DYD1_k127_1004769_0
Domain of unknown function (DUF4143)
K07133
-
-
0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008673
400.0
View
DYD1_k127_1004769_1
lysyl-tRNA synthetase
K04568
-
-
0.000000000000000000000000000000000000000000000000000000000000000000000000005063
265.0
View
DYD1_k127_1004769_10
Methyltransferase domain
-
-
-
0.00000000000000000000002791
107.0
View
DYD1_k127_1004769_11
Calcineurin-like phosphoesterase superfamily domain
K07095
-
-
0.00000000000000000003402
96.0
View
DYD1_k127_1004769_12
Bacteriocin-protection, YdeI or OmpD-Associated
-
-
-
0.000000000000000001054
86.0
View
DYD1_k127_1004769_13
NTP pyrophosphohydrolases including oxidative damage repair enzymes
-
-
-
0.0000000009897
66.0
View
DYD1_k127_1004769_14
Major Facilitator Superfamily
-
-
-
0.0000002264
61.0
View
DYD1_k127_1004769_15
Domain of unknown function (DUF202)
K00389
-
-
0.0000009727
54.0
View
DYD1_k127_1004769_18
copper amine
-
-
-
0.00003454
56.0
View
DYD1_k127_1004769_2
Mycolic acid cyclopropane synthetase
-
-
-
0.0000000000000000000000000000000000000000000000000014
193.0
View
DYD1_k127_1004769_3
Activator of Hsp90 ATPase
-
-
-
0.0000000000000000000000000000000000000000000000006526
177.0
View
DYD1_k127_1004769_4
Involved in peptide bond synthesis. Stimulates efficient translation and peptide-bond synthesis on native or reconstituted 70S ribosomes in vitro. Probably functions indirectly by altering the affinity of the ribosome for aminoacyl-tRNA, thus increasing their reactivity as acceptors for peptidyl transferase
K02356
-
-
0.000000000000000000000000000000000000000000008672
169.0
View
DYD1_k127_1004769_5
Belongs to the aspartate glutamate racemases family
K01779
-
5.1.1.13
0.00000000000000000000000000000000000000001365
162.0
View
DYD1_k127_1004769_6
Sodium/calcium exchanger protein
K07301
-
-
0.0000000000000000000000000000000001708
145.0
View
DYD1_k127_1004769_7
Small integral membrane protein
-
-
-
0.00000000000000000000000000000289
124.0
View
DYD1_k127_1004769_8
S1 domain
K00243
-
-
0.00000000000000000000000002886
117.0
View
DYD1_k127_1004769_9
Glutathione synthase Ribosomal protein S6 modification enzyme (Glutaminyl transferase)
K01955,K05844,K14940
-
6.3.2.32,6.3.5.5
0.00000000000000000000000008654
119.0
View
DYD1_k127_1014795_0
Belongs to the class-I aminoacyl-tRNA synthetase family
K01883
-
6.1.1.16
0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003836
428.0
View
DYD1_k127_1014795_1
ATPase that binds to both the 70S ribosome and the 50S ribosomal subunit in a nucleotide-independent manner
K06942
-
-
0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001738
353.0
View
DYD1_k127_1014795_10
Plays an important role in DNA replication, recombination and repair. Binds to ssDNA and to an array of partner proteins to recruit them to their sites of action during DNA metabolism
K03111
GO:0000725,GO:0003674,GO:0003676,GO:0003677,GO:0003697,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006139,GO:0006259,GO:0006281,GO:0006298,GO:0006310,GO:0006725,GO:0006807,GO:0006950,GO:0006974,GO:0007154,GO:0008047,GO:0008150,GO:0008152,GO:0009432,GO:0009605,GO:0009987,GO:0009991,GO:0030234,GO:0031668,GO:0033554,GO:0034641,GO:0042802,GO:0043085,GO:0043170,GO:0044093,GO:0044237,GO:0044238,GO:0044260,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0050790,GO:0050896,GO:0051716,GO:0065007,GO:0065009,GO:0071496,GO:0071704,GO:0090304,GO:0097159,GO:0098772,GO:1901360,GO:1901363
-
0.00000000000000000000000000000004779
131.0
View
DYD1_k127_1014795_11
PIN domain
K18828
-
-
0.00000000000000000000000000000949
122.0
View
DYD1_k127_1014795_12
Restriction endonuclease
K07448,K07449
-
-
0.000000000000000000000000001026
120.0
View
DYD1_k127_1014795_13
Deoxyuridine 5'-triphosphate
K01520
GO:0000287,GO:0003674,GO:0003824,GO:0004170,GO:0005488,GO:0006139,GO:0006220,GO:0006221,GO:0006226,GO:0006244,GO:0006725,GO:0006753,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0009056,GO:0009058,GO:0009117,GO:0009123,GO:0009124,GO:0009129,GO:0009130,GO:0009141,GO:0009143,GO:0009147,GO:0009149,GO:0009157,GO:0009162,GO:0009165,GO:0009166,GO:0009176,GO:0009177,GO:0009200,GO:0009204,GO:0009211,GO:0009213,GO:0009219,GO:0009221,GO:0009223,GO:0009262,GO:0009263,GO:0009264,GO:0009265,GO:0009394,GO:0009987,GO:0016043,GO:0016462,GO:0016787,GO:0016817,GO:0016818,GO:0018130,GO:0019438,GO:0019439,GO:0019637,GO:0019692,GO:0022607,GO:0034404,GO:0034641,GO:0034654,GO:0034655,GO:0043167,GO:0043169,GO:0043933,GO:0044085,GO:0044237,GO:0044238,GO:0044248,GO:0044249,GO:0044270,GO:0044271,GO:0044281,GO:0044283,GO:0046078,GO:0046080,GO:0046081,GO:0046385,GO:0046386,GO:0046434,GO:0046483,GO:0046700,GO:0046872,GO:0047429,GO:0051259,GO:0051260,GO:0055086,GO:0065003,GO:0070206,GO:0070207,GO:0071704,GO:0071840,GO:0072527,GO:0072528,GO:0072529,GO:0090407,GO:1901135,GO:1901136,GO:1901137,GO:1901292,GO:1901293,GO:1901360,GO:1901361,GO:1901362,GO:1901564,GO:1901565,GO:1901566,GO:1901575,GO:1901576
3.6.1.23
0.0000000000271
66.0
View
DYD1_k127_1014795_14
Large family of predicted nucleotide-binding domains
-
-
-
0.0000000002838
66.0
View
DYD1_k127_1014795_15
PemK-like, MazF-like toxin of type II toxin-antitoxin system
-
-
-
0.000000001453
63.0
View
DYD1_k127_1014795_17
Binds as a heterodimer with protein S6 to the central domain of the 16S rRNA, where it helps stabilize the platform of the 30S subunit
K02963
GO:0003674,GO:0003735,GO:0005198,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0006412,GO:0006518,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0015935,GO:0019538,GO:0022626,GO:0022627,GO:0032991,GO:0034641,GO:0034645,GO:0043043,GO:0043170,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:0071704,GO:1901564,GO:1901566,GO:1901576,GO:1990904
-
0.000000003351
60.0
View
DYD1_k127_1014795_18
Binds together with S18 to 16S ribosomal RNA
K02990
-
-
0.0000003711
57.0
View
DYD1_k127_1014795_2
May play a role in DNA repair. It seems to be involved in an RecBC-independent recombinational process of DNA repair. It may act with RecF and RecO
K06187
-
-
0.000000000000000000000000000000000000000000000000000000000000000002896
231.0
View
DYD1_k127_1014795_20
Required for dimerization of active 70S ribosomes into 100S ribosomes in stationary phase
K05808
GO:0003674,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0006417,GO:0006448,GO:0008150,GO:0009889,GO:0009890,GO:0009892,GO:0010468,GO:0010556,GO:0010558,GO:0010605,GO:0010608,GO:0010629,GO:0015935,GO:0017148,GO:0019222,GO:0022626,GO:0022627,GO:0031323,GO:0031324,GO:0031326,GO:0031327,GO:0032268,GO:0032269,GO:0032991,GO:0034248,GO:0034249,GO:0043021,GO:0043022,GO:0043024,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:0044877,GO:0045900,GO:0048519,GO:0048523,GO:0050789,GO:0050794,GO:0051171,GO:0051172,GO:0051246,GO:0051248,GO:0060255,GO:0065007,GO:0080090,GO:1990904,GO:2000112,GO:2000113
-
0.00005114
50.0
View
DYD1_k127_1014795_3
PFAM PDZ DHR GLGF domain protein
K03797
-
3.4.21.102
0.000000000000000000000000000000000000000000000000000000000000005701
232.0
View
DYD1_k127_1014795_4
PDZ domain (Also known as DHR or GLGF)
-
-
-
0.000000000000000000000000000000000000000000000000000003774
205.0
View
DYD1_k127_1014795_5
Phosphorylation of dTMP to form dTDP in both de novo and salvage pathways of dTTP synthesis
K00943
-
2.7.4.9
0.000000000000000000000000000000000000000000000002062
180.0
View
DYD1_k127_1014795_6
RadC-like JAB domain
K03630
-
-
0.000000000000000000000000000000000000000000008428
171.0
View
DYD1_k127_1014795_7
Involved in the import of queuosine (Q) precursors, required for Q precursor salvage
K09125
-
-
0.000000000000000000000000000000000000001053
155.0
View
DYD1_k127_1014795_8
G3E family
-
-
-
0.0000000000000000000000000000000000000233
155.0
View
DYD1_k127_1014795_9
Dihydrofolate reductase
K00287
-
1.5.1.3
0.00000000000000000000000000000000004067
141.0
View
DYD1_k127_1034417_0
Starch synthase catalytic domain
-
-
-
0.000000000000000000000000000000000000000000000000000000000000000000000000000000002819
286.0
View
DYD1_k127_1034417_1
Belongs to the glycosyl hydrolase 57 family
K07405
-
3.2.1.1
0.00000000000000000000000000000000000000000007966
164.0
View
DYD1_k127_1089970_0
Type IV secretory pathway, VirB4
-
-
-
0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009457
419.0
View
DYD1_k127_1089970_1
it binds specifically double-stranded DNA at a 9 bp consensus (dnaA box) 5'-TTATC CA A CA A-3'. DnaA binds to ATP and to acidic phospholipids
K02313
GO:0003674,GO:0003676,GO:0003677,GO:0003688,GO:0003690,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005886,GO:0006139,GO:0006259,GO:0006260,GO:0006261,GO:0006270,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0016020,GO:0034641,GO:0034645,GO:0042802,GO:0043170,GO:0043565,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044424,GO:0044464,GO:0046483,GO:0071704,GO:0071944,GO:0090304,GO:0097159,GO:1901360,GO:1901363,GO:1901576,GO:1990837
-
0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009031
326.0
View
DYD1_k127_1089970_2
Confers DNA tethering and processivity to DNA polymerases and other proteins. Acts as a clamp, forming a ring around DNA (a reaction catalyzed by the clamp-loading complex) which diffuses in an ATP-independent manner freely and bidirectionally along dsDNA. Initially characterized for its ability to contact the catalytic subunit of DNA polymerase III (Pol III), a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria
K02338
-
2.7.7.7
0.00000000000000000000000000000000000000000000053
180.0
View
DYD1_k127_1089970_3
PFAM 60 kDa inner membrane insertion protein
K03217
-
-
0.0000000000000000000000000000000003602
141.0
View
DYD1_k127_1089970_4
PFAM ribonuclease H
K03469,K06864
-
3.1.26.4
0.000000000000000000000005787
106.0
View
DYD1_k127_1089970_5
R3H domain protein
K06346
-
-
0.000000000000687
76.0
View
DYD1_k127_1089970_6
G5
-
-
-
0.00000000002099
79.0
View
DYD1_k127_1089970_7
Ribosomal protein L34
K02914
GO:0003674,GO:0003735,GO:0005198,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0006412,GO:0006518,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0015934,GO:0019538,GO:0022625,GO:0022626,GO:0032991,GO:0034641,GO:0034645,GO:0043043,GO:0043170,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:0071704,GO:1901564,GO:1901566,GO:1901576,GO:1990904
-
0.000000000405
62.0
View
DYD1_k127_1089970_8
Could be involved in insertion of integral membrane proteins into the membrane
K08998
-
-
0.00000006154
56.0
View
DYD1_k127_1227483_0
transcriptional regulatory protein
-
GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0044424,GO:0044444,GO:0044464
-
0.0000000000000000000000000000000000000000000004819
173.0
View
DYD1_k127_1227483_1
TPR repeat
-
-
-
0.0000000000007489
78.0
View
DYD1_k127_1355601_0
Catalyzes the methylthiolation of N6- (dimethylallyl)adenosine (i(6)A), leading to the formation of 2- methylthio-N6-(dimethylallyl)adenosine (ms(2)i(6)A) at position 37 in tRNAs that read codons beginning with uridine
K06168
-
2.8.4.3
0.00000000000000000000000000000000000000008299
155.0
View
DYD1_k127_1355601_1
Catalyzes the transfer of a dimethylallyl group onto the adenine at position 37 in tRNAs that read codons beginning with uridine, leading to the formation of N6-(dimethylallyl)adenosine (i(6)A)
K00791
GO:0003674,GO:0003824,GO:0006139,GO:0006396,GO:0006399,GO:0006400,GO:0006725,GO:0006807,GO:0008033,GO:0008150,GO:0008152,GO:0009451,GO:0009987,GO:0010467,GO:0016070,GO:0016740,GO:0016765,GO:0034470,GO:0034641,GO:0034660,GO:0043170,GO:0043412,GO:0044237,GO:0044238,GO:0046483,GO:0052381,GO:0071704,GO:0090304,GO:0140098,GO:0140101,GO:1901360
2.5.1.75
0.000000000000000000000000006856
122.0
View
DYD1_k127_1471334_0
Peptide chain release factor 2 directs the termination of translation in response to the peptide chain termination codons UGA and UAA
K02836
-
-
0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000004115
309.0
View
DYD1_k127_1471334_1
cell division ATP-binding protein FtsE
K09812
-
-
0.0000000000000000000000000000000000000000000000000000000001099
216.0
View
DYD1_k127_1471334_2
PPIases accelerate the folding of proteins. It catalyzes the cis-trans isomerization of proline imidic peptide bonds in oligopeptides
K03768
-
5.2.1.8
0.00000000000000000003248
90.0
View
DYD1_k127_1471334_3
Protein of unknown function (DUF4012)
-
-
-
0.0000000000000000006094
101.0
View
DYD1_k127_149200_0
The RuvA-RuvB complex in the presence of ATP renatures cruciform structure in supercoiled DNA with palindromic sequence, indicating that it may promote strand exchange reactions in homologous recombination. RuvAB is a helicase that mediates the Holliday junction migration by localized denaturation and reannealing
K03551
-
3.6.4.12
0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002181
356.0
View
DYD1_k127_149200_1
maltose O-acetyltransferase activity
K03818
-
-
0.0000000000000000000000000000000000000005868
155.0
View
DYD1_k127_149200_2
Glycosyltransferase like family 2
K07011
-
-
0.0000000000000000000000000004763
123.0
View
DYD1_k127_1510241_0
Iron-sulfur cluster-binding domain
-
-
-
0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009326
351.0
View
DYD1_k127_1510241_1
ADP-glyceromanno-heptose 6-epimerase activity
K00091
-
1.1.1.219
0.000000000000000000000000001447
118.0
View
DYD1_k127_1510241_2
Phosphoethanolamine N-methyltransferase
K05929
GO:0000003,GO:0000902,GO:0000904,GO:0001505,GO:0003006,GO:0003674,GO:0003824,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006576,GO:0006629,GO:0006644,GO:0006650,GO:0006656,GO:0006793,GO:0006796,GO:0006807,GO:0006935,GO:0007275,GO:0008150,GO:0008152,GO:0008168,GO:0008170,GO:0008610,GO:0008654,GO:0008757,GO:0009058,GO:0009308,GO:0009309,GO:0009555,GO:0009605,GO:0009653,GO:0009791,GO:0009826,GO:0009856,GO:0009860,GO:0009932,GO:0009987,GO:0010183,GO:0016043,GO:0016049,GO:0016740,GO:0016741,GO:0019637,GO:0019695,GO:0022414,GO:0022622,GO:0030154,GO:0032259,GO:0032501,GO:0032502,GO:0032989,GO:0034641,GO:0040007,GO:0040011,GO:0042133,GO:0042136,GO:0042221,GO:0042330,GO:0042401,GO:0042425,GO:0044106,GO:0044237,GO:0044238,GO:0044249,GO:0044255,GO:0044271,GO:0044424,GO:0044444,GO:0044464,GO:0044706,GO:0045017,GO:0046470,GO:0046474,GO:0046486,GO:0048229,GO:0048364,GO:0048468,GO:0048528,GO:0048588,GO:0048589,GO:0048731,GO:0048856,GO:0048868,GO:0048869,GO:0050896,GO:0050918,GO:0051704,GO:0052667,GO:0060560,GO:0065007,GO:0065008,GO:0071704,GO:0071840,GO:0090407,GO:0090696,GO:0097164,GO:0099402,GO:1901564,GO:1901566,GO:1901576
2.1.1.103
0.0000000000000000009054
97.0
View
DYD1_k127_1510241_3
phosphatidylinositol metabolic process
-
-
-
0.00000000000000006955
93.0
View
DYD1_k127_1563257_0
Acts as a processive, ATP-dependent zinc metallopeptidase for both cytoplasmic and membrane proteins. Plays a role in the quality control of integral membrane proteins
K03798
-
-
0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002324
529.0
View
DYD1_k127_1563257_1
transferase activity, transferring glycosyl groups
-
-
-
0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003503
317.0
View
DYD1_k127_1563257_10
Glycosyl hydrolases family 39
K01198
-
3.2.1.37
0.000000000000000000319
102.0
View
DYD1_k127_1563257_11
(belongs to the monovalent cation proton antiporter 2 (CPA2) transporter (TC 2.A.37) family)
K10716
-
-
0.00000000000001136
79.0
View
DYD1_k127_1563257_12
haloacid dehalogenase-like hydrolase
K06019
-
3.6.1.1
0.0000000000001893
78.0
View
DYD1_k127_1563257_13
function transcriptional attenuator common domain protein
-
-
-
0.00000000007303
76.0
View
DYD1_k127_1563257_14
PIN domain
-
-
-
0.0002306
49.0
View
DYD1_k127_1563257_15
TIGRFAM looped-hinge helix DNA binding domain, AbrB family
-
-
-
0.0004335
46.0
View
DYD1_k127_1563257_2
Tryptophanyl-tRNA synthetase
K01867
-
6.1.1.2
0.000000000000000000000000000000000000000000000000000000000000000000000000000000006883
281.0
View
DYD1_k127_1563257_3
In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity
K02335
-
2.7.7.7
0.00000000000000000000000000000000000000000000000000000000000000000000001025
253.0
View
DYD1_k127_1563257_4
tyrosine recombinase
K04763
-
-
0.000000000000000000000000000003404
131.0
View
DYD1_k127_1563257_5
Endoribonuclease L-PSP
-
-
-
0.0000000000000000000000000000435
120.0
View
DYD1_k127_1563257_6
Catalyzes the deamination of adenosine to inosine at the wobble position 34 of tRNA(Arg2)
K11991
GO:0002097,GO:0002100,GO:0006139,GO:0006382,GO:0006396,GO:0006399,GO:0006400,GO:0006725,GO:0006807,GO:0008033,GO:0008150,GO:0008152,GO:0009451,GO:0009987,GO:0010467,GO:0016070,GO:0016553,GO:0034470,GO:0034641,GO:0034660,GO:0043170,GO:0043412,GO:0044237,GO:0044238,GO:0046483,GO:0071704,GO:0090304,GO:1901360
3.5.4.33
0.0000000000000000000000000001235
121.0
View
DYD1_k127_1563257_7
Negative regulator of class I heat shock genes (grpE- dnaK-dnaJ and groELS operons). Prevents heat-shock induction of these operons
K03705
-
-
0.0000000000000000000000006005
111.0
View
DYD1_k127_1563257_8
Pyridoxamine 5'-phosphate oxidase
-
-
-
0.0000000000000000000000126
106.0
View
DYD1_k127_1563257_9
Is required not only for elongation of protein synthesis but also for the initiation of all mRNA translation through initiator tRNA(fMet) aminoacylation
K01874
GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006082,GO:0006139,GO:0006399,GO:0006412,GO:0006418,GO:0006518,GO:0006520,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0016070,GO:0019538,GO:0019752,GO:0034641,GO:0034645,GO:0034660,GO:0043038,GO:0043039,GO:0043043,GO:0043170,GO:0043436,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044281,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0071704,GO:0090304,GO:1901360,GO:1901564,GO:1901566,GO:1901576
6.1.1.10
0.00000000000000000001453
94.0
View
DYD1_k127_1676360_0
Catalyzes the attachment of threonine to tRNA(Thr) in a two-step reaction L-threonine is first activated by ATP to form Thr-AMP and then transferred to the acceptor end of tRNA(Thr)
K01868
GO:0003674,GO:0003824,GO:0004812,GO:0004829,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006082,GO:0006139,GO:0006399,GO:0006412,GO:0006418,GO:0006435,GO:0006518,GO:0006520,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0016070,GO:0016874,GO:0016875,GO:0019538,GO:0019752,GO:0034641,GO:0034645,GO:0034660,GO:0043038,GO:0043039,GO:0043043,GO:0043170,GO:0043436,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044281,GO:0044424,GO:0044464,GO:0046483,GO:0071704,GO:0090304,GO:0140098,GO:0140101,GO:1901360,GO:1901564,GO:1901566,GO:1901576
6.1.1.3
0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000227
553.0
View
DYD1_k127_1676360_1
Forms part of the ribosomal stalk which helps the ribosome interact with GTP-bound translation factors
K02867
GO:0000027,GO:0003674,GO:0003676,GO:0003723,GO:0003735,GO:0005198,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0006412,GO:0006518,GO:0006807,GO:0006996,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0015934,GO:0016043,GO:0019538,GO:0019843,GO:0022607,GO:0022613,GO:0022618,GO:0022625,GO:0022626,GO:0032991,GO:0034622,GO:0034641,GO:0034645,GO:0042254,GO:0042255,GO:0042273,GO:0043043,GO:0043170,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043603,GO:0043604,GO:0043933,GO:0044085,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:0065003,GO:0070925,GO:0071704,GO:0071826,GO:0071840,GO:0097159,GO:1901363,GO:1901564,GO:1901566,GO:1901576,GO:1990904
-
0.0000000000000000000000000000000000000000000000008578
177.0
View
DYD1_k127_1676360_2
Binds directly to 23S rRNA. The L1 stalk is quite mobile in the ribosome, and is involved in E site tRNA release
K02863
-
-
0.0000000000000000000000000000002057
132.0
View
DYD1_k127_1676360_3
nuclease activity
K18828
-
-
0.000000000000000202
83.0
View
DYD1_k127_1676360_4
GDP-mannose mannosyl hydrolase activity
K03574
-
3.6.1.55
0.000000003026
61.0
View
DYD1_k127_1689790_0
Catalyzes the formation of dTDP-glucose, from dTTP and glucose 1-phosphate, as well as its pyrophosphorolysis
K00973
-
2.7.7.24
0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000002299
294.0
View
DYD1_k127_1689790_1
Cysteine-rich secretory protein family
-
-
-
0.0000000000000000000000008086
115.0
View
DYD1_k127_1689790_2
COG0681 Signal peptidase I
K13280
-
3.4.21.89
0.0000000000000000009571
94.0
View
DYD1_k127_1691180_0
Catalyzes the ATP-dependent amination of UTP to CTP with either L-glutamine or ammonia as the source of nitrogen. Regulates intracellular CTP levels through interactions with the four ribonucleotide triphosphates
K01937
-
6.3.4.2
0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007085
478.0
View
DYD1_k127_1691180_1
This protein is located at the 30S-50S ribosomal subunit interface and may play a role in the structure and function of the aminoacyl-tRNA binding site
K02884
-
-
0.00000000000000000000000001149
112.0
View
DYD1_k127_1691180_2
PFAM phosphoribosyltransferase
K07101
-
-
0.00000000000000000000002812
108.0
View
DYD1_k127_1691180_3
Uncharacterised protein family UPF0102
K07460
-
-
0.000000001061
64.0
View
DYD1_k127_1739399_0
Catalyzes the oxidation of glucose 6-phosphate to 6- phosphogluconolactone
K00036
-
1.1.1.363,1.1.1.49
0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000044
331.0
View
DYD1_k127_1739399_1
PFAM 6-phosphogluconate dehydrogenase domain protein
K00033
-
1.1.1.343,1.1.1.44
0.000000000000000000000000000000000000000000000000000000000000000000000000000000000004184
289.0
View
DYD1_k127_1739399_2
Nitroreductase family
-
-
-
0.0000000000000000000000000000000000000000000000002803
184.0
View
DYD1_k127_1739399_3
Belongs to the class IV-like SAM-binding methyltransferase superfamily. RNA methyltransferase TrmH family
K03437
-
-
0.00000000000000000000000000000000001372
145.0
View
DYD1_k127_1739399_4
ZIP Zinc transporter
K16267
-
-
0.00000000000000000000000000000000291
139.0
View
DYD1_k127_1739399_5
Protein of unknown function (DUF4230)
-
-
-
0.000000000000000003211
87.0
View
DYD1_k127_1739399_6
Belongs to the Fur family
K03711
-
-
0.0000000000002097
75.0
View
DYD1_k127_1825104_0
Catalyzes the reversible conversion of 2- phosphoglycerate into phosphoenolpyruvate. It is essential for the degradation of carbohydrates via glycolysis
K01689
-
4.2.1.11
0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006953
349.0
View
DYD1_k127_1825104_1
Catalyzes the interconversion of 2-phosphoglycerate and 3-phosphoglycerate
K15633
-
5.4.2.12
0.0000000000000000000000000000000000000000000007175
173.0
View
DYD1_k127_1825104_2
TIGRFAM bifunctional phosphoglucose phosphomannose isomerase
K15916
-
5.3.1.8,5.3.1.9
0.00000000000000000003992
98.0
View
DYD1_k127_1825104_3
mannose-6-phosphate isomerase
K01809
-
5.3.1.8
0.00000001089
67.0
View
DYD1_k127_1825104_4
General (non sugar-specific) component of the phosphoenolpyruvate-dependent sugar phosphotransferase system (sugar PTS). This major carbohydrate active-transport system catalyzes the phosphorylation of incoming sugar substrates concomitantly with their translocation across the cell membrane. Enzyme I transfers the phosphoryl group from phosphoenolpyruvate (PEP) to the phosphoryl carrier protein (HPr)
K08483
-
2.7.3.9
0.00000006124
66.0
View
DYD1_k127_1898382_0
that it carries out the mismatch recognition step. This protein has a weak ATPase activity
K03555
-
-
0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007259
408.0
View
DYD1_k127_1898382_1
This protein is involved in the repair of mismatches in DNA. It is required for dam-dependent methyl-directed DNA mismatch repair. May act as a molecular matchmaker , a protein that promotes the formation of a stable complex between two or more DNA-binding proteins in an ATP-dependent manner without itself being part of a final effector complex
K03572
-
-
0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007904
328.0
View
DYD1_k127_2078442_0
Glycosyl transferases group 1
-
-
-
0.000000000000000000000000000000000000000000000000000000000000000000000008244
262.0
View
DYD1_k127_2078442_1
Transport permease protein
K01992,K09690
-
-
0.00000000000000000000000000000000000000000000001608
180.0
View
DYD1_k127_2078442_2
Glycosyl transferase, family 2
K00721,K07011,K13005,K20444
-
2.4.1.60,2.4.1.83
0.00000000000000000000000000000000000000266
160.0
View
DYD1_k127_2078442_3
PFAM ABC transporter
K09691
-
-
0.000000000000008132
77.0
View
DYD1_k127_2103790_0
PPIases accelerate the folding of proteins. It catalyzes the cis-trans isomerization of proline imidic peptide bonds in oligopeptides
-
-
-
0.00000000000000000000000000000000000000000000002349
177.0
View
DYD1_k127_2103790_1
Major Facilitator Superfamily
K08222
-
-
0.000000000000000000000000000000000000000000264
175.0
View
DYD1_k127_2103790_2
Belongs to the D-alanine--D-alanine ligase family
K01921
-
6.3.2.4
0.0000000000000000000000000000002241
126.0
View
DYD1_k127_2104466_0
Glycosyl transferase family 2
K07011
-
-
0.0000000000315
68.0
View
DYD1_k127_2104466_1
O-Antigen Polymerase
K18814
-
-
0.000003636
60.0
View
DYD1_k127_2307011_0
Essential cell division protein that forms a contractile ring structure (Z ring) at the future cell division site. The regulation of the ring assembly controls the timing and the location of cell division. One of the functions of the FtsZ ring is to recruit other cell division proteins to the septum to produce a new cell wall between the dividing cells. Binds GTP and shows GTPase activity
K03531
-
-
0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001623
409.0
View
DYD1_k127_2307011_1
Cell division protein that is involved in the assembly of the Z ring. May serve as a membrane anchor for the Z ring
K03590
-
-
0.0000000000000000000000000000000000000000000000000000000000000000000000000000000001646
291.0
View
DYD1_k127_2307011_2
TIGRFAM stage V sporulation protein E, cell division protein FtsW
K03588
-
-
0.00000000000000000000000000000000000000000000000000000000000000001209
237.0
View
DYD1_k127_2307011_3
Glycosyltransferase family 28 N-terminal domain
K02563
-
2.4.1.227
0.00000000000000000000000000000000000000000009941
173.0
View
DYD1_k127_2307011_4
First step of the lipid cycle reactions in the biosynthesis of the cell wall peptidoglycan
K01000
-
2.7.8.13
0.0000000000000000000000000000000000000006781
161.0
View
DYD1_k127_2310472_0
Belongs to the peptidase M48B family
K03799
-
-
0.00000000000000000000000000000000000000000000000000000000000000000000000000000006289
275.0
View
DYD1_k127_2310472_1
Allows the formation of correctly charged Gln-tRNA(Gln) through the transamidation of misacylated Glu-tRNA(Gln) in organisms which lack glutaminyl-tRNA synthetase. The reaction takes place in the presence of glutamine and ATP through an activated gamma-phospho-Glu-tRNA(Gln)
K02433
-
6.3.5.6,6.3.5.7
0.0000000000000000000001362
101.0
View
DYD1_k127_2310472_2
Allows the formation of correctly charged Asn-tRNA(Asn) or Gln-tRNA(Gln) through the transamidation of misacylated Asp- tRNA(Asn) or Glu-tRNA(Gln) in organisms which lack either or both of asparaginyl-tRNA or glutaminyl-tRNA synthetases. The reaction takes place in the presence of glutamine and ATP through an activated phospho-Asp-tRNA(Asn) or phospho-Glu-tRNA(Gln)
K02435
-
6.3.5.6,6.3.5.7
0.0000000000002182
73.0
View
DYD1_k127_2334208_0
PFAM sodium hydrogen exchanger
-
-
-
0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001467
386.0
View
DYD1_k127_2334208_1
Catalyzes the synthesis of 5,6-dihydrouridine (D), a modified base found in the D-loop of most tRNAs, via the reduction of the C5-C6 double bond in target uridines
-
-
-
0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003759
370.0
View
DYD1_k127_2334208_2
PFAM Glycosyl transferase, group 1
-
-
-
0.00000000000000000000000000000000000000000000005605
183.0
View
DYD1_k127_2334208_3
TIGRFAM comF family protein
K02242
-
-
0.0000000000000000005161
95.0
View
DYD1_k127_2334208_4
O-methyltransferase that catalyzes the 2 O-methylation steps in the ubiquinone biosynthetic pathway
K00568
-
2.1.1.222,2.1.1.64
0.000000000001688
74.0
View
DYD1_k127_2334208_5
Peptidase_C39 like family
-
-
-
0.00000001937
67.0
View
DYD1_k127_2334208_6
MOSC N-terminal beta barrel domain
K07140
-
-
0.00000002701
64.0
View
DYD1_k127_2357360_0
Catalyzes the reversible interconversion of serine and glycine with tetrahydrofolate (THF) serving as the one-carbon carrier. This reaction serves as the major source of one-carbon groups required for the biosynthesis of purines, thymidylate, methionine, and other important biomolecules. Also exhibits THF- independent aldolase activity toward beta-hydroxyamino acids, producing glycine and aldehydes, via a retro-aldol mechanism
K00600
-
2.1.2.1
0.0000000000000000000000000000000000000000000000000000000000000156
222.0
View
DYD1_k127_2413728_0
Participates in initiation and elongation during chromosome replication
K02314
-
3.6.4.12
1.891e-248
793.0
View
DYD1_k127_2413728_1
Histidyl-tRNA synthetase
K01892
-
6.1.1.21
0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000001929
306.0
View
DYD1_k127_2413728_2
Beta-lactamase superfamily domain
-
-
-
0.000000000000000000000000000000000000000000000000000004404
198.0
View
DYD1_k127_2413728_3
Belongs to the peptidase M24B family
K01262,K01271
-
3.4.11.9,3.4.13.9
0.000000000000000000000000000000000000000000000001342
187.0
View
DYD1_k127_2413728_4
Responsible for synthesis of pseudouridine from uracil
K06180
GO:0000154,GO:0000455,GO:0001522,GO:0003674,GO:0003824,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006139,GO:0006364,GO:0006396,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0009451,GO:0009982,GO:0009987,GO:0010467,GO:0016070,GO:0016072,GO:0016853,GO:0016866,GO:0022613,GO:0031118,GO:0034470,GO:0034641,GO:0034660,GO:0042254,GO:0043170,GO:0043412,GO:0044085,GO:0044237,GO:0044238,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0071704,GO:0071840,GO:0090304,GO:1901360
5.4.99.23
0.0000000000000000000000000000000000000000006477
167.0
View
DYD1_k127_2413728_5
This protein specifically catalyzes the removal of signal peptides from prolipoproteins
K03101
-
3.4.23.36
0.000002897
55.0
View
DYD1_k127_2413728_6
Transfers the N-acyl diglyceride group on what will become the N-terminal cysteine of membrane lipoproteins
K13292
GO:0006464,GO:0006807,GO:0008150,GO:0008152,GO:0009987,GO:0019538,GO:0036211,GO:0043170,GO:0043412,GO:0044237,GO:0044238,GO:0044260,GO:0044267,GO:0071704,GO:1901564
-
0.0003295
51.0
View
DYD1_k127_2475780_0
Part of the Sec protein translocase complex. Interacts with the SecYEG preprotein conducting channel. Has a central role in coupling the hydrolysis of ATP to the transfer of proteins into and across the cell membrane, serving as an ATP-driven molecular motor driving the stepwise translocation of polypeptide chains across the membrane
K03070
-
-
7.58e-235
760.0
View
DYD1_k127_2475780_1
Catalyzes the attachment of proline to tRNA(Pro) in a two-step reaction proline is first activated by ATP to form Pro- AMP and then transferred to the acceptor end of tRNA(Pro). As ProRS can inadvertently accommodate and process non-cognate amino acids such as alanine and cysteine, to avoid such errors it has two additional distinct editing activities against alanine. One activity is designated as 'pretransfer' editing and involves the tRNA(Pro)-independent hydrolysis of activated Ala-AMP. The other activity is designated 'posttransfer' editing and involves deacylation of mischarged Ala-tRNA(Pro). The misacylated Cys- tRNA(Pro) is not edited by ProRS
K01881
GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0044424,GO:0044464
6.1.1.15
0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006923
392.0
View
DYD1_k127_2475780_2
Involved in the biosynthesis of the central metabolite phospho-alpha-D-ribosyl-1-pyrophosphate (PRPP) via the transfer of pyrophosphoryl group from ATP to 1-hydroxyl of ribose-5-phosphate (Rib-5-P)
K00948
-
2.7.6.1
0.000000000000000000000000000000000000000000000000000000001496
211.0
View
DYD1_k127_2475780_3
Domain of unknown function (DUF4349)
-
-
-
0.0000000000000000000006868
107.0
View
DYD1_k127_2475780_4
Belongs to the ribF family
K11753
-
2.7.1.26,2.7.7.2
0.0000000000000004296
83.0
View
DYD1_k127_2475780_5
Catalyzes the attachment of serine to tRNA(Ser). Is also able to aminoacylate tRNA(Sec) with serine, to form the misacylated tRNA L-seryl-tRNA(Sec), which will be further converted into selenocysteinyl-tRNA(Sec)
K01875
-
6.1.1.11
0.000000001039
59.0
View
DYD1_k127_2487421_0
Sigma-70, region 4
K03088
-
-
0.00000000000003985
79.0
View
DYD1_k127_2487421_1
Ribonuclease toxin, BrnT, of type II toxin-antitoxin system
K09803
-
-
0.0000009448
51.0
View
DYD1_k127_2487421_2
CopG antitoxin of type II toxin-antitoxin system
-
-
-
0.00001749
48.0
View
DYD1_k127_2487421_3
-
-
-
-
0.0001769
49.0
View
DYD1_k127_2518553_0
Glycosyltransferase
K21001
-
-
0.0000000000000000000000000000000000001233
153.0
View
DYD1_k127_2518553_1
Dolichyl-phosphate-mannose-protein mannosyltransferase
-
-
-
0.00000000000071
80.0
View
DYD1_k127_2526383_0
Cell shape determining protein MreB Mrl
K03569
-
-
0.000000000000000000000000000000000000000000000000000003752
203.0
View
DYD1_k127_2526383_2
COG0494 NTP pyrophosphohydrolases including oxidative damage repair enzymes
K03574
-
3.6.1.55
0.00000001552
62.0
View
DYD1_k127_2526383_3
Aspartyl protease
-
-
-
0.00003201
52.0
View
DYD1_k127_2526383_4
protein conserved in bacteria
-
-
-
0.0006416
51.0
View
DYD1_k127_2558633_0
COG0396 ABC-type transport system involved in Fe-S cluster assembly ATPase component
K09013
-
-
0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000393
286.0
View
DYD1_k127_2558633_1
FeS assembly protein SufB
K09014
-
-
0.00000000000000000000002507
102.0
View
DYD1_k127_2558633_2
NUDIX domain
-
-
-
0.0000000000000004074
86.0
View
DYD1_k127_2558633_3
This enzyme scavenges exogenous and endogenous cytidine and 2'-deoxycytidine for UMP synthesis
K01489
-
3.5.4.5
0.000000000000008522
78.0
View
DYD1_k127_2614206_0
PFAM DeoC LacD family aldolase
K11645
-
4.1.2.13
0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005207
505.0
View
DYD1_k127_2614206_1
Belongs to the phosphoglycerate kinase family
K00927,K01803
-
2.7.2.3,5.3.1.1
0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001391
359.0
View
DYD1_k127_2614206_10
-
-
-
-
0.0000000533
54.0
View
DYD1_k127_2614206_11
COG NOG15344 non supervised orthologous group
-
-
-
0.0000004346
54.0
View
DYD1_k127_2614206_14
Unextendable partial coding region
-
-
-
0.00007774
45.0
View
DYD1_k127_2614206_15
Bacterial transcriptional activator domain
K12132
-
2.7.11.1
0.0001025
46.0
View
DYD1_k127_2614206_16
-
-
-
-
0.0006651
43.0
View
DYD1_k127_2614206_17
COG NOG15344 non supervised orthologous group
-
-
-
0.0009726
42.0
View
DYD1_k127_2614206_2
Fructose-1-6-bisphosphatase, N-terminal domain
K03841
-
3.1.3.11
0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007261
344.0
View
DYD1_k127_2614206_3
Sodium/hydrogen exchanger family
-
-
-
0.0000000000000000000000000000000000000000000000000000000000008054
233.0
View
DYD1_k127_2614206_4
CarboxypepD_reg-like domain
-
-
-
0.0000000000000000000000000000000000003117
147.0
View
DYD1_k127_2614206_5
phosphoglucomutase phosphomannomutase alpha beta alpha domain I
K16881
-
2.7.7.13,5.4.2.8
0.0000000000000000000000000001187
126.0
View
DYD1_k127_2614206_6
COG NOG14600 non supervised orthologous group
-
-
-
0.000000000000000000000000007515
110.0
View
DYD1_k127_2614206_7
-
-
-
-
0.00000000000000001377
83.0
View
DYD1_k127_2614206_8
-
-
-
-
0.0000000000000004481
78.0
View
DYD1_k127_2614206_9
LAGLIDADG endonuclease
-
-
-
0.000000000000001438
83.0
View
DYD1_k127_2626639_0
Produces ATP from ADP in the presence of a proton gradient across the membrane. The alpha chain is a regulatory subunit
K02111
GO:0005575,GO:0005622,GO:0005623,GO:0005886,GO:0016020,GO:0016469,GO:0032991,GO:0044424,GO:0044425,GO:0044459,GO:0044464,GO:0045259,GO:0045260,GO:0071944,GO:0098796,GO:0098797
3.6.3.14
0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001489
317.0
View
DYD1_k127_2626639_1
it plays a direct role in the translocation of protons across the membrane
K02108
-
-
0.00000000000000000000000000000000000000000000000000000000000000002978
233.0
View
DYD1_k127_2626639_2
F(1)F(0) ATP synthase produces ATP from ADP in the presence of a proton or sodium gradient. F-type ATPases consist of two structural domains, F(1) containing the extramembraneous catalytic core and F(0) containing the membrane proton channel, linked together by a central stalk and a peripheral stalk. During catalysis, ATP synthesis in the catalytic domain of F(1) is coupled via a rotary mechanism of the central stalk subunits to proton translocation
K02110
GO:0003674,GO:0003824,GO:0005215,GO:0005575,GO:0005622,GO:0005623,GO:0006139,GO:0006163,GO:0006164,GO:0006725,GO:0006753,GO:0006754,GO:0006793,GO:0006796,GO:0006807,GO:0006810,GO:0006811,GO:0006812,GO:0008150,GO:0008152,GO:0008324,GO:0009058,GO:0009117,GO:0009123,GO:0009124,GO:0009126,GO:0009127,GO:0009141,GO:0009142,GO:0009144,GO:0009145,GO:0009150,GO:0009152,GO:0009156,GO:0009161,GO:0009165,GO:0009167,GO:0009168,GO:0009199,GO:0009201,GO:0009205,GO:0009206,GO:0009259,GO:0009260,GO:0009987,GO:0015075,GO:0015077,GO:0015078,GO:0015318,GO:0015399,GO:0015405,GO:0015672,GO:0015985,GO:0015986,GO:0016020,GO:0016462,GO:0016469,GO:0016787,GO:0016817,GO:0016818,GO:0016887,GO:0017111,GO:0017144,GO:0018130,GO:0019438,GO:0019637,GO:0019693,GO:0019829,GO:0022804,GO:0022853,GO:0022857,GO:0022890,GO:0032991,GO:0033177,GO:0034220,GO:0034641,GO:0034654,GO:0042623,GO:0042625,GO:0042626,GO:0043492,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0044424,GO:0044425,GO:0044464,GO:0044769,GO:0045259,GO:0045263,GO:0046034,GO:0046390,GO:0046483,GO:0046933,GO:0051179,GO:0051234,GO:0055085,GO:0055086,GO:0071704,GO:0072521,GO:0072522,GO:0090407,GO:0090662,GO:0098655,GO:0098660,GO:0098662,GO:0098796,GO:0099131,GO:0099132,GO:1901135,GO:1901137,GO:1901293,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576,GO:1902600
-
0.00000000000000000005519
91.0
View
DYD1_k127_2626639_3
Component of the F(0) channel, it forms part of the peripheral stalk, linking F(1) to F(0)
K02109
-
-
0.0000000000007177
75.0
View
DYD1_k127_2626639_4
F(1)F(0) ATP synthase produces ATP from ADP in the presence of a proton or sodium gradient. F-type ATPases consist of two structural domains, F(1) containing the extramembraneous catalytic core and F(0) containing the membrane proton channel, linked together by a central stalk and a peripheral stalk. During catalysis, ATP synthesis in the catalytic domain of F(1) is coupled via a rotary mechanism of the central stalk subunits to proton translocation
K02109,K02113
-
-
0.0002478
46.0
View
DYD1_k127_2629417_0
Sodium/calcium exchanger protein
K07301
-
-
0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009173
307.0
View
DYD1_k127_2629417_1
Peptide chain release factor 1 directs the termination of translation in response to the peptide chain termination codons UAG and UAA
K02835
-
-
0.0000000000000000000000000000000000000000000000000000000000000000001353
243.0
View
DYD1_k127_2629417_2
50S ribosomal protein L31
K02909
-
-
0.0000000000000000000036
96.0
View
DYD1_k127_2629417_3
PDZ DHR GLGF domain protein
K04771
-
3.4.21.107
0.000000000000000001937
89.0
View
DYD1_k127_2629417_4
COG0697 Permeases of the drug metabolite transporter (DMT) superfamily
-
-
-
0.000000188
63.0
View
DYD1_k127_2629417_5
histidyl-tRNA synthetase
K01892
-
6.1.1.21
0.000003394
49.0
View
DYD1_k127_2636167_0
amino acids such as valine, to avoid such errors it has two additional distinct tRNA(Ile)-dependent editing activities. One activity is designated as 'pretransfer' editing and involves the hydrolysis of activated Val-AMP. The other activity is designated 'posttransfer' editing and involves deacylation of mischarged Val-tRNA(Ile)
K01870
-
6.1.1.5
1.201e-222
722.0
View
DYD1_k127_2636167_1
Peptidoglycan polymerase that is essential for cell wall elongation
K05837
-
-
0.00000000000000000000000000000000000000000000000002473
193.0
View
DYD1_k127_2636167_10
Lysin motif
-
-
-
0.0000000005604
68.0
View
DYD1_k127_2636167_11
Belongs to the 5'-nucleotidase family
K01081,K11751
GO:0003674,GO:0003824,GO:0005575,GO:0005622,GO:0005623,GO:0005634,GO:0005654,GO:0005737,GO:0005829,GO:0005886,GO:0006139,GO:0006163,GO:0006195,GO:0006213,GO:0006259,GO:0006725,GO:0006732,GO:0006733,GO:0006753,GO:0006793,GO:0006796,GO:0006807,GO:0007155,GO:0007159,GO:0008150,GO:0008152,GO:0008252,GO:0008253,GO:0009056,GO:0009058,GO:0009116,GO:0009117,GO:0009164,GO:0009166,GO:0009987,GO:0016020,GO:0016311,GO:0016787,GO:0016788,GO:0016791,GO:0018130,GO:0019362,GO:0019438,GO:0019439,GO:0019637,GO:0019674,GO:0022610,GO:0031974,GO:0031981,GO:0034404,GO:0034641,GO:0034654,GO:0034655,GO:0034656,GO:0042578,GO:0043170,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0043233,GO:0044237,GO:0044238,GO:0044248,GO:0044249,GO:0044260,GO:0044270,GO:0044271,GO:0044281,GO:0044282,GO:0044283,GO:0044422,GO:0044424,GO:0044428,GO:0044444,GO:0044446,GO:0044464,GO:0046135,GO:0046434,GO:0046483,GO:0046496,GO:0046700,GO:0051186,GO:0055086,GO:0070013,GO:0071704,GO:0071944,GO:0072521,GO:0072523,GO:0072524,GO:0072527,GO:0072529,GO:0090304,GO:0098609,GO:1901135,GO:1901136,GO:1901292,GO:1901360,GO:1901361,GO:1901362,GO:1901564,GO:1901565,GO:1901575,GO:1901576,GO:1901657,GO:1901658
3.1.3.5,3.6.1.45
0.00000322
57.0
View
DYD1_k127_2636167_2
Belongs to the ParB family
K03497
-
-
0.00000000000000000000000000000000000000000000000006342
187.0
View
DYD1_k127_2636167_3
Belongs to the peptidase S26 family
K03100
-
3.4.21.89
0.0000000000000000000000000000000004714
138.0
View
DYD1_k127_2636167_4
Putative RNA methylase family UPF0020
-
-
-
0.00000000000000000000000000002478
132.0
View
DYD1_k127_2636167_5
COG2244 Membrane protein involved in the export of O-antigen and teichoic acid
-
-
-
0.00000000000000000000000006523
122.0
View
DYD1_k127_2636167_6
Glycosyl transferase family 2
-
-
-
0.00000000000000000000001641
109.0
View
DYD1_k127_2636167_7
This protein binds to 23S rRNA in the presence of protein L20
K02888
-
-
0.00000000000000000001828
94.0
View
DYD1_k127_2636167_8
Belongs to the bacterial ribosomal protein bL27 family
K02899
GO:0003674,GO:0003735,GO:0005198,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0015934,GO:0022625,GO:0022626,GO:0032991,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:1990904
-
0.0000000000000000003818
89.0
View
DYD1_k127_2636167_9
COG1404 Subtilisin-like serine proteases
K13276
GO:0005575,GO:0005576
-
0.0000000000001424
80.0
View
DYD1_k127_2718383_0
Glycosyl transferase family 2
-
-
-
0.0000000000000000000000000000000001039
143.0
View
DYD1_k127_2718383_1
Glycosyltransferase, group 1 family protein
-
-
-
0.00000000000000000000000000000002204
139.0
View
DYD1_k127_2718383_2
glycosyl transferase, family 39
-
-
-
0.000000000000000000000000006192
127.0
View
DYD1_k127_2718383_3
integral membrane protein
-
-
-
0.000000000000000000003932
102.0
View
DYD1_k127_2718383_4
Dolichyl-phosphate-mannose-protein mannosyltransferase
-
-
-
0.00000000000000006034
95.0
View
DYD1_k127_2718383_5
Psort location CytoplasmicMembrane, score
K00368,K07233,K22349
-
1.16.3.3,1.7.2.1
0.00000000000007966
85.0
View
DYD1_k127_2718383_6
glycosyl transferase, family 39
-
-
-
0.000000000004988
79.0
View
DYD1_k127_2718383_7
Dolichyl-phosphate-mannose--protein O-mannosyl transferase
K00728
GO:0000030,GO:0003674,GO:0003824,GO:0006464,GO:0006486,GO:0006493,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009100,GO:0009101,GO:0009987,GO:0016740,GO:0016757,GO:0016758,GO:0019538,GO:0034645,GO:0035268,GO:0035269,GO:0036211,GO:0040007,GO:0043170,GO:0043412,GO:0043413,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0070085,GO:0071704,GO:0097502,GO:1901135,GO:1901137,GO:1901564,GO:1901566,GO:1901576
2.4.1.109
0.0009675
52.0
View
DYD1_k127_2897665_0
glycoside hydrolase
-
-
-
0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000479
544.0
View
DYD1_k127_2897665_1
BadF BadG BcrA BcrD
K00884,K02616
-
2.7.1.59
0.000000000000000000000000000000000002043
150.0
View
DYD1_k127_2897665_2
Immunoglobulin
K20020,K20244,K20245
GO:0001654,GO:0001745,GO:0001751,GO:0001754,GO:0003002,GO:0003674,GO:0005488,GO:0005515,GO:0005539,GO:0005575,GO:0007154,GO:0007165,GO:0007166,GO:0007219,GO:0007224,GO:0007275,GO:0007389,GO:0007399,GO:0007423,GO:0007444,GO:0007447,GO:0008150,GO:0008201,GO:0008284,GO:0008589,GO:0009653,GO:0009887,GO:0009888,GO:0009966,GO:0009987,GO:0010646,GO:0016020,GO:0016021,GO:0022008,GO:0023051,GO:0023052,GO:0030154,GO:0030182,GO:0031224,GO:0032501,GO:0032502,GO:0035017,GO:0035220,GO:0035222,GO:0035295,GO:0042127,GO:0042335,GO:0042802,GO:0042803,GO:0043167,GO:0043168,GO:0044425,GO:0046530,GO:0046983,GO:0048513,GO:0048518,GO:0048522,GO:0048583,GO:0048592,GO:0048699,GO:0048731,GO:0048749,GO:0048856,GO:0048869,GO:0050789,GO:0050794,GO:0050896,GO:0051716,GO:0060429,GO:0065007,GO:0090596,GO:0097367,GO:1901681
-
0.00003084
56.0
View
DYD1_k127_293572_0
COG2256 ATPase related to the helicase subunit of the Holliday junction resolvase
K07478
-
-
0.0000000000000000000000000000000000000000000000000000000000000000000000000002781
263.0
View
DYD1_k127_293572_1
PFAM HhH-GPD family protein
K03575
-
-
0.0000000000000000000000000000000000000000000000000000000000000000000000004043
255.0
View
DYD1_k127_293572_2
Reversibly transfers an adenylyl group from ATP to 4'- phosphopantetheine, yielding dephospho-CoA (dPCoA) and pyrophosphate
K02201
-
2.7.7.3
0.0000000000000000000001794
109.0
View
DYD1_k127_293572_3
Belongs to the UPF0218 family
K09735
-
-
0.0000000002144
72.0
View
DYD1_k127_2942861_0
DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates
K03046
GO:0000428,GO:0005575,GO:0005618,GO:0005622,GO:0005623,GO:0005886,GO:0008150,GO:0016020,GO:0030312,GO:0030880,GO:0032991,GO:0040007,GO:0044424,GO:0044464,GO:0061695,GO:0071944,GO:1902494,GO:1990234
2.7.7.6
0.0
1140.0
View
DYD1_k127_2942861_1
DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates
K03043
-
2.7.7.6
0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005808
439.0
View
DYD1_k127_2942861_2
Interacts with and stabilizes bases of the 16S rRNA that are involved in tRNA selection in the A site and with the mRNA backbone. Located at the interface of the 30S and 50S subunits, it traverses the body of the 30S subunit contacting proteins on the other side and probably holding the rRNA structure together. The combined cluster of proteins S8, S12 and S17 appears to hold together the shoulder and platform of the 30S subunit
K02950
-
-
0.00000000000000000000000000000000000000000000000000002049
191.0
View
DYD1_k127_2942861_3
One of the primary rRNA binding proteins, it binds directly to 16S rRNA where it nucleates assembly of the head domain of the 30S subunit. Is located at the subunit interface close to the decoding center, probably blocks exit of the E-site tRNA
K02992
-
-
0.0000000000000000000000000000000000000000002404
164.0
View
DYD1_k127_2952358_0
Catalyzes the two-step NADP-dependent conversion of GDP- 4-dehydro-6-deoxy-D-mannose to GDP-fucose, involving an epimerase and a reductase reaction
K02377
-
1.1.1.271
0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002642
422.0
View
DYD1_k127_2952358_1
Belongs to the glyceraldehyde-3-phosphate dehydrogenase family
K00134
-
1.2.1.12
0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001067
382.0
View
DYD1_k127_2952358_10
Glycosyltransferase, group 1 family protein
-
-
-
0.0000000000000000008397
99.0
View
DYD1_k127_2952358_11
Beta-eliminating lyase
K13010
-
2.6.1.102
0.0000000000003476
71.0
View
DYD1_k127_2952358_12
Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily
-
-
-
0.0000000000005421
76.0
View
DYD1_k127_2952358_13
Methyltransferase domain
-
-
-
0.000000000002387
76.0
View
DYD1_k127_2952358_14
CDP-alcohol phosphatidyltransferase
-
-
-
0.000000004795
66.0
View
DYD1_k127_2952358_15
Uncharacterized conserved protein (DUF2304)
K09153
-
-
0.0002654
48.0
View
DYD1_k127_2952358_16
polysaccharide biosynthetic process
K01992
GO:0003674,GO:0005488,GO:0005575,GO:0005576,GO:0008150,GO:0009987,GO:0044764,GO:0046812,GO:0051704
-
0.0003244
53.0
View
DYD1_k127_2952358_2
Glycosyltransferase like family 2
-
-
-
0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000695
290.0
View
DYD1_k127_2952358_3
MOFRL family
K11529
-
2.7.1.165
0.000000000000000000000000000000000000000000000000000000000000000000000000000000000519
289.0
View
DYD1_k127_2952358_4
Catalyzes the conversion of 3-deoxy-D-arabino- heptulosonate 7-phosphate (DAHP) to dehydroquinate (DHQ)
K01735
-
4.2.3.4
0.0000000000000000000000000000000000000000000000000000000000000000000000002148
261.0
View
DYD1_k127_2952358_5
Glycosyl transferase family 2
-
-
-
0.000000000000000000000000000000000000000000000000000000000002925
217.0
View
DYD1_k127_2952358_6
KR domain
K00059
GO:0000166,GO:0003674,GO:0003824,GO:0004312,GO:0004316,GO:0005488,GO:0006082,GO:0006629,GO:0006631,GO:0006633,GO:0008150,GO:0008152,GO:0008610,GO:0009058,GO:0009987,GO:0016053,GO:0016491,GO:0016614,GO:0016616,GO:0016740,GO:0016746,GO:0016747,GO:0019752,GO:0030497,GO:0032787,GO:0036094,GO:0043436,GO:0044237,GO:0044238,GO:0044249,GO:0044255,GO:0044281,GO:0044283,GO:0046394,GO:0048037,GO:0050661,GO:0050662,GO:0055114,GO:0071704,GO:0072330,GO:0097159,GO:1901265,GO:1901363,GO:1901576
1.1.1.100
0.000000000000000000000000000000000000000000006966
172.0
View
DYD1_k127_2952358_7
nucleotidyl transferase
K07281
-
2.7.7.74
0.000000000000000000000000000007281
128.0
View
DYD1_k127_2952358_8
Glycosyl transferase family 2
-
-
-
0.0000000000000000000000000001625
123.0
View
DYD1_k127_2952358_9
methyltransferase
-
-
-
0.0000000000000000000000006201
113.0
View
DYD1_k127_2998847_0
Involved in mRNA degradation. Catalyzes the phosphorolysis of single-stranded polyribonucleotides processively in the 3'- to 5'-direction
K00962
-
2.7.7.8
0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003082
623.0
View
DYD1_k127_2998847_1
One of the essential components for the initiation of protein synthesis. Protects formylmethionyl-tRNA from spontaneous hydrolysis and promotes its binding to the 30S ribosomal subunits. Also involved in the hydrolysis of GTP during the formation of the 70S ribosomal complex
K02519
-
-
0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004989
388.0
View
DYD1_k127_2998847_2
Participates in both transcription termination and antitermination
K02600
-
-
0.0000000000000000000000000000000000000000000000000000000000000000000000000000000001545
291.0
View
DYD1_k127_2998847_3
ATP binding to DnaK triggers the release of the substrate protein, thus completing the reaction cycle. Several rounds of ATP-dependent interactions between DnaJ, DnaK and GrpE are required for fully efficient folding. Also involved, together with DnaK and GrpE, in the DNA replication of plasmids through activation of initiation proteins
K03686,K05516
-
-
0.00000000000000000000000000000000000000000000000000000003737
206.0
View
DYD1_k127_2998847_4
Heat shock 70 kDa protein
K04043
-
-
0.000000000000000000000000000000000000000000005067
170.0
View
DYD1_k127_2998847_5
Forms an intersubunit bridge (bridge B4) with the 23S rRNA of the 50S subunit in the ribosome
K02956
-
-
0.000000000000000000000000009627
112.0
View
DYD1_k127_2998893_0
Can catalyze the hydrolysis of ATP in the presence of single-stranded DNA, the ATP-dependent uptake of single-stranded DNA by duplex DNA, and the ATP-dependent hybridization of homologous single-stranded DNAs. It interacts with LexA causing its activation and leading to its autocatalytic cleavage
K03553
-
-
0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001626
431.0
View
DYD1_k127_2998893_1
Endoribonuclease that initiates mRNA decay
K18682
-
-
0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003995
399.0
View
DYD1_k127_2998893_2
Belongs to the D-alanine--D-alanine ligase family
K01921
-
6.3.2.4
0.0000000000000000000000000000000000000000000000000000000000000002602
229.0
View
DYD1_k127_2998893_3
Involved in cell wall formation. Catalyzes the final step in the synthesis of UDP-N-acetylmuramoyl-pentapeptide, the precursor of murein
K01929
-
6.3.2.10
0.0000000000000000000000000000000000000000000000000000027
208.0
View
DYD1_k127_2998893_4
Alpha/beta hydrolase of unknown function (DUF1057)
-
-
-
0.00000000000000000000000000000000000000007646
160.0
View
DYD1_k127_2998893_5
Cytidine and deoxycytidylate deaminase zinc-binding region
K01489
-
3.5.4.5
0.000000000000000000000000000001019
126.0
View
DYD1_k127_2998893_6
Peptide nickel ABC transporter, substrate-binding protein
K02035
-
-
0.000000000000000000000003167
117.0
View
DYD1_k127_2998893_7
-
-
-
-
0.00000000000000000006092
104.0
View
DYD1_k127_2998893_8
Preprotein translocase SecG subunit
K03075
GO:0003674,GO:0005215,GO:0005575,GO:0005623,GO:0005886,GO:0006605,GO:0006612,GO:0006613,GO:0006614,GO:0006616,GO:0006810,GO:0006886,GO:0008104,GO:0008150,GO:0008320,GO:0008565,GO:0009987,GO:0015031,GO:0015833,GO:0016020,GO:0016043,GO:0022857,GO:0022884,GO:0031522,GO:0032978,GO:0032991,GO:0033036,GO:0033365,GO:0034613,GO:0042886,GO:0042887,GO:0043952,GO:0044464,GO:0045047,GO:0045184,GO:0046907,GO:0051179,GO:0051205,GO:0051234,GO:0051641,GO:0051649,GO:0055085,GO:0061024,GO:0065002,GO:0070727,GO:0070972,GO:0071702,GO:0071705,GO:0071806,GO:0071840,GO:0071944,GO:0072594,GO:0072599,GO:0072657,GO:0090150,GO:1904680
-
0.0001075
47.0
View
DYD1_k127_3054462_0
ATP-dependent DNA helicase RecQ
K03654
-
3.6.4.12
0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002492
464.0
View
DYD1_k127_3076603_0
Digests double-stranded RNA. Involved in the processing of primary rRNA transcript to yield the immediate precursors to the large and small rRNAs (23S and 16S). Processes some mRNAs, and tRNAs when they are encoded in the rRNA operon. Processes pre- crRNA and tracrRNA of type II CRISPR loci if present in the organism
K03685
-
3.1.26.3
0.0000000000000000000000000000000000003584
145.0
View
DYD1_k127_3076603_1
Belongs to the bacterial ribosomal protein bS16 family
K02959
-
-
0.000000000000000000000006605
106.0
View
DYD1_k127_3076603_2
Belongs to the UPF0109 family
K06960
-
-
0.00000000005845
66.0
View
DYD1_k127_3161405_0
malic enzyme
K00027,K00029
-
1.1.1.38,1.1.1.40
0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003928
415.0
View
DYD1_k127_3161405_1
Belongs to the Glu Leu Phe Val dehydrogenases family
K00260,K00262
-
1.4.1.2,1.4.1.4
0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001327
406.0
View
DYD1_k127_3161405_2
Belongs to the class-II pyridine nucleotide-disulfide oxidoreductase family
K00384,K03671
GO:0000166,GO:0001666,GO:0003674,GO:0003824,GO:0004791,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006950,GO:0008150,GO:0008152,GO:0009628,GO:0009636,GO:0009987,GO:0015035,GO:0015036,GO:0016209,GO:0016491,GO:0016651,GO:0016667,GO:0016668,GO:0019725,GO:0036094,GO:0036293,GO:0040007,GO:0042221,GO:0042592,GO:0043167,GO:0043168,GO:0044424,GO:0044444,GO:0044464,GO:0045454,GO:0048037,GO:0050660,GO:0050661,GO:0050662,GO:0050789,GO:0050794,GO:0050896,GO:0051716,GO:0055114,GO:0065007,GO:0065008,GO:0070402,GO:0070482,GO:0070887,GO:0097159,GO:0097237,GO:0098754,GO:0098869,GO:1901265,GO:1901363,GO:1990748
1.8.1.9
0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002023
353.0
View
DYD1_k127_3161405_3
Belongs to the thioredoxin family
K03671
-
-
0.000000000000000000000006545
106.0
View
DYD1_k127_3161405_4
Pfam PF02583
K21600
-
-
0.000000007006
62.0
View
DYD1_k127_3226048_0
argininosuccinate synthase
-
-
-
0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002156
509.0
View
DYD1_k127_3226048_1
Arginyl tRNA synthetase N terminal dom
K01887
GO:0003674,GO:0003824,GO:0004812,GO:0004814,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006082,GO:0006139,GO:0006399,GO:0006412,GO:0006418,GO:0006420,GO:0006518,GO:0006520,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0016070,GO:0016874,GO:0016875,GO:0019538,GO:0019752,GO:0034641,GO:0034645,GO:0034660,GO:0043038,GO:0043039,GO:0043043,GO:0043170,GO:0043436,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044281,GO:0044424,GO:0044464,GO:0046483,GO:0071704,GO:0090304,GO:0140098,GO:0140101,GO:1901360,GO:1901564,GO:1901566,GO:1901576
6.1.1.19
0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001483
323.0
View
DYD1_k127_3226048_2
Amidinotransferase
-
-
-
0.000000000006219
78.0
View
DYD1_k127_3233689_0
bacterial-type flagellum assembly
-
-
-
0.00000000000000000000000000000000000000000000000000000000000000000000000002008
263.0
View
DYD1_k127_3233689_1
it is required for DNA replication and normal SOS inducibility. RecF binds preferentially to single-stranded, linear DNA. It also seems to bind ATP
K03629
-
-
0.000000000000000000000000000000000000000000005881
177.0
View
DYD1_k127_3233689_2
Fic/DOC family
K07341
-
-
0.00000000000000000000000000000000000000004453
155.0
View
DYD1_k127_3233689_3
Bifunctional enzyme that catalyzes the epimerization of the S- and R-forms of NAD(P)HX and the dehydration of the S-form of NAD(P)HX at the expense of ADP, which is converted to AMP. This allows the repair of both epimers of NAD(P)HX, a damaged form of NAD(P)H that is a result of enzymatic or heat-dependent hydration
K17758,K17759
-
4.2.1.136,5.1.99.6
0.0000000000000000000000000000000000001548
151.0
View
DYD1_k127_3233689_4
-
-
-
-
0.0000000005453
64.0
View
DYD1_k127_3233689_5
aspartate kinase activity
-
-
-
0.000002079
57.0
View
DYD1_k127_3233875_0
Ribonucleotide reductase, barrel domain
K21636
-
1.1.98.6
2.198e-262
826.0
View
DYD1_k127_3233875_1
Prevents misfolding and promotes the refolding and proper assembly of unfolded polypeptides generated under stress conditions
K04077
-
-
0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000113
537.0
View
DYD1_k127_3233875_10
Binds to Cpn60 in the presence of Mg-ATP and suppresses the ATPase activity of the latter
K04078
GO:0003674,GO:0005488,GO:0005515,GO:0005575,GO:0005576,GO:0005618,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005886,GO:0006355,GO:0006457,GO:0006458,GO:0006950,GO:0006986,GO:0008150,GO:0009266,GO:0009408,GO:0009628,GO:0009889,GO:0009987,GO:0010033,GO:0010468,GO:0010556,GO:0016020,GO:0019219,GO:0019222,GO:0019899,GO:0030312,GO:0031323,GO:0031326,GO:0033554,GO:0034605,GO:0035375,GO:0035966,GO:0040007,GO:0042221,GO:0043167,GO:0043169,GO:0044424,GO:0044444,GO:0044464,GO:0046677,GO:0046872,GO:0050789,GO:0050794,GO:0050896,GO:0051082,GO:0051084,GO:0051085,GO:0051087,GO:0051171,GO:0051252,GO:0051716,GO:0060255,GO:0061077,GO:0065007,GO:0071944,GO:0080090,GO:1903506,GO:2000112,GO:2001141
-
0.000000000000000000004939
96.0
View
DYD1_k127_3233875_11
Belongs to the cytidylate kinase family. Type 2 subfamily
K00945
-
2.7.4.25
0.000000000713
68.0
View
DYD1_k127_3233875_12
PFAM Uncharacterised P-loop hydrolase UPF0079
K06925
GO:0008150,GO:0040007
-
0.000000000936
70.0
View
DYD1_k127_3233875_13
EGF domain
-
-
-
0.00000009703
66.0
View
DYD1_k127_3233875_14
prohibitin homologues
K17080
-
-
0.000001459
57.0
View
DYD1_k127_3233875_15
Membrane protein insertase, YidC Oxa1 family
K03217
-
-
0.000007089
57.0
View
DYD1_k127_3233875_16
protein serine/threonine phosphatase activity
-
-
-
0.00001733
57.0
View
DYD1_k127_3233875_17
membrane
-
-
-
0.0003129
47.0
View
DYD1_k127_3233875_2
Peptidoglycan polymerase that catalyzes glycan chain elongation from lipid-linked precursors
K05365
-
2.4.1.129,3.4.16.4
0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004657
506.0
View
DYD1_k127_3233875_3
PFAM glycosyl transferase, family 51
-
-
-
0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001208
475.0
View
DYD1_k127_3233875_4
Required for the formation of a threonylcarbamoyl group on adenosine at position 37 (t(6)A37) in tRNAs that read codons beginning with adenine. Is involved in the transfer of the threonylcarbamoyl moiety of threonylcarbamoyl-AMP (TC-AMP) to the N6 group of A37, together with TsaE and TsaB. TsaD likely plays a direct catalytic role in this reaction
K01409
GO:0000408,GO:0002949,GO:0005575,GO:0005622,GO:0005623,GO:0006139,GO:0006396,GO:0006399,GO:0006400,GO:0006725,GO:0006807,GO:0008033,GO:0008150,GO:0008152,GO:0009451,GO:0009987,GO:0010467,GO:0016070,GO:0032991,GO:0034470,GO:0034641,GO:0034660,GO:0043170,GO:0043412,GO:0044237,GO:0044238,GO:0044424,GO:0044464,GO:0046483,GO:0070525,GO:0071704,GO:0090304,GO:1901360
2.3.1.234
0.00000000000000000000000000000000000000000000000000000000000000000000003411
254.0
View
DYD1_k127_3233875_5
Belongs to the cytidylate kinase family. Type 1 subfamily
K00945
-
2.7.4.25
0.00000000000000000000000000000000000000000000000000001224
196.0
View
DYD1_k127_3233875_6
Negatively regulates transcription of bacterial ribonucleotide reductase nrd genes and operons by binding to NrdR- boxes
K07738
-
-
0.000000000000000000000000000000000000000002422
161.0
View
DYD1_k127_3233875_7
TIGRFAM Sua5 YciO YrdC YwlC family protein
K07566
-
2.7.7.87
0.0000000000000000000000000000001857
137.0
View
DYD1_k127_3233875_8
Required for rescue of stalled ribosomes mediated by trans-translation. Binds to transfer-messenger RNA (tmRNA), required for stable association of tmRNA with ribosomes. tmRNA and SmpB together mimic tRNA shape, replacing the anticodon stem-loop with SmpB. tmRNA is encoded by the ssrA gene
K03664
-
-
0.000000000000000000000000000003195
126.0
View
DYD1_k127_3233875_9
family 18
-
-
-
0.000000000000000000000000000003382
136.0
View
DYD1_k127_3234401_0
Sodium hydrogen exchanger
K03455
-
-
0.0000000000000000000000000000000000000000000001122
183.0
View
DYD1_k127_3234401_1
NUDIX domain
-
-
-
0.0000000000000000000000000000000000002358
145.0
View
DYD1_k127_3234401_2
PFAM NUDIX hydrolase domain
-
-
-
0.00000000000000000000000000000000129
136.0
View
DYD1_k127_3234401_3
Belongs to the inositol monophosphatase superfamily
K01092
-
3.1.3.25
0.0000000000000000000000000000009513
131.0
View
DYD1_k127_3234401_4
calcium- and calmodulin-responsive adenylate cyclase activity
-
-
-
0.00000000000000000000000002492
124.0
View
DYD1_k127_3234401_5
NUDIX domain
K01515
-
3.6.1.13
0.000000000000006191
81.0
View
DYD1_k127_3234401_6
HicA toxin of bacterial toxin-antitoxin,
-
-
-
0.00000000004101
66.0
View
DYD1_k127_3234401_7
PFAM Uncharacterised protein family UPF0150
-
-
-
0.00000007591
57.0
View
DYD1_k127_3298870_0
Facilitates transcription termination by a mechanism that involves Rho binding to the nascent RNA, activation of Rho's RNA-dependent ATPase activity, and release of the mRNA from the DNA template
K03628
-
-
0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001988
406.0
View
DYD1_k127_3298870_1
An essential GTPase which binds GTP, GDP and possibly (p)ppGpp with moderate affinity, with high nucleotide exchange rates and a fairly low GTP hydrolysis rate. Plays a role in control of the cell cycle, stress response, ribosome biogenesis and in those bacteria that undergo differentiation, in morphogenesis control
K03979
-
-
0.0000000000000000000000000000000000000000000000000000000000000000000000000000000008188
286.0
View
DYD1_k127_3298870_2
Peptidoglycan-binding LysM
-
-
-
0.000000000000000000000000000000000000000000000000000000462
207.0
View
DYD1_k127_3298870_3
general secretion pathway protein G
K02456
-
-
0.00000001183
63.0
View
DYD1_k127_3298870_4
Tetratricopeptide repeat
-
-
-
0.00000001837
68.0
View
DYD1_k127_3298870_5
Prokaryotic N-terminal methylation motif
K02456
-
-
0.000001015
59.0
View
DYD1_k127_3298870_6
Prokaryotic N-terminal methylation motif
K02456
-
-
0.000004039
55.0
View
DYD1_k127_3298870_7
prepilin-type N-terminal cleavage methylation
K02456
-
-
0.0003126
51.0
View
DYD1_k127_3298870_8
Hep Hag repeat protein
-
-
-
0.0009588
52.0
View
DYD1_k127_332238_0
alkyl hydroperoxide reductase Thiol specific antioxidant Mal allergen
K03564
-
1.11.1.15
0.0000000000000000000000000000000000000000000000005635
182.0
View
DYD1_k127_332238_1
Poorly processive, error-prone DNA polymerase involved in untargeted mutagenesis. Copies undamaged DNA at stalled replication forks, which arise in vivo from mismatched or misaligned primer ends. These misaligned primers can be extended by PolIV. Exhibits no 3'-5' exonuclease (proofreading) activity. May be involved in translesional synthesis, in conjunction with the beta clamp from PolIII
K02346
-
2.7.7.7
0.000000000000000000000000000000000000000000000004201
188.0
View
DYD1_k127_332238_2
Domain of unknown function (DUF427)
-
-
-
0.00000000000000000000000000000000000004874
146.0
View
DYD1_k127_332238_3
Arginyl tRNA synthetase N terminal dom
K01887
-
6.1.1.19
0.000000000000000000000007615
108.0
View
DYD1_k127_332238_4
Helix-turn-helix domain
-
-
-
0.0000000000002669
75.0
View
DYD1_k127_332238_5
-
-
-
-
0.0000003712
55.0
View
DYD1_k127_3369790_0
Catalyzes the interconversion of 2-phosphoglycerate and 3-phosphoglycerate
K15633
GO:0003674,GO:0003824,GO:0004619,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005975,GO:0006082,GO:0006090,GO:0006091,GO:0006096,GO:0006139,GO:0006163,GO:0006164,GO:0006165,GO:0006725,GO:0006732,GO:0006733,GO:0006753,GO:0006754,GO:0006757,GO:0006793,GO:0006796,GO:0006807,GO:0006950,GO:0006979,GO:0008150,GO:0008152,GO:0009056,GO:0009058,GO:0009108,GO:0009117,GO:0009123,GO:0009124,GO:0009126,GO:0009127,GO:0009132,GO:0009135,GO:0009141,GO:0009142,GO:0009144,GO:0009145,GO:0009150,GO:0009152,GO:0009156,GO:0009161,GO:0009165,GO:0009166,GO:0009167,GO:0009168,GO:0009179,GO:0009185,GO:0009199,GO:0009201,GO:0009205,GO:0009206,GO:0009259,GO:0009260,GO:0009987,GO:0016052,GO:0016053,GO:0016310,GO:0016853,GO:0016866,GO:0016868,GO:0017144,GO:0018130,GO:0019359,GO:0019362,GO:0019363,GO:0019438,GO:0019439,GO:0019637,GO:0019693,GO:0019752,GO:0030145,GO:0032787,GO:0034404,GO:0034641,GO:0034654,GO:0034655,GO:0042866,GO:0043167,GO:0043169,GO:0043436,GO:0043937,GO:0044237,GO:0044238,GO:0044248,GO:0044249,GO:0044270,GO:0044271,GO:0044281,GO:0044283,GO:0044424,GO:0044444,GO:0044464,GO:0046031,GO:0046034,GO:0046390,GO:0046394,GO:0046434,GO:0046483,GO:0046496,GO:0046537,GO:0046700,GO:0046872,GO:0046914,GO:0046939,GO:0050789,GO:0050793,GO:0050896,GO:0051186,GO:0051188,GO:0055086,GO:0065007,GO:0071704,GO:0072330,GO:0072521,GO:0072522,GO:0072524,GO:0072525,GO:0090407,GO:1901135,GO:1901137,GO:1901292,GO:1901293,GO:1901360,GO:1901361,GO:1901362,GO:1901564,GO:1901566,GO:1901575,GO:1901576
5.4.2.12
0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007267
416.0
View
DYD1_k127_3369790_1
Ultra-violet resistance protein B
K03702
-
-
0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005103
324.0
View
DYD1_k127_3369790_2
coenzyme F420-1:gamma-L-glutamate ligase activity
K12234,K22099
-
6.3.2.12,6.3.2.17,6.3.2.31,6.3.2.34
0.00000000000000000000000000000000000000000000000000004802
196.0
View
DYD1_k127_3369790_3
Represses a number of genes involved in the response to DNA damage (SOS response), including recA and lexA. In the presence of single-stranded DNA, RecA interacts with LexA causing an autocatalytic cleavage which disrupts the DNA-binding part of LexA, leading to derepression of the SOS regulon and eventually DNA repair
K01356
-
3.4.21.88
0.0000000000000000000000000000000000000000000001086
175.0
View
DYD1_k127_3369790_4
Domain of unknown function (DUF368)
K08974
-
-
0.000000000000000000000000000000000000004147
158.0
View
DYD1_k127_3369790_5
PFAM Cobalamin adenosyltransferase
K00798
-
2.5.1.17
0.000000000000000000000000000000005515
134.0
View
DYD1_k127_3379376_0
Part of a stress-induced multi-chaperone system, it is involved in the recovery of the cell from heat-induced damage, in cooperation with DnaK, DnaJ and GrpE
K03694,K03695
GO:0000166,GO:0003674,GO:0003824,GO:0005488,GO:0005515,GO:0005524,GO:0005575,GO:0005618,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005886,GO:0006508,GO:0006807,GO:0006950,GO:0006986,GO:0008144,GO:0008150,GO:0008152,GO:0008233,GO:0009266,GO:0009408,GO:0009628,GO:0010033,GO:0016020,GO:0016462,GO:0016787,GO:0016817,GO:0016818,GO:0016887,GO:0017076,GO:0017111,GO:0019538,GO:0030312,GO:0030554,GO:0031249,GO:0032553,GO:0032555,GO:0032559,GO:0035639,GO:0035966,GO:0036094,GO:0040007,GO:0042221,GO:0042623,GO:0042802,GO:0043167,GO:0043168,GO:0043170,GO:0044238,GO:0044424,GO:0044444,GO:0044464,GO:0050896,GO:0071704,GO:0071944,GO:0097159,GO:0097367,GO:0140096,GO:1901265,GO:1901363,GO:1901564
-
1.688e-312
978.0
View
DYD1_k127_3379376_1
ATP-dependent serine protease that mediates the selective degradation of mutant and abnormal proteins as well as certain short-lived regulatory proteins. Required for cellular homeostasis and for survival from DNA damage and developmental changes induced by stress. Degrades polypeptides processively to yield small peptide fragments that are 5 to 10 amino acids long. Binds to DNA in a double-stranded, site-specific manner
K01338
-
3.4.21.53
7.034e-217
700.0
View
DYD1_k127_3379376_12
-
-
-
-
0.000000000001025
70.0
View
DYD1_k127_3379376_13
-
-
-
-
0.0000001544
53.0
View
DYD1_k127_3379376_14
Catalyzes the 2-thiolation of uridine at the wobble position (U34) of tRNA, leading to the formation of s(2)U34
K00566
-
2.8.1.13
0.000000989
55.0
View
DYD1_k127_3379376_15
-
-
-
-
0.000006764
51.0
View
DYD1_k127_3379376_16
COG3103 SH3 domain protein
K01448
GO:0005575,GO:0005623,GO:0030288,GO:0030313,GO:0031975,GO:0042597,GO:0044464
3.5.1.28
0.0004463
51.0
View
DYD1_k127_3379376_2
ATP-dependent DNA helicase
K03657
-
3.6.4.12
0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008838
534.0
View
DYD1_k127_3379376_3
Methicillin resistance protein
-
-
-
0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002014
364.0
View
DYD1_k127_3379376_4
Catalyzes the reversible phosphorylation of UMP to UDP
K09903
-
2.7.4.22
0.00000000000000000000000000000000000000000000000000000000000000000000000000000001343
275.0
View
DYD1_k127_3379376_5
triose-phosphate isomerase activity
K01803
GO:0003674,GO:0003824,GO:0004807,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005975,GO:0005996,GO:0006006,GO:0006066,GO:0006071,GO:0006081,GO:0006082,GO:0006090,GO:0006091,GO:0006094,GO:0006096,GO:0006139,GO:0006163,GO:0006164,GO:0006165,GO:0006725,GO:0006732,GO:0006733,GO:0006753,GO:0006754,GO:0006757,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0009056,GO:0009058,GO:0009108,GO:0009117,GO:0009123,GO:0009124,GO:0009126,GO:0009127,GO:0009132,GO:0009135,GO:0009141,GO:0009142,GO:0009144,GO:0009145,GO:0009150,GO:0009152,GO:0009156,GO:0009161,GO:0009165,GO:0009166,GO:0009167,GO:0009168,GO:0009179,GO:0009185,GO:0009199,GO:0009201,GO:0009205,GO:0009206,GO:0009259,GO:0009260,GO:0009987,GO:0016051,GO:0016052,GO:0016053,GO:0016310,GO:0016853,GO:0016860,GO:0016861,GO:0017144,GO:0018130,GO:0019318,GO:0019319,GO:0019359,GO:0019362,GO:0019363,GO:0019400,GO:0019405,GO:0019438,GO:0019439,GO:0019563,GO:0019637,GO:0019682,GO:0019693,GO:0019751,GO:0019752,GO:0032787,GO:0034404,GO:0034641,GO:0034654,GO:0034655,GO:0042866,GO:0043436,GO:0044237,GO:0044238,GO:0044248,GO:0044249,GO:0044262,GO:0044270,GO:0044271,GO:0044275,GO:0044281,GO:0044282,GO:0044283,GO:0044424,GO:0044444,GO:0044464,GO:0046031,GO:0046034,GO:0046164,GO:0046166,GO:0046174,GO:0046184,GO:0046364,GO:0046390,GO:0046394,GO:0046434,GO:0046483,GO:0046496,GO:0046700,GO:0046939,GO:0051186,GO:0051188,GO:0055086,GO:0071704,GO:0072330,GO:0072521,GO:0072522,GO:0072524,GO:0072525,GO:0090407,GO:1901135,GO:1901137,GO:1901292,GO:1901293,GO:1901360,GO:1901361,GO:1901362,GO:1901564,GO:1901566,GO:1901575,GO:1901576,GO:1901615,GO:1901616
5.3.1.1
0.00000000000000000000000000000000000000000003742
169.0
View
DYD1_k127_3379376_6
Belongs to the glyceraldehyde-3-phosphate dehydrogenase family
K00134
GO:0000166,GO:0003674,GO:0003824,GO:0004365,GO:0005488,GO:0008150,GO:0008152,GO:0016491,GO:0016620,GO:0016903,GO:0036094,GO:0043891,GO:0048037,GO:0050662,GO:0051287,GO:0055114,GO:0097159,GO:1901265,GO:1901363
1.2.1.12
0.0000000000000000000000000000000000002891
147.0
View
DYD1_k127_3379376_7
membrane
-
-
-
0.000000000000000000000000000000000277
150.0
View
DYD1_k127_3379376_8
HEPN domain
-
-
-
0.000000000000000000008757
97.0
View
DYD1_k127_3379376_9
-
-
-
-
0.0000000000000000413
82.0
View
DYD1_k127_3397516_0
Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family
-
-
-
0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001768
378.0
View
DYD1_k127_3397516_1
Belongs to the UPF0176 family
K07146
-
-
0.00000000000000000000000000000000000000000000000000000000000000000000002081
251.0
View
DYD1_k127_3397516_10
Part of the MsrPQ system that repairs oxidized periplasmic proteins containing methionine sulfoxide residues (Met-O), using respiratory chain electrons. Thus protects these proteins from oxidative-stress damage caused by reactive species of oxygen and chlorine generated by the host defense mechanisms. MsrPQ is essential for the maintenance of envelope integrity under bleach stress, rescuing a wide series of structurally unrelated periplasmic proteins from methionine oxidation. MsrQ provides electrons for reduction to the reductase catalytic subunit MsrP, using the quinone pool of the respiratory chain
K17247
-
-
0.0001151
52.0
View
DYD1_k127_3397516_2
Fn3 associated
-
-
-
0.000000000000000000000000000000000000000000000000000000000000002878
235.0
View
DYD1_k127_3397516_3
Staphylococcal nuclease homologues
K01174
-
3.1.31.1
0.0000000000000000000000000000000009495
138.0
View
DYD1_k127_3397516_4
VTC domain
-
-
-
0.000000000000000000000000000000001426
138.0
View
DYD1_k127_3397516_5
Domain of unknown function (DUF4956)
-
-
-
0.0000000000000000000000000004573
122.0
View
DYD1_k127_3397516_6
Transglycosylase associated protein
-
-
-
0.0000000000000000000000427
100.0
View
DYD1_k127_3397516_7
YGGT family
-
-
-
0.00000008257
58.0
View
DYD1_k127_3397516_8
Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family
-
-
-
0.000001513
61.0
View
DYD1_k127_3397516_9
Dolichyl-phosphate-mannose-protein mannosyltransferase
-
-
-
0.000005499
57.0
View
DYD1_k127_342811_0
PolyA polymerase
K00974
-
2.7.7.72
0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000006316
303.0
View
DYD1_k127_342811_1
Part of the Sec protein translocase complex. Interacts with the SecYEG preprotein conducting channel. SecDF uses the proton motive force (PMF) to complete protein translocation after the ATP-dependent function of SecA
K03072,K12257
-
-
0.000000000000000000000000000000000000000000000000000000000000000000000000000000000002201
296.0
View
DYD1_k127_342811_2
Single-stranded-DNA-specific exonuclease RecJ
K07462
-
-
0.00000000000000000000000000000000000000000000000000000000000000001175
238.0
View
DYD1_k127_342811_3
Part of the Sec protein translocase complex. Interacts with the SecYEG preprotein conducting channel. SecDF uses the proton motive force (PMF) to complete protein translocation after the ATP-dependent function of SecA
K03074
-
-
0.000000000000000000000000000000000000000000000000004136
192.0
View
DYD1_k127_342811_4
zinc metalloprotease
K11749
-
-
0.0000000000000000000000000000000000000000000003933
181.0
View
DYD1_k127_342811_5
Responsible for the release of ribosomes from messenger RNA at the termination of protein biosynthesis. May increase the efficiency of translation by recycling ribosomes from one round of translation to another
K02838
-
-
0.000000000000000000000000000000000000002187
154.0
View
DYD1_k127_342811_6
Protein of unknown function (DUF3048) C-terminal domain
-
-
-
0.00000000000000000000000000000000000009944
156.0
View
DYD1_k127_342811_7
nucleotidyltransferase activity
K07075
-
-
0.0000000000000000000003147
104.0
View
DYD1_k127_343261_0
DALR anticodon binding domain
K01887
-
6.1.1.19
0.00000000000000000000000000000000000000000000000000000000004125
224.0
View
DYD1_k127_343261_1
Domain of unknown function (DUF378)
K09779
-
-
0.000000009758
59.0
View
DYD1_k127_343261_2
cytochrome c biogenesis protein
-
-
-
0.0000004548
53.0
View
DYD1_k127_3466504_0
ATPase (AAA
-
-
-
0.000000000000000000000000000000000000000000000000000000000000004983
230.0
View
DYD1_k127_3466504_1
NUDIX domain
K01515
-
3.6.1.13
0.00000000000000000000000000000000000000000000000000000000002195
210.0
View
DYD1_k127_3466504_10
Serine hydrolase
K07002
-
-
0.00000000000000000004907
97.0
View
DYD1_k127_3466504_11
PFAM helix-turn-helix domain protein
-
-
-
0.00000000003117
66.0
View
DYD1_k127_3466504_12
Belongs to the Nudix hydrolase family
K03574
-
3.6.1.55
0.000000001481
62.0
View
DYD1_k127_3466504_13
HD superfamily hydrolase
K06950
-
-
0.000006619
55.0
View
DYD1_k127_3466504_14
C-5 cytosine-specific DNA methylase
K00558
-
2.1.1.37
0.000009598
50.0
View
DYD1_k127_3466504_15
Helix-turn-helix domain
-
-
-
0.00002329
54.0
View
DYD1_k127_3466504_2
Recombinase
K06400
-
-
0.0000000000000000000000000000000000000000000000000000000623
214.0
View
DYD1_k127_3466504_3
regulation of cell proliferation
K07002
GO:0005575,GO:0005622,GO:0005623,GO:0005634,GO:0005654,GO:0008150,GO:0031974,GO:0031981,GO:0042127,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0043233,GO:0044422,GO:0044424,GO:0044428,GO:0044446,GO:0044464,GO:0050789,GO:0050794,GO:0065007,GO:0070013
-
0.00000000000000000000000000000000000000000000000000001154
194.0
View
DYD1_k127_3466504_4
GDP-mannose mannosyl hydrolase activity
K03574
-
3.6.1.55
0.00000000000000000000000000000000000000000000000000002941
190.0
View
DYD1_k127_3466504_5
Peptidase family S58
-
-
-
0.0000000000000000000000000000000000000000000000000004364
197.0
View
DYD1_k127_3466504_6
NUDIX domain
K03574
-
3.6.1.55
0.0000000000000000000000000000000001716
138.0
View
DYD1_k127_3466504_7
Endoribonuclease L-PSP
-
-
-
0.000000000000000000000000001711
115.0
View
DYD1_k127_3466504_8
Subtilase family
-
-
-
0.000000000000000000000000004133
129.0
View
DYD1_k127_3466504_9
Ceramidase
-
-
-
0.000000000000000000000006548
109.0
View
DYD1_k127_3488684_0
Transketolase, pyrimidine binding domain
K00615
-
2.2.1.1
1.525e-195
628.0
View
DYD1_k127_3488684_1
Belongs to the LDH MDH superfamily. LDH family
K00016
-
1.1.1.27
0.000000000000000000000000000000000000000000000000000000000000000000000003549
254.0
View
DYD1_k127_3488684_2
Succinyl-CoA synthetase functions in the citric acid cycle (TCA), coupling the hydrolysis of succinyl-CoA to the synthesis of either ATP or GTP and thus represents the only step of substrate-level phosphorylation in the TCA. The alpha subunit of the enzyme binds the substrates coenzyme A and phosphate, while succinate binding and nucleotide specificity is provided by the beta subunit
K01902
-
6.2.1.5
0.000000000000000000000000000000000000000000000000000000000000000000001814
245.0
View
DYD1_k127_3488684_3
Involved in base excision repair of DNA damaged by oxidation or by mutagenic agents. Acts as DNA glycosylase that recognizes and removes damaged bases. Has a preference for oxidized purines, such as 7,8-dihydro-8-oxoguanine (8-oxoG). Has AP (apurinic apyrimidinic) lyase activity and introduces nicks in the DNA strand. Cleaves the DNA backbone by beta-delta elimination to generate a single-strand break at the site of the removed base with both 3'- and 5'-phosphates
K10563
GO:0006139,GO:0006259,GO:0006281,GO:0006725,GO:0006807,GO:0006950,GO:0006974,GO:0008150,GO:0008152,GO:0009987,GO:0033554,GO:0034641,GO:0043170,GO:0044237,GO:0044238,GO:0044260,GO:0046483,GO:0050896,GO:0051716,GO:0071704,GO:0090304,GO:1901360
3.2.2.23,4.2.99.18
0.000000000000000000000000000000000000000000001564
175.0
View
DYD1_k127_3488684_4
Citrate synthase, C-terminal domain
K15234
-
4.1.3.34
0.000000000000000000000000000000000000000000462
166.0
View
DYD1_k127_3488684_5
Belongs to the succinate malate CoA ligase beta subunit family
K15231
-
2.3.3.8
0.0000000000000000000000000000000000005948
153.0
View
DYD1_k127_3488684_6
Thioredoxin
-
-
-
0.000000000000000000000003094
108.0
View
DYD1_k127_349184_0
A type II topoisomerase that negatively supercoils closed circular double-stranded (ds) DNA in an ATP-dependent manner to modulate DNA topology and maintain chromosomes in an underwound state. Negative supercoiling favors strand separation, and DNA replication, transcription, recombination and repair, all of which involve strand separation. Also able to catalyze the interconversion of other topological isomers of dsDNA rings, including catenanes and knotted rings. Type II topoisomerases break and join 2 DNA strands simultaneously in an ATP-dependent manner
K02469
-
5.99.1.3
1.379e-247
792.0
View
DYD1_k127_349184_1
Belongs to the 'phage' integrase family. XerC subfamily
K03733
-
-
0.000000000000000000000000000000000000000000000000000003309
202.0
View
DYD1_k127_3528717_0
Parallel beta-helix repeats
-
-
-
0.00012
54.0
View
DYD1_k127_3530827_0
Catalyzes the conversion of 1-hydroxy-2-methyl-2-(E)- butenyl 4-diphosphate (HMBPP) into a mixture of isopentenyl diphosphate (IPP) and dimethylallyl diphosphate (DMAPP). Acts in the terminal step of the DOXP MEP pathway for isoprenoid precursor biosynthesis
K02945,K03527
-
1.17.7.4
0.00000000000000000000000000000000000000000000000000000000001983
220.0
View
DYD1_k127_3530827_1
DNA-dependent ATPase involved in processing of recombination intermediates, plays a role in repairing DNA breaks. Stimulates the branch migration of RecA-mediated strand transfer reactions, allowing the 3' invading strand to extend heteroduplex DNA faster. Binds ssDNA in the presence of ADP but not other nucleotides, has ATPase activity that is stimulated by ssDNA and various branched DNA structures, but inhibited by SSB. Does not have RecA's homology-searching function
K04485
GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0044424,GO:0044444,GO:0044464
-
0.00000000000000000000000000001053
126.0
View
DYD1_k127_3858731_0
Protein of unknown function (DUF1624)
-
-
-
0.000000000000000000000000000000000004857
146.0
View
DYD1_k127_3858731_1
transporter
-
-
-
0.0000000000000000000000001936
117.0
View
DYD1_k127_3858731_2
peptidase activity
-
-
-
0.00000000000000000121
91.0
View
DYD1_k127_3858731_3
Penicillinase repressor
-
GO:0003674,GO:0003676,GO:0003677,GO:0005488,GO:0006355,GO:0008150,GO:0009889,GO:0010468,GO:0010556,GO:0019219,GO:0019222,GO:0031323,GO:0031326,GO:0042221,GO:0046677,GO:0050789,GO:0050794,GO:0050896,GO:0051171,GO:0051252,GO:0060255,GO:0065007,GO:0080090,GO:0097159,GO:1901363,GO:1903506,GO:2000112,GO:2001141
-
0.0000000000003154
74.0
View
DYD1_k127_3858731_5
BlaR1 peptidase M56
-
-
-
0.0000006496
60.0
View
DYD1_k127_3858731_6
-
-
-
-
0.0005356
50.0
View
DYD1_k127_3955196_0
Aspartyl-tRNA synthetase with relaxed tRNA specificity since it is able to aspartylate not only its cognate tRNA(Asp) but also tRNA(Asn). Reaction proceeds in two steps L-aspartate is first activated by ATP to form Asp-AMP and then transferred to the acceptor end of tRNA(Asp Asn)
K01876
GO:0005575,GO:0005618,GO:0005623,GO:0030312,GO:0044464,GO:0071944
6.1.1.12
0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009012
381.0
View
DYD1_k127_3955196_1
Belongs to the peptidase S11 family
K07258
-
3.4.16.4
0.00000000000000000002284
98.0
View
DYD1_k127_3975876_0
(ABC) transporter
K01990
-
-
0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002744
371.0
View
DYD1_k127_3975876_1
This protein is one of the early assembly proteins of the 50S ribosomal subunit, although it is not seen to bind rRNA by itself. It is important during the early stages of 50S assembly
K02871
-
-
0.000000000000000000000000000000000000000000000009791
174.0
View
DYD1_k127_3975876_2
ABC-2 family transporter protein
K01992
-
-
0.00000000000000000000001937
109.0
View
DYD1_k127_3975876_3
Belongs to the universal ribosomal protein uS9 family
K02996
-
-
0.000000000000000000006193
99.0
View
DYD1_k127_3975876_4
transport system, permease component
K01992
-
-
0.00000000000000002851
92.0
View
DYD1_k127_3975876_5
transport system, permease component
K01992
-
-
0.0000000000001942
80.0
View
DYD1_k127_3975876_6
transport system permease component
K01992
-
-
0.00000000005717
73.0
View
DYD1_k127_3975876_7
PFAM VanZ family protein
-
-
-
0.0000000001109
67.0
View
DYD1_k127_3975876_8
Histone-like DNA-binding protein which is capable of wrapping DNA to stabilize it, and thus to prevent its denaturation under extreme environmental conditions
K03530
-
-
0.0000000002365
64.0
View
DYD1_k127_3975876_9
cell adhesion
-
-
-
0.0000000006958
72.0
View
DYD1_k127_4022780_0
Catalyzes the dephosphorylation of undecaprenyl diphosphate (UPP). Confers resistance to bacitracin
K06153
-
3.6.1.27
0.00000000000000000000000000000000000000000000000008052
187.0
View
DYD1_k127_4022780_1
AI-2E family transporter
K03548
GO:0003674,GO:0005215,GO:0005575,GO:0005623,GO:0005886,GO:0005887,GO:0006810,GO:0008150,GO:0016020,GO:0016021,GO:0031224,GO:0031226,GO:0044425,GO:0044459,GO:0044464,GO:0051179,GO:0051234,GO:0055085,GO:0071944
-
0.00000000000000000000000000000001503
139.0
View
DYD1_k127_4022780_2
Psort location Cytoplasmic, score
K07391
-
-
0.00000000000324
71.0
View
DYD1_k127_4022780_3
Conserved TM helix
-
-
-
0.0000000001926
70.0
View
DYD1_k127_4080978_0
DNA polymerase III alpha subunit
K02337
-
2.7.7.7
9.256e-210
672.0
View
DYD1_k127_4080978_1
Allows the formation of correctly charged Asn-tRNA(Asn) or Gln-tRNA(Gln) through the transamidation of misacylated Asp- tRNA(Asn) or Glu-tRNA(Gln) in organisms which lack either or both of asparaginyl-tRNA or glutaminyl-tRNA synthetases. The reaction takes place in the presence of glutamine and ATP through an activated phospho-Asp-tRNA(Asn) or phospho-Glu-tRNA(Gln)
K02434
-
6.3.5.6,6.3.5.7
0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000538
361.0
View
DYD1_k127_4080978_2
Allows the formation of correctly charged Gln-tRNA(Gln) through the transamidation of misacylated Glu-tRNA(Gln) in organisms which lack glutaminyl-tRNA synthetase. The reaction takes place in the presence of glutamine and ATP through an activated gamma-phospho-Glu-tRNA(Gln)
K02433
-
6.3.5.6,6.3.5.7
0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002219
342.0
View
DYD1_k127_4101465_0
Fic/DOC family
-
-
-
0.0000000000000000000000000000000000000000000000002522
189.0
View
DYD1_k127_4101465_1
GDP-mannose mannosyl hydrolase activity
K03574
-
3.6.1.55
0.000000000000000000000000000000000000000000000002021
177.0
View
DYD1_k127_4101465_2
Protein of unknown function (DUF1398)
-
-
-
0.000000000000000000000000000000000000000000003291
167.0
View
DYD1_k127_4101465_3
RNA 2'-O ribose methyltransferase substrate binding
K03437
-
-
0.000000000000000004754
88.0
View
DYD1_k127_411229_0
ligase activity
-
-
-
0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005129
495.0
View
DYD1_k127_411229_1
Catalyzes the condensation of isopentenyl diphosphate (IPP) with allylic pyrophosphates generating different type of terpenoids
K00806
-
2.5.1.31
0.00000000000000000000000000000000000000000000000000000000000000167
226.0
View
DYD1_k127_411229_2
Prokaryotic glutathione synthetase, ATP-grasp domain
K05844,K14940
-
6.3.2.32
0.0000000000000000000000000000000000000001279
162.0
View
DYD1_k127_411229_3
Catalyzes the formation of isopentenyl diphosphate (IPP), the building block of all isoprenoids
K06981
-
2.7.4.26
0.0000000000000000000000000000001486
134.0
View
DYD1_k127_411229_4
Catalyzes the 1,3-allylic rearrangement of the homoallylic substrate isopentenyl (IPP) to its highly electrophilic allylic isomer, dimethylallyl diphosphate (DMAPP)
K01823
-
5.3.3.2
0.00000000000000000000000004621
115.0
View
DYD1_k127_411229_5
CopG antitoxin of type II toxin-antitoxin system
-
-
-
0.000000000000000000000001453
106.0
View
DYD1_k127_411229_6
Catalyzes the phosphorylation of (R)-mevalonate (MVA) to (R)-mevalonate 5-phosphate (MVAP). Functions in the mevalonate (MVA) pathway leading to isopentenyl diphosphate (IPP), a key precursor for the biosynthesis of isoprenoid compounds such as archaeal membrane lipids
K00869
GO:0003674,GO:0003824,GO:0004496,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006084,GO:0006139,GO:0006163,GO:0006629,GO:0006637,GO:0006644,GO:0006720,GO:0006725,GO:0006732,GO:0006753,GO:0006790,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0008202,GO:0008299,GO:0008610,GO:0008654,GO:0009058,GO:0009117,GO:0009150,GO:0009240,GO:0009259,GO:0009987,GO:0016125,GO:0016301,GO:0016310,GO:0016740,GO:0016772,GO:0016773,GO:0019287,GO:0019637,GO:0019693,GO:0033865,GO:0033875,GO:0034032,GO:0034641,GO:0035383,GO:0043603,GO:0044237,GO:0044238,GO:0044249,GO:0044255,GO:0044281,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0046490,GO:0051186,GO:0055086,GO:0071704,GO:0072521,GO:0090407,GO:1901135,GO:1901360,GO:1901564,GO:1901576,GO:1901615
2.7.1.36
0.0000000007034
70.0
View
DYD1_k127_4137596_0
P22 coat protein - gene protein 5
-
-
-
0.000000000000000000000000000000000000000000000000000000000000000000000000000000000001252
294.0
View
DYD1_k127_4137596_1
Terminase-like family
-
-
-
0.0000000000000000000000000000000000000000000000000000000000000000000000000000000002527
288.0
View
DYD1_k127_4137596_2
SNF2 family N-terminal domain
-
-
-
0.000000000000000000000000000000000000000000000000001022
203.0
View
DYD1_k127_4137596_3
Pentapeptide repeats (9 copies)
-
-
-
0.000000000000000000000000000000000000000000298
169.0
View
DYD1_k127_4137596_4
Phage portal protein, SPP1 Gp6-like
-
-
-
0.00000000000000000000000000002636
133.0
View
DYD1_k127_4137596_5
Phage plasmid primase, P4 family
K06919
-
-
0.0000000000000000000000001507
123.0
View
DYD1_k127_4137596_7
cellulose binding
-
-
-
0.00000000002006
74.0
View
DYD1_k127_4137596_9
Peptidase_C39 like family
-
-
-
0.00002655
53.0
View
DYD1_k127_4144968_0
His Kinase A (phosphoacceptor) domain
-
-
-
0.000000000000000000000000000000000000000000000001615
192.0
View
DYD1_k127_4144968_1
response regulator, receiver
-
-
-
0.0000000000000008676
81.0
View
DYD1_k127_4171331_0
Polysaccharide biosynthesis protein
K01710
-
4.2.1.46
0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001485
350.0
View
DYD1_k127_4171331_1
ATPases associated with a variety of cellular activities
K09691
-
-
0.0000000000000000000000000000000000000000000000000000000000000009777
224.0
View
DYD1_k127_4171331_2
Glycosyl transferases group 1
-
-
-
0.000000000000000000000000000000000000000000000000000381
199.0
View
DYD1_k127_4171331_3
Glycosyl transferases group 1
K12994
-
2.4.1.349
0.0000000000000000000000000000000000000000000002975
181.0
View
DYD1_k127_4171331_4
The RuvA-RuvB complex in the presence of ATP renatures cruciform structure in supercoiled DNA with palindromic sequence, indicating that it may promote strand exchange reactions in homologous recombination. RuvAB is a helicase that mediates the Holliday junction migration by localized denaturation and reannealing. RuvA stimulates, in the presence of DNA, the weak ATPase activity of RuvB
K03550
-
3.6.4.12
0.00000000000000000000000004793
114.0
View
DYD1_k127_4171331_5
Nuclease that resolves Holliday junction intermediates in genetic recombination. Cleaves the cruciform structure in supercoiled DNA by nicking to strands with the same polarity at sites symmetrically opposed at the junction in the homologous arms and leaves a 5'-terminal phosphate and a 3'-terminal hydroxyl group
K01159
GO:0000725,GO:0003674,GO:0003824,GO:0004518,GO:0004519,GO:0004520,GO:0004536,GO:0005575,GO:0005622,GO:0005623,GO:0006139,GO:0006259,GO:0006260,GO:0006261,GO:0006281,GO:0006310,GO:0006725,GO:0006807,GO:0006950,GO:0006974,GO:0008150,GO:0008152,GO:0008821,GO:0009058,GO:0009059,GO:0009987,GO:0016787,GO:0016788,GO:0016889,GO:0016894,GO:0031297,GO:0032991,GO:0033554,GO:0034641,GO:0034645,GO:0043170,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044424,GO:0044464,GO:0045005,GO:0046483,GO:0048476,GO:0050896,GO:0051716,GO:0071704,GO:0071932,GO:0090304,GO:0090305,GO:0140097,GO:1901360,GO:1901576
3.1.22.4
0.000000000000000000000000271
111.0
View
DYD1_k127_4171331_6
Dolichyl-phosphate-mannose-protein mannosyltransferase
-
-
-
0.000000000006045
78.0
View
DYD1_k127_4182768_0
PFAM CoA-binding domain protein
K01905,K22224
-
6.2.1.13
0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001075
401.0
View
DYD1_k127_4182768_1
response regulator
-
-
-
0.0000000000000000000000000000000000000000000000000000000000000005003
226.0
View
DYD1_k127_4182768_2
Has an important function as a repair enzyme for proteins that have been inactivated by oxidation. Catalyzes the reversible oxidation-reduction of methionine sulfoxide in proteins to methionine
K07304
-
1.8.4.11
0.000000000000000000000000000000000000000000000000000000003299
205.0
View
DYD1_k127_4182768_3
SelR domain
K07305
-
1.8.4.12
0.00000000000000000000000000000000000000000000000000003358
190.0
View
DYD1_k127_4182768_4
PFAM Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase
-
-
-
0.000000000000000000000000000000000000004176
159.0
View
DYD1_k127_4182768_5
Methyltransferase FkbM domain
-
-
-
0.0000000000000001243
89.0
View
DYD1_k127_4387035_0
Cell wall formation. Adds enolpyruvyl to UDP-N- acetylglucosamine
K00790
-
2.5.1.7
0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008734
323.0
View
DYD1_k127_4387035_1
pilus assembly protein
K02662
-
-
0.000000000000000000000002253
115.0
View
DYD1_k127_4387035_2
Methyltransferase domain
-
-
-
0.00000002952
64.0
View
DYD1_k127_4387035_3
Catalyzes the cleavage of the N-glycosidic bond of deoxyribonucleoside 5'-monophosphates to yield deoxyribose 5- phosphate and a purine or pyrimidine base
-
GO:0003674,GO:0003824,GO:0006139,GO:0006725,GO:0006753,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0009056,GO:0009058,GO:0009123,GO:0009125,GO:0009159,GO:0009162,GO:0009987,GO:0016787,GO:0016798,GO:0016799,GO:0018130,GO:0019438,GO:0019439,GO:0019637,GO:0034404,GO:0034641,GO:0034654,GO:0034655,GO:0044237,GO:0044238,GO:0044248,GO:0044249,GO:0044270,GO:0044271,GO:0044281,GO:0044283,GO:0046434,GO:0046483,GO:0046700,GO:0055086,GO:0070694,GO:0071704,GO:1901292,GO:1901360,GO:1901361,GO:1901362,GO:1901575,GO:1901576
-
0.0000002148
59.0
View
DYD1_k127_4387035_4
2'-deoxynucleoside 5'-phosphate N-hydrolase 1
-
GO:0001558,GO:0003674,GO:0003824,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005634,GO:0006139,GO:0006725,GO:0006753,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0009056,GO:0009058,GO:0009123,GO:0009125,GO:0009159,GO:0009162,GO:0009987,GO:0016787,GO:0016798,GO:0016799,GO:0018130,GO:0019438,GO:0019439,GO:0019637,GO:0030307,GO:0034404,GO:0034641,GO:0034654,GO:0034655,GO:0040008,GO:0042802,GO:0042803,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0044237,GO:0044238,GO:0044248,GO:0044249,GO:0044270,GO:0044271,GO:0044281,GO:0044283,GO:0044424,GO:0044464,GO:0045927,GO:0046434,GO:0046483,GO:0046700,GO:0046983,GO:0048518,GO:0048522,GO:0050789,GO:0050794,GO:0051128,GO:0055086,GO:0065007,GO:0070694,GO:0071704,GO:1901292,GO:1901360,GO:1901361,GO:1901362,GO:1901575,GO:1901576
-
0.000003766
56.0
View
DYD1_k127_4387035_5
Catalyzes the cleavage of the N-glycosidic bond of deoxyribonucleoside 5'-monophosphates to yield deoxyribose 5- phosphate and a purine or pyrimidine base
-
-
-
0.0001739
50.0
View
DYD1_k127_4449338_0
Catalyzes the attachment of glycine to tRNA(Gly)
K01880
GO:0003674,GO:0003824,GO:0004812,GO:0004820,GO:0005488,GO:0005515,GO:0016874,GO:0016875,GO:0046983,GO:0140098,GO:0140101
6.1.1.14
0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002932
472.0
View
DYD1_k127_4449338_1
Cell wall formation. Adds enolpyruvyl to UDP-N- acetylglucosamine
K00790
-
2.5.1.7
0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009595
347.0
View
DYD1_k127_4449338_10
Cell wall formation
K00075
-
1.3.1.98
0.00000000000000000000000000000000000000000000000001107
192.0
View
DYD1_k127_4449338_11
TIGRFAM exopolysaccharide biosynthesis polyprenyl glycosylphosphotransferase
K00996
-
2.7.8.6
0.0000000000000000000000000000000000000000000000003498
182.0
View
DYD1_k127_4449338_12
ADP-glyceromanno-heptose 6-epimerase activity
-
-
-
0.0000000000000000000000000009746
130.0
View
DYD1_k127_4449338_13
glycosyl transferase group 1
-
-
-
0.00000000000000000000001635
113.0
View
DYD1_k127_4449338_14
Belongs to the MraZ family
K03925
GO:0000976,GO:0001067,GO:0003674,GO:0003676,GO:0003677,GO:0003690,GO:0003700,GO:0005488,GO:0006355,GO:0008150,GO:0009889,GO:0009890,GO:0009892,GO:0010468,GO:0010556,GO:0010558,GO:0010605,GO:0010629,GO:0019219,GO:0019222,GO:0031323,GO:0031324,GO:0031326,GO:0031327,GO:0031333,GO:0043254,GO:0043565,GO:0044087,GO:0044212,GO:0045892,GO:0045934,GO:0048519,GO:0048523,GO:0050789,GO:0050794,GO:0051128,GO:0051129,GO:0051171,GO:0051172,GO:0051252,GO:0051253,GO:0060255,GO:0065007,GO:0080090,GO:0097159,GO:0140110,GO:1901363,GO:1902679,GO:1903506,GO:1903507,GO:1990837,GO:2000112,GO:2000113,GO:2000142,GO:2000143,GO:2001141
-
0.0000000000000000000001364
102.0
View
DYD1_k127_4449338_15
PFAM glycosyl transferase group 1
-
-
-
0.0000000000000000000006199
99.0
View
DYD1_k127_4449338_16
Involved in DNA repair and RecF pathway recombination
K03584
-
-
0.000000000000008979
81.0
View
DYD1_k127_4449338_2
PFAM Nucleotidyl transferase
K00971
-
2.7.7.13
0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000005826
300.0
View
DYD1_k127_4449338_3
Catalyzes the addition of an amino acid to the nucleotide precursor UDP-N-acetylmuramoyl-L-alanyl-D-glutamate (UMAG) in the biosynthesis of bacterial cell-wall peptidoglycan
K01928
-
6.3.2.13
0.0000000000000000000000000000000000000000000000000000000000000000000000000000000444
282.0
View
DYD1_k127_4449338_4
Belongs to the MurCDEF family
K01924
-
6.3.2.8
0.00000000000000000000000000000000000000000000000000000000000000000000000002685
268.0
View
DYD1_k127_4449338_5
PFAM Glycosyl transferase, group 1
-
-
-
0.0000000000000000000000000000000000000000000000000000000000000000000001655
253.0
View
DYD1_k127_4449338_6
Penicillin-binding protein, dimerisation domain
K03587
-
3.4.16.4
0.00000000000000000000000000000000000000000000000000000000000000000004052
253.0
View
DYD1_k127_4449338_7
PFAM Glycosyl transferase family 2
K07011,K20444
-
-
0.0000000000000000000000000000000000000000000000000000000000000884
223.0
View
DYD1_k127_4449338_8
Uncharacterised protein family UPF0052
-
-
-
0.0000000000000000000000000000000000000000000000000000000000007804
222.0
View
DYD1_k127_4449338_9
Specifically methylates the N4 position of cytidine in position 1402 (C1402) of 16S rRNA
K03438
GO:0000154,GO:0001510,GO:0003674,GO:0003824,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006139,GO:0006364,GO:0006396,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0008168,GO:0008170,GO:0008173,GO:0008649,GO:0008757,GO:0009451,GO:0009987,GO:0010467,GO:0016070,GO:0016072,GO:0016434,GO:0016740,GO:0016741,GO:0022613,GO:0031167,GO:0032259,GO:0034470,GO:0034641,GO:0034660,GO:0042254,GO:0043170,GO:0043412,GO:0043414,GO:0044085,GO:0044237,GO:0044238,GO:0044260,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0070475,GO:0071424,GO:0071704,GO:0071840,GO:0090304,GO:0140098,GO:0140102,GO:1901360
2.1.1.199
0.0000000000000000000000000000000000000000000000000004504
195.0
View
DYD1_k127_462814_0
Belongs to the pyruvate kinase family
K00873
GO:0001871,GO:0003674,GO:0003824,GO:0004743,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005975,GO:0006082,GO:0006090,GO:0006091,GO:0006096,GO:0006116,GO:0006139,GO:0006163,GO:0006164,GO:0006165,GO:0006725,GO:0006732,GO:0006733,GO:0006734,GO:0006753,GO:0006754,GO:0006757,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0009056,GO:0009058,GO:0009108,GO:0009117,GO:0009123,GO:0009124,GO:0009126,GO:0009127,GO:0009132,GO:0009135,GO:0009141,GO:0009142,GO:0009144,GO:0009145,GO:0009150,GO:0009152,GO:0009156,GO:0009161,GO:0009165,GO:0009166,GO:0009167,GO:0009168,GO:0009179,GO:0009185,GO:0009199,GO:0009201,GO:0009205,GO:0009206,GO:0009259,GO:0009260,GO:0009986,GO:0009987,GO:0016052,GO:0016053,GO:0016310,GO:0016740,GO:0016772,GO:0016773,GO:0017144,GO:0018130,GO:0019359,GO:0019362,GO:0019363,GO:0019438,GO:0019439,GO:0019637,GO:0019674,GO:0019693,GO:0019752,GO:0030246,GO:0030247,GO:0032787,GO:0034404,GO:0034641,GO:0034654,GO:0034655,GO:0042866,GO:0043436,GO:0044237,GO:0044238,GO:0044248,GO:0044249,GO:0044270,GO:0044271,GO:0044281,GO:0044283,GO:0044424,GO:0044444,GO:0044464,GO:0046031,GO:0046034,GO:0046390,GO:0046394,GO:0046434,GO:0046483,GO:0046496,GO:0046700,GO:0046939,GO:0051186,GO:0051188,GO:0055086,GO:0055114,GO:0071704,GO:0072330,GO:0072521,GO:0072522,GO:0072524,GO:0072525,GO:0090407,GO:1901135,GO:1901137,GO:1901292,GO:1901293,GO:1901360,GO:1901361,GO:1901362,GO:1901564,GO:1901566,GO:1901575,GO:1901576,GO:2001065
2.7.1.40
0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001331
342.0
View
DYD1_k127_462814_1
Arginyl tRNA synthetase N terminal dom
K01887
-
6.1.1.19
0.00000000000000000000000000000002261
132.0
View
DYD1_k127_462814_2
YbaK proline--tRNA ligase associated domain protein
K19055
GO:0002161,GO:0002196,GO:0003674,GO:0003824,GO:0006139,GO:0006399,GO:0006417,GO:0006450,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0009889,GO:0009891,GO:0009893,GO:0009987,GO:0010468,GO:0010556,GO:0010557,GO:0010604,GO:0010608,GO:0010628,GO:0016070,GO:0016787,GO:0016788,GO:0019222,GO:0031323,GO:0031325,GO:0031326,GO:0031328,GO:0032268,GO:0032270,GO:0034248,GO:0034250,GO:0034641,GO:0034660,GO:0043170,GO:0044237,GO:0044238,GO:0045727,GO:0045903,GO:0046483,GO:0048518,GO:0048522,GO:0050789,GO:0050794,GO:0051171,GO:0051173,GO:0051246,GO:0051247,GO:0052689,GO:0060255,GO:0065007,GO:0065008,GO:0071704,GO:0080090,GO:0090304,GO:0106074,GO:0140098,GO:0140101,GO:1901360,GO:2000112
-
0.000000000000000000003284
100.0
View
DYD1_k127_4676291_0
The UvrABC repair system catalyzes the recognition and processing of DNA lesions. UvrA is an ATPase and a DNA-binding protein. A damage recognition complex composed of 2 UvrA and 2 UvrB subunits scans DNA for abnormalities. When the presence of a lesion has been verified by UvrB, the UvrA molecules dissociate
K03701
-
-
0.0
1061.0
View
DYD1_k127_4676291_1
Catalyzes the 2-thiolation of uridine at the wobble position (U34) of tRNA, leading to the formation of s(2)U34
K00566
-
2.8.1.13
0.00000000000000000000000000000000000000000000000000000000000000000000000000002574
268.0
View
DYD1_k127_4676291_10
cysteine protease
-
-
-
0.00006146
56.0
View
DYD1_k127_4676291_2
Sugar-transfer associated ATP-grasp
-
-
-
0.00000000000000000000000000000000000000000000000000000001022
214.0
View
DYD1_k127_4676291_3
The UvrABC repair system catalyzes the recognition and processing of DNA lesions. UvrC both incises the 5' and 3' sides of the lesion. The N-terminal half is responsible for the 3' incision and the C-terminal half is responsible for the 5' incision
K03703
-
-
0.00000000000000000000000000000000000000000000000000001697
205.0
View
DYD1_k127_4676291_4
DUF1704
-
-
-
0.00000000000000000000000000000000000004345
155.0
View
DYD1_k127_4676291_5
damaged site, the DNA wraps around one UvrB monomer. DNA wrap is dependent on ATP binding by UvrB and probably causes local melting of the DNA helix, facilitating insertion of UvrB beta-hairpin between the DNA strands. Then UvrB probes one DNA strand for the presence of a lesion. If a lesion is found the UvrA subunits dissociate and the UvrB-DNA preincision complex is formed. This complex is subsequently bound by UvrC and the second UvrB is released. If no lesion is found, the DNA wraps around the other UvrB subunit that will check the other stand for damage
K03702
-
-
0.0000000000000000000000009978
108.0
View
DYD1_k127_4676291_6
Responsible for synthesis of pseudouridine from uracil- 55 in the psi GC loop of transfer RNAs
K03177,K03483
GO:0001522,GO:0003674,GO:0003824,GO:0006139,GO:0006396,GO:0006399,GO:0006400,GO:0006725,GO:0006807,GO:0008033,GO:0008150,GO:0008152,GO:0009451,GO:0009982,GO:0009987,GO:0010467,GO:0016070,GO:0016071,GO:0016556,GO:0016853,GO:0016866,GO:0034470,GO:0034641,GO:0034660,GO:0043170,GO:0043412,GO:0044237,GO:0044238,GO:0046483,GO:0071704,GO:0090304,GO:1901360,GO:1990481
5.4.99.25
0.0000000000000000001718
97.0
View
DYD1_k127_4676291_7
Inactive transglutaminase fused to 7 transmembrane helices
-
-
-
0.00000000000468
77.0
View
DYD1_k127_4676291_8
Mycobacterial 4 TMS phage holin, superfamily IV
K08972
-
-
0.0000000005064
64.0
View
DYD1_k127_4676291_9
TIGRFAM HAD-superfamily hydrolase, subfamily IA, variant 3
K07025
-
-
0.000007489
54.0
View
DYD1_k127_467802_0
The natural substrate for this enzyme may be peptidyl- tRNAs which drop off the ribosome during protein synthesis
K01056
GO:0003674,GO:0003824,GO:0004045,GO:0016787,GO:0016788,GO:0052689,GO:0140098,GO:0140101
3.1.1.29
0.000000000000004677
78.0
View
DYD1_k127_467802_1
Plays a role in peptidoglycan recycling by cleaving the terminal beta-1,4-linked N-acetylglucosamine (GlcNAc) from peptide-linked peptidoglycan fragments, giving rise to free GlcNAc, anhydro-N-acetylmuramic acid and anhydro-N-acetylmuramic acid-linked peptides
K01207
GO:0000270,GO:0003674,GO:0003824,GO:0004553,GO:0004563,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006022,GO:0006807,GO:0008150,GO:0008152,GO:0009254,GO:0009273,GO:0009987,GO:0015929,GO:0016787,GO:0016798,GO:0030203,GO:0042546,GO:0043170,GO:0044085,GO:0044424,GO:0044444,GO:0044464,GO:0071554,GO:0071704,GO:0071840,GO:1901135,GO:1901564
3.2.1.52
0.00005192
53.0
View
DYD1_k127_4705369_0
SPFH domain-Band 7 family
-
-
-
0.00000000000000000000000000000000000000000000000000000000000000000000000000137
261.0
View
DYD1_k127_4705369_1
PFAM VanW family protein
-
-
-
0.00000000000000000000000000000000000000000000000000001441
211.0
View
DYD1_k127_4705369_2
ABC transporter substrate-binding protein
K02027
-
-
0.000000000000000000000001134
120.0
View
DYD1_k127_4705369_3
Psort location Cytoplasmic, score
K14623
-
-
0.000000000000000000001682
96.0
View
DYD1_k127_4705369_4
-
-
-
-
0.00000000000000001095
87.0
View
DYD1_k127_4705369_5
Catalyzes the ADP transfer from ATP to D-glycero-beta-D- manno-heptose 1-phosphate, yielding ADP-D-glycero-beta-D-manno- heptose
-
-
-
0.000000000000004058
89.0
View
DYD1_k127_4705369_6
nucleotidyltransferase activity
-
-
-
0.00000000000003842
85.0
View
DYD1_k127_4707893_0
DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates
K03043
-
2.7.7.6
1.747e-240
767.0
View
DYD1_k127_4707893_1
Threonyl and Alanyl tRNA synthetase second additional domain
-
-
-
0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002548
549.0
View
DYD1_k127_4707893_2
LemA family
K03744
-
-
0.00000000000000000000000000000000000000000000000494
176.0
View
DYD1_k127_4707893_3
Functions as a peptidoglycan terminase that cleaves nascent peptidoglycan strands endolytically to terminate their elongation
K07082
-
-
0.000000000000000000000000000000000000000009989
167.0
View
DYD1_k127_4707893_4
Glutamyl-tRNA amidotransferase
K09117
-
-
0.00000000000000000000005964
104.0
View
DYD1_k127_4707893_5
Could be a nuclease involved in processing of the 5'-end of pre-16S rRNA
K07447
-
-
0.00000000000306
72.0
View
DYD1_k127_4707893_6
PFAM GCN5-related N-acetyltransferase
-
-
-
0.0000000002053
68.0
View
DYD1_k127_4707893_7
PEGA domain
K15539
-
-
0.0000001443
61.0
View
DYD1_k127_4707893_8
peptidase C60 sortase A and B
-
-
-
0.0000003691
61.0
View
DYD1_k127_4758403_0
AraC-like ligand binding domain
-
-
-
0.0000000000000000000000000000000000000000000000000021
184.0
View
DYD1_k127_4758403_1
The alpha subunit is responsible for the aldol cleavage of indoleglycerol phosphate to indole and glyceraldehyde 3- phosphate
K01695
-
4.2.1.20
0.0000000000000000000000000000000000000000002013
165.0
View
DYD1_k127_4758403_2
Protein of unknown function (DUF1653)
-
-
-
0.000000000000000001453
87.0
View
DYD1_k127_4758403_3
-
-
-
-
0.00000000000002141
79.0
View
DYD1_k127_479480_0
RNA polymerase that catalyzes the synthesis of short RNA molecules used as primers for DNA polymerase during DNA replication
K02316
-
-
0.00000000000000000000000000000000000000000000000000000000000000000000003745
250.0
View
DYD1_k127_479480_1
Involved in the cellular defense against the biological effects of O6-methylguanine (O6-MeG) and O4-methylthymine (O4-MeT) in DNA. Repairs the methylated nucleobase in DNA by stoichiometrically transferring the methyl group to a cysteine residue in the enzyme. This is a suicide reaction the enzyme is irreversibly inactivated
K00567,K10778
-
2.1.1.63
0.0000000000000000000000000007509
119.0
View
DYD1_k127_479480_2
Nucleotide pyrophosphohydrolase
-
-
-
0.000000477
56.0
View
DYD1_k127_479480_3
Toxic component of a toxin-antitoxin (TA) module
K07171
-
-
0.0006253
47.0
View
DYD1_k127_500450_0
Catalyzes the first step in hexosamine metabolism, converting fructose-6P into glucosamine-6P using glutamine as a nitrogen source
K00820
-
2.6.1.16
0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003015
600.0
View
DYD1_k127_500450_1
3-demethylubiquinone-9 3-methyltransferase
-
-
-
0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001777
407.0
View
DYD1_k127_500450_2
Phenazine biosynthesis-like protein
-
-
-
0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000004275
299.0
View
DYD1_k127_500450_3
Belongs to the pseudouridine synthase RsuA family
K06178,K06183
-
5.4.99.19,5.4.99.22
0.0000000000000000000000000000000000000000000000000000000000001032
220.0
View
DYD1_k127_500450_4
Aminoacyl-tRNA editing domain
-
-
-
0.0000000000000000000000000000000000000000000001656
172.0
View
DYD1_k127_500450_5
Malate L-lactate dehydrogenase
K05884
-
1.1.1.337
0.00000000000000000000000000000000001345
148.0
View
DYD1_k127_500450_6
PFAM ErfK YbiS YcfS YnhG family protein
-
-
-
0.000000000000000000000000000001825
130.0
View
DYD1_k127_500450_7
Pathogenicity locus
-
-
-
0.0000000000000000000000000011
115.0
View
DYD1_k127_500450_8
dihydrofolate reductase
K00287
-
1.5.1.3
0.000000000000000000005278
100.0
View
DYD1_k127_500450_9
-
-
-
-
0.0000001742
59.0
View
DYD1_k127_5055246_0
Catalyzes the attachment of glutamate to tRNA(Glu) in a two-step reaction glutamate is first activated by ATP to form Glu-AMP and then transferred to the acceptor end of tRNA(Glu)
K01885
-
6.1.1.17
0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006036
436.0
View
DYD1_k127_5055246_1
PFAM peptidase S11, D-alanyl-D-alanine carboxypeptidase
K07258
-
3.4.16.4
0.000000000000000007118
89.0
View
DYD1_k127_5055246_2
Single strand-specific metallo-endoribonuclease involved in late-stage 70S ribosome quality control and in maturation of the 3' terminus of the 16S rRNA
K07042
-
-
0.000000000009702
70.0
View
DYD1_k127_5055246_3
DNA polymerase III is a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria. This DNA polymerase also exhibits 3' to 5' exonuclease activity
K02343
-
2.7.7.7
0.0000000001835
64.0
View
DYD1_k127_5055246_4
protein carbamoylation
-
-
-
0.0001517
53.0
View
DYD1_k127_5065316_0
aminopeptidase activity
K19689
-
-
0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001686
456.0
View
DYD1_k127_5065316_1
Carbohydrate phosphorylase
K00688,K00691
GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005886,GO:0016020,GO:0044424,GO:0044444,GO:0044464,GO:0071944
2.4.1.1,2.4.1.8
0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001229
369.0
View
DYD1_k127_5065316_2
DNA polymerase III is a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria. This DNA polymerase also exhibits 3' to 5' exonuclease activity
K02343
-
2.7.7.7
0.000000000000000000000000000000000000000000000144
186.0
View
DYD1_k127_5065316_3
Pyrophosphatase that catalyzes the hydrolysis of nucleoside triphosphates to their monophosphate derivatives, with a high preference for the non-canonical purine nucleotides XTP (xanthosine triphosphate), dITP (deoxyinosine triphosphate) and ITP. Seems to function as a house-cleaning enzyme that removes non-canonical purine nucleotides from the nucleotide pool, thus preventing their incorporation into DNA RNA and avoiding chromosomal lesions
K02428
GO:0003674,GO:0003824,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006139,GO:0006725,GO:0006753,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0009056,GO:0009058,GO:0009141,GO:0009143,GO:0009987,GO:0016462,GO:0016787,GO:0016817,GO:0016818,GO:0018130,GO:0019438,GO:0019439,GO:0019637,GO:0034404,GO:0034641,GO:0034654,GO:0034655,GO:0044237,GO:0044238,GO:0044248,GO:0044249,GO:0044270,GO:0044271,GO:0044281,GO:0044283,GO:0044424,GO:0044444,GO:0044464,GO:0046434,GO:0046483,GO:0046700,GO:0047429,GO:0055086,GO:0071704,GO:1901292,GO:1901360,GO:1901361,GO:1901362,GO:1901575,GO:1901576
3.6.1.66
0.000000000000000000000000000000000000000007752
160.0
View
DYD1_k127_506840_0
P-type ATPase
K17686
-
3.6.3.54
1.223e-203
657.0
View
DYD1_k127_506840_1
Cation transporter/ATPase, N-terminus
K01537
-
3.6.3.8
0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003954
576.0
View
DYD1_k127_506840_10
Domain of unknown function (DU1801)
-
-
-
0.0000000000000000000003111
101.0
View
DYD1_k127_506840_11
helix_turn_helix, Arsenical Resistance Operon Repressor
K03892
-
-
0.00000000000000000321
90.0
View
DYD1_k127_506840_12
mercury ion transmembrane transporter activity
K01533,K07213,K08364,K17686
-
3.6.3.4,3.6.3.54
0.00000000005147
65.0
View
DYD1_k127_506840_13
FMN_bind
-
-
-
0.0000003328
58.0
View
DYD1_k127_506840_14
E1-E2 ATPase
K01533,K17686
-
3.6.3.4,3.6.3.54
0.0000005342
57.0
View
DYD1_k127_506840_15
NQR2, RnfD, RnfE family
-
-
-
0.000005176
57.0
View
DYD1_k127_506840_16
His Kinase A (phosphoacceptor) domain
-
-
-
0.00003375
56.0
View
DYD1_k127_506840_17
Low-potential electron donor to a number of redox enzymes
K03839,K03840
-
-
0.0001243
51.0
View
DYD1_k127_506840_18
Thioredoxin
-
-
-
0.0001499
45.0
View
DYD1_k127_506840_2
Pyruvate flavodoxin/ferredoxin oxidoreductase, thiamine diP-bdg
K00174
-
1.2.7.11,1.2.7.3
0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004394
409.0
View
DYD1_k127_506840_3
Belongs to the DEAD box helicase family
K11927
GO:0003674,GO:0003724,GO:0003824,GO:0004004,GO:0004386,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006139,GO:0006725,GO:0006807,GO:0006950,GO:0006996,GO:0008026,GO:0008104,GO:0008150,GO:0008152,GO:0008186,GO:0009266,GO:0009408,GO:0009628,GO:0009987,GO:0010501,GO:0016043,GO:0016070,GO:0016462,GO:0016787,GO:0016817,GO:0016818,GO:0016887,GO:0017111,GO:0022607,GO:0022613,GO:0022618,GO:0032991,GO:0033036,GO:0034622,GO:0034641,GO:0035770,GO:0036464,GO:0042254,GO:0042255,GO:0042623,GO:0043170,GO:0043186,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043933,GO:0044085,GO:0044237,GO:0044238,GO:0044424,GO:0044444,GO:0044464,GO:0045495,GO:0046483,GO:0050896,GO:0051179,GO:0060293,GO:0065003,GO:0070035,GO:0070925,GO:0071704,GO:0071826,GO:0071840,GO:0090304,GO:0140098,GO:1901360,GO:1990904
3.6.4.13
0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000001624
302.0
View
DYD1_k127_506840_4
Pyruvate ferredoxin oxidoreductase beta subunit C terminal
-
-
-
0.00000000000000000000000000000000000000000000000000000000000000000000000000000000007574
285.0
View
DYD1_k127_506840_5
serine-type peptidase activity
-
-
-
0.0000000000000000000000000000000000000000000000000000000000000141
229.0
View
DYD1_k127_506840_6
Biogenesis protein
K02275,K09792,K17686
-
1.9.3.1,3.6.3.54
0.0000000000000000000000000000000000000000000000000000000001365
217.0
View
DYD1_k127_506840_7
COG0507 ATP-dependent exoDNAse (exonuclease V) alpha subunit - helicase superfamily I member
K01144
-
3.1.11.5
0.0000000000000000000000000000000000000000000000002544
187.0
View
DYD1_k127_506840_8
Flavin transferase that catalyzes the transfer of the FMN moiety of FAD and its covalent binding to the hydroxyl group of a threonine residue in a target flavoprotein
K03734
-
2.7.1.180
0.000000000000000000000000000000000003201
148.0
View
DYD1_k127_506840_9
TIGRFAM acetyl coenzyme A synthetase (ADP forming), alpha domain
K01905,K22224
-
6.2.1.13
0.000000000000000000000000000000000007221
142.0
View
DYD1_k127_5117919_0
Catalyzes the ATP-dependent conversion of 7-carboxy-7- deazaguanine (CDG) to 7-cyano-7-deazaguanine (preQ(0))
-
-
-
0.000000000000000000000000000000000000000000000000000000000000000000000000000715
272.0
View
DYD1_k127_5117919_1
Cell wall formation. Catalyzes the addition of glutamate to the nucleotide precursor UDP-N-acetylmuramoyl-L-alanine (UMA)
K01925
-
6.3.2.9
0.00000000000000000000000000000000000000000000000000000000000006344
230.0
View
DYD1_k127_5117919_2
Belongs to the glycosyltransferase 26 family
K05946
-
2.4.1.187
0.00000000000000000000000000000006228
135.0
View
DYD1_k127_5117919_3
Forms part of the ribosomal stalk which helps the ribosome interact with GTP-bound translation factors. Is thus essential for accurate translation
K02935
GO:0005575,GO:0005618,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005886,GO:0008150,GO:0016020,GO:0030312,GO:0040007,GO:0044424,GO:0044444,GO:0044464,GO:0071944
-
0.0000000000000000000000000000002093
127.0
View
DYD1_k127_5117919_4
Forms part of the ribosomal stalk, playing a central role in the interaction of the ribosome with GTP-bound translation factors
K02864
-
-
0.0000000000000000000000000000007475
127.0
View
DYD1_k127_5117919_5
Critical role in recombination and DNA repair. Helps process Holliday junction intermediates to mature products by catalyzing branch migration. Has a DNA unwinding activity characteristic of a DNA helicase with a 3'- to 5'- polarity. Unwinds branched duplex DNA (Y-DNA)
K03655
-
3.6.4.12
0.000000000000000832
80.0
View
DYD1_k127_5117919_6
Helix-turn-helix domain
-
-
-
0.000008332
52.0
View
DYD1_k127_5117919_7
PIN domain
-
-
-
0.0004736
48.0
View
DYD1_k127_5188264_0
helicase activity
-
-
-
0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003743
337.0
View
DYD1_k127_5188264_1
ABC transporter
K02003
-
-
0.00000000000000000000000000000000000000000000000000000000000000000000000000001198
267.0
View
DYD1_k127_5188264_2
ABC-type antimicrobial peptide transport system, permease component
K02004
-
-
0.0000000000000000000000000000000000000000000000000000000000000000000000002482
261.0
View
DYD1_k127_5188264_3
Evidence 5 No homology to any previously reported sequences
K09005
-
-
0.00000000000001249
80.0
View
DYD1_k127_5188264_4
Biotin-lipoyl like
-
-
-
0.00000000000141
78.0
View
DYD1_k127_5264249_0
transferase activity, transferring glycosyl groups
-
-
-
0.000000000000000000000000000000000000000000000001209
185.0
View
DYD1_k127_5264249_1
Glycosyltransferase like family 2
-
-
-
0.000000000000000000000000000000000000001911
160.0
View
DYD1_k127_5264249_2
NAD dependent epimerase dehydratase family
-
-
-
0.000000000000000000000000002232
124.0
View
DYD1_k127_5264249_3
Glycosyltransferase, group 1 family protein
K13668
GO:0000009,GO:0000030,GO:0003674,GO:0003824,GO:0004376,GO:0005575,GO:0005623,GO:0005886,GO:0006629,GO:0006643,GO:0006664,GO:0008150,GO:0008152,GO:0008610,GO:0009058,GO:0009247,GO:0009987,GO:0016020,GO:0016740,GO:0016757,GO:0016758,GO:0033164,GO:0040007,GO:0043750,GO:0044237,GO:0044238,GO:0044249,GO:0044255,GO:0044464,GO:0046467,GO:0070085,GO:0071704,GO:0071944,GO:0097502,GO:1901135,GO:1901137,GO:1901576,GO:1903509
2.4.1.346
0.00000000000000000001432
104.0
View
DYD1_k127_5264249_4
mannose-ethanolamine phosphotransferase activity
-
-
-
0.000000000000000002067
98.0
View
DYD1_k127_5264249_5
Belongs to the class I-like SAM-binding methyltransferase superfamily. gTMT family
K05928
-
2.1.1.95
0.0000000000000000136
93.0
View
DYD1_k127_5264249_6
NAD dependent epimerase dehydratase family
K01784
-
5.1.3.2
0.0000000005807
66.0
View
DYD1_k127_5264249_7
Tellurite resistance protein TehB
-
-
-
0.0000003988
56.0
View
DYD1_k127_5264249_8
-
-
-
-
0.0000006932
61.0
View
DYD1_k127_5264249_9
Lysylphosphatidylglycerol synthase TM region
K07027
-
-
0.000004551
58.0
View
DYD1_k127_5323065_0
Metal dependent phosphohydrolases with conserved 'HD' motif.
-
-
-
0.0000000000000000000000000000000000000000000000000000000000004547
215.0
View
DYD1_k127_5323065_2
B3/4 domain
-
-
-
0.000000000000000001001
94.0
View
DYD1_k127_5408180_0
Catalyzes the base-exchange of a guanine (G) residue with the queuine precursor 7-aminomethyl-7-deazaguanine (PreQ1) at position 34 (anticodon wobble position) in tRNAs with GU(N) anticodons (tRNA-Asp, -Asn, -His and -Tyr). Catalysis occurs through a double-displacement mechanism. The nucleophile active site attacks the C1' of nucleotide 34 to detach the guanine base from the RNA, forming a covalent enzyme-RNA intermediate. The proton acceptor active site deprotonates the incoming PreQ1, allowing a nucleophilic attack on the C1' of the ribose to form the product. After dissociation, two additional enzymatic reactions on the tRNA convert PreQ1 to queuine (Q), resulting in the hypermodified nucleoside queuosine (7-(((4,5-cis-dihydroxy-2- cyclopenten-1-yl)amino)methyl)-7-deazaguanosine)
K00773
-
2.4.2.29
0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001367
372.0
View
DYD1_k127_5408180_1
Transfers and isomerizes the ribose moiety from AdoMet to the 7-aminomethyl group of 7-deazaguanine (preQ1-tRNA) to give epoxyqueuosine (oQ-tRNA)
K07568
-
2.4.99.17
0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002827
323.0
View
DYD1_k127_5408180_2
Endonuclease IV plays a role in DNA repair. It cleaves phosphodiester bonds at apurinic or apyrimidinic sites (AP sites) to produce new 5'-ends that are base-free deoxyribose 5-phosphate residues. It preferentially attacks modified AP sites created by bleomycin and neocarzinostatin
K01151
-
3.1.21.2
0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007816
304.0
View
DYD1_k127_5408180_3
Belongs to the universal ribosomal protein uS2 family
K02967
GO:0003674,GO:0003735,GO:0005198,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0006412,GO:0006518,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0015935,GO:0019538,GO:0022626,GO:0022627,GO:0032991,GO:0034641,GO:0034645,GO:0043043,GO:0043170,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:0071704,GO:1901564,GO:1901566,GO:1901576,GO:1990904
-
0.00000000000000000000000000000000000000000000000000000000000000006122
229.0
View
DYD1_k127_5408180_4
Associates with the EF-Tu.GDP complex and induces the exchange of GDP to GTP. It remains bound to the aminoacyl-tRNA.EF- Tu.GTP complex up to the GTP hydrolysis stage on the ribosome
K02357
GO:0003674,GO:0003676,GO:0003723,GO:0003746,GO:0005488,GO:0006412,GO:0006414,GO:0006518,GO:0006807,GO:0008135,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0019538,GO:0034641,GO:0034645,GO:0043043,GO:0043170,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0071704,GO:0097159,GO:1901363,GO:1901564,GO:1901566,GO:1901576
-
0.0000000000000000000000000000000000002615
145.0
View
DYD1_k127_5408180_5
Catalyzes the oxidation of 5,10- methylenetetrahydrofolate to 5,10-methenyltetrahydrofolate and then the hydrolysis of 5,10-methenyltetrahydrofolate to 10- formyltetrahydrofolate
K01491
-
1.5.1.5,3.5.4.9
0.00000000000000000000000000000000000486
149.0
View
DYD1_k127_5408180_6
Catalyzes the reversible interconversion of serine and glycine with tetrahydrofolate (THF) serving as the one-carbon carrier. This reaction serves as the major source of one-carbon groups required for the biosynthesis of purines, thymidylate, methionine, and other important biomolecules. Also exhibits THF- independent aldolase activity toward beta-hydroxyamino acids, producing glycine and aldehydes, via a retro-aldol mechanism
K00600
-
2.1.2.1
0.00000000000000001083
87.0
View
DYD1_k127_5595956_0
Peptidase family M50
-
-
-
0.000000000000000000000000000000000000000000002814
171.0
View
DYD1_k127_5595956_1
Attaches a formyl group to the free amino group of methionyl-tRNA(fMet). The formyl group appears to play a dual role in the initiator identity of N-formylmethionyl-tRNA by promoting its recognition by IF2 and preventing the misappropriation of this tRNA by the elongation apparatus
K00604
GO:0003674,GO:0003824,GO:0004479,GO:0006139,GO:0006396,GO:0006399,GO:0006400,GO:0006412,GO:0006413,GO:0006464,GO:0006518,GO:0006725,GO:0006807,GO:0008033,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009451,GO:0009987,GO:0010467,GO:0016070,GO:0016740,GO:0016741,GO:0016742,GO:0019538,GO:0019988,GO:0034470,GO:0034641,GO:0034645,GO:0034660,GO:0036211,GO:0043043,GO:0043170,GO:0043412,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0046483,GO:0071704,GO:0071951,GO:0090304,GO:0140098,GO:0140101,GO:1901360,GO:1901564,GO:1901566,GO:1901576
2.1.2.9
0.000000000000000000000000000000000000002792
159.0
View
DYD1_k127_5595956_2
COG0491 Zn-dependent hydrolases, including glyoxylases
K01069
-
3.1.2.6
0.000000000000000000000000000000004902
134.0
View
DYD1_k127_5595956_3
-
-
-
-
0.000000000000000000000000011
113.0
View
DYD1_k127_5595956_4
Attaches a formyl group to the free amino group of methionyl-tRNA(fMet). The formyl group appears to play a dual role in the initiator identity of N-formylmethionyl-tRNA by promoting its recognition by IF2 and preventing the misappropriation of this tRNA by the elongation apparatus
K00604
GO:0003674,GO:0003824,GO:0004479,GO:0006139,GO:0006396,GO:0006399,GO:0006400,GO:0006412,GO:0006413,GO:0006464,GO:0006518,GO:0006725,GO:0006807,GO:0008033,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009451,GO:0009987,GO:0010467,GO:0016070,GO:0016740,GO:0016741,GO:0016742,GO:0019538,GO:0019988,GO:0034470,GO:0034641,GO:0034645,GO:0034660,GO:0036211,GO:0043043,GO:0043170,GO:0043412,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0046483,GO:0071704,GO:0071951,GO:0090304,GO:0140098,GO:0140101,GO:1901360,GO:1901564,GO:1901566,GO:1901576
2.1.2.9
0.00000000000000000000000008702
114.0
View
DYD1_k127_5595956_5
Rod-share determining protein MreBH
K03569
-
-
0.0000000000000000000001411
109.0
View
DYD1_k127_5595956_6
O-antigen ligase like membrane protein
-
-
-
0.0000000000005639
83.0
View
DYD1_k127_5595956_7
Involved in formation and maintenance of cell shape
K03570
GO:0003674,GO:0005488,GO:0005515,GO:0005575,GO:0005623,GO:0005886,GO:0008150,GO:0008360,GO:0009273,GO:0009987,GO:0016020,GO:0022603,GO:0022604,GO:0030428,GO:0042546,GO:0043621,GO:0044085,GO:0044464,GO:0050789,GO:0050793,GO:0050794,GO:0051128,GO:0065007,GO:0065008,GO:0071554,GO:0071840,GO:0071944
-
0.0000008077
60.0
View
DYD1_k127_5595956_8
Belongs to the bacterial ribosomal protein bL28 family
K02902
-
-
0.00004522
49.0
View
DYD1_k127_5637505_0
Belongs to the peptidase M16 family
-
-
-
0.00000000000000000000000000000000000000000000000000000000000000000000000000000001284
285.0
View
DYD1_k127_5637505_1
Belongs to the class-I aminoacyl-tRNA synthetase family
K01869
-
6.1.1.4
0.0000000000000000000000000000000000000000000000000000004055
201.0
View
DYD1_k127_5637505_2
domain protein
K02238
-
-
0.000000000000000000000000000000000000002085
158.0
View
DYD1_k127_5637505_3
Major role in the synthesis of nucleoside triphosphates other than ATP. The ATP gamma phosphate is transferred to the NDP beta phosphate via a ping-pong mechanism, using a phosphorylated active-site intermediate
K00940
-
2.7.4.6
0.000000000000000000000000000000000000005975
151.0
View
DYD1_k127_5637505_4
Competence protein ComEC
K02238
-
-
0.0000000000000001154
92.0
View
DYD1_k127_5637505_5
Competence protein ComEA
K02237
GO:0005575,GO:0005623,GO:0005886,GO:0016020,GO:0044464,GO:0071944
-
0.00000000000001057
82.0
View
DYD1_k127_5637505_6
PIN domain
-
-
-
0.0004444
48.0
View
DYD1_k127_5689616_0
Major Facilitator Superfamily
K18833
-
-
0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003019
460.0
View
DYD1_k127_5689616_1
Major Facilitator Superfamily
K18833
-
-
0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008669
422.0
View
DYD1_k127_5689616_10
Hydrolase
-
-
-
0.0000000000000000000386
98.0
View
DYD1_k127_5689616_11
Domain of unknown function (DUF378)
K09779
-
-
0.0000000000000134
76.0
View
DYD1_k127_5689616_12
Eukaryotic DNA topoisomerase I, catalytic core
K03168
-
5.99.1.2
0.000000000505
61.0
View
DYD1_k127_5689616_13
Protein of unknown function (DUF1761)
-
-
-
0.0000001665
58.0
View
DYD1_k127_5689616_14
-
-
-
-
0.000046
54.0
View
DYD1_k127_5689616_15
-
-
-
-
0.0001124
47.0
View
DYD1_k127_5689616_16
Cytochrome P450
-
-
-
0.0002577
53.0
View
DYD1_k127_5689616_2
ABC transporter C-terminal domain
K06158
-
-
0.000000000000000000000000000000000000000000000000000000000000000000000000633
266.0
View
DYD1_k127_5689616_3
Subtilase family
K01342
-
3.4.21.62
0.000000000000000000000000000000000000000000000000000000000000000003652
250.0
View
DYD1_k127_5689616_5
Glycosyl transferase, family 2
-
-
-
0.0000000000000000000000000000000000000000000000000001211
197.0
View
DYD1_k127_5689616_6
TspO/MBR family
K05770
GO:0003674,GO:0005488,GO:0005575,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0009987,GO:0016020,GO:0016021,GO:0031224,GO:0033013,GO:0044237,GO:0044425,GO:0046483,GO:0046906,GO:0071704,GO:0097159,GO:1901360,GO:1901363,GO:1901564
-
0.0000000000000000000000000000000000000000000002245
172.0
View
DYD1_k127_5689616_7
dTDP-4-dehydrorhamnose 3,5-epimerase activity
K01790
-
5.1.3.13
0.0000000000000000000000000000000000000885
148.0
View
DYD1_k127_5689616_8
Protein of unknown function (DUF1428)
-
-
-
0.000000000000000000000000000001411
124.0
View
DYD1_k127_5689616_9
Putative zinc ribbon domain
-
-
-
0.00000000000000000000003415
101.0
View
DYD1_k127_5698445_0
Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III
K01840,K15778
-
5.4.2.2,5.4.2.8
0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004236
351.0
View
DYD1_k127_5698445_1
Metal-dependent hydrolase
K07043
-
-
0.00000000000000000000000000000000003363
143.0
View
DYD1_k127_5698445_10
Mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase
-
-
-
0.0005579
50.0
View
DYD1_k127_5698445_2
oxidoreductase activity
-
-
-
0.000000000000000000000000000000002232
137.0
View
DYD1_k127_5698445_3
TIGRFAM bifunctional phosphoglucose phosphomannose isomerase
K15916
-
5.3.1.8,5.3.1.9
0.0000000000000000000000000000007599
128.0
View
DYD1_k127_5698445_4
HD domain
K06950
-
-
0.000000000000000000000000006073
119.0
View
DYD1_k127_5698445_5
Transferase hexapeptide repeat containing protein
K00973
-
2.7.7.24
0.000000000000000000002265
107.0
View
DYD1_k127_5698445_6
Belongs to the glycosyl hydrolase 5 (cellulase A) family
-
-
-
0.0000003346
62.0
View
DYD1_k127_5698445_7
DNA polymerase III, delta subunit
K02340
-
2.7.7.7
0.000002431
57.0
View
DYD1_k127_5698445_8
Haloacid dehalogenase-like hydrolase
K07025,K08723
-
3.1.3.5
0.000003246
57.0
View
DYD1_k127_5698445_9
-
-
-
-
0.0002223
43.0
View
DYD1_k127_5773062_0
Catalyzes the conversion of GDP-D-mannose to GDP-4- dehydro-6-deoxy-D-mannose
K01711
-
4.2.1.47
0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004269
448.0
View
DYD1_k127_5773062_1
Belongs to the NAD(P)-dependent epimerase dehydratase family. dTDP-glucose dehydratase subfamily
K01710
-
4.2.1.46
0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000143
404.0
View
DYD1_k127_5773062_10
oligosaccharyl transferase activity
K07151
-
2.4.99.18
0.0000000000000000000000151
113.0
View
DYD1_k127_5773062_11
Catalyzes the reduction of dTDP-6-deoxy-L-lyxo-4- hexulose to yield dTDP-L-rhamnose
K00067,K01790
-
1.1.1.133,5.1.3.13
0.0000000000000000000006057
104.0
View
DYD1_k127_5773062_12
Transcriptional regulatory protein, C terminal
K02483
-
-
0.000000000000000000005859
101.0
View
DYD1_k127_5773062_13
4-amino-4-deoxy-L-arabinose transferase activity
-
-
-
0.0000000000002132
83.0
View
DYD1_k127_5773062_14
PFAM glycosyl transferase family 39
-
-
-
0.000003978
59.0
View
DYD1_k127_5773062_15
sequence-specific DNA binding
-
-
-
0.00003554
49.0
View
DYD1_k127_5773062_16
Phage derived protein Gp49-like (DUF891)
-
-
-
0.00006767
49.0
View
DYD1_k127_5773062_17
Glycosyl transferase, family 2
-
-
-
0.0003206
53.0
View
DYD1_k127_5773062_2
Belongs to the UDP-glucose GDP-mannose dehydrogenase family
K00012
GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0044424,GO:0044464
1.1.1.22
0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004657
358.0
View
DYD1_k127_5773062_3
Belongs to the RNA methyltransferase TrmD family
K00554
-
2.1.1.228
0.000000000000000000000000000000000000000000000000000000000000000000004625
240.0
View
DYD1_k127_5773062_4
PFAM NAD-dependent epimerase dehydratase
K15856
-
1.1.1.281
0.00000000000000000000000000000000000000000000000000000000000000000001392
244.0
View
DYD1_k127_5773062_5
GtrA-like protein
K00721
-
2.4.1.83
0.00000000000000000000000000000000000000000000000000000000000000000003907
246.0
View
DYD1_k127_5773062_6
Glycosyl transferase family 2
-
-
-
0.000000000000000000000000000000000000000000000000000000000000005249
224.0
View
DYD1_k127_5773062_7
signal peptide peptidase SppA, 36K type
K04773
-
-
0.00000000000000000000000000000000000000000000000000000004537
208.0
View
DYD1_k127_5773062_8
Catalyzes the reduction of dTDP-6-deoxy-L-lyxo-4- hexulose to yield dTDP-L-rhamnose
K00067
-
1.1.1.133
0.0000000000000000000000000000003813
133.0
View
DYD1_k127_5773062_9
TIGRFAM cell envelope-related function transcriptional attenuator, LytR CpsA family
-
-
-
0.000000000000000000000001645
116.0
View
DYD1_k127_5835873_0
Aldo-keto reductase family 1, member A1b (aldehyde reductase)
K00002,K00011,K00555
GO:0003674,GO:0003824,GO:0004032,GO:0004033,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005886,GO:0005975,GO:0005996,GO:0006006,GO:0006063,GO:0006064,GO:0006081,GO:0006082,GO:0006091,GO:0006732,GO:0006766,GO:0006767,GO:0006790,GO:0006793,GO:0006796,GO:0006807,GO:0007275,GO:0007399,GO:0007417,GO:0007420,GO:0008106,GO:0008150,GO:0008152,GO:0009055,GO:0009056,GO:0009058,GO:0009108,GO:0009110,GO:0009987,GO:0016020,GO:0016051,GO:0016052,GO:0016053,GO:0016054,GO:0016319,GO:0016324,GO:0016491,GO:0016614,GO:0016616,GO:0019318,GO:0019585,GO:0019637,GO:0019640,GO:0019752,GO:0019852,GO:0019853,GO:0022900,GO:0032501,GO:0032502,GO:0032787,GO:0042364,GO:0042839,GO:0042840,GO:0043436,GO:0044237,GO:0044238,GO:0044248,GO:0044249,GO:0044272,GO:0044281,GO:0044282,GO:0044283,GO:0044424,GO:0044425,GO:0044444,GO:0044459,GO:0044464,GO:0045177,GO:0046185,GO:0046364,GO:0046365,GO:0046394,GO:0046395,GO:0047939,GO:0048513,GO:0048731,GO:0048856,GO:0051167,GO:0051186,GO:0051188,GO:0055114,GO:0060322,GO:0071704,GO:0071944,GO:0072329,GO:0090407,GO:0098590,GO:1901135,GO:1901137,GO:1901159,GO:1901564,GO:1901566,GO:1901575,GO:1901576,GO:1901685,GO:1901687
1.1.1.2,1.1.1.21,2.1.1.215,2.1.1.216
0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001797
332.0
View
DYD1_k127_5871691_0
Belongs to the bacterial ribosomal protein bL33 family
K02913
-
-
0.000001407
53.0
View
DYD1_k127_5927227_0
DNA polymerase
K02330,K03512
GO:0000724,GO:0000725,GO:0000726,GO:0003674,GO:0003824,GO:0003887,GO:0005488,GO:0006139,GO:0006259,GO:0006281,GO:0006284,GO:0006285,GO:0006287,GO:0006289,GO:0006302,GO:0006303,GO:0006310,GO:0006725,GO:0006807,GO:0006950,GO:0006974,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009314,GO:0009411,GO:0009416,GO:0009628,GO:0009987,GO:0010224,GO:0016740,GO:0016772,GO:0016779,GO:0016829,GO:0016835,GO:0018130,GO:0019438,GO:0030145,GO:0033554,GO:0034061,GO:0034641,GO:0034645,GO:0034654,GO:0043167,GO:0043169,GO:0043170,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044271,GO:0046483,GO:0046872,GO:0046914,GO:0050896,GO:0051575,GO:0051716,GO:0071704,GO:0071897,GO:0090304,GO:0097510,GO:0140097,GO:1901360,GO:1901362,GO:1901576
2.7.7.7
0.00000000004596
72.0
View
DYD1_k127_5948844_0
Chaperone
-
-
-
0.0000000007253
70.0
View
DYD1_k127_5948844_1
Bacterial Ig-like domain (group 3)
K20276
-
-
0.000000005836
69.0
View
DYD1_k127_6012563_0
Belongs to the class-II pyridine nucleotide-disulfide oxidoreductase family
K00384
-
1.8.1.9
0.0000000000000000000000000000000001285
138.0
View
DYD1_k127_6012563_1
Belongs to the thioredoxin family
K03671
-
-
0.000000000000000000000008128
105.0
View
DYD1_k127_6012563_2
Pfam PF02583
K21600
-
-
0.00000002055
60.0
View
DYD1_k127_6012563_3
Helix-turn-helix domain
-
-
-
0.0000008539
55.0
View
DYD1_k127_6039875_0
PFAM phosphoesterase, RecJ domain protein
K06881
-
3.1.13.3,3.1.3.7
0.0000002501
62.0
View
DYD1_k127_6079478_0
Produces ATP from ADP in the presence of a proton gradient across the membrane. The catalytic sites are hosted primarily by the beta subunits
K02112
-
3.6.3.14
2.058e-208
657.0
View
DYD1_k127_6079478_1
Belongs to the class-I aminoacyl-tRNA synthetase family
K04566
-
6.1.1.6
0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004237
371.0
View
DYD1_k127_6079478_2
Produces ATP from ADP in the presence of a proton gradient across the membrane. The alpha chain is a regulatory subunit
K02111
-
3.6.3.14
0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007698
349.0
View
DYD1_k127_6079478_3
Produces ATP from ADP in the presence of a proton gradient across the membrane. The gamma chain is believed to be important in regulating ATPase activity and the flow of protons through the CF(0) complex
K02115
GO:0003674,GO:0003824,GO:0005215,GO:0005575,GO:0005618,GO:0005622,GO:0005623,GO:0005886,GO:0006139,GO:0006163,GO:0006164,GO:0006725,GO:0006753,GO:0006754,GO:0006793,GO:0006796,GO:0006807,GO:0006810,GO:0006811,GO:0006812,GO:0008150,GO:0008152,GO:0008324,GO:0009058,GO:0009117,GO:0009123,GO:0009124,GO:0009126,GO:0009127,GO:0009141,GO:0009142,GO:0009144,GO:0009145,GO:0009150,GO:0009152,GO:0009156,GO:0009161,GO:0009165,GO:0009167,GO:0009168,GO:0009199,GO:0009201,GO:0009205,GO:0009206,GO:0009259,GO:0009260,GO:0009987,GO:0015075,GO:0015077,GO:0015078,GO:0015318,GO:0015399,GO:0015405,GO:0015672,GO:0015985,GO:0015986,GO:0016020,GO:0016462,GO:0016469,GO:0016787,GO:0016817,GO:0016818,GO:0016887,GO:0017111,GO:0017144,GO:0018130,GO:0019438,GO:0019637,GO:0019693,GO:0019829,GO:0022804,GO:0022853,GO:0022857,GO:0022890,GO:0030312,GO:0032991,GO:0033178,GO:0034220,GO:0034641,GO:0034654,GO:0036442,GO:0040007,GO:0042623,GO:0042625,GO:0042626,GO:0043492,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0044424,GO:0044425,GO:0044459,GO:0044464,GO:0044769,GO:0045259,GO:0045260,GO:0045261,GO:0045262,GO:0046034,GO:0046390,GO:0046483,GO:0046933,GO:0046961,GO:0051179,GO:0051234,GO:0055085,GO:0055086,GO:0071704,GO:0071944,GO:0072521,GO:0072522,GO:0090407,GO:0090662,GO:0098655,GO:0098660,GO:0098662,GO:0098796,GO:0098797,GO:0099131,GO:0099132,GO:1901135,GO:1901137,GO:1901293,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576,GO:1902600
-
0.000000000000000000000000000000000000000000000000000000172
204.0
View
DYD1_k127_6079478_4
Necessary for efficient RNA polymerase transcription elongation past template-encoded arresting sites. The arresting sites in DNA have the property of trapping a certain fraction of elongating RNA polymerases that pass through, resulting in locked ternary complexes. Cleavage of the nascent transcript by cleavage factors such as GreA or GreB allows the resumption of elongation from the new 3'terminus. GreA releases sequences of 2 to 3 nucleotides
K03624
-
-
0.00000000000000000000000000000001705
132.0
View
DYD1_k127_6079478_5
Produces ATP from ADP in the presence of a proton gradient across the membrane
K02114
-
-
0.000000000000005091
80.0
View
DYD1_k127_6306679_0
amino acids such as threonine, to avoid such errors, it has a posttransfer editing activity that hydrolyzes mischarged Thr-tRNA(Val) in a tRNA-dependent manner
K01873
-
6.1.1.9
0.0000000000000000000000000000000000000000000000000000000000000000000000000000000007177
287.0
View
DYD1_k127_6391652_0
A type II topoisomerase that negatively supercoils closed circular double-stranded (ds) DNA in an ATP-dependent manner to modulate DNA topology and maintain chromosomes in an underwound state. Negative supercoiling favors strand separation, and DNA replication, transcription, recombination and repair, all of which involve strand separation. Also able to catalyze the interconversion of other topological isomers of dsDNA rings, including catenanes and knotted rings. Type II topoisomerases break and join 2 DNA strands simultaneously in an ATP-dependent manner
K02470
GO:0003674,GO:0003824,GO:0003916,GO:0003918,GO:0005575,GO:0006139,GO:0006259,GO:0006265,GO:0006725,GO:0006807,GO:0006996,GO:0007059,GO:0008094,GO:0008150,GO:0008152,GO:0009295,GO:0009987,GO:0016043,GO:0016462,GO:0016787,GO:0016817,GO:0016818,GO:0016853,GO:0016887,GO:0017111,GO:0034641,GO:0042623,GO:0043170,GO:0044237,GO:0044238,GO:0044260,GO:0046483,GO:0051276,GO:0061505,GO:0071103,GO:0071704,GO:0071840,GO:0090304,GO:0140097,GO:1901360
5.99.1.3
0.0
1106.0
View
DYD1_k127_6391652_1
Type II IV secretion system protein
K02454,K02652
-
-
0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003286
464.0
View
DYD1_k127_6391652_10
TIGRFAM prepilin-type N-terminal cleavage methylation domain
-
-
-
0.0001912
50.0
View
DYD1_k127_6391652_2
twitching motility protein
K02669
GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0044424,GO:0044444,GO:0044464
-
0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008895
356.0
View
DYD1_k127_6391652_3
PFAM Bacterial type II secretion system protein F domain
K02653
-
-
0.000000000000000000000000000000000000000000000000000000000000000000000000004037
267.0
View
DYD1_k127_6391652_4
Cleaves type-4 fimbrial leader sequence and methylates the N-terminal (generally Phe) residue
K02654
-
3.4.23.43
0.000000000000000000000000000000000000001797
157.0
View
DYD1_k127_6391652_5
Belongs to the peptidase C1 family
-
-
-
0.000000000000000000002134
109.0
View
DYD1_k127_6391652_6
inorganic pyrophosphatase
K15986
GO:0003674,GO:0003824,GO:0004427,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006793,GO:0008150,GO:0008152,GO:0009987,GO:0016462,GO:0016787,GO:0016817,GO:0016818,GO:0044237,GO:0044424,GO:0044464
3.6.1.1
0.0000000000000000001135
94.0
View
DYD1_k127_6391652_7
DNA polymerase III
K02341
-
2.7.7.7
0.00000000000001587
82.0
View
DYD1_k127_6391652_8
Pfam:N_methyl_2
-
-
-
0.000009166
53.0
View
DYD1_k127_6391652_9
Prokaryotic N-terminal methylation motif
K02456,K02650,K02655
-
-
0.0000139
52.0
View
DYD1_k127_639210_0
dna ligase
K10747
GO:0003674,GO:0003824,GO:0003909,GO:0003910,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006139,GO:0006259,GO:0006260,GO:0006261,GO:0006266,GO:0006271,GO:0006273,GO:0006281,GO:0006725,GO:0006807,GO:0006950,GO:0006974,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0016070,GO:0016874,GO:0016886,GO:0022616,GO:0033554,GO:0034641,GO:0034645,GO:0043170,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044424,GO:0044464,GO:0046483,GO:0050896,GO:0051103,GO:0051716,GO:0071704,GO:0090304,GO:0140097,GO:1901360,GO:1901576
6.5.1.1,6.5.1.6,6.5.1.7
0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003011
384.0
View
DYD1_k127_639210_1
Filamentation induced by cAMP protein fic
-
-
-
0.00000000000000000000000000000000000000000000000000000000000000000003167
245.0
View
DYD1_k127_639210_2
Histone deacetylase domain
-
-
-
0.0000000000000000000000000000000000000003712
153.0
View
DYD1_k127_6400898_0
endonuclease III
K01247
-
3.2.2.21
0.000000000000000000000000000000000000000004892
162.0
View
DYD1_k127_6400898_1
Maf-like protein
K06287
-
-
0.0000000000000000000003467
103.0
View
DYD1_k127_6400898_2
Necessary for efficient RNA polymerase transcription elongation past template-encoded arresting sites. The arresting sites in DNA have the property of trapping a certain fraction of elongating RNA polymerases that pass through, resulting in locked ternary complexes. Cleavage of the nascent transcript by cleavage factors such as GreA or GreB allows the resumption of elongation from the new 3'terminus. GreA releases sequences of 2 to 3 nucleotides
K03624
-
-
0.00000000000000000001321
98.0
View
DYD1_k127_6431150_0
amino acids such as threonine, to avoid such errors, it has a posttransfer editing activity that hydrolyzes mischarged Thr-tRNA(Val) in a tRNA-dependent manner
K01873
-
6.1.1.9
0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004274
552.0
View
DYD1_k127_6431150_1
Protein of unknown function (DUF4012)
-
-
-
0.000000000000000000000000000000001563
147.0
View
DYD1_k127_6431150_2
This is one of the proteins that binds to the 5S RNA in the ribosome where it forms part of the central protuberance
K02897
-
-
0.000000000000003322
84.0
View
DYD1_k127_6470680_0
histone acetyltransferase, ELP3 family
K07739
-
2.3.1.48
0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001054
476.0
View
DYD1_k127_6470680_1
Glucose / Sorbosone dehydrogenase
-
-
-
0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000118
318.0
View
DYD1_k127_6470680_11
MazG nucleotide pyrophosphohydrolase domain
-
-
-
0.0003691
48.0
View
DYD1_k127_6470680_2
MFS/sugar transport protein
-
-
-
0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000007242
304.0
View
DYD1_k127_6470680_3
Catalyzes the conversion of dihydroorotate to orotate with quinone as electron acceptor
K00226,K00254,K02823,K17828
-
1.3.1.14,1.3.5.2,1.3.98.1
0.0000000000000000000000000000000000000000000000000000000000000000000000000000008065
276.0
View
DYD1_k127_6470680_4
DNA helicase
K03654
GO:0003674,GO:0003676,GO:0003677,GO:0003678,GO:0003824,GO:0004003,GO:0004386,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005694,GO:0005737,GO:0006139,GO:0006259,GO:0006281,GO:0006310,GO:0006725,GO:0006807,GO:0006950,GO:0006974,GO:0006996,GO:0008026,GO:0008094,GO:0008150,GO:0008152,GO:0009295,GO:0009378,GO:0009987,GO:0016043,GO:0016462,GO:0016787,GO:0016817,GO:0016818,GO:0016887,GO:0017111,GO:0032392,GO:0032508,GO:0033554,GO:0034641,GO:0042623,GO:0043138,GO:0043140,GO:0043170,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043590,GO:0044237,GO:0044238,GO:0044260,GO:0044424,GO:0044464,GO:0046483,GO:0050896,GO:0051276,GO:0051716,GO:0070035,GO:0071103,GO:0071704,GO:0071840,GO:0090304,GO:0097159,GO:0140097,GO:1901360,GO:1901363
3.6.4.12
0.000000000000000000000000000000000000000000000000000000000000000000000401
253.0
View
DYD1_k127_6470680_5
methyltransferase
-
-
-
0.00000000000000000000000000000000001104
145.0
View
DYD1_k127_6470680_6
VIT family
-
-
-
0.00000000000000000000000000000004403
132.0
View
DYD1_k127_6470680_7
Cytidylate kinase-like family
-
-
-
0.0000000000000000005369
94.0
View
DYD1_k127_6470680_8
VKc
-
-
-
0.0000000002333
67.0
View
DYD1_k127_6517171_0
Cytochrome c biogenesis protein
K06196
-
-
0.0000000000000000000000000000000000000009631
157.0
View
DYD1_k127_6517171_1
Required for disulfide bond formation in some periplasmic proteins. Acts by transferring its disulfide bond to other proteins and is reduced in the process
-
-
-
0.00000000000000000000000000000000000001435
154.0
View
DYD1_k127_6517171_2
Methylates the class 1 translation termination release factors RF1 PrfA and RF2 PrfB on the glutamine residue of the universally conserved GGQ motif
K02493
GO:0003674,GO:0003824,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0008150,GO:0008152,GO:0008168,GO:0008757,GO:0016740,GO:0016741,GO:0032259,GO:0044424,GO:0044444,GO:0044464
2.1.1.297
0.000000000000000000000000000000004766
140.0
View
DYD1_k127_6517171_3
Beta-propeller domains of methanol dehydrogenase type
K06872
-
-
0.0000000000000000000000000000003631
134.0
View
DYD1_k127_6517171_4
LemA family
K03744
-
-
0.00000000000000000000005661
99.0
View
DYD1_k127_6534333_0
that it carries out the mismatch recognition step. This protein has a weak ATPase activity
K03555
-
-
3.021e-195
638.0
View
DYD1_k127_6534333_1
This protein is involved in the repair of mismatches in DNA. It is required for dam-dependent methyl-directed DNA mismatch repair. May act as a molecular matchmaker , a protein that promotes the formation of a stable complex between two or more DNA-binding proteins in an ATP-dependent manner without itself being part of a final effector complex
K03572
-
-
0.000000000000000000000000000000000000000000000000000000000000000000000003844
259.0
View
DYD1_k127_6534333_2
Immunoglobulin-like domain of bacterial spore germination
-
-
-
0.000000000000000000000000271
111.0
View
DYD1_k127_6534333_3
PFAM blue (type 1) copper domain protein
-
-
-
0.0000000003953
66.0
View
DYD1_k127_653601_0
PFAM glycosyl transferase, family 51
-
-
-
0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004372
478.0
View
DYD1_k127_653601_1
Catalyzes the attachment of tyrosine to tRNA(Tyr) in a two-step reaction tyrosine is first activated by ATP to form Tyr- AMP and then transferred to the acceptor end of tRNA(Tyr)
K01866
GO:0003674,GO:0003824,GO:0004812,GO:0004831,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006082,GO:0006139,GO:0006399,GO:0006520,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0009987,GO:0016070,GO:0016874,GO:0016875,GO:0019752,GO:0034641,GO:0034660,GO:0043038,GO:0043039,GO:0043170,GO:0043436,GO:0044237,GO:0044238,GO:0044281,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0071704,GO:0090304,GO:0140098,GO:0140101,GO:1901360,GO:1901564
6.1.1.1
0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006925
356.0
View
DYD1_k127_653601_2
PFAM Glyoxalase bleomycin resistance protein dioxygenase
K08234
-
-
0.0000000000000000000000000000000000000000000000000000008986
194.0
View
DYD1_k127_653601_3
-
-
-
-
0.0000000000000000000000000000000000003141
150.0
View
DYD1_k127_653601_4
Digests double-stranded RNA. Involved in the processing of primary rRNA transcript to yield the immediate precursors to the large and small rRNAs (23S and 16S). Processes some mRNAs, and tRNAs when they are encoded in the rRNA operon. Processes pre- crRNA and tracrRNA of type II CRISPR loci if present in the organism
K03685
GO:0003674,GO:0003676,GO:0003723,GO:0003725,GO:0003824,GO:0004518,GO:0004519,GO:0004521,GO:0004525,GO:0004540,GO:0005488,GO:0006139,GO:0006396,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0009987,GO:0010467,GO:0016070,GO:0016787,GO:0016788,GO:0016891,GO:0016893,GO:0032296,GO:0034641,GO:0043170,GO:0044237,GO:0044238,GO:0046483,GO:0071704,GO:0090304,GO:0090305,GO:0090501,GO:0090502,GO:0097159,GO:0140098,GO:1901360,GO:1901363
3.1.26.3
0.0000000000000000000001212
100.0
View
DYD1_k127_653601_5
Protein of unknown function (DUF541)
K09807
GO:0005575,GO:0005623,GO:0042597,GO:0044464
-
0.000000000000000000001839
104.0
View
DYD1_k127_653601_6
Involved in transcription antitermination. Required for transcription of ribosomal RNA (rRNA) genes. Binds specifically to the boxA antiterminator sequence of the ribosomal RNA (rrn) operons
K03625
-
-
0.000000000000006783
81.0
View
DYD1_k127_653601_7
BFD-like [2Fe-2S] binding domain
K00111
-
1.1.5.3
0.000000001112
70.0
View
DYD1_k127_653601_8
Belongs to the phenylalanyl-tRNA synthetase beta subunit family. Type 1 subfamily
K01890
GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006082,GO:0006139,GO:0006399,GO:0006412,GO:0006418,GO:0006432,GO:0006518,GO:0006520,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009328,GO:0009987,GO:0010467,GO:0016070,GO:0019538,GO:0019752,GO:0032991,GO:0034641,GO:0034645,GO:0034660,GO:0043038,GO:0043039,GO:0043043,GO:0043170,GO:0043436,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044281,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0071704,GO:0090304,GO:1901360,GO:1901564,GO:1901566,GO:1901576,GO:1902494
6.1.1.20
0.000004655
54.0
View
DYD1_k127_6606082_0
Nucleotidyltransferase domain
-
-
-
0.0000001012
57.0
View
DYD1_k127_6606082_1
HEPN domain
-
-
-
0.0000003972
54.0
View
DYD1_k127_6668284_0
Aldo-keto reductase family 1, member A1b (aldehyde reductase)
K00002,K00011,K00555
GO:0003674,GO:0003824,GO:0004032,GO:0004033,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005886,GO:0005975,GO:0005996,GO:0006006,GO:0006063,GO:0006064,GO:0006081,GO:0006082,GO:0006091,GO:0006732,GO:0006766,GO:0006767,GO:0006790,GO:0006793,GO:0006796,GO:0006807,GO:0007275,GO:0007399,GO:0007417,GO:0007420,GO:0008106,GO:0008150,GO:0008152,GO:0009055,GO:0009056,GO:0009058,GO:0009108,GO:0009110,GO:0009987,GO:0016020,GO:0016051,GO:0016052,GO:0016053,GO:0016054,GO:0016319,GO:0016324,GO:0016491,GO:0016614,GO:0016616,GO:0019318,GO:0019585,GO:0019637,GO:0019640,GO:0019752,GO:0019852,GO:0019853,GO:0022900,GO:0032501,GO:0032502,GO:0032787,GO:0042364,GO:0042839,GO:0042840,GO:0043436,GO:0044237,GO:0044238,GO:0044248,GO:0044249,GO:0044272,GO:0044281,GO:0044282,GO:0044283,GO:0044424,GO:0044425,GO:0044444,GO:0044459,GO:0044464,GO:0045177,GO:0046185,GO:0046364,GO:0046365,GO:0046394,GO:0046395,GO:0047939,GO:0048513,GO:0048731,GO:0048856,GO:0051167,GO:0051186,GO:0051188,GO:0055114,GO:0060322,GO:0071704,GO:0071944,GO:0072329,GO:0090407,GO:0098590,GO:1901135,GO:1901137,GO:1901159,GO:1901564,GO:1901566,GO:1901575,GO:1901576,GO:1901685,GO:1901687
1.1.1.2,1.1.1.21,2.1.1.215,2.1.1.216
0.000000000000000000000000000000000000000000005159
166.0
View
DYD1_k127_6668284_1
YecM protein
-
-
-
0.00000000003757
67.0
View
DYD1_k127_6668284_2
Belongs to the Fur family
-
-
-
0.000000002726
63.0
View
DYD1_k127_6680902_0
Translation initiation factor IF-3, N-terminal domain
K02520
GO:0003674,GO:0003676,GO:0003723,GO:0003743,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006412,GO:0006413,GO:0006518,GO:0006807,GO:0006996,GO:0008135,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0016020,GO:0016043,GO:0019538,GO:0022411,GO:0032790,GO:0032984,GO:0032988,GO:0034641,GO:0034645,GO:0043021,GO:0043022,GO:0043043,GO:0043170,GO:0043603,GO:0043604,GO:0043933,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044424,GO:0044444,GO:0044464,GO:0044877,GO:0071704,GO:0071826,GO:0071840,GO:0097159,GO:1901363,GO:1901564,GO:1901566,GO:1901576,GO:1903008
-
0.00000000000000000000000000000000000000007588
157.0
View
DYD1_k127_6680902_1
Toxic component of a toxin-antitoxin (TA) module
K07171
-
-
0.000000000000000000000000000000000000001946
149.0
View
DYD1_k127_6680902_2
Belongs to the class-II aminoacyl-tRNA synthetase family. Phe-tRNA synthetase alpha subunit type 1 subfamily
K01889
-
6.1.1.20
0.000000000000000000000000000000002854
137.0
View
DYD1_k127_6680902_3
Binds directly to 23S ribosomal RNA and is necessary for the in vitro assembly process of the 50S ribosomal subunit. It is not involved in the protein synthesizing functions of that subunit
K02887
-
-
0.0000000000000000000000000007632
116.0
View
DYD1_k127_6680902_4
PFAM SpoVT AbrB domain protein
K07172
-
-
0.00000000002863
68.0
View
DYD1_k127_6680902_5
Belongs to the bacterial ribosomal protein bL35 family
K02916
-
-
0.000002135
52.0
View
DYD1_k127_6770358_0
Releases the supercoiling and torsional tension of DNA, which is introduced during the DNA replication and transcription, by transiently cleaving and rejoining one strand of the DNA duplex. Introduces a single-strand break via transesterification at a target site in duplex DNA. The scissile phosphodiester is attacked by the catalytic tyrosine of the enzyme, resulting in the formation of a DNA-(5'-phosphotyrosyl)-enzyme intermediate and the expulsion of a 3'-OH DNA strand. The free DNA strand then undergoes passage around the unbroken strand, thus removing DNA supercoils. Finally, in the religation step, the DNA 3'-OH attacks the covalent intermediate to expel the active-site tyrosine and restore the DNA phosphodiester backbone
K03168
-
5.99.1.2
0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005786
561.0
View
DYD1_k127_6770358_1
Rossmann fold nucleotide-binding protein involved in DNA uptake
K04096
-
-
0.0000000000000000000000000000000000000000000000000002734
195.0
View
DYD1_k127_6770358_2
MafB19-like deaminase
-
-
-
0.000000000000000000000000000000000000000000000000001574
192.0
View
DYD1_k127_6770358_3
Catalyzes the ATP-dependent amidation of deamido-NAD to form NAD. Uses ammonia as a nitrogen source
K01916
GO:0003674,GO:0003824,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006139,GO:0006725,GO:0006732,GO:0006733,GO:0006753,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0008795,GO:0009058,GO:0009108,GO:0009117,GO:0009165,GO:0009435,GO:0009987,GO:0016874,GO:0016879,GO:0016880,GO:0018130,GO:0019359,GO:0019362,GO:0019363,GO:0019438,GO:0019637,GO:0019674,GO:0034641,GO:0034654,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0044424,GO:0044464,GO:0046483,GO:0046496,GO:0051186,GO:0051188,GO:0055086,GO:0071704,GO:0072524,GO:0072525,GO:0090407,GO:1901293,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576
6.3.1.5
0.0000000000000000000000000000000000000000000000000379
188.0
View
DYD1_k127_6770358_4
Cytidylyltransferase-like
-
-
-
0.000000000000000000000000000000000000000000009801
169.0
View
DYD1_k127_6770358_5
Catalyzes the reversible adenylation of nicotinate mononucleotide (NaMN) to nicotinic acid adenine dinucleotide (NaAD)
K00969
GO:0000309,GO:0003674,GO:0003824,GO:0004515,GO:0006082,GO:0006139,GO:0006520,GO:0006531,GO:0006725,GO:0006732,GO:0006733,GO:0006753,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009066,GO:0009108,GO:0009117,GO:0009165,GO:0009435,GO:0009987,GO:0016740,GO:0016772,GO:0016779,GO:0018130,GO:0019355,GO:0019359,GO:0019362,GO:0019363,GO:0019438,GO:0019637,GO:0019674,GO:0019752,GO:0034627,GO:0034628,GO:0034641,GO:0034654,GO:0043436,GO:0043648,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0046483,GO:0046496,GO:0051186,GO:0051188,GO:0055086,GO:0070566,GO:0071704,GO:0072524,GO:0072525,GO:0090407,GO:1901293,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576,GO:1901605
2.7.7.18
0.00000000000000000000000000005874
123.0
View
DYD1_k127_6770358_6
HIT domain
-
-
-
0.00000000000000000009854
94.0
View
DYD1_k127_6791500_0
Elongation factor G, domain IV
K02355
-
-
2.599e-261
822.0
View
DYD1_k127_6791500_1
This protein promotes the GTP-dependent binding of aminoacyl-tRNA to the A-site of ribosomes during protein biosynthesis
K02358
-
-
0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002993
603.0
View
DYD1_k127_6791500_10
Binds 23S rRNA and is also seen to make contacts with the A and possibly P site tRNAs
K02878
-
-
0.0000000000000000000000000000000000000000001522
162.0
View
DYD1_k127_6791500_11
Catalyzes the reversible transfer of the terminal phosphate group between ATP and AMP. Plays an important role in cellular energy homeostasis and in adenine nucleotide metabolism
K00939
-
2.7.4.3
0.00000000000000000000000000000000000000006381
157.0
View
DYD1_k127_6791500_12
Binds to 23S rRNA. Forms part of two intersubunit bridges in the 70S ribosome
K02874
-
-
0.0000000000000000000000000000000000000001151
153.0
View
DYD1_k127_6791500_13
One of the primary rRNA binding proteins, it binds directly to 16S rRNA central domain where it helps coordinate assembly of the platform of the 30S subunit
K02994
GO:0003674,GO:0003735,GO:0005198,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0015935,GO:0022626,GO:0022627,GO:0032991,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:1990904
-
0.0000000000000000000000000000000000000001653
153.0
View
DYD1_k127_6791500_14
Located at the back of the 30S subunit body where it stabilizes the conformation of the head with respect to the body
K02988
-
-
0.000000000000000000000000000000000000000842
156.0
View
DYD1_k127_6791500_15
One of the primary rRNA binding proteins, it binds directly near the 3'-end of the 23S rRNA, where it nucleates assembly of the 50S subunit
K02906
-
-
0.00000000000000000000000000000000000005945
152.0
View
DYD1_k127_6791500_16
Involved in the binding of tRNA to the ribosomes
K02946
GO:0003674,GO:0003735,GO:0005198,GO:0005575,GO:0005618,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0005886,GO:0006412,GO:0006518,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0015935,GO:0016020,GO:0019538,GO:0030312,GO:0032991,GO:0034641,GO:0034645,GO:0040007,GO:0043043,GO:0043170,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044446,GO:0044464,GO:0071704,GO:0071944,GO:1901564,GO:1901566,GO:1901576,GO:1990904
-
0.000000000000000000000000000000000001138
141.0
View
DYD1_k127_6791500_17
Located on the platform of the 30S subunit, it bridges several disparate RNA helices of the 16S rRNA. Forms part of the Shine-Dalgarno cleft in the 70S ribosome
K02948
GO:0000028,GO:0000462,GO:0003674,GO:0003676,GO:0003723,GO:0003729,GO:0003735,GO:0005198,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0005886,GO:0006139,GO:0006364,GO:0006396,GO:0006412,GO:0006518,GO:0006725,GO:0006807,GO:0006996,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0015935,GO:0016020,GO:0016043,GO:0016070,GO:0016072,GO:0019538,GO:0019843,GO:0022607,GO:0022613,GO:0022618,GO:0022626,GO:0022627,GO:0030490,GO:0032991,GO:0034470,GO:0034622,GO:0034641,GO:0034645,GO:0034660,GO:0040007,GO:0042254,GO:0042255,GO:0042274,GO:0043043,GO:0043170,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043603,GO:0043604,GO:0043933,GO:0044085,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:0046483,GO:0048027,GO:0065003,GO:0070181,GO:0070925,GO:0071704,GO:0071826,GO:0071840,GO:0071944,GO:0090304,GO:0097159,GO:1901360,GO:1901363,GO:1901564,GO:1901566,GO:1901576,GO:1990904
-
0.00000000000000000000000000000000008727
136.0
View
DYD1_k127_6791500_18
Protein S19 forms a complex with S13 that binds strongly to the 16S ribosomal RNA
K02965
GO:0000028,GO:0003674,GO:0003735,GO:0005198,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0006996,GO:0008150,GO:0009987,GO:0015935,GO:0016043,GO:0022607,GO:0022613,GO:0022618,GO:0022626,GO:0022627,GO:0032991,GO:0034622,GO:0042254,GO:0042255,GO:0042274,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043933,GO:0044085,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:0065003,GO:0070925,GO:0071826,GO:0071840,GO:1990904
-
0.000000000000000000000000000000002002
130.0
View
DYD1_k127_6791500_19
Located at the top of the head of the 30S subunit, it contacts several helices of the 16S rRNA. In the 70S ribosome it contacts the 23S rRNA (bridge B1a) and protein L5 of the 50S subunit (bridge B1b), connecting the 2 subunits
K02952
GO:0003674,GO:0003735,GO:0005198,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0006412,GO:0006518,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0015935,GO:0019538,GO:0022613,GO:0032991,GO:0034641,GO:0034645,GO:0042254,GO:0043043,GO:0043170,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043603,GO:0043604,GO:0044085,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044446,GO:0044464,GO:0071704,GO:0071840,GO:1901564,GO:1901566,GO:1901576,GO:1990904
-
0.0000000000000000000000000000001763
127.0
View
DYD1_k127_6791500_2
The central subunit of the protein translocation channel SecYEG. Consists of two halves formed by TMs 1-5 and 6-10. These two domains form a lateral gate at the front which open onto the bilayer between TMs 2 and 7, and are clamped together by SecE at the back. The channel is closed by both a pore ring composed of hydrophobic SecY resides and a short helix (helix 2A) on the extracellular side of the membrane which forms a plug. The plug probably moves laterally to allow the channel to open. The ring and the pore may move independently
K03076
-
-
0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007324
334.0
View
DYD1_k127_6791500_20
Forms part of the polypeptide exit tunnel
K02926
GO:0003674,GO:0003676,GO:0003723,GO:0003735,GO:0005198,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0006412,GO:0006518,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0015934,GO:0019538,GO:0022625,GO:0022626,GO:0032991,GO:0034641,GO:0034645,GO:0043043,GO:0043170,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:0071704,GO:0097159,GO:1901363,GO:1901564,GO:1901566,GO:1901576,GO:1990904
-
0.000000000000000000000000000009436
128.0
View
DYD1_k127_6791500_21
Binds to the 23S rRNA
K02876
GO:0003674,GO:0003735,GO:0005198,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0006412,GO:0006518,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0015934,GO:0019538,GO:0022625,GO:0022626,GO:0032991,GO:0034641,GO:0034645,GO:0043043,GO:0043170,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:0071704,GO:1901564,GO:1901566,GO:1901576,GO:1990904
-
0.00000000000000000000000000007953
121.0
View
DYD1_k127_6791500_22
This is one of the proteins that binds and probably mediates the attachment of the 5S RNA into the large ribosomal subunit, where it forms part of the central protuberance
K02881
GO:0003674,GO:0003676,GO:0003723,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0008097,GO:0015934,GO:0019843,GO:0022625,GO:0022626,GO:0032991,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:0097159,GO:1901363,GO:1990904
-
0.0000000000000000000000177
104.0
View
DYD1_k127_6791500_23
Ribosomal protein L17
K02879
-
-
0.00000000000000000516
91.0
View
DYD1_k127_6791500_24
One of the early assembly proteins it binds 23S rRNA. One of the proteins that surrounds the polypeptide exit tunnel on the outside of the ribosome. Forms the main docking site for trigger factor binding to the ribosome
K02892
-
-
0.00000000000000001301
85.0
View
DYD1_k127_6791500_25
One of the proteins that surrounds the polypeptide exit tunnel on the outside of the subunit
K02895
GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0006412,GO:0006518,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0015934,GO:0019538,GO:0022625,GO:0022626,GO:0032991,GO:0034641,GO:0034645,GO:0043043,GO:0043170,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:0071704,GO:1901564,GO:1901566,GO:1901576,GO:1990904
-
0.0000000000000000227
85.0
View
DYD1_k127_6791500_26
One of the primary rRNA binding proteins, it binds specifically to the 5'-end of 16S ribosomal RNA
K02961
-
-
0.000000000000001895
78.0
View
DYD1_k127_6791500_27
One of the essential components for the initiation of protein synthesis. Stabilizes the binding of IF-2 and IF-3 on the 30S subunit to which N-formylmethionyl-tRNA(fMet) subsequently binds. Helps modulate mRNA selection, yielding the 30S pre- initiation complex (PIC). Upon addition of the 50S ribosomal subunit IF-1, IF-2 and IF-3 are released leaving the mature 70S translation initation complex
K02518
GO:0003674,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0043021,GO:0043022,GO:0044424,GO:0044444,GO:0044464,GO:0044877
-
0.0000000000001704
74.0
View
DYD1_k127_6791500_28
Binds 16S rRNA, required for the assembly of 30S particles and may also be responsible for determining the conformation of the 16S rRNA at the A site
K02954
GO:0000028,GO:0003674,GO:0003735,GO:0005198,GO:0005575,GO:0005618,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0006412,GO:0006518,GO:0006807,GO:0006996,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0015935,GO:0016043,GO:0019538,GO:0022607,GO:0022613,GO:0022618,GO:0022626,GO:0022627,GO:0030312,GO:0032991,GO:0034622,GO:0034641,GO:0034645,GO:0042254,GO:0042255,GO:0042274,GO:0043043,GO:0043170,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043603,GO:0043604,GO:0043933,GO:0044085,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:0065003,GO:0070925,GO:0071704,GO:0071826,GO:0071840,GO:0071944,GO:1901564,GO:1901566,GO:1901576,GO:1990904
-
0.0000000000002033
72.0
View
DYD1_k127_6791500_29
Belongs to the bacterial ribosomal protein bL36 family
K02919
-
-
0.000000000003364
66.0
View
DYD1_k127_6791500_3
One of the primary rRNA binding proteins. Required for association of the 30S and 50S subunits to form the 70S ribosome, for tRNA binding and peptide bond formation. It has been suggested to have peptidyltransferase activity
K02886
-
-
0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001795
319.0
View
DYD1_k127_6791500_30
The globular domain of the protein is located near the polypeptide exit tunnel on the outside of the subunit, while an extended beta-hairpin is found that lines the wall of the exit tunnel in the center of the 70S ribosome
K02890
GO:0003674,GO:0003735,GO:0005198,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0015934,GO:0022625,GO:0022626,GO:0032991,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:1990904
-
0.000000007065
63.0
View
DYD1_k127_6791500_4
DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates
K03040
GO:0003674,GO:0003824,GO:0003899,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006139,GO:0006351,GO:0006354,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0016070,GO:0016740,GO:0016772,GO:0016779,GO:0018130,GO:0019438,GO:0032774,GO:0034062,GO:0034641,GO:0034645,GO:0034654,GO:0043170,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044271,GO:0044424,GO:0044464,GO:0046483,GO:0071704,GO:0090304,GO:0097659,GO:0097747,GO:0140098,GO:1901360,GO:1901362,GO:1901576
2.7.7.6
0.0000000000000000000000000000000000000000000000000000000000000000000000002748
258.0
View
DYD1_k127_6791500_5
Binds the lower part of the 30S subunit head. Binds mRNA in the 70S ribosome, positioning it for translation
K02982
-
-
0.0000000000000000000000000000000000000000000000000000000000000002116
227.0
View
DYD1_k127_6791500_6
This is 1 of the proteins that binds and probably mediates the attachment of the 5S RNA into the large ribosomal subunit, where it forms part of the central protuberance. In the 70S ribosome it contacts protein S13 of the 30S subunit (bridge B1b), connecting the 2 subunits
K02931
GO:0000027,GO:0003674,GO:0003676,GO:0003723,GO:0003735,GO:0005198,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0006412,GO:0006518,GO:0006807,GO:0006996,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0015934,GO:0016043,GO:0019538,GO:0022607,GO:0022613,GO:0022618,GO:0022625,GO:0022626,GO:0032991,GO:0034622,GO:0034641,GO:0034645,GO:0042254,GO:0042255,GO:0042273,GO:0043043,GO:0043170,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043603,GO:0043604,GO:0043933,GO:0044085,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:0065003,GO:0070925,GO:0071704,GO:0071826,GO:0071840,GO:0097159,GO:1901363,GO:1901564,GO:1901566,GO:1901576,GO:1990904
-
0.000000000000000000000000000000000000000000000000000000000002428
214.0
View
DYD1_k127_6791500_7
This protein binds to the 23S rRNA, and is important in its secondary structure. It is located near the subunit interface in the base of the L7 L12 stalk, and near the tRNA binding site of the peptidyltransferase center
K02933
GO:0002181,GO:0003674,GO:0003676,GO:0003723,GO:0003735,GO:0005198,GO:0005488,GO:0005575,GO:0005618,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0005886,GO:0006412,GO:0006518,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0015934,GO:0016020,GO:0019538,GO:0022625,GO:0022626,GO:0030312,GO:0032991,GO:0034641,GO:0034645,GO:0040007,GO:0043043,GO:0043170,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:0071704,GO:0071944,GO:0097159,GO:1901363,GO:1901564,GO:1901566,GO:1901576,GO:1990904
-
0.00000000000000000000000000000000000000000000000000000001439
203.0
View
DYD1_k127_6791500_8
One of the primary rRNA binding proteins, it binds directly to 16S rRNA where it nucleates assembly of the body of the 30S subunit
K02986
GO:0003674,GO:0003676,GO:0003723,GO:0003735,GO:0005198,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005840,GO:0006417,GO:0006450,GO:0008150,GO:0009889,GO:0009891,GO:0009893,GO:0010468,GO:0010556,GO:0010557,GO:0010604,GO:0010608,GO:0010628,GO:0015935,GO:0019222,GO:0019843,GO:0031323,GO:0031325,GO:0031326,GO:0031328,GO:0032268,GO:0032270,GO:0032991,GO:0034248,GO:0034250,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044446,GO:0044464,GO:0045727,GO:0045903,GO:0048518,GO:0048522,GO:0050789,GO:0050794,GO:0051171,GO:0051173,GO:0051246,GO:0051247,GO:0060255,GO:0065007,GO:0065008,GO:0080090,GO:0097159,GO:1901363,GO:1990904,GO:2000112
-
0.00000000000000000000000000000000000000000000000000002864
194.0
View
DYD1_k127_6791500_9
Metallopeptidase family M24
K01265
-
3.4.11.18
0.0000000000000000000000000000000000000000000000000005283
192.0
View
DYD1_k127_67928_0
RNA polymerase that catalyzes the synthesis of short RNA molecules used as primers for DNA polymerase during DNA replication
K02316
-
-
0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000005203
311.0
View
DYD1_k127_6845403_0
PFAM Magnesium chelatase, ChlI subunit
K07391
-
-
0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000298
351.0
View
DYD1_k127_6845403_1
-
-
-
-
0.000000000000000000000000000441
127.0
View
DYD1_k127_718302_0
Is required not only for elongation of protein synthesis but also for the initiation of all mRNA translation through initiator tRNA(fMet) aminoacylation
K01874
GO:0003674,GO:0003824,GO:0004812,GO:0004825,GO:0006082,GO:0006139,GO:0006399,GO:0006412,GO:0006418,GO:0006431,GO:0006518,GO:0006520,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0016070,GO:0016874,GO:0016875,GO:0019538,GO:0019752,GO:0034641,GO:0034645,GO:0034660,GO:0043038,GO:0043039,GO:0043043,GO:0043170,GO:0043436,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044281,GO:0046483,GO:0071704,GO:0090304,GO:0140098,GO:0140101,GO:1901360,GO:1901564,GO:1901566,GO:1901576
6.1.1.10
0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000588
412.0
View
DYD1_k127_718302_1
Belongs to the helicase family. UvrD subfamily
K03657
-
3.6.4.12
0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002533
432.0
View
DYD1_k127_718302_10
Trp repressor protein
K03720
-
-
0.0001792
48.0
View
DYD1_k127_718302_11
acetyltransferase
K03823
-
2.3.1.183
0.0004528
48.0
View
DYD1_k127_718302_2
Dolichyl-phosphate-mannose-protein mannosyltransferase
K00728
-
2.4.1.109
0.0000000000000000000000000000000000000000000000000000000000000000000000000000001292
284.0
View
DYD1_k127_718302_3
transferase activity, transferring glycosyl groups
-
-
-
0.000000000000000000000000000000000000000000000000000000002595
218.0
View
DYD1_k127_718302_4
PFAM RmuC family
K09760
-
-
0.00000000000000000000000000000000000000000000000000002507
202.0
View
DYD1_k127_718302_5
UbiA prenyltransferase family
-
-
-
0.0000000000000000000000000000000000000000000000000002488
197.0
View
DYD1_k127_718302_6
PFAM Glycosyl transferase family 4
K02851
-
2.7.8.33,2.7.8.35
0.00000000000000000000000000000000000000000002515
175.0
View
DYD1_k127_718302_7
COG0084 Mg-dependent DNase
K03424
-
-
0.00000000000000000000000000000000000000001458
164.0
View
DYD1_k127_718302_8
Dolichyl-phosphate-mannose-protein mannosyltransferase
-
-
-
0.0000000002611
73.0
View
DYD1_k127_718302_9
thiolester hydrolase activity
-
-
-
0.000000003282
66.0
View
DYD1_k127_736672_0
Nucleotidyl transferase AbiEii toxin, Type IV TA system
-
-
-
0.0000000000000000000000000000000000000000000000000000000000000000000231
241.0
View
DYD1_k127_736672_1
Psort location Cytoplasmic, score
-
-
-
0.000000000000000000000000000000000000004087
154.0
View
DYD1_k127_817474_0
Eukaryotic DNA topoisomerase I, catalytic core
K03168
-
5.99.1.2
0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000002746
298.0
View
DYD1_k127_847308_0
An RNase that has 5'-3' exonuclease and possibly endonuclease activity. Involved in maturation of rRNA and in some organisms also mRNA maturation and or decay
K12574
-
-
0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008251
386.0
View
DYD1_k127_847308_1
ATP-dependent serine protease that mediates the selective degradation of mutant and abnormal proteins as well as certain short-lived regulatory proteins. Required for cellular homeostasis and for survival from DNA damage and developmental changes induced by stress. Degrades polypeptides processively to yield small peptide fragments that are 5 to 10 amino acids long. Binds to DNA in a double-stranded, site-specific manner
K01338
-
3.4.21.53
0.0000000000000000000000000000000000000000000000000000000000000000000000000002067
269.0
View
DYD1_k127_847308_10
protein homooligomerization
K21919
GO:0003674,GO:0005488,GO:0005515,GO:0042802,GO:0043621,GO:0097602
-
0.00000001607
67.0
View
DYD1_k127_847308_11
Bacterial Ig-like domain (group 3)
-
-
-
0.00006179
51.0
View
DYD1_k127_847308_2
Uracil DNA glycosylase superfamily
K21929
-
3.2.2.27
0.00000000000000000000000000000000000000000001075
169.0
View
DYD1_k127_847308_3
Na( ) H( ) antiporter that extrudes sodium in exchange for external protons
-
-
-
0.00000000000000000000000000000000002329
142.0
View
DYD1_k127_847308_4
pfkB family carbohydrate kinase
-
-
-
0.0000000000000000000000000001634
126.0
View
DYD1_k127_847308_5
Ribose/Galactose Isomerase
K01808
-
5.3.1.6
0.0000000000000000000000004311
111.0
View
DYD1_k127_847308_6
Pfam:DUF59
-
-
-
0.00000000000000000000001102
104.0
View
DYD1_k127_847308_7
Belongs to the LOG family
K06966
-
3.2.2.10
0.000000000000000000001389
103.0
View
DYD1_k127_847308_8
-
-
-
-
0.00000000000000000000839
93.0
View
DYD1_k127_847308_9
Ribulose-phosphate 3 epimerase family
K01783
-
5.1.3.1
0.000000000000000007209
92.0
View
DYD1_k127_900652_0
Belongs to the peptidase M48B family
K03799
-
-
0.0000000000000000000000000000000000000000000000000000000000000000000000000841
257.0
View
DYD1_k127_900652_1
DNA-directed DNA polymerase activity
K02347,K04477
-
-
0.000000000000000000000000000000000000000000000000000002113
203.0
View
DYD1_k127_900652_2
PFAM LemA family protein
K03744
-
-
0.000000000000000000000002794
109.0
View
DYD1_k127_94816_0
assembly protein SufB
K09014
GO:0003674,GO:0003824,GO:0004518,GO:0004519,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006139,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0009987,GO:0016787,GO:0016788,GO:0034641,GO:0040007,GO:0043170,GO:0044237,GO:0044238,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0071704,GO:0090304,GO:0090305,GO:1901360
-
0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003192
468.0
View
DYD1_k127_94816_1
Iron ABC transporter ATP-binding protein
K09013
-
-
0.0000000000000004524
78.0
View
DYD1_k127_94816_2
FeS assembly protein SufD
K09015
-
-
0.00000001864
59.0
View
DYD1_k127_952376_0
PFAM Glycosyl transferase family 2
K07011
-
-
0.000000000000000000000000000000000000000000000000000756
194.0
View
DYD1_k127_952376_1
polysaccharide biosynthetic process
K03328
-
-
0.000000000000000000000000000000000000000000002319
183.0
View
DYD1_k127_952376_2
PFAM Glycosyl transferase family 2
K21349
-
2.4.1.268
0.000000000000000000000000000000000000002149
158.0
View
DYD1_k127_952376_3
Glycosyl transferase, family 2
K12984
-
-
0.0000000000000000000000000000000000000256
155.0
View
DYD1_k127_952376_4
Glycosyl transferases group 1
-
-
-
0.0000000000000000000000000000000000001854
155.0
View
DYD1_k127_952376_5
PFAM glycosyl transferase family 39
-
-
-
0.000000000000000000000000000000009091
145.0
View
DYD1_k127_952376_6
Glycosyl transferase, family 2
-
-
-
0.000000000000000000000000000000272
134.0
View
DYD1_k127_952376_7
oligosaccharyl transferase activity
K07151
-
2.4.99.18
0.00000000001657
76.0
View
DYD1_k127_96012_0
Belongs to the class-V pyridoxal-phosphate-dependent aminotransferase family
K11717
-
2.8.1.7,4.4.1.16
0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001244
357.0
View
DYD1_k127_96012_1
Endonuclease that specifically degrades the RNA of RNA- DNA hybrids
K03470
GO:0003674,GO:0003824,GO:0004518,GO:0004519,GO:0004521,GO:0004523,GO:0004540,GO:0005575,GO:0005622,GO:0005623,GO:0006139,GO:0006259,GO:0006260,GO:0006261,GO:0006271,GO:0006273,GO:0006281,GO:0006298,GO:0006401,GO:0006725,GO:0006807,GO:0006950,GO:0006974,GO:0008150,GO:0008152,GO:0009056,GO:0009057,GO:0009058,GO:0009059,GO:0009987,GO:0016070,GO:0016787,GO:0016788,GO:0016891,GO:0016893,GO:0019439,GO:0022616,GO:0032299,GO:0032991,GO:0033554,GO:0033567,GO:0034641,GO:0034645,GO:0034655,GO:0043137,GO:0043170,GO:0044237,GO:0044238,GO:0044248,GO:0044249,GO:0044260,GO:0044265,GO:0044270,GO:0044424,GO:0044464,GO:0046483,GO:0046700,GO:0050896,GO:0051716,GO:0071704,GO:0090304,GO:0090305,GO:0090501,GO:0090502,GO:0140098,GO:1901360,GO:1901361,GO:1901575,GO:1901576
3.1.26.4
0.0000000000000000000000000000000000000000007297
165.0
View
DYD1_k127_96012_2
Oxidoreductase FAD-binding domain
K00529,K05784
-
1.18.1.3
0.00000000000000000000000001413
118.0
View
DYD1_k127_96012_3
Protein of unknown function DUF84
-
GO:0003674,GO:0003824,GO:0016462,GO:0016787,GO:0016817,GO:0016818,GO:0017111
-
0.000000000000000000000002045
110.0
View
DYD1_k127_96012_4
Uncharacterized protein family (UPF0051)
K09015
-
-
0.000000000000000001621
87.0
View
DYD1_k127_96012_5
COG0822 NifU homolog involved in Fe-S cluster formation
K04488
-
-
0.00000000000007597
76.0
View
DYD1_k127_96012_6
electron transfer activity
K00441,K02051,K05337
-
1.12.98.1
0.000006962
53.0
View
DYD1_k127_970493_0
Catalyzes the methylthiolation of N6- (dimethylallyl)adenosine (i(6)A), leading to the formation of 2- methylthio-N6-(dimethylallyl)adenosine (ms(2)i(6)A) at position 37 in tRNAs that read codons beginning with uridine
K06168
-
2.8.4.3
0.0000000000000000000000000000000000000000000000001921
187.0
View
DYD1_k127_970493_1
PFAM S-adenosyl-l-methionine hydroxide adenosyltransferase
-
-
-
0.0000000000000000000000000000000000000000000001486
179.0
View
DYD1_k127_970493_2
Domain of unknown function (DUF4173)
-
-
-
0.0000000000000194
87.0
View
DYD1_k127_970493_3
Involved in protein export. Acts as a chaperone by maintaining the newly synthesized protein in an open conformation. Functions as a peptidyl-prolyl cis-trans isomerase
K03545
GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0044424,GO:0044464
-
0.000000000001759
78.0
View
DYD1_k127_980468_0
Part of the ABC transporter FtsEX involved in cellular division
K09811
GO:0005575,GO:0005576,GO:0005618,GO:0005623,GO:0005886,GO:0005887,GO:0008150,GO:0009987,GO:0016020,GO:0016021,GO:0030312,GO:0031224,GO:0031226,GO:0040007,GO:0044425,GO:0044459,GO:0044464,GO:0051301,GO:0071944
-
0.0000000000000000000008251
103.0
View
DYD1_k127_980468_1
membrane
-
-
-
0.00000000000000000007532
103.0
View
DYD1_k127_980468_2
Peptidase, M23 family
K21471
-
-
0.0001295
54.0
View
