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Overview

ID MAG00887
Name DYD1_bin.77
Sample SMP0025
Taxonomy
Kingdom Bacteria
Phylum Acidobacteriota
Class HRBIN11
Order JAKEFK01
Family JAKEFK01
Genus
Species
Assembly information
Completeness (%) 55.82
Contamination (%) 0.1
GC content (%) 50.0
N50 (bp) 4,140
Genome size (bp) 3,042,674

Location

Module

Module ID Module name Total genes Total steps Contain genes Contain steps Percentage of genes Percentage of steps

Genes2631

Gene name Description KEGG GOs EC E-value Score Sequence
DYD1_k127_1014710_0 Type II/IV secretion system protein K02669 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002988 366.0
DYD1_k127_1014710_1 Cysteine-rich motif following a subset of SET domains K07117 - - 0.000000000000000000000000000000000000000000942 162.0
DYD1_k127_1017104_0 ABC-type transport system involved in lipoprotein release permease component K02004 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000784 425.0
DYD1_k127_1017104_1 MacB-like periplasmic core domain K02004 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002062 394.0
DYD1_k127_1017104_2 Heavy-metal-associated domain K01533,K17686 - 3.6.3.4,3.6.3.54 0.00000000000000000000000000000000000000000000000000000000177 206.0
DYD1_k127_1017104_3 Domain of unknown function (DUF4388) - - - 0.0000936 54.0
DYD1_k127_1018096_0 Serine threonine protein kinase K12132 - 2.7.11.1 0.000000000000000000000000000000000000000000000000000000000000000001847 249.0
DYD1_k127_1018096_1 Carboxypeptidase regulatory-like domain - - - 0.0000000000000000000000000000000000000000000000008602 183.0
DYD1_k127_1018096_2 PFAM Response regulator receiver domain - - - 0.00000000000000000000000000000000009746 152.0
DYD1_k127_102865_0 arylsulfatase activity K01133 - 3.1.6.6 0.000000000000000000000000000000000000000005986 173.0
DYD1_k127_102865_1 ABC transporter, ATP-binding protein K06158 - - 0.0000000000000000003652 91.0
DYD1_k127_102865_2 - - - - 0.00000003131 63.0
DYD1_k127_1030811_0 Protein tyrosine kinase K12132 - 2.7.11.1 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001108 408.0
DYD1_k127_1030811_1 DNA-templated transcription, initiation K02405 - - 0.000000000000000000000000000000000000000000000000000003321 198.0
DYD1_k127_1030811_2 Putative metal-binding motif - - - 0.00002571 57.0
DYD1_k127_1066686_0 Acts as a processive, ATP-dependent zinc metallopeptidase for both cytoplasmic and membrane proteins. Plays a role in the quality control of integral membrane proteins K03798 GO:0000166,GO:0003674,GO:0003824,GO:0004175,GO:0004176,GO:0004222,GO:0005488,GO:0005515,GO:0005524,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005886,GO:0005887,GO:0006508,GO:0006807,GO:0006950,GO:0006979,GO:0008144,GO:0008150,GO:0008152,GO:0008233,GO:0008237,GO:0008270,GO:0009056,GO:0009057,GO:0010468,GO:0016020,GO:0016021,GO:0016462,GO:0016787,GO:0016817,GO:0016818,GO:0016887,GO:0017076,GO:0017111,GO:0019222,GO:0019538,GO:0030145,GO:0030163,GO:0030554,GO:0031224,GO:0031226,GO:0032553,GO:0032555,GO:0032559,GO:0032991,GO:0035639,GO:0036094,GO:0040007,GO:0042623,GO:0042802,GO:0043167,GO:0043168,GO:0043169,GO:0043170,GO:0043273,GO:0044238,GO:0044424,GO:0044425,GO:0044444,GO:0044459,GO:0044464,GO:0046872,GO:0046914,GO:0050789,GO:0050896,GO:0060255,GO:0065007,GO:0070011,GO:0071704,GO:0071944,GO:0097159,GO:0097367,GO:0098796,GO:0140096,GO:1901265,GO:1901363,GO:1901564,GO:1901565,GO:1901575 - 2.053e-226 712.0
DYD1_k127_1066686_1 Belongs to the purine pyrimidine phosphoribosyltransferase family K00760 - 2.4.2.8 0.0000000000000000000000000000000000000000000000002891 180.0
DYD1_k127_1066686_2 Catalyzes the condensation of para-aminobenzoate (pABA) with 6-hydroxymethyl-7,8-dihydropterin diphosphate (DHPt-PP) to form 7,8-dihydropteroate (H2Pte), the immediate precursor of folate derivatives K00796 - 2.5.1.15 0.0000000000000000000000000000000000002506 145.0
DYD1_k127_1066686_3 Acts as a processive, ATP-dependent zinc metallopeptidase for both cytoplasmic and membrane proteins. Plays a role in the quality control of integral membrane proteins K03798 GO:0000166,GO:0003674,GO:0003824,GO:0004175,GO:0004176,GO:0004222,GO:0005488,GO:0005515,GO:0005524,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005886,GO:0005887,GO:0006508,GO:0006807,GO:0006950,GO:0006979,GO:0008144,GO:0008150,GO:0008152,GO:0008233,GO:0008237,GO:0008270,GO:0009056,GO:0009057,GO:0010468,GO:0016020,GO:0016021,GO:0016462,GO:0016787,GO:0016817,GO:0016818,GO:0016887,GO:0017076,GO:0017111,GO:0019222,GO:0019538,GO:0030145,GO:0030163,GO:0030554,GO:0031224,GO:0031226,GO:0032553,GO:0032555,GO:0032559,GO:0032991,GO:0035639,GO:0036094,GO:0040007,GO:0042623,GO:0042802,GO:0043167,GO:0043168,GO:0043169,GO:0043170,GO:0043273,GO:0044238,GO:0044424,GO:0044425,GO:0044444,GO:0044459,GO:0044464,GO:0046872,GO:0046914,GO:0050789,GO:0050896,GO:0060255,GO:0065007,GO:0070011,GO:0071704,GO:0071944,GO:0097159,GO:0097367,GO:0098796,GO:0140096,GO:1901265,GO:1901363,GO:1901564,GO:1901565,GO:1901575 - 0.00008879 48.0
DYD1_k127_1084137_0 Belongs to the UbiD family K03182 - 4.1.1.98 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004717 607.0
DYD1_k127_1084137_1 PBS lyase HEAT-like repeat - - - 0.000001247 61.0
DYD1_k127_1090356_0 Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family K01993,K16922 - - 0.00000000000000000000000000000000000000004533 172.0
DYD1_k127_1090356_1 Glycosyltransferase family 9 (heptosyltransferase) - - - 0.000000000000000004816 87.0
DYD1_k127_1090356_2 STAS domain K04749 - - 0.000000000000000004976 89.0
DYD1_k127_1090356_3 Glycosyltransferase family 9 (heptosyltransferase) - - - 0.00000000000000001548 86.0
DYD1_k127_1090356_4 Dolichyl-phosphate-mannose-protein mannosyltransferase - - - 0.00000000000002041 86.0
DYD1_k127_1096114_0 AAA domain, putative AbiEii toxin, Type IV TA system - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002685 372.0
DYD1_k127_1096114_1 efflux transmembrane transporter activity - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001653 342.0
DYD1_k127_110350_0 Catalyzes the ATP-dependent amidation of deamido-NAD to form NAD. Uses L-glutamine as a nitrogen source K01950 - 6.3.5.1 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003306 450.0
DYD1_k127_110350_1 Catalyzes the synthesis of beta-nicotinate D- ribonucleotide from nicotinate and 5-phospho-D-ribose 1-phosphate at the expense of ATP K00763 - 6.3.4.21 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002155 444.0
DYD1_k127_110350_2 Metallo-beta-lactamase superfamily - - - 0.0000000000000000000000000000000000000000000000000000002303 206.0
DYD1_k127_110350_3 SMART ATP-binding region ATPase domain protein - - - 0.000000000000000000000000004122 121.0
DYD1_k127_1114085_0 Catalyzes the reversible interconversion of serine and glycine with tetrahydrofolate (THF) serving as the one-carbon carrier. This reaction serves as the major source of one-carbon groups required for the biosynthesis of purines, thymidylate, methionine, and other important biomolecules. Also exhibits THF- independent aldolase activity toward beta-hydroxyamino acids, producing glycine and aldehydes, via a retro-aldol mechanism K00600 - 2.1.2.1 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002852 555.0
DYD1_k127_1114085_1 Catalyzes the deamination of 5-methylthioadenosine and S-adenosyl-L-homocysteine into 5-methylthioinosine and S-inosyl-L- homocysteine, respectively. Is also able to deaminate adenosine K12960,K20810 GO:0003674,GO:0003824,GO:0016787,GO:0016810,GO:0016814,GO:0019239,GO:0050270 3.5.4.28,3.5.4.31,3.5.4.40 0.0000000000000000000000000000000000000000000000000000000000000000000000000002871 272.0
DYD1_k127_1114085_2 SMART helicase c2 K03722 - 3.6.4.12 0.000000000000000000000000000000000000000000000000000000000000001171 226.0
DYD1_k127_1114085_3 Uncharacterised protein family UPF0047 - - - 0.000000000000000000000000000000000007698 141.0
DYD1_k127_1114085_4 Yqey-like protein K09117 - - 0.00000000000000000000000000271 117.0
DYD1_k127_1120238_0 - - - - 0.00000000000000000000000000000002668 137.0
DYD1_k127_1120238_1 cGMP-dependent protein kinase activity K07376 - 2.7.11.12 0.0000000000000003506 83.0
DYD1_k127_1139742_0 RmuC family K09760 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000001061 265.0
DYD1_k127_1139742_1 PFAM PKD domain containing protein - - - 0.000000000000000000000000000000249 138.0
DYD1_k127_1139742_2 Belongs to the short-chain dehydrogenases reductases (SDR) family - - - 0.00000000005086 69.0
DYD1_k127_1153643_0 Serine aminopeptidase, S33 - - - 0.00000000000000000000000000000000000000000000000000000000000000000000009745 246.0
DYD1_k127_1153643_1 Peptidase family M23 - - - 0.00000000000000000000000000000000000205 158.0
DYD1_k127_1153643_2 Participates in the translocation of lipoproteins from the inner membrane to the outer membrane. Only forms a complex with a lipoprotein if the residue after the N-terminal Cys is not an aspartate (The Asp acts as a targeting signal to indicate that the lipoprotein should stay in the inner membrane) - - - 0.00000000007971 75.0
DYD1_k127_1154499_0 Cell division protein that is involved in the assembly of the Z ring. May serve as a membrane anchor for the Z ring K03590 GO:0000166,GO:0003674,GO:0005488,GO:0005515,GO:0005524,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005886,GO:0008144,GO:0008150,GO:0009898,GO:0009987,GO:0016020,GO:0017076,GO:0030554,GO:0032153,GO:0032553,GO:0032555,GO:0032559,GO:0035639,GO:0036094,GO:0042802,GO:0043167,GO:0043168,GO:0044424,GO:0044425,GO:0044444,GO:0044459,GO:0044464,GO:0051301,GO:0071944,GO:0097159,GO:0097367,GO:0098552,GO:0098562,GO:1901265,GO:1901363 - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009956 423.0
DYD1_k127_1154499_1 cell wall formation K00075 - 1.3.1.98 0.000000000000000000000000000000000000000000000000000000000000008843 227.0
DYD1_k127_1154499_2 Essential cell division protein K03589 - - 0.00000000000001885 83.0
DYD1_k127_1161115_0 Methyltransferase K08316 - 2.1.1.171 0.0000000000000000000000000000001818 129.0
DYD1_k127_1161115_1 TM2 domain - - - 0.0000000000000000000000000000009128 126.0
DYD1_k127_1161115_2 Ribosomal protein S16 K02959 GO:0003674,GO:0003735,GO:0005198,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005840,GO:0006412,GO:0006518,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0015935,GO:0019538,GO:0032991,GO:0034641,GO:0034645,GO:0043043,GO:0043170,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044446,GO:0044464,GO:0071704,GO:1901564,GO:1901566,GO:1901576,GO:1990904 - 0.000000000000000004582 85.0
DYD1_k127_1161115_3 TM2 domain - - - 0.0000000000000002613 84.0
DYD1_k127_1161115_4 Protein of unknown function (DUF2752) - - - 0.00000000000277 72.0
DYD1_k127_1166383_0 The UvrABC repair system catalyzes the recognition and processing of DNA lesions. UvrA is an ATPase and a DNA-binding protein. A damage recognition complex composed of 2 UvrA and 2 UvrB subunits scans DNA for abnormalities. When the presence of a lesion has been verified by UvrB, the UvrA molecules dissociate K03701 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000674 304.0
DYD1_k127_1166383_1 Glycosyl transferase 4-like domain - - - 0.000000000000000000000000000000000000000000000000000000009665 207.0
DYD1_k127_1166383_2 Lysylphosphatidylglycerol synthase TM region K07027 - - 0.000000000000000000000000000000000000004522 158.0
DYD1_k127_1166383_3 Methyltransferase domain - - - 0.000000000000000000000000004918 120.0
DYD1_k127_1167805_0 PFAM glycosyl transferase family 20 K00697,K16055 - 2.4.1.15,2.4.1.347,3.1.3.12 4.644e-261 823.0
DYD1_k127_1167805_1 Tetratricopeptide repeat - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000002028 287.0
DYD1_k127_1167805_2 Antioxidant protein with alkyl hydroperoxidase activity. Required for the reduction of the AhpC active site cysteine residues and for the regeneration of the AhpC enzyme activity - - - 0.00000000000000000000000004027 111.0
DYD1_k127_1167805_3 Vitamin K epoxide reductase family - - - 0.0000000000000004014 85.0
DYD1_k127_117445_0 Protein of unknown function (DUF2911) - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006515 390.0
DYD1_k127_117445_1 response to oxidative stress K04063 - - 0.0000000000000000000000002253 109.0
DYD1_k127_1176260_0 Alpha amylase, catalytic region K06044 - 5.4.99.15 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001288 362.0
DYD1_k127_1176260_1 Virulence factor BrkB K07058 - - 0.0000000000000000000000000000000000007022 151.0
DYD1_k127_117689_0 beta-lactamase domain protein - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004691 334.0
DYD1_k127_117689_1 PFAM Ankyrin repeat K06867 - - 0.0000000000000000000000000000000000000000000000000008067 202.0
DYD1_k127_117689_2 PFAM DJ-1 PfpI family K05520 - 3.5.1.124 0.0000000000000000000000000000001652 124.0
DYD1_k127_117689_3 Antibiotic biosynthesis monooxygenase - GO:0003674,GO:0003824 - 0.0000000000000000000000000008334 116.0
DYD1_k127_117689_4 Transcriptional regulator K07729 - - 0.0000000000000000000146 93.0
DYD1_k127_117689_5 histone H2A K63-linked ubiquitination - - - 0.0000007176 53.0
DYD1_k127_117689_6 HI0933-like protein K07007 - - 0.0001854 49.0
DYD1_k127_1177026_0 Catalyzes a salvage reaction resulting in the formation of AMP, that is energically less costly than de novo synthesis K00759 - 2.4.2.7 0.000000000000000000000000000000000000000000000000000000000000149 218.0
DYD1_k127_1177026_1 Uncharacterised protein family UPF0066 - - - 0.0000000000000000000000000000000000000000000000000000001651 198.0
DYD1_k127_1177026_2 Belongs to the MsrB Met sulfoxide reductase family K07305 - 1.8.4.12 0.000000000000000000000000000000000000002862 151.0
DYD1_k127_1177026_3 Belongs to the acylphosphatase family K01512 - 3.6.1.7 0.00000000004919 64.0
DYD1_k127_1179014_0 PFAM Cytochrome C assembly protein K02198 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000098 283.0
DYD1_k127_1179014_1 Heme chaperone required for the biogenesis of c-type cytochromes. Transiently binds heme delivered by CcmC and transfers the heme to apo-cytochromes in a process facilitated by CcmF and CcmH K02197 - - 0.0000000000000000000002181 101.0
DYD1_k127_1179014_2 Belongs to the anti-sigma-factor antagonist family K04749 - - 0.00000001641 62.0
DYD1_k127_1179014_3 Prolyl oligopeptidase K01322 - 3.4.21.26 0.000003138 50.0
DYD1_k127_1195070_0 Protein of unknown function (DUF1549) - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000036 285.0
DYD1_k127_1195070_1 PFAM Bacterial regulatory proteins, tetR family - - - 0.0000000000000000001398 94.0
DYD1_k127_1202862_0 Aldo/keto reductase family K05882 - 1.1.1.91 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000005993 299.0
DYD1_k127_1202862_1 PQQ-like domain - - - 0.000000000000000000000000000000000000001087 170.0
DYD1_k127_1202862_2 Belongs to the glycosyl hydrolase 13 family K07214 - - 0.00000000000001859 88.0
DYD1_k127_1204523_0 Radical SAM - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000002071 271.0
DYD1_k127_1204523_1 Isoprenylcysteine carboxyl methyltransferase (ICMT) family K16168 - - 0.000000000000000000000000000000001135 137.0
DYD1_k127_1204523_2 - catabolite gene activator and regulatory subunit of cAMP-dependent protein - - - 0.000000000003481 79.0
DYD1_k127_1204523_3 TLC ATP/ADP transporter K03301 - - 0.00000000003264 76.0
DYD1_k127_121339_0 AcrB/AcrD/AcrF family - - - 0.0 1210.0
DYD1_k127_121339_1 helix_turn_helix, Lux Regulon - - - 0.0000000000000000000000000000000000000000272 155.0
DYD1_k127_121339_2 Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family K03585 - - 0.00000000000000000000000000000005694 139.0
DYD1_k127_121339_3 Protein of unknown function (DUF2892) - - - 0.000000000000000008292 85.0
DYD1_k127_1219847_0 SPTR Glycosyl hydrolase, BNR repeat-containing protein - - - 1.762e-271 854.0
DYD1_k127_1219847_1 Catalyzes the condensation of isopentenyl diphosphate (IPP) with allylic pyrophosphates generating different type of terpenoids K00806 - 2.5.1.31 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000005617 300.0
DYD1_k127_1219847_2 Part of the twin-arginine translocation (Tat) system that transports large folded proteins containing a characteristic twin-arginine motif in their signal peptide across membranes K03118 GO:0003674,GO:0005215,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005886,GO:0006810,GO:0006886,GO:0008104,GO:0008150,GO:0008320,GO:0008565,GO:0009977,GO:0015031,GO:0015291,GO:0015399,GO:0015405,GO:0015450,GO:0015833,GO:0016020,GO:0022804,GO:0022857,GO:0022884,GO:0032991,GO:0033036,GO:0033281,GO:0034613,GO:0040007,GO:0042886,GO:0042887,GO:0043953,GO:0044424,GO:0044425,GO:0044444,GO:0044459,GO:0044464,GO:0045184,GO:0046907,GO:0051179,GO:0051234,GO:0051641,GO:0051649,GO:0055085,GO:0065002,GO:0070727,GO:0071702,GO:0071705,GO:0071806,GO:0071944,GO:0098796,GO:0098797,GO:1904680 - 0.0000000000000000000000000000000000000000000000000000000000000000186 232.0
DYD1_k127_1219847_3 Formation of pseudouridine at positions 38, 39 and 40 in the anticodon stem and loop of transfer RNAs K06173 GO:0001522,GO:0003674,GO:0003824,GO:0006139,GO:0006396,GO:0006399,GO:0006400,GO:0006725,GO:0006807,GO:0008033,GO:0008150,GO:0008152,GO:0009451,GO:0009982,GO:0009987,GO:0010467,GO:0016070,GO:0016853,GO:0016866,GO:0031119,GO:0034470,GO:0034641,GO:0034660,GO:0043170,GO:0043412,GO:0044237,GO:0044238,GO:0046483,GO:0071704,GO:0090304,GO:1901360 5.4.99.12 0.0000000000000000000000000000000000000000000000000000000001794 212.0
DYD1_k127_1219847_4 orotate phosphoribosyltransferase activity K00762 - 2.4.2.10 0.00000000000000000000000000000000000000000000000000001345 194.0
DYD1_k127_1219847_5 Belongs to the CDS family K00981 GO:0003674,GO:0003824,GO:0004605,GO:0005575,GO:0005618,GO:0005623,GO:0006139,GO:0006220,GO:0006221,GO:0006629,GO:0006644,GO:0006650,GO:0006655,GO:0006725,GO:0006753,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0008610,GO:0008654,GO:0009058,GO:0009117,GO:0009165,GO:0009987,GO:0016020,GO:0016024,GO:0016740,GO:0016772,GO:0016779,GO:0018130,GO:0019438,GO:0019637,GO:0030312,GO:0034641,GO:0034654,GO:0040007,GO:0044237,GO:0044238,GO:0044249,GO:0044255,GO:0044271,GO:0044281,GO:0044464,GO:0045017,GO:0046341,GO:0046471,GO:0046474,GO:0046483,GO:0046486,GO:0055086,GO:0070567,GO:0071704,GO:0071944,GO:0072527,GO:0072528,GO:0090407,GO:1901293,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576 2.7.7.41 0.000000000000000000000000000000000000000003296 165.0
DYD1_k127_1219847_6 Catalyzes the NADP-dependent rearrangement and reduction of 1-deoxy-D-xylulose-5-phosphate (DXP) to 2-C-methyl-D-erythritol 4-phosphate (MEP) K00099 - 1.1.1.267 0.0000000000000000006906 89.0
DYD1_k127_1219847_7 mttA/Hcf106 family K03116 - - 0.00000000000003782 73.0
DYD1_k127_1227438_0 COGs COG2204 Response regulator containing CheY-like receiver AAA-type ATPase and DNA-binding domains K13599 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003854 494.0
DYD1_k127_1227438_1 Peptidase MA superfamily - - - 0.0000000000000000000000000000000000002059 158.0
DYD1_k127_1227438_3 DnaJ molecular chaperone homology domain K09523 - - 0.000000005936 68.0
DYD1_k127_122981_0 COGs COG5001 signal transduction protein containing a membrane domain an EAL and a GGDEF domain - - - 3.008e-205 673.0
DYD1_k127_122981_1 PFAM peptidase S1 and S6 chymotrypsin Hap - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001205 386.0
DYD1_k127_122981_2 His Kinase A (phosphoacceptor) domain - - - 0.0000000000000000000000000000000000000000000001148 183.0
DYD1_k127_122981_3 - - - - 0.00000000000000000000000000000000000002893 154.0
DYD1_k127_1237889_0 PFAM Pyridine nucleotide-disulphide oxidoreductase K00384 - 1.8.1.9 2.24e-243 762.0
DYD1_k127_1237889_1 Cyclic nucleotide-monophosphate binding domain - - - 0.0000000000000000000000000000000000000001429 157.0
DYD1_k127_1237889_2 PFAM Transglycosylase-associated protein - - - 0.00000000000000000004723 91.0
DYD1_k127_1238321_0 Methylmalonyl-CoA mutase K01848 - 5.4.99.2 4.712e-213 679.0
DYD1_k127_1238321_1 MOFRL family K11529 - 2.7.1.165 0.00000000000000000000000000000000000000000000000000000000000000000003255 248.0
DYD1_k127_1238321_2 Belongs to the UPF0761 family K07058 - - 0.00000000000000000000000000000000001236 148.0
DYD1_k127_1238321_3 Belongs to the ABC transporter superfamily K02031 - - 0.00000000000000000000000000000002257 129.0
DYD1_k127_1238321_4 Dodecin K09165 - - 0.0000000000000001699 81.0
DYD1_k127_1239342_0 Belongs to the D-alanine--D-alanine ligase family K01921,K01955 - 6.3.2.4,6.3.5.5 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004643 363.0
DYD1_k127_1239342_1 HWE histidine kinase - - - 0.00000000000000000000000000000000001836 145.0
DYD1_k127_1239342_2 Serine threonine protein kinase K12132 - 2.7.11.1 0.0000000000000000000003563 113.0
DYD1_k127_1239342_3 PFAM ATP-binding region, ATPase domain protein - - - 0.00000000000009697 81.0
DYD1_k127_1247227_0 POT family K03305 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000395 466.0
DYD1_k127_1247227_1 Alpha/beta hydrolase family - - - 0.0000000000000000000000000000000000000000002841 169.0
DYD1_k127_1247227_2 Antibiotic biosynthesis monooxygenase - - - 0.000000000000000000000000000000339 125.0
DYD1_k127_1247227_3 SnoaL-like polyketide cyclase - - - 0.0000000000000000000000000004593 118.0
DYD1_k127_1251735_0 Major Facilitator Superfamily K18833 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000824 497.0
DYD1_k127_1251735_1 PFAM NAD-dependent epimerase dehydratase K01784 - 5.1.3.2 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008807 413.0
DYD1_k127_1251735_2 PFAM glycosyl transferase family 2 - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000009258 299.0
DYD1_k127_1251735_3 SPFH domain-Band 7 family - - - 0.0000000000003409 76.0
DYD1_k127_125262_0 Tetratricopeptide repeats K12132 - 2.7.11.1 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006615 446.0
DYD1_k127_125262_1 Nitrite and sulphite reductase 4Fe-4S - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000003336 300.0
DYD1_k127_125262_2 4Fe-4S dicluster domain - - - 0.0000000000000000000000000000000000000000000000000438 200.0
DYD1_k127_125262_3 COG1522 Transcriptional regulators - - - 0.0000000000000000000000000000000001259 137.0
DYD1_k127_125262_4 copper resistance - - - 0.00000000000000000000000000005805 121.0
DYD1_k127_1257387_0 A type II topoisomerase that negatively supercoils closed circular double-stranded (ds) DNA in an ATP-dependent manner to modulate DNA topology and maintain chromosomes in an underwound state. Negative supercoiling favors strand separation, and DNA replication, transcription, recombination and repair, all of which involve strand separation. Also able to catalyze the interconversion of other topological isomers of dsDNA rings, including catenanes and knotted rings. Type II topoisomerases break and join 2 DNA strands simultaneously in an ATP-dependent manner K02469 - 5.99.1.3 2.273e-272 860.0
DYD1_k127_1257387_1 A type II topoisomerase that negatively supercoils closed circular double-stranded (ds) DNA in an ATP-dependent manner to modulate DNA topology and maintain chromosomes in an underwound state. Negative supercoiling favors strand separation, and DNA replication, transcription, recombination and repair, all of which involve strand separation. Also able to catalyze the interconversion of other topological isomers of dsDNA rings, including catenanes and knotted rings. Type II topoisomerases break and join 2 DNA strands simultaneously in an ATP-dependent manner K02470 - 5.99.1.3 0.0000000000000000000000000000000004624 134.0
DYD1_k127_1257387_2 von Willebrand factor, type A K07114,K12511 - - 0.00001554 57.0
DYD1_k127_1259125_0 Dioxygenase - - - 0.00000000000000000000000000000000000000000000000000000000000001509 220.0
DYD1_k127_1259125_1 COG0204 1-acyl-sn-glycerol-3-phosphate acyltransferase - - - 0.00000000000000000000000000000000000000000000000000000000001451 213.0
DYD1_k127_1259125_2 peptide-methionine (S)-S-oxide reductase activity K07304 - 1.8.4.11 0.0000000000000000000000000000000000000000000000002192 177.0
DYD1_k127_1261760_0 PAS fold - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004748 320.0
DYD1_k127_1261760_1 RNA recognition motif - - - 0.000000000000000000000001245 107.0
DYD1_k127_126484_0 converts alpha-aldose to the beta-anomer - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000001003 290.0
DYD1_k127_126484_1 Catalyzes the conversion of cyclic dehypoxanthine futalosine (cyclic DHFL) into 1,4-dihydroxy-6-naphthoate, a step in the biosynthesis of menaquinone (MK, vitamin K2) K11785 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000003705 254.0
DYD1_k127_126484_2 arylsulfatase A - - - 0.00000000000000000000000000000000000005158 151.0
DYD1_k127_1275783_0 cell shape determining protein MreB K03569 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000114 520.0
DYD1_k127_1275783_1 Belongs to the peptidase S41A family K03797 - 3.4.21.102 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000083 444.0
DYD1_k127_1275783_2 ABC-type multidrug transport system ATPase component K01990 - - 0.0000000000000000000000000000000000000000000002126 173.0
DYD1_k127_1275783_3 - - - - 0.0000002499 53.0
DYD1_k127_1275783_4 PFAM FecR protein - - - 0.00005729 55.0
DYD1_k127_1302096_0 NAD-dependent glycerol-3-phosphate dehydrogenase domain protein K00057 - 1.1.1.94 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001491 317.0
DYD1_k127_1302096_1 proline dipeptidase activity K01262 - 3.4.11.9 0.0000000000000000000000000000000000000000000000000000000000000000000000000003809 262.0
DYD1_k127_1302096_2 Catalyzes the transfer of an acyl group from acyl- phosphate (acyl-PO(4)) to glycerol-3-phosphate (G3P) to form lysophosphatidic acid (LPA). This enzyme utilizes acyl-phosphate as fatty acyl donor, but not acyl-CoA or acyl-ACP K08591 - 2.3.1.15 0.0000000000000000000000724 102.0
DYD1_k127_1310327_0 Catalyzes the attachment of alanine to tRNA(Ala) in a two-step reaction alanine is first activated by ATP to form Ala- AMP and then transferred to the acceptor end of tRNA(Ala). Also edits incorrectly charged Ser-tRNA(Ala) and Gly-tRNA(Ala) via its editing domain K01872 - 6.1.1.7 2.144e-254 805.0
DYD1_k127_1310327_1 Modulates RecA activity K03565 - - 0.00000000001349 72.0
DYD1_k127_1313416_0 ATP-grasp domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000362 535.0
DYD1_k127_1313416_1 alpha/beta hydrolase fold K01563 - 3.8.1.5 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000001572 302.0
DYD1_k127_1313416_2 PFAM helix-turn-helix- domain containing protein AraC type - - - 0.000000000000000000000000000000000000000000000000125 187.0
DYD1_k127_1313416_3 Alpha/beta hydrolase family - - - 0.00000000000000000000000000004384 133.0
DYD1_k127_1313416_4 Protein of unknown function (DUF1326) - - - 0.000000000001379 77.0
DYD1_k127_1314535_0 hydrolase activity, acting on ester bonds - - - 0.000000000000000000000000000000000000000000000000000000000000000000000005675 252.0
DYD1_k127_1314535_1 Evidence 3 Function proposed based on presence of conserved amino acid motif, structural feature or limited homology K05996,K07752 - 3.4.17.18,3.4.17.22 0.000000000000000000000000000000000000000000000000000000000000000002016 236.0
DYD1_k127_1314535_2 The 2-oxoglutarate dehydrogenase complex catalyzes the overall conversion of 2-oxoglutarate to succinyl-CoA and CO(2) K00658 - 2.3.1.61 0.000000000000000000000000000000000000001885 147.0
DYD1_k127_1321348_0 Involved in the biosynthesis of isopentenyl diphosphate (IPP) and dimethylallyl diphosphate (DMAPP), two major building blocks of isoprenoid compounds. Catalyzes the conversion of 4- diphosphocytidyl-2-C-methyl-D-erythritol 2-phosphate (CDP-ME2P) to 2-C-methyl-D-erythritol 2,4-cyclodiphosphate (ME-CPP) with a corresponding release of cytidine 5-monophosphate (CMP) K01770 - 4.6.1.12 0.00000000000000000000000000000000000000000000000000000872 193.0
DYD1_k127_1321348_1 Belongs to the class IV-like SAM-binding methyltransferase superfamily. RNA methyltransferase TrmH family K03218 GO:0000154,GO:0000451,GO:0000453,GO:0001510,GO:0003674,GO:0003824,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006139,GO:0006364,GO:0006396,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0008168,GO:0008171,GO:0008173,GO:0008649,GO:0008757,GO:0009451,GO:0009987,GO:0010467,GO:0016070,GO:0016072,GO:0016435,GO:0016740,GO:0016741,GO:0022613,GO:0031167,GO:0032259,GO:0034470,GO:0034641,GO:0034660,GO:0042254,GO:0043170,GO:0043412,GO:0043414,GO:0044085,GO:0044237,GO:0044238,GO:0044260,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0070039,GO:0071704,GO:0071840,GO:0090304,GO:0140098,GO:0140102,GO:1901360 2.1.1.185 0.00000000000000000000000000000000000000000000000000002461 199.0
DYD1_k127_1321348_2 Catalyzes the formation of 4-diphosphocytidyl-2-C- methyl-D-erythritol from CTP and 2-C-methyl-D-erythritol 4- phosphate (MEP) K00991 - 2.7.7.60 0.0000000000000000001218 92.0
DYD1_k127_1322601_0 transferase activity, transferring glycosyl groups K13693 - 2.4.1.266 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001199 478.0
DYD1_k127_1322601_1 PFAM Glycosyl transferase family 2 K21349 - 2.4.1.268 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001407 480.0
DYD1_k127_1322601_2 Catalyzes the condensation of 2 ATP molecules into cyclic di-AMP (c-di-AMP), a second messenger used to regulate differing processes in different bacteria - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000001666 276.0
DYD1_k127_1322601_3 haloacid dehalogenase-like hydrolase K05947,K07026 GO:0000287,GO:0003674,GO:0003824,GO:0005488,GO:0006793,GO:0006796,GO:0008150,GO:0008152,GO:0009987,GO:0016311,GO:0016787,GO:0016788,GO:0016791,GO:0042578,GO:0043167,GO:0043169,GO:0044237,GO:0046872,GO:0046914,GO:0050897 2.4.1.217,3.1.3.70 0.0000000000000000000000000000000000000000000000000000000000355 215.0
DYD1_k127_1322601_4 Part of the ABC transporter complex UgpABCE involved in sn-glycerol-3-phosphate import. Responsible for energy coupling to the transport system K10112 - - 0.0000000000000000000000000000000000000000000000000000000003897 210.0
DYD1_k127_1322601_5 - - - - 0.000000000000000000000005791 112.0
DYD1_k127_1322601_6 DHH family - - - 0.00000000000000000000004477 107.0
DYD1_k127_134680_0 Iron-sulfur cluster-binding domain - - - 0.0000000000000000000000000000000000000000000000000007339 188.0
DYD1_k127_134680_1 deoxyhypusine monooxygenase activity K05385 - - 0.00000000006359 72.0
DYD1_k127_1365745_0 Amidohydrolase family - - - 4.742e-227 711.0
DYD1_k127_1365745_1 PFAM response regulator receiver K02477 - - 0.000000000000000000000001419 109.0
DYD1_k127_1365745_2 RNA polymerase sigma factor K03088 - - 0.00000000000000003237 89.0
DYD1_k127_1371038_0 serine threonine protein kinase K12132 - 2.7.11.1 0.000000000000000000000000000000000000000000000000000000000000000000000000000002844 301.0
DYD1_k127_1371038_1 Tetratricopeptide repeats K12132 - 2.7.11.1 0.00000000000000000000000000000000000000000000000000001997 218.0
DYD1_k127_1385233_0 Sodium Bile acid symporter family K03325 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004248 457.0
DYD1_k127_1385233_1 low molecular weight phosphotyrosine protein phosphatase K03741 - 1.20.4.1 0.00000000000000000000000000000000000008069 147.0
DYD1_k127_1385233_2 helix_turn_helix, Arsenical Resistance Operon Repressor - - - 0.000000000000001229 81.0
DYD1_k127_1385642_0 Protein kinase domain K08884 - 2.7.11.1 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009168 368.0
DYD1_k127_1396203_0 Transport of potassium into the cell K03549 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001358 507.0
DYD1_k127_1396203_1 Rhodanese Homology Domain - - - 0.0000000000000000000000000000000054 133.0
DYD1_k127_1410804_0 Beta-eliminating lyase K01667 - 4.1.99.1 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007048 418.0
DYD1_k127_1410804_1 Toxic component of a toxin-antitoxin (TA) module. An RNase K07065 - - 0.0000000000000003712 83.0
DYD1_k127_1410804_2 Protein kinase domain - - - 0.00006664 48.0
DYD1_k127_141249_0 Heat shock 70 kDa protein K04043 - - 1.901e-306 949.0
DYD1_k127_141249_1 ATP binding to DnaK triggers the release of the substrate protein, thus completing the reaction cycle. Several rounds of ATP-dependent interactions between DnaJ, DnaK and GrpE are required for fully efficient folding. Also involved, together with DnaK and GrpE, in the DNA replication of plasmids through activation of initiation proteins K03686 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001079 351.0
DYD1_k127_141249_2 Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released. This sigma factor is the primary sigma factor during exponential growth K03086 - - 0.000000000000000000000000000000000000000000000000000000000000000001211 237.0
DYD1_k127_141249_3 helix_turn_helix, mercury resistance K13640 - - 0.000000000000000000000000000000000000004531 150.0
DYD1_k127_141249_4 PFAM GGDEF domain containing protein - - - 0.00000000000000000000005518 103.0
DYD1_k127_1413366_0 Amidohydrolase family - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001102 498.0
DYD1_k127_1413366_1 ATPase (AAA superfamily K07133 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000302 330.0
DYD1_k127_1413366_2 Protein tyrosine kinase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000001278 259.0
DYD1_k127_1413366_3 - - - - 0.00000000001849 66.0
DYD1_k127_1427270_0 Belongs to the peptidase S41A family - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000009835 287.0
DYD1_k127_1427270_1 Beta-lactamase - - - 0.0000000000000000000000000000000000000000000000000000000002227 216.0
DYD1_k127_1427270_2 Protein tyrosine kinase - - - 0.0000000000000000000000000000001359 127.0
DYD1_k127_1430336_0 Ribosomal protein S1 K02945,K03527,K07571 - 1.17.7.4 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001074 424.0
DYD1_k127_1430336_1 arylsulfatase activity - - - 0.00000000000000000000000000000000008355 153.0
DYD1_k127_1456294_0 Belongs to the ompA family - - - 0.00000000000000000000000000000000000000000003224 168.0
DYD1_k127_1456294_1 WD40-like Beta Propeller Repeat - - - 0.00000000000000000000000000000005742 136.0
DYD1_k127_1456294_2 von Willebrand factor, type A K07114 - - 0.00000000000000000000000008854 118.0
DYD1_k127_1460588_0 Type II/IV secretion system protein K02669 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002075 315.0
DYD1_k127_1460588_1 Histidine kinase - - - 0.000000000000000000000000000000000000000000000000000000000004603 226.0
DYD1_k127_1460588_2 zinc-ribbon domain - - - 0.00000000001739 74.0
DYD1_k127_1468623_0 DNA-dependent ATPase involved in processing of recombination intermediates, plays a role in repairing DNA breaks. Stimulates the branch migration of RecA-mediated strand transfer reactions, allowing the 3' invading strand to extend heteroduplex DNA faster. Binds ssDNA in the presence of ADP but not other nucleotides, has ATPase activity that is stimulated by ssDNA and various branched DNA structures, but inhibited by SSB. Does not have RecA's homology-searching function K04485 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004285 410.0
DYD1_k127_1468623_1 Catalyzes the interconversion of L-alanine and D- alanine. May also act on other amino acids K01775 - 5.1.1.1 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000009385 291.0
DYD1_k127_1476765_0 Aldo/keto reductase family - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001939 333.0
DYD1_k127_1476765_1 protein kinase activity - - - 0.000000000000000000000000000000000000000000000000004375 196.0
DYD1_k127_1476765_2 Belongs to the short-chain dehydrogenases reductases (SDR) family K07124 - - 0.00000000000000000000000000000002608 133.0
DYD1_k127_1482692_0 Alternative locus ID K01436 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004417 397.0
DYD1_k127_1482692_1 PFAM 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain K00074 - 1.1.1.157 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002006 369.0
DYD1_k127_1482692_2 Proline dehydrogenase K00318 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000001678 301.0
DYD1_k127_1482692_3 Enoyl-CoA hydratase/isomerase K01715 - 4.2.1.17 0.00000000000000000000000000000000000000000000000000000000000000000000000572 251.0
DYD1_k127_1482692_4 Uncharacterized conserved protein (DUF2203) - - - 0.00000000000000000000005694 104.0
DYD1_k127_1483265_0 Tetratricopeptide repeat K12132 - 2.7.11.1 6.13e-322 1035.0
DYD1_k127_1483265_1 AI-2E family transporter - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007306 412.0
DYD1_k127_1483265_2 protein kinase activity - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000001777 327.0
DYD1_k127_1483265_3 Protein of unknown function (DUF4242) - - - 0.0000000000000000000000000000000004442 132.0
DYD1_k127_1483265_4 Protein of unknown function (DUF3309) - - - 0.00000000000000001429 83.0
DYD1_k127_1498545_0 Cytochrome c554 and c-prime - - - 2.053e-296 926.0
DYD1_k127_1498545_1 ASPIC and UnbV - - - 2.89e-198 632.0
DYD1_k127_1514416_0 Binds and transfers iron-sulfur (Fe-S) clusters to target apoproteins. Can hydrolyze ATP K03593 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006045 372.0
DYD1_k127_1514416_1 Protein of unknown function (DUF971) - - - 0.00000000000000000000000006644 112.0
DYD1_k127_1514735_0 IMS family HHH motif K02346 - 2.7.7.7 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000008629 301.0
DYD1_k127_1514735_1 Represses a number of genes involved in the response to DNA damage (SOS response), including recA and lexA. In the presence of single-stranded DNA, RecA interacts with LexA causing an autocatalytic cleavage which disrupts the DNA-binding part of LexA, leading to derepression of the SOS regulon and eventually DNA repair K01356 - 3.4.21.88 0.00000000000000000000000000000000000000000000000000000000000002417 220.0
DYD1_k127_1527687_0 Belongs to the MlaE permease family K02066 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000001751 267.0
DYD1_k127_1527687_1 MacB-like periplasmic core domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000005566 246.0
DYD1_k127_1527687_2 ABC transporter K02065 - - 0.0000000000000000000000000000000000000000000000000000000000000000002943 238.0
DYD1_k127_1527687_3 MlaD protein K02067 - - 0.0000000000000000000000000000000000000000000000000000009687 205.0
DYD1_k127_1527687_4 Participates in transcription elongation, termination and antitermination K02601,K05785 GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006355,GO:0008150,GO:0009889,GO:0010468,GO:0010556,GO:0019219,GO:0019222,GO:0031323,GO:0031326,GO:0044424,GO:0044444,GO:0044464,GO:0050789,GO:0050794,GO:0051171,GO:0051252,GO:0060255,GO:0065007,GO:0080090,GO:1903506,GO:2000112,GO:2001141 - 0.00000000000000000000000000000000000000000427 160.0
DYD1_k127_1527687_5 Haloacid dehalogenase-like hydrolase K07025 - - 0.0000000000000000000000000000000001429 137.0
DYD1_k127_1544465_0 protein kinase activity K12132 - 2.7.11.1 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006604 332.0
DYD1_k127_1545282_0 PFAM nucleoside H symporter K05820 - - 0.0000000000000000000000000000000000000000000000000000001215 209.0
DYD1_k127_1545282_1 NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient - - - 0.0000000000000000000000003836 108.0
DYD1_k127_1545282_2 oxidoreductase activity - - - 0.0007338 47.0
DYD1_k127_1549584_0 cellulose binding - - - 0.0 1194.0
DYD1_k127_1549584_1 Pyridoxal-phosphate dependent enzyme K01738 - 2.5.1.47 0.0000000000000017 76.0
DYD1_k127_1550787_0 TLC ATP/ADP transporter K03301 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000001612 310.0
DYD1_k127_1550787_1 Biopolymer transport protein K03560 - - 0.0000000000000001807 85.0
DYD1_k127_1550787_2 Thioredoxin-like domain - - - 0.000000000001157 74.0
DYD1_k127_155224_0 Peptidase dimerisation domain K01295 - 3.4.17.11 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000009099 306.0
DYD1_k127_155224_1 Domain of unknown function (DUF5117) - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000099 295.0
DYD1_k127_155224_2 Memo-like protein K06990 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000002281 272.0
DYD1_k127_155224_3 Involved in unsaturated fatty acids biosynthesis. Catalyzes the dehydration of short chain beta-hydroxyacyl-ACPs and long chain saturated and unsaturated beta-hydroxyacyl-ACPs K02372 - 4.2.1.59 0.00000000000000000000000000000000001151 144.0
DYD1_k127_155224_4 Catalyzes the gamma-elimination of phosphate from L- phosphohomoserine and the beta-addition of water to produce L- threonine K01733 - 4.2.3.1 0.0000000000000000000000000001726 117.0
DYD1_k127_1564181_0 Enoyl-CoA hydratase/isomerase K15513 - 4.1.2.44 2.524e-214 676.0
DYD1_k127_1564181_1 benzoyl-CoA oxygenase K15512 - 1.14.13.208 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003097 428.0
DYD1_k127_1568965_0 TIGRFAM FeS assembly protein SufB K09014 - - 2.887e-250 779.0
DYD1_k127_1568965_1 ATPase activity K09013 GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006790,GO:0008150,GO:0008152,GO:0009314,GO:0009628,GO:0009987,GO:0016043,GO:0016226,GO:0022607,GO:0031163,GO:0044085,GO:0044237,GO:0044424,GO:0044444,GO:0044464,GO:0050896,GO:0051186,GO:0071840 - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001063 363.0
DYD1_k127_1568965_2 Uncharacterized protein family (UPF0051) K09015 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002338 347.0
DYD1_k127_1568965_3 Aminotransferase class-V K11717 - 2.8.1.7,4.4.1.16 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000006392 297.0
DYD1_k127_1568965_4 Catalyzes the removal of elemental sulfur and selenium atoms from L-cysteine, L-cystine, L-selenocysteine, and L- selenocystine to produce L-alanine K11717 - 2.8.1.7,4.4.1.16 0.000000000000000000000000000000000000000000000000002547 184.0
DYD1_k127_1587093_0 efflux transmembrane transporter activity - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002509 458.0
DYD1_k127_1587093_1 Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family K07798,K15727 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001284 347.0
DYD1_k127_1587093_2 Outer membrane efflux protein - - - 0.000000000000000000000000000000000000000000000000000000000008974 223.0
DYD1_k127_1587093_3 Helix-turn-helix - - - 0.000000001171 64.0
DYD1_k127_1594245_0 Glycosyl hydrolase family 57 - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000679 545.0
DYD1_k127_1594245_1 protein kinase activity - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002081 337.0
DYD1_k127_1594245_2 PFAM permease YjgP YjgQ family protein K07091 - - 0.0000000000000000000000000000000000000000000000000000000000001223 228.0
DYD1_k127_1603147_0 signal transduction protein containing a membrane domain an EAL and a GGDEF domain - - - 2.501e-202 645.0
DYD1_k127_1603147_1 Protein of unknown function (DUF541) K09807 - - 0.000000000000000000000000000000000000002682 155.0
DYD1_k127_1603147_2 diguanylate cyclase - - - 0.0000000000000000000000000000000000003582 154.0
DYD1_k127_1615475_0 Belongs to the bacterial ribosomal protein bL28 family K02902 GO:0003674,GO:0003735,GO:0005198 - 0.000000000000000000831 90.0
DYD1_k127_1615475_1 Lysin motif K19223 - - 0.00000001175 67.0
DYD1_k127_1635108_0 His Kinase A (phosphoacceptor) domain - - - 0.000000000000000000000000000000000000000000000000007111 200.0
DYD1_k127_1635108_1 Transcriptional regulatory protein, C terminal - - - 0.0000000000000000000000000000000000000000004203 162.0
DYD1_k127_1635108_2 Integrase core domain - - - 0.0000000000008461 70.0
DYD1_k127_1640758_0 Tetratricopeptide repeats K12132 - 2.7.11.1 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002562 612.0
DYD1_k127_1640758_1 MacB-like periplasmic core domain - - - 0.00000000000000000000000000000000000000000000000002154 184.0
DYD1_k127_1640758_2 Heme NO binding - - - 0.000000001697 61.0
DYD1_k127_1652838_0 COG0635 Coproporphyrinogen III oxidase and related Fe-S - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005249 372.0
DYD1_k127_1652838_1 PQQ-like domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003076 333.0
DYD1_k127_1652838_2 Dienelactone hydrolase family - - - 0.0000000000000000005111 93.0
DYD1_k127_1686285_0 Is required not only for elongation of protein synthesis but also for the initiation of all mRNA translation through initiator tRNA(fMet) aminoacylation K01874 - 6.1.1.10 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004454 386.0
DYD1_k127_1686285_1 ThiF family - - - 0.00000000000000000000006982 110.0
DYD1_k127_1686285_2 - - - - 0.000000001534 67.0
DYD1_k127_1692023_0 transporter (permease K02004 - - 0.00000000000000000000000000000000000000000000000000000000000000000000007416 255.0
DYD1_k127_1692023_1 PFAM Iron permease FTR1 - - - 0.0000000000000000000000000000000000000000000000000000001139 204.0
DYD1_k127_1692023_2 efflux transmembrane transporter activity K02004 - - 0.00000000000000008496 88.0
DYD1_k127_1724236_0 Protein tyrosine kinase - - - 0.0000000000000000000000000000000000000000000000003651 196.0
DYD1_k127_1724236_1 Large extracellular alpha-helical protein - - - 0.000000859 55.0
DYD1_k127_1727712_0 ATPase (AAA superfamily - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002882 414.0
DYD1_k127_1727712_1 cAMP biosynthetic process K08282,K12132 - 2.7.11.1 0.000000000000000000000000000000000000000000000000000000000000000000001029 260.0
DYD1_k127_1727712_2 Putative restriction endonuclease - - - 0.0000000000000000000000000000000000000000000000000167 187.0
DYD1_k127_1727712_3 protein histidine kinase activity K07315 - 3.1.3.3 0.000000000000000000000000000000000000000005257 173.0
DYD1_k127_1727712_4 phosphorelay signal transduction system - - - 0.000000000000000000000000000000001873 149.0
DYD1_k127_1727712_5 Carboxylesterase family - - - 0.0000000000003999 71.0
DYD1_k127_1727712_6 oligosaccharyl transferase activity - - - 0.000002726 56.0
DYD1_k127_1734388_0 Belongs to the peptidase S8 family - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001834 503.0
DYD1_k127_1734388_1 spectrin binding - - - 0.00000000000000000000000000000004263 139.0
DYD1_k127_1734388_2 Belongs to the peptidase S8 family - - - 0.000000000000000000000682 96.0
DYD1_k127_1736249_0 Tetratricopeptide repeat - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000196 378.0
DYD1_k127_174121_0 Peptidase dimerisation domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006374 554.0
DYD1_k127_174121_1 HNH endonuclease K07454 - - 0.0000000000000000000000000000000000000000000000000000000000000000246 238.0
DYD1_k127_174121_2 - - - - 0.0000000000000000000000000000000000000000000007585 170.0
DYD1_k127_174121_3 Protein of unknown function (DUF5131) - - - 0.0000000000000000000000000000000005214 132.0
DYD1_k127_174121_4 TIGRFAM YgiT-type zinc finger domain - - - 0.000000000000000000000000008291 110.0
DYD1_k127_174121_5 Dodecin - - - 0.000000000000000005425 85.0
DYD1_k127_174121_6 Nucleotidyl transferase AbiEii toxin, Type IV TA system - - - 0.000000003542 58.0
DYD1_k127_174380_0 ATP-dependent CLP protease ATP-binding subunit K03694 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000235 443.0
DYD1_k127_1747336_0 cystathionine gamma-synthase activity K01739,K01758,K01760,K01761 GO:0000096,GO:0000097,GO:0003674,GO:0003824,GO:0003962,GO:0004121,GO:0004123,GO:0006082,GO:0006520,GO:0006555,GO:0006790,GO:0006807,GO:0008150,GO:0008152,GO:0008652,GO:0009058,GO:0009066,GO:0009067,GO:0009086,GO:0009987,GO:0016053,GO:0016740,GO:0016765,GO:0016829,GO:0016846,GO:0019752,GO:0043436,GO:0044237,GO:0044238,GO:0044249,GO:0044272,GO:0044281,GO:0044283,GO:0046394,GO:0071704,GO:1901564,GO:1901566,GO:1901576,GO:1901605,GO:1901607 2.5.1.48,4.4.1.1,4.4.1.11,4.4.1.8 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008114 483.0
DYD1_k127_1747336_1 Peptidase family S58 - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001136 474.0
DYD1_k127_1747336_2 lactate metabolic process K00113 GO:0003674,GO:0005488,GO:0005575,GO:0005623,GO:0005886,GO:0006091,GO:0008150,GO:0008152,GO:0009061,GO:0009987,GO:0015980,GO:0016020,GO:0022900,GO:0043167,GO:0043169,GO:0044237,GO:0044464,GO:0045333,GO:0046872,GO:0048037,GO:0051536,GO:0051540,GO:0055114,GO:0071944 1.1.5.3 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002723 373.0
DYD1_k127_1747336_3 Rubrerythrin - - - 0.000000000000000000000000000000000000000000000000000000000000000000001423 237.0
DYD1_k127_1747336_4 Protein of unknown function (DUF3501) - - - 0.00000000000000000000000000000004413 134.0
DYD1_k127_1752248_0 Sterol desaturase - - - 0.0000000000000000000000000000000000000000000000000000000000000001443 231.0
DYD1_k127_1752248_1 PemK-like, MazF-like toxin of type II toxin-antitoxin system K07171 - - 0.00000000000000000000000000000000000000009053 153.0
DYD1_k127_1752248_2 - - - - 0.0000000000000000003432 89.0
DYD1_k127_1752248_3 Transglycosylase associated protein - - - 0.000000000002328 72.0
DYD1_k127_1752248_4 Pfam SNARE associated Golgi protein - - - 0.000000000068 71.0
DYD1_k127_1752248_5 dimethylhistidine N-methyltransferase activity K18911 - 2.1.1.44 0.00001587 49.0
DYD1_k127_1756991_0 PFAM membrane-flanked domain - - - 0.00000000000000000000000000000000001504 143.0
DYD1_k127_1756991_1 PFAM Ankyrin repeat K06867 - - 0.000000000000000000000000007117 119.0
DYD1_k127_1756991_2 Secretin and TonB N terminus short domain K02666 - - 0.0000000000000000002729 94.0
DYD1_k127_1756991_3 Protein of unknown function (DUF507) K09804 - - 0.00000000000006507 74.0
DYD1_k127_1756991_4 Protein of unknown function (DUF507) K09804 - - 0.000000000002088 70.0
DYD1_k127_1756991_5 spectrin binding - - - 0.000000004213 67.0
DYD1_k127_1756991_6 PFAM von Willebrand factor type A - - - 0.0007766 51.0
DYD1_k127_1758877_0 Belongs to the GARS family K01945,K01952,K13713 - 6.3.2.6,6.3.4.13,6.3.5.3 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006123 451.0
DYD1_k127_1758877_1 Catalyzes the conversion of N5-carboxyaminoimidazole ribonucleotide (N5-CAIR) to 4-carboxy-5-aminoimidazole ribonucleotide (CAIR) K01588 - 5.4.99.18 0.00000000000000000000000000000000000000000000004076 174.0
DYD1_k127_1758877_2 Uncharacterized protein family UPF0004 K18707 - 2.8.4.5 0.0000000000000000000000000000000001939 138.0
DYD1_k127_1763349_0 serine threonine protein kinase K12132 - 2.7.11.1 0.000000000000000000000000000000000000000000000000000000000000000000000000000007573 295.0
DYD1_k127_1766613_0 Belongs to the amidase family - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000278 410.0
DYD1_k127_1766613_1 bacterial OsmY and nodulation domain K04065 - - 0.0000000005937 68.0
DYD1_k127_1768018_0 Protein of unknown function DUF58 - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000001356 280.0
DYD1_k127_1768018_1 Protein of unknown function (DUF3052) - - - 0.0000000000000000000000000000003526 130.0
DYD1_k127_1768018_2 cell adhesion involved in biofilm formation K01186 - 3.2.1.18 0.0000000000000000001683 103.0
DYD1_k127_1768018_3 Bacterial transferase hexapeptide (six repeats) - - - 0.000000000009055 66.0
DYD1_k127_1783082_0 lyase activity K11645 GO:0003674,GO:0003824,GO:0004332,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0016829,GO:0016830,GO:0016832,GO:0042802,GO:0044424,GO:0044444,GO:0044464 4.1.2.13 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004281 571.0
DYD1_k127_1783082_1 benzoyl-CoA oxygenase K15512 - 1.14.13.208 0.00000000000000000000000000000000000000000000000000000000000000000000000000002522 263.0
DYD1_k127_1789056_0 Isocitrate dehydrogenase K00031 - 1.1.1.42 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002646 538.0
DYD1_k127_1789056_1 Catalyzes the reversible oxidation of malate to oxaloacetate K00024 - 1.1.1.37 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002071 431.0
DYD1_k127_1789056_2 Succinyl-CoA synthetase functions in the citric acid cycle (TCA), coupling the hydrolysis of succinyl-CoA to the synthesis of either ATP or GTP and thus represents the only step of substrate-level phosphorylation in the TCA. The beta subunit provides nucleotide specificity of the enzyme and binds the substrate succinate, while the binding sites for coenzyme A and phosphate are found in the alpha subunit K01903 - 6.2.1.5 0.00000000000000000000000000000000000000000000000001755 184.0
DYD1_k127_1789056_3 Belongs to the bacterial ribosomal protein bS21 family K02970 - - 0.000000000000000000005169 93.0
DYD1_k127_1793531_0 electron transfer flavoprotein-ubiquinone oxidoreductase K00311 - 1.5.5.1 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001477 587.0
DYD1_k127_1793531_1 PFAM glycosyl transferase group 1 - - - 0.00000001269 67.0
DYD1_k127_1793769_0 TIGRFAM carbamoyl-phosphate synthase, large subunit K01955 - 6.3.5.5 0.000000000000000000000000000000000000000000000000000000006925 203.0
DYD1_k127_1793769_1 Catalyzes the deamination of adenosine to inosine at the wobble position 34 of tRNA(Arg2) K11991 GO:0002097,GO:0002100,GO:0006139,GO:0006382,GO:0006396,GO:0006399,GO:0006400,GO:0006725,GO:0006807,GO:0008033,GO:0008150,GO:0008152,GO:0009451,GO:0009987,GO:0010467,GO:0016070,GO:0016553,GO:0034470,GO:0034641,GO:0034660,GO:0043170,GO:0043412,GO:0044237,GO:0044238,GO:0046483,GO:0071704,GO:0090304,GO:1901360 3.5.4.33 0.0000000000000000000000000000000000000001827 158.0
DYD1_k127_1793769_2 Sodium/hydrogen exchanger family K03455 - - 0.000000000000000000000000000000000000009111 151.0
DYD1_k127_1793769_3 Channel that opens in response to stretch forces in the membrane lipid bilayer. May participate in the regulation of osmotic pressure changes within the cell K03282 GO:0003674,GO:0005215,GO:0005488,GO:0005515,GO:0005575,GO:0005623,GO:0005886,GO:0005887,GO:0006810,GO:0006811,GO:0006884,GO:0008150,GO:0008361,GO:0008381,GO:0009987,GO:0009992,GO:0015267,GO:0016020,GO:0016021,GO:0016043,GO:0019725,GO:0022803,GO:0022836,GO:0022857,GO:0030104,GO:0031224,GO:0031226,GO:0032535,GO:0042592,GO:0042802,GO:0044425,GO:0044459,GO:0044464,GO:0048878,GO:0051179,GO:0051234,GO:0055082,GO:0055085,GO:0065007,GO:0065008,GO:0071840,GO:0071944,GO:0090066 - 0.000009161 49.0
DYD1_k127_1794290_0 esterase - - - 2.673e-266 828.0
DYD1_k127_1801523_0 Diguanylate cyclase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001026 525.0
DYD1_k127_1801523_1 Catalyzes the attachment of proline to tRNA(Pro) in a two-step reaction proline is first activated by ATP to form Pro- AMP and then transferred to the acceptor end of tRNA(Pro). As ProRS can inadvertently accommodate and process non-cognate amino acids such as alanine and cysteine, to avoid such errors it has two additional distinct editing activities against alanine. One activity is designated as 'pretransfer' editing and involves the tRNA(Pro)-independent hydrolysis of activated Ala-AMP. The other activity is designated 'posttransfer' editing and involves deacylation of mischarged Ala-tRNA(Pro). The misacylated Cys- tRNA(Pro) is not edited by ProRS K01881 - 6.1.1.15 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000102 451.0
DYD1_k127_1801523_2 Calcineurin-like phosphoesterase - - - 0.00000000000000000000000000000000000000007419 161.0
DYD1_k127_1801523_3 Uncharacterized conserved protein (DUF2277) - - - 0.00000000000001116 76.0
DYD1_k127_1805100_0 chorismate binding enzyme K03342 - 2.6.1.85,4.1.3.38 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001854 426.0
DYD1_k127_1808135_0 Magnesium chelatase, subunit ChlI C-terminal K07391 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009096 517.0
DYD1_k127_1808135_1 Enoyl-(Acyl carrier protein) reductase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000007911 282.0
DYD1_k127_1808135_2 PD-(D/E)XK nuclease superfamily - - - 0.0000000000000000000000000000000000000000009351 164.0
DYD1_k127_1808135_3 Involved in the biosynthesis of lipopolysaccharides (LPSs). Catalyzes the hydrolysis of 3-deoxy-D-manno-octulosonate 8-phosphate (KDO 8-P) to 3-deoxy-D-manno-octulosonate (KDO) and inorganic phosphate K03270 GO:0000271,GO:0003674,GO:0003824,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005975,GO:0005976,GO:0006629,GO:0006793,GO:0006796,GO:0008150,GO:0008152,GO:0008610,GO:0008653,GO:0008781,GO:0009058,GO:0009059,GO:0009103,GO:0009987,GO:0016051,GO:0016311,GO:0016740,GO:0016772,GO:0016779,GO:0016787,GO:0016788,GO:0016791,GO:0019143,GO:0033692,GO:0034637,GO:0034645,GO:0042578,GO:0043170,GO:0044237,GO:0044238,GO:0044249,GO:0044255,GO:0044260,GO:0044262,GO:0044264,GO:0044424,GO:0044444,GO:0044464,GO:0070567,GO:0071704,GO:1901135,GO:1901137,GO:1901576,GO:1903509 3.1.3.45 0.0000000000000000000009772 97.0
DYD1_k127_1814034_0 protein kinase activity K07180 GO:0003674,GO:0003824,GO:0004672,GO:0006464,GO:0006468,GO:0006793,GO:0006796,GO:0006807,GO:0006950,GO:0006995,GO:0007154,GO:0008150,GO:0008152,GO:0009267,GO:0009605,GO:0009987,GO:0009991,GO:0016301,GO:0016310,GO:0016740,GO:0016772,GO:0016773,GO:0019538,GO:0031667,GO:0031668,GO:0031669,GO:0033554,GO:0036211,GO:0042594,GO:0043170,GO:0043412,GO:0043562,GO:0044237,GO:0044238,GO:0044260,GO:0044267,GO:0050896,GO:0051716,GO:0071496,GO:0071704,GO:0140096,GO:1901564 - 0.0 1044.0
DYD1_k127_1814034_1 PFAM SpoVR like protein K06415 - - 1.052e-210 664.0
DYD1_k127_1814034_2 Belongs to the UPF0229 family K09786 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001924 533.0
DYD1_k127_1814034_3 peptidyl-tyrosine sulfation - - - 0.00000000000006192 81.0
DYD1_k127_1814034_4 - - - - 0.000002867 57.0
DYD1_k127_1824470_0 peptidyl-tyrosine sulfation - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001136 626.0
DYD1_k127_1824470_1 Dienelactone hydrolase family - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000004566 262.0
DYD1_k127_1825814_0 Acyl-CoA dehydrogenase, C-terminal domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008583 488.0
DYD1_k127_1829909_0 Belongs to the NqrB RnfD family - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000139 329.0
DYD1_k127_1829909_1 N-acetylmuramoyl-L-alanine amidase K01447 - 3.5.1.28 0.00000000000000000000000000000000000000000000000000000000000000005655 229.0
DYD1_k127_1829909_2 protein conserved in bacteria - - - 0.00000000000000000000000000000000000004127 144.0
DYD1_k127_1836656_0 Master enzyme that delivers sulfur to a number of partners involved in Fe-S cluster assembly, tRNA modification or cofactor biosynthesis. Catalyzes the removal of elemental sulfur atoms from cysteine to produce alanine. Functions as a sulfur delivery protein for Fe-S cluster synthesis onto IscU, an Fe-S scaffold assembly protein, as well as other S acceptor proteins K04487 - 2.8.1.7 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000115 602.0
DYD1_k127_1836656_1 A scaffold on which IscS assembles Fe-S clusters. It is likely that Fe-S cluster coordination is flexible as the role of this complex is to build and then hand off Fe-S clusters K04488 - - 0.000000000000000000000000000000000000000000000000000000000000000002455 227.0
DYD1_k127_1836656_2 Belongs to the HesB IscA family K13628 - - 0.00000000000000000000000000000001198 129.0
DYD1_k127_1836656_3 Chaperone involved in the maturation of iron-sulfur cluster-containing proteins. Has a low intrinsic ATPase activity which is markedly stimulated by HscB. Involved in the maturation of IscU K04044 GO:0000166,GO:0003674,GO:0003824,GO:0005488,GO:0005524,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006457,GO:0006807,GO:0006950,GO:0008144,GO:0008150,GO:0008152,GO:0009266,GO:0009409,GO:0009628,GO:0009987,GO:0010467,GO:0016462,GO:0016787,GO:0016817,GO:0016818,GO:0016887,GO:0017076,GO:0017111,GO:0019538,GO:0030554,GO:0032553,GO:0032555,GO:0032559,GO:0032991,GO:0033554,GO:0035639,GO:0036094,GO:0043167,GO:0043168,GO:0043170,GO:0043531,GO:0044238,GO:0044424,GO:0044444,GO:0044445,GO:0044464,GO:0050896,GO:0051604,GO:0051716,GO:0070417,GO:0071704,GO:0097159,GO:0097367,GO:0097428,GO:1901265,GO:1901363,GO:1901564,GO:1902494,GO:1990230,GO:1990234 - 0.00000000000000000000354 97.0
DYD1_k127_1836656_4 PFAM heat shock protein DnaJ K04082 - - 0.00000000000001506 81.0
DYD1_k127_183760_0 serine threonine protein kinase K08884,K12132 GO:0002237,GO:0003674,GO:0003824,GO:0004672,GO:0004674,GO:0005488,GO:0005539,GO:0005575,GO:0005623,GO:0005886,GO:0006464,GO:0006468,GO:0006793,GO:0006796,GO:0006807,GO:0007154,GO:0007165,GO:0008150,GO:0008152,GO:0009605,GO:0009607,GO:0009617,GO:0009719,GO:0009847,GO:0009987,GO:0010033,GO:0010243,GO:0016020,GO:0016301,GO:0016310,GO:0016740,GO:0016772,GO:0016773,GO:0019538,GO:0023052,GO:0032494,GO:0032502,GO:0036211,GO:0042221,GO:0042834,GO:0043170,GO:0043207,GO:0043412,GO:0044237,GO:0044238,GO:0044260,GO:0044267,GO:0044464,GO:0050789,GO:0050794,GO:0050896,GO:0051704,GO:0051707,GO:0051716,GO:0065007,GO:0070887,GO:0071216,GO:0071219,GO:0071224,GO:0071310,GO:0071417,GO:0071495,GO:0071704,GO:0071944,GO:0097367,GO:0140096,GO:1901564,GO:1901698,GO:1901699,GO:1901700,GO:1901701 2.7.11.1 0.0000000000000000000000000000000000000000000000000000000000957 233.0
DYD1_k127_1838561_0 FtsX-like permease family - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002392 591.0
DYD1_k127_1838561_1 - - - - 0.0000000000000000000000000000000003092 134.0
DYD1_k127_1838561_2 Protein of unknown function (DUF433) - - - 0.000000000000000000000000000008694 122.0
DYD1_k127_1838561_3 COG0577 ABC-type antimicrobial peptide transport system, permease component K02004 - - 0.0000000000000000000003952 98.0
DYD1_k127_1840090_0 PFAM Response regulator receiver domain - - - 0.00000000000000000000000000000000000000000000000000000000000001864 224.0
DYD1_k127_1840090_1 Protein tyrosine kinase K12132 - 2.7.11.1 0.00000000000000000000000000000000000000000000000000000005777 215.0
DYD1_k127_1840090_2 Transposase - - - 0.0000000000000000000000000000000000000000000002911 174.0
DYD1_k127_1840090_3 histidine kinase, dimerisation and phosphoacceptor region - - - 0.00000000000000000000000000000000000000000003789 176.0
DYD1_k127_1840090_4 Protein kinase domain K12132 - 2.7.11.1 0.00000000000000000000000000000000000000002899 160.0
DYD1_k127_1840090_5 Transposase - - - 0.00000000000000000005142 96.0
DYD1_k127_1840090_6 Ribonuclease toxin, BrnT, of type II toxin-antitoxin system K09803 - - 0.00000000000000002702 84.0
DYD1_k127_1840090_7 - - - - 0.0000000000000856 73.0
DYD1_k127_1841174_0 PFAM Polynucleotide adenylyltransferase region K00974 - 2.7.7.72 0.00000000000000000000000000000000000000000000000000000000000128 219.0
DYD1_k127_1841174_1 RNA polymerase sigma factor K03088 - - 0.000000000000000000000000000000000000009904 151.0
DYD1_k127_1841174_2 Belongs to the anti-sigma-factor antagonist family K04749 - - 0.000000002408 64.0
DYD1_k127_1845917_0 Sigma-54 interaction domain K07714 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001569 448.0
DYD1_k127_1845917_1 YwiC-like protein - - - 0.000000000000004707 85.0
DYD1_k127_1848792_0 Belongs to the NAD(P)-dependent epimerase dehydratase family. dTDP-glucose dehydratase subfamily K01710,K12450 GO:0000166,GO:0000271,GO:0003674,GO:0003824,GO:0005488,GO:0005575,GO:0005618,GO:0005623,GO:0005975,GO:0005976,GO:0006139,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0008460,GO:0009058,GO:0009059,GO:0009225,GO:0009226,GO:0009987,GO:0016051,GO:0016829,GO:0016835,GO:0016836,GO:0018130,GO:0019305,GO:0019438,GO:0030312,GO:0033692,GO:0034637,GO:0034641,GO:0034645,GO:0034654,GO:0036094,GO:0040007,GO:0043167,GO:0043168,GO:0043170,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044262,GO:0044264,GO:0044271,GO:0044281,GO:0044464,GO:0045226,GO:0046379,GO:0046383,GO:0046483,GO:0048037,GO:0050662,GO:0051287,GO:0055086,GO:0070404,GO:0071704,GO:0071944,GO:0097159,GO:1901135,GO:1901137,GO:1901265,GO:1901360,GO:1901362,GO:1901363,GO:1901576 4.2.1.46,4.2.1.76 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005632 443.0
DYD1_k127_1848792_1 Nucleotidyl transferase K00973 - 2.7.7.24 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002386 340.0
DYD1_k127_1848792_2 Polysaccharide biosynthesis protein K00067 - 1.1.1.133 0.00000000000000000000000000000000000000000000000000000000000000000009106 241.0
DYD1_k127_1848792_3 PFAM Nucleotidyl transferase K00973 - 2.7.7.24 0.0000000000000000000000000000001255 126.0
DYD1_k127_1848792_4 involved in the assembly of lipopolysaccharide (LPS) at the surface of the outer membrane K04744,K09774,K22110 GO:0003674,GO:0005215,GO:0005575,GO:0005623,GO:0006810,GO:0008150,GO:0008643,GO:0008645,GO:0009279,GO:0015267,GO:0015288,GO:0015749,GO:0015750,GO:0015751,GO:0015757,GO:0016020,GO:0019867,GO:0022803,GO:0022829,GO:0022857,GO:0030312,GO:0030313,GO:0031975,GO:0034219,GO:0044462,GO:0044464,GO:0046323,GO:0051179,GO:0051234,GO:0055085,GO:0071702,GO:0071944,GO:1904659 - 0.000000000000000000000000000005607 135.0
DYD1_k127_1848792_5 Polysaccharide biosynthesis protein K01711,K15856 - 1.1.1.281,4.2.1.47 0.0000001251 53.0
DYD1_k127_1857010_0 histidine kinase A domain protein - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001142 485.0
DYD1_k127_1857010_1 Family 5 K02035 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000142 283.0
DYD1_k127_187308_0 Flavin transferase that catalyzes the transfer of the FMN moiety of FAD and its covalent binding to the hydroxyl group of a threonine residue in a target flavoprotein K03734 GO:0000166,GO:0003674,GO:0003824,GO:0005488,GO:0005575,GO:0005623,GO:0005886,GO:0006464,GO:0006807,GO:0008150,GO:0008152,GO:0009897,GO:0009986,GO:0009987,GO:0016020,GO:0016740,GO:0017013,GO:0019538,GO:0030288,GO:0030313,GO:0031224,GO:0031226,GO:0031233,GO:0031237,GO:0031975,GO:0036094,GO:0036211,GO:0042597,GO:0043167,GO:0043168,GO:0043169,GO:0043170,GO:0043412,GO:0044237,GO:0044238,GO:0044260,GO:0044267,GO:0044425,GO:0044459,GO:0044464,GO:0046872,GO:0048037,GO:0050660,GO:0050662,GO:0071704,GO:0071944,GO:0071949,GO:0097159,GO:0098552,GO:0098567,GO:1901265,GO:1901363,GO:1901564 2.7.1.180 0.00000000000000000000000000000000000001506 157.0
DYD1_k127_1884848_0 Histidine kinase K13924 - 2.1.1.80,3.1.1.61 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005712 496.0
DYD1_k127_1884848_1 histidine kinase A domain protein - - - 0.00000000005126 66.0
DYD1_k127_1891115_0 Aminotransferase class-III K09251 - 2.6.1.82 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001196 539.0
DYD1_k127_1891115_1 Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family K07250 - 2.6.1.19,2.6.1.22 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005648 507.0
DYD1_k127_1891115_2 Cupin domain - - - 0.0000000000000000000000000000000000000003196 153.0
DYD1_k127_1891797_0 COGs COG1629 Outer membrane receptor protein mostly Fe transport K02014 - - 0.000000000000000000000000000000000000000000000001876 190.0
DYD1_k127_189544_0 O-Antigen ligase K18814 - - 0.000000000000000000000000000000000000000000000000001099 199.0
DYD1_k127_189544_1 COG1520 FOG WD40-like repeat - - - 0.0000000005909 65.0
DYD1_k127_1922570_0 Belongs to the pyruvate kinase family K00873 GO:0001871,GO:0003674,GO:0003824,GO:0004743,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005975,GO:0006082,GO:0006090,GO:0006091,GO:0006096,GO:0006116,GO:0006139,GO:0006163,GO:0006164,GO:0006165,GO:0006725,GO:0006732,GO:0006733,GO:0006734,GO:0006753,GO:0006754,GO:0006757,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0009056,GO:0009058,GO:0009108,GO:0009117,GO:0009123,GO:0009124,GO:0009126,GO:0009127,GO:0009132,GO:0009135,GO:0009141,GO:0009142,GO:0009144,GO:0009145,GO:0009150,GO:0009152,GO:0009156,GO:0009161,GO:0009165,GO:0009166,GO:0009167,GO:0009168,GO:0009179,GO:0009185,GO:0009199,GO:0009201,GO:0009205,GO:0009206,GO:0009259,GO:0009260,GO:0009986,GO:0009987,GO:0016052,GO:0016053,GO:0016310,GO:0016740,GO:0016772,GO:0016773,GO:0017144,GO:0018130,GO:0019359,GO:0019362,GO:0019363,GO:0019438,GO:0019439,GO:0019637,GO:0019674,GO:0019693,GO:0019752,GO:0030246,GO:0030247,GO:0032787,GO:0034404,GO:0034641,GO:0034654,GO:0034655,GO:0042866,GO:0043436,GO:0044237,GO:0044238,GO:0044248,GO:0044249,GO:0044270,GO:0044271,GO:0044281,GO:0044283,GO:0044424,GO:0044444,GO:0044464,GO:0046031,GO:0046034,GO:0046390,GO:0046394,GO:0046434,GO:0046483,GO:0046496,GO:0046700,GO:0046939,GO:0051186,GO:0051188,GO:0055086,GO:0055114,GO:0071704,GO:0072330,GO:0072521,GO:0072522,GO:0072524,GO:0072525,GO:0090407,GO:1901135,GO:1901137,GO:1901292,GO:1901293,GO:1901360,GO:1901361,GO:1901362,GO:1901564,GO:1901566,GO:1901575,GO:1901576,GO:2001065 2.7.1.40 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001605 417.0
DYD1_k127_1922570_1 type II secretion system protein E K02652 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000001077 280.0
DYD1_k127_1922570_2 DNA internalization-related competence protein ComEC Rec2 K02238 - - 0.0000000000000000000000000000000000000000000002452 182.0
DYD1_k127_1925448_0 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002051 412.0
DYD1_k127_1925448_1 histidine kinase A domain protein - - - 0.0000000000000000000000000000000000000000000000003795 182.0
DYD1_k127_1925448_2 ABC transporter K01990 - - 0.0000000000000000000002233 104.0
DYD1_k127_1929268_0 Protein tyrosine kinase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000003302 304.0
DYD1_k127_1929268_1 COGs COG1629 Outer membrane receptor protein mostly Fe transport K02014 - - 0.000000000000000000000000000000000000000000000000000000000000000000002586 256.0
DYD1_k127_1942802_0 - - - - 0.00000000000000000000000000000000000009643 148.0
DYD1_k127_1942802_1 Protein of Unknown function (DUF2784) - - - 0.000000000000000000000000000005205 123.0
DYD1_k127_1942802_2 von Willebrand factor, type A - - - 0.0000000000000000004771 99.0
DYD1_k127_1943186_0 Belongs to the citrate synthase family K01647 - 2.3.3.1 2.322e-208 655.0
DYD1_k127_1943186_1 Histone-like DNA-binding protein which is capable of wrapping DNA to stabilize it, and thus to prevent its denaturation under extreme environmental conditions K03530 - - 0.0000000000000000005022 89.0
DYD1_k127_1949549_0 Periplasmic binding protein domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003715 429.0
DYD1_k127_1949549_1 ATPases associated with a variety of cellular activities K10441 - 3.6.3.17 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003253 429.0
DYD1_k127_1955950_0 response regulator, receiver K01120 - 3.1.4.17 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002311 483.0
DYD1_k127_1955950_1 Na( ) H( ) antiporter that extrudes sodium in exchange for external protons K03313 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003932 336.0
DYD1_k127_1955950_2 SpoIIAA-like - - - 0.0000000000000000000000000000000000000000001383 163.0
DYD1_k127_1974339_0 Bifunctional enzyme which can phosphorylate or dephosphorylate isocitrate dehydrogenase (IDH) on a specific serine residue. This is a regulatory mechanism which enables bacteria to bypass the Krebs cycle via the glyoxylate shunt in response to the source of carbon. When bacteria are grown on glucose, IDH is fully active and unphosphorylated, but when grown on acetate or ethanol, the activity of IDH declines drastically concomitant with its phosphorylation K00906 - 2.7.11.5 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005657 526.0
DYD1_k127_1974339_1 Calcineurin-like phosphoesterase superfamily domain - - - 0.0000000000000000000000000000000000000000000002566 177.0
DYD1_k127_1986503_0 Amino acid permease K20265 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001038 349.0
DYD1_k127_1986503_1 - - - - 0.000007015 52.0
DYD1_k127_198836_0 IMP dehydrogenase / GMP reductase domain K00088 - 1.1.1.205 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004839 507.0
DYD1_k127_198836_1 histone H2A-K13 ubiquitination K01338,K07157 - 3.4.21.53 0.00000000000000000000000000000001645 136.0
DYD1_k127_198836_2 Belongs to the sigma-70 factor family. ECF subfamily K03088 - - 0.00000000000000000000000000000001792 135.0
DYD1_k127_198836_3 belongs to the thioredoxin family K03671,K20543 - - 0.0000000005948 63.0
DYD1_k127_1988962_0 Metallo-beta-lactamase superfamily K06167 - 3.1.4.55 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000004281 286.0
DYD1_k127_1988962_1 Domain of unknown function (DUF4388) - - - 0.000000000000000000000000000000000000000000006785 178.0
DYD1_k127_1988962_2 riboflavin biosynthesis protein K11753 - 2.7.1.26,2.7.7.2 0.0000004239 52.0
DYD1_k127_2000997_0 negative regulation of protein lipidation K19294 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008321 586.0
DYD1_k127_2000997_1 tRNA (guanine(37)-N(1))-methyltransferase activity - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002236 362.0
DYD1_k127_2011014_0 WD40 repeats K12132 - 2.7.11.1 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003202 338.0
DYD1_k127_2014120_0 Tetratricopeptide repeat - - - 0.00000000000000000000000000000000000000000000000000000000000000000004684 255.0
DYD1_k127_2014120_1 conserved protein UCP033563 - - - 0.00000000000000002581 84.0
DYD1_k127_2014614_0 Histidine kinase K07636 - 2.7.13.3 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008105 336.0
DYD1_k127_2014614_1 Phosphate transporter family K03306 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003033 304.0
DYD1_k127_2014614_2 PFAM response regulator receiver K02483,K07658,K07668 - - 0.00000000000000000000000000000000000000000000000000000000000000000001619 240.0
DYD1_k127_2014614_3 Plays a role in the regulation of phosphate uptake K02039 - - 0.000000000000000000000000000000000000000000000000000000000000001912 225.0
DYD1_k127_2014614_4 PBP superfamily domain K02040 - - 0.00000000000000000000000000000000000000000000000000000000000004327 218.0
DYD1_k127_2014614_5 Protein of unknown function DUF47 K02039,K07220 - - 0.00000000000000000000000000000000000000000000000000002221 194.0
DYD1_k127_2043569_0 Response regulator with CheY-like receiver, AAA-type ATPase, and DNA-binding domains K07714 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004493 433.0
DYD1_k127_2043569_1 PFAM asparagine synthase K06864 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000007885 269.0
DYD1_k127_2043569_2 PFAM FKBP-type peptidyl-prolyl cis-trans isomerase K01802 - 5.2.1.8 0.00000000000000000000000000000000000000000000000000000387 194.0
DYD1_k127_2043569_3 Glycosyl transferase family 41 K09667 GO:0000003,GO:0000123,GO:0000785,GO:0000791,GO:0001678,GO:0001932,GO:0001933,GO:0001934,GO:0002119,GO:0002164,GO:0002237,GO:0003674,GO:0003824,GO:0004721,GO:0004722,GO:0005488,GO:0005515,GO:0005543,GO:0005547,GO:0005575,GO:0005622,GO:0005623,GO:0005634,GO:0005654,GO:0005694,GO:0005737,GO:0005739,GO:0005829,GO:0005886,GO:0005975,GO:0005976,GO:0005977,GO:0006040,GO:0006041,GO:0006047,GO:0006048,GO:0006073,GO:0006091,GO:0006109,GO:0006110,GO:0006111,GO:0006112,GO:0006139,GO:0006140,GO:0006325,GO:0006355,GO:0006357,GO:0006464,GO:0006470,GO:0006473,GO:0006475,GO:0006479,GO:0006486,GO:0006493,GO:0006508,GO:0006725,GO:0006793,GO:0006796,GO:0006807,GO:0006915,GO:0006996,GO:0007005,GO:0007154,GO:0007165,GO:0007275,GO:0007399,GO:0007417,GO:0007420,GO:0007444,GO:0007584,GO:0007610,GO:0007622,GO:0007623,GO:0007626,GO:0008080,GO:0008134,GO:0008150,GO:0008152,GO:0008194,GO:0008213,GO:0008219,GO:0008289,GO:0008361,GO:0008375,GO:0009058,GO:0009059,GO:0009100,GO:0009101,GO:0009225,GO:0009226,GO:0009605,GO:0009607,GO:0009617,GO:0009636,GO:0009719,GO:0009725,GO:0009743,GO:0009746,GO:0009749,GO:0009791,GO:0009888,GO:0009889,GO:0009891,GO:0009892,GO:0009893,GO:0009894,GO:0009895,GO:0009966,GO:0009987,GO:0009991,GO:0010033,GO:0010243,GO:0010467,GO:0010468,GO:0010556,GO:0010557,GO:0010562,GO:0010563,GO:0010604,GO:0010605,GO:0010628,GO:0010638,GO:0010646,GO:0010675,GO:0010799,GO:0010801,GO:0010876,GO:0010906,GO:0010941,GO:0012501,GO:0012505,GO:0015980,GO:0016020,GO:0016043,GO:0016262,GO:0016311,GO:0016407,GO:0016410,GO:0016485,GO:0016569,GO:0016570,GO:0016571,GO:0016573,GO:0016579,GO:0016740,GO:0016746,GO:0016747,GO:0016757,GO:0016758,GO:0016787,GO:0016788,GO:0016791,GO:0018022,GO:0018023,GO:0018130,GO:0018193,GO:0018205,GO:0018393,GO:0018394,GO:0019219,GO:0019220,GO:0019222,GO:0019438,GO:0019538,GO:0019725,GO:0019904,GO:0019915,GO:0022607,GO:0023051,GO:0023052,GO:0030141,GO:0030162,GO:0030246,GO:0030808,GO:0030811,GO:0030900,GO:0031056,GO:0031058,GO:0031060,GO:0031062,GO:0031248,GO:0031323,GO:0031324,GO:0031325,GO:0031326,GO:0031328,GO:0031329,GO:0031330,GO:0031396,GO:0031397,GO:0031399,GO:0031400,GO:0031401,GO:0031410,GO:0031667,GO:0031974,GO:0031981,GO:0031982,GO:0032259,GO:0032268,GO:0032269,GO:0032270,GO:0032386,GO:0032387,GO:0032434,GO:0032435,GO:0032496,GO:0032501,GO:0032502,GO:0032535,GO:0032868,GO:0032869,GO:0032870,GO:0032879,GO:0032880,GO:0032922,GO:0032991,GO:0033036,GO:0033043,GO:0033044,GO:0033135,GO:0033137,GO:0033157,GO:0033218,GO:0033500,GO:0033993,GO:0034284,GO:0034641,GO:0034645,GO:0034654,GO:0034968,GO:0035020,GO:0035091,GO:0035220,GO:0035295,GO:0035556,GO:0036094,GO:0036211,GO:0036477,GO:0040024,GO:0042176,GO:0042177,GO:0042221,GO:0042277,GO:0042325,GO:0042326,GO:0042327,GO:0042578,GO:0042588,GO:0042592,GO:0042593,GO:0042995,GO:0043005,GO:0043025,GO:0043167,GO:0043168,GO:0043170,GO:0043207,GO:0043226,GO:0043227,GO:0043228,GO:0043229,GO:0043231,GO:0043232,GO:0043233,GO:0043255,GO:0043412,GO:0043413,GO:0043414,GO:0043434,GO:0043467,GO:0043470,GO:0043543,GO:0043933,GO:0043967,GO:0043981,GO:0043982,GO:0043984,GO:0044042,GO:0044085,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044262,GO:0044264,GO:0044267,GO:0044271,GO:0044281,GO:0044297,GO:0044422,GO:0044424,GO:0044427,GO:0044428,GO:0044444,GO:0044446,GO:0044451,GO:0044464,GO:0045475,GO:0045793,GO:0045861,GO:0045862,GO:0045893,GO:0045935,GO:0045936,GO:0045937,GO:0045944,GO:0046349,GO:0046483,GO:0046578,GO:0046626,GO:0048015,GO:0048017,GO:0048029,GO:0048311,GO:0048312,GO:0048471,GO:0048511,GO:0048512,GO:0048513,GO:0048518,GO:0048519,GO:0048522,GO:0048523,GO:0048583,GO:0048585,GO:0048731,GO:0048856,GO:0048878,GO:0050789,GO:0050794,GO:0050896,GO:0051049,GO:0051051,GO:0051056,GO:0051128,GO:0051130,GO:0051171,GO:0051172,GO:0051173,GO:0051174,GO:0051179,GO:0051193,GO:0051196,GO:0051223,GO:0051224,GO:0051235,GO:0051246,GO:0051247,GO:0051248,GO:0051252,GO:0051254,GO:0051259,GO:0051260,GO:0051276,GO:0051291,GO:0051568,GO:0051604,GO:0051640,GO:0051641,GO:0051646,GO:0051704,GO:0051707,GO:0051716,GO:0055082,GO:0055086,GO:0055114,GO:0060255,GO:0060322,GO:0060341,GO:0060429,GO:0060548,GO:0061085,GO:0061087,GO:0061136,GO:0062012,GO:0065003,GO:0065007,GO:0065008,GO:0070013,GO:0070085,GO:0070201,GO:0070206,GO:0070207,GO:0070208,GO:0070646,GO:0070647,GO:0070887,GO:0071216,GO:0071219,GO:0071222,GO:0071310,GO:0071322,GO:0071326,GO:0071331,GO:0071333,GO:0071375,GO:0071396,GO:0071417,GO:0071495,GO:0071704,GO:0071840,GO:0071944,GO:0080090,GO:0080134,GO:0080135,GO:0080182,GO:0090066,GO:0090087,GO:0090313,GO:0090315,GO:0090317,GO:0097237,GO:0097363,GO:0097458,GO:0097708,GO:0099503,GO:0120025,GO:0140096,GO:1900037,GO:1900038,GO:1900076,GO:1900180,GO:1900182,GO:1900371,GO:1900542,GO:1901071,GO:1901135,GO:1901137,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576,GO:1901652,GO:1901653,GO:1901698,GO:1901699,GO:1901700,GO:1901701,GO:1901799,GO:1901981,GO:1902275,GO:1902493,GO:1902494,GO:1902531,GO:1902680,GO:1903050,GO:1903051,GO:1903320,GO:1903321,GO:1903362,GO:1903363,GO:1903426,GO:1903428,GO:1903506,GO:1903508,GO:1903533,GO:1903578,GO:1903827,GO:1903828,GO:1903829,GO:1904950,GO:1905269,GO:1905475,GO:1905476,GO:1990234,GO:2000058,GO:2000059,GO:2000112,GO:2000377,GO:2000379,GO:2001141,GO:2001169,GO:2001252 2.4.1.255 0.000000000000000000000496 104.0
DYD1_k127_2043569_4 PFAM blue (type 1) copper domain protein - - - 0.00000003972 60.0
DYD1_k127_2046833_0 PFAM Cytochrome b b6 domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004283 413.0
DYD1_k127_2046833_1 Cytochrome b(C-terminal)/b6/petD - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006523 413.0
DYD1_k127_2046833_2 Cytochrome c - - - 0.00001808 52.0
DYD1_k127_2047706_0 Phosphohydrolase-associated domain K01129 GO:0003674,GO:0003824,GO:0006139,GO:0006163,GO:0006195,GO:0006203,GO:0006725,GO:0006753,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0008832,GO:0009056,GO:0009058,GO:0009117,GO:0009141,GO:0009143,GO:0009144,GO:0009146,GO:0009151,GO:0009155,GO:0009166,GO:0009200,GO:0009204,GO:0009215,GO:0009217,GO:0009262,GO:0009264,GO:0009394,GO:0009987,GO:0016787,GO:0016788,GO:0016793,GO:0018130,GO:0019438,GO:0019439,GO:0019637,GO:0019692,GO:0034404,GO:0034641,GO:0034654,GO:0034655,GO:0042578,GO:0044237,GO:0044238,GO:0044248,GO:0044249,GO:0044270,GO:0044271,GO:0044281,GO:0044283,GO:0046070,GO:0046386,GO:0046434,GO:0046483,GO:0046700,GO:0055086,GO:0071704,GO:0072521,GO:0072523,GO:1901135,GO:1901136,GO:1901292,GO:1901360,GO:1901361,GO:1901362,GO:1901564,GO:1901565,GO:1901575,GO:1901576 3.1.5.1 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005419 402.0
DYD1_k127_2047706_1 PFAM Alcohol dehydrogenase GroES-like domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001063 375.0
DYD1_k127_2047706_2 Rossmann-like domain - - - 0.000000000000000000000000000000000000000000000000009174 192.0
DYD1_k127_2057491_0 Peptidase C39 family K06147 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006949 573.0
DYD1_k127_2057491_1 Coenzyme A transferase K01040 - 2.8.3.12 0.0000000000000000000000000006105 114.0
DYD1_k127_2058309_0 Transposase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007149 461.0
DYD1_k127_2058309_1 Inner membrane component of T3SS, cytoplasmic domain - - - 0.000000000000000000000000000000000000000000000000000000000997 219.0
DYD1_k127_2058309_2 Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family - - - 0.0000000000001343 81.0
DYD1_k127_2063222_0 DNA polymerase III is a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria. This DNA polymerase also exhibits 3' to 5' exonuclease activity K02343 - 2.7.7.7 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004768 352.0
DYD1_k127_2063222_1 phosphorelay signal transduction system - - - 0.000000000000006514 80.0
DYD1_k127_2063222_2 Phosphate acyltransferases K00631 - 2.3.1.15 0.00002301 53.0
DYD1_k127_2063222_4 - - - - 0.0007365 43.0
DYD1_k127_2082321_0 Domain of unknown function (DUF4143) - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000012 282.0
DYD1_k127_2082321_1 Outer membrane efflux protein - - - 0.000000000000000000000000000000000132 149.0
DYD1_k127_20885_0 Glycosyltransferase family 87 - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000008691 303.0
DYD1_k127_2089053_0 Maltooligosyl trehalose synthase K06044 - 5.4.99.15 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009233 606.0
DYD1_k127_2089053_1 Belongs to the Nudix hydrolase family K03574 - 3.6.1.55 0.00000000000000000000000000000000000000007731 162.0
DYD1_k127_2100592_0 cAMP biosynthetic process K08884,K12132 - 2.7.11.1 0.000000000000000000000000000000000000000000000000000000000000000000000000000000005895 292.0
DYD1_k127_2100592_1 Sulfatase K01133 - 3.1.6.6 0.000000000000000000000000000000000000000001589 159.0
DYD1_k127_2100592_2 Protein tyrosine kinase K08884,K12132 - 2.7.11.1 0.00000000000000000000000000000000000000001387 173.0
DYD1_k127_2104101_0 membrane protein involved in D-alanine - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003268 411.0
DYD1_k127_2104101_1 Protein kinase domain K12132 - 2.7.11.1 0.00000000000000000000000000000000000000000000000000000000000009276 224.0
DYD1_k127_2104101_2 - - - - 0.0000000000000000000000000000000000000000000000000000006645 205.0
DYD1_k127_2116393_0 amidohydrolase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002059 428.0
DYD1_k127_2116393_1 Dolichyl-phosphate-mannose-protein mannosyltransferase - - - 0.0000000000000000000000000000000000008473 143.0
DYD1_k127_21190_0 Transporter, CPA2 family - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000004766 261.0
DYD1_k127_21190_1 Protein of unknown function (DUF502) - - - 0.00000000000000000000000000000000000000000000000000001222 194.0
DYD1_k127_21190_2 Belongs to the peptidase S1C family K04691,K04771,K04772 - 3.4.21.107 0.000000000000000000008312 106.0
DYD1_k127_212565_0 Belongs to the MsrB Met sulfoxide reductase family K07305 - 1.8.4.12 0.00000000000000000000000000000000000000000000000000000000000000291 220.0
DYD1_k127_212565_1 - - - - 0.00000000000000000000000000000000000000000000000000000000001059 213.0
DYD1_k127_212565_2 Belongs to the UPF0312 family - - - 0.0000003597 60.0
DYD1_k127_212565_3 - - - - 0.0000009454 51.0
DYD1_k127_2131273_0 Peptidase M48 - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006934 404.0
DYD1_k127_2131273_1 Dinucleotide-utilizing enzymes involved in molybdopterin and thiamine biosynthesis family 2 K03148,K21029 - 2.7.7.73,2.7.7.80 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001234 312.0
DYD1_k127_2131273_2 Putative ATP-binding cassette K01992 - - 0.0000000000000000000000000000000000000000000000000009356 192.0
DYD1_k127_2143254_0 Histidine kinase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000006853 305.0
DYD1_k127_2143254_1 LytTr DNA-binding domain - - - 0.00000000000000000000000000000000000000000000000000001553 196.0
DYD1_k127_2143254_2 hydrolases or acyltransferases (alpha beta hydrolase superfamily) - - - 0.00000000001646 69.0
DYD1_k127_2154461_0 Cys/Met metabolism PLP-dependent enzyme - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004454 521.0
DYD1_k127_2154461_1 Serine Threonine protein kinase K08884,K12132 - 2.7.11.1 0.00000000000000000000000000000000000000000000000000000006483 218.0
DYD1_k127_2154461_2 Protein kinase domain K12132 - 2.7.11.1 0.0000000000000000000000000000000000000000000001537 190.0
DYD1_k127_2154461_3 Transcriptional regulator PadR-like family - - - 0.000000000000000000000000000000000002473 141.0
DYD1_k127_2154461_4 Sulfurtransferase TusA - - - 0.00000000000000000000001789 101.0
DYD1_k127_2154461_5 MacB-like periplasmic core domain - - - 0.000000000000003414 79.0
DYD1_k127_2164558_0 Catalyzes the reversible transfer of the terminal phosphate of ATP to form a long-chain polyphosphate (polyP) K00937 - 2.7.4.1 3.841e-219 700.0
DYD1_k127_2164558_1 Ppx GppA phosphatase family K01524 - 3.6.1.11,3.6.1.40 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001331 381.0
DYD1_k127_2164558_2 HWE histidine kinase - - - 0.000000000000000000000003969 110.0
DYD1_k127_2164728_0 unfolded protein binding - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009815 492.0
DYD1_k127_2164728_1 Protein tyrosine kinase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001284 342.0
DYD1_k127_2164728_2 protein conserved in bacteria - - - 0.00000000000000000000000000000000000000000000000000000000000000000001577 241.0
DYD1_k127_2164728_3 membrane - - - 0.00000000000000000000003264 109.0
DYD1_k127_2164894_0 COG1233 Phytoene dehydrogenase and related proteins K10027 - 1.3.99.26,1.3.99.28,1.3.99.29,1.3.99.31 0.0000000000000000000000000000000103 144.0
DYD1_k127_2164894_1 4fe-4S ferredoxin, iron-sulfur binding domain protein - - - 0.000000000000000000000000003056 128.0
DYD1_k127_2164894_2 Serine aminopeptidase, S33 - - - 0.00000000000000000000001336 110.0
DYD1_k127_2166143_0 Couples transcription and DNA repair by recognizing RNA polymerase (RNAP) stalled at DNA lesions. Mediates ATP-dependent release of RNAP and its truncated transcript from the DNA, and recruitment of nucleotide excision repair machinery to the damaged site K03723 - - 5.897e-292 934.0
DYD1_k127_2166143_1 response regulator K07712 - - 0.0000000000000000000000000000000000000000001821 171.0
DYD1_k127_2166143_2 Peptidylprolyl isomerase K03771 - 5.2.1.8 0.0000000000000000000000001984 117.0
DYD1_k127_2166143_3 Catalyzes the ADP transfer from ATP to D-glycero-beta-D- manno-heptose 1-phosphate, yielding ADP-D-glycero-beta-D-manno- heptose - - - 0.0000000000000002114 79.0
DYD1_k127_2190850_0 Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family K03296 - - 2.281e-243 783.0
DYD1_k127_2190850_1 Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family - - - 0.000000000000000000000000000000000000000000000000598 189.0
DYD1_k127_2205063_0 Vault protein inter-alpha-trypsin domain K07114 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002077 576.0
DYD1_k127_2205063_1 AAA domain, putative AbiEii toxin, Type IV TA system K01990 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001656 310.0
DYD1_k127_2205063_2 - K19693 - - 0.000000000000000000000000000000000000000000000000000000000000000000005123 259.0
DYD1_k127_2205063_3 PFAM ABC-2 type transporter K01992 - - 0.0000000000000000000000000000000000000000000000000003163 198.0
DYD1_k127_2205063_4 peptidyl-tyrosine sulfation - - - 0.000000000000000000001138 107.0
DYD1_k127_222728_0 PFAM Dynamin family protein - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002344 593.0
DYD1_k127_2235051_0 Receptor family ligand binding region K01999 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000004237 252.0
DYD1_k127_2235051_1 FAD binding domain K00103,K00279 - 1.1.3.8,1.5.99.12 0.00000000000000000000000000000000000000000000000000000000001993 216.0
DYD1_k127_2250200_0 Glycosyl hydrolase family 65 central catalytic domain K01194 - 3.2.1.28 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004639 394.0
DYD1_k127_2250200_1 Belongs to the sigma-70 factor family. ECF subfamily K03088 - - 0.000000002539 66.0
DYD1_k127_2250200_2 Cysteine-rich secretory protein family - - - 0.0002636 53.0
DYD1_k127_2250200_3 Anti-sigma-K factor rskA - - - 0.0009021 50.0
DYD1_k127_2261540_0 His Kinase A (phosphoacceptor) domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000525 516.0
DYD1_k127_2261540_1 ATP-binding region ATPase domain protein K03407,K13490 - 2.7.13.3 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001668 421.0
DYD1_k127_2261540_2 catalyzes the demethylation of specific methylglutamate residues introduced into the chemoreceptors (methyl-accepting chemotaxis proteins) by CheR K03412,K13491 - 3.1.1.61,3.5.1.44 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001816 405.0
DYD1_k127_2261540_3 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain K00322 - 1.6.1.1 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004189 406.0
DYD1_k127_2261540_4 Endonuclease that specifically degrades the RNA of RNA- DNA hybrids K03469 GO:0003674,GO:0003824,GO:0004518,GO:0004519,GO:0004521,GO:0004523,GO:0004540,GO:0006139,GO:0006259,GO:0006260,GO:0006261,GO:0006271,GO:0006273,GO:0006401,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0009056,GO:0009057,GO:0009058,GO:0009059,GO:0009987,GO:0016070,GO:0016787,GO:0016788,GO:0016891,GO:0016893,GO:0019439,GO:0022616,GO:0033567,GO:0034641,GO:0034645,GO:0034655,GO:0043137,GO:0043170,GO:0044237,GO:0044238,GO:0044248,GO:0044249,GO:0044260,GO:0044265,GO:0044270,GO:0046483,GO:0046700,GO:0071704,GO:0090304,GO:0090305,GO:0090501,GO:0090502,GO:0140098,GO:1901360,GO:1901361,GO:1901575,GO:1901576 3.1.26.4 0.00000000000000000000000000000000000000000000000000000000000000000145 231.0
DYD1_k127_2263700_0 Aldehyde dehydrogenase family K00138 - - 3.199e-222 698.0
DYD1_k127_2263700_1 serine threonine protein kinase K12132 - 2.7.11.1 0.000000000000000000000000000000000000000000000000005416 207.0
DYD1_k127_2266779_0 Histidine kinase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003311 343.0
DYD1_k127_2266779_1 PFAM Semialdehyde dehydrogenase NAD - binding K00215 - 1.17.1.8 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000006301 297.0
DYD1_k127_2266779_2 helix_turn_helix, Lux Regulon - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000004478 261.0
DYD1_k127_2274596_0 acetyl-CoA carboxylase, biotin carboxylase K01961 - 6.3.4.14,6.4.1.2 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001338 590.0
DYD1_k127_2274596_1 Gram-negative bacterial TonB protein C-terminal K03832 - - 0.000000000000000000000000000000000000000007051 164.0
DYD1_k127_2274596_2 Domain of unknown function (DUF4416) - - - 0.00000000000000000000000000000000000000003734 158.0
DYD1_k127_2274596_3 Condenses 4-methyl-5-(beta-hydroxyethyl)thiazole monophosphate (THZ-P) and 2-methyl-4-amino-5-hydroxymethyl pyrimidine pyrophosphate (HMP-PP) to form thiamine monophosphate (TMP) K00788 - 2.5.1.3 0.0000000000000000000000000000000000006058 149.0
DYD1_k127_2274596_4 PFAM Conserved carboxylase region K01571,K01960 - 4.1.1.3,6.4.1.1 0.000000000000000000000000000000000255 137.0
DYD1_k127_2274596_5 Tetratricopeptide repeat - - - 0.000000000000000000000000006836 121.0
DYD1_k127_2274596_6 Roadblock/LC7 domain - - - 0.000003571 52.0
DYD1_k127_2274596_7 MotA TolQ ExbB proton channel K03561,K03562 - - 0.0009687 42.0
DYD1_k127_228534_0 Amidohydrolase family - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001125 518.0
DYD1_k127_228534_1 Amino acid permease K20265 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000006156 311.0
DYD1_k127_228534_2 Serine threonine protein kinase K12132 - 2.7.11.1 0.0000000000000000000000000000000000000000000000000000000000008881 224.0
DYD1_k127_2300839_0 Belongs to the peptidase S16 family - - - 0.0000000000000000000000000000000000000000000000000001096 195.0
DYD1_k127_2300839_1 TIGRFAM intracellular protease, PfpI family K05520 - 3.5.1.124 0.00003188 47.0
DYD1_k127_2301319_0 Acyl-CoA dehydrogenase, C-terminal domain K00248 - 1.3.8.1 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002405 447.0
DYD1_k127_2301319_1 Stage II sporulation protein K06381 - - 0.0000000000000000000000000000000000000007819 169.0
DYD1_k127_2304181_0 General (non sugar-specific) component of the phosphoenolpyruvate-dependent sugar phosphotransferase system (sugar PTS). This major carbohydrate active-transport system catalyzes the phosphorylation of incoming sugar substrates concomitantly with their translocation across the cell membrane. Enzyme I transfers the phosphoryl group from phosphoenolpyruvate (PEP) to the phosphoryl carrier protein (HPr) K01007,K08483 - 2.7.3.9,2.7.9.2 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002729 486.0
DYD1_k127_2304181_1 Displays ATPase and GTPase activities K06958 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000002519 294.0
DYD1_k127_2304181_2 PTS system fructose IIA component K02793,K02794,K02821 - 2.7.1.191,2.7.1.194 0.000000000000000000000000000000038 129.0
DYD1_k127_2304181_3 Phosphocarrier protein HPr K08485,K11189 - - 0.000000000000000000002627 95.0
DYD1_k127_2304181_4 HPr Serine kinase N terminus K06023 GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0044424,GO:0044444,GO:0044464 - 0.00003538 47.0
DYD1_k127_2331157_0 FAD binding domain K00103,K00279 - 1.1.3.8,1.5.99.12 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008904 374.0
DYD1_k127_2353368_0 Mn2 dependent serine threonine protein kinase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001251 357.0
DYD1_k127_2353368_1 COG0589 Universal stress protein UspA and related nucleotide-binding proteins - - - 0.0000000000000000000000000000001004 136.0
DYD1_k127_2353368_2 - - - - 0.00000002459 67.0
DYD1_k127_2353368_3 Domain in cystathionine beta-synthase and other proteins. - - - 0.0000003943 54.0
DYD1_k127_2353368_4 Domain in cystathionine beta-synthase and other proteins. - - - 0.00001158 48.0
DYD1_k127_2358425_0 Provides the (R)-glutamate required for cell wall biosynthesis K01776 - 5.1.1.3 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001157 310.0
DYD1_k127_2358425_1 Catalyzes the 1,3-allylic rearrangement of the homoallylic substrate isopentenyl (IPP) to its highly electrophilic allylic isomer, dimethylallyl diphosphate (DMAPP) K01823 - 5.3.3.2 0.0000000000000000000000000000000000000000000000000000003103 197.0
DYD1_k127_2358425_2 Catalyzes the hydrolysis of a monocarboxylic acid amid to form a monocarboxylate and ammonia K01426 - 3.5.1.4 0.00000000000000000000000000000000000000000000002252 176.0
DYD1_k127_2358425_3 UDP-glucoronosyl and UDP-glucosyl transferase - - - 0.0000000000000000000004058 109.0
DYD1_k127_2368644_0 Catalyzes the reversible conversion of 2- phosphoglycerate into phosphoenolpyruvate. It is essential for the degradation of carbohydrates via glycolysis K01689 - 4.2.1.11 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004196 471.0
DYD1_k127_2368644_1 Catalyzes the interconversion of 2-phosphoglycerate and 3-phosphoglycerate K01834 - 5.4.2.11 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001277 399.0
DYD1_k127_2368644_2 EVE domain - - - 0.00000000000000000000000000000000000000000000002201 174.0
DYD1_k127_2368644_3 - - - - 0.0000000000000000000000000000000001769 140.0
DYD1_k127_2376704_0 TPR repeat - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000845 411.0
DYD1_k127_2376704_1 chaperone-mediated protein folding - - - 0.00000000000000000000000000000000000000000000002571 192.0
DYD1_k127_2376704_2 Uncharacterized ACR, COG1993 K09137 - - 0.0000000000000000000000000003233 116.0
DYD1_k127_2376704_3 sigma factor activity K02405 - - 0.00000000000000000000001343 111.0
DYD1_k127_2383681_0 PFAM Peptidase M1 membrane alanine aminopeptidase - - - 0.000000000000000000000000000000000000000000000000000001212 206.0
DYD1_k127_2383681_1 Protein of unknown function (DUF3309) - - - 0.0000000000000000137 82.0
DYD1_k127_2383681_3 Phosphodiester glycosidase - - - 0.000002004 59.0
DYD1_k127_2399253_0 COG0119 Isopropylmalate homocitrate citramalate synthases K01640 - 4.1.3.4 0.00000000000000000000000000000000000000000000000000000000000000000000000000001335 270.0
DYD1_k127_2399253_1 Belongs to the UPF0403 family - - - 0.00000000000000000000000000000000000000000003135 164.0
DYD1_k127_2399253_2 TIGRFAM Oxaloacetate decarboxylase, alpha subunit K01960 - 6.4.1.1 0.00000007446 61.0
DYD1_k127_2400031_0 Surface antigen K07277 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003718 363.0
DYD1_k127_2400031_1 TamB, inner membrane protein subunit of TAM complex K09800 - - 0.00000000000001721 79.0
DYD1_k127_2400031_2 SurA N-terminal domain K03771 - 5.2.1.8 0.00000001338 64.0
DYD1_k127_2407001_0 ATPases associated with a variety of cellular activities K05833 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002677 374.0
DYD1_k127_2407001_1 ABC transporter K01989 - - 0.00000000000000000000000000000000000000000000000001551 195.0
DYD1_k127_2407001_2 transporter antisigma-factor antagonist STAS K04749 - - 0.00000000000000000000000001207 112.0
DYD1_k127_2407001_3 Belongs to the binding-protein-dependent transport system permease family K05832 - - 0.00000000000000000001615 91.0
DYD1_k127_2407001_4 PFAM Sulfate transporter antisigma-factor antagonist STAS - - - 0.0000004365 57.0
DYD1_k127_2407325_0 PEP-utilising enzyme, mobile domain K01006 - 2.7.9.1 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001815 574.0
DYD1_k127_2407325_1 Belongs to the multicopper oxidase YfiH RL5 family K05810 GO:0003674,GO:0003824,GO:0005488,GO:0005507,GO:0005515,GO:0008150,GO:0008152,GO:0016491,GO:0016679,GO:0016682,GO:0042802,GO:0042803,GO:0043167,GO:0043169,GO:0046872,GO:0046914,GO:0046983,GO:0055114 - 0.0000000000000000000000000000000001553 141.0
DYD1_k127_2407325_2 peptidyl-tyrosine sulfation - - - 0.00000000000000001001 90.0
DYD1_k127_2409150_0 Involved in the biosynthesis of isoprenoids. Catalyzes the 1,3-allylic rearrangement of the homoallylic substrate isopentenyl (IPP) to its allylic isomer, dimethylallyl diphosphate (DMAPP) K01823 - 5.3.3.2 0.00000000000000000000000000000009188 129.0
DYD1_k127_2409150_1 Evidence 3 Function proposed based on presence of conserved amino acid motif, structural feature or limited homology K05996,K07752 - 3.4.17.18,3.4.17.22 0.00000000000000000000000009828 115.0
DYD1_k127_2409150_2 Transcriptional regulator - - - 0.00000000000000000008979 93.0
DYD1_k127_2409150_3 Belongs to the class IV-like SAM-binding methyltransferase superfamily. RNA methyltransferase TrmH family K03218 - 2.1.1.185 0.0000000000003174 72.0
DYD1_k127_2409150_4 - - - - 0.0000004235 60.0
DYD1_k127_2419664_0 Transferrin receptor-like dimerisation domain K01301 - 3.4.17.21 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001024 400.0
DYD1_k127_2419664_1 pyrroloquinoline quinone binding - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004643 371.0
DYD1_k127_2419664_2 PFAM Adenosine specific kinase K09129 - - 0.000000000000000000000000000000000000000000000000000000000000000000001027 240.0
DYD1_k127_2419664_3 NmrA-like family - - - 0.0000000000000000000000000000000000000000000000000000000000000000001708 239.0
DYD1_k127_2419664_4 Cupin superfamily (DUF985) K09705 - - 0.000000000000000000000000000003877 122.0
DYD1_k127_2423375_0 Catalyzes the synthesis of ADP-glucose, a sugar donor used in elongation reactions on alpha-glucans K00975 - 2.7.7.27 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008014 533.0
DYD1_k127_2423375_1 Serine Threonine protein kinase K12132 - 2.7.11.1 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000165 395.0
DYD1_k127_2423375_2 transcriptional regulator - - - 0.0000000000000000000000001919 111.0
DYD1_k127_2441689_0 FAD-dependent pyridine nucleotide-disulphide oxidoreductase - - - 0.00000000000000000000000000002819 136.0
DYD1_k127_2441689_1 (FHA) domain - - - 0.000000005493 68.0
DYD1_k127_2441689_2 Forkhead associated domain - - - 0.00000005507 66.0
DYD1_k127_2441689_3 Protein of unknown function (DUF2662) - - - 0.0000002202 63.0
DYD1_k127_2442215_0 4Fe-4S single cluster domain K06937 - - 3.291e-256 805.0
DYD1_k127_2442215_1 B12 binding domain - - - 6.333e-219 686.0
DYD1_k127_2442215_2 B12 binding domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004931 412.0
DYD1_k127_2442215_3 Elongator protein 3, MiaB family, Radical SAM - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002645 400.0
DYD1_k127_2442969_0 COG4638 Phenylpropionate dioxygenase and related ring-hydroxylating dioxygenases, large terminal subunit K16319 - 1.14.12.1 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005401 413.0
DYD1_k127_2442969_1 Catalyzes the hydrolysis of 10-formyltetrahydrofolate (formyl-FH4) to formate and tetrahydrofolate (FH4) K01433 - 3.5.1.10 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001692 372.0
DYD1_k127_2442969_2 helix_turn_helix isocitrate lyase regulation - - - 0.0000000000000000000000000000000000000000000000000000000000000000004501 239.0
DYD1_k127_2442969_3 Glycosyl transferase family 2 - - - 0.000000001233 61.0
DYD1_k127_2442969_4 Belongs to the glycosyl hydrolase 32 family K03332 GO:0003674,GO:0003824,GO:0004553,GO:0004564,GO:0005975,GO:0005984,GO:0005985,GO:0005987,GO:0008150,GO:0008152,GO:0009056,GO:0009311,GO:0009313,GO:0009987,GO:0016052,GO:0016787,GO:0016798,GO:0044237,GO:0044238,GO:0044248,GO:0044262,GO:0044275,GO:0046352,GO:0071704,GO:1901575 3.2.1.80 0.000368 49.0
DYD1_k127_244439_0 Serine Threonine protein kinase - - - 0.0 1144.0
DYD1_k127_2450620_0 heat shock protein binding - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003721 521.0
DYD1_k127_2450620_1 Belongs to the metallo-dependent hydrolases superfamily. DHOase family. Class I DHOase subfamily K01465 - 3.5.2.3 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001196 435.0
DYD1_k127_2450620_2 PFAM aminotransferase class-III K01845 - 5.4.3.8 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002059 392.0
DYD1_k127_2450620_3 Pyridine nucleotide-disulphide oxidoreductase K00384,K21567 - 1.18.1.2,1.19.1.1,1.8.1.9 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000323 371.0
DYD1_k127_2450620_4 ferredoxin-NADP+ reductase activity - - - 0.000000000000000000000000000000000000000000000000000733 195.0
DYD1_k127_2450620_5 - - - - 0.00000000000002893 80.0
DYD1_k127_2455953_0 Bacterial protein of unknown function (DUF885) - - - 1.738e-205 655.0
DYD1_k127_2455953_1 PQQ-like domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000001892 234.0
DYD1_k127_2455953_2 TIGRFAM intracellular protease, PfpI family K05520 - 3.5.1.124 0.00000000000000000000000000000000000000000000000000000000003425 211.0
DYD1_k127_2473900_0 COGs COG1629 Outer membrane receptor protein mostly Fe transport K02014 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007079 331.0
DYD1_k127_2473900_1 PFAM response regulator receiver K02477 - - 0.0000000000000000000000008727 108.0
DYD1_k127_2473900_2 PFAM beta-lactamase domain protein - - - 0.000000000000000007915 85.0
DYD1_k127_2473900_4 Membrane - - - 0.000000005624 64.0
DYD1_k127_2478634_0 protein kinase activity K12132 - 2.7.11.1 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000141 386.0
DYD1_k127_2481900_0 Two component regulator propeller - - - 0.0000000000000000000000000000000000000000000000000000000000000000003645 253.0
DYD1_k127_2481900_1 Stage II sporulation protein K06381 - - 0.00000000000000000000000000000000355 143.0
DYD1_k127_2481900_2 Stage II sporulation D domain protein K06381 - - 0.00000000000000000004263 102.0
DYD1_k127_2481900_3 Protein of unknown function (DUF1684) K09164 - - 0.00000000002003 63.0
DYD1_k127_2485445_0 Tetratricopeptide repeat - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001088 458.0
DYD1_k127_2485445_1 23S rRNA-intervening sequence protein - - - 0.00000000000000000000000000000000000006655 146.0
DYD1_k127_2485445_2 COGs COG1629 Outer membrane receptor protein mostly Fe transport K02014 - - 0.0000000000000001821 89.0
DYD1_k127_249093_0 Leukotriene A4 hydrolase, C-terminal - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002104 504.0
DYD1_k127_249093_1 COG0457 FOG TPR repeat - - - 0.0000001929 64.0
DYD1_k127_2499985_0 Protein kinase domain K12132 - 2.7.11.1 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002543 521.0
DYD1_k127_2506675_0 Alcohol dehydrogenase GroES-like domain K13953 - 1.1.1.1 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005569 462.0
DYD1_k127_2506675_1 Peptidase dimerisation domain K01438 - 3.5.1.16 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002372 397.0
DYD1_k127_2506675_2 Putative neutral zinc metallopeptidase K07054 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001429 323.0
DYD1_k127_2506675_3 Bacterial extracellular solute-binding protein K11069 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001107 310.0
DYD1_k127_2506675_4 Amidinotransferase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005708 304.0
DYD1_k127_2506675_5 serine threonine protein kinase K08884,K12132 - 2.7.11.1 0.00000000000000000000000000000000000000000000000000000000000000000000000000000002774 287.0
DYD1_k127_2506675_6 permease - - - 0.000000000000000000000000000000000000000000000000000000006029 213.0
DYD1_k127_2506675_7 Uncharacterized ACR, COG1678 - - - 0.000000000000000000000000000008974 125.0
DYD1_k127_2506679_0 PFAM Phenylalanine and histidine ammonia-lyase K01745 - 4.3.1.3 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002037 490.0
DYD1_k127_2506679_1 Plays an important role in the de novo pathway of purine nucleotide biosynthesis. Catalyzes the first committed step in the biosynthesis of AMP from IMP K01939 GO:0003674,GO:0003824,GO:0004019,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006139,GO:0006163,GO:0006164,GO:0006167,GO:0006725,GO:0006753,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009117,GO:0009123,GO:0009124,GO:0009126,GO:0009127,GO:0009150,GO:0009152,GO:0009156,GO:0009161,GO:0009165,GO:0009167,GO:0009168,GO:0009259,GO:0009260,GO:0009987,GO:0016874,GO:0016879,GO:0017144,GO:0018130,GO:0019438,GO:0019637,GO:0019693,GO:0034641,GO:0034654,GO:0044208,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0044424,GO:0044464,GO:0046033,GO:0046040,GO:0046390,GO:0046483,GO:0055086,GO:0071704,GO:0072521,GO:0072522,GO:0090407,GO:1901135,GO:1901137,GO:1901293,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576 6.3.4.4 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002655 388.0
DYD1_k127_2511578_0 Type I phosphodiesterase / nucleotide pyrophosphatase - - - 0.00000000000000000000000001151 123.0
DYD1_k127_2511578_1 Psort location CytoplasmicMembrane, score - - - 0.000000000000000000001848 110.0
DYD1_k127_2511578_2 peptidyl-tyrosine sulfation - - - 0.0000000000000001021 91.0
DYD1_k127_2513432_0 Bidirectionally degrades single-stranded DNA into large acid-insoluble oligonucleotides, which are then degraded further into small acid-soluble oligonucleotides K03601 - 3.1.11.6 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001656 374.0
DYD1_k127_2513432_1 YmdB-like protein K09769 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001103 320.0
DYD1_k127_2513432_2 Belongs to the FPP GGPP synthase family K13789 - 2.5.1.1,2.5.1.10,2.5.1.29 0.000000000000000000000000000000000000000000000000000009077 193.0
DYD1_k127_2513432_3 Bidirectionally degrades single-stranded DNA into large acid-insoluble oligonucleotides, which are then degraded further into small acid-soluble oligonucleotides K03602 - 3.1.11.6 0.00000000000000009124 82.0
DYD1_k127_2513432_4 Activator of cell division through the inhibition of FtsZ GTPase activity, therefore promoting FtsZ assembly into bundles of protofilaments necessary for the formation of the division Z ring. It is recruited early at mid-cell but it is not essential for cell division K09888 - - 0.0000000000000001443 82.0
DYD1_k127_2513432_5 protein contain chitin-binding domain type 3 K01183,K21606 - 3.2.1.14,3.2.1.202 0.0000000164 66.0
DYD1_k127_2525342_0 Peptidase dimerisation domain - - - 1.335e-194 618.0
DYD1_k127_2542705_0 Tetratricopeptide repeats K12132 - 2.7.11.1 0.000000000000000000000000000000000000000000000000000000000000000000000000000005248 269.0
DYD1_k127_2542705_1 Antitoxin component of a toxin-antitoxin (TA) module - - - 0.000000000000000000000000000003046 121.0
DYD1_k127_2542705_2 Plasmid stabilization system K19092 - - 0.00000000000000007085 84.0
DYD1_k127_2542705_3 PemK-like, MazF-like toxin of type II toxin-antitoxin system K07171 - - 0.0000000004082 66.0
DYD1_k127_2542705_4 Involved in the tonB-independent uptake of proteins - - - 0.00002869 48.0
DYD1_k127_2551788_0 Protein of unknown function (DUF2851) - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000001643 282.0
DYD1_k127_2551788_1 Animal haem peroxidase - - - 0.00000000000145 69.0
DYD1_k127_2551788_2 Polysaccharide deacetylase K22278 GO:0005575,GO:0005623,GO:0016020,GO:0042763,GO:0044464 3.5.1.104 0.00007765 49.0
DYD1_k127_2571116_0 Radical SAM - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005285 388.0
DYD1_k127_2571116_1 Beta-lactamase class C - - - 0.00000000000000000000000000000000000000000000000000000000000000003208 237.0
DYD1_k127_2571116_2 CAAX amino terminal protease family K07052 - - 0.000000000000001584 87.0
DYD1_k127_2571679_0 Carbon-nitrogen hydrolase K03820 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000009075 312.0
DYD1_k127_2571679_1 PFAM Type II secretion system protein E K02652 - - 0.000000000000000000000000000000000000002615 166.0
DYD1_k127_2571679_2 Sporulation related domain - - - 0.0001945 52.0
DYD1_k127_2572_0 Amino acid permease K03294 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000112 325.0
DYD1_k127_2572_1 thiolester hydrolase activity K01179,K06889,K10773,K15853 - 3.2.1.4,4.2.99.18 0.000000000000000000000000000000000000000000000000000000000000000000000000000004286 272.0
DYD1_k127_258214_0 K COG5665 CCR4-NOT transcriptional regulation complex, NOT5 subunit - - - 0.000000000000000000000000000000000000000000000000000000000000000001104 246.0
DYD1_k127_258214_1 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain K00383 GO:0000166,GO:0000302,GO:0000305,GO:0003674,GO:0005488,GO:0005507,GO:0005524,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005739,GO:0006950,GO:0006979,GO:0008144,GO:0008150,GO:0009507,GO:0009532,GO:0009536,GO:0009570,GO:0009987,GO:0010035,GO:0017076,GO:0019725,GO:0030554,GO:0032553,GO:0032555,GO:0032559,GO:0035639,GO:0036094,GO:0042221,GO:0042592,GO:0043167,GO:0043168,GO:0043169,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0044422,GO:0044424,GO:0044434,GO:0044435,GO:0044444,GO:0044446,GO:0044464,GO:0045454,GO:0046872,GO:0046914,GO:0050789,GO:0050794,GO:0050896,GO:0065007,GO:0065008,GO:0097159,GO:0097367,GO:1901265,GO:1901363,GO:1901700 1.8.1.7 0.00000000000000000000000000000000000000000000002581 175.0
DYD1_k127_2586724_0 (ABC) transporter K06147,K18890 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001664 595.0
DYD1_k127_2586724_1 ABC transporter, transmembrane K18889 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004019 518.0
DYD1_k127_2588050_0 NfeD-like C-terminal, partner-binding K07403 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000002612 264.0
DYD1_k127_2588050_1 Belongs to the folylpolyglutamate synthase family K11754 - 6.3.2.12,6.3.2.17 0.00000000000000000000000000000000000000000000000000000000000000000007875 248.0
DYD1_k127_2595577_0 Electron transfer flavoprotein K03521 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003733 322.0
DYD1_k127_2595577_1 COG3956 Protein containing tetrapyrrole methyltransferase domain and MazG-like K02428,K02499 GO:0003674,GO:0003824,GO:0006139,GO:0006163,GO:0006195,GO:0006203,GO:0006213,GO:0006220,GO:0006244,GO:0006725,GO:0006753,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0009056,GO:0009058,GO:0009116,GO:0009117,GO:0009119,GO:0009141,GO:0009143,GO:0009144,GO:0009146,GO:0009147,GO:0009149,GO:0009151,GO:0009155,GO:0009164,GO:0009166,GO:0009199,GO:0009200,GO:0009203,GO:0009204,GO:0009208,GO:0009210,GO:0009211,GO:0009213,GO:0009215,GO:0009217,GO:0009218,GO:0009219,GO:0009222,GO:0009223,GO:0009259,GO:0009261,GO:0009262,GO:0009264,GO:0009394,GO:0009987,GO:0016462,GO:0016787,GO:0016817,GO:0016818,GO:0018130,GO:0019438,GO:0019439,GO:0019637,GO:0019692,GO:0019693,GO:0034404,GO:0034641,GO:0034654,GO:0034655,GO:0034656,GO:0042454,GO:0044237,GO:0044238,GO:0044248,GO:0044249,GO:0044270,GO:0044271,GO:0044281,GO:0044282,GO:0044283,GO:0046046,GO:0046047,GO:0046051,GO:0046052,GO:0046060,GO:0046061,GO:0046070,GO:0046075,GO:0046076,GO:0046080,GO:0046081,GO:0046131,GO:0046133,GO:0046135,GO:0046386,GO:0046434,GO:0046483,GO:0046700,GO:0047429,GO:0055086,GO:0071704,GO:0072521,GO:0072523,GO:0072527,GO:0072529,GO:1901135,GO:1901136,GO:1901292,GO:1901360,GO:1901361,GO:1901362,GO:1901564,GO:1901565,GO:1901575,GO:1901576,GO:1901657,GO:1901658 3.6.1.66 0.000000000000000000000000000000000002179 143.0
DYD1_k127_2595577_2 PBS lyase HEAT-like repeat - - - 0.0000007664 59.0
DYD1_k127_2597037_0 Cytochrome b(C-terminal)/b6/petD K00412 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006938 371.0
DYD1_k127_2597037_1 2-hydroxyglutaryl-CoA dehydratase, D-component K04112 - 1.3.7.8 0.00000000000000000000000000001971 125.0
DYD1_k127_2602503_0 Catalyzes the conversion of inosine 5'-phosphate (IMP) to xanthosine 5'-phosphate (XMP), the first committed and rate- limiting step in the de novo synthesis of guanine nucleotides, and therefore plays an important role in the regulation of cell growth K00088 - 1.1.1.205 2.906e-214 676.0
DYD1_k127_2602503_1 - - - - 0.00000000000000000000000000000000000000000000000000000009506 201.0
DYD1_k127_2602503_2 virion core protein (lumpy skin disease virus) - - - 0.0000000000002729 74.0
DYD1_k127_2606799_0 Alpha beta hydrolase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000009825 281.0
DYD1_k127_2609980_0 peptidoglycan-binding protein - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000005489 281.0
DYD1_k127_2609980_1 PFAM Cytochrome c assembly protein - - - 0.0000000000000000000000000000000000000000000000000000000000000002164 227.0
DYD1_k127_2609980_2 Acetyltransferase (GNAT) family - - - 0.000000000000000000000000000000000000000000000000000000000004131 212.0
DYD1_k127_2609980_3 Peptidase family M23 K21472 - - 0.00000000000000000000000000000000000000000000001919 179.0
DYD1_k127_2613641_0 PPIases accelerate the folding of proteins. It catalyzes the cis-trans isomerization of proline imidic peptide bonds in oligopeptides K01802,K03768 - 5.2.1.8 0.00000000000000000000000000000000000000000000000000001024 195.0
DYD1_k127_2617100_0 DNA polymerase III alpha subunit K02337 - 2.7.7.7 0.000000000000000000000000000000000000000000000000000000000000000000000000000002456 273.0
DYD1_k127_2623718_0 Glycosyl hydrolases family 15 - - - 8.196e-278 867.0
DYD1_k127_2623718_1 Sodium:sulfate symporter transmembrane region - - - 6.339e-199 636.0
DYD1_k127_2623718_2 Alpha amylase, catalytic domain K01176,K01236 - 3.2.1.1,3.2.1.141 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005154 418.0
DYD1_k127_2623718_3 COG COG0589 Universal stress protein UspA and related nucleotide-binding proteins Signal transduction mechanisms - - - 0.0000000000000000000000000000005507 134.0
DYD1_k127_2623718_4 oligosaccharyl transferase activity - - - 0.000000000000000001082 102.0
DYD1_k127_2640624_0 Converts 2C-methyl-D-erythritol 2,4-cyclodiphosphate (ME-2,4cPP) into 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate K03526 GO:0003674,GO:0003824,GO:0006081,GO:0006082,GO:0006090,GO:0006629,GO:0006644,GO:0006720,GO:0006793,GO:0006796,GO:0008150,GO:0008152,GO:0008299,GO:0008610,GO:0008654,GO:0009058,GO:0009240,GO:0009987,GO:0016491,GO:0016725,GO:0019288,GO:0019637,GO:0019682,GO:0019752,GO:0032787,GO:0043436,GO:0044237,GO:0044238,GO:0044249,GO:0044255,GO:0044281,GO:0046429,GO:0046490,GO:0052592,GO:0055114,GO:0071704,GO:0090407,GO:1901135,GO:1901576 1.17.7.1,1.17.7.3 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001799 501.0
DYD1_k127_2640624_1 Methylation of the membrane-bound methyl-accepting chemotaxis proteins (MCP) to form gamma-glutamyl methyl ester residues in MCP K00575 - 2.1.1.80 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000005352 299.0
DYD1_k127_2640624_2 catalyzes the demethylation of specific methylglutamate residues introduced into the chemoreceptors (methyl-accepting chemotaxis proteins) by CheR K03412 - 3.1.1.61,3.5.1.44 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000005263 296.0
DYD1_k127_2640624_3 Digests double-stranded RNA. Involved in the processing of primary rRNA transcript to yield the immediate precursors to the large and small rRNAs (23S and 16S). Processes some mRNAs, and tRNAs when they are encoded in the rRNA operon. Processes pre- crRNA and tracrRNA of type II CRISPR loci if present in the organism K03685 - 3.1.26.3 0.000000000000000000000000000000000000000000000000000005057 199.0
DYD1_k127_2640624_4 HEAT repeat - - - 0.0000000000000000000000000000000000000000000008372 189.0
DYD1_k127_2646148_0 Exopeptidase that catalyzes the hydrolytic cleavage of multi-L-arginyl-poly-L-aspartic acid (cyanophycin - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003512 383.0
DYD1_k127_2646148_1 amidohydrolase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007593 349.0
DYD1_k127_2646148_2 Destroys radicals which are normally produced within the cells and which are toxic to biological systems K04564 - 1.15.1.1 0.000000000000000000000000000000000000000000000000000000000000000000000000188 252.0
DYD1_k127_2646148_3 DinB superfamily - - - 0.00000000000000000000000000000000000000000000000000000000000000000003011 235.0
DYD1_k127_2646148_4 bacterial OsmY and nodulation domain K04065 - - 0.00000000000000000007021 96.0
DYD1_k127_2646148_5 Domain in cystathionine beta-synthase and other proteins. - - - 0.00009277 45.0
DYD1_k127_266181_0 COGs COG2885 Outer membrane protein and related peptidoglycan-associated (lipo)protein K02557,K03286 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001577 495.0
DYD1_k127_266181_1 TIGRFAM intracellular protease, PfpI family K05520 - 3.5.1.124 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002399 304.0
DYD1_k127_266181_2 TIGRFAM Small GTP-binding protein K06883 - - 0.00000000000000000000000000000000000000000000000000000000000001701 219.0
DYD1_k127_266181_3 Protein conserved in bacteria - - - 0.00000000000000000000000000000000000003088 150.0
DYD1_k127_266181_4 PFAM Lytic transglycosylase catalytic K08309 - - 0.00000000000000000000000000002145 126.0
DYD1_k127_266181_5 signal transduction protein containing a membrane domain an EAL and a GGDEF domain - - - 0.00000000000006439 81.0
DYD1_k127_266181_6 histidine kinase A domain protein - - - 0.0000000000001781 82.0
DYD1_k127_266181_7 PFAM adenylyl cyclase class-3 4 guanylyl cyclase - - - 0.000000000003105 78.0
DYD1_k127_2662416_0 Vault protein inter-alpha-trypsin domain K07114 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005805 422.0
DYD1_k127_2662416_1 Putative outer membrane beta-barrel porin, MtrB/PioB - - - 0.00000000000000000000000000000001304 145.0
DYD1_k127_2666171_0 Flavin containing amine oxidoreductase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002216 522.0
DYD1_k127_2678132_0 Serine threonine protein kinase K12132 - 2.7.11.1 0.0000000000000000000000000000000000000000000000000000000000000005042 249.0
DYD1_k127_2690015_0 epimerase K02377 - 1.1.1.271 0.0000000000000000000000000000000000000000000000000000000000000000006362 235.0
DYD1_k127_2690015_1 Part of the outer membrane protein assembly complex, which is involved in assembly and insertion of beta-barrel proteins into the outer membrane - - - 0.000000000000000000000001618 112.0
DYD1_k127_2690015_2 protein possibly involved in aromatic compounds catabolism K02614 - - 0.00000000000001176 79.0
DYD1_k127_2690015_3 PFAM Peptidase M23 K21471 - - 0.00000000000003423 73.0
DYD1_k127_2691811_0 Protein kinase domain K12132 - 2.7.11.1 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003334 446.0
DYD1_k127_2691811_1 Protein kinase domain K12132 - 2.7.11.1 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003342 448.0
DYD1_k127_2691811_2 Involved in the tonB-independent uptake of proteins K08884,K12132 - 2.7.11.1 0.00000000000000000001582 93.0
DYD1_k127_2691811_3 PemK-like, MazF-like toxin of type II toxin-antitoxin system K07171 - - 0.00000008941 58.0
DYD1_k127_2696880_0 Dehydrogenase E1 component K00161,K00166 - 1.2.4.1,1.2.4.4 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000088 386.0
DYD1_k127_2702449_0 elongation factor G K02355 - - 8.49e-200 644.0
DYD1_k127_2702449_1 Glutathione synthase Ribosomal protein S6 modification enzyme (Glutaminyl transferase) K05827,K05844 - 6.3.2.43 0.00000000000000000000000000000000000000000000000000002224 194.0
DYD1_k127_2702449_2 YtxH-like protein - - - 0.0000004006 56.0
DYD1_k127_2720032_0 TIGRFAM succinate dehydrogenase and fumarate reductase iron-sulfur protein K00240,K00245 - 1.3.5.1,1.3.5.4 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004762 401.0
DYD1_k127_2720032_1 Polysaccharide biosynthesis protein - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000005379 253.0
DYD1_k127_2732948_0 Belongs to the prokaryotic molybdopterin-containing oxidoreductase family - - - 9.769e-269 846.0
DYD1_k127_2750711_0 - - - - 0.000000000000000000000000002957 117.0
DYD1_k127_2750711_1 (4S)-4-hydroxy-5-phosphonooxypentane-2,3-dione isomerase activity - - - 0.0000000000000001033 83.0
DYD1_k127_2750711_2 - - - - 0.0001577 49.0
DYD1_k127_2750711_3 Type I phosphodiesterase / nucleotide pyrophosphatase - - - 0.0001803 47.0
DYD1_k127_2764742_0 Catalyzes the condensation reaction of fatty acid synthesis by the addition to an acyl acceptor of two carbons from malonyl-ACP K09458 - 2.3.1.179 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007692 363.0
DYD1_k127_2764742_1 reductase K00059 - 1.1.1.100 0.00000000000000000000000000000000000000000000002042 179.0
DYD1_k127_2764742_2 Nitroreductase family K04719 - 1.13.11.79 0.000000000000000000000000000005092 127.0
DYD1_k127_2764742_3 3-hydroxyoctanoyl-[acyl-carrier-protein] dehydratase activity K02372,K16363 - 3.5.1.108,4.2.1.59 0.0000000000000000000000000005079 119.0
DYD1_k127_2764742_4 Phosphopantetheine attachment site - - - 0.00000000001582 67.0
DYD1_k127_2764742_5 Beta-ketoacyl synthase, C-terminal domain K09458 - 2.3.1.179 0.0000002863 62.0
DYD1_k127_2778550_0 Belongs to the peptidase M24B family K01262 - 3.4.11.9 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001467 445.0
DYD1_k127_2778550_1 Belongs to the aldehyde dehydrogenase family K00128,K00138 - 1.2.1.3 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009117 389.0
DYD1_k127_2778550_2 Protein of unknown function (DUF1684) K09164 - - 0.0000000000000000000000000000000000005194 150.0
DYD1_k127_2790246_0 smart pdz dhr glgf K04771,K04772 GO:0003674,GO:0003824,GO:0004175,GO:0004252,GO:0005575,GO:0005623,GO:0006508,GO:0006807,GO:0008150,GO:0008152,GO:0008233,GO:0008236,GO:0016787,GO:0017171,GO:0019538,GO:0030288,GO:0030313,GO:0031975,GO:0042597,GO:0043170,GO:0044238,GO:0044464,GO:0070011,GO:0071704,GO:0140096,GO:1901564 3.4.21.107 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001377 410.0
DYD1_k127_2790246_1 Protein of unknown function DUF72 - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000001068 280.0
DYD1_k127_2790246_2 Transaldolase is important for the balance of metabolites in the pentose-phosphate pathway K00616 - 2.2.1.2 0.0000000000000000000002218 98.0
DYD1_k127_2790246_3 ROK family - - - 0.0000001422 54.0
DYD1_k127_2796768_0 The UvrABC repair system catalyzes the recognition and processing of DNA lesions. UvrA is an ATPase and a DNA-binding protein. A damage recognition complex composed of 2 uvrA and 2 uvrB subunits scans DNA for abnormalities. When the presence of a lesion has been verified by uvrB, the uvrA molecules dissociate K03701 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008778 490.0
DYD1_k127_2796768_1 Lysylphosphatidylglycerol synthase TM region K07027 - - 0.0000000000000000000000000000000000000000001242 173.0
DYD1_k127_2796768_2 Methionine biosynthesis protein MetW - - - 0.000005702 51.0
DYD1_k127_2809402_0 PFAM Mannosyl oligosaccharide glucosidase - - - 0.0 1032.0
DYD1_k127_2809402_1 alcohol dehydrogenase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006381 569.0
DYD1_k127_2809524_0 transferase activity, transferring glycosyl groups K00754 GO:0003674,GO:0003824,GO:0016740,GO:0016757 - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004503 439.0
DYD1_k127_2809524_1 N-acetylglucosaminylinositol deacetylase activity K01463 - - 0.00000000000000000000000000000000000000000000000000000000000000003636 230.0
DYD1_k127_2809524_2 Bacillithiol biosynthesis BshC K22136 - - 0.0000000000000000000000000000000000000000000000000000000000000001619 241.0
DYD1_k127_2810281_0 Produces ATP from ADP in the presence of a proton gradient across the membrane. The alpha chain is a regulatory subunit K02111 - 3.6.3.14 4.103e-232 727.0
DYD1_k127_2810281_1 Produces ATP from ADP in the presence of a proton gradient across the membrane. The catalytic sites are hosted primarily by the beta subunits K02112 - 3.6.3.14 1.586e-230 721.0
DYD1_k127_2810281_2 Catalyzes the N-acylation of UDP-3-O-acylglucosamine using 3-hydroxyacyl-ACP as the acyl donor. Is involved in the biosynthesis of lipid A, a phosphorylated glycolipid that anchors the lipopolysaccharide to the outer membrane of the cell K02536 - 2.3.1.191 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001392 339.0
DYD1_k127_2810281_3 Produces ATP from ADP in the presence of a proton gradient across the membrane. The gamma chain is believed to be important in regulating ATPase activity and the flow of protons through the CF(0) complex K02115 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000168 274.0
DYD1_k127_2810281_4 Produces ATP from ADP in the presence of a proton gradient across the membrane K02114 GO:0005575,GO:0005623,GO:0005886,GO:0016020,GO:0044464,GO:0071944 - 0.000000000000000000000000000007774 123.0
DYD1_k127_2810281_5 F(1)F(0) ATP synthase produces ATP from ADP in the presence of a proton or sodium gradient. F-type ATPases consist of two structural domains, F(1) containing the extramembraneous catalytic core and F(0) containing the membrane proton channel, linked together by a central stalk and a peripheral stalk. During catalysis, ATP synthesis in the catalytic domain of F(1) is coupled via a rotary mechanism of the central stalk subunits to proton translocation K02113 - - 0.00000000000000000000004802 105.0
DYD1_k127_2810281_6 STAS domain - - - 0.0000000000000008292 81.0
DYD1_k127_2810281_7 F(1)F(0) ATP synthase produces ATP from ADP in the presence of a proton or sodium gradient. F-type ATPases consist of two structural domains, F(1) containing the extramembraneous catalytic core and F(0) containing the membrane proton channel, linked together by a central stalk and a peripheral stalk. During catalysis, ATP synthesis in the catalytic domain of F(1) is coupled via a rotary mechanism of the central stalk subunits to proton translocation K02109 - - 0.000000000002821 73.0
DYD1_k127_2827507_0 Prenyltransferase that catalyzes the transfer of the geranylgeranyl moiety of geranylgeranyl diphosphate (GGPP) to the C2 hydroxyl of (S)-3-O-geranylgeranylglyceryl phosphate (GGGP). This reaction is the second ether-bond-formation step in the biosynthesis of archaeal membrane lipids K17105 - 2.5.1.42 0.00000000000000000000000001439 121.0
DYD1_k127_2827507_1 PFAM von Willebrand factor type A - - - 0.0000004443 56.0
DYD1_k127_2827843_0 Part of a heterotetrameric complex that catalyzes the two-step biosynthesis of anthranilate, an intermediate in the biosynthesis of L-tryptophan. In the first step, the glutamine- binding beta subunit (TrpG) of anthranilate synthase (AS) provides the glutamine amidotransferase activity which generates ammonia as a substrate that, along with chorismate, is used in the second step, catalyzed by the large alpha subunit of AS (TrpE) to produce anthranilate. In the absence of TrpG, TrpE can synthesize anthranilate directly from chorismate and high concentrations of ammonia K01657 - 4.1.3.27 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001338 367.0
DYD1_k127_2827843_1 Catalyzes the transfer of the phosphoribosyl group of 5- phosphorylribose-1-pyrophosphate (PRPP) to anthranilate to yield N-(5'-phosphoribosyl)-anthranilate (PRA) K00766,K13497 - 2.4.2.18,4.1.3.27 0.00000000000000000000000000000000000000000000000000000000000000000000000000001317 271.0
DYD1_k127_2827843_2 TIGRFAM glutamine amidotransferase of anthranilate synthase K01658,K01664 - 2.6.1.85,4.1.3.27 0.000000000000000000000000000000000000000000000000000000000000000000001156 243.0
DYD1_k127_2827843_3 Belongs to the TrpC family K01609,K13498 GO:0003674,GO:0003824,GO:0004425,GO:0016829,GO:0016830,GO:0016831 4.1.1.48,5.3.1.24 0.0000000000000000000000000000000000000000000000000000002661 209.0
DYD1_k127_2832248_0 DEAD-like helicases superfamily - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007377 453.0
DYD1_k127_2832248_1 Confers DNA tethering and processivity to DNA polymerases and other proteins. Acts as a clamp, forming a ring around DNA (a reaction catalyzed by the clamp-loading complex) which diffuses in an ATP-independent manner freely and bidirectionally along dsDNA. Initially characterized for its ability to contact the catalytic subunit of DNA polymerase III (Pol III), a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria K02338 GO:0003674,GO:0003824,GO:0003887,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006139,GO:0006259,GO:0006260,GO:0006261,GO:0006271,GO:0006725,GO:0006807,GO:0006950,GO:0006974,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009360,GO:0009987,GO:0016740,GO:0016772,GO:0016779,GO:0018130,GO:0019438,GO:0022616,GO:0032991,GO:0033554,GO:0034061,GO:0034641,GO:0034645,GO:0034654,GO:0042575,GO:0042802,GO:0043170,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044271,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0050896,GO:0051716,GO:0061695,GO:0071704,GO:0071897,GO:0090304,GO:0140097,GO:1901360,GO:1901362,GO:1901576,GO:1902494,GO:1990234 2.7.7.7 0.00000000001685 72.0
DYD1_k127_2836746_0 Tetratricopeptide repeats K12132 - 2.7.11.1 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002235 512.0
DYD1_k127_2836746_1 Methyltransferase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000008986 258.0
DYD1_k127_2836746_2 Domain of unknown function (DUF4143) - - - 0.000000000000000000000000000001926 122.0
DYD1_k127_2840985_0 NHLM bacteriocin system ABC transporter, peptidase ATP-binding protein - - - 1.207e-291 911.0
DYD1_k127_2840985_1 PFAM Formylglycine-generating sulfatase enzyme K12132,K18912 GO:0000096,GO:0000097,GO:0003674,GO:0003824,GO:0005488,GO:0005506,GO:0006082,GO:0006520,GO:0006547,GO:0006548,GO:0006575,GO:0006577,GO:0006578,GO:0006725,GO:0006790,GO:0006807,GO:0008150,GO:0008152,GO:0008198,GO:0008652,GO:0009056,GO:0009058,GO:0009063,GO:0009987,GO:0016053,GO:0016054,GO:0016491,GO:0019439,GO:0019752,GO:0034641,GO:0042398,GO:0043167,GO:0043169,GO:0043436,GO:0044237,GO:0044238,GO:0044248,GO:0044249,GO:0044270,GO:0044271,GO:0044272,GO:0044281,GO:0044282,GO:0044283,GO:0046394,GO:0046395,GO:0046483,GO:0046700,GO:0046872,GO:0046914,GO:0052698,GO:0052699,GO:0052701,GO:0052703,GO:0052704,GO:0052708,GO:0052803,GO:0052805,GO:0055114,GO:0071704,GO:0097164,GO:1901360,GO:1901361,GO:1901564,GO:1901565,GO:1901566,GO:1901575,GO:1901576,GO:1901605,GO:1901606 1.14.99.50,2.7.11.1 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000552 522.0
DYD1_k127_2840985_2 HlyD family secretion protein - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001991 332.0
DYD1_k127_2840985_3 ABC transporter transmembrane region - - - 0.00000000000000000000000000000000000000000000000000000000000000001997 240.0
DYD1_k127_2840985_4 PUA-like domain K00958 - 2.7.7.4 0.000000006902 59.0
DYD1_k127_2844448_0 Type II/IV secretion system protein K02669 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001998 416.0
DYD1_k127_2844448_1 twitching motility protein K02669 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003573 396.0
DYD1_k127_2844448_2 Glycosyltransferase like family 2 K00721 - 2.4.1.83 0.0000000000000000000000000000000000000000000000000000000000000000122 231.0
DYD1_k127_2844448_4 3'-5' exonuclease related to the exonuclease domain of PolB K07501 - - 0.00000000000000000000000000005558 126.0
DYD1_k127_2844448_5 Part of the outer membrane protein assembly complex, which is involved in assembly and insertion of beta-barrel proteins into the outer membrane K05807 - - 0.00000007397 64.0
DYD1_k127_2844448_6 - - - - 0.0002533 49.0
DYD1_k127_2847374_0 Peptidase S46 - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004454 357.0
DYD1_k127_2847374_1 Involved in peptide bond synthesis. Stimulates efficient translation and peptide-bond synthesis on native or reconstituted 70S ribosomes in vitro. Probably functions indirectly by altering the affinity of the ribosome for aminoacyl-tRNA, thus increasing their reactivity as acceptors for peptidyl transferase K02356 - - 0.000000000000000000000000000000000000000000000000000000000000000000004125 239.0
DYD1_k127_2847374_2 Spermine/spermidine synthase domain K00797 - 2.5.1.16 0.0000000000000000000000000000000000009358 149.0
DYD1_k127_2885679_0 COGs COG1975 Xanthine and CO dehydrogenase maturation factor XdhC CoxF family K07402 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000718 264.0
DYD1_k127_2885679_1 COGs COG3552 Protein containing von Willebrand factor type A (vWA) domain K07161 - - 0.000000000000000000000000000000000000000000000000000000001781 205.0
DYD1_k127_2885679_2 MobA-like NTP transferase domain K07141 - 2.7.7.76 0.00000000000000000000000000000000000622 150.0
DYD1_k127_2885679_3 COGs COG1975 Xanthine and CO dehydrogenase maturation factor XdhC CoxF family K07402 - - 0.00000000000000000000001372 113.0
DYD1_k127_2885679_4 Xanthine and CO dehydrogenases maturation factor, XdhC CoxF family K07402 - - 0.000000000000002728 78.0
DYD1_k127_2893_0 Angiotensin-converting enzyme K01283 - 3.4.15.1 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002384 404.0
DYD1_k127_2893_1 integral membrane protein TIGR02587 - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000005266 295.0
DYD1_k127_2893_2 Aminotransferase class-V K04127 - 5.1.1.17 0.00000000000000000000000000000000000006462 148.0
DYD1_k127_2893_3 TIGRFAM TIGR02588 family protein - - - 0.000000000000000000000000000009917 123.0
DYD1_k127_2896781_0 DNA topoisomerase II activity K03167 - 5.99.1.3 2.748e-261 818.0
DYD1_k127_2896781_1 DNA topoisomerase VI subunit A K03166 - 5.99.1.3 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002308 590.0
DYD1_k127_2896781_2 6-phosphofructokinase activity K00850,K00895,K21071 GO:0000287,GO:0003674,GO:0003824,GO:0005488,GO:0005975,GO:0006002,GO:0006793,GO:0006796,GO:0008150,GO:0008152,GO:0008443,GO:0009987,GO:0016301,GO:0016310,GO:0016740,GO:0016772,GO:0016773,GO:0019200,GO:0019637,GO:0043167,GO:0043169,GO:0044237,GO:0044238,GO:0044262,GO:0046835,GO:0046872,GO:0047334,GO:0071704,GO:1901135 2.7.1.11,2.7.1.90 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003473 417.0
DYD1_k127_2896781_3 Family membership K12132 - 2.7.11.1 0.000000297 58.0
DYD1_k127_2898887_0 PEGA domain - - - 0.0000001011 60.0
DYD1_k127_2898887_1 transcriptional regulator, SARP family - - - 0.00001472 57.0
DYD1_k127_2899206_0 Transmembrane secretion effector - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003826 361.0
DYD1_k127_2899206_1 Two component, sigma54 specific, transcriptional regulator, Fis family K07714 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001681 358.0
DYD1_k127_2899206_2 COG2133 Glucose sorbosone dehydrogenases - - - 0.00000000000000000000000000000000000000000000000000000000000001901 225.0
DYD1_k127_2899206_3 GDSL-like Lipase/Acylhydrolase K10804 - 3.1.1.5 0.000000000000000000000000000000000000004592 150.0
DYD1_k127_2899206_4 PFAM Lipid A - - - 0.000000000000000000000009504 109.0
DYD1_k127_2899206_5 ABC transporter K02003 - - 0.0000000000006743 69.0
DYD1_k127_2899206_6 Involved in protein export. Acts as a chaperone by maintaining the newly synthesized protein in an open conformation. Functions as a peptidyl-prolyl cis-trans isomerase K03545 GO:0005575,GO:0005618,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005886,GO:0006950,GO:0007154,GO:0008150,GO:0009267,GO:0009605,GO:0009987,GO:0009991,GO:0016020,GO:0030312,GO:0031667,GO:0031668,GO:0031669,GO:0033554,GO:0042221,GO:0042594,GO:0044424,GO:0044444,GO:0044464,GO:0046677,GO:0050896,GO:0051716,GO:0071496,GO:0071944 - 0.000005367 48.0
DYD1_k127_2899206_8 GDSL-like Lipase/Acylhydrolase family K10804 - 3.1.1.5 0.00006493 48.0
DYD1_k127_2907658_0 polyphosphate kinase K22468 - 2.7.4.1 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001333 403.0
DYD1_k127_2907658_1 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster - - - 0.000000000000000000000000000000000000000000000000000000787 201.0
DYD1_k127_2907658_2 Pyruvate ferredoxin/flavodoxin oxidoreductase K00172 - 1.2.7.1 0.000000000000000000000000000000000000000000000000000004584 198.0
DYD1_k127_2907658_3 ribonuclease activity - - - 0.0000000000000000000000000000000000000000187 157.0
DYD1_k127_2912320_0 arylsulfatase A - - - 0.0000000000000000000000000000000000000000000000000004942 202.0
DYD1_k127_2912320_1 TIGRFAM phosphohistidine phosphatase SixA K08296 - - 0.000000000000000000000005104 108.0
DYD1_k127_2914635_0 B12 binding domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000006741 291.0
DYD1_k127_2918973_0 efflux transmembrane transporter activity - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000001315 312.0
DYD1_k127_2918973_1 OmpA family - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000005651 283.0
DYD1_k127_2918973_2 Serine threonine protein kinase K12132 - 2.7.11.1 0.000000000000000000000000000000000000000000000000000000000000004661 239.0
DYD1_k127_2920802_0 radical SAM domain protein - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000805 355.0
DYD1_k127_2920802_1 PFAM Cobyrinic acid a,c-diamide synthase K03496 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000008695 301.0
DYD1_k127_2920802_2 Belongs to the ParB family K03497 - - 0.000000000000000000000000000000000000000000000000000000000000000000003889 246.0
DYD1_k127_2920802_3 Belongs to the peptidase S16 family - - - 0.000000000000000000000000000000000000000000001262 167.0
DYD1_k127_2920802_4 Specifically methylates the N7 position of guanine in position 527 of 16S rRNA K03501 GO:0000154,GO:0001510,GO:0003674,GO:0003824,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006139,GO:0006364,GO:0006396,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0008168,GO:0008170,GO:0008173,GO:0008649,GO:0008757,GO:0009451,GO:0009987,GO:0010467,GO:0016070,GO:0016072,GO:0016435,GO:0016740,GO:0016741,GO:0022613,GO:0031167,GO:0032259,GO:0034470,GO:0034641,GO:0034660,GO:0036265,GO:0042254,GO:0043170,GO:0043412,GO:0043414,GO:0044085,GO:0044237,GO:0044238,GO:0044260,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0070043,GO:0070475,GO:0070476,GO:0071704,GO:0071840,GO:0090304,GO:0140098,GO:0140102,GO:1901360 2.1.1.170 0.000000003503 63.0
DYD1_k127_2920802_5 LAGLIDADG DNA endonuclease family - - - 0.00000003292 60.0
DYD1_k127_2930130_0 UvrD REP helicase K16898 - 3.6.4.12 0.0000000000000000000000000000000000000000000000000000000000000000000000000001159 287.0
DYD1_k127_2941435_0 Catalyzes the attachment of threonine to tRNA(Thr) in a two-step reaction L-threonine is first activated by ATP to form Thr-AMP and then transferred to the acceptor end of tRNA(Thr) K01868 - 6.1.1.3 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004725 582.0
DYD1_k127_2941435_1 IF-3 binds to the 30S ribosomal subunit and shifts the equilibrum between 70S ribosomes and their 50S and 30S subunits in favor of the free subunits, thus enhancing the availability of 30S subunits on which protein synthesis initiation begins K02520 - - 0.0000000000000000000000000000000000000000000000000000008318 196.0
DYD1_k127_2941435_2 Binds directly to 23S ribosomal RNA and is necessary for the in vitro assembly process of the 50S ribosomal subunit. It is not involved in the protein synthesizing functions of that subunit K02887 - - 0.0000000000000000000000000000000000002951 143.0
DYD1_k127_2941435_3 Belongs to the bacterial ribosomal protein bL35 family K02916 - - 0.0000000000000001071 81.0
DYD1_k127_2943104_0 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III K15778 - 5.4.2.2,5.4.2.8 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008388 527.0
DYD1_k127_2943104_1 Oxygenase, catalysing oxidative methylation of damaged DNA K09990 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000002034 289.0
DYD1_k127_2943104_2 amidohydrolase K07045 - - 0.000000000000000000000000000000000000000000000000000000000000000000002469 244.0
DYD1_k127_2943104_3 hyperosmotic response K04065 GO:0005575,GO:0005623,GO:0006457,GO:0006950,GO:0006970,GO:0006972,GO:0008150,GO:0009628,GO:0009987,GO:0030288,GO:0030313,GO:0031975,GO:0042597,GO:0044464,GO:0050896,GO:0061077 - 0.00000000000000273 84.0
DYD1_k127_2945429_0 Glycosyl transferases group 1 - - - 0.000000000000000000000000000000000000000000000000000000000000001069 233.0
DYD1_k127_2945429_1 Glycosyl transferase, family 2 - - - 0.000000000000000000000000000000000000000000000000000000000003465 215.0
DYD1_k127_2945429_2 Uncharacterized conserved protein (DUF2304) K09153 - - 0.000000000000000000000009021 104.0
DYD1_k127_2950684_0 PFAM Protein kinase K03413 - - 0.00000000000000000000000000000000000000000000000000668 207.0
DYD1_k127_2950684_1 Could be involved in insertion of integral membrane proteins into the membrane K08998 - - 0.0000000000000000000002212 100.0
DYD1_k127_2950684_2 RNaseP catalyzes the removal of the 5'-leader sequence from pre-tRNA to produce the mature 5'-terminus. It can also cleave other RNA substrates such as 4.5S RNA. The protein component plays an auxiliary but essential role in vivo by binding to the 5'-leader sequence and broadening the substrate specificity of the ribozyme K03536 - 3.1.26.5 0.00000000000000000003353 95.0
DYD1_k127_2950684_3 OPT oligopeptide transporter protein - - - 0.00000000000000237 78.0
DYD1_k127_2950684_4 Ribosomal protein L34 K02914 GO:0003674,GO:0003735,GO:0005198,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0006412,GO:0006518,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0015934,GO:0019538,GO:0022625,GO:0022626,GO:0032991,GO:0034641,GO:0034645,GO:0043043,GO:0043170,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:0071704,GO:1901564,GO:1901566,GO:1901576,GO:1990904 - 0.0000000000001795 71.0
DYD1_k127_2950684_5 Required for the insertion and or proper folding and or complex formation of integral membrane proteins into the membrane. Involved in integration of membrane proteins that insert both dependently and independently of the Sec translocase complex, as well as at least some lipoproteins. Aids folding of multispanning membrane proteins K03217 - - 0.0000428 51.0
DYD1_k127_29522_0 Protein of unknown function (DUF2723) - - - 0.000000000000000000000000000000000000000000000000000000000000000000002513 259.0
DYD1_k127_29522_1 Aspartyl protease - - - 0.000000000000000000000000000000000000000000000000009816 194.0
DYD1_k127_2953605_0 Releases the supercoiling and torsional tension of DNA, which is introduced during the DNA replication and transcription, by transiently cleaving and rejoining one strand of the DNA duplex. Introduces a single-strand break via transesterification at a target site in duplex DNA. The scissile phosphodiester is attacked by the catalytic tyrosine of the enzyme, resulting in the formation of a DNA-(5'-phosphotyrosyl)-enzyme intermediate and the expulsion of a 3'-OH DNA strand. The free DNA strand then undergoes passage around the unbroken strand, thus removing DNA supercoils. Finally, in the religation step, the DNA 3'-OH attacks the covalent intermediate to expel the active-site tyrosine and restore the DNA phosphodiester backbone K03168 - 5.99.1.2 6.19e-237 756.0
DYD1_k127_2953605_1 Catalyzes the folate-dependent formation of 5-methyl- uridine at position 54 (M-5-U54) in all tRNAs K04094 - 2.1.1.74 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001385 334.0
DYD1_k127_2953605_2 TIGRFAM DNA protecting protein DprA K04096 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000006005 281.0
DYD1_k127_2953605_3 Tetratricopeptide repeat K20543 - - 0.000000000000000000000000000004554 125.0
DYD1_k127_2953851_0 PFAM sigma-54 factor interaction domain-containing protein K02481,K07714,K10943 - - 0.0000000000000000000000000000000000000000000000000000000008768 208.0
DYD1_k127_2953851_1 Metallo-beta-lactamase superfamily - - - 0.00000000000000000000000000000000000000000000000000000939 196.0
DYD1_k127_2957233_0 WD40 domain protein beta Propeller K12132 - 2.7.11.1 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001124 498.0
DYD1_k127_2957233_1 Activator of Hsp90 ATPase homolog 1-like protein - - - 0.0000000000000000000000000000000000000000000000003129 180.0
DYD1_k127_2961511_0 PFAM filamentation induced by cAMP protein Fic - - - 0.000000000000000000000000000000000000000000000000000000000000000000002409 238.0
DYD1_k127_2961511_1 Sulfatase - - - 0.0000000000000000000000000000000000000000000009634 186.0
DYD1_k127_2961511_2 Ankyrin repeat - - - 0.000000000000000000000000000003393 134.0
DYD1_k127_2961511_3 PKD domain containing protein K02015 - - 0.000000000000008827 83.0
DYD1_k127_2961511_4 long-chain fatty acid transport protein K06076 - - 0.000000002111 70.0
DYD1_k127_2961511_5 Membrane - - - 0.0008496 48.0
DYD1_k127_2963213_0 Tetratricopeptide repeats K12132 - 2.7.11.1 0.000000000000000000000000000000000000000000000000000000000000000000000001441 252.0
DYD1_k127_2963213_1 Zinc dependent phospholipase C - - - 0.000000000000000007216 86.0
DYD1_k127_2963213_2 spectrin binding - - - 0.000000000000452 81.0
DYD1_k127_2964297_0 ATP-dependent serine protease that mediates the selective degradation of mutant and abnormal proteins as well as certain short-lived regulatory proteins. Required for cellular homeostasis and for survival from DNA damage and developmental changes induced by stress. Degrades polypeptides processively to yield small peptide fragments that are 5 to 10 amino acids long. Binds to DNA in a double-stranded, site-specific manner K01338 - 3.4.21.53 2.517e-257 814.0
DYD1_k127_2964297_1 Facilitates transcription termination by a mechanism that involves Rho binding to the nascent RNA, activation of Rho's RNA-dependent ATPase activity, and release of the mRNA from the DNA template K03628 - - 5.335e-215 672.0
DYD1_k127_2964297_2 Necessary for normal cell division and for the maintenance of normal septation K03978 GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0044424,GO:0044444,GO:0044464 - 0.000000000000000000000000000000001299 137.0
DYD1_k127_2964297_3 50S ribosomal protein L31 K02909 - - 0.00000000000000000000000000006163 117.0
DYD1_k127_2965586_0 Catalyzes the ATP-dependent amination of UTP to CTP with either L-glutamine or ammonia as the source of nitrogen. Regulates intracellular CTP levels through interactions with the four ribonucleotide triphosphates K01937 - 6.3.4.2 2.048e-235 739.0
DYD1_k127_2965586_1 SIS domain K06041 - 5.3.1.13 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005889 347.0
DYD1_k127_2965586_2 Belongs to the KdsA family K01627 - 2.5.1.55 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004629 332.0
DYD1_k127_2965586_3 Activates KDO (a required 8-carbon sugar) for incorporation into bacterial lipopolysaccharide in Gram-negative bacteria K00979 - 2.7.7.38 0.00000000000000000000000000000000000000000000000000000000000000000000000001587 258.0
DYD1_k127_2969181_0 PFAM Integrase, catalytic region - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001071 460.0
DYD1_k127_2969181_1 PFAM IstB domain protein ATP-binding protein - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000006753 256.0
DYD1_k127_2969181_2 ATPase involved in DNA repair - - - 0.0000000000000000004082 88.0
DYD1_k127_2969181_3 GTP binding - - - 0.00000462 48.0
DYD1_k127_297587_0 amino acids such as valine, to avoid such errors it has two additional distinct tRNA(Ile)-dependent editing activities. One activity is designated as 'pretransfer' editing and involves the hydrolysis of activated Val-AMP. The other activity is designated 'posttransfer' editing and involves deacylation of mischarged Val-tRNA(Ile) K01870 - 6.1.1.5 9.914e-307 961.0
DYD1_k127_297587_1 This protein specifically catalyzes the removal of signal peptides from prolipoproteins K03101 - 3.4.23.36 0.0000000000000000000000000002494 120.0
DYD1_k127_2979409_0 Methylmalonyl-CoA mutase K01847,K01848 - 5.4.99.2 1.743e-231 728.0
DYD1_k127_2979409_1 acyl-CoA dehydrogenase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001813 424.0
DYD1_k127_2979409_2 PFAM Nucleotidyl transferase K00971 - 2.7.7.13 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000116 292.0
DYD1_k127_2979409_3 Ribosomal protein S1 K02945 - - 0.0000000000000000000000000000000000000000000000000000000001258 209.0
DYD1_k127_2979409_4 B12 binding domain K01849 - 5.4.99.2 0.00000000000000000000000000000000000000000000000000000762 192.0
DYD1_k127_2979409_5 PFAM Histidine triad (HIT) protein K19710 - 2.7.7.53 0.0000000000000000000000000000000000000000000000000003015 189.0
DYD1_k127_2979409_6 Diguanylate cyclase - - - 0.0000000000000000000000000000000000000000000000001666 194.0
DYD1_k127_2979409_7 nucleic acid-binding protein - - - 0.0000000000000000000000000000000000000003818 154.0
DYD1_k127_2979409_8 Histone-like DNA-binding protein which is capable of wrapping DNA to stabilize it, and thus to prevent its denaturation under extreme environmental conditions K05788 - - 0.00000000000000000000000000003888 119.0
DYD1_k127_2979409_9 Uncharacterised protein family (UPF0175) - - - 0.000000000000000000006831 96.0
DYD1_k127_2993008_0 Bacterial protein of unknown function (DUF885) - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009681 378.0
DYD1_k127_2993008_1 Serine threonine protein kinase K12132 - 2.7.11.1 0.00000000001952 76.0
DYD1_k127_2993825_0 PFAM NAD dependent epimerase dehydratase family K01784,K08678 - 4.1.1.35,5.1.3.2 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005904 388.0
DYD1_k127_2993825_1 PFAM Glycosyl transferase family 2 - - - 0.0000000000000000000000000000000000000000000000000000000000000177 223.0
DYD1_k127_2993825_2 cyclic nucleotide binding K10914 - - 0.0000001116 64.0
DYD1_k127_2993825_3 TPR Domain containing protein K12600 - - 0.00002267 57.0
DYD1_k127_3000311_0 GTP-binding protein TypA K06207 - - 2.266e-218 692.0
DYD1_k127_3000311_1 Protein tyrosine kinase K08282,K12132 - 2.7.11.1 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006482 463.0
DYD1_k127_3000311_2 Metallo-beta-lactamase superfamily K01069 - 3.1.2.6 0.0000000000000000000000000000000000000000000000000000000000000001001 225.0
DYD1_k127_3000311_3 Iron-binding zinc finger CDGSH type K05710 - - 0.000000000000000003075 87.0
DYD1_k127_3023972_0 Transcriptional regulatory protein, C terminal K07664 - - 0.00000000000000000000000000000000000000000000000000000000000000002067 230.0
DYD1_k127_3023972_1 Putative restriction endonuclease - - - 0.000000000000003023 83.0
DYD1_k127_3023972_2 Glycosyl transferase, family 2 - - - 0.0000000000002099 81.0
DYD1_k127_3023972_3 LTXXQ motif family protein - - - 0.00000203 56.0
DYD1_k127_3029873_0 Glycosyl transferases group 1 - - - 0.0000000000000000000000000000000000000000000000009258 188.0
DYD1_k127_3029873_1 PFAM Glycosyl transferase family 2 - - - 0.0000000004252 62.0
DYD1_k127_3030350_0 deoxyhypusine monooxygenase activity - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001076 376.0
DYD1_k127_3030350_2 Sigma-70 region 2 K03088 - - 0.000000000000000000000000000001095 126.0
DYD1_k127_3030350_3 AntiSigma factor - - - 0.0000000000000000000000000009294 125.0
DYD1_k127_3030350_4 extracellular solute-binding protein, family 5 K02035 - - 0.000000000000000000004181 98.0
DYD1_k127_3030350_5 chaperone-mediated protein folding - - - 0.000000000000001029 86.0
DYD1_k127_3030350_6 oligosaccharyl transferase activity - - - 0.00000000027 70.0
DYD1_k127_3045151_0 Protein kinase domain K12132 - 2.7.11.1 0.000000000000000000000000000000000000000000000000000000000000000000000000003389 273.0
DYD1_k127_3045151_1 Protein serine threonine phosphatase K20074 - 3.1.3.16 0.00000000000000000000000000000000000000000000000000000000000000002733 231.0
DYD1_k127_3045151_2 - - - - 0.000000000000000000000000002866 118.0
DYD1_k127_3045151_3 PHP domain protein K07053 - 3.1.3.97 0.00005403 47.0
DYD1_k127_3047729_0 ZIP Zinc transporter K07238,K11021,K16267 - - 0.000000000000000000000000000000000000000000000000000000000000000000009606 241.0
DYD1_k127_3047729_1 carboxylic acid catabolic process - - - 0.00000000000000000000000000000000000000000000000000000121 203.0
DYD1_k127_3047729_2 O-methyltransferase activity - - - 0.0000000000000000000000000000000000000000000000004003 181.0
DYD1_k127_3047729_3 glyoxalase III activity - - - 0.00000000000000000000000000008641 123.0
DYD1_k127_3047729_4 membrane-bound metal-dependent hydrolase K07038 - - 0.0000000000000000000003061 109.0
DYD1_k127_3047729_5 FtsX-like permease family K02004 - - 0.00000000493 62.0
DYD1_k127_3054630_0 Protein of unknown function (DUF1684) K09164 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000002405 293.0
DYD1_k127_3054630_1 PFAM thioesterase superfamily - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000005641 250.0
DYD1_k127_3054630_2 Bacterial-like globin K06886 - - 0.00000000000000000000000000000000001446 140.0
DYD1_k127_3085255_0 Belongs to the ABC transporter superfamily K02032,K10823 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007741 378.0
DYD1_k127_3085255_1 protein conserved in bacteria K09931 - - 0.000000000000000000000000000000000004354 145.0
DYD1_k127_3085255_2 TIGRFAM oligopeptide dipeptide ABC transporter, ATP-binding protein, C-terminal domain K02031,K15583 - - 0.000000000000000000000000000000137 127.0
DYD1_k127_3085255_3 Carboxypeptidase regulatory-like domain - - - 0.0000001274 64.0
DYD1_k127_3088832_0 LytTr DNA-binding domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000002194 246.0
DYD1_k127_3088832_1 Bacterial extracellular solute-binding proteins, family 5 Middle K02035,K15580 - - 0.0000000000000000000000000000000000000000000000000001855 204.0
DYD1_k127_3088832_2 histidine kinase HAMP region domain protein - - - 0.00000000000000000000000000000000000002872 156.0
DYD1_k127_3088832_3 membrane - - - 0.0000000000000000000000000000003809 128.0
DYD1_k127_3088832_4 diguanylate cyclase activity K13069 GO:0003674,GO:0003824,GO:0016740,GO:0016772,GO:0016779,GO:0052621 2.7.7.65 0.000000000000000000000000000002857 130.0
DYD1_k127_3088832_5 PFAM membrane protein of K08972 - - 0.0000000008313 66.0
DYD1_k127_3095059_0 Insulinase (Peptidase family M16) - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001755 528.0
DYD1_k127_3095059_1 VIT family - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000007565 288.0
DYD1_k127_309940_0 COG5285 Protein involved in biosynthesis of mitomycin antibiotics polyketide fumonisin - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005413 407.0
DYD1_k127_309940_1 PFAM FAD dependent oxidoreductase K00301 - 1.5.3.1 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000102 342.0
DYD1_k127_309940_2 deoxyhypusine monooxygenase activity - - - 0.0000000000000000000000000000000000000000003372 177.0
DYD1_k127_309940_3 Belongs to the glycosyl hydrolase 1 family K05350 - 3.2.1.21 0.00000000000000000000000000009128 119.0
DYD1_k127_309940_4 glycosyl hydrolase, BNR repeat-containing protein - - - 0.00000000000000000000000004594 117.0
DYD1_k127_309940_5 Toxic component of a toxin-antitoxin (TA) module. An RNase - - - 0.0000000000000000000003419 102.0
DYD1_k127_309940_6 toxin-antitoxin pair type II binding - - - 0.00000000000000002687 83.0
DYD1_k127_309940_7 prohibitin homologues - - - 0.000000000000002342 75.0
DYD1_k127_309940_8 - - - - 0.00000000002269 66.0
DYD1_k127_3100110_0 Involved in chlorophyll biosynthesis. Catalyzes the insertion of magnesium ion into protoporphyrin IX to yield Mg- protoporphyrin IX K03405 - 6.6.1.1 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004622 587.0
DYD1_k127_3100110_1 Catalyzes the NADPH-dependent reduction of ketopantoate into pantoic acid K00077 - 1.1.1.169 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005179 372.0
DYD1_k127_3100110_2 von Willebrand factor (vWF) type A domain K07114 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002962 314.0
DYD1_k127_3109881_0 Catalyzes the irreversible transfer of a propylamine group from the amino donor S-adenosylmethioninamine (decarboxy- AdoMet) to putrescine (1,4-diaminobutane) to yield spermidine - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008128 331.0
DYD1_k127_3109881_1 Repeats in polycystic kidney disease 1 (PKD1) and other proteins - - - 0.0000000000000000000000001962 120.0
DYD1_k127_3112987_0 Haloacid dehalogenase-like hydrolase K07025 - - 0.000000000000000000000000000000000000000000168 164.0
DYD1_k127_3112987_1 Catalyzes the two-step NADP-dependent conversion of GDP- 4-dehydro-6-deoxy-D-mannose to GDP-fucose, involving an epimerase and a reductase reaction K02377 - 1.1.1.271 0.00000000000000000000000005918 111.0
DYD1_k127_3112987_2 Bacterial regulatory proteins, crp family K10914 - - 0.00000000000005115 79.0
DYD1_k127_3129142_0 Dehydrogenase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001288 378.0
DYD1_k127_3129142_1 Amino acid permease - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006645 385.0
DYD1_k127_3129142_2 Bacterial transferase hexapeptide (six repeats) - - - 0.00000000000000000000000000000000002258 138.0
DYD1_k127_3129142_3 Glutamine synthetase, catalytic domain K01915 - 6.3.1.2 0.00000000000000000000001213 103.0
DYD1_k127_3129247_0 Heat shock 70 kDa protein K04043 - - 1.347e-219 696.0
DYD1_k127_3129247_1 ATP binding to DnaK triggers the release of the substrate protein, thus completing the reaction cycle. Several rounds of ATP-dependent interactions between DnaJ, DnaK and GrpE are required for fully efficient folding. Also involved, together with DnaK and GrpE, in the DNA replication of plasmids through activation of initiation proteins K03686 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003132 378.0
DYD1_k127_3138765_0 Involved in targeting and insertion of nascent membrane proteins into the cytoplasmic membrane. Acts as a receptor for the complex formed by the signal recognition particle (SRP) and the ribosome-nascent chain (RNC) K03110 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001351 331.0
DYD1_k127_3138765_1 HD domain - - - 0.00000000000000000000000000000000000000000000000000000000000003474 218.0
DYD1_k127_3138765_2 Tetratricopeptide repeat - - - 0.00000000575 67.0
DYD1_k127_3143140_0 LytTr DNA-binding domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000004872 248.0
DYD1_k127_3143140_1 Putative zinc-finger - - - 0.0002146 49.0
DYD1_k127_315119_0 adenylosuccinate lyase K01756 - 4.3.2.2 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000088 437.0
DYD1_k127_315119_1 Involved in protein export. Acts as a chaperone by maintaining the newly synthesized protein in an open conformation. Functions as a peptidyl-prolyl cis-trans isomerase K03545 GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0044424,GO:0044464 - 0.00000000000000000000000000000000000000000000000000000000000000000000001924 258.0
DYD1_k127_3178160_0 Tetratricopeptide repeat - - - 0.000000000000000000000000000000000000000000000000000003959 213.0
DYD1_k127_3178160_1 Polysaccharide deacetylase - - - 0.0006968 44.0
DYD1_k127_319641_0 Two component, sigma54 specific, transcriptional regulator, Fis family - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001951 405.0
DYD1_k127_3212130_0 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). K13487 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005645 332.0
DYD1_k127_3212130_1 PFAM CheW domain protein K13488 - - 0.0000000000000002271 83.0
DYD1_k127_3213946_0 Alpha/beta hydrolase family K07020 - - 0.000000000000000000000000000000000000000000007548 170.0
DYD1_k127_3213946_1 TIGRFAM Diguanylate cyclase - - - 0.000000000000000000000000000001363 133.0
DYD1_k127_322377_0 Catalyzes the condensation of iminoaspartate with dihydroxyacetone phosphate to form quinolinate K03517 GO:0003674,GO:0003824,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006082,GO:0006139,GO:0006520,GO:0006531,GO:0006725,GO:0006732,GO:0006733,GO:0006753,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0008987,GO:0009058,GO:0009066,GO:0009108,GO:0009117,GO:0009165,GO:0009435,GO:0009987,GO:0016053,GO:0017144,GO:0018130,GO:0019355,GO:0019359,GO:0019362,GO:0019363,GO:0019438,GO:0019637,GO:0019674,GO:0019752,GO:0019805,GO:0034627,GO:0034628,GO:0034641,GO:0034654,GO:0043436,GO:0043648,GO:0043650,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0044283,GO:0044424,GO:0044444,GO:0044464,GO:0046394,GO:0046483,GO:0046496,GO:0046874,GO:0048037,GO:0051186,GO:0051188,GO:0051536,GO:0051539,GO:0051540,GO:0055086,GO:0071704,GO:0072524,GO:0072525,GO:0090407,GO:1901293,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576,GO:1901605 2.5.1.72 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000395 465.0
DYD1_k127_322377_1 PFAM asparagine synthase K01953 - 6.3.5.4 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001936 460.0
DYD1_k127_322377_3 transmembrane signaling receptor activity K00694,K03406,K07315 - 2.4.1.12,3.1.3.3 0.00000009774 59.0
DYD1_k127_3224081_0 translation release factor activity K03265 GO:0001666,GO:0005575,GO:0005618,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005886,GO:0006950,GO:0008150,GO:0009628,GO:0016020,GO:0030312,GO:0036293,GO:0044424,GO:0044444,GO:0044464,GO:0050896,GO:0070482,GO:0071944 - 0.000000000000000000000000000000000000000000000000003517 196.0
DYD1_k127_3224081_1 Catalyzes the ATP-dependent phosphorylation of L- homoserine to L-homoserine phosphate K00872 GO:0000096,GO:0000097,GO:0003674,GO:0003824,GO:0004413,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006082,GO:0006520,GO:0006555,GO:0006566,GO:0006790,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0008652,GO:0009058,GO:0009066,GO:0009067,GO:0009069,GO:0009086,GO:0009088,GO:0009092,GO:0009987,GO:0016053,GO:0016301,GO:0016310,GO:0016740,GO:0016772,GO:0016773,GO:0019202,GO:0019752,GO:0043436,GO:0044237,GO:0044238,GO:0044249,GO:0044272,GO:0044281,GO:0044283,GO:0044424,GO:0044444,GO:0044464,GO:0046394,GO:0071704,GO:1901564,GO:1901566,GO:1901576,GO:1901605,GO:1901607 2.7.1.39 0.0000000000000000000000000000000000000000000003269 179.0
DYD1_k127_3224081_2 PFAM CutA1 divalent ion tolerance protein K03926 - - 0.00000000000000000000000002484 111.0
DYD1_k127_3224081_3 PFAM EamA-like transporter family - - - 0.000000000000000000000004653 110.0
DYD1_k127_3224081_4 - - - - 0.00004603 54.0
DYD1_k127_3239678_0 Histidine kinase - - - 0.00000000000000000000000000000000000000000000000000000000000001028 235.0
DYD1_k127_3240079_0 Attaches a formyl group to the free amino group of methionyl-tRNA(fMet). The formyl group appears to play a dual role in the initiator identity of N-formylmethionyl-tRNA by promoting its recognition by IF2 and preventing the misappropriation of this tRNA by the elongation apparatus K00604 GO:0003674,GO:0003824,GO:0004479,GO:0006139,GO:0006396,GO:0006399,GO:0006400,GO:0006412,GO:0006413,GO:0006464,GO:0006518,GO:0006725,GO:0006807,GO:0008033,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009451,GO:0009987,GO:0010467,GO:0016070,GO:0016740,GO:0016741,GO:0016742,GO:0019538,GO:0019988,GO:0034470,GO:0034641,GO:0034645,GO:0034660,GO:0036211,GO:0043043,GO:0043170,GO:0043412,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0046483,GO:0071704,GO:0071951,GO:0090304,GO:0140098,GO:0140101,GO:1901360,GO:1901564,GO:1901566,GO:1901576 2.1.2.9 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000001518 290.0
DYD1_k127_3240079_1 Catalyzes the ATP-dependent conversion of 7-carboxy-7- deazaguanine (CDG) to 7-cyano-7-deazaguanine (preQ(0)) K06920 - 6.3.4.20 0.000000000000000000000000000000000000000000000000000000000000000000000000003174 258.0
DYD1_k127_3240079_2 Domain of unknown function (DUF4921) K00965 - 2.7.7.12 0.00000000000000000000000000000000000000339 154.0
DYD1_k127_3240079_3 Tetratricopeptide repeat - - - 0.0000000000000000000000000000004535 133.0
DYD1_k127_3240079_4 Cyclic nucleotide-monophosphate binding domain K04739 - - 0.00000000000000000000000002484 119.0
DYD1_k127_3240079_5 cell redox homeostasis K03671 - - 0.000000000000009257 81.0
DYD1_k127_3245574_0 Flavin containing amine oxidoreductase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001036 573.0
DYD1_k127_3245574_1 Flavin containing amine oxidoreductase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005917 521.0
DYD1_k127_3245574_2 3-demethylubiquinone-9 3-O-methyltransferase activity - - - 0.000000001053 61.0
DYD1_k127_3254823_0 ribosomal L5P family C-terminus K02931 GO:0000027,GO:0003674,GO:0003676,GO:0003723,GO:0003735,GO:0005198,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0006412,GO:0006518,GO:0006807,GO:0006996,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0015934,GO:0016043,GO:0019538,GO:0022607,GO:0022613,GO:0022618,GO:0022625,GO:0022626,GO:0032991,GO:0034622,GO:0034641,GO:0034645,GO:0042254,GO:0042255,GO:0042273,GO:0043043,GO:0043170,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043603,GO:0043604,GO:0043933,GO:0044085,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:0065003,GO:0070925,GO:0071704,GO:0071826,GO:0071840,GO:0097159,GO:1901363,GO:1901564,GO:1901566,GO:1901576,GO:1990904 - 0.0000000000000000000000000000000000000000000000000000000000000000000000003197 252.0
DYD1_k127_3254823_1 Binds the lower part of the 30S subunit head. Binds mRNA in the 70S ribosome, positioning it for translation K02982 GO:0000028,GO:0002181,GO:0003674,GO:0003735,GO:0005198,GO:0005575,GO:0005618,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0005886,GO:0006412,GO:0006518,GO:0006807,GO:0006996,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0015935,GO:0016020,GO:0016043,GO:0019538,GO:0022607,GO:0022613,GO:0022618,GO:0022626,GO:0022627,GO:0030312,GO:0032991,GO:0034622,GO:0034641,GO:0034645,GO:0040007,GO:0042254,GO:0042255,GO:0042274,GO:0043043,GO:0043170,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043603,GO:0043604,GO:0043933,GO:0044085,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:0065003,GO:0070925,GO:0071704,GO:0071826,GO:0071840,GO:0071944,GO:1901564,GO:1901566,GO:1901576,GO:1990904 - 0.000000000000000000000000000000000000000000000000000000000000000001261 231.0
DYD1_k127_3254823_2 Binds 23S rRNA and is also seen to make contacts with the A and possibly P site tRNAs K02878 - - 0.0000000000000000000000000000000000000000000000000000000000002605 213.0
DYD1_k127_3254823_3 Binds to 23S rRNA. Forms part of two intersubunit bridges in the 70S ribosome K02874 - - 0.000000000000000000000000000000000000000000000000000005906 191.0
DYD1_k127_3254823_4 One of the proteins that surrounds the polypeptide exit tunnel on the outside of the subunit K02895 - - 0.000000000000000000000000000323 117.0
DYD1_k127_3254823_5 One of the primary rRNA binding proteins, it binds specifically to the 5'-end of 16S ribosomal RNA K02961 - - 0.000000000000000000000001205 105.0
DYD1_k127_3254823_6 Binds 16S rRNA, required for the assembly of 30S particles and may also be responsible for determining the conformation of the 16S rRNA at the A site K02954 GO:0003674,GO:0003735,GO:0005198,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005840,GO:0006412,GO:0006518,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0015935,GO:0019538,GO:0032991,GO:0034641,GO:0034645,GO:0043043,GO:0043170,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044446,GO:0044464,GO:0071704,GO:1901564,GO:1901566,GO:1901576,GO:1990904 - 0.000000000000000005968 85.0
DYD1_k127_3254823_7 Belongs to the universal ribosomal protein uL29 family K02904 - - 0.000000000005569 68.0
DYD1_k127_3256239_0 TLC ATP/ADP transporter - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002305 395.0
DYD1_k127_3256239_1 Protein conserved in bacteria - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001184 378.0
DYD1_k127_3256239_2 mechanosensitive ion channel - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003828 366.0
DYD1_k127_3256239_3 Belongs to the D-alanine--D-alanine ligase family K01921 - 6.3.2.4 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001776 358.0
DYD1_k127_3256239_4 Belongs to the transketolase family K00615 - 2.2.1.1 0.000000001132 60.0
DYD1_k127_3256239_5 PFAM alpha amylase catalytic region K05343 - 3.2.1.1,5.4.99.16 0.000000001334 58.0
DYD1_k127_3256239_6 PFAM PRC-barrel domain protein - - - 0.000000006531 65.0
DYD1_k127_3256773_0 Catalyzes the transfer of a two-carbon ketol group from a ketose donor to an aldose acceptor, via a covalent intermediate with the cofactor thiamine pyrophosphate K00615 - 2.2.1.1 1.327e-314 975.0
DYD1_k127_3256773_1 ROK family K00886 - 2.7.1.63 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000001588 292.0
DYD1_k127_3256773_2 Ribose/Galactose Isomerase K01808 - 5.3.1.6 0.000000000000000000000000000000000000000000000000000000000771 204.0
DYD1_k127_3256773_3 ATPase involved in DNA repair K03546 - - 0.000000000000000000000000000000000000000000000000000001136 219.0
DYD1_k127_3256773_4 DNA-templated transcription, initiation K03088 - - 0.0000000000000000000000000000000000000000000000000002805 194.0
DYD1_k127_3256773_5 PFAM Protein kinase domain K12132 - 2.7.11.1 0.00000000000000000000000000000000000000000000004429 177.0
DYD1_k127_3256773_6 PFAM glucosamine galactosamine-6-phosphate isomerase K01057 - 3.1.1.31 0.00000000000000000000000000000005581 130.0
DYD1_k127_3258185_0 Glycosyltransferase family 28 N-terminal domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002034 434.0
DYD1_k127_3258185_1 Phosphate acyltransferases - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007104 356.0
DYD1_k127_3258185_2 Belongs to the peptidase M16 family K07263 - - 0.000000000000000000000000000008648 120.0
DYD1_k127_3258185_3 Belongs to the TPP enzyme family K01652 - 2.2.1.6 0.0000000000000001959 81.0
DYD1_k127_3258185_4 MacB-like periplasmic core domain - - - 0.0000004084 53.0
DYD1_k127_3261756_0 PFAM Hemolysin-type calcium-binding repeat (2 copies) - - - 0.00000000000000000000000000000000000000000103 169.0
DYD1_k127_3261756_1 efflux transmembrane transporter activity K15725 - - 0.00003617 53.0
DYD1_k127_3267139_0 Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family K03296 - - 3.035e-209 687.0
DYD1_k127_3267139_1 Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family K03296 - - 0.00000000000000000000107 97.0
DYD1_k127_3269650_0 Catalyzes the 2'-O-methylation of the ribose of cytidine 1402 (C1402) in 16S rRNA K07056 - 2.1.1.198 0.00000000000000000000000000000000000000000000000000000000000000000005435 240.0
DYD1_k127_3269650_1 - Catabolite gene activator and regulatory subunit of cAMP-dependent protein K06883 GO:0008150,GO:0032879,GO:0032880,GO:0050789,GO:0065007 - 0.000000000000000000000000000000000000000000000000000000000000001936 233.0
DYD1_k127_3274887_0 Oxidoreductase required for the transfer of electrons from pyruvate to flavodoxin K03737 - 1.2.7.1 2.633e-213 670.0
DYD1_k127_3274887_1 Catalyzes the condensation reaction of fatty acid synthesis by the addition to an acyl acceptor of two carbons from malonyl-ACP K09458 - 2.3.1.179 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006392 588.0
DYD1_k127_3274887_2 electron transfer flavoprotein, alpha subunit K03522,K22432 - 1.3.1.108 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000008901 300.0
DYD1_k127_3274887_3 Electron transfer flavoprotein K03521 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000146 253.0
DYD1_k127_3274887_4 CBS domain - - - 0.00000000000000000000000001428 114.0
DYD1_k127_3275766_0 Serine threonine protein kinase K12132 - 2.7.11.1 0.000000000000000000000000000000000000000000000000000000002095 230.0
DYD1_k127_3275766_1 Protein kinase domain K12132 - 2.7.11.1 0.0000000000000000000000000000000000000000000000005657 202.0
DYD1_k127_3275766_2 Peptidase C13 family - - - 0.00007648 55.0
DYD1_k127_3283914_0 Belongs to the NAD(P)-dependent epimerase dehydratase family K01784 - 5.1.3.2 0.0000000000000000000000000000000000000006406 151.0
DYD1_k127_3283914_1 domain, Protein - - - 0.00000000000000000008307 89.0
DYD1_k127_3299934_0 Metallo-beta-lactamase superfamily - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000001656 261.0
DYD1_k127_3299934_1 Domain of unknown function (DUF2383) - - - 0.000000000000000000000000000000000004461 141.0
DYD1_k127_3299934_2 PFAM metallophosphoesterase K07098 - - 0.0000000000000000000000000004203 113.0
DYD1_k127_3301180_0 Tetratricopeptide repeat - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004388 396.0
DYD1_k127_3301529_0 Polyprenyl synthetase K13789 - 2.5.1.1,2.5.1.10,2.5.1.29 0.0000000000000000000000000000000000000000000000000000000000000002585 230.0
DYD1_k127_3301529_1 Catalyzes the decarboxylation of orotidine 5'- monophosphate (OMP) to uridine 5'-monophosphate (UMP) K01591 GO:0003674,GO:0003824,GO:0004590,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006139,GO:0006206,GO:0006207,GO:0006220,GO:0006221,GO:0006725,GO:0006753,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009112,GO:0009117,GO:0009165,GO:0009218,GO:0009220,GO:0009259,GO:0009260,GO:0009987,GO:0015949,GO:0016829,GO:0016830,GO:0016831,GO:0018130,GO:0019438,GO:0019637,GO:0019693,GO:0019856,GO:0034641,GO:0034654,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0044424,GO:0044444,GO:0044464,GO:0046112,GO:0046390,GO:0046483,GO:0055086,GO:0071704,GO:0072527,GO:0072528,GO:0090407,GO:1901135,GO:1901137,GO:1901293,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576 4.1.1.23 0.000000000000000000000000000000000000000000000000000003904 198.0
DYD1_k127_3301529_2 Acyl-transferase K00655 - 2.3.1.51 0.0000000000000000000000000000000000000002118 158.0
DYD1_k127_3301529_3 Thioredoxin domain - - - 0.0000000000000000000000000000000004583 135.0
DYD1_k127_3301529_4 - - - - 0.00000000000000000000007297 105.0
DYD1_k127_3301529_5 TIGRFAM glutaredoxin-like domain protein - - - 0.000000000000000004696 85.0
DYD1_k127_3312593_0 Phosphoesterase, PA-phosphatase related protein - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000002863 290.0
DYD1_k127_3312593_1 competence protein - - - 0.000000000000000000000000000000000153 143.0
DYD1_k127_3312593_2 Tetratricopeptide repeat - - - 0.0000000000000000000000009693 118.0
DYD1_k127_3312593_3 Prokaryotic dksA/traR C4-type zinc finger K06204 - - 0.000000000000000000000003024 106.0
DYD1_k127_3322562_0 NADH dehydrogenase, FAD-containing subunit K03885 - 1.6.99.3 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004995 541.0
DYD1_k127_3322562_1 Serine aminopeptidase, S33 K06889 - - 0.000000000000000000000001321 114.0
DYD1_k127_3323357_0 Polyphosphate kinase 2 (PPK2) - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008425 465.0
DYD1_k127_3323357_1 Protein of unknown function (DUF3179) - - - 0.00000000000000000000000000000000000000000000004087 177.0
DYD1_k127_3323357_2 Protein of unknown function (DUF3179) - - - 0.000000000000000000000000000000002488 139.0
DYD1_k127_3328493_0 histidine kinase HAMP region domain protein K13598 - 2.7.13.3 0.00000000000000000000000000000000000000000000000000000000000000000001183 260.0
DYD1_k127_3328493_1 Zinc-binding dehydrogenase K00344 - 1.6.5.5 0.0000000000000000000000000000000000000000000003939 169.0
DYD1_k127_333951_0 PFAM Alcohol dehydrogenase zinc-binding domain protein - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000001039 266.0
DYD1_k127_333951_1 - - - - 0.000000000000000001649 90.0
DYD1_k127_3368151_0 PFAM MCP methyltransferase, CheR-type K00575 - 2.1.1.80 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001246 426.0
DYD1_k127_3368151_1 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). K03406 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002331 391.0
DYD1_k127_3368151_2 ATP-binding region, ATPase domain protein K03407 - 2.7.13.3 0.00000000000000000000000000000000000000000000000000000000000000000000002204 254.0
DYD1_k127_3368151_3 Two component signalling adaptor domain K03408 - - 0.0000000000000000000000000000000000000000000000000000000000000007003 226.0
DYD1_k127_3368151_4 Two component signalling adaptor domain K03408 - - 0.0000000000000000000000000000000000000000005517 162.0
DYD1_k127_3420882_0 MacB-like periplasmic core domain K02004 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009 373.0
DYD1_k127_3420882_1 ABC transporter K02003 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000004292 287.0
DYD1_k127_3420882_2 GMC oxidoreductase - - - 0.0000000000000000000000000000009527 123.0
DYD1_k127_3420882_3 Tetratricopeptide repeat - - - 0.0002583 54.0
DYD1_k127_3421098_0 lysine 2,3-aminomutase K01843 - 5.4.3.2 8.122e-232 725.0
DYD1_k127_3421098_1 ATPase domain of DNA mismatch repair MUTS family - - - 0.00000000000000000000000000000000000000000000001278 173.0
DYD1_k127_3433126_0 metallopeptidase activity - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003932 346.0
DYD1_k127_3433126_1 LmbE family - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000004161 255.0
DYD1_k127_3433126_2 DeoC/LacD family aldolase K08321 - 2.3.1.245 0.00000000000000000000000000000000000000000000000000001178 191.0
DYD1_k127_3433126_3 Catalyzes the reversible isomerization-deamination of glucosamine 6-phosphate (GlcN6P) to form fructose 6-phosphate (Fru6P) and ammonium ion K02564 - 3.5.99.6 0.00000000000000000000000000002271 118.0
DYD1_k127_3440603_0 Small MutS-related domain K07456 GO:0003674,GO:0003676,GO:0003677,GO:0003684,GO:0003690,GO:0003824,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0006139,GO:0006259,GO:0006281,GO:0006298,GO:0006725,GO:0006807,GO:0006950,GO:0006974,GO:0008094,GO:0008150,GO:0008152,GO:0009987,GO:0016462,GO:0016787,GO:0016817,GO:0016818,GO:0016887,GO:0017111,GO:0030983,GO:0032300,GO:0032991,GO:0033554,GO:0034641,GO:0042623,GO:0043170,GO:0044237,GO:0044238,GO:0044260,GO:0044424,GO:0044464,GO:0046483,GO:0050896,GO:0051716,GO:0071704,GO:0090304,GO:0097159,GO:1901360,GO:1901363,GO:1990391 - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002406 419.0
DYD1_k127_3440603_1 AIR carboxylase K06898 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000001551 275.0
DYD1_k127_3440603_2 RNA polymerase that catalyzes the synthesis of short RNA molecules used as primers for DNA polymerase during DNA replication K02316 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000002961 261.0
DYD1_k127_3440603_3 Belongs to the ClpA ClpB family K03696 - - 0.0000000000000000000000000000000000000000000000000000000000000000001227 236.0
DYD1_k127_3446347_0 Beta-lactamase superfamily domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006121 406.0
DYD1_k127_3446347_1 TIGRFAM RND efflux system, outer membrane lipoprotein, NodT - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001962 380.0
DYD1_k127_3446347_2 Transcriptional regulator, MarR family - - - 0.0000144 53.0
DYD1_k127_3453571_0 ABC transporter K02003 - - 0.0000000000000000000000000000000000000000000000000000000000000000000002021 246.0
DYD1_k127_3453571_1 - - - - 0.0000000000000000000000000000000000000000000000000000000000000008238 237.0
DYD1_k127_3453571_2 MacB-like periplasmic core domain K02004 - - 0.000000000000000000000000000000000000000000000007132 185.0
DYD1_k127_3453571_3 Domain in cystathionine beta-synthase and other proteins. - - - 0.00000000002734 65.0
DYD1_k127_3464079_0 Cytochrome c3 - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000003963 272.0
DYD1_k127_3464079_1 MacB-like periplasmic core domain - - - 0.000000000000000000000000000000000000000000000000000000000003782 218.0
DYD1_k127_3464079_2 Putative outer membrane beta-barrel porin, MtrB/PioB K22110 - - 0.000000000000000000000000000000000000000000000006945 196.0
DYD1_k127_3481178_0 Required for accurate and efficient protein synthesis under certain stress conditions. May act as a fidelity factor of the translation reaction, by catalyzing a one-codon backward translocation of tRNAs on improperly translocated ribosomes. Back- translocation proceeds from a post-translocation (POST) complex to a pre-translocation (PRE) complex, thus giving elongation factor G a second chance to translocate the tRNAs correctly. Binds to ribosomes in a GTP-dependent manner K03596 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001902 537.0
DYD1_k127_3481178_1 glycosyl transferase family 2 K20444 - - 0.000000000000000007413 94.0
DYD1_k127_3481178_2 Peptidase M56 - - - 0.0000000000000002503 92.0
DYD1_k127_348377_0 Transporter associated domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003205 342.0
DYD1_k127_348377_1 Protein of unknown function (DUF418) K07148 - - 0.00000000000000000000000000007355 124.0
DYD1_k127_3484564_0 Part of the phosphoribosylformylglycinamidine synthase complex involved in the purines biosynthetic pathway. Catalyzes the ATP-dependent conversion of formylglycinamide ribonucleotide (FGAR) and glutamine to yield formylglycinamidine ribonucleotide (FGAM) and glutamate. The FGAM synthase complex is composed of three subunits. PurQ produces an ammonia molecule by converting glutamine to glutamate. PurL transfers the ammonia molecule to FGAR to form FGAM in an ATP-dependent manner. PurS interacts with PurQ and PurL and is thought to assist in the transfer of the ammonia molecule from PurQ to PurL K01952 - 6.3.5.3 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002049 501.0
DYD1_k127_3484564_1 Converts seryl-tRNA(Sec) to selenocysteinyl-tRNA(Sec) required for selenoprotein biosynthesis K01042,K17468 - 2.9.1.1,4.3.1.29 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009831 404.0
DYD1_k127_3487628_0 DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates K03043 - 2.7.7.6 2.323e-233 736.0
DYD1_k127_3487628_1 DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates K03043 - 2.7.7.6 0.0000000000000000000000000000000000000000000000000000005757 195.0
DYD1_k127_3487628_2 Asparagine synthase, glutamine-hydrolyzing K01953 - 6.3.5.4 0.0000000000000000000000001181 107.0
DYD1_k127_3488491_0 cyclic 2,3-diphosphoglycerate synthetase activity - - - 0.0000000000000000000000000000000000000000000000000000001374 197.0
DYD1_k127_3488491_1 Family 5 K02035,K15580 - - 0.00000000000000000000000000000000000000000000001819 190.0
DYD1_k127_3488491_2 hydrolase of the alpha beta K07018 - - 0.0000000000000000000000000000000000000001493 158.0
DYD1_k127_3488491_3 PPIases accelerate the folding of proteins. It catalyzes the cis-trans isomerization of proline imidic peptide bonds in oligopeptides - - - 0.0009065 44.0
DYD1_k127_3489228_0 Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family K02005 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008574 450.0
DYD1_k127_3489228_1 ABC transporter K02003 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004784 388.0
DYD1_k127_3489228_2 Peptidase M36 - - - 0.00000000000000000031 100.0
DYD1_k127_3490098_0 long-chain fatty acid transporting porin activity K06076 - - 0.0000000000000000000000000000000000000000000000000000000000000000911 238.0
DYD1_k127_3490098_1 protein conserved in cyanobacteria - - - 0.00000000000000000000000000000000257 137.0
DYD1_k127_3490098_2 Amidohydrolase family K06015 - 3.5.1.81 0.00000000009045 63.0
DYD1_k127_3490098_3 long-chain fatty acid transporting porin activity K06076 - - 0.000002322 53.0
DYD1_k127_3490620_0 carboxylic ester hydrolase activity - - - 0.00000000000000000000000000000006183 141.0
DYD1_k127_3490620_1 Histidine kinase - - - 0.0000000001514 63.0
DYD1_k127_3490620_2 - - - - 0.00000112 60.0
DYD1_k127_3491_0 Protein of unknown function DUF111 K06898,K09121 - 4.99.1.12 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000002248 300.0
DYD1_k127_3491_1 modulates the activities of several proteins which are inactive in their K12410 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000006127 264.0
DYD1_k127_3491_2 PFAM Serine threonine-protein kinase-like domain K12132 - 2.7.11.1 0.00000000000000000000000000000000000000000000000000000000000000000000001926 251.0
DYD1_k127_3491_3 protein (some members contain a von Willebrand factor type A (vWA) domain - - - 0.0000000002266 64.0
DYD1_k127_3512475_1 radical SAM domain protein - - - 0.0000000000000000009718 100.0
DYD1_k127_3512475_2 PFAM Radical SAM domain protein K22227 - - 0.00000000000000009718 83.0
DYD1_k127_3513264_0 Involved in the tonB-independent uptake of proteins - - - 3.001e-225 725.0
DYD1_k127_3513264_1 type I phosphodiesterase nucleotide pyrophosphatase - GO:0003674,GO:0003824,GO:0004035,GO:0004346,GO:0005488,GO:0005575,GO:0005623,GO:0006793,GO:0006796,GO:0008150,GO:0008152,GO:0008270,GO:0008877,GO:0009987,GO:0016311,GO:0016787,GO:0016788,GO:0016791,GO:0019203,GO:0042578,GO:0042597,GO:0043167,GO:0043169,GO:0044237,GO:0044464,GO:0046872,GO:0046914,GO:0050308,GO:0050309,GO:0098519 - 0.000000000000000000000000000000000000000000000000000000000000000000000000001002 277.0
DYD1_k127_3513264_2 Dolichyl-phosphate-mannose-protein mannosyltransferase - - - 0.000000000000000000000000000006732 136.0
DYD1_k127_3513264_3 Amidohydrolase - - - 0.000000000000000003943 90.0
DYD1_k127_3517174_0 - - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000003569 285.0
DYD1_k127_3517174_1 Peptidase M14, carboxypeptidase A - - - 0.0000000000000000000000000000000000000000000000000000000000000001082 232.0
DYD1_k127_3517174_2 Adenosine/AMP deaminase K01488 - 3.5.4.4 0.0000000000000000000000000000000000007298 151.0
DYD1_k127_3518243_0 lysine decarboxylase K06966 - 3.2.2.10 0.000000000000000000000000000000000000000000000000000000000654 210.0
DYD1_k127_3529903_0 Oxidoreductase required for the transfer of electrons from pyruvate to flavodoxin K00174 GO:0003674,GO:0003824,GO:0005575,GO:0005618,GO:0005623,GO:0005886,GO:0006950,GO:0006979,GO:0008150,GO:0008152,GO:0016020,GO:0016491,GO:0030312,GO:0044464,GO:0050896,GO:0055114,GO:0071944 1.2.7.11,1.2.7.3 9.076e-255 799.0
DYD1_k127_3529903_1 COG1013 Pyruvate ferredoxin oxidoreductase and related 2-oxoacid ferredoxin K00175 - 1.2.7.11,1.2.7.3 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006467 469.0
DYD1_k127_3529903_2 Belongs to the UPF0312 family - - - 0.000000000000000000000000000001266 128.0
DYD1_k127_3529903_3 Domain in cystathionine beta-synthase and other proteins. - - - 0.000000000000000000007119 98.0
DYD1_k127_3529903_4 Domain in cystathionine beta-synthase and other proteins. - - - 0.000000000000000000417 91.0
DYD1_k127_3548786_0 Short chain fatty acid transporter K02106 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000021 473.0
DYD1_k127_3548786_1 SNARE associated Golgi protein K03975 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000196 314.0
DYD1_k127_3548786_2 PFAM ABC transporter related K01996 - - 0.000000000000000000000000000000000000000414 150.0
DYD1_k127_3554512_0 N2-acetyl-L-ornithine:2-oxoglutarate 5-aminotransferase activity K00819,K00821 GO:0003674,GO:0003824,GO:0004587,GO:0005488,GO:0005515,GO:0006082,GO:0006520,GO:0006525,GO:0006527,GO:0006807,GO:0008144,GO:0008150,GO:0008152,GO:0008483,GO:0009056,GO:0009063,GO:0009064,GO:0009065,GO:0009987,GO:0016054,GO:0016740,GO:0016769,GO:0019752,GO:0019842,GO:0030170,GO:0036094,GO:0042802,GO:0043167,GO:0043168,GO:0043436,GO:0044237,GO:0044238,GO:0044248,GO:0044281,GO:0044282,GO:0046395,GO:0048037,GO:0050662,GO:0070279,GO:0071704,GO:0097159,GO:1901363,GO:1901564,GO:1901565,GO:1901575,GO:1901605,GO:1901606 2.6.1.11,2.6.1.13,2.6.1.17 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006697 443.0
DYD1_k127_3554512_1 Histidine kinase K02668,K07708 - 2.7.13.3 0.00000000000000000000000000000000000000000000000000000000000007854 235.0
DYD1_k127_3554512_2 PFAM Aldose 1-epimerase K01785 - 5.1.3.3 0.0000000000000000000000000000000000000000000000001102 189.0
DYD1_k127_3554512_3 EamA-like transporter family - - - 0.0000000000000000000000000000000000000000001855 172.0
DYD1_k127_3554512_4 GYD domain - - - 0.000000000000000000000000000000009968 129.0
DYD1_k127_3569651_0 Cyclic nucleotide-monophosphate binding domain - - - 0.000000000000000000000000000000000000000000000000000001685 207.0
DYD1_k127_3569651_1 Cyclic nucleotide-monophosphate binding domain - - - 0.00000000000000000000001505 105.0
DYD1_k127_3569651_2 MacB-like periplasmic core domain K02004 - - 0.0000000000000000000007014 101.0
DYD1_k127_3569651_3 Iron-containing redox enzyme - - - 0.00000000000000004075 91.0
DYD1_k127_3569974_0 Fumarate reductase flavoprotein C-term K00239 - 1.3.5.1,1.3.5.4 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001563 598.0
DYD1_k127_3569974_1 2Fe-2S iron-sulfur cluster binding domain K00240 - 1.3.5.1,1.3.5.4 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004151 421.0
DYD1_k127_3569974_2 - - - - 0.000000000000000000000000000000000000000001761 160.0
DYD1_k127_3579909_0 2Fe-2S iron-sulfur cluster binding domain K04755 - - 0.00000000000000000000000000000000000000000000003426 175.0
DYD1_k127_3579909_1 Mycothiol maleylpyruvate isomerase N-terminal domain - - - 0.000000000000000000000000000000000000000000001557 166.0
DYD1_k127_3579909_2 Pterin 4 alpha carbinolamine dehydratase K01724 - 4.2.1.96 0.00000000000000000000000000000000000000000000578 165.0
DYD1_k127_3579909_3 - - - - 0.0000000000000000000000000000000000000006847 154.0
DYD1_k127_3579909_4 - - - - 0.0000000004444 65.0
DYD1_k127_3579909_5 PBS lyase - - - 0.0004205 53.0
DYD1_k127_3582866_0 Pyruvate phosphate dikinase, PEP/pyruvate binding domain K01007 - 2.7.9.2 2.197e-308 970.0
DYD1_k127_3582866_1 glutamate dehydrogenase [NAD(P)+] activity K00260,K00261,K00262 GO:0003674,GO:0003824,GO:0004352,GO:0004353,GO:0004354,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006082,GO:0006520,GO:0006536,GO:0006537,GO:0006807,GO:0008150,GO:0008152,GO:0008652,GO:0009058,GO:0009064,GO:0009084,GO:0009987,GO:0016053,GO:0016491,GO:0016638,GO:0016639,GO:0019752,GO:0043436,GO:0043648,GO:0043650,GO:0044237,GO:0044238,GO:0044249,GO:0044281,GO:0044283,GO:0044424,GO:0044464,GO:0046394,GO:0055114,GO:0071704,GO:1901564,GO:1901566,GO:1901576,GO:1901605,GO:1901607 1.4.1.2,1.4.1.3,1.4.1.4 2.676e-218 683.0
DYD1_k127_3582866_2 Pyruvate phosphate dikinase, PEP/pyruvate binding domain K01007 - 2.7.9.2 4.501e-203 646.0
DYD1_k127_3582866_3 Nucleotidyltransferase domain - - - 0.000000006253 60.0
DYD1_k127_358426_0 Gamma-glutamyltranspeptidase K00681 - 2.3.2.2,3.4.19.13 3.481e-305 946.0
DYD1_k127_358426_1 PFAM glycosyl transferase group 1 - - - 0.0000000000000000000000000000000000006755 155.0
DYD1_k127_358426_2 Bacterial regulatory protein, Fis family K07712 - - 0.000000000000000000000002556 110.0
DYD1_k127_358426_3 Regulatory protein, FmdB family - - - 0.0000000000000000005903 91.0
DYD1_k127_358426_4 Glycosyl transferases group 1 - - - 0.0000000000000001265 91.0
DYD1_k127_361603_0 Specifically catalyzes the cleavage of the D-lactyl ether substituent of MurNAc 6-phosphate, producing GlcNAc 6- phosphate and D-lactate - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002199 576.0
DYD1_k127_361603_1 Catalyzes the reversible isomerization-deamination of glucosamine 6-phosphate (GlcN6P) to form fructose 6-phosphate (Fru6P) and ammonium ion K02564 GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0044424,GO:0044444,GO:0044464 3.5.99.6 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000056 279.0
DYD1_k127_361603_2 LmbE family - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000001708 269.0
DYD1_k127_361603_3 Nitroreductase family - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000003253 267.0
DYD1_k127_361603_4 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase - - - 0.000000000000000000000000000000000000000000000000000471 192.0
DYD1_k127_361603_5 Histidine kinase - - - 0.0000000000005399 74.0
DYD1_k127_3628702_0 Polysulphide reductase, NrfD K00185 - - 6.73e-221 692.0
DYD1_k127_3628702_1 ABC-type Zn2 transport system, periplasmic component surface adhesin - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001154 390.0
DYD1_k127_3628702_2 Protein of unknown function (DUF3341) - - - 0.00000000000000000000000000000000000000000000000000000000000000000000004004 244.0
DYD1_k127_3628702_3 4Fe-4S dicluster domain K00184 - - 0.0000000000000000000000000000000000000000000000000000003779 195.0
DYD1_k127_3628702_4 Cytochrome C oxidase, cbb3-type, subunit III - - - 0.00000000000000000000000000000000000000001236 155.0
DYD1_k127_3628702_5 Cytochrome C oxidase, cbb3-type, subunit III - - - 0.000000000000000001843 91.0
DYD1_k127_3631909_0 Catalyzes the conversion of oxaloacetate (OAA) to phosphoenolpyruvate (PEP), the rate-limiting step in the metabolic pathway that produces glucose from lactate and other precursors derived from the citric acid cycle K01596 - 4.1.1.32 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003 604.0
DYD1_k127_3631909_1 Phosphorylase is an important allosteric enzyme in carbohydrate metabolism. Enzymes from different sources differ in their regulatory mechanisms and in their natural substrates. However, all known phosphorylases share catalytic and structural properties K00688 - 2.4.1.1 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005025 449.0
DYD1_k127_3631909_2 Catalyzes the phosphorylation of D-fructose 6-phosphate to fructose 1,6-bisphosphate by ATP, the first committing step of glycolysis K21071 - 2.7.1.11,2.7.1.90 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002099 423.0
DYD1_k127_365943_0 The UvrABC repair system catalyzes the recognition and processing of DNA lesions. UvrC both incises the 5' and 3' sides of the lesion. The N-terminal half is responsible for the 3' incision and the C-terminal half is responsible for the 5' incision K03703 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002644 501.0
DYD1_k127_365943_1 ATP cob(I)alamin adenosyltransferase K00798 - 2.5.1.17 0.000000000000000000000000000000000000000000000000006023 187.0
DYD1_k127_365943_2 Glucose / Sorbosone dehydrogenase - - - 0.000000000000000001448 86.0
DYD1_k127_365943_3 Methionine biosynthesis protein MetW - - - 0.00000000000008906 80.0
DYD1_k127_3659901_0 pyrroloquinoline quinone binding K01176 - 3.2.1.1 0.00000000000000000000000000000000000000000000000000000000003785 212.0
DYD1_k127_3659901_1 PFAM Forkhead-associated protein - - - 0.00000000001088 74.0
DYD1_k127_3660868_0 Catalyzes the conversion of glucosamine-6-phosphate to glucosamine-1-phosphate K03431 - 5.4.2.10 0.000000000000000000000000000000000000000000000000000000000000000004388 237.0
DYD1_k127_3660868_1 Catalyzes the condensation of 2 ATP molecules into cyclic di-AMP (c-di-AMP), a second messenger used to regulate differing processes in different bacteria K18672 - 2.7.7.85 0.00000000000000000000000000000000000000000000000000000000000006259 222.0
DYD1_k127_3660868_2 Catalyzes the condensation of 2 ATP molecules into cyclic di-AMP (c-di-AMP), a second messenger used to regulate differing processes in different bacteria - - - 0.000000000000006422 85.0
DYD1_k127_3664104_0 The beta subunit is responsible for the synthesis of L- tryptophan from indole and L-serine K01696 - 4.2.1.20 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002494 494.0
DYD1_k127_3664104_1 PFAM DAHP synthetase I KDSA K03856 - 2.5.1.54 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004827 391.0
DYD1_k127_3664104_2 The alpha subunit is responsible for the aldol cleavage of indoleglycerol phosphate to indole and glyceraldehyde 3- phosphate K01695 - 4.2.1.20 0.0000000000000000000000000000000000000000000003052 176.0
DYD1_k127_3664104_3 Catalyzes the Claisen rearrangement of chorismate to prephenate. Probably involved in the aromatic amino acid biosynthesis K06208 - 5.4.99.5 0.00000000000000000000000000000003739 130.0
DYD1_k127_3664104_4 Belongs to the TrpF family K01817 - 5.3.1.24 0.0000000000704 65.0
DYD1_k127_3686779_0 metallocarboxypeptidase activity - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001022 503.0
DYD1_k127_3686779_1 oligosaccharyl transferase activity K19003,K20327 - 2.4.1.336 0.000000000000000000000000000000002742 143.0
DYD1_k127_3702793_0 His Kinase A (phosphoacceptor) domain - - - 0.000000000000000000000000000000000000000000000000000000000001065 236.0
DYD1_k127_3702793_1 signal transduction protein containing a membrane domain an EAL and a GGDEF domain - - - 0.00000000000000000000000000002952 136.0
DYD1_k127_3702793_2 CHAD domain containing protein - - - 0.00000000000002628 83.0
DYD1_k127_3716186_0 Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family K07787 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003563 581.0
DYD1_k127_3716186_1 - - - - 0.00000000000000000000000000000000000000000000000000000002692 204.0
DYD1_k127_3716186_2 - - - - 0.00000000000003419 79.0
DYD1_k127_3716186_3 RES domain - - - 0.0000000004591 67.0
DYD1_k127_3716186_4 Cytochrome c - - - 0.0000007738 57.0
DYD1_k127_3718087_0 COG0644 Dehydrogenases (flavoproteins) - - - 9.694e-198 627.0
DYD1_k127_3718087_1 peptidase activity - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003844 449.0
DYD1_k127_3718087_2 Putative cyclase K07130 - 3.5.1.9 0.00000000000000000000000000000000000000000000000000000000000000000000000000003787 262.0
DYD1_k127_3718087_3 hemerythrin HHE cation binding domain - - - 0.000000000000000000000000000000000000000000000000000005458 196.0
DYD1_k127_3718087_4 EamA-like transporter family - - - 0.000000000000000000000000000000000000000000000000008786 191.0
DYD1_k127_3718087_5 Belongs to the heme-copper respiratory oxidase family - - - 0.000000000000000000000000000000000000000000000005867 190.0
DYD1_k127_3719425_0 Protein kinase domain K12132 - 2.7.11.1 0.00000000000000000000000000000000000000000000000000000000000000003958 229.0
DYD1_k127_3719425_1 PFAM SMP-30 Gluconolaconase - - - 0.000000000000003124 86.0
DYD1_k127_3719425_2 AntiSigma factor - - - 0.0000000007749 64.0
DYD1_k127_3719425_3 Psort location Cytoplasmic, score - - - 0.000158 45.0
DYD1_k127_3735683_0 Catalyzes the reversible phosphorylation of S-methyl-5'- thioadenosine (MTA) to adenine and 5-methylthioribose-1-phosphate. Involved in the breakdown of MTA, a major by-product of polyamine biosynthesis. Responsible for the first step in the methionine salvage pathway after MTA has been generated from S- adenosylmethionine. Has broad substrate specificity with 6- aminopurine nucleosides as preferred substrates K00772 GO:0000096,GO:0000097,GO:0003674,GO:0003824,GO:0004731,GO:0006082,GO:0006139,GO:0006144,GO:0006168,GO:0006520,GO:0006555,GO:0006725,GO:0006790,GO:0006807,GO:0008150,GO:0008152,GO:0008652,GO:0009058,GO:0009066,GO:0009067,GO:0009086,GO:0009112,GO:0009113,GO:0009987,GO:0016053,GO:0016740,GO:0016757,GO:0016763,GO:0017061,GO:0017144,GO:0018130,GO:0019438,GO:0019509,GO:0019752,GO:0034641,GO:0034654,GO:0042440,GO:0043094,GO:0043096,GO:0043101,GO:0043102,GO:0043436,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044272,GO:0044281,GO:0044283,GO:0046083,GO:0046084,GO:0046112,GO:0046148,GO:0046394,GO:0046483,GO:0055086,GO:0071265,GO:0071267,GO:0071704,GO:0072521,GO:0072522,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576,GO:1901605,GO:1901607 2.4.2.28 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002603 398.0
DYD1_k127_3735683_1 PFAM PfkB domain protein - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000003113 291.0
DYD1_k127_3743595_0 This is one of the proteins that binds to the 5S RNA in the ribosome where it forms part of the central protuberance K02897 GO:0003674,GO:0003676,GO:0003723,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0006412,GO:0006518,GO:0006807,GO:0008097,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0015934,GO:0019538,GO:0019843,GO:0022625,GO:0022626,GO:0032991,GO:0034641,GO:0034645,GO:0043043,GO:0043170,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:0071704,GO:0097159,GO:1901363,GO:1901564,GO:1901566,GO:1901576,GO:1990904 - 0.0000000000000000000000000000000000000000000000007397 183.0
DYD1_k127_3743595_1 The natural substrate for this enzyme may be peptidyl- tRNAs which drop off the ribosome during protein synthesis K01056 - 3.1.1.29 0.00000000000000000000000000000000000000001031 160.0
DYD1_k127_3743595_2 binds to the 23S rRNA K02939 GO:0003674,GO:0003676,GO:0003723,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0006412,GO:0006518,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0015934,GO:0019538,GO:0022625,GO:0022626,GO:0032991,GO:0034641,GO:0034645,GO:0043043,GO:0043170,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:0071704,GO:0097159,GO:1901363,GO:1901564,GO:1901566,GO:1901576,GO:1990904 - 0.0000000000000000000000000000000000000004832 153.0
DYD1_k127_3743595_3 Involved in the biosynthesis of the central metabolite phospho-alpha-D-ribosyl-1-pyrophosphate (PRPP) via the transfer of pyrophosphoryl group from ATP to 1-hydroxyl of ribose-5-phosphate (Rib-5-P) K00948 - 2.7.6.1 0.0000000000000000000000000000000000002469 143.0
DYD1_k127_3743595_4 Binds together with S18 to 16S ribosomal RNA K02990 - - 0.0000000000000002856 86.0
DYD1_k127_3743595_5 Binds as a heterodimer with protein S6 to the central domain of the 16S rRNA, where it helps stabilize the platform of the 30S subunit K02963 - - 0.0000000000003052 73.0
DYD1_k127_3772878_0 Major facilitator Superfamily - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004312 470.0
DYD1_k127_3772878_1 PFAM Dienelactone hydrolase K01061 - 3.1.1.45 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001247 318.0
DYD1_k127_3772878_2 Alpha-aspartyl dipeptidase-like K05995 GO:0003674,GO:0003824,GO:0006508,GO:0006807,GO:0008150,GO:0008152,GO:0008233,GO:0016787,GO:0019538,GO:0043170,GO:0044238,GO:0071704,GO:0140096,GO:1901564 3.4.13.21 0.000000000000000000000000000000000000000000000000000000000000000000000000000000006584 279.0
DYD1_k127_3772878_3 Catalyzes the epimerization of the C3' and C5'positions of dTDP-6-deoxy-D-xylo-4-hexulose, forming dTDP-6-deoxy-L-lyxo-4- hexulose K01790 - 5.1.3.13 0.00000000000000000000000000000000000000000000000000000000000000007291 226.0
DYD1_k127_3772878_4 Two component, sigma54 specific, transcriptional regulator, Fis family K02481,K07713 - - 0.000000000000000000000000000000000000000000000000000002112 206.0
DYD1_k127_3772878_5 COG0204 1-acyl-sn-glycerol-3-phosphate acyltransferase - - - 0.0000000000000000000000000000000002043 147.0
DYD1_k127_3776208_0 Signal transducing histidine kinase homodimeric K03407 - 2.7.13.3 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001587 511.0
DYD1_k127_3776208_1 COG2346, Truncated hemoglobins K06886 - - 0.00000000000000000000000000000000000000000000000000000000000003491 217.0
DYD1_k127_3776208_2 PFAM CheW domain protein K03408 - - 0.000000000000000000000000000001414 129.0
DYD1_k127_3777867_0 amino acid activation for nonribosomal peptide biosynthetic process - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000005942 280.0
DYD1_k127_3783229_0 efflux transmembrane transporter activity K02004 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001738 618.0
DYD1_k127_3783229_1 Toxic component of a toxin-antitoxin (TA) module K07171 - - 0.000000000000000000000000000000000000001256 150.0
DYD1_k127_3783229_3 topoisomerase K02469 - 5.99.1.3 0.00000000000001752 76.0
DYD1_k127_3783229_4 Protein kinase domain K12132 - 2.7.11.1 0.0000000009741 60.0
DYD1_k127_3785691_0 domain protein K13735 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000002678 294.0
DYD1_k127_3785691_1 His Kinase A (phosphoacceptor) domain - - - 0.000000000004646 68.0
DYD1_k127_3785691_2 Chitinase C K01183,K21606 - 3.2.1.14,3.2.1.202 0.00049 53.0
DYD1_k127_3792738_0 HflC and HflK could encode or regulate a protease K04088 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004794 434.0
DYD1_k127_3792738_1 HflC and HflK could regulate a protease K04087 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001007 357.0
DYD1_k127_3792738_2 Low molecular weight phosphatase family K03741 - 1.20.4.1 0.0000000000000000000000000000000000004446 143.0
DYD1_k127_3823424_0 TolB amino-terminal domain K03641 GO:0003674,GO:0005215,GO:0005488,GO:0005515,GO:0005575,GO:0005623,GO:0006810,GO:0008104,GO:0008150,GO:0009719,GO:0009987,GO:0010033,GO:0010243,GO:0015031,GO:0015833,GO:0015893,GO:0017038,GO:0019534,GO:0019904,GO:0022857,GO:0030288,GO:0030313,GO:0031975,GO:0032153,GO:0032991,GO:0033036,GO:0042221,GO:0042493,GO:0042597,GO:0042886,GO:0042891,GO:0043213,GO:0044464,GO:0044877,GO:0045184,GO:0046677,GO:0046678,GO:0050896,GO:0051179,GO:0051234,GO:0051716,GO:0055085,GO:0070887,GO:0071236,GO:0071237,GO:0071310,GO:0071417,GO:0071495,GO:0071702,GO:0071705,GO:1901652,GO:1901653,GO:1901698,GO:1901699,GO:1901700,GO:1901701,GO:1901998 - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000001879 284.0
DYD1_k127_3823424_1 PFAM OmpA MotB domain protein K03640 - - 0.000000000000000000000000000000000006902 143.0
DYD1_k127_3854109_0 transferase activity, transferring glycosyl groups K07011 - - 0.00000000000000000000000000000000000000000000000000000000000000000000009594 249.0
DYD1_k127_3854109_1 Bacterial membrane protein YfhO - - - 0.0000000000000000000000000000002921 143.0
DYD1_k127_3854109_2 Dolichyl-phosphate-mannose-protein mannosyltransferase - - - 0.00000000000000001388 97.0
DYD1_k127_386669_0 Glycogen recognition site of AMP-activated protein kinase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003422 345.0
DYD1_k127_386669_1 Belongs to the sigma-70 factor family. ECF subfamily K03088 - - 0.0000000000000000000000000000000000000000000001735 176.0
DYD1_k127_386932_0 DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates K03043 - 2.7.7.6 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007109 367.0
DYD1_k127_386932_1 Binds directly to 23S rRNA. The L1 stalk is quite mobile in the ribosome, and is involved in E site tRNA release K02863 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003682 302.0
DYD1_k127_386932_2 Participates in transcription elongation, termination and antitermination K02601 - - 0.00000000000000000000000000000000000000000000000000000000000000000000207 241.0
DYD1_k127_386932_3 Forms part of the ribosomal stalk which helps the ribosome interact with GTP-bound translation factors. Is thus essential for accurate translation K02935 - - 0.00000000000000000000000000000000000000000000000000000000000000003882 233.0
DYD1_k127_386932_4 Forms part of the ribosomal stalk which helps the ribosome interact with GTP-bound translation factors K02867 GO:0000027,GO:0003674,GO:0003676,GO:0003723,GO:0003735,GO:0005198,GO:0005488,GO:0005575,GO:0005618,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0006412,GO:0006415,GO:0006518,GO:0006807,GO:0006950,GO:0006996,GO:0007154,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009267,GO:0009605,GO:0009987,GO:0009991,GO:0010467,GO:0015934,GO:0015968,GO:0016043,GO:0019538,GO:0019843,GO:0022411,GO:0022607,GO:0022613,GO:0022618,GO:0022625,GO:0022626,GO:0030312,GO:0031667,GO:0031668,GO:0031669,GO:0032984,GO:0032991,GO:0033554,GO:0034622,GO:0034641,GO:0034645,GO:0040007,GO:0042254,GO:0042255,GO:0042273,GO:0042594,GO:0043043,GO:0043170,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043603,GO:0043604,GO:0043624,GO:0043933,GO:0044085,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:0050896,GO:0051716,GO:0065003,GO:0070925,GO:0071496,GO:0071704,GO:0071826,GO:0071840,GO:0071944,GO:0097159,GO:1901363,GO:1901564,GO:1901566,GO:1901576,GO:1990904 - 0.000000000000000000000000000000000000000000000000000000000002488 211.0
DYD1_k127_386932_5 Belongs to the bacterial ribosomal protein bL33 family K02913 - - 0.0000000001534 61.0
DYD1_k127_386932_7 P-P-bond-hydrolysis-driven protein transmembrane transporter activity K03073 GO:0005575,GO:0005618,GO:0005623,GO:0005886,GO:0005887,GO:0008150,GO:0016020,GO:0016021,GO:0030312,GO:0031224,GO:0031226,GO:0040007,GO:0044425,GO:0044459,GO:0044464,GO:0071944 - 0.000786 45.0
DYD1_k127_3876659_0 ABC transporter transmembrane region K06147 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004605 548.0
DYD1_k127_3876659_1 HlyD family secretion protein K13408 - - 0.00000000000000000002044 104.0
DYD1_k127_3879693_0 Insulinase (Peptidase family M16) K07263 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000001118 285.0
DYD1_k127_3879693_1 Coenzyme A transferase K01040 - 2.8.3.12 0.00000000000000000000000000000000000000000000000000000002975 200.0
DYD1_k127_388912_0 Catalyzes the formation of the alpha-1,6-glucosidic linkages in glycogen by scission of a 1,4-alpha-linked oligosaccharide from growing alpha-1,4-glucan chains and the subsequent attachment of the oligosaccharide to the alpha-1,6 position K00700 - 2.4.1.18 3.283e-284 885.0
DYD1_k127_388912_1 dna ligase K01971 - 6.5.1.1 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001128 373.0
DYD1_k127_388912_2 - - - - 0.0000000000000000000000000000000000000000000000000000000000000005301 225.0
DYD1_k127_388912_3 SUF system FeS assembly protein, NifU family K04488 - - 0.0000000000000000000000000000000000000000000000000005717 188.0
DYD1_k127_388912_4 DNA polymerase Ligase (LigD) K01971 - 6.5.1.1 0.000000000000000000000000000000000000000000000000002195 201.0
DYD1_k127_388912_5 Dolichyl-phosphate-mannose-protein mannosyltransferase - - - 0.000000000000000000000000000004187 136.0
DYD1_k127_388912_6 Beta-eliminating lyase K11717 - 2.8.1.7,4.4.1.16 0.0000007178 51.0
DYD1_k127_3891900_0 Cytochrome c - - - 9.504e-201 633.0
DYD1_k127_3891900_1 Domain in cystathionine beta-synthase and other proteins. - - - 0.000000000000000000000000000000000000001921 152.0
DYD1_k127_3891900_2 Destroys radicals which are normally produced within the cells and which are toxic to biological systems K04564 - 1.15.1.1 0.00000000006121 68.0
DYD1_k127_3893922_0 Catalyzes the decarboxylative condensation of pimeloyl- acyl-carrier protein and L-alanine to produce 8-amino-7- oxononanoate (AON), acyl-carrier protein , and carbon dioxide K00639 - 2.3.1.29 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001171 529.0
DYD1_k127_3893922_1 Converts heme B (protoheme IX) to heme O by substitution of the vinyl group on carbon 2 of heme B porphyrin ring with a hydroxyethyl farnesyl side group K02257 - 2.5.1.141 0.0000000000000000000000000000000000000000000000000000000000000000000001659 249.0
DYD1_k127_3893922_2 Protein of unknown function (DUF420) K08976 - - 0.000000000000000000000000000000000008634 140.0
DYD1_k127_3893922_3 4Fe-4S dicluster domain K05524 - - 0.00000000000000000000000000000000002383 136.0
DYD1_k127_3893922_4 Catalyzes the NAD( )-dependent oxidation of L-threonine to 2-amino-3-ketobutyrate K00060 - 1.1.1.103 0.000000000000000000000002341 117.0
DYD1_k127_3919771_0 Involved in the tonB-independent uptake of proteins K08884,K12132 - 2.7.11.1 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001849 391.0
DYD1_k127_3919771_1 RES - - - 0.000000000000000000000000000000004169 136.0
DYD1_k127_3919771_2 - - - - 0.0000000000000000000007465 106.0
DYD1_k127_3932769_0 AbgT putative transporter family K12942 - - 1.087e-227 717.0
DYD1_k127_3932769_1 PFAM Uncharacterised protein family (UPF0104) K07027 - - 0.00000000000000000000009857 105.0
DYD1_k127_3951384_0 TIGRFAM RNA polymerase sigma factor, sigma-70 family K03088 - - 0.00000000000000000000000002243 115.0
DYD1_k127_3951384_1 cell redox homeostasis K02199 - - 0.00000000000000000000007969 106.0
DYD1_k127_3951384_2 Putative zinc-finger - - - 0.000629 51.0
DYD1_k127_3953936_0 Amidohydrolase family K06015 - 3.5.1.81 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001485 311.0
DYD1_k127_3953936_1 - - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000001181 278.0
DYD1_k127_3953936_2 heme binding K03046 - 2.7.7.6 0.00000000000000000000000000000000542 145.0
DYD1_k127_3960562_0 SMART serine threonine protein kinase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001766 638.0
DYD1_k127_3960562_1 COGs COG4636 conserved - - - 0.00000000000000000000000000133 113.0
DYD1_k127_3960562_2 Adenylyl- / guanylyl cyclase, catalytic domain - - - 0.000000002134 70.0
DYD1_k127_3966845_0 Histidine kinase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006278 509.0
DYD1_k127_3966845_1 COGs COG2204 Response regulator containing CheY-like receiver AAA-type ATPase and DNA-binding domains K07713,K07714,K19641 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005629 481.0
DYD1_k127_3971321_0 Part of a stress-induced multi-chaperone system, it is involved in the recovery of the cell from heat-induced damage, in cooperation with DnaK, DnaJ and GrpE K03695 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001502 591.0
DYD1_k127_3971321_1 Belongs to the peptidase M48B family K03799 GO:0005575,GO:0005576,GO:0005623,GO:0005886,GO:0005887,GO:0016020,GO:0016021,GO:0031224,GO:0031226,GO:0044425,GO:0044459,GO:0044464,GO:0071944 - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004424 331.0
DYD1_k127_3971321_2 Prevents misfolding and promotes the refolding and proper assembly of unfolded polypeptides generated under stress conditions K04077 - - 0.00000000000000000000000000000000000000000000000000000000000005628 215.0
DYD1_k127_3971321_3 Binds to Cpn60 in the presence of Mg-ATP and suppresses the ATPase activity of the latter K04078 - - 0.000000000000000000000000000005829 121.0
DYD1_k127_3972745_0 One of the essential components for the initiation of protein synthesis. Protects formylmethionyl-tRNA from spontaneous hydrolysis and promotes its binding to the 30S ribosomal subunits. Also involved in the hydrolysis of GTP during the formation of the 70S ribosomal complex K02519 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002734 439.0
DYD1_k127_3972745_1 Responsible for synthesis of pseudouridine from uracil- 55 in the psi GC loop of transfer RNAs K03177 - 5.4.99.25 0.0000000000000000000000000000000000000000000000000000001127 205.0
DYD1_k127_3972745_2 Transfers the N-acyl diglyceride group on what will become the N-terminal cysteine of membrane lipoproteins K13292 - - 0.000000000000000000000000000000000000000000000000001486 192.0
DYD1_k127_3972745_3 Responsible for synthesis of pseudouridine from uracil K06180 - 5.4.99.23 0.00000000000000000000000000000000000000000000419 171.0
DYD1_k127_3972745_4 One of several proteins that assist in the late maturation steps of the functional core of the 30S ribosomal subunit. Associates with free 30S ribosomal subunits (but not with 30S subunits that are part of 70S ribosomes or polysomes). Required for efficient processing of 16S rRNA. May interact with the 5'-terminal helix region of 16S rRNA K02834 - - 0.00000000000000000008979 93.0
DYD1_k127_3973355_0 von Willebrand factor, type A - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007594 426.0
DYD1_k127_3973355_1 Beta-lactamase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002153 337.0
DYD1_k127_3973355_2 Receptor family ligand binding region K01999 - - 0.0000000000000000000000000000000000000000000000000000000007709 215.0
DYD1_k127_3973355_3 Uncharacterized conserved protein (DUF2183) - - - 0.000000000000000000000000000000004676 135.0
DYD1_k127_3980876_0 Amidohydrolase family K06015 - 3.5.1.81 4.022e-243 762.0
DYD1_k127_3980876_1 Catalyzes the removal of elemental sulfur and selenium atoms from L-cysteine, L-cystine, L-selenocysteine, and L- selenocystine to produce L-alanine K11717 - 2.8.1.7,4.4.1.16 0.00000000000000000000000000000002231 130.0
DYD1_k127_3981351_0 thiamine diphosphate biosynthetic process K03149 GO:0003674,GO:0003824,GO:0006725,GO:0006766,GO:0006767,GO:0006772,GO:0006790,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009110,GO:0009228,GO:0009987,GO:0017144,GO:0018130,GO:0019438,GO:0034641,GO:0042364,GO:0042723,GO:0042724,GO:0044237,GO:0044249,GO:0044271,GO:0044272,GO:0044281,GO:0044283,GO:0046483,GO:0071704,GO:0072527,GO:0072528,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576 2.8.1.10 0.000000000000000000000000000000000000000000000000000000000001832 213.0
DYD1_k127_3981351_1 DNA photolyase activity K03716 - 4.1.99.14 0.000000000000000000000000000000000000001613 160.0
DYD1_k127_3981351_2 - - - - 0.0000000000000000000000000000000002269 140.0
DYD1_k127_3981351_3 ThiS family K03154 - - 0.0000000000001182 74.0
DYD1_k127_3981351_4 mttA/Hcf106 family K03116 - - 0.000000001473 61.0
DYD1_k127_3982923_0 Serine threonine protein kinase K12132 - 2.7.11.1 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007021 550.0
DYD1_k127_3995574_0 Releases the supercoiling and torsional tension of DNA, which is introduced during the DNA replication and transcription, by transiently cleaving and rejoining one strand of the DNA duplex. Introduces a single-strand break via transesterification at a target site in duplex DNA. The scissile phosphodiester is attacked by the catalytic tyrosine of the enzyme, resulting in the formation of a DNA-(5'-phosphotyrosyl)-enzyme intermediate and the expulsion of a 3'-OH DNA strand. The free DNA strand then undergoes passage around the unbroken strand, thus removing DNA supercoils. Finally, in the religation step, the DNA 3'-OH attacks the covalent intermediate to expel the active-site tyrosine and restore the DNA phosphodiester backbone K03169 - 5.99.1.2 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004773 486.0
DYD1_k127_3995574_1 Responsible for synthesis of pseudouridine from uracil K06180 - 5.4.99.23 0.0000000000000000000000000000000000000001053 160.0
DYD1_k127_3995574_2 PFAM Endoribonuclease L-PSP K09022 - 3.5.99.10 0.000000000000000000000000000000000000001964 151.0
DYD1_k127_3995574_3 Lysylphosphatidylglycerol synthase TM region K07027 - - 0.000000000000000000000000003062 123.0
DYD1_k127_3995574_4 protein with SCP PR1 domains - - - 0.00000000000000914 85.0
DYD1_k127_4007130_0 PFAM Aminotransferase class I and II - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005053 496.0
DYD1_k127_4007130_1 Evidence 3 Function proposed based on presence of conserved amino acid motif, structural feature or limited homology - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001825 439.0
DYD1_k127_4007291_0 Catalyzes the 2-thiolation of uridine at the wobble position (U34) of tRNA, leading to the formation of s(2)U34 K00566 - 2.8.1.13 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002298 362.0
DYD1_k127_4007291_1 Oxygenase, catalysing oxidative methylation of damaged DNA K09990 - - 0.0000000000000000000000000000000007235 134.0
DYD1_k127_4007291_2 histone H2A K63-linked ubiquitination - - - 0.0000000000000000000000000000005739 130.0
DYD1_k127_4007291_3 Aminotransferase class-V K04487 GO:0000096,GO:0003674,GO:0003824,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005634,GO:0005654,GO:0005737,GO:0005739,GO:0005759,GO:0005829,GO:0006082,GO:0006139,GO:0006163,GO:0006464,GO:0006520,GO:0006725,GO:0006732,GO:0006753,GO:0006790,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009116,GO:0009117,GO:0009119,GO:0009141,GO:0009144,GO:0009150,GO:0009199,GO:0009205,GO:0009259,GO:0009987,GO:0016043,GO:0016226,GO:0016740,GO:0016782,GO:0016783,GO:0018130,GO:0018282,GO:0018283,GO:0019538,GO:0019637,GO:0019693,GO:0019752,GO:0022607,GO:0031071,GO:0031163,GO:0031974,GO:0031981,GO:0032324,GO:0034641,GO:0036211,GO:0042278,GO:0042802,GO:0042803,GO:0043170,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0043233,GO:0043412,GO:0043436,GO:0043545,GO:0043933,GO:0044085,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044281,GO:0044422,GO:0044424,GO:0044428,GO:0044429,GO:0044444,GO:0044446,GO:0044464,GO:0046039,GO:0046128,GO:0046483,GO:0046983,GO:0051186,GO:0051188,GO:0051189,GO:0055086,GO:0065003,GO:0070013,GO:0071704,GO:0071840,GO:0072521,GO:0090407,GO:1901068,GO:1901135,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576,GO:1901657 2.8.1.7 0.000000000000000009525 85.0
DYD1_k127_4025729_0 Type II/IV secretion system protein K02669 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001553 550.0
DYD1_k127_4025729_1 PFAM Type II secretion system F domain K02653 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009748 448.0
DYD1_k127_4053120_0 Zinc carboxypeptidase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002762 582.0
DYD1_k127_4053120_1 Protein kinase domain K12132 - 2.7.11.1 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001974 551.0
DYD1_k127_406795_0 that it carries out the mismatch recognition step. This protein has a weak ATPase activity K03555 GO:0003674,GO:0003676,GO:0003677,GO:0003684,GO:0003690,GO:0003824,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0006139,GO:0006259,GO:0006281,GO:0006298,GO:0006725,GO:0006807,GO:0006950,GO:0006974,GO:0008094,GO:0008150,GO:0008152,GO:0009987,GO:0016462,GO:0016787,GO:0016817,GO:0016818,GO:0016887,GO:0017111,GO:0030983,GO:0032300,GO:0032991,GO:0033554,GO:0034641,GO:0042623,GO:0043170,GO:0044237,GO:0044238,GO:0044260,GO:0044424,GO:0044464,GO:0046483,GO:0050896,GO:0051716,GO:0071704,GO:0090304,GO:0097159,GO:1901360,GO:1901363,GO:1990391 - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001912 582.0
DYD1_k127_4069643_0 Beta-Casp domain K07576 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001579 417.0
DYD1_k127_4069643_1 Beta-lactamase superfamily domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004666 323.0
DYD1_k127_4069643_2 dCMP deaminase activity K01493 - 3.5.4.12 0.0000000000000000000000000000000000000000000000000000004157 205.0
DYD1_k127_4072276_0 Zinc carboxypeptidase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004704 533.0
DYD1_k127_4072276_1 oligopeptide transporter - - - 0.00000000000000000000000000000000000000000000000000001432 192.0
DYD1_k127_4097188_0 4Fe-4S dicluster domain K00184 - - 0.0 1015.0
DYD1_k127_4097188_1 Cytochrome c7 and related cytochrome c - - - 0.0000000000000000000000000000001242 126.0
DYD1_k127_4101366_0 COGs COG0577 ABC-type antimicrobial peptide transport system permease component K02004 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005431 367.0
DYD1_k127_4101366_1 MacB-like periplasmic core domain K02004 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001955 326.0
DYD1_k127_4101366_2 ABC transporter K02003 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002153 317.0
DYD1_k127_4101366_3 Protein of unknown function DUF86 - - - 0.000000000000000000000000000000012 130.0
DYD1_k127_4101366_4 Nucleotidyltransferase domain K07075 - - 0.00000000000000000000000000003695 119.0
DYD1_k127_4101366_5 Efflux transporter, RND family, MFP subunit K02005 - - 0.0000000000000000000005622 100.0
DYD1_k127_411515_0 Protein of unknown function DUF72 - - - 0.00000000000000000000000000000000000000000000000000000168 201.0
DYD1_k127_411515_1 TonB-dependent receptor K02014 - - 0.0000000000000000000000000000000000000000002455 179.0
DYD1_k127_411515_2 Transglycosylase associated protein - - - 0.0000000000000009461 80.0
DYD1_k127_4118160_0 PFAM peptidase - - - 0.000000000000000000000005836 118.0
DYD1_k127_4124635_0 An essential GTPase which binds GTP, GDP and possibly (p)ppGpp with moderate affinity, with high nucleotide exchange rates and a fairly low GTP hydrolysis rate. Plays a role in control of the cell cycle, stress response, ribosome biogenesis and in those bacteria that undergo differentiation, in morphogenesis control K03979 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006442 389.0
DYD1_k127_4124635_1 Belongs to the peptidase M24B family K01262 - 3.4.11.9 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000001248 304.0
DYD1_k127_4124635_2 Belongs to the bacterial ribosomal protein bL27 family K02899 GO:0003674,GO:0003735,GO:0005198,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0015934,GO:0022625,GO:0022626,GO:0032991,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:1990904 - 0.000000000000000000000000000000001115 131.0
DYD1_k127_4124635_3 This protein binds to 23S rRNA in the presence of protein L20 K02888 GO:0003674,GO:0003735,GO:0005198 - 0.0000000000007114 70.0
DYD1_k127_412899_0 Catalyzes the isomerization of citrate to isocitrate via cis-aconitate K01681 - 4.2.1.3 0.0 1094.0
DYD1_k127_412899_1 ATP-dependent serine protease that mediates the selective degradation of mutant and abnormal proteins as well as certain short-lived regulatory proteins. Required for cellular homeostasis and for survival from DNA damage and developmental changes induced by stress. Degrades polypeptides processively to yield small peptide fragments that are 5 to 10 amino acids long. Binds to DNA in a double-stranded, site-specific manner K01338 - 3.4.21.53 4.035e-208 660.0
DYD1_k127_412899_2 Belongs to the small heat shock protein (HSP20) family K13993 - - 0.000000000000000000000000115 112.0
DYD1_k127_4132818_0 3-isopropylmalate dehydratase activity K01703,K20452 - 4.2.1.33,4.2.1.35,4.2.1.85 0.00000000000000000000000000000000000000000189 167.0
DYD1_k127_4134509_0 TIGRFAM molybdenum cofactor synthesis domain K03750 - 2.10.1.1 0.000000000000000000000000000000000000000000000000000000000000000000000000000003049 277.0
DYD1_k127_4134509_1 TIGRFAM molybdenum cofactor synthesis K03750,K07219 - 2.10.1.1 0.00000000000000000000000000000000000000000000000000000000000000006392 244.0
DYD1_k127_4134509_2 amine dehydrogenase activity - - - 0.00000000000000000000000000000001205 132.0
DYD1_k127_4134509_3 NAD(P)H-binding - - - 0.00003714 49.0
DYD1_k127_4140420_0 Oxidoreductase K06151 - 1.1.99.3 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004074 377.0
DYD1_k127_4140420_1 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). K13487 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000002918 261.0
DYD1_k127_4140420_2 glycosyl transferase family - - - 0.0003692 52.0
DYD1_k127_4150684_0 Histidine kinase - - - 0.000000000000000000000946 110.0
DYD1_k127_4155889_0 Domain of unknown function (DUF4440) - - - 0.0000000000000000000001102 105.0
DYD1_k127_4155889_1 DNA-templated transcription, initiation K03088 GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006355,GO:0006950,GO:0006970,GO:0008150,GO:0009266,GO:0009628,GO:0009889,GO:0010468,GO:0010556,GO:0019219,GO:0019222,GO:0031323,GO:0031326,GO:0044424,GO:0044464,GO:0050789,GO:0050794,GO:0050896,GO:0051171,GO:0051252,GO:0060255,GO:0065007,GO:0080090,GO:1903506,GO:2000112,GO:2001141 - 0.000000000001389 77.0
DYD1_k127_416543_0 TonB-dependent receptor K02014 - - 3.24e-209 670.0
DYD1_k127_416543_1 phosphorelay sensor kinase activity - - - 0.000000000000000000000000000000000000000000000000006461 194.0
DYD1_k127_416543_2 Domain of unknown function (DUF4154) - - - 0.000000000000000000000000000000000000002362 152.0
DYD1_k127_416543_3 Diguanylate cyclase K21023 - 2.7.7.65 0.0000000000000002154 91.0
DYD1_k127_4182436_0 Glycosyl transferases group 1 - - - 0.0000000000000000000000000000000000000000000000000000001635 202.0
DYD1_k127_4182436_1 transferase activity, transferring glycosyl groups - - - 0.000000000000000000000000000849 128.0
DYD1_k127_4186541_0 Arginyl tRNA synthetase N terminal dom K01887 GO:0003674,GO:0003824,GO:0004812,GO:0004814,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006082,GO:0006139,GO:0006399,GO:0006412,GO:0006418,GO:0006420,GO:0006518,GO:0006520,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0016070,GO:0016874,GO:0016875,GO:0019538,GO:0019752,GO:0034641,GO:0034645,GO:0034660,GO:0043038,GO:0043039,GO:0043043,GO:0043170,GO:0043436,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044281,GO:0044424,GO:0044464,GO:0046483,GO:0071704,GO:0090304,GO:0140098,GO:0140101,GO:1901360,GO:1901564,GO:1901566,GO:1901576 6.1.1.19 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006251 516.0
DYD1_k127_4186541_1 TIGRFAM ribonuclease, Rne Rng family K08300,K08301 - 3.1.26.12 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007227 478.0
DYD1_k127_4192171_0 Allophanate hydrolase subunit 2 K06350 - - 0.0000000000000000000000000000000000000000000002758 178.0
DYD1_k127_4192171_1 Belongs to the DNA glycosylase MPG family K03652 - 3.2.2.21 0.00000000000000000000000000000000000000000001734 174.0
DYD1_k127_4192171_2 AsmA-like C-terminal region K07289 - - 0.000004234 58.0
DYD1_k127_4211394_0 COGs COG1629 Outer membrane receptor protein mostly Fe transport K02014 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000876 388.0
DYD1_k127_4211394_1 Bifunctional nuclease K03617,K08999 GO:0005575,GO:0005618,GO:0005623,GO:0005886,GO:0016020,GO:0030312,GO:0044464,GO:0071944 - 0.000000000000000000000000000000000000000000000000000000000000007235 220.0
DYD1_k127_4211394_2 XdhC and CoxI family K07402 - - 0.000000000000000000000000000000000000000000002903 174.0
DYD1_k127_4211394_3 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase K07141,K19190 GO:0000287,GO:0003674,GO:0003824,GO:0005488,GO:0006139,GO:0006725,GO:0006732,GO:0006753,GO:0006777,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009108,GO:0009117,GO:0009165,GO:0009987,GO:0016740,GO:0016772,GO:0016779,GO:0018130,GO:0019438,GO:0019538,GO:0019637,GO:0019720,GO:0034641,GO:0034654,GO:0043167,GO:0043169,GO:0043170,GO:0043545,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044281,GO:0046483,GO:0046872,GO:0051186,GO:0051188,GO:0051189,GO:0055086,GO:0061602,GO:0070567,GO:0071704,GO:0090407,GO:1901293,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576,GO:1902759,GO:1902760 1.1.1.328,2.7.7.76 0.00000000000000000000000006793 114.0
DYD1_k127_4214389_0 Transglycosylase K05366 - 2.4.1.129,3.4.16.4 0.000000000000000000000000000000000000000000000000000000000000000000000000000000011 288.0
DYD1_k127_4228453_0 C-terminus of AA_permease K03294 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000775 481.0
DYD1_k127_4228453_1 Specifically methylates the cytosine at position 967 (m5C967) of 16S rRNA K03500 GO:0000154,GO:0001510,GO:0003674,GO:0003824,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006139,GO:0006364,GO:0006396,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0008168,GO:0008169,GO:0008173,GO:0008649,GO:0008757,GO:0009383,GO:0009451,GO:0009987,GO:0010467,GO:0016070,GO:0016072,GO:0016434,GO:0016740,GO:0016741,GO:0022613,GO:0031167,GO:0032259,GO:0034470,GO:0034641,GO:0034660,GO:0042254,GO:0043170,GO:0043412,GO:0043414,GO:0044085,GO:0044237,GO:0044238,GO:0044260,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0070475,GO:0071704,GO:0071840,GO:0090304,GO:0140098,GO:0140102,GO:1901360 2.1.1.176 0.0000000000000000000000000000000000000000000004786 179.0
DYD1_k127_4228453_2 protein-disulfide reductase activity K05807 - - 0.00000000000000002071 93.0
DYD1_k127_4241221_0 Phosphorolytic exoribonuclease that removes nucleotide residues following the -CCA terminus of tRNA and adds nucleotides to the ends of RNA molecules by using nucleoside diphosphates as substrates K00989,K02428 - 2.7.7.56,3.6.1.66 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004148 307.0
DYD1_k127_4241221_1 Ami_3 K01448 - 3.5.1.28 0.0000000000000000000000000000000000000000000000000000000000000000008156 247.0
DYD1_k127_4241221_2 QueT transporter K16928 - - 0.000000000000000000000000000000000001114 144.0
DYD1_k127_4241221_3 Sporulation and spore germination - - - 0.00000000000000000000000000003182 124.0
DYD1_k127_4241221_4 nuclear chromosome segregation - - - 0.000000000000000000000005685 117.0
DYD1_k127_4242995_0 Histidine Phosphotransfer domain K13490 - - 6.664e-223 713.0
DYD1_k127_4242995_1 cheY-homologous receiver domain K07315 - 3.1.3.3 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002702 467.0
DYD1_k127_4242995_2 catalyzes the demethylation of specific methylglutamate residues introduced into the chemoreceptors (methyl-accepting chemotaxis proteins) by CheR K03412,K13491 - 3.1.1.61,3.5.1.44 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002723 392.0
DYD1_k127_4242995_3 PFAM MCP methyltransferase, CheR-type K13486 - - 0.000000000000000000000000000000000000000000000000000000000000009557 225.0
DYD1_k127_4242995_4 Chemotaxis signal transduction protein K13489 - - 0.0000000000000000000000000000000000000000000000002494 183.0
DYD1_k127_4252121_0 Cytochrome c oxidase is the component of the respiratory chain that catalyzes the reduction of oxygen to water. Subunits 1- 3 form the functional core of the enzyme complex. CO I is the catalytic subunit of the enzyme. Electrons originating in cytochrome c are transferred via the copper A center of subunit 2 and heme A of subunit 1 to the bimetallic center formed by heme A3 and copper B K02274 - 1.9.3.1 2.654e-274 851.0
DYD1_k127_4252121_1 Subunits I and II form the functional core of the enzyme complex. Electrons originating in cytochrome c are transferred via heme a and Cu(A) to the binuclear center formed by heme a3 and Cu(B) K02275 - 1.9.3.1 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004649 388.0
DYD1_k127_4252121_2 signal sequence binding K07152 - - 0.00000000000000000000000000000000000007597 144.0
DYD1_k127_4269569_0 Catalyzes the synthesis of alpha-ribazole-5'-phosphate from nicotinate mononucleotide (NAMN) and 5,6- dimethylbenzimidazole (DMB) K00768 - 2.4.2.21 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000005272 296.0
DYD1_k127_4269569_1 Phytanoyl-CoA dioxygenase (PhyH) - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000001846 283.0
DYD1_k127_4269569_10 mercury ion transmembrane transporter activity - - - 0.00000000000000000000000000005965 124.0
DYD1_k127_4269569_11 MerR, DNA binding - - - 0.000000000000000000000002762 108.0
DYD1_k127_4269569_12 COG4206 Outer membrane cobalamin receptor protein K16092 - - 0.0000000255 57.0
DYD1_k127_4269569_13 MerT mercuric transport protein - - - 0.0000002981 59.0
DYD1_k127_4269569_14 Na H antiporter K03315 - - 0.0003881 44.0
DYD1_k127_4269569_2 conserved protein (COG2071) K09166 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000003994 280.0
DYD1_k127_4269569_3 Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily K02015 - - 0.0000000000000000000000000000000000000000000000000000000000000008341 234.0
DYD1_k127_4269569_4 Cobalamin adenosyltransferase K00798 - 2.5.1.17 0.000000000000000000000000000000000000000000000000000000000001203 214.0
DYD1_k127_4269569_5 PFAM periplasmic binding protein K02016 - - 0.000000000000000000000000000000000000000000000000000000008006 210.0
DYD1_k127_4269569_6 PFAM ABC transporter K02013 - 3.6.3.34 0.0000000000000000000000000000000000000000000000000001836 198.0
DYD1_k127_4269569_7 PFAM Xylose - - - 0.000000000000000000000000000000000000000000000000126 189.0
DYD1_k127_4269569_8 PFAM cobalbumin biosynthesis K02231 - 2.7.1.156,2.7.7.62 0.000000000000000000000000000000000000000008752 160.0
DYD1_k127_4269569_9 Joins adenosylcobinamide-GDP and alpha-ribazole to generate adenosylcobalamin (Ado-cobalamin). Also synthesizes adenosylcobalamin 5'-phosphate from adenosylcobinamide-GDP and alpha-ribazole 5'-phosphate K02233 - 2.7.8.26 0.000000000000000000000000000001994 130.0
DYD1_k127_4290210_0 Domain of unknown function (DUF4070) - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009309 537.0
DYD1_k127_4290210_1 FAD dependent oxidoreductase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001724 410.0
DYD1_k127_4301877_0 inorganic phosphate transmembrane transporter activity K02038 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001327 526.0
DYD1_k127_4301877_1 Catalyzes the attachment of serine to tRNA(Ser). Is also able to aminoacylate tRNA(Sec) with serine, to form the misacylated tRNA L-seryl-tRNA(Sec), which will be further converted into selenocysteinyl-tRNA(Sec) K01875 - 6.1.1.11 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000681 488.0
DYD1_k127_4301877_2 ATPase-coupled phosphate ion transmembrane transporter activity K02036 GO:0003674,GO:0003824,GO:0005215,GO:0006810,GO:0006811,GO:0006817,GO:0006820,GO:0008150,GO:0008509,GO:0015075,GO:0015103,GO:0015114,GO:0015318,GO:0015399,GO:0015405,GO:0015415,GO:0015698,GO:0016462,GO:0016787,GO:0016817,GO:0016818,GO:0016887,GO:0017111,GO:0022804,GO:0022857,GO:0034220,GO:0035435,GO:0042623,GO:0042626,GO:0043225,GO:0043492,GO:0051179,GO:0051234,GO:0055085,GO:0098656,GO:0098660,GO:0098661,GO:0099133 3.6.3.27 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004248 380.0
DYD1_k127_4301877_3 Binding-protein-dependent transport system inner membrane component K02037,K02038 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000004732 285.0
DYD1_k127_430291_0 Acts as a processive, ATP-dependent zinc metallopeptidase for both cytoplasmic and membrane proteins. Plays a role in the quality control of integral membrane proteins K03798 - - 6.962e-195 626.0
DYD1_k127_430291_1 Phosphatase K20074 - 3.1.3.16 0.0000000000000000000000000000000000000002195 157.0
DYD1_k127_430291_2 COGs COG5001 signal transduction protein containing a membrane domain an EAL and a GGDEF domain - - - 0.000000000000000000000003944 113.0
DYD1_k127_4321505_0 GXGXG motif - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002331 366.0
DYD1_k127_4321505_1 ABC transporter - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001065 309.0
DYD1_k127_4321505_2 Pfam Binding-protein-dependent transport system inner membrane component K02018 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000004701 284.0
DYD1_k127_4321505_3 Bacterial extracellular solute-binding protein K02020 - - 0.000000000000000000000000000000000000000000000000000000000000000002126 234.0
DYD1_k127_4321505_4 Peptidase family M23 - - - 0.000000000000000000000000000000000000000000002223 179.0
DYD1_k127_4321505_5 ketosteroid isomerase - - - 0.000000000000000000000000007581 116.0
DYD1_k127_4321505_6 molybdate ion transport - - - 0.00000000000000001339 89.0
DYD1_k127_4321505_7 Domain of unknown function (DUF4143) K07133 - - 0.0000000003412 61.0
DYD1_k127_4321505_8 Subtilase family K17734 - - 0.0007277 51.0
DYD1_k127_4326490_0 WD40-like Beta Propeller Repeat - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002648 554.0
DYD1_k127_4326490_1 Has a glutathione-disulfide oxidoreductase activity in the presence of NADPH and glutathione reductase. Reduces low molecular weight disulfides and proteins K03676 - - 0.00000000004611 67.0
DYD1_k127_4340084_0 Two component, sigma54 specific, transcriptional regulator, Fis family K02667 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001942 503.0
DYD1_k127_4340084_1 His Kinase A (phosphoacceptor) domain K02668 - 2.7.13.3 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000003369 297.0
DYD1_k127_4346490_0 Glycogen debranching enzyme - - - 2.822e-236 748.0
DYD1_k127_4346490_1 PemK-like, MazF-like toxin of type II toxin-antitoxin system K07171 - - 0.00000000000000000000000000000000000000000000006382 171.0
DYD1_k127_4346490_2 Transcriptional regulator - - - 0.00005287 50.0
DYD1_k127_43513_0 DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates K03046 - 2.7.7.6 0.0 1882.0
DYD1_k127_43513_1 DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates K03043 - 2.7.7.6 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001246 426.0
DYD1_k127_43513_2 Interacts with and stabilizes bases of the 16S rRNA that are involved in tRNA selection in the A site and with the mRNA backbone. Located at the interface of the 30S and 50S subunits, it traverses the body of the 30S subunit contacting proteins on the other side and probably holding the rRNA structure together. The combined cluster of proteins S8, S12 and S17 appears to hold together the shoulder and platform of the 30S subunit K02950 GO:0003674,GO:0003735,GO:0005198,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005840,GO:0006412,GO:0006518,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0019538,GO:0032991,GO:0034641,GO:0034645,GO:0043043,GO:0043170,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044424,GO:0044444,GO:0044464,GO:0071704,GO:1901564,GO:1901566,GO:1901576,GO:1990904 - 0.000000000000000000000000000000000000000000000000000000000000007793 218.0
DYD1_k127_43513_3 One of the primary rRNA binding proteins, it binds directly to 16S rRNA where it nucleates assembly of the head domain of the 30S subunit. Is located at the subunit interface close to the decoding center, probably blocks exit of the E-site tRNA K02992 GO:0000028,GO:0003674,GO:0003676,GO:0003723,GO:0003729,GO:0003735,GO:0005198,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0006412,GO:0006518,GO:0006807,GO:0006996,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0015935,GO:0016043,GO:0019538,GO:0019843,GO:0022607,GO:0022613,GO:0022618,GO:0022626,GO:0022627,GO:0032991,GO:0034622,GO:0034641,GO:0034645,GO:0042254,GO:0042255,GO:0042274,GO:0043043,GO:0043170,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043603,GO:0043604,GO:0043933,GO:0044085,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:0065003,GO:0070925,GO:0071704,GO:0071826,GO:0071840,GO:0097159,GO:1901363,GO:1901564,GO:1901566,GO:1901576,GO:1990904 - 0.000000000000000000000000000000000000000000000000000000004202 204.0
DYD1_k127_4361541_0 Part of the MsrPQ system that repairs oxidized periplasmic proteins containing methionine sulfoxide residues (Met-O), using respiratory chain electrons. Thus protects these proteins from oxidative-stress damage caused by reactive species of oxygen and chlorine generated by the host defense mechanisms. MsrPQ is essential for the maintenance of envelope integrity under bleach stress, rescuing a wide series of structurally unrelated periplasmic proteins from methionine oxidation. The catalytic subunit MsrP is non-stereospecific, being able to reduce both (R-) and (S-) diastereoisomers of methionine sulfoxide K07147 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003664 378.0
DYD1_k127_4361541_1 Catalyzes the reductive methylation of 2'-deoxyuridine- 5'-monophosphate (dUMP) to 2'-deoxythymidine-5'-monophosphate (dTMP) while utilizing 5,10-methylenetetrahydrofolate (mTHF) as the methyl donor and reductant in the reaction, yielding dihydrofolate (DHF) as a by-product. This enzymatic reaction provides an intracellular de novo source of dTMP, an essential precursor for DNA biosynthesis K00560 - 2.1.1.45 0.000000001363 64.0
DYD1_k127_4373191_0 Radical SAM enzyme that catalyzes the cyclization of dehypoxanthine futalosine (DHFL) into cyclic dehypoxanthine futalosine (CDHFL), a step in the biosynthesis of menaquinone (MK, vitamin K2) K11784 - 1.21.98.1 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005665 411.0
DYD1_k127_4373191_1 Participates in both transcription termination and antitermination K02600 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003617 362.0
DYD1_k127_4373191_2 One of the essential components for the initiation of protein synthesis. Protects formylmethionyl-tRNA from spontaneous hydrolysis and promotes its binding to the 30S ribosomal subunits. Also involved in the hydrolysis of GTP during the formation of the 70S ribosomal complex K02519 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000005718 282.0
DYD1_k127_4373191_3 Belongs to the 1-acyl-sn-glycerol-3-phosphate acyltransferase family K00655 - 2.3.1.51 0.00000000000000000000000000000000000001773 153.0
DYD1_k127_4373191_4 Single-strand binding protein family K03111 - - 0.0000000000000000000000000000000001033 138.0
DYD1_k127_4373191_5 Required for maturation of 30S ribosomal subunits K09748 GO:0000028,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006412,GO:0006518,GO:0006807,GO:0006996,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0016043,GO:0019538,GO:0022607,GO:0022613,GO:0022618,GO:0034622,GO:0034641,GO:0034645,GO:0042254,GO:0042255,GO:0042274,GO:0043043,GO:0043170,GO:0043603,GO:0043604,GO:0043933,GO:0044085,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044424,GO:0044444,GO:0044464,GO:0065003,GO:0070925,GO:0071704,GO:0071826,GO:0071840,GO:1901564,GO:1901566,GO:1901576 - 0.000000000000000000000000000008173 126.0
DYD1_k127_4373191_6 Dolichyl-phosphate-mannose-protein mannosyltransferase - - - 0.000001247 61.0
DYD1_k127_4373191_7 hmm pf07719 - - - 0.000003783 60.0
DYD1_k127_4380016_0 amino acid activation for nonribosomal peptide biosynthetic process - - - 0.0000000000000000000000000000000000000000000000000000000000000000007125 243.0
DYD1_k127_4380016_1 Putative restriction endonuclease - - - 0.0000000000000000000000000000000000000000000000002418 181.0
DYD1_k127_4384272_0 Catalyzes the GTP-dependent ribosomal translocation step during translation elongation. During this step, the ribosome changes from the pre-translocational (PRE) to the post- translocational (POST) state as the newly formed A-site-bound peptidyl-tRNA and P-site-bound deacylated tRNA move to the P and E sites, respectively. Catalyzes the coordinated movement of the two tRNA molecules, the mRNA and conformational changes in the ribosome K02355 - - 6.743e-298 926.0
DYD1_k127_4384272_1 This protein promotes the GTP-dependent binding of aminoacyl-tRNA to the A-site of ribosomes during protein biosynthesis K02358 - - 0.0000000909 54.0
DYD1_k127_4385771_0 choline dehydrogenase activity - - - 1.649e-262 816.0
DYD1_k127_4385771_1 Pyridine nucleotide-disulphide oxidoreductase K03885 - 1.6.99.3 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003882 548.0
DYD1_k127_4385771_2 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004874 450.0
DYD1_k127_4385771_3 Carbon-nitrogen hydrolase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002229 385.0
DYD1_k127_4385771_4 NADPH-dependent FMN reductase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000008938 285.0
DYD1_k127_4385771_5 xylan catabolic process K03932 - - 0.00000000000000000000000000000000000000000000000000000000000000000004035 243.0
DYD1_k127_4391237_0 PLD-like domain K06131 - - 0.000000000000000000000000000000000000000000000000000000000000000000008293 240.0
DYD1_k127_4391237_1 Catalyzes the specific phosphorylation of the 3-hydroxyl group of shikimic acid using ATP as a cosubstrate K00891,K15546 - 2.7.1.71 0.00000000000000000000000000000000000000000000000000000008772 203.0
DYD1_k127_4391237_2 Enoyl-CoA hydratase/isomerase K15513 - 4.1.2.44 0.0000000002002 62.0
DYD1_k127_4403059_0 Inner membrane component of T3SS, cytoplasmic domain - - - 0.000000000000000000000000000000000000000000000000000000001339 227.0
DYD1_k127_4407817_0 DNA-templated transcription, initiation K03088 - - 0.00000000000000000000000000000000000000000001029 167.0
DYD1_k127_4407817_1 4-vinyl reductase, 4VR - - - 0.0000000000000000000000000000000000003801 147.0
DYD1_k127_4407817_3 - - - - 0.00000000007249 67.0
DYD1_k127_4419378_0 Voltage gated chloride channel K03281 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002952 460.0
DYD1_k127_4419378_1 - - - - 0.0000000001779 70.0
DYD1_k127_4421161_0 protein related to plant photosystem II stability assembly factor - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006376 584.0
DYD1_k127_4421161_1 ThiS family K03636 - - 0.00000000000000000003302 98.0
DYD1_k127_4422016_0 Sugar (and other) transporter - - - 1.543e-200 633.0
DYD1_k127_4422016_1 Glycosyl hydrolase family 47 K01230,K10085 - 3.2.1.113 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005611 533.0
DYD1_k127_4426743_0 two component, sigma54 specific, transcriptional regulator, Fis family K02481,K07712 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003384 323.0
DYD1_k127_4426743_1 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase K13924 - 2.1.1.80,3.1.1.61 0.0000000000000000000000003646 115.0
DYD1_k127_4426743_2 Fungalysin metallopeptidase (M36) - - - 0.0000000000001637 80.0
DYD1_k127_4426743_3 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase - - - 0.000001497 53.0
DYD1_k127_4428507_0 serine threonine protein kinase K08884,K12132 GO:0002237,GO:0003674,GO:0003824,GO:0004672,GO:0004674,GO:0005488,GO:0005539,GO:0005575,GO:0005623,GO:0005886,GO:0006464,GO:0006468,GO:0006793,GO:0006796,GO:0006807,GO:0007154,GO:0007165,GO:0008150,GO:0008152,GO:0009605,GO:0009607,GO:0009617,GO:0009719,GO:0009847,GO:0009987,GO:0010033,GO:0010243,GO:0016020,GO:0016301,GO:0016310,GO:0016740,GO:0016772,GO:0016773,GO:0019538,GO:0023052,GO:0032494,GO:0032502,GO:0036211,GO:0042221,GO:0042834,GO:0043170,GO:0043207,GO:0043412,GO:0044237,GO:0044238,GO:0044260,GO:0044267,GO:0044464,GO:0050789,GO:0050794,GO:0050896,GO:0051704,GO:0051707,GO:0051716,GO:0065007,GO:0070887,GO:0071216,GO:0071219,GO:0071224,GO:0071310,GO:0071417,GO:0071495,GO:0071704,GO:0071944,GO:0097367,GO:0140096,GO:1901564,GO:1901698,GO:1901699,GO:1901700,GO:1901701 2.7.11.1 0.000000000000000000000000000000001997 145.0
DYD1_k127_4428507_1 cellulose binding - - - 0.0000000000000000001002 94.0
DYD1_k127_4429091_0 serine-type peptidase activity K01303 - 3.4.19.1 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003435 557.0
DYD1_k127_4429091_1 zinc-ribbon domain - - - 0.000000000000001346 87.0
DYD1_k127_4429091_2 PAP2 superfamily - - - 0.000000000002298 78.0
DYD1_k127_4439614_0 COG1902 NADH flavin oxidoreductases, Old Yellow Enzyme family - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009706 520.0
DYD1_k127_4439614_1 Aminotransferase class-V K01556 - 3.7.1.3 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001009 458.0
DYD1_k127_4439614_2 Acyl-CoA dehydrogenase, C-terminal domain K00249 - 1.3.8.7 0.000000000000000000000000000000000000000000000000000001026 197.0
DYD1_k127_4439614_3 Heme-dependent dioxygenase that catalyzes the oxidative cleavage of the L-tryptophan (L-Trp) pyrrole ring and converts L- tryptophan to N-formyl-L-kynurenine. Catalyzes the oxidative cleavage of the indole moiety K00453 GO:0003674,GO:0003824,GO:0004833,GO:0005488,GO:0006082,GO:0006520,GO:0006568,GO:0006569,GO:0006576,GO:0006586,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0009056,GO:0009063,GO:0009072,GO:0009074,GO:0009308,GO:0009310,GO:0009987,GO:0016043,GO:0016054,GO:0016491,GO:0016701,GO:0016702,GO:0019439,GO:0019441,GO:0019752,GO:0020037,GO:0022607,GO:0034641,GO:0042180,GO:0042402,GO:0042430,GO:0042436,GO:0042537,GO:0043436,GO:0043933,GO:0044085,GO:0044106,GO:0044237,GO:0044238,GO:0044248,GO:0044270,GO:0044281,GO:0044282,GO:0046218,GO:0046395,GO:0046483,GO:0046700,GO:0046906,GO:0048037,GO:0051213,GO:0051259,GO:0051260,GO:0051262,GO:0051289,GO:0055114,GO:0065003,GO:0070189,GO:0071704,GO:0071840,GO:0097159,GO:1901360,GO:1901361,GO:1901363,GO:1901564,GO:1901565,GO:1901575,GO:1901605,GO:1901606 1.13.11.11 0.000000000000000000000000000000000000000000002525 169.0
DYD1_k127_4446128_0 lipid A biosynthesis acyltransferase K02517 - 2.3.1.241 0.0000000000000000000000000000001144 136.0
DYD1_k127_4446128_1 PHP domain protein - - - 0.0000000000000000000000003769 118.0
DYD1_k127_4446128_2 O-methyltransferase K07003 - - 0.00000000000005036 78.0
DYD1_k127_4446128_3 Glycosyl transferase family 2 - - - 0.00000000211 66.0
DYD1_k127_4446128_4 Phosphopantetheine attachment site K02078 - - 0.0004646 47.0
DYD1_k127_4453406_0 Spermine/spermidine synthase domain K00797 - 2.5.1.16 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001196 582.0
DYD1_k127_4453406_1 Glycosyl transferase family 2 - - - 0.0000000000000000000000000000000000000000000000000000000000003928 219.0
DYD1_k127_4453406_2 Tetratricopeptide repeat - - - 0.00003309 55.0
DYD1_k127_4456023_0 PFAM band 7 protein - GO:0005575,GO:0005623,GO:0005886,GO:0016020,GO:0044464,GO:0071944 - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005844 387.0
DYD1_k127_4456023_1 Catalyzes the dehydration of methylthioribulose-1- phosphate (MTRu-1-P) into 2,3-diketo-5-methylthiopentyl-1- phosphate (DK-MTP-1-P) K08964 - 4.2.1.109 0.00000000000000000000000000000000000000000000000004887 184.0
DYD1_k127_4456023_2 Membrane protease subunits, stomatin prohibitin homologs - - - 0.000000000000000000000005637 104.0
DYD1_k127_4456023_3 NfeD-like C-terminal, partner-binding - - - 0.000000000000000000000007088 108.0
DYD1_k127_4460138_0 Polysaccharide biosynthesis protein K01784,K08679 - 5.1.3.2,5.1.3.6 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003066 385.0
DYD1_k127_4460138_1 Belongs to the ribulose-phosphate 3-epimerase family K01783 GO:0003674,GO:0003824,GO:0004750,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005975,GO:0005996,GO:0006081,GO:0006098,GO:0006139,GO:0006725,GO:0006732,GO:0006733,GO:0006739,GO:0006753,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0009052,GO:0009056,GO:0009117,GO:0009987,GO:0016052,GO:0016853,GO:0016854,GO:0016857,GO:0019321,GO:0019323,GO:0019362,GO:0019637,GO:0019682,GO:0019693,GO:0034641,GO:0043167,GO:0043169,GO:0044237,GO:0044238,GO:0044262,GO:0044281,GO:0044282,GO:0044424,GO:0044444,GO:0044464,GO:0046365,GO:0046483,GO:0046496,GO:0046872,GO:0051156,GO:0051186,GO:0055086,GO:0071704,GO:0072524,GO:1901135,GO:1901360,GO:1901564,GO:1901575 5.1.3.1 0.0000000000000000000000000000000000000000000000000000000000000000000000000001467 263.0
DYD1_k127_4460138_2 Reversibly transfers an adenylyl group from ATP to 4'- phosphopantetheine, yielding dephospho-CoA (dPCoA) and pyrophosphate K00954 GO:0003674,GO:0003824,GO:0004595,GO:0006139,GO:0006163,GO:0006164,GO:0006725,GO:0006732,GO:0006753,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009108,GO:0009117,GO:0009150,GO:0009152,GO:0009165,GO:0009259,GO:0009260,GO:0009987,GO:0015936,GO:0015937,GO:0016740,GO:0016772,GO:0016779,GO:0018130,GO:0019438,GO:0019637,GO:0019693,GO:0033865,GO:0033866,GO:0033875,GO:0034030,GO:0034032,GO:0034033,GO:0034641,GO:0034654,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0046390,GO:0046483,GO:0051186,GO:0051188,GO:0055086,GO:0070566,GO:0071704,GO:0072521,GO:0072522,GO:0090407,GO:1901135,GO:1901137,GO:1901293,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576 2.7.7.3 0.000000000000000000000000000000000000000000000000000000118 199.0
DYD1_k127_4460138_3 PFAM thioesterase superfamily K07107 - - 0.0000000000000000000000000000000004021 135.0
DYD1_k127_4460138_4 serine threonine protein kinase K08884,K12132 GO:0002237,GO:0003674,GO:0003824,GO:0004672,GO:0004674,GO:0005488,GO:0005539,GO:0005575,GO:0005623,GO:0005886,GO:0006464,GO:0006468,GO:0006793,GO:0006796,GO:0006807,GO:0007154,GO:0007165,GO:0008150,GO:0008152,GO:0009605,GO:0009607,GO:0009617,GO:0009719,GO:0009847,GO:0009987,GO:0010033,GO:0010243,GO:0016020,GO:0016301,GO:0016310,GO:0016740,GO:0016772,GO:0016773,GO:0019538,GO:0023052,GO:0032494,GO:0032502,GO:0036211,GO:0042221,GO:0042834,GO:0043170,GO:0043207,GO:0043412,GO:0044237,GO:0044238,GO:0044260,GO:0044267,GO:0044464,GO:0050789,GO:0050794,GO:0050896,GO:0051704,GO:0051707,GO:0051716,GO:0065007,GO:0070887,GO:0071216,GO:0071219,GO:0071224,GO:0071310,GO:0071417,GO:0071495,GO:0071704,GO:0071944,GO:0097367,GO:0140096,GO:1901564,GO:1901698,GO:1901699,GO:1901700,GO:1901701 2.7.11.1 0.000000000000002758 85.0
DYD1_k127_4460230_0 Belongs to the thiolase family K00626 - 2.3.1.9 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000124 497.0
DYD1_k127_4460230_1 Coenzyme A transferase K01028 - 2.8.3.5 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005316 354.0
DYD1_k127_4460230_2 ArgK protein K07588 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000002659 299.0
DYD1_k127_4460230_3 Coenzyme A transferase K01029,K01035 - 2.8.3.5,2.8.3.8,2.8.3.9 0.00000000000000000000000000000000000000000000000000000000000000000000000000000001076 274.0
DYD1_k127_4460230_4 Glyoxalase-like domain K05606 - 5.1.99.1 0.00000000000000000000000000000000002452 138.0
DYD1_k127_4460230_5 - - - - 0.0000000005318 65.0
DYD1_k127_447071_0 Pyridoxal-dependent decarboxylase conserved domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008047 537.0
DYD1_k127_447071_1 Hsp20/alpha crystallin family K13993 - - 0.000000000000000005203 89.0
DYD1_k127_4482237_0 Belongs to the pirin family K06911 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001541 346.0
DYD1_k127_4482237_1 ASPIC and UnbV - - - 0.0000000000000000000000000000000000000000000000000003554 202.0
DYD1_k127_4482237_2 Antitoxin component of a toxin-antitoxin (TA) module - - - 0.00000002613 56.0
DYD1_k127_4485059_0 Cell wall formation. Synthesis of cross-linked peptidoglycan from the lipid intermediates. The enzyme has a penicillin-insensitive transglycosylase N-terminal domain (formation of linear glycan strands) and a penicillin-sensitive transpeptidase C-terminal domain (cross-linking of the peptide subunits) K05365 - 2.4.1.129,3.4.16.4 0.0000000000000000000000000000000000000000000000000000000000000000000003195 254.0
DYD1_k127_4485059_1 Histidine kinase K00936,K02030 - 2.7.13.3 0.00000000000000000000000000000000000000000000000000000001068 213.0
DYD1_k127_4485059_2 Histidine kinase K07315 - 3.1.3.3 0.000000000000000000127 93.0
DYD1_k127_4492518_0 ATP synthase alpha/beta family, beta-barrel domain K02412,K03224 - 3.6.3.14 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002742 397.0
DYD1_k127_4492518_1 FliP family K03226 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000165 277.0
DYD1_k127_4492518_2 Required for formation of the rod structure in the basal body of the flagellar apparatus. Together with FliI and FliH, may constitute the export apparatus of flagellin K02401 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000003008 265.0
DYD1_k127_4492518_3 Flagellar biosynthetic protein FliR K02421 - - 0.0000000000000000000000000000000000000000000000002967 186.0
DYD1_k127_4492518_4 Type III secretion protein K03230 - - 0.00000000000000000001992 98.0
DYD1_k127_4492518_5 Role in flagellar biosynthesis K02420 - - 0.00000000000000000009757 96.0
DYD1_k127_4492518_6 Inner membrane component of T3SS, cytoplasmic domain - - - 0.0000001708 64.0
DYD1_k127_4492518_7 Flagellar biosynthesis protein, FliO - - - 0.0000002443 58.0
DYD1_k127_4492518_8 YscO-like protein - - - 0.0000003261 59.0
DYD1_k127_4492518_9 Type III K03225 - - 0.00001121 58.0
DYD1_k127_4515928_0 ATP-dependent specificity component of the Clp protease. It directs the protease to specific substrates. Can perform chaperone functions in the absence of ClpP K03544 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005714 537.0
DYD1_k127_4515928_1 Cleaves peptides in various proteins in a process that requires ATP hydrolysis. Has a chymotrypsin-like activity. Plays a major role in the degradation of misfolded proteins K01358 - 3.4.21.92 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000001385 278.0
DYD1_k127_4515928_2 ATP-dependent serine protease that mediates the selective degradation of mutant and abnormal proteins as well as certain short-lived regulatory proteins. Required for cellular homeostasis and for survival from DNA damage and developmental changes induced by stress. Degrades polypeptides processively to yield small peptide fragments that are 5 to 10 amino acids long. Binds to DNA in a double-stranded, site-specific manner K01338 - 3.4.21.53 0.00000519 49.0
DYD1_k127_451864_0 PFAM Rieske 2Fe-2S domain protein K00479,K00499,K05708 - 1.14.12.19,1.14.15.7 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009827 507.0
DYD1_k127_451864_1 PFAM Substrate binding domain of ABC-type glycine betaine transport system K05845,K05846 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000123 353.0
DYD1_k127_451864_2 Binding-protein-dependent transport system inner membrane component K05846 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000008514 251.0
DYD1_k127_4530223_0 Belongs to the CinA family K03742,K03743 - 3.5.1.42 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000296 278.0
DYD1_k127_4530223_1 Hydrolyzes RNA 2',3'-cyclic phosphodiester to an RNA 2'- phosphomonoester K01975 - 3.1.4.58 0.00000000000000000000000000000004044 132.0
DYD1_k127_4530223_2 Catalyzes the transfer of an acyl group from acyl- phosphate (acyl-PO(4)) to glycerol-3-phosphate (G3P) to form lysophosphatidic acid (LPA). This enzyme utilizes acyl-phosphate as fatty acyl donor, but not acyl-CoA or acyl-ACP K08591 - 2.3.1.15 0.00001502 48.0
DYD1_k127_4539611_0 The glycine cleavage system catalyzes the degradation of glycine. The P protein binds the alpha-amino group of glycine through its pyridoxal phosphate cofactor K00283 - 1.4.4.2 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001002 454.0
DYD1_k127_4539611_1 - - - - 0.0000000000000000007544 97.0
DYD1_k127_4539611_2 - - - - 0.000000000000000001054 95.0
DYD1_k127_4539611_3 Helix-turn-helix domain - - - 0.000000000003158 72.0
DYD1_k127_4552449_0 DNA-directed DNA polymerase activity K02347,K03581,K04477 - 3.1.11.5 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000006252 287.0
DYD1_k127_4552449_1 PFAM SNARE associated Golgi protein - - - 0.000000000000000000000000000000000000000000000000000000000000000000003889 246.0
DYD1_k127_4577384_0 Protein of unknown function (DUF2662) - GO:0003674,GO:0003676,GO:0003723,GO:0003729,GO:0005488,GO:0005575,GO:0005618,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0030312,GO:0044424,GO:0044444,GO:0044464,GO:0071944,GO:0097159,GO:1901363 - 0.000000008829 64.0
DYD1_k127_4577384_1 nuclease activity K06218 - - 0.00000004266 58.0
DYD1_k127_4577384_2 protein kinase related protein - - - 0.00000004705 55.0
DYD1_k127_4577384_3 positive regulation of growth - - - 0.0003157 46.0
DYD1_k127_4583884_0 GTPase that plays an essential role in the late steps of ribosome biogenesis K03977 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002709 374.0
DYD1_k127_4583884_1 GTP binding K06883 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000006549 282.0
DYD1_k127_4583884_2 Saccharopine dehydrogenase C-terminal domain - - - 0.00000000000000000000000000000000000000000000000000000000000001919 225.0
DYD1_k127_4584298_0 acyl-CoA dehydrogenase activity K00252 GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005739,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0044424,GO:0044444,GO:0044464 1.3.8.6 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005411 535.0
DYD1_k127_4584298_1 Belongs to the thiolase family K00626 - 2.3.1.9 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001776 393.0
DYD1_k127_4584298_2 S-adenosyl-l-methionine hydroxide adenosyltransferase K22205 - - 0.0000000000000000000000000000000000000000000000000000000000000000007544 237.0
DYD1_k127_4584298_3 Enoyl-CoA hydratase K07537 - 4.2.1.100 0.00000000000000000000000000000000000000000000000000000000143 209.0
DYD1_k127_4584298_4 Cell division protein FtsI penicillin-binding protein K05364 - - 0.00000000000000000000000000000000009917 151.0
DYD1_k127_4584298_5 metallopeptidase activity - - - 0.00000000000000000000000000001042 129.0
DYD1_k127_4584298_6 Oxidoreductase - - - 0.000000000000000000000001297 110.0
DYD1_k127_4585256_0 5TM C-terminal transporter carbon starvation CstA K06200 - - 2.014e-240 756.0
DYD1_k127_4585256_1 CAAX prenyl protease N-terminal, five membrane helices K06013 - 3.4.24.84 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000001012 291.0
DYD1_k127_4586024_0 Aminotransferase class I and II K10907 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004215 334.0
DYD1_k127_4586024_1 CBS domain K03699 - - 0.00000000000000000000000000000000000000000000000000000001838 213.0
DYD1_k127_4586024_2 CarD-like/TRCF domain K07736 - - 0.0000000000000000000000000000000001182 138.0
DYD1_k127_4587238_0 von Willebrand factor, type A - - - 0.000000000000000000000000000000000000000000004323 179.0
DYD1_k127_4587238_1 WD40 repeats K12132 - 2.7.11.1 0.000000000000000000000000000000000004639 147.0
DYD1_k127_4595308_0 Dienelactone hydrolase family K01061 - 3.1.1.45 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004814 330.0
DYD1_k127_4595308_1 Catalyzes the oxidation of glucose 6-phosphate to 6- phosphogluconolactone K00036 - 1.1.1.363,1.1.1.49 0.000000000000000000000000000000000000000000000000000000000000000000000000001718 263.0
DYD1_k127_4595308_2 Aspartyl protease - - - 0.000000003045 69.0
DYD1_k127_461214_0 Protein tyrosine kinase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003443 317.0
DYD1_k127_461214_1 Part of the phosphoribosylformylglycinamidine synthase complex involved in the purines biosynthetic pathway. Catalyzes the ATP-dependent conversion of formylglycinamide ribonucleotide (FGAR) and glutamine to yield formylglycinamidine ribonucleotide (FGAM) and glutamate. The FGAM synthase complex is composed of three subunits. PurQ produces an ammonia molecule by converting glutamine to glutamate. PurL transfers the ammonia molecule to FGAR to form FGAM in an ATP-dependent manner. PurS interacts with PurQ and PurL and is thought to assist in the transfer of the ammonia molecule from PurQ to PurL K01952 - 6.3.5.3 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000002021 297.0
DYD1_k127_461214_2 Metallo-beta-lactamase superfamily - - - 0.0000000000000000000000000000000000000000000000000000000000001176 222.0
DYD1_k127_461214_3 Belongs to the peptidase M16 family - - - 0.0000000000000000000000000000000000000000000008835 171.0
DYD1_k127_461214_4 Belongs to the CDP-alcohol phosphatidyltransferase class-I family K00995 - 2.7.8.5 0.00000000000000000000000000000000000008073 150.0
DYD1_k127_461214_5 Protein of unknown function (DUF962) - - - 0.000000000000000000001435 100.0
DYD1_k127_461214_6 Part of the phosphoribosylformylglycinamidine synthase complex involved in the purines biosynthetic pathway. Catalyzes the ATP-dependent conversion of formylglycinamide ribonucleotide (FGAR) and glutamine to yield formylglycinamidine ribonucleotide (FGAM) and glutamate. The FGAM synthase complex is composed of three subunits. PurQ produces an ammonia molecule by converting glutamine to glutamate. PurL transfers the ammonia molecule to FGAR to form FGAM in an ATP-dependent manner. PurS interacts with PurQ and PurL and is thought to assist in the transfer of the ammonia molecule from PurQ to PurL K01952 - 6.3.5.3 0.000000000000000633 81.0
DYD1_k127_461689_0 metallopeptidase activity K03592 - - 0.00000000000000000000253 111.0
DYD1_k127_461689_1 Tetratricopeptide repeat - - - 0.00009724 54.0
DYD1_k127_4631545_0 Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released K03092 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002318 408.0
DYD1_k127_4631545_1 Catalyzes the ATP- as well as the pyrophosphate- dependent phosphorylation of a specific serine residue in HPr, a phosphocarrier protein of the phosphoenolpyruvate-dependent sugar phosphotransferase system (PTS). HprK P also catalyzes the pyrophosphate-producing, inorganic phosphate-dependent dephosphorylation (phosphorolysis) of seryl-phosphorylated HPr (P- Ser-HPr) K06023 GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0044424,GO:0044444,GO:0044464 - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002514 313.0
DYD1_k127_4631545_2 ABC transporter K06861 - - 0.000000000000000000000000000000000000000002819 159.0
DYD1_k127_4631545_3 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 K02806 - - 0.000000000000000000000000000000002475 134.0
DYD1_k127_4631545_4 Required for dimerization of active 70S ribosomes into 100S ribosomes in stationary phase K05808 - - 0.000000000000000000000000002059 120.0
DYD1_k127_4642921_0 Serine phosphatase RsbU regulator of sigma subunit K07315 - 3.1.3.3 0.000000000000000000000000000000000000000000000000000000000000000000000000000003769 284.0
DYD1_k127_4642921_1 MazG nucleotide pyrophosphohydrolase domain K02499 - - 0.0000000000000000000000000000003768 126.0
DYD1_k127_4642921_2 STAS domain K04749,K06378 - - 0.0000000000000000000000000002713 117.0
DYD1_k127_4642921_3 sigma factor antagonist activity K04757,K07315 - 2.7.11.1,3.1.3.3 0.0000000000000000000004084 101.0
DYD1_k127_4642994_0 Putative esterase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003054 372.0
DYD1_k127_4642994_1 Evidence 3 Function proposed based on presence of conserved amino acid motif, structural feature or limited homology K00363,K05710 - 1.7.1.15 0.000000000000000000000000000000401 124.0
DYD1_k127_4642994_2 COG0444 ABC-type dipeptide oligopeptide nickel transport system ATPase component K02031,K02032 - - 0.00000002894 60.0
DYD1_k127_4644190_0 GTPase that associates with the 50S ribosomal subunit and may have a role during protein synthesis or ribosome biogenesis K03665 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003844 376.0
DYD1_k127_4644190_1 TIGRFAM parallel beta-helix repeat (two copies) - - - 0.0000001673 64.0
DYD1_k127_4647138_0 Belongs to the DegT DnrJ EryC1 family - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004684 401.0
DYD1_k127_4647138_1 PFAM Glycosyl transferase family 2 - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004927 305.0
DYD1_k127_4647138_2 Catalyzes the formation of UDP-glucose, from UTP and glucose 1-phosphate K00966,K16881 GO:0000166,GO:0001882,GO:0001884,GO:0002134,GO:0003674,GO:0003824,GO:0003983,GO:0005488,GO:0006011,GO:0006139,GO:0006725,GO:0006793,GO:0006807,GO:0008150,GO:0008152,GO:0009225,GO:0009987,GO:0016740,GO:0016772,GO:0016779,GO:0019103,GO:0032549,GO:0032551,GO:0032553,GO:0032557,GO:0034641,GO:0036094,GO:0043167,GO:0043168,GO:0044237,GO:0044238,GO:0044281,GO:0046483,GO:0051748,GO:0055086,GO:0070569,GO:0071704,GO:0097159,GO:0097367,GO:1901135,GO:1901265,GO:1901360,GO:1901363 2.7.7.13,5.4.2.8 0.00000000000000000000000000000000007466 145.0
DYD1_k127_4647138_3 PFAM PIN domain - - - 0.0000000000000000000000000007615 117.0
DYD1_k127_4647138_4 CYTH K05873 - 4.6.1.1 0.000000000000000000001055 102.0
DYD1_k127_4647138_5 Antitoxin component of a toxin-antitoxin (TA) module - - - 0.0000000000000000634 82.0
DYD1_k127_4656872_0 UDP binding domain K02474,K13015 - 1.1.1.136 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007001 535.0
DYD1_k127_4656872_1 NAD(P)H-binding K01784,K02473 - 5.1.3.2,5.1.3.7 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001349 328.0
DYD1_k127_4656872_2 DNA repair enzyme that has both DNA N-glycosylase activity and AP-lyase activity. The DNA N-glycosylase activity releases various damaged pyrimidines from DNA by cleaving the N- glycosidic bond, leaving an AP (apurinic apyrimidinic) site. The AP-lyase activity cleaves the phosphodiester bond 3' to the AP site by a beta-elimination, leaving a 3'-terminal unsaturated sugar and a product with a terminal 5'-phosphate K10773 - 4.2.99.18 0.00000000000000000000000000000000000000000000000000000000000159 216.0
DYD1_k127_4657292_0 Beta-eliminating lyase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009785 405.0
DYD1_k127_4657292_1 Involved in the biosynthesis of lipid A, a phosphorylated glycolipid that anchors the lipopolysaccharide to the outer membrane of the cell K00677 - 2.3.1.129 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000007918 293.0
DYD1_k127_4657292_2 Oxidoreductase family, NAD-binding Rossmann fold - - - 0.00000000000000000000000000000000000000000000000000000000000000000007148 241.0
DYD1_k127_4657292_3 Sigma factor PP2C-like phosphatases K07315,K07680 - 2.7.13.3,3.1.3.3 0.00000000000000000000000000000000000002859 163.0
DYD1_k127_4657292_4 Involved in unsaturated fatty acids biosynthesis. Catalyzes the dehydration of short chain beta-hydroxyacyl-ACPs and long chain saturated and unsaturated beta-hydroxyacyl-ACPs K02372 - 4.2.1.59 0.00000000000000000001114 93.0
DYD1_k127_4673454_0 Histidine kinase - - - 0.00000000000006047 85.0
DYD1_k127_4680745_0 - K12065 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001693 321.0
DYD1_k127_4680745_1 FMN binding K03612 GO:0005575,GO:0005623,GO:0005886,GO:0016020,GO:0044464,GO:0071944 - 0.000000000000000000000000000003694 126.0
DYD1_k127_4684876_0 Catalyzes the phosphorylation of pantothenate (Pan), the first step in CoA biosynthesis K03525 GO:0005575,GO:0005623,GO:0005886,GO:0016020,GO:0044464,GO:0071944 2.7.1.33 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000004952 299.0
DYD1_k127_4684876_1 biotin acetyl-CoA-carboxylase ligase K03524 - 6.3.4.15 0.00000000000000000000000000000000000003184 152.0
DYD1_k127_4684876_2 DNA internalization-related competence protein ComEC Rec2 K02238 - - 0.00000000000000003765 93.0
DYD1_k127_4684876_3 outer membrane autotransporter barrel domain protein - - - 0.0000000000002596 78.0
DYD1_k127_469566_0 PFAM Ppx GppA phosphatase K01524 - 3.6.1.11,3.6.1.40 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002058 339.0
DYD1_k127_469566_1 PFAM glycosyl transferase family 39 - - - 0.0000000000000000000000000142 115.0
DYD1_k127_4735385_0 Catalyzes the reversible hydration of fumarate to (S)- malate K01676 - 4.2.1.2 1.124e-278 863.0
DYD1_k127_4735385_1 Serine carboxypeptidase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001084 610.0
DYD1_k127_4735385_2 Catalyzes the irreversible transfer of a propylamine group from the amino donor S-adenosylmethioninamine (decarboxy- AdoMet) to putrescine (1,4-diaminobutane) to yield spermidine - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000008215 299.0
DYD1_k127_4735385_3 Protein of unknown function (DUF423) - - - 0.000000000000000000000000000002652 124.0
DYD1_k127_473575_0 Prokaryotic cytochrome b561 - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000177 557.0
DYD1_k127_473575_1 PFAM blue (type 1) copper domain protein - - - 0.000000000000001438 83.0
DYD1_k127_4741744_0 AIR synthase related protein, N-terminal domain K01933,K11788 GO:0003674,GO:0003824,GO:0004641,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006139,GO:0006163,GO:0006164,GO:0006725,GO:0006753,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009117,GO:0009150,GO:0009152,GO:0009165,GO:0009259,GO:0009260,GO:0009987,GO:0016874,GO:0016879,GO:0016882,GO:0018130,GO:0019438,GO:0019637,GO:0019693,GO:0034641,GO:0034654,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0044424,GO:0044444,GO:0044464,GO:0046390,GO:0046483,GO:0055086,GO:0071704,GO:0072521,GO:0072522,GO:0090407,GO:1901135,GO:1901137,GO:1901293,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576 6.3.3.1,6.3.4.13 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003271 349.0
DYD1_k127_4741744_1 ATPases associated with a variety of cellular activities K01990 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000001213 276.0
DYD1_k127_4741744_2 Transferrin receptor-like dimerisation domain K01301 - 3.4.17.21 0.0000000000000000000000000000000000000000000000000000000000000000001211 249.0
DYD1_k127_4741744_3 peptidyl-tyrosine sulfation - - - 0.000000000000000000000000000000000000000000000000000008329 199.0
DYD1_k127_4741744_4 - - - - 0.000000000000000000000000000000000000000000000002771 184.0
DYD1_k127_4741744_5 Glycosyltransferase like family 2 K07011 - - 0.00000000000000000000000000000000000000000001042 173.0
DYD1_k127_4741744_6 Two component, sigma54 specific, transcriptional regulator, Fis family - - - 0.000000000000000000000001449 106.0
DYD1_k127_4742011_0 Cystathionine beta-synthase K01697 GO:0003674,GO:0005488,GO:0005575,GO:0005576,GO:0005618,GO:0005622,GO:0005623,GO:0005737,GO:0005886,GO:0008144,GO:0016020,GO:0019842,GO:0030170,GO:0030312,GO:0036094,GO:0043167,GO:0043168,GO:0044424,GO:0044464,GO:0048037,GO:0050662,GO:0070279,GO:0071944,GO:0097159,GO:1901363 4.2.1.22 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004134 361.0
DYD1_k127_4742011_1 S-adenosyl-l-methionine hydroxide adenosyltransferase K22205 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003258 326.0
DYD1_k127_4742011_2 Protein of unknown function (DUF1579) - - - 0.000000000000000000000000000000000000005977 156.0
DYD1_k127_4742011_3 Belongs to the peptidase S26 family K03100 - 3.4.21.89 0.0000000000000000000000000000002145 126.0
DYD1_k127_4742011_4 Transcriptional regulator - - - 0.0000008828 58.0
DYD1_k127_4742011_5 - - - - 0.000005437 53.0
DYD1_k127_4753722_0 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus K00341 - 1.6.5.3 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001538 515.0
DYD1_k127_4753722_1 NADH-quinone oxidoreductase K00334 - 1.6.5.3 0.0000000000000000000000000000000000000000000003279 171.0
DYD1_k127_4753722_2 NADH-ubiquinone/plastoquinone oxidoreductase chain 4L K00340,K05576 - 1.6.5.3 0.000000000000000000000000002823 114.0
DYD1_k127_4753722_3 Belongs to the complex I subunit 6 family K00339 - 1.6.5.3 0.000000000000000000000000022 114.0
DYD1_k127_476296_0 serine threonine protein kinase K12132 - 2.7.11.1 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000436 306.0
DYD1_k127_476296_1 Histidine kinase - - - 0.00000000000000000000000000000000000000000000000000000000000000000128 240.0
DYD1_k127_476296_2 LytTr DNA-binding domain K02477 - - 0.000000000000000000000000000000000000000000000000000000000028 215.0
DYD1_k127_476296_3 Involved in the tonB-independent uptake of proteins - - - 0.000000000000000000000000000000000000000000003322 191.0
DYD1_k127_476296_4 Alcohol dehydrogenase GroES-like domain - - - 0.0000000000000000000000000000000515 130.0
DYD1_k127_476296_5 Peptidase, M16 K07263 - - 0.0000000000000000000000000000005194 135.0
DYD1_k127_476296_6 Regulatory protein ArsR K03892 - - 0.000000000000000000000198 100.0
DYD1_k127_476296_7 Serine threonine protein kinase K12132 - 2.7.11.1 0.000000000000000000002481 97.0
DYD1_k127_4806388_0 serine-type peptidase activity K01303 - 3.4.19.1 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002349 338.0
DYD1_k127_4806388_1 PFAM small multidrug resistance protein K03297,K11741 - - 0.0000000000000000000000000000000009118 132.0
DYD1_k127_4806388_3 Outer membrane protein, OMP85 family K07277 - - 0.000000000004836 78.0
DYD1_k127_4810717_0 Belongs to the sodium solute symporter (SSF) (TC 2.A.21) family K11928 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000404 473.0
DYD1_k127_4815404_0 Evidence 4 Homologs of previously reported genes of - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003721 368.0
DYD1_k127_4815404_1 ligase activity - - - 0.000000000000000000000000000000000000000000000001044 179.0
DYD1_k127_4815404_2 Sigma factor PP2C-like phosphatases K07315 - 3.1.3.3 0.00000000000000000000000000006755 121.0
DYD1_k127_4824880_0 Part of the Sec protein translocase complex. Interacts with the SecYEG preprotein conducting channel. Has a central role in coupling the hydrolysis of ATP to the transfer of proteins into and across the cell membrane, serving as an ATP-driven molecular motor driving the stepwise translocation of polypeptide chains across the membrane K03070 GO:0000166,GO:0003674,GO:0003824,GO:0005215,GO:0005488,GO:0005524,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005886,GO:0005887,GO:0006810,GO:0008104,GO:0008144,GO:0008150,GO:0008320,GO:0008565,GO:0015031,GO:0015399,GO:0015405,GO:0015440,GO:0015450,GO:0015462,GO:0015833,GO:0016020,GO:0016021,GO:0016462,GO:0016787,GO:0016817,GO:0016818,GO:0016887,GO:0017076,GO:0017111,GO:0022804,GO:0022857,GO:0022884,GO:0030554,GO:0031224,GO:0031226,GO:0031522,GO:0032553,GO:0032555,GO:0032559,GO:0032991,GO:0033036,GO:0033220,GO:0035639,GO:0036094,GO:0042623,GO:0042626,GO:0042886,GO:0042887,GO:0043167,GO:0043168,GO:0043492,GO:0043952,GO:0044424,GO:0044425,GO:0044444,GO:0044459,GO:0044464,GO:0045184,GO:0051179,GO:0051234,GO:0055085,GO:0071702,GO:0071705,GO:0071806,GO:0071944,GO:0097159,GO:0097367,GO:1901265,GO:1901363,GO:1904680 - 0.0 1062.0
DYD1_k127_4824880_1 - - - - 0.00000000000000000001318 97.0
DYD1_k127_4824880_2 SPFH domain-Band 7 family - - - 0.000000008464 58.0
DYD1_k127_4824880_3 Catalyzes the conversion of inosine 5'-phosphate (IMP) to xanthosine 5'-phosphate (XMP), the first committed and rate- limiting step in the de novo synthesis of guanine nucleotides, and therefore plays an important role in the regulation of cell growth - - - 0.0000009366 52.0
DYD1_k127_4870086_0 Belongs to the PdxA family - - - 0.000000000000000000000000000000000000000000000000000000000000000000000008345 254.0
DYD1_k127_4870086_1 positive regulation of translation, ncRNA-mediated K03666 - - 0.00000000000000000000000000000004947 130.0
DYD1_k127_4870086_2 Could be a nuclease involved in processing of the 5'-end of pre-16S rRNA K07447 - - 0.00000000000000000000000001583 116.0
DYD1_k127_4870640_0 Cobyrinic acid ac-diamide synthase K03496 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005538 310.0
DYD1_k127_4870640_1 helix_turn_helix, Lux Regulon - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000003961 264.0
DYD1_k127_4870640_2 Diguanylate cyclase K21084 - 2.7.7.65 0.00000000000000000000000000000000000000000000000000000000000000000000001235 257.0
DYD1_k127_4870640_3 chromosome segregation K03497 - - 0.0000000000000000000000000000000000000000000000000000000008947 210.0
DYD1_k127_4870640_4 Calcineurin-like phosphoesterase K03269 GO:0003674,GO:0003824,GO:0005488,GO:0005575,GO:0005623,GO:0005886,GO:0005975,GO:0006629,GO:0006643,GO:0006644,GO:0006664,GO:0006793,GO:0006796,GO:0008150,GO:0008152,GO:0008610,GO:0008654,GO:0008758,GO:0009058,GO:0009245,GO:0009247,GO:0009311,GO:0009312,GO:0009987,GO:0016020,GO:0016051,GO:0016462,GO:0016787,GO:0016817,GO:0016818,GO:0019637,GO:0019897,GO:0019898,GO:0030145,GO:0043167,GO:0043169,GO:0044237,GO:0044238,GO:0044249,GO:0044255,GO:0044425,GO:0044459,GO:0044464,GO:0046467,GO:0046493,GO:0046872,GO:0046914,GO:0071704,GO:0071944,GO:0090407,GO:1901135,GO:1901137,GO:1901269,GO:1901271,GO:1901576,GO:1903509 3.6.1.54 0.000000000000000000000000000000000004523 146.0
DYD1_k127_4870640_5 Calcium/calmodulin dependent protein kinase II association domain - - - 0.00000000000000000000000000003572 123.0
DYD1_k127_4870640_6 Belongs to the anti-sigma-factor antagonist family K04749 - - 0.0000000000000001034 84.0
DYD1_k127_4890125_0 transposase gene. There are two copies of the ISChy3 element in this genome - - - 0.000000313 55.0
DYD1_k127_4890125_1 phage replisome - - - 0.00005057 48.0
DYD1_k127_489787_0 - - - - 0.0000000000000000000000000000000000000000000000000000000000003935 217.0
DYD1_k127_489787_1 LytTr DNA-binding domain - - - 0.0000000000000000000000000000000000000000000000000000000653 201.0
DYD1_k127_489787_2 racemase activity, acting on amino acids and derivatives K01779 - 5.1.1.13 0.000000000000000000000000000000000000000000000000000000876 196.0
DYD1_k127_4901776_0 Ornithine cyclodeaminase/mu-crystallin family K01750 - 4.3.1.12 0.00000000000000000000000000000000000000000000000000000000000131 222.0
DYD1_k127_4901776_1 Glycosyl hydrolase 36 superfamily, catalytic domain K13688,K18786 - 2.4.1.321 0.000000000000000000000000000000000000000000000000000003033 196.0
DYD1_k127_4901776_2 PepSY-associated TM region - - - 0.000003583 49.0
DYD1_k127_490972_0 Hydrolase - - - 0.0 1206.0
DYD1_k127_4917339_0 Protein kinase domain K12132 - 2.7.11.1 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001242 582.0
DYD1_k127_4917339_1 DNA-templated transcription, initiation K02405 - - 0.0000000000000000000000000000000000000000000000000000000001799 208.0
DYD1_k127_4917339_2 Periplasmic copper-binding protein (NosD) - - - 0.00005226 54.0
DYD1_k127_4924373_0 Catalyzes the isomerization between 2-isopropylmalate and 3-isopropylmalate, via the formation of 2-isopropylmaleate K01703 - 4.2.1.33,4.2.1.35 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007735 503.0
DYD1_k127_4924373_1 Belongs to the alpha-IPM synthase homocitrate synthase family K01649,K09011 - 2.3.1.182,2.3.3.13 0.00000000000000000000000000000000000000000000000004153 193.0
DYD1_k127_4924373_2 Flavin reductase like domain - - - 0.00000000000000000000000000000000000000000000000004204 185.0
DYD1_k127_4924373_3 Belongs to the Glu Leu Phe Val dehydrogenases family K00260,K00261,K00262 GO:0000166,GO:0003674,GO:0003824,GO:0004352,GO:0004353,GO:0004354,GO:0005488,GO:0006082,GO:0006103,GO:0006520,GO:0006536,GO:0006807,GO:0008150,GO:0008152,GO:0009064,GO:0009987,GO:0016043,GO:0016491,GO:0016638,GO:0016639,GO:0019752,GO:0022607,GO:0034214,GO:0036094,GO:0043167,GO:0043168,GO:0043436,GO:0043648,GO:0043933,GO:0044085,GO:0044237,GO:0044238,GO:0044281,GO:0048037,GO:0050661,GO:0050662,GO:0051186,GO:0051259,GO:0051287,GO:0055114,GO:0065003,GO:0070401,GO:0070402,GO:0070403,GO:0070404,GO:0071704,GO:0071840,GO:0097159,GO:1901265,GO:1901363,GO:1901564,GO:1901605 1.4.1.2,1.4.1.3,1.4.1.4 0.0000000000000004023 85.0
DYD1_k127_4924373_4 Threonine synthase K01733 - 4.2.3.1 0.00003043 56.0
DYD1_k127_4934517_0 serine threonine protein kinase K12132 - 2.7.11.1 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003323 318.0
DYD1_k127_4934517_1 PFAM glycosyl transferase group 1 - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000002223 297.0
DYD1_k127_4934517_2 PFAM glycosyl transferase group 1 - - - 0.0000000000000000000000000000000000000000000002866 184.0
DYD1_k127_4934517_3 Methionine biosynthesis protein MetW K18827 - 2.1.1.294,2.7.1.181 0.0000000006246 64.0
DYD1_k127_4941288_0 Glycosyltransferase like family 2 - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000001399 276.0
DYD1_k127_4941288_1 Inositol monophosphatase K01082,K01092 GO:0003674,GO:0003824,GO:0005975,GO:0006020,GO:0006066,GO:0006793,GO:0006796,GO:0007154,GO:0007165,GO:0008150,GO:0008152,GO:0008934,GO:0009056,GO:0009987,GO:0016311,GO:0016787,GO:0016788,GO:0016791,GO:0019637,GO:0019751,GO:0023052,GO:0042578,GO:0043647,GO:0044237,GO:0044238,GO:0044262,GO:0044281,GO:0044282,GO:0046164,GO:0046174,GO:0046434,GO:0046838,GO:0046855,GO:0050789,GO:0050794,GO:0050896,GO:0051716,GO:0052745,GO:0052834,GO:0065007,GO:0071545,GO:0071704,GO:1901575,GO:1901615,GO:1901616 3.1.3.25,3.1.3.7 0.0000000000000000000000000000000000000000000166 166.0
DYD1_k127_4993231_0 TIGRFAM Ammonium transporter K03320 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003961 496.0
DYD1_k127_4993231_1 Belongs to the P(II) protein family K04751,K04752 - - 0.00000000000000000000000000000000000000000000000131 175.0
DYD1_k127_4993231_2 DoxX K15977 - - 0.0000000000001171 78.0
DYD1_k127_4993231_3 glutamine synthetase K01915 GO:0001968,GO:0003674,GO:0003824,GO:0004356,GO:0005488,GO:0005515,GO:0005575,GO:0005576,GO:0005618,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005886,GO:0006082,GO:0006520,GO:0006541,GO:0006542,GO:0006807,GO:0008150,GO:0008152,GO:0008652,GO:0009058,GO:0009064,GO:0009084,GO:0009405,GO:0009605,GO:0009607,GO:0009893,GO:0009987,GO:0010468,GO:0010604,GO:0010628,GO:0010755,GO:0010756,GO:0010954,GO:0016020,GO:0016053,GO:0016211,GO:0016874,GO:0016879,GO:0016880,GO:0019222,GO:0019752,GO:0019899,GO:0020012,GO:0030162,GO:0030312,GO:0030682,GO:0031323,GO:0031325,GO:0032268,GO:0032270,GO:0035375,GO:0040007,GO:0043207,GO:0043436,GO:0044044,GO:0044237,GO:0044238,GO:0044249,GO:0044281,GO:0044283,GO:0044403,GO:0044413,GO:0044415,GO:0044419,GO:0044424,GO:0044444,GO:0044464,GO:0045862,GO:0046394,GO:0048518,GO:0048522,GO:0050789,GO:0050794,GO:0050896,GO:0051171,GO:0051173,GO:0051246,GO:0051247,GO:0051701,GO:0051704,GO:0051707,GO:0051805,GO:0051807,GO:0051832,GO:0051834,GO:0052173,GO:0052200,GO:0052564,GO:0052572,GO:0060255,GO:0065007,GO:0070613,GO:0071704,GO:0071944,GO:0075136,GO:0080090,GO:1901564,GO:1901566,GO:1901576,GO:1901605,GO:1901607,GO:1903317,GO:1903319 6.3.1.2 0.00000008851 56.0
DYD1_k127_4993264_0 gluconolactonase K01053 - 3.1.1.17 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001514 374.0
DYD1_k127_4993264_1 von Willebrand factor, type A K07114 - - 0.0000007406 56.0
DYD1_k127_4996673_0 Involved in the tonB-independent uptake of proteins - - - 0.00000000000000000000000000000000000000000000000000000000000000000004535 238.0
DYD1_k127_4996673_1 Protein tyrosine kinase - - - 0.00000000000114 74.0
DYD1_k127_4996673_2 Toxic component of a toxin-antitoxin (TA) module. An RNase - - - 0.00000000001003 68.0
DYD1_k127_4998294_0 NMT1/THI5 like - - - 0.0000000000000000000000000000000000000000000003143 187.0
DYD1_k127_4998294_2 ATPase activity - - - 0.0000000000000004065 83.0
DYD1_k127_5007481_0 Transglycosylase K05365 - 2.4.1.129,3.4.16.4 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002381 544.0
DYD1_k127_501221_0 protein containing a von Willebrand factor type A (vWA) domain K07114 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006652 389.0
DYD1_k127_501221_1 helix_turn_helix gluconate operon transcriptional repressor K07978 - - 0.00000000000000000000000000000000000000000000000000000000003398 216.0
DYD1_k127_501221_2 Sigma-70, region 4 K03088 - - 0.0000000000000000000000000000000000000000005392 165.0
DYD1_k127_501221_3 fatty acid desaturase - - - 0.0000000000000004737 88.0
DYD1_k127_501221_4 PFAM GH3 auxin-responsive promoter - - - 0.00000000007944 75.0
DYD1_k127_501221_5 hydrolase K07025 - - 0.0007191 49.0
DYD1_k127_5016885_0 cAMP biosynthetic process K08282,K12132 - 2.7.11.1 6.743e-225 723.0
DYD1_k127_5016885_1 Peptidase dimerisation domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001018 467.0
DYD1_k127_5041712_0 Transcriptional regulatory protein, C terminal K02483 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009681 303.0
DYD1_k127_5041712_1 Integral membrane sensor signal transduction histidine kinase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000006216 293.0
DYD1_k127_5049772_0 Catalyzes the synthesis of GMP from XMP K01951 GO:0003674,GO:0003824,GO:0003921,GO:0003922,GO:0006139,GO:0006163,GO:0006164,GO:0006177,GO:0006725,GO:0006753,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009116,GO:0009117,GO:0009119,GO:0009123,GO:0009124,GO:0009126,GO:0009127,GO:0009150,GO:0009152,GO:0009156,GO:0009161,GO:0009163,GO:0009165,GO:0009167,GO:0009168,GO:0009259,GO:0009260,GO:0009987,GO:0016874,GO:0016879,GO:0016884,GO:0018130,GO:0019438,GO:0019637,GO:0019693,GO:0034404,GO:0034641,GO:0034654,GO:0042278,GO:0042451,GO:0042455,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0044283,GO:0046037,GO:0046128,GO:0046129,GO:0046390,GO:0046483,GO:0055086,GO:0071704,GO:0072521,GO:0072522,GO:0090407,GO:1901068,GO:1901070,GO:1901135,GO:1901137,GO:1901293,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576,GO:1901657,GO:1901659 6.3.5.2 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000198 587.0
DYD1_k127_5049772_1 TonB-dependent Receptor Plug Domain K16092 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000004844 281.0
DYD1_k127_5049772_2 DNA polymerase alpha chain like domain K02337 - 2.7.7.7 0.0000000000000000000000000000006155 123.0
DYD1_k127_5057718_0 oxidoreductase activity, acting on CH-OH group of donors - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000008261 282.0
DYD1_k127_5057718_1 PFAM thioesterase superfamily K07107 - - 0.00000000000000000000000000000000000000000000001822 175.0
DYD1_k127_5057718_2 Glycosyl transferase family 2 - - - 0.000000000000009597 78.0
DYD1_k127_5057718_3 FabA-like domain - - - 0.0000001955 62.0
DYD1_k127_5063743_0 Evidence 3 Function proposed based on presence of conserved amino acid motif, structural feature or limited homology - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000346 311.0
DYD1_k127_5063743_1 helix_turn_helix, Lux Regulon - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000001833 261.0
DYD1_k127_5063743_2 helix_turn_helix, Lux Regulon - - - 0.000000000000000000000000001216 120.0
DYD1_k127_5066344_0 Histidine kinase K07646 - 2.7.13.3 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000198 307.0
DYD1_k127_5066344_1 response regulator, receiver K07667 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000006384 267.0
DYD1_k127_5066510_0 lysine biosynthetic process via aminoadipic acid - - - 1.505e-226 721.0
DYD1_k127_5070283_0 Catalyzes the reduction of 1-pyrroline-5-carboxylate (PCA) to L-proline K00286 - 1.5.1.2 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008645 344.0
DYD1_k127_5070283_1 PFAM Sugar (and other) transporter K08368,K08369 - - 0.0000000000000000000000000000000000000000000000000000000000000007956 222.0
DYD1_k127_5070283_2 PFAM glycosyl transferase group 1 - - - 0.000000000000000000000000000000000000000000000000000000000000005135 229.0
DYD1_k127_5070283_3 Stage II sporulation protein E K07315 - 3.1.3.3 0.00000000000000000000000000000000000000000000000000008325 209.0
DYD1_k127_5070283_4 Domain of unknown function (DUF1844) - - - 0.00000000000000000207 90.0
DYD1_k127_5084381_0 neurotransmitter:sodium symporter activity K03308,K03466 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004204 543.0
DYD1_k127_5084381_1 Thiamine biosynthesis protein - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005117 321.0
DYD1_k127_5092519_0 4-amino-4-deoxy-L-arabinose transferase and related glycosyltransferases of PMT family - - - 0.00000000000000000000000000000000000000000000000001486 201.0
DYD1_k127_5092519_1 Sulfatase - - - 0.000000000000000000000000000000000000248 156.0
DYD1_k127_509496_0 Transglutaminase/protease-like homologues - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000001412 291.0
DYD1_k127_509496_1 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD K03768 - 5.2.1.8 0.000000000000000000001853 98.0
DYD1_k127_509496_2 Protein of unknown function DUF58 - - - 0.0000000006558 69.0
DYD1_k127_5095347_0 NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient K00333 - 1.6.5.3 1.655e-321 1002.0
DYD1_k127_5095347_1 NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient K00338,K03615,K05580 - 1.6.5.3 0.00000000000000000000000000000000000000000000000000000000000003223 220.0
DYD1_k127_5095347_2 PFAM EAL domain - - - 0.00000000000000000000000000000000000000000000000000006507 202.0
DYD1_k127_5112174_0 PFAM GlcNAc-PI de-N-acetylase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002839 491.0
DYD1_k127_5112174_1 translation release factor activity - - - 0.0000000000000000000000000000000000000000007455 162.0
DYD1_k127_511239_0 - - - - 0.000000000000000000000000000000000000000000000000000000001489 209.0
DYD1_k127_511239_1 Glycosyl hydrolases family 15 - - - 0.0000000000000000000000000000000000000000000000000004575 186.0
DYD1_k127_5117521_0 SMART Elongator protein 3 MiaB NifB - - - 1.205e-228 719.0
DYD1_k127_5117521_1 WD40 domain protein beta Propeller K08884,K12132 - 2.7.11.1 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000003983 299.0
DYD1_k127_5120553_0 A type II topoisomerase that negatively supercoils closed circular double-stranded (ds) DNA in an ATP-dependent manner to modulate DNA topology and maintain chromosomes in an underwound state. Negative supercoiling favors strand separation, and DNA replication, transcription, recombination and repair, all of which involve strand separation. Also able to catalyze the interconversion of other topological isomers of dsDNA rings, including catenanes and knotted rings. Type II topoisomerases break and join 2 DNA strands simultaneously in an ATP-dependent manner K02470 - 5.99.1.3 8.735e-254 803.0
DYD1_k127_5120553_1 Confers DNA tethering and processivity to DNA polymerases and other proteins. Acts as a clamp, forming a ring around DNA (a reaction catalyzed by the clamp-loading complex) which diffuses in an ATP-independent manner freely and bidirectionally along dsDNA. Initially characterized for its ability to contact the catalytic subunit of DNA polymerase III (Pol III), a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria K02338 - 2.7.7.7 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000206 287.0
DYD1_k127_5120553_2 it binds specifically double-stranded DNA at a 9 bp consensus (dnaA box) 5'-TTATC CA A CA A-3'. DnaA binds to ATP and to acidic phospholipids K02313 - - 0.00000000000000000000000000000000000000000000000000000001245 202.0
DYD1_k127_5120553_3 it is required for DNA replication and normal SOS inducibility. RecF binds preferentially to single-stranded, linear DNA. It also seems to bind ATP K03629 GO:0000731,GO:0005575,GO:0005622,GO:0005623,GO:0006139,GO:0006259,GO:0006281,GO:0006302,GO:0006725,GO:0006807,GO:0006950,GO:0006974,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009295,GO:0009987,GO:0018130,GO:0019438,GO:0033554,GO:0034641,GO:0034645,GO:0034654,GO:0043170,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043590,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044271,GO:0044424,GO:0044464,GO:0046483,GO:0050896,GO:0051716,GO:0071704,GO:0071897,GO:0090304,GO:1901360,GO:1901362,GO:1901576 - 0.0000000000000000000000000000000000000000000000000002877 198.0
DYD1_k127_5127762_0 NAD-dependent epimerase dehydratase K01710,K08678 - 4.1.1.35,4.2.1.46 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002468 378.0
DYD1_k127_5127762_1 Belongs to the DegT DnrJ EryC1 family - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002268 339.0
DYD1_k127_5127762_2 Hexapeptide repeat of succinyl-transferase K13018 - 2.3.1.201 0.0000000000000000000000000000000000000000000001996 176.0
DYD1_k127_5127762_3 YCII-related domain - - - 0.00000000000000000000000000000000000001039 147.0
DYD1_k127_5127762_4 Glycosyl transferase, family 2 K00721 - 2.4.1.83 0.00000000000000000000000000000000005842 143.0
DYD1_k127_5127762_5 Cupin 2, conserved barrel domain protein - - - 0.00000000000000000000282 98.0
DYD1_k127_5170448_0 Beta-lactamase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000005013 289.0
DYD1_k127_5170448_1 AraC-like ligand binding domain - - - 0.000000000000000000000000000000000000006588 153.0
DYD1_k127_5170448_2 DNA-templated transcription, initiation K03088 - - 0.0000000000000000000000000002946 122.0
DYD1_k127_5177244_0 Glycosyltransferase like family 2 - - - 0.0000000000000000000000000000000000000000000000006766 179.0
DYD1_k127_5177244_1 Dolichyl-phosphate-mannose-protein mannosyltransferase - - - 0.00000000007701 74.0
DYD1_k127_5178754_0 Sulfatase - - - 0.00000000000000000000000000000000001399 155.0
DYD1_k127_5178754_2 Repeat domain in Vibrio, Colwellia, Bradyrhizobium and Shewanella - - - 0.0002582 46.0
DYD1_k127_5209992_0 Membrane dipeptidase (Peptidase family M19) K01273 - 3.4.13.19 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004832 452.0
DYD1_k127_5209992_1 Cleaves type-4 fimbrial leader sequence and methylates the N-terminal (generally Phe) residue K02654 - 3.4.23.43 0.000000000000000000000000000000000000000000000000000000000000000003459 234.0
DYD1_k127_5221419_0 Amidohydrolase family - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006206 334.0
DYD1_k127_5221419_1 Amidohydrolase family - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000002384 277.0
DYD1_k127_5221734_0 4-alpha-glucanotransferase K00705 - 2.4.1.25 3.951e-205 649.0
DYD1_k127_5221734_1 aminopeptidase activity - - - 0.000000000000000000000000000000000000000000000000001845 193.0
DYD1_k127_5227041_0 glycosyl hydrolase, BNR repeat-containing protein - - - 0.000000000000000000000000000000000000000000000000000000000001342 237.0
DYD1_k127_5227041_1 glycoside hydrolase family 81 - - - 0.00000000004115 77.0
DYD1_k127_522809_0 Protein tyrosine kinase K12132 - 2.7.11.1 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000115 300.0
DYD1_k127_522809_1 Catalyzes the NADPH-dependent reduction of 7-cyano-7- deazaguanine (preQ0) to 7-aminomethyl-7-deazaguanine (preQ1) K09457 - 1.7.1.13 0.0000000000000000000000000000000000000000000000000000003061 196.0
DYD1_k127_522809_2 Smr domain - - - 0.0000000000000000000002158 100.0
DYD1_k127_522809_3 PFAM blue (type 1) copper domain protein - - - 0.00000000000000002631 85.0
DYD1_k127_523106_0 Major Facilitator Superfamily - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005645 355.0
DYD1_k127_523106_1 abc-type fe3 -hydroxamate transport system, periplasmic component K02016 - - 0.0000000000000000000000000000000000000000000000000007375 193.0
DYD1_k127_523106_2 AhpC/TSA family - - - 0.000000000000000000000000000000008121 133.0
DYD1_k127_523106_3 SpoVT / AbrB like domain - - - 0.00000000000000000004354 94.0
DYD1_k127_5231817_0 Catalyzes the conversion of acetate into acetyl-CoA (AcCoA), an essential intermediate at the junction of anabolic and catabolic pathways. AcsA undergoes a two-step reaction. In the first half reaction, AcsA combines acetate with ATP to form acetyl-adenylate (AcAMP) intermediate. In the second half reaction, it can then transfer the acetyl group from AcAMP to the sulfhydryl group of CoA, forming the product AcCoA K01895 - 6.2.1.1 6.222e-222 695.0
DYD1_k127_5231817_1 glyoxalase bleomycin resistance protein dioxygenase - - - 0.00000000000000000000000000000000000000001735 156.0
DYD1_k127_5231817_2 YHS domain K06966 - 3.2.2.10 0.00000000000000000000000000000003111 134.0
DYD1_k127_5231817_3 Putative S-adenosyl-L-methionine-dependent methyltransferase - - - 0.000005903 57.0
DYD1_k127_5239548_0 thyroxine 5'-deiodinase activity K01562 GO:0003674,GO:0003824,GO:0004800,GO:0005488,GO:0005575,GO:0005623,GO:0005886,GO:0006575,GO:0006590,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0008430,GO:0009987,GO:0010817,GO:0016020,GO:0016491,GO:0018958,GO:0042403,GO:0042445,GO:0044237,GO:0044464,GO:0055114,GO:0065007,GO:0065008,GO:0071704,GO:0071944,GO:1901360,GO:1901564,GO:1901615 1.21.99.4 0.0000000000000000000000000007448 117.0
DYD1_k127_5251083_0 In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity K02335 - 2.7.7.7 9.927e-216 700.0
DYD1_k127_5251083_1 it binds specifically double-stranded DNA at a 9 bp consensus (dnaA box) 5'-TTATC CA A CA A-3'. DnaA binds to ATP and to acidic phospholipids K02313 GO:0003674,GO:0003676,GO:0003677,GO:0003688,GO:0003690,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005886,GO:0006139,GO:0006259,GO:0006260,GO:0006261,GO:0006270,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0016020,GO:0034641,GO:0034645,GO:0042802,GO:0043170,GO:0043565,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044424,GO:0044464,GO:0046483,GO:0071704,GO:0071944,GO:0090304,GO:0097159,GO:1901360,GO:1901363,GO:1901576,GO:1990837 - 0.000000000000000000000000000000000000000000000000000000000000000000000001363 253.0
DYD1_k127_5251083_2 PFAM aminotransferase, class I K10907 - - 0.00000000000000000000000000000000000000000000000000000246 195.0
DYD1_k127_5251083_3 Metallo-beta-lactamase superfamily - - - 0.0000000000000000000000000000000000000000000000000000867 194.0
DYD1_k127_5252641_0 Elongator protein 3, MiaB family, Radical SAM K06937 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002583 605.0
DYD1_k127_5252641_1 Enoyl-(Acyl carrier protein) reductase K00034,K03366 - 1.1.1.304,1.1.1.47,1.1.1.76 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000292 305.0
DYD1_k127_5252641_2 CDP-alcohol phosphatidyltransferase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000007722 246.0
DYD1_k127_5252641_3 Porphyromonas-type peptidyl-arginine deiminase K10536 - 3.5.3.12 0.000000000000000000000000000000000000000000000001452 191.0
DYD1_k127_5252641_4 Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released K03086,K03089 - - 0.00000009578 55.0
DYD1_k127_5252641_5 Dehydrogenase - - - 0.00001369 49.0
DYD1_k127_5256202_0 PFAM CBS domain K03699 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003311 432.0
DYD1_k127_5256202_1 ADP-ribosylglycohydrolase K05521 - 3.2.2.24 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001296 325.0
DYD1_k127_5256202_2 PFAM Methyltransferase type 11 - - - 0.0000000000000166 83.0
DYD1_k127_5267067_0 Belongs to the FPG family K10563 - 3.2.2.23,4.2.99.18 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003059 392.0
DYD1_k127_5267067_1 Protein of unknown function (DUF1203) - - - 0.0000000000000000000000000000000000000000000005128 170.0
DYD1_k127_5267067_2 Doxx family K15977 - - 0.00000000000000000000000000000000000000003401 158.0
DYD1_k127_5267067_3 Transglycosylase SLT domain - - - 0.000000000000000000000000000000000000009497 156.0
DYD1_k127_5267067_4 Protein kinase domain K12132 - 2.7.11.1 0.000000003017 59.0
DYD1_k127_5281848_0 radical SAM domain protein - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001675 617.0
DYD1_k127_5281848_1 fatty acid desaturase K00507 - 1.14.19.1 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000107 323.0
DYD1_k127_5281848_2 DHHA1 domain K06881 - 3.1.13.3,3.1.3.7 0.000000000000000000000000000000000000000002244 166.0
DYD1_k127_5281848_3 peptidase activity - - - 0.00000000000000000155 92.0
DYD1_k127_5295495_0 Belongs to the 5-formyltetrahydrofolate cyclo-ligase family - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002425 518.0
DYD1_k127_5295495_1 ABC transporter K06147 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003211 472.0
DYD1_k127_5295495_2 SprT homologues. - GO:0000278,GO:0000731,GO:0001674,GO:0001940,GO:0003674,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005634,GO:0005654,GO:0005694,GO:0006139,GO:0006259,GO:0006281,GO:0006301,GO:0006725,GO:0006807,GO:0006950,GO:0006974,GO:0007049,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009314,GO:0009411,GO:0009416,GO:0009628,GO:0009650,GO:0009893,GO:0009987,GO:0010604,GO:0016604,GO:0016607,GO:0018130,GO:0019222,GO:0019438,GO:0019985,GO:0031323,GO:0031325,GO:0031396,GO:0031398,GO:0031399,GO:0031401,GO:0031593,GO:0031974,GO:0031981,GO:0032182,GO:0032268,GO:0032270,GO:0033554,GO:0034641,GO:0034645,GO:0034654,GO:0042585,GO:0043073,GO:0043130,GO:0043170,GO:0043226,GO:0043227,GO:0043228,GO:0043229,GO:0043231,GO:0043232,GO:0043233,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044271,GO:0044422,GO:0044424,GO:0044428,GO:0044446,GO:0044451,GO:0044464,GO:0045120,GO:0046483,GO:0048518,GO:0048522,GO:0050789,GO:0050794,GO:0050896,GO:0051171,GO:0051173,GO:0051246,GO:0051247,GO:0051716,GO:0060255,GO:0065007,GO:0070013,GO:0070530,GO:0070987,GO:0071704,GO:0071897,GO:0080090,GO:0090304,GO:0140030,GO:1901360,GO:1901362,GO:1901576,GO:1903320,GO:1903322 - 0.000004589 56.0
DYD1_k127_5310439_0 K COG5665 CCR4-NOT transcriptional regulation complex, NOT5 subunit - - - 0.00000000000000000000000000000000000000000000008587 183.0
DYD1_k127_5310439_1 lyase activity - - - 0.0000000000000001493 91.0
DYD1_k127_5310439_2 - - - - 0.0000000000006439 77.0
DYD1_k127_5310741_0 serine threonine protein kinase K08884,K12132 - 2.7.11.1 0.00000000000000000000000000000000000000000000001421 192.0
DYD1_k127_5343186_0 Surface antigen - - - 0.0000000000000000000000000007802 128.0
DYD1_k127_5343186_1 - - - - 0.000000000000003605 83.0
DYD1_k127_5343186_2 Glycosyl transferase family 2 - - - 0.0000001513 59.0
DYD1_k127_5345292_0 ADP-ribosylation factor family K06883 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000006901 291.0
DYD1_k127_5345292_1 PFAM Roadblock LC7 family protein - - - 0.0000000000000000000000000000000000000000000000000000000000009395 213.0
DYD1_k127_5345292_2 PFAM HhH-GPD superfamily base excision DNA repair protein K03575 - - 0.0000000000000000000000000000000000000000000000000000003523 207.0
DYD1_k127_5345292_3 Psort location Cytoplasmic, score - - - 0.0005521 52.0
DYD1_k127_5346195_0 PFAM Formiminotransferase K00603 - 2.1.2.5 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003567 370.0
DYD1_k127_5346195_1 Uroporphyrinogen decarboxylase (URO-D) K01599 - 4.1.1.37 0.000000000000000000000000000000000000000000000000000007802 202.0
DYD1_k127_5349607_0 Fumarate reductase flavoprotein C-term K00239 - 1.3.5.1,1.3.5.4 6.184e-301 931.0
DYD1_k127_5349607_1 membrane - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000523 384.0
DYD1_k127_5349607_2 Involved in the tonB-independent uptake of proteins K08884,K12132 - 2.7.11.1 0.0000000000000000000000000000000000000005218 155.0
DYD1_k127_5363307_0 PFAM peptidase S9B, dipeptidylpeptidase IV domain protein K03641 - - 0.000000000000000002396 97.0
DYD1_k127_5363307_1 Psort location CytoplasmicMembrane, score - - - 0.000000000000000002797 97.0
DYD1_k127_5363307_2 - - - - 0.000000000000005612 76.0
DYD1_k127_5374052_0 peptidase - - - 1.184e-202 653.0
DYD1_k127_5374052_1 PFAM Glucose Sorbosone dehydrogenase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005494 426.0
DYD1_k127_5374052_2 Trypsin - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007341 417.0
DYD1_k127_5374052_3 - - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000001007 269.0
DYD1_k127_5374052_4 dehydratase - - - 0.000000000000000000000000000000000000000000000000000000000000102 215.0
DYD1_k127_5378673_0 Catalyzes the oxidation of glucose 6-phosphate to 6- phosphogluconolactone K00036 - 1.1.1.363,1.1.1.49 3.013e-229 719.0
DYD1_k127_5378673_1 6-phosphogluconate dehydrogenase, C-terminal domain K00033 - 1.1.1.343,1.1.1.44 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001319 508.0
DYD1_k127_5378673_2 MerR HTH family regulatory protein - - - 0.0000000000000000004134 90.0
DYD1_k127_5378673_3 Domain of unknown function DUF11 - - - 0.00000000000000000146 93.0
DYD1_k127_5381217_0 Glycosyl transferases group 1 - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000488 358.0
DYD1_k127_5381217_1 Glycosyltransferase Family 4 - - - 0.00000000000000000000000000000000000000000000000000000000004866 219.0
DYD1_k127_5381217_2 Glycosyltransferase like family 2 K07011 - - 0.00000000000000000000000000000000000000002307 164.0
DYD1_k127_5381217_3 PFAM Glycosyl transferase, group 1 - - - 0.00000000000000000008285 93.0
DYD1_k127_5385124_0 Amidohydrolase family - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005904 472.0
DYD1_k127_5385124_1 Dolichyl-phosphate-mannose-protein mannosyltransferase - - - 0.00000000000000000000000000000000000000001654 173.0
DYD1_k127_5394192_0 Isocitrate/isopropylmalate dehydrogenase K00030 - 1.1.1.41 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001772 431.0
DYD1_k127_5394192_1 Presumably involved in the processing and regular turnover of intracellular proteins. Catalyzes the removal of unsubstituted N-terminal amino acids from various peptides K01255 - 3.4.11.1 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002773 389.0
DYD1_k127_5394192_2 NADH-ubiquinone oxidoreductase-F iron-sulfur binding region K00335 - 1.6.5.3 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002959 367.0
DYD1_k127_5394192_3 PFAM tRNA rRNA methyltransferase (SpoU) - - - 0.00000000000000000000000000000000000007183 153.0
DYD1_k127_5396360_0 PFAM D-aminoacylase, C-terminal region K06015 - 3.5.1.81 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000336 397.0
DYD1_k127_5396360_1 Histidine kinase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000001239 310.0
DYD1_k127_5396360_2 SnoaL-like domain - - - 0.0000000000000000000000000000000000000001424 155.0
DYD1_k127_5396360_3 Adenylyl- / guanylyl cyclase, catalytic domain K01768 - 4.6.1.1 0.00000000003209 68.0
DYD1_k127_539969_0 ABC transporter substrate binding protein - - - 0.0000000000000000000000000001807 125.0
DYD1_k127_539969_1 - - - - 0.0000001488 62.0
DYD1_k127_540735_0 Tetratricopeptide repeat - - - 0.0000000000000000000000000000000000000000000000000009303 195.0
DYD1_k127_540735_1 ABC transporter K01990 - - 0.00000000000000000000000000000000000000009566 162.0
DYD1_k127_540735_2 helix_turn_helix gluconate operon transcriptional repressor K07979 - - 0.0000000000004785 76.0
DYD1_k127_540735_3 - - - - 0.00000004055 62.0
DYD1_k127_5413426_0 Peptidase U62 modulator of DNA gyrase K03592 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003618 474.0
DYD1_k127_5413426_1 PFAM peptidase U62 modulator of DNA gyrase K03568 - - 0.000000000000000000000000000000000000000000000000000005906 191.0
DYD1_k127_5413426_2 FtsX-like permease family - - - 0.000000000000000000000000000000001597 134.0
DYD1_k127_5425202_0 helix_turn_helix, arabinose operon control protein - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006989 538.0
DYD1_k127_5425202_1 AMP-binding enzyme C-terminal domain K00666 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001461 379.0
DYD1_k127_5425202_2 helix_turn_helix, Lux Regulon - - - 0.000000000000000000000000004178 124.0
DYD1_k127_5425202_3 PFAM Mechanosensitive ion channel - - - 0.00000000003059 75.0
DYD1_k127_543193_0 Reversibly catalyzes the transfer of the carbamoyl group from carbamoyl phosphate (CP) to the N(epsilon) atom of ornithine (ORN) to produce L-citrulline K00611 GO:0000050,GO:0003674,GO:0003824,GO:0004585,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006082,GO:0006520,GO:0006525,GO:0006526,GO:0006591,GO:0006807,GO:0008150,GO:0008152,GO:0008652,GO:0009058,GO:0009064,GO:0009084,GO:0009987,GO:0016053,GO:0016740,GO:0016741,GO:0016743,GO:0019627,GO:0019752,GO:0034641,GO:0042450,GO:0043436,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0044283,GO:0044424,GO:0044464,GO:0046394,GO:0071704,GO:0071941,GO:1901564,GO:1901566,GO:1901576,GO:1901605,GO:1901607 2.1.3.3 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000857 381.0
DYD1_k127_543193_1 Amino acid kinase family K00926 GO:0003674,GO:0003824,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006082,GO:0006520,GO:0006525,GO:0006527,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0008804,GO:0009056,GO:0009063,GO:0009064,GO:0009065,GO:0009987,GO:0016054,GO:0016301,GO:0016310,GO:0016740,GO:0016772,GO:0016774,GO:0019546,GO:0019752,GO:0043436,GO:0044237,GO:0044238,GO:0044248,GO:0044281,GO:0044282,GO:0044424,GO:0044444,GO:0044464,GO:0046395,GO:0071704,GO:1901564,GO:1901565,GO:1901575,GO:1901605,GO:1901606 2.7.2.2 0.00000000000000000000000000000000009567 136.0
DYD1_k127_543193_2 Putative restriction endonuclease - - - 0.00000000000000000001571 99.0
DYD1_k127_5435999_0 Glutamine amidotransferases class-II K00764 - 2.4.2.14 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009006 580.0
DYD1_k127_5435999_1 Part of the phosphoribosylformylglycinamidine synthase complex involved in the purines biosynthetic pathway. Catalyzes the ATP-dependent conversion of formylglycinamide ribonucleotide (FGAR) and glutamine to yield formylglycinamidine ribonucleotide (FGAM) and glutamate. The FGAM synthase complex is composed of three subunits. PurQ produces an ammonia molecule by converting glutamine to glutamate. PurL transfers the ammonia molecule to FGAR to form FGAM in an ATP-dependent manner. PurS interacts with PurQ and PurL and is thought to assist in the transfer of the ammonia molecule from PurQ to PurL K01952 - 6.3.5.3 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000004374 297.0
DYD1_k127_5435999_2 Catalyzes the transfer of a formyl group from 10- formyltetrahydrofolate to 5-phospho-ribosyl-glycinamide (GAR), producing 5-phospho-ribosyl-N-formylglycinamide (FGAR) and tetrahydrofolate K11175 - 2.1.2.2 0.000000000000000000000000000000000000000000000000000000000000009401 222.0
DYD1_k127_5435999_3 Catalyzes the attachment of tyrosine to tRNA(Tyr) in a two-step reaction tyrosine is first activated by ATP to form Tyr- AMP and then transferred to the acceptor end of tRNA(Tyr) K01866 GO:0003674,GO:0003824,GO:0004812,GO:0004831,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006082,GO:0006139,GO:0006399,GO:0006520,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0009987,GO:0016070,GO:0016874,GO:0016875,GO:0019752,GO:0034641,GO:0034660,GO:0043038,GO:0043039,GO:0043170,GO:0043436,GO:0044237,GO:0044238,GO:0044281,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0071704,GO:0090304,GO:0140098,GO:0140101,GO:1901360,GO:1901564 6.1.1.1 0.000000000000000000001638 95.0
DYD1_k127_5442188_0 PFAM glutamine synthetase catalytic region K01915 - 6.3.1.2 5.472e-247 783.0
DYD1_k127_5442188_1 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001629 394.0
DYD1_k127_5442188_2 Methyladenine glycosylase K01246 - 3.2.2.20 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000559 278.0
DYD1_k127_5442188_3 snoRNA binding - - - 0.00003679 52.0
DYD1_k127_5458322_0 ABC-type antimicrobial peptide transport system, permease component K02004 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000267 277.0
DYD1_k127_5458322_1 PFAM Ubiquitin-conjugating - - - 0.000000000000000000000000000007584 124.0
DYD1_k127_5458322_2 PFAM Mov34 MPN PAD-1 family - - - 0.0000000000000007214 83.0
DYD1_k127_5458322_3 WXG100 protein secretion system (Wss), protein YukD - - - 0.000000000001744 72.0
DYD1_k127_5469259_0 D-fructose-1,6-bisphosphate 1-phosphohydrolase class 3 K04041 - 3.1.3.11 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007844 331.0
DYD1_k127_5469259_1 Protein tyrosine kinase K12132 - 2.7.11.1 0.0000000000000000000000000000000000000000000000000000002168 224.0
DYD1_k127_5469259_2 Tetratricopeptide repeat - - - 0.0000000000000000000000000000000000000001336 168.0
DYD1_k127_5478236_0 DEAD DEAH box K03724 - - 0.0 1385.0
DYD1_k127_5478236_1 Uracil DNA glycosylase superfamily K21929 - 3.2.2.27 0.0000000000000000000000000000000000000000000000000000000000000000000000002214 252.0
DYD1_k127_5480221_0 Metallo-beta-lactamase superfamily K01069 - 3.1.2.6 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002764 359.0
DYD1_k127_5480221_1 PQQ-like domain - - - 0.000000000000000000000000000000000000000000000000000001548 216.0
DYD1_k127_5480221_2 DinB superfamily - - - 0.0000000000000000000000000000000000000004424 154.0
DYD1_k127_5480221_3 hydrolase (HAD superfamily) K07025 - - 0.0000000000000000000000000008163 122.0
DYD1_k127_5480221_4 enterobactin catabolic process K07214 - - 0.000000000000000377 93.0
DYD1_k127_5485632_0 Sigma factor PP2C-like phosphatases K07315 - 3.1.3.3 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008627 347.0
DYD1_k127_5485632_1 Diguanylate cyclase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000241 274.0
DYD1_k127_5496579_0 Cytochrome c3 - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006563 372.0
DYD1_k127_5496579_1 denitrification pathway - - - 0.0000000000000000000000000000000000000000000000000000000000000000004296 237.0
DYD1_k127_5496579_2 2Fe-2S -binding domain protein K03518 - 1.2.5.3 0.00000000000000000000000000000000000000000000000000005012 191.0
DYD1_k127_5496579_3 Peptidase family M48 - - - 0.00000000000000001064 96.0
DYD1_k127_5503890_0 Multicopper oxidase K22348 - 1.16.3.3 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002288 547.0
DYD1_k127_5503890_1 Outer membrane efflux protein K15725 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000003135 299.0
DYD1_k127_5507589_0 Surface antigen K07277,K09800 - - 0.00000000000000000000000000000000000000000000000000000000000000000001811 255.0
DYD1_k127_5516156_0 COGs COG0515 Serine threonine protein kinase K12132 - 2.7.11.1 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005709 393.0
DYD1_k127_5516156_1 ABC transporter K02003 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001324 355.0
DYD1_k127_5516156_2 MacB-like periplasmic core domain K02004 - - 0.0000000000000000000819 94.0
DYD1_k127_5516156_3 May be involved in recombinational repair of damaged DNA K03631 - - 0.00000001766 57.0
DYD1_k127_5526658_0 phosphoprotein phosphatase activity K14680 - 6.5.1.3 0.000000000000000000000000000000000000000000000000000003839 200.0
DYD1_k127_5526658_1 - - - - 0.00000000000000000000000000000000000004113 160.0
DYD1_k127_5526658_2 phosphoprotein phosphatase activity - - - 0.0000000000000000000000007776 110.0
DYD1_k127_5526658_3 Protein conserved in bacteria K09990 - - 0.000000000000003027 81.0
DYD1_k127_5526658_4 YqcI/YcgG family K09190 - - 0.00000004114 58.0
DYD1_k127_5526658_5 oxidoreductase activity, acting on the aldehyde or oxo group of donors, disulfide as acceptor K00161,K11381,K21416 - 1.2.4.1,1.2.4.4 0.00002083 47.0
DYD1_k127_5566123_0 serine threonine protein kinase K12132 - 2.7.11.1 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000005324 313.0
DYD1_k127_5566123_1 Ankyrin repeats (many copies) - - - 0.0000000000000000000000000000000000002166 152.0
DYD1_k127_5567930_0 - - - - 0.00000000000001014 88.0
DYD1_k127_5567930_1 protein phosphatase 2C 55 K17508 GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0009507,GO:0009532,GO:0009536,GO:0009570,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0044422,GO:0044424,GO:0044434,GO:0044435,GO:0044444,GO:0044446,GO:0044464 3.1.3.16 0.0004832 51.0
DYD1_k127_557466_0 exo-alpha-(2->6)-sialidase activity - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000002042 311.0
DYD1_k127_557466_1 Mut7-C RNAse domain K09122 - - 0.00000000000000000000002722 108.0
DYD1_k127_557466_2 ATP-binding protein K04562 - - 0.00000000000000000009342 98.0
DYD1_k127_5579807_0 dna ligase K01971 - 6.5.1.1 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001813 431.0
DYD1_k127_5579807_1 Tetratricopeptide repeats K12132 - 2.7.11.1 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001719 407.0
DYD1_k127_5579807_2 Family 5 K02035,K15580 - - 0.000000000000000000000000000000000008876 150.0
DYD1_k127_5579807_3 ATPase (AAA superfamily - - - 0.000007199 51.0
DYD1_k127_558157_0 Glutamine synthetase, catalytic domain K01915 - 6.3.1.2 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009925 569.0
DYD1_k127_558157_1 Band 7 protein K07192 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002393 312.0
DYD1_k127_558157_2 helix_turn_helix ASNC type K03719 - - 0.00000000000000000000000000000000000000000000001115 175.0
DYD1_k127_558588_0 Catalyzes the attachment of proline to tRNA(Pro) in a two-step reaction proline is first activated by ATP to form Pro- AMP and then transferred to the acceptor end of tRNA(Pro). As ProRS can inadvertently accommodate and process non-cognate amino acids such as alanine and cysteine, to avoid such errors it has two additional distinct editing activities against alanine. One activity is designated as 'pretransfer' editing and involves the tRNA(Pro)-independent hydrolysis of activated Ala-AMP. The other activity is designated 'posttransfer' editing and involves deacylation of mischarged Ala-tRNA(Pro). The misacylated Cys- tRNA(Pro) is not edited by ProRS K01881 - 6.1.1.15 0.00000000000000000000000000000000000000000000000000000000000000000000000000000002565 271.0
DYD1_k127_558588_1 Belongs to the 5'-nucleotidase family K01081 - 3.1.3.5 0.0000000000000000000000000000000000000000000000000003838 202.0
DYD1_k127_558588_2 Domain of unknown function (DUF4190) - - - 0.000002752 54.0
DYD1_k127_5587593_0 Domain in cystathionine beta-synthase and other proteins. - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003741 456.0
DYD1_k127_5587593_1 von Willebrand factor, type A K11912 - 2.7.11.1 0.0000000000000000000000000000000000000000000000000000000000000000000000000000002386 279.0
DYD1_k127_5606097_0 Domain of unknown function (DUF4010) - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004696 391.0
DYD1_k127_5606097_1 Alanine-glyoxylate amino-transferase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004422 366.0
DYD1_k127_5606097_2 Catalyzes the formation of pyridoxal 5'-phosphate from ribose 5-phosphate (RBP), glyceraldehyde 3-phosphate (G3P) and ammonia. The ammonia is provided by the PdxT subunit. Can also use ribulose 5-phosphate and dihydroxyacetone phosphate as substrates, resulting from enzyme-catalyzed isomerization of RBP and G3P, respectively K06215 - 4.3.3.6 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000519 328.0
DYD1_k127_5606097_3 Belongs to the glyceraldehyde-3-phosphate dehydrogenase family K00134 - 1.2.1.12 0.00000000000000000000000000000000000000000000000000000000000000000000001455 244.0
DYD1_k127_5616974_0 Penicillin-binding protein, dimerisation domain K05515 - 3.4.16.4 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004169 371.0
DYD1_k127_5616974_1 Involved in formation and maintenance of cell shape K03570 - - 0.00000000000003306 78.0
DYD1_k127_5616974_2 4-amino-4-deoxy-L-arabinose transferase and related glycosyltransferases of PMT family - - - 0.0000000003371 72.0
DYD1_k127_5625962_0 amino acid - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000001796 308.0
DYD1_k127_5625962_1 - - - - 0.0000000715 55.0
DYD1_k127_5625962_2 ECF transporter, substrate-specific component K16923 - - 0.0000001056 63.0
DYD1_k127_5626219_0 Carboxypeptidase regulatory-like domain - - - 0.000000000000000000000000000000000000000000000000000000001498 232.0
DYD1_k127_5645918_0 it plays a direct role in the translocation of protons across the membrane K02108 GO:0003674,GO:0003824,GO:0005215,GO:0005575,GO:0005622,GO:0005623,GO:0005886,GO:0005887,GO:0006139,GO:0006163,GO:0006164,GO:0006725,GO:0006753,GO:0006754,GO:0006793,GO:0006796,GO:0006807,GO:0006810,GO:0006811,GO:0006812,GO:0008150,GO:0008152,GO:0008324,GO:0009058,GO:0009117,GO:0009123,GO:0009124,GO:0009126,GO:0009127,GO:0009141,GO:0009142,GO:0009144,GO:0009145,GO:0009150,GO:0009152,GO:0009156,GO:0009161,GO:0009165,GO:0009167,GO:0009168,GO:0009199,GO:0009201,GO:0009205,GO:0009206,GO:0009259,GO:0009260,GO:0009987,GO:0015075,GO:0015077,GO:0015078,GO:0015318,GO:0015399,GO:0015405,GO:0015672,GO:0015985,GO:0015986,GO:0016020,GO:0016021,GO:0016462,GO:0016469,GO:0016787,GO:0016817,GO:0016818,GO:0016887,GO:0017111,GO:0017144,GO:0018130,GO:0019438,GO:0019637,GO:0019693,GO:0019829,GO:0022804,GO:0022853,GO:0022857,GO:0022890,GO:0031224,GO:0031226,GO:0032991,GO:0033177,GO:0034220,GO:0034641,GO:0034654,GO:0042623,GO:0042625,GO:0042626,GO:0042777,GO:0043492,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0044424,GO:0044425,GO:0044459,GO:0044464,GO:0044769,GO:0045259,GO:0045263,GO:0046034,GO:0046390,GO:0046483,GO:0046933,GO:0051179,GO:0051234,GO:0055085,GO:0055086,GO:0071704,GO:0071944,GO:0072521,GO:0072522,GO:0090407,GO:0090662,GO:0098655,GO:0098660,GO:0098662,GO:0098796,GO:0099131,GO:0099132,GO:1901135,GO:1901137,GO:1901293,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576,GO:1902600 - 0.0000000000000000000000000000000000000000000000000000001024 204.0
DYD1_k127_5645918_1 Sugar-specific transcriptional regulator TrmB - - - 0.00000000000000000000000000000000000000000000000005514 188.0
DYD1_k127_5645918_2 Lysin motif - - - 0.000000000000000000000000000004903 123.0
DYD1_k127_5645918_3 gag-polyprotein putative aspartyl protease - - - 0.0000000007789 70.0
DYD1_k127_5652833_0 PFAM metal-dependent phosphohydrolase, HD sub domain - - - 0.0000000000000000000000000000000000000000000000000000000000000001135 226.0
DYD1_k127_5652833_1 Dolichyl-phosphate-mannose-protein mannosyltransferase - - - 0.000000000000000000000000000000000000000000000704 186.0
DYD1_k127_5652833_2 Domain of unknown function (DUF4126) - - - 0.0000000000000000000000000000000000000002034 156.0
DYD1_k127_5652833_3 Transcriptional regulatory protein, C terminal - - - 0.0000000000000000000000000003927 114.0
DYD1_k127_5652833_4 Stress-responsive transcriptional regulator - - - 0.00000000000000009983 85.0
DYD1_k127_5655342_0 Transglutaminase-like superfamily - - - 0.00000000000000000000000000000000000009848 162.0
DYD1_k127_5655342_1 Trypsin-like peptidase domain - - - 0.000005903 57.0
DYD1_k127_5655342_2 PFAM RNA-directed DNA polymerase (Reverse transcriptase) - - - 0.0001073 46.0
DYD1_k127_565649_0 cheY-homologous receiver domain - - - 0.0000000000000000000000404 106.0
DYD1_k127_565649_1 PAAR repeat-containing protein - - - 0.000000002417 68.0
DYD1_k127_565649_2 peptidyl-tyrosine sulfation - - - 0.000009471 55.0
DYD1_k127_5674038_0 Pfam ABC transporter related K16786,K16787 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000002105 268.0
DYD1_k127_5674038_1 Catalyzes the anaerobic formation of alpha-ketobutyrate and ammonia from threonine in a two-step reaction. The first step involved a dehydration of threonine and a production of enamine intermediates (aminocrotonate), which tautomerizes to its imine form (iminobutyrate). Both intermediates are unstable and short- lived. The second step is the nonenzymatic hydrolysis of the enamine imine intermediates to form 2-ketobutyrate and free ammonia. In the low water environment of the cell, the second step is accelerated by RidA K01754 - 4.3.1.19 0.0000000000000000000000000000000000000000000000000000000000000000000001395 250.0
DYD1_k127_5674038_2 PFAM Cobalt transport protein K02007,K02008 GO:0000041,GO:0005575,GO:0005623,GO:0005886,GO:0006810,GO:0006811,GO:0006812,GO:0008150,GO:0015675,GO:0016020,GO:0016021,GO:0030001,GO:0031224,GO:0032991,GO:0043190,GO:0044425,GO:0044459,GO:0044464,GO:0051179,GO:0051234,GO:0071944,GO:0098533,GO:0098796,GO:0098797,GO:1902494,GO:1902495,GO:1904949,GO:1990351 - 0.000000000000000000000000000000000000000000000000002776 192.0
DYD1_k127_5674038_3 Belongs to the peptidase S1C family K04771 - 3.4.21.107 0.00000000000000000000000000000000000000000000000004116 186.0
DYD1_k127_5689902_0 Catalyzes the oxidation of L-aspartate to iminoaspartate K00278 - 1.4.3.16 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000235 491.0
DYD1_k127_5689902_1 peptidyl-prolyl isomerase K03770 - 5.2.1.8 0.0000000000000000000000000000000000000000000000000000000000000000000001235 262.0
DYD1_k127_5689902_2 Calcineurin-like phosphoesterase superfamily domain - - - 0.00000000000000001297 84.0
DYD1_k127_5689902_3 Protein of unknown function DUF86 - - - 0.000000001287 59.0
DYD1_k127_5695210_0 Catalyzes the oxidation of glucose 6-phosphate to 6- phosphogluconolactone K00036 - 1.1.1.363,1.1.1.49 5.747e-202 642.0
DYD1_k127_5695210_1 Catalyzes the oxidative decarboxylation of 6- phosphogluconate to ribulose 5-phosphate and CO(2), with concomitant reduction of NADP to NADPH K00033 - 1.1.1.343,1.1.1.44 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008307 600.0
DYD1_k127_5695210_2 Phosphoglucose isomerase K01810,K13810 - 2.2.1.2,5.3.1.9 0.00000000000000000000000000000000000000000000000000000000000000003862 229.0
DYD1_k127_5708188_0 Belongs to the metallo-dependent hydrolases superfamily. HutI family K01468 - 3.5.2.7 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001524 370.0
DYD1_k127_5708188_1 PFAM Formiminotransferase-cyclodeaminase - - - 0.0000000000000000000000000000007301 130.0
DYD1_k127_5708188_2 DivIVA protein K04074 - - 0.000000000000000001724 91.0
DYD1_k127_5708188_3 YGGT family K02221 - - 0.0000000003301 65.0
DYD1_k127_5708188_4 Belongs to the UPF0235 family K09131 - - 0.000000007377 62.0
DYD1_k127_5716098_0 Cytochrome c oxidase is the component of the respiratory chain that catalyzes the reduction of oxygen to water. Subunits 1- 3 form the functional core of the enzyme complex. CO I is the catalytic subunit of the enzyme. Electrons originating in cytochrome c are transferred via the copper A center of subunit 2 and heme A of subunit 1 to the bimetallic center formed by heme A3 and copper B K02274 - 1.9.3.1 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006641 542.0
DYD1_k127_5716098_1 Cytochrome c oxidase subunit III K02276 - 1.9.3.1 0.0000000000000000001261 89.0
DYD1_k127_5716098_2 Cytochrome C oxidase subunit II, periplasmic domain - - - 0.0000002499 53.0
DYD1_k127_5716197_0 Histidine kinase K13598 - 2.7.13.3 0.000000000000000000000000000000000000000001143 175.0
DYD1_k127_5721500_0 exonuclease activity K16899 - 3.6.4.12 0.000000000000000000000000000000000002577 160.0
DYD1_k127_5723696_0 Acyl-CoA dehydrogenase, N-terminal domain K00248 - 1.3.8.1 4.291e-210 669.0
DYD1_k127_5723696_1 Belongs to the class-II aminoacyl-tRNA synthetase family K04567 - 6.1.1.6 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004181 527.0
DYD1_k127_572819_0 peptidase - - - 7.797e-252 793.0
DYD1_k127_572819_1 Peptidase family M28 K06016 - 3.5.1.6,3.5.1.87 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004508 520.0
DYD1_k127_572819_2 6-phosphogluconate dehydrogenase, C-terminal domain K00033 - 1.1.1.343,1.1.1.44 0.00000000000000000000000000000000000000000008788 165.0
DYD1_k127_5731556_0 Acyl-CoA synthetase (AMP-forming) AMP-acid ligase II K01897 - 6.2.1.3 0.00000000000000000000000000000000000000000000000000000000000000000000000000001617 278.0
DYD1_k127_5735369_0 Bacterial protein of unknown function (DUF885) - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009959 453.0
DYD1_k127_5735369_1 Endonuclease/Exonuclease/phosphatase family K01142 - 3.1.11.2 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002422 326.0
DYD1_k127_5735369_2 Glyoxalase-like domain - - - 0.0000000000002244 70.0
DYD1_k127_5737951_0 Necessary for efficient RNA polymerase transcription elongation past template-encoded arresting sites. The arresting sites in DNA have the property of trapping a certain fraction of elongating RNA polymerases that pass through, resulting in locked ternary complexes. Cleavage of the nascent transcript by cleavage factors such as GreA or GreB allows the resumption of elongation from the new 3'terminus. GreA releases sequences of 2 to 3 nucleotides - - - 0.0000000000000000000000000000000001857 152.0
DYD1_k127_5737951_1 protein import - - - 0.00000004216 64.0
DYD1_k127_5740786_0 Belongs to the peptidase M16 family K07263 - - 5.721e-319 996.0
DYD1_k127_5741178_0 Asparaginyl-tRNA synthetase K01893 GO:0003674,GO:0003824,GO:0004812,GO:0004816,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006082,GO:0006139,GO:0006399,GO:0006412,GO:0006418,GO:0006421,GO:0006518,GO:0006520,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0016070,GO:0016874,GO:0016875,GO:0019538,GO:0019752,GO:0034641,GO:0034645,GO:0034660,GO:0043038,GO:0043039,GO:0043043,GO:0043170,GO:0043436,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044281,GO:0044424,GO:0044464,GO:0046483,GO:0071704,GO:0090304,GO:0140098,GO:0140101,GO:1901360,GO:1901564,GO:1901566,GO:1901576 6.1.1.22 5.09e-201 633.0
DYD1_k127_5741178_1 Catalyzes the methylthiolation of an aspartic acid residue of ribosomal protein S12 K14441 - 2.8.4.4 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004982 414.0
DYD1_k127_5741178_2 Mediates influx of magnesium ions K03284 - - 0.000000000000000000000000000000000000000000000000000000000000000000001769 247.0
DYD1_k127_5741178_3 phosphotransferase related to Ser Thr protein kinases K07102 - 2.7.1.221 0.00000000000000000000000000000000000000000000008485 183.0
DYD1_k127_5741178_4 PFAM Rhomboid family protein - - - 0.0000000000000001046 83.0
DYD1_k127_5746418_0 Catalyzes the synthesis of activated sulfate K00958 - 2.7.7.4 8.919e-237 744.0
DYD1_k127_5746418_1 PFAM inositol monophosphatase K01082 - 3.1.3.7 0.0000000000000000004316 90.0
DYD1_k127_5746418_2 COG0745 Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain - - - 0.000000000000000001503 93.0
DYD1_k127_5746418_3 Protein of unknown function (DUF433) - - - 0.0001929 48.0
DYD1_k127_5771428_0 efflux transmembrane transporter activity K02004 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002177 485.0
DYD1_k127_5771428_1 COG1680 Beta-lactamase class C and other penicillin binding proteins - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001106 351.0
DYD1_k127_5771428_2 Toxic component of a toxin-antitoxin (TA) module K07171 - - 0.00000000000000000000000000000000000001372 147.0
DYD1_k127_5771428_3 - - - - 0.00000000000000000006798 91.0
DYD1_k127_5773383_0 phospho-N-acetylmuramoyl-pentapeptide-transferase activity K02851 - 2.7.8.33,2.7.8.35 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000134 321.0
DYD1_k127_5773383_1 c-di-gmp phosphodiesterase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000006424 284.0
DYD1_k127_5773383_2 Fatty acid hydroxylase superfamily - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000003222 276.0
DYD1_k127_5776988_0 Catalyzes the methylthiolation of N6- (dimethylallyl)adenosine (i(6)A), leading to the formation of 2- methylthio-N6-(dimethylallyl)adenosine (ms(2)i(6)A) at position 37 in tRNAs that read codons beginning with uridine K06168 - 2.8.4.3 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004878 390.0
DYD1_k127_5776988_1 - - - - 0.0000000000000000000000000000000000000000000153 169.0
DYD1_k127_5776988_2 ABC transporter, phosphonate, periplasmic substrate-binding protein K02020 - - 0.00000000000001157 83.0
DYD1_k127_5786848_0 helix_turn_helix, arabinose operon control protein - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000001644 255.0
DYD1_k127_5786848_1 DJ-1/PfpI family - - - 0.00000000000000000000000000000000000000000000000000000000000000003482 239.0
DYD1_k127_5800699_0 RelA SpoT domain protein - - - 0.0000000000000000000000000000000000000000000000000000002283 201.0
DYD1_k127_5800699_1 Glycosyl transferase, family 2 K01002,K20534 - 2.7.8.20 0.0000000000000000000000000000000000000000000001484 184.0
DYD1_k127_5800699_2 Tetratricopeptide repeat - - - 0.0000000000000000001508 101.0
DYD1_k127_5800699_3 PFAM blue (type 1) copper domain protein - - - 0.000000001351 63.0
DYD1_k127_5805730_0 Peptidase dimerisation domain K12941 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001196 549.0
DYD1_k127_5805730_1 - - - - 0.00000000000000000000000000000000000000000000000000000000000000002702 239.0
DYD1_k127_582505_0 4Fe-4S binding domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000002747 273.0
DYD1_k127_582505_1 - - - - 0.000000000000000000000000000000000000000004278 157.0
DYD1_k127_582505_2 Menaquinol oxidoreductase complex Cbc4, cytochrome c subunit - - - 0.000000000000000000000000000002864 127.0
DYD1_k127_582505_3 SpoVT / AbrB like domain - - - 0.00000000000000000005997 92.0
DYD1_k127_582505_4 ribonuclease activity - - - 0.0000000000000000188 84.0
DYD1_k127_5827288_0 Protein of unknown function (DUF692) K09930 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000771 327.0
DYD1_k127_5827288_1 tRNA cytidylyltransferase activity - - - 0.000000000000000000000000000000000000000000000000000000000000592 224.0
DYD1_k127_5827288_2 - - - - 0.000000000000000000000000000000000001477 149.0
DYD1_k127_5828679_0 Serine Threonine protein kinase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000008897 298.0
DYD1_k127_5840955_0 - - - - 0.000000000007541 71.0
DYD1_k127_5840955_1 Poorly processive, error-prone DNA polymerase involved in untargeted mutagenesis. Copies undamaged DNA at stalled replication forks, which arise in vivo from mismatched or misaligned primer ends. These misaligned primers can be extended by PolIV. Exhibits no 3'-5' exonuclease (proofreading) activity. May be involved in translesional synthesis, in conjunction with the beta clamp from PolIII K02346 GO:0000731,GO:0003674,GO:0003824,GO:0003887,GO:0005575,GO:0005622,GO:0005623,GO:0005634,GO:0005654,GO:0005737,GO:0006139,GO:0006259,GO:0006260,GO:0006281,GO:0006301,GO:0006725,GO:0006807,GO:0006950,GO:0006974,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0016604,GO:0016607,GO:0016740,GO:0016772,GO:0016779,GO:0018130,GO:0019438,GO:0019985,GO:0031974,GO:0031981,GO:0032991,GO:0033554,GO:0034061,GO:0034641,GO:0034645,GO:0034654,GO:0035770,GO:0036464,GO:0042276,GO:0043170,GO:0043226,GO:0043227,GO:0043228,GO:0043229,GO:0043231,GO:0043232,GO:0043233,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044271,GO:0044422,GO:0044424,GO:0044428,GO:0044444,GO:0044446,GO:0044451,GO:0044464,GO:0046483,GO:0050896,GO:0051716,GO:0070013,GO:0071704,GO:0071897,GO:0090304,GO:0140097,GO:1901360,GO:1901362,GO:1901576,GO:1990904 2.7.7.7 0.0000000004803 71.0
DYD1_k127_5844612_0 cystathione gamma lyase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001806 439.0
DYD1_k127_5844612_1 hydrolase, CocE NonD family K06978 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009892 380.0
DYD1_k127_5869467_0 Radical SAM - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008365 448.0
DYD1_k127_5869467_1 Domain of unknown function (DUF2383) - - - 0.00000000000000000000000000000485 130.0
DYD1_k127_5869467_2 Belongs to the peptidase M50B family - - - 0.00000000000000000001656 96.0
DYD1_k127_5869467_3 Uncharacterized protein family UPF0016 - - - 0.00000000000000000002539 93.0
DYD1_k127_5869467_4 Cytochrome c7 and related cytochrome c - - - 0.000000000000000006006 89.0
DYD1_k127_5869467_5 Carboxypeptidase regulatory-like domain - - - 0.0000000000000145 75.0
DYD1_k127_5894116_0 carboxylic acid catabolic process K02549 GO:0006732,GO:0008150,GO:0008152,GO:0009058,GO:0009108,GO:0009233,GO:0009234,GO:0009987,GO:0042180,GO:0042181,GO:0044237,GO:0044249,GO:0044281,GO:0044283,GO:0051186,GO:0051188,GO:0071704,GO:1901576,GO:1901661,GO:1901663 4.2.1.113 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004515 376.0
DYD1_k127_5894116_1 Belongs to the 'phage' integrase family K04763 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000001942 284.0
DYD1_k127_5894116_2 Domain of unknown function (DUF2383) - - - 0.00000000000000000001955 99.0
DYD1_k127_5894116_3 Glutathione synthase Ribosomal protein S6 modification enzyme (Glutaminyl transferase) K03802,K05844 - 6.3.2.29,6.3.2.30 0.00000000000000000007506 96.0
DYD1_k127_5894116_4 Activates the tRNA-splicing ligase complex by facilitating the enzymatic turnover of catalytic subunit RtcB. Acts by promoting the guanylylation of RtcB, a key intermediate step in tRNA ligation. Can also alter the NTP specificity of RtcB such that ATP, dGTP or ITP is used efficiently - - - 0.000000000000001816 85.0
DYD1_k127_5895296_0 PFAM Type II secretion system protein E K02652 - - 2.896e-224 707.0
DYD1_k127_5895296_1 Type ii and iii secretion system protein K02453 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002744 324.0
DYD1_k127_5895296_2 type II secretion system K02653 - - 0.000000000000000000000000000000000000000000000002515 181.0
DYD1_k127_5895296_4 Pilus assembly protein K02662 - - 0.0000001694 63.0
DYD1_k127_5895296_5 - - - - 0.000124 52.0
DYD1_k127_5896806_0 homocysteine S-methyltransferase K00297,K00547 - 1.5.1.20,2.1.1.10 2.5e-209 668.0
DYD1_k127_5896806_1 Gamma-glutamyltranspeptidase K00681 - 2.3.2.2,3.4.19.13 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001309 532.0
DYD1_k127_5896806_2 GDSL-like Lipase/Acylhydrolase family - - - 0.0000000000000000000000000000000000005284 149.0
DYD1_k127_5896806_3 glycosyl transferase group 1 K20444 - - 0.000000000000000000000008531 116.0
DYD1_k127_5896806_4 - - - - 0.00000000000000000000002032 111.0
DYD1_k127_5904007_0 COG0577 ABC-type antimicrobial peptide transport system, permease component K02004 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002889 320.0
DYD1_k127_5904007_1 MarR family - - - 0.0000000000000000000000000000000000000000000000000000000000000000000008963 240.0
DYD1_k127_5904007_2 PFAM Acetyltransferase (GNAT) family K03790 - 2.3.1.128 0.000000000000000000000000000000000000000000000000000003206 195.0
DYD1_k127_5904007_3 Belongs to the aspartate glutamate racemases family K01779 - 5.1.1.13 0.000000000000000000000000000000000000000000000001893 179.0
DYD1_k127_5904701_0 ABC transporter K06861 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007023 329.0
DYD1_k127_5904701_1 bacterial-type RNA polymerase transcriptional activator activity, sequence-specific DNA binding K03092 - - 0.0000009727 54.0
DYD1_k127_5907145_0 - - - - 0.000000002466 61.0
DYD1_k127_5907145_1 Belongs to the peptidase S8 family K05988 - 3.2.1.11 0.000000002478 65.0
DYD1_k127_5907145_3 Domain of unknown function (DUF4070) - - - 0.00000817 51.0
DYD1_k127_5909685_0 Domain of unknown function (DUF4921) K00965 - 2.7.7.12 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002168 493.0
DYD1_k127_5909685_1 Belongs to the class-I aminoacyl-tRNA synthetase family K01883,K15526 GO:0000166,GO:0001871,GO:0003674,GO:0003824,GO:0004812,GO:0004817,GO:0005488,GO:0005524,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005886,GO:0006082,GO:0006139,GO:0006399,GO:0006412,GO:0006418,GO:0006423,GO:0006518,GO:0006520,GO:0006725,GO:0006790,GO:0006807,GO:0008144,GO:0008150,GO:0008152,GO:0008270,GO:0009058,GO:0009059,GO:0009986,GO:0009987,GO:0010125,GO:0010126,GO:0010467,GO:0016020,GO:0016070,GO:0016137,GO:0016138,GO:0016874,GO:0016875,GO:0016879,GO:0016880,GO:0017076,GO:0019538,GO:0019752,GO:0030246,GO:0030247,GO:0030554,GO:0032553,GO:0032555,GO:0032559,GO:0034641,GO:0034645,GO:0034660,GO:0035446,GO:0035639,GO:0036094,GO:0040007,GO:0043038,GO:0043039,GO:0043043,GO:0043167,GO:0043168,GO:0043169,GO:0043170,GO:0043436,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044272,GO:0044281,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0046872,GO:0046914,GO:0051186,GO:0051188,GO:0071704,GO:0071944,GO:0090304,GO:0097159,GO:0097367,GO:0140098,GO:0140101,GO:1901135,GO:1901137,GO:1901265,GO:1901360,GO:1901363,GO:1901564,GO:1901566,GO:1901576,GO:1901657,GO:1901659,GO:2001065 6.1.1.16,6.3.1.13 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007099 492.0
DYD1_k127_5909685_2 Glycosyl transferases group 1 - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000236 460.0
DYD1_k127_5909685_3 Glycosyl transferases group 1 - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002865 351.0
DYD1_k127_5909685_4 Glycosyl transferases group 1 - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000002388 300.0
DYD1_k127_5909685_5 Glycosyl transferases group 1 - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000004484 291.0
DYD1_k127_5909685_6 Transcriptional regulator containing an amidase domain and an AraC-type DNA-binding HTH domain - - - 0.00000000000000000000000000000000000000000000000000000000001739 218.0
DYD1_k127_5909685_7 PFAM Methyltransferase domain K18827 - 2.1.1.294,2.7.1.181 0.0000000000000000000000000000000003163 148.0
DYD1_k127_5909685_8 nuclease activity K07460 - - 0.00000000000000000002247 96.0
DYD1_k127_591140_0 Diguanylate cyclase, GGDEF domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003068 380.0
DYD1_k127_5922855_0 Aldehyde dehydrogenase family K00128,K22445 - 1.2.1.3,1.2.99.10 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002021 509.0
DYD1_k127_5922855_1 Radical SAM domain protein K04070 - 1.97.1.4 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005212 398.0
DYD1_k127_5922855_2 Frataxin-like domain K06202 - - 0.00000000000000000003153 93.0
DYD1_k127_5922855_3 aldo keto reductase - - - 0.0000000000000003216 82.0
DYD1_k127_5932023_0 Evidence 4 Homologs of previously reported genes of K21440 - - 0.000000000000000000000000000000001654 143.0
DYD1_k127_5932023_1 Uncharacterized ACR, COG1430 K09005 - - 0.0000000000000000000000004931 109.0
DYD1_k127_5932023_2 OmpA family K03640 - - 0.00000000000000000001076 106.0
DYD1_k127_5932023_3 oxidoreductase activity K07114,K16257 - - 0.000000000002148 78.0
DYD1_k127_5947124_0 ATPase that binds to both the 70S ribosome and the 50S ribosomal subunit in a nucleotide-independent manner K06942 GO:0003674,GO:0003824,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0016462,GO:0016787,GO:0016817,GO:0016818,GO:0016887,GO:0017111,GO:0044424,GO:0044464 - 0.000000000000000000000000000000000000000000000000000000000000000000000001985 254.0
DYD1_k127_5947124_1 Glycosyl transferase 4-like domain - - - 0.0000000000000000000000000000000000000000002615 161.0
DYD1_k127_5947124_2 Transfers a GMP moiety from GTP to Mo-molybdopterin (Mo- MPT) cofactor (Moco or molybdenum cofactor) to form Mo- molybdopterin guanine dinucleotide (Mo-MGD) cofactor K03752 - 2.7.7.77 0.0000000000000000000000000000000002968 139.0
DYD1_k127_595334_0 Bacterioferritin (cytochrome b1) K03594 - 1.16.3.1 0.00000000000000000000000000000000000000000000000000000001706 202.0
DYD1_k127_595334_1 ATPase activity - - - 0.0000000004924 68.0
DYD1_k127_5963378_0 lipopolysaccharide transport K22110 - - 0.0 1341.0
DYD1_k127_5963378_1 Phosphoglucose isomerase K01810,K13810 - 2.2.1.2,5.3.1.9 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008912 471.0
DYD1_k127_5963378_2 Predicted integral membrane protein (DUF2270) - - - 0.00000000000000000000000000000000000000000000000000000000000000000001236 240.0
DYD1_k127_5963378_3 PFAM ATPase family associated with various cellular activities (AAA) - - - 0.0000000000000000000000000000000000003362 150.0
DYD1_k127_5963378_4 PFAM Pentapeptide repeats (8 copies) - - - 0.00000000000000000000000006121 123.0
DYD1_k127_5964713_0 Catalyzes the ATP-dependent amination of UTP to CTP with either L-glutamine or ammonia as the source of nitrogen. Regulates intracellular CTP levels through interactions with the four ribonucleotide triphosphates - - - 0.000000000000000000000000000000000000008339 149.0
DYD1_k127_5964713_1 translation initiation factor activity K06996 - - 0.0000000000000000002387 92.0
DYD1_k127_5964713_2 Glutamine amidotransferase class-I K01937 - 6.3.4.2 0.00000000000000226 78.0
DYD1_k127_5964713_3 ABC transporter substrate binding protein K01989 - - 0.0000000000000364 86.0
DYD1_k127_5964713_4 - - - - 0.000000003385 61.0
DYD1_k127_5966969_0 MacB-like periplasmic core domain - - - 1.414e-205 660.0
DYD1_k127_5966969_1 Carbohydrate family 9 binding domain-like - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003298 387.0
DYD1_k127_5966969_2 peptidoglycan-binding protein - - - 0.00000000000000000000000000000000000000000000000000000000000000001315 233.0
DYD1_k127_5977560_0 Psort location Cytoplasmic, score - - - 0.0000000000000000000000000000000000000000000000000007076 185.0
DYD1_k127_5977560_1 AAA ATPase domain - - - 0.000000000000000000000000000000000001973 141.0
DYD1_k127_5977560_2 PFAM Endonuclease Exonuclease phosphatase - - - 0.0000000000000000000000000001965 124.0
DYD1_k127_5977560_3 nuclease activity K18828 - - 0.000000000165 64.0
DYD1_k127_5977560_4 PFAM PIN domain K18828 - - 0.000000457 55.0
DYD1_k127_5981221_0 7TM-HD extracellular K07037 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002813 441.0
DYD1_k127_5981221_1 PhoH-like protein K06217 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000009458 291.0
DYD1_k127_5981221_2 An essential GTPase that binds both GDP and GTP, with rapid nucleotide exchange. Plays a role in 16S rRNA processing and 30S ribosomal subunit biogenesis and possibly also in cell cycle regulation and energy metabolism K03595 GO:0000166,GO:0001882,GO:0001883,GO:0003674,GO:0003824,GO:0003924,GO:0005488,GO:0005525,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005886,GO:0006275,GO:0008150,GO:0008156,GO:0009889,GO:0009890,GO:0009892,GO:0010556,GO:0010558,GO:0010605,GO:0016020,GO:0016462,GO:0016787,GO:0016817,GO:0016818,GO:0017076,GO:0017111,GO:0019001,GO:0019003,GO:0019219,GO:0019222,GO:0030174,GO:0031323,GO:0031324,GO:0031326,GO:0031327,GO:0032297,GO:0032549,GO:0032550,GO:0032553,GO:0032555,GO:0032561,GO:0035639,GO:0036094,GO:0043167,GO:0043168,GO:0044424,GO:0044464,GO:0045934,GO:0048518,GO:0048519,GO:0048522,GO:0048523,GO:0050789,GO:0050794,GO:0051052,GO:0051053,GO:0051171,GO:0051172,GO:0051302,GO:0051781,GO:0060255,GO:0065007,GO:0071944,GO:0080090,GO:0090329,GO:0097159,GO:0097367,GO:1901265,GO:1901363,GO:2000104,GO:2000112,GO:2000113 - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000008897 285.0
DYD1_k127_5981221_3 CBS domain - - - 0.000000000000000000000000000000000000000000000000001092 199.0
DYD1_k127_5981221_4 PFAM ABC transporter K06861 - - 0.000000000000000000000000000000000000000000000004328 176.0
DYD1_k127_5981221_5 Single strand-specific metallo-endoribonuclease involved in late-stage 70S ribosome quality control and in maturation of the 3' terminus of the 16S rRNA K07042 - - 0.00000000000000000000001696 107.0
DYD1_k127_5981221_6 OstA-like protein K09774 - - 0.0000001505 65.0
DYD1_k127_5981221_7 Involved in the assembly of lipopolysaccharide (LPS). Required for the translocation of LPS from the inner membrane to the outer membrane. May form a bridge between the inner membrane and the outer membrane, via interactions with LptC and LptD, thereby facilitating LPS transfer across the periplasm K09774 - - 0.00008654 56.0
DYD1_k127_598245_0 histone acetyltransferase binding - - - 0.00000000000000000000000000000000000000000000000004407 193.0
DYD1_k127_598245_1 Domain of unknown function (DUF4129) - - - 0.0000000000000000000000000000000000000000000003812 175.0
DYD1_k127_598245_2 Domain of unknown function (DUF4129) - - - 0.0000000000000000000000000000000004132 141.0
DYD1_k127_598245_3 - - - - 0.0000000000000000000005622 100.0
DYD1_k127_598245_4 Domain of unknown function (DUF4129) - - - 0.00000221 49.0
DYD1_k127_598541_0 serine threonine protein kinase K12132 - 2.7.11.1 0.00000000000000000000000000000000000000000000000000000000001506 238.0
DYD1_k127_598541_1 Bacterial extracellular solute-binding proteins, family 5 Middle K02035,K15580 - - 0.0000000000000000000000000000000003277 154.0
DYD1_k127_5991219_0 PFAM ABC transporter related K01990 - - 0.000000000000000000000000000000000000000000000000000000000000000000000009727 251.0
DYD1_k127_5991219_1 Lipid A biosynthesis K02517 - 2.3.1.241 0.0000000000000000000000000000000000000000000000000000003125 205.0
DYD1_k127_5991219_2 Transfers the gamma-phosphate of ATP to the 4'-position of a tetraacyldisaccharide 1-phosphate intermediate (termed DS-1- P) to form tetraacyldisaccharide 1,4'-bis-phosphate (lipid IVA) K00912 - 2.7.1.130 0.000000000000000000000000000000000000000000000000001462 194.0
DYD1_k127_5991219_3 D,D-heptose 1,7-bisphosphate phosphatase K03273 - 3.1.3.82,3.1.3.83 0.000000000000000000000000000000000000000004696 161.0
DYD1_k127_5991219_4 3-Deoxy-D-manno-octulosonic-acid transferase (kdotransferase) K02527 - 2.4.99.12,2.4.99.13,2.4.99.14,2.4.99.15 0.0000000000000001724 83.0
DYD1_k127_5991219_5 Putative ATP-binding cassette K01992 - - 0.000000000000002865 86.0
DYD1_k127_599428_0 PFAM Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase - - - 0.000000000000000005198 98.0
DYD1_k127_599428_1 Histidine kinase - - - 0.00000000000000002107 96.0
DYD1_k127_5996744_0 Belongs to the deoxyhypusine synthase family K00809 - 2.5.1.46 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001607 490.0
DYD1_k127_5996744_1 Domain of unknown function (DUF4173) - - - 0.000000000000000000000000000000002475 134.0
DYD1_k127_5996744_2 Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family K20444 - - 0.00000000000000000000000000003707 123.0
DYD1_k127_5996744_3 PFAM thioesterase superfamily protein K07107 - - 0.0000000000000000000000001015 111.0
DYD1_k127_5996744_4 Regulatory protein, FmdB family - - - 0.000000000008768 68.0
DYD1_k127_5996744_5 Prokaryotic RING finger family 1 - - - 0.0003288 48.0
DYD1_k127_5999485_0 Sodium:solute symporter family - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000859 590.0
DYD1_k127_5999485_1 PFAM GlcNAc-PI de-N-acetylase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000001066 279.0
DYD1_k127_5999841_0 Alanine-glyoxylate amino-transferase K05825 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000297 314.0
DYD1_k127_5999841_1 PFAM Peptidase M23 - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000003909 304.0
DYD1_k127_5999841_2 Serine threonine protein kinase K12132 - 2.7.11.1 0.0000000000000000000000000005638 130.0
DYD1_k127_5999841_3 Methyltransferase type 12 - - - 0.0000000000008627 80.0
DYD1_k127_5999841_4 hydrolase K01091 - 3.1.3.18 0.0000001014 55.0
DYD1_k127_6000089_0 Involved in the tonB-independent uptake of proteins K08884,K12132 - 2.7.11.1 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001905 344.0
DYD1_k127_6000089_1 acid phosphatase activity K01727 - 4.2.2.1 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000001787 298.0
DYD1_k127_6000089_2 cellulose binding - - - 0.000000000000000000000000000000000000000000000000000000000000002466 250.0
DYD1_k127_6000089_3 Serine/threonine phosphatases, family 2C, catalytic domain K01090,K20074 - 3.1.3.16 0.00000000000000000000000000000000000000000000000000000000000000537 227.0
DYD1_k127_6000089_4 FG-GAP repeat - - - 0.000000000000000000000000000000000000000006072 179.0
DYD1_k127_6008096_0 Lanthionine synthetase C-like protein - - - 3.888e-213 700.0
DYD1_k127_6008096_1 Phosphate acyltransferases K01897 - 6.2.1.3 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000138 506.0
DYD1_k127_6008096_2 PFAM Nitrile hydratase, alpha chain - - - 0.0000000000007879 72.0
DYD1_k127_6009117_0 Male sterility protein K01710,K01784,K12450 - 4.2.1.46,4.2.1.76,5.1.3.2 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005382 321.0
DYD1_k127_6009117_1 sequence-specific DNA binding K03719 - - 0.00000000000000000000000000000000000000000001773 166.0
DYD1_k127_6009117_2 EamA-like transporter family - - - 0.000000000000000000000009775 106.0
DYD1_k127_6009117_3 Arginase family - - - 0.000000000182 67.0
DYD1_k127_6009117_4 PFAM GCN5-related N-acetyltransferase - - - 0.00009747 47.0
DYD1_k127_6011060_0 antisigma factor binding K04749,K04757 - 2.7.11.1 0.000000000000000000000000000000000000000000000000000000000000000000000004484 257.0
DYD1_k127_6011060_1 ABC transporter substrate binding protein - - - 0.000000000000000000000000000000000000000000000000000000000000000001947 240.0
DYD1_k127_6011060_2 Histidine kinase-like ATPase domain K04757 - 2.7.11.1 0.00000000000000000000000000000001649 131.0
DYD1_k127_6017943_0 Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released K03086 - - 0.00000000000000000000000000000000000000000000000000000001884 208.0
DYD1_k127_6017943_1 TIGRFAM RND efflux system, outer membrane lipoprotein, NodT - - - 0.0000000000000008412 79.0
DYD1_k127_601835_0 DegT/DnrJ/EryC1/StrS aminotransferase family - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001116 509.0
DYD1_k127_601835_1 DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates K03040 - 2.7.7.6 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003952 376.0
DYD1_k127_601835_2 Negatively regulates transcription of bacterial ribonucleotide reductase nrd genes and operons by binding to NrdR- boxes K07738 - - 0.000000000000000000000000000000000000000000000000000000584 196.0
DYD1_k127_601835_3 Lysylphosphatidylglycerol synthase TM region K07027 - - 0.000000000000000000000000000000000000000000000008258 184.0
DYD1_k127_601835_4 PFAM ribosomal protein L17 K02879 GO:0003674,GO:0003735,GO:0005198,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0015934,GO:0022625,GO:0022626,GO:0032991,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:1990904 - 0.0000000000000000000000000002309 120.0
DYD1_k127_6022595_0 Wzt C-terminal domain K09691 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000009654 299.0
DYD1_k127_6022595_1 COGs COG1680 Beta-lactamase class C and other penicillin binding protein - - - 0.00000000000000000000000000000000000000000000000000000000000000000001675 243.0
DYD1_k127_6022595_2 Iron-sulfur cluster-binding domain - - - 0.000000000000000000000000000000000000000001238 162.0
DYD1_k127_6027214_0 Specifically catalyzes the decarboxylation of meso- diaminopimelate (meso-DAP) to L-lysine K01586 - 4.1.1.20 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005804 462.0
DYD1_k127_6032666_0 N2-acetyl-L-ornithine:2-oxoglutarate 5-aminotransferase activity K00821,K05830,K09251 - 2.6.1.11,2.6.1.17,2.6.1.82 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008913 545.0
DYD1_k127_6032666_1 Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family K07250 - 2.6.1.19,2.6.1.22 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006383 520.0
DYD1_k127_6032666_2 Saccharopine dehydrogenase C-terminal domain K00290 - 1.5.1.7 0.000000000000000000000000000000000000000000000000000000011 206.0
DYD1_k127_6032666_3 zinc-ribbon family - - - 0.0000000000000004051 81.0
DYD1_k127_6047187_0 STAS domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000157 484.0
DYD1_k127_6047187_1 - K00003,K00058,K01754,K04767 - 1.1.1.3,1.1.1.399,1.1.1.95,4.3.1.19 0.0000000000000000000000000000000002173 136.0
DYD1_k127_6057783_0 Methyltransferase type 11 K07755 - 2.1.1.137 0.0000000000000000000000000000000000000000000000000000000000000000000008817 245.0
DYD1_k127_6057783_1 Thioredoxin-like domain - - - 0.0000000000000000000000000000000000000000003442 169.0
DYD1_k127_6063668_0 First step of the lipid cycle reactions in the biosynthesis of the cell wall peptidoglycan K01000 - 2.7.8.13 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001845 361.0
DYD1_k127_6063668_1 Cell wall formation. Catalyzes the addition of glutamate to the nucleotide precursor UDP-N-acetylmuramoyl-L-alanine (UMA) K01925 - 6.3.2.9 0.00000000000000000000000000000000000000007583 156.0
DYD1_k127_6063668_2 Involved in cell wall formation. Catalyzes the final step in the synthesis of UDP-N-acetylmuramoyl-pentapeptide, the precursor of murein K01929,K15792 - 6.3.2.10,6.3.2.13 0.000000000000000000000000000000000005987 141.0
DYD1_k127_6071755_0 membrane - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004724 389.0
DYD1_k127_6071755_1 succinate dehydrogenase or fumarate reductase, flavoprotein K00239 - 1.3.5.1,1.3.5.4 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001 327.0
DYD1_k127_6071755_2 Belongs to the peptidase S41A family K03797 - 3.4.21.102 0.00000000000000000000000000000000000000002913 168.0
DYD1_k127_6092537_0 AMP-binding enzyme C-terminal domain K01897 - 6.2.1.3 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003194 388.0
DYD1_k127_6092537_1 MMPL family K07003 - - 0.00000000000000000000000000000000000000000000000000000000000000000000001032 267.0
DYD1_k127_6092537_2 Serine hydrolase involved in the detoxification of formaldehyde - - - 0.00000000000000000000000000000000000000000000000002751 189.0
DYD1_k127_6092537_3 FAD dependent oxidoreductase - - - 0.0000000000000000000000000000000000000000000001514 180.0
DYD1_k127_6092537_4 Outer membrane lipoprotein carrier protein LolA - - - 0.0000000005824 68.0
DYD1_k127_6092537_5 Toxic component of a toxin-antitoxin (TA) module. An RNase K07065 - - 0.000000003952 63.0
DYD1_k127_6095264_0 TonB dependent receptor - - - 1.768e-213 689.0
DYD1_k127_6095264_1 BON domain - - - 0.00000000000000007088 89.0
DYD1_k127_6095264_2 BON domain - - - 0.00000000000003669 81.0
DYD1_k127_6095264_3 Oxidoreductase K06151 - 1.1.99.3 0.00000006968 57.0
DYD1_k127_6096351_0 Required for chromosome condensation and partitioning K03529 GO:0003674,GO:0005488,GO:0005515,GO:0042802 - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002121 477.0
DYD1_k127_6096351_1 PFAM Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase - - - 0.0000001183 62.0
DYD1_k127_6096351_2 PFAM amine oxidase K01854 - 5.4.99.9 0.00002705 47.0
DYD1_k127_6098309_0 Domain of unknown function (DUF5117) - - - 1.92e-223 722.0
DYD1_k127_6098309_1 Hydrolase CocE NonD family K06978 - - 0.000000000000000000000002044 109.0
DYD1_k127_6101321_0 Cation transporter/ATPase, N-terminus K01537 - 3.6.3.8 0.0 1152.0
DYD1_k127_6112199_0 Aminotransferase K00812,K22457 GO:0003674,GO:0003824,GO:0008483,GO:0016740,GO:0016769,GO:0047297 2.6.1.1,2.6.1.14 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000548 368.0
DYD1_k127_6112199_1 Belongs to the ribulose-phosphate 3-epimerase family K01783 - 5.1.3.1 0.000000000000000000000000000000000000000000000000000000000000000000000000006407 258.0
DYD1_k127_6112199_2 PFAM thioesterase superfamily protein K07107 - - 0.00000000000000000000000000001081 122.0
DYD1_k127_6112199_3 PFAM PASTA domain K01921,K08884,K12132 - 2.7.11.1,6.3.2.4 0.0000000000000005478 87.0
DYD1_k127_6112199_4 Reversibly transfers an adenylyl group from ATP to 4'- phosphopantetheine, yielding dephospho-CoA (dPCoA) and pyrophosphate K00954 GO:0003674,GO:0003824,GO:0004595,GO:0006139,GO:0006163,GO:0006164,GO:0006725,GO:0006732,GO:0006753,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009108,GO:0009117,GO:0009150,GO:0009152,GO:0009165,GO:0009259,GO:0009260,GO:0009987,GO:0015936,GO:0015937,GO:0016740,GO:0016772,GO:0016779,GO:0018130,GO:0019438,GO:0019637,GO:0019693,GO:0033865,GO:0033866,GO:0033875,GO:0034030,GO:0034032,GO:0034033,GO:0034641,GO:0034654,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0046390,GO:0046483,GO:0051186,GO:0051188,GO:0055086,GO:0070566,GO:0071704,GO:0072521,GO:0072522,GO:0090407,GO:1901135,GO:1901137,GO:1901293,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576 2.7.7.3 0.0005948 42.0
DYD1_k127_611928_0 NAD(P)-binding Rossmann-like domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004091 368.0
DYD1_k127_611928_1 PFAM PKD domain containing protein - - - 0.00000000000000000000000000000000000000000000000001359 199.0
DYD1_k127_6124743_0 Glycosyltransferase Family 4 - - - 0.00000000000000000000000000000000000000000000001198 186.0
DYD1_k127_6124743_1 PFAM Glycosyl transferases group 1 - - - 0.0000000000000000000000000000000000000000000001256 177.0
DYD1_k127_613368_0 Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family K00823,K07250 - 2.6.1.19,2.6.1.22 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001226 537.0
DYD1_k127_613368_1 Aldehyde dehydrogenase family K00294 - 1.2.1.88 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001719 533.0
DYD1_k127_613368_2 Coenzyme A transferase K01039 - 2.8.3.12 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000137 411.0
DYD1_k127_613368_3 Aminotransferase class-III K03851,K15372 - 2.6.1.55,2.6.1.77 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001983 316.0
DYD1_k127_613368_4 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily - - - 0.00009822 47.0
DYD1_k127_61361_0 Transporter, major facilitator family protein K08369 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000002381 277.0
DYD1_k127_61361_1 serine threonine protein kinase K12132 - 2.7.11.1 0.0000000000000000000000000000000000000000000004543 192.0
DYD1_k127_6145706_0 NAD(P) transhydrogenase beta subunit K00325 - 1.6.1.2 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008735 539.0
DYD1_k127_6145706_1 COG3288 NAD NADP transhydrogenase alpha subunit K00324 - 1.6.1.2 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005775 353.0
DYD1_k127_6145706_2 Outer membrane efflux protein K12340 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000002788 293.0
DYD1_k127_6145706_3 4TM region of pyridine nucleotide transhydrogenase, mitoch K00324 - 1.6.1.2 0.0000000000000000000002766 104.0
DYD1_k127_6148737_0 Sigma-54 interaction domain - - - 1.004e-204 655.0
DYD1_k127_6148737_1 Sigma-70 region 2 - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001725 397.0
DYD1_k127_6148737_2 - - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000003203 286.0
DYD1_k127_6148737_3 Opacity protein and related surface antigens - - - 0.0000000000000000003396 95.0
DYD1_k127_6159628_0 Belongs to the 5'-nucleotidase family K11751 - 3.1.3.5,3.6.1.45 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001665 559.0
DYD1_k127_6159628_1 3-oxoacyl-[acyl-carrier-protein] synthase activity K09458 - 2.3.1.179 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003671 447.0
DYD1_k127_6159628_2 geranylgeranyl reductase activity K21401 - 1.3.99.38 0.000000000001798 71.0
DYD1_k127_6159628_3 Sulfatase-modifying factor enzyme 1 - - - 0.000000009089 63.0
DYD1_k127_6182305_0 Isochorismatase family K08281 - 3.5.1.19 0.0000000000000000000000000000000000000000000000000000000000004 218.0
DYD1_k127_6182305_1 EamA-like transporter family - - - 0.0000000000000000000000000000000000000001167 160.0
DYD1_k127_6182305_2 This enzyme is involved in nucleotide metabolism it produces dUMP, the immediate precursor of thymidine nucleotides and it decreases the intracellular concentration of dUTP so that uracil cannot be incorporated into DNA K01520 - 3.6.1.23 0.0000000000000000000000000000000000000004635 156.0
DYD1_k127_6182305_3 Belongs to the Nudix hydrolase family K03574 - 3.6.1.55 0.000000000000000000000000158 108.0
DYD1_k127_6194465_0 PFAM Glycosyl transferase family 2 K20534 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004529 372.0
DYD1_k127_6194465_1 3-demethylubiquinone-9 3-O-methyltransferase activity - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000002579 302.0
DYD1_k127_6194465_2 3-beta hydroxysteroid dehydrogenase/isomerase family K01710,K01784,K08678 - 4.1.1.35,4.2.1.46,5.1.3.2 0.000009527 51.0
DYD1_k127_6196622_0 COGs COG0433 ATPase K06915 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003305 501.0
DYD1_k127_6196622_1 SbcCD cleaves DNA hairpin structures. These structures can inhibit DNA replication and are intermediates in certain DNA recombination reactions. The complex acts as a 3'- 5' double strand exonuclease that can open hairpins. It also has a 5' single-strand endonuclease activity K03547 - - 0.000000000000000000000000000000000000000000000000000000000000000000788 242.0
DYD1_k127_6196622_2 ABC transporter, substrate-binding protein, family 5 K02035 - - 0.000000000000000000000000000000000000000000000000000005719 209.0
DYD1_k127_6196622_3 Endoribonuclease L-PSP - - - 0.00000000000000000000000000000000001712 140.0
DYD1_k127_6196622_4 TPR-like protein K03353 GO:0000151,GO:0000152,GO:0000228,GO:0000775,GO:0000785,GO:0000790,GO:0000792,GO:0003674,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005634,GO:0005680,GO:0005694,GO:0005720,GO:0005721,GO:0005737,GO:0005829,GO:0006275,GO:0006464,GO:0006508,GO:0006511,GO:0006807,GO:0007088,GO:0007346,GO:0008150,GO:0008152,GO:0008156,GO:0009056,GO:0009057,GO:0009889,GO:0009890,GO:0009892,GO:0009896,GO:0009987,GO:0010498,GO:0010556,GO:0010558,GO:0010564,GO:0010605,GO:0010638,GO:0010965,GO:0016567,GO:0019219,GO:0019222,GO:0019538,GO:0019941,GO:0030071,GO:0030163,GO:0030174,GO:0031145,GO:0031323,GO:0031324,GO:0031326,GO:0031327,GO:0031331,GO:0031461,GO:0031618,GO:0031974,GO:0031981,GO:0032270,GO:0032297,GO:0032436,GO:0032446,GO:0032991,GO:0033043,GO:0033044,GO:0033045,GO:0033047,GO:0036211,GO:0043161,GO:0043170,GO:0043226,GO:0043227,GO:0043228,GO:0043229,GO:0043231,GO:0043232,GO:0043233,GO:0043412,GO:0043632,GO:0044237,GO:0044238,GO:0044248,GO:0044257,GO:0044260,GO:0044265,GO:0044267,GO:0044422,GO:0044424,GO:0044427,GO:0044428,GO:0044444,GO:0044446,GO:0044454,GO:0044464,GO:0045732,GO:0045787,GO:0045840,GO:0045842,GO:0045862,GO:0045931,GO:0045934,GO:0048518,GO:0048519,GO:0048522,GO:0048523,GO:0050789,GO:0050794,GO:0051052,GO:0051053,GO:0051128,GO:0051130,GO:0051171,GO:0051172,GO:0051247,GO:0051603,GO:0051726,GO:0051781,GO:0051783,GO:0051785,GO:0051983,GO:0051984,GO:0060255,GO:0062033,GO:0065007,GO:0070013,GO:0070647,GO:0071704,GO:0080090,GO:0090068,GO:0090329,GO:0098687,GO:1901564,GO:1901565,GO:1901575,GO:1901800,GO:1901970,GO:1901987,GO:1901989,GO:1901990,GO:1901992,GO:1902099,GO:1902101,GO:1902494,GO:1903052,GO:1903364,GO:1905818,GO:1905820,GO:1990234,GO:2000104,GO:2000112,GO:2000113,GO:2001252 - 0.00007818 50.0
DYD1_k127_6197525_0 radical SAM domain protein - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005043 480.0
DYD1_k127_6197525_1 ATP-dependent carboxylate-amine ligase which exhibits weak glutamate--cysteine ligase activity K06048 - - 0.00000000000000000000000000000000000000000000000000000000000000001889 229.0
DYD1_k127_6197525_2 Hydrolase Family 16 - - - 0.00000000000000000000000000000000000000000000000000000000000000002337 235.0
DYD1_k127_6197525_3 peroxiredoxin activity K00627,K01607 - 2.3.1.12,4.1.1.44 0.000000000000000000000000000000000000000000000007939 173.0
DYD1_k127_6197525_4 khg kdpg - - - 0.0000000000000000000000000000000000000000000601 168.0
DYD1_k127_6197525_5 von Willebrand factor, type A K07114 - - 0.000000006181 68.0
DYD1_k127_6200547_0 Transglycosylase K05365 - 2.4.1.129,3.4.16.4 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001276 528.0
DYD1_k127_6200547_1 PFAM Protein kinase domain K12132 - 2.7.11.1 0.00000000000001656 77.0
DYD1_k127_6200949_0 Radical SAM superfamily K04069 - 1.97.1.4 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000266 463.0
DYD1_k127_6200949_1 Thioredoxin K07396 - - 0.00000000000000000000000000000000000000000000000000000001741 203.0
DYD1_k127_6200949_2 Uncharacterised protein family UPF0047 - - - 0.00000000000000000000000000000000000000000000000000007582 189.0
DYD1_k127_6200949_3 Domain of unknown function (DUF4388) - - - 0.0000000000000000000005264 109.0
DYD1_k127_6200949_4 Surface antigen - - - 0.0000000000000443 84.0
DYD1_k127_6200949_5 PBS lyase HEAT-like repeat - - - 0.00000000001783 76.0
DYD1_k127_6200949_6 FHA domain protein - GO:0003674,GO:0005488,GO:0005515,GO:0005575,GO:0005576,GO:0005618,GO:0005623,GO:0005886,GO:0006109,GO:0006110,GO:0006140,GO:0006464,GO:0006468,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0009889,GO:0009890,GO:0009892,GO:0009894,GO:0009895,GO:0009987,GO:0010563,GO:0010675,GO:0010677,GO:0016020,GO:0016310,GO:0019219,GO:0019220,GO:0019222,GO:0019538,GO:0030312,GO:0030808,GO:0030809,GO:0030811,GO:0030812,GO:0031323,GO:0031324,GO:0031326,GO:0031327,GO:0031329,GO:0031330,GO:0036211,GO:0042325,GO:0042326,GO:0042802,GO:0043170,GO:0043412,GO:0043457,GO:0043467,GO:0043470,GO:0044237,GO:0044238,GO:0044260,GO:0044267,GO:0044464,GO:0045820,GO:0045912,GO:0045934,GO:0045936,GO:0045980,GO:0046777,GO:0048519,GO:0048523,GO:0050789,GO:0050794,GO:0051171,GO:0051172,GO:0051174,GO:0051193,GO:0051195,GO:0051196,GO:0051198,GO:0062012,GO:0062014,GO:0065007,GO:0071704,GO:0071944,GO:0080090,GO:1900371,GO:1900372,GO:1900542,GO:1900543,GO:1901564,GO:1903578,GO:1903579,GO:2001169,GO:2001170 - 0.0000000006339 71.0
DYD1_k127_6200949_7 zinc-ribbon domain - - - 0.000000003227 66.0
DYD1_k127_6200949_8 Type II/IV secretion system protein K02669 - - 0.0000000819 64.0
DYD1_k127_6201500_0 response regulator receiver K07714,K10943 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000007485 288.0
DYD1_k127_6201500_1 ABC transporter, substrate-binding protein, family 5 K02035 - - 0.000000000000000000000000000000001691 141.0
DYD1_k127_6201500_2 Protein of unknown function (DUF692) K09930 - - 0.0000000000000000000000000000007777 134.0
DYD1_k127_6205754_0 Belongs to the RNA methyltransferase TrmD family K00554 - 2.1.1.228 0.0000000000000000000000000000000000000000000000000000000000000000000000000001011 263.0
DYD1_k127_6205754_1 Endonuclease that specifically degrades the RNA of RNA- DNA hybrids K03470 GO:0003674,GO:0003824,GO:0004518,GO:0004519,GO:0004521,GO:0004523,GO:0004540,GO:0005575,GO:0005622,GO:0005623,GO:0006139,GO:0006259,GO:0006260,GO:0006261,GO:0006271,GO:0006273,GO:0006281,GO:0006298,GO:0006401,GO:0006725,GO:0006807,GO:0006950,GO:0006974,GO:0008150,GO:0008152,GO:0009056,GO:0009057,GO:0009058,GO:0009059,GO:0009987,GO:0016070,GO:0016787,GO:0016788,GO:0016891,GO:0016893,GO:0019439,GO:0022616,GO:0032299,GO:0032991,GO:0033554,GO:0033567,GO:0034641,GO:0034645,GO:0034655,GO:0043137,GO:0043170,GO:0044237,GO:0044238,GO:0044248,GO:0044249,GO:0044260,GO:0044265,GO:0044270,GO:0044424,GO:0044464,GO:0046483,GO:0046700,GO:0050896,GO:0051716,GO:0071704,GO:0090304,GO:0090305,GO:0090501,GO:0090502,GO:0140098,GO:1901360,GO:1901361,GO:1901575,GO:1901576 3.1.26.4 0.00000000000000000000000000000000000000000000000000000108 200.0
DYD1_k127_6205754_2 Tetratricopeptide repeats - - - 0.000000000000000000000000000000000000000004782 173.0
DYD1_k127_6205754_3 This protein is located at the 30S-50S ribosomal subunit interface and may play a role in the structure and function of the aminoacyl-tRNA binding site K02884 - - 0.0000000000000000000000000000000000002261 144.0
DYD1_k127_6210181_0 Cytochrome c554 and c-prime - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001332 453.0
DYD1_k127_6210181_1 - - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006336 374.0
DYD1_k127_6210181_2 Glucose-6-phosphate dehydrogenase subunit - - - 0.000000000000000000000000000000000000000000003176 178.0
DYD1_k127_621301_0 4Fe-4S binding domain - - - 2.022e-258 819.0
DYD1_k127_6229617_0 aminopeptidase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001107 450.0
DYD1_k127_6229617_1 Cysteine-rich motif following a subset of SET domains K07117 - - 0.0000008455 51.0
DYD1_k127_6238573_0 Tetratricopeptide repeat - - - 0.00000000000000000000000000000000000000000000000000000000000000001384 247.0
DYD1_k127_6238573_1 CHASE3 domain - - - 0.00000000000000000000000003407 111.0
DYD1_k127_6238573_2 TPR repeat Sel1-like repeat Tetratricopeptide TPR_3 Tetratricopeptide TPR_2 - - - 0.00000000000004092 82.0
DYD1_k127_6249273_0 PFAM ABC-2 type transporter K01992 - - 0.000000000000000000000000000000000000000000000000005194 190.0
DYD1_k127_6249273_1 transport system involved in gliding motility, auxiliary component - - - 0.00000000000000000000000000000000000000000000001981 189.0
DYD1_k127_6249273_2 ABC transporter K01990 - - 0.0000000000000000000000000000000000000003077 155.0
DYD1_k127_6256016_0 serine threonine protein kinase K08884,K12132 GO:0002237,GO:0003674,GO:0003824,GO:0004672,GO:0004674,GO:0005488,GO:0005539,GO:0005575,GO:0005623,GO:0005886,GO:0006464,GO:0006468,GO:0006793,GO:0006796,GO:0006807,GO:0007154,GO:0007165,GO:0008150,GO:0008152,GO:0009605,GO:0009607,GO:0009617,GO:0009719,GO:0009847,GO:0009987,GO:0010033,GO:0010243,GO:0016020,GO:0016301,GO:0016310,GO:0016740,GO:0016772,GO:0016773,GO:0019538,GO:0023052,GO:0032494,GO:0032502,GO:0036211,GO:0042221,GO:0042834,GO:0043170,GO:0043207,GO:0043412,GO:0044237,GO:0044238,GO:0044260,GO:0044267,GO:0044464,GO:0050789,GO:0050794,GO:0050896,GO:0051704,GO:0051707,GO:0051716,GO:0065007,GO:0070887,GO:0071216,GO:0071219,GO:0071224,GO:0071310,GO:0071417,GO:0071495,GO:0071704,GO:0071944,GO:0097367,GO:0140096,GO:1901564,GO:1901698,GO:1901699,GO:1901700,GO:1901701 2.7.11.1 0.00000000000000000000000000000000000000000000000000008207 207.0
DYD1_k127_6256016_1 serine threonine protein kinase K08884,K12132 - 2.7.11.1 0.0000000000000000000000000000000000000000000000000001499 206.0
DYD1_k127_6259255_0 Peptidase family S58 K01266 - 3.4.11.19 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002643 413.0
DYD1_k127_6259255_1 May play a role in DNA repair. It seems to be involved in an RecBC-independent recombinational process of DNA repair. It may act with RecF and RecO K06187 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000003705 254.0
DYD1_k127_6259255_2 Binds to DNA and alters its conformation. May be involved in regulation of gene expression, nucleoid organization and DNA protection K06187,K09747 GO:0003674,GO:0003676,GO:0003677,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0044424,GO:0044444,GO:0044464,GO:0097159,GO:1901363 - 0.000000000000000000000002182 105.0
DYD1_k127_6262564_0 Bacitracin resistance protein BacA K06153 - 3.6.1.27 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000006884 280.0
DYD1_k127_6262564_1 Oxygen tolerance - - - 0.00000005014 65.0
DYD1_k127_6262564_2 - - - - 0.0000001125 60.0
DYD1_k127_6269514_0 PFAM Adenylate and Guanylate cyclase catalytic domain K01768 - 4.6.1.1 0.000000000000000000000000000000000000000000000000000069 193.0
DYD1_k127_6269514_1 His Kinase A (phosphoacceptor) domain K02482 - 2.7.13.3 0.000000000009991 77.0
DYD1_k127_6276088_0 Pfam SNARE associated Golgi protein - - - 1.399e-208 671.0
DYD1_k127_6276088_1 translation release factor activity - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001626 389.0
DYD1_k127_6276088_2 Type I phosphodiesterase / nucleotide pyrophosphatase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000001583 262.0
DYD1_k127_6276088_3 Oxidoreductase - - - 0.0000000000000001646 91.0
DYD1_k127_6294548_0 Putative modulator of DNA gyrase K03568 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001772 488.0
DYD1_k127_6294548_1 Enoyl-CoA hydratase/isomerase K01715 - 4.2.1.17 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001669 322.0
DYD1_k127_6294548_2 Putative modulator of DNA gyrase K03592 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000003388 269.0
DYD1_k127_6297859_0 Glycosyltransferase like family 2 - - - 0.00007648 55.0
DYD1_k127_629862_0 PFAM UvrD REP helicase K03657 - 3.6.4.12 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001281 539.0
DYD1_k127_6303135_0 protein conserved in bacteria - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000155 420.0
DYD1_k127_6311443_0 Involved in mRNA degradation. Catalyzes the phosphorolysis of single-stranded polyribonucleotides processively in the 3'- to 5'-direction K00962 - 2.7.7.8 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000007801 302.0
DYD1_k127_6311443_1 Barrel-sandwich domain of CusB or HlyD membrane-fusion K02005 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000001976 302.0
DYD1_k127_6311443_2 ADP-heptose-lipopolysaccharide heptosyltransferase activity K02841,K02843 - - 0.00000000000000000000000000000000000000173 159.0
DYD1_k127_6311443_3 6-pyruvoyl tetrahydropterin synthase K01737 - 4.1.2.50,4.2.3.12 0.000000000000000000000000000000000000006865 149.0
DYD1_k127_6311443_4 One of the primary rRNA binding proteins, it binds directly to 16S rRNA where it helps nucleate assembly of the platform of the 30S subunit by binding and bridging several RNA helices of the 16S rRNA K02956 GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0015935,GO:0022626,GO:0022627,GO:0032991,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:1990904 - 0.0000000000000000000000000000003771 124.0
DYD1_k127_6311443_5 Belongs to the small heat shock protein (HSP20) family K13993 - - 0.000000000000000000000000002248 116.0
DYD1_k127_6313539_0 Involved in the restart of stalled replication forks. Recognizes and binds the arrested nascent DNA chain at stalled replication forks. It can open the DNA duplex, via its helicase activity, and promote assembly of the primosome and loading of the major replicative helicase DnaB onto DNA K04066 GO:0003674,GO:0003678,GO:0003824,GO:0004003,GO:0004386,GO:0006139,GO:0006259,GO:0006260,GO:0006261,GO:0006268,GO:0006270,GO:0006281,GO:0006302,GO:0006310,GO:0006725,GO:0006807,GO:0006950,GO:0006974,GO:0006996,GO:0008026,GO:0008094,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0016043,GO:0016462,GO:0016787,GO:0016817,GO:0016818,GO:0016887,GO:0017111,GO:0032392,GO:0032508,GO:0033554,GO:0034641,GO:0034645,GO:0042623,GO:0043138,GO:0043140,GO:0043170,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0046483,GO:0050896,GO:0051276,GO:0051716,GO:0070035,GO:0071103,GO:0071704,GO:0071840,GO:0090304,GO:0140097,GO:1901360,GO:1901576 - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001908 549.0
DYD1_k127_6313539_1 Involved in lipid A export and possibly also in glycerophospholipid export and for biogenesis of the outer membrane. Transmembrane domains (TMD) form a pore in the inner membrane and the ATP-binding domain (NBD) is responsible for energy generation K06147,K11085 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001756 454.0
DYD1_k127_6313539_2 Catalyzes two steps in the biosynthesis of coenzyme A. In the first step cysteine is conjugated to 4'-phosphopantothenate to form 4-phosphopantothenoylcysteine, in the latter compound is decarboxylated to form 4'-phosphopantotheine K01598,K13038 - 4.1.1.36,6.3.2.5 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003676 360.0
DYD1_k127_6313539_3 TIGRFAM Phage SPO1 DNA polymerase-related protein K21929 - 3.2.2.27 0.00000000000000000000000000000000000000000000000000000000000001066 224.0
DYD1_k127_6313539_4 TIGR00255 family - - - 0.00000000000000000000000000000000000000000000000000000000003927 215.0
DYD1_k127_6313539_5 Essential for recycling GMP and indirectly, cGMP K00942 GO:0003674,GO:0003824,GO:0004385,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006139,GO:0006163,GO:0006725,GO:0006753,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009116,GO:0009117,GO:0009119,GO:0009123,GO:0009126,GO:0009132,GO:0009135,GO:0009150,GO:0009161,GO:0009165,GO:0009167,GO:0009179,GO:0009185,GO:0009259,GO:0009987,GO:0016301,GO:0016310,GO:0016740,GO:0016772,GO:0016776,GO:0018130,GO:0019205,GO:0019438,GO:0019637,GO:0019693,GO:0034641,GO:0034654,GO:0042278,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0044424,GO:0044444,GO:0044464,GO:0046037,GO:0046128,GO:0046483,GO:0046710,GO:0046940,GO:0050145,GO:0055086,GO:0071704,GO:0072521,GO:0090407,GO:1901068,GO:1901135,GO:1901293,GO:1901360,GO:1901362,GO:1901564,GO:1901576,GO:1901657 2.7.4.8 0.000000000000000000000000000000000000000000000000002969 189.0
DYD1_k127_6313539_6 Belongs to the UPF0296 family K09777 - - 0.0000000000000000000000008075 106.0
DYD1_k127_6313539_7 Promotes RNA polymerase assembly. Latches the N- and C- terminal regions of the beta' subunit thereby facilitating its interaction with the beta and alpha subunits K03060 - 2.7.7.6 0.000001232 53.0
DYD1_k127_6314500_0 Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family K15726 - - 0.0 1335.0
DYD1_k127_6314500_1 Barrel-sandwich domain of CusB or HlyD membrane-fusion - - - 0.00000000000000000000000000000000000000000000000000000000004692 211.0
DYD1_k127_6315371_0 Sulfatase - - - 0.00000000000000000000000000000000000000000000000001226 204.0
DYD1_k127_6315371_1 PFAM type I phosphodiesterase nucleotide pyrophosphatase - - - 0.00000003163 63.0
DYD1_k127_6316704_0 peptidase K01354 - 3.4.21.83 2.708e-260 819.0
DYD1_k127_6316704_1 Catalyzes the conversion of 3'-phosphate to a 2',3'- cyclic phosphodiester at the end of RNA. The mechanism of action of the enzyme occurs in 3 steps (A) adenylation of the enzyme by ATP K01974 - 6.5.1.4 0.00000000000000000000000000000005677 129.0
DYD1_k127_6316704_2 RNA 3'-terminal phosphate cyclase (RTC), insert domain - - - 0.0000000000000000000000000000007633 124.0
DYD1_k127_6319772_0 Peptidase family M50 K11749 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000003971 278.0
DYD1_k127_6319772_1 Belongs to the low molecular weight phosphotyrosine protein phosphatase family K01104 - 3.1.3.48 0.000000000000000002531 90.0
DYD1_k127_6336787_0 Bifunctional purine biosynthesis protein PurH K00602 - 2.1.2.3,3.5.4.10 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000005629 295.0
DYD1_k127_6336787_1 Bifunctional purine biosynthesis protein PurH K00602 - 2.1.2.3,3.5.4.10 0.000000000000000000000000000000000000000000000000000000000000000000001953 242.0
DYD1_k127_6336787_2 hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in linear amides - - - 0.000000000009469 71.0
DYD1_k127_6336787_3 Poorly processive, error-prone DNA polymerase involved in untargeted mutagenesis. Copies undamaged DNA at stalled replication forks, which arise in vivo from mismatched or misaligned primer ends. These misaligned primers can be extended by PolIV. Exhibits no 3'-5' exonuclease (proofreading) activity. May be involved in translesional synthesis, in conjunction with the beta clamp from PolIII K02346 GO:0000731,GO:0003674,GO:0003824,GO:0003887,GO:0005575,GO:0005622,GO:0005623,GO:0005634,GO:0005654,GO:0005737,GO:0006139,GO:0006259,GO:0006260,GO:0006281,GO:0006301,GO:0006725,GO:0006807,GO:0006950,GO:0006974,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0016604,GO:0016607,GO:0016740,GO:0016772,GO:0016779,GO:0018130,GO:0019438,GO:0019985,GO:0031974,GO:0031981,GO:0032991,GO:0033554,GO:0034061,GO:0034641,GO:0034645,GO:0034654,GO:0035770,GO:0036464,GO:0042276,GO:0043170,GO:0043226,GO:0043227,GO:0043228,GO:0043229,GO:0043231,GO:0043232,GO:0043233,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044271,GO:0044422,GO:0044424,GO:0044428,GO:0044444,GO:0044446,GO:0044451,GO:0044464,GO:0046483,GO:0050896,GO:0051716,GO:0070013,GO:0071704,GO:0071897,GO:0090304,GO:0140097,GO:1901360,GO:1901362,GO:1901576,GO:1990904 2.7.7.7 0.0000006276 60.0
DYD1_k127_6336847_0 Pregnancy-associated plasma protein-A - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001886 331.0
DYD1_k127_6336847_1 Subtilase family - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001961 339.0
DYD1_k127_6336847_2 Pregnancy-associated plasma protein-A - - - 0.000000000000000000000000000000000000000000000000000000000000000855 221.0
DYD1_k127_6336847_3 Pregnancy-associated plasma protein-A - - - 0.00000000000000000000000000000000000000000005164 168.0
DYD1_k127_6336847_4 RNA recognition motif - - - 0.0000000000000000000005622 100.0
DYD1_k127_6336847_5 diguanylate cyclase - - - 0.0000000000000001572 89.0
DYD1_k127_6336847_6 Glucose-regulated metallo-peptidase M90 K09933 - - 0.00008974 52.0
DYD1_k127_6352148_0 PFAM SAICAR synthetase K01923,K13713 - 6.3.2.6,6.3.4.13 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001193 383.0
DYD1_k127_6352148_1 Subtilase family K13276,K17734 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000577 350.0
DYD1_k127_6352148_2 amine dehydrogenase activity - - - 0.00000000000000000000000000000000000000000000000000000003702 205.0
DYD1_k127_6352148_3 Prevents misfolding and promotes the refolding and proper assembly of unfolded polypeptides generated under stress conditions K04077 - - 0.00000000000000000000000000000000000000000000000000001431 190.0
DYD1_k127_6352148_4 Membrane - - - 0.00000000000000000000000000000000000000000000000006436 192.0
DYD1_k127_6352148_5 Binds to Cpn60 in the presence of Mg-ATP and suppresses the ATPase activity of the latter K04078 - - 0.00000000000000000000000000000000003241 137.0
DYD1_k127_6352148_6 Belongs to the sigma-70 factor family. ECF subfamily K03088 - - 0.0000000000000000000000000000005352 129.0
DYD1_k127_6352148_7 TIGRFAM 40-residue YVTN family beta-propeller repeat - - - 0.0000007086 54.0
DYD1_k127_6352148_8 An anti-sigma factor for extracytoplasmic function (ECF) sigma factor SigK. ECF sigma factors are held in an inactive form by an anti-sigma factor until released by regulated intramembrane proteolysis (RIP). RIP occurs when an extracytoplasmic signal triggers a concerted proteolytic cascade to transmit information and elicit cellular responses. The membrane-spanning regulatory substrate protein is first cut extracytoplasmically (site-1 protease, S1P), then within the membrane itself (site-2 protease, S2P, Rip1), while cytoplasmic proteases finish degrading the regulatory protein, liberating the sigma factor - - - 0.0001436 51.0
DYD1_k127_6361448_0 PBS lyase HEAT-like repeat - - - 0.0000000000000003462 90.0
DYD1_k127_6361448_1 Hypothethical protein - - - 0.00000000004043 68.0
DYD1_k127_6369479_0 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III K01835 - 5.4.2.2 1.747e-256 800.0
DYD1_k127_6369479_1 S53, subtilisin kexin sedolisin - - - 0.0000000000000000000000000000000000000000000000000000000000000004682 236.0
DYD1_k127_6369479_2 Enoyl-CoA hydratase K07537 - 4.2.1.100 0.0000000000000000000000000000000000000000000000000000000001984 215.0
DYD1_k127_6369479_3 D-Ala-D-Ala carboxypeptidase 3 (S13) family K07259 - 3.4.16.4 0.000000000000000000000000000000000000000000005047 173.0
DYD1_k127_6381470_0 Tetratricopeptide repeat - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001021 371.0
DYD1_k127_6381470_1 Catalyzes the decarboxylation of 3-octaprenyl-4-hydroxy benzoate to 2-octaprenylphenol, an intermediate step in ubiquinone biosynthesis K03182 - 4.1.1.98 0.000000000000000000000001136 103.0
DYD1_k127_6381470_2 Catalyzes the decarboxylation of 3-octaprenyl-4-hydroxy benzoate to 2-octaprenylphenol, an intermediate step in ubiquinone biosynthesis K03182 - 4.1.1.98 0.00003364 46.0
DYD1_k127_6381470_3 nuclear chromosome segregation - - - 0.00004383 52.0
DYD1_k127_6413982_0 integral membrane protein - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001312 541.0
DYD1_k127_6413982_1 Is required not only for elongation of protein synthesis but also for the initiation of all mRNA translation through initiator tRNA(fMet) aminoacylation K01874,K01890,K04566,K06878 - 6.1.1.10,6.1.1.20,6.1.1.6 0.000000000000000000000000000000000000000002489 162.0
DYD1_k127_6413982_2 PFAM FAD dependent oxidoreductase K15736 - - 0.000000000000000000000001825 107.0
DYD1_k127_6413982_3 Disulphide bond corrector protein DsbC K04084,K06888 - 1.8.1.8 0.000000000000003758 82.0
DYD1_k127_6413982_4 lipid kinase activity - - - 0.000000001333 64.0
DYD1_k127_6414073_0 WD40-like Beta Propeller Repeat K03641,K07277 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001792 462.0
DYD1_k127_6415843_0 PFAM UbiA prenyltransferase K03179 - 2.5.1.39 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000001753 289.0
DYD1_k127_6415843_1 Glycosyltransferase like family 2 - - - 0.0000000000000000000000000000000000000000000000000000000000000004479 229.0
DYD1_k127_6415843_2 Flavin prenyltransferase that catalyzes the synthesis of the prenylated FMN cofactor (prenyl-FMN) for K03186 - 2.5.1.129 0.0000000000000000000000000000000000000000000000000004288 190.0
DYD1_k127_6415843_3 Transcriptional regulatory protein, C terminal K07658,K07668 - - 0.000000000000005088 79.0
DYD1_k127_6417648_0 D-alanyl-D-alanine carboxypeptidase K07259 - 3.4.16.4 0.000000000000000000000000000000000000000000000000000000000003293 223.0
DYD1_k127_6417648_1 Universal stress protein family - - - 0.000000000000000000000000000001331 125.0
DYD1_k127_6417648_2 Protein tyrosine kinase - - - 0.0000000001795 66.0
DYD1_k127_6417760_0 Belongs to the aldehyde dehydrogenase family K00140,K22187 - 1.2.1.18,1.2.1.27 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006455 340.0
DYD1_k127_6417760_1 IgA Peptidase M64 - - - 0.00000000000000000000000000000000000000000000000000000000000004146 230.0
DYD1_k127_6420646_0 LamB/YcsF family K07160 - - 0.000000000000000000000000000000000000000000000000000003021 197.0
DYD1_k127_6420646_1 PFAM AAA ATPase central domain protein - - - 0.00000000000000000000000000000000000000000000000000004512 198.0
DYD1_k127_6420646_2 Allophanate hydrolase subunit 1 - - - 0.000000000000000000000000000000000001079 149.0
DYD1_k127_6420646_3 GHMP kinases C terminal K07031 - 2.7.1.168 0.00000000000000000000000000000000002078 141.0
DYD1_k127_6420646_4 GHMP kinase K00869,K07031 - 2.7.1.168,2.7.1.36 0.000000000000000000000000000000006534 132.0
DYD1_k127_6425525_0 Tetratricopeptide repeats K12132 - 2.7.11.1 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002552 387.0
DYD1_k127_6425525_1 Tetratricopeptide repeat - - - 0.0000001593 55.0
DYD1_k127_6444549_0 Glycyl-tRNA synthetase alpha subunit K01878 - 6.1.1.14 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003018 395.0
DYD1_k127_6444549_1 PFAM Transglycosylase SLT domain K08307 - - 0.000000000000000000000000000000000000000000000000000000000000000000000001466 261.0
DYD1_k127_6444549_2 glycyl-tRNA synthetase, beta K01879 - 6.1.1.14 0.00000000000000000000000000000000000000000000000000000000000006764 223.0
DYD1_k127_6444549_3 Transglycosylase SLT domain - - - 0.00000000000000000000000000000000000000007924 160.0
DYD1_k127_6444549_4 Involved in DNA repair and RecF pathway recombination K03474,K03584 GO:0008150,GO:0009314,GO:0009628,GO:0050896 2.6.99.2 0.00000000000000000000000000000005509 135.0
DYD1_k127_6444549_5 Mitochondrial biogenesis AIM24 - - - 0.000002652 61.0
DYD1_k127_6446907_0 Glycosyltransferase 36 associated - - - 7.761e-303 955.0
DYD1_k127_6446907_1 Glycosyl hydrolase 36 superfamily, catalytic domain K13688 - - 4.342e-247 799.0
DYD1_k127_6446907_2 cellulose binding - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001423 558.0
DYD1_k127_6465250_0 signal transduction protein containing a membrane domain an EAL and a GGDEF domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000003913 276.0
DYD1_k127_6467929_0 transferase activity, transferring glycosyl groups - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000003355 260.0
DYD1_k127_6467929_1 Bacterial extracellular solute-binding proteins, family 5 Middle K02035 - - 0.000000000000000000000000000000002232 137.0
DYD1_k127_6474147_0 Prokaryotic N-terminal methylation motif K02456 - - 0.000000000000000000000000000000000005787 144.0
DYD1_k127_6474147_1 general secretion pathway protein K02456 - - 0.00000000000000000000000000009296 119.0
DYD1_k127_6483843_0 Helix-hairpin-helix class 2 (Pol1 family) motifs - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005529 357.0
DYD1_k127_6483843_1 - - - - 0.00000000000000000000000000000000000000000000000000000000000000000000003794 248.0
DYD1_k127_6483843_2 MacB-like periplasmic core domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000001121 248.0
DYD1_k127_6483843_3 Belongs to the Dps family K03594 - 1.16.3.1 0.00000000000000000000000000000000000000000000000000000000005407 207.0
DYD1_k127_6483843_4 Transcriptional regulator PadR-like family - - - 0.000000000000000000000000000000000004056 139.0
DYD1_k127_6483843_5 Psort location Cytoplasmic, score - - - 0.00000000000000000641 92.0
DYD1_k127_6483843_6 efflux transmembrane transporter activity - - - 0.00000000001659 74.0
DYD1_k127_6483843_7 Psort location Cytoplasmic, score - - - 0.0000002647 61.0
DYD1_k127_6490016_0 Pfam Transposase IS66 - - - 0.00000000000000000000000000000000000000000000006449 187.0
DYD1_k127_6490016_1 SMART ATP-binding region ATPase domain protein K02030,K07710 - 2.7.13.3 0.00000000000000000000005185 109.0
DYD1_k127_6490558_0 Involved in cell wall formation. Catalyzes the final step in the synthesis of UDP-N-acetylmuramoyl-pentapeptide, the precursor of murein K01929,K15792 - 6.3.2.10,6.3.2.13 0.0000000000000000000000000000000000000000000000000000000000000000000000000000005934 281.0
DYD1_k127_6490558_1 Catalyzes the addition of meso-diaminopimelic acid to the nucleotide precursor UDP-N-acetylmuramoyl-L-alanyl-D-glutamate (UMAG) in the biosynthesis of bacterial cell-wall peptidoglycan K01928 - 6.3.2.13 0.000000000000000000000000000000000000000009648 157.0
DYD1_k127_6515841_0 The glycine cleavage system catalyzes the degradation of glycine. The P protein binds the alpha-amino group of glycine through its pyridoxal phosphate cofactor K00281,K00282 GO:0001505,GO:0003674,GO:0003824,GO:0004375,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005960,GO:0006082,GO:0006520,GO:0006544,GO:0006807,GO:0008150,GO:0008152,GO:0009069,GO:0009987,GO:0016491,GO:0016638,GO:0016642,GO:0017144,GO:0019752,GO:0032991,GO:0042133,GO:0043436,GO:0044237,GO:0044238,GO:0044281,GO:0044424,GO:0044444,GO:0044464,GO:0055114,GO:0065007,GO:0065008,GO:0071704,GO:1901564,GO:1901605,GO:1902494,GO:1990204 1.4.4.2 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001327 468.0
DYD1_k127_6515841_1 The glycine cleavage system catalyzes the degradation of glycine K00605 - 2.1.2.10 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001109 386.0
DYD1_k127_6515841_2 The glycine cleavage system catalyzes the degradation of glycine. The P protein binds the alpha-amino group of glycine through its pyridoxal phosphate cofactor K00283 - 1.4.4.2 0.0000000000000000000000000000000000000000001108 163.0
DYD1_k127_6515841_3 The glycine cleavage system catalyzes the degradation of glycine. The H protein shuttles the methylamine group of glycine from the P protein to the T protein K02437 - - 0.0000000000000000000000000000000000000001807 153.0
DYD1_k127_651631_0 Catalyzes the conversion of 3-deoxy-D-arabino- heptulosonate 7-phosphate (DAHP) to dehydroquinate (DHQ) K01735,K13829 - 2.7.1.71,4.2.3.4 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000001002 297.0
DYD1_k127_651631_1 PQQ-like domain - - - 0.000000000000000002666 98.0
DYD1_k127_655241_0 cation diffusion facilitator family transporter K16264 - - 0.00000000000000000000000000000000000000000000000000000000000000007333 232.0
DYD1_k127_655241_1 Thioredoxin-like domain - - - 0.00000000000000000000000000000000000000007332 162.0
DYD1_k127_655241_2 Interacts with outer membrane receptor proteins that carry out high-affinity binding and energy dependent uptake into the periplasmic space of specific substrates. It could act to transduce energy from the cytoplasmic membrane to specific energy- requiring processes in the outer membrane, resulting in the release into the periplasm of ligands bound by these outer membrane proteins K03832 - - 0.00000000004249 72.0
DYD1_k127_6553331_0 Domain of unknown function (DUF4968) - - - 0.00000000000102 75.0
DYD1_k127_6553331_1 Converts heme B (protoheme IX) to heme O by substitution of the vinyl group on carbon 2 of heme B porphyrin ring with a hydroxyethyl farnesyl side group K02257 GO:0003674,GO:0003824,GO:0004311,GO:0004659,GO:0005575,GO:0005623,GO:0005886,GO:0006091,GO:0006725,GO:0006778,GO:0006779,GO:0006783,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009987,GO:0015980,GO:0016020,GO:0016740,GO:0016765,GO:0018130,GO:0019438,GO:0033013,GO:0033014,GO:0034641,GO:0042168,GO:0042440,GO:0044237,GO:0044249,GO:0044271,GO:0044464,GO:0045333,GO:0046148,GO:0046483,GO:0051186,GO:0051188,GO:0055114,GO:0071704,GO:0071944,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576 2.5.1.141 0.000000000003385 79.0
DYD1_k127_6554573_0 mannose-6-phosphate isomerase - - - 0.000000000000000000000000000000000000005989 147.0
DYD1_k127_6554573_1 HEPN domain - - - 0.0000000000000000000000000001029 119.0
DYD1_k127_6554573_2 DNA-templated transcription, initiation K03088 - - 0.000000000000000000000001354 108.0
DYD1_k127_6554573_3 Nucleotidyltransferase domain K07076 - - 0.00000000000000008561 83.0
DYD1_k127_6554573_4 YCII-related domain - - - 0.000000000001136 76.0
DYD1_k127_6554573_5 Putative adhesin - - - 0.0000001871 62.0
DYD1_k127_6561907_0 ATPase family associated with various cellular activities (AAA) K03924 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009169 376.0
DYD1_k127_6561907_1 Acetyltransferase (GNAT) domain K03790 - 2.3.1.128 0.00000000000000000000000000000000306 135.0
DYD1_k127_6561907_2 - - - - 0.000000000003149 67.0
DYD1_k127_6561907_3 - - - - 0.000000002033 62.0
DYD1_k127_6568464_0 von Willebrand factor type A domain K07114 - - 0.0000000000000000000000000000000000000000000000000006593 200.0
DYD1_k127_65689_0 Hypothetical methyltransferase K00574,K07755 - 2.1.1.137,2.1.1.79 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000041 302.0
DYD1_k127_65689_1 TonB dependent receptor K02014 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000009692 312.0
DYD1_k127_6576608_0 Conserved protein - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000009036 256.0
DYD1_k127_6577135_0 Glucose / Sorbosone dehydrogenase - - - 7.526e-218 703.0
DYD1_k127_6577135_1 methyltransferase K18846 - 2.1.1.180 0.000000000000000000000000000000114 131.0
DYD1_k127_6582671_0 Protein tyrosine kinase K12132 - 2.7.11.1 0.0000000000000000000000000000000000000000000000000000000000000000000328 245.0
DYD1_k127_6582671_1 - - - - 0.00000000000000000000000000000008901 135.0
DYD1_k127_6582671_2 adenylyl cyclase class-3 4 guanylyl cyclase K01768 - 4.6.1.1 0.0000000000000000000000007159 116.0
DYD1_k127_6582671_3 - - - - 0.0000000000000001959 81.0
DYD1_k127_6590324_0 PFAM UvrD REP helicase K03657 - 3.6.4.12 1.091e-196 634.0
DYD1_k127_6590324_1 Belongs to the Glu Leu Phe Val dehydrogenases family K00261 - 1.4.1.3 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001518 322.0
DYD1_k127_6590324_2 Catalyzes the hydrolysis of UDP-3-O-myristoyl-N- acetylglucosamine to form UDP-3-O-myristoylglucosamine and acetate, the committed step in lipid A biosynthesis K02535 - 3.5.1.108 0.000000000000000000000000000000000000000000000000000000000000000000000000000000001412 280.0
DYD1_k127_6590324_3 PFAM MotA TolQ ExbB proton channel K03562 - - 0.0000000000000000000000000000000000000000000000001298 186.0
DYD1_k127_6590324_4 PFAM Biopolymer transport protein ExbD TolR K03560 - - 0.0000000000000000000000001184 112.0
DYD1_k127_6590324_5 - - - - 0.000002563 57.0
DYD1_k127_6590324_6 COG0810 Periplasmic protein TonB, links inner and outer membranes K03832 - - 0.0006389 51.0
DYD1_k127_6593208_0 Periplasmic binding protein - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000854 478.0
DYD1_k127_6593208_1 methyl-accepting chemotaxis protein - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000001084 291.0
DYD1_k127_6593208_2 Protein of unknown function (DUF2911) - - - 0.000000000000000000000000000000000000000000000000000000000000000006168 236.0
DYD1_k127_6593208_3 Transcriptional regulator PadR-like family - - - 0.000000000000000000000000000002632 128.0
DYD1_k127_6593208_4 Tetratricopeptide repeat - - - 0.0000000000001774 79.0
DYD1_k127_6595153_0 transcriptional regulator K12146,K15836 GO:0003674,GO:0003676,GO:0003677,GO:0005488,GO:0006139,GO:0006351,GO:0006352,GO:0006355,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009889,GO:0009987,GO:0010467,GO:0010468,GO:0010556,GO:0016070,GO:0018130,GO:0019219,GO:0019222,GO:0019438,GO:0031323,GO:0031326,GO:0032774,GO:0034641,GO:0034645,GO:0034654,GO:0043170,GO:0043254,GO:0044087,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044271,GO:0046483,GO:0050789,GO:0050794,GO:0051128,GO:0051171,GO:0051252,GO:0060255,GO:0065007,GO:0071704,GO:0080090,GO:0090304,GO:0097159,GO:0097659,GO:1901360,GO:1901362,GO:1901363,GO:1901576,GO:1903506,GO:2000112,GO:2000142,GO:2001141 - 0.00000000000000000000000000000000000000000000000001596 195.0
DYD1_k127_6595153_1 protein kinase activity - - - 0.00000000000000000007285 104.0
DYD1_k127_6599703_0 succinyl-diaminopimelate desuccinylase activity - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002444 577.0
DYD1_k127_6599703_2 - - - - 0.00000000003832 74.0
DYD1_k127_6670939_0 PFAM Carbamoyl-phosphate synthase L chain K01955 GO:0000050,GO:0003674,GO:0003824,GO:0004087,GO:0004088,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006082,GO:0006520,GO:0006525,GO:0006526,GO:0006807,GO:0008150,GO:0008152,GO:0008652,GO:0009058,GO:0009064,GO:0009084,GO:0009987,GO:0016053,GO:0016874,GO:0016879,GO:0016884,GO:0019627,GO:0019752,GO:0034641,GO:0043436,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0044283,GO:0044424,GO:0044464,GO:0046394,GO:0071704,GO:0071941,GO:1901564,GO:1901566,GO:1901576,GO:1901605,GO:1901607 6.3.5.5 0.0 1100.0
DYD1_k127_6670939_1 carbamoyl-phosphate synthase (glutamine-hydrolyzing) activity K01956 GO:0000050,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005951,GO:0006082,GO:0006520,GO:0006525,GO:0006526,GO:0006807,GO:0008150,GO:0008152,GO:0008652,GO:0009058,GO:0009064,GO:0009084,GO:0009987,GO:0016053,GO:0019627,GO:0019752,GO:0032991,GO:0034641,GO:0040007,GO:0043436,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0044283,GO:0044424,GO:0044444,GO:0044464,GO:0046394,GO:0071704,GO:0071941,GO:1901564,GO:1901566,GO:1901576,GO:1901605,GO:1901607,GO:1902494 6.3.5.5 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004573 410.0
DYD1_k127_6670939_2 TonB-dependent receptor - - - 0.0001846 49.0
DYD1_k127_6680621_0 Catalyzes the reversible phosphatidyl group transfer from one phosphatidylglycerol molecule to another to form cardiolipin (CL) (diphosphatidylglycerol) and glycerol - - - 0.00000000000000000000000002241 116.0
DYD1_k127_6680621_1 Integral membrane protein CcmA involved in cell shape determination - - - 0.0000003499 57.0
DYD1_k127_6684198_0 Peptide chain release factor 2 directs the termination of translation in response to the peptide chain termination codons UGA and UAA K02836 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003073 377.0
DYD1_k127_6684198_1 Transfers the 4'-phosphopantetheine moiety from coenzyme A to a Ser of acyl-carrier-protein K00997 - 2.7.8.7 0.0000000000000000000000000000000004049 134.0
DYD1_k127_669723_0 Aminotransferase class I and II K00814 - 2.6.1.2 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001528 337.0
DYD1_k127_669723_1 AMP-binding enzyme C-terminal domain K04110 - 6.2.1.25 0.00000000000000000000000000000000000000000000000000000000000000000000000000000004552 277.0
DYD1_k127_669723_2 translation initiation factor activity K06996 - - 0.000000000000000000000000000000000000000000194 163.0
DYD1_k127_669723_3 PFAM aminotransferase, class I and II - - - 0.00008558 47.0
DYD1_k127_6754461_0 Carbamoyltransferase C-terminus K00612 - - 1.64e-262 820.0
DYD1_k127_6754461_1 - - - - 0.000000006527 60.0
DYD1_k127_6756159_0 spermidine synthase activity - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005821 422.0
DYD1_k127_6756159_1 Produces ATP from ADP in the presence of a proton gradient across the membrane. The gamma chain is believed to be important in regulating ATPase activity and the flow of protons through the CF(0) complex K02115 GO:0005575,GO:0005618,GO:0005623,GO:0005886,GO:0008150,GO:0016020,GO:0030312,GO:0040007,GO:0044464,GO:0071944 - 0.0000000000000000000000000000003863 124.0
DYD1_k127_6768046_0 DNA repair enzyme that has both DNA N-glycosylase activity and AP-lyase activity. The DNA N-glycosylase activity releases various damaged pyrimidines from DNA by cleaving the N- glycosidic bond, leaving an AP (apurinic apyrimidinic) site. The AP-lyase activity cleaves the phosphodiester bond 3' to the AP site by a beta-elimination, leaving a 3'-terminal unsaturated sugar and a product with a terminal 5'-phosphate K10773 - 4.2.99.18 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000002385 281.0
DYD1_k127_6768046_1 Methyltransferase domain K00588 - 2.1.1.104 0.0000000000000000000000000000000000000000000000000000000000003839 218.0
DYD1_k127_6768046_2 PFAM Glycerophosphoryl diester phosphodiesterase K01126 - 3.1.4.46 0.000000000000000000000000000000000000000000000000000000001551 211.0
DYD1_k127_6768046_3 amine dehydrogenase activity K14647,K21449 - - 0.0000000000000000000000000000000000000000000000000000001642 213.0
DYD1_k127_6768046_4 Evidence 4 Homologs of previously reported genes of K03975 - - 0.000000000000000000000000000000000000000000000104 177.0
DYD1_k127_6768046_5 Catalyzes, although with low efficiency, the sulfur transfer reaction from thiosulfate to cyanide - - - 0.000000001159 59.0
DYD1_k127_6770157_0 Component of the pyruvate dehydrogenase (PDH) complex, that catalyzes the overall conversion of pyruvate to acetyl-CoA and CO(2) K00163 - 1.2.4.1 0.0 1390.0
DYD1_k127_6770157_1 Bifunctional enzyme that catalyzes the epimerization of the S- and R-forms of NAD(P)HX and the dehydration of the S-form of NAD(P)HX at the expense of ADP, which is converted to AMP. This allows the repair of both epimers of NAD(P)HX, a damaged form of NAD(P)H that is a result of enzymatic or heat-dependent hydration K17758,K17759 - 4.2.1.136,5.1.99.6 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006822 376.0
DYD1_k127_6770157_2 Domain of unknown function (DUF4331) - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003041 344.0
DYD1_k127_6770157_3 glycolate biosynthetic process K01091,K06019 - 3.1.3.18,3.6.1.1 0.00000000000000000000000000000000001536 143.0
DYD1_k127_6770157_4 Hydrolase, P-loop family K06925 - - 0.000000000000000000000000000008777 123.0
DYD1_k127_6770157_5 heat shock protein binding - - - 0.0000000000000000000000000000314 131.0
DYD1_k127_6770157_6 The pyruvate dehydrogenase complex catalyzes the overall conversion of pyruvate to acetyl-CoA and CO(2) K00627 - 2.3.1.12 0.00000000000000000000001878 106.0
DYD1_k127_6770157_7 Peptidase M56 - - - 0.000000000000000000244 100.0
DYD1_k127_6770157_8 histone H2A K63-linked ubiquitination - - - 0.000000000012 76.0
DYD1_k127_6773635_0 Amidohydrolase family - - - 2.388e-231 756.0
DYD1_k127_6773635_1 Domain of unknown function (DUF4112) - - - 0.0000000000000000000000000001015 124.0
DYD1_k127_6776171_0 aminotransferase class V - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003353 340.0
DYD1_k127_6776171_1 Catalyzes the transfer of a dimethylallyl group onto the adenine at position 37 in tRNAs that read codons beginning with uridine, leading to the formation of N6-(dimethylallyl)adenosine (i(6)A) K00791 GO:0003674,GO:0003824,GO:0006139,GO:0006396,GO:0006399,GO:0006400,GO:0006725,GO:0006807,GO:0008033,GO:0008150,GO:0008152,GO:0009451,GO:0009987,GO:0010467,GO:0016070,GO:0016740,GO:0016765,GO:0034470,GO:0034641,GO:0034660,GO:0043170,GO:0043412,GO:0044237,GO:0044238,GO:0046483,GO:0052381,GO:0071704,GO:0090304,GO:0140098,GO:0140101,GO:1901360 2.5.1.75 0.000000000000000000000000000000000000000000000000000000000001387 220.0
DYD1_k127_6776171_2 heat shock protein binding K05516,K05801 - - 0.000000000000000000000000000000000000007236 159.0
DYD1_k127_6776171_3 phosphorelay signal transduction system - - - 0.000000000000000000000000000008574 128.0
DYD1_k127_6776171_4 RNA chaperone that binds small regulatory RNA (sRNAs) and mRNAs to facilitate mRNA translational regulation in response to envelope stress, environmental stress and changes in metabolite concentrations. Also binds with high specificity to tRNAs K03666 - - 0.00000000000000004614 84.0
DYD1_k127_6781687_0 Protein tyrosine kinase - - - 0.000000000000000000000000000000000000000000000000000000000000000002304 247.0
DYD1_k127_6781687_1 PIN domain - - - 0.000000000000000000000000000000000001526 143.0
DYD1_k127_6781687_2 cAMP biosynthetic process K08884,K12132 - 2.7.11.1 0.000000000000000000000000000006577 123.0
DYD1_k127_6781687_3 SpoVT / AbrB like domain - - - 0.0000000000002127 72.0
DYD1_k127_6784314_0 ASPIC and UnbV - - - 0.00000000000000000000000000000000000000001652 174.0
DYD1_k127_6806345_0 efflux transmembrane transporter activity K02004 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006906 386.0
DYD1_k127_6808443_0 spermidine synthase activity - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003313 352.0
DYD1_k127_6815467_0 Belongs to the class-II pyridine nucleotide-disulfide oxidoreductase family K00384,K03671 GO:0000166,GO:0001666,GO:0003674,GO:0003824,GO:0004791,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006950,GO:0008150,GO:0008152,GO:0009628,GO:0009636,GO:0009987,GO:0015035,GO:0015036,GO:0016209,GO:0016491,GO:0016651,GO:0016667,GO:0016668,GO:0019725,GO:0036094,GO:0036293,GO:0040007,GO:0042221,GO:0042592,GO:0043167,GO:0043168,GO:0044424,GO:0044444,GO:0044464,GO:0045454,GO:0048037,GO:0050660,GO:0050661,GO:0050662,GO:0050789,GO:0050794,GO:0050896,GO:0051716,GO:0055114,GO:0065007,GO:0065008,GO:0070402,GO:0070482,GO:0070887,GO:0097159,GO:0097237,GO:0098754,GO:0098869,GO:1901265,GO:1901363,GO:1990748 1.8.1.9 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006358 367.0
DYD1_k127_6815467_1 Conserved hypothetical protein (DUF2461) - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000002206 265.0
DYD1_k127_6815467_2 Amidohydrolase family - - - 0.000000000000000000000000000000000000000000000000000000000000000000000004621 244.0
DYD1_k127_6815467_3 transporter antisigma-factor antagonist STAS K04749 - - 0.0000000000000000000000001262 109.0
DYD1_k127_6836914_0 oxidoreductase activity - - - 0.0000000002052 73.0
DYD1_k127_6836914_1 tetratricopeptide repeat - - - 0.0000006492 61.0
DYD1_k127_6839560_0 One of the primary rRNA binding proteins. Required for association of the 30S and 50S subunits to form the 70S ribosome, for tRNA binding and peptide bond formation. It has been suggested to have peptidyltransferase activity K02886 - - 0.00000000000000000000000000000000000000000000000002724 181.0
DYD1_k127_6839560_1 One of the primary rRNA binding proteins, this protein initially binds near the 5'-end of the 23S rRNA. It is important during the early stages of 50S assembly. It makes multiple contacts with different domains of the 23S rRNA in the assembled 50S subunit and ribosome K02926 - - 0.000000000000000000000000000000000000000000000000224 188.0
DYD1_k127_6839560_2 One of the primary rRNA binding proteins, it binds directly near the 3'-end of the 23S rRNA, where it nucleates assembly of the 50S subunit K02906 - - 0.000000000000000000000000000000000000000000004497 166.0
DYD1_k127_6839560_3 One of the early assembly proteins it binds 23S rRNA. One of the proteins that surrounds the polypeptide exit tunnel on the outside of the ribosome. Forms the main docking site for trigger factor binding to the ribosome K02892 GO:0000027,GO:0003674,GO:0003676,GO:0003723,GO:0003735,GO:0005198,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0006412,GO:0006518,GO:0006807,GO:0006996,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0015934,GO:0016043,GO:0019538,GO:0022607,GO:0022613,GO:0022618,GO:0022625,GO:0022626,GO:0032991,GO:0034622,GO:0034641,GO:0034645,GO:0042254,GO:0042255,GO:0042273,GO:0043043,GO:0043170,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043603,GO:0043604,GO:0043933,GO:0044085,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:0065003,GO:0070925,GO:0071704,GO:0071826,GO:0071840,GO:0097159,GO:1901363,GO:1901564,GO:1901566,GO:1901576,GO:1990904 - 0.0000000000000000000000004275 108.0
DYD1_k127_6849424_0 Belongs to the peptidase S8 family K17734 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008165 449.0
DYD1_k127_6849424_1 methyltransferase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009737 313.0
DYD1_k127_6866247_0 Aspartyl-tRNA synthetase with relaxed tRNA specificity since it is able to aspartylate not only its cognate tRNA(Asp) but also tRNA(Asn). Reaction proceeds in two steps L-aspartate is first activated by ATP to form Asp-AMP and then transferred to the acceptor end of tRNA(Asp Asn) K01876 - 6.1.1.12 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004202 603.0
DYD1_k127_6866247_1 ATPase family associated with various cellular activities (AAA) K03924 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002163 355.0
DYD1_k127_6872058_0 COGs COG1022 Long-chain acyl-CoA synthetase (AMP-forming) K01897 - 6.2.1.3 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001753 541.0
DYD1_k127_6872058_1 Type ii and iii secretion system protein K02453 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008223 351.0
DYD1_k127_6872058_2 Tetratricopeptide repeat - - - 0.0000000000000000000000000000003471 132.0
DYD1_k127_6872058_3 oxidoreductase activity, acting on CH-OH group of donors K00059 - 1.1.1.100 0.0000000001115 62.0
DYD1_k127_6872058_4 signal transduction protein containing a membrane domain, an EAL and a GGDEF domain - - - 0.0005505 50.0
DYD1_k127_688252_0 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001329 391.0
DYD1_k127_6896602_0 pfam abc K02065 - - 0.000000000000000000000000000000000000000000000000000000000000000002086 232.0
DYD1_k127_6896602_1 ABC-type transport system involved in resistance to organic solvents, periplasmic component K02067 - - 0.00000000000000000000000000000000000000000000000000000000003625 222.0
DYD1_k127_690419_0 RNA ligase activity K14415 GO:0005575,GO:0005576,GO:0005618,GO:0005623,GO:0030312,GO:0044464,GO:0071944 6.5.1.3 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001542 588.0
DYD1_k127_690419_1 Alternative locus ID - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002375 578.0
DYD1_k127_690419_2 Alpha/beta hydrolase family - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000002982 278.0
DYD1_k127_690419_3 Belongs to the arginase family - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000004382 278.0
DYD1_k127_690419_4 4-amino-4-deoxy-L-arabinose transferase activity - - - 0.00000000000000000000000000000000000000000000000001983 186.0
DYD1_k127_6904234_0 Belongs to the aldehyde dehydrogenase family - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002321 549.0
DYD1_k127_6904234_1 Bacterial extracellular solute-binding protein K11069 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001504 364.0
DYD1_k127_6904234_2 Binding-protein-dependent transport system inner membrane component K11070 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000002669 289.0
DYD1_k127_6904234_3 - - - - 0.00000000000000000000000000000000000000000000000000000001379 203.0
DYD1_k127_6904234_4 Cupin domain - - - 0.0000000000000004873 79.0
DYD1_k127_6907871_0 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000004623 318.0
DYD1_k127_6907871_1 cheY-homologous receiver domain K07658 - - 0.00000000000000000000000000001655 125.0
DYD1_k127_6907871_2 PFAM EAL domain protein - - - 0.0000000000000000000005552 106.0
DYD1_k127_6925476_0 efflux transmembrane transporter activity K02004 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003303 501.0
DYD1_k127_6925476_1 LysM domain K08086 - - 0.0000000000000000000000000177 127.0
DYD1_k127_6925476_2 Serine threonine protein kinase - - - 0.000000000000000000001127 108.0
DYD1_k127_6926934_0 Sulfatase - - - 0.000000000000000000000000000000000000000000000000000000000002111 234.0
DYD1_k127_6926934_1 GDP-mannose 4,6 dehydratase K01784 - 5.1.3.2 0.00000000000006689 79.0
DYD1_k127_6938071_0 PFAM Prolyl oligopeptidase family - - - 4.77e-198 639.0
DYD1_k127_6938769_0 damaged site, the DNA wraps around one UvrB monomer. DNA wrap is dependent on ATP binding by UvrB and probably causes local melting of the DNA helix, facilitating insertion of UvrB beta-hairpin between the DNA strands. Then UvrB probes one DNA strand for the presence of a lesion. If a lesion is found the UvrA subunits dissociate and the UvrB-DNA preincision complex is formed. This complex is subsequently bound by UvrC and the second UvrB is released. If no lesion is found, the DNA wraps around the other UvrB subunit that will check the other stand for damage K03702 - - 9.708e-261 821.0
DYD1_k127_6938769_1 Pseudouridine synthase K06179,K06180 - 5.4.99.23,5.4.99.24 0.0000000000000000000000000000000000000000000000000009099 192.0
DYD1_k127_6938854_0 UDP-4-amino-4-deoxy-L-arabinose aminotransferase K13010 - 2.6.1.102 0.00000000000000000000000000000000000000002089 160.0
DYD1_k127_6938854_1 TIGRFAM type IV-A pilus assembly ATPase PilB K02652 - - 0.000000000000000000002362 101.0
DYD1_k127_6943697_0 pyrroloquinoline quinone binding - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002977 377.0
DYD1_k127_6943697_1 Converts alpha-N-acetylneuranimic acid (Neu5Ac) to the beta-anomer, accelerating the equilibrium between the alpha- and beta-anomers. Probably facilitates sialidase-negative bacteria to compete sucessfully for limited amounts of extracellular Neu5Ac, which is likely taken up in the beta-anomer. In addition, the rapid removal of sialic acid from solution might be advantageous to the bacterium to damp down host responses - - - 0.00000000000000000000000000000000000000000000000000007276 196.0
DYD1_k127_6948704_0 ADP-glyceromanno-heptose 6-epimerase activity K01710,K08678 - 4.1.1.35,4.2.1.46 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007733 479.0
DYD1_k127_6948704_1 Belongs to the ClpA ClpB family K03695,K03696 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001034 436.0
DYD1_k127_6948704_2 Alpha beta superfamily - - - 0.000000000000007018 85.0
DYD1_k127_6948704_3 FeS assembly protein SufD K09014,K09015 - - 0.0001919 44.0
DYD1_k127_6969054_0 Ornithine cyclodeaminase/mu-crystallin family K01750 - 4.3.1.12 0.00000000000000000000000000000000000000000000006302 176.0
DYD1_k127_6969054_1 TonB-dependent receptor K16089 - - 0.000009769 58.0
DYD1_k127_6987748_0 ATPases associated with a variety of cellular activities K01990,K09689,K09691,K09693 - 3.6.3.38,3.6.3.40 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001225 493.0
DYD1_k127_6987748_1 ABC-2 type transporter K09690 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000006369 295.0
DYD1_k127_6987748_2 Methyltransferase small domain K15460 - 2.1.1.223 0.000000000000000000000000000000000002035 147.0
DYD1_k127_6987748_3 Peptide chain release factor 2 directs the termination of translation in response to the peptide chain termination codons UGA and UAA K02836 - - 0.000000000001103 68.0
DYD1_k127_701329_0 Peptidase family M23 K01406 - 3.4.24.40 0.0000000000000000000000000000000000000000000000151 193.0
DYD1_k127_704883_0 Alpha beta hydrolase - - - 0.0000000000000000000000000000000000000000000000000000000000001814 224.0
DYD1_k127_704883_1 Polyketide cyclase / dehydrase and lipid transport - - - 0.000000000000000000000000000000000000009548 147.0
DYD1_k127_765470_0 gluconolactonase activity K01053 - 3.1.1.17 9.969e-204 648.0
DYD1_k127_765470_1 amino acids such as valine, to avoid such errors it has two additional distinct tRNA(Ile)-dependent editing activities. One activity is designated as 'pretransfer' editing and involves the hydrolysis of activated Val-AMP. The other activity is designated 'posttransfer' editing and involves deacylation of mischarged Val-tRNA(Ile) K01870 - 6.1.1.5 0.00000000000000000000000001499 111.0
DYD1_k127_7802_0 Sigma-54 interaction domain - - - 0.0000000000000000000000000000000000000000000000000000000000000004079 230.0
DYD1_k127_7802_1 Catalyzes the reversible adenylation of nicotinate mononucleotide (NaMN) to nicotinic acid adenine dinucleotide (NaAD) K00969 - 2.7.7.18 0.0000000000000000000000000000000000001917 149.0
DYD1_k127_7802_2 Functions as a ribosomal silencing factor. Interacts with ribosomal protein L14 (rplN), blocking formation of intersubunit bridge B8. Prevents association of the 30S and 50S ribosomal subunits and the formation of functional ribosomes, thus repressing translation K09710 - - 0.000000000000000000000001124 107.0
DYD1_k127_7802_3 Specifically methylates the pseudouridine at position 1915 (m3Psi1915) in 23S rRNA K00783 - 2.1.1.177 0.00000000000000000000006215 103.0
DYD1_k127_7802_4 Involved in the tonB-independent uptake of proteins K08884,K12132 - 2.7.11.1 0.00000000000000000000008047 100.0
DYD1_k127_783373_0 Tetratricopeptide repeat - - - 0.000000000000000000000000000000000000000000000000000002059 195.0
DYD1_k127_783373_1 Enoyl-(Acyl carrier protein) reductase K03793 - 1.5.1.33 0.00000000000000000000000000000000000000000000000000001425 198.0
DYD1_k127_783373_2 Glycine cleavage T-protein C-terminal barrel domain K00605,K06980 - 2.1.2.10 0.0000000000000000000000000000000000000000000002496 180.0
DYD1_k127_783373_3 Belongs to the SUA5 family K07566 - 2.7.7.87 0.00000000000000000000000003917 116.0
DYD1_k127_784367_0 Bacterial protein of unknown function (DUF885) - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005776 610.0
DYD1_k127_784367_1 TAP-like protein K01055 - 3.1.1.24 0.000003319 56.0
DYD1_k127_789959_0 aldo-keto reductase (NADP) activity - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001628 334.0
DYD1_k127_795401_0 Oligoendopeptidase f - - - 2.72e-204 646.0
DYD1_k127_795401_1 chitinase K01183 - 3.2.1.14 0.00000000000000000000000000000009753 139.0
DYD1_k127_795401_2 Involved in the biosynthesis of the osmoprotectant glycine betaine. Catalyzes the oxidation of choline to betaine aldehyde and betaine aldehyde to glycine betaine at the same rate K00108 - 1.1.99.1 0.000000000000000000001503 94.0
DYD1_k127_801334_0 AAA domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001764 429.0
DYD1_k127_801334_1 ATPase domain predominantly from Archaea K06921 - - 0.00000000000000000000000000001333 129.0
DYD1_k127_801334_2 Peptidoglycan-binding domain 1 protein - - - 0.0000000000000000000000000003986 123.0
DYD1_k127_801334_3 nucleotidyltransferase activity K07075 - - 0.0000000008182 64.0
DYD1_k127_820947_0 DNA polymerase K02337 GO:0003674,GO:0003824,GO:0003887,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006139,GO:0006259,GO:0006260,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009360,GO:0009987,GO:0016740,GO:0016772,GO:0016779,GO:0018130,GO:0019438,GO:0032991,GO:0034061,GO:0034641,GO:0034645,GO:0034654,GO:0042575,GO:0043170,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044271,GO:0044424,GO:0044444,GO:0044464,GO:0044776,GO:0046483,GO:0061695,GO:0071704,GO:0071897,GO:0090304,GO:0140097,GO:1901360,GO:1901362,GO:1901576,GO:1902494,GO:1990234 2.7.7.7 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001185 462.0
DYD1_k127_820947_1 Belongs to the D-alanine--D-alanine ligase family K01921 - 6.3.2.4 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004824 375.0
DYD1_k127_820947_2 Component of the acetyl coenzyme A carboxylase (ACC) complex. First, biotin carboxylase catalyzes the carboxylation of biotin on its carrier protein (BCCP) and then the CO(2) group is transferred by the carboxyltransferase to acetyl-CoA to form malonyl-CoA K01962 - 2.1.3.15,6.4.1.2 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002373 372.0
DYD1_k127_837909_0 Cytochrome C assembly protein K02195 - - 0.000000000000000000000000000000000000000000000000000006793 194.0
DYD1_k127_837909_1 domain, Protein - - - 0.0000000000000000000000000000000000000000129 175.0
DYD1_k127_847749_0 COG0457 FOG TPR repeat - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005695 370.0
DYD1_k127_847749_1 serine threonine protein kinase K08884,K12132 - 2.7.11.1 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000005372 289.0
DYD1_k127_847749_2 NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient K00331 - 1.6.5.3 0.00000000000000000000000000000000000000000000000000000000000000000001752 237.0
DYD1_k127_847749_3 Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family - - - 0.00000000000000000000000001092 123.0
DYD1_k127_847749_4 NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient K00330 - 1.6.5.3 0.00000000000000000000003057 103.0
DYD1_k127_852909_0 ABC transporter K06147,K11085 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001326 418.0
DYD1_k127_852909_1 ABC transporter K06147,K06148 - - 0.0000000000000000000000000000000000000000001443 168.0
DYD1_k127_852909_2 Transcriptional regulatory protein, C terminal - - - 0.000003416 57.0
DYD1_k127_853142_0 tRNA (guanine(37)-N(1))-methyltransferase activity - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001283 380.0
DYD1_k127_853142_1 Involved in the tonB-independent uptake of proteins - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000006374 279.0
DYD1_k127_853142_2 Catalyzes the ADP transfer from ATP to D-glycero-beta-D- manno-heptose 1-phosphate, yielding ADP-D-glycero-beta-D-manno- heptose K03272 - 2.7.1.167,2.7.7.70 0.00000000000000000000000000000000000000000000000000000000000000000000000000141 263.0
DYD1_k127_853250_0 MutS domain I K03555 GO:0003674,GO:0003676,GO:0003677,GO:0003684,GO:0003690,GO:0003824,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0006139,GO:0006259,GO:0006281,GO:0006298,GO:0006725,GO:0006807,GO:0006950,GO:0006974,GO:0008094,GO:0008150,GO:0008152,GO:0009987,GO:0016462,GO:0016787,GO:0016817,GO:0016818,GO:0016887,GO:0017111,GO:0030983,GO:0032300,GO:0032991,GO:0033554,GO:0034641,GO:0042623,GO:0043170,GO:0044237,GO:0044238,GO:0044260,GO:0044424,GO:0044464,GO:0046483,GO:0050896,GO:0051716,GO:0071704,GO:0090304,GO:0097159,GO:1901360,GO:1901363,GO:1990391 - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000002094 288.0
DYD1_k127_853250_1 Glycosyl hydrolase family 3 N terminal domain K01207 - 3.2.1.52 0.00000000000000000000000000000000000000000000000000000000001269 225.0
DYD1_k127_853250_2 Catalyzes the ATP-dependent transfer of a sulfur to tRNA to produce 4-thiouridine in position 8 of tRNAs, which functions as a near-UV photosensor. Also catalyzes the transfer of sulfur to the sulfur carrier protein ThiS, forming ThiS-thiocarboxylate. This is a step in the synthesis of thiazole, in the thiamine biosynthesis pathway. The sulfur is donated as persulfide by IscS - - - 0.0000000000000000003608 94.0
DYD1_k127_853441_0 Psort location Cytoplasmic, score - - - 0.0000000000000000000000000000000000000000000000000000000007253 216.0
DYD1_k127_853441_1 peptidyl-tyrosine sulfation K00525,K01768 - 1.17.4.1,4.6.1.1 0.0000000000000000000000000000000000000000003506 167.0
DYD1_k127_853441_2 Belongs to the bacterial ribosomal protein bL34 family K02914 - - 0.00000000004981 67.0
DYD1_k127_853441_3 Glycerol-3-phosphate dehydrogenase K00057 - 1.1.1.94 0.00000004088 55.0
DYD1_k127_856479_0 Zinc carboxypeptidase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000037 588.0
DYD1_k127_856479_1 COG0330 Membrane protease subunits, stomatin prohibitin homologs - - - 0.000000000000000000000000000000000000000000000000000000000007724 215.0
DYD1_k127_856479_2 Zinc phosphodiesterase, which displays some tRNA 3'- processing endonuclease activity. Probably involved in tRNA maturation, by removing a 3'-trailer from precursor tRNA K00784 GO:0003674,GO:0003824,GO:0004518,GO:0004519,GO:0004521,GO:0004540,GO:0006139,GO:0006396,GO:0006399,GO:0006725,GO:0006807,GO:0008033,GO:0008150,GO:0008152,GO:0009987,GO:0010467,GO:0016070,GO:0016787,GO:0016788,GO:0016891,GO:0016893,GO:0031123,GO:0034414,GO:0034470,GO:0034641,GO:0034660,GO:0042779,GO:0042780,GO:0042781,GO:0043170,GO:0043628,GO:0044237,GO:0044238,GO:0046483,GO:0071704,GO:0090304,GO:0090305,GO:0090501,GO:0090502,GO:0140098,GO:1901360,GO:1905267 3.1.26.11 0.0000000000000000000000000000000000000000000000000000000004226 214.0
DYD1_k127_86143_0 Belongs to the 'phage' integrase family - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002027 404.0
DYD1_k127_86143_1 Bacterial extracellular solute-binding protein K02027,K10236 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001601 349.0
DYD1_k127_86143_2 Transposase - - - 0.0000000000000000000000000000001925 137.0
DYD1_k127_86143_3 Rhodanese Homology Domain - - - 0.000000000004866 66.0
DYD1_k127_865028_0 Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family K15726 - - 9.193e-250 801.0
DYD1_k127_865028_1 Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family K15727 - - 0.000000000000000000000000000000000000000000000000000000000000001662 234.0
DYD1_k127_869190_0 K COG5665 CCR4-NOT transcriptional regulation complex, NOT5 subunit - - - 0.00000000000000000000000000000000108 141.0
DYD1_k127_869190_1 Involved in the tonB-independent uptake of proteins K08884,K12132 - 2.7.11.1 0.0000000000000000000000001731 109.0
DYD1_k127_869190_2 Catalyzes the 2'-O-methylation of the ribose of cytidine 1402 (C1402) in 16S rRNA K07056 - 2.1.1.198 0.000000000000009541 80.0
DYD1_k127_869190_3 non supervised orthologous group - - - 0.0006531 44.0
DYD1_k127_883038_0 IgA Peptidase M64 - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003669 527.0
DYD1_k127_883038_1 proteolysis - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003173 335.0
DYD1_k127_883038_2 pfkB family carbohydrate kinase K00847,K00852 - 2.7.1.15,2.7.1.4 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000056 279.0
DYD1_k127_886404_0 2-oxoglutarate dehydrogenase N-terminus K00164 - 1.2.4.2 0.0 1034.0
DYD1_k127_886404_1 peptidyl-tyrosine sulfation - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001203 499.0
DYD1_k127_886404_2 Dihydrolipoamide acetyltransferase component of pyruvate dehydrogenase complex K00627,K00658,K09699 - 2.3.1.12,2.3.1.168,2.3.1.61 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000005831 286.0
DYD1_k127_911634_0 Protein kinase domain K12132 - 2.7.11.1 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008441 508.0
DYD1_k127_942475_0 Acetyl-coenzyme A transporter 1 K08218 - - 6.079e-196 618.0
DYD1_k127_942475_1 PQQ-like domain K05889 - 1.1.2.6 0.000000000000000000001028 106.0
DYD1_k127_942475_2 cAMP biosynthetic process K08884,K12132 - 2.7.11.1 0.0000000000000000001627 102.0
DYD1_k127_959531_0 Flavin containing amine oxidoreductase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003185 424.0
DYD1_k127_959531_1 PFAM Cupin 2, conserved barrel domain protein - - - 0.00001391 55.0
DYD1_k127_959531_2 Protein of unknown function (DUF971) - - - 0.00003453 46.0
DYD1_k127_960122_0 Alcohol dehydrogenase GroES-like domain K13979 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001895 512.0
DYD1_k127_960122_1 - - - - 0.00000000000000000000000000000000000000000000000001696 194.0
DYD1_k127_960122_2 alpha beta - - - 0.0000000000000000000000000007915 126.0
DYD1_k127_960122_3 efflux transmembrane transporter activity - - - 0.00000000001793 67.0
DYD1_k127_969454_0 Acyl-CoA synthetase (AMP-forming) AMP-acid ligase II K01897 - 6.2.1.3 0.0000000000000000000000000000000000000000000000000000000000000000000000000005289 274.0
DYD1_k127_969454_1 Part of the tripartite ATP-independent periplasmic (TRAP) transport system - - - 0.000000000000000003827 94.0
DYD1_k127_976040_0 ATP-dependent DNA helicase RecQ K03654 - 3.6.4.12 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004162 346.0
DYD1_k127_98285_0 NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain K00335 - 1.6.5.3 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001185 343.0
DYD1_k127_98285_1 Phosphatidylethanolamine-binding protein K06910 - - 0.000000000000000000000000000000000000000000000000000000001734 204.0
DYD1_k127_98285_2 thiamine-phosphate kinase activity K00946,K07123 GO:0000166,GO:0000287,GO:0003674,GO:0003824,GO:0005488,GO:0005524,GO:0006725,GO:0006732,GO:0006766,GO:0006767,GO:0006772,GO:0006790,GO:0006793,GO:0006796,GO:0006807,GO:0008144,GO:0008150,GO:0008152,GO:0009030,GO:0009058,GO:0009108,GO:0009110,GO:0009228,GO:0009229,GO:0009987,GO:0016301,GO:0016310,GO:0016740,GO:0016772,GO:0016776,GO:0017076,GO:0017144,GO:0018130,GO:0019438,GO:0019637,GO:0030554,GO:0032553,GO:0032555,GO:0032559,GO:0034641,GO:0035639,GO:0036094,GO:0040007,GO:0042357,GO:0042364,GO:0042723,GO:0042724,GO:0043167,GO:0043168,GO:0043169,GO:0044237,GO:0044249,GO:0044271,GO:0044272,GO:0044281,GO:0044283,GO:0046483,GO:0046872,GO:0051186,GO:0051188,GO:0071704,GO:0072527,GO:0072528,GO:0090407,GO:0097159,GO:0097367,GO:1901265,GO:1901360,GO:1901362,GO:1901363,GO:1901564,GO:1901566,GO:1901576 2.7.4.16 0.00000000000000000000000000000000000000000000000000000512 203.0
DYD1_k127_98285_3 Belongs to the short-chain dehydrogenases reductases (SDR) family K00059 - 1.1.1.100 0.000000000000000000000000000000000000000000006119 172.0
DYD1_k127_98285_4 PFAM ATP-binding region, ATPase domain protein K07636,K07652 - 2.7.13.3 0.00000000000000000000000000000000000006159 151.0
DYD1_k127_98285_5 PFAM alkyl hydroperoxide reductase Thiol specific antioxidant Mal allergen K02199 - - 0.000000000000000000000000000002334 126.0
DYD1_k127_98285_6 cheY-homologous receiver domain K07668 - - 0.00000000000000000000000000002054 121.0
DYD1_k127_98285_7 Histidine kinase-like ATPase domain K04757 - 2.7.11.1 0.0000000000000000000002997 101.0
DYD1_k127_98285_8 phosphorelay signal transduction system - - - 0.0000000006372 69.0
DYD1_k127_986337_0 AAA domain, putative AbiEii toxin, Type IV TA system K01990 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000002065 298.0
DYD1_k127_986337_1 PFAM ABC-2 type transporter K01992 - - 0.00000000000000000000000000000000000000000000000000009761 200.0
DYD1_k127_986337_2 long-chain fatty acid transporting porin activity K06076 - - 0.000000000000000004216 87.0
DYD1_k127_996720_0 Insulinase (Peptidase family M16) - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005308 483.0
DYD1_k127_996720_1 Insulinase (Peptidase family M16) - - - 0.000000000000000000000008444 102.0
DYD1_k127_996720_2 Prokaryotic N-terminal methylation motif - - - 0.00003689 53.0
DYD1_k127_996720_3 pilus assembly protein PilW - - - 0.0006042 51.0