127_3201926_24 Acyltransferase family - - - 0.000000000000000000000000000000003034 143.0
DYD1_k127_3201926_25 Belongs to the bacterial ribosomal protein bS16 family K02959 GO:0000028,GO:0000217,GO:0000400,GO:0003674,GO:0003676,GO:0003677,GO:0003735,GO:0003824,GO:0004518,GO:0004519,GO:0004520,GO:0004536,GO:0005198,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0006139,GO:0006259,GO:0006412,GO:0006518,GO:0006725,GO:0006807,GO:0006996,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0015935,GO:0016043,GO:0016787,GO:0016788,GO:0019538,GO:0022607,GO:0022613,GO:0022618,GO:0022626,GO:0022627,GO:0032991,GO:0034622,GO:0034641,GO:0034645,GO:0042254,GO:0042255,GO:0042274,GO:0043043,GO:0043170,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043603,GO:0043604,GO:0043933,GO:0044085,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:0046483,GO:0065003,GO:0070925,GO:0071704,GO:0071826,GO:0071840,GO:0090304,GO:0090305,GO:0097159,GO:0140097,GO:1901360,GO:1901363,GO:1901564,GO:1901566,GO:1901576,GO:1990904 - 0.00000000000000000000000000000003844 129.0
DYD1_k127_3201926_26 HeAt shock protein K04762 GO:0003674,GO:0003676,GO:0003677,GO:0003723,GO:0003727,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006139,GO:0006725,GO:0006807,GO:0006950,GO:0008150,GO:0008152,GO:0009266,GO:0009408,GO:0009451,GO:0009628,GO:0009987,GO:0016070,GO:0033554,GO:0034605,GO:0034641,GO:0043021,GO:0043023,GO:0043170,GO:0043412,GO:0044237,GO:0044238,GO:0044424,GO:0044444,GO:0044464,GO:0044877,GO:0046483,GO:0050896,GO:0051716,GO:0071704,GO:0090304,GO:0097159,GO:1901360,GO:1901363 - 0.00000000000000000000000000006884 119.0
DYD1_k127_3201926_27 Modulates RecA activity K03565 - - 0.0000000000000000000000403 104.0
DYD1_k127_3201926_28 Could accelerate the degradation of some genes transcripts potentially through selective RNA binding K03563 - - 0.000000000000000000006285 93.0
DYD1_k127_3201926_29 Hydrolyzes RNA 2',3'-cyclic phosphodiester to an RNA 2'- phosphomonoester K01975 - 3.1.4.58 0.000000000000000000131 95.0
DYD1_k127_3201926_3 asparaginyl-tRNA synthetase K01893 - 6.1.1.22 8.042e-221 692.0
DYD1_k127_3201926_4 Involved in targeting and insertion of nascent membrane proteins into the cytoplasmic membrane. Binds to the hydrophobic signal sequence of the ribosome-nascent chain (RNC) as it emerges from the ribosomes. The SRP-RNC complex is then targeted to the cytoplasmic membrane where it interacts with the SRP receptor FtsY. Interaction with FtsY leads to the transfer of the RNC complex to the Sec translocase for insertion into the membrane, the hydrolysis of GTP by both Ffh and FtsY, and the dissociation of the SRP-FtsY complex into the individual components K03106 - 3.6.5.4 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000361 595.0
DYD1_k127_3201926_5 it exhibits DNA-dependent ATPase activity and contains distinct active sites for ATP binding, DNA binding, and interaction with DnaC protein, primase, and other prepriming proteins K02314 - 3.6.4.12 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004933 577.0
DYD1_k127_3201926_6 Can catalyze the hydrolysis of ATP in the presence of single-stranded DNA, the ATP-dependent uptake of single-stranded DNA by duplex DNA, and the ATP-dependent hybridization of homologous single-stranded DNAs. It interacts with LexA causing its activation and leading to its autocatalytic cleavage K03553 GO:0003674,GO:0003676,GO:0003677,GO:0003697,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006139,GO:0006259,GO:0006281,GO:0006310,GO:0006725,GO:0006807,GO:0006928,GO:0006950,GO:0006974,GO:0007154,GO:0008150,GO:0008152,GO:0009314,GO:0009432,GO:0009605,GO:0009628,GO:0009987,GO:0009991,GO:0010212,GO:0031668,GO:0033554,GO:0034641,GO:0040011,GO:0043170,GO:0044237,GO:0044238,GO:0044260,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0048870,GO:0050896,GO:0051179,GO:0051674,GO:0051716,GO:0071496,GO:0071704,GO:0090304,GO:0097159,GO:1901360,GO:1901363 - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001261 557.0
DYD1_k127_3201926_7 DNA-dependent ATPase involved in processing of recombination intermediates, plays a role in repairing DNA breaks. Stimulates the branch migration of RecA-mediated strand transfer reactions, allowing the 3' invading strand to extend heteroduplex DNA faster. Binds ssDNA in the presence of ADP but not other nucleotides, has ATPase activity that is stimulated by ssDNA and various branched DNA structures, but inhibited by SSB. Does not have RecA's homology-searching function K04485 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000394 543.0
DYD1_k127_3201926_8 Magnesium chelatase, subunit ChlI K03974 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003195 432.0
DYD1_k127_3201926_9 CBS domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000722 436.0
DYD1_k127_3205789_0 Sulfate transporter K03321 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000667 284.0
DYD1_k127_3205789_1 COG0421 Spermidine synthase K00797 - 2.5.1.16 0.00000000000000000000000000000000000000000000000000000000000000000000000007029 256.0
DYD1_k127_3205789_2 Belongs to the UPF0178 family K09768 - - 0.00000000000000000000000000000000000000000000000000000000000003654 217.0
DYD1_k127_3205789_3 Bacterial transcriptional activator domain - - - 0.0000000000000000000000000000000000000000000000000000000001503 232.0
DYD1_k127_3205789_4 epimerase - - - 0.00000000000000000000000000000000000000001452 164.0
DYD1_k127_3205789_5 Pilus assembly protein K07346 - - 0.00000000000000002338 92.0
DYD1_k127_3205789_6 Adenylate cyclase - - - 0.000000000007817 79.0
DYD1_k127_3205789_7 positive regulation of growth K07746 - - 0.0002065 44.0
DYD1_k127_3221470_0 cAMP biosynthetic process - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000002663 286.0
DYD1_k127_3221470_1 - - - - 0.0000000000000000000000000000000000000000000000000008472 192.0
DYD1_k127_3221470_3 - - - - 0.000000000000000004088 90.0
DYD1_k127_3221470_4 peroxiredoxin activity - - - 0.0000000001098 68.0
DYD1_k127_3221470_5 Putative transposase - - - 0.000000001638 65.0
DYD1_k127_3221470_6 - - - - 0.0003696 50.0
DYD1_k127_3233624_0 cAMP biosynthetic process - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003263 358.0
DYD1_k127_3233624_1 MTH538 TIR-like domain (DUF1863) - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000006299 287.0
DYD1_k127_3233624_10 Type II transport protein GspH K08084 - - 0.00000000000002869 81.0
DYD1_k127_3233624_11 prepilin peptidase dependent protein K02680 - - 0.0000000000001128 81.0
DYD1_k127_3233624_12 Amidase K01426,K02433,K21801 - 3.5.1.4,6.3.5.6,6.3.5.7 0.00003771 48.0
DYD1_k127_3233624_2 Amidase K02433,K21801 - 6.3.5.6,6.3.5.7 0.0000000000000000000000000000000000000000000000000000002486 214.0
DYD1_k127_3233624_3 COG4967 Tfp pilus assembly protein PilV K02671 - - 0.00000000000000000000000000000000000000000000000000007545 210.0
DYD1_k127_3233624_4 Toxic component of a toxin-antitoxin (TA) module. An RNase K18828 - - 0.00000000000000000000000000000000000000000000000003999 182.0
DYD1_k127_3233624_5 Pilus assembly protein PilX - - - 0.00000000000000000000000000000000000000000000001741 189.0
DYD1_k127_3233624_6 cAMP biosynthetic process - - - 0.0000000000000000000000000001691 120.0
DYD1_k127_3233624_7 SpoVT AbrB K18829 - - 0.000000000000000000000000002168 112.0
DYD1_k127_3233624_8 Part of a heterotetrameric complex that catalyzes the two-step biosynthesis of anthranilate, an intermediate in the biosynthesis of L-tryptophan. In the first step, the glutamine- binding beta subunit (TrpG) of anthranilate synthase (AS) provides the glutamine amidotransferase activity which generates ammonia as a substrate that, along with chorismate, is used in the second step, catalyzed by the large alpha subunit of AS (TrpE) to produce anthranilate. In the absence of TrpG, TrpE can synthesize anthranilate directly from chorismate and high concentrations of ammonia K01657 - 4.1.3.27 0.0000000000000000000000007049 106.0
DYD1_k127_3233624_9 MAPEG family - - - 0.00000000000002433 76.0
DYD1_k127_3238762_0 Catalyzes the reversible conversion of 3- phosphohydroxypyruvate to phosphoserine and of 3-hydroxy-2-oxo-4- phosphonooxybutanoate to phosphohydroxythreonine K00831 - 2.6.1.52 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002188 573.0
DYD1_k127_3238762_1 Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family K00058 - 1.1.1.399,1.1.1.95 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002071 507.0
DYD1_k127_3238762_2 blue (type 1) copper K00368 - 1.7.2.1 0.00000000005349 72.0
DYD1_k127_3238762_3 6-phosphogluconolactonase activity - - - 0.000001196 59.0
DYD1_k127_3242436_0 Aerobic-type carbon monoxide dehydrogenase, large subunit CoxL K07303 - 1.3.99.16 7.302e-221 708.0
DYD1_k127_3242436_1 this subunit has chaperone activity. The binding of ATP and its subsequent hydrolysis by HslU are essential for unfolding of protein substrates subsequently hydrolyzed by HslV. HslU recognizes the N-terminal part of its protein substrates and unfolds these before they are guided to HslV for hydrolysis K03667 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003717 617.0
DYD1_k127_3242436_10 - - - - 0.00000000000000000000000000000000000000000000000000000000000001164 225.0
DYD1_k127_3242436_11 Bacterial regulatory proteins, tetR family K16137 - - 0.000000000000000000000000000000000000001237 154.0
DYD1_k127_3242436_12 MobA-like NTP transferase domain K07141 - 2.7.7.76 0.000000000000000000000000000000000000001334 154.0
DYD1_k127_3242436_13 2OG-Fe(II) oxygenase superfamily - - - 0.000000000000000000000000000000000000006992 153.0
DYD1_k127_3242436_14 - - - - 0.000000000000000000000000000001649 138.0
DYD1_k127_3242436_15 Sterol-binding protein K03690 - - 0.0000000000000000000009503 104.0
DYD1_k127_3242436_16 Belongs to the P-Pant transferase superfamily K06133 GO:0003674,GO:0003824,GO:0006082,GO:0006520,GO:0006553,GO:0006807,GO:0008150,GO:0008152,GO:0008652,GO:0008897,GO:0009058,GO:0009066,GO:0009067,GO:0009085,GO:0009987,GO:0016053,GO:0016740,GO:0016772,GO:0016780,GO:0019752,GO:0019878,GO:0043436,GO:0044237,GO:0044238,GO:0044249,GO:0044281,GO:0044283,GO:0046394,GO:0071704,GO:1901564,GO:1901566,GO:1901576,GO:1901605,GO:1901607 - 0.0000000000000000003767 97.0
DYD1_k127_3242436_17 Protein involved in outer membrane biogenesis - - - 0.00000000000000002832 91.0
DYD1_k127_3242436_2 Is probably a protein kinase regulator of UbiI activity which is involved in aerobic coenzyme Q (ubiquinone) biosynthesis K03688 GO:0003674,GO:0003824,GO:0005575,GO:0005623,GO:0005886,GO:0006732,GO:0006733,GO:0006743,GO:0006744,GO:0008150,GO:0008152,GO:0009058,GO:0009108,GO:0009987,GO:0016020,GO:0042180,GO:0042181,GO:0044237,GO:0044249,GO:0044281,GO:0044283,GO:0044464,GO:0051186,GO:0051188,GO:0071704,GO:0071944,GO:1901576,GO:1901661,GO:1901663 - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004805 582.0
DYD1_k127_3242436_3 PFAM Pyridoxal-dependent decarboxylase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003033 536.0
DYD1_k127_3242436_4 Belongs to the monovalent cation proton antiporter 2 (CPA2) transporter (TC 2.A.37) family - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001352 533.0
DYD1_k127_3242436_5 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal K22317 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002372 466.0
DYD1_k127_3242436_6 Methyltransferase required for the conversion of demethylmenaquinol (DMKH2) to menaquinol (MKH2) and the conversion of 2-polyprenyl-6-methoxy-1,4-benzoquinol (DDMQH2) to 2- polyprenyl-3-methyl-6-methoxy-1,4-benzoquinol (DMQH2) K03183 - 2.1.1.163,2.1.1.201 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009257 315.0
DYD1_k127_3242436_7 Protease subunit of a proteasome-like degradation complex believed to be a general protein degrading machinery K01419 - 3.4.25.2 0.00000000000000000000000000000000000000000000000000000000000000000000000000009534 264.0
DYD1_k127_3242436_8 [2Fe-2S] binding domain K07302 - 1.3.99.16 0.000000000000000000000000000000000000000000000000000000000000001193 222.0
DYD1_k127_3242436_9 Xanthine and CO dehydrogenases maturation factor, XdhC CoxF family K07402 - - 0.000000000000000000000000000000000000000000000000000000000000007033 230.0
DYD1_k127_3255919_0 receptor - - - 3.881e-265 839.0
DYD1_k127_3255919_1 LPXTG-motif cell wall anchor domain - - - 2.17e-254 818.0
DYD1_k127_3255919_10 Tetratricopeptide repeat - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000002439 304.0
DYD1_k127_3255919_11 glycosylase K01246 - 3.2.2.20 0.000000000000000000000000000000000000000000000000000000000000000000000000000004763 264.0
DYD1_k127_3255919_12 COG0491 Zn-dependent hydrolases, including glyoxylases K17837 - 3.5.2.6 0.0000000000000000000000000000000000000000000000000000000000000005926 235.0
DYD1_k127_3255919_13 Phospholipid N-methyltransferase - - - 0.000000000000000000000000000000000000000000000000000000000000268 217.0
DYD1_k127_3255919_14 YHS domain - - - 0.0000000000000000000000000000000000000000000000000000000005217 209.0
DYD1_k127_3255919_15 Antioxidant protein with alkyl hydroperoxidase activity. Required for the reduction of the AhpC active site cysteine residues and for the regeneration of the AhpC enzyme activity - - - 0.00000000000000000000000000000000000000000000000000003966 196.0
DYD1_k127_3255919_16 Bacterial regulatory proteins, tetR family - - - 0.00000000000000000000000000000000000000000000000000006455 193.0
DYD1_k127_3255919_17 - - - - 0.00000000000000000000000000001943 126.0
DYD1_k127_3255919_18 Nitrite reductase K15864 - 1.7.2.1,1.7.99.1 0.0000000000000000000000000164 113.0
DYD1_k127_3255919_19 Periplasmic copper-binding protein (NosD) - - - 0.00000000000000000005538 106.0
DYD1_k127_3255919_2 Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain (MocR family) and their eukaryotic orthologs K00375,K05825 - - 9.918e-216 688.0
DYD1_k127_3255919_20 Plasmid stabilization system - GO:0006950,GO:0006974,GO:0007154,GO:0008150,GO:0009432,GO:0009605,GO:0009987,GO:0009991,GO:0031668,GO:0033554,GO:0050896,GO:0051716,GO:0071496 - 0.0000000000000000005943 91.0
DYD1_k127_3255919_21 Sigma-70, region 4 K03088 - - 0.0000000000000002741 86.0
DYD1_k127_3255919_22 Putative Flp pilus-assembly TadE/G-like - - - 0.00000000000004008 87.0
DYD1_k127_3255919_23 .,Oxidizes proline to glutamate for use as a carbon and nitrogen source - - - 0.0000000000001659 74.0
DYD1_k127_3255919_3 COG1680 Beta-lactamase class C and other penicillin binding - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001017 504.0
DYD1_k127_3255919_4 receptor K16087 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004599 477.0
DYD1_k127_3255919_5 serine-type peptidase activity K01990,K08884,K12132,K18912 - 1.14.99.50,2.7.11.1 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004095 477.0
DYD1_k127_3255919_6 COG0477 Permeases of the major facilitator superfamily - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004072 406.0
DYD1_k127_3255919_7 COG0457 FOG TPR repeat - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006178 401.0
DYD1_k127_3255919_8 Lytic transglycosylase with a strong preference for naked glycan strands that lack stem peptides - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001477 413.0
DYD1_k127_3255919_9 Nitrilase cyanide hydratase and apolipoprotein N-acyltransferase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005651 349.0
DYD1_k127_3259756_0 COG0339 Zn-dependent oligopeptidases K01284 GO:0003674,GO:0003824,GO:0004180,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006508,GO:0006807,GO:0008150,GO:0008152,GO:0008233,GO:0008238,GO:0016787,GO:0019538,GO:0030288,GO:0030313,GO:0031975,GO:0042597,GO:0043170,GO:0044238,GO:0044424,GO:0044444,GO:0044464,GO:0070011,GO:0071704,GO:0140096,GO:1901564 3.4.15.5 0.0 1081.0
DYD1_k127_3259756_1 PFAM Pyridoxal-5'-phosphate-dependent protein beta subunit K01738 GO:0000096,GO:0000097,GO:0003674,GO:0003824,GO:0004124,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006082,GO:0006520,GO:0006534,GO:0006535,GO:0006563,GO:0006790,GO:0006807,GO:0008144,GO:0008150,GO:0008152,GO:0008652,GO:0009058,GO:0009069,GO:0009070,GO:0009987,GO:0016053,GO:0016740,GO:0016765,GO:0019344,GO:0019752,GO:0019842,GO:0030170,GO:0036094,GO:0043167,GO:0043168,GO:0043436,GO:0044237,GO:0044238,GO:0044249,GO:0044272,GO:0044281,GO:0044283,GO:0044424,GO:0044464,GO:0046394,GO:0048037,GO:0050662,GO:0070279,GO:0071704,GO:0097159,GO:1901363,GO:1901564,GO:1901566,GO:1901576,GO:1901605,GO:1901607 2.5.1.47 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008149 475.0
DYD1_k127_3259756_2 bacterial-type flagellum-dependent cell motility - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000765 403.0
DYD1_k127_3259756_3 SAM-dependent K06969 - 2.1.1.191 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000427 298.0
DYD1_k127_3259756_4 FG-GAP repeat - - - 0.00000000000000000000000000000000000008302 166.0
DYD1_k127_3259756_5 Acid phosphatase - GO:0005575,GO:0005623,GO:0009279,GO:0016020,GO:0019867,GO:0030312,GO:0030313,GO:0031975,GO:0044462,GO:0044464,GO:0071944 - 0.0000000000000000000000000003396 124.0
DYD1_k127_3259756_6 Transcriptional regulator - - - 0.00000109 58.0
DYD1_k127_3275028_0 von Willebrand factor, type A K11912 - 2.7.11.1 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005242 415.0
DYD1_k127_3275028_1 Transcriptional regulatory protein, C terminal - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003089 302.0
DYD1_k127_3275028_2 Histidine kinase - - - 0.000000000000000000000000000000000000001564 154.0
DYD1_k127_3275028_3 metal-dependent hydrolase with the TIM-barrel fold - - - 0.0000000000000000000000000000000000005097 143.0
DYD1_k127_3275028_4 PFAM PspA IM30 - - - 0.000000000000000000000000000002824 128.0
DYD1_k127_3275028_5 - - - - 0.0000000000000000000000001187 114.0
DYD1_k127_3293995_0 Beta-eliminating lyase K01667 - 4.1.99.1 8.924e-209 657.0
DYD1_k127_3293995_1 catalyzes the formation of indole and pyruvate from tryptophan K01668 - 4.1.99.2 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003389 344.0
DYD1_k127_3293995_2 helix_turn_helix ASNC type K05800 - - 0.00000000000000000000000000000000003497 139.0
DYD1_k127_331618_0 Belongs to the class-I pyridine nucleotide-disulfide oxidoreductase family K00383 - 1.8.1.7 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007262 544.0
DYD1_k127_331618_1 PA domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004887 563.0
DYD1_k127_3327182_0 3'-5' exoribonuclease that releases 5'-nucleoside monophosphates and is involved in maturation of structured RNAs K12573 - - 6.419e-241 764.0
DYD1_k127_3327182_1 This protein is involved in the repair of mismatches in DNA. It is required for dam-dependent methyl-directed DNA mismatch repair. May act as a molecular matchmaker , a protein that promotes the formation of a stable complex between two or more DNA-binding proteins in an ATP-dependent manner without itself being part of a final effector complex K03572 - - 9.155e-204 653.0
DYD1_k127_3327182_10 HflC and HflK could encode or regulate a protease K04088 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000323 316.0
DYD1_k127_3327182_11 Belongs to the pseudouridine synthase RsuA family K06178 GO:0000154,GO:0000455,GO:0001522,GO:0003674,GO:0003824,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006139,GO:0006364,GO:0006396,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0009451,GO:0009982,GO:0009987,GO:0010467,GO:0016070,GO:0016072,GO:0016853,GO:0016866,GO:0022613,GO:0031118,GO:0034470,GO:0034641,GO:0034660,GO:0042254,GO:0043170,GO:0043412,GO:0044085,GO:0044237,GO:0044238,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0071704,GO:0071840,GO:0090304,GO:1901360 5.4.99.22 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008628 303.0
DYD1_k127_3327182_12 transcriptional regulator - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000192 296.0
DYD1_k127_3327182_13 HflC and HflK could regulate a protease K04087 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000001968 286.0
DYD1_k127_3327182_14 Specifically methylates the ribose of guanosine 2251 in 23S rRNA K03218 GO:0000154,GO:0000451,GO:0000453,GO:0001510,GO:0003674,GO:0003824,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006139,GO:0006364,GO:0006396,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0008168,GO:0008171,GO:0008173,GO:0008649,GO:0008757,GO:0009451,GO:0009987,GO:0010467,GO:0016070,GO:0016072,GO:0016435,GO:0016740,GO:0016741,GO:0022613,GO:0031167,GO:0032259,GO:0034470,GO:0034641,GO:0034660,GO:0042254,GO:0043170,GO:0043412,GO:0043414,GO:0044085,GO:0044237,GO:0044238,GO:0044260,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0070039,GO:0071704,GO:0071840,GO:0090304,GO:0140098,GO:0140102,GO:1901360 2.1.1.185 0.000000000000000000000000000000000000000000000000000000000000000000000000005326 260.0
DYD1_k127_3327182_15 Participates in chromosomal partition during cell division. May act via the formation of a condensin-like complex containing Smc and ScpA that pull DNA away from mid-cell into both cell halves K06024 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000009845 252.0
DYD1_k127_3327182_16 Polysaccharide deacetylase - - - 0.000000000000000000000000000000000000000000000000000000000000000000002764 246.0
DYD1_k127_3327182_17 Metal-dependent phosphohydrolase K06950 - - 0.000000000000000000000000000000000000000000000000000000000000003784 228.0
DYD1_k127_3327182_18 deaminase - - - 0.0000000000000000000000000000000000000000000000000000002114 200.0
DYD1_k127_3327182_19 COG4967 Tfp pilus assembly protein PilV K02671 - - 0.00000000000000000000000000000000000000000000001433 194.0
DYD1_k127_3327182_2 Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family - - - 2.881e-196 625.0
DYD1_k127_3327182_20 Threonylcarbamoyl adenosine biosynthesis protein TsaE K06925 - - 0.0000000000000000000000000000000000003209 146.0
DYD1_k127_3327182_21 RNA chaperone that binds small regulatory RNA (sRNAs) and mRNAs to facilitate mRNA translational regulation in response to envelope stress, environmental stress and changes in metabolite concentrations. Also binds with high specificity to tRNAs K03666 GO:0003674,GO:0003676,GO:0003677,GO:0003681,GO:0003723,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006139,GO:0006378,GO:0006396,GO:0006397,GO:0006417,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0009889,GO:0009890,GO:0009891,GO:0009892,GO:0009893,GO:0009987,GO:0010467,GO:0010468,GO:0010556,GO:0010557,GO:0010558,GO:0010604,GO:0010605,GO:0010608,GO:0010628,GO:0010629,GO:0016043,GO:0016070,GO:0016071,GO:0016246,GO:0016441,GO:0016458,GO:0017148,GO:0019222,GO:0022607,GO:0022613,GO:0022618,GO:0030423,GO:0031047,GO:0031123,GO:0031124,GO:0031323,GO:0031324,GO:0031325,GO:0031326,GO:0031327,GO:0031328,GO:0032268,GO:0032269,GO:0032270,GO:0034248,GO:0034249,GO:0034250,GO:0034622,GO:0034641,GO:0035194,GO:0040029,GO:0040033,GO:0043170,GO:0043631,GO:0043933,GO:0044085,GO:0044237,GO:0044238,GO:0044424,GO:0044444,GO:0044464,GO:0045727,GO:0045974,GO:0045975,GO:0046483,GO:0048518,GO:0048519,GO:0048522,GO:0048523,GO:0050789,GO:0050794,GO:0051171,GO:0051172,GO:0051173,GO:0051246,GO:0051247,GO:0051248,GO:0060255,GO:0065003,GO:0065007,GO:0071704,GO:0071826,GO:0071840,GO:0080090,GO:0090304,GO:0097159,GO:1901360,GO:1901363,GO:2000112,GO:2000113 - 0.000000000000000000000000000000000007806 137.0
DYD1_k127_3327182_22 Pilus assembly protein PilX - - - 0.000000000000000000000000001507 128.0
DYD1_k127_3327182_23 prepilin peptidase dependent protein K02680 - - 0.00000000000003998 81.0
DYD1_k127_3327182_24 Participates in chromosomal partition during cell division. May act via the formation of a condensin-like complex containing Smc and ScpB that pull DNA away from mid-cell into both cell halves K05896 - - 0.00000000003746 66.0
DYD1_k127_3327182_25 protein conserved in bacteria K09937 - - 0.0000000001311 63.0
DYD1_k127_3327182_3 Plays an important role in the de novo pathway of purine nucleotide biosynthesis. Catalyzes the first committed step in the biosynthesis of AMP from IMP K01939 - 6.3.4.4 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001309 598.0
DYD1_k127_3327182_4 Catalyzes the conversion of epoxyqueuosine (oQ) to queuosine (Q), which is a hypermodified base found in the wobble positions of tRNA(Asp), tRNA(Asn), tRNA(His) and tRNA(Tyr) K18979 - 1.17.99.6 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004055 512.0
DYD1_k127_3327182_5 Bifunctional enzyme that catalyzes the epimerization of the S- and R-forms of NAD(P)HX and the dehydration of the S-form of NAD(P)HX at the expense of ADP, which is converted to AMP. This allows the repair of both epimers of NAD(P)HX, a damaged form of NAD(P)H that is a result of enzymatic or heat-dependent hydration K17758,K17759 - 4.2.1.136,5.1.99.6 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007736 466.0
DYD1_k127_3327182_6 N-acetylmuramoyl-L-alanine amidase K01448 GO:0000003,GO:0000910,GO:0003674,GO:0003824,GO:0005575,GO:0005623,GO:0007049,GO:0008150,GO:0008745,GO:0009987,GO:0016787,GO:0016810,GO:0016811,GO:0019954,GO:0022402,GO:0022414,GO:0030288,GO:0030313,GO:0031975,GO:0032505,GO:0042597,GO:0043093,GO:0044464,GO:0051301,GO:0061783 3.5.1.28 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004328 428.0
DYD1_k127_3327182_7 GTPase that associates with the 50S ribosomal subunit and may have a role during protein synthesis or ribosome biogenesis K03665 GO:0000166,GO:0001882,GO:0001883,GO:0003674,GO:0003676,GO:0003723,GO:0003824,GO:0003924,GO:0005488,GO:0005524,GO:0005525,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006412,GO:0006414,GO:0006417,GO:0006464,GO:0006468,GO:0006518,GO:0006793,GO:0006796,GO:0006807,GO:0006950,GO:0006996,GO:0008144,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009266,GO:0009408,GO:0009628,GO:0009889,GO:0009987,GO:0010467,GO:0010468,GO:0010556,GO:0010608,GO:0016043,GO:0016310,GO:0016462,GO:0016787,GO:0016817,GO:0016818,GO:0016887,GO:0017076,GO:0017111,GO:0018105,GO:0018193,GO:0018209,GO:0019001,GO:0019222,GO:0019538,GO:0019843,GO:0022411,GO:0030554,GO:0031323,GO:0031326,GO:0032268,GO:0032549,GO:0032550,GO:0032553,GO:0032555,GO:0032559,GO:0032561,GO:0032790,GO:0032984,GO:0032988,GO:0034248,GO:0034641,GO:0034645,GO:0035639,GO:0036094,GO:0036211,GO:0036289,GO:0043021,GO:0043022,GO:0043023,GO:0043043,GO:0043167,GO:0043168,GO:0043170,GO:0043412,GO:0043603,GO:0043604,GO:0043933,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044424,GO:0044444,GO:0044464,GO:0044877,GO:0046777,GO:0050789,GO:0050794,GO:0050896,GO:0051171,GO:0051246,GO:0060255,GO:0065007,GO:0071704,GO:0071826,GO:0071840,GO:0072344,GO:0080090,GO:0097159,GO:0097367,GO:1901265,GO:1901363,GO:1901564,GO:1901566,GO:1901576,GO:1903008,GO:2000112 - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003308 417.0
DYD1_k127_3327182_8 Catalyzes the attachment of glutamate to tRNA(Glu) in a two-step reaction glutamate is first activated by ATP to form Glu-AMP and then transferred to the acceptor end of tRNA(Glu) K01885 - 6.1.1.17 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002129 375.0
DYD1_k127_3327182_9 Catalyzes the transfer of a dimethylallyl group onto the adenine at position 37 in tRNAs that read codons beginning with uridine, leading to the formation of N6-(dimethylallyl)adenosine (i(6)A) K00791 GO:0003674,GO:0003824,GO:0006139,GO:0006396,GO:0006399,GO:0006400,GO:0006725,GO:0006807,GO:0008033,GO:0008150,GO:0008152,GO:0009451,GO:0009987,GO:0010467,GO:0016070,GO:0016740,GO:0016765,GO:0034470,GO:0034641,GO:0034660,GO:0043170,GO:0043412,GO:0044237,GO:0044238,GO:0046483,GO:0052381,GO:0071704,GO:0090304,GO:0140098,GO:0140101,GO:1901360 2.5.1.75 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005967 332.0
DYD1_k127_334451_0 Belongs to the pirin family K06911 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001722 338.0
DYD1_k127_334451_1 Glutathione-dependent formaldehyde-activating enzyme - - - 0.000000000000000000000000000000000000000000000000000000000000000000003792 238.0
DYD1_k127_334451_2 PFAM Protein-tyrosine phosphatase, low molecular weight K03741 - 1.20.4.1 0.0000000000000000000000000000000000000000000000000000002191 201.0
DYD1_k127_334451_3 Tetratricopeptide repeat - - - 0.0000000000000000000000000000000000000000000004221 189.0
DYD1_k127_334451_4 COG1473 Metal-dependent amidase aminoacylase carboxypeptidase - - - 0.000000000000000000000002265 110.0
DYD1_k127_334451_5 Adenylate cyclase - - - 0.0000000000000000003524 102.0
DYD1_k127_334451_6 - - - - 0.00000001015 66.0
DYD1_k127_3357349_0 Forms oxaloacetate, a four-carbon dicarboxylic acid source for the tricarboxylic acid cycle K01595 GO:0003674,GO:0003824,GO:0004611,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0008964,GO:0016829,GO:0016830,GO:0016831,GO:0044424,GO:0044444,GO:0044464 4.1.1.31 6.882e-254 811.0
DYD1_k127_3357349_1 PFAM Major Facilitator Superfamily - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003807 526.0
DYD1_k127_3357349_2 PFAM Glycoside hydrolase, family 37 K01194 - 3.2.1.28 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008421 510.0
DYD1_k127_3357349_3 amine dehydrogenase activity - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002794 340.0
DYD1_k127_3357349_4 amidohydrolase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001741 329.0
DYD1_k127_3357349_5 TonB dependent receptor - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000001526 289.0
DYD1_k127_3357349_6 Domain of unknown function (DUF3327) K07214 - - 0.00000000000000000000000000000000000000000000000000000000000000000000002094 249.0
DYD1_k127_3357349_7 PKHD-type hydroxylase K07336 - - 0.000000000000000000000000000000000000000000000000000000000000001553 225.0
DYD1_k127_3357349_8 - - - - 0.000000000000000000000000000000000000000000000000000000000005195 224.0
DYD1_k127_3357349_9 6-phosphogluconolactonase activity - - - 0.000000000000005155 88.0
DYD1_k127_3376951_0 Domain of unknown function (DUF3458_C) ARM repeats K01256 - 3.4.11.2 9.676e-313 981.0
DYD1_k127_3376951_1 NAD-binding protein involved in the addition of a carboxymethylaminomethyl (cmnm) group at the wobble position (U34) of certain tRNAs, forming tRNA-cmnm(5)s(2)U34 K03495 GO:0000166,GO:0001510,GO:0002097,GO:0002098,GO:0003674,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006139,GO:0006396,GO:0006399,GO:0006400,GO:0006725,GO:0006807,GO:0008033,GO:0008150,GO:0008152,GO:0009451,GO:0009987,GO:0010467,GO:0016070,GO:0030488,GO:0032259,GO:0034470,GO:0034641,GO:0034660,GO:0036094,GO:0043167,GO:0043168,GO:0043170,GO:0043412,GO:0043414,GO:0044237,GO:0044238,GO:0044260,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0048037,GO:0050660,GO:0050662,GO:0071704,GO:0090304,GO:0097159,GO:1901265,GO:1901360,GO:1901363 - 1.034e-282 887.0
DYD1_k127_3376951_10 N-formylglutamate amidohydrolase K01458,K01479 - 3.5.1.68,3.5.3.8 0.0000000000000000000000000000000000000000000000000000000000000000000001533 248.0
DYD1_k127_3376951_11 Pyrophosphatase that catalyzes the hydrolysis of nucleoside triphosphates to their monophosphate derivatives, with a high preference for the non-canonical purine nucleotides XTP (xanthosine triphosphate), dITP (deoxyinosine triphosphate) and ITP. Seems to function as a house-cleaning enzyme that removes non-canonical purine nucleotides from the nucleotide pool, thus preventing their incorporation into DNA RNA and avoiding chromosomal lesions K02428 - 3.6.1.66 0.000000000000000000000000000000000000000000000000000000000000000000001583 243.0
DYD1_k127_3376951_12 Protein of unknown function (DUF938) - - - 0.00000000000000000000000000000000000000000000000000000000003081 212.0
DYD1_k127_3376951_13 Pilus assembly protein, PilO K02664 - - 0.000000000000000000000000000000000000000000000000000000003301 206.0
DYD1_k127_3376951_14 Diguanylate cyclase K08968 - 1.8.4.14 0.0000000000000000000000000000000000000000000000000000009004 197.0
DYD1_k127_3376951_15 pilus assembly protein pilp K02665 - - 0.0000000000000000000000000000000000000002981 157.0
DYD1_k127_3376951_16 assembly protein (PilN) K02663 - - 0.00000000000000000000000000000000000001784 151.0
DYD1_k127_3376951_17 - - - - 0.00000000000000000000000000000000000003039 151.0
DYD1_k127_3376951_18 Ribosomal protein L31 K02909 - - 0.0000000000000000000000000000000000000341 144.0
DYD1_k127_3376951_19 phosphoglycerate mutase - - - 0.000000000000000000006145 101.0
DYD1_k127_3376951_2 TIGRFAM penicillin-binding protein, 1A K05366 - 2.4.1.129,3.4.16.4 3.603e-257 817.0
DYD1_k127_3376951_20 - - - - 0.000000000000005078 85.0
DYD1_k127_3376951_21 Glutathione S-transferase K00799,K11209 - 2.5.1.18 0.00004342 47.0
DYD1_k127_3376951_3 Belongs to the citrate synthase family K01647 - 2.3.3.1 9.334e-194 612.0
DYD1_k127_3376951_4 TIGRFAM type IV pilus secretin (or competence protein) PilQ K02666 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001657 540.0
DYD1_k127_3376951_5 Involved in the biosynthesis of porphyrin-containing compound - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004832 437.0
DYD1_k127_3376951_6 Amidohydrolase family K05603 - 3.5.3.13 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001574 425.0
DYD1_k127_3376951_7 Phosphorolytic exoribonuclease that removes nucleotide residues following the -CCA terminus of tRNA and adds nucleotides to the ends of RNA molecules by using nucleoside diphosphates as substrates K00989 GO:0006139,GO:0006401,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0009056,GO:0009057,GO:0009987,GO:0016070,GO:0016072,GO:0016075,GO:0019439,GO:0034641,GO:0034655,GO:0034660,GO:0034661,GO:0043170,GO:0044237,GO:0044238,GO:0044248,GO:0044260,GO:0044265,GO:0044270,GO:0046483,GO:0046700,GO:0071704,GO:0090304,GO:1901360,GO:1901361,GO:1901575 2.7.7.56 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003905 358.0
DYD1_k127_3376951_8 Pilus assembly protein K02662 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001335 359.0
DYD1_k127_3376951_9 dehydratase K01754 - 4.3.1.19 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000001133 301.0
DYD1_k127_3409527_0 Oxidizes proline to glutamate for use as a carbon and nitrogen source K13821 - 1.2.1.88,1.5.5.2 0.0 1239.0
DYD1_k127_3409527_1 electron transport coupled proton transport - - - 8.655e-281 872.0
DYD1_k127_3409527_10 PFAM Cytochrome c oxidase assembly protein CtaG Cox11 K02258 - - 0.000000000000000000000000000000000000000003177 162.0
DYD1_k127_3409527_11 Domain of unknown function (DUF1820) - - - 0.00000000000000000000000000000000000002038 148.0
DYD1_k127_3409527_12 SURF1-like protein - - - 0.00000000000000000000000000000000002011 144.0
DYD1_k127_3409527_13 Sulfurtransferase - - - 0.000000000000000000000001456 109.0
DYD1_k127_3409527_14 signal sequence binding - - - 0.0000000000000000006028 96.0
DYD1_k127_3409527_15 Protein of unknown function (DUF2909) - - - 0.0000000000000008811 79.0
DYD1_k127_3409527_16 One of the proteins required for the normal export of preproteins out of the cell cytoplasm. It is a molecular chaperone that binds to a subset of precursor proteins, maintaining them in a translocation-competent state. It also specifically binds to its receptor SecA K03071 - - 0.000000000009821 70.0
DYD1_k127_3409527_17 COG5488 Integral membrane protein - - - 0.0000000001108 69.0
DYD1_k127_3409527_18 Type II secretion system protein B K02451 - - 0.00001972 57.0
DYD1_k127_3409527_2 Catalyzes the interconversion of 2-phosphoglycerate and 3-phosphoglycerate K15633 - 5.4.2.12 2.24e-199 636.0
DYD1_k127_3409527_3 Heme copper-type cytochrome quinol oxidase subunit 3 K02276 - 1.9.3.1 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004007 420.0
DYD1_k127_3409527_4 Subunits I and II form the functional core of the enzyme complex. Electrons originating in cytochrome c are transferred via heme a and Cu(A) to the binuclear center formed by heme a3 and Cu(B) K02275 - 1.9.3.1 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003857 420.0
DYD1_k127_3409527_5 AAA domain K02450 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006196 426.0
DYD1_k127_3409527_6 Belongs to the peptidase S41A family K03797 - 3.4.21.102 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006115 359.0
DYD1_k127_3409527_7 cytochrome oxidase assembly K02259 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003587 324.0
DYD1_k127_3409527_8 Converts heme B (protoheme IX) to heme O by substitution of the vinyl group on carbon 2 of heme B porphyrin ring with a hydroxyethyl farnesyl side group K02257 GO:0003674,GO:0003824,GO:0004311,GO:0004659,GO:0005575,GO:0005623,GO:0005886,GO:0006091,GO:0006725,GO:0006778,GO:0006779,GO:0006783,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009987,GO:0015980,GO:0016020,GO:0016740,GO:0016765,GO:0018130,GO:0019438,GO:0033013,GO:0033014,GO:0034641,GO:0042168,GO:0042440,GO:0044237,GO:0044249,GO:0044271,GO:0044464,GO:0045333,GO:0046148,GO:0046483,GO:0051186,GO:0051188,GO:0055114,GO:0071704,GO:0071944,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576 2.5.1.141 0.000000000000000000000000000000000000000000000000000000000000003024 222.0
DYD1_k127_3409527_9 membrane protein (homolog of Drosophila rhomboid) - - - 0.00000000000000000000000000000000000000000001761 179.0
DYD1_k127_3417845_0 OsmC-like protein - - - 0.00000000000000000000000000000000000000000000000000000001266 201.0
DYD1_k127_3417845_1 Protein of unknown function, DUF393 - - - 0.0000000000000000000000000000000000000000000000000000001005 199.0
DYD1_k127_3417845_2 PFAM NnrU protein - - - 0.0000000000000000000000000000000000000006704 151.0
DYD1_k127_3417845_3 Hemimethylated DNA-binding protein YccV like K11940 - - 0.000000000000000000000000000000000000005925 159.0
DYD1_k127_3417845_4 Protein of unknown function (DUF1295) - - - 0.00000000000000000000000007214 113.0
DYD1_k127_3417845_6 Bacterial protein of unknown function (DUF924) - - - 0.00001091 48.0
DYD1_k127_3480635_0 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003564 436.0
DYD1_k127_3480635_1 involved in molybdopterin and thiamine biosynthesis family 2 K21029 - 2.7.7.80 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002826 359.0
DYD1_k127_3480635_2 P COG1629 Outer membrane receptor proteins, mostly Fe transport - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001762 336.0
DYD1_k127_3480635_3 Transcriptional regulatory protein, C terminal - - - 0.000000000000000000000000000000000000000000000000001336 187.0
DYD1_k127_3480635_4 Adenylate cyclase - - - 0.00000000000000000000000000000000001345 154.0
DYD1_k127_3480635_5 cellulose binding - - - 0.000000000000000000000000000000002417 135.0
DYD1_k127_3480635_6 Putative transposase - - - 0.000001289 52.0
DYD1_k127_3489622_0 Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family - - - 0.0 1086.0
DYD1_k127_3489622_1 Involved in the biosynthesis of the osmoprotectant glycine betaine. Catalyzes the oxidation of choline to betaine aldehyde and betaine aldehyde to glycine betaine at the same rate K00108 - 1.1.99.1 4.365e-200 636.0
DYD1_k127_3489622_2 PFAM peptidase M48 Ste24p - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005636 589.0
DYD1_k127_3489622_3 ATP ADP translocase K03301 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000001685 279.0
DYD1_k127_3489622_4 LemA family K03744 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000001118 265.0
DYD1_k127_3489622_5 Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family - - - 0.000000000000000000000000000000000000000000000000000000000000003528 229.0
DYD1_k127_3507099_0 Amidohydrolase family - - - 1.223e-243 762.0
DYD1_k127_3507099_1 Multicopper oxidase K22348 - 1.16.3.3 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002503 610.0
DYD1_k127_3507099_2 COG1668 ABC-type Na efflux pump, permease component K09696 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002997 330.0
DYD1_k127_3507099_3 abc transporter atp-binding protein K09697 - 3.6.3.7 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009531 319.0
DYD1_k127_3507099_4 Outer membrane efflux protein - - - 0.0000000000000000000000000000000000000000000000000000000005857 220.0
DYD1_k127_3507099_5 PFAM alkyl hydroperoxide reductase Thiol specific antioxidant Mal allergen K03564 - 1.11.1.15 0.0000000000000000000000000000000000000000000000001134 184.0
DYD1_k127_3507099_6 hydrolases or acyltransferases (alpha beta hydrolase superfamily) - - - 0.0000000000004266 70.0
DYD1_k127_3551885_0 Adenylate cyclase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003193 424.0
DYD1_k127_3551885_1 cAMP biosynthetic process - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000003671 289.0
DYD1_k127_3551885_2 Has lipid A 3-O-deacylase activity. Hydrolyzes the ester bond at the 3 position of lipid A, a bioactive component of lipopolysaccharide (LPS), thereby releasing the primary fatty acyl moiety - - - 0.000000003035 63.0
DYD1_k127_3567969_0 Bacterial protein of unknown function (DUF885) - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000002407 306.0
DYD1_k127_3567969_1 Protein of unknown function (DUF3014) - - - 0.00000000000000000000000000000000000000001637 164.0
DYD1_k127_3567969_2 Aminoacyl-tRNA editing domain K19055 - - 0.000000000000000000000000000000000000001235 154.0
DYD1_k127_3567969_3 exo-alpha-(2->6)-sialidase activity - - - 0.0000000000000000001398 104.0
DYD1_k127_3567969_4 peptidase activity, acting on L-amino acid peptides K01337,K01400,K20276 - 3.4.21.50,3.4.24.28 0.0000000000000001434 94.0
DYD1_k127_3567969_5 Proprotein convertase P-domain - - - 0.00000000004881 76.0
DYD1_k127_3567969_6 - - - - 0.00000004115 64.0
DYD1_k127_3570801_0 Phosphate-binding protein K02040 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004072 481.0
DYD1_k127_3570801_1 Belongs to the GppA Ppx family K01524 - 3.6.1.11,3.6.1.40 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002809 464.0
DYD1_k127_3570801_2 Histidine kinase K07636 - 2.7.13.3 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001158 348.0
DYD1_k127_3570801_3 Putative porin - GO:0005575,GO:0005623,GO:0009279,GO:0016020,GO:0019867,GO:0030312,GO:0030313,GO:0031975,GO:0044462,GO:0044464,GO:0071944 - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004525 326.0
DYD1_k127_3570801_4 Functions as both a chaperone and a metalloprotease. Maintains the integrity of the outer membrane by promoting either the assembly or the elimination of outer membrane proteins, depending on their folding state - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001167 323.0
DYD1_k127_3570801_5 phosphate regulon transcriptional regulatory protein PhoB K07657 GO:0001098,GO:0001108,GO:0003674,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006355,GO:0008150,GO:0009889,GO:0010468,GO:0010556,GO:0019219,GO:0019222,GO:0031323,GO:0031326,GO:0042802,GO:0043254,GO:0044087,GO:0044424,GO:0044464,GO:0050789,GO:0050794,GO:0051128,GO:0051171,GO:0051252,GO:0060255,GO:0065007,GO:0080090,GO:1903506,GO:2000112,GO:2000142,GO:2001141 - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000002817 297.0
DYD1_k127_3570801_6 Elongation factor P--(R)-beta-lysine ligase K04568 - - 0.00000000000000000000000000000000000007198 146.0
DYD1_k127_3570801_7 sulfur relay protein TusD DsrE K07235 - - 0.00000000008998 67.0
DYD1_k127_3570801_8 Belongs to the DsrF TusC family K07236 GO:0002097,GO:0002098,GO:0002143,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006139,GO:0006396,GO:0006399,GO:0006400,GO:0006725,GO:0006807,GO:0008033,GO:0008150,GO:0008152,GO:0009451,GO:0009987,GO:0010467,GO:0016070,GO:0032991,GO:0034227,GO:0034470,GO:0034641,GO:0034660,GO:0043170,GO:0043412,GO:0044237,GO:0044238,GO:0044424,GO:0044444,GO:0044445,GO:0044464,GO:0046483,GO:0071704,GO:0090304,GO:1901360,GO:1902494,GO:1990228,GO:1990234 - 0.00004244 52.0
DYD1_k127_3572409_0 uracil phosphoribosyltransferase K00761 - 2.4.2.9 0.0000000000000000000000000000000000000000000000000000000000000000000000000003539 261.0
DYD1_k127_3572409_1 TIGRFAM DJ-1 family protein K03152 - 3.5.1.124 0.00000000000000000000000000000000000000000000000000003427 192.0
DYD1_k127_3572409_2 PFAM beta-lactamase domain protein K07576 - - 0.00000000000000000000000000000000001469 145.0
DYD1_k127_3582606_0 metal-dependent hydrolase with the TIM-barrel fold - - - 2.385e-245 772.0
DYD1_k127_3582606_1 MatE - GO:0003674,GO:0005215,GO:0005575,GO:0005623,GO:0005886,GO:0006810,GO:0006811,GO:0006820,GO:0006857,GO:0006862,GO:0008150,GO:0008509,GO:0008514,GO:0015075,GO:0015215,GO:0015230,GO:0015605,GO:0015711,GO:0015748,GO:0015833,GO:0015931,GO:0015932,GO:0016020,GO:0022857,GO:0034220,GO:0035350,GO:0035442,GO:0035672,GO:0035673,GO:0042886,GO:0042887,GO:0042938,GO:0044464,GO:0044610,GO:0051179,GO:0051181,GO:0051182,GO:0051184,GO:0051185,GO:0051234,GO:0055085,GO:0071702,GO:0071705,GO:0071916,GO:0071944,GO:0098656,GO:1901264,GO:1901505,GO:1901679,GO:1904680 - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002465 510.0
DYD1_k127_3582606_2 Adenylate cyclase - - - 0.000000000000000000000000000000000000000000000000000000000004821 225.0
DYD1_k127_3582606_3 peptidyl-tyrosine sulfation K13992 - - 0.00000000000000000000000000000000001161 146.0
DYD1_k127_3594363_0 Belongs to the CarB family K01955 - 6.3.5.5 0.0 1176.0
DYD1_k127_3594363_1 Heat shock 70 kDa protein K04043 - - 3.318e-312 966.0
DYD1_k127_3594363_2 Belongs to the CarA family K01956 - 6.3.5.5 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003288 546.0
DYD1_k127_3594363_3 ATP binding to DnaK triggers the release of the substrate protein, thus completing the reaction cycle. Several rounds of ATP-dependent interactions between DnaJ, DnaK and GrpE are required for fully efficient folding. Also involved, together with DnaK and GrpE, in the DNA replication of plasmids through activation of initiation proteins K03686 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005728 497.0
DYD1_k127_3594363_4 May be involved in recombinational repair of damaged DNA K03631 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004872 390.0
DYD1_k127_3594363_5 Belongs to the Fur family K03711 - - 0.00000000000000000000000000000000000000000000000000000001784 199.0
DYD1_k127_3594363_6 Catalyzes the conversion of 4-hydroxy- tetrahydrodipicolinate (HTPA) to tetrahydrodipicolinate K00215 GO:0003674,GO:0003824,GO:0006082,GO:0006520,GO:0006807,GO:0008150,GO:0008152,GO:0008652,GO:0008839,GO:0009058,GO:0009987,GO:0016053,GO:0016491,GO:0016627,GO:0016628,GO:0019752,GO:0019877,GO:0043436,GO:0043648,GO:0043650,GO:0044237,GO:0044238,GO:0044249,GO:0044281,GO:0044283,GO:0046394,GO:0046451,GO:0055114,GO:0071704,GO:1901564,GO:1901566,GO:1901576 1.17.1.8 0.000000000000000000000000000000000000282 150.0
DYD1_k127_3594363_7 Participates actively in the response to hyperosmotic and heat shock by preventing the aggregation of stress-denatured proteins, in association with DnaK and GrpE. It is the nucleotide exchange factor for DnaK and may function as a thermosensor. Unfolded proteins bind initially to DnaJ K03687 - - 0.000000000000000000000000000000000001848 146.0
DYD1_k127_3594363_8 Part of the outer membrane protein assembly complex, which is involved in assembly and insertion of beta-barrel proteins into the outer membrane K06186 - - 0.00000000000000000000002294 107.0
DYD1_k127_3613591_0 Cell division protein that is involved in the assembly of the Z ring. May serve as a membrane anchor for the Z ring K03590 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008406 576.0
DYD1_k127_3613591_1 Belongs to the MurCDEF family K01924 - 6.3.2.8 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009715 579.0
DYD1_k127_3613591_2 First step of the lipid cycle reactions in the biosynthesis of the cell wall peptidoglycan K01000 GO:0000270,GO:0003674,GO:0003824,GO:0005575,GO:0006022,GO:0006023,GO:0006024,GO:0006807,GO:0008150,GO:0008152,GO:0008963,GO:0009058,GO:0009059,GO:0009252,GO:0009273,GO:0009987,GO:0016020,GO:0016740,GO:0016772,GO:0016780,GO:0030203,GO:0034645,GO:0042546,GO:0043170,GO:0044036,GO:0044038,GO:0044085,GO:0044237,GO:0044249,GO:0044260,GO:0070589,GO:0071554,GO:0071704,GO:0071840,GO:1901135,GO:1901137,GO:1901564,GO:1901566,GO:1901576 2.7.8.13 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004549 512.0
DYD1_k127_3613591_3 Essential cell division protein that forms a contractile ring structure (Z ring) at the future cell division site. The regulation of the ring assembly controls the timing and the location of cell division. One of the functions of the FtsZ ring is to recruit other cell division proteins to the septum to produce a new cell wall between the dividing cells. Binds GTP and shows GTPase activity K03531 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002911 493.0
DYD1_k127_3613591_4 Catalyzes the hydrolysis of UDP-3-O-myristoyl-N- acetylglucosamine to form UDP-3-O-myristoylglucosamine and acetate, the committed step in lipid A biosynthesis K02535 - 3.5.1.108 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006798 450.0
DYD1_k127_3613591_5 Cell wall formation. Catalyzes the transfer of a GlcNAc subunit on undecaprenyl-pyrophosphoryl-MurNAc-pentapeptide (lipid intermediate I) to form undecaprenyl-pyrophosphoryl-MurNAc- (pentapeptide)GlcNAc (lipid intermediate II) K02563 - 2.4.1.227 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001272 410.0
DYD1_k127_3613591_6 Involved in cell wall formation. Catalyzes the final step in the synthesis of UDP-N-acetylmuramoyl-pentapeptide, the precursor of murein K01929 - 6.3.2.10 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007581 402.0
DYD1_k127_3613591_7 Peptidoglycan polymerase that is essential for cell division K03588 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006886 355.0
DYD1_k127_3613591_8 Belongs to the D-alanine--D-alanine ligase family K01921 - 6.3.2.4 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006189 312.0
DYD1_k127_3613591_9 Essential cell division protein. May link together the upstream cell division proteins, which are predominantly cytoplasmic, with the downstream cell division proteins, which are predominantly periplasmic. May control correct divisome assembly K03589 - - 0.000000000000000000000000000000000000000000001818 179.0
DYD1_k127_366512_0 TonB dependent receptor K02014 - - 3.862e-246 785.0
DYD1_k127_366512_1 involved in the beta-oxidation of n-alkanoic and n-phenylalkanoic acids K01897 - 6.2.1.3 0.000000000000000000000000000000000005289 143.0
DYD1_k127_366512_2 Acetyltransferase (GNAT) domain K03817 - - 0.0000000000000000000000000000000001204 141.0
DYD1_k127_366512_3 YjbR - - - 0.00000000000000000000000001158 119.0
DYD1_k127_366512_4 Thioesterase superfamily - - - 0.0000000000000000000000004866 105.0
DYD1_k127_366512_5 YjbR - - - 0.0000000000000862 81.0
DYD1_k127_3692309_0 Bacterial DNA polymerase III alpha subunit K14162 - 2.7.7.7 0.0 1164.0
DYD1_k127_3692309_1 Catalyzes the synthesis of GMP from XMP K01951 - 6.3.5.2 2.074e-254 793.0
DYD1_k127_3692309_10 Part of the outer membrane protein assembly complex, which is involved in assembly and insertion of beta-barrel proteins into the outer membrane K07277 - - 0.00000000000000000002004 93.0
DYD1_k127_3692309_11 protein conserved in bacteria K09914 - - 0.000000000000006592 84.0
DYD1_k127_3692309_2 Catalyzes the conversion of inosine 5'-phosphate (IMP) to xanthosine 5'-phosphate (XMP), the first committed and rate- limiting step in the de novo synthesis of guanine nucleotides, and therefore plays an important role in the regulation of cell growth K00088 - 1.1.1.205 5.538e-197 625.0
DYD1_k127_3692309_3 Saccharopine dehydrogenase NADP binding domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002942 394.0
DYD1_k127_3692309_4 Bidirectionally degrades single-stranded DNA into large acid-insoluble oligonucleotides, which are then degraded further into small acid-soluble oligonucleotides K03601 - 3.1.11.6 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002878 380.0
DYD1_k127_3692309_5 Belongs to the short-chain dehydrogenases reductases (SDR) family - - - 0.000000000000000000000000000000000000000000000000000000000000000004901 237.0
DYD1_k127_3692309_6 Catalyzes the deamination of adenosine to inosine at the wobble position 34 of tRNA(Arg2) K11991 - 3.5.4.33 0.00000000000000000000000000000000000000000000000000000000003135 208.0
DYD1_k127_3692309_7 Protein of unknown function (DUF502) - - - 0.000000000000000000000000000000000000000000000000000001284 198.0
DYD1_k127_3692309_8 Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family K03296 - - 0.0000000000000000000000000000000000000003864 151.0
DYD1_k127_3692309_9 DNA-binding transcription factor activity - - - 0.00000000000000000000000005211 111.0
DYD1_k127_3798046_0 Catalyzes the conversion of urocanate to 4-imidazolone- 5-propionate K01712 - 4.2.1.49 3.148e-296 915.0
DYD1_k127_3798046_1 GTP-binding protein TypA K06207 - - 1.156e-280 879.0
DYD1_k127_3798046_10 Catalyzes the thermodynamically favored C-C bond cleavage of (2R,3S)-2-methylisocitrate to yield pyruvate and succinate K03417 - 4.1.3.30 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000246 424.0
DYD1_k127_3798046_11 Peptidase, M61 - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002468 430.0
DYD1_k127_3798046_12 Binds the lower part of the 30S subunit head. Binds mRNA in the 70S ribosome, positioning it for translation K02982 GO:0002181,GO:0003674,GO:0003735,GO:0005198,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0006412,GO:0006518,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0015935,GO:0019538,GO:0022626,GO:0022627,GO:0032991,GO:0034641,GO:0034645,GO:0043043,GO:0043170,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:0071704,GO:1901564,GO:1901566,GO:1901576,GO:1990904 - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002358 356.0
DYD1_k127_3798046_13 One of the primary rRNA binding proteins, it binds directly near the 3'-end of the 23S rRNA, where it nucleates assembly of the 50S subunit K02906 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001907 322.0
DYD1_k127_3798046_14 One of the primary rRNA binding proteins, it binds directly to 16S rRNA where it nucleates assembly of the body of the 30S subunit K02986 GO:0003674,GO:0003676,GO:0003723,GO:0003735,GO:0005198,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005840,GO:0006417,GO:0006450,GO:0008150,GO:0009889,GO:0009891,GO:0009893,GO:0010468,GO:0010556,GO:0010557,GO:0010604,GO:0010608,GO:0010628,GO:0015935,GO:0019222,GO:0019843,GO:0031323,GO:0031325,GO:0031326,GO:0031328,GO:0032268,GO:0032270,GO:0032991,GO:0034248,GO:0034250,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044446,GO:0044464,GO:0045727,GO:0045903,GO:0048518,GO:0048522,GO:0050789,GO:0050794,GO:0051171,GO:0051173,GO:0051246,GO:0051247,GO:0060255,GO:0065007,GO:0065008,GO:0080090,GO:0097159,GO:1901363,GO:1990904,GO:2000112 - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003913 300.0
DYD1_k127_3798046_15 This is 1 of the proteins that binds and probably mediates the attachment of the 5S RNA into the large ribosomal subunit, where it forms part of the central protuberance. In the 70S ribosome it contacts protein S13 of the 30S subunit (bridge B1b), connecting the 2 subunits K02931 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000005757 293.0
DYD1_k127_3798046_16 Catalyzes the oxidation of erythronate-4-phosphate to 3- hydroxy-2-oxo-4-phosphonooxybutanoate K03473 GO:0000166,GO:0003674,GO:0003824,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006081,GO:0006725,GO:0006732,GO:0006766,GO:0006767,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0008614,GO:0008615,GO:0009058,GO:0009108,GO:0009110,GO:0009987,GO:0016491,GO:0016614,GO:0016616,GO:0017144,GO:0018130,GO:0019438,GO:0019637,GO:0033711,GO:0034641,GO:0036001,GO:0036094,GO:0042364,GO:0042816,GO:0042819,GO:0042822,GO:0042823,GO:0044237,GO:0044249,GO:0044271,GO:0044281,GO:0044283,GO:0044424,GO:0044444,GO:0044464,GO:0046184,GO:0046483,GO:0048037,GO:0050662,GO:0051186,GO:0051188,GO:0051287,GO:0055114,GO:0071704,GO:0072524,GO:0072525,GO:0090407,GO:0097159,GO:1901265,GO:1901360,GO:1901362,GO:1901363,GO:1901564,GO:1901566,GO:1901576,GO:1901615,GO:1901617 1.1.1.290 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000001482 289.0
DYD1_k127_3798046_17 radical SAM domain protein - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000003391 282.0
DYD1_k127_3798046_18 Located at the back of the 30S subunit body where it stabilizes the conformation of the head with respect to the body K02988 GO:0003674,GO:0003735,GO:0005198,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0006412,GO:0006518,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0015935,GO:0019538,GO:0022626,GO:0022627,GO:0032991,GO:0034641,GO:0034645,GO:0043043,GO:0043170,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:0071704,GO:1901564,GO:1901566,GO:1901576,GO:1990904 - 0.00000000000000000000000000000000000000000000000000000000000000000000000003087 252.0
DYD1_k127_3798046_19 Forms part of the polypeptide exit tunnel K02926 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000004035 251.0
DYD1_k127_3798046_2 gamma-glutamyltransferase K00681 - 2.3.2.2,3.4.19.13 7.138e-272 848.0
DYD1_k127_3798046_20 Ribosomal protein S11 K02948 GO:0000028,GO:0000462,GO:0003674,GO:0003676,GO:0003723,GO:0003729,GO:0003735,GO:0005198,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0006139,GO:0006364,GO:0006396,GO:0006412,GO:0006518,GO:0006725,GO:0006807,GO:0006996,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0015935,GO:0016043,GO:0016070,GO:0016072,GO:0019538,GO:0019843,GO:0022607,GO:0022613,GO:0022618,GO:0022626,GO:0022627,GO:0030490,GO:0032991,GO:0034470,GO:0034622,GO:0034641,GO:0034645,GO:0034660,GO:0042254,GO:0042255,GO:0042274,GO:0043043,GO:0043170,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043603,GO:0043604,GO:0043933,GO:0044085,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:0046483,GO:0048027,GO:0065003,GO:0070181,GO:0070925,GO:0071704,GO:0071826,GO:0071840,GO:0090304,GO:0097159,GO:1901360,GO:1901363,GO:1901564,GO:1901566,GO:1901576,GO:1990904 - 0.00000000000000000000000000000000000000000000000000000000000000000002256 233.0
DYD1_k127_3798046_21 This protein binds to the 23S rRNA, and is important in its secondary structure. It is located near the subunit interface in the base of the L7 L12 stalk, and near the tRNA binding site of the peptidyltransferase center K02933 GO:0002181,GO:0003674,GO:0003676,GO:0003723,GO:0003735,GO:0005198,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0006412,GO:0006518,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0015934,GO:0019538,GO:0022625,GO:0022626,GO:0032991,GO:0034641,GO:0034645,GO:0043043,GO:0043170,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:0071704,GO:0097159,GO:1901363,GO:1901564,GO:1901566,GO:1901576,GO:1990904 - 0.0000000000000000000000000000000000000000000000000000000000000000001112 234.0
DYD1_k127_3798046_22 Binds 23S rRNA and is also seen to make contacts with the A and possibly P site tRNAs K02878 GO:0000027,GO:0000049,GO:0003674,GO:0003676,GO:0003723,GO:0003735,GO:0005198,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0006412,GO:0006518,GO:0006807,GO:0006996,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0015934,GO:0016043,GO:0019538,GO:0019843,GO:0022607,GO:0022613,GO:0022618,GO:0022625,GO:0022626,GO:0032991,GO:0034622,GO:0034641,GO:0034645,GO:0042254,GO:0042255,GO:0042273,GO:0043043,GO:0043170,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043603,GO:0043604,GO:0043933,GO:0044085,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:0065003,GO:0070925,GO:0071704,GO:0071826,GO:0071840,GO:0097159,GO:1901363,GO:1901564,GO:1901566,GO:1901576,GO:1990904 - 0.0000000000000000000000000000000000000000000000000000000000000000006068 230.0
DYD1_k127_3798046_23 Binds to 23S rRNA. Forms part of two intersubunit bridges in the 70S ribosome K02874 GO:0003674,GO:0003676,GO:0003723,GO:0003735,GO:0005198,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0006412,GO:0006518,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0015934,GO:0019538,GO:0019843,GO:0022625,GO:0022626,GO:0032991,GO:0034641,GO:0034645,GO:0043043,GO:0043170,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:0070180,GO:0071704,GO:0097159,GO:1901363,GO:1901564,GO:1901566,GO:1901576,GO:1990904 - 0.0000000000000000000000000000000000000000000000000000000000002094 213.0
DYD1_k127_3798046_24 COG0346 Lactoylglutathione lyase and related lyases - - - 0.0000000000000000000000000000000000000000000000000000000005567 206.0
DYD1_k127_3798046_25 N-(5'phosphoribosyl)anthranilate (PRA) isomerase K01817 - 5.3.1.24 0.000000000000000000000000000000000000000000000000000000001286 207.0
DYD1_k127_3798046_26 Ribosomal protein L17 K02879 - - 0.00000000000000000000000000000000000000000000000000000006311 198.0
DYD1_k127_3798046_27 Located at the top of the head of the 30S subunit, it contacts several helices of the 16S rRNA. In the 70S ribosome it contacts the 23S rRNA (bridge B1a) and protein L5 of the 50S subunit (bridge B1b), connecting the 2 subunits K02952 - - 0.0000000000000000000000000000000000000000000000000000008734 193.0
DYD1_k127_3798046_28 Involved in the binding of tRNA to the ribosomes K02946 - - 0.0000000000000000000000000000000000000000000000000001063 188.0
DYD1_k127_3798046_29 binds to the 23S rRNA K02876 - - 0.00000000000000000000000000000000000000000000000001623 183.0
DYD1_k127_3798046_3 Histidine ammonia-lyase K01745 - 4.3.1.3 3.069e-215 680.0
DYD1_k127_3798046_30 Required for disulfide bond formation in some periplasmic proteins. Acts by oxidizing the DsbA protein K03611 - - 0.00000000000000000000000000000000000000000000001298 176.0
DYD1_k127_3798046_31 One of the primary rRNA binding proteins, it binds directly to 16S rRNA central domain where it helps coordinate assembly of the platform of the 30S subunit K02994 - - 0.00000000000000000000000000000000000000000000002109 173.0
DYD1_k127_3798046_32 Protein S19 forms a complex with S13 that binds strongly to the 16S ribosomal RNA K02965 - - 0.00000000000000000000000000000000000000000006687 161.0
DYD1_k127_3798046_33 This is one of the proteins that binds and probably mediates the attachment of the 5S RNA into the large ribosomal subunit, where it forms part of the central protuberance K02881 GO:0003674,GO:0003676,GO:0003723,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0008097,GO:0015934,GO:0019843,GO:0022625,GO:0022626,GO:0032991,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:0097159,GO:1901363,GO:1990904 - 0.000000000000000000000000000000000000000001648 158.0
DYD1_k127_3798046_34 The globular domain of the protein is located near the polypeptide exit tunnel on the outside of the subunit, while an extended beta-hairpin is found that lines the wall of the exit tunnel in the center of the 70S ribosome K02890 - - 0.000000000000000000000000000000000000000105 154.0
DYD1_k127_3798046_35 Binds 16S rRNA, required for the assembly of 30S particles and may also be responsible for determining the conformation of the 16S rRNA at the A site K02954 - - 0.0000000000000000000000000000000000000001937 151.0
DYD1_k127_3798046_36 One of the proteins that surrounds the polypeptide exit tunnel on the outside of the subunit K02895 - - 0.0000000000000000000000000000000000000004868 151.0
DYD1_k127_3798046_37 One of the primary rRNA binding proteins, it binds specifically to the 5'-end of 16S ribosomal RNA K02961 GO:0003674,GO:0003735,GO:0005198,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0006412,GO:0006518,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0015935,GO:0019538,GO:0022626,GO:0022627,GO:0032991,GO:0034641,GO:0034645,GO:0043043,GO:0043170,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:0071704,GO:1901564,GO:1901566,GO:1901576,GO:1990904 - 0.0000000000000000000000000000000000716 134.0
DYD1_k127_3798046_38 One of the early assembly proteins it binds 23S rRNA. One of the proteins that surrounds the polypeptide exit tunnel on the outside of the ribosome. Forms the main docking site for trigger factor binding to the ribosome K02892 GO:0000027,GO:0003674,GO:0003676,GO:0003723,GO:0003735,GO:0005198,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0006412,GO:0006518,GO:0006807,GO:0006996,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0015934,GO:0016043,GO:0019538,GO:0022607,GO:0022613,GO:0022618,GO:0022625,GO:0022626,GO:0032991,GO:0034622,GO:0034641,GO:0034645,GO:0042254,GO:0042255,GO:0042273,GO:0043043,GO:0043170,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043603,GO:0043604,GO:0043933,GO:0044085,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:0065003,GO:0070925,GO:0071704,GO:0071826,GO:0071840,GO:0097159,GO:1901363,GO:1901564,GO:1901566,GO:1901576,GO:1990904 - 0.00000000000000000000000000002019 128.0
DYD1_k127_3798046_39 Ribosomal protein L30 K02907 GO:0000027,GO:0003674,GO:0003735,GO:0005198,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0006412,GO:0006518,GO:0006807,GO:0006996,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0015934,GO:0016043,GO:0019538,GO:0022607,GO:0022613,GO:0022618,GO:0022625,GO:0022626,GO:0032991,GO:0034622,GO:0034641,GO:0034645,GO:0042254,GO:0042255,GO:0042273,GO:0043043,GO:0043170,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043603,GO:0043604,GO:0043933,GO:0044085,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:0065003,GO:0070925,GO:0071704,GO:0071826,GO:0071840,GO:1901564,GO:1901566,GO:1901576,GO:1990904 - 0.00000000000000000001877 91.0
DYD1_k127_3798046_4 phospho-2-dehydro-3-deoxyheptonate aldolase K01626 - 2.5.1.54 9.311e-211 664.0
DYD1_k127_3798046_40 This protein promotes the GTP-dependent binding of aminoacyl-tRNA to the A-site of ribosomes during protein biosynthesis K02358 - - 0.0000000000000001084 79.0
DYD1_k127_3798046_41 Belongs to the universal ribosomal protein uL29 family K02904 - - 0.0000000000003096 76.0
DYD1_k127_3798046_42 Belongs to the bacterial ribosomal protein bL36 family K02919 - - 0.000000000003941 66.0
DYD1_k127_3798046_43 Glutathione-dependent formaldehyde-activating enzyme - - - 0.0001422 45.0
DYD1_k127_3798046_5 The central subunit of the protein translocation channel SecYEG. Consists of two halves formed by TMs 1-5 and 6-10. These two domains form a lateral gate at the front which open onto the bilayer between TMs 2 and 7, and are clamped together by SecE at the back. The channel is closed by both a pore ring composed of hydrophobic SecY resides and a short helix (helix 2A) on the extracellular side of the membrane which forms a plug. The plug probably moves laterally to allow the channel to open. The ring and the pore may move independently K03076 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001137 567.0
DYD1_k127_3798046_6 Catalyzes the reversible oxidation of malate to oxaloacetate K00024 GO:0003674,GO:0003824,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006082,GO:0006091,GO:0006099,GO:0006101,GO:0006107,GO:0006108,GO:0006139,GO:0006725,GO:0006732,GO:0006733,GO:0006734,GO:0006753,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0009060,GO:0009117,GO:0009987,GO:0015980,GO:0016491,GO:0016614,GO:0016615,GO:0016616,GO:0016999,GO:0017144,GO:0019362,GO:0019637,GO:0019674,GO:0019752,GO:0030060,GO:0034641,GO:0043436,GO:0043648,GO:0044237,GO:0044238,GO:0044281,GO:0044424,GO:0044464,GO:0045333,GO:0046483,GO:0046496,GO:0051186,GO:0055086,GO:0055114,GO:0071704,GO:0072350,GO:0072524,GO:1901360,GO:1901564 1.1.1.37 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001548 477.0
DYD1_k127_3798046_7 One of the primary rRNA binding proteins. Required for association of the 30S and 50S subunits to form the 70S ribosome, for tRNA binding and peptide bond formation. It has been suggested to have peptidyltransferase activity K02886 GO:0000027,GO:0002181,GO:0003674,GO:0003676,GO:0003723,GO:0003735,GO:0005198,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0006412,GO:0006518,GO:0006807,GO:0006996,GO:0008150,GO:0008152,GO:0008270,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0015934,GO:0016043,GO:0019538,GO:0022607,GO:0022613,GO:0022618,GO:0022625,GO:0022626,GO:0032991,GO:0034622,GO:0034641,GO:0034645,GO:0042254,GO:0042255,GO:0042273,GO:0043043,GO:0043167,GO:0043169,GO:0043170,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043603,GO:0043604,GO:0043933,GO:0044085,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:0046872,GO:0046914,GO:0065003,GO:0070925,GO:0071704,GO:0071826,GO:0071840,GO:0097159,GO:1901363,GO:1901564,GO:1901566,GO:1901576,GO:1990904 - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001413 455.0
DYD1_k127_3798046_8 DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates K03040 GO:0003674,GO:0003824,GO:0003899,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006139,GO:0006351,GO:0006354,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0008270,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0016070,GO:0016740,GO:0016772,GO:0016779,GO:0018130,GO:0019438,GO:0032774,GO:0034062,GO:0034641,GO:0034645,GO:0034654,GO:0043167,GO:0043169,GO:0043170,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044271,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0046872,GO:0046914,GO:0071704,GO:0090304,GO:0097659,GO:0097747,GO:0140098,GO:1901360,GO:1901362,GO:1901576 2.7.7.6 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002791 458.0
DYD1_k127_3798046_9 Belongs to the metallo-dependent hydrolases superfamily. HutI family K01468 - 3.5.2.7 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007962 441.0
DYD1_k127_3798583_0 DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates K03043 GO:0000428,GO:0005575,GO:0005622,GO:0005623,GO:0030880,GO:0032991,GO:0044424,GO:0044464,GO:0061695,GO:1902494,GO:1990234 2.7.7.6 0.0 2108.0
DYD1_k127_3798583_1 DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates K03046 - 2.7.7.6 0.0 2092.0
DYD1_k127_3798583_10 Essential subunit of the Sec protein translocation channel SecYEG. Clamps together the 2 halves of SecY. May contact the channel plug during translocation K03073 - - 0.0000000000000000000001864 104.0
DYD1_k127_3798583_11 This protein promotes the GTP-dependent binding of aminoacyl-tRNA to the A-site of ribosomes during protein biosynthesis K02358 - - 0.0000000000000000000004673 96.0
DYD1_k127_3798583_12 This protein promotes the GTP-dependent binding of aminoacyl-tRNA to the A-site of ribosomes during protein biosynthesis K02358 - - 0.0000000000000001084 79.0
DYD1_k127_3798583_2 Catalyzes the GTP-dependent ribosomal translocation step during translation elongation. During this step, the ribosome changes from the pre-translocational (PRE) to the post- translocational (POST) state as the newly formed A-site-bound peptidyl-tRNA and P-site-bound deacylated tRNA move to the P and E sites, respectively. Catalyzes the coordinated movement of the two tRNA molecules, the mRNA and conformational changes in the ribosome K02355 - - 0.0 1130.0
DYD1_k127_3798583_3 Binds directly to 23S rRNA. The L1 stalk is quite mobile in the ribosome, and is involved in E site tRNA release K02863 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000129 337.0
DYD1_k127_3798583_4 Participates in transcription elongation, termination and antitermination K02601 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004046 313.0
DYD1_k127_3798583_5 Forms part of the ribosomal stalk which helps the ribosome interact with GTP-bound translation factors K02867 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000003094 254.0
DYD1_k127_3798583_6 Forms part of the ribosomal stalk, playing a central role in the interaction of the ribosome with GTP-bound translation factors K02864 - - 0.00000000000000000000000000000000000000000000000000000000000000000001399 236.0
DYD1_k127_3798583_7 Interacts with and stabilizes bases of the 16S rRNA that are involved in tRNA selection in the A site and with the mRNA backbone. Located at the interface of the 30S and 50S subunits, it traverses the body of the 30S subunit contacting proteins on the other side and probably holding the rRNA structure together. The combined cluster of proteins S8, S12 and S17 appears to hold together the shoulder and platform of the 30S subunit K02950 GO:0000372,GO:0000375,GO:0000376,GO:0003674,GO:0003676,GO:0003723,GO:0003735,GO:0005198,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0006139,GO:0006396,GO:0006412,GO:0006518,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0008380,GO:0009058,GO:0009059,GO:0009893,GO:0009987,GO:0010467,GO:0010468,GO:0010604,GO:0010628,GO:0015935,GO:0016070,GO:0019219,GO:0019222,GO:0019538,GO:0019843,GO:0022626,GO:0022627,GO:0031323,GO:0031325,GO:0032991,GO:0033120,GO:0034336,GO:0034337,GO:0034641,GO:0034645,GO:0043043,GO:0043170,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043484,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:0045935,GO:0046483,GO:0048518,GO:0048522,GO:0050789,GO:0050794,GO:0051171,GO:0051173,GO:0051252,GO:0051254,GO:0060255,GO:0065007,GO:0071704,GO:0080090,GO:0090304,GO:0097159,GO:1901360,GO:1901363,GO:1901564,GO:1901566,GO:1901576,GO:1990145,GO:1990904 - 0.00000000000000000000000000000000000000000000000000000000000000000009945 231.0
DYD1_k127_3798583_8 One of the primary rRNA binding proteins, it binds directly to 16S rRNA where it nucleates assembly of the head domain of the 30S subunit. Is located at the subunit interface close to the decoding center, probably blocks exit of the E-site tRNA K02992 GO:0000028,GO:0003674,GO:0003676,GO:0003723,GO:0003729,GO:0003735,GO:0005198,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0006412,GO:0006518,GO:0006807,GO:0006996,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0015935,GO:0016043,GO:0019538,GO:0019843,GO:0022607,GO:0022613,GO:0022618,GO:0022626,GO:0022627,GO:0032991,GO:0034622,GO:0034641,GO:0034645,GO:0042254,GO:0042255,GO:0042274,GO:0043043,GO:0043170,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043603,GO:0043604,GO:0043933,GO:0044085,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:0065003,GO:0070925,GO:0071704,GO:0071826,GO:0071840,GO:0097159,GO:1901363,GO:1901564,GO:1901566,GO:1901576,GO:1990904 - 0.000000000000000000000000000000000000000000000000000000000000000224 223.0
DYD1_k127_3798583_9 Forms part of the ribosomal stalk which helps the ribosome interact with GTP-bound translation factors. Is thus essential for accurate translation K02935 GO:0003674,GO:0003735,GO:0005198,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0006412,GO:0006518,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0015934,GO:0019538,GO:0022625,GO:0022626,GO:0032991,GO:0034641,GO:0034645,GO:0042802,GO:0042803,GO:0043021,GO:0043022,GO:0043043,GO:0043170,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:0044877,GO:0046983,GO:0071704,GO:1901564,GO:1901566,GO:1901576,GO:1990904 - 0.0000000000000000000000000000000000000000000000002399 178.0
DYD1_k127_3845185_0 POTRA domain TamA domain 1 K07278 - - 0.0000000000000000000000000000000000000000000000000000000000000005678 244.0
DYD1_k127_3845185_1 TamB, inner membrane protein subunit of TAM complex K09800 - - 0.00000000000000000000000000000000000002932 167.0
DYD1_k127_3855376_0 TrkA-N domain K11745 - - 9.482e-203 648.0
DYD1_k127_3855376_1 TonB dependent receptor K02014 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003272 490.0
DYD1_k127_3855376_2 Tetratricopeptide repeat - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000008911 310.0
DYD1_k127_3855376_3 - - - - 0.0000000000000000000005173 104.0
DYD1_k127_3872896_0 Tetrapolymerization of the monopyrrole PBG into the hydroxymethylbilane pre-uroporphyrinogen in several discrete steps K01749 GO:0003674,GO:0003824,GO:0004418,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006464,GO:0006725,GO:0006778,GO:0006779,GO:0006782,GO:0006783,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009987,GO:0016740,GO:0016765,GO:0018065,GO:0018130,GO:0018160,GO:0018193,GO:0018198,GO:0019438,GO:0019538,GO:0033013,GO:0033014,GO:0034641,GO:0036211,GO:0042168,GO:0042440,GO:0043170,GO:0043412,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044424,GO:0044444,GO:0044464,GO:0046148,GO:0046483,GO:0046501,GO:0051186,GO:0051188,GO:0071704,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576 2.5.1.61 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001436 333.0
DYD1_k127_3872896_1 Catalyzes the stereoinversion of LL-2,6- diaminoheptanedioate (L,L-DAP) to meso-diaminoheptanedioate (meso- DAP), a precursor of L-lysine and an essential component of the bacterial peptidoglycan K01778 GO:0003674,GO:0003824,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006082,GO:0006520,GO:0006553,GO:0006807,GO:0008150,GO:0008152,GO:0008652,GO:0008837,GO:0009058,GO:0009066,GO:0009067,GO:0009085,GO:0009089,GO:0009987,GO:0016053,GO:0016853,GO:0016854,GO:0016855,GO:0019752,GO:0036361,GO:0043436,GO:0043648,GO:0044237,GO:0044238,GO:0044249,GO:0044281,GO:0044283,GO:0044424,GO:0044444,GO:0044464,GO:0046394,GO:0046451,GO:0047661,GO:0071704,GO:1901564,GO:1901566,GO:1901576,GO:1901605,GO:1901607 5.1.1.7 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000003707 282.0
DYD1_k127_3872896_2 Carboxylesterase K06999 - - 0.00000000000000000000000000000000000000000000000000000000000000000000001554 254.0
DYD1_k127_3872896_3 Histidine kinase K08082 - 2.7.13.3 0.0000000000000000000000000000000000000000000000000000000000000000002483 242.0
DYD1_k127_3872896_4 Response regulator of the LytR AlgR family K08083 - - 0.0000000000000000000000000000000000000000000000000000002077 202.0
DYD1_k127_3872896_5 protein conserved in bacteria K09921 - - 0.000000000000000000000000000000000000408 148.0
DYD1_k127_3872896_6 Uroporphyrinogen III synthase K01719 - 4.2.1.75 0.000000000000555 79.0
DYD1_k127_3892461_0 FAD linked oxidases, C-terminal domain K00104 - 1.1.3.15 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002206 473.0
DYD1_k127_3892461_1 - - - - 0.000000000000000000000000000000001883 140.0
DYD1_k127_391023_0 amine dehydrogenase activity - - - 6.525e-212 675.0
DYD1_k127_391023_1 Belongs to the argininosuccinate synthase family. Type 1 subfamily K01940 GO:0000050,GO:0000053,GO:0003674,GO:0003824,GO:0004055,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006082,GO:0006520,GO:0006525,GO:0006526,GO:0006575,GO:0006807,GO:0008150,GO:0008152,GO:0008652,GO:0009058,GO:0009064,GO:0009084,GO:0009987,GO:0016053,GO:0016874,GO:0016879,GO:0019627,GO:0019752,GO:0034641,GO:0043436,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0044283,GO:0044424,GO:0044464,GO:0046394,GO:0071704,GO:0071941,GO:0072350,GO:1901564,GO:1901566,GO:1901576,GO:1901605,GO:1901607 6.3.4.5 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000271 615.0
DYD1_k127_391023_2 Protein phosphatase 2C domain K07315 - 3.1.3.3 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001057 357.0
DYD1_k127_391023_3 Belongs to the sigma-70 factor family. ECF subfamily K03088 - - 0.00000000000000000000000000000000358 134.0
DYD1_k127_391023_4 transporter antisigma-factor antagonist STAS K04749,K06378 - - 0.000000000005037 70.0
DYD1_k127_391023_5 anti-sigma regulatory factor, serine threonine protein kinase K04757 - 2.7.11.1 0.00000000001879 70.0
DYD1_k127_391023_6 PFAM Sel1 domain protein repeat-containing protein K07126 - - 0.0002447 49.0
DYD1_k127_3914472_0 Dehydrogenase E1 component K11381 - 1.2.4.4 1.218e-298 930.0
DYD1_k127_3914472_1 TonB-dependent receptor plug K02014 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006473 526.0
DYD1_k127_3914472_2 Belongs to the low molecular weight phosphotyrosine protein phosphatase family K01104 - 3.1.3.48 0.00000000000000000000000000000000000000000000000002891 183.0
DYD1_k127_3914472_3 Fructosamine kinase - - - 0.00000000000000000000000000000002442 132.0
DYD1_k127_3962321_0 Bifunctional purine biosynthesis protein PurH K00602 - 2.1.2.3,3.5.4.10 6.766e-203 644.0
DYD1_k127_3962321_1 Belongs to the GARS family K01945 - 6.3.4.13 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003189 589.0
DYD1_k127_3962321_2 Unwinds DNA duplexes with 3' to 5' polarity with respect to the bound strand and initiates unwinding most effectively when a single-stranded region is present K03657 - 3.6.4.12 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004533 534.0
DYD1_k127_3962321_3 COG0477 Permeases of the major facilitator superfamily K08218 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005408 505.0
DYD1_k127_3962321_4 Exodeoxyribonuclease III xth K01142 - 3.1.11.2 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007331 379.0
DYD1_k127_3962321_5 Catalyzes the transfer of a ribosyl phosphate group from 5-phosphoribose 1-diphosphate to orotate, leading to the formation of orotidine monophosphate (OMP) K00762 - 2.4.2.10 0.000000000000000000000000000000000000000000000000000000000000000000000001325 252.0
DYD1_k127_3962321_6 calcium- and calmodulin-responsive adenylate cyclase activity - - - 0.0000000000000000000000000000001546 138.0
DYD1_k127_3962321_7 Protein of unknown function (DUF3426) - - - 0.000000000000000000001215 104.0
DYD1_k127_3962321_8 Activates ribosomal RNA transcription. Plays a direct role in upstream activation of rRNA promoters K03557 GO:0000018,GO:0000229,GO:0000785,GO:0000786,GO:0000787,GO:0000789,GO:0000976,GO:0000984,GO:0000985,GO:0001017,GO:0001046,GO:0001047,GO:0001067,GO:0001121,GO:0001130,GO:0001131,GO:0001140,GO:0001216,GO:0001217,GO:0003674,GO:0003676,GO:0003677,GO:0003690,GO:0003700,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005694,GO:0005737,GO:0005829,GO:0006139,GO:0006351,GO:0006355,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0008301,GO:0009058,GO:0009059,GO:0009314,GO:0009628,GO:0009889,GO:0009890,GO:0009891,GO:0009892,GO:0009893,GO:0009987,GO:0010467,GO:0010468,GO:0010556,GO:0010557,GO:0010558,GO:0010604,GO:0010605,GO:0010628,GO:0010629,GO:0016032,GO:0016070,GO:0018130,GO:0019042,GO:0019045,GO:0019046,GO:0019219,GO:0019222,GO:0019438,GO:0031323,GO:0031324,GO:0031325,GO:0031326,GO:0031327,GO:0031328,GO:0031421,GO:0032359,GO:0032774,GO:0032991,GO:0032993,GO:0034641,GO:0034645,GO:0034654,GO:0042802,GO:0042803,GO:0043170,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043565,GO:0044212,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044271,GO:0044374,GO:0044403,GO:0044419,GO:0044422,GO:0044424,GO:0044427,GO:0044444,GO:0044446,GO:0044464,GO:0044815,GO:0045892,GO:0045893,GO:0045911,GO:0045934,GO:0045935,GO:0046483,GO:0046983,GO:0048518,GO:0048519,GO:0048522,GO:0048523,GO:0050789,GO:0050794,GO:0050896,GO:0051052,GO:0051054,GO:0051171,GO:0051172,GO:0051173,GO:0051252,GO:0051253,GO:0051254,GO:0051704,GO:0060255,GO:0065007,GO:0071704,GO:0080090,GO:0090304,GO:0097159,GO:0097659,GO:0140110,GO:1901360,GO:1901362,GO:1901363,GO:1901576,GO:1902679,GO:1902680,GO:1903506,GO:1903507,GO:1903508,GO:1990837,GO:2000112,GO:2000113,GO:2001141 - 0.000000000000008187 79.0
DYD1_k127_3962321_9 Domain of unknown function (DUF4124) - - - 0.00001842 56.0
DYD1_k127_3976094_0 Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family K07787 - - 4.625e-283 882.0
DYD1_k127_3976094_1 protein conserved in bacteria - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005659 512.0
DYD1_k127_3976094_2 Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family K07798 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001269 422.0
DYD1_k127_3976094_3 COG1538 Outer membrane protein - - - 0.0000000000000000000000000000000000000000000000000000002578 210.0
DYD1_k127_4000078_0 Catalyzes the isomerization of citrate to isocitrate via cis-aconitate K01681 GO:0003674,GO:0003676,GO:0003723,GO:0003729,GO:0003730,GO:0003824,GO:0003994,GO:0005488,GO:0005506,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005975,GO:0006081,GO:0006082,GO:0006091,GO:0006097,GO:0006099,GO:0006101,GO:0006629,GO:0006631,GO:0006950,GO:0006979,GO:0008150,GO:0008152,GO:0009060,GO:0009061,GO:0009987,GO:0015980,GO:0016829,GO:0016835,GO:0016836,GO:0016999,GO:0017144,GO:0019541,GO:0019679,GO:0019752,GO:0032787,GO:0043167,GO:0043169,GO:0043436,GO:0044237,GO:0044238,GO:0044255,GO:0044262,GO:0044281,GO:0044424,GO:0044444,GO:0044464,GO:0045333,GO:0046459,GO:0046487,GO:0046872,GO:0046914,GO:0047456,GO:0048037,GO:0050896,GO:0051536,GO:0051539,GO:0051540,GO:0055114,GO:0071704,GO:0072350,GO:0097159,GO:1901363 4.2.1.3 0.0 1298.0
DYD1_k127_4000078_1 DEAD/H associated K03724 - - 6.63e-215 695.0
DYD1_k127_4000078_2 Catalyzes the 2-thiolation of uridine at the wobble position (U34) of tRNA, leading to the formation of s(2)U34 K00566 GO:0002097,GO:0002098,GO:0002143,GO:0006139,GO:0006396,GO:0006399,GO:0006400,GO:0006725,GO:0006807,GO:0008033,GO:0008150,GO:0008152,GO:0009451,GO:0009987,GO:0010467,GO:0016070,GO:0034227,GO:0034470,GO:0034641,GO:0034660,GO:0043170,GO:0043412,GO:0044237,GO:0044238,GO:0046483,GO:0071704,GO:0090304,GO:1901360 2.8.1.13 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000185 390.0
DYD1_k127_4000078_3 High frequency lysogenization protein HflD homolog K07153 - - 0.0000000000000000000000000005228 129.0
DYD1_k127_4004935_0 Glycosyl transferase K20444 - - 3.9e-322 1035.0
DYD1_k127_4004935_1 Cell wall formation. Synthesis of cross-linked peptidoglycan from the lipid intermediates. The enzyme has a penicillin-insensitive transglycosylase N-terminal domain (formation of linear glycan strands) and a penicillin-sensitive transpeptidase C-terminal domain (cross-linking of the peptide subunits) K05365 - 2.4.1.129,3.4.16.4 7.378e-217 698.0
DYD1_k127_4004935_2 Helicase K03722 - 3.6.4.12 2.034e-216 692.0
DYD1_k127_4004935_3 COG1214 Inactive homolog of metal-dependent proteases K14742 GO:0002949,GO:0003674,GO:0003824,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006139,GO:0006396,GO:0006399,GO:0006400,GO:0006508,GO:0006725,GO:0006807,GO:0008033,GO:0008150,GO:0008152,GO:0008233,GO:0008237,GO:0009451,GO:0009987,GO:0010467,GO:0016070,GO:0016787,GO:0019538,GO:0034470,GO:0034641,GO:0034660,GO:0042802,GO:0043170,GO:0043412,GO:0044237,GO:0044238,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0070011,GO:0070525,GO:0071704,GO:0090304,GO:0140096,GO:1901360,GO:1901564 - 0.00000000000000000000000000000000000000000005562 173.0
DYD1_k127_4004935_4 Tetratricopeptide repeat - - - 0.000000000000000000000686 103.0
DYD1_k127_4038108_0 Catalyzes the hydrolysis of a monocarboxylic acid amid to form a monocarboxylate and ammonia K01426 - 3.5.1.4 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001974 501.0
DYD1_k127_4038108_1 Bacterial regulatory protein, Fis family - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001395 394.0
DYD1_k127_4038108_2 PAS domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002698 316.0
DYD1_k127_4038108_3 OsmC-like protein K04063 - - 0.000000000000000000000000000000000000000000000000000003701 194.0
DYD1_k127_4038724_0 COG3119 Arylsulfatase A and related enzymes K01130 - 3.1.6.1 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001534 568.0
DYD1_k127_4038724_1 Domain of unknown function (DUF4142) - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001739 527.0
DYD1_k127_4038724_10 FCD - - - 0.000000000000000000000000000000000000000000000000000009334 197.0
DYD1_k127_4038724_11 FAD linked oxidases, C-terminal domain - - - 0.000000276 54.0
DYD1_k127_4038724_2 TonB-dependent receptor K02014 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008082 531.0
DYD1_k127_4038724_3 FMN-dependent dehydrogenase K00101 - 1.1.2.3 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001056 423.0
DYD1_k127_4038724_4 Sugar (and other) transporter K08195 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001973 372.0
DYD1_k127_4038724_5 Enoyl-CoA hydratase/isomerase K20765 - 3.7.1.18 0.00000000000000000000000000000000000000000000000000000000000000000000000000000005478 275.0
DYD1_k127_4038724_6 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily K01759 GO:0003674,GO:0003824,GO:0004462,GO:0006518,GO:0006575,GO:0006749,GO:0006790,GO:0006807,GO:0008150,GO:0008152,GO:0009987,GO:0016829,GO:0016846,GO:0034641,GO:0043603,GO:0044237,GO:0051186,GO:0071704,GO:1901564 4.4.1.5 0.0000000000000000000000000000000000000000000000000000000000000000002738 233.0
DYD1_k127_4038724_7 Catalyzes the cleavage of glutathione into 5-oxo-L- proline and a Cys-Gly dipeptide. Acts specifically on glutathione, but not on other gamma-glutamyl peptides - - - 0.000000000000000000000000000000000000000000000000000000000000000002265 231.0
DYD1_k127_4038724_8 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase - - - 0.00000000000000000000000000000000000000000000000000000000104 213.0
DYD1_k127_4038724_9 Belongs to the HpcH HpaI aldolase family K02510 - 4.1.2.52 0.00000000000000000000000000000000000000000000000000000001176 208.0
DYD1_k127_4083641_0 WD40-like Beta Propeller Repeat - - - 2.206e-310 972.0
DYD1_k127_4083641_1 Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family K00823 - 2.6.1.19 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003119 477.0
DYD1_k127_4083836_0 COG1218 3'-Phosphoadenosine 5'-phosphosulfate (PAPS) 3'-phosphatase K01082 GO:0000103,GO:0000287,GO:0003674,GO:0003824,GO:0005488,GO:0006790,GO:0006793,GO:0006796,GO:0008150,GO:0008152,GO:0008252,GO:0008441,GO:0009987,GO:0016311,GO:0016787,GO:0016788,GO:0016791,GO:0042578,GO:0043167,GO:0043169,GO:0044237,GO:0046872 3.1.3.7 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001119 308.0
DYD1_k127_4083836_1 Inositol monophosphatase K05602 - 3.1.3.15 0.00000000000000000000000000000000000000000000000000000000000000000000000000000001237 277.0
DYD1_k127_4083836_2 nadh pyrophosphatase K03426 - 3.6.1.22 0.00000000000000000000000000000000000000000000000000000000000000000000000000004297 269.0
DYD1_k127_4083836_3 Specifically methylates the N3 position of the uracil ring of uridine 1498 (m3U1498) in 16S rRNA. Acts on the fully assembled 30S ribosomal subunit K09761 - 2.1.1.193 0.00000000000000000000000000000000000000000000000000000000000001568 223.0
DYD1_k127_4083836_4 Iron-sulfur cluster insertion protein ErpA K15724 GO:0003674,GO:0005488,GO:0005506,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006790,GO:0006807,GO:0008150,GO:0008152,GO:0009987,GO:0010467,GO:0016043,GO:0016226,GO:0019538,GO:0022607,GO:0031163,GO:0043167,GO:0043169,GO:0043170,GO:0044085,GO:0044237,GO:0044238,GO:0044424,GO:0044444,GO:0044464,GO:0046872,GO:0046914,GO:0048037,GO:0051186,GO:0051536,GO:0051537,GO:0051539,GO:0051540,GO:0051604,GO:0071704,GO:0071840,GO:1901564 - 0.0000000000000000000000000000000000000000000000000002772 187.0
DYD1_k127_4083836_5 membrane K08973 - - 0.00000000000000000000000000000000000000000000000496 178.0
DYD1_k127_4083836_6 Membrane protein required for beta-lactamase induction K03807 - - 0.00000000000000000000000000000000000000000001815 173.0
DYD1_k127_4092856_0 Couples transcription and DNA repair by recognizing RNA polymerase (RNAP) stalled at DNA lesions. Mediates ATP-dependent release of RNAP and its truncated transcript from the DNA, and recruitment of nucleotide excision repair machinery to the damaged site K03723 - - 0.0 1231.0
DYD1_k127_4092856_1 Belongs to the peptidase M16 family K07263 - - 3.613e-236 754.0
DYD1_k127_4092856_2 Na H antiporter - - - 3.326e-206 664.0
DYD1_k127_4092856_3 TraB family - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004617 441.0
DYD1_k127_4092856_4 3'-to-5' exoribonuclease specific for small oligoribonucleotides K13288 GO:0000175,GO:0003674,GO:0003824,GO:0004518,GO:0004527,GO:0004532,GO:0004540,GO:0006139,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0008408,GO:0009987,GO:0016070,GO:0016787,GO:0016788,GO:0016796,GO:0016896,GO:0034641,GO:0043170,GO:0044237,GO:0044238,GO:0046483,GO:0071704,GO:0090304,GO:0090305,GO:0090501,GO:0090503,GO:0140098,GO:1901360 - 0.00000000000000000000000000000000000000000000000000000000000000000000000272 250.0
DYD1_k127_4092856_5 One of several proteins that assist in the late maturation steps of the functional core of the 30S ribosomal subunit. Helps release RbfA from mature subunits. May play a role in the assembly of ribosomal proteins into the subunit. Circularly permuted GTPase that catalyzes slow GTP hydrolysis, GTPase activity is stimulated by the 30S ribosomal subunit K06949 GO:0000166,GO:0001882,GO:0001883,GO:0003674,GO:0003824,GO:0003924,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0008150,GO:0016462,GO:0016787,GO:0016817,GO:0016818,GO:0017076,GO:0017111,GO:0019001,GO:0019003,GO:0022613,GO:0032549,GO:0032550,GO:0032553,GO:0032555,GO:0032561,GO:0036094,GO:0042254,GO:0042274,GO:0043167,GO:0043168,GO:0044085,GO:0044424,GO:0044444,GO:0044464,GO:0071840,GO:0097159,GO:0097367,GO:1901265,GO:1901363 3.1.3.100 0.00000000000000000000000000000000000000000000000000000000000000000001462 249.0
DYD1_k127_4092856_6 - - - - 0.00000000000005757 77.0
DYD1_k127_4092856_7 Peptidoglycan-binding protein, CsiV - - - 0.00003173 55.0
DYD1_k127_4097545_0 mechanosensitive ion channel K22044 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002162 396.0
DYD1_k127_4097545_1 Converts alpha-N-acetylneuranimic acid (Neu5Ac) to the beta-anomer, accelerating the equilibrium between the alpha- and beta-anomers. Probably facilitates sialidase-negative bacteria to compete sucessfully for limited amounts of extracellular Neu5Ac, which is likely taken up in the beta-anomer. In addition, the rapid removal of sialic acid from solution might be advantageous to the bacterium to damp down host responses - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000005313 312.0
DYD1_k127_4097545_2 Phosphoglucomutase phosphomannomutase alpha beta alpha domain I K01835 - 5.4.2.2 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000008349 278.0
DYD1_k127_4097545_3 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain K18143 - 2.7.13.3 0.00000000000000000000000000000000000000000000000000000000000000000004455 252.0
DYD1_k127_4097545_4 Phytanoyl-CoA dioxygenase PhyH family protein - - - 0.0000000000000000000000000000000000000000000000002601 186.0
DYD1_k127_4097545_5 COG0745 Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain - - - 0.0000000000000000000000000000000000000000000002882 170.0
DYD1_k127_4097545_6 alginic acid biosynthetic process K09483 - 4.2.1.118 0.00000000000000000000001763 118.0
DYD1_k127_4097545_7 Metallo-peptidase family M12B Reprolysin-like - - - 0.000000000000000000001468 111.0
DYD1_k127_4109625_0 Sulfotransferase family - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002946 478.0
DYD1_k127_4109625_1 Part of the ABC transporter complex ModABC involved in molybdenum import. Responsible for energy coupling to the transport system K02017 - 3.6.3.29 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001311 399.0
DYD1_k127_4109625_10 - - - - 0.0000000000000000000000000000001091 130.0
DYD1_k127_4109625_11 Domain of unknown function (DUF4440) - - - 0.000002063 55.0
DYD1_k127_4109625_12 Belongs to the DNA photolyase family K01669 - 4.1.99.3 0.0005997 43.0
DYD1_k127_4109625_2 Prolyl 4-hydroxylase alpha subunit homologues. - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001014 396.0
DYD1_k127_4109625_3 Aspartyl/Asparaginyl beta-hydroxylase K12979 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006694 368.0
DYD1_k127_4109625_4 COG0457 FOG TPR repeat - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001271 338.0
DYD1_k127_4109625_5 transport system, permease component K02018 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002169 322.0
DYD1_k127_4109625_6 COG0457 FOG TPR repeat - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000005329 278.0
DYD1_k127_4109625_7 TIGRFAM molybdenum ABC transporter, periplasmic K02020 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000739 250.0
DYD1_k127_4109625_8 Reversible hydration of carbon dioxide K01673 - 4.2.1.1 0.00000000000000000000000000000000000000000000000000000000000000003095 238.0
DYD1_k127_4109625_9 Glutathione-dependent formaldehyde-activating enzyme - - - 0.0000000000000000000000000000000000000000000005397 170.0
DYD1_k127_4121035_0 due to the large number of codons that tRNA(Leu) recognizes, the leucyl-tRNA synthetase does not recognize the anticodon loop of the tRNA, but instead recognition is dependent on a conserved discriminator base A37 and a long arm K01869 GO:0003674,GO:0003824,GO:0004812,GO:0004823,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006082,GO:0006139,GO:0006399,GO:0006412,GO:0006418,GO:0006429,GO:0006518,GO:0006520,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0016070,GO:0016874,GO:0016875,GO:0019538,GO:0019752,GO:0034641,GO:0034645,GO:0034660,GO:0043038,GO:0043039,GO:0043043,GO:0043170,GO:0043436,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044281,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0071704,GO:0090304,GO:0140098,GO:0140101,GO:1901360,GO:1901564,GO:1901566,GO:1901576 6.1.1.4 0.0 1099.0
DYD1_k127_4121035_1 Phosphate starvation protein PhoH K07175 - - 3.864e-196 623.0
DYD1_k127_4121035_10 Ferredoxins are iron-sulfur proteins that transfer electrons in a wide variety of metabolic reactions K05524 - - 0.000000000000000000000000000000000000000000000000000000000001584 209.0
DYD1_k127_4121035_11 Phosphomethylpyrimidine kinase K00941,K14153 - 2.5.1.3,2.7.1.49,2.7.4.7 0.000000000000000000000000000000000000000006324 160.0
DYD1_k127_4121035_12 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase (HPPK) K00950 - 2.7.6.3 0.00000000000000000000000000000000000001858 149.0
DYD1_k127_4121035_13 Outer membrane protein transport protein (OMPP1/FadL/TodX) K06076 - - 0.00000000000000000000004147 113.0
DYD1_k127_4121035_14 Together with LptD, is involved in the assembly of lipopolysaccharide (LPS) at the surface of the outer membrane. Required for the proper assembly of LptD. Binds LPS and may serve as the LPS recognition site at the outer membrane K03643 - - 0.0000000000000001348 86.0
DYD1_k127_4121035_15 NlpB/DapX lipoprotein K07287 - - 0.0006768 50.0
DYD1_k127_4121035_2 Phosphoglucose isomerase K01810 GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0044424,GO:0044464 5.3.1.9 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006612 419.0
DYD1_k127_4121035_3 Permease K03548 GO:0003674,GO:0005215,GO:0005575,GO:0005623,GO:0005886,GO:0005887,GO:0006810,GO:0008150,GO:0016020,GO:0016021,GO:0031224,GO:0031226,GO:0044425,GO:0044459,GO:0044464,GO:0051179,GO:0051234,GO:0055085,GO:0071944 - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002151 405.0
DYD1_k127_4121035_4 Adds poly(A) tail to the 3' end of many RNAs, which usually targets these RNAs for decay. Plays a significant role in the global control of gene expression, through influencing the rate of transcript degradation, and in the general RNA quality control K00970 - 2.7.7.19 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003622 377.0
DYD1_k127_4121035_5 Catalyzes the reversible reaction in which hydroxymethyl group from 5,10-methylenetetrahydrofolate is transferred onto alpha-ketoisovalerate to form ketopantoate K00606 - 2.1.2.11 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001022 306.0
DYD1_k127_4121035_6 Bacterial protein of unknown function (DUF853) K06915 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000008399 304.0
DYD1_k127_4121035_7 Catalyzes the condensation of (S)-aspartate-beta- semialdehyde (S)-ASA and pyruvate to 4-hydroxy- tetrahydrodipicolinate (HTPA) K01714 - 4.3.3.7 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000003854 291.0
DYD1_k127_4121035_8 Catalyzes the condensation of pantoate with beta-alanine in an ATP-dependent reaction via a pantoyl-adenylate intermediate K01918 - 6.3.2.1 0.000000000000000000000000000000000000000000000000000000000000000000000000000009233 278.0
DYD1_k127_4121035_9 Peroxiredoxin K03564 - 1.11.1.15 0.00000000000000000000000000000000000000000000000000000000000000006055 225.0
DYD1_k127_4122315_0 thiamine transport K02011 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001256 441.0
DYD1_k127_4122315_1 iron ion homeostasis K02012 GO:0005575,GO:0005623,GO:0042597,GO:0044464 - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001914 421.0
DYD1_k127_4122315_10 helix_turn_helix, Arsenical Resistance Operon Repressor - - - 0.000000000000000000000000000000001199 132.0
DYD1_k127_4122315_11 helix_turn_helix, Arsenical Resistance Operon Repressor - - - 0.000000000000000000000000000001307 123.0
DYD1_k127_4122315_12 Forms passive diffusion pores that allow small molecular weight hydrophilic materials across the outer membrane - - - 0.00000002362 63.0
DYD1_k127_4122315_2 exo-alpha-(2->6)-sialidase activity - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002231 408.0
DYD1_k127_4122315_3 UDP-N-acetylmuramoylalanyl-D-glutamate-2,6-diaminopimelate ligase activity K01928,K03802 - 6.3.2.13,6.3.2.29,6.3.2.30 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004703 332.0
DYD1_k127_4122315_4 ATPases associated with a variety of cellular activities - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000007971 324.0
DYD1_k127_4122315_5 Redoxin K03386 - 1.11.1.15 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000001623 292.0
DYD1_k127_4122315_6 PFAM carbonic anhydrase K01674 - 4.2.1.1 0.000000000000000000000000000000000000000000000000000000000000001878 228.0
DYD1_k127_4122315_7 Activator of Hsp90 ATPase homolog 1-like protein - - - 0.00000000000000000000000000000000000000000000000004145 184.0
DYD1_k127_4122315_8 Antioxidant protein with alkyl hydroperoxidase activity. Required for the reduction of the AhpC active site cysteine residues and for the regeneration of the AhpC enzyme activity K04756 - - 0.000000000000000000000000000000000000000000003922 169.0
DYD1_k127_4122315_9 glyoxalase III activity - - - 0.00000000000000000000000000000000000005028 154.0
DYD1_k127_4124654_0 RTCB protein K14415 - 6.5.1.3 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004467 551.0
DYD1_k127_4124654_1 ATPase, P-type (transporting), HAD superfamily, subfamily IC K01537 - 3.6.3.8 0.00000000000000000000000000000000000000000000000000000000000000000000000000007905 264.0
DYD1_k127_4124654_2 Archease protein family (MTH1598/TM1083) - - - 0.00000000000000000000000000000000000000000001911 165.0
DYD1_k127_4124654_3 - - - - 0.000000001364 62.0
DYD1_k127_4158883_0 Involved in the restart of stalled replication forks. Recognizes and binds the arrested nascent DNA chain at stalled replication forks. It can open the DNA duplex, via its helicase activity, and promote assembly of the primosome and loading of the major replicative helicase DnaB onto DNA K04066 - - 7.562e-207 665.0
DYD1_k127_4158883_1 Belongs to the peptidase S41A family K03797 - 3.4.21.102 1.103e-199 645.0
DYD1_k127_4158883_10 von willebrand factor, type A K07114 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002395 359.0
DYD1_k127_4158883_11 Lytic murein transglycosylase K08305 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001482 317.0
DYD1_k127_4158883_12 Catalyzes the transfer of endogenously produced octanoic acid from octanoyl-acyl-carrier-protein onto the lipoyl domains of lipoate-dependent enzymes. Lipoyl-ACP can also act as a substrate although octanoyl-ACP is likely to be the physiological substrate K03801 GO:0003674,GO:0003824,GO:0006082,GO:0006464,GO:0006629,GO:0006631,GO:0006633,GO:0006732,GO:0006790,GO:0006807,GO:0008150,GO:0008152,GO:0008610,GO:0009058,GO:0009106,GO:0009107,GO:0009108,GO:0009249,GO:0009892,GO:0009987,GO:0010467,GO:0010468,GO:0010605,GO:0010629,GO:0016053,GO:0016415,GO:0016740,GO:0016746,GO:0016747,GO:0016772,GO:0016779,GO:0016874,GO:0016879,GO:0016979,GO:0018065,GO:0018130,GO:0018193,GO:0018205,GO:0019222,GO:0019538,GO:0019752,GO:0032787,GO:0033819,GO:0036211,GO:0043170,GO:0043412,GO:0043436,GO:0044237,GO:0044238,GO:0044249,GO:0044255,GO:0044260,GO:0044267,GO:0044272,GO:0044281,GO:0044283,GO:0046394,GO:0046483,GO:0048519,GO:0050789,GO:0051186,GO:0051188,GO:0051604,GO:0060255,GO:0065007,GO:0071704,GO:0072330,GO:0140096,GO:1901360,GO:1901362,GO:1901564,GO:1901576 2.3.1.181 0.00000000000000000000000000000000000000000000000000000000000000000000000000001319 265.0
DYD1_k127_4158883_13 Protein of unknown function DUF58 - - - 0.000000000000000000000000000000000000000000000000000000000000000000001059 248.0
DYD1_k127_4158883_14 Involved in formation and maintenance of cell shape K03570 - - 0.00000000000000000000000000000000000000000000000000000000000000000001702 244.0
DYD1_k127_4158883_15 Lytic transglycosylase with a strong preference for naked glycan strands that lack stem peptides K03642 - - 0.00000000000000000000000000000000000000000000000000000000000006677 227.0
DYD1_k127_4158883_16 Channel that opens in response to stretch forces in the membrane lipid bilayer. May participate in the regulation of osmotic pressure changes within the cell K03282 - - 0.0000000000000000000000000000000000000000000000000000000008327 203.0
DYD1_k127_4158883_17 Involved in formation of the rod shape of the cell. May also contribute to regulation of formation of penicillin-binding proteins K03571 - - 0.0000000000000000000000000000000000001414 151.0
DYD1_k127_4158883_18 Domain of unknown function (DUF4381) - - - 0.00000000000000000000001272 108.0
DYD1_k127_4158883_19 Belongs to the UPF0250 family K09158 - - 0.00000000000000000002921 94.0
DYD1_k127_4158883_2 Catalyzes cross-linking of the peptidoglycan cell wall K05515 - 3.4.16.4 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007374 609.0
DYD1_k127_4158883_20 Oxygen tolerance - - - 0.0000000008055 66.0
DYD1_k127_4158883_3 Rod shape-determining protein K03569 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005984 577.0
DYD1_k127_4158883_4 Catalyzes the radical-mediated insertion of two sulfur atoms into the C-6 and C-8 positions of the octanoyl moiety bound to the lipoyl domains of lipoate-dependent enzymes, thereby converting the octanoylated domains into lipoylated derivatives K03644 GO:0003674,GO:0003824,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006082,GO:0006464,GO:0006629,GO:0006631,GO:0006633,GO:0006732,GO:0006790,GO:0006807,GO:0008150,GO:0008152,GO:0008610,GO:0009058,GO:0009106,GO:0009107,GO:0009108,GO:0009249,GO:0009987,GO:0010467,GO:0016053,GO:0016740,GO:0016782,GO:0016783,GO:0016992,GO:0018065,GO:0018130,GO:0018193,GO:0018205,GO:0019538,GO:0019752,GO:0032787,GO:0036211,GO:0043170,GO:0043412,GO:0043436,GO:0044237,GO:0044238,GO:0044249,GO:0044255,GO:0044260,GO:0044267,GO:0044272,GO:0044281,GO:0044283,GO:0044424,GO:0044464,GO:0046394,GO:0046483,GO:0051186,GO:0051188,GO:0051604,GO:0070283,GO:0071704,GO:0072330,GO:1901360,GO:1901362,GO:1901564,GO:1901576 2.8.1.8 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005253 519.0
DYD1_k127_4158883_5 ATPase (AAA K03924 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005976 460.0
DYD1_k127_4158883_6 Peptidoglycan polymerase that is essential for cell wall elongation K05837 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003148 437.0
DYD1_k127_4158883_7 Belongs to the peptidase S11 family K07258 - 3.4.16.4 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007204 428.0
DYD1_k127_4158883_8 pfkB family carbohydrate kinase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003423 404.0
DYD1_k127_4158883_9 von Willebrand factor, type A K07114 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003755 359.0
DYD1_k127_4201918_0 Nitrite reductase K15864 - 1.7.2.1,1.7.99.1 6.449e-306 951.0
DYD1_k127_4201918_1 Subtilase family - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000368 429.0
DYD1_k127_4201918_2 Aldehyde dehydrogenase family K00128 - 1.2.1.3 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006766 364.0
DYD1_k127_4201918_3 Alginate export - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003827 318.0
DYD1_k127_4201918_4 outer membrane autotransporter K12287,K12686 - - 0.000000000000004697 90.0
DYD1_k127_4201918_5 TonB dependent receptor K16087,K16089 - - 0.0000000003744 61.0
DYD1_k127_4206829_0 Catalyzes the ferrous insertion into protoporphyrin IX K01772 GO:0003674,GO:0003824,GO:0004325,GO:0006725,GO:0006778,GO:0006779,GO:0006783,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009987,GO:0016829,GO:0018130,GO:0019438,GO:0033013,GO:0033014,GO:0034641,GO:0042168,GO:0042440,GO:0044237,GO:0044249,GO:0044271,GO:0046148,GO:0046483,GO:0051186,GO:0051188,GO:0071704,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576 4.99.1.1,4.99.1.9 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006972 349.0
DYD1_k127_4206829_1 Part of the twin-arginine translocation (Tat) system that transports large folded proteins containing a characteristic twin-arginine motif in their signal peptide across membranes. Together with TatB, TatC is part of a receptor directly interacting with Tat signal peptides K03118 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002119 311.0
DYD1_k127_4206829_2 protein secretion K03116 - - 0.000000000000001849 81.0
DYD1_k127_4206829_3 Part of the twin-arginine translocation (Tat) system that transports large folded proteins containing a characteristic twin-arginine motif in their signal peptide across membranes. Together with TatC, TatB is part of a receptor directly interacting with Tat signal peptides. TatB may form an oligomeric binding site that transiently accommodates folded Tat precursor proteins before their translocation K03117 - - 0.00000000000001725 77.0
DYD1_k127_425089_0 X-Pro dipeptidyl-peptidase (S15 family) - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004611 389.0
DYD1_k127_425089_1 deoxyhypusine monooxygenase activity - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001322 342.0
DYD1_k127_425089_2 Reversibly catalyzes the transfer of the carbamoyl group from carbamoyl phosphate (CP) to the N(epsilon) atom of ornithine (ORN) to produce L-citrulline K00611 - 2.1.3.3 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000001588 301.0
DYD1_k127_425089_3 SEC-C Motif Domain Protein - - - 0.000000000000000000000000000000000006855 145.0
DYD1_k127_425089_4 General secretion pathway protein - - - 0.00000000000003597 81.0
DYD1_k127_4256593_0 Catalyzes the attachment of L-aspartate to tRNA(Asp) in a two-step reaction L-aspartate is first activated by ATP to form Asp-AMP and then transferred to the acceptor end of tRNA(Asp) K01876 - 6.1.1.12 3.745e-230 726.0
DYD1_k127_4256593_1 The RuvA-RuvB complex in the presence of ATP renatures cruciform structure in supercoiled DNA with palindromic sequence, indicating that it may promote strand exchange reactions in homologous recombination. RuvAB is a helicase that mediates the Holliday junction migration by localized denaturation and reannealing K03551 - 3.6.4.12 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003287 499.0
DYD1_k127_4256593_10 Tol-Pal system-associated acyl-CoA thioesterase K07107 - - 0.000000000000000000000000000000002046 136.0
DYD1_k127_4256593_11 Regulatory protein, FmdB family - - - 0.0000000000000000000000000003248 117.0
DYD1_k127_4256593_12 Membrane protein TolA K03646 - - 0.00000000000000000000199 106.0
DYD1_k127_4256593_2 transcriptional regulatory protein - GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0008150,GO:0009314,GO:0009628,GO:0010212,GO:0044424,GO:0044444,GO:0044464,GO:0050896 - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000456 335.0
DYD1_k127_4256593_3 TolQ protein K03562 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000001791 268.0
DYD1_k127_4256593_4 Rard protein K05786 GO:0005575,GO:0005623,GO:0005886,GO:0016020,GO:0016021,GO:0031224,GO:0044425,GO:0044464,GO:0071944 - 0.0000000000000000000000000000000000000000000000000000000000000000000000000001197 267.0
DYD1_k127_4256593_5 The RuvA-RuvB complex in the presence of ATP renatures cruciform structure in supercoiled DNA with palindromic sequence, indicating that it may promote strand exchange reactions in homologous recombination. RuvAB is a helicase that mediates the Holliday junction migration by localized denaturation and reannealing. RuvA stimulates, in the presence of DNA, the weak ATPase activity of RuvB K03550 - 3.6.4.12 0.00000000000000000000000000000000000000000000000000000000000009834 218.0
DYD1_k127_4256593_6 Peptidase family M49 - - - 0.00000000000000000000000000000000000000000000000000000003848 205.0
DYD1_k127_4256593_7 Nuclease that resolves Holliday junction intermediates in genetic recombination. Cleaves the cruciform structure in supercoiled DNA by nicking to strands with the same polarity at sites symmetrically opposed at the junction in the homologous arms and leaves a 5'-terminal phosphate and a 3'-terminal hydroxyl group K01159 - 3.1.22.4 0.0000000000000000000000000000000000000000000000000001828 190.0
DYD1_k127_4256593_8 acetyltransferases and hydrolases with the alpha beta hydrolase fold - - - 0.000000000000000000000000000000000000001972 154.0
DYD1_k127_4256593_9 Biopolymer transport protein ExbD TolR K03560 - - 0.0000000000000000000000000000000000007024 144.0
DYD1_k127_4271875_0 Major facilitator superfamily - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006055 464.0
DYD1_k127_4271875_1 Glycosyl transferase family 2 - - - 0.00000000000000000000000000000000000000000000000000000001718 210.0
DYD1_k127_4271875_2 Methionine biosynthesis protein MetW - - - 0.00000000000000000000000000000000004488 153.0
DYD1_k127_4271875_3 - - - - 0.00000000002303 70.0
DYD1_k127_4271875_4 Pilus assembly protein PilX - - - 0.00009981 49.0
DYD1_k127_4316982_0 Sulfatase - - - 0.00000000000000000000000000000000000000000000002421 187.0
DYD1_k127_4316982_1 Acts both as a biotin-- acetyl-CoA-carboxylase ligase and a biotin-operon repressor. In the presence of ATP, BirA activates biotin to form the BirA-biotinyl-5'-adenylate (BirA-bio- 5'-AMP or holoBirA) complex. HoloBirA can either transfer the biotinyl moiety to the biotin carboxyl carrier protein (BCCP) subunit of acetyl-CoA carboxylase, or bind to the biotin operator site and inhibit transcription of the operon K03524 GO:0000166,GO:0000976,GO:0000984,GO:0001017,GO:0001067,GO:0003674,GO:0003676,GO:0003677,GO:0003690,GO:0003824,GO:0004077,GO:0005488,GO:0005515,GO:0005524,GO:0005575,GO:0006082,GO:0006464,GO:0006732,GO:0006766,GO:0006767,GO:0006768,GO:0006790,GO:0006807,GO:0008144,GO:0008150,GO:0008152,GO:0009058,GO:0009102,GO:0009108,GO:0009110,GO:0009305,GO:0009374,GO:0009987,GO:0016053,GO:0016874,GO:0016879,GO:0017053,GO:0017076,GO:0017144,GO:0018130,GO:0018271,GO:0019538,GO:0019752,GO:0019842,GO:0030554,GO:0031406,GO:0032553,GO:0032555,GO:0032559,GO:0032787,GO:0032991,GO:0033218,GO:0033293,GO:0034641,GO:0035639,GO:0036094,GO:0036211,GO:0042364,GO:0042802,GO:0042803,GO:0043167,GO:0043168,GO:0043170,GO:0043177,GO:0043412,GO:0043436,GO:0043565,GO:0043603,GO:0043604,GO:0044212,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044272,GO:0044281,GO:0044283,GO:0046394,GO:0046483,GO:0046983,GO:0048037,GO:0050662,GO:0051186,GO:0051188,GO:0071704,GO:0072330,GO:0097159,GO:0097367,GO:0140096,GO:1901265,GO:1901360,GO:1901362,GO:1901363,GO:1901564,GO:1901566,GO:1901576,GO:1901681,GO:1990837 6.3.4.15 0.00000000000000000000000000000000000002561 154.0
DYD1_k127_4316982_2 PFAM Glycosyl transferase, group 1 K12994 - 2.4.1.349 0.000000000000000000000000000000000001929 152.0
DYD1_k127_4316982_3 Catalyzes the phosphorylation of pantothenate (Pan), the first step in CoA biosynthesis K03525 - 2.7.1.33 0.0000000000000000000000004204 116.0
DYD1_k127_4316982_4 methyltransferase activity - - - 0.0000000000000000000003367 106.0
DYD1_k127_4316982_5 Catalyzes the transfer of an acyl group from acyl- phosphate (acyl-PO(4)) to glycerol-3-phosphate (G3P) to form lysophosphatidic acid (LPA). This enzyme utilizes acyl-phosphate as fatty acyl donor, but not acyl-CoA or acyl-ACP K08591 - 2.3.1.15 0.0000000000000003413 81.0
DYD1_k127_4316982_6 Sporulation related domain - - - 0.00000001205 65.0
DYD1_k127_4372353_0 von Willebrand factor (VWF) type A domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004594 519.0
DYD1_k127_4372353_1 Secreted protein, containing von Willebrand factor (VWF) type - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002166 434.0
DYD1_k127_4372353_10 Rhodanese Homology Domain - - - 0.00000000000000000000000000000000000000000000006491 170.0
DYD1_k127_4372353_2 Pfam MotA TolQ ExbB proton channel family - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003751 398.0
DYD1_k127_4372353_3 Radical SAM - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002841 389.0
DYD1_k127_4372353_4 KR domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008311 340.0
DYD1_k127_4372353_5 Zn-dependent protease - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001103 311.0
DYD1_k127_4372353_6 - - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000005489 281.0
DYD1_k127_4372353_7 - - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000004881 264.0
DYD1_k127_4372353_8 Zn-dependent protease - - - 0.000000000000000000000000000000000000000000000000000000000000000005437 231.0
DYD1_k127_4372353_9 - - - - 0.0000000000000000000000000000000000000000000000000000000000000003552 226.0
DYD1_k127_438009_0 Adenylate cyclase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000001086 265.0
DYD1_k127_438009_1 Toxic component of a toxin-antitoxin (TA) module. An RNase K18828 - - 0.000000000000000000000000000000000000000000000000008601 183.0
DYD1_k127_438009_2 addiction module antidote protein - - - 0.000000000000000000000000000000000001927 139.0
DYD1_k127_438009_3 SpoVT AbrB K18829 - - 0.00000000000000000000000000008206 117.0
DYD1_k127_4399594_0 TIGRFAM glutaminyl-tRNA synthetase K01886 - 6.1.1.18 1.496e-267 832.0
DYD1_k127_4399594_1 Belongs to the dicarboxylate amino acid cation symporter (DAACS) (TC 2.A.23) family K03309 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001351 450.0
DYD1_k127_4399594_2 3-deoxy-D-manno-oct-2-ulosonic acid (Kdo) hydroxylase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003663 367.0
DYD1_k127_4399594_3 heptosyltransferase K12982 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002575 331.0
DYD1_k127_4399594_4 Belongs to the GST superfamily K00799 - 2.5.1.18 0.0000000000000000000000000000000000000000000000000000000000000000000002839 243.0
DYD1_k127_4399594_5 Glutathione-dependent formaldehyde-activating - - - 0.000000000000000000000000000000002286 138.0
DYD1_k127_4399594_6 LemA family K03744 - - 0.0000000000000000002959 88.0
DYD1_k127_4451109_0 COG0577 ABC-type antimicrobial peptide transport system permease component - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006195 526.0
DYD1_k127_4451109_1 Pyridoxal-dependent decarboxylase conserved domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002519 476.0
DYD1_k127_4451109_10 TIGRFAM RNA polymerase sigma factor, sigma-70 family K03088 - - 0.00000000000000000000000001623 117.0
DYD1_k127_4451109_11 - - - - 0.0000000000000000001398 103.0
DYD1_k127_4451109_12 - - - - 0.00000000000000006643 82.0
DYD1_k127_4451109_13 peptidase M19 K01273 - 3.4.13.19 0.0000000000000002356 85.0
DYD1_k127_4451109_14 HEAT repeats - - - 0.00000000000004653 81.0
DYD1_k127_4451109_15 Transcription factor K07736 - - 0.0005553 49.0
DYD1_k127_4451109_2 Sporulation related domain K16291 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007093 437.0
DYD1_k127_4451109_3 electron transfer activity K00428 - 1.11.1.5 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002125 427.0
DYD1_k127_4451109_4 TIGRFAM ABC exporter ATP-binding subunit, DevA family K02003 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007551 402.0
DYD1_k127_4451109_5 COG0491 Zn-dependent hydrolases, including glyoxylases - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006486 328.0
DYD1_k127_4451109_6 Patatin-like phospholipase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003857 343.0
DYD1_k127_4451109_7 Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family K01993 - - 0.00000000000000000000000000000000000000000000000000000000000000000000006751 252.0
DYD1_k127_4451109_8 Transcriptional regulator - - - 0.00000000000000000000000000000000000006632 155.0
DYD1_k127_4451109_9 YtkA-like - - - 0.0000000000000000000000000000003198 130.0
DYD1_k127_4472562_0 Adenylyl- / guanylyl cyclase, catalytic domain K01768 - 4.6.1.1 1.222e-200 649.0
DYD1_k127_4472562_1 short-chain dehydrogenase reductase SDR K08679 - 5.1.3.6 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002237 471.0
DYD1_k127_4472562_10 peptide chain release factor K15034 - - 0.000000000000000000000000000009143 123.0
DYD1_k127_4472562_11 CHRD domain - - - 0.00000000000000000000000008044 113.0
DYD1_k127_4472562_12 FecR protein - - - 0.0000000000000001033 88.0
DYD1_k127_4472562_13 Cytochrome c - - - 0.00000000000003819 79.0
DYD1_k127_4472562_2 Aminotransferase, class V - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003111 441.0
DYD1_k127_4472562_3 A protein kinase that phosphorylates Ser and Thr residues. Probably acts to suppress the effects of stress linked to accumulation of reactive oxygen species. Probably involved in the extracytoplasmic stress response - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003088 428.0
DYD1_k127_4472562_4 Belongs to the monovalent cation proton antiporter 2 (CPA2) transporter (TC 2.A.37) family - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004969 356.0
DYD1_k127_4472562_5 exo-alpha-(2->6)-sialidase activity - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000004336 279.0
DYD1_k127_4472562_6 Chain length determinant protein K16554 - - 0.000000000000000000000000000000000000000000000000000000000000000001194 247.0
DYD1_k127_4472562_7 Putative beta-barrel porin 2 - - - 0.000000000000000000000000000000000000000000000000000000000001626 226.0
DYD1_k127_4472562_8 Hydrolyzes cAMP to 5'-AMP. Plays an important regulatory role in modulating the intracellular concentration of cAMP, thereby influencing cAMP-dependent processes K03651 - 3.1.4.53 0.0000000000000000000000000000000000000000000000004403 186.0
DYD1_k127_4472562_9 COG1596 Periplasmic protein involved in polysaccharide export K01991 - - 0.000000000000000000000000000000000000000000000005387 178.0
DYD1_k127_4490247_0 heat shock protein DnaJ K05516 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001433 336.0
DYD1_k127_4490247_1 thiolester hydrolase activity K06889 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000002873 303.0
DYD1_k127_4490247_2 calcium- and calmodulin-responsive adenylate cyclase activity - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000001777 293.0
DYD1_k127_4490247_3 Belongs to the class-II aminoacyl-tRNA synthetase family K04567 - 6.1.1.6 0.000000000000000000000000000000000000000000000000000003819 196.0
DYD1_k127_4490247_4 3-beta hydroxysteroid dehydrogenase/isomerase family K08678 - 4.1.1.35 0.0000000000000000000004974 95.0
DYD1_k127_4490247_5 MerR HTH family regulatory protein K18997 - - 0.000000000000000000005986 99.0
DYD1_k127_4501293_0 Involved in the tonB-independent uptake of proteins - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003132 580.0
DYD1_k127_4501293_1 Thioesterase-like superfamily - - - 0.0000000000000000000000000000000000000000000000000000214 192.0
DYD1_k127_4501293_2 Predicted membrane protein (DUF2254) - - - 0.00000000000000000000000000004248 119.0
DYD1_k127_4501293_3 COG4968 Tfp pilus assembly protein PilE K02655 - - 0.00000000000000000000001016 106.0
DYD1_k127_4501293_4 - - - - 0.0000000000000000002781 98.0
DYD1_k127_4501293_5 PilX N-terminal K02673 - - 0.0000000000000002535 92.0
DYD1_k127_4501293_6 Prokaryotic N-terminal methylation motif K02671 - - 0.000000000000005033 83.0
DYD1_k127_4501293_7 Type IV Pilus-assembly protein W K02672 - - 0.000000003286 67.0
DYD1_k127_4501293_8 COG4970 Tfp pilus assembly protein FimT K08084 - - 0.00000006597 63.0
DYD1_k127_4501293_9 - K11275 - - 0.0003507 45.0
DYD1_k127_4517707_0 Is required not only for elongation of protein synthesis but also for the initiation of all mRNA translation through initiator tRNA(fMet) aminoacylation K01874 - 6.1.1.10 2.036e-286 893.0
DYD1_k127_4517707_1 Belongs to the dCTP deaminase family K01494 GO:0003674,GO:0003824,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006139,GO:0006220,GO:0006244,GO:0006253,GO:0006725,GO:0006753,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0008829,GO:0009056,GO:0009058,GO:0009117,GO:0009141,GO:0009143,GO:0009147,GO:0009149,GO:0009166,GO:0009200,GO:0009204,GO:0009211,GO:0009213,GO:0009219,GO:0009223,GO:0009262,GO:0009264,GO:0009314,GO:0009394,GO:0009628,GO:0009987,GO:0015949,GO:0016787,GO:0016810,GO:0016814,GO:0018130,GO:0019239,GO:0019438,GO:0019439,GO:0019637,GO:0019692,GO:0034404,GO:0034641,GO:0034654,GO:0034655,GO:0044237,GO:0044238,GO:0044248,GO:0044249,GO:0044270,GO:0044271,GO:0044281,GO:0044283,GO:0044424,GO:0044444,GO:0044464,GO:0046065,GO:0046386,GO:0046434,GO:0046483,GO:0046700,GO:0050896,GO:0055086,GO:0071704,GO:0072527,GO:0072529,GO:1901135,GO:1901136,GO:1901292,GO:1901360,GO:1901361,GO:1901362,GO:1901564,GO:1901565,GO:1901575,GO:1901576 3.5.4.13 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001336 346.0
DYD1_k127_4517707_2 Part of a membrane complex involved in electron transport K03617 GO:0003674,GO:0003824,GO:0005575,GO:0005623,GO:0005886,GO:0008150,GO:0008152,GO:0016020,GO:0016491,GO:0016651,GO:0044464,GO:0055114,GO:0071944 - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000001982 277.0
DYD1_k127_4517707_3 Part of a membrane complex involved in electron transport K03616 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000002575 274.0
DYD1_k127_4517707_4 Part of a membrane complex involved in electron transport K03615 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000002511 264.0
DYD1_k127_454472_0 Amidohydrolase family - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003967 589.0
DYD1_k127_454472_1 Belongs to the peptidase S8 family K17734 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000001412 317.0
DYD1_k127_454472_2 PFAM MotA TolQ ExbB proton channel family - - - 0.0000000000000000000000000000000000000000000000000000000000000001326 229.0
DYD1_k127_454472_3 Sulfatase-modifying factor enzyme 1 - - - 0.0000000000000000000000000000000000000000000000000000000000000001623 243.0
DYD1_k127_454472_4 - - - - 0.00000000000000000000000000581 117.0
DYD1_k127_454472_5 Peptidoglycan-binding domain 1 protein - - - 0.000000000000000000001623 99.0
DYD1_k127_454472_6 CHAT domain - - - 0.00000001652 68.0
DYD1_k127_454472_7 von Willebrand factor type A domain - - - 0.000005684 57.0
DYD1_k127_4583059_0 ATP-dependent serine protease that mediates the selective degradation of mutant and abnormal proteins as well as certain short-lived regulatory proteins. Required for cellular homeostasis and for survival from DNA damage and developmental changes induced by stress. Degrades polypeptides processively to yield small peptide fragments that are 5 to 10 amino acids long. Binds to DNA in a double-stranded, site-specific manner K01338 - 3.4.21.53 0.0 1111.0
DYD1_k127_4583059_1 Low-affinity potassium transport system. Interacts with Trk system potassium uptake protein TrkA K03498 - - 4.738e-217 683.0
DYD1_k127_4583059_10 - - - - 0.00000006605 54.0
DYD1_k127_4583059_11 - - - - 0.00000009054 53.0
DYD1_k127_4583059_12 - - - - 0.0000001316 53.0
DYD1_k127_4583059_13 - - - - 0.0003671 48.0
DYD1_k127_4583059_2 ATP-dependent specificity component of the Clp protease. It directs the protease to specific substrates. Can perform chaperone functions in the absence of ClpP K03544 - - 1.387e-215 675.0
DYD1_k127_4583059_3 Histidine kinase K07646 - 2.7.13.3 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002146 367.0
DYD1_k127_4583059_4 Cleaves peptides in various proteins in a process that requires ATP hydrolysis. Has a chymotrypsin-like activity. Plays a major role in the degradation of misfolded proteins K01358 - 3.4.21.92 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001925 325.0
DYD1_k127_4583059_5 Involved in protein export. Acts as a chaperone by maintaining the newly synthesized protein in an open conformation. Functions as a peptidyl-prolyl cis-trans isomerase K03545 GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0044424,GO:0044464 - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001934 332.0
DYD1_k127_4583059_6 PFAM Response regulator receiver domain K07667 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000178 271.0
DYD1_k127_4583059_7 pterin-4-alpha-carbinolamine dehydratase K01724 - 4.2.1.96 0.0000000000000000000000000000000000000000006084 161.0
DYD1_k127_4583059_8 Lrp/AsnC ligand binding domain K05800 - - 0.000000000000000000000000000000000000003167 151.0
DYD1_k127_4583059_9 - - - - 0.0000000005453 64.0
DYD1_k127_459766_0 TIGRFAM ATP-dependent helicase HrpA K03578 - 3.6.4.13 1.148e-212 674.0
DYD1_k127_459766_1 Catalyzes the cleavage of L-allo-threonine and L- threonine to glycine and acetaldehyde K01620 - 4.1.2.48 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006982 308.0
DYD1_k127_4676524_0 MacB-like periplasmic core domain K02004 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009254 543.0
DYD1_k127_4676524_1 FtsX-like permease family K02004 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003349 466.0
DYD1_k127_4676524_10 - - - - 0.00000000000000000000000000000004969 131.0
DYD1_k127_4676524_11 Alanine-zipper, major outer membrane lipoprotein - - - 0.0008692 46.0
DYD1_k127_4676524_2 Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family K02005 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008757 445.0
DYD1_k127_4676524_3 ABC transporter K02003 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000816 344.0
DYD1_k127_4676524_4 PFAM YkuD domain K16291 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002086 339.0
DYD1_k127_4676524_5 helix_turn _helix lactose operon repressor - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009124 333.0
DYD1_k127_4676524_6 TonB dependent receptor - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000006598 273.0
DYD1_k127_4676524_7 double-stranded DNA 3'-5' exodeoxyribonuclease activity - - - 0.000000000000000000000000000000000000000000000000002537 198.0
DYD1_k127_4676524_8 L,D-transpeptidase catalytic domain - - - 0.0000000000000000000000000000000000000000000000000589 187.0
DYD1_k127_4676524_9 Prokaryotic dksA/traR C4-type zinc finger - - - 0.000000000000000000000000000000003179 132.0
DYD1_k127_4700394_0 Facilitates transcription termination by a mechanism that involves Rho binding to the nascent RNA, activation of Rho's RNA-dependent ATPase activity, and release of the mRNA from the DNA template K03628 - - 6.047e-219 684.0
DYD1_k127_4700394_1 DEAD-box RNA helicase involved in RNA degradation. Has RNA-dependent ATPase activity and unwinds double-stranded RNA K03732 - 3.6.4.13 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002343 505.0
DYD1_k127_4700394_2 2-methylcitrate dehydratase K01720 - 4.2.1.79 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004081 375.0
DYD1_k127_4700394_3 ABC transporter K09812 GO:0000166,GO:0003674,GO:0005488,GO:0005524,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005886,GO:0008144,GO:0008150,GO:0009898,GO:0009987,GO:0016020,GO:0017076,GO:0019897,GO:0019898,GO:0030554,GO:0031234,GO:0032153,GO:0032553,GO:0032555,GO:0032559,GO:0035639,GO:0036094,GO:0042221,GO:0043167,GO:0043168,GO:0044424,GO:0044425,GO:0044459,GO:0044464,GO:0046677,GO:0050896,GO:0051301,GO:0071944,GO:0097159,GO:0097367,GO:0098552,GO:0098562,GO:1901265,GO:1901363 - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000001513 286.0
DYD1_k127_4700394_4 Belongs to the thioredoxin family K03671 - - 0.000000000000000000000000000000000000000000006119 167.0
DYD1_k127_4700394_5 Part of the ABC transporter FtsEX involved in cellular division K09811 - - 0.00000000000000000000000000000000000000009704 161.0
DYD1_k127_4708194_0 Aminotransferase class-V - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007682 359.0
DYD1_k127_4708194_1 PFAM Cyclic nucleotide-binding - - - 0.0000000000000000000000000000000000000000000000000000000000000000001578 239.0
DYD1_k127_4708194_2 - - - - 0.00000000000000000000000000000000000001146 149.0
DYD1_k127_4708194_3 Type VI secretion system effector, Hcp K11903 - - 0.0000000000000000000000008666 112.0
DYD1_k127_4708194_4 - - - - 0.000000000000000000000001083 105.0
DYD1_k127_4708194_5 Homospermidine synthase K00808 - 2.5.1.44 0.0000001999 61.0
DYD1_k127_4708194_6 Sulfatase K01133 - 3.1.6.6 0.0007876 47.0
DYD1_k127_4728360_0 Tricorn protease PDZ domain K03797,K08676 - 3.4.21.102 0.0 1156.0
DYD1_k127_4728360_1 FMN-dependent dehydrogenase K00101 - 1.1.2.3 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002228 519.0
DYD1_k127_4728360_2 KR domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000001603 304.0
DYD1_k127_4728360_3 Amidohydrolase K07045 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000003148 261.0
DYD1_k127_4728360_4 PFAM glycosyl transferase family 9 - - - 0.00000000000000000000000000000000000000000002391 164.0
DYD1_k127_4757422_0 Belongs to the peptidase M17 family K01255 - 3.4.11.1 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001241 483.0
DYD1_k127_4757422_1 Belongs to the peptidase S1C family K04771,K04772 - 3.4.21.107 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001246 470.0
DYD1_k127_4757422_2 Exodeoxyribonuclease IX - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001756 312.0
DYD1_k127_4757422_3 HNH endonuclease - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000004437 284.0
DYD1_k127_4757422_4 Protein of unknown function (DUF3667) - - - 0.000000000000000000000000000000000000000000000000000009307 201.0
DYD1_k127_4759724_0 Catalyzes the conversion of acetate into acetyl-CoA (AcCoA), an essential intermediate at the junction of anabolic and catabolic pathways. AcsA undergoes a two-step reaction. In the first half reaction, AcsA combines acetate with ATP to form acetyl-adenylate (AcAMP) intermediate. In the second half reaction, it can then transfer the acetyl group from AcAMP to the sulfhydryl group of CoA, forming the product AcCoA K01895 - 6.2.1.1 1.651e-310 961.0
DYD1_k127_4759724_1 - - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001028 480.0
DYD1_k127_4759724_2 MTH538 TIR-like domain (DUF1863) - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001248 360.0
DYD1_k127_4759724_3 D-isomer specific 2-hydroxyacid dehydrogenase K00018 - 1.1.1.29 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001351 320.0
DYD1_k127_4759724_4 Eukaryotic integral membrane protein (DUF1751) K09650 - 3.4.21.105 0.00000000000000000000000000000000000000000000000000000000001 212.0
DYD1_k127_4759724_5 protein F13E9.13, mitochondrial-like K06971 - - 0.000000000000000000000000000000000000000000000000000003189 198.0
DYD1_k127_4759724_6 Cytokinin riboside 5'-monophosphate phosphoribohydrolase K06966 - 3.2.2.10 0.00000000000000000000000000000000000000000000000009725 184.0
DYD1_k127_4759724_7 Biopolymer transport protein ExbD/TolR K03559 - - 0.00000000000000000000000000006646 120.0
DYD1_k127_4759724_8 Dodecin K09165 - - 0.000000000000000000831 90.0
DYD1_k127_4759724_9 - - - - 0.0003142 52.0
DYD1_k127_4837601_0 Catalyzes the attachment of threonine to tRNA(Thr) in a two-step reaction L-threonine is first activated by ATP to form Thr-AMP and then transferred to the acceptor end of tRNA(Thr) K01868 GO:0003674,GO:0003824,GO:0004812,GO:0004829,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006082,GO:0006139,GO:0006399,GO:0006412,GO:0006418,GO:0006435,GO:0006518,GO:0006520,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0016070,GO:0016874,GO:0016875,GO:0019538,GO:0019752,GO:0034641,GO:0034645,GO:0034660,GO:0043038,GO:0043039,GO:0043043,GO:0043170,GO:0043436,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044281,GO:0044424,GO:0044464,GO:0046483,GO:0071704,GO:0090304,GO:0140098,GO:0140101,GO:1901360,GO:1901564,GO:1901566,GO:1901576 6.1.1.3 7.725e-303 939.0
DYD1_k127_4837601_1 Belongs to the phenylalanyl-tRNA synthetase beta subunit family. Type 1 subfamily K01890 GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006082,GO:0006139,GO:0006399,GO:0006412,GO:0006418,GO:0006432,GO:0006518,GO:0006520,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009328,GO:0009987,GO:0010467,GO:0016070,GO:0019538,GO:0019752,GO:0032991,GO:0034641,GO:0034645,GO:0034660,GO:0043038,GO:0043039,GO:0043043,GO:0043170,GO:0043436,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044281,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0071704,GO:0090304,GO:1901360,GO:1901564,GO:1901566,GO:1901576,GO:1902494 6.1.1.20 3.89e-237 758.0
DYD1_k127_4837601_10 Catalyzes the attachment of glutamate to tRNA(Glu) in a two-step reaction glutamate is first activated by ATP to form Glu-AMP and then transferred to the acceptor end of tRNA(Glu) K01885 - 6.1.1.17 0.00000000000000000000000000000000000000000000000000000000000003446 219.0
DYD1_k127_4837601_11 Endonuclease that specifically degrades the RNA of RNA- DNA hybrids K03469 - 3.1.26.4 0.000000000000000000000000000000000000000000000000000000000001409 213.0
DYD1_k127_4837601_12 COG4967 Tfp pilus assembly protein PilV K02671 - - 0.00000000000000000000000000000000000000000000000000000000001302 231.0
DYD1_k127_4837601_13 PFAM regulatory protein, MerR - - - 0.00000000000000000000000000000000000000000000000000004625 192.0
DYD1_k127_4837601_14 Binds directly to 23S ribosomal RNA and is necessary for the in vitro assembly process of the 50S ribosomal subunit. It is not involved in the protein synthesizing functions of that subunit K02887 - - 0.00000000000000000000000000000000000000000000000003095 180.0
DYD1_k127_4837601_15 This protein is one of the two subunits of integration host factor, a specific DNA-binding protein that functions in genetic recombination as well as in transcriptional and translational control K04764 GO:0000976,GO:0001067,GO:0001130,GO:0001216,GO:0001217,GO:0003674,GO:0003676,GO:0003677,GO:0003690,GO:0003700,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006139,GO:0006351,GO:0006355,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009889,GO:0009890,GO:0009891,GO:0009892,GO:0009893,GO:0009987,GO:0010467,GO:0010468,GO:0010556,GO:0010557,GO:0010558,GO:0010604,GO:0010605,GO:0010628,GO:0010629,GO:0016070,GO:0018130,GO:0019219,GO:0019222,GO:0019438,GO:0031323,GO:0031324,GO:0031325,GO:0031326,GO:0031327,GO:0031328,GO:0032774,GO:0032991,GO:0032993,GO:0034641,GO:0034645,GO:0034654,GO:0043170,GO:0043565,GO:0044212,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044271,GO:0044424,GO:0044444,GO:0044464,GO:0045892,GO:0045893,GO:0045934,GO:0045935,GO:0046483,GO:0048518,GO:0048519,GO:0048522,GO:0048523,GO:0050789,GO:0050794,GO:0051171,GO:0051172,GO:0051173,GO:0051252,GO:0051253,GO:0051254,GO:0060255,GO:0065007,GO:0071704,GO:0080090,GO:0090304,GO:0097159,GO:0097659,GO:0140110,GO:1901360,GO:1901362,GO:1901363,GO:1901576,GO:1902679,GO:1902680,GO:1903506,GO:1903507,GO:1903508,GO:1990837,GO:2000112,GO:2000113,GO:2001141 - 0.0000000000000000000000000000000000000001626 152.0
DYD1_k127_4837601_16 Pilus assembly protein PilX - - - 0.0000000000000000000000000105 126.0
DYD1_k127_4837601_17 Type IV minor pilin ComP, DNA uptake sequence receptor K02655 - - 0.00000000000000000000211 100.0
DYD1_k127_4837601_18 Belongs to the bacterial ribosomal protein bL35 family K02916 - - 0.000000000000000000005042 94.0
DYD1_k127_4837601_19 prepilin peptidase dependent protein K02680 - - 0.00000000002983 72.0
DYD1_k127_4837601_2 Belongs to the class-II aminoacyl-tRNA synthetase family. Phe-tRNA synthetase alpha subunit type 1 subfamily K01889 GO:0003674,GO:0003824,GO:0004812,GO:0004826,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006082,GO:0006139,GO:0006399,GO:0006412,GO:0006418,GO:0006432,GO:0006518,GO:0006520,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0016070,GO:0016874,GO:0016875,GO:0019538,GO:0019752,GO:0034641,GO:0034645,GO:0034660,GO:0043038,GO:0043039,GO:0043043,GO:0043170,GO:0043436,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044281,GO:0044424,GO:0044464,GO:0046483,GO:0071704,GO:0090304,GO:0140098,GO:0140101,GO:1901360,GO:1901564,GO:1901566,GO:1901576 6.1.1.20 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003063 464.0
DYD1_k127_4837601_20 COG4970 Tfp pilus assembly protein FimT K08085 - - 0.0000006028 59.0
DYD1_k127_4837601_21 Type II transport protein GspH K08084 - - 0.000001395 58.0
DYD1_k127_4837601_23 Methyl-transferase - - - 0.00001975 55.0
DYD1_k127_4837601_24 DNA polymerase alpha chain like domain K02337 - 2.7.7.7 0.0004742 44.0
DYD1_k127_4837601_25 COG1961 Site-specific recombinases, DNA invertase Pin homologs - - - 0.0006373 44.0
DYD1_k127_4837601_3 COG0741 Soluble lytic murein transglycosylase and related regulatory proteins (some contain LysM invasin domains) K08307 GO:0003674,GO:0003824,GO:0005575,GO:0005623,GO:0008150,GO:0008932,GO:0008933,GO:0009893,GO:0016020,GO:0016740,GO:0016757,GO:0019222,GO:0030288,GO:0030313,GO:0031975,GO:0042597,GO:0043085,GO:0044093,GO:0044464,GO:0048518,GO:0050789,GO:0050790,GO:0051341,GO:0051353,GO:0061783,GO:0065007,GO:0065009 - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001394 434.0
DYD1_k127_4837601_4 Converts GTP to 7,8-dihydroneopterin triphosphate K09007 - 3.5.4.16 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001724 407.0
DYD1_k127_4837601_5 Murein-degrading enzyme that degrades murein glycan strands and insoluble, high-molecular weight murein sacculi, with the concomitant formation of a 1,6-anhydromuramoyl product. Lytic transglycosylases (LTs) play an integral role in the metabolism of the peptidoglycan (PG) sacculus. Their lytic action creates space within the PG sacculus to allow for its expansion as well as for the insertion of various structures such as secretion systems and flagella K18691 GO:0000270,GO:0003674,GO:0003824,GO:0005575,GO:0005623,GO:0006022,GO:0006026,GO:0006027,GO:0006807,GO:0008150,GO:0008152,GO:0008933,GO:0009056,GO:0009057,GO:0009253,GO:0009279,GO:0016020,GO:0016740,GO:0016757,GO:0019867,GO:0030203,GO:0030312,GO:0030313,GO:0031975,GO:0043170,GO:0044462,GO:0044464,GO:0061783,GO:0071704,GO:0071944,GO:1901135,GO:1901136,GO:1901564,GO:1901565,GO:1901575 - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003459 402.0
DYD1_k127_4837601_6 Peptidase family M23 - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000156 303.0
DYD1_k127_4837601_7 DNA polymerase III is a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria. The epsilon subunit contain the editing function and is a proofreading 3'-5' exonuclease K02342,K14159 GO:0003674,GO:0003824,GO:0004518,GO:0004527,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006139,GO:0006259,GO:0006260,GO:0006261,GO:0006281,GO:0006725,GO:0006807,GO:0006950,GO:0006974,GO:0008150,GO:0008152,GO:0008408,GO:0009058,GO:0009059,GO:0009360,GO:0009987,GO:0016787,GO:0016788,GO:0032991,GO:0033554,GO:0034641,GO:0034645,GO:0042575,GO:0043170,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044424,GO:0044444,GO:0044464,GO:0044776,GO:0045004,GO:0045005,GO:0046483,GO:0050896,GO:0051716,GO:0061695,GO:0071704,GO:0090304,GO:0090305,GO:1901360,GO:1901576,GO:1902494,GO:1990234 2.7.7.7,3.1.26.4 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000001787 286.0
DYD1_k127_4837601_8 Thiolesterase that catalyzes the hydrolysis of S-D- lactoyl-glutathione to form glutathione and D-lactic acid K01069 - 3.1.2.6 0.000000000000000000000000000000000000000000000000000000000000000000000001956 261.0
DYD1_k127_4837601_9 IF-3 binds to the 30S ribosomal subunit and shifts the equilibrum between 70S ribosomes and their 50S and 30S subunits in favor of the free subunits, thus enhancing the availability of 30S subunits on which protein synthesis initiation begins K02520 - - 0.000000000000000000000000000000000000000000000000000000000000001783 222.0
DYD1_k127_4852737_0 TonB dependent receptor K02014 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009719 610.0
DYD1_k127_4852737_1 Belongs to the class-IV pyridoxal-phosphate-dependent aminotransferase family K00826 GO:0003674,GO:0003824,GO:0004084,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006082,GO:0006520,GO:0006531,GO:0006532,GO:0006551,GO:0006573,GO:0006807,GO:0008150,GO:0008152,GO:0008483,GO:0008652,GO:0009058,GO:0009066,GO:0009067,GO:0009081,GO:0009082,GO:0009098,GO:0009099,GO:0009987,GO:0016053,GO:0016740,GO:0016769,GO:0019752,GO:0042802,GO:0043436,GO:0043648,GO:0043650,GO:0044237,GO:0044238,GO:0044249,GO:0044281,GO:0044283,GO:0044424,GO:0044444,GO:0044464,GO:0046394,GO:0071704,GO:1901564,GO:1901566,GO:1901576,GO:1901605,GO:1901607 2.6.1.42 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001225 381.0
DYD1_k127_4852737_2 OST-HTH/LOTUS domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004589 374.0
DYD1_k127_4852737_3 COG1230 Co Zn Cd efflux system component K16264 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005329 340.0
DYD1_k127_4852737_4 aldo-keto reductase (NADP) activity K05275 - 1.1.1.65 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003443 339.0
DYD1_k127_4852737_5 Histidine-specific methyltransferase, SAM-dependent - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000001566 287.0
DYD1_k127_4852737_6 - - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000004316 275.0
DYD1_k127_4852737_7 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD K01802 - 5.2.1.8 0.00000000000000000000000000000000000000000000000000000000000000000000003333 250.0
DYD1_k127_4852737_8 - - - - 0.0000000000000000000000000000004601 126.0
DYD1_k127_4852737_9 Ribonuclease B OB domain - - - 0.000000004699 59.0
DYD1_k127_4860951_0 Belongs to the GPAT DAPAT family K00631 - 2.3.1.15 4.735e-252 810.0
DYD1_k127_4860951_1 UvrD-like helicase C-terminal domain K03657 GO:0003674,GO:0003678,GO:0003824,GO:0004003,GO:0004386,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006139,GO:0006259,GO:0006260,GO:0006261,GO:0006281,GO:0006289,GO:0006298,GO:0006725,GO:0006807,GO:0006950,GO:0006974,GO:0006996,GO:0008026,GO:0008094,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009314,GO:0009628,GO:0009987,GO:0015616,GO:0016043,GO:0016462,GO:0016787,GO:0016817,GO:0016818,GO:0016887,GO:0017111,GO:0017116,GO:0022607,GO:0031297,GO:0032392,GO:0032508,GO:0033554,GO:0034641,GO:0034645,GO:0042623,GO:0042802,GO:0043142,GO:0043170,GO:0043933,GO:0044085,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044424,GO:0044444,GO:0044464,GO:0045005,GO:0046483,GO:0050896,GO:0051259,GO:0051260,GO:0051276,GO:0051716,GO:0065003,GO:0070035,GO:0070581,GO:0071103,GO:0071704,GO:0071840,GO:0090304,GO:0140097,GO:1901360,GO:1901576 3.6.4.12 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001509 500.0
DYD1_k127_4860951_2 Part of the tripartite ATP-independent periplasmic (TRAP) transport system - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005897 471.0
DYD1_k127_4860951_3 Catalyzes the decarboxylation of orotidine 5'- monophosphate (OMP) to uridine 5'-monophosphate (UMP) K01591 GO:0003674,GO:0003824,GO:0004590,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006139,GO:0006206,GO:0006207,GO:0006220,GO:0006221,GO:0006725,GO:0006753,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009112,GO:0009117,GO:0009165,GO:0009218,GO:0009220,GO:0009259,GO:0009260,GO:0009987,GO:0015949,GO:0016829,GO:0016830,GO:0016831,GO:0018130,GO:0019438,GO:0019637,GO:0019693,GO:0019856,GO:0034641,GO:0034654,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0044424,GO:0044444,GO:0044464,GO:0046112,GO:0046390,GO:0046483,GO:0055086,GO:0071704,GO:0072527,GO:0072528,GO:0090407,GO:1901135,GO:1901137,GO:1901293,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576 4.1.1.23 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000001249 287.0
DYD1_k127_4860951_4 Serine aminopeptidase, S33 - - - 0.0000000000000000000000000000000000000000000000000000000004698 214.0
DYD1_k127_4860951_5 Protein of unknown function (DUF465) - - - 0.00000002482 61.0
DYD1_k127_4860951_6 - - - - 0.00000003705 60.0
DYD1_k127_4860951_7 - - - - 0.00000006922 59.0
DYD1_k127_4956364_0 RimK-like ATP-grasp domain K03802 - 6.3.2.29,6.3.2.30 0.0 1298.0
DYD1_k127_4956364_1 Mur ligase middle domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009018 469.0
DYD1_k127_4956364_2 Involved in base excision repair of DNA damaged by oxidation or by mutagenic agents. Acts as DNA glycosylase that recognizes and removes damaged bases. Has a preference for oxidized purines, such as 7,8-dihydro-8-oxoguanine (8-oxoG). Has AP (apurinic apyrimidinic) lyase activity and introduces nicks in the DNA strand. Cleaves the DNA backbone by beta-delta elimination to generate a single-strand break at the site of the removed base with both 3'- and 5'-phosphates K10563 - 3.2.2.23,4.2.99.18 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004115 324.0
DYD1_k127_4956364_3 Belongs to the peptidase S51 family K13282 - 3.4.15.6 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003435 311.0
DYD1_k127_4956364_4 deoxynucleoside kinase activity K00857 - 2.7.1.21 0.0000000000000000000000000000000000000000000000000000000000000000000000000003355 261.0
DYD1_k127_4956364_5 Belongs to the bacterial ribosomal protein bL28 family K02902 - - 0.000000000000000000000000000000000001712 140.0
DYD1_k127_4956364_6 Belongs to the bacterial ribosomal protein bL33 family K02913 GO:0000027,GO:0003674,GO:0003735,GO:0005198,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0006412,GO:0006518,GO:0006807,GO:0006996,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0015934,GO:0016043,GO:0019538,GO:0022607,GO:0022613,GO:0022618,GO:0022625,GO:0022626,GO:0032991,GO:0034622,GO:0034641,GO:0034645,GO:0042221,GO:0042254,GO:0042255,GO:0042273,GO:0043043,GO:0043170,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043603,GO:0043604,GO:0043933,GO:0044085,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:0046677,GO:0050896,GO:0065003,GO:0070925,GO:0071704,GO:0071826,GO:0071840,GO:1901564,GO:1901566,GO:1901576,GO:1990904 - 0.000000000000000000000000208 105.0
DYD1_k127_4973108_0 Prolyl oligopeptidase family - - - 2.655e-239 759.0
DYD1_k127_4973108_1 Peptidase family S58 - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007789 465.0
DYD1_k127_4973108_2 Cupin domain - - - 0.00000000000000000000000000000000000000000002619 164.0
DYD1_k127_4973108_3 Sigma-70 region 2 K03088 - - 0.0000000000000000000000000000007457 129.0
DYD1_k127_4973108_4 Tetratricopeptide TPR_2 repeat protein - - - 0.000000000000000448 84.0
DYD1_k127_5000962_0 PFAM Glucose Sorbosone dehydrogenase K21430 - - 6.826e-249 780.0
DYD1_k127_5000962_1 Paraquat-inducible protein A - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001289 315.0
DYD1_k127_5000962_2 - - - - 0.000601 43.0
DYD1_k127_5014383_0 Catalyzes the ATP-dependent amination of UTP to CTP with either L-glutamine or ammonia as the source of nitrogen. Regulates intracellular CTP levels through interactions with the four ribonucleotide triphosphates K01937 - 6.3.4.2 4.741e-241 759.0
DYD1_k127_5014383_1 COG2256 ATPase related to the helicase subunit of the Holliday junction resolvase K07478 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006129 602.0
DYD1_k127_5014383_10 - - - - 0.0008077 46.0
DYD1_k127_5014383_2 Catalyzes the reversible conversion of 2- phosphoglycerate into phosphoenolpyruvate. It is essential for the degradation of carbohydrates via glycolysis K01689 - 4.2.1.11 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000012 592.0
DYD1_k127_5014383_3 3-deoxy-D-manno-octulosonic acid 8-phosphate synthase K01627 - 2.5.1.55 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005564 442.0
DYD1_k127_5014383_4 Histidine kinase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007085 343.0
DYD1_k127_5014383_5 regulator - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003476 328.0
DYD1_k127_5014383_6 Involved in the biosynthesis of isopentenyl diphosphate (IPP) and dimethylallyl diphosphate (DMAPP), two major building blocks of isoprenoid compounds. Catalyzes the conversion of 4- diphosphocytidyl-2-C-methyl-D-erythritol 2-phosphate (CDP-ME2P) to 2-C-methyl-D-erythritol 2,4-cyclodiphosphate (ME-CPP) with a corresponding release of cytidine 5-monophosphate (CMP) K01770 - 4.6.1.12 0.0000000000000000000000000000000000000000000000000000000000000002059 224.0
DYD1_k127_5014383_7 Catalyzes the formation of 4-diphosphocytidyl-2-C- methyl-D-erythritol from CTP and 2-C-methyl-D-erythritol 4- phosphate (MEP) K00991 - 2.7.7.60 0.00000000000000000000000000000000000000000000000000001554 197.0
DYD1_k127_5014383_8 Essential cell division protein. May link together the upstream cell division proteins, which are predominantly cytoplasmic, with the downstream cell division proteins, which are predominantly periplasmic K05589 - - 0.00000000000000000000253 102.0
DYD1_k127_5014383_9 FHA domain - - - 0.000000000157 67.0
DYD1_k127_5033515_0 Catalyzes the acyloin condensation reaction between C atoms 2 and 3 of pyruvate and glyceraldehyde 3-phosphate to yield 1-deoxy-D-xylulose-5-phosphate (DXP) K01662 - 2.2.1.7 8.007e-271 846.0
DYD1_k127_5033515_1 COG2303 Choline dehydrogenase and related flavoproteins K06151 - 1.1.99.3 2.285e-217 687.0
DYD1_k127_5033515_10 Predicted membrane protein (DUF2238) K08984 GO:0005575,GO:0005623,GO:0005886,GO:0016020,GO:0044464,GO:0071944 - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000118 271.0
DYD1_k127_5033515_11 Ligates lysine onto the cytidine present at position 34 of the AUA codon-specific tRNA(Ile) that contains the anticodon CAU, in an ATP-dependent manner. Cytidine is converted to lysidine, thus changing the amino acid specificity of the tRNA from methionine to isoleucine K04075 - 6.3.4.19 0.0000000000000000000000000000000000000000000000000000000000000000000000000001162 275.0
DYD1_k127_5033515_12 Phosphoglycolate phosphatase K22292 - 3.1.3.105 0.000000000000000000000000000000000000000000000000002547 195.0
DYD1_k127_5033515_13 Glutathione-dependent formaldehyde-activating enzyme - - - 0.000000000000000000000000000000000000000000004497 166.0
DYD1_k127_5033515_14 Histidine triad (HIT) protein K02503 - - 0.000000000000000000000000000000000000000000008486 166.0
DYD1_k127_5033515_15 PFAM Endoribonuclease L-PSP - - - 0.00000000000000000000000000000000000000000006912 164.0
DYD1_k127_5033515_16 PFAM CMP dCMP deaminase zinc-binding K01489 - 3.5.4.5 0.0000000000000000000000000000000000003241 146.0
DYD1_k127_5033515_17 COG0589 Universal stress protein UspA and related nucleotide-binding proteins K06149 - - 0.00000000000000000000000000000000355 135.0
DYD1_k127_5033515_18 Regulatory protein, FmdB family - - - 0.00000000000000000000783 94.0
DYD1_k127_5033515_2 The enzymes which catalyze the reversible phosphorolysis of pyrimidine nucleosides are involved in the degradation of these compounds and in their utilization as carbon and energy sources, or in the rescue of pyrimidine bases for nucleotide synthesis K00758 GO:0003674,GO:0003824,GO:0004645,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006139,GO:0006213,GO:0006725,GO:0006807,GO:0006950,GO:0006974,GO:0008150,GO:0008152,GO:0009032,GO:0009116,GO:0009987,GO:0016740,GO:0016757,GO:0016758,GO:0016763,GO:0033554,GO:0034641,GO:0044237,GO:0044238,GO:0044281,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0050896,GO:0051716,GO:0055086,GO:0071704,GO:0072527,GO:1901135,GO:1901360,GO:1901564,GO:1901657 2.4.2.4 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001731 477.0
DYD1_k127_5033515_20 Bidirectionally degrades single-stranded DNA into large acid-insoluble oligonucleotides, which are then degraded further into small acid-soluble oligonucleotides K03602 - 3.1.11.6 0.0000000000000005954 81.0
DYD1_k127_5033515_21 Squalene synthase HpnD K02291 - 2.5.1.32,2.5.1.99 0.00005491 55.0
DYD1_k127_5033515_3 Component of the acetyl coenzyme A carboxylase (ACC) complex. First, biotin carboxylase catalyzes the carboxylation of biotin on its carrier protein (BCCP) and then the CO(2) group is transferred by the carboxyltransferase to acetyl-CoA to form malonyl-CoA K01962 GO:0001676,GO:0003674,GO:0003824,GO:0003989,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006082,GO:0006629,GO:0006631,GO:0006633,GO:0008150,GO:0008152,GO:0008610,GO:0009058,GO:0009317,GO:0009329,GO:0009987,GO:0016053,GO:0016421,GO:0016874,GO:0016885,GO:0019752,GO:0032787,GO:0032991,GO:0042759,GO:0042802,GO:0043436,GO:0044237,GO:0044238,GO:0044249,GO:0044255,GO:0044281,GO:0044283,GO:0044424,GO:0044444,GO:0044464,GO:0046394,GO:0071704,GO:0072330,GO:1901576,GO:1902494,GO:1990234 2.1.3.15,6.4.1.2 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003995 456.0
DYD1_k127_5033515_4 Catalyzes the deamination of 5-methylthioadenosine and S-adenosyl-L-homocysteine into 5-methylthioinosine and S-inosyl-L- homocysteine, respectively. Is also able to deaminate adenosine K12960 - 3.5.4.28,3.5.4.31 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001241 453.0
DYD1_k127_5033515_5 Involved in peptide bond synthesis. Alleviates ribosome stalling that occurs when 3 or more consecutive Pro residues or the sequence PPG is present in a protein, possibly by augmenting the peptidyl transferase activity of the ribosome. Modification of Lys-34 is required for alleviation K02356 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001586 309.0
DYD1_k127_5033515_6 Belongs to the FPP GGPP synthase family K00795,K13789 - 2.5.1.1,2.5.1.10,2.5.1.29 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000003226 302.0
DYD1_k127_5033515_7 Catalyzes the tRNA-independent activation of glutamate in presence of ATP and the subsequent transfer of glutamate onto a tRNA(Asp). Glutamate is transferred on the 2-amino-5-(4,5- dihydroxy-2-cyclopenten-1-yl) moiety of the queuosine in the wobble position of the QUC anticodon K01894 GO:0000166,GO:0002097,GO:0003674,GO:0005488,GO:0005524,GO:0006139,GO:0006396,GO:0006399,GO:0006400,GO:0006725,GO:0006807,GO:0008033,GO:0008144,GO:0008150,GO:0008152,GO:0008270,GO:0009451,GO:0009987,GO:0010467,GO:0016070,GO:0017076,GO:0030554,GO:0032553,GO:0032555,GO:0032559,GO:0034470,GO:0034641,GO:0034660,GO:0035639,GO:0036094,GO:0043167,GO:0043168,GO:0043169,GO:0043170,GO:0043412,GO:0044237,GO:0044238,GO:0046483,GO:0046872,GO:0046914,GO:0071704,GO:0090304,GO:0097159,GO:0097367,GO:1901265,GO:1901360,GO:1901363 - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000003011 292.0
DYD1_k127_5033515_8 O-methyltransferase that catalyzes the 2 O-methylation steps in the ubiquinone biosynthetic pathway K00568 GO:0003674,GO:0003824,GO:0005488,GO:0005543,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006732,GO:0006733,GO:0006743,GO:0006744,GO:0006950,GO:0006970,GO:0006972,GO:0008150,GO:0008152,GO:0008168,GO:0008171,GO:0008289,GO:0008689,GO:0008757,GO:0009058,GO:0009108,GO:0009628,GO:0009651,GO:0009987,GO:0016740,GO:0016741,GO:0032259,GO:0042180,GO:0042181,GO:0042538,GO:0043167,GO:0043168,GO:0043431,GO:0044237,GO:0044249,GO:0044281,GO:0044283,GO:0044424,GO:0044444,GO:0044464,GO:0050896,GO:0051186,GO:0051188,GO:0061542,GO:0071704,GO:1901576,GO:1901611,GO:1901661,GO:1901663 2.1.1.222,2.1.1.64 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000212 283.0
DYD1_k127_5033515_9 COG2202 FOG PAS PAC domain K21025 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000003629 293.0
DYD1_k127_5056096_0 TIGRFAM glutamine synthetase, type I K01915 - 6.3.1.2 6.044e-234 732.0
DYD1_k127_5056096_1 Zinc carboxypeptidase - - - 1.076e-212 689.0
DYD1_k127_5056096_10 Lipid A biosynthesis acyltransferase K02517 - 2.3.1.241 0.000000000000000000000000000000000000000000000000000000000002411 222.0
DYD1_k127_5056096_11 rejects L-amino acids rather than detecting D-amino acids in the active site. By recycling D-aminoacyl-tRNA to D-amino acids and free tRNA molecules, this enzyme counteracts the toxicity associated with the formation of D-aminoacyl-tRNA entities in vivo and helps enforce protein L-homochirality K07560 - - 0.0000000000000000000000000000000000000000000000000000001053 198.0
DYD1_k127_5056096_12 His Kinase A (phosphoacceptor) domain K07708 - 2.7.13.3 0.00000000000000000000000000000000000000000000000002193 193.0
DYD1_k127_5056096_13 COG0457 FOG TPR repeat - - - 0.000000000000000000000001994 105.0
DYD1_k127_5056096_14 PFAM multicopper oxidase type K08100 - 1.3.3.5 0.00000000000000002787 96.0
DYD1_k127_5056096_16 Domain of unknown function (DUF4390) - - - 0.000002361 58.0
DYD1_k127_5056096_2 Low-affinity potassium transport system. Interacts with Trk system potassium uptake protein TrkA K03498 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001033 557.0
DYD1_k127_5056096_3 COG0569 K transport systems, NAD-binding component K03499 GO:0003674,GO:0005215,GO:0005575,GO:0006810,GO:0006811,GO:0006812,GO:0006813,GO:0008150,GO:0008324,GO:0015075,GO:0015672,GO:0016020,GO:0022857,GO:0030001,GO:0034220,GO:0051179,GO:0051234,GO:0055085,GO:0098655 - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007124 553.0
DYD1_k127_5056096_4 Nitrogen regulation K07712 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003867 514.0
DYD1_k127_5056096_5 signal transduction histidine kinase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004129 494.0
DYD1_k127_5056096_6 Response regulator receiver K13599 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001385 424.0
DYD1_k127_5056096_7 Specifically methylates the cytosine at position 967 (m5C967) of 16S rRNA K03500 GO:0000154,GO:0001510,GO:0003674,GO:0003824,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006139,GO:0006364,GO:0006396,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0008168,GO:0008169,GO:0008173,GO:0008649,GO:0008757,GO:0009383,GO:0009451,GO:0009987,GO:0010467,GO:0016070,GO:0016072,GO:0016434,GO:0016740,GO:0016741,GO:0022613,GO:0031167,GO:0032259,GO:0034470,GO:0034641,GO:0034660,GO:0042254,GO:0043170,GO:0043412,GO:0043414,GO:0044085,GO:0044237,GO:0044238,GO:0044260,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0070475,GO:0071704,GO:0071840,GO:0090304,GO:0140098,GO:0140102,GO:1901360 2.1.1.176 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001573 387.0
DYD1_k127_5056096_8 Catalyzes the dephosphorylation of undecaprenyl diphosphate (UPP). Confers resistance to bacitracin K06153 - 3.6.1.27 0.00000000000000000000000000000000000000000000000000000000000000000000000000008861 266.0
DYD1_k127_5056096_9 Urate oxidase N-terminal - - - 0.00000000000000000000000000000000000000000000000000000000000000001448 231.0
DYD1_k127_5066789_0 Amidohydrolase family K01464 - 3.5.2.2 2.572e-233 728.0
DYD1_k127_5066789_1 Bacterial capsule synthesis protein PGA_cap K07282 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006814 436.0
DYD1_k127_5066789_2 Domain of unknown function (DUF4156) - - - 0.000000000000000000005437 95.0
DYD1_k127_5107575_0 May play a key role in the regulation of the intracellular concentration of adenosylhomocysteine K01251 - 3.3.1.1 1.217e-245 766.0
DYD1_k127_5107575_1 Methylenetetrahydrofolate reductase K00297 - 1.5.1.20 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002922 345.0
DYD1_k127_5107575_2 COG1446 Asparaginase K01424,K13051 - 3.4.19.5,3.5.1.1 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000456 336.0
DYD1_k127_5107575_3 amine dehydrogenase activity - - - 0.0000000000000000000000000000000000000000000000003148 196.0
DYD1_k127_5107575_4 DNA mismatch repair protein MutT K01515 - 3.6.1.13 0.00000000000000000000000000000000000000000000001116 179.0
DYD1_k127_5203983_0 Topoisomerase IV is essential for chromosome segregation. It relaxes supercoiled DNA. Performs the decatenation events required during the replication of a circular DNA molecule K02621 GO:0000819,GO:0003674,GO:0003676,GO:0003677,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005886,GO:0006139,GO:0006259,GO:0006265,GO:0006276,GO:0006725,GO:0006807,GO:0006996,GO:0007049,GO:0007059,GO:0007062,GO:0008150,GO:0008152,GO:0009330,GO:0009987,GO:0016020,GO:0016043,GO:0019897,GO:0019898,GO:0022402,GO:0030541,GO:0032991,GO:0034641,GO:0043170,GO:0044237,GO:0044238,GO:0044260,GO:0044424,GO:0044425,GO:0044444,GO:0044459,GO:0044464,GO:0046483,GO:0051276,GO:0071103,GO:0071704,GO:0071840,GO:0071944,GO:0090304,GO:0097159,GO:0098813,GO:1901360,GO:1901363 - 0.0 1031.0
DYD1_k127_5203983_1 Adenylate cyclase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002769 519.0
DYD1_k127_5203983_2 - - - - 0.000000001401 63.0
DYD1_k127_524497_0 Sulfatase - - - 2.811e-217 700.0
DYD1_k127_524497_1 Endonuclease/Exonuclease/phosphatase family - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003004 388.0
DYD1_k127_524497_2 damaged site, the DNA wraps around one UvrB monomer. DNA wrap is dependent on ATP binding by UvrB and probably causes local melting of the DNA helix, facilitating insertion of UvrB beta-hairpin between the DNA strands. Then UvrB probes one DNA strand for the presence of a lesion. If a lesion is found the UvrA subunits dissociate and the UvrB-DNA preincision complex is formed. This complex is subsequently bound by UvrC and the second UvrB is released. If no lesion is found, the DNA wraps around the other UvrB subunit that will check the other stand for damage K03702 GO:0003674,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0008150,GO:0009314,GO:0009380,GO:0009628,GO:0032991,GO:0042802,GO:0044424,GO:0044464,GO:0050896,GO:1902494,GO:1905347,GO:1905348,GO:1990391 - 0.000000000000000000000000000000000000000000000004968 176.0
DYD1_k127_524497_3 TIGRFAM SUF system FeS assembly protein, NifU family K04488 - - 0.0000000000000000000000404 106.0
DYD1_k127_5248384_0 PFAM Transglutaminase-like K22452 - 2.3.2.13 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001926 469.0
DYD1_k127_5248384_1 Predicted membrane protein (DUF2207) - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001484 404.0
DYD1_k127_5248384_2 ATPase family associated with various cellular activities (AAA) K03924 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008143 363.0
DYD1_k127_5248384_3 LemA family - - - 0.00000000000000000000000000000000000000000000000007841 189.0
DYD1_k127_5248384_4 conserved protein (some members contain a von Willebrand factor type A (vWA) domain) - - - 0.0000000000000000000000000000000000000000000005422 179.0
DYD1_k127_5255435_0 Electron transfer flavoprotein-ubiquinone oxidoreductase K00311 - 1.5.5.1 2.483e-259 808.0
DYD1_k127_5255435_1 TIGRFAM type VI secretion system Vgr family protein K11904 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001487 507.0
DYD1_k127_5255435_2 Amidohydrolase family K06015 - 3.5.1.81 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000002459 295.0
DYD1_k127_5255435_3 Adenylate cyclase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000226 301.0
DYD1_k127_5255435_4 DnaK suppressor protein - - - 0.00000000000000000000000000000000006653 137.0
DYD1_k127_5255435_5 electron transfer flavoprotein beta subunit K03521 - - 0.00000000000000000000134 94.0
DYD1_k127_5256304_0 Male sterility protein K08678 - 4.1.1.35 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005404 498.0
DYD1_k127_5256304_1 UDP-glucose 4-epimerase K01784 - 5.1.3.2 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003076 446.0
DYD1_k127_5316582_0 Belongs to the thiolase family K00626 - 2.3.1.9 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001565 587.0
DYD1_k127_5316582_1 Phenylacetic acid catabolic protein K02609 - 1.14.13.149 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003163 509.0
DYD1_k127_5316582_2 Phenylacetate-CoA oxygenase, PaaI subunit K02611 GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006082,GO:0006725,GO:0006805,GO:0008150,GO:0008152,GO:0009056,GO:0009404,GO:0009407,GO:0009410,GO:0009636,GO:0009850,GO:0009852,GO:0009987,GO:0010124,GO:0010817,GO:0016054,GO:0019439,GO:0019748,GO:0019752,GO:0032787,GO:0042178,GO:0042221,GO:0042445,GO:0042447,GO:0042537,GO:0043436,GO:0044237,GO:0044248,GO:0044281,GO:0044282,GO:0044424,GO:0044444,GO:0044464,GO:0046395,GO:0050896,GO:0051716,GO:0065007,GO:0065008,GO:0070887,GO:0071466,GO:0071704,GO:0072329,GO:0098754,GO:1901360,GO:1901361,GO:1901575 1.14.13.149 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009083 320.0
DYD1_k127_5316582_3 Phenylacetate-CoA oxygenase K02610 GO:0006082,GO:0006725,GO:0006805,GO:0008150,GO:0008152,GO:0009056,GO:0009404,GO:0009407,GO:0009410,GO:0009636,GO:0009850,GO:0009852,GO:0009987,GO:0010124,GO:0010817,GO:0016054,GO:0019439,GO:0019748,GO:0019752,GO:0032787,GO:0042178,GO:0042221,GO:0042445,GO:0042447,GO:0042537,GO:0043436,GO:0044237,GO:0044248,GO:0044281,GO:0044282,GO:0046395,GO:0050896,GO:0051716,GO:0065007,GO:0065008,GO:0070887,GO:0071466,GO:0071704,GO:0072329,GO:0098754,GO:1901360,GO:1901361,GO:1901575 - 0.000000000000000000000000000000000000007354 146.0
DYD1_k127_5316582_4 Iron-sulfur cluster assembly protein K02612 - - 0.000000000000000000000000000000000001424 146.0
DYD1_k127_5325020_0 AbgT putative transporter family K12942 - - 1.004e-224 706.0
DYD1_k127_5325020_1 N-Acyl-D-aspartate D-glutamate deacylase K01465 - 3.5.2.3 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004989 396.0
DYD1_k127_5325020_2 Domain of unknown function (DUF4143) K07133 - - 0.00000000000000000000000000000000000000000000000000000000000000000000002131 244.0
DYD1_k127_5325020_3 Legume lectin domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000008397 249.0
DYD1_k127_5325020_4 metal-dependent enzyme of the double-stranded beta helix superfamily - - - 0.000000000000000000000000000000000000000000000000000001926 196.0
DYD1_k127_5325020_5 acetoin utilization protein - - - 0.0000000000000000000000000000000000001828 145.0
DYD1_k127_5325020_6 Methyltransferase domain - - - 0.0000000000000000000000000000000004221 140.0
DYD1_k127_5325020_7 - - - - 0.000000000000000005292 86.0
DYD1_k127_5333687_0 Belongs to the sodium solute symporter (SSF) (TC 2.A.21) family K14393 - - 1.743e-292 907.0
DYD1_k127_5333687_1 Peptidase family M3 K01392 - 3.4.24.15 3.562e-200 646.0
DYD1_k127_5333687_2 Oxidoreductase molybdopterin binding domain K07147 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002606 411.0
DYD1_k127_5333687_3 Alpha/beta hydrolase family K01563 - 3.8.1.5 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001486 376.0
DYD1_k127_5333687_4 Ferric reductase like transmembrane component - - - 0.00000000000000000000000000000000000000000000000000000000000004287 224.0
DYD1_k127_5333687_5 Membrane - - - 0.000000000000000000000000000001375 123.0
DYD1_k127_5341412_0 PFAM PhoH family protein K06217 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006619 432.0
DYD1_k127_5341412_1 Mg2 and Co2 transporter CorC K06189 GO:0001897,GO:0001906,GO:0001907,GO:0005575,GO:0005623,GO:0005886,GO:0008150,GO:0009405,GO:0009987,GO:0016020,GO:0019835,GO:0019836,GO:0031640,GO:0035821,GO:0044003,GO:0044004,GO:0044179,GO:0044364,GO:0044403,GO:0044419,GO:0044464,GO:0044764,GO:0051701,GO:0051704,GO:0051715,GO:0051801,GO:0051817,GO:0051818,GO:0051883,GO:0052331,GO:0071944 - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000001701 292.0
DYD1_k127_5341412_2 Domain of unknown function (DUF4105) - - - 0.00000000000000000000000000000000000000000000000000000000000001238 230.0
DYD1_k127_5341412_3 Single strand-specific metallo-endoribonuclease involved in late-stage 70S ribosome quality control and in maturation of the 3' terminus of the 16S rRNA K07042 - - 0.0000000000000000000000000000000000000000005283 162.0
DYD1_k127_5341412_4 Catalyzes the methylthiolation of N6- (dimethylallyl)adenosine (i(6)A), leading to the formation of 2- methylthio-N6-(dimethylallyl)adenosine (ms(2)i(6)A) at position 37 in tRNAs that read codons beginning with uridine K06168 - 2.8.4.3 0.000000000000000000000000000000000000000006963 156.0
DYD1_k127_5371799_0 FeS assembly protein SufB K09014 - - 1.914e-254 791.0
DYD1_k127_5371799_1 Part of SUF system involved in inserting iron-sulfur clusters into proteins K09013 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002093 398.0
DYD1_k127_5371799_2 Phosphotransferase K07102 - 2.7.1.221 0.000000000000000000000000000000000000000000000000000000000000000000000000000000004755 282.0
DYD1_k127_5371799_3 COG1208 Nucleoside-diphosphate-sugar pyrophosphorylase involved in lipopolysaccharide biosynthesis translation initiation factor 2B, gamma epsilon subunits (eIF-2Bgamma eIF-2Bepsilon) K00966,K00992 GO:0000166,GO:0000270,GO:0000287,GO:0001882,GO:0001884,GO:0002134,GO:0003674,GO:0003824,GO:0005488,GO:0006022,GO:0006040,GO:0006082,GO:0006807,GO:0008150,GO:0008152,GO:0009254,GO:0009987,GO:0016740,GO:0016772,GO:0016779,GO:0019103,GO:0019752,GO:0030203,GO:0032549,GO:0032551,GO:0032553,GO:0032557,GO:0036094,GO:0043167,GO:0043168,GO:0043169,GO:0043170,GO:0043436,GO:0044237,GO:0044281,GO:0046872,GO:0070569,GO:0071704,GO:0097159,GO:0097172,GO:0097367,GO:1901135,GO:1901265,GO:1901363,GO:1901564 2.7.7.13,2.7.7.99 0.00000000000000000000000000000000000000000000000000000000000000000000002391 248.0
DYD1_k127_5371799_4 abc transporter, permease K09015 - - 0.000000000000000000000000000000000000000000000000000000000000000000003247 254.0
DYD1_k127_5371799_5 transcriptional regulator - - - 0.000000000000000000000000000000000002064 146.0
DYD1_k127_5417617_0 4Fe-4S dicluster domain K17723 - 1.3.1.1 1.586e-214 678.0
DYD1_k127_5417617_1 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster K17722 - 1.3.1.1 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006488 514.0
DYD1_k127_5417617_2 PFAM aminotransferase class I and II, regulatory protein GntR HTH - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001549 496.0
DYD1_k127_5417617_3 EamA-like transporter family - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000003057 289.0
DYD1_k127_5417617_4 cAMP biosynthetic process K03641,K08282,K12132 - 2.7.11.1 0.000000000000000000000000000000000000000000000000000000000003194 229.0
DYD1_k127_5417617_5 - - - - 0.000000000000000000000000000000000000000000000002742 193.0
DYD1_k127_5417617_6 lactoylglutathione lyase activity - - - 0.000000000000000000000000000000000000000000003611 169.0
DYD1_k127_5424100_0 COG1680 Beta-lactamase class C and other penicillin binding proteins - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004812 441.0
DYD1_k127_5424100_1 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase K00020,K00042 - 1.1.1.31,1.1.1.60 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003148 399.0
DYD1_k127_5424100_2 Berberine and berberine like - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002829 353.0
DYD1_k127_5424100_3 PFAM Succinylglutamate desuccinylase Aspartoacylase K06987 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000004821 268.0
DYD1_k127_5424100_4 Involved in the glycolate utilization. Catalyzes the condensation and subsequent hydrolysis of acetyl-coenzyme A (acetyl-CoA) and glyoxylate to form malate and CoA K01638 - 2.3.3.9 0.0000000000000000000000000002309 120.0
DYD1_k127_5424175_0 RimK-like ATP-grasp domain - - - 2.627e-216 687.0
DYD1_k127_5424175_1 Peptidase family M49 - - - 1.907e-196 619.0
DYD1_k127_5424175_2 M42 glutamyl aminopeptidase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001477 482.0
DYD1_k127_5424175_3 Glutamine amidotransferase class-I K01951 - 6.3.5.2 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000003971 300.0
DYD1_k127_5424175_4 Asparagine synthase, glutamine-hydrolyzing K01953 - 6.3.5.4 0.0000000000000000000000000000000000000000000001242 169.0
DYD1_k127_5424175_5 Adenylate cyclase - - - 0.0000000000000000000000000000003907 141.0
DYD1_k127_5424175_6 - - - - 0.0000000004406 70.0
DYD1_k127_5424175_7 - - - - 0.000000000965 70.0
DYD1_k127_5426548_0 Involved in the TCA cycle. Catalyzes the stereospecific interconversion of fumarate to L-malate K01679 GO:0003674,GO:0003824,GO:0004333,GO:0006082,GO:0006091,GO:0006099,GO:0006101,GO:0006106,GO:0006108,GO:0006950,GO:0006979,GO:0008150,GO:0008152,GO:0009060,GO:0009987,GO:0015980,GO:0016829,GO:0016835,GO:0016836,GO:0016999,GO:0017144,GO:0019752,GO:0043436,GO:0043648,GO:0044237,GO:0044238,GO:0044281,GO:0045333,GO:0050896,GO:0055114,GO:0071704,GO:0072350 4.2.1.2 5.804e-196 621.0
DYD1_k127_5426548_1 Belongs to the lyase 1 family. Adenylosuccinate lyase subfamily K01756 - 4.3.2.2 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001666 578.0
DYD1_k127_5426548_2 Dehydrogenase E1 component K00164 - 1.2.4.2 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001476 536.0
DYD1_k127_5428292_0 PUA-like domain K00958 - 2.7.7.4 1.033e-256 802.0
DYD1_k127_5428292_1 Belongs to the sodium solute symporter (SSF) (TC 2.A.21) family K11928 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003234 448.0
DYD1_k127_5428292_2 abc transporter atp-binding protein K01990 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004411 392.0
DYD1_k127_5428292_3 GntR family transcriptional regulator K07979 - - 0.0000000000000000000000000000000000000000000009739 168.0
DYD1_k127_5428292_4 - K01992 - - 0.0000000000000000000000000000000000008337 151.0
DYD1_k127_5428292_5 Domain amino terminal to FKBP-type peptidyl-prolyl isomerase - - - 0.000000000000000000000000000000000001875 143.0
DYD1_k127_5441314_0 Modifies, by uridylylation and deuridylylation, the PII regulatory proteins (GlnB and homologs), in response to the nitrogen status of the cell that GlnD senses through the glutamine level. Under low glutamine levels, catalyzes the conversion of the PII proteins and UTP to PII-UMP and PPi, while under higher glutamine levels, GlnD hydrolyzes PII-UMP to PII and UMP (deuridylylation). Thus, controls uridylylation state and activity of the PII proteins, and plays an important role in the regulation of nitrogen K00990 GO:0003674,GO:0003824,GO:0006082,GO:0006464,GO:0006520,GO:0006541,GO:0006542,GO:0006807,GO:0008150,GO:0008152,GO:0008652,GO:0008773,GO:0009058,GO:0009064,GO:0009084,GO:0009987,GO:0016053,GO:0016740,GO:0016772,GO:0016779,GO:0019538,GO:0019752,GO:0036211,GO:0043170,GO:0043412,GO:0043436,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044281,GO:0044283,GO:0046394,GO:0070569,GO:0071704,GO:0140096,GO:1901564,GO:1901566,GO:1901576,GO:1901605,GO:1901607 2.7.7.59 1.106e-222 722.0
DYD1_k127_5441314_1 AlkA N-terminal domain K13529,K13530 - 3.2.2.21 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004504 475.0
DYD1_k127_5441314_10 Calcineurin-like phosphoesterase superfamily domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001742 360.0
DYD1_k127_5441314_11 PFAM FAD linked oxidase domain protein - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002222 363.0
DYD1_k127_5441314_12 PFAM SPFH domain Band 7 family - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003139 347.0
DYD1_k127_5441314_13 Zn_pept - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003908 362.0
DYD1_k127_5441314_14 protease with the C-terminal PDZ domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001838 342.0
DYD1_k127_5441314_15 PFAM RmuC family K09760 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002693 315.0
DYD1_k127_5441314_16 MazG family K02499,K04765 GO:0003674,GO:0003824,GO:0006139,GO:0006163,GO:0006195,GO:0006203,GO:0006213,GO:0006220,GO:0006244,GO:0006725,GO:0006753,GO:0006793,GO:0006796,GO:0006807,GO:0006950,GO:0007154,GO:0008150,GO:0008152,GO:0009056,GO:0009058,GO:0009116,GO:0009117,GO:0009119,GO:0009141,GO:0009143,GO:0009144,GO:0009146,GO:0009147,GO:0009149,GO:0009151,GO:0009155,GO:0009164,GO:0009166,GO:0009199,GO:0009200,GO:0009203,GO:0009204,GO:0009208,GO:0009210,GO:0009211,GO:0009213,GO:0009215,GO:0009217,GO:0009218,GO:0009219,GO:0009222,GO:0009223,GO:0009259,GO:0009261,GO:0009262,GO:0009264,GO:0009267,GO:0009394,GO:0009605,GO:0009987,GO:0009991,GO:0016462,GO:0016787,GO:0016817,GO:0016818,GO:0018130,GO:0019438,GO:0019439,GO:0019637,GO:0019692,GO:0019693,GO:0031667,GO:0031668,GO:0031669,GO:0033554,GO:0034404,GO:0034641,GO:0034654,GO:0034655,GO:0034656,GO:0042454,GO:0042594,GO:0044237,GO:0044238,GO:0044248,GO:0044249,GO:0044270,GO:0044271,GO:0044281,GO:0044282,GO:0044283,GO:0046046,GO:0046047,GO:0046051,GO:0046052,GO:0046060,GO:0046061,GO:0046070,GO:0046075,GO:0046076,GO:0046080,GO:0046081,GO:0046131,GO:0046133,GO:0046135,GO:0046386,GO:0046434,GO:0046483,GO:0046700,GO:0047429,GO:0050896,GO:0051716,GO:0055086,GO:0071496,GO:0071704,GO:0072521,GO:0072523,GO:0072527,GO:0072529,GO:1901135,GO:1901136,GO:1901292,GO:1901360,GO:1901361,GO:1901362,GO:1901564,GO:1901565,GO:1901575,GO:1901576,GO:1901657,GO:1901658 3.6.1.9 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000004338 301.0
DYD1_k127_5441314_17 Methylates the class 1 translation termination release factors RF1 PrfA and RF2 PrfB on the glutamine residue of the universally conserved GGQ motif K02493 GO:0003674,GO:0003824,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006464,GO:0006479,GO:0006807,GO:0008150,GO:0008152,GO:0008168,GO:0008170,GO:0008213,GO:0008276,GO:0008757,GO:0009987,GO:0016740,GO:0016741,GO:0018364,GO:0019538,GO:0032259,GO:0036009,GO:0036211,GO:0043170,GO:0043412,GO:0043414,GO:0044237,GO:0044238,GO:0044260,GO:0044267,GO:0044424,GO:0044444,GO:0044464,GO:0071704,GO:0140096,GO:1901564 2.1.1.297 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000007498 299.0
DYD1_k127_5441314_19 PFAM von Willebrand factor type A K01337 - 3.4.21.50 0.0000000000000000000000000000000000000000000000000000000000000000000000000001773 288.0
DYD1_k127_5441314_2 NfeD-like C-terminal, partner-binding K07403 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003328 451.0
DYD1_k127_5441314_20 Predicted membrane protein (DUF2157) - - - 0.00000000000000000000000000000000000000000000000000000000000000000000005227 252.0
DYD1_k127_5441314_21 6-O-methylguanine DNA methyltransferase, DNA binding domain K00567 - 2.1.1.63 0.00000000000000000000000000000000000000000000000001947 184.0
DYD1_k127_5441314_22 - - - - 0.000000000000000000000000003443 115.0
DYD1_k127_5441314_23 Belongs to the ArsC family K00537 GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0044424,GO:0044444,GO:0044464 1.20.4.1 0.000000000000000000001248 102.0
DYD1_k127_5441314_24 - - - - 0.0000000000000002364 86.0
DYD1_k127_5441314_3 Converts alpha-N-acetylneuranimic acid (Neu5Ac) to the beta-anomer, accelerating the equilibrium between the alpha- and beta-anomers. Probably facilitates sialidase-negative bacteria to compete sucessfully for limited amounts of extracellular Neu5Ac, which is likely taken up in the beta-anomer. In addition, the rapid removal of sialic acid from solution might be advantageous to the bacterium to damp down host responses - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003083 463.0
DYD1_k127_5441314_4 Belongs to the peptidase M48B family K03799 GO:0003674,GO:0003824,GO:0004175,GO:0004222,GO:0005488,GO:0005575,GO:0005623,GO:0005886,GO:0006508,GO:0006807,GO:0006950,GO:0008150,GO:0008152,GO:0008233,GO:0008237,GO:0008270,GO:0009266,GO:0009408,GO:0009628,GO:0016020,GO:0016021,GO:0016787,GO:0019538,GO:0031224,GO:0043167,GO:0043169,GO:0043170,GO:0044238,GO:0044425,GO:0044464,GO:0046872,GO:0046914,GO:0050896,GO:0070011,GO:0071704,GO:0071944,GO:0140096,GO:1901564 - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004306 415.0
DYD1_k127_5441314_5 cystathione gamma lyase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001611 428.0
DYD1_k127_5441314_6 alcohol dehydrogenase K13953 - 1.1.1.1 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004909 412.0
DYD1_k127_5441314_7 Catalyzes the hydrolysis of N-succinyl-L,L- diaminopimelic acid (SDAP), forming succinate and LL-2,6- diaminoheptanedioate (DAP), an intermediate involved in the bacterial biosynthesis of lysine and meso-diaminopimelic acid, an essential component of bacterial cell walls K01439 - 3.5.1.18 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001126 414.0
DYD1_k127_5441314_8 Metallopeptidase family M24 K01265 - 3.4.11.18 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004572 402.0
DYD1_k127_5441314_9 Belongs to the transferase hexapeptide repeat family K00674 - 2.3.1.117 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001013 377.0
DYD1_k127_5443558_0 Acts as a processive, ATP-dependent zinc metallopeptidase for both cytoplasmic and membrane proteins. Plays a role in the quality control of integral membrane proteins K03798 - - 8.936e-297 922.0
DYD1_k127_5443558_1 Component of the ubiquinol-cytochrome c reductase complex (complex III or cytochrome b-c1 complex), which is a respiratory chain that generates an electrochemical potential coupled to ATP synthesis K00412 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009774 586.0
DYD1_k127_5443558_10 SNARE associated Golgi protein - - - 0.00000000000000000000000000000000000000000000000000000000000000000001431 238.0
DYD1_k127_5443558_11 Component of the ubiquinol-cytochrome c reductase complex (complex III or cytochrome b-c1 complex), which is a respiratory chain that generates an electrochemical potential coupled to ATP synthesis K00411 - 1.10.2.2 0.0000000000000000000000000000000000000000000000000000000000000000006541 233.0
DYD1_k127_5443558_12 membrane K06194 - - 0.000000000000000000000000000000000000000000000000000000000000009629 231.0
DYD1_k127_5443558_13 PFAM Glutathione S-transferase K03599 - - 0.00000000000000000000000000000000000000000000000000000000000004141 221.0
DYD1_k127_5443558_14 stringent starvation protein b K03600 - - 0.000000000000000000000000000000000000000237 153.0
DYD1_k127_5443558_15 Protein of unknown function (DUF498/DUF598) - - - 0.0000000000000000000000207 106.0
DYD1_k127_5443558_16 RNA-binding protein K07574 - - 0.0000000000000000001145 106.0
DYD1_k127_5443558_17 Protein of unknown function (DUF3301) - - - 0.0001373 49.0
DYD1_k127_5443558_2 Catalyzes the conversion of glucosamine-6-phosphate to glucosamine-1-phosphate K03431 - 5.4.2.10 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001778 574.0
DYD1_k127_5443558_3 Nucleotidase that shows phosphatase activity on nucleoside 5'-monophosphates K03787 GO:0003674,GO:0005488,GO:0005515,GO:0042802 3.1.3.5 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007283 358.0
DYD1_k127_5443558_4 Catalyzes the condensation of para-aminobenzoate (pABA) with 6-hydroxymethyl-7,8-dihydropterin diphosphate (DHPt-PP) to form 7,8-dihydropteroate (H2Pte), the immediate precursor of folate derivatives K00796 - 2.5.1.15 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003337 353.0
DYD1_k127_5443558_5 TIGRFAM RNA polymerase sigma factor RpoS K03087 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003932 315.0
DYD1_k127_5443558_6 COG0265 Trypsin-like serine proteases, typically periplasmic, contain C-terminal PDZ domain K04691,K04772 GO:0003674,GO:0003824,GO:0004175,GO:0004252,GO:0005488,GO:0005515,GO:0005575,GO:0005623,GO:0005886,GO:0005887,GO:0006508,GO:0006807,GO:0006950,GO:0008150,GO:0008152,GO:0008233,GO:0008236,GO:0009897,GO:0009986,GO:0009987,GO:0010033,GO:0016020,GO:0016021,GO:0016787,GO:0017171,GO:0019538,GO:0030288,GO:0030313,GO:0031224,GO:0031226,GO:0031233,GO:0031975,GO:0033554,GO:0035966,GO:0035967,GO:0042221,GO:0042597,GO:0042802,GO:0043170,GO:0044238,GO:0044425,GO:0044459,GO:0044464,GO:0050896,GO:0051716,GO:0051788,GO:0070011,GO:0070887,GO:0071218,GO:0071310,GO:0071575,GO:0071704,GO:0071944,GO:0098552,GO:0140096,GO:1901564 - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000007361 282.0
DYD1_k127_5443558_7 Specifically methylates the uridine in position 2552 of 23S rRNA at the 2'-O position of the ribose in the fully assembled 50S ribosomal subunit K02427 - 2.1.1.166 0.0000000000000000000000000000000000000000000000000000000000000000000000000000009001 267.0
DYD1_k127_5443558_8 Cytochrome C1 family K00413 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000004703 265.0
DYD1_k127_5443558_9 Catalyzes the methyl esterification of L-isoaspartyl residues in peptides and proteins that result from spontaneous decomposition of normal L-aspartyl and L-asparaginyl residues. It plays a role in the repair and or degradation of damaged proteins K00573 GO:0003674,GO:0003824,GO:0004719,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006464,GO:0006479,GO:0006807,GO:0008150,GO:0008152,GO:0008168,GO:0008171,GO:0008213,GO:0008276,GO:0008757,GO:0009987,GO:0010340,GO:0016740,GO:0016741,GO:0019538,GO:0032259,GO:0036211,GO:0043170,GO:0043412,GO:0043414,GO:0044237,GO:0044238,GO:0044260,GO:0044267,GO:0044424,GO:0044464,GO:0051998,GO:0071704,GO:0140096,GO:1901564 2.1.1.77 0.00000000000000000000000000000000000000000000000000000000000000000000001413 256.0
DYD1_k127_5468331_0 Alpha/beta hydrolase family - - - 0.0000000000000000000000000000000000000000000000000006609 195.0
DYD1_k127_5468331_1 - - - - 0.00000000000000000000000000000000000000000000007878 180.0
DYD1_k127_5468331_2 - - - - 0.00000000000000000000136 107.0
DYD1_k127_5468331_3 sister chromatid segregation - - - 0.00000087 61.0
DYD1_k127_5517863_0 PFAM Peptidase family M20 M25 M40 K01436 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004739 515.0
DYD1_k127_5517863_1 COG0209 Ribonucleotide reductase, alpha subunit - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000002564 300.0
DYD1_k127_5517863_2 Glutathione S-transferase, N-terminal domain - - - 0.00000000000000000000000000000000000000000000000000000000000000009783 233.0
DYD1_k127_5517863_3 NERD domain protein - - - 0.0000000000000000000007816 106.0
DYD1_k127_5517863_4 Protein of unknown function (DUF1282) - - - 0.0000000005158 71.0
DYD1_k127_5524341_0 The transhydrogenation between NADH and NADP is coupled to respiration and ATP hydrolysis and functions as a proton pump across the membrane K00324 - 1.6.1.2 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008938 409.0
DYD1_k127_5524341_1 Glucose / Sorbosone dehydrogenase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001515 368.0
DYD1_k127_5524341_2 The transhydrogenation between NADH and NADP is coupled to respiration and ATP hydrolysis and functions as a proton pump across the membrane K00325 - 1.6.1.2 0.00000000000000000000000000000000000000000000000000000002221 206.0
DYD1_k127_5524341_3 4TM region of pyridine nucleotide transhydrogenase, mitoch K00324 - 1.6.1.2 0.000000000000000000000000000000000000000000002931 166.0
DYD1_k127_5560919_0 Sulfatase-modifying factor enzyme 1 - - - 1.01e-260 820.0
DYD1_k127_5560919_1 - - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001059 490.0
DYD1_k127_5560919_2 COG0811 Biopolymer transport proteins - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005431 381.0
DYD1_k127_5560919_3 Tetratricopeptide repeat - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000193 361.0
DYD1_k127_5560919_4 - - - - 0.00000000000000000000000000000000000000000000000007802 195.0
DYD1_k127_5560919_6 - - - - 0.00000000000000002475 83.0
DYD1_k127_5560919_7 Cysteine-rich CPXCG - - - 0.0000000000002679 71.0
DYD1_k127_5564822_0 Bacterial extracellular solute-binding proteins, family 5 Middle - - - 8.818e-199 639.0
DYD1_k127_5564822_1 PFAM peptidase M3A and M3B, thimet oligopeptidase F K01414 - 3.4.24.70 1.162e-197 639.0
DYD1_k127_5564822_10 ABC transporter K02065 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001181 307.0
DYD1_k127_5564822_11 NmrA-like family K00091 - 1.1.1.219 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000006387 296.0
DYD1_k127_5564822_12 ABC-type transport system involved in resistance to organic solvents permease component K02066 - - 0.000000000000000000000000000000000000000000000000000000000000000001016 235.0
DYD1_k127_5564822_13 lipoprotein K04754 - - 0.00000000000000000000000000000000000000000000000000007102 200.0
DYD1_k127_5564822_14 - - - - 0.00000000000000000000000000000000000000000000004897 186.0
DYD1_k127_5564822_15 ABC-type transport system involved in resistance to organic solvents, periplasmic component K02067 - - 0.000000000000000000000000000000000000000000001642 169.0
DYD1_k127_5564822_16 Protein of unknown function (DUF1232) - - - 0.00000000000000000000000000000000000000000000209 170.0
DYD1_k127_5564822_17 - - - - 0.000000000000000000000000000000000000004574 161.0
DYD1_k127_5564822_18 Recycling of diacylglycerol produced during the turnover of membrane phospholipid K00901 - 2.7.1.107 0.000000000000000000000000000000000000004661 149.0
DYD1_k127_5564822_19 Organic solvent ABC transporter K07323 - - 0.0000000000000000000000000000000003001 140.0
DYD1_k127_5564822_2 signal peptide peptidase K04773 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008849 487.0
DYD1_k127_5564822_20 PspA/IM30 family K03969 - - 0.00000000000000000000000000000783 128.0
DYD1_k127_5564822_21 - - - - 0.000000000000000000001978 98.0
DYD1_k127_5564822_22 Protein of unknown function (DUF3667) - - - 0.00000000000001898 78.0
DYD1_k127_5564822_23 response to antibiotic K07122 - - 0.00002025 51.0
DYD1_k127_5564822_24 META domain - - - 0.00002129 53.0
DYD1_k127_5564822_3 Belongs to the ABC transporter superfamily K02031,K02032 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008629 440.0
DYD1_k127_5564822_4 Binding-protein-dependent transport system inner membrane component - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007346 387.0
DYD1_k127_5564822_5 PFAM Endonuclease Exonuclease phosphatase K01142 - 3.1.11.2 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002381 376.0
DYD1_k127_5564822_6 multidrug K03327 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008807 389.0
DYD1_k127_5564822_7 Glutaredoxin K07390 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001143 362.0
DYD1_k127_5564822_8 Binding-protein-dependent transport system inner membrane component - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001039 341.0
DYD1_k127_5564822_9 amino acid - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001159 341.0
DYD1_k127_5567997_0 Required for chromosome condensation and partitioning K03529 - - 3.939e-313 996.0
DYD1_k127_5567997_1 DNA ligase that catalyzes the formation of phosphodiester linkages between 5'-phosphoryl and 3'-hydroxyl groups in double-stranded DNA using NAD as a coenzyme and as the energy source for the reaction. It is essential for DNA replication and repair of damaged DNA K01972 - 6.5.1.2 3.554e-238 754.0
DYD1_k127_5567997_2 Participates in chromosomal partition during cell division. May act via the formation of a condensin-like complex containing Smc and ScpB that pull DNA away from mid-cell into both cell halves K05896 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006355 331.0
DYD1_k127_5567997_3 Catalyzes the NADPH-dependent reduction of 7-cyano-7- deazaguanine (preQ0) to 7-aminomethyl-7-deazaguanine (preQ1) K09457 - 1.7.1.13 0.00000000000000000000000000000000000000000000000000000000001324 209.0
DYD1_k127_5567997_4 Belongs to the SUA5 family - - - 0.00000000000000000000000000000000000000000000000000008 194.0
DYD1_k127_5567997_5 Essential cell division protein that stabilizes the FtsZ protofilaments by cross-linking them and that serves as a cytoplasmic membrane anchor for the Z ring. Also required for the recruitment to the septal ring of downstream cell division proteins K03528 - - 0.000000000000000000000000000000000000001929 156.0
DYD1_k127_5567997_6 protein conserved in bacteria K05527,K09780 GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0044424,GO:0044444,GO:0044464 - 0.00000000000000000000000000000001491 130.0
DYD1_k127_5567997_7 Belongs to the BolA IbaG family K05527 - - 0.0000000000000000000000002181 112.0
DYD1_k127_5588136_0 Endoribonuclease that plays a central role in RNA processing and decay. Required for the maturation of 5S and 16S rRNAs and the majority of tRNAs. Also involved in the degradation of most mRNAs K08300 - 3.1.26.12 2.286e-210 683.0
DYD1_k127_5588136_1 lipoprotein releasing system, transmembrane protein, LolC E family K09808 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001061 475.0
DYD1_k127_5588136_10 Uncharacterized protein family UPF0016 - - - 0.0000000000000000000000001814 108.0
DYD1_k127_5588136_12 relative of glutathione S-transferase, MAPEG superfamily K07136 GO:0005575,GO:0005623,GO:0005886,GO:0016020,GO:0044464,GO:0071944 - 0.000000000000000002612 91.0
DYD1_k127_5588136_13 Calx-beta domain - - - 0.00000001018 67.0
DYD1_k127_5588136_2 Succinylglutamate desuccinylase / Aspartoacylase family - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000797 385.0
DYD1_k127_5588136_3 DNA internalization-related competence protein ComEC Rec2 K02238 GO:0005575,GO:0005623,GO:0005886,GO:0016020,GO:0044464,GO:0071944 - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006383 321.0
DYD1_k127_5588136_4 Responsible for synthesis of pseudouridine from uracil K06179 - 5.4.99.24 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000001699 290.0
DYD1_k127_5588136_5 Part of the ABC transporter complex LolCDE involved in the translocation of K09810 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000001464 284.0
DYD1_k127_5588136_6 In Escherichia coli the protein UvrY is part of a two-component system along with BarA that is needed for efficient switching between glycolytic and gluconeogenic carbon sources possibly by regulating the Csr system - - - 0.00000000000000000000000000000000000000000000000000000000000001764 221.0
DYD1_k127_5588136_7 Glutathione-dependent formaldehyde-activating enzyme - - - 0.000000000000000000000000000000000000000000000006829 175.0
DYD1_k127_5588136_8 Uncharacterized ACR, COG1993 K06199,K09137 - - 0.00000000000000000000000000000000000000000000004326 173.0
DYD1_k127_5588136_9 CrcB-like protein, Camphor Resistance (CrcB) K06199 GO:0003674,GO:0005215,GO:0005575,GO:0005623,GO:0005886,GO:0005887,GO:0006810,GO:0006811,GO:0006820,GO:0008150,GO:0008509,GO:0015075,GO:0015103,GO:0015318,GO:0015698,GO:0016020,GO:0016021,GO:0022857,GO:0031224,GO:0031226,GO:0034220,GO:0044425,GO:0044459,GO:0044464,GO:0051179,GO:0051234,GO:0055085,GO:0071944,GO:0098656,GO:0098660,GO:0098661,GO:1903424,GO:1903425 - 0.0000000000000000000000000001983 119.0
DYD1_k127_5603173_0 Adenylate cyclase - - - 0.0000000000000000000000000000000000000000000000003161 195.0
DYD1_k127_5603173_1 D-arabinono-1,4-lactone oxidase K00594 - 1.1.3.41 0.00000000002483 69.0
DYD1_k127_5649051_0 ABC transporter transmembrane region K06147,K11085 - - 4.364e-201 642.0
DYD1_k127_5649051_1 Bacterial protein of unknown function (DUF885) - - - 0.0000000000000000000000000000000000000000000000000000000000001216 218.0
DYD1_k127_5653286_0 Part of the outer membrane protein assembly complex, which is involved in assembly and insertion of beta-barrel proteins into the outer membrane K07277 - - 1.114e-227 731.0
DYD1_k127_5653286_1 zinc metalloprotease K11749 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003008 430.0
DYD1_k127_5653286_10 Responsible for the release of ribosomes from messenger RNA at the termination of protein biosynthesis. May increase the efficiency of translation by recycling ribosomes from one round of translation to another K02838 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000008694 250.0
DYD1_k127_5653286_11 Involved in unsaturated fatty acids biosynthesis. Catalyzes the dehydration of short chain beta-hydroxyacyl-ACPs and long chain saturated and unsaturated beta-hydroxyacyl-ACPs K02372 - 4.2.1.59 0.000000000000000000000000000000000000000000000008204 177.0
DYD1_k127_5653286_12 ribonuclease BN K07058 - - 0.00000000000000000000000000000000000000000001045 174.0
DYD1_k127_5653286_13 Belongs to the CDS family K00981 - 2.7.7.41 0.0000000000000000000000000000000000000000001551 173.0
DYD1_k127_5653286_14 protein conserved in bacteria containing a divergent form of TPR repeats - - - 0.00000000000000000000000000000000000000005408 163.0
DYD1_k127_5653286_15 PFAM Outer membrane K06142 - - 0.000000000000000000003433 100.0
DYD1_k127_5653286_2 Catalyzes the NADP-dependent rearrangement and reduction of 1-deoxy-D-xylulose-5-phosphate (DXP) to 2-C-methyl-D-erythritol 4-phosphate (MEP) K00099 GO:0000166,GO:0003674,GO:0003824,GO:0005488,GO:0005515,GO:0006081,GO:0006082,GO:0006090,GO:0006629,GO:0006644,GO:0006720,GO:0006721,GO:0006793,GO:0006796,GO:0008150,GO:0008152,GO:0008299,GO:0008610,GO:0008654,GO:0009058,GO:0009240,GO:0009987,GO:0016114,GO:0016491,GO:0016614,GO:0016616,GO:0019288,GO:0019637,GO:0019682,GO:0019752,GO:0030145,GO:0030604,GO:0032787,GO:0036094,GO:0042802,GO:0043167,GO:0043168,GO:0043169,GO:0043436,GO:0044237,GO:0044238,GO:0044249,GO:0044255,GO:0044281,GO:0046490,GO:0046872,GO:0046914,GO:0048037,GO:0050661,GO:0050662,GO:0051483,GO:0051484,GO:0055114,GO:0070402,GO:0071704,GO:0090407,GO:0097159,GO:1901135,GO:1901265,GO:1901363,GO:1901576 1.1.1.267 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005001 415.0
DYD1_k127_5653286_3 Belongs to the universal ribosomal protein uS2 family K02967 GO:0003674,GO:0003735,GO:0005198,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0006412,GO:0006518,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0015935,GO:0019538,GO:0022626,GO:0022627,GO:0032991,GO:0034641,GO:0034645,GO:0043043,GO:0043170,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:0071704,GO:1901564,GO:1901566,GO:1901576,GO:1990904 - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001584 373.0
DYD1_k127_5653286_4 Condensation of UDP-2,3-diacylglucosamine and 2,3- diacylglucosamine-1-phosphate to form lipid A disaccharide, a precursor of lipid A, a phosphorylated glycolipid that anchors the lipopolysaccharide to the outer membrane of the cell K00748 GO:0003674,GO:0005488,GO:0005543,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005975,GO:0006629,GO:0006643,GO:0006644,GO:0006664,GO:0006793,GO:0006796,GO:0008150,GO:0008152,GO:0008289,GO:0008610,GO:0008654,GO:0009058,GO:0009245,GO:0009247,GO:0009311,GO:0009312,GO:0009987,GO:0016051,GO:0019637,GO:0043167,GO:0043168,GO:0044237,GO:0044238,GO:0044249,GO:0044255,GO:0044424,GO:0044444,GO:0044464,GO:0046467,GO:0046493,GO:0071704,GO:0090407,GO:1901135,GO:1901137,GO:1901269,GO:1901271,GO:1901576,GO:1903509 2.4.1.182 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003972 368.0
DYD1_k127_5653286_5 Catalyzes the N-acylation of UDP-3-O-acylglucosamine using 3-hydroxyacyl-ACP as the acyl donor. Is involved in the biosynthesis of lipid A, a phosphorylated glycolipid that anchors the lipopolysaccharide to the outer membrane of the cell K02536 - 2.3.1.191 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000476 355.0
DYD1_k127_5653286_6 Associates with the EF-Tu.GDP complex and induces the exchange of GDP to GTP. It remains bound to the aminoacyl-tRNA.EF- Tu.GTP complex up to the GTP hydrolysis stage on the ribosome K02357 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002933 340.0
DYD1_k127_5653286_7 Catalyzes the reversible phosphorylation of UMP to UDP K09903 - 2.7.4.22 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006379 336.0
DYD1_k127_5653286_8 Involved in the biosynthesis of lipid A, a phosphorylated glycolipid that anchors the lipopolysaccharide to the outer membrane of the cell K00677 - 2.3.1.129 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000004096 286.0
DYD1_k127_5653286_9 Catalyzes the sequential condensation of isopentenyl diphosphate (IPP) with (2E,6E)-farnesyl diphosphate (E,E-FPP) to yield (2Z,6Z,10Z,14Z,18Z,22Z,26Z,30Z,34E,38E)-undecaprenyl diphosphate (di-trans,octa-cis-UPP). UPP is the precursor of glycosyl carrier lipid in the biosynthesis of bacterial cell wall polysaccharide components such as peptidoglycan and lipopolysaccharide K00806 - 2.5.1.31 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000001867 281.0
DYD1_k127_5726700_0 The glycine cleavage system catalyzes the degradation of glycine K00605 - 2.1.2.10 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001844 422.0
DYD1_k127_5726700_1 cytochrome C family protein - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007006 344.0
DYD1_k127_5726700_2 Putative outer membrane beta-barrel porin, MtrB/PioB - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009691 325.0
DYD1_k127_5726700_3 The glycine cleavage system catalyzes the degradation of glycine. The H protein shuttles the methylamine group of glycine from the P protein to the T protein K02437 GO:0001505,GO:0003674,GO:0005488,GO:0005504,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006082,GO:0006520,GO:0006544,GO:0006546,GO:0006807,GO:0008150,GO:0008152,GO:0008289,GO:0009056,GO:0009063,GO:0009069,GO:0009071,GO:0009987,GO:0016054,GO:0017144,GO:0019464,GO:0019752,GO:0031405,GO:0031406,GO:0033293,GO:0036094,GO:0042133,GO:0042135,GO:0042737,GO:0043167,GO:0043168,GO:0043177,GO:0043436,GO:0044237,GO:0044238,GO:0044248,GO:0044281,GO:0044282,GO:0044424,GO:0044444,GO:0044464,GO:0046395,GO:0048037,GO:0050662,GO:0065007,GO:0065008,GO:0071704,GO:0097159,GO:1901363,GO:1901564,GO:1901565,GO:1901575,GO:1901605,GO:1901606,GO:1901681 - 0.00000000000000000000000000000000000000000000001283 174.0
DYD1_k127_5726700_4 Hydrolases of the alpha beta superfamily K06889,K07397 - - 0.00000000000000000000000000000000000000001532 158.0
DYD1_k127_5726700_5 PFAM Cytochrome C K17230 - - 0.00000000000000000000000004264 116.0
DYD1_k127_5802150_0 Part of the Sec protein translocase complex. Interacts with the SecYEG preprotein conducting channel. SecDF uses the proton motive force (PMF) to complete protein translocation after the ATP-dependent function of SecA K03072 - - 8.907e-206 656.0
DYD1_k127_5802150_1 Part of the Sec protein translocase complex. Interacts with the SecYEG preprotein conducting channel. SecDF uses the proton motive force (PMF) to complete protein translocation after the ATP-dependent function of SecA K03074 GO:0005575,GO:0005623,GO:0005886,GO:0005887,GO:0006810,GO:0008104,GO:0008150,GO:0015031,GO:0015833,GO:0016020,GO:0016021,GO:0031224,GO:0031226,GO:0033036,GO:0042886,GO:0044425,GO:0044459,GO:0044464,GO:0045184,GO:0051179,GO:0051234,GO:0071702,GO:0071705,GO:0071944 - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001439 357.0
DYD1_k127_5802150_2 Aspartyl/Asparaginyl beta-hydroxylase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000008559 287.0
DYD1_k127_5802150_3 Inositol monophosphatase K01092 GO:0000287,GO:0003674,GO:0003824,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005975,GO:0006020,GO:0006066,GO:0006793,GO:0006796,GO:0007154,GO:0007165,GO:0008150,GO:0008152,GO:0008934,GO:0009056,GO:0009987,GO:0016311,GO:0016787,GO:0016788,GO:0016791,GO:0019637,GO:0019751,GO:0023052,GO:0031403,GO:0031420,GO:0042578,GO:0043167,GO:0043169,GO:0043647,GO:0044237,GO:0044238,GO:0044262,GO:0044281,GO:0044282,GO:0044424,GO:0044444,GO:0044464,GO:0046164,GO:0046174,GO:0046434,GO:0046838,GO:0046855,GO:0046872,GO:0047954,GO:0050789,GO:0050794,GO:0050896,GO:0051716,GO:0052745,GO:0052834,GO:0065007,GO:0071545,GO:0071704,GO:1901575,GO:1901615,GO:1901616 3.1.3.25 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000002044 284.0
DYD1_k127_5802150_4 Catalyzes the formation of 2'O-methylated cytidine (Cm32) or 2'O-methylated uridine (Um32) at position 32 in tRNA K02533,K15396 - 2.1.1.200 0.000000000000000000000000000000000000000000000000000000000000000000000000009632 261.0
DYD1_k127_5802150_5 Flavin-nucleotide-binding protein K07005 - - 0.00000000000000000000000000000000000000000000000000000000002161 214.0
DYD1_k127_5802150_6 Preprotein translocase subunit YajC K03210 - - 0.000000000000000000000000000000000004162 141.0
DYD1_k127_5802150_7 Methyltransferase K07443 - - 0.000000000000000000000000971 108.0
DYD1_k127_5802150_8 Catalyzes the base-exchange of a guanine (G) residue with the queuine precursor 7-aminomethyl-7-deazaguanine (PreQ1) at position 34 (anticodon wobble position) in tRNAs with GU(N) anticodons (tRNA-Asp, -Asn, -His and -Tyr). Catalysis occurs through a double-displacement mechanism. The nucleophile active site attacks the C1' of nucleotide 34 to detach the guanine base from the RNA, forming a covalent enzyme-RNA intermediate. The proton acceptor active site deprotonates the incoming PreQ1, allowing a nucleophilic attack on the C1' of the ribose to form the product. After dissociation, two additional enzymatic reactions on the tRNA convert PreQ1 to queuine (Q), resulting in the hypermodified nucleoside queuosine (7-(((4,5-cis-dihydroxy-2- cyclopenten-1-yl)amino)methyl)-7-deazaguanosine) K00773 GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006139,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0008616,GO:0009058,GO:0009116,GO:0009119,GO:0009163,GO:0009987,GO:0018130,GO:0019438,GO:0034404,GO:0034641,GO:0034654,GO:0042455,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0044283,GO:0044424,GO:0044464,GO:0046116,GO:0046483,GO:0055086,GO:0071704,GO:1901135,GO:1901137,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576,GO:1901657,GO:1901659 2.4.2.29 0.000000000000000000002483 94.0
DYD1_k127_5809673_0 Catalyzes the addition and repair of the essential 3'- terminal CCA sequence in tRNAs without using a nucleic acid template. Adds these three nucleotides in the order of C, C, and A to the tRNA nucleotide-73, using CTP and ATP as substrates and producing inorganic pyrophosphate K00974 GO:0003674,GO:0003824,GO:0004652,GO:0004810,GO:0006139,GO:0006396,GO:0006399,GO:0006725,GO:0006807,GO:0008033,GO:0008150,GO:0008152,GO:0009987,GO:0010467,GO:0016070,GO:0016740,GO:0016772,GO:0016779,GO:0034470,GO:0034641,GO:0034660,GO:0043170,GO:0044237,GO:0044238,GO:0046483,GO:0070566,GO:0071704,GO:0090304,GO:1901360,GO:1990817 2.7.7.72 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006816 471.0
DYD1_k127_5809673_1 Lytic murein transglycosylase K08309 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003275 397.0
DYD1_k127_5809673_2 Putative S-adenosyl-L-methionine-dependent methyltransferase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003029 327.0
DYD1_k127_5809673_3 NAD-dependent epimerase dehydratase K00329,K00356 - 1.6.5.3,1.6.99.3 0.00000000000000000000000000000000000000000000000000000000000000000000000000000002847 278.0
DYD1_k127_5809673_4 COG1028 Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) K03793 - 1.5.1.33 0.000000000000000000000000000000000000000000000000000000000000000000000001866 253.0
DYD1_k127_5809673_5 Necessary for normal cell division and for the maintenance of normal septation K03978 - - 0.000000000000000000000000000000000000000000000000000000000000000001118 235.0
DYD1_k127_5809673_6 COG2863 Cytochrome c553 - - - 0.000000000000000000000000000000000000000000000000000004366 197.0
DYD1_k127_5809673_7 membrane transporter protein K07090 - - 0.00000000000000000000000000000000000000000000000000002832 199.0
DYD1_k127_5809673_8 Thiol disulfide interchange protein K03673 - - 0.0000000000000000000000000000000000000000008221 166.0
DYD1_k127_5833642_0 Chromate K07240 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002058 479.0
DYD1_k127_5833642_1 Chromate resistance exported protein - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003443 308.0
DYD1_k127_5833642_3 ornithine cyclodeaminase activity K01750,K18258,K19244 - 1.4.1.1,1.5.1.25,4.3.1.12 0.0000000000000000000000000000000000000000001184 168.0
DYD1_k127_5833642_4 Specifically methylates the cytosine at position 1962 (m5C1962) of 23S rRNA K06969 - 2.1.1.191 0.00000000000000000000000000000000001504 138.0
DYD1_k127_5844938_0 transferase activity, transferring glycosyl groups - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001305 319.0
DYD1_k127_5844938_1 TIGRFAM conserved repeat domain - - - 0.0000000317 68.0
DYD1_k127_5865574_0 PA domain K14647 GO:0005575,GO:0005576 - 0.0 1117.0
DYD1_k127_5865574_1 Domain of unknown function (DUF305) - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000382 439.0
DYD1_k127_5865574_2 ABC transporter transmembrane region - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003316 449.0
DYD1_k127_5865574_3 DUF218 domain - - - 0.00000000000000000000000000000000000000000000000000000000181 209.0
DYD1_k127_5865574_4 SMART Metal-dependent phosphohydrolase, HD region - - - 0.00000000000000000000000000000000000000000000000002877 187.0
DYD1_k127_5865574_5 Catalyzes the ATP- as well as the pyrophosphate- dependent phosphorylation of a specific serine residue in HPr, a phosphocarrier protein of the phosphoenolpyruvate-dependent sugar phosphotransferase system (PTS). HprK P also catalyzes the pyrophosphate-producing, inorganic phosphate-dependent dephosphorylation (phosphorolysis) of seryl-phosphorylated HPr (P- Ser-HPr). The two antagonistic activities of HprK P are regulated by several intracellular metabolites, which change their concentration in response to the absence or presence of rapidly metabolisable carbon sources (glucose, fructose, etc.) in the growth medium. Therefore, by controlling the phosphorylation state of HPr, HPrK P is a sensor enzyme that plays a major role in the regulation of carbon metabolism and sugar transport it mediates carbon catabolite repression (CCR), and regulates PTS-catalyzed carbohydrate uptake and inducer exclusion - - - 0.00000000000000000000000000000000000000000000000938 184.0
DYD1_k127_5922097_0 Sodium proton antiporter, NhaD family - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006454 523.0
DYD1_k127_5922097_1 competence protein COMEC - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001686 333.0
DYD1_k127_5922097_2 - - - - 0.00000000000000000000000000000000000000000001517 178.0
DYD1_k127_5922097_3 Sir2 family - - - 0.00000000000000000000000000000000000001764 150.0
DYD1_k127_5940941_0 In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity K02335 - 2.7.7.7 1.264e-319 995.0
DYD1_k127_5940941_1 Belongs to the ALAD family K01698 - 4.2.1.24 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003763 447.0
DYD1_k127_5940941_2 Involved in the biosynthesis of the chorismate, which leads to the biosynthesis of aromatic amino acids. Catalyzes the reversible NADPH linked reduction of 3-dehydroshikimate (DHSA) to yield shikimate (SA) K00014 GO:0000166,GO:0003674,GO:0003824,GO:0004764,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006082,GO:0008150,GO:0008152,GO:0009058,GO:0009423,GO:0009987,GO:0016053,GO:0016491,GO:0016614,GO:0016616,GO:0019632,GO:0019752,GO:0032787,GO:0036094,GO:0043436,GO:0043648,GO:0043650,GO:0044237,GO:0044249,GO:0044281,GO:0044283,GO:0044424,GO:0044444,GO:0044464,GO:0046394,GO:0046417,GO:0048037,GO:0050661,GO:0050662,GO:0055114,GO:0071704,GO:0097159,GO:1901265,GO:1901363,GO:1901576,GO:1901615 1.1.1.25 0.00000000000000000000000000000000000000000000000000000000000003181 234.0
DYD1_k127_5940941_3 TRAP-type mannitol chloroaromatic compound transport system, small permease component - - - 0.00000000000000000000000000000000000000002689 161.0
DYD1_k127_5940941_4 Protein of unknown function (DUF2782) - - - 0.000000000000000007267 89.0
DYD1_k127_5944737_0 protocatechuate 3,4-dioxygenase activity K03381 - 1.13.11.1 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002836 320.0
DYD1_k127_5944737_1 SMP-30/Gluconolaconase/LRE-like region - - - 0.000000000000000000000000000000000001025 144.0
DYD1_k127_5944737_2 TRANSCRIPTIONal - - - 0.0000000000000000000000002575 111.0
DYD1_k127_5944737_3 - - - - 0.0000001584 60.0
DYD1_k127_5944737_5 Cupin domain - - - 0.00006046 46.0
DYD1_k127_5947613_0 Belongs to the class-I aminoacyl-tRNA synthetase family K01883 - 6.1.1.16 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009552 582.0
DYD1_k127_5947613_1 Splits dipeptides with a prolyl residue in the C- terminal position K01271 - 3.4.13.9 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004371 428.0
DYD1_k127_5947613_2 Fe-S metabolism associated domain - - - 0.000000000000000000000000000000000000000001303 160.0
DYD1_k127_5947613_4 transporter - - - 0.0000000002147 66.0
DYD1_k127_5998103_0 In eubacteria ppGpp (guanosine 3'-diphosphate 5-' diphosphate) is a mediator of the stringent response that coordinates a variety of cellular activities in response to changes in nutritional abundance K00951 - 2.7.6.5 7.738e-208 670.0
DYD1_k127_5998103_1 ATP-dependent helicase K03578 - 3.6.4.13 0.0000000000000000000000000000307 124.0
DYD1_k127_5999840_0 E3 component of 2-oxoglutarate dehydrogenase complex K00382 - 1.8.1.4 4.342e-194 615.0
DYD1_k127_5999840_1 Dehydrogenase E1 component K00164 - 1.2.4.2 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001919 470.0
DYD1_k127_5999840_2 The 2-oxoglutarate dehydrogenase complex catalyzes the overall conversion of 2-oxoglutarate to succinyl-CoA and CO(2) K00658 - 2.3.1.61 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005321 440.0
DYD1_k127_5999840_3 Quinone oxidoreductase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001295 427.0
DYD1_k127_5999840_4 Peroxiredoxin K03386 - 1.11.1.15 0.00000000000000000000000000000000000000000000000000000000008402 206.0
DYD1_k127_5999840_5 cheY-homologous receiver domain K02658 - - 0.00000000000000000000000000000000000001204 147.0
DYD1_k127_6022893_0 TonB dependent receptor - - - 3.864e-205 669.0
DYD1_k127_6022893_1 MotA TolQ ExbB proton channel K03561 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007804 419.0
DYD1_k127_6022893_2 TPR repeat - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002091 337.0
DYD1_k127_6022893_3 PFAM Biopolymer transport protein ExbD TolR K03559 - - 0.000000000000000000000000000000000000000000000000000000006604 200.0
DYD1_k127_6022893_4 Protein of unknown function (DUF3450) - - - 0.00000000000000000000000000000000000000000000000000000005211 206.0
DYD1_k127_6022893_5 MotA/TolQ/ExbB proton channel family K03561 - - 0.00000000000000000000000000000000000000000000000000000005283 202.0
DYD1_k127_6022893_6 Interacts with outer membrane receptor proteins that carry out high-affinity binding and energy dependent uptake into the periplasmic space of specific substrates. It could act to transduce energy from the cytoplasmic membrane to specific energy- requiring processes in the outer membrane, resulting in the release into the periplasm of ligands bound by these outer membrane proteins K03832 - - 0.0000000000000000000000000000000000000000000000266 177.0
DYD1_k127_6022893_7 phosphorelay signal transduction system K07662 - - 0.0000004471 51.0
DYD1_k127_604496_0 Belongs to the FAD-dependent oxidoreductase 2 family. FRD SDH subfamily K00239 - 1.3.5.1,1.3.5.4 1.468e-310 959.0
DYD1_k127_604496_1 The UvrABC repair system catalyzes the recognition and processing of DNA lesions. UvrC both incises the 5' and 3' sides of the lesion. The N-terminal half is responsible for the 3' incision and the C-terminal half is responsible for the 5' incision K03703 - - 2.565e-197 636.0
DYD1_k127_604496_10 Belongs to the CDP-alcohol phosphatidyltransferase class-I family K00995,K08744 - 2.7.8.41,2.7.8.5 0.00000000000000000000000000000000000000000000000000006806 194.0
DYD1_k127_604496_11 DNA internalization-related competence protein ComEC Rec2 K02238 - - 0.000000000000000000000000000000000003721 145.0
DYD1_k127_604496_12 PFAM Biopolymer transport protein ExbD TolR K03559 - - 0.000000000000000000000000000000002579 134.0
DYD1_k127_604496_13 Belongs to the GcvT family K06980 - - 0.000000000000000000000000000003072 130.0
DYD1_k127_604496_14 Succinate dehydrogenase K00241 - - 0.00000000000000000000000000001342 123.0
DYD1_k127_604496_15 succinate dehydrogenase K00242 - - 0.00000000000000000000002739 109.0
DYD1_k127_604496_16 Specific class of high-redox-potential 4Fe-4S ferredoxins. Functions in anaerobic electron transport in most purple and in some other photosynthetic bacteria and in at least one genus (Paracoccus) of halophilic, denitrifying bacteria - - - 0.0000000000000008957 83.0
DYD1_k127_604496_17 - - - - 0.0000000000001436 76.0
DYD1_k127_604496_18 Flavinator of succinate dehydrogenase K09159 - - 0.00000000006654 66.0
DYD1_k127_604496_2 Converts 2C-methyl-D-erythritol 2,4-cyclodiphosphate (ME-2,4cPP) into 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate K03526 GO:0003674,GO:0003824,GO:0006081,GO:0006082,GO:0006090,GO:0006629,GO:0006644,GO:0006720,GO:0006793,GO:0006796,GO:0008150,GO:0008152,GO:0008299,GO:0008610,GO:0008654,GO:0009058,GO:0009240,GO:0009987,GO:0016491,GO:0016725,GO:0019288,GO:0019637,GO:0019682,GO:0019752,GO:0032787,GO:0043436,GO:0044237,GO:0044238,GO:0044249,GO:0044255,GO:0044281,GO:0046429,GO:0046490,GO:0052592,GO:0055114,GO:0071704,GO:0090407,GO:1901135,GO:1901576 1.17.7.1,1.17.7.3 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004364 601.0
DYD1_k127_604496_3 Involved in lipid A export and possibly also in glycerophospholipid export and for biogenesis of the outer membrane. Transmembrane domains (TMD) form a pore in the inner membrane and the ATP-binding domain (NBD) is responsible for energy generation K11085 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001196 542.0
DYD1_k127_604496_4 Belongs to the succinate dehydrogenase fumarate reductase iron-sulfur protein family K00240 - 1.3.5.1,1.3.5.4 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001062 450.0
DYD1_k127_604496_5 COG0010 Arginase agmatinase formimionoglutamate hydrolase, arginase family K01476 - 3.5.3.1 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001274 391.0
DYD1_k127_604496_6 protein methyltransferase activity - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004609 311.0
DYD1_k127_604496_7 Transfers the gamma-phosphate of ATP to the 4'-position of a tetraacyldisaccharide 1-phosphate intermediate (termed DS-1- P) to form tetraacyldisaccharide 1,4'-bis-phosphate (lipid IVA) K00912 - 2.7.1.130 0.00000000000000000000000000000000000000000000000000000000000000000000000000000001359 281.0
DYD1_k127_604496_8 Activates KDO (a required 8-carbon sugar) for incorporation into bacterial lipopolysaccharide in Gram-negative bacteria K00979 GO:0000271,GO:0000287,GO:0003674,GO:0003824,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005975,GO:0005976,GO:0005996,GO:0006082,GO:0006629,GO:0008150,GO:0008152,GO:0008610,GO:0008653,GO:0008690,GO:0009058,GO:0009059,GO:0009103,GO:0009244,GO:0009311,GO:0009312,GO:0009987,GO:0016051,GO:0016053,GO:0016740,GO:0016772,GO:0016779,GO:0019294,GO:0019752,GO:0033692,GO:0034637,GO:0034645,GO:0043167,GO:0043169,GO:0043170,GO:0043436,GO:0044237,GO:0044238,GO:0044249,GO:0044255,GO:0044260,GO:0044262,GO:0044264,GO:0044281,GO:0044283,GO:0044424,GO:0044444,GO:0044464,GO:0046364,GO:0046394,GO:0046400,GO:0046401,GO:0046872,GO:0070567,GO:0071704,GO:1901135,GO:1901137,GO:1901576,GO:1903509 2.7.7.38 0.0000000000000000000000000000000000000000000000000000000000000000000000004897 254.0
DYD1_k127_604496_9 Biopolymer K03561 - - 0.000000000000000000000000000000000000000000000000000000000000000000001045 242.0
DYD1_k127_6068677_0 glutamate dehydrogenase K15371 - 1.4.1.2 0.0 1146.0
DYD1_k127_6068677_1 Methionine synthase K00548 GO:0000096,GO:0000097,GO:0003674,GO:0003824,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006082,GO:0006464,GO:0006479,GO:0006520,GO:0006555,GO:0006575,GO:0006725,GO:0006730,GO:0006732,GO:0006760,GO:0006790,GO:0006807,GO:0008144,GO:0008150,GO:0008152,GO:0008168,GO:0008172,GO:0008213,GO:0008270,GO:0008276,GO:0008652,GO:0008705,GO:0009058,GO:0009066,GO:0009067,GO:0009086,GO:0009987,GO:0016053,GO:0016740,GO:0016741,GO:0019538,GO:0019752,GO:0019842,GO:0031419,GO:0032259,GO:0034641,GO:0035999,GO:0036094,GO:0036211,GO:0042084,GO:0042558,GO:0043167,GO:0043169,GO:0043170,GO:0043412,GO:0043414,GO:0043436,GO:0043603,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044272,GO:0044281,GO:0044283,GO:0044424,GO:0044444,GO:0044464,GO:0046394,GO:0046483,GO:0046653,GO:0046872,GO:0046906,GO:0046914,GO:0048037,GO:0050667,GO:0051186,GO:0071704,GO:0097159,GO:0140096,GO:1901360,GO:1901363,GO:1901564,GO:1901566,GO:1901576,GO:1901605,GO:1901607 2.1.1.13 2.349e-268 845.0
DYD1_k127_6068677_2 acyl-CoA dehydrogenase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001675 570.0
DYD1_k127_6068677_3 ArsR family transcriptional regulator - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002774 354.0
DYD1_k127_6088168_0 cAMP biosynthetic process - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006996 356.0
DYD1_k127_6088168_1 PFAM SMP-30 Gluconolaconase - - - 0.00000000000000000000000000000000000000000000002302 183.0
DYD1_k127_6088168_2 Transcriptional regulatory protein, C terminal - - - 0.0000002361 64.0
DYD1_k127_6090279_0 ABC-type uncharacterized transport system - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001714 526.0
DYD1_k127_6090279_1 COG1277 ABC-type transport system involved in multi-copper enzyme maturation, permease component K01992 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002008 378.0
DYD1_k127_6090279_2 ABC transporter K01990 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008495 360.0
DYD1_k127_6090279_3 Succinylglutamate desuccinylase / Aspartoacylase family - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000384 324.0
DYD1_k127_6090279_4 Domain of unknown function (DUF4340) - - - 0.0000000000000000000000000000000000000000003488 170.0
DYD1_k127_6090279_5 COG2366 Protein related to penicillin acylase K01434 - 3.5.1.11 0.0000000000000000000000000000000000000003662 154.0
DYD1_k127_6095373_0 Phosphate transport system permease protein K02038 - - 4.519e-220 695.0
DYD1_k127_6095373_1 PFAM binding-protein-dependent transport systems inner membrane component K02037 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001192 473.0
DYD1_k127_6095373_2 Part of the ABC transporter complex PstSACB involved in phosphate import. Responsible for energy coupling to the transport system K02036 - 3.6.3.27 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001886 415.0
DYD1_k127_6095373_3 Plays a role in the regulation of phosphate uptake K02039 - - 0.00000000000000000000000000000000000000000000000000000000000000000000007588 250.0
DYD1_k127_6095373_4 phosphorelay signal transduction system K07662 - - 0.0000004471 51.0
DYD1_k127_609695_0 Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family - - - 0.0 1383.0
DYD1_k127_609695_1 Adenylate cyclase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004732 566.0
DYD1_k127_609695_2 Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003062 406.0
DYD1_k127_609695_3 COG1073 Hydrolases of the alpha beta superfamily K06889 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000002035 284.0
DYD1_k127_609695_4 Transcriptional regulator K03566 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000003707 282.0
DYD1_k127_609695_5 - - - - 0.00000000000000000000000000000000000000000000000000000000008214 218.0
DYD1_k127_609695_6 Protein of Unknown function (DUF2784) - - - 0.00000000000000000000000000000000000000006705 154.0
DYD1_k127_609695_7 PFAM Cold-shock protein, DNA-binding K03704 - - 0.000000000000000000000000000002345 120.0
DYD1_k127_609695_8 Acetyltransferase (GNAT) family - - - 0.0000000002108 62.0
DYD1_k127_609695_9 Sulfatase K01130 - 3.1.6.1 0.0000001054 54.0
DYD1_k127_610889_0 Adenylate cyclase - - - 0.00000000000000000000000000000000000000000000181 187.0
DYD1_k127_610889_1 2OG-Fe(II) oxygenase superfamily - - - 0.00000000000000000000000000000000000000005791 158.0
DYD1_k127_610889_2 Adenylate cyclase - - - 0.000000000000000000000000004716 118.0
DYD1_k127_6117458_0 ABC-type multidrug transport system ATPase and permease K06147 - - 9.588e-288 893.0
DYD1_k127_6117458_1 cAMP biosynthetic process - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000001271 293.0
DYD1_k127_6117458_2 Esterase PHB depolymerase - - - 0.000000000000000008443 84.0
DYD1_k127_6130714_0 Sortilin, neurotensin receptor 3, - - - 0.0 1338.0
DYD1_k127_6130714_1 cellulose binding - - - 0.0 1157.0
DYD1_k127_6130714_2 Cytochrome c oxidase is the component of the respiratory chain that catalyzes the reduction of oxygen to water. Subunits 1- 3 form the functional core of the enzyme complex. CO I is the catalytic subunit of the enzyme. Electrons originating in cytochrome c are transferred via the copper A center of subunit 2 and heme A of subunit 1 to the bimetallic center formed by heme A3 and copper B K02274,K02298 - 1.10.3.10,1.9.3.1 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003812 577.0
DYD1_k127_6130714_3 COG1622 Heme copper-type cytochrome quinol oxidases, subunit 2 K02275 - 1.9.3.1 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001835 575.0
DYD1_k127_6130714_5 - - - - 0.0000000000000000000000000000000000000000000000000001728 190.0
DYD1_k127_6130714_6 - - - - 0.0000002995 57.0
DYD1_k127_6143527_0 Component of the pyruvate dehydrogenase (PDH) complex, that catalyzes the overall conversion of pyruvate to acetyl-CoA and CO(2) K00163 - 1.2.4.1 0.0 1328.0
DYD1_k127_6143527_1 malic enzyme K00029 - 1.1.1.40 2.951e-309 964.0
DYD1_k127_6143527_10 PFAM alkyl hydroperoxide reductase Thiol specific antioxidant Mal allergen - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000004485 282.0
DYD1_k127_6143527_11 Universal stress protein family - - - 0.0000000000000000000000000000000000000001701 154.0
DYD1_k127_6143527_12 endonuclease activity - - - 0.000000000000000000000000000000000000115 147.0
DYD1_k127_6143527_13 - - - - 0.00000000000000000000004189 106.0
DYD1_k127_6143527_14 - - - - 0.00000172 60.0
DYD1_k127_6143527_15 - - - - 0.0000163 56.0
DYD1_k127_6143527_2 Catalyzes the transfer of a two-carbon ketol group from a ketose donor to an aldose acceptor, via a covalent intermediate with the cofactor thiamine pyrophosphate K00615 - 2.2.1.1 1.135e-297 934.0
DYD1_k127_6143527_3 Sodium:alanine symporter family K03310 - - 4.812e-203 644.0
DYD1_k127_6143527_4 Belongs to the glyceraldehyde-3-phosphate dehydrogenase family K00134 - 1.2.1.12 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001068 528.0
DYD1_k127_6143527_5 Belongs to the phosphoglycerate kinase family K00927 - 2.7.2.3 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002343 519.0
DYD1_k127_6143527_6 Belongs to the pyruvate kinase family K00873 - 2.7.1.40 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009713 499.0
DYD1_k127_6143527_7 Belongs to the class I fructose-bisphosphate aldolase family K01623 - 4.1.2.13 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001918 474.0
DYD1_k127_6143527_8 acetyltransferase component of pyruvate dehydrogenase complex K00627 - 2.3.1.12 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004126 449.0
DYD1_k127_6143527_9 Pyridine nucleotide-disulphide oxidoreductase, dimerisation K00382 - 1.8.1.4 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003682 374.0
DYD1_k127_6149163_0 AcrB/AcrD/AcrF family - - - 0.0 1537.0
DYD1_k127_6149163_1 Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001917 413.0
DYD1_k127_6149163_2 COG1629 Outer membrane receptor proteins, mostly Fe transport K02014 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005864 408.0
DYD1_k127_6149163_3 Tetratricopeptide repeat - - - 0.00000000000000000000000000000000000000000000000000000000000005445 244.0
DYD1_k127_6149163_4 Adenylate cyclase - - - 0.0000000000000000000000000000000000000000000000000000003017 218.0
DYD1_k127_6149163_5 TIGRFAM DJ-1 family protein K03152 - 3.5.1.124 0.000000000000000000000000008018 112.0
DYD1_k127_6158856_0 Salmonella virulence plasmid 65kDa B protein - - - 0.00000000000000000000000000000000000000000000000000003821 216.0
DYD1_k127_6162338_0 Beta-lactamase enzyme family K17836 - 3.5.2.6 0.000000000000000000000000000000000009566 139.0
DYD1_k127_6162338_1 CARDB domain-containing protein,subtilase family protease - - - 0.00000006814 63.0
DYD1_k127_6162338_2 - - - - 0.00001226 56.0
DYD1_k127_6170507_0 Catalyzes the methylthiolation of an aspartic acid residue of ribosomal protein S12 K14441 - 2.8.4.4 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000071 560.0
DYD1_k127_6170507_1 cation diffusion facilitator family transporter - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003312 366.0
DYD1_k127_6170507_2 Rhomboid family - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000007601 258.0
DYD1_k127_6170507_3 Belongs to the 1-acyl-sn-glycerol-3-phosphate acyltransferase family K00655 - 2.3.1.51 0.00000000000000000000000000000000000000000000000000000000000000006925 229.0
DYD1_k127_6170507_4 Polyketide cyclase / dehydrase and lipid transport - - - 0.000000000000000000000000000000000000000000000000000000004782 211.0
DYD1_k127_6170507_5 Necessary for efficient RNA polymerase transcription elongation past template-encoded arresting sites. The arresting sites in DNA have the property of trapping a certain fraction of elongating RNA polymerases that pass through, resulting in locked ternary complexes. Cleavage of the nascent transcript by cleavage factors such as GreA or GreB allows the resumption of elongation from the new 3'terminus. GreB releases sequences of up to 9 nucleotides in length K04760 - - 0.0000000000000000000000000000000000000000000000000000001317 198.0
DYD1_k127_6170507_6 Hsp20/alpha crystallin family K04080 - - 0.00000000000000000000000000000000000000000000009925 173.0
DYD1_k127_6170507_7 Functions in the N-end rule pathway of protein degradation where it conjugates Leu, Phe and, less efficiently, Met from aminoacyl-tRNAs to the N-termini of proteins containing an N-terminal arginine or lysine K00684 - 2.3.2.6 0.000000000000000000000000000000000000000004098 158.0
DYD1_k127_6170507_8 Rossmann-like domain - - - 0.0000000000000000000000003974 116.0
DYD1_k127_617570_0 Sodium:neurotransmitter symporter family - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000013 320.0
DYD1_k127_617570_1 Belongs to the iron ascorbate-dependent oxidoreductase family - - - 0.0000000000000000000000000000000000000000000000000000000000000001287 239.0
DYD1_k127_617570_2 Putative aminopeptidase - - - 0.0000000000000000000000000000000000000000000000000000000000004429 220.0
DYD1_k127_617570_3 Belongs to the MsrB Met sulfoxide reductase family K07305 - 1.8.4.12 0.000000000000000000000000000000000000000000000000006658 186.0
DYD1_k127_6220922_0 Part of a heterotetrameric complex that catalyzes the two-step biosynthesis of anthranilate, an intermediate in the biosynthesis of L-tryptophan. In the first step, the glutamine- binding beta subunit (TrpG) of anthranilate synthase (AS) provides the glutamine amidotransferase activity which generates ammonia as a substrate that, along with chorismate, is used in the second step, catalyzed by the large alpha subunit of AS (TrpE) to produce anthranilate. In the absence of TrpG, TrpE can synthesize anthranilate directly from chorismate and high concentrations of ammonia K01657 - 4.1.3.27 6.182e-206 651.0
DYD1_k127_6220922_1 protein containing a von Willebrand factor type A (vWA) domain K07114 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006274 440.0
DYD1_k127_6220922_10 Oxygenase that introduces the hydroxyl group at carbon five of 2-nonaprenyl-3-methyl-6-methoxy-1,4-benzoquinol resulting in the formation of 2-nonaprenyl-3-methyl-5-hydroxy-6-methoxy-1,4- benzoquinol K06134 - - 0.000000000000000000000000000000000000000000000000000000000000000000001606 246.0
DYD1_k127_6220922_11 This protein is one of the early assembly proteins of the 50S ribosomal subunit, although it is not seen to bind rRNA by itself. It is important during the early stages of 50S assembly K02871 - - 0.0000000000000000000000000000000000000000000000000000000000000000001986 232.0
DYD1_k127_6220922_12 Protein of unknown function (DUF962) - - - 0.00000000000000000000000000000000000000000000000000002014 193.0
DYD1_k127_6220922_13 Belongs to the universal ribosomal protein uS9 family K02996 - - 0.00000000000000000000000000000000000000000000000000002667 197.0
DYD1_k127_6220922_14 Regulatory DnaK co-chaperone. Direct interaction between DnaK and DjlA is needed for the induction of the wcaABCDE operon, involved in the synthesis of a colanic acid polysaccharide capsule, possibly through activation of the RcsB RcsC phosphotransfer signaling pathway. The colanic acid capsule may help the bacterium survive conditions outside the host K05801 - - 0.00000000000000000000000000000000000000000000000000009057 197.0
DYD1_k127_6220922_15 Ferredoxin - - - 0.000000000000000000000000000000000000000000000007861 177.0
DYD1_k127_6220922_16 Protein of unknown function, DUF481 K07283 - - 0.0000000000000000000000000000000000000000000009377 175.0
DYD1_k127_6220922_17 Sortase family - - - 0.00000000000000000000000000000000000000000000191 172.0
DYD1_k127_6220922_18 - - - - 0.000000000000000000000000000000000000000293 153.0
DYD1_k127_6220922_19 Predicted integral membrane protein (DUF2269) - - - 0.000000000000000000000000000000000000002734 154.0
DYD1_k127_6220922_2 Catalyzes the transfer of the phosphoribosyl group of 5- phosphorylribose-1-pyrophosphate (PRPP) to anthranilate to yield N-(5'-phosphoribosyl)-anthranilate (PRA) K00766 GO:0000162,GO:0003674,GO:0003824,GO:0004048,GO:0006082,GO:0006520,GO:0006568,GO:0006576,GO:0006586,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0008652,GO:0009058,GO:0009072,GO:0009073,GO:0009308,GO:0009309,GO:0009987,GO:0016053,GO:0016740,GO:0016757,GO:0016763,GO:0018130,GO:0019438,GO:0019752,GO:0034641,GO:0042401,GO:0042430,GO:0042435,GO:0043436,GO:0044106,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0044283,GO:0046219,GO:0046394,GO:0046483,GO:0071704,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576,GO:1901605,GO:1901607 2.4.2.18 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004094 415.0
DYD1_k127_6220922_21 CARDB domain-containing protein,subtilase family protease - - - 0.00000000000000000001148 106.0
DYD1_k127_6220922_22 Participates in electron transfer between P700 and the cytochrome b6-f complex in photosystem I K02638 - - 0.0000000036 69.0
DYD1_k127_6220922_23 - - - - 0.0000005466 62.0
DYD1_k127_6220922_24 Adenylate cyclase - - - 0.000001165 58.0
DYD1_k127_6220922_3 SAICAR synthetase K01923 - 6.3.2.6 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006336 394.0
DYD1_k127_6220922_4 Belongs to the ribulose-phosphate 3-epimerase family K01783 - 5.1.3.1 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001151 356.0
DYD1_k127_6220922_5 Histidine kinase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009998 370.0
DYD1_k127_6220922_6 COG0745 Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain K02483 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004232 318.0
DYD1_k127_6220922_7 Saccharopine dehydrogenase NADP binding domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007447 317.0
DYD1_k127_6220922_8 Belongs to the TrpC family K01609 GO:0003674,GO:0003824,GO:0004425,GO:0016829,GO:0016830,GO:0016831 4.1.1.48 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000001318 296.0
DYD1_k127_6220922_9 with TrpE catalyzes the formation of anthranilate and glutamate from chorismate and glutamine K01658 - 4.1.3.27 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000003785 285.0
DYD1_k127_6246031_0 Domain of unknown function DUF87 K06915 - - 1.626e-205 656.0
DYD1_k127_6246031_1 Bacterial protein of unknown function (DUF885) - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005348 462.0
DYD1_k127_6246031_2 Sodium hydrogen antiporter - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009479 416.0
DYD1_k127_6246031_3 Methyltransferase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002698 355.0
DYD1_k127_6246031_4 signal transduction protein with a C-terminal ATPase domain K08082 - 2.7.13.3 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002766 359.0
DYD1_k127_6246031_5 Putative neutral zinc metallopeptidase K06973 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000003215 264.0
DYD1_k127_6246031_6 Polymer-forming cytoskeletal - - - 0.000000000000000000000000000000000000000006862 160.0
DYD1_k127_6259337_0 Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain K13482 - 1.17.1.4 2.377e-317 992.0
DYD1_k127_6259337_1 Xanthine dehydrogenase K13481 - 1.17.1.4 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003192 480.0
DYD1_k127_6259337_2 Polysaccharide deacetylase K01452 - 3.5.1.41 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001576 453.0
DYD1_k127_6259337_3 Belongs to the transthyretin family. 5-hydroxyisourate hydrolase subfamily K07127 - 3.5.2.17 0.000000000000000000000000000000000000000005974 160.0
DYD1_k127_6259337_4 Xanthine and CO dehydrogenases maturation factor XdhC CoxF family K07402 - - 0.000000000005044 69.0
DYD1_k127_6269268_0 Gamma-glutamyltranspeptidase K00681 - 2.3.2.2,3.4.19.13 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000005487 305.0
DYD1_k127_6269268_1 Reversibly transfers an adenylyl group from ATP to 4'- phosphopantetheine, yielding dephospho-CoA (dPCoA) and pyrophosphate K00954 GO:0003674,GO:0003824,GO:0004595,GO:0005488,GO:0005515,GO:0006139,GO:0006163,GO:0006164,GO:0006725,GO:0006732,GO:0006753,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009108,GO:0009117,GO:0009150,GO:0009152,GO:0009165,GO:0009259,GO:0009260,GO:0009987,GO:0015936,GO:0015937,GO:0016740,GO:0016772,GO:0016779,GO:0018130,GO:0019438,GO:0019637,GO:0019693,GO:0033865,GO:0033866,GO:0033875,GO:0034030,GO:0034032,GO:0034033,GO:0034641,GO:0034654,GO:0042802,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0046390,GO:0046483,GO:0051186,GO:0051188,GO:0055086,GO:0070566,GO:0071704,GO:0072521,GO:0072522,GO:0090407,GO:1901135,GO:1901137,GO:1901293,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576 2.7.7.3 0.000000000000000000000000000000000000000000000000000000000004757 211.0
DYD1_k127_6269268_2 Involved in targeting and insertion of nascent membrane proteins into the cytoplasmic membrane. Acts as a receptor for the complex formed by the signal recognition particle (SRP) and the ribosome-nascent chain (RNC). Interaction with SRP-RNC leads to the transfer of the RNC complex to the Sec translocase for insertion into the membrane, the hydrolysis of GTP by both Ffh and FtsY, and the dissociation of the SRP-FtsY complex into the individual components K03110 GO:0000166,GO:0001882,GO:0001883,GO:0003674,GO:0003824,GO:0003924,GO:0005488,GO:0005525,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005886,GO:0006605,GO:0006612,GO:0006613,GO:0006614,GO:0006810,GO:0006886,GO:0008104,GO:0008150,GO:0015031,GO:0015833,GO:0016020,GO:0016462,GO:0016787,GO:0016817,GO:0016818,GO:0017076,GO:0017111,GO:0019001,GO:0019897,GO:0019898,GO:0031224,GO:0031226,GO:0032549,GO:0032550,GO:0032553,GO:0032555,GO:0032561,GO:0033036,GO:0033365,GO:0034613,GO:0035639,GO:0036094,GO:0042886,GO:0043167,GO:0043168,GO:0044424,GO:0044425,GO:0044444,GO:0044459,GO:0044464,GO:0045047,GO:0045184,GO:0046907,GO:0051179,GO:0051234,GO:0051641,GO:0051649,GO:0070727,GO:0070972,GO:0071702,GO:0071705,GO:0071944,GO:0072594,GO:0072599,GO:0072657,GO:0090150,GO:0097159,GO:0097367,GO:1901265,GO:1901363 - 0.0000000000000000000000000000000000000000000000000001814 191.0
DYD1_k127_6269268_3 Specifically methylates the guanine in position 966 of 16S rRNA in the assembled 30S particle K08316 - 2.1.1.171 0.00000000000000000000000000000000000000000000000004632 194.0
DYD1_k127_6269268_4 PFAM 4Fe-4S ferredoxin iron-sulfur binding domain protein - - - 0.00000000000000000000000000000000000000002357 153.0
DYD1_k127_6271681_0 aminopeptidase K01262 - 3.4.11.9 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001217 535.0
DYD1_k127_6271681_1 PFAM Protein kinase domain K12132 - 2.7.11.1 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006234 402.0
DYD1_k127_6271681_10 Pilus assembly protein PilZ K02676 - - 0.000000000000000000000000102 108.0
DYD1_k127_6271681_11 Belongs to the UPF0149 family K09895 GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0044424,GO:0044444,GO:0044464 - 0.00000000000000004869 88.0
DYD1_k127_6271681_12 Cell division protein ZapA K09888 GO:0000003,GO:0000278,GO:0000281,GO:0000910,GO:0000917,GO:0000921,GO:0003674,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006996,GO:0007010,GO:0007049,GO:0008150,GO:0009987,GO:0016043,GO:0019954,GO:0022402,GO:0022414,GO:0022607,GO:0030428,GO:0031106,GO:0032153,GO:0032185,GO:0032505,GO:0032506,GO:0034622,GO:0042802,GO:0043093,GO:0043933,GO:0044085,GO:0044424,GO:0044444,GO:0044464,GO:0051301,GO:0061640,GO:0065003,GO:0070925,GO:0071840,GO:0090529,GO:1902410,GO:1903047 - 0.000000000000002022 79.0
DYD1_k127_6271681_13 TIGRFAM TIGR02449 family protein K09892 - - 0.0000000000512 65.0
DYD1_k127_6271681_2 Ubiquinone biosynthesis hydroxylase, UbiH UbiF VisC COQ6 K03185 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000345 358.0
DYD1_k127_6271681_3 Redoxin - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003381 344.0
DYD1_k127_6271681_4 Belongs to the sodium solute symporter (SSF) (TC 2.A.21) family - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001612 335.0
DYD1_k127_6271681_5 Catalyzes the formation of 2-octaprenyl-3-methyl-5-hydroxy-6-methoxy-1,4-benzoquinol from 2-octaprenyl-3-methyl-6-methoxy-1,4-benzoquinol K03184,K18800 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000003284 299.0
DYD1_k127_6271681_6 Catalyzes the reversible conversion of ribose-5- phosphate to ribulose 5-phosphate K01807 - 5.3.1.6 0.000000000000000000000000000000000000000000000000000000000000000000000000000009807 273.0
DYD1_k127_6271681_7 EVE domain - - - 0.000000000000000000000000000000000000000000000000000000000000000004267 233.0
DYD1_k127_6271681_8 Protein of unknown function (DUF4242) - - - 0.00000000000000000000000000000001177 128.0
DYD1_k127_6271681_9 Belongs to the 5-formyltetrahydrofolate cyclo-ligase family K01934 GO:0003674,GO:0003824,GO:0006082,GO:0006575,GO:0006725,GO:0006730,GO:0006732,GO:0006760,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009108,GO:0009396,GO:0009987,GO:0016053,GO:0016874,GO:0016879,GO:0016882,GO:0018130,GO:0019438,GO:0019752,GO:0022611,GO:0030272,GO:0032502,GO:0034641,GO:0035999,GO:0042398,GO:0042558,GO:0042559,GO:0043436,GO:0043603,GO:0043604,GO:0044237,GO:0044249,GO:0044271,GO:0044281,GO:0044283,GO:0046394,GO:0046483,GO:0046653,GO:0051186,GO:0051188,GO:0071704,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576 6.3.3.2 0.000000000000000000000000001606 120.0
DYD1_k127_6294526_0 Catalyzes the formation of the alpha-1,6-glucosidic linkages in glycogen by scission of a 1,4-alpha-linked oligosaccharide from growing alpha-1,4-glucan chains and the subsequent attachment of the oligosaccharide to the alpha-1,6 position K00700 - 2.4.1.18 6.661e-266 838.0
DYD1_k127_6294526_1 TonB dependent receptor - - - 6.275e-200 648.0
DYD1_k127_6294526_2 Catalyzes the synthesis of ADP-glucose, a sugar donor used in elongation reactions on alpha-glucans K00975 - 2.7.7.27 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001639 576.0
DYD1_k127_6294526_3 COG0659 Sulfate permease and related transporters (MFS superfamily) K03321 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007995 576.0
DYD1_k127_6294526_4 Belongs to the glycosyl hydrolase 57 family - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001507 498.0
DYD1_k127_6294526_5 Mycolic acid cyclopropane synthetase K00574 - 2.1.1.79 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005104 474.0
DYD1_k127_6294526_6 PQQ enzyme repeat K00117 - 1.1.5.2 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001912 379.0
DYD1_k127_6294526_7 CutA1 divalent ion tolerance protein K03926 - - 0.00000000000000000000000000000000002051 137.0
DYD1_k127_6294526_8 Adenylate cyclase - - - 0.00000000000000000000000152 106.0
DYD1_k127_6343281_0 PFAM Glycoside hydrolase 15-related - - - 3.676e-275 865.0
DYD1_k127_6343281_1 Type I phosphodiesterase / nucleotide pyrophosphatase - - - 6.849e-231 758.0
DYD1_k127_6343281_10 Domain of unknown function (DUF4010) - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000001124 305.0
DYD1_k127_6343281_11 SNARE associated Golgi protein - - - 0.0000000000000000000000000000000000000000000000000000000000000000000001416 246.0
DYD1_k127_6343281_12 CDP-glycerol poly(glycerophosphate) glycerophosphotransferase - - - 0.00000000000000000000000000000000000000000000000000000000000001925 229.0
DYD1_k127_6343281_13 60Kd inner membrane protein - - - 0.00000000000000000000000000000000001255 154.0
DYD1_k127_6343281_14 Cytochrome c - - - 0.00000000000000000000000000000001172 136.0
DYD1_k127_6343281_16 ATP dependent DNA ligase domain K01971 - 6.5.1.1 0.00002382 51.0
DYD1_k127_6343281_2 oxidase, subunit K00425 - 1.10.3.14 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005922 605.0
DYD1_k127_6343281_3 Phosphoenolpyruvate phosphomutase K01841 - 5.4.2.9 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003835 497.0
DYD1_k127_6343281_4 PFAM Glycosyl transferase, group 1 K08256 - 2.4.1.345 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001845 460.0
DYD1_k127_6343281_5 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003401 417.0
DYD1_k127_6343281_6 COG1294 Cytochrome bd-type quinol oxidase, subunit 2 K00426 - 1.10.3.14 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001689 404.0
DYD1_k127_6343281_7 Belongs to the class-V pyridoxal-phosphate-dependent aminotransferase family. PhnW subfamily K03430 - 2.6.1.37 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007422 372.0
DYD1_k127_6343281_8 hydrolase of alkaline phosphatase superfamily K07014 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002092 347.0
DYD1_k127_6343281_9 Phytanoyl-CoA dioxygenase (PhyH) K21195 - 1.14.11.46 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002246 310.0
DYD1_k127_634779_0 Releases the supercoiling and torsional tension of DNA, which is introduced during the DNA replication and transcription, by transiently cleaving and rejoining one strand of the DNA duplex. Introduces a single-strand break via transesterification at a target site in duplex DNA. The scissile phosphodiester is attacked by the catalytic tyrosine of the enzyme, resulting in the formation of a DNA-(5'-phosphotyrosyl)-enzyme intermediate and the expulsion of a 3'-OH DNA strand. The free DNA strand then undergoes passage around the unbroken strand, thus removing DNA supercoils. Finally, in the religation step, the DNA 3'-OH attacks the covalent intermediate to expel the active-site tyrosine and restore the DNA phosphodiester backbone K03168 - 5.99.1.2 1.629e-302 945.0
DYD1_k127_634779_1 PFAM ABC transporter K06158 - - 6.633e-228 722.0
DYD1_k127_634779_10 Removes the formyl group from the N-terminal Met of newly synthesized proteins. Requires at least a dipeptide for an efficient rate of reaction. N-terminal L-methionine is a prerequisite for activity but the enzyme has broad specificity at other positions K01462 GO:0003674,GO:0003824,GO:0006464,GO:0006807,GO:0008150,GO:0008152,GO:0009987,GO:0016787,GO:0016810,GO:0016811,GO:0018193,GO:0018206,GO:0019538,GO:0031365,GO:0036211,GO:0042586,GO:0043170,GO:0043412,GO:0043686,GO:0044237,GO:0044238,GO:0044260,GO:0044267,GO:0071704,GO:1901564 3.5.1.88 0.000000000000000000000000000000000000000000000000000000000000002794 224.0
DYD1_k127_634779_11 Required for the formation of a threonylcarbamoyl group on adenosine at position 37 (t(6)A37) in tRNAs that read codons beginning with adenine. Catalyzes the conversion of L-threonine, HCO(3)(-) CO(2) and ATP to give threonylcarbamoyl-AMP (TC-AMP) as the acyladenylate intermediate, with the release of diphosphate K07566 GO:0000049,GO:0000166,GO:0002949,GO:0003674,GO:0003676,GO:0003723,GO:0003725,GO:0003824,GO:0005488,GO:0005524,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006139,GO:0006396,GO:0006399,GO:0006400,GO:0006450,GO:0006725,GO:0006807,GO:0008033,GO:0008144,GO:0008150,GO:0008152,GO:0009451,GO:0009987,GO:0010467,GO:0016070,GO:0016740,GO:0016772,GO:0016779,GO:0017076,GO:0030554,GO:0032553,GO:0032555,GO:0032559,GO:0034470,GO:0034641,GO:0034660,GO:0035639,GO:0036094,GO:0043167,GO:0043168,GO:0043170,GO:0043412,GO:0044237,GO:0044238,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0061710,GO:0065007,GO:0065008,GO:0070525,GO:0071704,GO:0090304,GO:0097159,GO:0097367,GO:1901265,GO:1901360,GO:1901363 2.7.7.87 0.000000000000000000000000000000000000000000000000000000002668 213.0
DYD1_k127_634779_12 Belongs to the Smg family K03747 - - 0.000000000000000000000000000000000000000000000000000009534 193.0
DYD1_k127_634779_13 Adenylate cyclase K01768 - 4.6.1.1 0.00000000000000000000000000000000000000000008085 178.0
DYD1_k127_634779_14 Adenylate cyclase - - - 0.00000000000000000000000000000000000000002492 171.0
DYD1_k127_634779_15 Cytochrome b5-like Heme/Steroid binding domain - - - 0.0000000000000000000000000000000000001425 146.0
DYD1_k127_634779_16 TIR domain - - - 0.0000000000000000000000000001422 132.0
DYD1_k127_634779_17 Multicopper oxidase - - - 0.00000000000000008987 93.0
DYD1_k127_634779_18 BON domain K04065 - - 0.0000000000000965 79.0
DYD1_k127_634779_19 - - - - 0.0001226 49.0
DYD1_k127_634779_2 Belongs to the monovalent cation proton antiporter 2 (CPA2) transporter (TC 2.A.37) family K03455 - - 6.817e-203 645.0
DYD1_k127_634779_3 lytic transglycosylase activity - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001402 595.0
DYD1_k127_634779_4 TonB dependent receptor K02014 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001859 512.0
DYD1_k127_634779_5 Involved in the heme biosynthesis. Catalyzes the aerobic oxidative decarboxylation of propionate groups of rings A and B of coproporphyrinogen-III to yield the vinyl groups in protoporphyrinogen-IX K00228 GO:0003674,GO:0005488,GO:0005515,GO:0042802,GO:0042803,GO:0046983 1.3.3.3 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002583 475.0
DYD1_k127_634779_6 FAD-binding domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007309 436.0
DYD1_k127_634779_7 Attaches a formyl group to the free amino group of methionyl-tRNA(fMet). The formyl group appears to play a dual role in the initiator identity of N-formylmethionyl-tRNA by promoting its recognition by IF2 and preventing the misappropriation of this tRNA by the elongation apparatus K00604 GO:0003674,GO:0003824,GO:0004479,GO:0006139,GO:0006396,GO:0006399,GO:0006400,GO:0006412,GO:0006413,GO:0006464,GO:0006518,GO:0006725,GO:0006807,GO:0008033,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009451,GO:0009987,GO:0010467,GO:0016070,GO:0016740,GO:0016741,GO:0016742,GO:0019538,GO:0019988,GO:0034470,GO:0034641,GO:0034645,GO:0034660,GO:0036211,GO:0043043,GO:0043170,GO:0043412,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0046483,GO:0071704,GO:0071951,GO:0090304,GO:0140098,GO:0140101,GO:1901360,GO:1901564,GO:1901566,GO:1901576 2.1.2.9 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007198 374.0
DYD1_k127_634779_8 DNA processing protein DprA K04096 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001051 347.0
DYD1_k127_634779_9 peptidoglycan-binding protein, lysm - - - 0.000000000000000000000000000000000000000000000000000000000000000000105 245.0
DYD1_k127_6358575_0 P COG1629 Outer membrane receptor proteins, mostly Fe transport - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001266 345.0
DYD1_k127_6358575_1 COG1013 Pyruvate ferredoxin oxidoreductase and related 2-oxoacid ferredoxin oxidoreductases, beta subunit K00175 - 1.2.7.11,1.2.7.3 0.00000000000000000000000000000000000000000000000000000000000000000007617 236.0
DYD1_k127_6358575_2 cAMP biosynthetic process - - - 0.00000000000000000000000000000000000003193 163.0
DYD1_k127_6358575_3 Belongs to the D-alanine--D-alanine ligase family - - - 0.000000000000000000000000000002334 126.0
DYD1_k127_6358575_4 domain, Protein - - - 0.000000242 63.0
DYD1_k127_6358575_5 Putative esterase K07214 - - 0.0000005617 58.0
DYD1_k127_6432583_0 X-Pro dipeptidyl-peptidase (S15 family) - - - 7.5e-308 957.0
DYD1_k127_6432583_1 TonB-dependent receptor plug - - - 8.004e-217 697.0
DYD1_k127_6432583_2 Beta-lactamase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000656 566.0
DYD1_k127_6432583_3 COG1680 Beta-lactamase class C and other penicillin binding proteins - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005511 412.0
DYD1_k127_6432583_4 mandelate racemase muconate lactonizing K01776,K02549,K19802 - 4.2.1.113,5.1.1.20,5.1.1.3 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004104 399.0
DYD1_k127_6432583_5 CBS domain containing protein - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000005524 311.0
DYD1_k127_6432583_6 Catalyzes the hydrolysis of a monocarboxylic acid amid to form a monocarboxylate and ammonia K01426 - 3.5.1.4 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000448 294.0
DYD1_k127_6432583_7 DoxX K15977 - - 0.00000000000000000000000000000001725 134.0
DYD1_k127_6432583_8 Protein of unknown function (DUF819) - - - 0.00000000000000000002221 94.0
DYD1_k127_6432583_9 transcriptional regulator - - - 0.000000000000001899 90.0
DYD1_k127_6471696_0 Tetratricopeptide repeat - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002257 423.0
DYD1_k127_6471696_1 CBS domain containing protein - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005417 396.0
DYD1_k127_6471696_10 - - - - 0.00000000000485 76.0
DYD1_k127_6471696_11 - - - - 0.0000002485 59.0
DYD1_k127_6471696_2 COG1335 Amidases related to nicotinamidase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001923 322.0
DYD1_k127_6471696_3 TIGRFAM Haloacid dehalogenase superfamily, subfamily IA, variant 2 with 3rd motif like haloacid dehalogenase K01560 - 3.8.1.2 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001225 305.0
DYD1_k127_6471696_4 Adenylate cyclase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000001128 269.0
DYD1_k127_6471696_5 Acetyl-coenzyme A transporter 1 - - - 0.0000000000000000000000000000000000000000000000000000000000000000000001131 257.0
DYD1_k127_6471696_6 Glutathione-dependent formaldehyde-activating enzyme - - - 0.000000000000000000000000000000001048 133.0
DYD1_k127_6471696_7 CBS domain containing protein - - - 0.00000000000000000000000001006 112.0
DYD1_k127_6471696_8 - - - - 0.00000000000000000000001601 106.0
DYD1_k127_6471696_9 - - - - 0.0000000000001605 80.0
DYD1_k127_6510720_0 Glucose / Sorbosone dehydrogenase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000111 548.0
DYD1_k127_6510720_1 Bacterial protein of unknown function (DUF885) - - - 0.00000000000000000000000000000000000000000000000000000000000000000169 248.0
DYD1_k127_6510720_2 Homocysteine S-methyltransferase K00547 - 2.1.1.10 0.0000000000000000000000000000000000000000000000003482 179.0
DYD1_k127_6510720_3 - - - - 0.00000000000000000000000000000000000000003297 161.0
DYD1_k127_6510720_4 One of the essential components for the initiation of protein synthesis. Stabilizes the binding of IF-2 and IF-3 on the 30S subunit to which N-formylmethionyl-tRNA(fMet) subsequently binds. Helps modulate mRNA selection, yielding the 30S pre- initiation complex (PIC). Upon addition of the 50S ribosomal subunit IF-1, IF-2 and IF-3 are released leaving the mature 70S translation initation complex K02518 GO:0003674,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0043021,GO:0043022,GO:0044424,GO:0044444,GO:0044464,GO:0044877 - 0.000000000000000000000000000000000001449 139.0
DYD1_k127_6510720_5 - - - - 0.000000006614 59.0
DYD1_k127_6523897_0 Membrane - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002325 374.0
DYD1_k127_6523897_1 nucleotide-utilizing enzyme related to molybdopterin-biosynthesis enzyme MoeA - - - 0.00000000000000000000000000000000000000000000000000000000000000007918 230.0
DYD1_k127_6523897_3 Protein of unknown function (DUF418) K07148 - - 0.000000000000000000000000000000000000000000000001113 192.0
DYD1_k127_6523897_4 PFAM DNA polymerase, beta domain protein region - - - 0.00000000000000000000000000000000000000000000003485 177.0
DYD1_k127_6523897_5 PIN domain K07063 - - 0.0000000000000000000000000000002749 127.0
DYD1_k127_6523897_6 - - - - 0.0000000000000000000000000007204 118.0
DYD1_k127_6523897_7 .,Oxidizes proline to glutamate for use as a carbon and nitrogen source - - - 0.00000000000000000002267 94.0
DYD1_k127_6523897_8 Glutathione S-transferase, N-terminal domain - - - 0.00000000000000000006345 96.0
DYD1_k127_6523897_9 TIGRFAM addiction module antidote protein, HigA family K21498 - - 0.0000000000000000832 83.0
DYD1_k127_6530584_0 Catalyzes the reversible interconversion of serine and glycine with tetrahydrofolate (THF) serving as the one-carbon carrier. This reaction serves as the major source of one-carbon groups required for the biosynthesis of purines, thymidylate, methionine, and other important biomolecules. Also exhibits THF- independent aldolase activity toward beta-hydroxyamino acids, producing glycine and aldehydes, via a retro-aldol mechanism K00600 - 2.1.2.1 3.742e-201 633.0
DYD1_k127_6530584_1 Catalyzes cross-linking of the peptidoglycan cell wall at the division septum K03587 - 3.4.16.4 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001126 619.0
DYD1_k127_6530584_10 glycosyl transferase family 2 - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000003034 269.0
DYD1_k127_6530584_11 PFAM LppC K07121 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000002523 277.0
DYD1_k127_6530584_12 Methyltransferase domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000002683 258.0
DYD1_k127_6530584_13 riboflavin synthase, alpha subunit K00793 - 2.5.1.9 0.0000000000000000000000000000000000000000000000000000000000001594 220.0
DYD1_k127_6530584_14 Involved in cell wall formation. Catalyzes the final step in the synthesis of UDP-N-acetylmuramoyl-pentapeptide, the precursor of murein K01929 - 6.3.2.10 0.0000000000000000000000000000000000000000000000000000000000003428 222.0
DYD1_k127_6530584_15 ABC-2 type transporter K09690 - - 0.00000000000000000000000000000000000000000000000000000000003741 214.0
DYD1_k127_6530584_16 Glycosyltransferase like family K07011 - - 0.000000000000000000000000000000000000000000000000000000009238 210.0
DYD1_k127_6530584_17 Negatively regulates transcription of bacterial ribonucleotide reductase nrd genes and operons by binding to NrdR- boxes K07738 - - 0.0000000000000000000000000000000000000000000000000009718 189.0
DYD1_k127_6530584_18 Catalyzes the formation of 6,7-dimethyl-8- ribityllumazine by condensation of 5-amino-6-(D- ribitylamino)uracil with 3,4-dihydroxy-2-butanone 4-phosphate. This is the penultimate step in the biosynthesis of riboflavin K00794 GO:0000906,GO:0003674,GO:0003824,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006766,GO:0006767,GO:0006771,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009110,GO:0009231,GO:0009987,GO:0016740,GO:0016765,GO:0017144,GO:0018130,GO:0034641,GO:0042364,GO:0042726,GO:0042727,GO:0044237,GO:0044249,GO:0044271,GO:0044281,GO:0044283,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0071704,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576 2.5.1.78 0.00000000000000000000000000000000000000000000001848 187.0
DYD1_k127_6530584_19 PPIC-type PPIASE domain K03769 - 5.2.1.8 0.00000000000000000000000000000000000000000000003491 182.0
DYD1_k127_6530584_2 Catalyzes the conversion of D-ribulose 5-phosphate to formate and 3,4-dihydroxy-2-butanone 4-phosphate K14652 - 3.5.4.25,4.1.99.12 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001078 452.0
DYD1_k127_6530584_20 Belongs to the MraZ family K03925 GO:0000976,GO:0001067,GO:0003674,GO:0003676,GO:0003677,GO:0003690,GO:0003700,GO:0005488,GO:0006355,GO:0008150,GO:0009889,GO:0009890,GO:0009892,GO:0010468,GO:0010556,GO:0010558,GO:0010605,GO:0010629,GO:0019219,GO:0019222,GO:0031323,GO:0031324,GO:0031326,GO:0031327,GO:0031333,GO:0043254,GO:0043565,GO:0044087,GO:0044212,GO:0045892,GO:0045934,GO:0048519,GO:0048523,GO:0050789,GO:0050794,GO:0051128,GO:0051129,GO:0051171,GO:0051172,GO:0051252,GO:0051253,GO:0060255,GO:0065007,GO:0080090,GO:0097159,GO:0140110,GO:1901363,GO:1902679,GO:1903506,GO:1903507,GO:1990837,GO:2000112,GO:2000113,GO:2000142,GO:2000143,GO:2001141 - 0.00000000000000000000000000000000000000003833 156.0
DYD1_k127_6530584_21 Lipid phosphatase which dephosphorylates phosphatidylglycerophosphate (PGP) to phosphatidylglycerol (PG) K01095 - 3.1.3.27 0.00000000000000000000000000000000000000006542 156.0
DYD1_k127_6530584_22 Involved in transcription antitermination. Required for transcription of ribosomal RNA (rRNA) genes. Binds specifically to the boxA antiterminator sequence of the ribosomal RNA (rrn) operons K03625 - - 0.0000000000000000000000000000000000000001959 154.0
DYD1_k127_6530584_23 epimerase - - - 0.00000000000000000000000000000000004455 147.0
DYD1_k127_6530584_24 Belongs to the UPF0102 family K07460 - - 0.0000000000000000000000002129 109.0
DYD1_k127_6530584_25 Periplasmic or secreted lipoprotein - GO:0005575,GO:0005623,GO:0009279,GO:0016020,GO:0019867,GO:0030312,GO:0030313,GO:0031975,GO:0032153,GO:0044462,GO:0044464,GO:0071944 - 0.0000000000000000000000002459 112.0
DYD1_k127_6530584_26 LppC putative lipoprotein - - - 0.0000000000000000000008271 99.0
DYD1_k127_6530584_27 Essential cell division protein. May link together the upstream cell division proteins, which are predominantly cytoplasmic, with the downstream cell division proteins, which are predominantly periplasmic K03586 - - 0.00000000000008982 75.0
DYD1_k127_6530584_3 Catalyzes the addition of meso-diaminopimelic acid to the nucleotide precursor UDP-N-acetylmuramoyl-L-alanyl-D-glutamate (UMAG) in the biosynthesis of bacterial cell-wall peptidoglycan K01928 - 6.3.2.13 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000227 437.0
DYD1_k127_6530584_4 pfam abc K09691 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001198 430.0
DYD1_k127_6530584_5 Converts 2,5-diamino-6-(ribosylamino)-4(3h)-pyrimidinone 5'-phosphate into 5-amino-6-(ribosylamino)-2,4(1h,3h)- pyrimidinedione 5'-phosphate K11752 - 1.1.1.193,3.5.4.26 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002667 373.0
DYD1_k127_6530584_6 Specifically methylates the N4 position of cytidine in position 1402 (C1402) of 16S rRNA K03438 GO:0000154,GO:0001510,GO:0003674,GO:0003824,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006139,GO:0006364,GO:0006396,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0008168,GO:0008170,GO:0008173,GO:0008649,GO:0008757,GO:0009451,GO:0009987,GO:0010467,GO:0016070,GO:0016072,GO:0016434,GO:0016740,GO:0016741,GO:0022613,GO:0031167,GO:0032259,GO:0034470,GO:0034641,GO:0034660,GO:0042254,GO:0043170,GO:0043412,GO:0043414,GO:0044085,GO:0044237,GO:0044238,GO:0044260,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0070475,GO:0071424,GO:0071704,GO:0071840,GO:0090304,GO:0140098,GO:0140102,GO:1901360 2.1.1.199 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001342 340.0
DYD1_k127_6530584_7 Catalyzes the 2'-O-methylation of the ribose of cytidine 1402 (C1402) in 16S rRNA K07056 - 2.1.1.198 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001311 317.0
DYD1_k127_6530584_8 - - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000007831 294.0
DYD1_k127_6530584_9 Catalyzes the ATP-dependent phosphorylation of thiamine- monophosphate (TMP) to form thiamine-pyrophosphate (TPP), the active form of vitamin B1 K00946 - 2.7.4.16 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000007935 284.0
DYD1_k127_6533535_0 MMPL family - - - 6.483e-267 848.0
DYD1_k127_6533535_1 Protein of unknown function (DUF1302) - - - 9.857e-194 625.0
DYD1_k127_6533535_10 argininosuccinate lyase K01755 GO:0003674,GO:0003824,GO:0004056,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006082,GO:0006520,GO:0006525,GO:0006526,GO:0006591,GO:0006807,GO:0008150,GO:0008152,GO:0008652,GO:0009058,GO:0009064,GO:0009084,GO:0009987,GO:0016053,GO:0016829,GO:0016840,GO:0016842,GO:0019752,GO:0042450,GO:0043436,GO:0044237,GO:0044238,GO:0044249,GO:0044281,GO:0044283,GO:0044424,GO:0044464,GO:0046394,GO:0071704,GO:1901564,GO:1901566,GO:1901576,GO:1901605,GO:1901607 4.3.2.1 0.00000000000000000000000000000000000000000000000000003179 192.0
DYD1_k127_6533535_11 Removes the pyruvyl group from chorismate, with concomitant aromatization of the ring, to provide 4- hydroxybenzoate (4HB) for the ubiquinone pathway K03181 - 4.1.3.40 0.0000000000000000003608 94.0
DYD1_k127_6533535_2 Protein of unknown function (DUF1329) - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001156 602.0
DYD1_k127_6533535_3 Bacterial virulence factor lipase N-terminal - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003952 470.0
DYD1_k127_6533535_4 Sodium:sulfate symporter transmembrane region K14445 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001013 429.0
DYD1_k127_6533535_5 Acetylglutamate kinase K22478 GO:0003674,GO:0003824,GO:0004042,GO:0005488,GO:0006082,GO:0006520,GO:0006525,GO:0006526,GO:0006807,GO:0008080,GO:0008150,GO:0008152,GO:0008652,GO:0009058,GO:0009064,GO:0009084,GO:0009987,GO:0016053,GO:0016407,GO:0016410,GO:0016597,GO:0016740,GO:0016746,GO:0016747,GO:0019752,GO:0031406,GO:0034618,GO:0036094,GO:0043167,GO:0043168,GO:0043169,GO:0043177,GO:0043436,GO:0044237,GO:0044238,GO:0044249,GO:0044281,GO:0044283,GO:0046394,GO:0071704,GO:1901564,GO:1901566,GO:1901576,GO:1901605,GO:1901607 2.3.1.1,2.7.2.8 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001049 426.0
DYD1_k127_6533535_6 Binds and transfers iron-sulfur (Fe-S) clusters to target apoproteins. Can hydrolyze ATP K03593 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002324 420.0
DYD1_k127_6533535_7 Catalyzes the NADPH-dependent reduction of N-acetyl-5- glutamyl phosphate to yield N-acetyl-L-glutamate 5-semialdehyde K00145 - 1.2.1.38 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008487 337.0
DYD1_k127_6533535_8 Acetylornithine deacetylase K01438 - 3.5.1.16 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003713 309.0
DYD1_k127_6533535_9 protein related to plant photosystem II stability assembly factor - - - 0.0000000000000000000000000000000000000000000000000000000000000003651 236.0
DYD1_k127_6538091_0 Catalyzes the reversible hydrolysis of the amide bond within dihydroorotate. This metabolic intermediate is required for the biosynthesis of pyrimidine nucleotides K01465 - 3.5.2.3 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002418 531.0
DYD1_k127_6538091_1 Catalyzes a key regulatory step in fatty acid biosynthesis K00208 - 1.3.1.10,1.3.1.9 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004769 398.0
DYD1_k127_6538091_2 peptidylprolyl isomerase K03770 - 5.2.1.8 0.000000000000000000000000000000000000000000000000000000000000000418 231.0
DYD1_k127_6538091_3 Transcription factor that acts by binding directly to the RNA polymerase (RNAP). Required for negative regulation of rRNA expression and positive regulation of several amino acid biosynthesis promoters. Also required for regulation of fis expression K06204 - - 0.00000000000000000000000000000000000000000000000000000005121 199.0
DYD1_k127_6538091_4 Could be involved in insertion of integral membrane proteins into the membrane K08998 - - 0.000000000000000000000002616 105.0
DYD1_k127_6546839_0 The UvrABC repair system catalyzes the recognition and processing of DNA lesions. UvrA is an ATPase and a DNA-binding protein. A damage recognition complex composed of 2 UvrA and 2 UvrB subunits scans DNA for abnormalities. When the presence of a lesion has been verified by UvrB, the UvrA molecules dissociate K03701 - - 0.0 1472.0
DYD1_k127_6546839_1 Involved in peptidoglycan biosynthesis. Transports lipid-linked peptidoglycan precursors from the inner to the outer leaflet of the cytoplasmic membrane K03980 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001696 549.0
DYD1_k127_6546839_2 An essential GTPase which binds GTP, GDP and possibly (p)ppGpp with moderate affinity, with high nucleotide exchange rates and a fairly low GTP hydrolysis rate. Plays a role in control of the cell cycle, stress response, ribosome biogenesis and in those bacteria that undergo differentiation, in morphogenesis control K03979 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009592 443.0
DYD1_k127_6546839_3 This protein binds to 23S rRNA in the presence of protein L20 K02888 - - 0.0000000000000000000000000000000000000009926 156.0
DYD1_k127_6546839_4 Belongs to the bacterial ribosomal protein bL27 family K02899 GO:0003674,GO:0003735,GO:0005198,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0006412,GO:0006518,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0015934,GO:0019538,GO:0022625,GO:0022626,GO:0032991,GO:0034641,GO:0034645,GO:0043043,GO:0043170,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:0071704,GO:1901564,GO:1901566,GO:1901576,GO:1990904 - 0.00000000000000000000000000000000000000432 146.0
DYD1_k127_6546839_5 Binds directly to 16S ribosomal RNA K02968 - - 0.000000000000000000000001158 106.0
DYD1_k127_6546839_6 Belongs to the ribF family K11753 - 2.7.1.26,2.7.7.2 0.000000000000000002329 89.0
DYD1_k127_6555631_0 Subtilase family - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000039 516.0
DYD1_k127_6555631_1 NmrA-like family - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003698 388.0
DYD1_k127_6555631_2 pyrroloquinoline quinone binding - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004084 325.0
DYD1_k127_6555631_3 Cytochrome c - - - 0.00000000000000000000000000000000000000000000000000000000000000000000003604 246.0
DYD1_k127_6555631_4 Acetyl-CoA hydrolase/transferase C-terminal domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000001138 245.0
DYD1_k127_6555631_5 Transcriptional regulator, LysR family - - - 0.000000000000000000000000000000000000000000000000000000000000005791 228.0
DYD1_k127_6555631_6 Catalyzes the ATP-dependent transfer of a sulfur to tRNA to produce 4-thiouridine in position 8 of tRNAs, which functions as a near-UV photosensor. Also catalyzes the transfer of sulfur to the sulfur carrier protein ThiS, forming ThiS-thiocarboxylate. This is a step in the synthesis of thiazole, in the thiamine biosynthesis pathway. The sulfur is donated as persulfide by IscS - - - 0.0000000000003424 70.0
DYD1_k127_6578205_0 Predicted permease - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003647 553.0
DYD1_k127_6578205_1 Catalyzes the synthesis of 5,6-dihydrouridine (D), a modified base found in the D-loop of most tRNAs, via the reduction of the C5-C6 double bond in target uridines. Specifically modifies U20 and U20a in tRNAs K05539 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001069 400.0
DYD1_k127_6718732_0 Adenylyl- / guanylyl cyclase, catalytic domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002739 469.0
DYD1_k127_6718732_1 COG2303 Choline dehydrogenase and related flavoproteins K03333 - 1.1.3.6 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000001349 327.0
DYD1_k127_6718732_2 PhoD-like phosphatase - - - 0.0000000000000000000000000000000005545 151.0
DYD1_k127_6718732_3 D-arabinono-1,4-lactone oxidase K00103 - 1.1.3.8 0.00000000000000000000000000001281 134.0
DYD1_k127_6718732_4 Alpha/beta hydrolase family - - - 0.000000000000000003317 97.0
DYD1_k127_6718732_5 COGs COG5616 integral membrane protein - - - 0.0000004209 55.0
DYD1_k127_6752379_0 Critical role in recombination and DNA repair. Helps process Holliday junction intermediates to mature products by catalyzing branch migration. Has a DNA unwinding activity characteristic of a DNA helicase with a 3'- to 5'- polarity. Unwinds branched duplex DNA (Y-DNA) K03655 - 3.6.4.12 1.879e-251 794.0
DYD1_k127_6752379_1 Peptidase dimerisation domain - - - 4.356e-232 725.0
DYD1_k127_6752379_10 Glucose-regulated metallo-peptidase M90 K09933 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002226 331.0
DYD1_k127_6752379_11 Belongs to the DapA family K21062 - 3.5.4.22 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001367 312.0
DYD1_k127_6752379_12 FAD dependent oxidoreductase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004602 323.0
DYD1_k127_6752379_13 Catalyzes the condensation of ATP and 5-phosphoribose 1- diphosphate to form N'-(5'-phosphoribosyl)-ATP (PR-ATP). Has a crucial role in the pathway because the rate of histidine biosynthesis seems to be controlled primarily by regulation of HisG enzymatic activity K00765 GO:0000105,GO:0003674,GO:0003824,GO:0003879,GO:0006082,GO:0006520,GO:0006547,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0008652,GO:0009058,GO:0009987,GO:0016053,GO:0016740,GO:0016757,GO:0016763,GO:0018130,GO:0019438,GO:0019752,GO:0034641,GO:0043436,GO:0044237,GO:0044238,GO:0044249,GO:0044281,GO:0044283,GO:0046394,GO:0046483,GO:0052803,GO:0071704,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576,GO:1901605,GO:1901607 2.4.2.17 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000003836 295.0
DYD1_k127_6752379_14 stress-induced protein - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000001556 285.0
DYD1_k127_6752379_15 Belongs to the class-II pyridoxal-phosphate-dependent aminotransferase family. Histidinol-phosphate aminotransferase subfamily K00817 - 2.6.1.9 0.000000000000000000000000000000000000000000000000000000000000000000000000000000311 285.0
DYD1_k127_6752379_16 1-(5-phosphoribosyl)-5- (5-phosphoribosylamino)methylideneamino imidazole-4-carboxamide isomerase K01814 GO:0000105,GO:0000162,GO:0003674,GO:0003824,GO:0003949,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006082,GO:0006520,GO:0006547,GO:0006568,GO:0006576,GO:0006586,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0008652,GO:0009058,GO:0009072,GO:0009073,GO:0009308,GO:0009309,GO:0009987,GO:0016053,GO:0016853,GO:0016860,GO:0016861,GO:0018130,GO:0019438,GO:0019752,GO:0034641,GO:0042401,GO:0042430,GO:0042435,GO:0043436,GO:0044106,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0044283,GO:0044424,GO:0044464,GO:0046219,GO:0046394,GO:0046483,GO:0052803,GO:0071704,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576,GO:1901605,GO:1901607 5.3.1.16 0.00000000000000000000000000000000000000000000000000000000000000000000233 243.0
DYD1_k127_6752379_17 Histidine biosynthesis bifunctional protein HisIE K11755 - 3.5.4.19,3.6.1.31 0.0000000000000000000000000000000000000000000000000000000000000000003393 236.0
DYD1_k127_6752379_18 Essential for recycling GMP and indirectly, cGMP K00942 GO:0003674,GO:0003824,GO:0004385,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006139,GO:0006163,GO:0006725,GO:0006753,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009116,GO:0009117,GO:0009119,GO:0009123,GO:0009126,GO:0009132,GO:0009135,GO:0009150,GO:0009161,GO:0009165,GO:0009167,GO:0009179,GO:0009185,GO:0009259,GO:0009987,GO:0015949,GO:0016301,GO:0016310,GO:0016740,GO:0016772,GO:0016776,GO:0018130,GO:0019205,GO:0019438,GO:0019637,GO:0019693,GO:0034641,GO:0034654,GO:0042278,GO:0042802,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0044424,GO:0044444,GO:0044464,GO:0046037,GO:0046128,GO:0046483,GO:0046710,GO:0046940,GO:0050145,GO:0055086,GO:0071704,GO:0072521,GO:0090407,GO:1901068,GO:1901135,GO:1901293,GO:1901360,GO:1901362,GO:1901564,GO:1901576,GO:1901657 2.7.4.8 0.00000000000000000000000000000000000000000000000000000000000000006574 231.0
DYD1_k127_6752379_19 IGPS catalyzes the conversion of PRFAR and glutamine to IGP, AICAR and glutamate. The HisH subunit provides the glutamine amidotransferase activity that produces the ammonia necessary to HisF for the synthesis of IGP and AICAR K02501 - - 0.0000000000000000000000000000000000000000000000000000000000000003536 232.0
DYD1_k127_6752379_2 In eubacteria ppGpp (guanosine 3'-diphosphate 5-' diphosphate) is a mediator of the stringent response that coordinates a variety of cellular activities in response to changes in nutritional abundance K01139 - 2.7.6.5,3.1.7.2 5.863e-231 737.0
DYD1_k127_6752379_20 endoribonuclease - - - 0.0000000000000000000000000000000000000000000000001594 179.0
DYD1_k127_6752379_21 mannose-6-phosphate isomerase - - - 0.00000000000000000000000000000000000000000000001538 174.0
DYD1_k127_6752379_22 Polyketide cyclase / dehydrase and lipid transport - - - 0.000000000000000000000000000000000000002051 153.0
DYD1_k127_6752379_23 Domain of unknown function (DUF4399) - - - 0.00000000000000000000000000000000000001802 156.0
DYD1_k127_6752379_24 Transcriptional regulator - - - 0.000000000000000000000000000000000001347 147.0
DYD1_k127_6752379_25 Inactivates the type B streptogramin antibiotics by linearizing the lactone ring at the ester linkage, generating a free phenylglycine carboxylate and converting the threonyl moiety into 2-amino-butenoic acid K18235 - - 0.0000000000000000000000000000000001669 134.0
DYD1_k127_6752379_26 protein, YerC YecD - - - 0.0000000000000000000000000002161 117.0
DYD1_k127_6752379_27 Promotes RNA polymerase assembly. Latches the N- and C- terminal regions of the beta' subunit thereby facilitating its interaction with the beta and alpha subunits K03060 - 2.7.7.6 0.0000000000000000000000006944 106.0
DYD1_k127_6752379_28 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily K01759 GO:0008150,GO:0010035,GO:0010038,GO:0042221,GO:0046686,GO:0050896 4.4.1.5 0.0000000000000000000004997 100.0
DYD1_k127_6752379_29 Transcriptional regulator - - - 0.0000000000000000001865 94.0
DYD1_k127_6752379_3 Bacterial protein of unknown function (DUF885) - - - 8.231e-200 641.0
DYD1_k127_6752379_30 - - - - 0.000000000000000001799 94.0
DYD1_k127_6752379_31 - - - - 0.000000000000000002754 94.0
DYD1_k127_6752379_4 Transporter K03305 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007705 593.0
DYD1_k127_6752379_5 protein conserved in bacteria - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006235 569.0
DYD1_k127_6752379_6 Belongs to the proline racemase family K12658 - 5.1.1.8 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005788 463.0
DYD1_k127_6752379_7 Histidine biosynthesis bifunctional protein HisB K01089 GO:0000105,GO:0003674,GO:0003824,GO:0004424,GO:0006082,GO:0006520,GO:0006547,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0008652,GO:0009058,GO:0009987,GO:0016053,GO:0016829,GO:0016835,GO:0016836,GO:0018130,GO:0019438,GO:0019752,GO:0034641,GO:0043436,GO:0044237,GO:0044238,GO:0044249,GO:0044281,GO:0044283,GO:0046394,GO:0046483,GO:0052803,GO:0071704,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576,GO:1901605,GO:1901607 3.1.3.15,4.2.1.19 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002618 447.0
DYD1_k127_6752379_8 Catalyzes the sequential NAD-dependent oxidations of L- histidinol to L-histidinaldehyde and then to L-histidine K00013 GO:0000105,GO:0003674,GO:0003824,GO:0004399,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006082,GO:0006520,GO:0006547,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0008652,GO:0009058,GO:0009987,GO:0016053,GO:0016491,GO:0016614,GO:0016616,GO:0018130,GO:0019438,GO:0019752,GO:0034641,GO:0043436,GO:0044237,GO:0044238,GO:0044249,GO:0044281,GO:0044283,GO:0044424,GO:0044444,GO:0044464,GO:0046394,GO:0046483,GO:0052803,GO:0055114,GO:0071704,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576,GO:1901605,GO:1901607 1.1.1.23 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001151 444.0
DYD1_k127_6752379_9 IGPS catalyzes the conversion of PRFAR and glutamine to IGP, AICAR and glutamate. The HisF subunit catalyzes the cyclization activity that produces IGP and AICAR from PRFAR using the ammonia provided by the HisH subunit K02500 GO:0000107,GO:0003674,GO:0003824,GO:0016740,GO:0016757,GO:0016763 - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002106 365.0
DYD1_k127_6764067_0 Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released. This sigma factor is the primary sigma factor during exponential growth K03086 GO:0000988,GO:0000990,GO:0003674,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006139,GO:0006351,GO:0006352,GO:0006355,GO:0006725,GO:0006807,GO:0006950,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009266,GO:0009408,GO:0009628,GO:0009889,GO:0009987,GO:0010467,GO:0010468,GO:0010556,GO:0016070,GO:0016987,GO:0018130,GO:0019219,GO:0019222,GO:0019438,GO:0031323,GO:0031326,GO:0032774,GO:0034641,GO:0034645,GO:0034654,GO:0043170,GO:0043254,GO:0044087,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044271,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0050789,GO:0050794,GO:0050896,GO:0051128,GO:0051171,GO:0051252,GO:0060255,GO:0065007,GO:0071704,GO:0080090,GO:0090304,GO:0097659,GO:0140110,GO:1901360,GO:1901362,GO:1901576,GO:1903506,GO:2000112,GO:2000142,GO:2001141 - 7.872e-234 739.0
DYD1_k127_6764067_1 RNA polymerase that catalyzes the synthesis of short RNA molecules used as primers for DNA polymerase during DNA replication K02316 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003843 572.0
DYD1_k127_6764067_2 Gamma-glutamyltranspeptidase K00681 - 2.3.2.2,3.4.19.13 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001718 492.0
DYD1_k127_6764067_3 Required for the formation of a threonylcarbamoyl group on adenosine at position 37 (t(6)A37) in tRNAs that read codons beginning with adenine. Is involved in the transfer of the threonylcarbamoyl moiety of threonylcarbamoyl-AMP (TC-AMP) to the N6 group of A37, together with TsaE and TsaB. TsaD likely plays a direct catalytic role in this reaction K01409 - 2.3.1.234 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002 464.0
DYD1_k127_6764067_4 Catalyzes the conversion of 7,8-dihydroneopterin to 6- hydroxymethyl-7,8-dihydropterin K01633 - 1.13.11.81,4.1.2.25,5.1.99.8 0.000000000000000000000000000000000000000000000002867 175.0
DYD1_k127_6764067_5 Yqey-like protein K09117 - - 0.0000000000000000000000000000000000000000005139 166.0
DYD1_k127_6764067_6 2-amino-4-hydroxy-6-hydroxymethyldihydropteridine pyrophosphokinase K00950 - 2.7.6.3 0.0000000000000000000000000000000000000000008086 168.0
DYD1_k127_6764067_7 Belongs to the bacterial ribosomal protein bS21 family K02970 GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005840,GO:0032991,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044446,GO:0044464,GO:1990904 - 0.0000000000000000000000000000001954 123.0
DYD1_k127_6764067_8 COG1028 Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) K03793 - 1.5.1.33 0.000000000000202 70.0
DYD1_k127_6764067_9 cAMP biosynthetic process - - - 0.0002378 45.0
DYD1_k127_6781263_0 Belongs to the heme-copper respiratory oxidase family K04561 - 1.7.2.5 4.908e-217 681.0
DYD1_k127_6781263_1 PFAM von Willebrand factor type A K02448 - - 1.327e-195 632.0
DYD1_k127_6781263_10 PFAM peptidase M48 Ste24p - - - 0.0000000000000000000000000000000000000000000000000000000000000000203 233.0
DYD1_k127_6781263_11 COG1047 FKBP-type peptidyl-prolyl cis-trans isomerases 2 K03775 - 5.2.1.8 0.0000000000000000000000000000000000000000000000000000000000128 209.0
DYD1_k127_6781263_12 COG0526 Thiol-disulfide isomerase and thioredoxins K02199 GO:0003674,GO:0003756,GO:0003824,GO:0005575,GO:0005623,GO:0005886,GO:0008150,GO:0008152,GO:0009897,GO:0009986,GO:0009987,GO:0015036,GO:0016020,GO:0016043,GO:0016491,GO:0016667,GO:0016853,GO:0016860,GO:0016864,GO:0017004,GO:0022607,GO:0031224,GO:0031226,GO:0031233,GO:0031237,GO:0034622,GO:0043933,GO:0044085,GO:0044425,GO:0044459,GO:0044464,GO:0055114,GO:0065003,GO:0071840,GO:0071944,GO:0098552,GO:0098567,GO:0140096 - 0.00000000000000000000000000000000000000000000000000007419 191.0
DYD1_k127_6781263_13 Tetratricopeptide repeat K02200 - - 0.0000000000000000000000000000000000000000001989 171.0
DYD1_k127_6781263_14 Type II secretion system (T2SS), protein F K02455 - - 0.0000000000000000000000000000000000003554 153.0
DYD1_k127_6781263_15 subunit of a heme lyase K02200 GO:0003674,GO:0003824,GO:0005575,GO:0005623,GO:0005886,GO:0008150,GO:0008152,GO:0009897,GO:0009986,GO:0009987,GO:0015035,GO:0015036,GO:0016020,GO:0016043,GO:0016491,GO:0016667,GO:0017004,GO:0022607,GO:0031224,GO:0031226,GO:0031233,GO:0031237,GO:0034622,GO:0043933,GO:0044085,GO:0044425,GO:0044459,GO:0044464,GO:0055114,GO:0065003,GO:0071840,GO:0071944,GO:0098552,GO:0098567 - 0.00000000000000000000000000000000002819 138.0
DYD1_k127_6781263_16 HEAT repeats - - - 0.0000000000000000000000009007 120.0
DYD1_k127_6781263_17 Cysteine desulfurases mobilize the sulfur from L- cysteine to yield L-alanine, an essential step in sulfur metabolism for biosynthesis of a variety of sulfur-containing biomolecules. Component of the suf operon, which is activated and required under specific conditions such as oxidative stress and iron limitation. Acts as a potent selenocysteine lyase in vitro, that mobilizes selenium from L-selenocysteine. Selenocysteine lyase activity is however unsure in vivo - - - 0.000000000000000000001094 94.0
DYD1_k127_6781263_18 Sigma-70, region 4 K03088 - - 0.00000001412 60.0
DYD1_k127_6781263_2 Bacterial protein of unknown function (DUF885) - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001088 531.0
DYD1_k127_6781263_3 twitching motility protein K02670 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002451 413.0
DYD1_k127_6781263_4 PFAM ATPase associated with various cellular activities, AAA_5 K04748 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008189 412.0
DYD1_k127_6781263_5 polyphosphate kinase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001122 358.0
DYD1_k127_6781263_6 Protein of unknown function (DUF1326) - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002144 314.0
DYD1_k127_6781263_7 DNA polymerase Ligase (LigD) - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000001357 253.0
DYD1_k127_6781263_8 Predicted metal-binding integral membrane protein (DUF2182) - - - 0.000000000000000000000000000000000000000000000000000000000000000000000001048 254.0
DYD1_k127_6781263_9 Cytochrome c K02305 - - 0.00000000000000000000000000000000000000000000000000000000000000000000007523 243.0
DYD1_k127_6801230_0 Tryptophanyl-tRNA synthetase K01867 - 6.1.1.2 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001843 484.0
DYD1_k127_6801230_1 Activates the expression of a regulon of hydrogen peroxide-inducible genes such as katG, gor, ahpC, ahpF, oxyS, dps, fur and grxA K04761 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002314 378.0
DYD1_k127_6801230_2 Belongs to the UPF0176 family K07146 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002144 362.0
DYD1_k127_6801230_3 - - - - 0.000000000000000000000000007626 123.0
DYD1_k127_6801230_4 mechanosensitive ion channel - - - 0.00000000000000000000000003265 117.0
DYD1_k127_6801230_5 negative regulation of translational initiation - - - 0.0000000073 67.0
DYD1_k127_6803984_0 Part of a stress-induced multi-chaperone system, it is involved in the recovery of the cell from heat-induced damage, in cooperation with DnaK, DnaJ and GrpE K03695 - - 0.0 1315.0
DYD1_k127_6803984_1 COG0488 ATPase components of ABC transporters with duplicated ATPase domains K15738 GO:0003674,GO:0003676,GO:0003677,GO:0003824,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005886,GO:0008150,GO:0009314,GO:0009628,GO:0010528,GO:0016020,GO:0016462,GO:0016787,GO:0016817,GO:0016818,GO:0016887,GO:0017111,GO:0019219,GO:0019222,GO:0031323,GO:0044424,GO:0044464,GO:0050789,GO:0050794,GO:0050896,GO:0051052,GO:0051171,GO:0060255,GO:0065007,GO:0070894,GO:0071944,GO:0080090,GO:0097159,GO:1901363 - 1.919e-259 810.0
DYD1_k127_6803984_2 Cyclic nucleotide-monophosphate binding domain - - - 0.00000000009996 62.0
DYD1_k127_6805278_0 Catalyzes the hydrolysis of inorganic pyrophosphate (PPi) forming two phosphate ions K01507 GO:0000287,GO:0003674,GO:0003824,GO:0004427,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006793,GO:0008150,GO:0008152,GO:0008270,GO:0009987,GO:0016462,GO:0016787,GO:0016817,GO:0016818,GO:0043167,GO:0043169,GO:0044237,GO:0044424,GO:0044444,GO:0044464,GO:0046872,GO:0046914,GO:0050355 3.6.1.1 0.0000000000000000000000000000000000000000000000000000000000000000000000000000005005 267.0
DYD1_k127_6805278_1 Polysaccharide deacetylase - - - 0.00000000000000000000000000000000000000000000000000000000004207 214.0
DYD1_k127_6805278_2 COG2939 Carboxypeptidase C (cathepsin A) - - - 0.000000000000000000000000000000132 128.0
DYD1_k127_6805278_3 Protein of unknown function (DUF1698) K15257 - - 0.0000000000000002081 92.0
DYD1_k127_6812371_0 Aldehyde dehydrogenase family K00294 - 1.2.1.88 2.399e-227 715.0
DYD1_k127_6812371_1 Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family K15372 - 2.6.1.55 1.462e-202 638.0
DYD1_k127_6812371_2 K COG5665 CCR4-NOT transcriptional regulation complex, NOT5 subunit - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001193 495.0
DYD1_k127_6812371_3 Acyl CoA acetate 3-ketoacid CoA transferase, alpha subunit K01039 - 2.8.3.12 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002315 372.0
DYD1_k127_6812371_4 Acyl CoA acetate 3-ketoacid CoA transferase beta subunit K01040 - 2.8.3.12 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001414 357.0
DYD1_k127_6812371_5 Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family K00823 - 2.6.1.19 0.0000000000000000000000000000000000000000000000000000000000000000000000000000003873 270.0
DYD1_k127_6812371_6 Thiol oxidoreductase - - - 0.0000000000000000000000000000000000000000000000000000000000000000001058 249.0
DYD1_k127_682063_0 DEAD-box RNA helicase involved in ribosome assembly. Has RNA-dependent ATPase activity and unwinds double-stranded RNA K11927 GO:0003674,GO:0003724,GO:0003824,GO:0004004,GO:0004386,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006139,GO:0006725,GO:0006807,GO:0006950,GO:0006996,GO:0008026,GO:0008150,GO:0008152,GO:0008186,GO:0009266,GO:0009408,GO:0009628,GO:0009987,GO:0010501,GO:0016043,GO:0016070,GO:0016462,GO:0016787,GO:0016817,GO:0016818,GO:0016887,GO:0017111,GO:0022607,GO:0022613,GO:0022618,GO:0034622,GO:0034641,GO:0042254,GO:0042255,GO:0042623,GO:0043170,GO:0043933,GO:0044085,GO:0044237,GO:0044238,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0050896,GO:0065003,GO:0070035,GO:0070925,GO:0071704,GO:0071826,GO:0071840,GO:0090304,GO:0140098,GO:1901360 3.6.4.13 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006573 589.0
DYD1_k127_682063_1 Fatty acid desaturase K10255 - 1.14.19.23,1.14.19.45 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000675 437.0
DYD1_k127_682063_2 Amidohydrolase family - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000005892 303.0
DYD1_k127_682063_3 AAA domain K07133 - - 0.00000000000000000000000000000001135 128.0
DYD1_k127_682063_4 PFAM Cold-shock protein, DNA-binding K03704 - - 0.0000000000000000000000000003218 114.0
DYD1_k127_682063_5 - - - - 0.000005885 53.0
DYD1_k127_6856667_0 COG1194 A G-specific DNA glycosylase K03575 GO:0003674,GO:0003824,GO:0006139,GO:0006259,GO:0006281,GO:0006284,GO:0006725,GO:0006807,GO:0006950,GO:0006974,GO:0008150,GO:0008152,GO:0009987,GO:0016787,GO:0033554,GO:0034641,GO:0043170,GO:0044237,GO:0044238,GO:0044260,GO:0046483,GO:0050896,GO:0051716,GO:0071704,GO:0090304,GO:1901360 - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002543 368.0
DYD1_k127_6856667_1 Tetratricopeptide TPR_2 repeat protein - - - 0.00000000000000000000000000000000000000000000000000000000000001268 237.0
DYD1_k127_6856667_2 Extracellular nuclease - - - 0.00000000000000000001844 108.0
DYD1_k127_6856667_4 PFAM sigma-70 region 2 domain protein K03088 - - 0.00000000000000008707 89.0
DYD1_k127_6856667_5 Involved in targeting and insertion of nascent membrane proteins into the cytoplasmic membrane. Acts as a receptor for the complex formed by the signal recognition particle (SRP) and the ribosome-nascent chain (RNC). Interaction with SRP-RNC leads to the transfer of the RNC complex to the Sec translocase for insertion into the membrane, the hydrolysis of GTP by both Ffh and FtsY, and the dissociation of the SRP-FtsY complex into the individual components K03110 GO:0000166,GO:0001882,GO:0001883,GO:0003674,GO:0003824,GO:0003924,GO:0005488,GO:0005525,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005886,GO:0006605,GO:0006612,GO:0006613,GO:0006614,GO:0006810,GO:0006886,GO:0008104,GO:0008150,GO:0015031,GO:0015833,GO:0016020,GO:0016462,GO:0016787,GO:0016817,GO:0016818,GO:0017076,GO:0017111,GO:0019001,GO:0019897,GO:0019898,GO:0031224,GO:0031226,GO:0032549,GO:0032550,GO:0032553,GO:0032555,GO:0032561,GO:0033036,GO:0033365,GO:0034613,GO:0035639,GO:0036094,GO:0042886,GO:0043167,GO:0043168,GO:0044424,GO:0044425,GO:0044444,GO:0044459,GO:0044464,GO:0045047,GO:0045184,GO:0046907,GO:0051179,GO:0051234,GO:0051641,GO:0051649,GO:0070727,GO:0070972,GO:0071702,GO:0071705,GO:0071944,GO:0072594,GO:0072599,GO:0072657,GO:0090150,GO:0097159,GO:0097367,GO:1901265,GO:1901363 - 0.00000001333 56.0
DYD1_k127_6890919_0 Succinyl-CoA synthetase functions in the citric acid cycle (TCA), coupling the hydrolysis of succinyl-CoA to the synthesis of either ATP or GTP and thus represents the only step of substrate-level phosphorylation in the TCA. The beta subunit provides nucleotide specificity of the enzyme and binds the substrate succinate, while the binding sites for coenzyme A and phosphate are found in the alpha subunit K01903 - 6.2.1.5 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005238 541.0
DYD1_k127_6890919_1 Succinyl-CoA synthetase functions in the citric acid cycle (TCA), coupling the hydrolysis of succinyl-CoA to the synthesis of either ATP or GTP and thus represents the only step of substrate-level phosphorylation in the TCA. The alpha subunit of the enzyme binds the substrates coenzyme A and phosphate, while succinate binding and nucleotide specificity is provided by the beta subunit K01902 - 6.2.1.5 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002901 455.0
DYD1_k127_6890919_2 response regulator receiver K02667 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000373 314.0
DYD1_k127_6890919_3 Histidine kinase K02668 - 2.7.13.3 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000001812 295.0
DYD1_k127_6890919_4 Catalyzes the ATP-dependent amidation of deamido-NAD to form NAD. Uses K01916,K01950 - 6.3.1.5,6.3.5.1 0.000000000000000000000000000000000000001005 151.0
DYD1_k127_6932345_0 Catalyzes the hydroxylation of L-kynurenine (L-Kyn) to form 3-hydroxy-L-kynurenine (L-3OHKyn). Required for synthesis of quinolinic acid K00486 GO:0003674,GO:0003824,GO:0004497,GO:0008150,GO:0008152,GO:0009058,GO:0016491,GO:0019748,GO:0044550,GO:0055114 1.14.13.9 0.00000000000000000000000000000000000000000000000000000000000000000000000000001097 268.0
DYD1_k127_6932345_1 Subtilase family - - - 0.0000000000000000000000000000000000000000000001008 187.0
DYD1_k127_6963050_0 amidohydrolase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000334 526.0
DYD1_k127_6963050_1 protein related to capsule biosynthesis enzymes K07154 - 2.7.11.1 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005599 348.0
DYD1_k127_6963050_2 Glucose sorbosone K21430 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002928 340.0
DYD1_k127_6963050_3 Beta-lactamase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000001162 301.0
DYD1_k127_6963050_4 6-phosphogluconolactonase activity - - - 0.000000001932 63.0
DYD1_k127_6963050_5 Helix-turn-helix XRE-family like proteins - - - 0.00000005622 57.0
DYD1_k127_6963050_6 Methyltransferase - - - 0.00008324 53.0
DYD1_k127_698231_0 Required for the insertion and or proper folding and or complex formation of integral membrane proteins into the membrane. Involved in integration of membrane proteins that insert both dependently and independently of the Sec translocase complex, as well as at least some lipoproteins. Aids folding of multispanning membrane proteins K03217 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006031 544.0
DYD1_k127_698231_1 it binds specifically double-stranded DNA at a 9 bp consensus (dnaA box) 5'-TTATC CA A CA A-3'. DnaA binds to ATP and to acidic phospholipids K02313 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006922 537.0
DYD1_k127_698231_2 Exhibits a very high intrinsic GTPase hydrolysis rate. Involved in the addition of a carboxymethylaminomethyl (cmnm) group at the wobble position (U34) of certain tRNAs, forming tRNA- cmnm(5)s(2)U34 K03650 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004623 476.0
DYD1_k127_698231_3 Confers DNA tethering and processivity to DNA polymerases and other proteins. Acts as a clamp, forming a ring around DNA (a reaction catalyzed by the clamp-loading complex) which diffuses in an ATP-independent manner freely and bidirectionally along dsDNA. Initially characterized for its ability to contact the catalytic subunit of DNA polymerase III (Pol III), a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria K02338 - 2.7.7.7 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003067 439.0
DYD1_k127_698231_4 it is required for DNA replication and normal SOS inducibility. RecF binds preferentially to single-stranded, linear DNA. It also seems to bind ATP K03629 GO:0000731,GO:0006139,GO:0006259,GO:0006281,GO:0006302,GO:0006725,GO:0006807,GO:0006950,GO:0006974,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0018130,GO:0019438,GO:0033554,GO:0034641,GO:0034645,GO:0034654,GO:0043170,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044271,GO:0046483,GO:0050896,GO:0051716,GO:0071704,GO:0071897,GO:0090304,GO:1901360,GO:1901362,GO:1901576 - 0.000000000000000000000000000000000000000000000000000000000000000000000000000366 268.0
DYD1_k127_698231_5 A type II topoisomerase that negatively supercoils closed circular double-stranded (ds) DNA in an ATP-dependent manner to modulate DNA topology and maintain chromosomes in an underwound state. Negative supercoiling favors strand separation, and DNA replication, transcription, recombination and repair, all of which involve strand separation. Also able to catalyze the interconversion of other topological isomers of dsDNA rings, including catenanes and knotted rings. Type II topoisomerases break and join 2 DNA strands simultaneously in an ATP-dependent manner K02470 - 5.99.1.3 0.0000000000000003651 78.0
DYD1_k127_698231_6 RNaseP catalyzes the removal of the 5'-leader sequence from pre-tRNA to produce the mature 5'-terminus. It can also cleave other RNA substrates such as 4.5S RNA. The protein component plays an auxiliary but essential role in vivo by binding to the 5'-leader sequence and broadening the substrate specificity of the ribozyme K03536 - 3.1.26.5 0.000000000000001477 83.0
DYD1_k127_698231_7 Belongs to the bacterial ribosomal protein bL34 family K02914 - - 0.0000000000000266 73.0
DYD1_k127_698231_8 - - - - 0.000001769 57.0
DYD1_k127_6994951_0 AMP-binding enzyme K22319 - 6.1.3.1 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003493 469.0
DYD1_k127_6994951_1 3-beta hydroxysteroid dehydrogenase/isomerase family K16045,K22320 GO:0000166,GO:0003674,GO:0003824,GO:0003854,GO:0004769,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005886,GO:0006629,GO:0008150,GO:0008152,GO:0008202,GO:0016020,GO:0016229,GO:0016491,GO:0016614,GO:0016616,GO:0016853,GO:0016860,GO:0016863,GO:0030283,GO:0033764,GO:0036094,GO:0043167,GO:0043168,GO:0044238,GO:0044424,GO:0044444,GO:0044464,GO:0048037,GO:0050662,GO:0051287,GO:0055114,GO:0070403,GO:0071704,GO:0071944,GO:0097159,GO:1901265,GO:1901360,GO:1901363 1.1.1.145,1.1.1.412,5.3.3.1 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001514 309.0
DYD1_k127_6994951_2 Acetyltransferase (GNAT) family - - - 0.0000000002899 61.0
DYD1_k127_702852_0 Sulfatase-modifying factor enzyme 1 - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001036 436.0
DYD1_k127_702852_1 Exonuclease involved in the 3' processing of various precursor tRNAs. Initiates hydrolysis at the 3'-terminus of an RNA molecule and releases 5'-mononucleotides K03684 - 3.1.13.5 0.0000000000000000000000000000000000000000000000000000000000000000002905 243.0
DYD1_k127_702852_2 Sarcosine oxidase, gamma subunit K00305 - 1.5.3.1 0.00004851 50.0
DYD1_k127_732225_0 Belongs to the aldehyde dehydrogenase family K00154 - 1.2.1.68 1.308e-200 634.0
DYD1_k127_732225_1 dienelactone hydrolase K01061 - 3.1.1.45 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004537 450.0
DYD1_k127_732225_2 transport system, permease component K02069 - - 0.0000000000000000000000000000000000000000000000000000000000000000001275 241.0
DYD1_k127_732225_3 3-oxo-5-alpha-steroid 4-dehydrogenase K12343 - 1.3.1.22 0.00000000000000000000000000000000000000000000000000000000000000001731 234.0
DYD1_k127_732225_4 Major Facilitator - - - 0.0000000000000000000000000000000000000000000000000885 196.0
DYD1_k127_732225_5 Amidinotransferase - - - 0.0000000000000000000000000000000000000004707 162.0
DYD1_k127_732225_6 Amidohydrolase family K01464 - 3.5.2.2 0.000000000000000648 78.0
DYD1_k127_797044_0 Male sterility protein - - - 1.577e-299 930.0
DYD1_k127_797044_1 receptor - - - 1.728e-260 833.0
DYD1_k127_797044_10 Belongs to the folylpolyglutamate synthase family K11754 - 6.3.2.12,6.3.2.17 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006079 363.0
DYD1_k127_797044_11 Aspartyl/Asparaginyl beta-hydroxylase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001016 338.0
DYD1_k127_797044_12 Formation of pseudouridine at positions 38, 39 and 40 in the anticodon stem and loop of transfer RNAs K06173 - 5.4.99.12 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001221 326.0
DYD1_k127_797044_13 The alpha subunit is responsible for the aldol cleavage of indoleglycerol phosphate to indole and glyceraldehyde 3- phosphate K01695 - 4.2.1.20 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000001839 302.0
DYD1_k127_797044_14 Specifically methylates the 50S ribosomal protein L3 on a specific glutamine residue K07320 - 2.1.1.298 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000004836 303.0
DYD1_k127_797044_15 Tetratricopeptide repeat - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000008094 286.0
DYD1_k127_797044_16 Belongs to the phosphatidylserine decarboxylase family. PSD-B subfamily. Prokaryotic type I sub-subfamily K01613 - 4.1.1.65 0.0000000000000000000000000000000000000000000000000000000000000000000000002479 263.0
DYD1_k127_797044_17 Belongs to the TrpF family K01817 - 5.3.1.24 0.0000000000000000000000000000000000000000000000000000000001428 209.0
DYD1_k127_797044_18 PFAM Colicin V production protein K03558 - - 0.00000000000000000000000000000000000000000001694 168.0
DYD1_k127_797044_19 transcriptional regulator - - - 0.00000000000000000000000000000000000001286 154.0
DYD1_k127_797044_2 COG0457 FOG TPR repeat - - - 3.972e-233 739.0
DYD1_k127_797044_20 COG1846 Transcriptional regulators - - - 0.0000000000000000000000000000000000001738 148.0
DYD1_k127_797044_21 Tfp pilus assembly protein FimV K08086 - - 0.00000000000000000000000000000000001224 156.0
DYD1_k127_797044_22 protein conserved in bacteria - - - 0.000000000000000000000000000003683 132.0
DYD1_k127_797044_23 Acyl CoA binding protein - - - 0.00000000000000000000000001223 128.0
DYD1_k127_797044_24 Poly(hydroxyalcanoate) granule associated protein - - - 0.0000000000000000000002115 108.0
DYD1_k127_797044_25 COG3170 Tfp pilus assembly protein FimV K08086 - - 0.00005692 56.0
DYD1_k127_797044_3 PFAM peptidase M2, peptidyl-dipeptidase A K01283 - 3.4.15.1 1.531e-226 709.0
DYD1_k127_797044_4 Catalyzes the formation of phosphoribosylamine from phosphoribosylpyrophosphate (PRPP) and glutamine K00764 - 2.4.2.14 3.683e-214 675.0
DYD1_k127_797044_5 The beta subunit is responsible for the synthesis of L- tryptophan from indole and L-serine K01696 - 4.2.1.20 5.515e-199 626.0
DYD1_k127_797044_6 Catalyzes the anti-1,4-elimination of the C-3 phosphate and the C-6 proR hydrogen from 5-enolpyruvylshikimate-3-phosphate (EPSP) to yield chorismate, which is the branch point compound that serves as the starting substrate for the three terminal pathways of aromatic amino acid biosynthesis. This reaction introduces a second double bond into the aromatic ring system K01736 GO:0000166,GO:0003674,GO:0003824,GO:0004107,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006082,GO:0006520,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0008652,GO:0009058,GO:0009072,GO:0009073,GO:0009423,GO:0009987,GO:0010181,GO:0016053,GO:0016829,GO:0016835,GO:0016838,GO:0019438,GO:0019752,GO:0032553,GO:0036094,GO:0043167,GO:0043168,GO:0043436,GO:0043648,GO:0043650,GO:0044237,GO:0044238,GO:0044249,GO:0044281,GO:0044283,GO:0044424,GO:0044444,GO:0044464,GO:0046394,GO:0046417,GO:0048037,GO:0050662,GO:0071704,GO:0097159,GO:0097367,GO:1901265,GO:1901360,GO:1901362,GO:1901363,GO:1901564,GO:1901566,GO:1901576 4.2.3.5 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002025 531.0
DYD1_k127_797044_7 Protein of unknown function (DUF1298) - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000464 533.0
DYD1_k127_797044_8 Component of the acetyl coenzyme A carboxylase (ACC) complex. Biotin carboxylase (BC) catalyzes the carboxylation of biotin on its carrier protein (BCCP) and then the CO(2) group is transferred by the transcarboxylase to acetyl-CoA to form malonyl- CoA K01963 - 2.1.3.15,6.4.1.2 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004549 406.0
DYD1_k127_797044_9 Catalyzes the NADPH-dependent formation of L-aspartate- semialdehyde (L-ASA) by the reductive dephosphorylation of L- aspartyl-4-phosphate K00133 - 1.2.1.11 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000289 405.0
DYD1_k127_8239_0 COG1629 Outer membrane receptor proteins, mostly Fe transport - - - 0.0 1048.0
DYD1_k127_8239_1 Domain of unknown function (DUF4287) - - - 0.0000000000000000000000000000000000000000000000000000000000000000001517 234.0
DYD1_k127_8239_2 Flavodoxin-like fold - - - 0.000000000000000000000000000000000000000000000000000000000000003843 221.0
DYD1_k127_8239_3 Protein of unknown function (DUF1211) - - - 0.00000000000000000000000000000000000000000000000006766 186.0
DYD1_k127_8239_4 Protein of unknown function (DUF1761) - - - 0.000000000000000000000000000000000000000001384 160.0
DYD1_k127_8239_5 Cro/C1-type HTH DNA-binding domain - - - 0.0000000000000000000000000000000000000003289 154.0
DYD1_k127_8239_6 helix_turn_helix, arabinose operon control protein - - - 0.00000000000000000000000000000000000007595 154.0
DYD1_k127_8239_7 Could be a mediator in iron transactions between iron acquisition and iron-requiring processes, such as synthesis and or repair of Fe-S clusters in biosynthetic enzymes - - - 0.00000000000000000000000000000000006774 135.0
DYD1_k127_856468_0 ATPase, P-type (transporting), HAD superfamily, subfamily IC K01533 - 3.6.3.4 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001313 615.0
DYD1_k127_856468_1 Conserved region in glutamate synthase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001422 589.0
DYD1_k127_856468_2 TIGRFAM cytochrome c oxidase accessory protein - - - 0.00000000000000000000000000000000000000000000000000003676 193.0
DYD1_k127_856468_3 biogenesis protein K09792 - - 0.0000000000000000000000000000001033 136.0
DYD1_k127_856468_4 Cytochrome oxidase maturation protein - - - 0.00000000002955 71.0
DYD1_k127_856468_5 - - - - 0.000000001959 66.0
DYD1_k127_856468_6 FixH K09926 - - 0.000000004458 61.0
DYD1_k127_856468_8 Cupin 2, conserved barrel domain protein - - - 0.000002815 57.0
DYD1_k127_924641_0 Sortilin, neurotensin receptor 3, - - - 0.0 1065.0
DYD1_k127_924641_1 ABC transporter K06020 GO:0003674,GO:0003824,GO:0005488,GO:0006417,GO:0006448,GO:0008150,GO:0009889,GO:0009890,GO:0009892,GO:0010468,GO:0010556,GO:0010558,GO:0010605,GO:0010608,GO:0010629,GO:0016462,GO:0016787,GO:0016817,GO:0016818,GO:0016887,GO:0017111,GO:0017148,GO:0019222,GO:0031323,GO:0031324,GO:0031326,GO:0031327,GO:0032268,GO:0032269,GO:0034248,GO:0034249,GO:0043021,GO:0043022,GO:0044877,GO:0045900,GO:0048519,GO:0048523,GO:0050789,GO:0050794,GO:0051171,GO:0051172,GO:0051246,GO:0051248,GO:0060255,GO:0065007,GO:0080090,GO:2000112,GO:2000113 3.6.3.25 2.592e-309 953.0
DYD1_k127_924641_2 Glutamine synthetase, catalytic domain K01915 - 6.3.1.2 2.877e-207 654.0
DYD1_k127_924641_3 Fic/DOC family - - - 1.295e-204 649.0
DYD1_k127_924641_4 Aldo/keto reductase family - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000135 430.0
DYD1_k127_924641_5 inositol 2-dehydrogenase activity - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000002859 309.0
DYD1_k127_924641_6 Putative esterase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000231 260.0
DYD1_k127_924641_7 Belongs to the UPF0502 family K09915 - - 0.00000000000000000001844 94.0
DYD1_k127_924641_8 Tetratricopeptide TPR_2 repeat protein - - - 0.000009123 59.0
DYD1_k127_929503_0 oligopeptide transporter - - - 5.558e-254 796.0
DYD1_k127_929503_1 TonB-dependent receptor - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001104 366.0
DYD1_k127_965877_0 COG2204 Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains K07715 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002969 509.0
DYD1_k127_965877_1 Carbohydrate phosphorylase K00688 GO:0000272,GO:0003674,GO:0003824,GO:0004645,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005975,GO:0005976,GO:0005977,GO:0005980,GO:0006073,GO:0006091,GO:0006112,GO:0008144,GO:0008150,GO:0008152,GO:0008184,GO:0009056,GO:0009057,GO:0009251,GO:0009987,GO:0015980,GO:0016052,GO:0016740,GO:0016757,GO:0016758,GO:0019842,GO:0030170,GO:0036094,GO:0043167,GO:0043168,GO:0043170,GO:0044042,GO:0044237,GO:0044238,GO:0044247,GO:0044248,GO:0044260,GO:0044262,GO:0044264,GO:0044275,GO:0044424,GO:0044464,GO:0048037,GO:0050662,GO:0055114,GO:0070279,GO:0071704,GO:0097159,GO:1901363,GO:1901575 2.4.1.1 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001516 478.0
DYD1_k127_965877_2 Histidine kinase K07711 - 2.7.13.3 0.000000000000000000000000000000000000000000000000000000000000000000000000000000006126 287.0
DYD1_k127_965877_3 Peptidase_C39 like family - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000418 251.0
DYD1_k127_965877_4 Tetratricopeptide repeat - - - 0.00000000000000000000000000000000523 138.0
DYD1_k127_965877_5 K COG5665 CCR4-NOT transcriptional regulation complex, NOT5 subunit - - - 0.00000000006295 73.0
DYD1_k127_965877_6 EF hand - - - 0.00001236 54.0
DYD1_k127_980888_0 Acetyl-coenzyme A synthetase N-terminus - - - 3.138e-270 846.0
DYD1_k127_980888_1 Cystathionine beta-synthase K01697 - 4.2.1.22 9.873e-211 663.0
DYD1_k127_980888_2 2-keto-4-pentenoate hydratase K16171 - 3.7.1.2 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000186 495.0
DYD1_k127_980888_3 Electron transfer flavoprotein K03522 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007233 401.0
DYD1_k127_980888_4 homogentisate 1,2-dioxygenase K00451 - 1.13.11.5 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001989 350.0
DYD1_k127_980888_5 maleylacetoacetate isomerase K01800 - 5.2.1.2 0.000000000000000000000000000000000000000000000000000000000000000000000000000003911 267.0
DYD1_k127_980888_6 electron transfer flavoprotein beta subunit K03521 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000003205 249.0
DYD1_k127_980888_7 Belongs to the ompA family - - - 0.0000000000000000000000000000000000000001545 164.0
DYD1_k127_980888_8 Protein of unknown function (DUF465) K09794 - - 0.000000001291 61.0
DYD1_k127_980888_9 Domain of unknown function (DUF4398) - - - 0.0000005244 56.0
DYD1_k127_984188_0 Sterol-sensing domain of SREBP cleavage-activation K07003 - - 2.885e-299 940.0
DYD1_k127_984188_1 Na+/Pi-cotransporter K03324 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004057 417.0
DYD1_k127_984188_10 Sulfotransferase family - - - 0.0000000000000000000000000000000005018 137.0
DYD1_k127_984188_2 Glycosyl transferase family 2 - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009054 351.0
DYD1_k127_984188_3 deacetylase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006752 334.0
DYD1_k127_984188_4 Outer membrane lipoprotein-sorting protein - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002919 322.0
DYD1_k127_984188_5 Phosphatidylethanolamine-binding protein K06910 - - 0.000000000000000000000000000000000000000000000000000000000000000000000333 241.0
DYD1_k127_984188_6 Dolichyl-phosphate-mannose-protein mannosyltransferase - - - 0.000000000000000000000000000000000000000000000000000000000001146 229.0
DYD1_k127_984188_7 peptidase activity - - - 0.0000000000000000000000000000000000000000000000000000000002864 211.0
DYD1_k127_984188_8 FMN binding K00104,K16422 - 1.1.3.15,1.1.3.46 0.0000000000000000000000000000000000000000000000000685 186.0
DYD1_k127_984188_9 CoA-binding domain protein K09181 - - 0.0000000000000000000000000000000000000006804 157.0