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Overview

ID MAG00883
Name DYD1_bin.72
Sample SMP0025
Taxonomy
Kingdom Bacteria
Phylum Pseudomonadota
Class Gammaproteobacteria
Order Acidiferrobacterales
Family SPGG2
Genus SZUA-472
Species
Assembly information
Completeness (%) 80.74
Contamination (%) 4.36
GC content (%) 65.0
N50 (bp) 9,961
Genome size (bp) 2,601,357

Location

Module

Module ID Module name Total genes Total steps Contain genes Contain steps Percentage of genes Percentage of steps

Genes2670

Gene name Description KEGG GOs EC E-value Score Sequence
DYD1_k127_1001106_0 Cell wall formation. Adds enolpyruvyl to UDP-N- acetylglucosamine K00790 - 2.5.1.7 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002067 614.0
DYD1_k127_1001106_1 Arabinose 5-phosphate isomerase K06041 GO:0000271,GO:0003674,GO:0003824,GO:0005975,GO:0005976,GO:0005996,GO:0006082,GO:0006629,GO:0008150,GO:0008152,GO:0008610,GO:0008653,GO:0009058,GO:0009059,GO:0009103,GO:0009987,GO:0016051,GO:0016053,GO:0016853,GO:0016860,GO:0016861,GO:0019146,GO:0019294,GO:0019752,GO:0033692,GO:0034637,GO:0034645,GO:0043170,GO:0043436,GO:0044237,GO:0044238,GO:0044249,GO:0044255,GO:0044260,GO:0044262,GO:0044264,GO:0044281,GO:0044283,GO:0046364,GO:0046394,GO:0046400,GO:0071704,GO:1901135,GO:1901137,GO:1901576,GO:1903509 5.3.1.13 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006904 412.0
DYD1_k127_1001106_10 Involved in the assembly of lipopolysaccharide (LPS). Required for the translocation of LPS from the inner membrane to the outer membrane. May form a bridge between the inner membrane and the outer membrane, via interactions with LptC and LptD, thereby facilitating LPS transfer across the periplasm K09774 - - 0.000000000000006191 81.0
DYD1_k127_1001106_11 Involved in the assembly of lipopolysaccharide (LPS). Required for the translocation of LPS from the inner membrane to the outer membrane. Facilitates the transfer of LPS from the inner membrane to the periplasmic protein LptA. Could be a docking site for LptA K11719 - - 0.000000000001807 73.0
DYD1_k127_1001106_12 Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released K03092 - - 0.0004604 43.0
DYD1_k127_1001106_2 ABC-type multidrug transport system, ATPase component K01990 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007717 358.0
DYD1_k127_1001106_3 PFAM ABC transporter K06861 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002232 332.0
DYD1_k127_1001106_4 Catalyzes the sequential NAD-dependent oxidations of L- histidinol to L-histidinaldehyde and then to L-histidine K00013 - 1.1.1.23 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001097 329.0
DYD1_k127_1001106_5 PFAM ABC-2 type transporter K01992 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001663 316.0
DYD1_k127_1001106_6 Catalyzes the condensation of ATP and 5-phosphoribose 1- diphosphate to form N'-(5'-phosphoribosyl)-ATP (PR-ATP). Has a crucial role in the pathway because the rate of histidine biosynthesis seems to be controlled primarily by regulation of HisG enzymatic activity K00765 - 2.4.2.17 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000002596 280.0
DYD1_k127_1001106_7 Involved in the biosynthesis of lipopolysaccharides (LPSs). Catalyzes the hydrolysis of 3-deoxy-D-manno-octulosonate 8-phosphate (KDO 8-P) to 3-deoxy-D-manno-octulosonate (KDO) and inorganic phosphate K03270 GO:0000271,GO:0003674,GO:0003824,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005975,GO:0005976,GO:0006629,GO:0006793,GO:0006796,GO:0008150,GO:0008152,GO:0008610,GO:0008653,GO:0008781,GO:0009058,GO:0009059,GO:0009103,GO:0009987,GO:0016051,GO:0016311,GO:0016740,GO:0016772,GO:0016779,GO:0016787,GO:0016788,GO:0016791,GO:0019143,GO:0033692,GO:0034637,GO:0034645,GO:0042578,GO:0043170,GO:0044237,GO:0044238,GO:0044249,GO:0044255,GO:0044260,GO:0044262,GO:0044264,GO:0044424,GO:0044444,GO:0044464,GO:0070567,GO:0071704,GO:1901135,GO:1901137,GO:1901576,GO:1903509 3.1.3.45 0.0000000000000000000000000000000000000000000000000000005661 205.0
DYD1_k127_1001106_8 Glutaredoxin - - - 0.00000000000000000000000000000000000003679 145.0
DYD1_k127_1001106_9 Belongs to the BolA IbaG family - - - 0.00000000000000000000004719 101.0
DYD1_k127_1016142_0 PFAM ABC transporter related K01990 - - 0.0000000000000000000000000000000000000000000000001298 193.0
DYD1_k127_1016142_1 COG3093 Plasmid maintenance system antidote protein K21498 - - 0.00000000000000000000000006402 109.0
DYD1_k127_1016142_2 Could accelerate the degradation of some genes transcripts potentially through selective RNA binding K03563 - - 0.00000000000000000000001983 100.0
DYD1_k127_1016142_3 GntR family transcriptional regulator K07979 - - 0.0000000000000000000001354 102.0
DYD1_k127_1016142_4 Helix-turn-helix domain K07497 - - 0.00000000005596 66.0
DYD1_k127_1016142_5 DDE domain - - - 0.0000000001234 66.0
DYD1_k127_1016142_6 COG1961 Site-specific recombinases, DNA invertase Pin homologs - - - 0.00002678 52.0
DYD1_k127_1043611_0 Catalyzes the ATP-dependent amination of UTP to CTP with either L-glutamine or ammonia as the source of nitrogen. Regulates intracellular CTP levels through interactions with the four ribonucleotide triphosphates K01937 - 6.3.4.2 2.272e-265 827.0
DYD1_k127_1043611_1 Catalyzes the reversible conversion of 2- phosphoglycerate into phosphoenolpyruvate. It is essential for the degradation of carbohydrates via glycolysis K01689 - 4.2.1.11 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001229 575.0
DYD1_k127_1043611_2 Component of the acetyl coenzyme A carboxylase (ACC) complex. First, biotin carboxylase catalyzes the carboxylation of biotin on its carrier protein (BCCP) and then the CO(2) group is transferred by the carboxyltransferase to acetyl-CoA to form malonyl-CoA K01962 - 2.1.3.15,6.4.1.2 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001588 466.0
DYD1_k127_1043611_3 Belongs to the KdsA family K01627 - 2.5.1.55 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000242 426.0
DYD1_k127_1043611_4 Ligates lysine onto the cytidine present at position 34 of the AUA codon-specific tRNA(Ile) that contains the anticodon CAU, in an ATP-dependent manner. Cytidine is converted to lysidine, thus changing the amino acid specificity of the tRNA from methionine to isoleucine K04075 - 6.3.4.19 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002533 337.0
DYD1_k127_1043611_5 Essential cell division protein. May link together the upstream cell division proteins, which are predominantly cytoplasmic, with the downstream cell division proteins, which are predominantly periplasmic K05589 GO:0000003,GO:0000910,GO:0003674,GO:0005488,GO:0005515,GO:0005575,GO:0005623,GO:0007049,GO:0008150,GO:0009987,GO:0019954,GO:0022402,GO:0022414,GO:0030428,GO:0032153,GO:0032505,GO:0042802,GO:0043093,GO:0044464,GO:0051301 - 0.0000000000000000000004027 104.0
DYD1_k127_1043611_6 Bacterial DNA polymerase III alpha subunit K02337 GO:0003674,GO:0003824,GO:0003887,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006139,GO:0006259,GO:0006260,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009360,GO:0009987,GO:0016740,GO:0016772,GO:0016779,GO:0018130,GO:0019438,GO:0032991,GO:0034061,GO:0034641,GO:0034645,GO:0034654,GO:0042575,GO:0043170,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044271,GO:0044424,GO:0044444,GO:0044464,GO:0044776,GO:0046483,GO:0061695,GO:0071704,GO:0071897,GO:0090304,GO:0140097,GO:1901360,GO:1901362,GO:1901576,GO:1902494,GO:1990234 2.7.7.7 0.00000000000000000001061 96.0
DYD1_k127_1091845_0 Transcriptional regulator, AbiEi antitoxin - - - 0.00000000000000000000000000000000000000000000000000007496 193.0
DYD1_k127_1091845_1 Putative heavy-metal chelation - - - 0.000000000000000000000000000000000000000000002944 171.0
DYD1_k127_1091845_2 Excalibur calcium-binding domain - - - 0.0000000000000000000000000000002032 125.0
DYD1_k127_1091845_3 Protein of unknown function (DUF433) - - - 0.000000000000000000003737 94.0
DYD1_k127_1091845_4 PFAM Glyoxalase bleomycin resistance protein dioxygenase - - - 0.0000000001637 68.0
DYD1_k127_1091845_5 - - - - 0.0000000588 56.0
DYD1_k127_1091845_6 Belongs to the DapA family K01714 - 4.3.3.7 0.0000001698 57.0
DYD1_k127_1121189_0 One of the primary rRNA binding proteins. Required for association of the 30S and 50S subunits to form the 70S ribosome, for tRNA binding and peptide bond formation. It has been suggested to have peptidyltransferase activity K02886 GO:0000027,GO:0002181,GO:0003674,GO:0003676,GO:0003723,GO:0003735,GO:0005198,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0006412,GO:0006518,GO:0006807,GO:0006996,GO:0008150,GO:0008152,GO:0008270,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0015934,GO:0016043,GO:0019538,GO:0022607,GO:0022613,GO:0022618,GO:0022625,GO:0022626,GO:0032991,GO:0034622,GO:0034641,GO:0034645,GO:0042254,GO:0042255,GO:0042273,GO:0043043,GO:0043167,GO:0043169,GO:0043170,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043603,GO:0043604,GO:0043933,GO:0044085,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:0046872,GO:0046914,GO:0065003,GO:0070925,GO:0071704,GO:0071826,GO:0071840,GO:0097159,GO:1901363,GO:1901564,GO:1901566,GO:1901576,GO:1990904 - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005637 379.0
DYD1_k127_1121189_1 Binds the lower part of the 30S subunit head. Binds mRNA in the 70S ribosome, positioning it for translation K02982 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007499 324.0
DYD1_k127_1121189_10 Binds 16S rRNA, required for the assembly of 30S particles and may also be responsible for determining the conformation of the 16S rRNA at the A site K02954 - - 0.000000000000000000000000000001305 125.0
DYD1_k127_1121189_11 One of the primary rRNA binding proteins, it binds specifically to the 5'-end of 16S ribosomal RNA K02961 - - 0.00000000000000000000000000000235 124.0
DYD1_k127_1121189_12 This is one of the proteins that binds and probably mediates the attachment of the 5S RNA into the large ribosomal subunit, where it forms part of the central protuberance K02881 - - 0.0000000000000007555 79.0
DYD1_k127_1121189_13 Ribosomal L29 protein K02904 - - 0.000000000007168 70.0
DYD1_k127_1121189_2 This is 1 of the proteins that binds and probably mediates the attachment of the 5S RNA into the large ribosomal subunit, where it forms part of the central protuberance. In the 70S ribosome it contacts protein S13 of the 30S subunit (bridge B1b), connecting the 2 subunits K02931 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000831 280.0
DYD1_k127_1121189_3 This protein binds to the 23S rRNA, and is important in its secondary structure. It is located near the subunit interface in the base of the L7 L12 stalk, and near the tRNA binding site of the peptidyltransferase center K02933 GO:0000027,GO:0002181,GO:0003674,GO:0003676,GO:0003723,GO:0003735,GO:0005198,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0006412,GO:0006518,GO:0006807,GO:0006996,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0015934,GO:0016043,GO:0019538,GO:0019843,GO:0022607,GO:0022613,GO:0022618,GO:0022625,GO:0022626,GO:0032991,GO:0034622,GO:0034641,GO:0034645,GO:0042254,GO:0042255,GO:0042273,GO:0043043,GO:0043170,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043603,GO:0043604,GO:0043933,GO:0044085,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:0065003,GO:0070180,GO:0070925,GO:0071704,GO:0071826,GO:0071840,GO:0097159,GO:1901363,GO:1901564,GO:1901566,GO:1901576,GO:1990904 - 0.000000000000000000000000000000000000000000000000000000000000000000008892 238.0
DYD1_k127_1121189_4 Binds 23S rRNA and is also seen to make contacts with the A and possibly P site tRNAs K02878 - - 0.00000000000000000000000000000000000000000000000000000000000008778 214.0
DYD1_k127_1121189_5 Binds to 23S rRNA. Forms part of two intersubunit bridges in the 70S ribosome K02874 GO:0003674,GO:0003676,GO:0003723,GO:0003735,GO:0005198,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0015934,GO:0019843,GO:0022625,GO:0022626,GO:0032991,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:0070180,GO:0097159,GO:1901363,GO:1990904 - 0.00000000000000000000000000000000000000000000000000000000001223 212.0
DYD1_k127_1121189_6 One of the primary rRNA binding proteins, it binds directly to 16S rRNA central domain where it helps coordinate assembly of the platform of the 30S subunit K02994 - - 0.0000000000000000000000000000000000000000000003007 169.0
DYD1_k127_1121189_7 Protein S19 forms a complex with S13 that binds strongly to the 16S ribosomal RNA K02965 - - 0.000000000000000000000000000000000000000005701 156.0
DYD1_k127_1121189_8 One of the proteins that surrounds the polypeptide exit tunnel on the outside of the subunit K02895 - - 0.00000000000000000000000000000000000000002771 154.0
DYD1_k127_1121189_9 The globular domain of the protein is located near the polypeptide exit tunnel on the outside of the subunit, while an extended beta-hairpin is found that lines the wall of the exit tunnel in the center of the 70S ribosome K02890 GO:0003674,GO:0003735,GO:0005198,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0005844,GO:0006412,GO:0006518,GO:0006807,GO:0006996,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0015934,GO:0016043,GO:0019538,GO:0022607,GO:0022613,GO:0022618,GO:0022625,GO:0022626,GO:0032991,GO:0034622,GO:0034641,GO:0034645,GO:0042254,GO:0042255,GO:0042788,GO:0043043,GO:0043170,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043603,GO:0043604,GO:0043933,GO:0044085,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:0065003,GO:0070925,GO:0071704,GO:0071826,GO:0071840,GO:1901564,GO:1901566,GO:1901576,GO:1990904 - 0.00000000000000000000000000000000000001951 148.0
DYD1_k127_1135990_0 CoA-transferase family III - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001325 447.0
DYD1_k127_1135990_1 N-terminal half of MaoC dehydratase K09709,K18291 - 4.2.1.153,4.2.1.56 0.0000000000000000000000000000000000000000000000000000000000000002164 227.0
DYD1_k127_1135990_2 protein possibly involved in utilization of glycolate and propanediol - - - 0.00000000000000000000000000000000000000000000000000000000003156 209.0
DYD1_k127_1169443_0 COG0501 Zn-dependent protease with chaperone function - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001329 323.0
DYD1_k127_1169443_1 PFAM ABC transporter related K02013 - 3.6.3.34 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002415 321.0
DYD1_k127_1169443_2 Nitroreductase family K19286 - 1.5.1.39 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006029 321.0
DYD1_k127_1169443_3 KR domain K00059 - 1.1.1.100 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002608 309.0
DYD1_k127_1169443_4 PFAM Cysteine-rich secretory protein family - - - 0.0000000000000000000000000000000000000000000000000006589 193.0
DYD1_k127_1169443_5 PFAM Rhomboid family protein - - - 0.0000000000000000000000000000000000000827 153.0
DYD1_k127_1169443_6 acetyltransferase - - - 0.000000000000000000001777 101.0
DYD1_k127_1169443_7 Transcriptional regulator K03566 - - 0.00000000004904 66.0
DYD1_k127_1186080_0 Catalyzes the biosynthesis of agmatine from arginine K01585 - 4.1.1.19 7.126e-255 799.0
DYD1_k127_1186080_1 Arginyl-tRNA synthetase K01887 - 6.1.1.19 9.882e-254 794.0
DYD1_k127_1186080_10 peptidase S16, lon K07157 - - 0.000000000000000000000000000000000000000005537 164.0
DYD1_k127_1186080_11 Cytochrome C oxidase, cbb3-type, subunit III - - - 0.0000000000000000000000000001469 123.0
DYD1_k127_1186080_12 Sporulation related domain - - - 0.00000000000000000000008294 109.0
DYD1_k127_1186080_13 Bacterial protein of unknown function (Gcw_chp) - - - 0.0000000000000000001928 91.0
DYD1_k127_1186080_14 Bacterial protein of unknown function (DUF945) - - - 0.000000000000000003487 98.0
DYD1_k127_1186080_15 Membrane fusogenic activity K09806 - - 0.00000000003235 68.0
DYD1_k127_1186080_16 Bacterial protein of unknown function (Gcw_chp) - - - 0.00000002507 64.0
DYD1_k127_1186080_17 Bacterial protein of unknown function (Gcw_chp) - - - 0.00001378 50.0
DYD1_k127_1186080_18 zinc ion binding K11997,K12035 - 2.3.2.27 0.00002093 53.0
DYD1_k127_1186080_2 PFAM Magnesium chelatase, ChlI subunit K07391 - - 2.976e-195 621.0
DYD1_k127_1186080_3 Releases the supercoiling and torsional tension of DNA, which is introduced during the DNA replication and transcription, by transiently cleaving and rejoining one strand of the DNA duplex. Introduces a single-strand break via transesterification at a target site in duplex DNA. The scissile phosphodiester is attacked by the catalytic tyrosine of the enzyme, resulting in the formation of a DNA-(5'-phosphotyrosyl)-enzyme intermediate and the expulsion of a 3'-OH DNA strand. The free DNA strand then undergoes passage around the unbroken strand, thus removing DNA supercoils. Finally, in the religation step, the DNA 3'-OH attacks the covalent intermediate to expel the active-site tyrosine and restore the DNA phosphodiester backbone K03168 GO:0003674,GO:0003824,GO:0003916,GO:0003917,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006139,GO:0006259,GO:0006265,GO:0006725,GO:0006807,GO:0006996,GO:0008150,GO:0008152,GO:0009987,GO:0016043,GO:0016853,GO:0034641,GO:0043170,GO:0044237,GO:0044238,GO:0044260,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0051276,GO:0071103,GO:0071704,GO:0071840,GO:0090304,GO:0140097,GO:1901360 5.99.1.2 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008305 536.0
DYD1_k127_1186080_4 Adenylyl cyclase class-3 4 guanylyl cyclase K01768 - 4.6.1.1 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007065 538.0
DYD1_k127_1186080_5 Reutilizes the intact tripeptide L-alanyl-gamma-D- glutamyl-meso-diaminopimelate by linking it to UDP-N- acetylmuramate K02558 - 6.3.2.45 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007529 532.0
DYD1_k127_1186080_6 MltA specific insert domain K08304 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001541 390.0
DYD1_k127_1186080_7 Catalyzes the irreversible transfer of a propylamine group from the amino donor S-adenosylmethioninamine (decarboxy- AdoMet) to putrescine (1,4-diaminobutane) to yield spermidine K00797 - 2.5.1.16 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001135 361.0
DYD1_k127_1186080_8 Exonuclease involved in the 3' processing of various precursor tRNAs. Initiates hydrolysis at the 3'-terminus of an RNA molecule and releases 5'-mononucleotides K03684 GO:0000175,GO:0003674,GO:0003824,GO:0004518,GO:0004527,GO:0004532,GO:0004540,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006139,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0008408,GO:0009987,GO:0016070,GO:0016787,GO:0016788,GO:0016796,GO:0016896,GO:0033890,GO:0034641,GO:0043170,GO:0044237,GO:0044238,GO:0044424,GO:0044464,GO:0046483,GO:0071704,GO:0090304,GO:0090305,GO:0090501,GO:0090503,GO:0140098,GO:1901360 3.1.13.5 0.0000000000000000000000000000000000000000000000000000000000000000000000000000002839 282.0
DYD1_k127_1186080_9 Thiol disulfide interchange protein K03673 GO:0005575,GO:0005623,GO:0042597,GO:0044464 - 0.0000000000000000000000000000000000000000000017 172.0
DYD1_k127_1198867_0 gamma-glutamyltransferase K00681 - 2.3.2.2,3.4.19.13 5.585e-198 645.0
DYD1_k127_1198867_1 Tripartite ATP-independent periplasmic transporter, DctM component - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004896 586.0
DYD1_k127_1198867_2 Part of the tripartite ATP-independent periplasmic (TRAP) transport system - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001032 484.0
DYD1_k127_1198867_3 Belongs to the transferase hexapeptide repeat family K00674 - 2.3.1.117 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007739 380.0
DYD1_k127_1198867_4 Fumarylacetoacetate (FAA) hydrolase family - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004062 337.0
DYD1_k127_1198867_5 regulation of cobalamin metabolic process K11390 GO:0000287,GO:0003674,GO:0003824,GO:0004474,GO:0005488,GO:0008150,GO:0009987,GO:0016043,GO:0016740,GO:0016746,GO:0016829,GO:0016830,GO:0016833,GO:0019222,GO:0022607,GO:0030656,GO:0031323,GO:0043167,GO:0043169,GO:0043933,GO:0044085,GO:0046872,GO:0046912,GO:0047777,GO:0050789,GO:0050794,GO:0051171,GO:0051193,GO:0051259,GO:0051260,GO:0062012,GO:0065003,GO:0065007,GO:0070206,GO:0070207,GO:0071840,GO:0106064,GO:1901401 - 0.00000000000000000000000000000000000000000000000000000000000000000000000000001898 269.0
DYD1_k127_1198867_6 PFAM Rhodanese domain protein K01011 - 2.8.1.1,2.8.1.2 0.00000000000000000000000000000000000000000000000000000000000000000000000001009 255.0
DYD1_k127_1198867_7 TRAP-type mannitol chloroaromatic compound transport system small permease component - - - 0.000000000000000000000000000000000000000000000000003344 187.0
DYD1_k127_1200140_0 Part of the Sec protein translocase complex. Interacts with the SecYEG preprotein conducting channel. Has a central role in coupling the hydrolysis of ATP to the transfer of proteins into and across the cell membrane, serving both as a receptor for the preprotein-SecB complex and as an ATP-driven molecular motor driving the stepwise translocation of polypeptide chains across the membrane K03070 - - 5.641e-312 966.0
DYD1_k127_1200140_1 COG0739 Membrane proteins related to metalloendopeptidases - - - 0.00000000019 62.0
DYD1_k127_1200405_0 serine threonine protein kinase K12132 - 2.7.11.1 6.955e-264 837.0
DYD1_k127_1200405_1 Catalyzes the hydrolysis of N-succinyl-L,L- diaminopimelic acid (SDAP), forming succinate and LL-2,6- diaminoheptanedioate (DAP), an intermediate involved in the bacterial biosynthesis of lysine and meso-diaminopimelic acid, an essential component of bacterial cell walls K01439 - 3.5.1.18 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001963 479.0
DYD1_k127_1200405_2 Belongs to the transferase hexapeptide repeat family K00674 - 2.3.1.117 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000411 419.0
DYD1_k127_1200405_3 DNA-dependent ATPase involved in processing of recombination intermediates, plays a role in repairing DNA breaks. Stimulates the branch migration of RecA-mediated strand transfer reactions, allowing the 3' invading strand to extend heteroduplex DNA faster. Binds ssDNA in the presence of ADP but not other nucleotides, has ATPase activity that is stimulated by ssDNA and various branched DNA structures, but inhibited by SSB. Does not have RecA's homology-searching function K04485 GO:0000725,GO:0003674,GO:0003676,GO:0003677,GO:0003697,GO:0003824,GO:0005488,GO:0006139,GO:0006259,GO:0006281,GO:0006310,GO:0006725,GO:0006807,GO:0006950,GO:0006974,GO:0008094,GO:0008150,GO:0008152,GO:0009314,GO:0009628,GO:0009987,GO:0016462,GO:0016787,GO:0016817,GO:0016818,GO:0016887,GO:0017111,GO:0033554,GO:0034641,GO:0042623,GO:0043170,GO:0044237,GO:0044238,GO:0044260,GO:0046483,GO:0050896,GO:0051716,GO:0071704,GO:0090304,GO:0097159,GO:1901360,GO:1901363 - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002981 357.0
DYD1_k127_1200405_4 phosphatase K01090,K20074 - 3.1.3.16 0.0000000000000000000000000000000000000000000000000000000000000001523 233.0
DYD1_k127_1200405_5 Pyridoxal 5'-phosphate (PLP)-binding protein, which is involved in PLP homeostasis K06997 - - 0.000000000000000000000000000000000000000000000000000015 198.0
DYD1_k127_1200405_6 Inner membrane component of T3SS, cytoplasmic domain - - - 0.0000000000000000000000000000000000000003096 157.0
DYD1_k127_1200405_7 COG0739 Membrane proteins related to metalloendopeptidases - - - 0.0000000000526 64.0
DYD1_k127_1205301_0 Belongs to the class-II pyridoxal-phosphate-dependent aminotransferase family. Histidinol-phosphate aminotransferase subfamily K00817 - 2.6.1.9 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005255 469.0
DYD1_k127_1205301_1 Catalyzes the transfer of the enolpyruvyl moiety of phosphoenolpyruvate (PEP) to the 5-hydroxyl of shikimate-3- phosphate (S3P) to produce enolpyruvyl shikimate-3-phosphate and inorganic phosphate K00800 - 2.5.1.19 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002495 454.0
DYD1_k127_1205301_2 PFAM Prephenate dehydratase K14170 - 4.2.1.51,5.4.99.5 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000751 453.0
DYD1_k127_1205301_3 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002423 315.0
DYD1_k127_1205301_4 Prephenate dehydrogenase K00210,K04517 - 1.3.1.12 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006065 305.0
DYD1_k127_1221239_0 Catalyzes the condensation of para-aminobenzoate (pABA) with 6-hydroxymethyl-7,8-dihydropterin diphosphate (DHPt-PP) to form 7,8-dihydropteroate (H2Pte), the immediate precursor of folate derivatives K00796 - 2.5.1.15 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000177 328.0
DYD1_k127_1221239_1 Acts as a processive, ATP-dependent zinc metallopeptidase for both cytoplasmic and membrane proteins. Plays a role in the quality control of integral membrane proteins K03798 - - 0.0000000000000000000000000000000000000000000000000000000000000006926 223.0
DYD1_k127_1221239_2 Catalyzes the conversion of glucosamine-6-phosphate to glucosamine-1-phosphate K03431 - 5.4.2.10 0.00000000000000000000341 94.0
DYD1_k127_1222992_0 Required for accurate and efficient protein synthesis under certain stress conditions. May act as a fidelity factor of the translation reaction, by catalyzing a one-codon backward translocation of tRNAs on improperly translocated ribosomes. Back- translocation proceeds from a post-translocation (POST) complex to a pre-translocation (PRE) complex, thus giving elongation factor G a second chance to translocate the tRNAs correctly. Binds to ribosomes in a GTP-dependent manner K03596 - - 1.494e-282 878.0
DYD1_k127_1222992_1 Diguanylate cyclase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009513 503.0
DYD1_k127_1222992_10 Belongs to the peptidase S26 family K03100 - 3.4.21.89 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005694 308.0
DYD1_k127_1222992_11 Plays a role in the regulation of phosphate uptake K02039 GO:0003674,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0008150,GO:0009892,GO:0010563,GO:0010966,GO:0019220,GO:0019222,GO:0031323,GO:0031324,GO:0032879,GO:0034762,GO:0034763,GO:0034765,GO:0034766,GO:0042802,GO:0042803,GO:0043269,GO:0043271,GO:0044070,GO:0044424,GO:0044464,GO:0045936,GO:0046983,GO:0048519,GO:0048523,GO:0050789,GO:0050794,GO:0051049,GO:0051051,GO:0051174,GO:0065007,GO:1903792,GO:1903795,GO:1903796,GO:1903959,GO:1903960,GO:2000185,GO:2000186 - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000001175 298.0
DYD1_k127_1222992_12 Digests double-stranded RNA. Involved in the processing of primary rRNA transcript to yield the immediate precursors to the large and small rRNAs (23S and 16S). Processes some mRNAs, and tRNAs when they are encoded in the rRNA operon. Processes pre- crRNA and tracrRNA of type II CRISPR loci if present in the organism K03685 GO:0000287,GO:0003674,GO:0003676,GO:0003723,GO:0003725,GO:0003824,GO:0004518,GO:0004519,GO:0004521,GO:0004525,GO:0004540,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006139,GO:0006364,GO:0006396,GO:0006397,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0009987,GO:0010467,GO:0016070,GO:0016071,GO:0016072,GO:0016787,GO:0016788,GO:0016891,GO:0016893,GO:0019899,GO:0022613,GO:0032296,GO:0034470,GO:0034641,GO:0034660,GO:0042254,GO:0043167,GO:0043169,GO:0043170,GO:0044085,GO:0044237,GO:0044238,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0046872,GO:0071704,GO:0071840,GO:0090304,GO:0090305,GO:0090501,GO:0090502,GO:0097159,GO:0140098,GO:1901360,GO:1901363 3.1.26.3 0.000000000000000000000000000000000000000000000000000000000000000000001989 242.0
DYD1_k127_1222992_13 PFAM MucB RseB K03598 - - 0.0000000000000000000000000000000000000000000000000000000000000006672 231.0
DYD1_k127_1222992_14 Involved in DNA repair and RecF pathway recombination K03584 - - 0.000000000000000000000000000000000000000000000000000000002385 208.0
DYD1_k127_1222992_15 Transfers the 4'-phosphopantetheine moiety from coenzyme A to a Ser of acyl-carrier-protein K00997 - 2.7.8.7 0.00000000000000000000000000002146 121.0
DYD1_k127_1222992_16 Prokaryotic N-terminal methylation motif K02456 - - 0.00000000000000000000000006383 107.0
DYD1_k127_1222992_17 Anti sigma-E protein RseA, N-terminal domain K03597 - - 0.00000000000000000001884 98.0
DYD1_k127_1222992_18 Domain of unknown function (DUF4845) - - - 0.00000000002301 69.0
DYD1_k127_1222992_2 COG0226 ABC-type phosphate transport system, periplasmic component K02040 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001353 439.0
DYD1_k127_1222992_3 Histidine kinase K07636 - 2.7.13.3 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007093 437.0
DYD1_k127_1222992_4 phosphate transport system permease K02038 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001315 428.0
DYD1_k127_1222992_5 Part of the ABC transporter complex PstSACB involved in phosphate import. Responsible for energy coupling to the transport system - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004576 388.0
DYD1_k127_1222992_6 probably responsible for the translocation of the substrate across the membrane K02037 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002964 389.0
DYD1_k127_1222992_7 Catalyzes the complicated ring closure reaction between the two acyclic compounds 1-deoxy-D-xylulose-5-phosphate (DXP) and 3-amino-2-oxopropyl phosphate (1-amino-acetone-3-phosphate or AAP) to form pyridoxine 5'-phosphate (PNP) and inorganic phosphate K03474 - 2.6.99.2 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003076 334.0
DYD1_k127_1222992_8 An essential GTPase that binds both GDP and GTP, with rapid nucleotide exchange. Plays a role in 16S rRNA processing and 30S ribosomal subunit biogenesis and possibly also in cell cycle regulation and energy metabolism K03595 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005857 325.0
DYD1_k127_1222992_9 phosphate regulon transcriptional regulatory protein PhoB K07657 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004276 305.0
DYD1_k127_1227272_0 Radical SAM superfamily K04069 - 1.97.1.4 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008827 478.0
DYD1_k127_1227272_1 glucose sorbosone - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002164 381.0
DYD1_k127_1227272_2 Belongs to the MEMO1 family K06990 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001407 323.0
DYD1_k127_1227272_3 pfam ammecr1 K09141 - - 0.000000000000000000000000000000000000000000000000000007945 195.0
DYD1_k127_1240913_0 Tripartite ATP-independent periplasmic transporter, DctM component - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002471 519.0
DYD1_k127_1240913_1 Putative diguanylate phosphodiesterase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002438 500.0
DYD1_k127_1240913_2 TRAP transporter T-component - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000009764 282.0
DYD1_k127_1240913_3 Bacterial extracellular solute-binding protein, family 7 - - - 0.00000000000000000000000000000000000000000000000000000000000000000000002452 253.0
DYD1_k127_1240913_4 Catalyzes the reversible phosphatidyl group transfer from one phosphatidylglycerol molecule to another to form cardiolipin (CL) (diphosphatidylglycerol) and glycerol K06131,K06132 - - 0.00000000000000000000000000000000000000000000001493 188.0
DYD1_k127_1240913_5 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase K03320 - - 0.00000000000000000000003533 105.0
DYD1_k127_1242277_0 Peptidase family M28 - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004628 416.0
DYD1_k127_1242277_1 Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released. This sigma factor is the primary sigma factor during exponential growth K03086 - - 0.00000000000000000001176 92.0
DYD1_k127_1249465_0 Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family K03585 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000005009 269.0
DYD1_k127_1249465_1 Tetracycline transcriptional repressor MAATS-type K03577 - - 0.000000000000000000000000000000000000000000000000000003217 198.0
DYD1_k127_1249465_2 YCII-related domain - - - 0.0000000000000000000000000000002704 126.0
DYD1_k127_1249465_3 Protein of unknown function (DUF1428) - - - 0.00008544 47.0
DYD1_k127_125273_0 Oligopeptide/dipeptide transporter, C-terminal region K02031 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002164 507.0
DYD1_k127_125273_1 N-terminal TM domain of oligopeptide transport permease C K02034 - - 0.0000000000000000000000000000000000000000000000000006723 184.0
DYD1_k127_125273_2 Oligopeptide/dipeptide transporter, C-terminal region - - - 0.000000000000000000000000000000000000001148 157.0
DYD1_k127_1257513_0 PFAM ABC transporter K01990 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005919 395.0
DYD1_k127_1257513_1 HlyD family secretion protein K01993 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000005181 282.0
DYD1_k127_1259039_0 Bacterial periplasmic substrate-binding proteins - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004156 328.0
DYD1_k127_1259039_1 Transcriptional regulator, AbiEi antitoxin, Type IV TA system - - - 0.000000000000000000000000000000000000000000000000000000000000000000000001062 258.0
DYD1_k127_1259039_2 GGDEF domain - - - 0.000000000000000000000000000000000000000000000001659 186.0
DYD1_k127_1259039_3 PFAM Plasmid maintenance system killer K07334 - - 0.00000000000000000000000000000000002622 136.0
DYD1_k127_1259039_4 TIGRFAM addiction module antidote protein, HigA family K21498 - - 0.00000000000000000000000000000001085 129.0
DYD1_k127_1260397_0 Polysaccharide biosynthesis protein - - - 2.875e-230 732.0
DYD1_k127_1260397_1 Belongs to the UDP-glucose GDP-mannose dehydrogenase family K00012 - 1.1.1.22 1.48e-213 670.0
DYD1_k127_1260397_10 epimerase dehydratase - - - 0.00000000000000000000000002625 117.0
DYD1_k127_1260397_11 nucleotidyltransferase activity - - - 0.00000000000000000000000002848 111.0
DYD1_k127_1260397_12 Antitoxin component of a toxin-antitoxin (TA) module - - - 0.000000000000000000005088 97.0
DYD1_k127_1260397_13 Putative restriction endonuclease - - - 0.0000000000276 71.0
DYD1_k127_1260397_14 Antitoxin Phd_YefM, type II toxin-antitoxin system - - - 0.000000002488 62.0
DYD1_k127_1260397_15 Toxic component of a toxin-antitoxin (TA) module. An RNase K18828 - - 0.00000001433 58.0
DYD1_k127_1260397_16 Domain of unknown function (DUF4143) K07133 - - 0.00000007043 56.0
DYD1_k127_1260397_17 Post-segregation antitoxin (ccd killing mechanism protein) encoded by the F plasmid K19164 - - 0.00000008617 57.0
DYD1_k127_1260397_18 PIN domain - - - 0.0000001163 55.0
DYD1_k127_1260397_19 Transcriptional regulator - - - 0.0000001454 55.0
DYD1_k127_1260397_2 Catalyzes the transfer of the GlcNAc-1-phosphate moiety from UDP-GlcNAc onto the carrier lipid undecaprenyl phosphate (C55-P), yielding GlcNAc-pyrophosphoryl-undecaprenyl (GlcNAc-PP- C55) K13007 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004446 346.0
DYD1_k127_1260397_3 Catalyzes the synthesis of activated sulfate K00860 - 2.7.1.25 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000174 304.0
DYD1_k127_1260397_4 epimerase dehydratase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000001306 307.0
DYD1_k127_1260397_5 protein conserved in cyanobacteria - - - 0.00000000000000000000000000000000000000000000000000000000000209 216.0
DYD1_k127_1260397_6 Putative restriction endonuclease - - - 0.00000000000000000000000000000000000000000000000000825 186.0
DYD1_k127_1260397_7 protein related to C-terminal domain of eukaryotic chaperone, SACSIN - - - 0.00000000000000000000000000000000000001507 147.0
DYD1_k127_1260397_8 PIN domain - - - 0.00000000000000000000000000000000000008225 148.0
DYD1_k127_1260397_9 Toxic component of a toxin-antitoxin (TA) module. An RNase - - - 0.000000000000000000000000000000003628 133.0
DYD1_k127_1278257_0 Heat shock 70 kDa protein K04043 - - 1.04e-322 997.0
DYD1_k127_1278257_1 ATP binding to DnaK triggers the release of the substrate protein, thus completing the reaction cycle. Several rounds of ATP-dependent interactions between DnaJ, DnaK and GrpE are required for fully efficient folding. Also involved, together with DnaK and GrpE, in the DNA replication of plasmids through activation of initiation proteins K03686 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000008669 270.0
DYD1_k127_1278257_2 Participates actively in the response to hyperosmotic and heat shock by preventing the aggregation of stress-denatured proteins, in association with DnaK and GrpE. It is the nucleotide exchange factor for DnaK and may function as a thermosensor. Unfolded proteins bind initially to DnaJ K03687 - - 0.00000000000000000000000000003866 117.0
DYD1_k127_1308813_0 Protein of unknown function, DUF255 K06888 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005705 541.0
DYD1_k127_1308813_1 C-terminal domain of 1-Cys peroxiredoxin - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007212 378.0
DYD1_k127_1308813_2 Belongs to the pirin family K06911 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001166 325.0
DYD1_k127_1308813_3 SelR domain K07305 - 1.8.4.12 0.00000000000000000000000000000000000000000000000000000000000000001858 230.0
DYD1_k127_1308813_4 Ornithine cyclodeaminase/mu-crystallin family K01750,K19244,K19743 - 1.4.1.1,1.5.1.1,4.3.1.12 0.00000005622 55.0
DYD1_k127_1357283_0 Dynamin family - - - 2.931e-208 666.0
DYD1_k127_1357283_1 Gamma-glutamyltranspeptidase K00681 - 2.3.2.2,3.4.19.13 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004115 617.0
DYD1_k127_1357283_10 signal transduction protein with a C-terminal ATPase domain K08082 - 2.7.13.3 0.0000000000000000000000000000000000000000000000000000000000003381 225.0
DYD1_k127_1357283_11 Uroporphyrinogen-III synthase HemD - - - 0.00000000000000000000000000000000000000000000000000008204 199.0
DYD1_k127_1357283_12 enzyme of heme biosynthesis K02496,K13543 - 2.1.1.107,4.2.1.75 0.000000000000000000000000000000000000000001767 169.0
DYD1_k127_1357283_13 Reversibly transfers an adenylyl group from ATP to 4'- phosphopantetheine, yielding dephospho-CoA (dPCoA) and pyrophosphate K00954 GO:0003674,GO:0003824,GO:0004595,GO:0005488,GO:0005515,GO:0006139,GO:0006163,GO:0006164,GO:0006725,GO:0006732,GO:0006753,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009108,GO:0009117,GO:0009150,GO:0009152,GO:0009165,GO:0009259,GO:0009260,GO:0009987,GO:0015936,GO:0015937,GO:0016740,GO:0016772,GO:0016779,GO:0018130,GO:0019438,GO:0019637,GO:0019693,GO:0033865,GO:0033866,GO:0033875,GO:0034030,GO:0034032,GO:0034033,GO:0034641,GO:0034654,GO:0042802,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0046390,GO:0046483,GO:0051186,GO:0051188,GO:0055086,GO:0070566,GO:0071704,GO:0072521,GO:0072522,GO:0090407,GO:1901135,GO:1901137,GO:1901293,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576 2.7.7.3 0.0000000000000000000000000000000001368 135.0
DYD1_k127_1357283_14 Domain of unknown function (DUF4340) - - - 0.000000000000006723 85.0
DYD1_k127_1357283_2 Oxidoreductase FAD-binding domain K00523 - 1.17.1.1 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000827 464.0
DYD1_k127_1357283_3 ABC-type uncharacterized transport system - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003365 393.0
DYD1_k127_1357283_4 Tetrapolymerization of the monopyrrole PBG into the hydroxymethylbilane pre-uroporphyrinogen in several discrete steps K01749 GO:0003674,GO:0003824,GO:0004418,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006464,GO:0006725,GO:0006778,GO:0006779,GO:0006782,GO:0006783,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009987,GO:0016740,GO:0016765,GO:0018065,GO:0018130,GO:0018160,GO:0018193,GO:0018198,GO:0019438,GO:0019538,GO:0033013,GO:0033014,GO:0034641,GO:0036211,GO:0042168,GO:0042440,GO:0043170,GO:0043412,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044424,GO:0044444,GO:0044464,GO:0046148,GO:0046483,GO:0046501,GO:0051186,GO:0051188,GO:0071704,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576 2.5.1.61 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001501 360.0
DYD1_k127_1357283_5 ABC transporter K01990 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009392 335.0
DYD1_k127_1357283_6 Involved in base excision repair of DNA damaged by oxidation or by mutagenic agents. Acts as DNA glycosylase that recognizes and removes damaged bases. Has a preference for oxidized purines, such as 7,8-dihydro-8-oxoguanine (8-oxoG). Has AP (apurinic apyrimidinic) lyase activity and introduces nicks in the DNA strand. Cleaves the DNA backbone by beta-delta elimination to generate a single-strand break at the site of the removed base with both 3'- and 5'-phosphates K10563 - 3.2.2.23,4.2.99.18 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001383 321.0
DYD1_k127_1357283_7 enzyme of heme biosynthesis K02498 GO:0005575,GO:0005623,GO:0005886,GO:0016020,GO:0044464,GO:0071944 - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000004351 288.0
DYD1_k127_1357283_8 Response regulator of the LytR AlgR family K02477,K08083 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000002348 263.0
DYD1_k127_1357283_9 ABC-type transport system involved in multi-copper enzyme maturation, permease component K01992 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000004684 263.0
DYD1_k127_1437797_0 Belongs to the bacterial solute-binding protein 3 family K09969 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003671 494.0
DYD1_k127_1437797_1 Binding-protein-dependent transport system inner membrane component K09970 GO:0005575,GO:0005623,GO:0005886,GO:0016020,GO:0044464,GO:0071944 - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002188 495.0
DYD1_k127_1437797_10 CoA-transferase family III - - - 0.000000000000000000001181 99.0
DYD1_k127_1437797_2 Belongs to the thiolase family - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001788 484.0
DYD1_k127_1437797_3 L-asparaginase II - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005642 355.0
DYD1_k127_1437797_4 beta-keto acid cleavage enzyme - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001058 323.0
DYD1_k127_1437797_5 of the drug metabolite transporter (DMT) superfamily - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000001328 292.0
DYD1_k127_1437797_6 Acetyltransferase (GNAT) domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000005529 304.0
DYD1_k127_1437797_7 Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000001115 263.0
DYD1_k127_1437797_8 Binding-protein-dependent transport system inner membrane component K02029,K09971,K10002,K10037 GO:0005575,GO:0005623,GO:0005886,GO:0005887,GO:0016020,GO:0016021,GO:0031224,GO:0031226,GO:0044425,GO:0044459,GO:0044464,GO:0071944 - 0.00000000000000000000000000000000000000004068 158.0
DYD1_k127_1437797_9 COG0457 FOG TPR repeat - - - 0.00000000000000000000000000000000000001295 156.0
DYD1_k127_1466627_0 In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity K02335 - 2.7.7.7 0.0 1148.0
DYD1_k127_1466627_1 Catalyzes the first step in hexosamine metabolism, converting fructose-6P into glucosamine-6P using glutamine as a nitrogen source K00820 GO:0003674,GO:0003824,GO:0004360,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006002,GO:0006040,GO:0006047,GO:0006139,GO:0006464,GO:0006486,GO:0006487,GO:0006725,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0008483,GO:0009058,GO:0009059,GO:0009100,GO:0009101,GO:0009225,GO:0009987,GO:0016740,GO:0016769,GO:0019538,GO:0019637,GO:0034641,GO:0034645,GO:0036211,GO:0043170,GO:0043412,GO:0043413,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044281,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0055086,GO:0070085,GO:0070548,GO:0071704,GO:1901135,GO:1901137,GO:1901360,GO:1901564,GO:1901566,GO:1901576 2.6.1.16 8.806e-306 947.0
DYD1_k127_1466627_10 cation diffusion facilitator family transporter K16264 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005847 361.0
DYD1_k127_1466627_11 Belongs to the short-chain dehydrogenases reductases (SDR) family - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001927 347.0
DYD1_k127_1466627_12 A domain family that is part of the cupin metalloenzyme superfamily. K18850 - 1.14.11.47 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000008915 301.0
DYD1_k127_1466627_13 ubiE/COQ5 methyltransferase family - - - 0.00000000000000000000000000000000000000000000000000000000000000004966 231.0
DYD1_k127_1466627_14 SNARE associated Golgi protein - - - 0.00000000000000000000000000000000000000000000000000000000001247 215.0
DYD1_k127_1466627_15 PFAM cytochrome c - - - 0.00000000000000000000000000000000000000000000000000000004027 202.0
DYD1_k127_1466627_16 Condenses 4-methyl-5-(beta-hydroxyethyl)thiazole monophosphate (THZ-P) and 2-methyl-4-amino-5-hydroxymethyl pyrimidine pyrophosphate (HMP-PP) to form thiamine monophosphate (TMP) K00788 - 2.5.1.3 0.0000000000000000000000000000000000000000000000000000001577 206.0
DYD1_k127_1466627_17 Necessary for normal cell division and for the maintenance of normal septation K03978 - - 0.000000000000000000000000000000000000000000000000000003349 198.0
DYD1_k127_1466627_18 Cupin 2, conserved barrel domain protein - - - 0.00000000000000000000000000000000000000000000000000001221 190.0
DYD1_k127_1466627_19 diguanylate cyclase - - - 0.0000000000000000000000000000000000000006372 158.0
DYD1_k127_1466627_2 PFAM UvrD REP helicase K03657 - 3.6.4.12 4.936e-292 925.0
DYD1_k127_1466627_20 Tetratricopeptide repeat - - - 0.00000000000000000000000000000000003568 139.0
DYD1_k127_1466627_21 nuclease - - - 0.00000000000000000000000000000033 132.0
DYD1_k127_1466627_22 - - - - 0.0000000000000000000000000000006143 128.0
DYD1_k127_1466627_23 rubredoxin - - - 0.00000000000000000000001596 102.0
DYD1_k127_1466627_24 Produces ATP from ADP in the presence of a proton gradient across the membrane K02114 - - 0.0000000000000000000005473 96.0
DYD1_k127_1466627_26 50S ribosomal protein L31 K02909 - - 0.00000000000000000114 85.0
DYD1_k127_1466627_27 Protein of unknown function (DUF2782) - - - 0.00000000000000002149 89.0
DYD1_k127_1466627_28 Transposase DDE domain - - - 0.0000000000001765 71.0
DYD1_k127_1466627_29 Toxic component of a toxin-antitoxin (TA) module. An RNase K07065 GO:0003674,GO:0003824,GO:0004518,GO:0004519,GO:0004521,GO:0004540,GO:0006139,GO:0006401,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0009056,GO:0009057,GO:0009987,GO:0016070,GO:0016072,GO:0016075,GO:0016787,GO:0016788,GO:0019439,GO:0034641,GO:0034655,GO:0034660,GO:0034661,GO:0040008,GO:0043170,GO:0044237,GO:0044238,GO:0044248,GO:0044260,GO:0044265,GO:0044270,GO:0045926,GO:0046483,GO:0046700,GO:0048519,GO:0050789,GO:0065007,GO:0071704,GO:0090304,GO:0090305,GO:0090501,GO:0090502,GO:0140098,GO:1901360,GO:1901361,GO:1901575 - 0.0000000003885 65.0
DYD1_k127_1466627_3 Bifunctional transglycosylase second domain K05365 - 2.4.1.129,3.4.16.4 2.195e-275 863.0
DYD1_k127_1466627_30 Cell wall formation. Synthesis of cross-linked peptidoglycan from the lipid intermediates. The enzyme has a penicillin-insensitive transglycosylase N-terminal domain (formation of linear glycan strands) and a penicillin-sensitive transpeptidase C-terminal domain (cross-linking of the peptide subunits) K05365,K05366 - 2.4.1.129,3.4.16.4 0.000000001723 62.0
DYD1_k127_1466627_4 PFAM 3-hydroxyacyl-CoA dehydrogenase K01782 - 1.1.1.35,4.2.1.17,5.1.2.3 1.283e-203 664.0
DYD1_k127_1466627_5 Aminotransferase K01845 GO:0003674,GO:0003824,GO:0005488,GO:0005515,GO:0006725,GO:0006778,GO:0006779,GO:0006782,GO:0006783,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009987,GO:0016853,GO:0016866,GO:0016869,GO:0018130,GO:0019438,GO:0033013,GO:0033014,GO:0034641,GO:0042168,GO:0042286,GO:0042440,GO:0042802,GO:0044237,GO:0044249,GO:0044271,GO:0046148,GO:0046483,GO:0046501,GO:0051186,GO:0051188,GO:0071704,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576 5.4.3.8 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005197 588.0
DYD1_k127_1466627_6 Catalyzes the last two sequential reactions in the de novo biosynthetic pathway for UDP-N-acetylglucosamine (UDP- GlcNAc). The C-terminal domain catalyzes the transfer of acetyl group from acetyl coenzyme A to glucosamine-1-phosphate (GlcN-1-P) to produce N-acetylglucosamine-1-phosphate (GlcNAc-1-P), which is converted into UDP-GlcNAc by the transfer of uridine 5- monophosphate (from uridine 5-triphosphate), a reaction catalyzed by the N-terminal domain K04042 - 2.3.1.157,2.7.7.23 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004962 544.0
DYD1_k127_1466627_7 Belongs to the thiolase family K00626 - 2.3.1.9 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000145 494.0
DYD1_k127_1466627_8 Zn-dependent protease - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002906 468.0
DYD1_k127_1466627_9 Including yeast histone deacetylase and acetoin utilization protein K04768 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001652 432.0
DYD1_k127_1473702_0 Protein of unknown function (DUF3179) - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002014 404.0
DYD1_k127_1473702_1 Converts heme B (protoheme IX) to heme O by substitution of the vinyl group on carbon 2 of heme B porphyrin ring with a hydroxyethyl farnesyl side group K02257 - 2.5.1.141 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004514 357.0
DYD1_k127_1473702_10 Reversibly transfers an adenylyl group from ATP to 4'- phosphopantetheine, yielding dephospho-CoA (dPCoA) and pyrophosphate K00954 GO:0003674,GO:0003824,GO:0004595,GO:0005488,GO:0005515,GO:0006139,GO:0006163,GO:0006164,GO:0006725,GO:0006732,GO:0006753,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009108,GO:0009117,GO:0009150,GO:0009152,GO:0009165,GO:0009259,GO:0009260,GO:0009987,GO:0015936,GO:0015937,GO:0016740,GO:0016772,GO:0016779,GO:0018130,GO:0019438,GO:0019637,GO:0019693,GO:0033865,GO:0033866,GO:0033875,GO:0034030,GO:0034032,GO:0034033,GO:0034641,GO:0034654,GO:0042802,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0046390,GO:0046483,GO:0051186,GO:0051188,GO:0055086,GO:0070566,GO:0071704,GO:0072521,GO:0072522,GO:0090407,GO:1901135,GO:1901137,GO:1901293,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576 2.7.7.3 0.000000004605 60.0
DYD1_k127_1473702_2 SRP54-type protein, helical bundle domain K03110 GO:0000166,GO:0001882,GO:0001883,GO:0003674,GO:0003824,GO:0003924,GO:0005488,GO:0005525,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005886,GO:0006605,GO:0006612,GO:0006613,GO:0006614,GO:0006810,GO:0006886,GO:0008104,GO:0008150,GO:0015031,GO:0015833,GO:0016020,GO:0016462,GO:0016787,GO:0016817,GO:0016818,GO:0017076,GO:0017111,GO:0019001,GO:0019897,GO:0019898,GO:0031224,GO:0031226,GO:0032549,GO:0032550,GO:0032553,GO:0032555,GO:0032561,GO:0033036,GO:0033365,GO:0034613,GO:0035639,GO:0036094,GO:0042886,GO:0043167,GO:0043168,GO:0044424,GO:0044425,GO:0044444,GO:0044459,GO:0044464,GO:0045047,GO:0045184,GO:0046907,GO:0051179,GO:0051234,GO:0051641,GO:0051649,GO:0070727,GO:0070972,GO:0071702,GO:0071705,GO:0071944,GO:0072594,GO:0072599,GO:0072657,GO:0090150,GO:0097159,GO:0097367,GO:1901265,GO:1901363 - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003497 348.0
DYD1_k127_1473702_3 Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released. This sigma factor is involved in regulation of expression of heat shock genes K03089 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004034 319.0
DYD1_k127_1473702_4 TIGRFAM Cell division ATP-binding protein FtsE K09812 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001917 309.0
DYD1_k127_1473702_5 Serine aminopeptidase, S33 K06889 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003441 308.0
DYD1_k127_1473702_6 Part of the ABC transporter FtsEX involved in cellular division K09811 GO:0005575,GO:0005618,GO:0005623,GO:0005886,GO:0008150,GO:0009274,GO:0009276,GO:0009987,GO:0016020,GO:0016021,GO:0030312,GO:0030313,GO:0031224,GO:0031975,GO:0032153,GO:0044425,GO:0044464,GO:0051301,GO:0071944 - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000205 286.0
DYD1_k127_1473702_7 Specifically methylates the guanine in position 966 of 16S rRNA in the assembled 30S particle K08316 - 2.1.1.171 0.000000000000000000000000000000000000000000000000000009223 195.0
DYD1_k127_1473702_8 cytochrome oxidase assembly K02259 - - 0.00000000000000000000000000000000000008281 154.0
DYD1_k127_1473702_9 - - - - 0.000000000000000000000000000006443 123.0
DYD1_k127_1490098_0 FAD linked oxidase - - - 2.511e-231 723.0
DYD1_k127_1490098_1 GAF domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002481 535.0
DYD1_k127_1490098_10 - - - - 0.0000000000000617 78.0
DYD1_k127_1490098_2 epimerase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001209 493.0
DYD1_k127_1490098_3 ABC transporter K02049,K10831 GO:0003674,GO:0003824,GO:0005215,GO:0005342,GO:0005368,GO:0006810,GO:0006811,GO:0006820,GO:0006855,GO:0008150,GO:0008509,GO:0008514,GO:0008559,GO:0015075,GO:0015238,GO:0015399,GO:0015405,GO:0015411,GO:0015711,GO:0015734,GO:0015849,GO:0015893,GO:0016462,GO:0016787,GO:0016817,GO:0016818,GO:0016887,GO:0017111,GO:0022804,GO:0022857,GO:0033283,GO:0034220,GO:0042221,GO:0042493,GO:0042623,GO:0042626,GO:0042908,GO:0042910,GO:0043492,GO:0050896,GO:0051179,GO:0051234,GO:0055085,GO:0071702,GO:0071705,GO:0072348,GO:0098656,GO:1901682,GO:1903825 3.6.3.36 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003381 351.0
DYD1_k127_1490098_4 Binding-protein-dependent transport system inner membrane component K02050,K15554 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000002771 302.0
DYD1_k127_1490098_5 NMT1-like family K15553 - - 0.000000000000000000000000000000000000000000000000000000000000000000005196 249.0
DYD1_k127_1490098_6 HxlR-like helix-turn-helix - - - 0.00000000000000000000000000000000000000003887 158.0
DYD1_k127_1490098_7 - - - - 0.000000000000000000000000000006685 128.0
DYD1_k127_1490098_9 - - - - 0.000000000000004839 84.0
DYD1_k127_1505996_0 UDP binding domain K02474 - - 7.816e-201 634.0
DYD1_k127_1505996_1 PFAM tRNA synthetase class II (G H P and S) K01892 - 6.1.1.21 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002354 512.0
DYD1_k127_1505996_10 Regulates the transcription of several operons and genes involved in the biogenesis of Fe-S clusters and Fe-S-containing proteins K13643 GO:0003674,GO:0003700,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006355,GO:0008150,GO:0009889,GO:0010468,GO:0010556,GO:0019219,GO:0019222,GO:0031323,GO:0031326,GO:0042802,GO:0044424,GO:0044444,GO:0044464,GO:0050789,GO:0050794,GO:0051171,GO:0051252,GO:0060255,GO:0065007,GO:0080090,GO:0140110,GO:1903506,GO:2000112,GO:2001141 - 0.000000000000000000000000000000000000000000000000000000001061 204.0
DYD1_k127_1505996_11 Ferredoxins are iron-sulfur proteins that transfer electrons in a wide variety of metabolic reactions K05524 - - 0.000000000000000000000000000000000000000000000000001135 186.0
DYD1_k127_1505996_12 Type IV pilus biogenesis stability protein PilW K02656 - - 0.000000000000000000000000000000000000000000003462 173.0
DYD1_k127_1505996_13 Belongs to the HesB IscA family K13628 - - 0.0000000000000000000000000000000000000001807 153.0
DYD1_k127_1505996_14 Tetratricopeptide repeat-like domain - - - 0.000000000000000000000000000000000155 141.0
DYD1_k127_1505996_15 Domain of unknown function (DUF4115) K15539 - - 0.0000000000000000000000000001321 126.0
DYD1_k127_1505996_16 Carboxylesterase family - - - 0.000000006102 66.0
DYD1_k127_1505996_17 serine threonine protein kinase K08282 - 2.7.11.1 0.0009222 42.0
DYD1_k127_1505996_2 Specifically methylates position 2 of adenine 2503 in 23S rRNA and position 2 of adenine 37 in tRNAs K06941 - 2.1.1.192 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007009 499.0
DYD1_k127_1505996_3 GTPase that plays an essential role in the late steps of ribosome biogenesis K03977 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007341 468.0
DYD1_k127_1505996_4 Inositol monophosphatase K01092 - 3.1.3.25 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004598 330.0
DYD1_k127_1505996_5 Part of the outer membrane protein assembly complex, which is involved in assembly and insertion of beta-barrel proteins into the outer membrane K17713 GO:0003674,GO:0003824,GO:0005488,GO:0005515,GO:0005575,GO:0005623,GO:0008104,GO:0008150,GO:0008152,GO:0009279,GO:0009987,GO:0016020,GO:0016043,GO:0016491,GO:0019867,GO:0022607,GO:0030312,GO:0030313,GO:0031224,GO:0031230,GO:0031241,GO:0031246,GO:0031975,GO:0032991,GO:0033036,GO:0034613,GO:0042802,GO:0043163,GO:0043165,GO:0044085,GO:0044091,GO:0044425,GO:0044462,GO:0044464,GO:0045184,GO:0045229,GO:0051179,GO:0051205,GO:0051234,GO:0051641,GO:0055114,GO:0061024,GO:0070727,GO:0071709,GO:0071840,GO:0071944,GO:0072657,GO:0090150,GO:0098552,GO:0098796,GO:1990063 - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003084 314.0
DYD1_k127_1505996_6 double-strand break repair protein AddB K16899 - 3.6.4.12 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001267 324.0
DYD1_k127_1505996_7 - - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000003454 278.0
DYD1_k127_1505996_8 Catalyzes the formation of 2'O-methylated cytidine (Cm32) or 2'O-methylated uridine (Um32) at position 32 in tRNA K02533,K15396 - 2.1.1.200 0.00000000000000000000000000000000000000000000000000000000000000003801 231.0
DYD1_k127_1505996_9 Major role in the synthesis of nucleoside triphosphates other than ATP. The ATP gamma phosphate is transferred to the NDP beta phosphate via a ping-pong mechanism, using a phosphorylated active-site intermediate K00940 - 2.7.4.6 0.00000000000000000000000000000000000000000000000000000000000003043 217.0
DYD1_k127_1506683_0 D-xylulose 5-phosphate D-fructose 6-phosphate phosphoketolase K01621 - 4.1.2.22,4.1.2.9 0.0 1387.0
DYD1_k127_1506683_1 Ribosomal protein L11 methyltransferase (PrmA) K05929 - 2.1.1.103 0.0000000000000000000000000000000000000000000000000000000000000000000000004211 255.0
DYD1_k127_1506683_2 heavy metal translocating P-type ATPase K01533 - 3.6.3.4 0.00000000000000000000000000000000000000000000000000000901 203.0
DYD1_k127_1506683_3 TIGRFAM 40-residue YVTN family beta-propeller repeat protein - - - 0.000000000000000000000000001035 112.0
DYD1_k127_1506683_4 Haloacid dehalogenase-like hydrolase - - - 0.00000000000000000001124 94.0
DYD1_k127_1506683_5 TIGRFAM HAD-superfamily hydrolase, subfamily IA, variant 3 - - - 0.000000000000001313 83.0
DYD1_k127_1507077_0 KR domain K00019 - 1.1.1.30 0.0000000000000000000000000000000000000000000000000000000007728 205.0
DYD1_k127_1507077_1 TRAP transporter, solute receptor (TAXI family K07080 - - 0.00000000000000000000000000000001382 144.0
DYD1_k127_1507077_2 TIGRFAM TRAP transporter, 4TM 12TM fusion protein - - - 0.0000000000000000005197 94.0
DYD1_k127_1540371_0 Domain of unknown function (DUF4118) - - - 0.0000000000000000000000000000000000000000000000000000000000000001074 245.0
DYD1_k127_1540371_1 cyclic nucleotide-binding - - - 0.000000000000000000000000000000000000000000000000000000002368 213.0
DYD1_k127_1558423_0 Vitamin B12 dependent methionine synthase activation K00548 - 2.1.1.13 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000461 531.0
DYD1_k127_1558423_1 Catalyzes the anti-1,4-elimination of the C-3 phosphate and the C-6 proR hydrogen from 5-enolpyruvylshikimate-3-phosphate (EPSP) to yield chorismate, which is the branch point compound that serves as the starting substrate for the three terminal pathways of aromatic amino acid biosynthesis. This reaction introduces a second double bond into the aromatic ring system K01736 GO:0000166,GO:0003674,GO:0003824,GO:0004107,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006082,GO:0006520,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0008652,GO:0009058,GO:0009072,GO:0009073,GO:0009423,GO:0009987,GO:0010181,GO:0016053,GO:0016829,GO:0016835,GO:0016838,GO:0019438,GO:0019752,GO:0032553,GO:0036094,GO:0042802,GO:0043167,GO:0043168,GO:0043436,GO:0043648,GO:0043650,GO:0044237,GO:0044238,GO:0044249,GO:0044281,GO:0044283,GO:0044424,GO:0044444,GO:0044464,GO:0046394,GO:0046417,GO:0048037,GO:0050662,GO:0071704,GO:0097159,GO:0097367,GO:1901265,GO:1901360,GO:1901362,GO:1901363,GO:1901564,GO:1901566,GO:1901576 4.2.3.5 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006526 383.0
DYD1_k127_1558423_2 Protein conserved in bacteria - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000632 377.0
DYD1_k127_1558423_3 Belongs to the D-alanine--D-alanine ligase family K01921,K01955 - 6.3.2.4,6.3.5.5 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000515 362.0
DYD1_k127_1558423_4 TraB family K09973 - - 0.00000000000000000000000000000000000000000000000002275 192.0
DYD1_k127_1572297_0 Allows the formation of correctly charged Asn-tRNA(Asn) or Gln-tRNA(Gln) through the transamidation of misacylated Asp- tRNA(Asn) or Glu-tRNA(Gln) in organisms which lack either or both of asparaginyl-tRNA or glutaminyl-tRNA synthetases. The reaction takes place in the presence of glutamine and ATP through an activated phospho-Asp-tRNA(Asn) or phospho-Glu-tRNA(Gln) K02434 - 6.3.5.6,6.3.5.7 3.926e-201 632.0
DYD1_k127_1572297_1 COG0471 Di- and tricarboxylate transporters - - - 1.776e-200 640.0
DYD1_k127_1572297_2 Patatin-like phospholipase K07001 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008339 422.0
DYD1_k127_1572297_3 Protein of unknown function (DUF489) K07153 - - 0.000000000000000000000000000000000000002107 154.0
DYD1_k127_1572297_4 Protein of unknown function (DUF2905) - - - 0.000000000000000000001845 102.0
DYD1_k127_1572297_5 - - - - 0.00000000000000002696 93.0
DYD1_k127_1572297_7 PFAM Uracil-DNA glycosylase superfamily K10800 - - 0.00005644 45.0
DYD1_k127_1573403_0 Heat shock 70 kDa protein K04043 - - 2.58e-281 873.0
DYD1_k127_1573403_1 ATP binding to DnaK triggers the release of the substrate protein, thus completing the reaction cycle. Several rounds of ATP-dependent interactions between DnaJ, DnaK and GrpE are required for fully efficient folding. Also involved, together with DnaK and GrpE, in the DNA replication of plasmids through activation of initiation proteins K03686 GO:0006457,GO:0008150,GO:0009987 - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004584 512.0
DYD1_k127_1573403_2 Catalyzes the conversion of 4-hydroxy- tetrahydrodipicolinate (HTPA) to tetrahydrodipicolinate K00215 - 1.17.1.8 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002038 313.0
DYD1_k127_1573403_3 carbamoyl-phosphate synthetase glutamine chain K01956 - 6.3.5.5 0.0000000000000000000000000000000000000000000000000000000000003624 215.0
DYD1_k127_1581378_0 The UvrABC repair system catalyzes the recognition and processing of DNA lesions. UvrC both incises the 5' and 3' sides of the lesion. The N-terminal half is responsible for the 3' incision and the C-terminal half is responsible for the 5' incision K03703 - - 1.047e-218 694.0
DYD1_k127_1581378_1 Belongs to the CDP-alcohol phosphatidyltransferase class-I family K00995,K08744 - 2.7.8.41,2.7.8.5 0.00000000000000000000000000000000000000000000009403 177.0
DYD1_k127_1581378_2 Involved in peptide bond synthesis. Stimulates efficient translation and peptide-bond synthesis on native or reconstituted 70S ribosomes in vitro. Probably functions indirectly by altering the affinity of the ribosome for aminoacyl-tRNA, thus increasing their reactivity as acceptors for peptidyl transferase K02356 - - 0.00000000000000000000000000000001957 130.0
DYD1_k127_1614458_0 Electron transfer flavoprotein-ubiquinone oxidoreductase K00311 - 1.5.5.1 3.068e-233 726.0
DYD1_k127_1614458_1 COG1902 NADH flavin oxidoreductases, Old Yellow Enzyme family - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006567 454.0
DYD1_k127_1614458_2 COG0534 Na -driven multidrug efflux pump - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004124 441.0
DYD1_k127_1614458_3 Belongs to the enoyl-CoA hydratase isomerase family K01692 - 4.2.1.17 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001012 394.0
DYD1_k127_1614458_4 Pfam:UPF0118 - - - 0.000000000000000000000000000000000000000000000000000000002259 204.0
DYD1_k127_1614458_5 - - - - 0.000000000000000000000000000000000000000000003583 168.0
DYD1_k127_1614458_6 ribosome binding - - - 0.00002308 50.0
DYD1_k127_1632583_0 Catalyzes the condensation of the acetyl group of acetyl-CoA with 3-methyl-2-oxobutanoate (2-oxoisovalerate) to form 3-carboxy-3-hydroxy-4-methylpentanoate (2-isopropylmalate) K01649 - 2.3.3.13 6.666e-249 776.0
DYD1_k127_1632583_1 amino acids such as threonine, to avoid such errors, it has a posttransfer editing activity that hydrolyzes mischarged Thr-tRNA(Val) in a tRNA-dependent manner K01873 - 6.1.1.9 6.724e-246 770.0
DYD1_k127_1632583_2 TIGRFAM Phage SPO1 DNA polymerase-related protein K21929 - 3.2.2.27 0.000000000000000000000000000000000000000000000000000000000000000000000000000000005827 278.0
DYD1_k127_1632583_3 Ribosomal-protein-alanine acetyltransferase K03789 - 2.3.1.128 0.000000000000000000000000000000000000000000000001088 181.0
DYD1_k127_1632583_4 Belongs to the CDP-alcohol phosphatidyltransferase class-I family K17103 - 2.7.8.8 0.000000000000000000002013 96.0
DYD1_k127_1663438_0 Transposase DDE domain - - - 3.607e-264 824.0
DYD1_k127_1663438_1 Belongs to the sulfur carrier protein TusA family - - - 0.000000000000001066 78.0
DYD1_k127_171456_0 Catalyzes the conversion of acetate into acetyl-CoA (AcCoA), an essential intermediate at the junction of anabolic and catabolic pathways. AcsA undergoes a two-step reaction. In the first half reaction, AcsA combines acetate with ATP to form acetyl-adenylate (AcAMP) intermediate. In the second half reaction, it can then transfer the acetyl group from AcAMP to the sulfhydryl group of CoA, forming the product AcCoA K01895 - 6.2.1.1 0.0 1017.0
DYD1_k127_171456_1 Sulfatase-modifying factor enzyme 1 - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002726 437.0
DYD1_k127_171456_2 - - - - 0.000000000000000000000000000003371 123.0
DYD1_k127_1798431_0 COG4664 TRAP-type mannitol chloroaromatic compound transport system, large permease component - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001068 508.0
DYD1_k127_1798431_1 Part of the tripartite ATP-independent periplasmic (TRAP) transport system - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002294 458.0
DYD1_k127_1798431_2 Amidase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001137 315.0
DYD1_k127_1798431_3 TRAP-type mannitol chloroaromatic compound transport system, small permease component - - - 0.0000000000000000000000000000000000000000000000000000000000000000000006849 244.0
DYD1_k127_1798431_4 D-isomer specific 2-hydroxyacid dehydrogenase K03778,K18916 - 1.1.1.28,1.20.1.1 0.00000000000000000000000000000000000000009008 151.0
DYD1_k127_1808211_0 PFAM AMP-binding enzyme - - - 1.963e-292 921.0
DYD1_k127_1808211_1 Coenzyme F390 synthetase K01912 - 6.2.1.30 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002257 574.0
DYD1_k127_1808211_10 B12 binding domain K01849 GO:0003674,GO:0003824,GO:0005488,GO:0006139,GO:0006163,GO:0006637,GO:0006725,GO:0006732,GO:0006753,GO:0006790,GO:0006793,GO:0006796,GO:0006807,GO:0008144,GO:0008150,GO:0008152,GO:0009117,GO:0009150,GO:0009259,GO:0009987,GO:0016853,GO:0016866,GO:0019637,GO:0019693,GO:0019842,GO:0031419,GO:0033865,GO:0033875,GO:0034032,GO:0034641,GO:0034784,GO:0035383,GO:0036094,GO:0043603,GO:0044237,GO:0044238,GO:0044281,GO:0046483,GO:0046906,GO:0048037,GO:0051186,GO:0055086,GO:0071704,GO:0072521,GO:0097159,GO:1901135,GO:1901360,GO:1901363,GO:1901564 5.4.99.2 0.000000000000000000000000000000000000000000000000002631 190.0
DYD1_k127_1808211_11 transcriptional regulator - - - 0.00000000000000000000000000000000000000000001115 169.0
DYD1_k127_1808211_2 Periplasmic binding protein K01999 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008802 535.0
DYD1_k127_1808211_3 Belongs to the binding-protein-dependent transport system permease family - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002857 488.0
DYD1_k127_1808211_4 Cys/Met metabolism PLP-dependent enzyme K01740 - 2.5.1.49 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001813 479.0
DYD1_k127_1808211_5 Methylmalonyl-CoA mutase K01848 GO:0003674,GO:0003824,GO:0006139,GO:0006163,GO:0006637,GO:0006725,GO:0006732,GO:0006753,GO:0006790,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0009117,GO:0009150,GO:0009259,GO:0009987,GO:0016853,GO:0016866,GO:0019637,GO:0019693,GO:0033865,GO:0033875,GO:0034032,GO:0034641,GO:0034784,GO:0035383,GO:0043603,GO:0044237,GO:0044238,GO:0044281,GO:0046483,GO:0051186,GO:0055086,GO:0071704,GO:0072521,GO:1901135,GO:1901360,GO:1901564 5.4.99.2 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003483 481.0
DYD1_k127_1808211_6 Belongs to the binding-protein-dependent transport system permease family K01997 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000372 463.0
DYD1_k127_1808211_7 ATPases associated with a variety of cellular activities K01996 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004901 433.0
DYD1_k127_1808211_8 Branched-chain amino acid ATP-binding cassette transporter K01995,K01998 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001655 427.0
DYD1_k127_1808211_9 CoA-binding protein K06929 - - 0.0000000000000000000000000000000000000000000000000000000000000001571 224.0
DYD1_k127_1809280_0 PFAM FAD-dependent pyridine nucleotide-disulphide oxidoreductase - - - 8.119e-320 988.0
DYD1_k127_1809280_1 4Fe-4S dicluster domain - - - 8.778e-268 832.0
DYD1_k127_1809280_10 - - - - 0.000000000000000000000000002218 115.0
DYD1_k127_1809280_2 Nitrate reductase gamma subunit - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002002 362.0
DYD1_k127_1809280_3 PFAM 4Fe-4S ferredoxin, iron-sulfur binding domain protein K00184 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009183 313.0
DYD1_k127_1809280_4 PFAM Polysulphide reductase, NrfD K00185 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002268 309.0
DYD1_k127_1809280_5 TIGRFAM sulfur relay protein TusD DsrE K07235 GO:0006790,GO:0008150,GO:0008152,GO:0009987,GO:0019417,GO:0044237,GO:0055114 - 0.0000000000000000000000000000000000000000000000000000000000000000001526 231.0
DYD1_k127_1809280_6 part of a sulfur-relay system K11179 - - 0.0000000000000000000000000000000000000000000000000000000003239 203.0
DYD1_k127_1809280_7 Belongs to the DsrF TusC family K07236 - - 0.0000000000000000000000000000000000000000000000000131 188.0
DYD1_k127_1809280_8 sulfur relay protein TusB DsrH K07237 - - 0.000000000000000000000000000000001848 131.0
DYD1_k127_1809280_9 reductase, dissimilatory-type beta subunit K11181 - 1.8.99.5 0.000000000000000000000000000003703 119.0
DYD1_k127_1811406_0 Catalyzes the NADP-dependent rearrangement and reduction of 1-deoxy-D-xylulose-5-phosphate (DXP) to 2-C-methyl-D-erythritol 4-phosphate (MEP) K00099 - 1.1.1.267 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003461 479.0
DYD1_k127_1811406_1 Belongs to the CDS family K00981 - 2.7.7.41 0.00000000000000000000000000000000000000000000004521 182.0
DYD1_k127_1811406_2 zinc metalloprotease K11749 - - 0.0000000000000000000000159 102.0
DYD1_k127_1811406_3 Catalyzes the condensation of isopentenyl diphosphate (IPP) with allylic pyrophosphates generating different type of terpenoids K00806 - 2.5.1.31 0.0000000000000000000001058 98.0
DYD1_k127_1815289_0 PFAM Polysulphide reductase, NrfD K00185 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001645 523.0
DYD1_k127_1815289_1 PFAM 4Fe-4S ferredoxin iron-sulfur binding domain protein K00184 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002638 339.0
DYD1_k127_1815289_2 - - - - 0.00000000000000000000000000344 117.0
DYD1_k127_1815289_3 PFAM FAD-dependent pyridine nucleotide-disulphide oxidoreductase - - - 0.0000000000000000000002955 95.0
DYD1_k127_1815289_4 CobB/CobQ-like glutamine amidotransferase domain K02224 - 6.3.5.11,6.3.5.9 0.000000000000000000006486 95.0
DYD1_k127_1820336_0 TRAP C4-dicarboxylate transport system permease DctM subunit K11690 - - 0.0000000000000000000000000000000000000000000000000000000000000000000001128 256.0
DYD1_k127_1820336_1 Domain of unknown function (DUF4396) - - - 0.0000000000000000000000000000000000000000000000000000000005136 206.0
DYD1_k127_1820336_2 Polyketide cyclase / dehydrase and lipid transport - - - 0.000000000000000000000001055 113.0
DYD1_k127_1820336_3 Belongs to the UPF0312 family - - - 0.00000000000000000000000936 111.0
DYD1_k127_1822437_0 PFAM malic K00027,K00029 - 1.1.1.38,1.1.1.40 7.949e-204 645.0
DYD1_k127_1822437_1 PIN domain - - - 0.00000000003951 64.0
DYD1_k127_1823647_0 VWA domain containing CoxE-like protein K07161 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006903 520.0
DYD1_k127_1823647_1 AAA domain (dynein-related subfamily) - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005899 447.0
DYD1_k127_1823647_10 - - - - 0.000000000001691 76.0
DYD1_k127_1823647_11 - - - - 0.000000003364 65.0
DYD1_k127_1823647_2 Alpha/beta hydrolase family K01055 - 3.1.1.24 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007279 372.0
DYD1_k127_1823647_3 CO dehydrogenase flavoprotein C-terminal domain K03519 - 1.2.5.3 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004352 314.0
DYD1_k127_1823647_4 XdhC Rossmann domain K07402 - - 0.00000000000000000000000000000000000000000000000000000000000000000000076 243.0
DYD1_k127_1823647_5 Probable molybdopterin binding domain K07141 - 2.7.7.76 0.00000000000000000000000000000000000000000000000000001806 197.0
DYD1_k127_1823647_6 transcriptional - - - 0.000000000000000000000000000000000000000000000008724 173.0
DYD1_k127_1823647_7 periplasmic protein kinase ArgK and related GTPases of G3E family K07588 - - 0.0000000000000000000000000000000000001889 144.0
DYD1_k127_1823647_8 Polyketide cyclase / dehydrase and lipid transport K16260 - - 0.00000000000000000000000000000001405 132.0
DYD1_k127_1823647_9 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily - - - 0.00000000000000000000000000006384 124.0
DYD1_k127_1826548_0 DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates K03043 - 2.7.7.6 0.0 1718.0
DYD1_k127_1826548_1 DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates K03046 GO:0000428,GO:0005575,GO:0005622,GO:0005623,GO:0030880,GO:0032991,GO:0044424,GO:0044464,GO:0061695,GO:1902494,GO:1990234 2.7.7.6 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001492 352.0
DYD1_k127_1850916_0 Belongs to the IlvD Edd family K01687 GO:0003674,GO:0003824,GO:0004160,GO:0016829,GO:0016835,GO:0016836 4.2.1.9 2.229e-277 863.0
DYD1_k127_1850916_1 pyrroloquinoline quinone binding - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000112 453.0
DYD1_k127_1850916_10 COG0500 SAM-dependent methyltransferases - - - 0.0000000000008019 68.0
DYD1_k127_1850916_11 Uncharacterized protein conserved in bacteria (DUF2236) - - - 0.0000000006466 70.0
DYD1_k127_1850916_2 Gaf domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003399 433.0
DYD1_k127_1850916_3 PFAM oxidoreductase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004943 371.0
DYD1_k127_1850916_4 Dihydroorotate dehydrogenase K00254 - 1.3.5.2 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001226 362.0
DYD1_k127_1850916_5 S4 RNA-binding domain K06182 - 5.4.99.21 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001106 328.0
DYD1_k127_1850916_6 Beta-lactamase superfamily domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000001181 290.0
DYD1_k127_1850916_7 Uncharacterized protein conserved in bacteria (DUF2236) - - - 0.00000000000000000000000000000000000000000000000000000000000000000000656 246.0
DYD1_k127_1850916_8 Protein of unknown function (DUF1015) - - - 0.0000000000000000000000000000000000000000000003099 169.0
DYD1_k127_1850916_9 PFAM Iron sulphur-containing domain, CDGSH-type - - - 0.0000000000000005346 81.0
DYD1_k127_1867850_0 Homeodomain-like domain K07497 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001298 395.0
DYD1_k127_1875589_0 PFAM AMP-dependent synthetase and ligase K01908 - 6.2.1.17 0.0 1013.0
DYD1_k127_1875589_1 2-methylcitrate dehydratase K01720 - 4.2.1.79 2.026e-232 726.0
DYD1_k127_1875589_10 Haloacid dehalogenase-like hydrolase K01560 - 3.8.1.2 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000001048 297.0
DYD1_k127_1875589_11 homoserine transmembrane transporter activity - - - 0.0000000000000000000000000000000000000000000000000000000000000851 219.0
DYD1_k127_1875589_12 Copper/zinc superoxide dismutase (SODC) K04565 - 1.15.1.1 0.00000000000000000000000000000000000000000000000000000000001738 211.0
DYD1_k127_1875589_13 THIoesterase K18700 - 3.1.2.29 0.000000000000000000000000000000000000000000000000001225 187.0
DYD1_k127_1875589_14 PFAM Transglycosylase-associated protein - - - 0.000000000000000000000000005088 112.0
DYD1_k127_1875589_15 Dodecin K09165 GO:0005575,GO:0005618,GO:0005623,GO:0005886,GO:0016020,GO:0030312,GO:0044464,GO:0071944 - 0.000000000000000000000183 100.0
DYD1_k127_1875589_2 Receptor family ligand binding region K01999 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004412 565.0
DYD1_k127_1875589_3 Belongs to the citrate synthase family K01659 GO:0003674,GO:0003824,GO:0004108,GO:0006082,GO:0006091,GO:0006113,GO:0006629,GO:0006631,GO:0008150,GO:0008152,GO:0009987,GO:0015980,GO:0016740,GO:0016746,GO:0016829,GO:0016830,GO:0016833,GO:0016999,GO:0017144,GO:0019541,GO:0019679,GO:0019752,GO:0032787,GO:0036440,GO:0043436,GO:0044237,GO:0044238,GO:0044255,GO:0044281,GO:0046459,GO:0046912,GO:0050440,GO:0055114,GO:0071704 2.3.3.5 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008634 526.0
DYD1_k127_1875589_4 Branched-chain amino acid transport system permease K01998 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003905 445.0
DYD1_k127_1875589_5 Branched-chain amino acid transport K01996 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009424 402.0
DYD1_k127_1875589_6 Catalyzes the thermodynamically favored C-C bond cleavage of (2R,3S)-2-methylisocitrate to yield pyruvate and succinate K03417 - 4.1.3.30 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001859 393.0
DYD1_k127_1875589_7 Branched-chain amino acid ATP-binding cassette transporter K01995 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006802 380.0
DYD1_k127_1875589_8 Belongs to the binding-protein-dependent transport system permease family K01997 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003541 362.0
DYD1_k127_1875589_9 Phosphoenolpyruvate phosphomutase K01841 - 5.4.2.9 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002283 314.0
DYD1_k127_1888967_0 Glutathione S-transferase, C-terminal domain K00799 - 2.5.1.18 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000918 301.0
DYD1_k127_1888967_1 Protein of unknown function (DUF423) - - - 0.000000000000000000000000000000000000000309 153.0
DYD1_k127_1888967_2 Protein of unknown function (DUF502) - - - 0.000000000000000000000000000000001253 133.0
DYD1_k127_1888967_3 - - - - 0.000000000000000000000001781 111.0
DYD1_k127_1891289_0 Acetyl-coenzyme A transporter 1 K08218 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000001655 282.0
DYD1_k127_1891289_1 Catalyzes the reduction of 1-pyrroline-5-carboxylate (PCA) to L-proline K00286 - 1.5.1.2 0.00000000000000000000000000000000000000000000000000000000000000000000000005226 254.0
DYD1_k127_1891289_2 integral membrane protein K02221 GO:0005575,GO:0005623,GO:0005886,GO:0016020,GO:0044464,GO:0071944 - 0.0000000000000000000000000000000000000000002008 167.0
DYD1_k127_1891289_3 Belongs to the UPF0235 family K09131 - - 0.00000000000000000000000001645 111.0
DYD1_k127_1895287_0 PFAM Glycosyl transferase, family 20 K00697,K16055 - 2.4.1.15,2.4.1.347,3.1.3.12 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002423 582.0
DYD1_k127_1895287_1 Removes the phosphate from trehalose 6-phosphate to produce free trehalose K01087 - 3.1.3.12 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006607 526.0
DYD1_k127_1895287_2 Protein of unknown function (DUF2817) - - - 0.000000000000000000000000000000000000000000000000001581 197.0
DYD1_k127_1895287_3 protein conserved in bacteria - - - 0.00000000000000000000000000000000000000003184 156.0
DYD1_k127_1895287_4 PFAM Glycoside hydrolase family 65, central catalytic - - - 0.000000000000000000000000000000000000001721 151.0
DYD1_k127_1954489_0 response regulator receiver K02667 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001218 538.0
DYD1_k127_1954489_1 Histidine kinase K02668 - 2.7.13.3 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001279 364.0
DYD1_k127_1954489_2 Belongs to the N-Me-Phe pilin family K02650 - - 0.00000000000000002356 83.0
DYD1_k127_1954489_3 Protein of unknown function (DUF3106) - - - 0.00003493 50.0
DYD1_k127_1960676_0 Aldo/keto reductase family K05882 - 1.1.1.91 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009298 518.0
DYD1_k127_1960676_1 signal transduction protein containing a membrane domain, an EAL and a GGDEF domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003739 516.0
DYD1_k127_1960676_10 protein containing double-stranded beta helix domain - - - 0.0000000000000000000000000000000000000000000002223 177.0
DYD1_k127_1960676_11 Activator of Hsp90 ATPase homolog 1-like protein - - - 0.0000000000000000000000000000000000000007883 152.0
DYD1_k127_1960676_12 TfoX N-terminal domain - - - 0.0000000000000000000000000000000001154 138.0
DYD1_k127_1960676_13 - - - - 0.0000000000000000000000000000005043 128.0
DYD1_k127_1960676_14 Transcriptional regulator ArsR family - - - 0.0000000000000000000000000000755 124.0
DYD1_k127_1960676_2 Ketopantoate reductase PanE/ApbA C terminal K00077 - 1.1.1.169 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001008 444.0
DYD1_k127_1960676_3 RimK-like ATP-grasp domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001902 433.0
DYD1_k127_1960676_4 Catalyzes the S-adenosylmethionine monomethyl esterification of trans-aconitate K00598 - 2.1.1.144 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000002125 295.0
DYD1_k127_1960676_5 transmembrane transcriptional regulator (Anti-sigma factor) - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000006267 268.0
DYD1_k127_1960676_6 Glutathione S-transferase, C-terminal domain K00799 - 2.5.1.18 0.000000000000000000000000000000000000000000000000000000000000000000001077 242.0
DYD1_k127_1960676_7 COG2084 3-hydroxyisobutyrate dehydrogenase and related beta-hydroxyacid dehydrogenases K00042 - 1.1.1.60 0.000000000000000000000000000000000000000000000000000000000000000000002466 237.0
DYD1_k127_1960676_8 Bacterial protein of unknown function (DUF899) - - - 0.000000000000000000000000000000000000000000000000000000000000000004665 232.0
DYD1_k127_1960676_9 Belongs to the sigma-70 factor family. ECF subfamily K03088 - - 0.000000000000000000000000000000000000000000000003706 178.0
DYD1_k127_2019283_0 PFAM dehydrogenase E1 component K21416 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000195 435.0
DYD1_k127_2019283_1 PFAM 6-phosphogluconate dehydrogenase NAD-binding K00020 - 1.1.1.31 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008948 339.0
DYD1_k127_2019283_2 PFAM Transketolase central region K21417 - - 0.00000000000000000000000000000002683 129.0
DYD1_k127_2060201_0 Carboxyl transferase domain K01969 - 6.4.1.4 9.634e-261 813.0
DYD1_k127_2060201_1 2-oxoacid dehydrogenases acyltransferase (catalytic domain) K00627 - 2.3.1.12 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004443 538.0
DYD1_k127_2060201_2 Trk system potassium uptake protein K03498 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001524 498.0
DYD1_k127_2060201_3 PFAM Alcohol dehydrogenase K00344 - 1.6.5.5 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003556 449.0
DYD1_k127_2060201_4 PFAM Citrate transporter - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003652 419.0
DYD1_k127_2060201_5 Hydroxymethylglutaryl-CoA lyase K01640 - 4.1.3.4 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006065 406.0
DYD1_k127_2060201_6 Pyruvate 2-oxoglutarate dehydrogenase complex, dehydrogenase K00162,K21417 - 1.2.4.1 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000104 362.0
DYD1_k127_2060201_7 enoyl-CoA hydratase K13766 - 4.2.1.18 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000004178 290.0
DYD1_k127_2060201_8 Universal stress protein - - - 0.00000000000000000000000000000000000002794 147.0
DYD1_k127_2067467_0 Belongs to the 'phage' integrase family - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003903 385.0
DYD1_k127_2067467_2 - - - - 0.000000007705 61.0
DYD1_k127_2067467_3 Belongs to the MT-A70-like family - - - 0.00000004537 62.0
DYD1_k127_2067467_4 - - - - 0.00001194 55.0
DYD1_k127_2067467_5 Concanavalin A-like lectin/glucanases superfamily - - - 0.0002915 49.0
DYD1_k127_2067467_6 previously reported genes of - - - 0.0007338 47.0
DYD1_k127_2085615_0 NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain K00335 - 1.6.5.3 3.215e-200 642.0
DYD1_k127_2085615_1 NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient K00333 - 1.6.5.3 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002589 498.0
DYD1_k127_2085615_2 NADH-quinone oxidoreductase K00336 - 1.6.5.3 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004605 503.0
DYD1_k127_2085615_3 NADH dehydrogenase K00334 - 1.6.5.3 0.000000000000000000000000000000000000000000000000000000000000001573 224.0
DYD1_k127_2089303_0 Glucosamine-6-phosphate isomerases/6-phosphogluconolactonase K01057 - 3.1.1.31 0.00000000000000000000000000000000000000000000000000000000000000000000000000009736 265.0
DYD1_k127_2089303_1 Glucokinase K00845 - 2.7.1.2 0.0000000000000000000000000000000000000000000000000000000000000000000005353 246.0
DYD1_k127_2101557_0 B12 binding domain - - - 5.912e-198 636.0
DYD1_k127_2101557_1 Peptidase family U32 K08303 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000006416 280.0
DYD1_k127_2101557_2 Forms passive diffusion pores that allow small molecular weight hydrophilic materials across the outer membrane - - - 0.0000000000000000000000009685 115.0
DYD1_k127_2103895_0 The glycine cleavage system catalyzes the degradation of glycine K00605 - 2.1.2.10 9.331e-267 838.0
DYD1_k127_2103895_1 Methyl-accepting chemotaxis protein (MCP) signaling domain - - - 3.843e-261 829.0
DYD1_k127_2103895_2 Response regulator receiver K02658 - - 0.000000000000000000000000000000000000000000000000005946 183.0
DYD1_k127_2103895_3 cheY-homologous receiver domain - - - 0.000000000000000000000000000000000000000000000004079 186.0
DYD1_k127_2103895_4 ABC-type amino acid transport signal transduction systems periplasmic component domain - - - 0.00000000000000000000000000000000000002714 151.0
DYD1_k127_2103895_5 CheW-like domain - - - 0.0000000000000000000005977 103.0
DYD1_k127_2108317_0 Glutamate synthase K00265 GO:0003674,GO:0003824,GO:0004355,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006082,GO:0006520,GO:0006536,GO:0006537,GO:0006541,GO:0006807,GO:0008150,GO:0008152,GO:0008652,GO:0009058,GO:0009064,GO:0009084,GO:0009987,GO:0015930,GO:0016053,GO:0016491,GO:0016638,GO:0016639,GO:0019676,GO:0019740,GO:0019752,GO:0043436,GO:0043648,GO:0043650,GO:0044237,GO:0044238,GO:0044249,GO:0044281,GO:0044283,GO:0044424,GO:0044444,GO:0044464,GO:0045181,GO:0046394,GO:0055114,GO:0071704,GO:1901564,GO:1901566,GO:1901576,GO:1901605,GO:1901607 1.4.1.13,1.4.1.14 0.0 1731.0
DYD1_k127_2108317_1 Belongs to the dGTPase family. Type 2 subfamily K01129 - 3.1.5.1 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005513 483.0
DYD1_k127_2108317_2 Catalyzes the conversion of 3-deoxy-D-arabino- heptulosonate 7-phosphate (DAHP) to dehydroquinate (DHQ) K01735 - 4.2.3.4 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007276 450.0
DYD1_k127_2109198_0 HipA-like C-terminal domain K07154 - 2.7.11.1 4.788e-205 646.0
DYD1_k127_2109198_1 - - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001829 328.0
DYD1_k127_2109198_2 Belongs to the 'phage' integrase family - - - 0.00000000000000000000000000000000000000000000000000000000000000008107 237.0
DYD1_k127_2109198_3 Type III restriction protein res subunit - - - 0.000000000000000000000000000000000156 133.0
DYD1_k127_2109198_4 Protein of unknown function (DUF2283) - - - 0.00000000000000000000001474 100.0
DYD1_k127_2109198_5 Helix-turn-helix XRE-family like proteins - - - 0.000000001255 63.0
DYD1_k127_2137674_0 transport system, permease component K13894 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009674 515.0
DYD1_k127_2137674_1 transport system, permease component K13895 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004562 501.0
DYD1_k127_2137674_2 COG4166 ABC-type oligopeptide transport system, periplasmic component K13893 - - 0.00000000000000000000000000000000000000000000000000000000000000000000007205 246.0
DYD1_k127_2141887_0 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain K01652,K12673 - 2.2.1.6,2.5.1.66 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001571 609.0
DYD1_k127_2141887_1 Major facilitator Superfamily - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001394 375.0
DYD1_k127_2141887_2 Belongs to the enoyl-CoA hydratase isomerase family K01692,K11264 - 4.1.1.41,4.2.1.17 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000771 320.0
DYD1_k127_2141887_3 Amino-transferase class IV K00826 - 2.6.1.42 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000001079 305.0
DYD1_k127_2141887_4 PFAM Class II Aldolase and Adducin N-terminal domain K01628,K22130 - 4.1.1.104,4.1.2.17 0.00000000000000000000000000000000000000000000000000000000000000000000000000007917 263.0
DYD1_k127_2141887_5 Aminoacyl-tRNA editing domain K03976 - - 0.0000000000000000000000000000000000000000000000000000313 196.0
DYD1_k127_2141887_6 Phospholipase - - - 0.0000000000000000000000000000000000000000000000004905 188.0
DYD1_k127_2163549_0 C-terminal, D2-small domain, of ClpB protein K03694 - - 0.0 1035.0
DYD1_k127_2163549_1 Catalyzes the 2-thiolation of uridine at the wobble position (U34) of tRNA, leading to the formation of s(2)U34 K00566 - 2.8.1.13 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003171 436.0
DYD1_k127_2163549_2 Belongs to the lyase 1 family. Adenylosuccinate lyase subfamily K01756 - 4.3.2.2 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001684 307.0
DYD1_k127_2163549_3 May conjugate Arg from its aminoacyl-tRNA to the N- termini of proteins containing an N-terminal aspartate or glutamate K21420 - 2.3.2.29 0.0000000000000000000000000000000000000000000000000000000000000000003712 233.0
DYD1_k127_2163549_4 Involved in the modulation of the specificity of the ClpAP-mediated ATP-dependent protein degradation K06891 - - 0.00000000000000000000000000000000000008253 147.0
DYD1_k127_2163549_5 One of the essential components for the initiation of protein synthesis. Stabilizes the binding of IF-2 and IF-3 on the 30S subunit to which N-formylmethionyl-tRNA(fMet) subsequently binds. Helps modulate mRNA selection, yielding the 30S pre- initiation complex (PIC). Upon addition of the 50S ribosomal subunit IF-1, IF-2 and IF-3 are released leaving the mature 70S translation initation complex K02518 - - 0.00000000000000000000000000000000001185 138.0
DYD1_k127_2163549_6 Cold shock K03704 - - 0.000000000000000000000007836 102.0
DYD1_k127_2170248_0 efflux pump K18138,K18146 - - 0.0 1447.0
DYD1_k127_2170248_1 Peptidase family M41 K03798 - - 1.136e-256 810.0
DYD1_k127_2170248_10 Belongs to the CinA family K03742,K03743 - 3.5.1.42 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000002523 311.0
DYD1_k127_2170248_11 Amino-transferase class IV - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000405 297.0
DYD1_k127_2170248_12 cheY-homologous receiver domain - - - 0.0000000000000000000000000000000000000000000000000000000000000006887 224.0
DYD1_k127_2170248_13 Acyl-CoA dehydrogenase, N-terminal domain K00248,K00249,K18244 - 1.3.8.1,1.3.8.7 0.000000000000000000000000000000000000000000000000000000000000003901 217.0
DYD1_k127_2170248_14 PFAM Peptidase M22, glycoprotease K14742 - - 0.00000000000000000000000000000000000000000000000000000000000003515 221.0
DYD1_k127_2170248_15 COG0651 Formate hydrogenlyase subunit 3 Multisubunit Na H antiporter, MnhD subunit K05568 - - 0.0000000000000000000000000000000000000000000000000000000000001931 214.0
DYD1_k127_2170248_16 dioxygenase K03119 - 1.14.11.17 0.000000000000000000000000000000000000000000000000000000002505 211.0
DYD1_k127_2170248_17 protein tyrosine phosphatase activity K01104 - 3.1.3.48 0.000000000000000000000000000000000000000002743 161.0
DYD1_k127_2170248_18 Protein of unknown function (DUF3617) - - - 0.0000000000000000000000000000000000005004 147.0
DYD1_k127_2170248_19 Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family K03585 - - 0.000000000000000000000000008795 112.0
DYD1_k127_2170248_2 PFAM NADH Ubiquinone plastoquinone (complex I) K05568 - - 3.03e-247 777.0
DYD1_k127_2170248_20 - - - - 0.000000000000000000000001104 106.0
DYD1_k127_2170248_21 - - - - 0.0000000000002421 76.0
DYD1_k127_2170248_3 Helicase K03722 - 3.6.4.12 1.93e-216 690.0
DYD1_k127_2170248_4 Proton-conducting membrane transporter K05568 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000114 588.0
DYD1_k127_2170248_5 GGDEF domain containing protein - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001779 523.0
DYD1_k127_2170248_6 Acyl-CoA dehydrogenase, C-terminal domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001231 418.0
DYD1_k127_2170248_7 TIGRFAM RND efflux system, outer membrane lipoprotein, NodT family K18139 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001853 419.0
DYD1_k127_2170248_8 Domain present in PSD-95, Dlg, and ZO-1/2. - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003107 325.0
DYD1_k127_2170248_9 PAS fold - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000001851 316.0
DYD1_k127_2178395_0 PFAM peptidase S15 K06978 - - 0.0 1083.0
DYD1_k127_2178395_1 ubiquitin protein ligase binding - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005202 482.0
DYD1_k127_2178395_2 DnaJ-class molecular chaperone K05516 GO:0003674,GO:0003676,GO:0003677,GO:0005488,GO:0097159,GO:1901363 - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005701 413.0
DYD1_k127_2178395_3 MarC family integral membrane protein K05595 - - 0.000000000000000000000000000000000000000000000000000000000000000000143 235.0
DYD1_k127_2178395_4 Homoserine dehydrogenase K00928,K12524 - 1.1.1.3,2.7.2.4 0.00000000000000000000000000005823 122.0
DYD1_k127_2178395_5 MerR HTH family regulatory protein K18997 - - 0.000000000000000000000004903 106.0
DYD1_k127_2178395_6 PFAM Major Facilitator Superfamily - - - 0.00003186 46.0
DYD1_k127_2179116_0 Tripartite tricarboxylate transporter family receptor - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006861 335.0
DYD1_k127_2179116_1 Tripartite tricarboxylate transporter TctB family K07794 - - 0.000000000002317 70.0
DYD1_k127_221643_0 Component of the ubiquinol-cytochrome c reductase complex (complex III or cytochrome b-c1 complex), which is a respiratory chain that generates an electrochemical potential coupled to ATP synthesis K00412 - - 3.585e-203 640.0
DYD1_k127_221643_1 IGPS catalyzes the conversion of PRFAR and glutamine to IGP, AICAR and glutamate. The HisF subunit catalyzes the cyclization activity that produces IGP and AICAR from PRFAR using the ammonia provided by the HisH subunit K02500 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002476 409.0
DYD1_k127_221643_10 1-(5-phosphoribosyl)-5- (5-phosphoribosylamino)methylideneamino imidazole-4-carboxamide isomerase K01814,K01817 - 5.3.1.16,5.3.1.24 0.00000000000000000000000000000000000000000000000000000002275 200.0
DYD1_k127_221643_11 Cytidylyltransferase-like K21345 - 2.7.7.70 0.0000000000000000000000000000000000000000000000000000008652 205.0
DYD1_k127_221643_12 Catalyzes the hydrolysis of the adenine ring of phosphoribosyl-AMP K01496,K11755 - 3.5.4.19,3.6.1.31 0.000000000000000000000000000000000000000000000000001541 188.0
DYD1_k127_221643_13 BON domain - - - 0.000000000000000000000000000000000000000006752 165.0
DYD1_k127_221643_14 phosphoribosyl-ATP pyrophosphohydrolase K01523 GO:0000105,GO:0003674,GO:0003824,GO:0004636,GO:0006082,GO:0006520,GO:0006547,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0008652,GO:0009058,GO:0009987,GO:0016053,GO:0016462,GO:0016787,GO:0016817,GO:0016818,GO:0018130,GO:0019438,GO:0019752,GO:0034641,GO:0043436,GO:0044237,GO:0044238,GO:0044249,GO:0044281,GO:0044283,GO:0046394,GO:0046483,GO:0052803,GO:0071704,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576,GO:1901605,GO:1901607 3.6.1.31 0.00000000000000000000000000000000000003679 145.0
DYD1_k127_221643_15 Stringent starvation protein B K03600 - - 0.00000000000000000000000000001346 126.0
DYD1_k127_221643_16 Belongs to the UPF0102 family K07460 - - 0.0000000000000000000000000002045 119.0
DYD1_k127_221643_17 Catalyzes the 2'-O-methylation of the ribose of cytidine 1402 (C1402) in 16S rRNA K07056 GO:0000154,GO:0000451,GO:0000453,GO:0001510,GO:0003674,GO:0003824,GO:0006139,GO:0006364,GO:0006396,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0008168,GO:0008171,GO:0008173,GO:0008649,GO:0008757,GO:0009451,GO:0009987,GO:0010467,GO:0016070,GO:0016072,GO:0016434,GO:0016740,GO:0016741,GO:0022613,GO:0031167,GO:0032259,GO:0034470,GO:0034641,GO:0034660,GO:0042254,GO:0043170,GO:0043412,GO:0043414,GO:0044085,GO:0044237,GO:0044238,GO:0044260,GO:0046483,GO:0070677,GO:0071704,GO:0071840,GO:0090304,GO:0140098,GO:0140102,GO:1901360 2.1.1.198 0.000000000000000000000001518 105.0
DYD1_k127_221643_18 Part of the twin-arginine translocation (Tat) system that transports large folded proteins containing a characteristic twin-arginine motif in their signal peptide across membranes. Together with TatC, TatB is part of a receptor directly interacting with Tat signal peptides. TatB may form an oligomeric binding site that transiently accommodates folded Tat precursor proteins before their translocation K03117 GO:0003674,GO:0005215,GO:0005488,GO:0005515,GO:0005575,GO:0005623,GO:0005886,GO:0005887,GO:0006810,GO:0006886,GO:0008104,GO:0008150,GO:0008320,GO:0008565,GO:0009977,GO:0015031,GO:0015291,GO:0015399,GO:0015405,GO:0015450,GO:0015833,GO:0016020,GO:0016021,GO:0022804,GO:0022857,GO:0022884,GO:0031224,GO:0031226,GO:0032991,GO:0033036,GO:0033281,GO:0034613,GO:0042802,GO:0042886,GO:0042887,GO:0043953,GO:0044425,GO:0044459,GO:0044464,GO:0045184,GO:0046907,GO:0051179,GO:0051234,GO:0051641,GO:0051649,GO:0055085,GO:0065002,GO:0070727,GO:0071702,GO:0071705,GO:0071806,GO:0071944,GO:0098796,GO:0098797,GO:1904680 - 0.00000000000000002775 88.0
DYD1_k127_221643_19 PFAM FAD linked oxidase domain protein K03777 - 1.1.5.12 0.0000000000000000403 82.0
DYD1_k127_221643_2 Trypsin K04691,K04772 GO:0003674,GO:0003824,GO:0004175,GO:0004252,GO:0005488,GO:0005515,GO:0005575,GO:0005623,GO:0005886,GO:0005887,GO:0006508,GO:0006807,GO:0006950,GO:0008150,GO:0008152,GO:0008233,GO:0008236,GO:0009897,GO:0009986,GO:0009987,GO:0010033,GO:0016020,GO:0016021,GO:0016787,GO:0017171,GO:0019538,GO:0030288,GO:0030313,GO:0031224,GO:0031226,GO:0031233,GO:0031975,GO:0033554,GO:0035966,GO:0035967,GO:0042221,GO:0042597,GO:0042802,GO:0043170,GO:0044238,GO:0044425,GO:0044459,GO:0044464,GO:0050896,GO:0051716,GO:0051788,GO:0070011,GO:0070887,GO:0071218,GO:0071310,GO:0071575,GO:0071704,GO:0071944,GO:0098552,GO:0140096,GO:1901564 - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003574 383.0
DYD1_k127_221643_20 Part of the twin-arginine translocation (Tat) system that transports large folded proteins containing a characteristic twin-arginine motif in their signal peptide across membranes. TatA could form the protein-conducting channel of the Tat system K03116 - - 0.00000000000002755 76.0
DYD1_k127_221643_21 FAD FMN-containing dehydrogenases K00102,K03777 - 1.1.2.4,1.1.5.12 0.0000000003618 68.0
DYD1_k127_221643_3 PFAM LppC K07121 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002595 355.0
DYD1_k127_221643_4 Part of the twin-arginine translocation (Tat) system that transports large folded proteins containing a characteristic twin-arginine motif in their signal peptide across membranes. Together with TatB, TatC is part of a receptor directly interacting with Tat signal peptides K03118 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000005264 299.0
DYD1_k127_221643_5 Component of the ubiquinol-cytochrome c reductase complex (complex III or cytochrome b-c1 complex), which is a respiratory chain that generates an electrochemical potential coupled to ATP synthesis K00411 - 1.10.2.2 0.00000000000000000000000000000000000000000000000000000000000000000000000001405 256.0
DYD1_k127_221643_6 Cytochrome C1 family K00413 - - 0.00000000000000000000000000000000000000000000000000000000000000000000001198 249.0
DYD1_k127_221643_7 Catalyzes the isomerization of sedoheptulose 7-phosphate in D-glycero-D-manno-heptose 7-phosphate K03271 - 5.3.1.28 0.00000000000000000000000000000000000000000000000000000000000000000000002942 252.0
DYD1_k127_221643_8 PFAM Appr-1-p processing domain protein - - - 0.00000000000000000000000000000000000000000000000000000000000000009516 226.0
DYD1_k127_221643_9 Stringent starvation protein A K03599 - - 0.0000000000000000000000000000000000000000000000000000000000000001084 229.0
DYD1_k127_2250287_0 Bacterial transferase hexapeptide (six repeats) K00640 - 2.3.1.30 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004213 351.0
DYD1_k127_2250287_1 Rrf2 family transcriptional regulator, iron-sulfur cluster assembly K13643 - - 0.000000000000000000000000000000000000000000000000000003675 191.0
DYD1_k127_2250287_2 Catalyzes the formation of 2'O-methylated cytidine (Cm32) or 2'O-methylated uridine (Um32) at position 32 in tRNA K02533 - - 0.00000000000000000000000000000000000000000001029 167.0
DYD1_k127_2271811_0 - - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000008261 267.0
DYD1_k127_2271811_1 - - - - 0.000000000000000000000000000000000000000000000000000000001092 207.0
DYD1_k127_2271811_2 Cytochrome c - - - 0.000000000000000000000000000000004713 134.0
DYD1_k127_2271811_3 Domain of unknown function DUF302 - - - 0.00000000000000000000001024 104.0
DYD1_k127_2292120_0 Polysaccharide chain length determinant protein - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004563 458.0
DYD1_k127_2292120_1 Polysaccharide biosynthesis/export protein K01991 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000009217 265.0
DYD1_k127_2292120_2 AAA domain K08252,K16692 - 2.7.10.1 0.0000000000000001806 87.0
DYD1_k127_2324267_0 CoA-transferase family III - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002213 417.0
DYD1_k127_2324267_1 Dihydrodipicolinate synthetase family K01714 - 4.3.3.7 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000334 321.0
DYD1_k127_2342024_0 Thiolase, C-terminal domain K00626 - 2.3.1.9 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002006 592.0
DYD1_k127_2342024_1 2-hydroxychromene-2-carboxylate isomerase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000003454 249.0
DYD1_k127_2342024_2 protein, possibly involved in aromatic compounds catabolism - - - 0.000000000000000000000000000000000000000000000000004468 188.0
DYD1_k127_2342024_3 PFAM Enoyl-CoA hydratase isomerase - - - 0.0000000000000000000003147 104.0
DYD1_k127_2342024_4 Protein of unknown function (DUF1289) K06938 - - 0.0000000001057 66.0
DYD1_k127_2348619_0 Transmembrane secretion effector - - - 3.271e-238 754.0
DYD1_k127_2348619_1 PFAM Cupin 2 conserved barrel domain protein - - - 0.0000000000000000000000000000002177 128.0
DYD1_k127_2348619_2 alcohol dehydrogenase K00008 - 1.1.1.14 0.0000000000000000000000003394 111.0
DYD1_k127_2348619_3 Domain of unknown function (DUF4156) - - - 0.000000000000000000005088 97.0
DYD1_k127_2375352_0 Bacterial transcriptional activator domain - - - 1.085e-205 678.0
DYD1_k127_2375352_1 Serine aminopeptidase, S33 - - - 0.000000000000000000000000000000000000009012 149.0
DYD1_k127_2375352_2 Tetratricopeptide repeat - - - 0.00000000000000000000002607 104.0
DYD1_k127_2380509_0 Lysin motif K08307 - - 7.446e-208 670.0
DYD1_k127_2380509_1 Major Facilitator Superfamily - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004082 438.0
DYD1_k127_2380509_10 - - - - 0.0000000000000000000000000000000006283 134.0
DYD1_k127_2380509_11 FKBP-type peptidyl-prolyl cis-trans isomerase K03775 - 5.2.1.8 0.000000000000000000000000000000001271 137.0
DYD1_k127_2380509_13 outer membrane lipoprotein - - - 0.00000000000000000000000000000003922 132.0
DYD1_k127_2380509_14 RNA recognition motif - - - 0.000000000000000000000000000001777 122.0
DYD1_k127_2380509_15 - - - - 0.000000000000000000000005181 106.0
DYD1_k127_2380509_16 LysR substrate binding domain - - - 0.00000000000000000000003133 102.0
DYD1_k127_2380509_17 repeat protein - - - 0.0000000000001542 73.0
DYD1_k127_2380509_2 TGS domain K06944 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006808 410.0
DYD1_k127_2380509_3 fumarylacetoacetate (FAA) hydrolase K16165 GO:0003674,GO:0003824,GO:0005575,GO:0005622,GO:0005623,GO:0005634,GO:0005654,GO:0005737,GO:0005739,GO:0005829,GO:0008948,GO:0016787,GO:0016822,GO:0016823,GO:0016829,GO:0016830,GO:0016831,GO:0018773,GO:0031974,GO:0031981,GO:0034545,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0043233,GO:0044422,GO:0044424,GO:0044428,GO:0044444,GO:0044446,GO:0044464,GO:0070013 3.7.1.20 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009353 316.0
DYD1_k127_2380509_4 Responsible for synthesis of pseudouridine from uracil- 13 in transfer RNAs K06176 - 5.4.99.27 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000008551 293.0
DYD1_k127_2380509_5 ParB-like nuclease domain K03497 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000001635 274.0
DYD1_k127_2380509_6 MmgE/PrpD family - - - 0.0000000000000000000000000000000000000000000000000000000000000000002806 235.0
DYD1_k127_2380509_7 His Kinase A (phosphoacceptor) domain - - - 0.000000000000000000000000000000000000000000000000000000001001 215.0
DYD1_k127_2380509_8 - - - - 0.00000000000000000000000000000000000000000000000001334 182.0
DYD1_k127_2380509_9 Peptidyl-prolyl cis-trans isomerase K03775 - 5.2.1.8 0.00000000000000000000000000000000000000000000006028 176.0
DYD1_k127_2399860_0 TIGRFAM PAS sensor protein - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000001874 307.0
DYD1_k127_2429793_0 FAD linked oxidase K00104 - 1.1.3.15 3.169e-255 793.0
DYD1_k127_2429793_1 COG4166 ABC-type oligopeptide transport system, periplasmic component K13893 - - 3.154e-203 647.0
DYD1_k127_2429793_2 FAD binding domain K11472 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003198 441.0
DYD1_k127_2429793_3 - - - - 0.000000000000000000000004914 115.0
DYD1_k127_243900_0 TIGRFAM Acetolactate synthase, large subunit, biosynthetic K01652 - 2.2.1.6 8.682e-294 908.0
DYD1_k127_243900_1 Involved in the biosynthesis of branched-chain amino acids (BCAA). Catalyzes an alkyl-migration followed by a ketol- acid reduction of (S)-2-acetolactate (S2AL) to yield (R)-2,3- dihydroxy-isovalerate. In the isomerase reaction, S2AL is rearranged via a Mg-dependent methyl migration to produce 3- hydroxy-3-methyl-2-ketobutyrate (HMKB). In the reductase reaction, this 2-ketoacid undergoes a metal-dependent reduction by NADPH to yield (R)-2,3-dihydroxy-isovalerate K00053 - 1.1.1.86 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006909 506.0
DYD1_k127_243900_2 Catalyzes the formation of phosphatidylethanolamine (PtdEtn) from phosphatidylserine (PtdSer) K01613 - 4.1.1.65 0.00000000000000000000000000000000000000000000000000000000000000000000000000000008113 272.0
DYD1_k127_243900_3 Belongs to the CDP-alcohol phosphatidyltransferase class-I family K17103 - 2.7.8.8 0.00000000000000000000000000000000000000000000000000000000000000000000000000003274 263.0
DYD1_k127_243900_4 ACT domain K01653 - 2.2.1.6 0.0000000000000000000000000000000000000000000000000000000000000000000000002544 249.0
DYD1_k127_2449214_0 radical SAM domain protein - - - 1.144e-202 647.0
DYD1_k127_2449214_1 radical SAM domain protein - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002025 598.0
DYD1_k127_2449214_10 helix_turn_helix, arabinose operon control protein K07720 - - 0.00000000000000008424 86.0
DYD1_k127_2449214_11 - - - - 0.000000000000007354 83.0
DYD1_k127_2449214_12 Domain of unknown function (DUF1902) - - - 0.000001686 51.0
DYD1_k127_2449214_2 Catalyzes the condensation of iminoaspartate with dihydroxyacetone phosphate to form quinolinate K03517 - 2.5.1.72 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002114 546.0
DYD1_k127_2449214_3 belongs to the nudix hydrolase family - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002808 461.0
DYD1_k127_2449214_4 Adenylate cyclase, family 3 (some proteins contain HAMP domain) K01768 - 4.6.1.1 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002844 369.0
DYD1_k127_2449214_5 GH3 auxin-responsive promoter - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001085 332.0
DYD1_k127_2449214_6 sigma factor activity K03088 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000001029 280.0
DYD1_k127_2449214_7 - - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000003215 261.0
DYD1_k127_2449214_8 PFAM Methyltransferase domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000002578 252.0
DYD1_k127_2449214_9 Type IV Pilus-assembly protein W K02672 - - 0.00000000000000000000000000000000000000000000000000000000000001198 230.0
DYD1_k127_2468163_0 Cysteine-rich domain - - - 1.047e-214 673.0
DYD1_k127_2468163_1 type IV, pilus assembly K02652 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001512 549.0
DYD1_k127_2468163_2 Protein of unknown function (DUF3501) - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000002791 268.0
DYD1_k127_2468163_3 PFAM Rubrerythrin - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000004438 256.0
DYD1_k127_2468163_4 Topoisomerase IV is essential for chromosome segregation. It relaxes supercoiled DNA. Performs the decatenation events required during the replication of a circular DNA molecule K02622 - - 0.0000000002612 64.0
DYD1_k127_2472535_0 A type II topoisomerase that negatively supercoils closed circular double-stranded (ds) DNA in an ATP-dependent manner to modulate DNA topology and maintain chromosomes in an underwound state. Negative supercoiling favors strand separation, and DNA replication, transcription, recombination and repair, all of which involve strand separation. Also able to catalyze the interconversion of other topological isomers of dsDNA rings, including catenanes and knotted rings. Type II topoisomerases break and join 2 DNA strands simultaneously in an ATP-dependent manner K02470 GO:0000166,GO:0003674,GO:0003676,GO:0003677,GO:0003824,GO:0003916,GO:0003918,GO:0005488,GO:0005524,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006139,GO:0006259,GO:0006265,GO:0006351,GO:0006725,GO:0006807,GO:0006996,GO:0007059,GO:0008094,GO:0008144,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009295,GO:0009330,GO:0009987,GO:0010467,GO:0016043,GO:0016070,GO:0016462,GO:0016787,GO:0016817,GO:0016818,GO:0016853,GO:0016887,GO:0017076,GO:0017111,GO:0018130,GO:0019438,GO:0030554,GO:0032553,GO:0032555,GO:0032559,GO:0032774,GO:0032991,GO:0034335,GO:0034641,GO:0034645,GO:0034654,GO:0035639,GO:0036094,GO:0042221,GO:0042493,GO:0042623,GO:0043167,GO:0043168,GO:0043170,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044271,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0050896,GO:0051276,GO:0061505,GO:0071103,GO:0071704,GO:0071840,GO:0090304,GO:0097159,GO:0097367,GO:0097659,GO:0140097,GO:1901265,GO:1901360,GO:1901362,GO:1901363,GO:1901576 5.99.1.3 0.0 1077.0
DYD1_k127_2472535_1 May play a key role in the regulation of the intracellular concentration of adenosylhomocysteine K01251 GO:0000096,GO:0003674,GO:0003824,GO:0004013,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006082,GO:0006139,GO:0006520,GO:0006534,GO:0006555,GO:0006575,GO:0006725,GO:0006732,GO:0006790,GO:0006807,GO:0008150,GO:0008152,GO:0009066,GO:0009069,GO:0009116,GO:0009119,GO:0009987,GO:0016787,GO:0016801,GO:0016802,GO:0017144,GO:0019752,GO:0033353,GO:0034641,GO:0042278,GO:0043436,GO:0044237,GO:0044238,GO:0044281,GO:0044424,GO:0044444,GO:0044464,GO:0046128,GO:0046439,GO:0046483,GO:0046498,GO:0046500,GO:0051186,GO:0055086,GO:0071704,GO:0072521,GO:1901135,GO:1901360,GO:1901564,GO:1901605,GO:1901657 3.3.1.1 1.436e-238 743.0
DYD1_k127_2472535_10 NAD-binding protein involved in the addition of a carboxymethylaminomethyl (cmnm) group at the wobble position (U34) of certain tRNAs, forming tRNA-cmnm(5)s(2)U34 K03495 GO:0000166,GO:0001510,GO:0002097,GO:0002098,GO:0003674,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006139,GO:0006396,GO:0006399,GO:0006400,GO:0006725,GO:0006807,GO:0008033,GO:0008150,GO:0008152,GO:0009314,GO:0009411,GO:0009416,GO:0009451,GO:0009628,GO:0009987,GO:0010467,GO:0016070,GO:0030488,GO:0032259,GO:0034470,GO:0034641,GO:0034660,GO:0036094,GO:0043167,GO:0043168,GO:0043170,GO:0043412,GO:0043414,GO:0044237,GO:0044238,GO:0044260,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0048037,GO:0050660,GO:0050662,GO:0050896,GO:0071704,GO:0090304,GO:0097159,GO:1901265,GO:1901360,GO:1901363 - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004957 344.0
DYD1_k127_2472535_11 Hydrolyzes diadenosine 5',5'''-P1,P4-tetraphosphate to yield ADP K01525 - 3.6.1.41 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006525 336.0
DYD1_k127_2472535_12 conserved protein (some members contain a von Willebrand factor type A (vWA) domain) - - - 0.000000000000000000000000000000000000000000000000000000000000000000001224 251.0
DYD1_k127_2472535_13 Peptidase family M48 - - - 0.000000000000000000000000000000000000000000000000000000000000000000002018 248.0
DYD1_k127_2472535_14 PFAM ApaG domain protein K06195 - - 0.00000000000000000000000000000000000000000000000003336 182.0
DYD1_k127_2472535_15 Gamma-glutamyl cyclotransferase, AIG2-like - - - 0.00000000000000000000000009121 110.0
DYD1_k127_2472535_16 Could be involved in insertion of integral membrane proteins into the membrane K08998 - - 0.0000000000000000000000006241 109.0
DYD1_k127_2472535_17 Bacterial SH3 domain - - - 0.000000000000000004973 93.0
DYD1_k127_2472535_18 Belongs to the bacterial ribosomal protein bL34 family K02914 - - 0.00000000000008041 72.0
DYD1_k127_2472535_2 Catalyzes the formation of S-adenosylmethionine (AdoMet) from methionine and ATP. The overall synthetic reaction is composed of two sequential steps, AdoMet formation and the subsequent tripolyphosphate hydrolysis which occurs prior to release of AdoMet from the enzyme K00789 - 2.5.1.6 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001155 590.0
DYD1_k127_2472535_3 it binds specifically double-stranded DNA at a 9 bp consensus (dnaA box) 5'-TTATC CA A CA A-3'. DnaA binds to ATP and to acidic phospholipids K02313 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008909 593.0
DYD1_k127_2472535_4 Required for the insertion and or proper folding and or complex formation of integral membrane proteins into the membrane. Involved in integration of membrane proteins that insert both dependently and independently of the Sec translocase complex, as well as at least some lipoproteins. Aids folding of multispanning membrane proteins K03217 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001856 515.0
DYD1_k127_2472535_5 Exhibits a very high intrinsic GTPase hydrolysis rate. Involved in the addition of a carboxymethylaminomethyl (cmnm) group at the wobble position (U34) of certain tRNAs, forming tRNA- cmnm(5)s(2)U34 K03650 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006643 499.0
DYD1_k127_2472535_6 CHASE2 K01768 - 4.6.1.1 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001919 481.0
DYD1_k127_2472535_7 PFAM transglutaminase domain protein K22452 - 2.3.2.13 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004636 486.0
DYD1_k127_2472535_8 PFAM ATPase associated with various cellular activities, AAA_3 K03924 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003354 394.0
DYD1_k127_2472535_9 Confers DNA tethering and processivity to DNA polymerases and other proteins. Acts as a clamp, forming a ring around DNA (a reaction catalyzed by the clamp-loading complex) which diffuses in an ATP-independent manner freely and bidirectionally along dsDNA. Initially characterized for its ability to contact the catalytic subunit of DNA polymerase III (Pol III), a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria K02338 GO:0003674,GO:0003824,GO:0003887,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006139,GO:0006259,GO:0006260,GO:0006261,GO:0006271,GO:0006725,GO:0006807,GO:0006950,GO:0006974,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009360,GO:0009987,GO:0016740,GO:0016772,GO:0016779,GO:0018130,GO:0019438,GO:0022616,GO:0032991,GO:0033554,GO:0034061,GO:0034641,GO:0034645,GO:0034654,GO:0042575,GO:0042802,GO:0043170,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044271,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0050896,GO:0051716,GO:0061695,GO:0071704,GO:0071897,GO:0090304,GO:0140097,GO:1901360,GO:1901362,GO:1901576,GO:1902494,GO:1990234 2.7.7.7 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004316 396.0
DYD1_k127_2478298_0 Protein kinase domain K12132 - 2.7.11.1 2.96e-204 659.0
DYD1_k127_2478298_2 Protein of unknown function (Hypoth_ymh) - - - 0.0000000000000000000000000001966 127.0
DYD1_k127_248458_0 Belongs to the UPF0758 family K03630 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001393 323.0
DYD1_k127_248458_1 PFAM HNH endonuclease - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002281 301.0
DYD1_k127_248458_2 Belongs to the bacterial ribosomal protein bL28 family K02902 - - 0.0000000000000000000000000000001722 126.0
DYD1_k127_248458_3 PFAM Fatty acid desaturase K00507 - 1.14.19.1 0.000000000000000000001914 96.0
DYD1_k127_248458_4 Belongs to the bacterial ribosomal protein bL33 family K02913 GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0015934,GO:0022625,GO:0022626,GO:0032991,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:1990904 - 0.0000000000000000000398 90.0
DYD1_k127_2487147_0 transcriptional regulatory protein - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004491 339.0
DYD1_k127_2487147_1 Aspartyl-tRNA synthetase with relaxed tRNA specificity since it is able to aspartylate not only its cognate tRNA(Asp) but also tRNA(Asn). Reaction proceeds in two steps L-aspartate is first activated by ATP to form Asp-AMP and then transferred to the acceptor end of tRNA(Asp Asn) K01876 - 6.1.1.12 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003564 319.0
DYD1_k127_2487147_2 Alpha/beta hydrolase family - - - 0.0000000000000000000000000000000000000000000000001973 184.0
DYD1_k127_2487147_3 Nuclease that resolves Holliday junction intermediates in genetic recombination. Cleaves the cruciform structure in supercoiled DNA by nicking to strands with the same polarity at sites symmetrically opposed at the junction in the homologous arms and leaves a 5'-terminal phosphate and a 3'-terminal hydroxyl group K01159 GO:0000725,GO:0003674,GO:0003824,GO:0004518,GO:0004519,GO:0004520,GO:0004536,GO:0005575,GO:0005622,GO:0005623,GO:0006139,GO:0006259,GO:0006260,GO:0006261,GO:0006281,GO:0006310,GO:0006725,GO:0006807,GO:0006950,GO:0006974,GO:0008150,GO:0008152,GO:0008821,GO:0009058,GO:0009059,GO:0009314,GO:0009628,GO:0009987,GO:0016787,GO:0016788,GO:0016889,GO:0016894,GO:0031297,GO:0032991,GO:0033554,GO:0034641,GO:0034645,GO:0043170,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044424,GO:0044464,GO:0045005,GO:0046483,GO:0048476,GO:0050896,GO:0051716,GO:0071704,GO:0071932,GO:0090304,GO:0090305,GO:0140097,GO:1901360,GO:1901576 3.1.22.4 0.0000000000000000000000000000000000007996 142.0
DYD1_k127_2487147_4 pfam nudix K08310 - 3.6.1.67 0.00000000000000000000000000000000000707 141.0
DYD1_k127_2491519_0 Exodeoxyribonuclease III xth K01142 - 3.1.11.2 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003646 377.0
DYD1_k127_2491519_1 Acetyl-coenzyme A transporter 1 K08218 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002373 325.0
DYD1_k127_2491519_2 Belongs to the sulfate adenylyltransferase family K00958 - 2.7.7.4 0.0000000000000000000000000000000000000000000000000000000000000000000000000008261 260.0
DYD1_k127_2491519_3 Catalyzes the transfer of a ribosyl phosphate group from 5-phosphoribose 1-diphosphate to orotate, leading to the formation of orotidine monophosphate (OMP) K00762 - 2.4.2.10 0.00000000000000000000000000000000000000000000000000000000000000000000000005226 254.0
DYD1_k127_2491519_4 - - - - 0.000000000000004225 87.0
DYD1_k127_2495000_0 NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient K00333 - 1.6.5.3 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006845 331.0
DYD1_k127_2495000_1 NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient K00331 - 1.6.5.3 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008657 312.0
DYD1_k127_2495000_2 NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient K00332 - 1.6.5.3 0.00000000000000000000000000000000000000000000000000000000000000000000000008978 259.0
DYD1_k127_2528102_0 Binding-protein-dependent transport system inner membrane component K02033,K15585 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002092 495.0
DYD1_k127_2528102_1 Binding-protein-dependent transport system inner membrane component K02034 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000735 429.0
DYD1_k127_2528102_2 HMGL-like K01640 GO:0003674,GO:0003824,GO:0004419,GO:0005488,GO:0016829,GO:0016830,GO:0016833,GO:0043167,GO:0043169,GO:0046872 4.1.3.4 0.0000000000000000000000000000000003388 138.0
DYD1_k127_2528102_3 PFAM pyruvate carboxyltransferase K01640 - 4.1.3.4 0.00002208 49.0
DYD1_k127_2611678_0 Catalyzes the interconversion between ADP-D-glycero- beta-D-manno-heptose and ADP-L-glycero-beta-D-manno-heptose via an epimerization at carbon 6 of the heptose K03274 - 5.1.3.20 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007246 417.0
DYD1_k127_2611678_1 Glycosyltransferase family 9 (heptosyltransferase) K02849 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002258 415.0
DYD1_k127_2611678_2 PFAM Three-deoxy-D-manno-octulosonic-acid transferase K02527 - 2.4.99.12,2.4.99.13,2.4.99.14,2.4.99.15 0.000000000000000000000000000000000000000000000000000000000000000002701 237.0
DYD1_k127_2611678_3 Catalyzes the ATP-dependent phosphorylation of the 3- deoxy-D-manno-octulosonic acid (Kdo) residue in Kdo-lipid IV(A) at the 4-OH position K11211 - 2.7.1.166 0.0000000000000000000000000000000000000000000000000000000001784 211.0
DYD1_k127_2611678_4 - - - - 0.0000000000000000000000000000000000000006937 162.0
DYD1_k127_2626153_0 Cytochrome c-type biogenesis protein K02198 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001871 469.0
DYD1_k127_2626153_1 Presumably involved in the processing and regular turnover of intracellular proteins. Catalyzes the removal of unsubstituted N-terminal amino acids from various peptides K01255 - 3.4.11.1 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008812 464.0
DYD1_k127_2626153_2 Permease YjgP YjgQ K11720 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000403 261.0
DYD1_k127_2626153_3 permease YjgP YjgQ family K07091 - - 0.0000000000000000000000000000000000000000000000000000000000009576 223.0
DYD1_k127_2626712_0 Polysaccharide biosynthesis protein - - - 0.0000000000000000000000000000000000000000000000000000000000000002676 223.0
DYD1_k127_2626712_1 Glycosyl transferase family 2 K12984 - - 0.000000000000000000000000000000000000000000000000000006984 205.0
DYD1_k127_2626712_2 3-demethylubiquinone-9 3-O-methyltransferase activity - - - 0.0000000000000002278 91.0
DYD1_k127_2627330_0 Part of a heterotetrameric complex that catalyzes the two-step biosynthesis of anthranilate, an intermediate in the biosynthesis of L-tryptophan. In the first step, the glutamine- binding beta subunit (TrpG) of anthranilate synthase (AS) provides the glutamine amidotransferase activity which generates ammonia as a substrate that, along with chorismate, is used in the second step, catalyzed by the large alpha subunit of AS (TrpE) to produce anthranilate. In the absence of TrpG, TrpE can synthesize anthranilate directly from chorismate and high concentrations of ammonia K01657 - 4.1.3.27 2.795e-213 672.0
DYD1_k127_2627330_1 HAD-hyrolase-like K01091 - 3.1.3.18 0.000000000000000000000000000000000000000000000000000000000000000000000000000007586 266.0
DYD1_k127_2627330_2 PD-(D/E)XK nuclease superfamily - - - 0.0000000000000000000000000000000000000000001203 163.0
DYD1_k127_2627330_3 TIGRFAM glutamine amidotransferase of anthranilate synthase K01658 - 4.1.3.27 0.000000000000000000007817 92.0
DYD1_k127_2627330_4 Belongs to the ribulose-phosphate 3-epimerase family K01783 - 5.1.3.1 0.00000000000000077 77.0
DYD1_k127_2662796_0 cellulose binding - - - 2.21e-213 666.0
DYD1_k127_2662796_1 Involved in sulfur transfer in the conversion of molybdopterin precursor Z to molybdopterin - - - 0.00000000000000000000000000000000000007616 149.0
DYD1_k127_2663083_0 Phosphoribosylformylglycinamidine synthase involved in the purines biosynthetic pathway. Catalyzes the ATP-dependent conversion of formylglycinamide ribonucleotide (FGAR) and glutamine to yield formylglycinamidine ribonucleotide (FGAM) and glutamate K01952 - 6.3.5.3 0.0 1384.0
DYD1_k127_2663083_1 Molecular chaperone. Has ATPase activity K04079 - - 1.105e-276 863.0
DYD1_k127_2663083_10 - - - - 0.00000004357 61.0
DYD1_k127_2663083_2 ABC transporter transmembrane region K06147 - - 1.478e-250 786.0
DYD1_k127_2663083_3 cytochrome C peroxidase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005406 543.0
DYD1_k127_2663083_4 Belongs to the ABC transporter superfamily K02010 - 3.6.3.30 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007214 440.0
DYD1_k127_2663083_5 PFAM Succinylglutamate desuccinylase Aspartoacylase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003832 403.0
DYD1_k127_2663083_6 PFAM EAL domain K21025 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002661 338.0
DYD1_k127_2663083_7 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain K00611 GO:0000050,GO:0003674,GO:0003824,GO:0004585,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006082,GO:0006520,GO:0006525,GO:0006526,GO:0006591,GO:0006807,GO:0008150,GO:0008152,GO:0008652,GO:0009058,GO:0009064,GO:0009084,GO:0009987,GO:0016053,GO:0016740,GO:0016741,GO:0016743,GO:0019627,GO:0019752,GO:0034641,GO:0042450,GO:0043436,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0044283,GO:0044424,GO:0044464,GO:0046394,GO:0071704,GO:0071941,GO:1901564,GO:1901566,GO:1901576,GO:1901605,GO:1901607 2.1.3.3 0.00000000000000000000000000000000000000001518 154.0
DYD1_k127_2663083_8 Soluble lytic murein transglycosylase and related regulatory proteins (some contain LysM invasin domains) - - - 0.000000000000000000000000000000000000005452 153.0
DYD1_k127_2663338_0 cellulose binding - - - 1.282e-222 694.0
DYD1_k127_2663338_1 Protein conserved in bacteria - - - 0.0000000000000000000000000000000000000000000000000000000000000006932 222.0
DYD1_k127_2663338_2 Involved in sulfur transfer in the conversion of molybdopterin precursor Z to molybdopterin - - - 0.00000000001422 70.0
DYD1_k127_2663338_3 3-demethylubiquinone-9 3-methyltransferase - - - 0.0000924 48.0
DYD1_k127_2667751_0 tRNA-splicing ligase RtcB K14415 - 6.5.1.3 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004472 399.0
DYD1_k127_2667751_1 Radical SAM superfamily K04069 - 1.97.1.4 0.000000000000000000000000000000000000000000000000000001294 192.0
DYD1_k127_2667751_2 PFAM Archease protein family (DUF101 UPF0211) K00974 - 2.7.7.72 0.00000000000000000000000000000000000000000000000004759 182.0
DYD1_k127_2702717_0 Isocitrate/isopropylmalate dehydrogenase K07246 - 1.1.1.83,1.1.1.93,4.1.1.73 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001323 571.0
DYD1_k127_2702717_1 COG0697 Permeases of the drug metabolite transporter (DMT) superfamily - - - 0.000000000000000000000000000000000000000000000000000000437 202.0
DYD1_k127_2702717_2 Domain of unknown function (DUF1932) K00020 - 1.1.1.31 0.000000000000000000000000000000000000000000000009528 178.0
DYD1_k127_2710357_0 Oligopeptide transport system permease protein OppB K02033 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008455 482.0
DYD1_k127_2710357_1 Extracellular solute-binding protein, family 5 - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001625 411.0
DYD1_k127_2710357_2 PFAM binding-protein-dependent transport systems inner membrane component K02034 - - 0.0000000000000000000000003048 109.0
DYD1_k127_2713226_0 Transcriptional regulator - - - 0.000000000000000000000000000000000000000000000000006566 184.0
DYD1_k127_2713226_1 COG0604 NADPH quinone reductase and related Zn-dependent oxidoreductases K00344 - 1.6.5.5 0.0000000000000000000000000000000000000000000000003129 180.0
DYD1_k127_2713226_2 conserved small protein - - - 0.000000005411 63.0
DYD1_k127_2724099_0 Protein of unknown function, DUF255 K06888 - - 4.828e-249 788.0
DYD1_k127_2724099_1 STAS domain K03321 - - 2.134e-198 635.0
DYD1_k127_2724099_2 PFAM Lytic K08309 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008797 447.0
DYD1_k127_2724099_3 Catalyzes the addition and repair of the essential 3'- terminal CCA sequence in tRNAs without using a nucleic acid template. Adds these three nucleotides in the order of C, C, and A to the tRNA nucleotide-73, using CTP and ATP as substrates and producing inorganic pyrophosphate. Also shows phosphatase, 2'- nucleotidase and 2',3'-cyclic phosphodiesterase activities. These phosphohydrolase activities are probably involved in the repair of the tRNA 3'-CCA terminus degraded by intracellular RNases K00974 - 2.7.7.72 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001915 379.0
DYD1_k127_2724099_4 NAD-dependent epimerase dehydratase K00329,K00356 - 1.6.5.3,1.6.99.3 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008026 364.0
DYD1_k127_2724099_5 Transfers the N-acyl diglyceride group on what will become the N-terminal cysteine of membrane lipoproteins K13292 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008616 357.0
DYD1_k127_2724099_6 Putative aminopeptidase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002175 351.0
DYD1_k127_2724099_7 4-amino-4-deoxy-L-arabinose transferase activity - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000004794 287.0
DYD1_k127_2724099_8 The glycine cleavage system catalyzes the degradation of glycine. The P protein binds the alpha-amino group of glycine through its pyridoxal phosphate cofactor K00283 - 1.4.4.2 0.000000000000000000000000000000000000000001152 157.0
DYD1_k127_2724099_9 Recycling of diacylglycerol produced during the turnover of membrane phospholipid K00901 - 2.7.1.107 0.00000000000000000000000000000001337 128.0
DYD1_k127_2733977_0 ABC-2 type transporter K09694 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003378 341.0
DYD1_k127_2733977_1 Domain of unknown function (DUF2437) - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000002337 293.0
DYD1_k127_2733977_2 Uncharacterised protein family (UPF0093) K08973 - - 0.00000000000000000000000000000000000000000000000000000000000000000001591 235.0
DYD1_k127_2733977_3 Belongs to the methyltransferase superfamily K07444 - - 0.00000000000003265 76.0
DYD1_k127_2737839_0 Bacterial periplasmic substrate-binding proteins K18691 GO:0005575,GO:0005623,GO:0009279,GO:0016020,GO:0019867,GO:0030312,GO:0030313,GO:0031975,GO:0044462,GO:0044464,GO:0071944 - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000215 518.0
DYD1_k127_2742160_0 Belongs to the malate synthase family K01638 - 2.3.3.9 4.039e-227 715.0
DYD1_k127_2742160_1 4Fe-4S dicluster domain K11473 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000531 526.0
DYD1_k127_2757487_0 COG4206 Outer membrane cobalamin receptor protein K16092 GO:0003674,GO:0005215,GO:0005216,GO:0005488,GO:0005515,GO:0005575,GO:0006810,GO:0006811,GO:0008150,GO:0015075,GO:0015267,GO:0015318,GO:0015889,GO:0015893,GO:0016020,GO:0016021,GO:0019904,GO:0022803,GO:0022838,GO:0022857,GO:0031224,GO:0034220,GO:0042221,GO:0042493,GO:0044425,GO:0050896,GO:0051179,GO:0051180,GO:0051181,GO:0051234,GO:0055085,GO:0071702,GO:0071705 - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001675 544.0
DYD1_k127_2778573_0 Catalyzes the reversible interconversion of isobutyryl- CoA and n-butyryl-CoA, using radical chemistry. Also exhibits GTPase activity, associated with its G-protein domain (MeaI) that functions as a chaperone that assists cofactor delivery and proper holo-enzyme assembly K11942 - 5.4.99.13 8.356e-216 683.0
DYD1_k127_2778573_1 COG1960 Acyl-CoA dehydrogenases K00253 - 1.3.8.4 1.026e-202 642.0
DYD1_k127_2778573_2 protein, possibly involved in aromatic compounds catabolism - - - 0.00000000000000000000000000000000000000000000000001173 184.0
DYD1_k127_2778573_3 helix_turn_helix, mercury resistance - - - 0.000000000000000000000000000000000000001378 151.0
DYD1_k127_2782400_0 Is probably a protein kinase regulator of UbiI activity which is involved in aerobic coenzyme Q (ubiquinone) biosynthesis K03688 - - 1.335e-200 639.0
DYD1_k127_2782400_1 phosphate transporter K03306 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004643 527.0
DYD1_k127_2782400_10 COG4942 Membrane-bound metallopeptidase - GO:0000920,GO:0001896,GO:0003674,GO:0003824,GO:0005575,GO:0005623,GO:0005886,GO:0008150,GO:0008219,GO:0009273,GO:0009314,GO:0009628,GO:0009987,GO:0012501,GO:0016020,GO:0016787,GO:0030288,GO:0030313,GO:0031975,GO:0032153,GO:0042221,GO:0042493,GO:0042546,GO:0042597,GO:0043085,GO:0044085,GO:0044093,GO:0044464,GO:0050790,GO:0050896,GO:0051301,GO:0051336,GO:0051345,GO:0065007,GO:0065009,GO:0071554,GO:0071840,GO:0071944 - 0.000000000000000000000000000000000000000000000000000000000000000000000000000005477 276.0
DYD1_k127_2782400_11 Protein of unknown function DUF47 K07220 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000009548 261.0
DYD1_k127_2782400_12 helix_turn_helix, Lux Regulon - - - 0.00000000000000000000000000000000000000000000000000000000000000137 225.0
DYD1_k127_2782400_13 protein conserved in bacteria K09798 - - 0.0000000000000000000000000000000000000000000000000000000003067 214.0
DYD1_k127_2782400_14 Protein of unknown function (DUF971) - - - 0.0000000000000000000000000000000000000000000000000000002704 196.0
DYD1_k127_2782400_15 Sterol-binding domain protein K03690 - - 0.000000000000000000000000000000000007108 145.0
DYD1_k127_2782400_16 One of the proteins required for the normal export of preproteins out of the cell cytoplasm. It is a molecular chaperone that binds to a subset of precursor proteins, maintaining them in a translocation-competent state. It also specifically binds to its receptor SecA K03071 - - 0.0000000000000000000000000000000002522 140.0
DYD1_k127_2782400_17 regulatory protein, arsR - - - 0.000000000000000000000000000000000531 133.0
DYD1_k127_2782400_18 Rhodanese Homology Domain - - - 0.000000000000000000000000000001453 126.0
DYD1_k127_2782400_19 Histidine kinase K07675 - 2.7.13.3 0.000000000000000000000000000001538 124.0
DYD1_k127_2782400_2 Diguanylate cyclase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006889 535.0
DYD1_k127_2782400_20 diguanylate cyclase - - - 0.00000000000000005448 92.0
DYD1_k127_2782400_3 Belongs to the peptidase S41A family K03797 - 3.4.21.102 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004482 516.0
DYD1_k127_2782400_4 Belongs to the ALAD family K01698 - 4.2.1.24 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004777 504.0
DYD1_k127_2782400_5 GGDEF domain containing protein - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007868 408.0
DYD1_k127_2782400_6 Glycerol-3-phosphate dehydrogenase K00057 - 1.1.1.94 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004631 346.0
DYD1_k127_2782400_7 Methyltransferase required for the conversion of demethylmenaquinol (DMKH2) to menaquinol (MKH2) and the conversion of 2-polyprenyl-6-methoxy-1,4-benzoquinol (DDMQH2) to 2- polyprenyl-3-methyl-6-methoxy-1,4-benzoquinol (DMQH2) K03183 - 2.1.1.163,2.1.1.201 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001585 329.0
DYD1_k127_2782400_8 Catalyzes the phosphorylation of D-fructose 6-phosphate, the first committing step of glycolysis. Uses inorganic phosphate (PPi) as phosphoryl donor instead of ATP like common ATP-dependent phosphofructokinases (ATP-PFKs), which renders the reaction reversible, and can thus function both in glycolysis and gluconeogenesis. Consistently, PPi-PFK can replace the enzymes of both the forward (ATP-PFK) and reverse (fructose-bisphosphatase (FBPase)) reactions K21071 - 2.7.1.11,2.7.1.90 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000001974 277.0
DYD1_k127_2782400_9 Catalyzes the reversible transfer of the terminal phosphate group between ATP and AMP. Plays an important role in cellular energy homeostasis and in adenine nucleotide metabolism K00939 - 2.7.4.3 0.0000000000000000000000000000000000000000000000000000000000000000000000000000002749 274.0
DYD1_k127_2790477_0 - - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000003682 254.0
DYD1_k127_2790477_1 - - - - 0.00000000000000000000000000000000000000000005722 166.0
DYD1_k127_2790477_2 MotA/TolQ/ExbB proton channel family - - - 0.00000000000000000000000000000000000000001397 167.0
DYD1_k127_2790477_3 COG1028 Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) - - - 0.00000000000000000000000000000000006335 134.0
DYD1_k127_2790477_4 Trk system potassium uptake protein K03498 - - 0.00000000000000000000000000000006249 125.0
DYD1_k127_2825312_0 Adenylyl- / guanylyl cyclase, catalytic domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004015 539.0
DYD1_k127_2825312_1 Protein-L-isoaspartate(D-aspartate) O-methyltransferase (PCMT) - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000243 440.0
DYD1_k127_2825312_10 - - - - 0.0000000000000000000000000000000000000000000000008434 182.0
DYD1_k127_2825312_11 Toxic component of a toxin-antitoxin (TA) module. An RNase - - - 0.000000000000000000000000000000000000000000008879 166.0
DYD1_k127_2825312_12 PFAM Patatin K07001 - - 0.00000000000000000000000000000000000007848 162.0
DYD1_k127_2825312_13 3-carboxymuconate cyclase quinoprotein amine dehydrogenase, beta chain-like - - - 0.00000000000000000000000000000000006678 154.0
DYD1_k127_2825312_14 Protein of unknown function (DUF433) - - - 0.000000000000000000000006286 102.0
DYD1_k127_2825312_15 - - - - 0.000000000000000000003973 95.0
DYD1_k127_2825312_16 COG3170 Tfp pilus assembly protein FimV K08086 - - 0.0000000000000000002405 104.0
DYD1_k127_2825312_17 Belongs to the 'phage' integrase family - - - 0.0000000000000000003175 103.0
DYD1_k127_2825312_18 Protein-L-isoaspartate(D-aspartate) O-methyltransferase (PCMT) - - - 0.000000000000000001267 89.0
DYD1_k127_2825312_19 - - - - 0.00000000000002333 76.0
DYD1_k127_2825312_2 Zinc-binding dehydrogenase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006531 421.0
DYD1_k127_2825312_21 belongs to the aldehyde dehydrogenase family K00128,K00130 - 1.2.1.3,1.2.1.8 0.00000000001644 67.0
DYD1_k127_2825312_22 pilus assembly protein FimV K08086 - - 0.00000002799 67.0
DYD1_k127_2825312_23 TolA C-terminal K03646 - - 0.00000003851 60.0
DYD1_k127_2825312_24 NAD ADP-ribosyltransferase activity. It is involved in the biological process described with protein ADP-ribosylation K10798 GO:0000002,GO:0000003,GO:0000122,GO:0000166,GO:0000228,GO:0000302,GO:0000303,GO:0000305,GO:0000715,GO:0000723,GO:0000724,GO:0000725,GO:0000785,GO:0000790,GO:0000791,GO:0000976,GO:0000977,GO:0000981,GO:0001012,GO:0001067,GO:0001228,GO:0001817,GO:0001818,GO:0002009,GO:0002064,GO:0002065,GO:0002066,GO:0002225,GO:0002376,GO:0002520,GO:0002521,GO:0002573,GO:0002682,GO:0002684,GO:0002697,GO:0002699,GO:0002700,GO:0002702,GO:0002759,GO:0002760,GO:0002784,GO:0002786,GO:0002791,GO:0002792,GO:0002803,GO:0002805,GO:0002807,GO:0002808,GO:0002831,GO:0002833,GO:0002920,GO:0002922,GO:0003002,GO:0003006,GO:0003254,GO:0003674,GO:0003676,GO:0003677,GO:0003682,GO:0003690,GO:0003700,GO:0003824,GO:0003909,GO:0003910,GO:0003950,GO:0005102,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005634,GO:0005635,GO:0005654,GO:0005667,GO:0005694,GO:0005700,GO:0005703,GO:0005719,GO:0005730,GO:0005737,GO:0005739,GO:0006139,GO:0006140,GO:0006163,GO:0006259,GO:0006260,GO:0006261,GO:0006266,GO:0006271,GO:0006273,GO:0006281,GO:0006282,GO:0006284,GO:0006289,GO:0006293,GO:0006294,GO:0006296,GO:0006302,GO:0006310,GO:0006351,GO:0006355,GO:0006357,GO:0006366,GO:0006464,GO:0006471,GO:0006508,GO:0006725,GO:0006753,GO:0006793,GO:0006796,GO:0006807,GO:0006915,GO:0006950,GO:0006952,GO:0006955,GO:0006963,GO:0006974,GO:0006979,GO:0006996,GO:0006997,GO:0007000,GO:0007005,GO:0007154,GO:0007163,GO:0007165,GO:0007166,GO:0007167,GO:0007178,GO:0007179,GO:0007275,GO:0007276,GO:0007281,GO:0007292,GO:0007389,GO:0007552,GO:0007610,GO:0008069,GO:0008104,GO:0008134,GO:0008150,GO:0008152,GO:0008219,GO:0009058,GO:0009059,GO:0009117,GO:0009123,GO:0009126,GO:0009141,GO:0009144,GO:0009150,GO:0009161,GO:0009167,GO:0009199,GO:0009205,GO:0009259,GO:0009266,GO:0009303,GO:0009314,GO:0009408,GO:0009410,GO:0009411,GO:0009416,GO:0009628,GO:0009653,GO:0009719,GO:0009725,GO:0009798,GO:0009888,GO:0009889,GO:0009890,GO:0009891,GO:0009892,GO:0009893,GO:0009950,GO:0009953,GO:0009966,GO:0009967,GO:0009987,GO:0010033,GO:0010035,GO:0010038,GO:0010043,GO:0010212,GO:0010243,GO:0010332,GO:0010467,GO:0010468,GO:0010556,GO:0010557,GO:0010558,GO:0010563,GO:0010604,GO:0010605,GO:0010611,GO:0010613,GO:0010628,GO:0010629,GO:0010639,GO:0010646,GO:0010647,GO:0010941,GO:0010942,GO:0010990,GO:0012501,GO:0012505,GO:0014070,GO:0014742,GO:0014743,GO:0015030,GO:0016043,GO:0016070,GO:0016072,GO:0016333,GO:0016334,GO:0016485,GO:0016540,GO:0016604,GO:0016740,GO:0016757,GO:0016763,GO:0016874,GO:0016886,GO:0017144,GO:0018130,GO:0018193,GO:0018209,GO:0018312,GO:0019219,GO:0019220,GO:0019222,GO:0019438,GO:0019538,GO:0019637,GO:0019693,GO:0019899,GO:0019900,GO:0019901,GO:0019953,GO:0022412,GO:0022414,GO:0022607,GO:0022616,GO:0023019,GO:0023051,GO:0023052,GO:0023056,GO:0030097,GO:0030099,GO:0030154,GO:0030225,GO:0030331,GO:0030534,GO:0030575,GO:0030576,GO:0030707,GO:0030808,GO:0030809,GO:0030855,GO:0031323,GO:0031324,GO:0031325,GO:0031326,GO:0031327,GO:0031328,GO:0031334,GO:0031347,GO:0031349,GO:0031960,GO:0031967,GO:0031974,GO:0031975,GO:0031981,GO:0032042,GO:0032101,GO:0032103,GO:0032200,GO:0032204,GO:0032205,GO:0032501,GO:0032502,GO:0032504,GO:0032507,GO:0032660,GO:0032700,GO:0032774,GO:0032868,GO:0032869,GO:0032870,GO:0032879,GO:0032880,GO:0032991,GO:0032993,GO:0033036,GO:0033043,GO:0033044,GO:0033143,GO:0033145,GO:0033146,GO:0033148,GO:0033365,GO:0033554,GO:0033683,GO:0033993,GO:0034248,GO:0034250,GO:0034504,GO:0034599,GO:0034605,GO:0034613,GO:0034614,GO:0034622,GO:0034641,GO:0034644,GO:0034645,GO:0034654,GO:0034660,GO:0035079,GO:0035080,GO:0035257,GO:0035258,GO:0035363,GO:0036094,GO:0036211,GO:0040008,GO:0040009,GO:0042220,GO:0042221,GO:0042391,GO:0042393,GO:0042493,GO:0042592,GO:0042769,GO:0042802,GO:0042826,GO:0042981,GO:0043067,GO:0043170,GO:0043226,GO:0043227,GO:0043228,GO:0043229,GO:0043231,GO:0043232,GO:0043233,GO:0043254,GO:0043279,GO:0043388,GO:0043412,GO:0043434,GO:0043484,GO:0043502,GO:0043504,GO:0043523,GO:0043565,GO:0043900,GO:0043902,GO:0043933,GO:0044030,GO:0044057,GO:0044085,GO:0044087,GO:0044089,GO:0044093,GO:0044212,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044281,GO:0044422,GO:0044424,GO:0044427,GO:0044428,GO:0044444,GO:0044446,GO:0044451,GO:0044454,GO:0044464,GO:0044703,GO:0045087,GO:0045185,GO:0045595,GO:0045597,GO:0045739,GO:0045892,GO:0045893,GO:0045934,GO:0045935,GO:0045936,GO:0045944,GO:0045980,GO:0046034,GO:0046332,GO:0046483,GO:0047485,GO:0048037,GO:0048148,GO:0048468,GO:0048477,GO:0048513,GO:0048518,GO:0048519,GO:0048522,GO:0048523,GO:0048534,GO:0048545,GO:0048583,GO:0048584,GO:0048609,GO:0048729,GO:0048731,GO:0048856,GO:0048869,GO:0048878,GO:0050662,GO:0050707,GO:0050708,GO:0050709,GO:0050710,GO:0050776,GO:0050778,GO:0050789,GO:0050790,GO:0050793,GO:0050794,GO:0050801,GO:0050879,GO:0050881,GO:0050882,GO:0050896,GO:0051046,GO:0051048,GO:0051049,GO:0051051,GO:0051052,GO:0051053,GO:0051054,GO:0051094,GO:0051098,GO:0051099,GO:0051101,GO:0051103,GO:0051128,GO:0051129,GO:0051130,GO:0051171,GO:0051172,GO:0051173,GO:0051174,GO:0051179,GO:0051223,GO:0051224,GO:0051235,GO:0051239,GO:0051240,GO:0051241,GO:0051252,GO:0051253,GO:0051254,GO:0051276,GO:0051287,GO:0051385,GO:0051427,GO:0051457,GO:0051604,GO:0051606,GO:0051641,GO:0051651,GO:0051704,GO:0051716,GO:0051881,GO:0051900,GO:0051901,GO:0055086,GO:0060249,GO:0060255,GO:0060341,GO:0060359,GO:0060390,GO:0060391,GO:0060429,GO:0062012,GO:0062014,GO:0065003,GO:0065004,GO:0065007,GO:0065008,GO:0065009,GO:0070013,GO:0070201,GO:0070212,GO:0070412,GO:0070727,GO:0070848,GO:0070887,GO:0070911,GO:0071214,GO:0071241,GO:0071248,GO:0071294,GO:0071310,GO:0071363,GO:0071375,GO:0071417,GO:0071450,GO:0071451,GO:0071478,GO:0071482,GO:0071495,GO:0071559,GO:0071560,GO:0071704,GO:0071824,GO:0071840,GO:0072347,GO:0072521,GO:0072595,GO:0080090,GO:0080134,GO:0080135,GO:0090087,GO:0090092,GO:0090100,GO:0090257,GO:0090304,GO:0090305,GO:0097159,GO:0097305,GO:0097659,GO:0098687,GO:0098781,GO:0104004,GO:0140096,GO:0140097,GO:0140110,GO:1900180,GO:1900182,GO:1900371,GO:1900372,GO:1900407,GO:1900424,GO:1900426,GO:1900542,GO:1900543,GO:1901135,GO:1901214,GO:1901216,GO:1901265,GO:1901360,GO:1901362,GO:1901363,GO:1901564,GO:1901576,GO:1901652,GO:1901653,GO:1901654,GO:1901698,GO:1901699,GO:1901700,GO:1901701,GO:1902175,GO:1902531,GO:1902679,GO:1902680,GO:1902882,GO:1903201,GO:1903203,GO:1903376,GO:1903506,GO:1903507,GO:1903508,GO:1903516,GO:1903518,GO:1903530,GO:1903531,GO:1903578,GO:1903579,GO:1903827,GO:1903829,GO:1904044,GO:1904181,GO:1904356,GO:1904357,GO:1904645,GO:1904646,GO:1904760,GO:1904762,GO:1904950,GO:1905076,GO:1905077,GO:1990404,GO:1990837,GO:1990966,GO:2000112,GO:2000113,GO:2000677,GO:2000679,GO:2001020,GO:2001022,GO:2001141,GO:2001169,GO:2001170,GO:2001233,GO:2001242,GO:2001251 2.4.2.30 0.0000001547 60.0
DYD1_k127_2825312_25 PFAM Patatin K07001 - - 0.0000003262 52.0
DYD1_k127_2825312_3 PFAM ADP-ribosylation Crystallin J1 - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001027 383.0
DYD1_k127_2825312_4 EamA-like transporter family - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007322 381.0
DYD1_k127_2825312_5 Putative 2OG-Fe(II) oxygenase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000008477 286.0
DYD1_k127_2825312_6 Mycolic acid cyclopropane synthetase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000004676 282.0
DYD1_k127_2825312_7 Plasmid pRiA4b ORF-3-like protein - - - 0.0000000000000000000000000000000000000000000000000000000000000001699 226.0
DYD1_k127_2825312_8 - - - - 0.00000000000000000000000000000000000000000000000000498 187.0
DYD1_k127_2825312_9 von Willebrand factor (vWF) type A domain K07114 - - 0.0000000000000000000000000000000000000000000000005058 198.0
DYD1_k127_2830510_0 PFAM peptidase K04774 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005567 383.0
DYD1_k127_2830510_1 PFAM Short-chain dehydrogenase reductase SDR - - - 0.000000000000000000000000000000000000000000000000000000000000001285 225.0
DYD1_k127_2830510_2 - - - - 0.0000000000000000000000000000000000000000007908 163.0
DYD1_k127_2830510_3 Ion channel - - - 0.00000000000000005406 82.0
DYD1_k127_2838395_0 Catalyzes the conversion of glucosamine-6-phosphate to glucosamine-1-phosphate K03431 - 5.4.2.10 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004269 442.0
DYD1_k127_2838395_1 Involved in the gluconeogenesis. Catalyzes stereospecifically the conversion of dihydroxyacetone phosphate (DHAP) to D-glyceraldehyde-3-phosphate (G3P) K01803 - 5.3.1.1 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000149 309.0
DYD1_k127_2838395_2 PFAM Preprotein translocase SecG subunit K03075 - - 0.00000000000000000001592 96.0
DYD1_k127_2842303_0 Bacterial NAD-glutamate dehydrogenase K15371 - 1.4.1.2 1.402e-297 931.0
DYD1_k127_2842303_1 Belongs to the binding-protein-dependent transport system permease family K01997 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007624 448.0
DYD1_k127_2842303_2 Belongs to the binding-protein-dependent transport system permease family K01998 - - 0.00001608 50.0
DYD1_k127_2844635_0 Pyridoxal-phosphate dependent enzyme K01697 - 4.2.1.22 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007637 478.0
DYD1_k127_2844635_1 Catalyzes the formation of L-homocysteine from O- succinyl-L-homoserine (OSHS) and hydrogen sulfide - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000003856 285.0
DYD1_k127_2844635_2 Aminotransferase class-III K00823,K03918,K20428 - 2.6.1.19,2.6.1.33,2.6.1.36 0.000000000000000000000000000000000000000000000000000000000000000000000005985 260.0
DYD1_k127_2856919_0 ATP binding to DnaK triggers the release of the substrate protein, thus completing the reaction cycle. Several rounds of ATP-dependent interactions between DnaJ, DnaK and GrpE are required for fully efficient folding. Also involved, together with DnaK and GrpE, in the DNA replication of plasmids through activation of initiation proteins K03686 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002627 383.0
DYD1_k127_2856919_1 COG3385 FOG Transposase and inactivated derivatives - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002121 339.0
DYD1_k127_2885025_0 PFAM Nitrile hydratase alpha K01721,K20762 - 3.5.5.8,4.2.1.84 0.0000000000000000000000000000000000000000000000000000000000000000000007961 246.0
DYD1_k127_2885025_1 Nitrile hydratase beta subunit K20807 - 4.2.1.84 0.000000000000000000000000000000000003878 140.0
DYD1_k127_2885025_2 protein conserved in bacteria - - - 0.0000000000000000000000002607 108.0
DYD1_k127_2885025_3 Nitrile hydratase beta subunit K20807 - 4.2.1.84 0.0000000000000003255 84.0
DYD1_k127_2885025_4 Probable cobalt transporter subunit (CbtA) - - - 0.00000006636 55.0
DYD1_k127_2927958_0 EamA-like transporter family - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000002144 272.0
DYD1_k127_2927958_1 LysE type translocator - - - 0.0000000000000000000000000000000000000000000000003996 181.0
DYD1_k127_2927958_2 Phosphoglycerate mutase family - - - 0.00000000000000000000000000000000007442 141.0
DYD1_k127_2927958_3 LysE type translocator - - - 0.000000000000000002917 86.0
DYD1_k127_2938638_0 Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family K18138 - - 0.0 1312.0
DYD1_k127_2938638_1 Iron-containing alcohol dehydrogenase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001646 488.0
DYD1_k127_2938638_10 Bacterial regulatory proteins, tetR family - - - 0.0000000000000000000000000000000000000000000005453 173.0
DYD1_k127_2938638_11 Could be a mediator in iron transactions between iron acquisition and iron-requiring processes, such as synthesis and or repair of Fe-S clusters in biosynthetic enzymes - - - 0.000000000000000000000000000000000000000352 151.0
DYD1_k127_2938638_12 Thiamine biosynthesis protein K03154 - - 0.000000000000006144 76.0
DYD1_k127_2938638_13 PFAM VanZ - - - 0.0000000002816 67.0
DYD1_k127_2938638_14 EamA-like transporter family - - - 0.0000000004347 63.0
DYD1_k127_2938638_16 Resolvase - - - 0.0000006355 52.0
DYD1_k127_2938638_2 Key enzyme in the regulation of glycerol uptake and metabolism. Catalyzes the phosphorylation of glycerol to yield sn- glycerol 3-phosphate K00864 - 2.7.1.30 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001821 427.0
DYD1_k127_2938638_3 TIGRFAM A G-specific adenine glycosylase K03575 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002675 395.0
DYD1_k127_2938638_4 PFAM AsmA family protein K07289 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001513 391.0
DYD1_k127_2938638_5 Barrel-sandwich domain of CusB or HlyD membrane-fusion K03585 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000001414 293.0
DYD1_k127_2938638_6 Inositol monophosphatase family K01082 - 3.1.3.7 0.000000000000000000000000000000000000000000000000000000000001326 214.0
DYD1_k127_2938638_7 Catalyzes the rearrangement of 1-deoxy-D-xylulose 5- phosphate (DXP) to produce the thiazole phosphate moiety of thiamine. Sulfur is provided by the thiocarboxylate moiety of the carrier protein ThiS. In vitro, sulfur can be provided by H(2)S K03149 - 2.8.1.10 0.0000000000000000000000000000000000000000000000000000000008449 204.0
DYD1_k127_2938638_8 PFAM Glycerophosphoryl diester phosphodiesterase K01126 - 3.1.4.46 0.0000000000000000000000000000000000000000000000000000001275 204.0
DYD1_k127_2938638_9 PFAM Phage integrase family K07358 - - 0.000000000000000000000000000000000000000000000000000000616 199.0
DYD1_k127_2938768_0 Required for disulfide bond formation in some periplasmic proteins. Acts by transferring its disulfide bond to other proteins and is reduced in the process K03981 - 5.3.4.1 0.000000000000000000000000000000000000000000000000000000000000000002714 234.0
DYD1_k127_2938768_1 Adenylyl cyclase class-3 4 guanylyl cyclase K01768 - 4.6.1.1 0.0000000000001565 72.0
DYD1_k127_2950180_0 Amino Acid - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007875 376.0
DYD1_k127_2950180_1 Domain in cystathionine beta-synthase and other proteins. - - - 0.0000000000000000000000000000000000000000002578 162.0
DYD1_k127_2957740_0 Enoyl-CoA hydratase/isomerase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000005731 248.0
DYD1_k127_2957740_1 Transcriptional regulator - - - 0.0000000000000000000000000000000000000000000000000001988 193.0
DYD1_k127_2957740_2 urea carboxylase K01941 - 6.3.4.6 0.0000001382 55.0
DYD1_k127_3006347_0 Belongs to the binding-protein-dependent transport system permease family K01998 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002394 508.0
DYD1_k127_3006347_1 COG0411 ABC-type branched-chain amino acid transport systems, ATPase component K01995 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001136 421.0
DYD1_k127_3006347_2 branched-chain amino acid K01996 - - 0.0000000000000000000000000000000000002161 143.0
DYD1_k127_3011010_0 Phosphoenolpyruvate carboxykinase - - - 8.978e-219 687.0
DYD1_k127_3011010_1 Major Facilitator Superfamily - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000775 480.0
DYD1_k127_3011010_2 Tetratricopeptide repeat - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009802 377.0
DYD1_k127_3011010_3 Tpr repeat-containing protein - - - 0.0000000000000000000000000000000000000000000000000000000000000001404 237.0
DYD1_k127_3011010_4 Methyltransferase domain - - - 0.0000000000000000000000000000000005931 142.0
DYD1_k127_3011010_5 2OG-Fe(II) oxygenase superfamily - - - 0.00000000000002688 74.0
DYD1_k127_3011010_6 repeat-containing protein - - - 0.00000000172 60.0
DYD1_k127_3032897_0 MAATS-type transcriptional repressor, C-terminal region K03577 GO:0003674,GO:0003676,GO:0003677,GO:0003700,GO:0005488,GO:0006139,GO:0006351,GO:0006355,GO:0006725,GO:0006807,GO:0008144,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009889,GO:0009890,GO:0009892,GO:0009987,GO:0010467,GO:0010468,GO:0010556,GO:0010558,GO:0010605,GO:0010629,GO:0016070,GO:0018130,GO:0019219,GO:0019222,GO:0019438,GO:0031323,GO:0031324,GO:0031326,GO:0031327,GO:0032774,GO:0034641,GO:0034645,GO:0034654,GO:0042221,GO:0042493,GO:0043170,GO:0043565,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044271,GO:0045892,GO:0045934,GO:0046483,GO:0048519,GO:0048523,GO:0050789,GO:0050794,GO:0050896,GO:0051171,GO:0051172,GO:0051252,GO:0051253,GO:0060255,GO:0065007,GO:0071704,GO:0080090,GO:0090304,GO:0097159,GO:0097659,GO:0140110,GO:1901360,GO:1901362,GO:1901363,GO:1901576,GO:1902679,GO:1903506,GO:1903507,GO:2000112,GO:2000113,GO:2001141 - 0.00000000000000000000000000000000000000000000000000004449 196.0
DYD1_k127_3032897_1 Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family K03585 - - 0.0000000000000000000003664 100.0
DYD1_k127_3036163_0 Belongs to the citrate synthase family K01647,K01659 - 2.3.3.1,2.3.3.5 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004497 571.0
DYD1_k127_3036163_1 Catalyzes the formation of acetyl phosphate from acetate and ATP. Can also catalyze the reverse reaction K00925 - 2.7.2.1 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006631 505.0
DYD1_k127_3036163_2 phosphate acetyltransferase K00625 - 2.3.1.8 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001994 362.0
DYD1_k127_3036163_3 Belongs to the GMC oxidoreductase family K00108 - 1.1.99.1 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005993 358.0
DYD1_k127_3036163_4 protein methyltransferase activity K00568,K02687 - 2.1.1.222,2.1.1.64 0.00000000000000000000002394 110.0
DYD1_k127_3036163_5 carbamoyl transferase, NodU family K00612 - - 0.0000000000000000001416 91.0
DYD1_k127_3036163_6 Methyltransferase domain - - - 0.0000000000000003006 91.0
DYD1_k127_306901_0 Belongs to the thiolase family K00626 - 2.3.1.9 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002574 571.0
DYD1_k127_306901_1 Ammonium transporter K03320 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004719 569.0
DYD1_k127_306901_2 Catalyzes the reversible oxidation of malate to oxaloacetate K00024 - 1.1.1.37 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005764 465.0
DYD1_k127_306901_3 Metallo-beta-lactamase superfamily - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001377 372.0
DYD1_k127_306901_4 - - - - 0.00000000000000000000000001312 117.0
DYD1_k127_306901_5 Catalyzes the aldol cleavage of 4-hydroxy-4-methyl-2- oxoglutarate (HMG) into 2 molecules of pyruvate. Also contains a secondary oxaloacetate (OAA) decarboxylase activity due to the common pyruvate enolate transition state formed following C-C bond cleavage in the retro-aldol and decarboxylation reactions K02553 GO:0003674,GO:0003824,GO:0006732,GO:0008150,GO:0008152,GO:0008168,GO:0008757,GO:0009058,GO:0009108,GO:0009233,GO:0009234,GO:0009987,GO:0016740,GO:0016741,GO:0032259,GO:0042180,GO:0042181,GO:0044237,GO:0044249,GO:0044281,GO:0044283,GO:0051186,GO:0051188,GO:0071704,GO:1901576,GO:1901661,GO:1901663 - 0.000000000000000000000282 103.0
DYD1_k127_306901_6 Inactivates the type B streptogramin antibiotics by linearizing the lactone ring at the ester linkage, generating a free phenylglycine carboxylate and converting the threonyl moiety into 2-amino-butenoic acid K18235 - - 0.00000000000000000005351 94.0
DYD1_k127_306901_7 Catalyzes the aldol cleavage of 4-hydroxy-4-methyl-2- oxoglutarate (HMG) into 2 molecules of pyruvate. Also contains a secondary oxaloacetate (OAA) decarboxylase activity due to the common pyruvate enolate transition state formed following C-C bond cleavage in the retro-aldol and decarboxylation reactions K02553 - - 0.00000000000000008817 81.0
DYD1_k127_3094320_0 response regulator receiver K02487,K06596 - - 2.727e-291 961.0
DYD1_k127_3094320_1 TIGRFAM dihydroorotase, multifunctional complex type K01465 - 3.5.2.3 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002577 554.0
DYD1_k127_3094320_10 Could be a nuclease involved in processing of the 5'-end of pre-16S rRNA K07447 GO:0000966,GO:0000967,GO:0003674,GO:0003824,GO:0004518,GO:0004527,GO:0004529,GO:0004536,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006139,GO:0006259,GO:0006364,GO:0006396,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0008296,GO:0008408,GO:0009987,GO:0010467,GO:0016070,GO:0016072,GO:0016787,GO:0016788,GO:0016796,GO:0016895,GO:0022613,GO:0034470,GO:0034471,GO:0034641,GO:0034660,GO:0042254,GO:0043170,GO:0044085,GO:0044237,GO:0044238,GO:0044260,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0071704,GO:0071840,GO:0090304,GO:0090305,GO:0140097,GO:1901360 - 0.0000000000000000000000000000008881 133.0
DYD1_k127_3094320_11 Chemotaxis signal transduction protein K02659 - - 0.000000000000000000000000000001036 132.0
DYD1_k127_3094320_12 SnoaL-like domain - - - 0.000000000000000000003039 98.0
DYD1_k127_3094320_13 - - - - 0.0000000000000000009854 96.0
DYD1_k127_3094320_14 - - - - 0.000000009802 61.0
DYD1_k127_3094320_15 chemotaxis signal transduction protein K06598 - - 0.00000008592 59.0
DYD1_k127_3094320_2 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain K00609 - 2.1.3.2 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006386 472.0
DYD1_k127_3094320_3 COG0840 Methyl-accepting chemotaxis protein K02660 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006035 441.0
DYD1_k127_3094320_4 Catalyzes the transfer of the alpha-amino group from S- adenosyl-L-methionine (SAM) to 7-keto-8-aminopelargonic acid (KAPA) to form 7,8-diaminopelargonic acid (DAPA). It is the only animotransferase known to utilize SAM as an amino donor K00833 GO:0003674,GO:0003824,GO:0004015,GO:0005488,GO:0006082,GO:0006732,GO:0006766,GO:0006767,GO:0006768,GO:0006790,GO:0006807,GO:0008144,GO:0008150,GO:0008152,GO:0008483,GO:0009058,GO:0009102,GO:0009108,GO:0009110,GO:0009987,GO:0016053,GO:0016740,GO:0016769,GO:0017144,GO:0018130,GO:0019752,GO:0019842,GO:0030170,GO:0032787,GO:0034641,GO:0036094,GO:0042364,GO:0043167,GO:0043168,GO:0043436,GO:0043603,GO:0043604,GO:0044237,GO:0044249,GO:0044271,GO:0044272,GO:0044281,GO:0044283,GO:0046394,GO:0046483,GO:0048037,GO:0050662,GO:0051186,GO:0051188,GO:0070279,GO:0071704,GO:0072330,GO:0097159,GO:1901360,GO:1901362,GO:1901363,GO:1901564,GO:1901566,GO:1901576 2.6.1.62 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003454 327.0
DYD1_k127_3094320_5 Belongs to the UPF0301 (AlgH) family K07735 - - 0.00000000000000000000000000000000000000000000000000000000000000000000001576 251.0
DYD1_k127_3094320_6 phosphoribosyltransferase K02825 - 2.4.2.9 0.000000000000000000000000000000000000000000000000000000000001471 215.0
DYD1_k127_3094320_7 Periplasmic protein TonB links inner and outer membranes K03832 - - 0.0000000000000000000000000000000000000000000000000001901 197.0
DYD1_k127_3094320_8 response regulator K02657 - - 0.00000000000000000000000000000000000000000000000000127 184.0
DYD1_k127_3094320_9 RESPONSE REGULATOR receiver K02658 - - 0.00000000000000000000000000000000000000000000000006707 179.0
DYD1_k127_3113029_0 hydrolase (HAD superfamily) K20881 GO:0000287,GO:0003674,GO:0003824,GO:0005488,GO:0006793,GO:0006796,GO:0008150,GO:0008152,GO:0008252,GO:0008253,GO:0008477,GO:0009987,GO:0016311,GO:0016787,GO:0016788,GO:0016791,GO:0016798,GO:0016799,GO:0030145,GO:0042578,GO:0043167,GO:0043169,GO:0044237,GO:0046872,GO:0046914,GO:0050483,GO:0050484 3.1.3.5 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000003213 283.0
DYD1_k127_3113029_1 TIGRFAM 3'(2'),5'-bisphosphate nucleotidase K01082 - 3.1.3.7 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000007624 283.0
DYD1_k127_3113029_2 (ABC) transporter - - - 0.00000000000000000000000000000000000000000000000000000000000000241 224.0
DYD1_k127_3113029_3 SpoIIAA-like - - - 0.00000000000000000000000000000009554 127.0
DYD1_k127_3146165_0 3'-5' exoribonuclease that releases 5'-nucleoside monophosphates and is involved in maturation of structured RNAs K12573 - - 6.728e-264 833.0
DYD1_k127_3146165_1 it exhibits DNA-dependent ATPase activity and contains distinct active sites for ATP binding, DNA binding, and interaction with DnaC protein, primase, and other prepriming proteins K02314 - 3.6.4.12 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000612 597.0
DYD1_k127_3146165_2 Plays an important role in the de novo pathway of purine nucleotide biosynthesis. Catalyzes the first committed step in the biosynthesis of AMP from IMP K01939 - 6.3.4.4 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001061 578.0
DYD1_k127_3146165_3 Catalyzes the interconversion of L-alanine and D- alanine. May also act on other amino acids K01775 - 5.1.1.1 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004322 393.0
DYD1_k127_3146165_4 DNA-dependent ATPase involved in processing of recombination intermediates, plays a role in repairing DNA breaks. Stimulates the branch migration of RecA-mediated strand transfer reactions, allowing the 3' invading strand to extend heteroduplex DNA faster. Binds ssDNA in the presence of ADP but not other nucleotides, has ATPase activity that is stimulated by ssDNA and various branched DNA structures, but inhibited by SSB. Does not have RecA's homology-searching function K04485 GO:0000725,GO:0003674,GO:0003676,GO:0003677,GO:0003697,GO:0003824,GO:0005488,GO:0006139,GO:0006259,GO:0006281,GO:0006310,GO:0006725,GO:0006807,GO:0006950,GO:0006974,GO:0008094,GO:0008150,GO:0008152,GO:0009314,GO:0009628,GO:0009987,GO:0016462,GO:0016787,GO:0016817,GO:0016818,GO:0016887,GO:0017111,GO:0033554,GO:0034641,GO:0042623,GO:0043170,GO:0044237,GO:0044238,GO:0044260,GO:0046483,GO:0050896,GO:0051716,GO:0071704,GO:0090304,GO:0097159,GO:1901360,GO:1901363 - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006632 305.0
DYD1_k127_3146165_5 Specifically methylates the ribose of guanosine 2251 in 23S rRNA K03218 - 2.1.1.185 0.00000000000000000000000000000000000000000000000000000000000000000000002252 251.0
DYD1_k127_3146165_6 Binds together with S18 to 16S ribosomal RNA K02990 - - 0.00000000000000000000000000000000000000000000184 172.0
DYD1_k127_3146165_7 binds to the 23S rRNA K02939 - - 0.000000000000000000000000000000000000001305 158.0
DYD1_k127_3146165_8 Binds as a heterodimer with protein S6 to the central domain of the 16S rRNA, where it helps stabilize the platform of the 30S subunit K02963 - - 0.000000000000000000000000000002201 124.0
DYD1_k127_3188291_0 Adenylyl- / guanylyl cyclase, catalytic domain - - - 7.06e-225 732.0
DYD1_k127_3188291_1 Rhodanese Homology Domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001167 619.0
DYD1_k127_3188291_2 PFAM type III effector Hrp-dependent outers K21948 - 2.7.1.217 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001081 522.0
DYD1_k127_3188291_3 COG2031 Short chain fatty acids transporter K02106 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001354 460.0
DYD1_k127_3188291_4 membrane protein (homolog of Drosophila rhomboid) - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000003376 281.0
DYD1_k127_3188291_5 Cysteine dioxygenase type I - - - 0.0000000000000000000000000000000000000000000000000000001918 202.0
DYD1_k127_3188291_6 Helix-turn-helix XRE-family like proteins - - - 0.0000000000000000000000000000004559 124.0
DYD1_k127_3188291_7 - - - - 0.0000000000000000000000001343 110.0
DYD1_k127_3188291_8 - - - - 0.00000000000008247 77.0
DYD1_k127_3188291_9 PFAM type III effector Hrp-dependent outers K21948 - 2.7.1.217 0.00000000001265 64.0
DYD1_k127_3212780_0 Produces ATP from ADP in the presence of a proton gradient across the membrane. The alpha chain is a regulatory subunit K02111 - 3.6.3.14 1.063e-263 819.0
DYD1_k127_3212780_1 Produces ATP from ADP in the presence of a proton gradient across the membrane. The gamma chain is believed to be important in regulating ATPase activity and the flow of protons through the CF(0) complex K02115 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008374 346.0
DYD1_k127_3212780_2 it plays a direct role in the translocation of protons across the membrane K02108 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001035 340.0
DYD1_k127_3212780_3 F(1)F(0) ATP synthase produces ATP from ADP in the presence of a proton or sodium gradient. F-type ATPases consist of two structural domains, F(1) containing the extramembraneous catalytic core and F(0) containing the membrane proton channel, linked together by a central stalk and a peripheral stalk. During catalysis, ATP synthesis in the catalytic domain of F(1) is coupled via a rotary mechanism of the central stalk subunits to proton translocation K02113 GO:0003674,GO:0003824,GO:0005215,GO:0005575,GO:0005622,GO:0005623,GO:0005886,GO:0006139,GO:0006163,GO:0006164,GO:0006725,GO:0006753,GO:0006754,GO:0006793,GO:0006796,GO:0006807,GO:0006810,GO:0006811,GO:0006812,GO:0008150,GO:0008152,GO:0008324,GO:0009058,GO:0009117,GO:0009123,GO:0009124,GO:0009126,GO:0009127,GO:0009141,GO:0009142,GO:0009144,GO:0009145,GO:0009150,GO:0009152,GO:0009156,GO:0009161,GO:0009165,GO:0009167,GO:0009168,GO:0009199,GO:0009201,GO:0009205,GO:0009206,GO:0009259,GO:0009260,GO:0009987,GO:0015075,GO:0015077,GO:0015078,GO:0015318,GO:0015399,GO:0015405,GO:0015672,GO:0015985,GO:0015986,GO:0016020,GO:0016462,GO:0016469,GO:0016787,GO:0016817,GO:0016818,GO:0016887,GO:0017111,GO:0017144,GO:0018130,GO:0019438,GO:0019637,GO:0019693,GO:0019829,GO:0022804,GO:0022853,GO:0022857,GO:0022890,GO:0032991,GO:0033178,GO:0034220,GO:0034641,GO:0034654,GO:0036442,GO:0042623,GO:0042625,GO:0042626,GO:0043492,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0044424,GO:0044425,GO:0044459,GO:0044464,GO:0044769,GO:0045259,GO:0045260,GO:0045261,GO:0045262,GO:0046034,GO:0046390,GO:0046483,GO:0046933,GO:0046961,GO:0051179,GO:0051234,GO:0055085,GO:0055086,GO:0071704,GO:0071944,GO:0072521,GO:0072522,GO:0090407,GO:0090662,GO:0098655,GO:0098660,GO:0098662,GO:0098796,GO:0098797,GO:0099131,GO:0099132,GO:1901135,GO:1901137,GO:1901293,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576,GO:1902600 - 0.000000000000000000000000000000000000000000866 163.0
DYD1_k127_3212780_4 Component of the F(0) channel, it forms part of the peripheral stalk, linking F(1) to F(0) K02109 - - 0.00000000000000000000000000000000000000004272 161.0
DYD1_k127_3212780_5 F(1)F(0) ATP synthase produces ATP from ADP in the presence of a proton or sodium gradient. F-type ATPases consist of two structural domains, F(1) containing the extramembraneous catalytic core and F(0) containing the membrane proton channel, linked together by a central stalk and a peripheral stalk. During catalysis, ATP synthesis in the catalytic domain of F(1) is coupled via a rotary mechanism of the central stalk subunits to proton translocation K02110 - - 0.000000000000000000000000000004381 121.0
DYD1_k127_3221747_0 Transport permease protein K09688 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000002349 261.0
DYD1_k127_3221747_1 SMART ATPase, AAA type, core K09689 - 3.6.3.38 0.0000000000000000000000000000000000000000000000000001634 189.0
DYD1_k127_3221747_2 Transposase - - - 0.0000000000000000000000000000002755 130.0
DYD1_k127_3221747_3 DDE superfamily endonuclease - - - 0.00000000000001077 80.0
DYD1_k127_3242673_0 4Fe-4S dicluster domain - - - 3.845e-245 766.0
DYD1_k127_3243247_0 One of the primary rRNA binding proteins, it binds directly near the 3'-end of the 23S rRNA, where it nucleates assembly of the 50S subunit K02906 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008196 316.0
DYD1_k127_3243247_1 50S ribosomal protein L4 K02926 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000003078 291.0
DYD1_k127_3243247_2 One of the early assembly proteins it binds 23S rRNA. One of the proteins that surrounds the polypeptide exit tunnel on the outside of the ribosome. Forms the main docking site for trigger factor binding to the ribosome K02892 - - 0.00000000000000000000000000000003093 138.0
DYD1_k127_3243247_3 Involved in the binding of tRNA to the ribosomes K02946 - - 0.000000000000000000000000000002671 119.0
DYD1_k127_3243247_4 One of the primary rRNA binding proteins. Required for association of the 30S and 50S subunits to form the 70S ribosome, for tRNA binding and peptide bond formation. It has been suggested to have peptidyltransferase activity K02886 - - 0.0000000000000000001938 95.0
DYD1_k127_3286896_0 General Secretion Pathway protein K02453 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002311 466.0
DYD1_k127_3286896_1 Type II secretion system (T2SS), protein E, N-terminal domain K02454 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000006252 254.0
DYD1_k127_3304140_0 Belongs to the class-I aminoacyl-tRNA synthetase family K01869 - 6.1.1.4 0.0 1229.0
DYD1_k127_3304140_1 Transfers the fatty acyl group on membrane lipoproteins K03820 - - 0.00000000000000000000000000000000000000000000000000000000000000000003886 239.0
DYD1_k127_3306854_0 Belongs to the IlvD Edd family K01687 - 4.2.1.9 4.318e-253 790.0
DYD1_k127_3306854_1 Receptor family ligand binding region K01999 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004903 565.0
DYD1_k127_3306854_10 Calcineurin-like phosphoesterase superfamily domain - - - 0.000000000000000000000000000000000000000000000000008775 192.0
DYD1_k127_3306854_11 Belongs to the peptidase M20A family. ArgE subfamily K01438 - 3.5.1.16 0.0000000000000000000000002679 109.0
DYD1_k127_3306854_12 antibiotic biosynthesis - - - 0.00000000000000001034 86.0
DYD1_k127_3306854_13 membrane transporter protein K07090 - - 0.0007365 43.0
DYD1_k127_3306854_2 Mandelate racemase / muconate lactonizing enzyme, C-terminal domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000112 549.0
DYD1_k127_3306854_3 Branched-chain amino acid transport system / permease component K01998 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001047 482.0
DYD1_k127_3306854_4 Branched-chain amino acid transport system / permease component K01997 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004787 453.0
DYD1_k127_3306854_5 ATPases associated with a variety of cellular activities K01995 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001099 392.0
DYD1_k127_3306854_6 ATPases associated with a variety of cellular activities K01996 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008861 374.0
DYD1_k127_3306854_7 DSBA-like thioredoxin domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000002792 271.0
DYD1_k127_3306854_8 Carboxylesterase family K01432 - 3.5.1.9 0.000000000000000000000000000000000000000000000000000000000000000000000001983 254.0
DYD1_k127_3306854_9 Belongs to the MsrB Met sulfoxide reductase family K07305 - 1.8.4.12 0.0000000000000000000000000000000000000000000000000000001807 197.0
DYD1_k127_330856_0 Flavin prenyltransferase that catalyzes the synthesis of the prenylated FMN cofactor (prenyl-FMN) for 4-hydroxy-3- polyprenylbenzoic acid decarboxylase UbiD. The prenyltransferase is metal-independent and links a dimethylallyl moiety from dimethylallyl monophosphate (DMAP) to the flavin N5 and C6 atoms of FMN K03186 - 2.5.1.129 0.0000000000000000000000000000000000000000000000000000000000000000000000000001599 263.0
DYD1_k127_330856_1 Tripartite tricarboxylate transporter family receptor - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000005896 266.0
DYD1_k127_330856_2 Thioesterase superfamily - - - 0.0000000000000000000000000000000000000000000000000000553 190.0
DYD1_k127_330856_3 Transcriptional regulator - - - 0.00000000000000000000000000000000000002476 161.0
DYD1_k127_330856_4 PFAM AMP-dependent synthetase and ligase - - - 0.00000000000000000007025 90.0
DYD1_k127_3319503_0 OsmC-like protein K06889,K07397 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002214 460.0
DYD1_k127_3319503_1 Ring cyclization and eight-electron oxidation of 3a-(2- amino-2-carboxyethyl)-4,5-dioxo-4,5,6,7,8,9-hexahydroquinoline- 7,9-dicarboxylic-acid to PQQ - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001226 438.0
DYD1_k127_3319503_10 Ankyrin repeat - - - 0.000000000000006716 83.0
DYD1_k127_3319503_11 AsmA-like C-terminal region K07290 - - 0.0000000003565 74.0
DYD1_k127_3319503_2 Fumarylacetoacetate (FAA) hydrolase family K16171 - 3.7.1.2 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007319 318.0
DYD1_k127_3319503_3 LysR substrate binding domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000037 296.0
DYD1_k127_3319503_4 PFAM Phosphatidylethanolamine-binding protein K06910 - - 0.000000000000000000000000000000000000000000000000000000000000000000000001482 247.0
DYD1_k127_3319503_5 PFAM DoxX family protein K15977 - - 0.00000000000000000000000000000000000000000000004076 174.0
DYD1_k127_3319503_6 protein involved in outer membrane biogenesis K07290 GO:0005575,GO:0005623,GO:0005886,GO:0008150,GO:0016020,GO:0032386,GO:0032879,GO:0032880,GO:0033157,GO:0044464,GO:0050789,GO:0051049,GO:0051223,GO:0060341,GO:0065007,GO:0070201,GO:0071944,GO:0090087,GO:0090313,GO:1903533,GO:1903827,GO:1905475 - 0.0000000000000000000000000000008167 142.0
DYD1_k127_3319503_7 AsmA family K07289,K07290 - - 0.0000000000000000000000000000008405 134.0
DYD1_k127_3319503_8 Tetratricopeptide repeat - - - 0.0000000000000000000000000001357 126.0
DYD1_k127_3319503_9 SPTR PIN domain protein like protein - - - 0.0000000000000000000000002686 109.0
DYD1_k127_3326999_0 protein conserved in bacteria - - - 0.00000000000000000000000000000000000000000000000000000000000001033 229.0
DYD1_k127_3326999_1 Alpha beta hydrolase - - - 0.0000000000000000000000000000000000000000001609 159.0
DYD1_k127_3326999_2 2-methylcitrate dehydratase K01720 - 4.2.1.79 0.000000000000000000000000000000000758 132.0
DYD1_k127_336611_0 Sulphur transport K07112 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003406 359.0
DYD1_k127_336611_1 - - - - 0.00000000000000000000000000000000000000000000000000000000000000001204 228.0
DYD1_k127_336611_2 - - - - 0.00000000000000000000000000000000000000000000000000003399 195.0
DYD1_k127_336611_3 Domain of unknown function DUF302 - - - 0.00000000000000000000000000000000000001532 153.0
DYD1_k127_336611_4 Antibiotic biosynthesis monooxygenase - - - 0.00000000000000278 81.0
DYD1_k127_346651_0 PFAM amidohydrolase K07045 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002315 561.0
DYD1_k127_346651_1 aminotransferase K00813,K00832 GO:0003674,GO:0003824,GO:0004069,GO:0004838,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006082,GO:0006520,GO:0006558,GO:0006725,GO:0006807,GO:0008144,GO:0008150,GO:0008152,GO:0008483,GO:0008652,GO:0009058,GO:0009072,GO:0009073,GO:0009094,GO:0009095,GO:0009987,GO:0016053,GO:0016740,GO:0016769,GO:0017144,GO:0019438,GO:0019752,GO:0019842,GO:0030170,GO:0033585,GO:0036094,GO:0042802,GO:0043167,GO:0043168,GO:0043436,GO:0043648,GO:0044237,GO:0044238,GO:0044249,GO:0044281,GO:0044283,GO:0044424,GO:0044444,GO:0044464,GO:0046394,GO:0046417,GO:0048037,GO:0050662,GO:0070279,GO:0070547,GO:0071704,GO:0097159,GO:1901360,GO:1901362,GO:1901363,GO:1901564,GO:1901566,GO:1901576,GO:1901605,GO:1901607,GO:1902221,GO:1902223 2.6.1.1,2.6.1.57 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009375 473.0
DYD1_k127_346651_2 photosynthesis - - - 0.000000000000000000000000000000000000000004341 162.0
DYD1_k127_346651_3 Glutathione S-transferase K00799 - 2.5.1.18 0.000000000000000008443 84.0
DYD1_k127_3507438_0 glutamate-cysteine ligase activity - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001546 481.0
DYD1_k127_3507438_1 The glycine cleavage system catalyzes the degradation of glycine K00605 - 2.1.2.10 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000005112 276.0
DYD1_k127_3507438_2 HAD-hyrolase-like K01560 - 3.8.1.2 0.0000000000000000000000000000000000000000000000000000000000000000000008624 243.0
DYD1_k127_3507438_3 protein localization to T-tubule K10380 - - 0.0000000000000000000000000000000000005106 149.0
DYD1_k127_3507438_4 NACHT domain - - - 0.00000000000000000000441 107.0
DYD1_k127_3511658_0 Domain of unknown function (DUF4139) - - - 4.242e-194 617.0
DYD1_k127_3511658_1 PFAM ABC-2 type transporter K01992 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007219 460.0
DYD1_k127_3511658_2 PFAM ABC transporter K01990 - - 0.000000000000000000000000000000000000000000000000000001002 196.0
DYD1_k127_3511658_3 Beta-lactamase superfamily domain - - - 0.00000000000000000000000000005997 129.0
DYD1_k127_3511658_4 Cysteine-rich CPXCG - - - 0.00000000000000001841 83.0
DYD1_k127_3511658_5 Protein tyrosine kinase K12132 - 2.7.11.1 0.0000000000001826 79.0
DYD1_k127_3511658_6 rho-dependent transcription termination K19000 GO:0006355,GO:0008150,GO:0009889,GO:0010468,GO:0010556,GO:0019219,GO:0019222,GO:0031323,GO:0031326,GO:0031554,GO:0031564,GO:0043244,GO:0050789,GO:0050794,GO:0051128,GO:0051171,GO:0051252,GO:0060255,GO:0065007,GO:0080090,GO:1903506,GO:2000112,GO:2001141 - 0.00000000001731 67.0
DYD1_k127_3511658_7 - - - - 0.00003313 52.0
DYD1_k127_3511658_8 Adenylate and Guanylate cyclase catalytic domain - - - 0.0001352 52.0
DYD1_k127_3516142_0 Type II secretion system (T2SS), protein E, N-terminal domain K02454,K12276 - - 1.695e-219 696.0
DYD1_k127_3516142_1 Type II secretion system (T2SS), protein F K02455,K12278 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002908 442.0
DYD1_k127_3516142_10 Prokaryotic N-terminal methylation motif K10926 - - 0.0000000000000000000000008212 109.0
DYD1_k127_3516142_11 domain, Protein - - - 0.00000000000000000000004019 117.0
DYD1_k127_3516142_12 Pilus assembly protein PilX K12286 - - 0.000000000000000000005283 98.0
DYD1_k127_3516142_13 HTH-like domain K07497 - - 0.000000000000000001799 85.0
DYD1_k127_3516142_14 Belongs to the sigma-70 factor family. ECF subfamily K03088 - - 0.0000000000003975 76.0
DYD1_k127_3516142_2 Polymer-forming cytoskeletal K12287 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004886 353.0
DYD1_k127_3516142_3 PFAM Fimbrial assembly family protein K12279 - - 0.00000000000000000000000000000000000000000000000000000000000000008275 234.0
DYD1_k127_3516142_4 Prokaryotic N-terminal methylation motif K12285 - - 0.000000000000000000000000000000000000000000000000000000001945 213.0
DYD1_k127_3516142_5 general secretion pathway protein K02456,K02457,K02458,K02650,K02679,K08084,K12285 - - 0.0000000000000000000000000000000000877 143.0
DYD1_k127_3516142_6 Involved in a type II secretion system (T2SS, formerly general secretion pathway, GSP) for the export of proteins K12280 - - 0.000000000000000000000000000000009361 143.0
DYD1_k127_3516142_7 Fimbrial assembly protein (PilN) - - - 0.00000000000000000000000000000001267 135.0
DYD1_k127_3516142_8 Prokaryotic N-terminal methylation motif K10924 - - 0.00000000000000000000000000000573 124.0
DYD1_k127_3516142_9 Pfam:N_methyl_2 K10927 - - 0.00000000000000000000000000005382 124.0
DYD1_k127_3517884_0 Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family - - - 0.0 1094.0
DYD1_k127_3517884_1 Sulfide dehydrogenase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005902 517.0
DYD1_k127_3517884_2 Histidine kinase K07637 - 2.7.13.3 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003171 372.0
DYD1_k127_3517884_3 HlyD family secretion protein - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000002209 274.0
DYD1_k127_3517884_4 cytochrome K17230 GO:0005575,GO:0005623,GO:0042597,GO:0044464 - 0.000000000000000726 78.0
DYD1_k127_3517884_5 .,Oxidizes proline to glutamate for use as a carbon and nitrogen source - - - 0.000000000000005759 76.0
DYD1_k127_3517884_6 PIN domain K07063 - - 0.0000000001614 70.0
DYD1_k127_3524802_0 MOSC domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000005859 297.0
DYD1_k127_3524802_1 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase K00042 - 1.1.1.60 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000723 288.0
DYD1_k127_3524802_2 Sigma-70, region 4 K03088 - - 0.0000000000000000000000000000000000000000000000287 177.0
DYD1_k127_3524802_3 Yhs domain-containing protein - - - 0.00000000000000000000000000000000000000134 152.0
DYD1_k127_3524802_4 Putative zinc-finger - - - 0.0003691 48.0
DYD1_k127_3530436_0 Cytochrome D1 heme domain - - - 3.705e-235 746.0
DYD1_k127_3530436_1 Pyridoxal-dependent decarboxylase conserved domain - - - 9.934e-213 674.0
DYD1_k127_3530436_2 Radical SAM superfamily K06139 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002352 331.0
DYD1_k127_3530436_3 DsrC like protein - - - 0.00000000000000000000000000000000000000001153 157.0
DYD1_k127_3530436_4 cog cog3189 - - - 0.00000000000000000000000000000000000004875 145.0
DYD1_k127_3530436_5 SNARE associated Golgi protein - - - 0.00000000000000000000000000000001846 135.0
DYD1_k127_3530436_6 Has a glutathione-disulfide oxidoreductase activity in the presence of NADPH and glutathione reductase. Reduces low molecular weight disulfides and proteins K03676 - - 0.00000000000000000000000007913 113.0
DYD1_k127_3547598_0 Major facilitator Superfamily - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007347 441.0
DYD1_k127_3547598_1 Predicted metal-binding integral membrane protein (DUF2182) - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000005352 262.0
DYD1_k127_3547598_10 PFAM Hypoxia induced protein conserved region - - - 0.0002036 47.0
DYD1_k127_3547598_2 YHS domain - - - 0.0000000000000000000000000000000000000000000000000008315 190.0
DYD1_k127_3547598_3 nuclease - - - 0.00000000000000000000000000000000000000000000001679 174.0
DYD1_k127_3547598_4 - - - - 0.00000000000000000000000000000000000000000000004604 177.0
DYD1_k127_3547598_5 PIN domain - - - 0.00000000000000000000000000000289 124.0
DYD1_k127_3547598_6 - - - - 0.0000000000000000000001921 103.0
DYD1_k127_3547598_7 High potential iron-sulfur protein - - - 0.00000000000000009718 83.0
DYD1_k127_3547598_8 Domain of unknown function (DUF4143) K07133 - - 0.00000003243 59.0
DYD1_k127_3568999_0 FtsX-like permease family K02004 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001422 572.0
DYD1_k127_3568999_1 Lipocalin-like domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007955 413.0
DYD1_k127_3568999_2 Protein of unknown function (DUF2860) - - - 0.0000000000000000000000000000000000000000000000000000000000000000000005349 251.0
DYD1_k127_3574523_0 Catalyzes the formation of phosphoribosylamine from phosphoribosylpyrophosphate (PRPP) and glutamine K00764 - 2.4.2.14 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003463 451.0
DYD1_k127_3574523_1 Component of the acetyl coenzyme A carboxylase (ACC) complex. Biotin carboxylase (BC) catalyzes the carboxylation of biotin on its carrier protein (BCCP) and then the CO(2) group is transferred by the transcarboxylase to acetyl-CoA to form malonyl- CoA K01963 - 2.1.3.15,6.4.1.2 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003685 424.0
DYD1_k127_3574523_2 Belongs to the folylpolyglutamate synthase family K11754 - 6.3.2.12,6.3.2.17 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001473 415.0
DYD1_k127_3574523_3 membrane protein, required for colicin V production K03558 GO:0005575,GO:0005623,GO:0005886,GO:0008150,GO:0008152,GO:0009058,GO:0009403,GO:0009404,GO:0009987,GO:0016020,GO:0019748,GO:0044237,GO:0044249,GO:0044464,GO:0044550,GO:0071944 - 0.00000000000000000000001627 106.0
DYD1_k127_3574523_4 protein conserved in bacteria K03749 - - 0.00000007473 62.0
DYD1_k127_3584628_0 The RuvA-RuvB complex in the presence of ATP renatures cruciform structure in supercoiled DNA with palindromic sequence, indicating that it may promote strand exchange reactions in homologous recombination. RuvAB is a helicase that mediates the Holliday junction migration by localized denaturation and reannealing K03551 - 3.6.4.12 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001041 492.0
DYD1_k127_3584628_1 MotA TolQ ExbB proton channel K03562 - - 0.000000000000000000000000000000000000000000000000000000000000004909 224.0
DYD1_k127_3584628_2 The RuvA-RuvB complex in the presence of ATP renatures cruciform structure in supercoiled DNA with palindromic sequence, indicating that it may promote strand exchange reactions in homologous recombination. RuvAB is a helicase that mediates the Holliday junction migration by localized denaturation and reannealing. RuvA stimulates, in the presence of DNA, the weak ATPase activity of RuvB K03550 - 3.6.4.12 0.0000000000000000000000000000000000000000000000000000000000001032 220.0
DYD1_k127_3584628_3 Tol-Pal system-associated acyl-CoA thioesterase K07107 - - 0.0000000000000000000000000000005242 126.0
DYD1_k127_3584628_4 Nuclease that resolves Holliday junction intermediates in genetic recombination. Cleaves the cruciform structure in supercoiled DNA by nicking to strands with the same polarity at sites symmetrically opposed at the junction in the homologous arms and leaves a 5'-terminal phosphate and a 3'-terminal hydroxyl group K01159 - 3.1.22.4 0.00000000000002944 73.0
DYD1_k127_358873_0 Releases the supercoiling and torsional tension of DNA, which is introduced during the DNA replication and transcription, by transiently cleaving and rejoining one strand of the DNA duplex. Introduces a single-strand break via transesterification at a target site in duplex DNA. The scissile phosphodiester is attacked by the catalytic tyrosine of the enzyme, resulting in the formation of a DNA-(5'-phosphotyrosyl)-enzyme intermediate and the expulsion of a 3'-OH DNA strand. The free DNA strand then undergoes passage around the unbroken strand, thus removing DNA supercoils. Finally, in the religation step, the DNA 3'-OH attacks the covalent intermediate to expel the active-site tyrosine and restore the DNA phosphodiester backbone K03168 GO:0003674,GO:0003824,GO:0003916,GO:0003917,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006139,GO:0006259,GO:0006265,GO:0006725,GO:0006807,GO:0006996,GO:0008150,GO:0008152,GO:0009987,GO:0016043,GO:0016853,GO:0034641,GO:0043170,GO:0044237,GO:0044238,GO:0044260,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0051276,GO:0071103,GO:0071704,GO:0071840,GO:0090304,GO:0140097,GO:1901360 5.99.1.2 0.0 1078.0
DYD1_k127_358873_1 TIGRFAM DNA protecting protein DprA K04096 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002812 368.0
DYD1_k127_358873_2 Attaches a formyl group to the free amino group of methionyl-tRNA(fMet). The formyl group appears to play a dual role in the initiator identity of N-formylmethionyl-tRNA by promoting its recognition by IF2 and preventing the misappropriation of this tRNA by the elongation apparatus K00604 - 2.1.2.9 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000526 294.0
DYD1_k127_358873_3 protein containing LysM domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000001346 265.0
DYD1_k127_358873_4 Removes the formyl group from the N-terminal Met of newly synthesized proteins. Requires at least a dipeptide for an efficient rate of reaction. N-terminal L-methionine is a prerequisite for activity but the enzyme has broad specificity at other positions K01462 - 3.5.1.88 0.00000000000000000000000000000000000000000000000000000000000000002833 226.0
DYD1_k127_358873_5 Belongs to the Smg family K03747 - - 0.000000000000000000000000000000000000000000001277 171.0
DYD1_k127_358873_6 Murein-degrading enzyme. May play a role in recycling of muropeptides during cell elongation and or cell division K08304 - - 0.00000000000000000000000000000000000000038 161.0
DYD1_k127_358873_7 Specifically methylates the cytosine at position 967 (m5C967) of 16S rRNA K03500 - 2.1.1.176 0.00000000000000000006107 98.0
DYD1_k127_3591318_0 Belongs to the FAD-dependent oxidoreductase 2 family. FRD SDH subfamily K00239 - 1.3.5.1,1.3.5.4 2.373e-288 900.0
DYD1_k127_3591318_1 Belongs to the succinate dehydrogenase fumarate reductase iron-sulfur protein family K00240 GO:0003674,GO:0003824,GO:0005488,GO:0005575,GO:0005623,GO:0005886,GO:0006091,GO:0008150,GO:0008152,GO:0009055,GO:0009060,GO:0009987,GO:0015980,GO:0016020,GO:0016491,GO:0022900,GO:0022904,GO:0044237,GO:0044464,GO:0045333,GO:0048037,GO:0051536,GO:0051537,GO:0051538,GO:0051539,GO:0051540,GO:0055114,GO:0071944 1.3.5.1,1.3.5.4 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003967 399.0
DYD1_k127_3591318_2 Belongs to the GcvT family K06980 - - 0.0000000000000000000000000000000000000000002718 169.0
DYD1_k127_3591318_3 TIGRFAM Succinate dehydrogenase, cytochrome b556 subunit K00241 - - 0.0000000000000000000000403 104.0
DYD1_k127_3591318_4 Succinate dehydrogenase hydrophobic membrane anchor K00242 - - 0.0000000000000000006022 93.0
DYD1_k127_3591318_5 Flavinator of succinate dehydrogenase K09159 - - 0.000000000003181 70.0
DYD1_k127_3609257_0 Aldehyde dehydrogenase family K00140 - 1.2.1.18,1.2.1.27 8.148e-242 755.0
DYD1_k127_3609257_1 Part of the ABC transporter complex TauABC involved in taurine import. Responsible for energy coupling to the transport system K10831 - 3.6.3.36 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007695 430.0
DYD1_k127_3609257_2 Substrate binding domain of ABC-type glycine betaine transport system K15551 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007613 433.0
DYD1_k127_3609257_3 Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family K00822 - 2.6.1.18 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006605 404.0
DYD1_k127_3609257_4 Binding-protein-dependent transport system inner membrane component K15552 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008082 392.0
DYD1_k127_3609257_5 Periplasmic binding protein domain K01999 - - 0.00000000000000000000000000000000000000000000000000000000000000000000005833 248.0
DYD1_k127_3609257_6 Catalyzes the condensation of pantoate with beta-alanine in an ATP-dependent reaction via a pantoyl-adenylate intermediate K01918 - 6.3.2.1 0.0000000000000000000000000000000000000000000000000000000000002089 223.0
DYD1_k127_3609257_7 - - - - 0.0000000000000000000000000000002788 126.0
DYD1_k127_3609257_8 Protein of unknown function (DUF433) - - - 0.00000000000000000000000008603 107.0
DYD1_k127_3627540_0 Alpha-amylase domain K01187 - 3.2.1.20 0.0 1583.0
DYD1_k127_3627540_1 Belongs to the glycosyl hydrolase 13 family K01214 - 3.2.1.68 0.0 1007.0
DYD1_k127_3627540_2 TIGRFAM malto-oligosyltrehalose trehalohydrolase K01236 - 3.2.1.141 1.054e-216 684.0
DYD1_k127_3627540_3 Maltosyltransferase that uses maltose 1-phosphate (M1P) as the sugar donor to elongate linear or branched alpha-(1- 4)- glucans. Is involved in a branched alpha-glucan biosynthetic pathway from trehalose, together with TreS, Mak and GlgB K16147 - 2.4.99.16 2.14e-215 672.0
DYD1_k127_366370_0 Cell division protein that is involved in the assembly of the Z ring. May serve as a membrane anchor for the Z ring K03590 - - 1.512e-200 631.0
DYD1_k127_366370_1 Belongs to the MurCDEF family K01924 - 6.3.2.8 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004152 582.0
DYD1_k127_366370_10 Catalyzes the addition of meso-diaminopimelic acid to the nucleotide precursor UDP-N-acetylmuramoyl-L-alanyl-D-glutamate (UMAG) in the biosynthesis of bacterial cell-wall peptidoglycan K01928 - 6.3.2.13 0.00000000000000000000000000000000000000000000000000000000000000000002742 239.0
DYD1_k127_366370_11 COG0739 Membrane proteins related to metalloendopeptidases - - - 0.0000000000000000000000000000000000000000000000000000000000000001733 232.0
DYD1_k127_366370_12 Essential cell division protein. May link together the upstream cell division proteins, which are predominantly cytoplasmic, with the downstream cell division proteins, which are predominantly periplasmic. May control correct divisome assembly K03589 - - 0.000000000000000000000000000000000006812 148.0
DYD1_k127_366370_2 First step of the lipid cycle reactions in the biosynthesis of the cell wall peptidoglycan K01000 GO:0000270,GO:0003674,GO:0003824,GO:0005575,GO:0006022,GO:0006023,GO:0006024,GO:0006807,GO:0008150,GO:0008152,GO:0008963,GO:0009058,GO:0009059,GO:0009252,GO:0009273,GO:0009987,GO:0016020,GO:0016740,GO:0016772,GO:0016780,GO:0030203,GO:0034645,GO:0042546,GO:0043170,GO:0044036,GO:0044038,GO:0044085,GO:0044237,GO:0044249,GO:0044260,GO:0070589,GO:0071554,GO:0071704,GO:0071840,GO:1901135,GO:1901137,GO:1901564,GO:1901566,GO:1901576 2.7.8.13 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001963 524.0
DYD1_k127_366370_3 Essential cell division protein that forms a contractile ring structure (Z ring) at the future cell division site. The regulation of the ring assembly controls the timing and the location of cell division. One of the functions of the FtsZ ring is to recruit other cell division proteins to the septum to produce a new cell wall between the dividing cells. Binds GTP and shows GTPase activity K03531 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008931 503.0
DYD1_k127_366370_4 Catalyzes the hydrolysis of UDP-3-O-myristoyl-N- acetylglucosamine to form UDP-3-O-myristoylglucosamine and acetate, the committed step in lipid A biosynthesis K02535 GO:0003674,GO:0003824,GO:0005488,GO:0005506,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005975,GO:0006629,GO:0006643,GO:0006644,GO:0006664,GO:0006793,GO:0006796,GO:0008150,GO:0008152,GO:0008270,GO:0008610,GO:0008654,GO:0008759,GO:0009058,GO:0009245,GO:0009247,GO:0009311,GO:0009312,GO:0009987,GO:0016051,GO:0016787,GO:0016810,GO:0016811,GO:0019213,GO:0019637,GO:0043167,GO:0043169,GO:0044237,GO:0044238,GO:0044249,GO:0044255,GO:0044424,GO:0044464,GO:0046467,GO:0046493,GO:0046872,GO:0046914,GO:0071704,GO:0090407,GO:1901135,GO:1901137,GO:1901269,GO:1901271,GO:1901576,GO:1903509 3.5.1.108 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001925 426.0
DYD1_k127_366370_5 Cell wall formation. Catalyzes the addition of glutamate to the nucleotide precursor UDP-N-acetylmuramoyl-L-alanine (UMA) K01925 - 6.3.2.9 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005581 428.0
DYD1_k127_366370_6 Involved in cell wall formation. Catalyzes the final step in the synthesis of UDP-N-acetylmuramoyl-pentapeptide, the precursor of murein K01929 - 6.3.2.10 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002385 410.0
DYD1_k127_366370_7 Peptidoglycan polymerase that is essential for cell division K03588 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001238 358.0
DYD1_k127_366370_8 Cell wall formation K00075 - 1.3.1.98 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004124 353.0
DYD1_k127_366370_9 Cell wall formation. Catalyzes the transfer of a GlcNAc subunit on undecaprenyl-pyrophosphoryl-MurNAc-pentapeptide (lipid intermediate I) to form undecaprenyl-pyrophosphoryl-MurNAc- (pentapeptide)GlcNAc (lipid intermediate II) K02563 - 2.4.1.227 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007627 355.0
DYD1_k127_376582_0 Catalyzes the formation of dTDP-glucose, from dTTP and glucose 1-phosphate, as well as its pyrophosphorolysis K00973 - 2.7.7.24 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001572 441.0
DYD1_k127_376582_1 Catalyzes the epimerization of the C3' and C5'positions of dTDP-6-deoxy-D-xylo-4-hexulose, forming dTDP-6-deoxy-L-lyxo-4- hexulose K01790 - 5.1.3.13 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000796 306.0
DYD1_k127_376582_2 Catalyzes the reduction of dTDP-6-deoxy-L-lyxo-4- hexulose to yield dTDP-L-rhamnose K00067 - 1.1.1.133 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002789 310.0
DYD1_k127_376582_3 Belongs to the NAD(P)-dependent epimerase dehydratase family. dTDP-glucose dehydratase subfamily K01710 - 4.2.1.46 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000559 304.0
DYD1_k127_376582_4 Catalyzes the reduction of dTDP-6-deoxy-L-lyxo-4- hexulose to yield dTDP-L-rhamnose K00067 - 1.1.1.133 0.000000000000000000000000000000000000000000000000000000000000000000000000002628 262.0
DYD1_k127_376582_5 Nucleotide binding protein, PINc - - - 0.0000000000000000000000000000007066 126.0
DYD1_k127_376582_6 - - - - 0.000000000000003214 79.0
DYD1_k127_3797134_0 His Kinase A (phosphoacceptor) domain - - - 0.0000000000000000000000000000000000000000000000000000000000002888 220.0
DYD1_k127_3797134_1 helix_turn_helix, Lux Regulon - - - 0.00000000000000000000000000000000000000000000000000000000005092 215.0
DYD1_k127_3797134_2 Transcriptional regulator K01420 - - 0.000000000000000000000000000000000000000000000000000003788 198.0
DYD1_k127_3797134_3 Belongs to the small heat shock protein (HSP20) family K13993 - - 0.00000000000000000000000000000000000000000000000000001162 195.0
DYD1_k127_3797134_4 helix_turn_helix, Lux Regulon - - - 0.0000000000000000000000002347 112.0
DYD1_k127_3797134_5 AAA domain - - - 0.0000000000000000000000002992 113.0
DYD1_k127_379833_0 Protein of unknown function (DUF933) K06942 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000164 475.0
DYD1_k127_379833_1 Involved in the biosynthesis of the central metabolite phospho-alpha-D-ribosyl-1-pyrophosphate (PRPP) via the transfer of pyrophosphoryl group from ATP to 1-hydroxyl of ribose-5-phosphate (Rib-5-P) K00948 - 2.7.6.1 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001594 463.0
DYD1_k127_379833_2 This is one of the proteins that binds to the 5S RNA in the ribosome where it forms part of the central protuberance K02897 - - 0.00000000000000000000000000000000000000000000000000000000002227 216.0
DYD1_k127_379833_3 The natural substrate for this enzyme may be peptidyl- tRNAs which drop off the ribosome during protein synthesis K01056 - 3.1.1.29 0.000000000000000000000000000000000000000000000000000000127 200.0
DYD1_k127_3807735_0 Catalyzes the formation of L-homocysteine from O- succinyl-L-homoserine (OSHS) and hydrogen sulfide K10764 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001205 553.0
DYD1_k127_3807735_1 Catalyzes the attachment of glutamate to tRNA(Glu) in a two-step reaction glutamate is first activated by ATP to form Glu-AMP and then transferred to the acceptor end of tRNA(Glu) K01885 - 6.1.1.17 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003628 504.0
DYD1_k127_3807735_2 pfam mofrl K11529 - 2.7.1.165 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000627 366.0
DYD1_k127_3807735_3 Catalyzes the formation of phosphoribosylamine from phosphoribosylpyrophosphate (PRPP) and glutamine K00764 - 2.4.2.14 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001078 330.0
DYD1_k127_3807735_4 Hydrolyzes the pyrophosphate bond of UDP-2,3- diacylglucosamine to yield 2,3-diacylglucosamine 1-phosphate (lipid X) and UMP by catalyzing the attack of water at the alpha-P atom. Involved in the biosynthesis of lipid A, a phosphorylated glycolipid that anchors the lipopolysaccharide to the outer membrane of the cell K03269 - 3.6.1.54 0.000000000000000000000000000000000000000000000000000000000000000000000006371 250.0
DYD1_k127_3807735_5 PPIases accelerate the folding of proteins. It catalyzes the cis-trans isomerization of proline imidic peptide bonds in oligopeptides K03768 - 5.2.1.8 0.00000000000000000000000000000000000000000000000000000000000004009 217.0
DYD1_k127_3807735_6 Belongs to the class-I aminoacyl-tRNA synthetase family K01883 - 6.1.1.16 0.0000000000000000000000000000000000000000000000000472 183.0
DYD1_k127_38359_0 Glutathione-dependent formaldehyde-activating enzyme - - - 0.0000000000000000000000000000000000000000000000000000000000000003165 222.0
DYD1_k127_38359_1 Alcohol dehydrogenase GroES-like domain K13953 - 1.1.1.1 0.000000000000000000000000000000000000000000000000000000000000001777 220.0
DYD1_k127_38359_2 Glutathione-dependent formaldehyde-activating enzyme - - - 0.000000000000000000000000000000000000000001884 160.0
DYD1_k127_38359_3 Acetyltransferase (GNAT) domain - - - 0.000000000000000000000000000009436 128.0
DYD1_k127_3851118_0 Couples transcription and DNA repair by recognizing RNA polymerase (RNAP) stalled at DNA lesions. Mediates ATP-dependent release of RNAP and its truncated transcript from the DNA, and recruitment of nucleotide excision repair machinery to the damaged site K03723 - - 0.0 1106.0
DYD1_k127_3851118_1 UTP-glucose-1-phosphate uridylyltransferase K00963 - 2.7.7.9 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001065 388.0
DYD1_k127_3851118_10 Peptidoglycan-binding protein, CsiV - - - 0.00000000000002245 83.0
DYD1_k127_3851118_11 Catalyzes the synthesis of activated sulfate K00860 - 2.7.1.25 0.00000886 48.0
DYD1_k127_3851118_2 Belongs to the class-II pyridine nucleotide-disulfide oxidoreductase family K00384 - 1.8.1.9 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002808 370.0
DYD1_k127_3851118_3 Catalyzes the reversible phosphorylation of S-methyl-5'- thioinosine (MTI) to hypoxanthine and 5-methylthioribose-1- phosphate. Involved in the breakdown of S-methyl-5'-thioadenosine (MTA), a major by-product of polyamine biosynthesis. Catabolism of (MTA) occurs via deamination to MTI and phosphorolysis to hypoxanthine K00772,K19696 - 2.4.2.28,2.4.2.44 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000008476 296.0
DYD1_k127_3851118_4 Removes the formyl group from the N-terminal Met of newly synthesized proteins. Requires at least a dipeptide for an efficient rate of reaction. N-terminal L-methionine is a prerequisite for activity but the enzyme has broad specificity at other positions K01462 - 3.5.1.88 0.00000000000000000000000000000000000000000000000000000000000000000000000000000006284 269.0
DYD1_k127_3851118_5 Catalyzes the formation of 4-diphosphocytidyl-2-C- methyl-D-erythritol from CTP and 2-C-methyl-D-erythritol 4- phosphate (MEP) K00991 - 2.7.7.60 0.0000000000000000000000000000000000000000000000000000000000000000001215 237.0
DYD1_k127_3851118_6 phosphoribosyltransferase K00760 - 2.4.2.8 0.00000000000000000000000000000000000000000000000000000000003526 210.0
DYD1_k127_3851118_7 Involved in the biosynthesis of isopentenyl diphosphate (IPP) and dimethylallyl diphosphate (DMAPP), two major building blocks of isoprenoid compounds. Catalyzes the conversion of 4- diphosphocytidyl-2-C-methyl-D-erythritol 2-phosphate (CDP-ME2P) to 2-C-methyl-D-erythritol 2,4-cyclodiphosphate (ME-CPP) with a corresponding release of cytidine 5-monophosphate (CMP) K01770 - 4.6.1.12 0.00000000000000000000000000000000000000000000000000000001811 203.0
DYD1_k127_3851118_8 Smr protein - - - 0.0000000000000000000000000000000000000000000007036 171.0
DYD1_k127_3851118_9 CarD family K07736 - - 0.000000000000000000001243 100.0
DYD1_k127_3859491_0 Catalyzes the phosphorylation of pyruvate to phosphoenolpyruvate K01007 - 2.7.9.2 2.499e-306 958.0
DYD1_k127_3859491_1 THUMP - - - 0.000000000000000000000000000000000000000000000000000000000000002091 223.0
DYD1_k127_3870450_0 Catalyzes the reversible interconversion of serine and glycine with tetrahydrofolate (THF) serving as the one-carbon carrier. This reaction serves as the major source of one-carbon groups required for the biosynthesis of purines, thymidylate, methionine, and other important biomolecules. Also exhibits THF- independent aldolase activity toward beta-hydroxyamino acids, producing glycine and aldehydes, via a retro-aldol mechanism K00600 - 2.1.2.1 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001348 548.0
DYD1_k127_3870450_1 COG0534 Na -driven multidrug efflux pump K03327 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006925 451.0
DYD1_k127_3870450_10 Haloacid dehalogenase-like hydrolase - - - 0.0000000000000000000000000000000000000000000000000000000000000000007916 242.0
DYD1_k127_3870450_11 Endoribonuclease L-PSP K09021 - - 0.0000000000000000000000000000000000000000000000001366 182.0
DYD1_k127_3870450_2 Phytanoyl-CoA dioxygenase (PhyH) - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001342 383.0
DYD1_k127_3870450_3 PBP superfamily domain K05772 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002764 359.0
DYD1_k127_3870450_4 PBP superfamily domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001764 314.0
DYD1_k127_3870450_5 COG0494 NTP pyrophosphohydrolases including oxidative damage repair enzymes - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006 306.0
DYD1_k127_3870450_6 ABC-type tungstate transport system, periplasmic component K05773 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000003196 298.0
DYD1_k127_3870450_7 ABC-type polar amino acid transport system ATPase component K06857 - 3.6.3.55 0.0000000000000000000000000000000000000000000000000000000000000000000000000000006648 271.0
DYD1_k127_3870450_8 universal stress protein - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000926 271.0
DYD1_k127_3870450_9 COG0604 NADPH quinone reductase and related Zn-dependent oxidoreductases K00344 - 1.6.5.5 0.00000000000000000000000000000000000000000000000000000000000000000000001387 247.0
DYD1_k127_3876057_0 Flavin transferase that catalyzes the transfer of the FMN moiety of FAD and its covalent binding to the hydroxyl group of a threonine residue in a target flavoprotein K03734 - 2.7.1.180 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000315 328.0
DYD1_k127_3876057_1 Major Facilitator Superfamily - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000005969 294.0
DYD1_k127_3876057_2 Sulphur transport K07112 - - 0.0000000000000000000000000000000000000000000000000000000000000000008468 233.0
DYD1_k127_3876057_3 peptidase U32 K08303 GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0044424,GO:0044444,GO:0044464 - 0.00000000000001671 80.0
DYD1_k127_3876057_4 Antibiotic biosynthesis monooxygenase - - - 0.000000003703 63.0
DYD1_k127_3876057_5 Sulphur transport K07112 - - 0.0000003789 51.0
DYD1_k127_38805_0 Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released K03092 GO:0000976,GO:0001067,GO:0001130,GO:0001216,GO:0003674,GO:0003676,GO:0003677,GO:0003690,GO:0003700,GO:0005488,GO:0005575,GO:0006355,GO:0008150,GO:0009889,GO:0009891,GO:0009893,GO:0010468,GO:0010556,GO:0010557,GO:0010604,GO:0010628,GO:0019219,GO:0019222,GO:0031323,GO:0031325,GO:0031326,GO:0031328,GO:0032991,GO:0032993,GO:0043565,GO:0044212,GO:0045893,GO:0045935,GO:0048518,GO:0048522,GO:0050789,GO:0050794,GO:0051171,GO:0051173,GO:0051252,GO:0051254,GO:0060255,GO:0065007,GO:0080090,GO:0097159,GO:0140110,GO:1901363,GO:1902680,GO:1903506,GO:1903508,GO:1990837,GO:2000112,GO:2001141 - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007127 471.0
DYD1_k127_38805_1 modulator of DNA gyrase K03592 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002104 459.0
DYD1_k127_38805_2 Acts as a magnesium transporter K06213 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001048 460.0
DYD1_k127_38805_3 Displays ATPase and GTPase activities K06958 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000004706 288.0
DYD1_k127_38805_4 PTS IIA-like nitrogen-regulatory protein PtsN K02806 - - 0.00000000000000000000000000000000005974 139.0
DYD1_k127_38805_5 regulation of single-species biofilm formation - - - 0.000001496 60.0
DYD1_k127_3884469_0 Amino acid kinase family K00926 - 2.7.2.2 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002154 313.0
DYD1_k127_3884469_1 - - - - 0.0000000000000000000000000000000000003346 153.0
DYD1_k127_3884469_2 - - - - 0.000000000000000000000000000001346 127.0
DYD1_k127_3884469_3 Tetratricopeptide repeat - - - 0.0000000000003007 82.0
DYD1_k127_3884469_4 - - - - 0.0001454 46.0
DYD1_k127_3910980_0 aldehyde oxidase and xanthine dehydrogenase, a b hammerhead - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002012 479.0
DYD1_k127_3910980_1 xanthine dehydrogenase activity K03519 - 1.2.5.3 0.00000000000000000000000000000000000002763 164.0
DYD1_k127_3910980_2 Tripartite tricarboxylate transporter family receptor - - - 0.0000000000000001934 84.0
DYD1_k127_3915970_0 Peptidase family M48 - - - 0.00000000000000000000000000000000000000000000000000000000000000000000001407 257.0
DYD1_k127_3915970_1 - - - - 0.000000000000000000000000000000042 132.0
DYD1_k127_3915970_2 - - - - 0.0000000000000000000000000804 117.0
DYD1_k127_3915970_3 PFAM Malic enzyme, NAD binding domain K00029 - 1.1.1.40 0.00000000000000000001761 95.0
DYD1_k127_3915970_4 Protein of unknown function (DUF4230) - - - 0.00001562 55.0
DYD1_k127_391758_0 Mandelate racemase / muconate lactonizing enzyme, C-terminal domain K01781 - 5.1.2.2 0.00000000000000000000000000000000000000000000000000000000000002847 222.0
DYD1_k127_391758_1 - - - - 0.000000000000000000000000000000000000000003278 164.0
DYD1_k127_391758_2 [2Fe-2S] binding domain - - - 0.0000000000000000000002259 98.0
DYD1_k127_3925819_0 Required for the export of heme to the periplasm for the biogenesis of c-type cytochromes K02195 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006394 317.0
DYD1_k127_3925819_1 PFAM Glycosyl - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000004488 282.0
DYD1_k127_3925819_2 Required for the export of heme to the periplasm for the biogenesis of c-type cytochromes K02194 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000001737 274.0
DYD1_k127_3925819_3 once thought to export heme, this seems not to be the case, but its exact role is uncertain. Responsible for energy coupling to the transport system K02193 - 3.6.3.41 0.000000000000000000000000000000000000000000000000000000004268 205.0
DYD1_k127_3925819_4 Glycosyltransferase like family 2 - - - 0.000000000000000000000000000003905 131.0
DYD1_k127_3925819_5 Chorismate mutase K00014,K00891,K04092,K04516 - 1.1.1.25,2.7.1.71,5.4.99.5 0.0001689 46.0
DYD1_k127_3928234_0 Catalyzes the conversion of acetate into acetyl-CoA (AcCoA), an essential intermediate at the junction of anabolic and catabolic pathways. AcsA undergoes a two-step reaction. In the first half reaction, AcsA combines acetate with ATP to form acetyl-adenylate (AcAMP) intermediate. In the second half reaction, it can then transfer the acetyl group from AcAMP to the sulfhydryl group of CoA, forming the product AcCoA K01895,K01907 - 6.2.1.1,6.2.1.16 1.813e-308 957.0
DYD1_k127_3928234_1 Bacterial NAD-glutamate dehydrogenase K15371 - 1.4.1.2 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006867 415.0
DYD1_k127_3928234_2 Cupin superfamily protein - - - 0.000000000000000000000000000000000000000000000000000000000000000000002066 253.0
DYD1_k127_3928234_3 Putative 2OG-Fe(II) oxygenase - - - 0.00000000000000000000000000000000000000000000000002265 186.0
DYD1_k127_3928234_4 Malate synthase K01638 - 2.3.3.9 0.000000000001459 74.0
DYD1_k127_3950478_0 amino acids such as threonine, to avoid such errors, it has a posttransfer editing activity that hydrolyzes mischarged Thr-tRNA(Val) in a tRNA-dependent manner K01873 - 6.1.1.9 9.294e-202 634.0
DYD1_k127_3957527_0 Histidine kinase-like ATPases - - - 4.148e-313 1049.0
DYD1_k127_3957527_1 COG1529 Aerobic-type carbon monoxide dehydrogenase, large subunit CoxL CutL homologs - - - 4.13e-303 945.0
DYD1_k127_3957527_10 protein histidine kinase activity - - - 0.00000000000002051 81.0
DYD1_k127_3957527_2 FAD dependent oxidoreductase - - - 5.215e-234 733.0
DYD1_k127_3957527_3 Extracellular solute-binding protein K02027 - - 6.847e-214 672.0
DYD1_k127_3957527_4 Part of the ABC transporter complex UgpABCE involved in sn-glycerol-3-phosphate import. Responsible for energy coupling to the transport system K10112 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002517 492.0
DYD1_k127_3957527_5 ABC-type sugar transport system, permease component K02026 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001558 438.0
DYD1_k127_3957527_6 Binding-protein-dependent transport system inner membrane component K02025 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001594 430.0
DYD1_k127_3957527_7 ammonia monooxygenase K07120 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000457 321.0
DYD1_k127_3957527_8 [2Fe-2S] binding domain K07302 - 1.3.99.16 0.0000000000000000000000000000000000000000000000000000000000000000002159 239.0
DYD1_k127_3957527_9 Response regulator receiver - - - 0.00000000000000000000000000000000000000000000000000006514 200.0
DYD1_k127_397146_0 Catalyzes the decarboxylative condensation of pimeloyl- acyl-carrier protein and L-alanine to produce 8-amino-7- oxononanoate (AON), acyl-carrier protein , and carbon dioxide K00652 GO:0003674,GO:0003824,GO:0005488,GO:0006082,GO:0006732,GO:0006766,GO:0006767,GO:0006768,GO:0006790,GO:0006807,GO:0008144,GO:0008150,GO:0008152,GO:0008710,GO:0009058,GO:0009102,GO:0009108,GO:0009110,GO:0009987,GO:0016053,GO:0016740,GO:0016746,GO:0016747,GO:0017144,GO:0018130,GO:0019752,GO:0019842,GO:0030170,GO:0032787,GO:0034641,GO:0036094,GO:0042364,GO:0043167,GO:0043168,GO:0043436,GO:0043603,GO:0043604,GO:0044237,GO:0044249,GO:0044271,GO:0044272,GO:0044281,GO:0044283,GO:0046394,GO:0046483,GO:0048037,GO:0050662,GO:0051186,GO:0051188,GO:0070279,GO:0071704,GO:0072330,GO:0097159,GO:1901360,GO:1901362,GO:1901363,GO:1901564,GO:1901566,GO:1901576 2.3.1.47 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003711 449.0
DYD1_k127_397146_1 Secretin N-terminal domain K02453,K12282 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003448 433.0
DYD1_k127_397146_10 - - - - 0.00002373 52.0
DYD1_k127_397146_2 AAA domain K02450,K12283 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002269 339.0
DYD1_k127_397146_3 Converts the free carboxyl group of a malonyl-thioester to its methyl ester by transfer of a methyl group from S-adenosyl- L-methionine (SAM). It allows to synthesize pimeloyl-ACP via the fatty acid synthetic pathway K02169 - 2.1.1.197 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004907 310.0
DYD1_k127_397146_4 Catalyzes a mechanistically unusual reaction, the ATP- dependent insertion of CO2 between the N7 and N8 nitrogen atoms of 7,8-diaminopelargonic acid (DAPA) to form an ureido ring K01935 - 6.3.3.3 0.00000000000000000000000000000000000000000000000000000000000006408 221.0
DYD1_k127_397146_5 Competence protein - - - 0.0000000000000000000000000000000000000000000000000000000000001857 220.0
DYD1_k127_397146_6 Tetratricopeptide repeat K12284 - - 0.000000000000000006307 98.0
DYD1_k127_397146_7 carbon utilization K12280 - - 0.00000000000000001497 90.0
DYD1_k127_397146_8 Enoyl-CoA hydratase/isomerase - - - 0.0000000000003683 70.0
DYD1_k127_397146_9 - K12281 - - 0.0000186 52.0
DYD1_k127_3971917_0 E1 component of the oxoglutarate dehydrogenase complex which catalyzes the formation of succinyl-CoA from 2-oxoglutarate K00164 - 1.2.4.2 0.0 1164.0
DYD1_k127_3971917_1 One of the primary rRNA binding proteins. Required for association of the 30S and 50S subunits to form the 70S ribosome, for tRNA binding and peptide bond formation. It has been suggested to have peptidyltransferase activity K02886 GO:0002181,GO:0003674,GO:0003676,GO:0003723,GO:0003735,GO:0005198,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0006412,GO:0006518,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0015934,GO:0019538,GO:0022625,GO:0022626,GO:0032991,GO:0034641,GO:0034645,GO:0043043,GO:0043170,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:0071704,GO:0097159,GO:1901363,GO:1901564,GO:1901566,GO:1901576,GO:1990904 - 0.00000000000000000000000000000000000000000000000004144 181.0
DYD1_k127_3971917_2 NlpC/P60 family - - - 0.0000000000000000000000000000000002968 139.0
DYD1_k127_3971917_3 The 2-oxoglutarate dehydrogenase complex catalyzes the overall conversion of 2-oxoglutarate to succinyl-CoA and CO(2) K00658 - 2.3.1.61 0.0000000000000000000000001229 112.0
DYD1_k127_3971917_4 protein acetylation - - - 0.000000000002873 74.0
DYD1_k127_3972659_0 RNA polymerase that catalyzes the synthesis of short RNA molecules used as primers for DNA polymerase during DNA replication K02316 GO:0003674,GO:0003824,GO:0003896,GO:0003899,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006139,GO:0006259,GO:0006260,GO:0006261,GO:0006269,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0008270,GO:0009058,GO:0009059,GO:0009987,GO:0016070,GO:0016740,GO:0016772,GO:0016779,GO:0018130,GO:0019438,GO:0032774,GO:0034062,GO:0034641,GO:0034645,GO:0034654,GO:0043167,GO:0043169,GO:0043170,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044271,GO:0044424,GO:0044464,GO:0046483,GO:0046872,GO:0046914,GO:0071704,GO:0090304,GO:0097747,GO:0140098,GO:1901360,GO:1901362,GO:1901576 - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001005 526.0
DYD1_k127_3972659_1 Required for the formation of a threonylcarbamoyl group on adenosine at position 37 (t(6)A37) in tRNAs that read codons beginning with adenine. Is involved in the transfer of the threonylcarbamoyl moiety of threonylcarbamoyl-AMP (TC-AMP) to the N6 group of A37, together with TsaE and TsaB. TsaD likely plays a direct catalytic role in this reaction K01409 GO:0000408,GO:0002949,GO:0003674,GO:0003824,GO:0004175,GO:0004222,GO:0005575,GO:0005622,GO:0005623,GO:0006139,GO:0006396,GO:0006399,GO:0006400,GO:0006508,GO:0006725,GO:0006807,GO:0008033,GO:0008150,GO:0008152,GO:0008233,GO:0008237,GO:0009451,GO:0009987,GO:0010467,GO:0016070,GO:0016787,GO:0019538,GO:0032991,GO:0034470,GO:0034641,GO:0034660,GO:0043170,GO:0043412,GO:0044237,GO:0044238,GO:0044424,GO:0044464,GO:0046483,GO:0070011,GO:0070525,GO:0071704,GO:0090304,GO:0140096,GO:1901360,GO:1901564 2.3.1.234 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008452 437.0
DYD1_k127_3972659_10 Domain of unknown function (DUF4124) - - - 0.000000000000000000000000000505 118.0
DYD1_k127_3972659_11 Belongs to the bacterial ribosomal protein bS21 family K02970 - - 0.0000000000000000000000006057 105.0
DYD1_k127_3972659_2 Putative S-adenosyl-L-methionine-dependent methyltransferase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002397 315.0
DYD1_k127_3972659_3 KR domain K03793 - 1.5.1.33 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003542 309.0
DYD1_k127_3972659_4 Nudix N-terminal - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000009152 276.0
DYD1_k127_3972659_5 Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released. This sigma factor is the primary sigma factor during exponential growth K03086 GO:0000988,GO:0000990,GO:0003674,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006139,GO:0006351,GO:0006352,GO:0006355,GO:0006725,GO:0006807,GO:0006950,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009266,GO:0009408,GO:0009628,GO:0009889,GO:0009987,GO:0010467,GO:0010468,GO:0010556,GO:0016070,GO:0016987,GO:0018130,GO:0019219,GO:0019222,GO:0019438,GO:0031323,GO:0031326,GO:0032774,GO:0034641,GO:0034645,GO:0034654,GO:0043170,GO:0043254,GO:0044087,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044271,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0050789,GO:0050794,GO:0050896,GO:0051128,GO:0051171,GO:0051252,GO:0060255,GO:0065007,GO:0071704,GO:0080090,GO:0090304,GO:0097659,GO:0140110,GO:1901360,GO:1901362,GO:1901576,GO:1903506,GO:2000112,GO:2000142,GO:2001141 - 0.000000000000000000000000000000000000000000000000000000000000000001074 237.0
DYD1_k127_3972659_6 Catalyzes the transfer of an acyl group from acyl- phosphate (acyl-PO(4)) to glycerol-3-phosphate (G3P) to form lysophosphatidic acid (LPA). This enzyme utilizes acyl-phosphate as fatty acyl donor, but not acyl-CoA or acyl-ACP K08591 - 2.3.1.15 0.00000000000000000000000000000000000000000000000000000000001961 211.0
DYD1_k127_3972659_7 PFAM 7,8-Dihydro-6-hydroxymethylpterin-pyrophosphokinase, HPPK K00950 - 2.7.6.3 0.00000000000000000000000000000000000000000002647 166.0
DYD1_k127_3972659_8 Yqey-like protein - - - 0.0000000000000000000000000000000000000000005761 162.0
DYD1_k127_3972659_9 Catalyzes the conversion of 7,8-dihydroneopterin to 6- hydroxymethyl-7,8-dihydropterin K01633 - 1.13.11.81,4.1.2.25,5.1.99.8 0.000000000000000000000000000000000000009512 152.0
DYD1_k127_3973847_0 protein secretion by the type I secretion system K11004 - - 3.623e-306 957.0
DYD1_k127_3973847_1 Hemolysin-type calcium-binding - - - 2.564e-222 768.0
DYD1_k127_3973847_2 Catalyzes the reversible conversion of 2- phosphoglycerate into phosphoenolpyruvate. It is essential for the degradation of carbohydrates via glycolysis K01689 - 4.2.1.11 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001028 517.0
DYD1_k127_3973847_3 Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family K02022,K11003,K12532 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009468 488.0
DYD1_k127_3973847_4 Nitrile hydratase K01721,K20807 - 4.2.1.84 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000001799 295.0
DYD1_k127_3973847_5 thiamine-containing compound biosynthetic process K02051 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000001215 284.0
DYD1_k127_3973847_6 Phosphotransferase enzyme family - - - 0.0000000000000000000000000000000000000000000000000000000000563 207.0
DYD1_k127_3973847_7 Nitrile hydratase beta subunit K20807 - 4.2.1.84 0.00000000000000000000000000000000001038 139.0
DYD1_k127_3973847_8 Nitrile hydratase beta subunit K20807 - 4.2.1.84 0.0000000000000000000000003319 109.0
DYD1_k127_3973847_9 Belongs to the malate synthase family K01638 - 2.3.3.9 0.0000001996 53.0
DYD1_k127_3991962_0 Protein of unknown function (DUF3445) K22342 - 1.14.13.238 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008646 327.0
DYD1_k127_3991962_1 Endonuclease Exonuclease phosphatase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000002573 289.0
DYD1_k127_3991962_10 Protein of unknown function (DUF465) K09794 - - 0.00000000004746 66.0
DYD1_k127_3991962_11 - - - - 0.0000000002542 62.0
DYD1_k127_3991962_12 - - - - 0.000000004323 61.0
DYD1_k127_3991962_14 - - - - 0.000001483 52.0
DYD1_k127_3991962_15 PFAM Sporulation domain protein - - - 0.00002267 55.0
DYD1_k127_3991962_2 Acyl-transferase K00655 - 2.3.1.51 0.00000000000000000000000000000000000000000000000000000000000000000203 244.0
DYD1_k127_3991962_3 Acts both as a biotin-- acetyl-CoA-carboxylase ligase and a biotin-operon repressor. In the presence of ATP, BirA activates biotin to form the BirA-biotinyl-5'-adenylate (BirA-bio- 5'-AMP or holoBirA) complex. HoloBirA can either transfer the biotinyl moiety to the biotin carboxyl carrier protein (BCCP) subunit of acetyl-CoA carboxylase, or bind to the biotin operator site and inhibit transcription of the operon K03524 GO:0000166,GO:0000976,GO:0000984,GO:0001017,GO:0001067,GO:0003674,GO:0003676,GO:0003677,GO:0003690,GO:0003824,GO:0004077,GO:0005488,GO:0005515,GO:0005524,GO:0005575,GO:0006082,GO:0006464,GO:0006732,GO:0006766,GO:0006767,GO:0006768,GO:0006790,GO:0006807,GO:0008144,GO:0008150,GO:0008152,GO:0009058,GO:0009102,GO:0009108,GO:0009110,GO:0009305,GO:0009374,GO:0009987,GO:0016053,GO:0016874,GO:0016879,GO:0017053,GO:0017076,GO:0017144,GO:0018130,GO:0018271,GO:0019538,GO:0019752,GO:0019842,GO:0030554,GO:0031406,GO:0032553,GO:0032555,GO:0032559,GO:0032787,GO:0032991,GO:0033218,GO:0033293,GO:0034641,GO:0035639,GO:0036094,GO:0036211,GO:0042364,GO:0042802,GO:0042803,GO:0043167,GO:0043168,GO:0043170,GO:0043177,GO:0043412,GO:0043436,GO:0043565,GO:0043603,GO:0043604,GO:0044212,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044272,GO:0044281,GO:0044283,GO:0046394,GO:0046483,GO:0046983,GO:0048037,GO:0050662,GO:0051186,GO:0051188,GO:0071704,GO:0072330,GO:0097159,GO:0097367,GO:0140096,GO:1901265,GO:1901360,GO:1901362,GO:1901363,GO:1901564,GO:1901566,GO:1901576,GO:1901681,GO:1990837 6.3.4.15 0.000000000000000000000000000000000000000000000000000000254 207.0
DYD1_k127_3991962_4 rejects L-amino acids rather than detecting D-amino acids in the active site. By recycling D-aminoacyl-tRNA to D-amino acids and free tRNA molecules, this enzyme counteracts the toxicity associated with the formation of D-aminoacyl-tRNA entities in vivo and helps enforce protein L-homochirality K07560 - - 0.00000000000000000000000000000000000000000000000000001564 191.0
DYD1_k127_3991962_5 methyltransferase activity - - - 0.00000000000000000000000000000000000000002171 159.0
DYD1_k127_3991962_6 Catalyzes the phosphorylation of pantothenate (Pan), the first step in CoA biosynthesis K03525 - 2.7.1.33 0.000000000000000000000000000000000002114 147.0
DYD1_k127_3991962_7 Protein of unknown function, DUF488 - - - 0.0000000000000000000000000000002294 130.0
DYD1_k127_3991962_8 protein kinase activity - - - 0.00000000000000000002602 100.0
DYD1_k127_3991962_9 This protein promotes the GTP-dependent binding of aminoacyl-tRNA to the A-site of ribosomes during protein biosynthesis K02358 GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0044424,GO:0044464 - 0.00000000000000003204 81.0
DYD1_k127_4064866_0 cytochrome c biogenesis protein K06196 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001273 310.0
DYD1_k127_4064866_1 Cytochrome c - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000004844 282.0
DYD1_k127_4064866_2 - - - - 0.0000000000000000000000000000000000000000000009996 171.0
DYD1_k127_4104458_0 Major Facilitator Superfamily - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001947 382.0
DYD1_k127_4104458_1 13-prostaglandin reductase activity K07119 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001055 359.0
DYD1_k127_4104458_10 Putative 2OG-Fe(II) oxygenase - - - 0.0000000000000000007464 88.0
DYD1_k127_4104458_11 - - - - 0.00000000000000001193 85.0
DYD1_k127_4104458_12 - - - - 0.0000001224 58.0
DYD1_k127_4104458_13 transcriptional regulator K08365 - - 0.0002636 51.0
DYD1_k127_4104458_2 Major facilitator Superfamily - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000001717 260.0
DYD1_k127_4104458_3 Belongs to the glutamate--cysteine ligase type 1 family. Type 1 subfamily K01919 - 6.3.2.2 0.0000000000000000000000000000000000000000000000000000000000000000000003233 243.0
DYD1_k127_4104458_4 GGDEF domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000005192 250.0
DYD1_k127_4104458_5 Chromate resistance exported protein - - - 0.00000000000000000000000000000000000000000000000000000000000000000003081 234.0
DYD1_k127_4104458_6 Protein of unknown function (DUF1244) K09948 - - 0.000000000000000000000000000000000000000001289 158.0
DYD1_k127_4104458_7 Belongs to the BolA IbaG family K05527 - - 0.0000000000000000000000000000000007713 142.0
DYD1_k127_4104458_8 response to abiotic stimulus K07126 - - 0.000000000000000000000000000001316 132.0
DYD1_k127_4104458_9 universal stress protein K06149 - - 0.000000000000000000000000001326 121.0
DYD1_k127_4118816_0 acyl-CoA transferases carnitine dehydratase K07749 - 2.8.3.16 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001147 571.0
DYD1_k127_4118816_1 Binding-protein-dependent transport system inner membrane component K02033,K15585 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002145 505.0
DYD1_k127_4118816_2 Binding-protein-dependent transport system inner membrane component K02034 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007891 434.0
DYD1_k127_4118816_3 HMGL-like K01640 GO:0003674,GO:0003824,GO:0004419,GO:0005488,GO:0016829,GO:0016830,GO:0016833,GO:0043167,GO:0043169,GO:0046872 4.1.3.4 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000005248 295.0
DYD1_k127_4118816_4 Bacterial extracellular solute-binding proteins, family 5 Middle K02035 - - 0.000000000000000000000001016 103.0
DYD1_k127_4118816_5 3-hydroxyisobutyrate dehydrogenase K00020 - 1.1.1.31 0.000000006944 59.0
DYD1_k127_4123216_0 Transcriptional regulator - - - 0.000000000000000000000000000000000000000000000000000000000000000000000001693 254.0
DYD1_k127_4123216_2 - - - - 0.0000000004263 67.0
DYD1_k127_41477_0 Maf-like protein K06287 - - 0.0000000000000000000000000000000000000000000000000000000000001042 218.0
DYD1_k127_41477_1 Peptidase family S49 K04773 - - 0.000000000000000000000000000000000000000000111 162.0
DYD1_k127_41477_2 Belongs to the bacterial ribosomal protein bL32 family K02911 GO:0000027,GO:0000302,GO:0003674,GO:0003735,GO:0005198,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0006412,GO:0006518,GO:0006807,GO:0006950,GO:0006979,GO:0006996,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009314,GO:0009628,GO:0009987,GO:0010467,GO:0015934,GO:0016043,GO:0019538,GO:0022607,GO:0022613,GO:0022618,GO:0022625,GO:0022626,GO:0032991,GO:0034622,GO:0034641,GO:0034645,GO:0042221,GO:0042254,GO:0042255,GO:0042273,GO:0043043,GO:0043170,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043603,GO:0043604,GO:0043933,GO:0044085,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:0050896,GO:0065003,GO:0070925,GO:0071704,GO:0071826,GO:0071840,GO:1901564,GO:1901566,GO:1901576,GO:1901700,GO:1990904 - 0.0000000000000000000003664 100.0
DYD1_k127_41477_3 Uncharacterized ACR, COG1399 K07040 - - 0.000000000000000009399 90.0
DYD1_k127_4158752_0 PFAM Alcohol dehydrogenase zinc-binding domain protein - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005351 465.0
DYD1_k127_4158752_1 Involved in the catabolism of oxalate and in the adapatation to low pH via the induction of the oxalate-dependent acid tolerance response (ATR). Catalyzes the transfer of the CoA moiety from formyl-CoA to oxalate K07749 - 2.8.3.16 0.0000000000000000000000000000000000000000000000000000000009645 203.0
DYD1_k127_4158752_2 Universal stress protein family - - - 0.000000000000000000000000000000000000000000000000000003253 201.0
DYD1_k127_4158752_3 Specifically catalyzes the NAD or NADP-dependent dehydrogenation of L-aspartate to iminoaspartate K06989 - 1.4.1.21 0.0000000000000000000000000000001616 124.0
DYD1_k127_4160557_0 Belongs to the ABC transporter superfamily K02031,K02032 - - 4.743e-257 814.0
DYD1_k127_4160557_1 Sodium:solute symporter family - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001442 495.0
DYD1_k127_4160557_10 Methyltransferase domain - - - 0.00000000000000000000000000000000000000000000000000000005711 206.0
DYD1_k127_4160557_11 oxidoreductase activity, acting on CH-OH group of donors - - - 0.00000000000000000000000000000000000000001895 164.0
DYD1_k127_4160557_12 Thioesterase - - - 0.000000000000000000000000000000000008634 140.0
DYD1_k127_4160557_13 transcriptional regulator K16137 - - 0.00000000000000000000000004342 115.0
DYD1_k127_4160557_2 4,5-dihydroxyphthalate decarboxylase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008682 410.0
DYD1_k127_4160557_3 Glucose / Sorbosone dehydrogenase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004751 403.0
DYD1_k127_4160557_4 COG0741 Soluble lytic murein transglycosylase and related regulatory proteins (some contain LysM invasin domains) K08307 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008927 388.0
DYD1_k127_4160557_5 ATPases associated with a variety of cellular activities K01990 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001465 330.0
DYD1_k127_4160557_6 DNA polymerase III is a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria. The epsilon subunit contain the editing function and is a proofreading 3'-5' exonuclease K02342 - 2.7.7.7 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000007421 293.0
DYD1_k127_4160557_7 Endonuclease that specifically degrades the RNA of RNA- DNA hybrids K03469 - 3.1.26.4 0.000000000000000000000000000000000000000000000000000000000000000002487 229.0
DYD1_k127_4160557_8 epimerase dehydratase - - - 0.00000000000000000000000000000000000000000000000000000000000000003559 236.0
DYD1_k127_4160557_9 ABC-2 type transporter K01992 - - 0.00000000000000000000000000000000000000000000000000000002274 200.0
DYD1_k127_4164330_0 Cytochrome c oxidase is the component of the respiratory chain that catalyzes the reduction of oxygen to water. Subunits 1- 3 form the functional core of the enzyme complex. CO I is the catalytic subunit of the enzyme. Electrons originating in cytochrome c are transferred via the copper A center of subunit 2 and heme A of subunit 1 to the bimetallic center formed by heme A3 and copper B K02274 - 1.9.3.1 3.996e-279 865.0
DYD1_k127_4164330_1 Cytochrome C oxidase subunit II, transmembrane domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001822 449.0
DYD1_k127_4164330_2 PFAM Cytochrome c oxidase assembly protein CtaG Cox11 K02258 - - 0.000000000000000000000000000000000000000000000000004064 189.0
DYD1_k127_4171082_0 DEAD-box RNA helicase involved in RNA degradation. Has RNA-dependent ATPase activity and unwinds double-stranded RNA K03732 GO:0003674,GO:0003724,GO:0003824,GO:0004004,GO:0004386,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006139,GO:0006401,GO:0006725,GO:0006807,GO:0008026,GO:0008150,GO:0008152,GO:0008186,GO:0009056,GO:0009057,GO:0009987,GO:0010501,GO:0016070,GO:0016462,GO:0016787,GO:0016817,GO:0016818,GO:0016887,GO:0017111,GO:0019439,GO:0019904,GO:0034641,GO:0034655,GO:0042623,GO:0043170,GO:0044237,GO:0044238,GO:0044248,GO:0044260,GO:0044265,GO:0044270,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0046700,GO:0070035,GO:0071704,GO:0090304,GO:0097718,GO:0140098,GO:1901360,GO:1901361,GO:1901575 3.6.4.13 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001407 516.0
DYD1_k127_4171082_1 serine protease K07403 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003058 475.0
DYD1_k127_4171082_2 Belongs to the thioredoxin family K03671 - - 0.00000000000000000000000000000000000000000000000000004142 195.0
DYD1_k127_4171082_3 Facilitates transcription termination by a mechanism that involves Rho binding to the nascent RNA, activation of Rho's RNA-dependent ATPase activity, and release of the mRNA from the DNA template K03628 - - 0.000000000000000000000000000000000000000002754 156.0
DYD1_k127_420690_0 Glutathione S-transferase, N-terminal domain K00799 - 2.5.1.18 0.000000000000000000000000000000000000000000000000000000000000000000000000000008738 266.0
DYD1_k127_420690_1 glyoxalase bleomycin resistance protein dioxygenase - - - 0.000000000000000000000000000000000000000000000000000000000000001458 228.0
DYD1_k127_420690_2 Domain in cystathionine beta-synthase and other proteins. - - - 0.0000000000000000000000000000000000000000000000000006015 188.0
DYD1_k127_420690_3 Cupin domain - - - 0.0000000000000000000000000000000000000000000000008548 177.0
DYD1_k127_420690_4 redox protein regulator of disulfide bond formation - - - 0.000000000000000000000000000000000000000000000004686 177.0
DYD1_k127_420690_5 phosphohistidine phosphatase, SixA - - - 0.0000000000000000000000000000000000007469 149.0
DYD1_k127_420690_6 - - - - 0.0000000000001899 79.0
DYD1_k127_420690_7 NmrA-like family - - - 0.000001872 49.0
DYD1_k127_4213248_0 Belongs to the class-II pyridine nucleotide-disulfide oxidoreductase family K00384 - 1.8.1.9 0.000000000000000000000000000000000000000000000000000000000000000000000000002746 263.0
DYD1_k127_4213248_1 Translation elongation factor K03833 GO:0000049,GO:0000166,GO:0001514,GO:0001882,GO:0001883,GO:0003674,GO:0003676,GO:0003723,GO:0003729,GO:0003824,GO:0003924,GO:0005488,GO:0005525,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006082,GO:0006412,GO:0006414,GO:0006417,GO:0006451,GO:0006518,GO:0006520,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009069,GO:0009889,GO:0009987,GO:0010467,GO:0010468,GO:0010556,GO:0010608,GO:0016259,GO:0016462,GO:0016787,GO:0016817,GO:0016818,GO:0017076,GO:0017111,GO:0019001,GO:0019003,GO:0019222,GO:0019538,GO:0019752,GO:0031323,GO:0031326,GO:0032268,GO:0032549,GO:0032550,GO:0032553,GO:0032555,GO:0032561,GO:0034248,GO:0034641,GO:0034645,GO:0035368,GO:0035639,GO:0036094,GO:0043043,GO:0043167,GO:0043168,GO:0043170,GO:0043436,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044281,GO:0044424,GO:0044464,GO:0050789,GO:0050794,GO:0051171,GO:0051246,GO:0060255,GO:0065007,GO:0071704,GO:0080090,GO:0097159,GO:0097367,GO:1901265,GO:1901363,GO:1901564,GO:1901566,GO:1901576,GO:1901605,GO:2000112 - 0.00000000005894 65.0
DYD1_k127_4213248_2 Translation elongation factor K03833 GO:0000049,GO:0000166,GO:0001514,GO:0001882,GO:0001883,GO:0003674,GO:0003676,GO:0003723,GO:0003729,GO:0003824,GO:0003924,GO:0005488,GO:0005525,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006082,GO:0006412,GO:0006414,GO:0006417,GO:0006451,GO:0006518,GO:0006520,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009069,GO:0009889,GO:0009987,GO:0010467,GO:0010468,GO:0010556,GO:0010608,GO:0016259,GO:0016462,GO:0016787,GO:0016817,GO:0016818,GO:0017076,GO:0017111,GO:0019001,GO:0019003,GO:0019222,GO:0019538,GO:0019752,GO:0031323,GO:0031326,GO:0032268,GO:0032549,GO:0032550,GO:0032553,GO:0032555,GO:0032561,GO:0034248,GO:0034641,GO:0034645,GO:0035368,GO:0035639,GO:0036094,GO:0043043,GO:0043167,GO:0043168,GO:0043170,GO:0043436,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044281,GO:0044424,GO:0044464,GO:0050789,GO:0050794,GO:0051171,GO:0051246,GO:0060255,GO:0065007,GO:0071704,GO:0080090,GO:0097159,GO:0097367,GO:1901265,GO:1901363,GO:1901564,GO:1901566,GO:1901576,GO:1901605,GO:2000112 - 0.0005938 46.0
DYD1_k127_4227667_0 ATP-dependent serine protease that mediates the selective degradation of mutant and abnormal proteins as well as certain short-lived regulatory proteins. Required for cellular homeostasis and for survival from DNA damage and developmental changes induced by stress. Degrades polypeptides processively to yield small peptide fragments that are 5 to 10 amino acids long. Binds to DNA in a double-stranded, site-specific manner K01338 - 3.4.21.53 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003676 334.0
DYD1_k127_4227667_1 peptidylprolyl isomerase K03770 - 5.2.1.8 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005743 344.0
DYD1_k127_4227667_2 Enoyl- acyl-carrier-protein reductase NADH K00208 - 1.3.1.10,1.3.1.9 0.000000000000000000000000000000000000000000000000000000000000000000000000008784 254.0
DYD1_k127_4227667_3 - - - - 0.0000000000005755 71.0
DYD1_k127_428266_0 COG0493 NADPH-dependent glutamate synthase beta chain and related oxidoreductases K15022 - 1.17.1.10 8.814e-269 839.0
DYD1_k127_428266_1 pyruvate flavodoxin ferredoxin oxidoreductase K00174 - 1.2.7.11,1.2.7.3 1.579e-257 807.0
DYD1_k127_428266_2 Catalyzes the anaerobic formation of alpha-ketobutyrate and ammonia from threonine in a two-step reaction. The first step involved a dehydration of threonine and a production of enamine intermediates (aminocrotonate), which tautomerizes to its imine form (iminobutyrate). Both intermediates are unstable and short- lived. The second step is the nonenzymatic hydrolysis of the enamine imine intermediates to form 2-ketobutyrate and free ammonia. In the low water environment of the cell, the second step is accelerated by RidA K01754 GO:0006082,GO:0006520,GO:0006566,GO:0006807,GO:0008150,GO:0008152,GO:0009066,GO:0009987,GO:0019752,GO:0043436,GO:0044237,GO:0044238,GO:0044281,GO:0071704,GO:1901564,GO:1901605 4.3.1.19 1.855e-225 707.0
DYD1_k127_428266_3 Catalyzes the reversible conversion of ribose-5- phosphate to ribulose 5-phosphate K01807 - 5.3.1.6 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005786 319.0
DYD1_k127_428266_4 EVE domain - - - 0.000000000000000000000000000000000000000000000000000000000002419 212.0
DYD1_k127_428266_5 PPIases accelerate the folding of proteins. It catalyzes the cis-trans isomerization of proline imidic peptide bonds in oligopeptides K03767,K03768 - 5.2.1.8 0.000000000000000000000000000000000000000000000000000000378 209.0
DYD1_k127_428266_6 Belongs to the 5-formyltetrahydrofolate cyclo-ligase family K01934 - 6.3.3.2 0.0000000000000000000000000000000000000000000004435 172.0
DYD1_k127_428266_7 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain K00175 - 1.2.7.11,1.2.7.3 0.0000000000000001107 86.0
DYD1_k127_4300671_0 ABC-type Fe3 -hydroxamate transport system, periplasmic component K02016 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000337 298.0
DYD1_k127_4300671_1 PFAM Metal-dependent phosphohydrolase, HD - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000001832 290.0
DYD1_k127_4300671_2 PFAM N-acetylmuramoyl-L-alanine amidase family 2 K03806 - 3.5.1.28 0.000000000000000000000000000000000000000000000000000000000000000002073 231.0
DYD1_k127_4300671_3 PFAM Cobalamin adenosyltransferase K00798 - 2.5.1.17 0.0000000000000000000000000000000000000000181 155.0
DYD1_k127_4300671_4 Converts cobyric acid to cobinamide by the addition of aminopropanol on the F carboxylic group K02227 - 6.3.1.10 0.000000000000000000000000000000000000004936 158.0
DYD1_k127_4300671_5 Ankyrin repeats (many copies) - - - 0.0000000000000000000002414 110.0
DYD1_k127_4300671_6 Tetratricopeptide TPR_2 repeat protein - - - 0.0000000000008325 80.0
DYD1_k127_4316164_0 Belongs to the universal ribosomal protein uS2 family K02967 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004503 338.0
DYD1_k127_4316164_1 Catalyzes the reversible phosphorylation of UMP to UDP K09903 - 2.7.4.22 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001046 306.0
DYD1_k127_4316164_2 Associates with the EF-Tu.GDP complex and induces the exchange of GDP to GTP. It remains bound to the aminoacyl-tRNA.EF- Tu.GTP complex up to the GTP hydrolysis stage on the ribosome K02357 GO:0003674,GO:0003676,GO:0003723,GO:0003746,GO:0005085,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006412,GO:0006414,GO:0006518,GO:0006807,GO:0008135,GO:0008150,GO:0008152,GO:0008270,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0019538,GO:0019899,GO:0034641,GO:0034645,GO:0043043,GO:0043167,GO:0043169,GO:0043170,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044424,GO:0044444,GO:0044464,GO:0046872,GO:0046914,GO:0051020,GO:0065007,GO:0065009,GO:0071704,GO:0097159,GO:0098772,GO:1901363,GO:1901564,GO:1901566,GO:1901576 - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000002751 297.0
DYD1_k127_4316164_3 Catalyzes the sequential condensation of isopentenyl diphosphate (IPP) with (2E,6E)-farnesyl diphosphate (E,E-FPP) to yield (2Z,6Z,10Z,14Z,18Z,22Z,26Z,30Z,34E,38E)-undecaprenyl diphosphate (di-trans,octa-cis-UPP). UPP is the precursor of glycosyl carrier lipid in the biosynthesis of bacterial cell wall polysaccharide components such as peptidoglycan and lipopolysaccharide K00806 - 2.5.1.31 0.000000000000000000000000000000000000000000000000000000000000000000000000000002317 268.0
DYD1_k127_4316164_4 Responsible for the release of ribosomes from messenger RNA at the termination of protein biosynthesis. May increase the efficiency of translation by recycling ribosomes from one round of translation to another K02838 - - 0.00000000000000000000000000000000000000000000000000000000000000000002079 239.0
DYD1_k127_4316164_5 TIGRFAM methionine aminopeptidase, type I K01265 - 3.4.11.18 0.000000000000000000000000000000000000000000000000000000000000001284 224.0
DYD1_k127_4331664_0 succinate dehydrogenase fumarate reductase, flavoprotein subunit K00394 - 1.8.99.2 4.861e-293 912.0
DYD1_k127_4331664_1 Belongs to the monovalent cation proton antiporter 2 (CPA2) transporter (TC 2.A.37) family K03455,K11745,K11747 - - 1.252e-207 663.0
DYD1_k127_4331664_10 Adenosine-5'-phosphosulfate reductase beta subunit K00395 - 1.8.99.2 0.00000000006931 63.0
DYD1_k127_4331664_11 Trypsin K04771 - 3.4.21.107 0.000000009253 64.0
DYD1_k127_4331664_12 carboxylic ester hydrolase activity - - - 0.00000004651 57.0
DYD1_k127_4331664_13 - - - - 0.0002373 50.0
DYD1_k127_4331664_2 Aminotransferase class-V - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005506 419.0
DYD1_k127_4331664_3 Catalyzes the ferrous insertion into protoporphyrin IX K01772 GO:0003674,GO:0003824,GO:0004325,GO:0006725,GO:0006778,GO:0006779,GO:0006783,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009987,GO:0016829,GO:0018130,GO:0019438,GO:0033013,GO:0033014,GO:0034641,GO:0042168,GO:0042440,GO:0044237,GO:0044249,GO:0044271,GO:0046148,GO:0046483,GO:0051186,GO:0051188,GO:0071704,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576 4.99.1.1,4.99.1.9 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001156 407.0
DYD1_k127_4331664_4 Catalyzes the condensation of isopentenyl diphosphate (IPP) with allylic pyrophosphates generating different type of terpenoids K00806,K12503 GO:0002094,GO:0003674,GO:0003824,GO:0004659,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006066,GO:0006629,GO:0006720,GO:0008150,GO:0008152,GO:0008299,GO:0008610,GO:0009058,GO:0009987,GO:0016093,GO:0016094,GO:0016740,GO:0016765,GO:0044237,GO:0044238,GO:0044249,GO:0044255,GO:0044281,GO:0044283,GO:0044424,GO:0044444,GO:0044464,GO:0046165,GO:0071704,GO:1901576,GO:1901615,GO:1901617 2.5.1.31,2.5.1.68 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000003539 292.0
DYD1_k127_4331664_5 - - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000008457 254.0
DYD1_k127_4331664_6 reductase beta subunit K00395 - 1.8.99.2 0.000000000000000000000000000000000000000000000000000000000000001078 221.0
DYD1_k127_4331664_7 Type II transport protein GspH K08084 - - 0.00000000000000000001097 97.0
DYD1_k127_4331664_8 Trypsin K04771 - 3.4.21.107 0.000000000000000000078 99.0
DYD1_k127_4331664_9 PFAM Thioredoxin K05838 - - 0.0000000000000178 80.0
DYD1_k127_4337284_0 Belongs to the lyase 1 family. Adenylosuccinate lyase subfamily K01756 - 4.3.2.2 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000022 608.0
DYD1_k127_4337284_1 Catalyzes the 2-thiolation of uridine at the wobble position (U34) of tRNA, leading to the formation of s(2)U34 K00566 GO:0001510,GO:0002097,GO:0002098,GO:0002143,GO:0003674,GO:0003824,GO:0004808,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006139,GO:0006396,GO:0006399,GO:0006400,GO:0006725,GO:0006807,GO:0008033,GO:0008150,GO:0008152,GO:0008168,GO:0008173,GO:0008175,GO:0008757,GO:0009451,GO:0009987,GO:0010467,GO:0016070,GO:0016740,GO:0016741,GO:0016782,GO:0016783,GO:0030488,GO:0032259,GO:0034227,GO:0034470,GO:0034641,GO:0034660,GO:0043170,GO:0043412,GO:0043414,GO:0044237,GO:0044238,GO:0044260,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0071704,GO:0090304,GO:0140098,GO:0140101,GO:1901360 2.8.1.13 0.000000000000000000000008097 103.0
DYD1_k127_438095_0 COG2204 Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains K07715 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002758 541.0
DYD1_k127_438095_1 Glucose / Sorbosone dehydrogenase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000128 418.0
DYD1_k127_438095_2 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain K07711 - 2.7.13.3 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000609 343.0
DYD1_k127_438095_3 LysM domain - - - 0.00000000000000000000000000000000002351 141.0
DYD1_k127_438095_4 - - - - 0.00000000000000000000001378 109.0
DYD1_k127_438095_5 bacterial OsmY and nodulation domain - - - 0.0000000000000000000008498 99.0
DYD1_k127_438095_6 Cytochrome C oxidase, cbb3-type, subunit III - - - 0.00000000000007962 77.0
DYD1_k127_438095_7 Pfam:DUF162 K00782 - - 0.00000000257 61.0
DYD1_k127_4399336_0 Oligopeptide/dipeptide transporter, C-terminal region K15583 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003151 477.0
DYD1_k127_4399336_1 ABC transporter, ATP-binding protein K01990 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002546 399.0
DYD1_k127_4399336_2 CcmB protein K01992 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001375 392.0
DYD1_k127_4399336_3 atp-binding protein - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000001488 269.0
DYD1_k127_4404498_0 Belongs to the IlvD Edd family K01687,K22186 - 4.2.1.82,4.2.1.9 8.909e-276 872.0
DYD1_k127_4404498_1 transport system fused permease components - - - 2.645e-229 726.0
DYD1_k127_4404498_10 FAD dependent oxidoreductase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002619 373.0
DYD1_k127_4404498_11 TRAP transporter solute receptor, TAXI family K07080 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008143 363.0
DYD1_k127_4404498_12 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain K12972 - 1.1.1.79,1.1.1.81 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004222 342.0
DYD1_k127_4404498_13 Belongs to the HpcH HpaI aldolase family K01630,K02510 GO:0003674,GO:0003824,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005975,GO:0008150,GO:0008152,GO:0016829,GO:0016830,GO:0016832,GO:0044238,GO:0044424,GO:0044464,GO:0071704 4.1.2.20,4.1.2.52 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008747 322.0
DYD1_k127_4404498_14 COG1028 Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000005791 286.0
DYD1_k127_4404498_15 FCD - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000008136 276.0
DYD1_k127_4404498_16 RarD protein K05786 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000005544 275.0
DYD1_k127_4404498_17 Serine aminopeptidase, S33 - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000003424 266.0
DYD1_k127_4404498_18 MobA-Related Protein - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000001659 258.0
DYD1_k127_4404498_19 Catalyzes the conversion of (8S)-3',8-cyclo-7,8- dihydroguanosine 5'-triphosphate to cyclic pyranopterin monophosphate (cPMP) K03637 - 4.6.1.17 0.00000000000000000000000000000000000000000000000000000000000000000004311 235.0
DYD1_k127_4404498_2 Belongs to the TPP enzyme family K01652 - 2.2.1.6 8.538e-229 724.0
DYD1_k127_4404498_20 Belongs to the peptidase S8 family K12685,K17734 - - 0.0000000000000000000000000000000000000000000000000000000000000000001139 254.0
DYD1_k127_4404498_21 Belongs to the glutathione peroxidase family K00432 - 1.11.1.9 0.000000000000000000000000000000000000000000000000000000000000000007645 229.0
DYD1_k127_4404498_22 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain K18612 - - 0.00000000000000000000000000000000000000000000000000000000000001325 227.0
DYD1_k127_4404498_23 EamA-like transporter family - - - 0.000000000000000000000000000000000000000000000000000000000001241 220.0
DYD1_k127_4404498_24 indolepyruvate ferredoxin oxidoreductase K00179,K04090 - 1.2.7.8 0.00000000000000000000000000000000000000000000000000000000004604 211.0
DYD1_k127_4404498_25 Biotin/lipoate A/B protein ligase family K03524 - 6.3.4.15 0.000000000000000000000000000000000000000000000000000003239 199.0
DYD1_k127_4404498_26 - - - - 0.0000000000000000000000000000000000000000003343 162.0
DYD1_k127_4404498_27 Domain of unknown function (DUF1330) - - - 0.0000000000000000000000000000188 121.0
DYD1_k127_4404498_28 Domain in cystathionine beta-synthase and other proteins. K04767 - - 0.000000000000000004595 98.0
DYD1_k127_4404498_29 COG3170 Tfp pilus assembly protein FimV K08086 - - 0.00000000000000001435 98.0
DYD1_k127_4404498_3 Cys/Met metabolism PLP-dependent enzyme K01740 - 2.5.1.49 5.801e-219 685.0
DYD1_k127_4404498_31 - - - - 0.0000946 50.0
DYD1_k127_4404498_32 Belongs to the DNA photolyase family K01669 - 4.1.99.3 0.0006148 46.0
DYD1_k127_4404498_4 Creatinase/Prolidase N-terminal domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007417 535.0
DYD1_k127_4404498_5 protein related to plant photosystem II stability assembly factor - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009366 519.0
DYD1_k127_4404498_6 Malonyl-CoA decarboxylase N-terminal domain K01578 - 4.1.1.9 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005439 509.0
DYD1_k127_4404498_7 PFAM FAD-dependent pyridine nucleotide-disulphide oxidoreductase K17218 - 1.8.5.4 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005707 446.0
DYD1_k127_4404498_8 Belongs to the LDH2 MDH2 oxidoreductase family - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000227 383.0
DYD1_k127_4404498_9 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007357 371.0
DYD1_k127_4408356_0 PFAM TrkA-N domain K03499 - - 2.803e-202 638.0
DYD1_k127_4408356_1 response regulator receiver K13599 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002798 404.0
DYD1_k127_4408356_2 Bacterial lipid A biosynthesis acyltransferase K02560 - 2.3.1.243 0.00000000000000000000000000000000000000000000000000000000000000000000000000000002251 278.0
DYD1_k127_4408356_3 Lipid A Biosynthesis K02517,K12974 - 2.3.1.241,2.3.1.242 0.0000000000000000000000000000000000000000000000000000000000000000000000000000008931 274.0
DYD1_k127_4408356_4 - - - - 0.00000000000000000000000000000000000000000000000000002017 195.0
DYD1_k127_4408356_5 MotA/TolQ/ExbB proton channel family - - - 0.0000000000000000000000000000000000000004503 157.0
DYD1_k127_4408356_6 TPR repeat - - - 0.000000000000000000000000000003017 124.0
DYD1_k127_4408356_7 - - - - 0.0000000000000000000000002132 112.0
DYD1_k127_4412757_0 Topoisomerase IV is essential for chromosome segregation. It relaxes supercoiled DNA. Performs the decatenation events required during the replication of a circular DNA molecule K02622 - - 7.524e-304 941.0
DYD1_k127_4412757_1 Topoisomerase IV is essential for chromosome segregation. It relaxes supercoiled DNA. Performs the decatenation events required during the replication of a circular DNA molecule K02621 GO:0000819,GO:0003674,GO:0003676,GO:0003677,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005886,GO:0006139,GO:0006259,GO:0006265,GO:0006276,GO:0006725,GO:0006807,GO:0006996,GO:0007049,GO:0007059,GO:0007062,GO:0008150,GO:0008152,GO:0009330,GO:0009987,GO:0016020,GO:0016043,GO:0019897,GO:0019898,GO:0022402,GO:0030541,GO:0032991,GO:0034641,GO:0043170,GO:0044237,GO:0044238,GO:0044260,GO:0044424,GO:0044425,GO:0044444,GO:0044459,GO:0044464,GO:0046483,GO:0051276,GO:0071103,GO:0071704,GO:0071840,GO:0071944,GO:0090304,GO:0097159,GO:0098813,GO:1901360,GO:1901363 - 0.00000000000000000000000000000000000000000000000000000000000000000000004955 243.0
DYD1_k127_442531_0 DNA ligase (ATP) activity K01971 - 6.5.1.1 1.044e-277 874.0
DYD1_k127_442531_1 serine threonine protein kinase K12132 - 2.7.11.1 8.294e-212 691.0
DYD1_k127_442531_10 Sir2 family - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001556 329.0
DYD1_k127_442531_11 Exonuclease - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000164 300.0
DYD1_k127_442531_12 Enoyl-CoA hydratase/isomerase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000004436 278.0
DYD1_k127_442531_13 Peptidase_C39 like family - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000002028 280.0
DYD1_k127_442531_14 SMART cyclic nucleotide-binding K10914 - - 0.0000000000000000000000000000000000000000000000000000000000000000000006616 243.0
DYD1_k127_442531_15 methyltransferase - - - 0.00000000000000000000000000000000000000000000000000000000009065 211.0
DYD1_k127_442531_16 VIT family - - - 0.000000000000000000000000000000000000000000704 160.0
DYD1_k127_442531_17 GGDEF domain - - - 0.00000000000000000000000000007809 128.0
DYD1_k127_442531_18 - - - - 0.0000000000000000000003409 98.0
DYD1_k127_442531_19 Cold shock K03704 - - 0.00000000000000000001558 98.0
DYD1_k127_442531_2 Belongs to the citrate synthase family K01647 - 2.3.3.1 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002942 548.0
DYD1_k127_442531_20 - - - - 0.000000000000000001088 99.0
DYD1_k127_442531_21 - - - - 0.0000001573 57.0
DYD1_k127_442531_22 cellulase activity K02652 - - 0.0001288 50.0
DYD1_k127_442531_23 - - - - 0.0005888 47.0
DYD1_k127_442531_3 Stereospecific condensation of phosphoenolpyruvate (PEP) and D-erythrose-4-phosphate (E4P) giving rise to 3-deoxy-D- arabino-heptulosonate-7-phosphate (DAHP) K01626 - 2.5.1.54 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009513 510.0
DYD1_k127_442531_4 - - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001273 463.0
DYD1_k127_442531_5 Possible lysine decarboxylase K06966 - 3.2.2.10 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001509 409.0
DYD1_k127_442531_6 Citrate transporter - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001143 411.0
DYD1_k127_442531_7 Adenylyl- / guanylyl cyclase, catalytic domain K01768 - 4.6.1.1 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003913 417.0
DYD1_k127_442531_8 Pirin C-terminal cupin domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006315 372.0
DYD1_k127_442531_9 Aldo/keto reductase family - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001288 362.0
DYD1_k127_4428681_0 Signal transduction histidine kinase, phosphotransfer (Hpt) region K13490 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003389 613.0
DYD1_k127_4428681_1 Metallo-beta-lactamase superfamily - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001513 400.0
DYD1_k127_4428681_2 Subtilase family K14645 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008272 362.0
DYD1_k127_4428681_3 Hydrolase K20862 GO:0000287,GO:0003674,GO:0003824,GO:0005488,GO:0006766,GO:0006767,GO:0006771,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009110,GO:0009231,GO:0009987,GO:0016311,GO:0016787,GO:0016788,GO:0016791,GO:0017144,GO:0018130,GO:0022611,GO:0032502,GO:0034641,GO:0042364,GO:0042578,GO:0042726,GO:0042727,GO:0043167,GO:0043169,GO:0043726,GO:0044237,GO:0044249,GO:0044271,GO:0044281,GO:0044283,GO:0046483,GO:0046872,GO:0071704,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576 3.1.3.102,3.1.3.104 0.000000000000000000000000000000000000000000000000005571 189.0
DYD1_k127_4428681_4 Domain of unknown function (DUF4864) - - - 0.0000000000000000000000000000000001121 138.0
DYD1_k127_4428681_5 Belongs to the argininosuccinate synthase family. Type K01940 - 6.3.4.5 0.0000000000000001721 81.0
DYD1_k127_4466484_0 Lanthionine synthetase C family protein K20484 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009781 451.0
DYD1_k127_4466484_1 Patatin-like phospholipase K07001 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004203 417.0
DYD1_k127_4466484_10 pfam yhs - - - 0.000000000002865 70.0
DYD1_k127_4466484_11 VIT family - - - 0.0005787 45.0
DYD1_k127_4466484_2 Nucleotidyltransferase DNA polymerase involved in DNA repair K14161 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001186 385.0
DYD1_k127_4466484_3 Sulfatase-modifying factor enzyme 1 - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000004298 299.0
DYD1_k127_4466484_4 Represses a number of genes involved in the response to DNA damage (SOS response), including recA and lexA. In the presence of single-stranded DNA, RecA interacts with LexA causing an autocatalytic cleavage which disrupts the DNA-binding part of LexA, leading to derepression of the SOS regulon and eventually DNA repair K01356 GO:0000976,GO:0001067,GO:0001130,GO:0001217,GO:0003674,GO:0003676,GO:0003677,GO:0003690,GO:0003700,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006139,GO:0006282,GO:0006351,GO:0006355,GO:0006725,GO:0006807,GO:0006950,GO:0006974,GO:0007154,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009432,GO:0009605,GO:0009889,GO:0009890,GO:0009892,GO:0009987,GO:0009991,GO:0010467,GO:0010468,GO:0010556,GO:0010558,GO:0010605,GO:0010629,GO:0016070,GO:0018130,GO:0019219,GO:0019222,GO:0019438,GO:0031323,GO:0031324,GO:0031326,GO:0031327,GO:0031668,GO:0032774,GO:0032991,GO:0032993,GO:0033554,GO:0034641,GO:0034645,GO:0034654,GO:0042802,GO:0043170,GO:0043565,GO:0044212,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044271,GO:0044424,GO:0044444,GO:0044464,GO:0045892,GO:0045934,GO:0046483,GO:0048519,GO:0048523,GO:0048583,GO:0050789,GO:0050794,GO:0050896,GO:0051052,GO:0051171,GO:0051172,GO:0051252,GO:0051253,GO:0051716,GO:0060255,GO:0065007,GO:0071496,GO:0071704,GO:0080090,GO:0080134,GO:0080135,GO:0090304,GO:0097159,GO:0097659,GO:0140110,GO:1901360,GO:1901362,GO:1901363,GO:1901576,GO:1902679,GO:1903506,GO:1903507,GO:1990837,GO:2000112,GO:2000113,GO:2001020,GO:2001141 3.4.21.88 0.00000000000000000000000000000000000000000000000000000000000000000000000001749 259.0
DYD1_k127_4466484_5 Component of the SOS system and an inhibitor of cell division. Accumulation of SulA causes rapid cessation of cell division and the appearance of long, non-septate filaments. In the presence of GTP, binds a polymerization-competent form of FtsZ in a 1 1 ratio, thus inhibiting FtsZ polymerization and therefore preventing it from participating in the assembly of the Z ring. This mechanism prevents the premature segregation of damaged DNA to daughter cells during cell division K13053,K14160 - - 0.00000000000000000000000000000000000000000000000000000000007583 219.0
DYD1_k127_4466484_6 Cytochrome c - - - 0.000000000000000000000000000000000000000000000000000000649 201.0
DYD1_k127_4466484_7 Belongs to the ompA family K12216 - - 0.0000000000000000000000000000000000000000001976 169.0
DYD1_k127_4466484_8 - - - - 0.00000000000000000000000000000003199 131.0
DYD1_k127_4466484_9 Domain of unknown function (DUF427) - - - 0.0000000000000000008747 85.0
DYD1_k127_4470116_0 Catalyzes the isomerization between 2-isopropylmalate and 3-isopropylmalate, via the formation of 2-isopropylmaleate K01703 - 4.2.1.33,4.2.1.35 4.092e-244 766.0
DYD1_k127_4470116_1 ATP-dependent specificity component of the Clp protease. It directs the protease to specific substrates. Can perform chaperone functions in the absence of ClpP K03544 GO:0000166,GO:0000502,GO:0002020,GO:0003674,GO:0003824,GO:0004176,GO:0005488,GO:0005515,GO:0005524,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006508,GO:0006807,GO:0008144,GO:0008150,GO:0008152,GO:0008233,GO:0009056,GO:0009057,GO:0009376,GO:0009987,GO:0016462,GO:0016787,GO:0016817,GO:0016818,GO:0016887,GO:0017076,GO:0017111,GO:0019538,GO:0019899,GO:0019904,GO:0030163,GO:0030164,GO:0030554,GO:0031597,GO:0032553,GO:0032555,GO:0032559,GO:0032991,GO:0035639,GO:0036094,GO:0042623,GO:0042802,GO:0043167,GO:0043168,GO:0043170,GO:0043335,GO:0044237,GO:0044238,GO:0044248,GO:0044257,GO:0044260,GO:0044265,GO:0044267,GO:0044424,GO:0044444,GO:0044445,GO:0044464,GO:0051301,GO:0051704,GO:0070011,GO:0071704,GO:0097159,GO:0097367,GO:0097718,GO:0140096,GO:1901265,GO:1901363,GO:1901564,GO:1901565,GO:1901575,GO:1902494,GO:1904949,GO:1905368,GO:1905369 - 4.707e-211 662.0
DYD1_k127_4470116_10 Key enzyme in folate metabolism. Catalyzes an essential reaction for de novo glycine and purine synthesis, and for DNA precursor synthesis K00287 - 1.5.1.3 0.00000000000000000000000000000000000000000000003487 175.0
DYD1_k127_4470116_11 ATP-dependent serine protease that mediates the selective degradation of mutant and abnormal proteins as well as certain short-lived regulatory proteins. Required for cellular homeostasis and for survival from DNA damage and developmental changes induced by stress. Degrades polypeptides processively to yield small peptide fragments that are 5 to 10 amino acids long. Binds to DNA in a double-stranded, site-specific manner K01338 - 3.4.21.53 0.000000000000000001188 88.0
DYD1_k127_4470116_2 Catalyzes the NADPH-dependent formation of L-aspartate- semialdehyde (L-ASA) by the reductive dephosphorylation of L- aspartyl-4-phosphate K00133 - 1.2.1.11 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004937 527.0
DYD1_k127_4470116_3 Catalyzes the oxidation of 3-carboxy-2-hydroxy-4- methylpentanoate (3-isopropylmalate) to 3-carboxy-4-methyl-2- oxopentanoate. The product decarboxylates to 4-methyl-2 oxopentanoate K00052 - 1.1.1.85 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007643 502.0
DYD1_k127_4470116_4 Catalyzes the reductive methylation of 2'-deoxyuridine- 5'-monophosphate (dUMP) to 2'-deoxythymidine-5'-monophosphate (dTMP) while utilizing 5,10-methylenetetrahydrofolate (mTHF) as the methyl donor and reductant in the reaction, yielding dihydrofolate (DHF) as a by-product. This enzymatic reaction provides an intracellular de novo source of dTMP, an essential precursor for DNA biosynthesis K00560 - 2.1.1.45 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006211 436.0
DYD1_k127_4470116_5 Catalyzes the isomerization between 2-isopropylmalate and 3-isopropylmalate, via the formation of 2-isopropylmaleate K01704 - 4.2.1.33,4.2.1.35 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005661 344.0
DYD1_k127_4470116_6 Involved in protein export. Acts as a chaperone by maintaining the newly synthesized protein in an open conformation. Functions as a peptidyl-prolyl cis-trans isomerase K03545 GO:0000413,GO:0003674,GO:0003755,GO:0003824,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006457,GO:0006458,GO:0006464,GO:0006807,GO:0006950,GO:0008150,GO:0008152,GO:0009266,GO:0009408,GO:0009628,GO:0009987,GO:0016853,GO:0016859,GO:0018193,GO:0018208,GO:0019538,GO:0036211,GO:0042802,GO:0043021,GO:0043022,GO:0043170,GO:0043335,GO:0043412,GO:0044183,GO:0044237,GO:0044238,GO:0044260,GO:0044267,GO:0044424,GO:0044444,GO:0044464,GO:0044877,GO:0050896,GO:0051083,GO:0061077,GO:0071704,GO:0140096,GO:1901564 - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001752 346.0
DYD1_k127_4470116_7 Cleaves peptides in various proteins in a process that requires ATP hydrolysis. Has a chymotrypsin-like activity. Plays a major role in the degradation of misfolded proteins K01358 - 3.4.21.92 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001463 325.0
DYD1_k127_4470116_8 pilus assembly protein FimV K08086 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000002832 305.0
DYD1_k127_4470116_9 Rhomboid family - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000002592 269.0
DYD1_k127_4476326_0 PFAM Carbamoyltransferase K00612 - - 2.332e-266 828.0
DYD1_k127_4476326_1 Bacterial extracellular solute-binding proteins, family 5 Middle K02035 - - 4.335e-237 756.0
DYD1_k127_4476326_2 N-terminal TM domain of oligopeptide transport permease C K02034 - - 2.392e-200 633.0
DYD1_k127_4476326_3 Belongs to the ABC transporter superfamily K02031,K02032 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004504 572.0
DYD1_k127_4476326_4 Binding-protein-dependent transport system inner membrane component K02033 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001907 510.0
DYD1_k127_4476326_5 Nucleotidyltransferase - - - 0.00000000000000000000000000000000000000000000000000000000001006 220.0
DYD1_k127_4476326_6 Nucleotidyltransferase domain - - - 0.00000000000000000000000000000000000000000000000000007812 193.0
DYD1_k127_4476326_7 - - - - 0.0000000000000000000000000000000000000174 149.0
DYD1_k127_4476326_8 - - - - 0.00000000000000000000000000000000003009 139.0
DYD1_k127_4479468_0 Isocitrate dehydrogenase K00031 GO:0003674,GO:0003824,GO:0004448,GO:0004450,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006091,GO:0006950,GO:0006979,GO:0008150,GO:0008152,GO:0009987,GO:0016491,GO:0016614,GO:0016616,GO:0022900,GO:0044237,GO:0044424,GO:0044444,GO:0044464,GO:0050896,GO:0055114 1.1.1.42 3.009e-263 827.0
DYD1_k127_4479468_1 COG0318 Acyl-CoA synthetases (AMP-forming) AMP-acid ligases II K01897 - 6.2.1.3 1.84e-240 755.0
DYD1_k127_4479468_10 COG1028 Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) K00046,K00065 - 1.1.1.127,1.1.1.69 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000002036 299.0
DYD1_k127_4479468_11 TIGRFAM TRAP transporter, DctM subunit - - - 0.000000000000000000000000000000000000000000000000000000002044 207.0
DYD1_k127_4479468_2 TIGRFAM TRAP transporter, DctM subunit - - - 6.372e-198 629.0
DYD1_k127_4479468_3 Catalyzes the sequential NAD-dependent oxidations of L- histidinol to L-histidinaldehyde and then to L-histidine K15509 - 1.1.1.308 6.803e-196 619.0
DYD1_k127_4479468_4 dihydrolipoamide dehydrogenase K00382 - 1.8.1.4 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000479 593.0
DYD1_k127_4479468_5 Part of the tripartite ATP-independent periplasmic (TRAP) transport system - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002709 574.0
DYD1_k127_4479468_6 FAD binding domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005988 517.0
DYD1_k127_4479468_7 Dynamin family - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001216 522.0
DYD1_k127_4479468_8 The 2-oxoglutarate dehydrogenase complex catalyzes the overall conversion of 2-oxoglutarate to succinyl-CoA and CO(2) K00658 - 2.3.1.61 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004387 415.0
DYD1_k127_4479468_9 Phosphotransferase enzyme family - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009926 323.0
DYD1_k127_4479771_0 Catalyzes the ATP-dependent amidation of deamido-NAD to form NAD. Uses L-glutamine as a nitrogen source K01950 - 6.3.5.1 7.41e-215 680.0
DYD1_k127_4479771_1 Part of a stress-induced multi-chaperone system, it is involved in the recovery of the cell from heat-induced damage, in cooperation with DnaK, DnaJ and GrpE K03695 - - 9.194e-196 615.0
DYD1_k127_4479771_10 May conjugate Arg from its aminoacyl-tRNA to the N- termini of proteins containing an N-terminal aspartate or glutamate K21420 - 2.3.2.29 0.000000000000000000000000000000000000000005879 157.0
DYD1_k127_4479771_11 helix_turn_helix, Arsenical Resistance Operon Repressor - - - 0.0000000000000000000001362 101.0
DYD1_k127_4479771_2 Vacuole effluxer Atg22 like K06902 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003882 522.0
DYD1_k127_4479771_3 protein conserved in bacteria K09919 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001855 418.0
DYD1_k127_4479771_4 Belongs to the NadC ModD family K00767 GO:0003674,GO:0003824,GO:0004514,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006082,GO:0006139,GO:0006520,GO:0006531,GO:0006725,GO:0006732,GO:0006733,GO:0006753,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0009056,GO:0009058,GO:0009066,GO:0009108,GO:0009117,GO:0009165,GO:0009435,GO:0009987,GO:0016054,GO:0016740,GO:0016757,GO:0016763,GO:0017144,GO:0018130,GO:0019355,GO:0019359,GO:0019362,GO:0019363,GO:0019438,GO:0019637,GO:0019674,GO:0019752,GO:0034213,GO:0034627,GO:0034628,GO:0034641,GO:0034654,GO:0042737,GO:0043436,GO:0043648,GO:0043649,GO:0044237,GO:0044238,GO:0044248,GO:0044249,GO:0044270,GO:0044271,GO:0044281,GO:0044282,GO:0044424,GO:0044444,GO:0044464,GO:0046395,GO:0046483,GO:0046496,GO:0046700,GO:0046874,GO:0051186,GO:0051188,GO:0055086,GO:0071704,GO:0072524,GO:0072525,GO:0072526,GO:0090407,GO:1901293,GO:1901360,GO:1901361,GO:1901362,GO:1901564,GO:1901565,GO:1901566,GO:1901575,GO:1901576,GO:1901605 2.4.2.19 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001297 360.0
DYD1_k127_4479771_5 Responsible for synthesis of pseudouridine from uracil K06180 - 5.4.99.23 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002306 359.0
DYD1_k127_4479771_6 Methyltransferase K18911 - 2.1.1.44 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004027 330.0
DYD1_k127_4479771_7 Belongs to the multicopper oxidase YfiH RL5 family K05810 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000003131 296.0
DYD1_k127_4479771_8 Functions in the N-end rule pathway of protein degradation where it conjugates Leu, Phe and, less efficiently, Met from aminoacyl-tRNAs to the N-termini of proteins containing an N-terminal arginine or lysine K00684 - 2.3.2.6 0.000000000000000000000000000000000000000000000000000000000000000000000000000000002835 279.0
DYD1_k127_4479771_9 Part of the outer membrane protein assembly complex, which is involved in assembly and insertion of beta-barrel proteins into the outer membrane K05807 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000004587 261.0
DYD1_k127_4503624_0 Putative diguanylate phosphodiesterase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001465 616.0
DYD1_k127_4503624_1 ATP-dependent serine protease that mediates the selective degradation of mutant and abnormal proteins as well as certain short-lived regulatory proteins. Required for cellular homeostasis and for survival from DNA damage and developmental changes induced by stress. Degrades polypeptides processively to yield small peptide fragments that are 5 to 10 amino acids long. Binds to DNA in a double-stranded, site-specific manner K01338 - 3.4.21.53 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004163 315.0
DYD1_k127_4503624_2 Belongs to the small heat shock protein (HSP20) family - - - 0.000000000000000000000000000000000001496 142.0
DYD1_k127_4503624_3 Methyltransferase type 11 - - - 0.0000000000000001049 82.0
DYD1_k127_4503624_4 Cupin 2, conserved barrel domain protein - - - 0.0000000000002244 76.0
DYD1_k127_4503624_5 PFAM Tetratricopeptide repeat - - - 0.000003391 56.0
DYD1_k127_4504931_0 Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released. This sigma factor is the primary sigma factor during exponential growth K03086 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001099 359.0
DYD1_k127_4504931_1 Zeta toxin - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000132 276.0
DYD1_k127_4504931_2 ORF6N domain - - - 0.00000000000000000000000000000000000000002063 158.0
DYD1_k127_4504931_3 Protein of unknown function (DUF2283) - - - 0.00000000000000000000000001563 109.0
DYD1_k127_4504931_4 - - - - 0.000000000000000006937 85.0
DYD1_k127_4504931_5 Antitoxin Phd_YefM, type II toxin-antitoxin system - - - 0.000000007071 57.0
DYD1_k127_4518437_0 - - - - 1.276e-238 749.0
DYD1_k127_4518437_1 Pyridoxal-phosphate dependent enzyme K01505,K05396,K17950 - 3.5.99.7,4.4.1.15,4.4.1.25 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000153 326.0
DYD1_k127_4518437_2 amidohydrolase - - - 0.000000000000000000000000000000000000000000000000000000000000003194 226.0
DYD1_k127_4568181_0 small GTP-binding protein K02355 - - 2.462e-235 739.0
DYD1_k127_4568181_1 Peptidoglycan-binding domain 1 protein K02450 GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005886,GO:0016020,GO:0044424,GO:0044464,GO:0071944 - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000167 448.0
DYD1_k127_4568181_2 Type II secretion system protein B K02451 - - 0.000000000000000001 95.0
DYD1_k127_4568181_3 OsmC-like protein K06889,K07397 - - 0.000000000000007841 75.0
DYD1_k127_4580722_0 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III K15778 - 5.4.2.2,5.4.2.8 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002721 598.0
DYD1_k127_4580722_1 TIGRFAM deoxycytidine triphosphate deaminase K01494 - 3.5.4.13 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001196 501.0
DYD1_k127_4580722_2 Catalyzes two steps in the biosynthesis of coenzyme A. In the first step cysteine is conjugated to 4'-phosphopantothenate to form 4-phosphopantothenoylcysteine, in the latter compound is decarboxylated to form 4'-phosphopantotheine K13038 GO:0000166,GO:0003674,GO:0003824,GO:0004632,GO:0004633,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006139,GO:0006163,GO:0006164,GO:0006725,GO:0006732,GO:0006753,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009108,GO:0009117,GO:0009150,GO:0009152,GO:0009165,GO:0009259,GO:0009260,GO:0009987,GO:0010181,GO:0015936,GO:0015937,GO:0016829,GO:0016830,GO:0016831,GO:0016874,GO:0016879,GO:0016881,GO:0018130,GO:0019438,GO:0019637,GO:0019693,GO:0032553,GO:0033865,GO:0033866,GO:0033875,GO:0034030,GO:0034032,GO:0034033,GO:0034641,GO:0034654,GO:0036094,GO:0043167,GO:0043168,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0044424,GO:0044444,GO:0044464,GO:0046390,GO:0046483,GO:0048037,GO:0050662,GO:0051186,GO:0051188,GO:0055086,GO:0071704,GO:0072521,GO:0072522,GO:0090407,GO:0097159,GO:0097367,GO:1901135,GO:1901137,GO:1901265,GO:1901293,GO:1901360,GO:1901362,GO:1901363,GO:1901564,GO:1901566,GO:1901576 4.1.1.36,6.3.2.5 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009369 476.0
DYD1_k127_4580722_3 This enzyme is involved in nucleotide metabolism it produces dUMP, the immediate precursor of thymidine nucleotides and it decreases the intracellular concentration of dUTP so that uracil cannot be incorporated into DNA K01520 - 3.6.1.23 0.000000000000000000000000000000000000000000000000000000000000000000000000264 249.0
DYD1_k127_4580722_4 Binds and transfers iron-sulfur (Fe-S) clusters to target apoproteins. Can hydrolyze ATP K03593 GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0044424,GO:0044444,GO:0044464 - 0.0000000000000000000000000000000000000000000000000000000000000000005146 229.0
DYD1_k127_459244_0 Involved in the biosynthesis of porphyrin-containing compound - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005 413.0
DYD1_k127_459244_1 Phosphorolytic exoribonuclease that removes nucleotide residues following the -CCA terminus of tRNA and adds nucleotides to the ends of RNA molecules by using nucleoside diphosphates as substrates K00989 GO:0003674,GO:0003824,GO:0004518,GO:0004540,GO:0006139,GO:0006396,GO:0006399,GO:0006401,GO:0006725,GO:0006807,GO:0008033,GO:0008150,GO:0008152,GO:0009056,GO:0009057,GO:0009987,GO:0010467,GO:0016070,GO:0016072,GO:0016075,GO:0016787,GO:0016788,GO:0019439,GO:0034470,GO:0034641,GO:0034655,GO:0034660,GO:0034661,GO:0043170,GO:0044237,GO:0044238,GO:0044248,GO:0044260,GO:0044265,GO:0044270,GO:0046483,GO:0046700,GO:0071704,GO:0090304,GO:0090305,GO:0090501,GO:0140098,GO:1901360,GO:1901361,GO:1901575 2.7.7.56 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005429 334.0
DYD1_k127_459244_2 Pyrophosphatase that catalyzes the hydrolysis of nucleoside triphosphates to their monophosphate derivatives, with a high preference for the non-canonical purine nucleotides XTP (xanthosine triphosphate), dITP (deoxyinosine triphosphate) and ITP. Seems to function as a house-cleaning enzyme that removes non-canonical purine nucleotides from the nucleotide pool, thus preventing their incorporation into DNA RNA and avoiding chromosomal lesions K02428 - 3.6.1.66 0.000000000000000000000000000000000000000000000000000000000000000000000004964 259.0
DYD1_k127_459244_3 Sigma factor PP2C-like phosphatases K20074 - 3.1.3.16 0.0000000000000000000000000000000000000000000000000000000000000001676 233.0
DYD1_k127_459244_4 serine threonine protein kinase - - - 0.00000000000000000000000000000961 123.0
DYD1_k127_4637798_0 PFAM cell divisionFtsK SpoIIIE K03466 - - 8.115e-214 679.0
DYD1_k127_4637798_1 Catalyzes the attachment of serine to tRNA(Ser). Is also able to aminoacylate tRNA(Sec) with serine, to form the misacylated tRNA L-seryl-tRNA(Sec), which will be further converted into selenocysteinyl-tRNA(Sec) K01875 - 6.1.1.11 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006335 577.0
DYD1_k127_4637798_2 ATPase (AAA K07478 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002766 569.0
DYD1_k127_4637798_3 Participates in the translocation of lipoproteins from the inner membrane to the outer membrane. Only forms a complex with a lipoprotein if the residue after the N-terminal Cys is not an aspartate (The Asp acts as a targeting signal to indicate that the lipoprotein should stay in the inner membrane) K03634 - - 0.000000000000000000000000000000000000000000000001344 182.0
DYD1_k127_4637798_4 Sel1 domain protein repeat-containing protein K07126 - - 0.00000000000000000000004579 105.0
DYD1_k127_4651451_0 peptidyl-tyrosine sulfation - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000001569 303.0
DYD1_k127_4651451_1 Phosphomethylpyrimidine kinase K00941 - 2.7.1.49,2.7.4.7 0.00000000000000000000000000000000000000000000000000000000000000003051 231.0
DYD1_k127_4716923_0 Is required not only for elongation of protein synthesis but also for the initiation of all mRNA translation through initiator tRNA(fMet) aminoacylation K01874 - 6.1.1.10 1.907e-307 959.0
DYD1_k127_4716923_1 Belongs to the argininosuccinate synthase family. Type 1 subfamily K01940 - 6.3.4.5 2.093e-207 649.0
DYD1_k127_4716923_10 Uncharacterized protein conserved in bacteria (DUF2064) K09931 - - 0.000000000000000000000000007474 123.0
DYD1_k127_4716923_2 FIST_C - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002906 387.0
DYD1_k127_4716923_3 TIGRFAM radical SAM Cys-rich domain protein - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006471 373.0
DYD1_k127_4716923_4 DNA repair enzyme that has both DNA N-glycosylase activity and AP-lyase activity. The DNA N-glycosylase activity releases various damaged pyrimidines from DNA by cleaving the N- glycosidic bond, leaving an AP (apurinic apyrimidinic) site. The AP-lyase activity cleaves the phosphodiester bond 3' to the AP site by a beta-elimination, leaving a 3'-terminal unsaturated sugar and a product with a terminal 5'-phosphate K10773 - 4.2.99.18 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007555 316.0
DYD1_k127_4716923_5 Binds and transfers iron-sulfur (Fe-S) clusters to target apoproteins. Can hydrolyze ATP K03593 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000002552 273.0
DYD1_k127_4716923_6 Catalyzes the conversion of hemimercaptal, formed from methylglyoxal and glutathione, to S-lactoylglutathione K01759 - 4.4.1.5 0.0000000000000000000000000000000000000000000000000000000000000000000735 235.0
DYD1_k127_4716923_7 Glycosyl transferase family 2 - - - 0.0000000000000000000000000000000000000000000000000000000000008925 221.0
DYD1_k127_4716923_8 Part of a membrane complex involved in electron transport K03616 - - 0.0000000000000000000000000000000000000000000000000000000005132 208.0
DYD1_k127_4716923_9 Domain of unknown function (DUF1841) - - - 0.0000000000000000000000000000000002065 142.0
DYD1_k127_4729234_0 Belongs to the glyceraldehyde-3-phosphate dehydrogenase family K00134 - 1.2.1.12 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003824 548.0
DYD1_k127_4729234_1 Catalyzes the transfer of a two-carbon ketol group from a ketose donor to an aldose acceptor, via a covalent intermediate with the cofactor thiamine pyrophosphate K00615 - 2.2.1.1 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006963 489.0
DYD1_k127_4742467_0 Rhodanese Homology Domain K01011 - 2.8.1.1,2.8.1.2 0.00000000000000000000000000000000000000000000000000000000000000000000000000000003682 280.0
DYD1_k127_4742467_1 Metallo-beta-lactamase superfamily - - - 0.0000000000000000000000000000000000000000000000000000000000000434 224.0
DYD1_k127_4742467_2 COG0457 FOG TPR repeat - - - 0.000000000000000000000000000000000001017 145.0
DYD1_k127_4742467_3 Protein of unknown function (DUF502) - - - 0.000000000000000000000000000000659 125.0
DYD1_k127_4742467_4 part of a sulfur-relay system K11179 - - 0.0000000000000000000000001307 109.0
DYD1_k127_4742499_0 LysE type translocator - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000001002 296.0
DYD1_k127_4742499_1 Transposase K07497 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000126 293.0
DYD1_k127_4742499_2 - - - - 0.000000000000000000000000000000000000000003218 157.0
DYD1_k127_4742499_3 4Fe-4S dicluster domain - - - 0.00000000000000000000000000001152 130.0
DYD1_k127_4742499_5 Penicillin-insensitive murein endopeptidase - - - 0.0000000000000003132 78.0
DYD1_k127_4742499_6 Transposase K07483 - - 0.000000000004664 72.0
DYD1_k127_4772156_0 ATPase, P-type (transporting), HAD superfamily, subfamily IC K01533,K17686 - 3.6.3.4,3.6.3.54 0.0 1114.0
DYD1_k127_4772156_1 Belongs to the pyruvate kinase family K00873 - 2.7.1.40 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002866 567.0
DYD1_k127_4772156_10 PFAM Protein required for attachment to host cells - - - 0.00000000000000000000000000000000000000005799 160.0
DYD1_k127_4772156_11 Cytochrome C oxidase, cbb3-type, subunit III - - - 0.000000000000000000000000000000000000004061 149.0
DYD1_k127_4772156_12 Transcriptional - - - 0.00000000000000000000000000000000000000725 149.0
DYD1_k127_4772156_13 LTXXQ motif family protein - - - 0.000000000000000000000000000000004924 137.0
DYD1_k127_4772156_14 haloacid dehalogenase-like hydrolase - - - 0.0000000000000000000000000000002922 124.0
DYD1_k127_4772156_15 - - - - 0.0000000000000000000000003718 108.0
DYD1_k127_4772156_16 - - - - 0.0000000000000000000000006241 109.0
DYD1_k127_4772156_18 Cytochrome c, class I - - - 0.0000000000000000004669 98.0
DYD1_k127_4772156_19 ATP-independent chaperone mediated protein folding - - - 0.00000000000008118 79.0
DYD1_k127_4772156_2 fructose-bisphosphate aldolase K01623 - 4.1.2.13 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000205 442.0
DYD1_k127_4772156_20 Short C-terminal domain K08982 - - 0.000000000000129 73.0
DYD1_k127_4772156_21 GDSL-like Lipase/Acylhydrolase - - - 0.000000001084 68.0
DYD1_k127_4772156_22 NfeD-like C-terminal, partner-binding - - - 0.00000002894 60.0
DYD1_k127_4772156_3 SAICAR synthetase K01923 - 6.3.2.6 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002726 430.0
DYD1_k127_4772156_4 Poorly processive, error-prone DNA polymerase involved in untargeted mutagenesis. Copies undamaged DNA at stalled replication forks, which arise in vivo from mismatched or misaligned primer ends. These misaligned primers can be extended by PolIV. Exhibits no 3'-5' exonuclease (proofreading) activity. May be involved in translesional synthesis, in conjunction with the beta clamp from PolIII K02346 - 2.7.7.7 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000015 376.0
DYD1_k127_4772156_5 Esterase of the alpha-beta hydrolase superfamily K07001 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000169 271.0
DYD1_k127_4772156_6 Carboxymuconolactone decarboxylase family - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000002272 257.0
DYD1_k127_4772156_7 Belongs to the phosphoglycerate kinase family K00927 - 2.7.2.3 0.000000000000000000000000000000000000000000000000000000000000000002595 229.0
DYD1_k127_4772156_8 Cupredoxin-like domain - - - 0.000000000000000000000000000000000000000000000000005552 197.0
DYD1_k127_4772156_9 - - - - 0.00000000000000000000000000000000000000000006741 168.0
DYD1_k127_4796802_0 Cobalamin-independent synthase, Catalytic domain K00549,K22363 - 2.1.1.14,4.4.1.23 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004821 552.0
DYD1_k127_4796802_1 Galactose oxidase, central domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001858 388.0
DYD1_k127_4796802_2 Cupin - - - 0.00000000000000000000000000000000000000000000000000000001811 200.0
DYD1_k127_4796802_3 LysE type translocator - - - 0.0000000000000000000000000000003146 134.0
DYD1_k127_4796802_4 Polymer-forming cytoskeletal - - - 0.00000000000000000000001336 109.0
DYD1_k127_4796802_5 Aldo/keto reductase family - - - 0.0000000000000000002075 88.0
DYD1_k127_4796802_6 Reversibly catalyzes the transfer of the carbamoyl group from carbamoyl phosphate (CP) to the N(epsilon) atom of ornithine (ORN) to produce L-citrulline K00611 - 2.1.3.3 0.000000000000001142 80.0
DYD1_k127_4796802_8 - - - - 0.00009659 51.0
DYD1_k127_4808659_0 Diguanylate cyclase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002975 559.0
DYD1_k127_4808659_1 Involved in the TonB-independent uptake of proteins K03641 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001145 473.0
DYD1_k127_4808659_10 OmpA family K03640 - - 0.0000000000000000000000000000000000001429 148.0
DYD1_k127_4808659_11 Sh3 type 3 domain protein K01361 - 3.4.21.96 0.000000000000000000000000000000000004339 147.0
DYD1_k127_4808659_12 TonB C terminal - - - 0.0000000000000000000000000000006534 133.0
DYD1_k127_4808659_13 Biopolymer transport protein K03560 GO:0005575,GO:0005623,GO:0005886,GO:0005887,GO:0006810,GO:0008150,GO:0015833,GO:0015893,GO:0016020,GO:0016021,GO:0031224,GO:0031226,GO:0032153,GO:0042221,GO:0042493,GO:0042886,GO:0042891,GO:0043213,GO:0044425,GO:0044459,GO:0044464,GO:0050896,GO:0051179,GO:0051234,GO:0071702,GO:0071705,GO:0071944 - 0.000000000000007538 76.0
DYD1_k127_4808659_2 Sulphur transport K07112 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000249 406.0
DYD1_k127_4808659_3 Catalyzes the ATP-dependent conversion of 7-carboxy-7- deazaguanine (CDG) to 7-cyano-7-deazaguanine (preQ(0)) K06920 - 6.3.4.20 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007302 330.0
DYD1_k127_4808659_4 Catalyzes the complex heterocyclic radical-mediated conversion of 6-carboxy-5,6,7,8-tetrahydropterin (CPH4) to 7- carboxy-7-deazaguanine (CDG), a step common to the biosynthetic pathways of all 7-deazapurine-containing compounds K10026 - 4.3.99.3 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006195 317.0
DYD1_k127_4808659_5 His Kinase A (phosphoacceptor) domain - - - 0.00000000000000000000000000000000000000000000000000000000001325 237.0
DYD1_k127_4808659_6 helix_turn_helix, Lux Regulon - - - 0.00000000000000000000000000000000000000000000000000000000002229 215.0
DYD1_k127_4808659_7 GGDEF domain - - - 0.00000000000000000000000000000000000000000000001836 188.0
DYD1_k127_4808659_8 Mediates coordination of peptidoglycan synthesis and outer membrane constriction during cell division - - - 0.00000000000000000000000000000000000000000000003359 179.0
DYD1_k127_4808659_9 YMGG-like Gly-zipper - - - 0.0000000000000000000000000000000000000000000003141 174.0
DYD1_k127_4811026_0 Class II Aldolase and Adducin N-terminal domain - - - 1.049e-292 911.0
DYD1_k127_4811026_1 Aldehyde dehydrogenase K00135 - 1.2.1.16,1.2.1.20,1.2.1.79 1.865e-221 696.0
DYD1_k127_4811026_10 L,D-transpeptidase catalytic domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000008711 249.0
DYD1_k127_4811026_11 Transglutaminase/protease-like homologues - - - 0.000000000000000000000000000000000000000000000000000000000000000000000006244 264.0
DYD1_k127_4811026_12 Ion channel - - - 0.00000000000000000000000000000000000000000000000000000000000003815 221.0
DYD1_k127_4811026_13 Catalyzes the deamination of adenosine to inosine at the wobble position 34 of tRNA(Arg2) K11991 - 3.5.4.33 0.0000000000000000000000000000000000000000000000000000001432 199.0
DYD1_k127_4811026_14 Cytochrome C oxidase, cbb3-type, subunit III K08738 - - 0.0000000000000000000000000000000000000000000000000003586 189.0
DYD1_k127_4811026_15 COG0454 Histone acetyltransferase HPA2 and related acetyltransferases - - - 0.0000000000000000000000000000000000000000001279 164.0
DYD1_k127_4811026_16 Domain of unknown function (DUF4936) - - - 0.000000000001161 73.0
DYD1_k127_4811026_17 Animal haem peroxidase - - - 0.00000000009135 65.0
DYD1_k127_4811026_18 - - - - 0.000000007406 66.0
DYD1_k127_4811026_19 PFAM Transposase, IS116 IS110 IS902 - - - 0.00000109 53.0
DYD1_k127_4811026_2 ABC transporter transmembrane region - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000504 533.0
DYD1_k127_4811026_3 Diguanylate cyclase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001001 526.0
DYD1_k127_4811026_4 Catalyzes the interconversion of methylthioribose-1- phosphate (MTR-1-P) into methylthioribulose-1-phosphate (MTRu-1- P) K08963 - 5.3.1.23 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003376 441.0
DYD1_k127_4811026_5 Mo-co oxidoreductase dimerisation domain K17225 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002981 419.0
DYD1_k127_4811026_6 KR domain K00059 - 1.1.1.100 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002007 344.0
DYD1_k127_4811026_7 Belongs to the GcvT family K06980 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001309 311.0
DYD1_k127_4811026_8 Tripartite tricarboxylate transporter family receptor - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000001941 265.0
DYD1_k127_4811026_9 Transport and Golgi organisation 2 - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000003163 255.0
DYD1_k127_4845615_0 Homeodomain-like domain K07497 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001514 405.0
DYD1_k127_4845615_1 ParE toxin of type II toxin-antitoxin system, parDE - - - 0.000000004375 58.0
DYD1_k127_4864832_0 DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates K03043 - 2.7.7.6 0.0 1289.0
DYD1_k127_4864832_1 Binds directly to 23S rRNA. The L1 stalk is quite mobile in the ribosome, and is involved in E site tRNA release K02863 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006208 310.0
DYD1_k127_4864832_2 Participates in transcription elongation, termination and antitermination K02601 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000006731 289.0
DYD1_k127_4864832_3 Forms part of the ribosomal stalk which helps the ribosome interact with GTP-bound translation factors K02867 - - 0.000000000000000000000000000000000000000000000000000000000000000000001295 237.0
DYD1_k127_4864832_4 Forms part of the ribosomal stalk, playing a central role in the interaction of the ribosome with GTP-bound translation factors K02864 - - 0.00000000000000000000000000000000000000000000000007793 183.0
DYD1_k127_4864832_5 Forms part of the ribosomal stalk which helps the ribosome interact with GTP-bound translation factors. Is thus essential for accurate translation K02935 - - 0.00000000000000000000000000000000000000000004115 164.0
DYD1_k127_4864832_6 Essential subunit of the Sec protein translocation channel SecYEG. Clamps together the 2 halves of SecY. May contact the channel plug during translocation K03073 GO:0002790,GO:0003674,GO:0005215,GO:0005575,GO:0005623,GO:0005886,GO:0005887,GO:0006605,GO:0006612,GO:0006613,GO:0006614,GO:0006616,GO:0006810,GO:0006886,GO:0008104,GO:0008150,GO:0008320,GO:0008565,GO:0009306,GO:0009987,GO:0015031,GO:0015833,GO:0016020,GO:0016021,GO:0016043,GO:0022857,GO:0022884,GO:0031224,GO:0031226,GO:0031522,GO:0032940,GO:0032978,GO:0032991,GO:0033036,GO:0033365,GO:0034613,GO:0042886,GO:0042887,GO:0043952,GO:0044425,GO:0044459,GO:0044464,GO:0045047,GO:0045184,GO:0046903,GO:0046907,GO:0051179,GO:0051205,GO:0051234,GO:0051641,GO:0051649,GO:0055085,GO:0061024,GO:0065002,GO:0070727,GO:0070972,GO:0071702,GO:0071705,GO:0071806,GO:0071840,GO:0071944,GO:0072594,GO:0072599,GO:0072657,GO:0090150,GO:1904680 - 0.0000000000000000000001476 102.0
DYD1_k127_4864832_7 This protein promotes the GTP-dependent binding of aminoacyl-tRNA to the A-site of ribosomes during protein biosynthesis K02358 - - 0.000000000000000952 76.0
DYD1_k127_4864832_8 Essential subunit of the Sec protein translocation channel SecYEG. Clamps together the 2 halves of SecY. May contact the channel plug during translocation K03073 - - 0.000007924 51.0
DYD1_k127_4885914_0 periplasmic protein thiol disulfide K02199 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000008628 260.0
DYD1_k127_4885914_1 Cytochrome c - - - 0.0000000000000000000000000000000000000000000000000000000000000000000005759 246.0
DYD1_k127_4885914_2 COG1651 Protein-disulfide isomerase - - - 0.000000000000000000000000000000000000000000000000000000002463 207.0
DYD1_k127_4885914_3 Thioredoxin-like - - - 0.00000000000000000000000000000000000000000000000000000187 198.0
DYD1_k127_4885914_4 helix_turn_helix, mercury resistance K08365 - - 0.0000000000000000000000000000000003509 139.0
DYD1_k127_4885914_5 Alkylmercury lyase K00221 - 4.99.1.2 0.00000000000000000000000000000005607 133.0
DYD1_k127_4980564_0 Filamentation induced by cAMP protein fic - - - 2.806e-201 637.0
DYD1_k127_4980564_1 nuclear-transcribed mRNA catabolic process, no-go decay - - - 0.00000000000000000000000000000000000000000000000000001182 199.0
DYD1_k127_4980564_2 DDE superfamily endonuclease - - - 0.0000000000000000000000000000000000000000000000000938 177.0
DYD1_k127_4980564_3 Transposase K07494 - - 0.000000002249 68.0
DYD1_k127_4992656_0 von Willebrand factor type A domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002288 410.0
DYD1_k127_4993406_0 Putative cyclase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001408 470.0
DYD1_k127_4993406_1 PFAM conserved - - - 0.0000000000000000000000000000000000000000000000000001095 193.0
DYD1_k127_5010048_0 40-residue YVTN family beta-propeller repeat - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004858 327.0
DYD1_k127_5010048_1 COG0697 Permeases of the drug metabolite transporter (DMT) superfamily - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000006855 297.0
DYD1_k127_5010048_2 Glyoxalase-like domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000007382 243.0
DYD1_k127_5010048_3 universal stress protein - - - 0.0000000000000000000000000000000000000000000000000000000000000000009435 238.0
DYD1_k127_5010048_4 - - - - 0.000000000000000000000000000000000000000000000000005826 192.0
DYD1_k127_5010048_5 Aldehyde dehydrogenase family K00128,K00146 - 1.2.1.3,1.2.1.39 0.0000000000000000005422 86.0
DYD1_k127_5022612_0 COG0367 Asparagine synthase (glutamine-hydrolyzing) K01953 - 6.3.5.4 3.588e-260 813.0
DYD1_k127_5022612_1 ATP-grasp K03802 - 6.3.2.29,6.3.2.30 6.486e-235 739.0
DYD1_k127_5022612_2 peptidase M42 - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005618 543.0
DYD1_k127_5022612_3 Adenosine/AMP deaminase K01488,K21053 - 3.5.4.2,3.5.4.4 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002051 504.0
DYD1_k127_5022612_4 Catalyzes the oxidation of the C8 methyl side group on heme O porphyrin ring into a formyl group K02259 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002482 377.0
DYD1_k127_5022612_5 It is involved in the biological process described with Mo-molybdopterin cofactor biosynthetic process K15376 GO:0001941,GO:0003674,GO:0003824,GO:0005102,GO:0005198,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005634,GO:0005737,GO:0005886,GO:0006139,GO:0006163,GO:0006464,GO:0006605,GO:0006725,GO:0006732,GO:0006753,GO:0006777,GO:0006793,GO:0006796,GO:0006807,GO:0006810,GO:0006886,GO:0006996,GO:0007275,GO:0007399,GO:0007416,GO:0007528,GO:0007529,GO:0008092,GO:0008104,GO:0008150,GO:0008152,GO:0008940,GO:0009058,GO:0009108,GO:0009116,GO:0009117,GO:0009119,GO:0009141,GO:0009144,GO:0009150,GO:0009199,GO:0009205,GO:0009259,GO:0009898,GO:0009987,GO:0010035,GO:0010038,GO:0015031,GO:0015631,GO:0015833,GO:0016020,GO:0016043,GO:0016491,GO:0016661,GO:0016740,GO:0016772,GO:0016779,GO:0018130,GO:0018315,GO:0019538,GO:0019637,GO:0019693,GO:0019720,GO:0019897,GO:0019898,GO:0022607,GO:0030425,GO:0030674,GO:0031234,GO:0031503,GO:0032324,GO:0032501,GO:0032502,GO:0032947,GO:0033036,GO:0034613,GO:0034641,GO:0036211,GO:0036477,GO:0040034,GO:0042040,GO:0042221,GO:0042278,GO:0042802,GO:0042803,GO:0042886,GO:0042995,GO:0043005,GO:0043025,GO:0043113,GO:0043170,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0043412,GO:0043545,GO:0043546,GO:0043933,GO:0043954,GO:0044085,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044281,GO:0044297,GO:0044424,GO:0044425,GO:0044456,GO:0044459,GO:0044463,GO:0044464,GO:0045184,GO:0045202,GO:0045211,GO:0046039,GO:0046128,GO:0046483,GO:0046907,GO:0046983,GO:0048037,GO:0048731,GO:0048856,GO:0050662,GO:0050789,GO:0050793,GO:0050808,GO:0050896,GO:0051179,GO:0051186,GO:0051188,GO:0051189,GO:0051234,GO:0051259,GO:0051260,GO:0051641,GO:0051649,GO:0051668,GO:0055086,GO:0055114,GO:0060077,GO:0060090,GO:0061024,GO:0061598,GO:0061599,GO:0065003,GO:0065007,GO:0065008,GO:0070566,GO:0070727,GO:0071702,GO:0071704,GO:0071705,GO:0071840,GO:0071944,GO:0072521,GO:0072578,GO:0072579,GO:0072657,GO:0090407,GO:0097060,GO:0097106,GO:0097112,GO:0097120,GO:0097159,GO:0097447,GO:0097458,GO:0098552,GO:0098562,GO:0098590,GO:0098794,GO:0098879,GO:0098880,GO:0098918,GO:0098953,GO:0098970,GO:0099072,GO:0099084,GO:0099173,GO:0099186,GO:0099558,GO:0099572,GO:0099628,GO:0120025,GO:0120038,GO:1901068,GO:1901135,GO:1901360,GO:1901362,GO:1901363,GO:1901564,GO:1901566,GO:1901576,GO:1901657 2.10.1.1,2.7.7.75 0.000000000000000000000000000000000000000000000000000000000000000000000000000000002852 285.0
DYD1_k127_5022612_6 helix_turn_helix multiple antibiotic resistance protein - - - 0.00000000000000000000000000000000000000001093 159.0
DYD1_k127_5022612_7 Transcriptional regulator K13643 - - 0.0000000000000000000000002989 109.0
DYD1_k127_504137_0 Tripartite ATP-independent periplasmic transporter, DctM component - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002892 386.0
DYD1_k127_504137_1 TRAP transporter solute receptor, TAXI family K07080 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002396 347.0
DYD1_k127_504137_2 Belongs to the hyi family K01816 GO:0003674,GO:0003824,GO:0005488,GO:0005515,GO:0006081,GO:0006082,GO:0008150,GO:0008152,GO:0008903,GO:0009987,GO:0016853,GO:0016860,GO:0016861,GO:0019752,GO:0032787,GO:0042802,GO:0042803,GO:0043436,GO:0044237,GO:0044281,GO:0046487,GO:0046983,GO:0071704 5.3.1.22 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002613 324.0
DYD1_k127_5061037_0 Cobalamin-independent synthase, Catalytic domain K00549 - 2.1.1.14 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004409 490.0
DYD1_k127_5061037_1 Belongs to the GST superfamily K00799,K11209 - 2.5.1.18 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002147 335.0
DYD1_k127_5061037_2 Domain in cystathionine beta-synthase and other proteins. - - - 0.000000000000000000000000000000000000000000000000000000000000000000001578 241.0
DYD1_k127_5061037_3 Antibiotic biosynthesis monooxygenase - - - 0.00000000000000000000000000000000000836 139.0
DYD1_k127_5061037_4 alkyl hydroperoxide reductase Thiol specific antioxidant Mal allergen - - - 0.0000000000001879 75.0
DYD1_k127_506877_0 The UvrABC repair system catalyzes the recognition and processing of DNA lesions. UvrA is an ATPase and a DNA-binding protein. A damage recognition complex composed of 2 UvrA and 2 UvrB subunits scans DNA for abnormalities. When the presence of a lesion has been verified by UvrB, the UvrA molecules dissociate K03701 - - 0.0 1378.0
DYD1_k127_506877_1 The central subunit of the protein translocation channel SecYEG. Consists of two halves formed by TMs 1-5 and 6-10. These two domains form a lateral gate at the front which open onto the bilayer between TMs 2 and 7, and are clamped together by SecE at the back. The channel is closed by both a pore ring composed of hydrophobic SecY resides and a short helix (helix 2A) on the extracellular side of the membrane which forms a plug. The plug probably moves laterally to allow the channel to open. The ring and the pore may move independently K03076 GO:0002790,GO:0003674,GO:0005048,GO:0005215,GO:0005488,GO:0005575,GO:0005623,GO:0005886,GO:0005887,GO:0006605,GO:0006612,GO:0006613,GO:0006614,GO:0006616,GO:0006810,GO:0006886,GO:0008104,GO:0008150,GO:0008320,GO:0008565,GO:0009306,GO:0009987,GO:0015031,GO:0015833,GO:0016020,GO:0016021,GO:0016043,GO:0022857,GO:0022884,GO:0031224,GO:0031226,GO:0031522,GO:0032940,GO:0032978,GO:0032991,GO:0033036,GO:0033218,GO:0033365,GO:0034613,GO:0042277,GO:0042886,GO:0042887,GO:0043952,GO:0044425,GO:0044459,GO:0044464,GO:0045047,GO:0045184,GO:0046903,GO:0046907,GO:0051179,GO:0051205,GO:0051234,GO:0051641,GO:0051649,GO:0055085,GO:0061024,GO:0065002,GO:0070727,GO:0070972,GO:0071702,GO:0071705,GO:0071806,GO:0071840,GO:0071944,GO:0072594,GO:0072599,GO:0072657,GO:0090150,GO:1904680 - 3.866e-201 634.0
DYD1_k127_506877_10 Located on the platform of the 30S subunit, it bridges several disparate RNA helices of the 16S rRNA. Forms part of the Shine-Dalgarno cleft in the 70S ribosome K02948 - - 0.000000000000000000000000000000000000000000000000000000001299 202.0
DYD1_k127_506877_11 Binds to the 23S rRNA K02876 - - 0.000000000000000000000000000000000000000000000001152 182.0
DYD1_k127_506877_12 Located at the top of the head of the 30S subunit, it contacts several helices of the 16S rRNA. In the 70S ribosome it contacts the 23S rRNA (bridge B1a) and protein L5 of the 50S subunit (bridge B1b), connecting the 2 subunits K02952 - - 0.000000000000000000000000000000000000000000000008803 176.0
DYD1_k127_506877_13 Ribosomal protein L17 K02879 GO:0000027,GO:0003674,GO:0003735,GO:0005198,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0006412,GO:0006518,GO:0006807,GO:0006996,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0015934,GO:0016043,GO:0019538,GO:0022607,GO:0022613,GO:0022618,GO:0022625,GO:0022626,GO:0032991,GO:0034622,GO:0034641,GO:0034645,GO:0042254,GO:0042255,GO:0042273,GO:0043043,GO:0043170,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043603,GO:0043604,GO:0043933,GO:0044085,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:0065003,GO:0070925,GO:0071704,GO:0071826,GO:0071840,GO:1901564,GO:1901566,GO:1901576,GO:1990904 - 0.00000000000000000000000000000000000000000000006563 175.0
DYD1_k127_506877_14 This is one of the proteins that binds and probably mediates the attachment of the 5S RNA into the large ribosomal subunit, where it forms part of the central protuberance K02881 - - 0.0000000000000004786 78.0
DYD1_k127_506877_15 Ribosomal protein L30 K02907 - - 0.000000000000004581 81.0
DYD1_k127_506877_16 Belongs to the bacterial ribosomal protein bL36 family K02919 - - 0.00000000000006282 71.0
DYD1_k127_506877_2 PFAM Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000251 513.0
DYD1_k127_506877_3 DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates K03040 GO:0003674,GO:0003824,GO:0003899,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006139,GO:0006351,GO:0006354,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0008270,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0016070,GO:0016740,GO:0016772,GO:0016779,GO:0018130,GO:0019438,GO:0032774,GO:0034062,GO:0034641,GO:0034645,GO:0034654,GO:0043167,GO:0043169,GO:0043170,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044271,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0046872,GO:0046914,GO:0071704,GO:0090304,GO:0097659,GO:0097747,GO:0140098,GO:1901360,GO:1901362,GO:1901576 2.7.7.6 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002947 475.0
DYD1_k127_506877_4 PFAM Major Facilitator Superfamily - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001005 450.0
DYD1_k127_506877_5 One of the primary rRNA binding proteins, it binds directly to 16S rRNA where it nucleates assembly of the body of the 30S subunit K02986 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003073 313.0
DYD1_k127_506877_6 TIGRFAM Diguanylate cyclase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000001563 298.0
DYD1_k127_506877_7 S-adenosyl-l-methionine hydroxide adenosyltransferase K22205 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000001948 264.0
DYD1_k127_506877_8 Located at the back of the 30S subunit body where it stabilizes the conformation of the head with respect to the body K02988 - - 0.0000000000000000000000000000000000000000000000000000000000000000001455 233.0
DYD1_k127_506877_9 Plays an important role in DNA replication, recombination and repair. Binds to ssDNA and to an array of partner proteins to recruit them to their sites of action during DNA metabolism K03111 - - 0.0000000000000000000000000000000000000000000000000000000001598 206.0
DYD1_k127_5120064_0 - - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004971 338.0
DYD1_k127_5120064_1 PFAM Peptidase M48 - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000106 283.0
DYD1_k127_5120064_2 DsrE/DsrF/DrsH-like family - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000001858 255.0
DYD1_k127_5120064_3 - - - - 0.00000000000000000000000000000000000000000000000005305 184.0
DYD1_k127_5120064_4 enzyme of the cupin superfamily K06995 - - 0.0000000000000000000000000000000003738 132.0
DYD1_k127_5120064_5 - - - - 0.0000000000000000000000000000004601 126.0
DYD1_k127_5120064_6 Belongs to the sulfur carrier protein TusA family K04085 - - 0.0000000000000000000000000002108 118.0
DYD1_k127_5120064_8 - - - - 0.000001446 53.0
DYD1_k127_5148471_0 Thiamine pyrophosphate enzyme, central domain K01652 - 2.2.1.6 6.224e-288 892.0
DYD1_k127_5148471_1 Succinyl-CoA synthetase functions in the citric acid cycle (TCA), coupling the hydrolysis of succinyl-CoA to the synthesis of either ATP or GTP and thus represents the only step of substrate-level phosphorylation in the TCA. The beta subunit provides nucleotide specificity of the enzyme and binds the substrate succinate, while the binding sites for coenzyme A and phosphate are found in the alpha subunit K01903 - 6.2.1.5 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004628 574.0
DYD1_k127_5148471_2 acyl-CoA transferases carnitine dehydratase K07749 - 2.8.3.16 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001218 530.0
DYD1_k127_5148471_3 Succinyl-CoA synthetase functions in the citric acid cycle (TCA), coupling the hydrolysis of succinyl-CoA to the synthesis of either ATP or GTP and thus represents the only step of substrate-level phosphorylation in the TCA. The alpha subunit of the enzyme binds the substrates coenzyme A and phosphate, while succinate binding and nucleotide specificity is provided by the beta subunit K01902 - 6.2.1.5 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002015 498.0
DYD1_k127_5148471_4 Tripartite tricarboxylate transporter TctA family K07793 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006529 472.0
DYD1_k127_5148471_5 FCD - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000003814 273.0
DYD1_k127_5148471_6 Tripartite tricarboxylate transporter family receptor K07795 - - 0.00000000000000000000000000000000000000000000000000000000003569 220.0
DYD1_k127_5148471_7 Tripartite tricarboxylate transporter TctB family - - - 0.00000000000000000001469 97.0
DYD1_k127_515675_0 Glutamine synthetase, catalytic domain K01915 - 6.3.1.2 5.929e-215 676.0
DYD1_k127_515675_1 membrane - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007389 574.0
DYD1_k127_515675_2 Dienelactone hydrolase family K01061 - 3.1.1.45 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001631 396.0
DYD1_k127_515675_3 COG4531 ABC-type Zn2 transport system, periplasmic component surface adhesin K09815 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001376 323.0
DYD1_k127_515675_4 Part of the ABC transporter complex ZnuABC involved in zinc import. Responsible for energy coupling to the transport system K09817 GO:0000041,GO:0000166,GO:0003674,GO:0003824,GO:0005215,GO:0005385,GO:0005488,GO:0005524,GO:0006810,GO:0006811,GO:0006812,GO:0006829,GO:0008144,GO:0008150,GO:0008324,GO:0015075,GO:0015318,GO:0015399,GO:0015405,GO:0016462,GO:0016787,GO:0016817,GO:0016818,GO:0016887,GO:0017076,GO:0017111,GO:0022804,GO:0022857,GO:0022890,GO:0030001,GO:0030554,GO:0032553,GO:0032555,GO:0032559,GO:0034220,GO:0035639,GO:0036094,GO:0042623,GO:0042626,GO:0043167,GO:0043168,GO:0043492,GO:0046873,GO:0046915,GO:0051179,GO:0051234,GO:0055085,GO:0070838,GO:0071577,GO:0072509,GO:0072511,GO:0097159,GO:0097367,GO:0098655,GO:0098660,GO:0098662,GO:1901265,GO:1901363 - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009032 317.0
DYD1_k127_515675_5 COG1108 ABC-type Mn2 Zn2 transport systems permease components K09816 GO:0000006,GO:0000041,GO:0003674,GO:0005215,GO:0005385,GO:0005575,GO:0005623,GO:0005886,GO:0006810,GO:0006811,GO:0006812,GO:0006829,GO:0008150,GO:0008324,GO:0010035,GO:0010038,GO:0010043,GO:0015075,GO:0015318,GO:0016020,GO:0022857,GO:0022890,GO:0030001,GO:0034220,GO:0042221,GO:0044464,GO:0046873,GO:0046915,GO:0050896,GO:0051179,GO:0051234,GO:0055085,GO:0070838,GO:0071577,GO:0071944,GO:0072509,GO:0072511,GO:0098655,GO:0098660,GO:0098662 - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000003818 301.0
DYD1_k127_515675_6 PFAM Peptidase C26 K07010 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000005977 253.0
DYD1_k127_515675_7 Peptidase family M23 - - - 0.0000000000000000000000000000000000000000000000000000000000000000000008566 240.0
DYD1_k127_515675_9 Trm112p-like protein - - - 0.000000000000000000000131 102.0
DYD1_k127_5191952_0 Catalyzes the acyloin condensation reaction between C atoms 2 and 3 of pyruvate and glyceraldehyde 3-phosphate to yield 1-deoxy-D-xylulose-5-phosphate (DXP) K01662 - 2.2.1.7 1.238e-275 861.0
DYD1_k127_5191952_1 Converts 2C-methyl-D-erythritol 2,4-cyclodiphosphate (ME-2,4cPP) into 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate K03526 GO:0003674,GO:0003824,GO:0006081,GO:0006082,GO:0006090,GO:0006629,GO:0006644,GO:0006720,GO:0006793,GO:0006796,GO:0008150,GO:0008152,GO:0008299,GO:0008610,GO:0008654,GO:0009058,GO:0009240,GO:0009987,GO:0016491,GO:0016725,GO:0019288,GO:0019637,GO:0019682,GO:0019752,GO:0032787,GO:0043436,GO:0044237,GO:0044238,GO:0044249,GO:0044255,GO:0044281,GO:0046429,GO:0046490,GO:0052592,GO:0055114,GO:0071704,GO:0090407,GO:1901135,GO:1901576 1.17.7.1,1.17.7.3 5.727e-198 622.0
DYD1_k127_5191952_10 COG0790 FOG TPR repeat, SEL1 subfamily K07126 - - 0.00000000000000000000000000000000000000000000121 175.0
DYD1_k127_5191952_11 DsrE/DsrF-like family K06039 - - 0.00000000000000000000000000000000000000000000137 167.0
DYD1_k127_5191952_12 Catalyzes the ATP-dependent phosphorylation of thiamine- monophosphate (TMP) to form thiamine-pyrophosphate (TPP), the active form of vitamin B1 K00946 - 2.7.4.16 0.000000000000000000000000000000000000005271 151.0
DYD1_k127_5191952_13 PFAM Fatty acid hydroxylase - - - 0.000000000002463 75.0
DYD1_k127_5191952_15 CAAX protease self-immunity - - - 0.000001281 59.0
DYD1_k127_5191952_2 oxidoreductase K17218 - 1.8.5.4 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008446 470.0
DYD1_k127_5191952_3 Catalyzes the conversion of 3'-phosphate to a 2',3'- cyclic phosphodiester at the end of RNA. The mechanism of action of the enzyme occurs in 3 steps (A) adenylation of the enzyme by ATP K01974 - 6.5.1.4 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001814 344.0
DYD1_k127_5191952_4 transcriptional regulator, ArsR family - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000002301 287.0
DYD1_k127_5191952_5 Methyltransferase, chemotaxis proteins K00575 - 2.1.1.80 0.000000000000000000000000000000000000000000000000000000000000000000000000000000008451 278.0
DYD1_k127_5191952_6 glutamine amidotransferase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000008758 248.0
DYD1_k127_5191952_7 alpha beta - - - 0.0000000000000000000000000000000000000000000000000000000001156 218.0
DYD1_k127_5191952_8 protein disulfide oxidoreductase activity - - - 0.000000000000000000000000000000000000000000000000002586 188.0
DYD1_k127_5191952_9 Lipid phosphatase which dephosphorylates phosphatidylglycerophosphate (PGP) to phosphatidylglycerol (PG) K01095 - 3.1.3.27 0.0000000000000000000000000000000000000000000000000104 186.0
DYD1_k127_5217116_0 RuBisCO catalyzes two reactions the carboxylation of D- ribulose 1,5-bisphosphate, the primary event in carbon dioxide fixation, as well as the oxidative fragmentation of the pentose substrate. Both reactions occur simultaneously and in competition at the same active site K01601 - 4.1.1.39 1.324e-283 875.0
DYD1_k127_5217116_1 Aminotransferase class-III K00823 - 2.6.1.19 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002268 558.0
DYD1_k127_5217116_2 PFAM Phosphoribulokinase uridine kinase K00855 - 2.7.1.19 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001088 440.0
DYD1_k127_5217116_3 Bacterial regulatory helix-turn-helix protein, lysR family K21703 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001193 383.0
DYD1_k127_5217116_4 oxidoreductase - - - 0.0000000000000000000000000000000000000000000000000000000000004457 218.0
DYD1_k127_5217116_5 PFAM Major Facilitator Superfamily - - - 0.00000000000000000000000000000000000000000000000000002488 196.0
DYD1_k127_5217116_6 PFAM Ribulose bisphosphate carboxylase, small chain K01602 - 4.1.1.39 0.00000000000000000000000000000000000000000000000000006731 188.0
DYD1_k127_5271880_0 Belongs to the peptidase M16 family - - - 5.321e-255 818.0
DYD1_k127_5271880_1 Belongs to the glutamate--cysteine ligase type 1 family. Type 1 subfamily K01919 - 6.3.2.2 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006675 510.0
DYD1_k127_5271880_11 Alpha/beta hydrolase family K07020 - - 0.000000000000000000000000000000000000000003819 159.0
DYD1_k127_5271880_12 diguanylate cyclase - - - 0.00000000000000000000000007423 123.0
DYD1_k127_5271880_13 deoxyhypusine monooxygenase activity - - - 0.00000000000000000003531 100.0
DYD1_k127_5271880_15 Glutaredoxin-like domain (DUF836) - - - 0.000000000000001953 83.0
DYD1_k127_5271880_17 Murein-degrading enzyme that degrades murein glycan strands and insoluble, high-molecular weight murein sacculi, with the concomitant formation of a 1,6-anhydromuramoyl product. Lytic transglycosylases (LTs) play an integral role in the metabolism of the peptidoglycan (PG) sacculus. Their lytic action creates space within the PG sacculus to allow for its expansion as well as for the insertion of various structures such as secretion systems and flagella K18691 GO:0005575,GO:0005623,GO:0009279,GO:0016020,GO:0019867,GO:0030312,GO:0030313,GO:0031975,GO:0044462,GO:0044464,GO:0071944 - 0.000003838 54.0
DYD1_k127_5271880_18 Dienelactone hydrolase family K07020 - - 0.0003775 52.0
DYD1_k127_5271880_2 Dynamin family - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004418 492.0
DYD1_k127_5271880_3 OST-HTH/LOTUS domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007068 400.0
DYD1_k127_5271880_4 Creatinine amidohydrolase K01470 - 3.5.2.10 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000124 368.0
DYD1_k127_5271880_5 Glutathione S-transferase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003046 336.0
DYD1_k127_5271880_6 PFAM SMP-30 Gluconolaconase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002512 332.0
DYD1_k127_5271880_7 MOSC N-terminal beta barrel domain K07140 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000904 255.0
DYD1_k127_5271880_8 Protein of unknown function (DUF1499) - - - 0.0000000000000000000000000000000000000000000000000000000001556 213.0
DYD1_k127_5271880_9 Prolyl oligopeptidase family - - - 0.0000000000000000000000000000000000000000000000000001488 198.0
DYD1_k127_5272811_0 Tetratricopeptide repeat - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009498 419.0
DYD1_k127_5272811_1 Tetratricopeptide repeat - - - 0.00000000000000000000000000000000001702 142.0
DYD1_k127_5272811_2 PFAM MotA TolQ ExbB proton channel K03561 - - 0.0000000000000000000000008789 107.0
DYD1_k127_5272811_3 - - - - 0.0000000000001848 79.0
DYD1_k127_5321985_0 this subunit has chaperone activity. The binding of ATP and its subsequent hydrolysis by HslU are essential for unfolding of protein substrates subsequently hydrolyzed by HslV. HslU recognizes the N-terminal part of its protein substrates and unfolds these before they are guided to HslV for hydrolysis K03667 - - 9.389e-200 630.0
DYD1_k127_5321985_1 Peptide chain release factor 1 directs the termination of translation in response to the peptide chain termination codons UAG and UAA K02835 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006428 482.0
DYD1_k127_5321985_10 Methylates the class 1 translation termination release factors RF1 PrfA and RF2 PrfB on the glutamine residue of the universally conserved GGQ motif K02493 - 2.1.1.297 0.0000000000000000000000000000000000000000000000000000000000000000000000000001562 268.0
DYD1_k127_5321985_11 Part of the MsrPQ system that repairs oxidized periplasmic proteins containing methionine sulfoxide residues (Met-O), using respiratory chain electrons. Thus protects these proteins from oxidative-stress damage caused by reactive species of oxygen and chlorine generated by the host defense mechanisms. MsrPQ is essential for the maintenance of envelope integrity under bleach stress, rescuing a wide series of structurally unrelated periplasmic proteins from methionine oxidation. MsrQ provides electrons for reduction to the reductase catalytic subunit MsrP, using the quinone pool of the respiratory chain K17247 - - 0.00000000000000000000000000000000000000000000000000000000000000000001518 239.0
DYD1_k127_5321985_12 Carbon starvation protein K06200 GO:0005575,GO:0005623,GO:0005886,GO:0005887,GO:0007154,GO:0008150,GO:0009605,GO:0009987,GO:0009991,GO:0016020,GO:0016021,GO:0031224,GO:0031226,GO:0031667,GO:0031668,GO:0031669,GO:0044425,GO:0044459,GO:0044464,GO:0050896,GO:0051716,GO:0071496,GO:0071944 - 0.0000000000000000000000000000000000000000000000000000000000000000000804 252.0
DYD1_k127_5321985_13 E3 Ubiquitin ligase - - - 0.000000000000000000000000000000000000000000000000000000000000005266 228.0
DYD1_k127_5321985_14 Radical SAM superfamily K04069 - 1.97.1.4 0.00000000000000000000000000000000000000000000000000000000005573 215.0
DYD1_k127_5321985_15 Plays a critical role in the incorporation of lipoproteins in the outer membrane after they are released by the LolA protein K02494 GO:0003674,GO:0005488,GO:0005575,GO:0005623,GO:0006807,GO:0008104,GO:0008150,GO:0008152,GO:0008289,GO:0009279,GO:0010876,GO:0016020,GO:0019538,GO:0019867,GO:0030312,GO:0030313,GO:0031975,GO:0033036,GO:0033218,GO:0034613,GO:0042157,GO:0042277,GO:0043170,GO:0044238,GO:0044462,GO:0044464,GO:0044872,GO:0044873,GO:0044874,GO:0051179,GO:0051641,GO:0051668,GO:0070727,GO:0071704,GO:0071723,GO:0071944,GO:0072657,GO:1901564 - 0.00000000000000000000000000000001607 134.0
DYD1_k127_5321985_16 Belongs to the small heat shock protein (HSP20) family K13993 - - 0.000000000000000000000000005157 115.0
DYD1_k127_5321985_17 FAD-dependent monooxygenase required for the C5-ring hydroxylation during ubiquinone biosynthesis. Catalyzes the hydroxylation of 3-polyprenyl-4-hydroxybenzoic acid to 3- polyprenyl-4,5-dihydroxybenzoic acid. The electrons required for the hydroxylation reaction may be funneled indirectly from NADPH via a ferredoxin ferredoxin reductase system to COQ6 - - - 0.00001142 51.0
DYD1_k127_5321985_2 Belongs to the acetylglutamate kinase family. ArgB subfamily K00930 - 2.7.2.8 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009249 450.0
DYD1_k127_5321985_3 Belongs to the peptidase M48B family K03799 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002163 446.0
DYD1_k127_5321985_4 Catalyzes the NADPH-dependent reduction of glutamyl- tRNA(Glu) to glutamate 1-semialdehyde (GSA) K02492 - 1.2.1.70 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008522 449.0
DYD1_k127_5321985_5 Part of the MsrPQ system that repairs oxidized periplasmic proteins containing methionine sulfoxide residues (Met-O), using respiratory chain electrons. Thus protects these proteins from oxidative-stress damage caused by reactive species of oxygen and chlorine generated by the host defense mechanisms. MsrPQ is essential for the maintenance of envelope integrity under bleach stress, rescuing a wide series of structurally unrelated periplasmic proteins from methionine oxidation. The catalytic subunit MsrP is non-stereospecific, being able to reduce both (R-) and (S-) diastereoisomers of methionine sulfoxide K07147 GO:0000302,GO:0001101,GO:0003674,GO:0003824,GO:0005488,GO:0005575,GO:0005623,GO:0006807,GO:0006950,GO:0006979,GO:0008150,GO:0008152,GO:0009987,GO:0010035,GO:0016491,GO:0016667,GO:0016672,GO:0016675,GO:0019538,GO:0030091,GO:0030288,GO:0030313,GO:0031975,GO:0042221,GO:0042597,GO:0043170,GO:0043546,GO:0044237,GO:0044238,GO:0044260,GO:0044267,GO:0044464,GO:0048037,GO:0050662,GO:0050896,GO:0055114,GO:0071704,GO:0097159,GO:1901363,GO:1901530,GO:1901564,GO:1901700 - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002274 426.0
DYD1_k127_5321985_6 Tetratricopeptide repeat - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003902 409.0
DYD1_k127_5321985_7 Catalyzes the phosphorylation of the position 2 hydroxy group of 4-diphosphocytidyl-2C-methyl-D-erythritol K00919 - 2.7.1.148 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000001344 302.0
DYD1_k127_5321985_8 Protease subunit of a proteasome-like degradation complex believed to be a general protein degrading machinery K01419 - 3.4.25.2 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000232 289.0
DYD1_k127_5321985_9 LemA family K03744 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000006465 262.0
DYD1_k127_5322403_0 PFAM NAD-dependent epimerase dehydratase K08679 - 5.1.3.6 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003587 484.0
DYD1_k127_5322403_1 Winged helix-turn-helix DNA-binding - - - 0.0000000000000000000000000000000000000000000000000005728 192.0
DYD1_k127_5322403_2 Enhances distal genes transcription elongation in a specialized subset of operons that encode extracytoplasmic components K05785 - - 0.000000000000000000000000000000000000000000000000007318 188.0
DYD1_k127_5322403_3 Catalyzes the ADP transfer from ATP to D-glycero-beta-D- manno-heptose 1-phosphate, yielding ADP-D-glycero-beta-D-manno- heptose K03272 - 2.7.1.167,2.7.7.70 0.00000000000000000000000000000000000000008668 155.0
DYD1_k127_5322403_4 Belongs to the mannose-6-phosphate isomerase type 2 family K16011 - 2.7.7.13,5.3.1.8 0.000000000000000000000000000005648 120.0
DYD1_k127_5344348_0 mandelate racemase muconate lactonizing - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009241 523.0
DYD1_k127_5344348_1 PFAM Phenazine biosynthesis PhzC PhzF protein K06998 - 5.3.3.17 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007988 371.0
DYD1_k127_5344348_10 Acetyltransferase (GNAT) domain - - - 0.00000000000000000000001013 105.0
DYD1_k127_5344348_2 Ornithine cyclodeaminase/mu-crystallin family K21721 - 1.5.1.51 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005424 318.0
DYD1_k127_5344348_3 Belongs to the ComB family K05979 - 3.1.3.71 0.0000000000000000000000000000000000000000000000000000000001401 211.0
DYD1_k127_5344348_4 COG0318 Acyl-CoA synthetases (AMP-forming) AMP-acid ligases II K00666 - - 0.0000000000000000000000000000000000000000000000000004628 185.0
DYD1_k127_5344348_5 - - - - 0.0000000000000000000000000000000000000000000000000009317 189.0
DYD1_k127_5344348_6 LexA-binding, inner membrane-associated putative hydrolase K07038 GO:0005575,GO:0005623,GO:0005886,GO:0016020,GO:0044464,GO:0071944 - 0.000000000000000000000000000000000000008752 151.0
DYD1_k127_5344348_7 COG0454 Histone acetyltransferase HPA2 and related acetyltransferases - - - 0.000000000000000000000000000000000000016 152.0
DYD1_k127_5344348_8 Acetyltransferase (GNAT) domain - - - 0.0000000000000000000000000000000006042 136.0
DYD1_k127_5344348_9 Acetyltransferase (GNAT) domain - GO:0003674,GO:0003824,GO:0008080,GO:0016407,GO:0016410,GO:0016740,GO:0016746,GO:0016747 - 0.000000000000000000000000000000000758 132.0
DYD1_k127_5437074_0 Cytochrome C and Quinol oxidase polypeptide I - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002312 439.0
DYD1_k127_5437074_1 oxygen carrier activity K07216 - - 0.0000000000000001988 83.0
DYD1_k127_5473702_0 Protein of unknown function (DUF3014) - - - 0.00000000000000000000000000000000000000000000000000000000000000006271 230.0
DYD1_k127_5473702_1 Belongs to the UPF0234 family K09767 - - 0.0000000000000000000000000000000000000000000000000000000353 201.0
DYD1_k127_5473702_2 Protein of unknown function, DUF - - - 0.00000000000000000000000000000000000000000195 162.0
DYD1_k127_5473702_3 Hemerythrin HHE cation binding domain - - - 0.00000000000000000000000001486 114.0
DYD1_k127_5473702_4 - - - - 0.00000000000000001934 87.0
DYD1_k127_5473702_5 PFAM Hemerythrin HHE cation binding domain K07216 - - 0.00000000000000004343 87.0
DYD1_k127_5473702_6 regulation of response to stimulus K13730 - - 0.00000000000003627 86.0
DYD1_k127_5473702_7 response to cobalt ion - - - 0.000000002647 64.0
DYD1_k127_5473702_8 Hep Hag repeat protein - - - 0.000007478 59.0
DYD1_k127_5486911_0 Catalyzes the synthesis of the hydroxymethylpyrimidine phosphate (HMP-P) moiety of thiamine from aminoimidazole ribotide (AIR) in a radical S-adenosyl-L-methionine (SAM)-dependent reaction K03147 - 4.1.99.17 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004983 424.0
DYD1_k127_5486911_1 Ribosomal RNA adenine dimethylase K00573 - 2.1.1.77 0.000000000000000000000000000000000000000000000000000000000000000000000000005021 259.0
DYD1_k127_5486911_2 PFAM Rhodanese domain protein - - - 0.000000000000000000000000000007618 122.0
DYD1_k127_5510305_0 ABC-type Fe3 transport system permease component K02011 - - 7.346e-226 716.0
DYD1_k127_5510305_1 Part of the ABC transporter complex PotABCD involved in spermidine putrescine import. Responsible for energy coupling to the transport system K02010,K02052 - 3.6.3.30 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006813 459.0
DYD1_k127_5510305_10 spore germination - - - 0.000000000000000000000000000000000000000000000000000000000000000133 231.0
DYD1_k127_5510305_11 Carboxypeptidase regulatory-like domain - - - 0.000000000000000000000000000000000000000000000000000000008308 206.0
DYD1_k127_5510305_2 Bacterial extracellular solute-binding protein K02012 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008117 438.0
DYD1_k127_5510305_3 Fatty acid desaturase K10255 - 1.14.19.23,1.14.19.45 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003505 424.0
DYD1_k127_5510305_4 Belongs to the D-glutamate cyclase family - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002556 342.0
DYD1_k127_5510305_5 oxidoreductase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006644 327.0
DYD1_k127_5510305_6 ATPases associated with a variety of cellular activities K01996 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000004256 287.0
DYD1_k127_5510305_7 Branched-chain amino acid ATP-binding cassette transporter K01995 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000003406 267.0
DYD1_k127_5510305_8 COG0483 Archaeal fructose-1,6-bisphosphatase and related enzymes of inositol monophosphatase family K01092,K18649 - 3.1.3.15,3.1.3.25,3.1.3.93 0.0000000000000000000000000000000000000000000000000000000000000000000000000002337 264.0
DYD1_k127_5510305_9 PFAM Mandelate racemase muconate lactonizing enzyme, C-terminal - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000001793 265.0
DYD1_k127_5551739_0 GTP-binding protein TypA K06207 - - 5.959e-286 891.0
DYD1_k127_5551739_1 Protein of unknown function (DUF1722) - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001596 395.0
DYD1_k127_5551739_2 GDSL-like Lipase/Acylhydrolase family - - - 0.0000000000000000000000000000000000000000000000000000000003897 210.0
DYD1_k127_5551739_3 Type II transport protein GspH K08084 - - 0.000000000000000007498 93.0
DYD1_k127_5551739_4 Ankyrin repeats (many copies) K21440 GO:0006810,GO:0008150,GO:0016192,GO:0016197,GO:0046907,GO:0051179,GO:0051234,GO:0051641,GO:0051649,GO:0098876,GO:1990126 - 0.00000000000000008729 86.0
DYD1_k127_5551739_5 Protein of unknown function (DUF3014) - - - 0.00000000000001481 74.0
DYD1_k127_5551739_6 - - - - 0.0000093 58.0
DYD1_k127_5553717_0 Converts GTP to 7,8-dihydroneopterin triphosphate K09007 - 3.5.4.16 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008618 409.0
DYD1_k127_5553717_1 Belongs to the FPP GGPP synthase family K00795,K13789 - 2.5.1.1,2.5.1.10,2.5.1.29 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004139 327.0
DYD1_k127_5553717_2 Catalyzes the attachment of proline to tRNA(Pro) in a two-step reaction proline is first activated by ATP to form Pro- AMP and then transferred to the acceptor end of tRNA(Pro). As ProRS can inadvertently accommodate and process non-cognate amino acids such as alanine and cysteine, to avoid such errors it has two additional distinct editing activities against alanine. One activity is designated as 'pretransfer' editing and involves the tRNA(Pro)-independent hydrolysis of activated Ala-AMP. The other activity is designated 'posttransfer' editing and involves deacylation of mischarged Ala-tRNA(Pro). The misacylated Cys- tRNA(Pro) is not edited by ProRS K01881 GO:0002161,GO:0003674,GO:0003824,GO:0004812,GO:0004827,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006082,GO:0006139,GO:0006399,GO:0006412,GO:0006418,GO:0006433,GO:0006450,GO:0006518,GO:0006520,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0016070,GO:0016787,GO:0016788,GO:0016874,GO:0016875,GO:0019538,GO:0019752,GO:0034641,GO:0034645,GO:0034660,GO:0043038,GO:0043039,GO:0043043,GO:0043170,GO:0043436,GO:0043603,GO:0043604,GO:0043906,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044281,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0052689,GO:0065007,GO:0065008,GO:0071704,GO:0090304,GO:0106074,GO:0140098,GO:0140101,GO:1901360,GO:1901564,GO:1901566,GO:1901576 6.1.1.15 0.000000000000000000000000000000000000000000008079 165.0
DYD1_k127_5553717_3 Clan AA aspartic protease K06985 - - 0.000000000000000000000000000000000000000009299 163.0
DYD1_k127_5553717_4 Belongs to the N-Me-Phe pilin family K02650 - - 0.00000000000000000007672 94.0
DYD1_k127_5553717_5 Bidirectionally degrades single-stranded DNA into large acid-insoluble oligonucleotides, which are then degraded further into small acid-soluble oligonucleotides K03602 GO:0003674,GO:0003824,GO:0004518,GO:0004527,GO:0004529,GO:0004536,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006139,GO:0006259,GO:0006308,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0008855,GO:0009056,GO:0009057,GO:0009318,GO:0009987,GO:0016787,GO:0016788,GO:0016796,GO:0016895,GO:0019439,GO:0032991,GO:0034641,GO:0034655,GO:0043170,GO:0044237,GO:0044238,GO:0044248,GO:0044260,GO:0044265,GO:0044270,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0046700,GO:0071704,GO:0090304,GO:0090305,GO:0140097,GO:1901360,GO:1901361,GO:1901575,GO:1902494 3.1.11.6 0.00000000000001394 76.0
DYD1_k127_5553924_0 Catalyzes cross-linking of the peptidoglycan cell wall K05515 - 3.4.16.4 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005481 544.0
DYD1_k127_5553924_1 Peptidoglycan polymerase that is essential for cell wall elongation K05837 GO:0005575,GO:0005623,GO:0005886,GO:0008150,GO:0008360,GO:0016020,GO:0022603,GO:0022604,GO:0044464,GO:0050789,GO:0050793,GO:0050794,GO:0051128,GO:0065007,GO:0065008,GO:0071944 - 0.0000000000000000000000000000000000000000000000000000000348 202.0
DYD1_k127_5573449_0 Catalyzes the hydrolysis of N-succinyl-L,L- diaminopimelic acid (SDAP), forming succinate and LL-2,6- diaminoheptanedioate (DAP), an intermediate involved in the bacterial biosynthesis of lysine and meso-diaminopimelic acid, an essential component of bacterial cell walls K01439 - 3.5.1.18 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001436 557.0
DYD1_k127_5573449_1 acyl-CoA dehydrogenase K00249 - 1.3.8.7 0.00000000007037 64.0
DYD1_k127_5579788_0 PAS fold - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000002675 309.0
DYD1_k127_5579788_1 aerobic electron transport chain K00425,K08738 - 1.10.3.14 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000001119 289.0
DYD1_k127_5579788_2 Two component transcriptional regulator, LuxR family K14987 - - 0.0000000000000000000000000000000000000000000000000000000008172 209.0
DYD1_k127_5579788_3 Cytochrome c, class I - - - 0.000000000000000000000000000000000000000000006648 171.0
DYD1_k127_5579788_4 - - - - 0.00000000000000000000000000000000000000002012 157.0
DYD1_k127_5579788_5 Cytochrome C oxidase, cbb3-type, subunit III - - - 0.000000000000000000000007793 105.0
DYD1_k127_5583547_0 DAHP synthetase I family K03856 - 2.5.1.54 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002351 582.0
DYD1_k127_5583547_1 Belongs to the citrate synthase family K01647 - 2.3.3.1 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006129 567.0
DYD1_k127_5583547_10 This protein is located at the 30S-50S ribosomal subunit interface and may play a role in the structure and function of the aminoacyl-tRNA binding site K02884 - - 0.00000000000000000000000000000000000000000004227 169.0
DYD1_k127_5583547_11 An accessory protein needed during the final step in the assembly of 30S ribosomal subunit, possibly for assembly of the head region. Probably interacts with S19. Essential for efficient processing of 16S rRNA. May be needed both before and after RbfA during the maturation of 16S rRNA. It has affinity for free ribosomal 30S subunits but not for 70S ribosomes K02860 - - 0.000000000000000000000000000000000000000003105 161.0
DYD1_k127_5583547_12 Belongs to the bacterial ribosomal protein bS16 family K02959 GO:0000028,GO:0000217,GO:0000400,GO:0003674,GO:0003676,GO:0003677,GO:0003735,GO:0003824,GO:0004518,GO:0004519,GO:0004520,GO:0004536,GO:0005198,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0006139,GO:0006259,GO:0006412,GO:0006518,GO:0006725,GO:0006807,GO:0006996,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0015935,GO:0016043,GO:0016787,GO:0016788,GO:0019538,GO:0022607,GO:0022613,GO:0022618,GO:0022626,GO:0022627,GO:0032991,GO:0034622,GO:0034641,GO:0034645,GO:0042254,GO:0042255,GO:0042274,GO:0043043,GO:0043170,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043603,GO:0043604,GO:0043933,GO:0044085,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:0046483,GO:0065003,GO:0070925,GO:0071704,GO:0071826,GO:0071840,GO:0090304,GO:0090305,GO:0097159,GO:0140097,GO:1901360,GO:1901363,GO:1901564,GO:1901566,GO:1901576,GO:1990904 - 0.0000000000000000000000001262 110.0
DYD1_k127_5583547_2 Carbon-nitrogen hydrolase K12251 - 3.5.1.53 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001858 432.0
DYD1_k127_5583547_3 Belongs to the agmatine deiminase family - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006701 424.0
DYD1_k127_5583547_4 TIGRFAM Tyrosine recombinase XerD K04763 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001284 391.0
DYD1_k127_5583547_5 Protein of unknown function (DUF1015) - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003264 390.0
DYD1_k127_5583547_6 Belongs to the RNA methyltransferase TrmD family K00554 GO:0000287,GO:0001510,GO:0002939,GO:0003674,GO:0003824,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006139,GO:0006396,GO:0006399,GO:0006400,GO:0006725,GO:0006807,GO:0008033,GO:0008150,GO:0008152,GO:0008168,GO:0008173,GO:0008175,GO:0008757,GO:0009019,GO:0009451,GO:0009987,GO:0010467,GO:0016070,GO:0016423,GO:0016740,GO:0016741,GO:0016772,GO:0016779,GO:0030488,GO:0032259,GO:0034470,GO:0034641,GO:0034660,GO:0042802,GO:0043167,GO:0043169,GO:0043170,GO:0043412,GO:0043414,GO:0044237,GO:0044238,GO:0044260,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0046872,GO:0050518,GO:0052906,GO:0070567,GO:0071704,GO:0090304,GO:0140098,GO:0140101,GO:1901360 2.1.1.228 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001471 333.0
DYD1_k127_5583547_7 ABC-type Fe3 -hydroxamate transport system, periplasmic component K02016 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001718 315.0
DYD1_k127_5583547_9 PFAM alkyl hydroperoxide reductase Thiol specific antioxidant Mal allergen K03564 - 1.11.1.15 0.0000000000000000000000000000000000000000000000000001634 194.0
DYD1_k127_5612037_0 TIGRFAM penicillin-binding protein, 1A K05366 - 2.4.1.129,3.4.16.4 2.502e-254 812.0
DYD1_k127_5612037_1 TIGRFAM type IV pilus assembly protein PilM K02662 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004285 407.0
DYD1_k127_5612037_2 type IV pilus secretin PilQ K02666 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002625 342.0
DYD1_k127_5612037_3 Pilus assembly protein, PilO K02664 - - 0.00000000000000000000000000000000000000000000000000000003005 203.0
DYD1_k127_5612037_4 mRNA catabolic process - - - 0.00000000000000000000000000000000000000000000000006245 184.0
DYD1_k127_5612037_5 PFAM Fimbrial assembly K02663 - - 0.0000000000000000000000000000000000000000000001995 177.0
DYD1_k127_5612037_6 pilus assembly protein pilp K02665 - - 0.0000000000000000000000000000000000004396 145.0
DYD1_k127_5621499_0 ribosomal large subunit export from nucleus - - - 0.0000000000000000000000000000000000000000000000000000000000001297 219.0
DYD1_k127_5621499_1 - - - - 0.000000000000000000000000002634 120.0
DYD1_k127_5621499_2 Dodecin K09165 GO:0005575,GO:0005618,GO:0005623,GO:0005886,GO:0016020,GO:0030312,GO:0044464,GO:0071944 - 0.00000000000000000000001876 101.0
DYD1_k127_5621499_3 ChaB K06197 - - 0.000000000000000000001403 96.0
DYD1_k127_5621499_4 Amino acid permease - - - 0.00000000007037 64.0
DYD1_k127_5621499_5 PilZ domain - - - 0.000004971 55.0
DYD1_k127_5621499_6 PilZ domain - - - 0.00004446 49.0
DYD1_k127_5631035_0 TIGRFAM ATP-dependent helicase HrpA K03578 - 3.6.4.13 0.0 1419.0
DYD1_k127_5631035_1 COG1788 Acyl CoA acetate 3-ketoacid CoA transferase, alpha subunit K01039 - 2.8.3.12 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003978 371.0
DYD1_k127_5631035_2 COG2057 Acyl CoA acetate 3-ketoacid CoA transferase, beta subunit K01040 - 2.8.3.12 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005714 361.0
DYD1_k127_5631035_3 PFAM Uncharacterised protein family UPF0118 - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002559 333.0
DYD1_k127_5631035_4 With LigD forms a non-homologous end joining (NHEJ) DNA repair enzyme, which repairs dsDNA breaks with reduced fidelity. Binds linear dsDNA with 5'- and 3'- overhangs but not closed circular dsDNA nor ssDNA. Recruits and stimulates the ligase activity of LigD K10979 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002339 307.0
DYD1_k127_5631035_5 Protein of unknown function DUF72 - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000001364 275.0
DYD1_k127_5631035_6 pteridine-dependent deoxygenase K18240 - 4.1.3.40,4.1.3.45 0.00000000000000000000000000000000000000000000000000000000000000007851 235.0
DYD1_k127_5631035_7 Tetratricopeptide repeat - - - 0.0000000000000000000000000000000000000000000000000000000000000004677 229.0
DYD1_k127_5631035_8 ATP-dependent DNA ligase K01971 - 6.5.1.1 0.0000000000000000000000000001074 117.0
DYD1_k127_5650631_0 Transposase and inactivated derivatives - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000476 553.0
DYD1_k127_5650631_1 IstB-like ATP binding protein - - - 0.00000000000000000000000000000000000000000000000000000000000000005511 233.0
DYD1_k127_5650631_2 Phosphoserine phosphatase - - - 0.0000000000000000000000000000000000001486 146.0
DYD1_k127_5650631_3 Transposase IS200 like - - - 0.0000924 48.0
DYD1_k127_5657386_0 Amidohydrolase family K01465 - 3.5.2.3 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002703 597.0
DYD1_k127_5657386_1 Part of the Sec protein translocase complex. Interacts with the SecYEG preprotein conducting channel. SecDF uses the proton motive force (PMF) to complete protein translocation after the ATP-dependent function of SecA K03072 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003629 606.0
DYD1_k127_5657386_10 Deoxynucleoside kinase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000001083 257.0
DYD1_k127_5657386_11 Carboxylesterase K06999 - - 0.000000000000000000000000000000000000000000000000000000000000000000000002127 253.0
DYD1_k127_5657386_12 PFAM Thioredoxin K05838 - - 0.000000000000000000000000000000000000000000000000000000000000000001183 238.0
DYD1_k127_5657386_13 COG3706 Response regulator containing a CheY-like receiver domain and a GGDEF domain - - - 0.000000000000000000000000000000000000000000000000000000000000000002121 241.0
DYD1_k127_5657386_14 6-pyruvoyl tetrahydropterin synthase K01737 - 4.1.2.50,4.2.3.12 0.000000000000000000000000000000000000000000000000001324 189.0
DYD1_k127_5657386_15 Transcription factor that acts by binding directly to the RNA polymerase (RNAP). Required for negative regulation of rRNA expression and positive regulation of several amino acid biosynthesis promoters. Also required for regulation of fis expression K06204 - - 0.0000000000000000000000000000000000000000000000000747 183.0
DYD1_k127_5657386_16 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase (HPPK) K00950 - 2.7.6.3 0.0000000000000000000000000000000000000000002576 169.0
DYD1_k127_5657386_17 Preprotein translocase, YajC subunit K03210 - - 0.000000000000000000000000000000000000003553 149.0
DYD1_k127_5657386_18 - - - - 0.00000000000000000000000000001081 122.0
DYD1_k127_5657386_19 Involved in mRNA degradation. Catalyzes the phosphorolysis of single-stranded polyribonucleotides processively in the 3'- to 5'-direction K00962 - 2.7.7.8 0.00000000000000000004696 90.0
DYD1_k127_5657386_2 Catalyzes the base-exchange of a guanine (G) residue with the queuine precursor 7-aminomethyl-7-deazaguanine (PreQ1) at position 34 (anticodon wobble position) in tRNAs with GU(N) anticodons (tRNA-Asp, -Asn, -His and -Tyr). Catalysis occurs through a double-displacement mechanism. The nucleophile active site attacks the C1' of nucleotide 34 to detach the guanine base from the RNA, forming a covalent enzyme-RNA intermediate. The proton acceptor active site deprotonates the incoming PreQ1, allowing a nucleophilic attack on the C1' of the ribose to form the product. After dissociation, two additional enzymatic reactions on the tRNA convert PreQ1 to queuine (Q), resulting in the hypermodified nucleoside queuosine (7-(((4,5-cis-dihydroxy-2- cyclopenten-1-yl)amino)methyl)-7-deazaguanosine) K00773 - 2.4.2.29 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003147 532.0
DYD1_k127_5657386_20 Ankyrin repeat protein - - - 0.000000000003744 74.0
DYD1_k127_5657386_3 Adds poly(A) tail to the 3' end of many RNAs, which usually targets these RNAs for decay. Plays a significant role in the global control of gene expression, through influencing the rate of transcript degradation, and in the general RNA quality control K00970 - 2.7.7.19 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001496 501.0
DYD1_k127_5657386_4 PFAM aminotransferase, class I - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001999 445.0
DYD1_k127_5657386_5 Transfers and isomerizes the ribose moiety from AdoMet to the 7-aminomethyl group of 7-deazaguanine (preQ1-tRNA) to give epoxyqueuosine (oQ-tRNA) K07568 - 2.4.99.17 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008839 380.0
DYD1_k127_5657386_6 PFAM Alpha beta hydrolase K07019 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001344 375.0
DYD1_k127_5657386_7 Catalyzes the reversible reaction in which hydroxymethyl group from 5,10-methylenetetrahydrofolate is transferred onto alpha-ketoisovalerate to form ketopantoate K00606 - 2.1.2.11 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002488 342.0
DYD1_k127_5657386_8 Part of the Sec protein translocase complex. Interacts with the SecYEG preprotein conducting channel. SecDF uses the proton motive force (PMF) to complete protein translocation after the ATP-dependent function of SecA K03074 GO:0005575,GO:0005623,GO:0005886,GO:0005887,GO:0006810,GO:0008104,GO:0008150,GO:0015031,GO:0015833,GO:0016020,GO:0016021,GO:0031224,GO:0031226,GO:0033036,GO:0042886,GO:0044425,GO:0044459,GO:0044464,GO:0045184,GO:0051179,GO:0051234,GO:0071702,GO:0071705,GO:0071944 - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008271 338.0
DYD1_k127_5657386_9 Catalyzes the dephosphorylation of undecaprenyl diphosphate (UPP). Confers resistance to bacitracin K06153 - 3.6.1.27 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000003217 303.0
DYD1_k127_5674446_0 Na+ dependent nucleoside transporter N-terminus K03317 GO:0003674,GO:0005215,GO:0005337,GO:0005575,GO:0005623,GO:0005886,GO:0005887,GO:0006810,GO:0008150,GO:0015858,GO:0015931,GO:0015932,GO:0016020,GO:0016021,GO:0022857,GO:0031224,GO:0031226,GO:0044425,GO:0044459,GO:0044464,GO:0051179,GO:0051234,GO:0055085,GO:0071702,GO:0071705,GO:0071944,GO:1901264,GO:1901505,GO:1901642 - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006643 465.0
DYD1_k127_5674446_1 Thiol-disulfide isomerase and thioredoxins - - - 0.0000000000000000000000000000000000000000000000000000000000001297 219.0
DYD1_k127_5674446_2 Thioredoxin-like domain - - - 0.0000000000000000000000000000000000000000000000000000000001784 211.0
DYD1_k127_5674446_3 Haem-degrading - - - 0.0000000000000000000000000000000000000000000000000004017 190.0
DYD1_k127_5674446_4 Thioesterase K07107 - - 0.000000000000000000000000000000000000001806 152.0
DYD1_k127_5674446_5 Sulfur oxidation protein SoxY K17226 - - 0.000000000000000000000000000002253 127.0
DYD1_k127_5674446_6 oxidation protein K17227 - - 0.00000000000000003765 85.0
DYD1_k127_5676556_0 Amidohydrolase K07045 - - 1.511e-240 752.0
DYD1_k127_5676556_1 Type II/IV secretion system protein K02669 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000002727 263.0
DYD1_k127_5676556_2 Ceramidase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000002511 246.0
DYD1_k127_5676556_3 Haloacid dehalogenase-like hydrolase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000007357 246.0
DYD1_k127_5676556_4 Evidence 4 Homologs of previously reported genes of K09700 - - 0.000000000000000000000000000000000000000000000000349 176.0
DYD1_k127_5676556_5 - - - - 0.00000000000000000000000000000000001 138.0
DYD1_k127_5676556_6 PIN domain K07175 - - 0.000000000000000000000000007475 109.0
DYD1_k127_5676556_7 membrane - - - 0.0000000000000000000000002078 108.0
DYD1_k127_5715992_0 NADH-quinone oxidoreductase, chain M K00342 - 1.6.5.3 4.29e-209 663.0
DYD1_k127_5715992_1 NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient K00343 - 1.6.5.3 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005178 556.0
DYD1_k127_5715992_2 Phosphoesterase K07095 - - 0.000000000000000000000000000000000000000000000000000004808 196.0
DYD1_k127_5715992_3 Proton-translocating NADH-quinone oxidoreductase, chain L K00341 - 1.6.5.3 0.0000000000000000000000000000000000001377 144.0
DYD1_k127_5715992_4 - - - - 0.00000002535 55.0
DYD1_k127_5718601_0 Pfam SNARE associated Golgi protein - - - 0.000000000000000000000000000000000000000000000000000000000000102 220.0
DYD1_k127_5718601_1 - - - - 0.00000000000000000000000002958 110.0
DYD1_k127_5718601_2 - - - - 0.0000008146 58.0
DYD1_k127_5721842_0 Produces ATP from ADP in the presence of a proton gradient across the membrane. The V-type alpha chain is a catalytic subunit K02117 - 3.6.3.14,3.6.3.15 0.0000000000000000000000000000000000000000000000000000000000000000001355 235.0
DYD1_k127_5721842_1 - - - - 0.000000000000000000000002318 114.0
DYD1_k127_5721842_2 Belongs to the V-ATPase proteolipid subunit family K02124 - - 0.0000000000000000000116 98.0
DYD1_k127_5721842_3 Belongs to the V-ATPase 116 kDa subunit family K02123 - - 0.00000000000000002285 82.0
DYD1_k127_5721842_4 ATP synthase (F/14-kDa) subunit - - - 0.0000000000000009189 80.0
DYD1_k127_5783205_0 Presumably involved in the processing and regular turnover of intracellular proteins. Catalyzes the removal of unsubstituted N-terminal amino acids from various peptides K01255 - 3.4.11.1 3.581e-205 649.0
DYD1_k127_5783205_1 DNA polymerase III, chi subunit K02339 - 2.7.7.7 0.00000000000000000000000000000000001408 139.0
DYD1_k127_5783205_2 Permease YjgP YjgQ family K07091 - - 0.0000000000000000001439 93.0
DYD1_k127_5838972_0 Catalyzes the condensation of (S)-aspartate-beta- semialdehyde (S)-ASA and pyruvate to 4-hydroxy- tetrahydrodipicolinate (HTPA) K01714 GO:0003674,GO:0003824,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006082,GO:0006520,GO:0006553,GO:0006807,GO:0008150,GO:0008152,GO:0008652,GO:0008840,GO:0009058,GO:0009066,GO:0009067,GO:0009085,GO:0009089,GO:0009987,GO:0016053,GO:0016829,GO:0016835,GO:0016836,GO:0019752,GO:0019877,GO:0042802,GO:0043436,GO:0043648,GO:0043650,GO:0044237,GO:0044238,GO:0044249,GO:0044281,GO:0044283,GO:0044424,GO:0044444,GO:0044464,GO:0046394,GO:0046451,GO:0071704,GO:1901564,GO:1901566,GO:1901576,GO:1901605,GO:1901607 4.3.3.7 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001312 404.0
DYD1_k127_5838972_1 Phosphoribosylformylglycinamidine synthase involved in the purines biosynthetic pathway. Catalyzes the ATP-dependent conversion of formylglycinamide ribonucleotide (FGAR) and glutamine to yield formylglycinamidine ribonucleotide (FGAM) and glutamate K01952 - 6.3.5.3 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001392 396.0
DYD1_k127_5838972_2 NlpB/DapX lipoprotein K07287 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000002869 263.0
DYD1_k127_5838972_3 PFAM Glucose Sorbosone dehydrogenase - - - 0.0000000000000000000000000000000000000000000000000005284 190.0
DYD1_k127_5849144_0 Cytochrome D1 heme domain K15864 - 1.7.2.1,1.7.99.1 3.989e-293 908.0
DYD1_k127_5849144_1 cytochrome d1, heme region K19345 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003565 574.0
DYD1_k127_5849144_10 Cytochrome C and Quinol oxidase polypeptide I - - - 0.0000000000000000000002196 99.0
DYD1_k127_5849144_2 FMN-binding domain protein K19339 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004856 544.0
DYD1_k127_5849144_3 Radical SAM - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003041 348.0
DYD1_k127_5849144_4 COG1522 Transcriptional regulators - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001731 330.0
DYD1_k127_5849144_5 - - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001992 314.0
DYD1_k127_5849144_6 transcriptional regulator AsnC family - - - 0.0000000000000000000000000000000000000000000000000000000000000000000002839 243.0
DYD1_k127_5849144_7 heme biosynthesis protein - - - 0.00000000000000000000000000000000000000000000000000000000000001069 218.0
DYD1_k127_5849144_8 Cytochrome C oxidase, cbb3-type, subunit III - - - 0.00000000000000000000000000000000000000000000000000000000000004394 222.0
DYD1_k127_5849144_9 Cytochrome C oxidase, cbb3-type, subunit III K19344 - - 0.000000000000000000000000001051 115.0
DYD1_k127_5853180_0 Malic enzyme, NAD binding domain K00029 - 1.1.1.40 4e-323 1004.0
DYD1_k127_5853180_1 ABC-type dipeptide transport system, periplasmic component K02035 - - 2.903e-226 715.0
DYD1_k127_5853180_10 Helix-turn-helix XRE-family like proteins K18831 - - 0.00000000000000000000000000000000004817 138.0
DYD1_k127_5853180_11 protein conserved in bacteria K19166 - - 0.00000000000000005729 84.0
DYD1_k127_5853180_12 Bacterial antitoxin of type II TA system, VapB - - - 0.00000000000000255 79.0
DYD1_k127_5853180_2 COG0604 NADPH quinone reductase and related Zn-dependent oxidoreductases K00344 - 1.6.5.5 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001553 492.0
DYD1_k127_5853180_3 COG0601 ABC-type dipeptide oligopeptide nickel transport systems, permease components K02033 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009695 464.0
DYD1_k127_5853180_4 Binding-protein-dependent transport system inner membrane component - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002017 447.0
DYD1_k127_5853180_5 Oligopeptide/dipeptide transporter, C-terminal region - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005949 421.0
DYD1_k127_5853180_6 COG0494 NTP pyrophosphohydrolases including oxidative damage repair enzymes - - - 0.00000000000000000000000000000000000000000000000000000000004549 213.0
DYD1_k127_5853180_7 Redoxin domain protein - - - 0.000000000000000000000000000000000000000000000000000000000524 212.0
DYD1_k127_5853180_8 Adenylate and Guanylate cyclase catalytic domain - - - 0.00000000000000000000000000000000000000000000000000000005003 201.0
DYD1_k127_5853180_9 Toxic component of a toxin-antitoxin (TA) module. An RNase K07064 - - 0.00000000000000000000000000000000000000000000000000000005455 201.0
DYD1_k127_5855484_0 Fic/DOC family - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006007 365.0
DYD1_k127_5855484_1 DinB superfamily - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000006874 255.0
DYD1_k127_5855484_10 - - - - 0.00000000000002491 84.0
DYD1_k127_5855484_12 type I restriction modification DNA specificity domain K01154 - 3.1.21.3 0.000000007515 61.0
DYD1_k127_5855484_13 PFAM N-6 DNA methylase K03427 - 2.1.1.72 0.0007114 47.0
DYD1_k127_5855484_2 Belongs to the 'phage' integrase family - - - 0.00000000000000000000000000000000000000000000000000000000000000009572 225.0
DYD1_k127_5855484_3 - - - - 0.000000000000000000000000000000000000000000000000000000000000000128 238.0
DYD1_k127_5855484_4 Membrane - - - 0.000000000000000000000000000000000000000000000000000000003092 215.0
DYD1_k127_5855484_5 Belongs to the peptidase S8 family - - - 0.00000000000000000000000000000000000000008905 157.0
DYD1_k127_5855484_6 PFAM Cyclic nucleotide-binding - - - 0.0000000000000000000000000000000000000002555 163.0
DYD1_k127_5855484_8 Prevents misfolding and promotes the refolding and proper assembly of unfolded polypeptides generated under stress conditions K04077 - - 0.00000000000000000000000000002271 118.0
DYD1_k127_5855484_9 Could be involved in insertion of integral membrane proteins into the membrane K08998 GO:0003674,GO:0005215,GO:0005575,GO:0005623,GO:0005886,GO:0005887,GO:0006810,GO:0008104,GO:0008150,GO:0008565,GO:0009987,GO:0015031,GO:0015833,GO:0016020,GO:0016021,GO:0016043,GO:0031224,GO:0031226,GO:0032977,GO:0033036,GO:0034613,GO:0042886,GO:0044425,GO:0044459,GO:0044464,GO:0045184,GO:0051179,GO:0051205,GO:0051234,GO:0051641,GO:0061024,GO:0070727,GO:0071702,GO:0071705,GO:0071840,GO:0071944,GO:0072657,GO:0090150 - 0.000000000000000001179 89.0
DYD1_k127_585860_0 ABC transporter K06147,K11004 - - 1.79e-265 835.0
DYD1_k127_585860_1 HlyD membrane-fusion protein of T1SS K02022,K11003 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001015 412.0
DYD1_k127_585860_2 Haemolysin-type calcium-binding repeat (2 copies) K11005,K11029 GO:0001906,GO:0003674,GO:0003824,GO:0004016,GO:0005575,GO:0005576,GO:0006873,GO:0006874,GO:0006875,GO:0007204,GO:0008150,GO:0009975,GO:0009987,GO:0016829,GO:0016849,GO:0019725,GO:0019835,GO:0030003,GO:0031640,GO:0035821,GO:0042592,GO:0044179,GO:0044364,GO:0044419,GO:0044764,GO:0048878,GO:0050801,GO:0051480,GO:0051704,GO:0051715,GO:0055065,GO:0055074,GO:0055080,GO:0055082,GO:0065007,GO:0065008,GO:0072503,GO:0072507,GO:0098771 4.6.1.1 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004195 378.0
DYD1_k127_585860_3 Phosphatidylethanolamine-binding protein K06910 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002448 314.0
DYD1_k127_585860_4 - - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000002035 260.0
DYD1_k127_585860_5 ACP hemolysin acyltransferase (Hemolysin-activating protein) K07389 - - 0.000000000000000000000000000000000000000009097 159.0
DYD1_k127_585860_6 acetyltransferase - - - 0.000000000000000000000000000001475 128.0
DYD1_k127_585860_7 radical SAM domain protein K04070 - 1.97.1.4 0.0000000000000152 75.0
DYD1_k127_585860_8 - - - - 0.000001617 57.0
DYD1_k127_5867476_0 Histidine kinase - - - 0.000000000000000000000000000000000000000000008299 179.0
DYD1_k127_5875851_0 Putative diguanylate phosphodiesterase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000013 563.0
DYD1_k127_5875851_1 Peptidoglycan polymerase that is essential for cell wall elongation K05837 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001226 400.0
DYD1_k127_5875851_2 PFAM Aminotransferase, class IV K00824 - 2.6.1.21 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004759 315.0
DYD1_k127_5875851_3 Transglycosylase SLT domain K08305 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000002081 279.0
DYD1_k127_5875851_4 Biotin/lipoate A/B protein ligase family K03801 - 2.3.1.181 0.000000000000000000000000000000000000000000000000000000000000000000000003263 255.0
DYD1_k127_5875851_5 Lytic transglycosylase with a strong preference for naked glycan strands that lack stem peptides K03642 - - 0.00000000000000000000000000000000000000000000000000000000000000000000004743 250.0
DYD1_k127_5875851_6 DUF218 domain - - - 0.000000000000000000000000000000000000000000000002286 183.0
DYD1_k127_5875851_7 Catalyzes cross-linking of the peptidoglycan cell wall K05515 - 3.4.16.4 0.000000000000000000000000000000006364 130.0
DYD1_k127_5875851_8 response regulator K07814 - - 0.000000000000000000002322 102.0
DYD1_k127_5914735_0 Tripartite ATP-independent periplasmic transporter, DctM component - - - 1.541e-266 842.0
DYD1_k127_5914735_1 Catalyzes the attachment of tyrosine to tRNA(Tyr) in a two-step reaction tyrosine is first activated by ATP to form Tyr- AMP and then transferred to the acceptor end of tRNA(Tyr) K01866 - 6.1.1.1 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002346 529.0
DYD1_k127_5914735_10 Polymer-forming cytoskeletal - - - 0.0000000000000000000000000000001089 130.0
DYD1_k127_5914735_11 - - - - 0.000000000000000000000000005006 120.0
DYD1_k127_5914735_12 Voltage gated chloride channel K03281 - - 0.000000000000000001665 91.0
DYD1_k127_5914735_2 Catalyzes the NADPH-dependent reduction of N-acetyl-5- glutamyl phosphate to yield N-acetyl-L-glutamate 5-semialdehyde K00145 - 1.2.1.38 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004204 504.0
DYD1_k127_5914735_3 NMT1-like family K07080 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001075 448.0
DYD1_k127_5914735_4 Chloride channel K03281 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002801 424.0
DYD1_k127_5914735_5 Catalyzes the specific phosphorylation of 1,6-anhydro-N- acetylmuramic acid (anhMurNAc) with the simultaneous cleavage of the 1,6-anhydro ring, generating MurNAc-6-P. Is required for the utilization of anhMurNAc either imported from the medium or derived from its own cell wall murein, and thus plays a role in cell wall recycling K09001 - 2.7.1.170 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001272 377.0
DYD1_k127_5914735_6 Phosphoenolpyruvate phosphomutase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001633 310.0
DYD1_k127_5914735_7 Helix-turn-helix domain, rpiR family - - - 0.000000000000000000000000000000000000000000000000000000000000000000000002403 255.0
DYD1_k127_5914735_8 Required for insertion of 4Fe-4S clusters K15724 - - 0.00000000000000000000000000000000000000000000000000002488 189.0
DYD1_k127_5914735_9 COG0589 Universal stress protein UspA and related nucleotide-binding proteins - - - 0.0000000000000000000000000000000000000000006132 161.0
DYD1_k127_59352_0 NHL repeat - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004111 451.0
DYD1_k127_59352_1 helix_turn_helix, mercury resistance K19591 - - 0.000000000000000000000000000000000000002986 151.0
DYD1_k127_59352_2 ATPase, P-type, K Mg Cd Cu Zn Na Ca Na H-transporter K17686 - 3.6.3.54 0.0000000000000000000000000007204 118.0
DYD1_k127_59352_3 Protein involved in meta-pathway of phenol degradation - - - 0.00000000000005343 72.0
DYD1_k127_59352_4 E1-E2 ATPase K01533,K17686 - 3.6.3.4,3.6.3.54 0.00006212 48.0
DYD1_k127_5944142_0 Bacterial extracellular solute-binding proteins, family 5 Middle - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007021 629.0
DYD1_k127_5944142_1 Branched-chain amino acid transport system / permease component K01997 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003603 400.0
DYD1_k127_5954825_0 Ankyrin repeats (3 copies) K06867 - - 0.00000000000000000000000000000000000000000000000000000000000000000000001183 259.0
DYD1_k127_5954825_1 HupE / UreJ protein K03192 - - 0.000000000000000000000000000000001044 138.0
DYD1_k127_5954825_2 Nitrile hydratase beta subunit K20807 - 4.2.1.84 0.000000000000001781 79.0
DYD1_k127_5957019_0 TIGRFAM FeS assembly protein SufB K09014 - - 1.827e-274 848.0
DYD1_k127_5957019_1 In eubacteria ppGpp (guanosine 3'-diphosphate 5-' diphosphate) is a mediator of the stringent response that coordinates a variety of cellular activities in response to changes in nutritional abundance K00951 - 2.7.6.5 2.76e-233 744.0
DYD1_k127_5957019_10 TIGRFAM FeS assembly ATPase SufC K09013 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005769 387.0
DYD1_k127_5957019_11 ATP-grasp domain K01945 - 6.3.4.13 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006613 362.0
DYD1_k127_5957019_12 Redox regulated molecular chaperone. Protects both thermally unfolding and oxidatively damaged proteins from irreversible aggregation. Plays an important role in the bacterial defense system toward oxidative stress K04083 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009162 349.0
DYD1_k127_5957019_13 Synthesizes selenophosphate from selenide and ATP K01008 - 2.7.9.3 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004799 347.0
DYD1_k127_5957019_14 protein kinase activity - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003248 337.0
DYD1_k127_5957019_15 PFAM heat shock protein DnaJ - - - 0.000000000000000000000000000000000000000000000000000000000000000307 228.0
DYD1_k127_5957019_16 Transcriptional regulator K13643 - - 0.0000000000000000000000000000000000000000000000000000000001253 214.0
DYD1_k127_5957019_17 Belongs to the P(II) protein family K04752 - - 0.000000000000000000000000000000000000000000000000000001646 194.0
DYD1_k127_5957019_18 SUF system FeS assembly protein, NifU family K04488 - - 0.000000000000000000000000000000000000000000000000002068 188.0
DYD1_k127_5957019_19 membrane transporter protein K07090 - - 0.000000000000000000000000000000000000000000000000003272 191.0
DYD1_k127_5957019_2 peptidase S9A, prolyl oligopeptidase domain protein beta-propeller K01354 GO:0003674,GO:0003824,GO:0004175,GO:0004252,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006508,GO:0006807,GO:0008150,GO:0008152,GO:0008233,GO:0008236,GO:0016787,GO:0017171,GO:0019538,GO:0043170,GO:0044238,GO:0044424,GO:0044464,GO:0070011,GO:0070012,GO:0071704,GO:0140096,GO:1901564 3.4.21.83 5.867e-218 699.0
DYD1_k127_5957019_20 Belongs to the sigma-70 factor family. ECF subfamily K03088 - - 0.00000000000000000000000000000000000000000000002144 175.0
DYD1_k127_5957019_21 Rieske-like [2Fe-2S] domain K05710,K18087 - - 0.00000000000000000000000000000000000000000001206 170.0
DYD1_k127_5957019_22 mannose-ethanolamine phosphotransferase activity - - - 0.00000000000000000000000000000000000000003494 164.0
DYD1_k127_5957019_23 PaaD-like protein - - - 0.0000000000000000000000000000000000000009679 155.0
DYD1_k127_5957019_24 Belongs to the HSP15 family K04762 - - 0.00000000000000000000000000000000001034 141.0
DYD1_k127_5957019_25 Belongs to the HesB IscA family K15724 - - 0.00000000000000000000000000005574 121.0
DYD1_k127_5957019_26 Bacterial Fe(2+) trafficking - - - 0.00000000000000000000000000005617 120.0
DYD1_k127_5957019_27 oxidoreductase activity - - - 0.0000000000000000000981 89.0
DYD1_k127_5957019_28 Protein of unknown function (DUF3379) - - - 0.000000000004669 75.0
DYD1_k127_5957019_3 Catalyzes the removal of elemental sulfur and selenium atoms from L-cysteine, L-cystine, L-selenocysteine, and L- selenocystine to produce L-alanine K11717 - 2.8.1.7,4.4.1.16 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006752 581.0
DYD1_k127_5957019_4 PFAM Ammonium Transporter K03320 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003854 567.0
DYD1_k127_5957019_5 Diguanylate cyclase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003434 538.0
DYD1_k127_5957019_6 Diguanylate cyclase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001943 443.0
DYD1_k127_5957019_7 Uncharacterized protein family (UPF0051) K09015 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002121 431.0
DYD1_k127_5957019_8 Putative diguanylate phosphodiesterase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002744 435.0
DYD1_k127_5957019_9 UPF0761 membrane protein K07058 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006597 410.0
DYD1_k127_5957394_0 Belongs to the ABC transporter superfamily K13896 - - 2.831e-238 747.0
DYD1_k127_5957394_1 Isocitrate lyase K01637 GO:0003674,GO:0003824,GO:0004451,GO:0005488,GO:0005975,GO:0006081,GO:0006082,GO:0006097,GO:0008150,GO:0008152,GO:0009987,GO:0016829,GO:0016830,GO:0016833,GO:0019752,GO:0032787,GO:0043167,GO:0043169,GO:0043436,GO:0044237,GO:0044238,GO:0044262,GO:0044281,GO:0046487,GO:0071704 4.1.3.1 1.567e-209 658.0
DYD1_k127_5957394_10 TIGRFAM Polyhydroxyalkanoate synthesis repressor PhaR - - - 0.000000000000000000000000000000000000000000000000004459 186.0
DYD1_k127_5957394_11 transport system, permease component K13895 - - 0.0000000000000000000000000001448 116.0
DYD1_k127_5957394_12 Phasin protein - - - 0.00000342 54.0
DYD1_k127_5957394_2 Belongs to the thiolase family K00626 GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0044424,GO:0044464 2.3.1.9 1.144e-194 613.0
DYD1_k127_5957394_3 Poly(R)-hydroxyalkanoic acid synthase, class III, PhaC subunit K03821 GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0008150,GO:0008152,GO:0009058,GO:0016234,GO:0042618,GO:0042619,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0044424,GO:0044444,GO:0044464,GO:0070088,GO:0071704,GO:1901440,GO:1901441,GO:1901576 - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005392 542.0
DYD1_k127_5957394_4 LysR substrate binding domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003996 461.0
DYD1_k127_5957394_5 Inactivates the type B streptogramin antibiotics by linearizing the lactone ring at the ester linkage, generating a free phenylglycine carboxylate and converting the threonyl moiety into 2-amino-butenoic acid K18235 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001214 373.0
DYD1_k127_5957394_6 TIGRFAM acetoacetyl-CoA reductase K00023 - 1.1.1.36 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003464 363.0
DYD1_k127_5957394_7 TIGRFAM acetoacetyl-CoA reductase K00023 GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0044424,GO:0044464 1.1.1.36 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001856 332.0
DYD1_k127_5957394_8 TIGRFAM Poly(R)-hydroxyalkanoic acid synthase, class III, PhaE subunit - GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0008150,GO:0008152,GO:0009058,GO:0016234,GO:0042618,GO:0042619,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0044424,GO:0044444,GO:0044464,GO:0070088,GO:0071704,GO:1901440,GO:1901441,GO:1901576 - 0.00000000000000000000000000000000000000000000000000000000000000000000003722 256.0
DYD1_k127_5957394_9 Alpha/beta hydrolase family - - - 0.000000000000000000000000000000000000000000000000000000000000000004388 237.0
DYD1_k127_5963868_0 COG1028 Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) K00059 - 1.1.1.100 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005456 385.0
DYD1_k127_5963868_1 helix_turn _helix lactose operon repressor K02529 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002065 359.0
DYD1_k127_5963868_2 Protein of unknown function (DUF3179) - - - 0.00000000000000000000000000000000000000000000000000000000000000000000175 242.0
DYD1_k127_5963868_3 Protein of unknown function, DUF481 K07283 - - 0.0000000000000000000000000000000000000000000000001283 184.0
DYD1_k127_5963868_4 Protein of unknown function (DUF3179) - - - 0.0000001779 59.0
DYD1_k127_59652_0 In eubacteria ppGpp (guanosine 3'-diphosphate 5-' diphosphate) is a mediator of the stringent response that coordinates a variety of cellular activities in response to changes in nutritional abundance K01139 - 2.7.6.5,3.1.7.2 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001886 331.0
DYD1_k127_59652_1 Critical role in recombination and DNA repair. Helps process Holliday junction intermediates to mature products by catalyzing branch migration. Has a DNA unwinding activity characteristic of a DNA helicase with a 3'- to 5'- polarity. Unwinds branched duplex DNA (Y-DNA) K03655 - 3.6.4.12 0.000000000000000000000000000000000000000000000000000000000000000000000000000001167 271.0
DYD1_k127_59652_2 Endoribonuclease L-PSP K09022 - 3.5.99.10 0.00000000000000000000000000000000000000000000000000008182 191.0
DYD1_k127_5970791_0 Belongs to the class-II aminoacyl-tRNA synthetase family K04567 - 6.1.1.6 8.303e-219 689.0
DYD1_k127_5970791_1 Peptide chain release factor 2 directs the termination of translation in response to the peptide chain termination codons UGA and UAA K02836 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002348 468.0
DYD1_k127_5970791_2 GTPase that associates with the 50S ribosomal subunit and may have a role during protein synthesis or ribosome biogenesis K03665 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001684 439.0
DYD1_k127_5970791_3 Required for the first step of histidine biosynthesis. May allow the feedback regulation of ATP phosphoribosyltransferase activity by histidine K02502 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008437 429.0
DYD1_k127_5970791_4 HflC and HflK could encode or regulate a protease K04088 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000901 396.0
DYD1_k127_5970791_5 Catalyzes the transfer of a dimethylallyl group onto the adenine at position 37 in tRNAs that read codons beginning with uridine, leading to the formation of N6-(dimethylallyl)adenosine (i(6)A) K00791 GO:0003674,GO:0003824,GO:0006139,GO:0006396,GO:0006399,GO:0006400,GO:0006417,GO:0006725,GO:0006807,GO:0006950,GO:0008033,GO:0008150,GO:0008152,GO:0009266,GO:0009408,GO:0009451,GO:0009628,GO:0009889,GO:0009987,GO:0010467,GO:0010468,GO:0010556,GO:0010608,GO:0016070,GO:0016740,GO:0016765,GO:0019222,GO:0031323,GO:0031326,GO:0032268,GO:0033554,GO:0034248,GO:0034470,GO:0034605,GO:0034641,GO:0034660,GO:0043170,GO:0043412,GO:0043555,GO:0044237,GO:0044238,GO:0046483,GO:0050789,GO:0050794,GO:0050896,GO:0051171,GO:0051246,GO:0051716,GO:0052381,GO:0060255,GO:0065007,GO:0071704,GO:0080090,GO:0090304,GO:0140098,GO:0140101,GO:1901360,GO:1990497,GO:2000112,GO:2000765 2.5.1.75 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005602 355.0
DYD1_k127_5970791_6 HflC and HflK could regulate a protease K04087 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001364 316.0
DYD1_k127_5970791_7 RNA chaperone that binds small regulatory RNA (sRNAs) and mRNAs to facilitate mRNA translational regulation in response to envelope stress, environmental stress and changes in metabolite concentrations. Also binds with high specificity to tRNAs K03666 - - 0.00000000000000000000000000000001668 128.0
DYD1_k127_5970791_8 Uncharacterized protein conserved in bacteria (DUF2065) K09937 - - 0.0000000000000221 74.0
DYD1_k127_5974428_0 Belongs to the aspartokinase family K00928 - 2.7.2.4 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001325 594.0
DYD1_k127_5974428_1 Catalyzes the attachment of alanine to tRNA(Ala) in a two-step reaction alanine is first activated by ATP to form Ala- AMP and then transferred to the acceptor end of tRNA(Ala). Also edits incorrectly charged Ser-tRNA(Ala) and Gly-tRNA(Ala) via its editing domain K01872 - 6.1.1.7 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001166 365.0
DYD1_k127_5974428_2 DinB superfamily - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002235 357.0
DYD1_k127_5974428_3 Cyclophilin-like K09143 - - 0.00000000000000000000000000000000000000000615 157.0
DYD1_k127_5974428_4 Could accelerate the degradation of some genes transcripts potentially through selective RNA binding K03563 - - 0.00000000000000000000001202 102.0
DYD1_k127_5974428_5 PIN domain - - - 0.00000000000000000002852 96.0
DYD1_k127_5974428_6 Antitoxin Phd_YefM, type II toxin-antitoxin system - - - 0.00000000005845 66.0
DYD1_k127_5974428_8 Protein of unknown function (DUF2934) - - - 0.0000026 52.0
DYD1_k127_5991085_0 Bacterial extracellular solute-binding proteins, family 5 Middle K02035 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004334 536.0
DYD1_k127_5991085_1 Binding-protein-dependent transport system inner membrane component K02033 - - 0.00000000000000000000000000000000000000000000000000004498 192.0
DYD1_k127_5991085_2 AAA ATPase domain - - - 0.00007977 49.0
DYD1_k127_5995586_0 Involved in the TCA cycle. Catalyzes the stereospecific interconversion of fumarate to L-malate K01679 - 4.2.1.2 1.707e-195 621.0
DYD1_k127_5995586_1 Belongs to the pseudouridine synthase RsuA family K06178 - 5.4.99.22 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000001251 291.0
DYD1_k127_5995586_2 Methyladenine glycosylase K01246 - 3.2.2.20 0.0000000000000000000000000000000000000000000000000000000000000000000000000001739 261.0
DYD1_k127_5995586_3 PFAM HhH-GPD K07457 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000001859 259.0
DYD1_k127_5995586_4 Participates in chromosomal partition during cell division. May act via the formation of a condensin-like complex containing Smc and ScpA that pull DNA away from mid-cell into both cell halves K06024 - - 0.000000000000000000000000000000000000000000000000000000000374 208.0
DYD1_k127_5995586_5 Las17-binding protein actin regulator - - - 0.000000000000000000000000000000000000000000000000889 180.0
DYD1_k127_5995586_6 SET (Su(var)3-9, Enhancer-of-zeste, Trithorax) domain K07117 - - 0.000000000000000000001169 101.0
DYD1_k127_6011361_0 TrkA-N domain K10716 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001226 522.0
DYD1_k127_6011361_1 histone deacetylase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005949 421.0
DYD1_k127_6011361_2 Mechanosensitive ion channel K05802 - - 0.0000000000000000000000000000000000000005464 169.0
DYD1_k127_6016091_0 Outer membrane protein transport protein (OMPP1/FadL/TodX) - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002936 335.0
DYD1_k127_6051443_0 A type II topoisomerase that negatively supercoils closed circular double-stranded (ds) DNA in an ATP-dependent manner to modulate DNA topology and maintain chromosomes in an underwound state. Negative supercoiling favors strand separation, and DNA replication, transcription, recombination and repair, all of which involve strand separation. Also able to catalyze the interconversion of other topological isomers of dsDNA rings, including catenanes and knotted rings. Type II topoisomerases break and join 2 DNA strands simultaneously in an ATP-dependent manner K02469 - 5.99.1.3 0.0 1190.0
DYD1_k127_6051443_1 Catalyzes the reversible conversion of 3- phosphohydroxypyruvate to phosphoserine and of 3-hydroxy-2-oxo-4- phosphonooxybutanoate to phosphohydroxythreonine K00831 - 2.6.1.52 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000893 344.0
DYD1_k127_606347_0 Belongs to the peptidase M24B family K01262 - 3.4.11.9 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007959 599.0
DYD1_k127_606347_1 Ubiquinone biosynthesis hydroxylase, UbiH UbiF VisC COQ6 K03185 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002636 392.0
DYD1_k127_606347_2 TIGRFAM Ubiquinone biosynthesis hydroxylase, UbiH UbiF VisC COQ6 K18800 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001089 331.0
DYD1_k127_606347_3 Activator of cell division through the inhibition of FtsZ GTPase activity, therefore promoting FtsZ assembly into bundles of protofilaments necessary for the formation of the division Z ring. It is recruited early at mid-cell but it is not essential for cell division K09888 - - 0.00000000000000000000007083 101.0
DYD1_k127_606347_4 TIGRFAM TIGR02449 family protein K09892 - - 0.00000000005825 64.0
DYD1_k127_606347_5 Belongs to the 5-formyltetrahydrofolate cyclo-ligase family K01934 - 6.3.3.2 0.00004522 49.0
DYD1_k127_607908_0 Catalyzes the GTP-dependent ribosomal translocation step during translation elongation. During this step, the ribosome changes from the pre-translocational (PRE) to the post- translocational (POST) state as the newly formed A-site-bound peptidyl-tRNA and P-site-bound deacylated tRNA move to the P and E sites, respectively. Catalyzes the coordinated movement of the two tRNA molecules, the mRNA and conformational changes in the ribosome K02355 - - 0.0 1083.0
DYD1_k127_607908_1 DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates K03046 - 2.7.7.6 6.177e-211 665.0
DYD1_k127_607908_2 Interacts with and stabilizes bases of the 16S rRNA that are involved in tRNA selection in the A site and with the mRNA backbone. Located at the interface of the 30S and 50S subunits, it traverses the body of the 30S subunit contacting proteins on the other side and probably holding the rRNA structure together. The combined cluster of proteins S8, S12 and S17 appears to hold together the shoulder and platform of the 30S subunit K02950 GO:0003674,GO:0003735,GO:0005198,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0006412,GO:0006518,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0015935,GO:0019538,GO:0022626,GO:0022627,GO:0032991,GO:0034641,GO:0034645,GO:0043043,GO:0043170,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:0071704,GO:1901564,GO:1901566,GO:1901576,GO:1990904 - 0.00000000000000000000000000000000000000000000000000000000000000003314 225.0
DYD1_k127_607908_3 One of the primary rRNA binding proteins, it binds directly to 16S rRNA where it nucleates assembly of the head domain of the 30S subunit. Is located at the subunit interface close to the decoding center, probably blocks exit of the E-site tRNA K02992 - - 0.0000000000000000000000000000000000000000000000000000000000000041 222.0
DYD1_k127_607908_4 Elongation factor K02358 - - 0.000000000000000005023 83.0
DYD1_k127_6113534_0 Periplasmic binding protein domain K01999 - - 3.425e-212 669.0
DYD1_k127_6113534_1 PFAM AMP-dependent synthetase and ligase K00666,K01897,K02182 - 6.2.1.3,6.2.1.48 0.0000000000000000000000000000000000000000000000000000000000000000000000000000002225 269.0
DYD1_k127_611519_0 ABC transporter transmembrane region K02021 - - 5.408e-276 874.0
DYD1_k127_611519_1 Belongs to the class-V pyridoxal-phosphate-dependent aminotransferase family. PhnW subfamily K03430 - 2.6.1.37 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001659 529.0
DYD1_k127_611519_10 Aminotransferase class-V - GO:0001505,GO:0003674,GO:0003824,GO:0004760,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005777,GO:0006082,GO:0006520,GO:0006544,GO:0006545,GO:0006807,GO:0008150,GO:0008152,GO:0008453,GO:0008483,GO:0008652,GO:0009058,GO:0009069,GO:0009070,GO:0009987,GO:0016053,GO:0016740,GO:0016769,GO:0017144,GO:0019265,GO:0019752,GO:0042133,GO:0042136,GO:0042579,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0043436,GO:0044237,GO:0044238,GO:0044249,GO:0044281,GO:0044283,GO:0044424,GO:0044444,GO:0044464,GO:0046394,GO:0065007,GO:0065008,GO:0071704,GO:1901564,GO:1901566,GO:1901576,GO:1901605,GO:1901607 - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001136 316.0
DYD1_k127_611519_11 LysR substrate binding domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000001031 289.0
DYD1_k127_611519_12 LysR substrate binding domain K03566 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000004993 259.0
DYD1_k127_611519_13 Glucose dehydrogenase C-terminus - - - 0.00000000000000000000000000000000000000000000000000000000000000000000001945 267.0
DYD1_k127_611519_14 polysaccharide deacetylase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000005706 250.0
DYD1_k127_611519_15 Protein of unknown function DUF47 K07220 - - 0.000000000000000000000000000000000000000000000000000000000003063 215.0
DYD1_k127_611519_16 methyltransferase - - - 0.00000000000000000000000000000000000000000000000000002898 195.0
DYD1_k127_611519_17 Phosphoglycerate mutase family - - - 0.0000000000000000000000000000000000000000000000009129 184.0
DYD1_k127_611519_18 Protein conserved in bacteria - - - 0.0000000000000000000000000000000000000002179 157.0
DYD1_k127_611519_19 Cyclic nucleotide-monophosphate binding domain - - - 0.000000000000000000000000000000000001787 150.0
DYD1_k127_611519_2 Glycosyltransferase family 28 C-terminal domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007015 527.0
DYD1_k127_611519_20 - - - - 0.0000000000000000000006731 102.0
DYD1_k127_611519_3 Glycosyl transferases group 1 - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000422 508.0
DYD1_k127_611519_4 phosphate transporter K03306 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005573 512.0
DYD1_k127_611519_5 COG2114 Adenylate cyclase, family 3 (some proteins contain HAMP domain) K01768 - 4.6.1.1 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007982 436.0
DYD1_k127_611519_6 ABC-type Fe3 transport system, periplasmic component K02012 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008951 341.0
DYD1_k127_611519_7 Part of the ABC transporter complex PotABCD involved in spermidine putrescine import. Responsible for energy coupling to the transport system - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009717 341.0
DYD1_k127_611519_8 Glycosyl transferases group 1 - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001668 344.0
DYD1_k127_611519_9 Glycosyltransferase family 28 C-terminal domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002961 334.0
DYD1_k127_6131374_0 - - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004706 325.0
DYD1_k127_6131374_1 YHS domain K06966 - 3.2.2.10 0.000000000000000000000000000000006669 130.0
DYD1_k127_6131374_2 HflC and HflK could regulate a protease K04087 - - 0.0000000000000000000000000004236 114.0
DYD1_k127_6131374_3 Belongs to the monovalent cation proton antiporter 2 (CPA2) transporter (TC 2.A.37) family K11747 - - 0.000001185 54.0
DYD1_k127_6132923_0 D-galactarate dehydratase / Altronate hydrolase, C terminus - - - 6.193e-207 650.0
DYD1_k127_6132923_1 Bacterial protein of unknown function (DUF853) K06915 - - 2.352e-203 644.0
DYD1_k127_6132923_10 Succinate dehydrogenase/Fumarate reductase transmembrane subunit - - - 0.0000000000000000000001076 103.0
DYD1_k127_6132923_11 - - - - 0.00000000000000001933 91.0
DYD1_k127_6132923_12 LrgA family K06518 - - 0.000007733 55.0
DYD1_k127_6132923_2 ATP-dependent carboxylate-amine ligase which exhibits weak glutamate--cysteine ligase activity K06048 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000178 524.0
DYD1_k127_6132923_3 FAD linked oxidases, C-terminal domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005827 491.0
DYD1_k127_6132923_4 Belongs to the succinate dehydrogenase fumarate reductase iron-sulfur protein family K00245 - 1.3.5.4 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005198 346.0
DYD1_k127_6132923_5 Channel that opens in response to stretch forces in the membrane lipid bilayer. May participate in the regulation of osmotic pressure changes within the cell K03282 GO:0003674,GO:0005215,GO:0005216,GO:0005488,GO:0005515,GO:0005575,GO:0005623,GO:0005886,GO:0005887,GO:0006810,GO:0006811,GO:0006884,GO:0008150,GO:0008361,GO:0008381,GO:0009987,GO:0009992,GO:0015075,GO:0015267,GO:0015318,GO:0016020,GO:0016021,GO:0016043,GO:0019725,GO:0022803,GO:0022836,GO:0022838,GO:0022857,GO:0030104,GO:0031224,GO:0031226,GO:0032535,GO:0034220,GO:0042592,GO:0042802,GO:0044425,GO:0044459,GO:0044464,GO:0048878,GO:0051179,GO:0051234,GO:0055082,GO:0055085,GO:0065007,GO:0065008,GO:0071840,GO:0071944,GO:0090066 - 0.00000000000000000000000000000000000000000000000000000000001232 214.0
DYD1_k127_6132923_6 lactoylglutathione lyase activity - - - 0.000000000000000000000000000000000000001442 150.0
DYD1_k127_6132923_7 SAF domain K16845 - 4.4.1.24 0.000000000000000000000000000000000000001626 152.0
DYD1_k127_6132923_8 Succinate dehydrogenase/Fumarate reductase transmembrane subunit - - - 0.00000000000000000000000000000000007 142.0
DYD1_k127_6132923_9 The glycine cleavage system catalyzes the degradation of glycine K00605 - 2.1.2.10 0.000000000000000000000001899 112.0
DYD1_k127_6133461_0 Transcriptional regulator - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006925 422.0
DYD1_k127_6133461_1 two component, sigma54 specific, transcriptional regulator, Fis family K07714 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002088 389.0
DYD1_k127_6133461_10 Belongs to the universal stress protein A family - - - 0.0000000000000000000000000000000255 132.0
DYD1_k127_6133461_11 Hemerythrin HHE cation binding domain - - - 0.0000000000000000000000000000007038 135.0
DYD1_k127_6133461_12 serine-type endopeptidase activity K04772,K08372 - - 0.00000000000000000000000000003271 127.0
DYD1_k127_6133461_13 Protein of unknown function (DUF499) K06922 - - 0.000000000000000000000004276 104.0
DYD1_k127_6133461_14 Putative addiction module component - - - 0.000000000000001822 79.0
DYD1_k127_6133461_15 Uncharacterized protein conserved in bacteria (DUF2059) K09924 - - 0.00000000000003314 79.0
DYD1_k127_6133461_16 NfeD-like C-terminal, partner-binding K07403 - - 0.000002665 57.0
DYD1_k127_6133461_2 Formate/nitrite transporter K06212 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000001766 310.0
DYD1_k127_6133461_3 Phenazine biosynthesis-like protein K06998 - 5.3.3.17 0.00000000000000000000000000000000000000000000000000000000000000000002177 239.0
DYD1_k127_6133461_4 Protein of unknown function (DUF3365) - - - 0.000000000000000000000000000000000000000000000000008545 190.0
DYD1_k127_6133461_5 - - - - 0.000000000000000000000000000000000000000000000004529 181.0
DYD1_k127_6133461_6 Prokaryotic dksA/traR C4-type zinc finger - - - 0.000000000000000000000000000000000001878 141.0
DYD1_k127_6133461_7 Phenazine biosynthesis-like protein K06998 - 5.3.3.17 0.00000000000000000000000000000000000216 141.0
DYD1_k127_6133461_8 - - - - 0.000000000000000000000000000000000003548 140.0
DYD1_k127_6133461_9 Histidine kinase - - - 0.00000000000000000000000000000000002575 153.0
DYD1_k127_6134668_0 Catalyzes the transfer of a two-carbon ketol group from a ketose donor to an aldose acceptor, via a covalent intermediate with the cofactor thiamine pyrophosphate K00615 - 2.2.1.1 4.881e-198 625.0
DYD1_k127_6134668_1 Catalyzes the transfer of the alpha-amino group from S- adenosyl-L-methionine (SAM) to 7-keto-8-aminopelargonic acid (KAPA) to form 7,8-diaminopelargonic acid (DAPA). It is the only animotransferase known to utilize SAM as an amino donor K00833 - 2.6.1.62 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000667 614.0
DYD1_k127_6136499_0 signal transduction histidine kinase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003149 397.0
DYD1_k127_6136499_1 Specifically methylates the cytosine at position 967 (m5C967) of 16S rRNA K03500 - 2.1.1.176 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000399 375.0
DYD1_k127_6136499_2 Domain of unknown function (DUF4390) - - - 0.000000000000000002881 94.0
DYD1_k127_6147461_0 Gamma-glutamyltranspeptidase K00681 - 2.3.2.2,3.4.19.13 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005803 546.0
DYD1_k127_6147461_1 Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family K03296 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001019 373.0
DYD1_k127_6147461_2 Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006679 310.0
DYD1_k127_6147461_3 Specifically catalyzes the NAD or NADP-dependent dehydrogenation of L-aspartate to iminoaspartate K06989 - 1.4.1.21 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000001417 280.0
DYD1_k127_6147461_4 COG0560 Phosphoserine phosphatase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000001938 275.0
DYD1_k127_6147461_5 Accelerates the degradation of transcripts by removing pyrophosphate from the 5'-end of triphosphorylated RNA, leading to a more labile monophosphorylated state that can stimulate subsequent ribonuclease cleavage K08311 - - 0.00000000000000000000000000000000000000000000000000000000000001652 226.0
DYD1_k127_6164825_0 Protein of unknown function (DUF3179) - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006582 394.0
DYD1_k127_6164825_1 Protein of unknown function, DUF547 - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000612 295.0
DYD1_k127_6164825_2 Domain of unknown function DUF302 - - - 0.000000000000000000000000000000000000000000000000006874 183.0
DYD1_k127_6164825_3 UPF0060 membrane protein K09771 GO:0005575,GO:0005576 - 0.000000000000000000000000000000000000000000007667 169.0
DYD1_k127_6164825_4 Periplasmic binding protein - - - 0.0000000000000000000000000000000000000005926 154.0
DYD1_k127_6164825_5 Multicopper - - - 0.0000000000000000000000000000009113 122.0
DYD1_k127_6164825_6 Required to facilitate the formation of correct disulfide bonds in some periplasmic proteins and for the assembly of the periplasmic c-type cytochromes. Acts by transferring electrons from cytoplasmic thioredoxin to the periplasm. This transfer involves a cascade of disulfide bond formation and reduction steps K04084 - 1.8.1.8 0.00000000000000000000000000001525 122.0
DYD1_k127_6164825_7 Short C-terminal domain - - - 0.000000000000000000000001117 108.0
DYD1_k127_617510_0 Type I phosphodiesterase / nucleotide pyrophosphatase - - - 1.395e-200 635.0
DYD1_k127_617510_1 - - - - 0.00000000000000000000000000000000000000000000000000000000000008489 218.0
DYD1_k127_617510_2 Transmembrane family 220, helix - - - 0.00000000000000001592 89.0
DYD1_k127_617510_3 Cytochrome C oxidase, cbb3-type, subunit III - - - 0.000000983 56.0
DYD1_k127_6193436_0 transport system, fused permease components - - - 6.562e-244 771.0
DYD1_k127_6193436_1 III protein, CoA-transferase family - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007453 559.0
DYD1_k127_6193436_10 glyoxalase bleomycin resistance protein dioxygenase - - - 0.000005002 50.0
DYD1_k127_6193436_2 Amidase, hydantoinase carbamoylase family K06016 - 3.5.1.6,3.5.1.87 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003498 469.0
DYD1_k127_6193436_3 NMT1-like family K07080 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003373 378.0
DYD1_k127_6193436_4 Fic/DOC family - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003015 332.0
DYD1_k127_6193436_5 Fic/DOC family - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000003896 276.0
DYD1_k127_6193436_6 Aldolase/RraA K10218 - 4.1.3.17 0.000000000000000000000000000000000000000000000000000000000000002023 225.0
DYD1_k127_6193436_7 Belongs to the enoyl-CoA hydratase isomerase family K01692,K11264 - 4.1.1.41,4.2.1.17 0.000000000000000000000000000000000000000000000001918 177.0
DYD1_k127_6193436_8 Belongs to the GST superfamily K00799 - 2.5.1.18 0.000000000000000000000000000000000004691 146.0
DYD1_k127_6193436_9 FCD - - - 0.000000000000000000001774 105.0
DYD1_k127_6197275_0 PFAM glycoside hydrolase, family 77 K00705 - 2.4.1.25 0.0 1906.0
DYD1_k127_6197275_1 General (non sugar-specific) component of the phosphoenolpyruvate-dependent sugar phosphotransferase system (sugar PTS). This major carbohydrate active-transport system catalyzes the phosphorylation of incoming sugar substrates concomitantly with their translocation across the cell membrane. Enzyme I transfers the phosphoryl group from phosphoenolpyruvate (PEP) to the phosphoryl carrier protein (HPr) K01006 - 2.7.9.1 0.0 1298.0
DYD1_k127_6197275_2 Belongs to the glycosyl hydrolase 57 family K16149 - 2.4.1.18 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005871 617.0
DYD1_k127_6197275_3 Alcohol dehydrogenase GroES-like domain K13953 - 1.1.1.1 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007534 370.0
DYD1_k127_6197275_4 Diguanylate cyclase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000001469 277.0
DYD1_k127_6197275_5 diguanylate cyclase - - - 0.000000000000000000000000000000000000000000000000000000000006439 220.0
DYD1_k127_6197275_6 Carboxymuconolactone decarboxylase family - - - 0.0000000000001128 76.0
DYD1_k127_6197275_7 Domain of unknown function (DUF4912) K09942 - - 0.00001941 55.0
DYD1_k127_6206417_0 DNA polymerase X family K02347 - - 2.037e-252 792.0
DYD1_k127_6206417_1 Fic/DOC family - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001267 565.0
DYD1_k127_6206417_2 - - - - 0.000000000000000000000002946 106.0
DYD1_k127_6206417_4 dksA traR - - - 0.0000000000000266 73.0
DYD1_k127_6224273_0 Part of the tripartite ATP-independent periplasmic (TRAP) transport system - - - 1.588e-195 619.0
DYD1_k127_6224273_1 Tripartite ATP-independent periplasmic transporters, DctQ component - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000201 284.0
DYD1_k127_6224273_2 SnoaL-like domain - - - 0.000003056 49.0
DYD1_k127_622955_0 Critical role in recombination and DNA repair. Helps process Holliday junction intermediates to mature products by catalyzing branch migration. Has a DNA unwinding activity characteristic of a DNA helicase with a 3'- to 5'- polarity. Unwinds branched duplex DNA (Y-DNA) K03655 GO:0003674,GO:0003678,GO:0003724,GO:0003824,GO:0004003,GO:0004004,GO:0004386,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006139,GO:0006725,GO:0006807,GO:0006996,GO:0008026,GO:0008094,GO:0008150,GO:0008152,GO:0008186,GO:0009314,GO:0009379,GO:0009628,GO:0009987,GO:0010501,GO:0016043,GO:0016070,GO:0016462,GO:0016787,GO:0016817,GO:0016818,GO:0016887,GO:0017111,GO:0032392,GO:0032508,GO:0032991,GO:0033202,GO:0034641,GO:0042623,GO:0043170,GO:0044237,GO:0044238,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0048476,GO:0050896,GO:0051276,GO:0070035,GO:0071103,GO:0071704,GO:0071840,GO:0090304,GO:0140097,GO:0140098,GO:1901360,GO:1902494 3.6.4.12 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004483 565.0
DYD1_k127_622955_1 Belongs to the D-alanine--D-alanine ligase family K01921 - 6.3.2.4 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004806 462.0
DYD1_k127_622955_2 Sodium calcium exchanger K07301 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002856 381.0
DYD1_k127_622955_3 Belongs to the class-I pyridine nucleotide-disulfide oxidoreductase family K00383 - 1.8.1.7 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004869 372.0
DYD1_k127_622955_4 Catalyzes the prenylation of para-hydroxybenzoate (PHB) with an all-trans polyprenyl group. Mediates the second step in the final reaction sequence of ubiquinone-8 (UQ-8) biosynthesis, which is the condensation of the polyisoprenoid side chain with PHB, generating the first membrane-bound Q intermediate 3- octaprenyl-4-hydroxybenzoate K03179 - 2.5.1.39 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001396 351.0
DYD1_k127_622955_5 Involved in the biosynthesis of the chorismate, which leads to the biosynthesis of aromatic amino acids. Catalyzes the reversible NADPH linked reduction of 3-dehydroshikimate (DHSA) to yield shikimate (SA) K00014 GO:0000166,GO:0003674,GO:0003824,GO:0004764,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006082,GO:0008150,GO:0008152,GO:0009058,GO:0009423,GO:0009987,GO:0016053,GO:0016491,GO:0016614,GO:0016616,GO:0019632,GO:0019752,GO:0032787,GO:0036094,GO:0043436,GO:0043648,GO:0043650,GO:0044237,GO:0044249,GO:0044281,GO:0044283,GO:0044424,GO:0044444,GO:0044464,GO:0046394,GO:0046417,GO:0048037,GO:0050661,GO:0050662,GO:0055114,GO:0071704,GO:0097159,GO:1901265,GO:1901363,GO:1901576,GO:1901615 1.1.1.25 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000004188 298.0
DYD1_k127_622955_6 Glutamine cyclotransferase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000001634 274.0
DYD1_k127_622955_7 peptide-methionine (S)-S-oxide reductase activity K07304,K07305,K12267 - 1.8.4.11,1.8.4.12 0.0000000000000000000000000000000000000000000000000000000000000000002996 233.0
DYD1_k127_622955_8 COG0663 Carbonic anhydrases acetyltransferases, isoleucine patch superfamily - - - 0.00000000000000000000000000000000000000000000000000000000000001626 219.0
DYD1_k127_622955_9 Glutathione S-transferase, N-terminal domain K00799 - 2.5.1.18 0.000000000000000000000000000000000000000000000000000000017 204.0
DYD1_k127_6241146_0 Protoglobin K13590,K21019 - 2.7.7.65 0.0000000000000000000000000000000000000000000000000000000000000000000007787 252.0
DYD1_k127_6241146_1 PFAM NADPH-dependent FMN reductase K19784 - - 0.0000000000000000000000000000000000000000000000000000000000000000000301 236.0
DYD1_k127_6241146_2 Required for disulfide bond formation in some periplasmic proteins. Acts by oxidizing the DsbA protein K03611 - - 0.00000000000000000000000000000000000000000000000005126 184.0
DYD1_k127_6241146_3 PFAM GCN5-related N-acetyltransferase - - - 0.0000000000000000000000000000000000000000000004495 170.0
DYD1_k127_6241146_4 NTPase - - - 0.0000000000000000000000000000000000000007963 156.0
DYD1_k127_6241146_5 COG1246 N-acetylglutamate synthase and related acetyltransferases K00619 - 2.3.1.1 0.000000000000000000000000001519 118.0
DYD1_k127_6241146_6 Cyclic nucleotide-monophosphate binding domain - - - 0.000000000000002204 86.0
DYD1_k127_6241146_7 - - - - 0.000715 50.0
DYD1_k127_6252592_0 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase K08319 - 1.1.1.411 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004358 360.0
DYD1_k127_6252592_1 Alanine acetyltransferase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000005838 263.0
DYD1_k127_6252592_2 DoxX K15977 - - 0.00000000000000000000000000000000000002712 146.0
DYD1_k127_6252592_3 MAPEG family - - - 0.00000000000000000000000000000233 124.0
DYD1_k127_6252592_4 Domain of unknown function (DUF1330) - - - 0.0000000000000000000005317 97.0
DYD1_k127_6252592_5 Polyketide cyclase / dehydrase and lipid transport - - - 0.000006774 55.0
DYD1_k127_6261664_0 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain K00520 - 1.16.1.1 1.317e-195 622.0
DYD1_k127_6261664_1 PFAM Fatty acid hydroxylase - - - 0.00000000000000000000000000000000000000000000000000000002418 198.0
DYD1_k127_6289760_0 modulator of DNA gyrase K03568 - - 2.108e-215 679.0
DYD1_k127_6289760_1 Protein of unknown function - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003706 414.0
DYD1_k127_6289760_2 Nitrilase cyanide hydratase and apolipoprotein N-acyltransferase K11206 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007998 323.0
DYD1_k127_6289760_3 TIGRFAM ribonuclease, Rne Rng family K08301 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000141 289.0
DYD1_k127_6289760_4 Putative modulator of DNA gyrase K03592 - - 0.00000000000000000000001592 103.0
DYD1_k127_6353876_0 PFAM glycosyl transferase family 35 K00688 - 2.4.1.1 0.0 1074.0
DYD1_k127_6353876_1 Catalyzes the synthesis of ADP-glucose, a sugar donor used in elongation reactions on alpha-glucans K00975 - 2.7.7.27 5.365e-211 667.0
DYD1_k127_6353876_10 Pfam Methyltransferase - - - 0.00000000000000000000000000000000000000000000000000000000000000006379 229.0
DYD1_k127_6353876_11 Thioesterase superfamily protein K10806 - - 0.0000000000000000000000000000000000000000000009739 168.0
DYD1_k127_6353876_12 Alcohol dehydrogenase GroES-like domain K00008 - 1.1.1.14 0.0000000000000000000000000000000000000000002273 166.0
DYD1_k127_6353876_13 Protein of unknown function, DUF484 K09921 - - 0.0000000000000000000000000000000000006045 152.0
DYD1_k127_6353876_14 argininosuccinate lyase K01755 - 4.3.2.1 0.000000000000000000000000000001036 123.0
DYD1_k127_6353876_15 Saccharopine dehydrogenase - - - 0.000000000000000000000000003342 128.0
DYD1_k127_6353876_16 CAAX protease self-immunity K01266,K07052 - 3.4.11.19 0.000000000000000000000000003736 123.0
DYD1_k127_6353876_17 PFAM Uncharacterised protein family (UPF0153) K06940 - - 0.00000000000000000000000005325 111.0
DYD1_k127_6353876_18 triphosphatase activity K18446 - 3.6.1.25 0.00000000000000008606 91.0
DYD1_k127_6353876_19 - - - - 0.0003551 50.0
DYD1_k127_6353876_2 Synthesizes alpha-1,4-glucan chains using ADP-glucose K00703 - 2.4.1.21 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003699 539.0
DYD1_k127_6353876_3 Specifically catalyzes the decarboxylation of meso- diaminopimelate (meso-DAP) to L-lysine K01586 - 4.1.1.20 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000171 533.0
DYD1_k127_6353876_4 Mycolic acid cyclopropane synthetase K00574 - 2.1.1.79 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001067 526.0
DYD1_k127_6353876_5 Catalyzes the hydrolysis of UDP-3-O-myristoyl-N- acetylglucosamine to form UDP-3-O-myristoylglucosamine and acetate, the committed step in lipid A biosynthesis K02535 - 3.5.1.108 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004948 465.0
DYD1_k127_6353876_6 Catalyzes the stereoinversion of LL-2,6- diaminoheptanedioate (L,L-DAP) to meso-diaminoheptanedioate (meso- DAP), a precursor of L-lysine and an essential component of the bacterial peptidoglycan K01778 GO:0003674,GO:0003824,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006082,GO:0006520,GO:0006553,GO:0006807,GO:0008150,GO:0008152,GO:0008652,GO:0008837,GO:0009058,GO:0009066,GO:0009067,GO:0009085,GO:0009089,GO:0009987,GO:0016053,GO:0016853,GO:0016854,GO:0016855,GO:0019752,GO:0036361,GO:0043436,GO:0043648,GO:0044237,GO:0044238,GO:0044249,GO:0044281,GO:0044283,GO:0044424,GO:0044444,GO:0044464,GO:0046394,GO:0046451,GO:0047661,GO:0071704,GO:1901564,GO:1901566,GO:1901576,GO:1901605,GO:1901607 5.1.1.7 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001301 347.0
DYD1_k127_6353876_7 Belongs to the 'phage' integrase family. XerC subfamily K03733 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002536 324.0
DYD1_k127_6353876_8 Psort location Cytoplasmic, score K00008,K00060 - 1.1.1.103,1.1.1.14 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000001774 294.0
DYD1_k127_6353876_9 PFAM regulatory protein TetR - - - 0.000000000000000000000000000000000000000000000000000000000000000000000001204 251.0
DYD1_k127_63640_0 Catalyzes the reduction of ribonucleotides to deoxyribonucleotides. May function to provide a pool of deoxyribonucleotide precursors for DNA repair during oxygen limitation and or for immediate growth after restoration of oxygen K00525 - 1.17.4.1 0.0 1319.0
DYD1_k127_63640_1 pfkB family carbohydrate kinase K00856 - 2.7.1.20 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002377 471.0
DYD1_k127_63640_2 COG0209 Ribonucleotide reductase, alpha subunit - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001896 317.0
DYD1_k127_6419214_0 Aconitase C-terminal domain K01681 - 4.2.1.3 0.0 1283.0
DYD1_k127_6419214_1 Component of the pyruvate dehydrogenase (PDH) complex, that catalyzes the overall conversion of pyruvate to acetyl-CoA and CO(2) K00163 - 1.2.4.1 4.683e-318 981.0
DYD1_k127_6419214_2 malic enzyme K00029 - 1.1.1.40 1.909e-301 946.0
DYD1_k127_6419214_3 Belongs to the MtfA family K09933 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000009341 275.0
DYD1_k127_6419214_4 FKBP-type peptidyl-prolyl isomerase K03773 - 5.2.1.8 0.00000000000000000000000000000000000000000000000000000000000000000001182 241.0
DYD1_k127_6419214_5 Belongs to the P(II) protein family K04752 - - 0.000000000000000000000000000000000000000000000000009813 183.0
DYD1_k127_6419214_6 Ammonium transporter K03320 - - 0.000000000001558 68.0
DYD1_k127_642090_0 PFAM NADH Ubiquinone plastoquinone (complex I) K12137 - - 8.22e-245 774.0
DYD1_k127_642090_1 PFAM NADH Ubiquinone plastoquinone (complex I) K12141 - - 8.605e-229 717.0
DYD1_k127_642090_10 Part of the ABC transporter complex PotABCD involved in spermidine putrescine import. Responsible for energy coupling to the transport system K02052 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000887 470.0
DYD1_k127_642090_11 PFAM extracellular solute-binding protein family 1 K02055 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003062 461.0
DYD1_k127_642090_12 FAD dependent oxidoreductase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001565 429.0
DYD1_k127_642090_13 NADH dehydrogenase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002388 406.0
DYD1_k127_642090_14 PFAM LysR - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001092 389.0
DYD1_k127_642090_15 Enoyl-CoA hydratase/isomerase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002451 360.0
DYD1_k127_642090_16 Succinyl-CoA synthetase functions in the citric acid cycle (TCA), coupling the hydrolysis of succinyl-CoA to the synthesis of either ATP or GTP and thus represents the only step of substrate-level phosphorylation in the TCA. The alpha subunit of the enzyme binds the substrates coenzyme A and phosphate, while succinate binding and nucleotide specificity is provided by the beta subunit - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002575 316.0
DYD1_k127_642090_17 Succinyl-CoA synthetase functions in the citric acid cycle (TCA), coupling the hydrolysis of succinyl-CoA to the synthesis of either ATP or GTP and thus represents the only step of substrate-level phosphorylation in the TCA. The beta subunit provides nucleotide specificity of the enzyme and binds the substrate succinate, while the binding sites for coenzyme A and phosphate are found in the alpha subunit - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000001792 265.0
DYD1_k127_642090_18 hydrogenase 4 membrane K12140 GO:0005575,GO:0005623,GO:0005886,GO:0016020,GO:0044464,GO:0071944 - 0.00000000000000000000000000000000000000000000000000000000000000000000000002471 257.0
DYD1_k127_642090_19 NADH ubiquinone oxidoreductase, 20 Kd subunit - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000002009 253.0
DYD1_k127_642090_2 Binding-protein-dependent transport system inner membrane component K02053,K02054 - - 2.471e-227 721.0
DYD1_k127_642090_20 methylglyoxal synthase activity K01734 GO:0003674,GO:0003824,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006081,GO:0008150,GO:0008152,GO:0008929,GO:0009058,GO:0009438,GO:0009987,GO:0016829,GO:0016835,GO:0016838,GO:0019242,GO:0042180,GO:0042181,GO:0044237,GO:0044249,GO:0044281,GO:0044283,GO:0044424,GO:0044444,GO:0044464,GO:0046184,GO:0071704,GO:1901576 4.2.3.3 0.00000000000000000000000000000000000000000000000000000000000007351 222.0
DYD1_k127_642090_21 permeases of the drug metabolite transporter (DMT) superfamily - - - 0.0000000000000000000000000000000000000000000000000003174 197.0
DYD1_k127_642090_22 UbiA prenyltransferase family K03179 - 2.5.1.39 0.00000000000000000000000000000000000000003954 166.0
DYD1_k127_642090_23 methyltransferase activity - - - 0.000369 46.0
DYD1_k127_642090_3 Respiratory-chain NADH dehydrogenase, 49 Kd subunit - - - 1.475e-195 625.0
DYD1_k127_642090_4 MmgE/PrpD family - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001605 569.0
DYD1_k127_642090_5 fad dependent oxidoreductase K09471 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003395 531.0
DYD1_k127_642090_6 Catalyzes the conversion of 3-deoxy-D-arabino- heptulosonate 7-phosphate (DAHP) to dehydroquinate (DHQ) K01735,K19969 - 4.2.3.152,4.2.3.4 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008556 516.0
DYD1_k127_642090_7 TatD related DNase K07051 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005023 490.0
DYD1_k127_642090_8 ATP ADP translocase K03301 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007909 488.0
DYD1_k127_642090_9 Xylose isomerase domain protein TIM barrel - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004691 477.0
DYD1_k127_6421763_0 Male sterility protein K01784 - 5.1.3.2 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001184 398.0
DYD1_k127_6421763_1 ThiF family - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002974 342.0
DYD1_k127_6421763_2 Catalyzes the oxidation of either pyridoxine 5'- phosphate (PNP) or pyridoxamine 5'-phosphate (PMP) into pyridoxal 5'-phosphate (PLP) K00275 - 1.4.3.5 0.00000000000000000000000000000000000000000000000000000000000000000000000000001014 265.0
DYD1_k127_6421763_3 PFAM SNARE associated Golgi protein - - - 0.00000000000000000000000000000000000000000000000000000000000000000000002641 249.0
DYD1_k127_6421763_4 proteolysis - - - 0.000000000000000000000000000000000000000000009231 166.0
DYD1_k127_6421763_5 TIGRFAM ATP-dependent helicase HrpA K03578 - 3.6.4.13 0.000000000000000000000000000004016 123.0
DYD1_k127_6445207_0 TIGRFAM formate dehydrogenase, alpha subunit K00123 - 1.17.1.9 0.0 1467.0
DYD1_k127_6445207_1 Dehydrogenase K00122 - 1.17.1.9 2.318e-198 622.0
DYD1_k127_6445207_2 NADH-ubiquinone oxidoreductase-F iron-sulfur binding region K00122 - 1.17.1.9 0.00000000000000000000000000000000000000000000000000000000000000000001509 238.0
DYD1_k127_6445207_3 Sulfurtransferase K01011 - 2.8.1.1,2.8.1.2 0.0000000000000000000000000000000000000001701 154.0
DYD1_k127_6455094_0 - - - - 0.0000000000000000000000000000000000000003478 155.0
DYD1_k127_6455094_1 plasmid maintenance K03496 - - 0.000000000000000000000000000011 128.0
DYD1_k127_6455094_2 Sel1-like repeats. - - - 0.0005476 51.0
DYD1_k127_6471949_0 Phosphotransferase enzyme family K00899 - 2.7.1.100 0.0000000000000000000000000000000000000000000000000000000000000000000000000000001842 272.0
DYD1_k127_6471949_1 Transcriptional regulator K01420 - - 0.000000000000000000000000000000000000000000000000000000000000000009818 232.0
DYD1_k127_6471949_2 Forms passive diffusion pores that allow small molecular weight hydrophilic materials across the outer membrane - - - 0.0000001062 57.0
DYD1_k127_647362_0 ABC transporter transmembrane K11085 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006232 553.0
DYD1_k127_647362_1 Glucose-methanol-choline (GMC) oxidoreductase NAD binding site - - - 0.00000000000000000000000000000000000000002601 156.0
DYD1_k127_6474278_0 Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain K03520 - 1.2.5.3 7.821e-259 816.0
DYD1_k127_6474278_1 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004875 582.0
DYD1_k127_6474278_2 Protein of unknown function (DUF2750) - - - 0.00000000000000000000000003022 113.0
DYD1_k127_6474278_3 Ribonuclease toxin, BrnT, of type II toxin-antitoxin system - - - 0.0000000000001232 74.0
DYD1_k127_6483034_0 Sigma-70, region 4 K03088 - - 5.162e-195 617.0
DYD1_k127_6483034_1 YCII-related domain - - - 0.0001562 45.0
DYD1_k127_6497521_0 LysR substrate binding domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001052 410.0
DYD1_k127_6497521_1 Methyl-transferase K06983 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001059 395.0
DYD1_k127_6497521_2 Cupin 2, conserved barrel domain protein - - - 0.00000000000000000000000000000000000000000000002367 175.0
DYD1_k127_6497521_3 Gamma-glutamyl cyclotransferase, AIG2-like - - - 0.000000000000000000000000000000000007174 140.0
DYD1_k127_6497521_4 Protein of unknown function (DUF3237) - - - 0.00000000000000000000000000725 128.0
DYD1_k127_6497521_5 peptidyl-tyrosine sulfation - - - 0.000000000000000000009628 104.0
DYD1_k127_6497521_6 FAD linked oxidase domain protein - - - 0.0000000002902 61.0
DYD1_k127_6523073_0 PFAM PrkA AAA K07180 - - 0.0 1065.0
DYD1_k127_6523073_1 elongation factor G K02355 - - 1.208e-295 923.0
DYD1_k127_6523073_10 - - - - 0.0000000000004947 76.0
DYD1_k127_6523073_2 SpoVR family K06415 - - 3.954e-234 734.0
DYD1_k127_6523073_3 Belongs to the UPF0229 family K09786 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001442 590.0
DYD1_k127_6523073_4 Transmembrane secretion effector - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001106 458.0
DYD1_k127_6523073_5 Serine dehydrogenase proteinase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004472 424.0
DYD1_k127_6523073_6 Specifically methylates the guanosine in position 1516 of 16S rRNA K15984 - 2.1.1.242 0.000000000000000000000000000000000000000868 159.0
DYD1_k127_6523073_7 Peptidoglycan-binding domain 1 protein K02450 GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005886,GO:0016020,GO:0044424,GO:0044464,GO:0071944 - 0.000000000000000000000000000002939 122.0
DYD1_k127_6523073_8 Specifically methylates the N3 position of the uracil ring of uridine 1498 (m3U1498) in 16S rRNA. Acts on the fully assembled 30S ribosomal subunit K09761 GO:0000154,GO:0001510,GO:0003674,GO:0003824,GO:0006139,GO:0006364,GO:0006396,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0008168,GO:0008170,GO:0008173,GO:0008649,GO:0008757,GO:0009451,GO:0009987,GO:0010467,GO:0016070,GO:0016072,GO:0016436,GO:0016740,GO:0016741,GO:0022613,GO:0031167,GO:0032259,GO:0034470,GO:0034641,GO:0034660,GO:0042254,GO:0043170,GO:0043412,GO:0043414,GO:0044085,GO:0044237,GO:0044238,GO:0044260,GO:0046483,GO:0070042,GO:0070475,GO:0071704,GO:0071840,GO:0090304,GO:0140098,GO:0140102,GO:1901360 2.1.1.193 0.000000000000000000000000000315 124.0
DYD1_k127_6523073_9 Domain of unknown function (DUF4156) - - - 0.000000000000001944 87.0
DYD1_k127_652447_0 Belongs to the aldehyde dehydrogenase family - - - 3.23e-228 718.0
DYD1_k127_652447_1 Receptor family ligand binding region K01999 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001642 545.0
DYD1_k127_652447_2 Branched-chain amino acid transport system / permease component K01997 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000848 403.0
DYD1_k127_652447_3 amine dehydrogenase activity - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001731 319.0
DYD1_k127_652447_4 glutathione S-transferase K00799 - 2.5.1.18 0.0000000000000000000000000000000000000000000000000000000000511 214.0
DYD1_k127_652447_5 Adenylyl- / guanylyl cyclase, catalytic domain - - - 0.000000000000000000000000000000000000000000000000000000104 213.0
DYD1_k127_652447_6 membrane transporter protein K07090 - - 0.000000000000000000000000001837 123.0
DYD1_k127_652447_7 Belongs to the binding-protein-dependent transport system permease family K01998 - - 0.000000000000000000000000003123 121.0
DYD1_k127_6527963_0 Chromate transporter K07240 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008032 496.0
DYD1_k127_6527963_1 EamA-like transporter family - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000002862 273.0
DYD1_k127_6527963_2 Transcriptional regulator - - - 0.000000000000000000000000000000000001285 143.0
DYD1_k127_6527963_3 Methyl-transferase K18912 - 1.14.99.50 0.00000000000000000001609 98.0
DYD1_k127_6527963_4 PD-(D/E)XK nuclease superfamily K16898 - 3.6.4.12 0.000000000000003943 83.0
DYD1_k127_652882_0 Catalyzes two activities which are involved in the cyclic version of arginine biosynthesis the synthesis of N- acetylglutamate from glutamate and acetyl-CoA as the acetyl donor, and of ornithine by transacetylation between N(2)-acetylornithine and glutamate K00620 - 2.3.1.1,2.3.1.35 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001204 469.0
DYD1_k127_652882_1 Part of the Sec protein translocase complex. Interacts with the SecYEG preprotein conducting channel. Has a central role in coupling the hydrolysis of ATP to the transfer of proteins into and across the cell membrane, serving both as a receptor for the preprotein-SecB complex and as an ATP-driven molecular motor driving the stepwise translocation of polypeptide chains across the membrane K03070 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004841 342.0
DYD1_k127_652882_2 Belongs to the Nudix hydrolase family K03574 - 3.6.1.55 0.0000005975 53.0
DYD1_k127_6529510_0 thus facilitating recognition of the initiation point. It is needed to translate mRNA with a short Shine-Dalgarno (SD) purine-rich sequence K02945 - - 3.929e-267 833.0
DYD1_k127_6529510_1 Modulates cellular lipopolysaccharide (LPS) levels by regulating LpxC, which is involved in lipid A biosynthesis. May act by modulating the proteolytic activity of FtsH towards LpxC. May also coordinate assembly of proteins involved in LPS synthesis at the plasma membrane K19804 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001557 370.0
DYD1_k127_6529510_2 Catalyzes the decarboxylation of orotidine 5'- monophosphate (OMP) to uridine 5'-monophosphate (UMP) K01591 - 4.1.1.23 0.00000000000000000000000000000000000000000000000000000000000000000000000000001167 266.0
DYD1_k127_6529510_3 This protein is one of the two subunits of integration host factor, a specific DNA-binding protein that functions in genetic recombination as well as in transcriptional and translational control K05788 - - 0.0000000000000000000000000000000000000002837 152.0
DYD1_k127_6529510_4 Bifunctional protein RfaE, domain I K21344 - 2.7.1.167 0.000000000000000000000000000000000000001374 152.0
DYD1_k127_6529510_5 Bacterial extracellular solute-binding proteins, family 5 Middle K02035 - - 0.000000000000000000000007303 105.0
DYD1_k127_6529510_6 Lipopolysaccharide assembly protein A domain K08992 - - 0.000000001371 63.0
DYD1_k127_6529510_7 Belongs to the cytidylate kinase family. Type 1 subfamily K00945 GO:0003674,GO:0003824,GO:0004127,GO:0004592,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006082,GO:0006139,GO:0006520,GO:0006573,GO:0006575,GO:0006725,GO:0006732,GO:0006753,GO:0006766,GO:0006767,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009081,GO:0009108,GO:0009110,GO:0009117,GO:0009123,GO:0009165,GO:0009987,GO:0015939,GO:0015940,GO:0016053,GO:0016301,GO:0016310,GO:0016740,GO:0016772,GO:0016776,GO:0016874,GO:0016879,GO:0016881,GO:0018130,GO:0019205,GO:0019438,GO:0019637,GO:0019752,GO:0032787,GO:0033317,GO:0034641,GO:0034654,GO:0040007,GO:0042364,GO:0042398,GO:0043436,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0044283,GO:0044424,GO:0044444,GO:0044464,GO:0046394,GO:0046483,GO:0046939,GO:0046940,GO:0050145,GO:0051186,GO:0051188,GO:0055086,GO:0071704,GO:0072330,GO:0090407,GO:1901293,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576,GO:1901605 2.7.4.25 0.000000005419 57.0
DYD1_k127_6546224_0 damaged site, the DNA wraps around one UvrB monomer. DNA wrap is dependent on ATP binding by UvrB and probably causes local melting of the DNA helix, facilitating insertion of UvrB beta-hairpin between the DNA strands. Then UvrB probes one DNA strand for the presence of a lesion. If a lesion is found the UvrA subunits dissociate and the UvrB-DNA preincision complex is formed. This complex is subsequently bound by UvrC and the second UvrB is released. If no lesion is found, the DNA wraps around the other UvrB subunit that will check the other stand for damage K03702 - - 7.157e-308 956.0
DYD1_k127_6546224_1 Catalyzes the attachment of threonine to tRNA(Thr) in a two-step reaction L-threonine is first activated by ATP to form Thr-AMP and then transferred to the acceptor end of tRNA(Thr) K01868 - 6.1.1.3 9.65e-307 950.0
DYD1_k127_6546224_10 HNH nucleases - - - 0.000000000000000001844 89.0
DYD1_k127_6546224_11 Belongs to the bacterial ribosomal protein bL35 family K02916 GO:0003674,GO:0003735,GO:0005198,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0015934,GO:0022625,GO:0022626,GO:0032991,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:1990904 - 0.000000000000000007832 84.0
DYD1_k127_6546224_2 Belongs to the phenylalanyl-tRNA synthetase beta subunit family. Type 1 subfamily K01890 - 6.1.1.20 1.473e-251 798.0
DYD1_k127_6546224_3 Belongs to the class-II aminoacyl-tRNA synthetase family. Phe-tRNA synthetase alpha subunit type 1 subfamily K01889 GO:0003674,GO:0003824,GO:0004812,GO:0004826,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006082,GO:0006139,GO:0006399,GO:0006412,GO:0006418,GO:0006432,GO:0006518,GO:0006520,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009328,GO:0009987,GO:0010467,GO:0016070,GO:0016874,GO:0016875,GO:0019538,GO:0019752,GO:0032991,GO:0034641,GO:0034645,GO:0034660,GO:0043038,GO:0043039,GO:0043043,GO:0043170,GO:0043436,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044281,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0071704,GO:0090304,GO:0140098,GO:0140101,GO:1901360,GO:1901564,GO:1901566,GO:1901576,GO:1902494 6.1.1.20 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007972 492.0
DYD1_k127_6546224_4 serine threonine protein kinase K08282 - 2.7.11.1 0.00000000000000000000000000000000000000000000000000000000000000000000000000004226 284.0
DYD1_k127_6546224_5 IF-3 binds to the 30S ribosomal subunit and shifts the equilibrum between 70S ribosomes and their 50S and 30S subunits in favor of the free subunits, thus enhancing the availability of 30S subunits on which protein synthesis initiation begins K02520 - - 0.0000000000000000000000000000000000000000000000000000000000000000000961 237.0
DYD1_k127_6546224_6 Binds directly to 23S ribosomal RNA and is necessary for the in vitro assembly process of the 50S ribosomal subunit. It is not involved in the protein synthesizing functions of that subunit K02887 GO:0000027,GO:0003674,GO:0003735,GO:0005198,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0006996,GO:0008150,GO:0009987,GO:0015934,GO:0016043,GO:0022607,GO:0022613,GO:0022618,GO:0022625,GO:0022626,GO:0032991,GO:0034622,GO:0042254,GO:0042255,GO:0042273,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043933,GO:0044085,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:0065003,GO:0070925,GO:0071826,GO:0071840,GO:1990904 - 0.0000000000000000000000000000000000000000000000000006146 185.0
DYD1_k127_6546224_7 This protein is one of the two subunits of integration host factor, a specific DNA-binding protein that functions in genetic recombination as well as in transcriptional and translational control K04764 - - 0.000000000000000000000000000000000000002258 149.0
DYD1_k127_6546224_8 Prokaryotic N-terminal methylation motif K02456 - - 0.000000000000000000000000000000001381 134.0
DYD1_k127_6546224_9 Type II transport protein GspH K08084 - - 0.000000000000000000000000008709 118.0
DYD1_k127_6575103_0 PFAM Amylo-alpha-16-glucosidase K00705 - 2.4.1.25 1.117e-301 941.0
DYD1_k127_6575103_1 Glycoside hydrolase 15-related - - - 6.964e-253 807.0
DYD1_k127_6575103_10 GMC oxidoreductase - - - 0.0000000000000000000000000000000000000000000000000000000003871 220.0
DYD1_k127_6575103_11 Putative DNA-binding domain - - - 0.0000000000000000000000000000000000000000000000000000001102 211.0
DYD1_k127_6575103_12 DoxX K15977 - - 0.0000000000000000000000000000000000003576 149.0
DYD1_k127_6575103_2 oxidoreductase activity, acting on CH-OH group of donors K00034 - 1.1.1.47 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006206 385.0
DYD1_k127_6575103_3 Protein of unknown function (DUF692) K09930 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005335 362.0
DYD1_k127_6575103_4 Mechanosensitive ion channel K22044 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004316 379.0
DYD1_k127_6575103_5 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000006442 312.0
DYD1_k127_6575103_6 Putative cyclase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000003741 280.0
DYD1_k127_6575103_7 Lecithin:cholesterol acyltransferase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000145 277.0
DYD1_k127_6575103_8 helix_turn_helix, Lux Regulon - - - 0.000000000000000000000000000000000000000000000000000000000000002073 226.0
DYD1_k127_6575103_9 Glucosamine-6-phosphate isomerases/6-phosphogluconolactonase K01057 - 3.1.1.31 0.00000000000000000000000000000000000000000000000000000000001108 216.0
DYD1_k127_6578054_0 The beta subunit is responsible for the synthesis of L- tryptophan from indole and L-serine K01696 GO:0000162,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006082,GO:0006520,GO:0006568,GO:0006576,GO:0006586,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0008652,GO:0009058,GO:0009072,GO:0009073,GO:0009308,GO:0009309,GO:0009987,GO:0016053,GO:0018130,GO:0019438,GO:0019752,GO:0034641,GO:0042401,GO:0042430,GO:0042435,GO:0043436,GO:0044106,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0044283,GO:0044424,GO:0044464,GO:0046219,GO:0046394,GO:0046483,GO:0071704,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576,GO:1901605,GO:1901607 4.2.1.20 7.318e-205 648.0
DYD1_k127_6578054_1 Topoisomerase IV is essential for chromosome segregation. It relaxes supercoiled DNA. Performs the decatenation events required during the replication of a circular DNA molecule K02621 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001929 407.0
DYD1_k127_6578054_2 The alpha subunit is responsible for the aldol cleavage of indoleglycerol phosphate to indole and glyceraldehyde 3- phosphate K01695 - 4.2.1.20 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002723 341.0
DYD1_k127_6578054_3 Formation of pseudouridine at positions 38, 39 and 40 in the anticodon stem and loop of transfer RNAs K06173 - 5.4.99.12 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000326 315.0
DYD1_k127_6578054_4 Belongs to the TrpF family K01817 - 5.3.1.24 0.000000000000000000000000000000000000000000000000000000000000000000001701 241.0
DYD1_k127_6594608_0 domain, Protein - - - 2.379e-206 666.0
DYD1_k127_6594608_1 Branched-chain amino acid transport system / permease component K01998 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002732 463.0
DYD1_k127_6594608_2 - - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000046 397.0
DYD1_k127_6594608_3 ATPases associated with a variety of cellular activities K01995 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006144 352.0
DYD1_k127_6594608_4 ABC transporter K01996 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001194 325.0
DYD1_k127_6594608_5 Branched-chain amino acid transport system / permease component K01998 - - 0.0000000000000000000000000000000000000000000000000000000000000000000007259 250.0
DYD1_k127_6618480_0 Part of a stress-induced multi-chaperone system, it is involved in the recovery of the cell from heat-induced damage, in cooperation with DnaK, DnaJ and GrpE K03695 - - 5.566e-208 655.0
DYD1_k127_6618480_1 smart pdz dhr glgf K04771,K04772 GO:0003674,GO:0003824,GO:0004175,GO:0004252,GO:0005575,GO:0005623,GO:0006508,GO:0006807,GO:0008150,GO:0008152,GO:0008233,GO:0008236,GO:0016787,GO:0017171,GO:0019538,GO:0030288,GO:0030313,GO:0031975,GO:0042597,GO:0043170,GO:0044238,GO:0044464,GO:0070011,GO:0071704,GO:0140096,GO:1901564 3.4.21.107 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001003 417.0
DYD1_k127_6627324_0 reductase, dissimilatory-type alpha subunit K11180 - 1.8.99.5 4.653e-239 744.0
DYD1_k127_6627324_1 reductase, dissimilatory-type beta subunit K11181 - 1.8.99.5 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004524 431.0
DYD1_k127_6627324_2 Taurine catabolism dioxygenase TauD, TfdA family - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000122 314.0
DYD1_k127_6627324_3 TIGRFAM CRISPR-associated protein - - - 0.000000000000000000000000000000000000000000000000000000000000000000000005392 250.0
DYD1_k127_6627324_4 part of a sulfur-relay system K11179 - - 0.000000000000000000000000004857 112.0
DYD1_k127_6627324_5 - - - - 0.00000000000000002964 89.0
DYD1_k127_6665360_0 Catalyzes the reduction of ribonucleotides to deoxyribonucleotides. May function to provide a pool of deoxyribonucleotide precursors for DNA repair during oxygen limitation and or for immediate growth after restoration of oxygen K00525 - 1.17.4.1 1.465e-277 867.0
DYD1_k127_6665360_1 DNA polymerase X family K02347 - - 4.737e-226 713.0
DYD1_k127_6665360_2 Catalyzes the synthesis of beta-nicotinate D- ribonucleotide from nicotinate and 5-phospho-D-ribose 1-phosphate at the expense of ATP K00763 GO:0001666,GO:0003674,GO:0003824,GO:0004516,GO:0005575,GO:0005623,GO:0005886,GO:0006139,GO:0006725,GO:0006732,GO:0006733,GO:0006753,GO:0006793,GO:0006796,GO:0006807,GO:0006950,GO:0008150,GO:0008152,GO:0009058,GO:0009108,GO:0009117,GO:0009165,GO:0009435,GO:0009605,GO:0009607,GO:0009628,GO:0009987,GO:0016020,GO:0016740,GO:0016757,GO:0016763,GO:0016874,GO:0016879,GO:0018130,GO:0019359,GO:0019362,GO:0019363,GO:0019365,GO:0019438,GO:0019637,GO:0019674,GO:0034355,GO:0034641,GO:0034654,GO:0036293,GO:0043094,GO:0043173,GO:0043207,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0044403,GO:0044419,GO:0044464,GO:0046483,GO:0046496,GO:0047280,GO:0050896,GO:0051186,GO:0051188,GO:0051701,GO:0051704,GO:0051707,GO:0055086,GO:0070482,GO:0071704,GO:0071944,GO:0072524,GO:0072525,GO:0075136,GO:0090407,GO:1901293,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576 6.3.4.21 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001654 587.0
DYD1_k127_6665360_3 Large family of predicted nucleotide-binding domains K07175 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001887 565.0
DYD1_k127_6665360_4 COG1335 Amidases related to nicotinamidase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001041 469.0
DYD1_k127_6665360_5 Protein of unknown function DUF72 - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005023 313.0
DYD1_k127_6665360_6 Haloacid dehalogenase-like hydrolase - - - 0.00000000000000000000274 105.0
DYD1_k127_6717305_0 belongs to the aldehyde dehydrogenase family K00135 - 1.2.1.16,1.2.1.20,1.2.1.79 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000213 538.0
DYD1_k127_6717305_1 Zinc-binding dehydrogenase K00001,K00055 - 1.1.1.1,1.1.1.90 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003268 520.0
DYD1_k127_6717305_2 Belongs to the binding-protein-dependent transport system permease family - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001055 374.0
DYD1_k127_6717305_3 Periplasmic binding protein domain K01999 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005189 367.0
DYD1_k127_6717305_4 Belongs to the binding-protein-dependent transport system permease family K01998 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000225 349.0
DYD1_k127_6717305_5 ATPases associated with a variety of cellular activities K01995 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007452 310.0
DYD1_k127_6717305_6 COG0410 ABC-type branched-chain amino acid transport systems ATPase component K01996 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000001117 269.0
DYD1_k127_6743817_0 amino acids such as valine, to avoid such errors it has two additional distinct tRNA(Ile)-dependent editing activities. One activity is designated as 'pretransfer' editing and involves the hydrolysis of activated Val-AMP. The other activity is designated 'posttransfer' editing and involves deacylation of mischarged Val-tRNA(Ile) K01870 - 6.1.1.5 0.0 1352.0
DYD1_k127_6743817_1 Involved in peptidoglycan biosynthesis. Transports lipid-linked peptidoglycan precursors from the inner to the outer leaflet of the cytoplasmic membrane K03980 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002187 561.0
DYD1_k127_6743817_10 Belongs to the bacterial ribosomal protein bL27 family K02899 GO:0000027,GO:0001558,GO:0003674,GO:0003735,GO:0005198,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0006412,GO:0006518,GO:0006807,GO:0006996,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0015934,GO:0016043,GO:0019538,GO:0022607,GO:0022613,GO:0022618,GO:0022625,GO:0022626,GO:0032991,GO:0034622,GO:0034641,GO:0034645,GO:0040008,GO:0042254,GO:0042255,GO:0042256,GO:0042273,GO:0043021,GO:0043022,GO:0043043,GO:0043170,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043603,GO:0043604,GO:0043933,GO:0044085,GO:0044087,GO:0044089,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:0044877,GO:0048518,GO:0050789,GO:0050794,GO:0051128,GO:0065003,GO:0065007,GO:0070925,GO:0071704,GO:0071826,GO:0071840,GO:0090069,GO:0090070,GO:1901564,GO:1901566,GO:1901576,GO:1902626,GO:1990904 - 0.00000000000000000000000000000000001181 136.0
DYD1_k127_6743817_11 This protein binds to 23S rRNA in the presence of protein L20 K02888 GO:0003674,GO:0003735,GO:0005198 - 0.000000000000000000000000001658 116.0
DYD1_k127_6743817_12 Binds directly to 16S ribosomal RNA K02968 GO:0000028,GO:0003674,GO:0003676,GO:0003723,GO:0003735,GO:0004857,GO:0005198,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0006412,GO:0006518,GO:0006807,GO:0006996,GO:0008073,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0015935,GO:0016043,GO:0019538,GO:0019843,GO:0022607,GO:0022613,GO:0022618,GO:0022626,GO:0022627,GO:0030234,GO:0032991,GO:0034622,GO:0034641,GO:0034645,GO:0042254,GO:0042255,GO:0042274,GO:0042979,GO:0043043,GO:0043086,GO:0043170,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043603,GO:0043604,GO:0043933,GO:0044085,GO:0044092,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:0050790,GO:0065003,GO:0065007,GO:0065009,GO:0070181,GO:0070925,GO:0071704,GO:0071826,GO:0071840,GO:0097159,GO:0098772,GO:1901363,GO:1901564,GO:1901566,GO:1901576,GO:1990904 - 0.0000000000000000006318 90.0
DYD1_k127_6743817_13 - - - - 0.0002844 47.0
DYD1_k127_6743817_2 Catalyzes the transfer of a phosphate group to glutamate to form L-glutamate 5-phosphate K00931 - 2.7.2.11 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001285 457.0
DYD1_k127_6743817_3 An essential GTPase which binds GTP, GDP and possibly (p)ppGpp with moderate affinity, with high nucleotide exchange rates and a fairly low GTP hydrolysis rate. Plays a role in control of the cell cycle, stress response, ribosome biogenesis and in those bacteria that undergo differentiation, in morphogenesis control K03979 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001471 436.0
DYD1_k127_6743817_4 LytB protein K03527 - 1.17.7.4 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007501 424.0
DYD1_k127_6743817_5 Belongs to the FPP GGPP synthase family K02523 - 2.5.1.90 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004734 407.0
DYD1_k127_6743817_6 Belongs to the ribF family K11753 - 2.7.1.26,2.7.7.2 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008839 380.0
DYD1_k127_6743817_7 Uncharacterized conserved protein (DUF2203) - - - 0.00000000000000000000000000000000000000009729 155.0
DYD1_k127_6743817_8 This protein specifically catalyzes the removal of signal peptides from prolipoproteins K03101 - 3.4.23.36 0.000000000000000000000000000000000000001026 156.0
DYD1_k127_6743817_9 Belongs to the Fur family K09826 - - 0.00000000000000000000000000000000000002582 147.0
DYD1_k127_6744375_0 GIY-YIG catalytic domain K07461 GO:0003674,GO:0003824,GO:0004518,GO:0004519,GO:0004520,GO:0004527,GO:0004529,GO:0004536,GO:0006139,GO:0006259,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0008296,GO:0008408,GO:0009987,GO:0016787,GO:0016788,GO:0016796,GO:0016895,GO:0034641,GO:0043170,GO:0044237,GO:0044238,GO:0044260,GO:0046483,GO:0071704,GO:0090304,GO:0090305,GO:0140097,GO:1901360 - 0.00000000000000000000003934 102.0
DYD1_k127_6744375_1 Tetratricopeptide TPR_2 repeat protein - - - 0.0000000000000000000006226 105.0
DYD1_k127_6744375_2 PFAM Cold-shock protein, DNA-binding K03704 - - 0.000000000000000000009978 93.0
DYD1_k127_6761471_0 peptidase, M20 - - - 2.019e-211 666.0
DYD1_k127_6761471_1 ATPase (AAA superfamily K07133 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003186 342.0
DYD1_k127_6761471_2 threonine synthase activity K01733,K15527 - 2.5.1.76,4.2.3.1 0.0000000000000000000000000000000000000000000000000000000000000003373 224.0
DYD1_k127_676697_0 Quinolinate synthetase A protein K03517 - 2.5.1.72 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000199 445.0
DYD1_k127_676697_1 PUA-like domain K00958 - 2.7.7.4 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001277 399.0
DYD1_k127_676697_2 COG1051 ADP-ribose pyrophosphatase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001476 308.0
DYD1_k127_6776801_0 Surface antigen K07277 - - 6.433e-243 773.0
DYD1_k127_6776801_1 zinc metalloprotease K11749 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003993 413.0
DYD1_k127_6776801_10 PFAM type II secretion system K02653 - - 0.0000000000000000000000000000000000000006704 151.0
DYD1_k127_6776801_11 Belongs to the skp family K06142 - - 0.0000000000000000000000000000000000007377 145.0
DYD1_k127_6776801_13 General secretion pathway protein J K02459 - - 0.000000000000000000001204 106.0
DYD1_k127_6776801_14 General secretion pathway protein I K02458 GO:0002790,GO:0006810,GO:0008104,GO:0008150,GO:0009306,GO:0009987,GO:0015031,GO:0015833,GO:0032940,GO:0033036,GO:0042886,GO:0045184,GO:0046903,GO:0051179,GO:0051234,GO:0071702,GO:0071705 - 0.00000000000000001497 90.0
DYD1_k127_6776801_15 involved in a type II secretion system (T2SS, formerly general secretion pathway, GSP) for the export of proteins K02462 GO:0008150,GO:0009405,GO:0044419,GO:0051704 - 0.000000000000004681 85.0
DYD1_k127_6776801_16 general secretion pathway protein K02457 - - 0.0000000000001313 78.0
DYD1_k127_6776801_2 Condensation of UDP-2,3-diacylglucosamine and 2,3- diacylglucosamine-1-phosphate to form lipid A disaccharide, a precursor of lipid A, a phosphorylated glycolipid that anchors the lipopolysaccharide to the outer membrane of the cell K00748 GO:0003674,GO:0003824,GO:0005488,GO:0005543,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005886,GO:0005975,GO:0006629,GO:0006643,GO:0006644,GO:0006664,GO:0006793,GO:0006796,GO:0008150,GO:0008152,GO:0008194,GO:0008289,GO:0008610,GO:0008654,GO:0008915,GO:0009058,GO:0009245,GO:0009247,GO:0009311,GO:0009312,GO:0009987,GO:0016020,GO:0016051,GO:0016740,GO:0016757,GO:0016758,GO:0019637,GO:0019897,GO:0019898,GO:0043167,GO:0043168,GO:0044237,GO:0044238,GO:0044249,GO:0044255,GO:0044424,GO:0044425,GO:0044444,GO:0044459,GO:0044464,GO:0046467,GO:0046493,GO:0071704,GO:0071944,GO:0090407,GO:1901135,GO:1901137,GO:1901269,GO:1901271,GO:1901576,GO:1903509 2.4.1.182 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002394 361.0
DYD1_k127_6776801_3 Udp N-acetylglucosamine O-acyltransferase; Domain 2 K00677 - 2.3.1.129 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006634 337.0
DYD1_k127_6776801_4 Catalyzes the N-acylation of UDP-3-O-acylglucosamine using 3-hydroxyacyl-ACP as the acyl donor. Is involved in the biosynthesis of lipid A, a phosphorylated glycolipid that anchors the lipopolysaccharide to the outer membrane of the cell K02536 GO:0003674,GO:0003824,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005975,GO:0006629,GO:0006643,GO:0006644,GO:0006664,GO:0006793,GO:0006796,GO:0008150,GO:0008152,GO:0008610,GO:0008654,GO:0009058,GO:0009245,GO:0009247,GO:0009311,GO:0009312,GO:0009987,GO:0016051,GO:0016410,GO:0016740,GO:0016746,GO:0016747,GO:0019637,GO:0042802,GO:0044237,GO:0044238,GO:0044249,GO:0044255,GO:0044424,GO:0044444,GO:0044464,GO:0046467,GO:0046493,GO:0071704,GO:0090407,GO:1901135,GO:1901137,GO:1901269,GO:1901271,GO:1901576,GO:1903509 2.3.1.191 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001575 309.0
DYD1_k127_6776801_5 general secretion pathway protein K K02460 - - 0.00000000000000000000000000000000000000000000000000000000000000000001972 250.0
DYD1_k127_6776801_6 Endonuclease that specifically degrades the RNA of RNA- DNA hybrids K03470 - 3.1.26.4 0.000000000000000000000000000000000000000000000000000000000000005026 223.0
DYD1_k127_6776801_7 General Secretion Pathway protein K02456 - - 0.000000000000000000000000000000000000000000000000000000003185 205.0
DYD1_k127_6776801_8 Involved in unsaturated fatty acids biosynthesis. Catalyzes the dehydration of short chain beta-hydroxyacyl-ACPs and long chain saturated and unsaturated beta-hydroxyacyl-ACPs K02372 - 4.2.1.59 0.00000000000000000000000000000000000000000000000008867 182.0
DYD1_k127_6776801_9 involved in a type II secretion system (T2SS, formerly general secretion pathway, GSP) for the export of proteins K02461 GO:0002790,GO:0006810,GO:0008104,GO:0008150,GO:0009306,GO:0009987,GO:0015031,GO:0015833,GO:0032940,GO:0033036,GO:0042886,GO:0045184,GO:0046903,GO:0051179,GO:0051234,GO:0071702,GO:0071705 - 0.0000000000000000000000000000000000000000000008462 183.0
DYD1_k127_6785969_0 May be involved in recombinational repair of damaged DNA K03631 GO:0000724,GO:0000725,GO:0006139,GO:0006259,GO:0006281,GO:0006302,GO:0006310,GO:0006725,GO:0006807,GO:0006950,GO:0006974,GO:0007154,GO:0008150,GO:0008152,GO:0009314,GO:0009432,GO:0009605,GO:0009628,GO:0009987,GO:0009991,GO:0031668,GO:0033554,GO:0034641,GO:0043170,GO:0044237,GO:0044238,GO:0044260,GO:0046483,GO:0050896,GO:0051716,GO:0071496,GO:0071704,GO:0090304,GO:1901360 - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007606 468.0
DYD1_k127_6785969_1 Belongs to the sodium neurotransmitter symporter (SNF) (TC 2.A.22) family K03308 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005843 385.0
DYD1_k127_6785969_10 Part of the outer membrane protein assembly complex, which is involved in assembly and insertion of beta-barrel proteins into the outer membrane K06186 - - 0.000000000000000000000009214 105.0
DYD1_k127_6785969_11 RnfH family Ubiquitin K09801 - - 0.00000000000000000000007344 101.0
DYD1_k127_6785969_12 LAGLIDADG-like domain - - - 0.0000000000000002346 82.0
DYD1_k127_6785969_2 Negative regulator of class I heat shock genes (grpE- dnaK-dnaJ and groELS operons). Prevents heat-shock induction of these operons K03705 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007497 362.0
DYD1_k127_6785969_3 Involved in the regulation of the intracellular balance of NAD and NADP, and is a key enzyme in the biosynthesis of NADP. Catalyzes specifically the phosphorylation on 2'-hydroxyl of the adenosine moiety of NAD to yield NADP K00858 - 2.7.1.23 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000003215 285.0
DYD1_k127_6785969_4 the 2 termini fold to resemble tRNA(Ala) and it encodes a tag peptide , a short internal open reading frame. During trans-translation Ala- aminoacylated tmRNA acts like a tRNA, entering the A-site of stalled ribosomes, displacing the stalled mRNA. The ribosome then switches to translate the ORF on the tmRNA K03664 - - 0.00000000000000000000000000000000000000000000000000000000000008868 218.0
DYD1_k127_6785969_5 Belongs to the Fur family K03711 - - 0.0000000000000000000000000000000000000000000000000000000002471 213.0
DYD1_k127_6785969_6 Heat shock 70 kDa protein K04043 - - 0.00000000000000000000000000000000000000000000004866 170.0
DYD1_k127_6785969_7 Cyclase dehydrase - - - 0.0000000000000000000000000000000000000000000001081 173.0
DYD1_k127_6785969_8 Belongs to the acetyltransferase family. ArgA subfamily K00619,K14681 GO:0003674,GO:0003824,GO:0004042,GO:0005488,GO:0005515,GO:0006082,GO:0006520,GO:0006525,GO:0006526,GO:0006591,GO:0006807,GO:0008080,GO:0008150,GO:0008152,GO:0008652,GO:0009058,GO:0009064,GO:0009084,GO:0009987,GO:0016043,GO:0016053,GO:0016407,GO:0016410,GO:0016740,GO:0016746,GO:0016747,GO:0019752,GO:0022607,GO:0040007,GO:0042450,GO:0042802,GO:0042803,GO:0043436,GO:0043933,GO:0044085,GO:0044237,GO:0044238,GO:0044249,GO:0044281,GO:0044283,GO:0046394,GO:0046983,GO:0051259,GO:0051260,GO:0051262,GO:0051289,GO:0065003,GO:0071704,GO:0071840,GO:1901564,GO:1901566,GO:1901576,GO:1901605,GO:1901607 2.3.1.1,4.3.2.1 0.00000000000000000000000000000000000000000002053 168.0
DYD1_k127_6785969_9 Participates actively in the response to hyperosmotic and heat shock by preventing the aggregation of stress-denatured proteins, in association with DnaK and GrpE. It is the nucleotide exchange factor for DnaK and may function as a thermosensor. Unfolded proteins bind initially to DnaJ K03687 - - 0.000000000000000000000000000000000000002075 155.0
DYD1_k127_6790638_0 Adenylate - - - 5.254e-304 966.0
DYD1_k127_6790638_1 Adenylyl- / guanylyl cyclase, catalytic domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000188 501.0
DYD1_k127_6790638_2 PFAM Glycosyl transferase family 2 - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000003666 275.0
DYD1_k127_6790638_3 tRNA synthetase subunit beta - - - 0.00000000000000000000000000000000000000000000000000000000000946 216.0
DYD1_k127_6790638_4 Amidase - - - 0.00000000000000000000000000000000000000000001382 166.0
DYD1_k127_6790638_5 - - - - 0.0000000000000000000000000000001849 125.0
DYD1_k127_6825061_0 periplasmic protein thiol disulfide K02199 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000001747 261.0
DYD1_k127_6825061_1 Cytochrome C biogenesis protein transmembrane region K06196 - - 0.000000000000000000000000000000000000000000000000000000000000002451 223.0
DYD1_k127_6825061_2 ATPase, P-type (transporting), HAD superfamily, subfamily IC K17686 - 3.6.3.54 0.0000000000000000000000000000000000000000000000006852 176.0
DYD1_k127_6825061_3 - - - - 0.0001765 46.0
DYD1_k127_6826216_0 Catalyzes the formation of the alpha-1,6-glucosidic linkages in glycogen by scission of a 1,4-alpha-linked oligosaccharide from growing alpha-1,4-glucan chains and the subsequent attachment of the oligosaccharide to the alpha-1,6 position K00700 - 2.4.1.18 2.056e-204 642.0
DYD1_k127_6826216_1 Belongs to the D-alanine--D-alanine ligase family K01921 - 6.3.2.4 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001707 415.0
DYD1_k127_6826216_2 Kef-type K transport K03455 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004315 371.0
DYD1_k127_6826216_3 Belongs to the aspartokinase family K00928 - 2.7.2.4 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000406 331.0
DYD1_k127_6826216_4 PFAM peptidase S15 K06978 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002997 308.0
DYD1_k127_6826216_5 - - - - 0.000000000000000000000000000000000001257 141.0
DYD1_k127_6826216_6 InterPro IPR007367 - - - 0.000000000000000000000000000000001147 130.0
DYD1_k127_6830213_0 serine protease K07403 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008391 481.0
DYD1_k127_6830213_1 Peptidase C26 K01658,K07010 - 4.1.3.27 0.000000000000000000000000000000000000000000000000000000000000000000000000001314 259.0
DYD1_k127_6830213_2 PFAM band 7 protein - - - 0.00003017 46.0
DYD1_k127_6833781_0 Predicted membrane protein (DUF2238) K08984 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000004077 277.0
DYD1_k127_6833781_1 Aminoacyl-tRNA editing domain - - - 0.0000000000000000000000000000000000000000000000000000001058 202.0
DYD1_k127_6833781_2 Toxic component of a toxin-antitoxin (TA) module K07171 - - 0.00000000000000000000000000001617 121.0
DYD1_k127_6833781_3 PFAM Uncharacterised protein family UPF0150 - - - 0.00000000000000000000004475 100.0
DYD1_k127_6833781_4 response to nickel cation - GO:0003674,GO:0003676,GO:0003677,GO:0005488,GO:0008150,GO:0040008,GO:0045926,GO:0045927,GO:0048518,GO:0048519,GO:0050789,GO:0065007,GO:0097159,GO:1901363 - 0.00000000000000000001086 95.0
DYD1_k127_6833781_5 - - - - 0.000000004215 63.0
DYD1_k127_6837028_0 Acts as a magnesium transporter K06213 - - 5.712e-208 658.0
DYD1_k127_6837028_1 PFAM porin Gram-negative type K03285 - - 0.000000000000005425 87.0
DYD1_k127_6837028_2 COG0457 FOG TPR repeat - - - 0.0000000001891 63.0
DYD1_k127_6845992_0 DNA polymerase III alpha subunit K02337 - 2.7.7.7 0.0 1276.0
DYD1_k127_6845992_1 General Secretion Pathway protein K02453 - - 0.00000000000000000000000000007302 124.0
DYD1_k127_6845992_2 General secretion pathway protein C K02452 - - 0.000000002179 68.0
DYD1_k127_6867946_0 Carbamoyl-phosphate synthetase ammonia chain K01955 GO:0000050,GO:0000166,GO:0003674,GO:0003824,GO:0004087,GO:0004088,GO:0005488,GO:0005524,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005951,GO:0006082,GO:0006139,GO:0006206,GO:0006220,GO:0006221,GO:0006520,GO:0006525,GO:0006526,GO:0006725,GO:0006753,GO:0006793,GO:0006796,GO:0006807,GO:0008144,GO:0008150,GO:0008152,GO:0008652,GO:0009058,GO:0009064,GO:0009084,GO:0009112,GO:0009117,GO:0009165,GO:0009218,GO:0009220,GO:0009259,GO:0009260,GO:0009987,GO:0016053,GO:0016597,GO:0016874,GO:0016879,GO:0016884,GO:0017076,GO:0018130,GO:0019438,GO:0019627,GO:0019637,GO:0019693,GO:0019752,GO:0019856,GO:0030554,GO:0031406,GO:0032553,GO:0032555,GO:0032559,GO:0032991,GO:0034641,GO:0034654,GO:0035639,GO:0036094,GO:0043167,GO:0043168,GO:0043169,GO:0043177,GO:0043436,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0044283,GO:0044424,GO:0044444,GO:0044464,GO:0046112,GO:0046390,GO:0046394,GO:0046483,GO:0046872,GO:0055086,GO:0071704,GO:0071941,GO:0072527,GO:0072528,GO:0090407,GO:0097159,GO:0097367,GO:1901135,GO:1901137,GO:1901265,GO:1901293,GO:1901360,GO:1901362,GO:1901363,GO:1901564,GO:1901566,GO:1901576,GO:1901605,GO:1901607,GO:1902494 6.3.5.5 0.0 1553.0
DYD1_k127_6867946_1 Belongs to the CarA family K01956 - 6.3.5.5 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002684 351.0
DYD1_k127_6867946_2 Necessary for efficient RNA polymerase transcription elongation past template-encoded arresting sites. The arresting sites in DNA have the property of trapping a certain fraction of elongating RNA polymerases that pass through, resulting in locked ternary complexes. Cleavage of the nascent transcript by cleavage factors such as GreA or GreB allows the resumption of elongation from the new 3'terminus. GreA releases sequences of 2 to 3 nucleotides K03624 - - 0.000000000000000000000000000000000000000000000000000000001272 204.0
DYD1_k127_6867946_3 Specifically methylates the uridine in position 2552 of 23S rRNA at the 2'-O position of the ribose in the fully assembled 50S ribosomal subunit K02427 - 2.1.1.166 0.0000000000000000000000000000000000000006624 152.0
DYD1_k127_6896649_0 NMT1-like family K07080 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004091 368.0
DYD1_k127_6896649_1 transport system fused permease components - - - 0.000000000000000000000000000000000000000000000000000000003142 220.0
DYD1_k127_6896649_2 D-isomer specific 2-hydroxyacid dehydrogenase catalytic region - - - 0.00000000000000000000000000000000000000000004271 163.0
DYD1_k127_6921514_0 One of the primary rRNA binding proteins. Required for association of the 30S and 50S subunits to form the 70S ribosome, for tRNA binding and peptide bond formation. It has been suggested to have peptidyltransferase activity K02886 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006378 442.0
DYD1_k127_6921514_1 One of the primary rRNA binding proteins, it binds directly near the 3'-end of the 23S rRNA, where it nucleates assembly of the 50S subunit K02906 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002686 313.0
DYD1_k127_6921514_2 One of the primary rRNA binding proteins, this protein initially binds near the 5'-end of the 23S rRNA. It is important during the early stages of 50S assembly. It makes multiple contacts with different domains of the 23S rRNA in the assembled 50S subunit and ribosome K02926 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000002918 289.0
DYD1_k127_6921514_3 Protein S19 forms a complex with S13 that binds strongly to the 16S ribosomal RNA K02965 - - 0.000000000000000000000000000000000000000001011 159.0
DYD1_k127_6921514_4 The globular domain of the protein is located near the polypeptide exit tunnel on the outside of the subunit, while an extended beta-hairpin is found that lines the wall of the exit tunnel in the center of the 70S ribosome K02890 - - 0.0000000000000000000000000000000000000001382 153.0
DYD1_k127_6921514_5 One of the early assembly proteins it binds 23S rRNA. One of the proteins that surrounds the polypeptide exit tunnel on the outside of the ribosome. Forms the main docking site for trigger factor binding to the ribosome K02892 - - 0.00000000000000000000000000000000319 139.0
DYD1_k127_6921514_6 Involved in the binding of tRNA to the ribosomes K02946 - - 0.00000000000000000000000000000003325 125.0
DYD1_k127_6933175_0 PFAM Integrase catalytic region - - - 2.089e-218 686.0
DYD1_k127_6933175_1 COG2801 Transposase and inactivated derivatives K07497 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000001368 280.0
DYD1_k127_6933175_2 PFAM transposase IS3 IS911 family protein K07483 - - 0.000000000000000000000000000000000000835 141.0
DYD1_k127_6933175_3 PFAM Integrase catalytic - - - 0.000003854 55.0
DYD1_k127_6946961_0 Molydopterin dinucleotide binding domain K00123 - 1.17.1.9 0.0 1495.0
DYD1_k127_6946961_1 PFAM Cytochrome bd ubiquinol oxidase, subunit I K00425 - 1.10.3.14 1.785e-245 767.0
DYD1_k127_6946961_10 PFAM periplasmic binding protein K02016 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006429 387.0
DYD1_k127_6946961_11 Prokaryotic cytochrome b561 K00127 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002979 381.0
DYD1_k127_6946961_12 Nucleotidase that shows phosphatase activity on nucleoside 5'-monophosphates K03787 - 3.1.3.5 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002328 367.0
DYD1_k127_6946961_13 DNA binding domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000597 364.0
DYD1_k127_6946961_14 ATPases associated with a variety of cellular activities K02013 - 3.6.3.34 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001275 339.0
DYD1_k127_6946961_15 May be involved in the biosynthesis of molybdopterin K03638 - 2.7.7.75 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000001652 277.0
DYD1_k127_6946961_16 plastoquinol--plastocyanin reductase activity - - - 0.00000000000000000000000000000000000000000000000000000000000000001359 232.0
DYD1_k127_6946961_17 MoeA N-terminal region (domain I and II) K03750 - 2.10.1.1 0.00000000000000000000000000000000000000000000000000000000000000192 227.0
DYD1_k127_6946961_18 PFAM cytoplasmic chaperone TorD family protein - - - 0.00000000000000000000000000000000000000000000000000000000000004841 220.0
DYD1_k127_6946961_19 ankyrin repeat K15503 - - 0.0000000000000000000000000000000000000000000000000000000000001337 225.0
DYD1_k127_6946961_2 PFAM 4Fe-4S ferredoxin iron-sulfur binding domain protein - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008006 606.0
DYD1_k127_6946961_20 PFAM molybdopterin biosynthesis MoaE K03635 - 2.8.1.12 0.0000000000000000000000000000000000000000000000000000000005368 206.0
DYD1_k127_6946961_21 molybdopterin-guanine dinucleotide biosynthesis protein K03753 - - 0.0000000000000000000000000000000000000000000000002519 182.0
DYD1_k127_6946961_22 Protein of unknown function (DUF3305) - - - 0.000000000000000000000000000000000000000000009906 168.0
DYD1_k127_6946961_23 Catalyzes the methyl esterification of L-isoaspartyl residues in peptides and proteins that result from spontaneous decomposition of normal L-aspartyl and L-asparaginyl residues. It plays a role in the repair and or degradation of damaged proteins K00573 - 2.1.1.77 0.0000000000000000000000000000000000000005243 150.0
DYD1_k127_6946961_24 Protein PsiE homolog K13256 GO:0005575,GO:0005623,GO:0005886,GO:0016020,GO:0044464,GO:0071944 - 0.0000000000000000000000000000000000006849 146.0
DYD1_k127_6946961_25 COG0666 FOG Ankyrin repeat K06867 - - 0.00000000000000000000000000005162 126.0
DYD1_k127_6946961_26 4Fe-4S binding domain - - - 0.0000000000000000000000000008108 121.0
DYD1_k127_6946961_27 Involved in sulfur transfer in the conversion of molybdopterin precursor Z to molybdopterin K03636 - - 0.000000000000000003667 87.0
DYD1_k127_6946961_28 Evidence 4 Homologs of previously reported genes of - - - 0.000000000000005147 77.0
DYD1_k127_6946961_3 PFAM ATP-binding region - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001955 558.0
DYD1_k127_6946961_31 Membrane bound YbgT-like protein K00424 - 1.10.3.14 0.0000002118 59.0
DYD1_k127_6946961_4 Cytochrome bd terminal oxidase subunit II K00426 - 1.10.3.14 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000963 494.0
DYD1_k127_6946961_5 Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains K02667 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006123 497.0
DYD1_k127_6946961_6 TIGRFAM molybdenum cofactor synthesis K03750 - 2.10.1.1 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008795 479.0
DYD1_k127_6946961_7 Catalyzes the cyclization of GTP to (8S)-3',8-cyclo-7,8- dihydroguanosine 5'-triphosphate K03639 - 4.1.99.22 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004704 458.0
DYD1_k127_6946961_8 Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily K02015 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004292 427.0
DYD1_k127_6946961_9 PFAM 4Fe-4S ferredoxin iron-sulfur binding domain protein K00124 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002331 402.0
DYD1_k127_6948545_0 Pyridine nucleotide-disulphide oxidoreductase K00266 - 1.4.1.13,1.4.1.14 6.601e-245 759.0
DYD1_k127_6948545_1 The transhydrogenation between NADH and NADP is coupled to respiration and ATP hydrolysis and functions as a proton pump across the membrane K00325 - 1.6.1.2 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004277 605.0
DYD1_k127_6948545_2 Catalyzes the decarboxylation of four acetate groups of uroporphyrinogen-III to yield coproporphyrinogen-III K01599 - 4.1.1.37 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004025 523.0
DYD1_k127_6948545_3 The transhydrogenation between NADH and NADP is coupled to respiration and ATP hydrolysis and functions as a proton pump across the membrane K00324 - 1.6.1.2 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008945 406.0
DYD1_k127_6948545_4 Catalyzes the methyl esterification of L-isoaspartyl residues in peptides and proteins that result from spontaneous decomposition of normal L-aspartyl and L-asparaginyl residues. It plays a role in the repair and or degradation of damaged proteins K00573 - 2.1.1.77 0.00000000000000000000000000000000000000000000000000002652 195.0
DYD1_k127_6948545_5 4TM region of pyridine nucleotide transhydrogenase, mitoch K00324 - 1.6.1.2 0.000000000000000000000000000000000000003132 147.0
DYD1_k127_6948545_6 - - - - 0.000000000004931 67.0
DYD1_k127_6948545_7 Protein of unknown function (DUF642) - - - 0.000000003393 69.0
DYD1_k127_6964982_0 Insecticidal toxin complex protein TcaC - - - 1.905e-222 736.0
DYD1_k127_6964982_1 Type II secretion system (T2SS), protein E, N-terminal domain K02454 - - 1.727e-215 683.0
DYD1_k127_6964982_10 PFAM type II secretion system K02456 - - 0.0000000000000000000000000000000000000000003276 161.0
DYD1_k127_6964982_11 - - - - 0.0000000000000000000000000009733 124.0
DYD1_k127_6964982_12 - - - - 0.00000000000000001542 89.0
DYD1_k127_6964982_13 carbon utilization - - - 0.00000000000001396 81.0
DYD1_k127_6964982_14 - - - - 0.0000000000003178 79.0
DYD1_k127_6964982_15 - - - - 0.00000000001101 77.0
DYD1_k127_6964982_2 Secretin and TonB N terminus short domain K02453 - - 2.197e-196 640.0
DYD1_k127_6964982_3 Peptidase family M48 - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000023 358.0
DYD1_k127_6964982_4 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase K00020 - 1.1.1.31 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001215 330.0
DYD1_k127_6964982_5 PFAM type II secretion system K02455,K02653 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002383 331.0
DYD1_k127_6964982_6 general secretion pathway protein G K02456 - - 0.00000000000000000000000000000000000000000000000000000000003135 208.0
DYD1_k127_6964982_7 Prokaryotic N-terminal methylation motif K02456 - - 0.0000000000000000000000000000000000000000000000000000000001876 209.0
DYD1_k127_6964982_8 - - - - 0.000000000000000000000000000000000000000000000000000000009559 208.0
DYD1_k127_6964982_9 Type II secretory pathway pseudopilin - - - 0.0000000000000000000000000000000000000000000000000002007 192.0
DYD1_k127_6982370_0 X-Pro dipeptidyl-peptidase C-terminal non-catalytic domain K06978 - - 2.736e-239 751.0
DYD1_k127_6982370_1 oxidoreductase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003871 374.0
DYD1_k127_6982370_2 Tripartite tricarboxylate transporter family receptor - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000001587 276.0
DYD1_k127_6982370_3 Protein conserved in bacteria - - - 0.00000000000000000000000000000000000000000003307 169.0
DYD1_k127_718010_0 TIGRFAM glutamine synthetase, type I K01915 - 6.3.1.2 6.253e-256 794.0
DYD1_k127_718010_1 Glycyl-tRNA synthetase beta subunit K01879 - 6.1.1.14 7.491e-228 727.0
DYD1_k127_718010_10 LemA family K03744 - - 0.0000000000000000000000000000000000000000000000000747 183.0
DYD1_k127_718010_11 Glutathione S-transferase K00799 - 2.5.1.18 0.0000000000000000000000000000000000000000000003247 173.0
DYD1_k127_718010_12 Peptidoglycan polymerase that catalyzes glycan chain elongation from lipid-linked precursors K03814 - 2.4.1.129 0.000000000000000000000000000000000000000007516 163.0
DYD1_k127_718010_13 Phosphoribosyl-ATP pyrophosphohydrolase - - - 0.0000000000000000000000000000000000000000126 156.0
DYD1_k127_718010_14 Belongs to the sulfur carrier protein TusA family - - - 0.000000000000000000000007735 104.0
DYD1_k127_718010_2 COG2204 Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains K07712 GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0044424,GO:0044444,GO:0044464 - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002489 611.0
DYD1_k127_718010_3 Thiamine biosynthesis protein (ThiI) - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003159 532.0
DYD1_k127_718010_4 Predicted membrane protein (DUF2207) - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001967 488.0
DYD1_k127_718010_5 Glycyl-tRNA synthetase alpha subunit K01878 - 6.1.1.14 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004093 462.0
DYD1_k127_718010_6 signal transduction histidine kinase K07708 - 2.7.13.3 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004566 353.0
DYD1_k127_718010_7 Phosphate acyltransferases K00655 - 2.3.1.51 0.000000000000000000000000000000000000000000000000000000000000000000000000002746 263.0
DYD1_k127_718010_8 Peptidase family M48 - - - 0.000000000000000000000000000000000000000000000000000000000002681 226.0
DYD1_k127_718010_9 D,D-heptose 1,7-bisphosphate phosphatase K03273 GO:0000287,GO:0003674,GO:0003824,GO:0005488,GO:0006793,GO:0006796,GO:0008150,GO:0008152,GO:0008270,GO:0009987,GO:0016311,GO:0016787,GO:0016788,GO:0016791,GO:0034200,GO:0042578,GO:0043167,GO:0043169,GO:0044237,GO:0046872,GO:0046914 3.1.3.82,3.1.3.83 0.00000000000000000000000000000000000000000000000000000004156 201.0
DYD1_k127_72084_0 Catalyzes the synthesis of GMP from XMP K01951 - 6.3.5.2 1.317e-242 759.0
DYD1_k127_72084_1 Catalyzes the conversion of inosine 5'-phosphate (IMP) to xanthosine 5'-phosphate (XMP), the first committed and rate- limiting step in the de novo synthesis of guanine nucleotides, and therefore plays an important role in the regulation of cell growth K00088 - 1.1.1.205 1.913e-227 713.0
DYD1_k127_72084_2 Murein-degrading enzyme that degrades murein glycan strands and insoluble, high-molecular weight murein sacculi, with the concomitant formation of a 1,6-anhydromuramoyl product. Lytic transglycosylases (LTs) play an integral role in the metabolism of the peptidoglycan (PG) sacculus. Their lytic action creates space within the PG sacculus to allow for its expansion as well as for the insertion of various structures such as secretion systems and flagella K18691 GO:0005575,GO:0005623,GO:0009279,GO:0016020,GO:0019867,GO:0030312,GO:0030313,GO:0031975,GO:0044462,GO:0044464,GO:0071944 - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009112 421.0
DYD1_k127_72084_3 Bidirectionally degrades single-stranded DNA into large acid-insoluble oligonucleotides, which are then degraded further into small acid-soluble oligonucleotides K03601 - 3.1.11.6 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003929 411.0
DYD1_k127_72084_4 serine threonine protein kinase K08282 - 2.7.11.1 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001277 358.0
DYD1_k127_72084_5 Catalyzes the deamination of adenosine to inosine at the wobble position 34 of tRNA(Arg2) K11991 - 3.5.4.33 0.00000000000000000000000000000000000000000000000000001068 195.0
DYD1_k127_72084_6 COG1961 Site-specific recombinases, DNA invertase Pin homologs - - - 0.00000000119 60.0
DYD1_k127_735657_0 Vitamin B12 dependent methionine synthase, activation K00548 - 2.1.1.13 0.0 1252.0
DYD1_k127_735657_1 radical SAM domain protein K04070 - 1.97.1.4 0.00000000000000000000000000000000000000004428 154.0
DYD1_k127_746901_0 Tripartite ATP-independent periplasmic transporter, DctM component - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001708 389.0
DYD1_k127_746901_1 TRAP transporter solute receptor, TAXI family K07080 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000001683 277.0
DYD1_k127_837638_0 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain K00175 - 1.2.7.11,1.2.7.3 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000152 453.0
DYD1_k127_837638_1 Belongs to the ompA family - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000001025 310.0
DYD1_k127_837638_2 Uracil DNA glycosylase superfamily K01934,K03649 GO:0000700,GO:0003674,GO:0003824,GO:0004844,GO:0006139,GO:0006259,GO:0006281,GO:0006284,GO:0006285,GO:0006725,GO:0006807,GO:0006950,GO:0006974,GO:0008150,GO:0008152,GO:0008263,GO:0009987,GO:0016787,GO:0016798,GO:0016799,GO:0019104,GO:0033554,GO:0034641,GO:0043170,GO:0044237,GO:0044238,GO:0044260,GO:0046483,GO:0050896,GO:0051716,GO:0071704,GO:0090304,GO:0097506,GO:0140097,GO:1901360 3.2.2.28,6.3.3.2 0.00000000000000000000000000000000000000000000000000000000000003709 226.0
DYD1_k127_837638_3 Pfam:DUF479 - - - 0.00000000000000000000000000000000000000000000000000167 189.0
DYD1_k127_843306_0 Pfam Sulfatase K01133 - 3.1.6.6 4.495e-222 699.0
DYD1_k127_843306_1 Bifunctional enzyme with both catalase and broad- spectrum peroxidase activity K03782 - 1.11.1.21 1.602e-216 677.0
DYD1_k127_843306_2 Protein of unknown function (DUF521) K09123 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003701 528.0
DYD1_k127_843306_3 Transcriptional regulator K04761 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008327 415.0
DYD1_k127_843306_4 Tripartite tricarboxylate transporter family receptor - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009606 329.0
DYD1_k127_843306_5 Methyltransferase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000113 295.0
DYD1_k127_843306_6 PFAM conserved - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000308 278.0
DYD1_k127_843306_7 Domain of unknown function DUF108 K06989 - 1.4.1.21 0.0000000000000000000000000000000000000000000000000000000000000000000000000195 258.0
DYD1_k127_843306_8 Protein of unknown function DUF126 K09128 - - 0.0000000000000000000000000000000000000000000000000000000000000005069 223.0
DYD1_k127_858565_0 Involved in the regulation of glutamine synthetase GlnA, a key enzyme in the process to assimilate ammonia. When cellular nitrogen levels are high, the C-terminal adenylyl transferase (AT) inactivates GlnA by covalent transfer of an adenylyl group from ATP to specific tyrosine residue of GlnA, thus reducing its activity. Conversely, when nitrogen levels are low, the N-terminal adenylyl removase (AR) activates GlnA by removing the adenylyl group by phosphorolysis, increasing its activity. The regulatory region of GlnE binds the signal transduction protein PII (GlnB) which indicates the nitrogen status of the cell K00982 - 2.7.7.42,2.7.7.89 3.226e-283 899.0
DYD1_k127_858565_1 Prevents misfolding and promotes the refolding and proper assembly of unfolded polypeptides generated under stress conditions K04077 - - 1.716e-267 832.0
DYD1_k127_858565_10 divalent ion tolerance protein K03926 - - 0.0000000000000000000000000004135 117.0
DYD1_k127_858565_11 Catalyzes the synthesis of 5,6-dihydrouridine (D), a modified base found in the D-loop of most tRNAs, via the reduction of the C5-C6 double bond in target uridines K05540 - - 0.000000000000000000000000006107 113.0
DYD1_k127_858565_12 PFAM FxsA cytoplasmic membrane protein K07113 - - 0.000000000000000000000000009484 114.0
DYD1_k127_858565_13 Protein of unknown function (DUF3426) - - - 0.00000000000000000000000002085 118.0
DYD1_k127_858565_14 Zinc-finger domain - - - 0.00000000000000000000492 93.0
DYD1_k127_858565_15 Required to facilitate the formation of correct disulfide bonds in some periplasmic proteins and for the assembly of the periplasmic c-type cytochromes. Acts by transferring electrons from cytoplasmic thioredoxin to the periplasm. This transfer involves a cascade of disulfide bond formation and reduction steps K04084 - 1.8.1.8 0.000000000000000002344 91.0
DYD1_k127_858565_16 Required to facilitate the formation of correct disulfide bonds in some periplasmic proteins and for the assembly of the periplasmic c-type cytochromes. Acts by transferring electrons from cytoplasmic thioredoxin to the periplasm. This transfer involves a cascade of disulfide bond formation and reduction steps K04084 - 1.8.1.8 0.000004807 51.0
DYD1_k127_858565_2 TIGRFAM acetyl-CoA carboxylase, biotin carboxylase K01961 - 6.3.4.14,6.4.1.2 1.797e-224 709.0
DYD1_k127_858565_3 Glutamine synthetase, catalytic domain K01915 - 6.3.1.2 1.068e-221 697.0
DYD1_k127_858565_4 Belongs to the class-IV pyridoxal-phosphate-dependent aminotransferase family K00826 - 2.6.1.42 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000576 518.0
DYD1_k127_858565_5 O-methyltransferase K00588 - 2.1.1.104 0.00000000000000000000000000000000000000000000000000000000000000000000000001925 256.0
DYD1_k127_858565_6 Methylates ribosomal protein L11 K02687 GO:0003674,GO:0003824,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006464,GO:0006479,GO:0006480,GO:0006807,GO:0008150,GO:0008152,GO:0008168,GO:0008170,GO:0008213,GO:0008276,GO:0008757,GO:0009987,GO:0016278,GO:0016279,GO:0016740,GO:0016741,GO:0018011,GO:0018012,GO:0018022,GO:0018023,GO:0018193,GO:0018194,GO:0018205,GO:0019538,GO:0031365,GO:0032259,GO:0036211,GO:0043170,GO:0043412,GO:0043414,GO:0044237,GO:0044238,GO:0044260,GO:0044267,GO:0044424,GO:0044444,GO:0044464,GO:0071704,GO:0140096,GO:1901564 - 0.00000000000000000000000000000000000000000000000000000000000002922 226.0
DYD1_k127_858565_7 Catalyzes a trans-dehydration via an enolate intermediate K03786 - 4.2.1.10 0.0000000000000000000000000000000000000000000000000000000001011 206.0
DYD1_k127_858565_8 first, biotin carboxylase catalyzes the carboxylation of the carrier protein and then the transcarboxylase transfers the carboxyl group to form malonyl-CoA K02160 GO:0003674,GO:0003824,GO:0003989,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006082,GO:0006464,GO:0006629,GO:0006631,GO:0006633,GO:0006807,GO:0008150,GO:0008152,GO:0008610,GO:0009058,GO:0009305,GO:0009987,GO:0016049,GO:0016053,GO:0016421,GO:0016874,GO:0016885,GO:0019538,GO:0019752,GO:0032787,GO:0036211,GO:0040007,GO:0043170,GO:0043412,GO:0043436,GO:0044237,GO:0044238,GO:0044249,GO:0044255,GO:0044260,GO:0044267,GO:0044281,GO:0044283,GO:0044424,GO:0044444,GO:0044464,GO:0046394,GO:0071704,GO:0072330,GO:1901564,GO:1901576 - 0.0000000000000000000000000000000000000000000000001078 181.0
DYD1_k127_858565_9 Binds to Cpn60 in the presence of Mg-ATP and suppresses the ATPase activity of the latter K04078 - - 0.0000000000000000000000000000000000000000001257 163.0
DYD1_k127_875051_0 Type II secretion system (T2SS), protein F K02455,K12278 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001946 484.0
DYD1_k127_875051_1 -O-antigen K02847,K13009,K16705 GO:0003674,GO:0003824,GO:0006464,GO:0006486,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009100,GO:0009101,GO:0009987,GO:0016740,GO:0016757,GO:0019538,GO:0034645,GO:0036211,GO:0043170,GO:0043412,GO:0043413,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0070085,GO:0071704,GO:1901135,GO:1901137,GO:1901564,GO:1901566,GO:1901576 - 0.0000000000000000000000000000000000000000004684 178.0
DYD1_k127_875051_2 general secretion pathway protein K02456 - - 0.0000000000005827 77.0
DYD1_k127_875051_3 Prokaryotic N-terminal methylation motif K10926 - - 0.00000000138 70.0
DYD1_k127_875051_4 Prokaryotic N-terminal methylation motif K10924 - - 0.00000000549 62.0
DYD1_k127_875051_5 Type II secretion system (T2SS), protein E, N-terminal domain K02454,K12276 - - 0.00001049 50.0
DYD1_k127_884198_0 Belongs to the AlaDH PNT family K00259 - 1.4.1.1 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005486 409.0
DYD1_k127_884198_1 Belongs to the class-II pyridine nucleotide-disulfide oxidoreductase family K00384 - 1.8.1.9 0.000000000000000000000000000000000000000000000000002075 184.0
DYD1_k127_884198_2 DNA segregation ATPase FtsK SpoIIIE K03466 - - 0.00000000000000000000000000000000000000000000001024 178.0
DYD1_k127_911783_0 Catalyzes the attachment of proline to tRNA(Pro) in a two-step reaction proline is first activated by ATP to form Pro- AMP and then transferred to the acceptor end of tRNA(Pro). As ProRS can inadvertently accommodate and process non-cognate amino acids such as alanine and cysteine, to avoid such errors it has two additional distinct editing activities against alanine. One activity is designated as 'pretransfer' editing and involves the tRNA(Pro)-independent hydrolysis of activated Ala-AMP. The other activity is designated 'posttransfer' editing and involves deacylation of mischarged Ala-tRNA(Pro). The misacylated Cys- tRNA(Pro) is not edited by ProRS K01881 - 6.1.1.15 6.448e-229 718.0
DYD1_k127_911783_1 Phosphoribosylformylglycinamidine cyclo-ligase K01933 - 6.3.3.1 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001497 442.0
DYD1_k127_911783_10 pfam nudix K03574 - 3.6.1.55 0.0000000000000000000000000000000147 128.0
DYD1_k127_911783_11 acylphosphatase K01512 - 3.6.1.7 0.00000000000000000000002488 101.0
DYD1_k127_911783_12 - - - - 0.0000000001142 68.0
DYD1_k127_911783_2 Belongs to the WrbA family K03809 - 1.6.5.2 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000557 284.0
DYD1_k127_911783_3 Catalyzes the transfer of a formyl group from 10- formyltetrahydrofolate to 5-phospho-ribosyl-glycinamide (GAR), producing 5-phospho-ribosyl-N-formylglycinamide (FGAR) and tetrahydrofolate K11175 - 2.1.2.2 0.0000000000000000000000000000000000000000000000000000000000000000000000000000006504 269.0
DYD1_k127_911783_4 PFAM Lytic transglycosylase catalytic - - - 0.000000000000000000000000000000000000000000000000000000000001056 214.0
DYD1_k127_911783_5 PFAM Tellurite resistance protein TehB - - - 0.000000000000000000000000000000000000000000000000000000001964 206.0
DYD1_k127_911783_6 Belongs to the DnaA family. HdA subfamily K10763 - - 0.00000000000000000000000000000000000000000000000000000766 197.0
DYD1_k127_911783_7 PFAM CDP-alcohol phosphatidyltransferase K08744 - 2.7.8.41 0.00000000000000000000000000000000000000006506 158.0
DYD1_k127_911783_8 LysM domain - - - 0.0000000000000000000000000000000005204 138.0
DYD1_k127_911783_9 Sigma-70, region 4 K03088 - - 0.000000000000000000000000000000001825 136.0
DYD1_k127_917814_0 Produces ATP from ADP in the presence of a proton gradient across the membrane. The catalytic sites are hosted primarily by the beta subunits K02112 - 3.6.3.14 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009133 462.0
DYD1_k127_917814_1 Produces ATP from ADP in the presence of a proton gradient across the membrane. The gamma chain is believed to be important in regulating ATPase activity and the flow of protons through the CF(0) complex K02115 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006715 410.0
DYD1_k127_938536_0 spore germination - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000008748 267.0
DYD1_k127_945137_0 Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain K03520 - 1.2.5.3 0.0 1134.0
DYD1_k127_945137_1 Serine dehydratase beta chain K01752 - 4.3.1.17 7.829e-220 691.0
DYD1_k127_945137_2 signal transduction protein containing a membrane domain, an EAL and a GGDEF domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008 608.0
DYD1_k127_945137_3 ABC transporter substrate binding protein - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004914 353.0
DYD1_k127_945137_4 COG0491 Zn-dependent hydrolases, including glyoxylases - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002075 332.0
DYD1_k127_945137_5 [2Fe-2S] binding domain K03518 - 1.2.5.3 0.0000000000000000000000000000000000000000000000000000000000000000000000000000002232 269.0
DYD1_k127_945137_6 carbon monoxide dehydrogenase K09386 - - 0.00000000000000000000000000000000000000000000000000000005288 201.0
DYD1_k127_945137_7 Aerobic-type carbon monoxide dehydrogenase, middle subunit CoxM K03519 - 1.2.5.3 0.000000000000000000000000000000004671 132.0
DYD1_k127_945137_8 ornithine cyclodeaminase K01750 GO:0003674,GO:0003824,GO:0008150,GO:0008152,GO:0016491,GO:0016638,GO:0016639,GO:0055114 4.3.1.12 0.0000000000000006129 80.0
DYD1_k127_945137_9 Bacterial antitoxin of type II TA system, VapB - - - 0.000000003321 59.0
DYD1_k127_952970_0 Fumarate reductase flavoprotein C-term - - - 1.189e-276 862.0
DYD1_k127_952970_1 TRAP transporter, 4TM 12TM fusion protein - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001787 517.0
DYD1_k127_952970_10 Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family K16843 - 1.1.1.310 0.00000000000000007963 83.0
DYD1_k127_952970_11 Tartrate K01677 - 4.2.1.2 0.000002543 53.0
DYD1_k127_952970_12 response regulator receiver K07684 - - 0.0000315 50.0
DYD1_k127_952970_2 Tartrate K01677 - 4.2.1.2 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003517 442.0
DYD1_k127_952970_3 Ring hydroxylating alpha subunit (catalytic domain) K16968 - 1.14.13.111 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000418 368.0
DYD1_k127_952970_4 Oxidoreductase FAD-binding domain K15765 - 1.18.1.3 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001997 364.0
DYD1_k127_952970_5 Fumarase C-terminus K01678,K03780 - 4.2.1.2,4.2.1.32 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009971 316.0
DYD1_k127_952970_6 Ring hydroxylating beta subunit K16969 - 1.14.13.111 0.00000000000000000000000000000000000000000000000000000000001535 210.0
DYD1_k127_952970_7 TIGRFAM TRAP transporter solute receptor, TAXI family K07080 - - 0.0000000000000000000000000000000000000003633 164.0
DYD1_k127_952970_8 Rieske [2Fe-2S] domain K15762 - - 0.000000000000000000000000000000002322 135.0
DYD1_k127_952970_9 Rieske [2Fe-2S] domain K15762 - - 0.000000000000000000000003244 107.0
DYD1_k127_964544_0 SNARE associated Golgi protein - - - 0.000000000000000000000000000000000000000000000000000000001831 210.0
DYD1_k127_964544_1 Membrane - - - 0.00000000000000000000000000000000000009125 145.0
DYD1_k127_964544_2 DoxX K15977 - - 0.000000000000000000000000000000000004118 138.0
DYD1_k127_964544_3 Protein of unknown function (DUF433) - - - 0.000000000000000000000006379 103.0
DYD1_k127_964544_4 - - - - 0.0000000000003614 77.0
DYD1_k127_964544_5 - - - - 0.00000000008566 67.0
DYD1_k127_964544_6 YHS domain K06966 - 3.2.2.10 0.0000003456 54.0
DYD1_k127_970677_0 Adenylate cyclase K01768 - 4.6.1.1 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007971 523.0
DYD1_k127_974648_0 PFAM Aminoglycoside phosphotransferase K07102 - 2.7.1.221 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003326 354.0
DYD1_k127_974648_1 PFAM Nucleotidyl transferase K00992 - 2.7.7.99 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000001496 303.0
DYD1_k127_981149_0 PFAM Major facilitator superfamily - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001332 445.0
DYD1_k127_981149_1 Transcriptional regulator - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002527 403.0
DYD1_k127_981149_2 GMP synthase (glutamine-hydrolyzing) activity - - - 0.0000000000000000000000000000000000000000000000000000000000000000000006296 246.0
DYD1_k127_981149_3 - - - - 0.000000000000000000002411 100.0
DYD1_k127_998622_0 ABC transporter transmembrane region K02021 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008984 432.0
DYD1_k127_998622_1 PFAM Integral membrane protein TerC - - - 0.000000000000000000000000000000000000000000000000004008 185.0