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Overview

ID MAG00892
Name DYD1_bin.83
Sample SMP0025
Taxonomy
Kingdom Bacteria
Phylum Bacteroidota
Class Bacteroidia
Order Cytophagales
Family Cyclobacteriaceae
Genus ELB16-189
Species
Assembly information
Completeness (%) 91.25
Contamination (%) 0.09
GC content (%) 41.0
N50 (bp) 18,452
Genome size (bp) 3,484,461

Location

Module

Module ID Module name Total genes Total steps Contain genes Contain steps Percentage of genes Percentage of steps

Genes3070

Gene name Description KEGG GOs EC E-value Score Sequence
DYD1_k127_1089953_0 Arginyl-tRNA synthetase K01887 GO:0003674,GO:0003824,GO:0004812,GO:0004814,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006082,GO:0006139,GO:0006399,GO:0006412,GO:0006418,GO:0006420,GO:0006518,GO:0006520,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0016070,GO:0016874,GO:0016875,GO:0019538,GO:0019752,GO:0034641,GO:0034645,GO:0034660,GO:0043038,GO:0043039,GO:0043043,GO:0043170,GO:0043436,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044281,GO:0044424,GO:0044464,GO:0046483,GO:0071704,GO:0090304,GO:0140098,GO:0140101,GO:1901360,GO:1901564,GO:1901566,GO:1901576 6.1.1.19 3e-263 823.0
DYD1_k127_1089953_1 PFAM Pyridoxal-dependent decarboxylase, C-terminal sheet domain K01585 - 4.1.1.19 1.752e-240 749.0
DYD1_k127_1089953_2 - - - - 1.572e-206 650.0
DYD1_k127_1089953_3 Deoxyhypusine synthase K00809 - 2.5.1.46 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001868 566.0
DYD1_k127_1089953_4 Belongs to the arginase family K01476,K01480 - 3.5.3.1,3.5.3.11 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002541 425.0
DYD1_k127_1089953_5 PFAM YceI-like domain - - - 0.00000000000000000000000000000000000001837 150.0
DYD1_k127_1089953_6 Pfam YceI-like domain - - - 0.000000000000000000000000000000000217 139.0
DYD1_k127_1089953_7 Belongs to the UPF0312 family - - - 0.0000000000000000000000000000000003951 138.0
DYD1_k127_1089953_8 - - - - 0.0000000000000008947 85.0
DYD1_k127_1089953_9 Belongs to the glutathione peroxidase family K00432 - 1.11.1.9 0.000003223 51.0
DYD1_k127_1164621_0 TonB dependent receptor - - - 0.0 1078.0
DYD1_k127_1164621_1 Haloacid Dehalogenase Superfamily Class (subfamily) IIA K02566 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000185 402.0
DYD1_k127_1164621_2 Starch-binding associating with outer membrane K21572 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002122 355.0
DYD1_k127_1164621_3 Protein of unknown function, DUF547 - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001721 323.0
DYD1_k127_1164621_4 Sigma-70 region 2 - - - 0.0000000000000000000000000000000000000000000000000000000007404 205.0
DYD1_k127_1164621_5 - - - - 0.00000000000000000000000002099 116.0
DYD1_k127_1164621_6 Domain of unknown function (DUF4251) - - - 0.0006466 48.0
DYD1_k127_1176309_0 Protein of unknown function (DUF2723) - - - 0.0 1274.0
DYD1_k127_1176309_1 ATP-dependent DNA helicase RecQ K03654 - 3.6.4.12 0.0 1133.0
DYD1_k127_1176309_10 Belongs to the class IV-like SAM-binding methyltransferase superfamily. RNA methyltransferase TrmH family K03218,K03437 - 2.1.1.185 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009706 310.0
DYD1_k127_1176309_11 - - - - 0.00000000000000000000000000000000000000000000000000000000000003404 228.0
DYD1_k127_1176309_12 - - - - 0.0000000000000000000000000000000000000000000000000000000000003474 218.0
DYD1_k127_1176309_13 TIGRFAM Gliding motility-associated lipoprotein, GldH - GO:0006022,GO:0006026,GO:0006030,GO:0006032,GO:0006040,GO:0006807,GO:0006928,GO:0008150,GO:0008152,GO:0009056,GO:0009057,GO:0009987,GO:0017144,GO:0040011,GO:0042737,GO:0043170,GO:0044237,GO:0044248,GO:0046348,GO:0048870,GO:0051179,GO:0051674,GO:0071704,GO:0071976,GO:1901071,GO:1901072,GO:1901135,GO:1901136,GO:1901564,GO:1901565,GO:1901575 - 0.00000000000000000000000000000000000437 142.0
DYD1_k127_1176309_14 - - - - 0.000000002705 58.0
DYD1_k127_1176309_2 PFAM PSP1 C-terminal conserved region - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001722 557.0
DYD1_k127_1176309_3 Belongs to the GARS family K01945 - 6.3.4.13 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008033 548.0
DYD1_k127_1176309_4 Part of the Sec protein translocase complex. Interacts with the SecYEG preprotein conducting channel. SecDF uses the proton motive force (PMF) to complete protein translocation after the ATP-dependent function of SecA K03072,K12257 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003282 528.0
DYD1_k127_1176309_5 Tetratricopeptide repeat - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002404 505.0
DYD1_k127_1176309_6 Belongs to the SIS family. GutQ KpsF subfamily K06041 - 5.3.1.13 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001127 470.0
DYD1_k127_1176309_7 TIGRFAM mannose-1-phosphate guanylyltransferase mannose-6-phosphate isomerase K00971 - 2.7.7.13 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009378 452.0
DYD1_k127_1176309_8 COGs COG0399 pyridoxal phosphate-dependent enzyme apparently involved in regulation of cell wall biogenesis - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005667 395.0
DYD1_k127_1176309_9 Methionine biosynthesis protein MetW - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000344 315.0
DYD1_k127_1177216_0 lysine biosynthetic process via aminoadipic acid - - - 1.566e-279 877.0
DYD1_k127_1177216_1 aldehyde K00131 - 1.2.1.9 1.115e-251 785.0
DYD1_k127_1177216_10 homoserine dehydrogenase K00003 - 1.1.1.3 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002452 326.0
DYD1_k127_1177216_11 Catalyzes a reversible aldol reaction between acetaldehyde and D-glyceraldehyde 3-phosphate to generate 2-deoxy- D-ribose 5-phosphate K01619 GO:0003674,GO:0003824,GO:0004139,GO:0005975,GO:0006139,GO:0006725,GO:0006753,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0009056,GO:0009058,GO:0009117,GO:0009166,GO:0009262,GO:0009264,GO:0009987,GO:0016052,GO:0016829,GO:0016830,GO:0016832,GO:0018130,GO:0019438,GO:0019439,GO:0019637,GO:0034404,GO:0034641,GO:0034654,GO:0034655,GO:0044237,GO:0044238,GO:0044248,GO:0044249,GO:0044270,GO:0044271,GO:0044281,GO:0044283,GO:0046434,GO:0046483,GO:0046700,GO:0055086,GO:0071704,GO:1901135,GO:1901136,GO:1901292,GO:1901360,GO:1901361,GO:1901362,GO:1901575,GO:1901576 4.1.2.4 0.000000000000000000000000000000000000000000000000000000000000000000000000000000011 275.0
DYD1_k127_1177216_12 tetratricopeptide repeat - - - 0.0000000000000000000000000000000000000000000000000000000000004789 231.0
DYD1_k127_1177216_13 - - - - 0.00000000000000000000000000000000000000000000000000000000003656 211.0
DYD1_k127_1177216_14 Sigma-70, region 4 K03088 - - 0.00000000000000000000000000000000000006933 148.0
DYD1_k127_1177216_15 DinB superfamily - - - 0.000000000000000000000009039 106.0
DYD1_k127_1177216_16 Acylphosphatase K01512 - 3.6.1.7 0.0000000000000000000003735 100.0
DYD1_k127_1177216_2 NQR complex catalyzes the reduction of ubiquinone-1 to ubiquinol by two successive reactions, coupled with the transport of Na( ) ions from the cytoplasm to the periplasm. The first step is catalyzed by NqrF, which accepts electrons from NADH and reduces ubiquinone-1 to ubisemiquinone by a one-electron transfer pathway K00351 - 1.6.5.8 5.633e-247 766.0
DYD1_k127_1177216_20 Domain of unknown function (DUF4974) - - - 0.0000000007601 66.0
DYD1_k127_1177216_3 dihydrolipoamide dehydrogenase K00382 - 1.8.1.4 3.697e-243 756.0
DYD1_k127_1177216_4 PFAM Cys Met metabolism PLP-dependent enzyme K01740 - 2.5.1.49 5.121e-240 746.0
DYD1_k127_1177216_5 Belongs to the arginase family K01479 - 3.5.3.8 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003181 565.0
DYD1_k127_1177216_6 lactoylglutathione lyase activity - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001552 462.0
DYD1_k127_1177216_7 TIGRFAM 3-oxoacyl-(acyl-carrier-protein) reductase K00059 - 1.1.1.100 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001655 411.0
DYD1_k127_1177216_8 Transfers an acetyl group from acetyl-CoA to L- homoserine, forming acetyl-L-homoserine K00641 - 2.3.1.31 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007936 388.0
DYD1_k127_1177216_9 - - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002271 338.0
DYD1_k127_1178203_0 Belongs to the CarA family K01956 - 6.3.5.5 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000216 586.0
DYD1_k127_1178203_1 DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates K03040 GO:0003674,GO:0003824,GO:0003899,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006139,GO:0006351,GO:0006354,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0016070,GO:0016740,GO:0016772,GO:0016779,GO:0018130,GO:0019438,GO:0032774,GO:0034062,GO:0034641,GO:0034645,GO:0034654,GO:0043170,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044271,GO:0044424,GO:0044464,GO:0046483,GO:0071704,GO:0090304,GO:0097659,GO:0097747,GO:0140098,GO:1901360,GO:1901362,GO:1901576 2.7.7.6 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004549 564.0
DYD1_k127_1178203_2 One of the primary rRNA binding proteins, it binds directly to 16S rRNA where it nucleates assembly of the body of the 30S subunit K02986 GO:0003674,GO:0003676,GO:0003723,GO:0003735,GO:0005198,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005840,GO:0006417,GO:0006450,GO:0008150,GO:0009889,GO:0009891,GO:0009893,GO:0010468,GO:0010556,GO:0010557,GO:0010604,GO:0010608,GO:0010628,GO:0015935,GO:0019222,GO:0019843,GO:0031323,GO:0031325,GO:0031326,GO:0031328,GO:0032268,GO:0032270,GO:0032991,GO:0034248,GO:0034250,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044446,GO:0044464,GO:0045727,GO:0045903,GO:0048518,GO:0048522,GO:0050789,GO:0050794,GO:0051171,GO:0051173,GO:0051246,GO:0051247,GO:0060255,GO:0065007,GO:0065008,GO:0080090,GO:0097159,GO:1901363,GO:1990904,GO:2000112 - 0.0000000000000000000000000000000000000000000000000000000000000000000000001837 249.0
DYD1_k127_1178203_3 Ribosomal protein L17 K02879 GO:0003674,GO:0003735,GO:0005198,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0015934,GO:0022625,GO:0022626,GO:0032991,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:1990904 - 0.000000000000000000000000000000000000000000000000000000001433 205.0
DYD1_k127_1178203_4 Catalyzes the reversible conversion of 2- phosphoglycerate into phosphoenolpyruvate. It is essential for the degradation of carbohydrates via glycolysis K01689 - 4.2.1.11 0.0000000000000002403 78.0
DYD1_k127_1178402_0 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase - - - 2.035e-272 889.0
DYD1_k127_1191691_0 Copper type II ascorbate-dependent monooxygenase, C-terminal domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004513 462.0
DYD1_k127_1191691_1 mandelate racemase muconate lactonizing - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007654 438.0
DYD1_k127_1191691_2 Domain of unknown function (DUF1611_N) Rossmann-like domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000018 434.0
DYD1_k127_1191691_3 Specifically methylates position 2 of adenine 2503 in 23S rRNA and position 2 of adenine 37 in tRNAs K06941 GO:0000154,GO:0001510,GO:0003674,GO:0003824,GO:0006139,GO:0006364,GO:0006396,GO:0006399,GO:0006400,GO:0006725,GO:0006807,GO:0008033,GO:0008150,GO:0008152,GO:0008168,GO:0008173,GO:0008175,GO:0008649,GO:0008757,GO:0009451,GO:0009987,GO:0010467,GO:0016070,GO:0016072,GO:0016740,GO:0016741,GO:0022613,GO:0030488,GO:0031167,GO:0032259,GO:0034470,GO:0034641,GO:0034660,GO:0042254,GO:0043170,GO:0043412,GO:0043414,GO:0044085,GO:0044237,GO:0044238,GO:0044260,GO:0046483,GO:0070475,GO:0071704,GO:0071840,GO:0090304,GO:0140098,GO:0140101,GO:0140102,GO:1901360 2.1.1.192 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008503 415.0
DYD1_k127_1191691_4 abc transporter (atp-binding protein) K02013 - 3.6.3.34 0.0000000000000000000000000000001463 128.0
DYD1_k127_1191691_5 Redoxin - - - 0.0000000000000000000000000001503 122.0
DYD1_k127_1197105_0 Belongs to the agmatine deiminase family K10536 - 3.5.3.12 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005579 569.0
DYD1_k127_1197105_1 amidohydrolase K12941 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001165 568.0
DYD1_k127_1197105_2 PFAM Nitrilase cyanide hydratase and apolipoprotein N-acyltransferase K12251 - 3.5.1.53 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001774 523.0
DYD1_k127_1197105_3 Protein of unknown function (DUF3078) - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001635 325.0
DYD1_k127_1197105_4 Peptide methionine sulfoxide reductase K07304 - 1.8.4.11 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000002315 292.0
DYD1_k127_1197105_5 CBS domain - - - 0.000000000000000000000000000000000000001731 152.0
DYD1_k127_1197105_6 FAD linked oxidases, C-terminal domain - - - 0.0000000000000000000000000000000004375 133.0
DYD1_k127_1199876_0 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001335 452.0
DYD1_k127_1199876_1 PFAM HhH-GPD superfamily base excision DNA repair protein K10773 - 4.2.99.18 0.0000000000000000000000000000000000000000000000000000000000000000000000001046 251.0
DYD1_k127_1199876_2 PFAM OsmC family protein - - - 0.0000000000000000000000000000000000000000000000000000000000000001311 224.0
DYD1_k127_1199876_3 - - - - 0.0000000000000000000000000000000000003242 149.0
DYD1_k127_1199876_4 Protein of unknown function (DUF4242) - - - 0.000000000000000000000000000000000001381 139.0
DYD1_k127_1199876_5 - - - - 0.0000000000000000000000000005806 122.0
DYD1_k127_120288_0 The pyruvate dehydrogenase complex catalyzes the overall conversion of pyruvate to acetyl-CoA and CO(2) K00161 - 1.2.4.1 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000868 459.0
DYD1_k127_120288_1 Tetratricopeptide repeat - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000001213 271.0
DYD1_k127_120288_2 Catalyzes the formation of 6,7-dimethyl-8- ribityllumazine by condensation of 5-amino-6-(D- ribitylamino)uracil with 3,4-dihydroxy-2-butanone 4-phosphate. This is the penultimate step in the biosynthesis of riboflavin K00794 GO:0000906,GO:0003674,GO:0003824,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006766,GO:0006767,GO:0006771,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009110,GO:0009231,GO:0009987,GO:0016740,GO:0016765,GO:0017144,GO:0018130,GO:0034641,GO:0042364,GO:0042726,GO:0042727,GO:0044237,GO:0044249,GO:0044271,GO:0044281,GO:0044283,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0071704,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576 2.5.1.78 0.0000000000000000000000000000000000000000000000000000007959 196.0
DYD1_k127_120288_3 Peptidase family S58 K01266 - 3.4.11.19 0.000004207 49.0
DYD1_k127_1231583_0 C-terminal domain of CHU protein family - - - 6.987e-240 803.0
DYD1_k127_1231583_1 Involved in targeting and insertion of nascent membrane proteins into the cytoplasmic membrane. Binds to the hydrophobic signal sequence of the ribosome-nascent chain (RNC) as it emerges from the ribosomes. The SRP-RNC complex is then targeted to the cytoplasmic membrane where it interacts with the SRP receptor FtsY K03106 - 3.6.5.4 4.436e-224 700.0
DYD1_k127_1231583_10 Phosphate starvation-inducible protein PhoH K06217 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004146 443.0
DYD1_k127_1231583_11 Molybdenum cofactor synthesis domain protein K03750 - 2.10.1.1 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007521 425.0
DYD1_k127_1231583_12 Required for the formation of a threonylcarbamoyl group on adenosine at position 37 (t(6)A37) in tRNAs that read codons beginning with adenine K07566 - 2.7.7.87 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001144 392.0
DYD1_k127_1231583_13 Belongs to the glycerate kinase type-1 family K00865 - 2.7.1.165 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001266 334.0
DYD1_k127_1231583_14 Belongs to the enoyl-CoA hydratase isomerase family K13766 - 4.2.1.18 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000109 322.0
DYD1_k127_1231583_15 domain protein K01179,K19360,K21449 - 3.2.1.4 0.000000000000000000000000000000000000000000000000000000000000000000008263 249.0
DYD1_k127_1231583_16 Molybdenum cofactor biosynthesis protein K03637 - 4.6.1.17 0.0000000000000000000000000000000000000000000000000000004661 196.0
DYD1_k127_1231583_17 DsrE/DsrF-like family - - - 0.000000000000000000000000000000000000000000000001627 179.0
DYD1_k127_1231583_18 pfam nudix - - - 0.0000000000000000000000000000000000000000000001428 173.0
DYD1_k127_1231583_19 Molybdopterin converting factor, large subunit K03635 - 2.8.1.12 0.00000000000000000000000000000000000000000000845 166.0
DYD1_k127_1231583_2 ATP-dependent DNA helicase RecQ K03654 - 3.6.4.12 1.128e-218 695.0
DYD1_k127_1231583_20 S-adenosyl-l-methionine hydroxide adenosyltransferase - - - 0.000000000000000000000000000000000000000172 152.0
DYD1_k127_1231583_21 Transfers a GMP moiety from GTP to Mo-molybdopterin (Mo- MPT) cofactor (Moco or molybdenum cofactor) to form Mo- molybdopterin guanine dinucleotide (Mo-MGD) cofactor K03752 - 2.7.7.77 0.000000000000000000000000000000000000127 148.0
DYD1_k127_1231583_22 Putative ATP-dependant zinc protease - - - 0.0000000000000000000000000000000000001908 145.0
DYD1_k127_1231583_23 Involved in sulfur transfer in the conversion of molybdopterin precursor Z to molybdopterin K03636 - - 0.0000000000000000002914 90.0
DYD1_k127_1231583_24 - - - - 0.00000000000000000154 91.0
DYD1_k127_1231583_3 Catalyzes the phosphorylation of D-fructose 6-phosphate to fructose 1,6-bisphosphate by ATP, the first committing step of glycolysis K21071 - 2.7.1.11,2.7.1.90 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001911 572.0
DYD1_k127_1231583_4 Belongs to the phosphoglycerate kinase family K00927 - 2.7.2.3 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000172 572.0
DYD1_k127_1231583_5 Belongs to the RimK family K05844 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000267 505.0
DYD1_k127_1231583_6 TIGRFAM Bacteroidetes-specific - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004999 490.0
DYD1_k127_1231583_7 TIGRFAM ComEC Rec2-related protein K02238 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006005 471.0
DYD1_k127_1231583_8 Catalyzes the cyclization of GTP to (8S)-3',8-cyclo-7,8- dihydroguanosine 5'-triphosphate K03639 - 4.1.99.22 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000196 447.0
DYD1_k127_1231583_9 PFAM Succinylglutamate desuccinylase Aspartoacylase family K06987 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002805 443.0
DYD1_k127_1232273_0 Penicillin-binding protein, dimerisation domain K05515 - 3.4.16.4 4.33e-294 912.0
DYD1_k127_1232273_1 acetyl-CoA hydrolase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001349 595.0
DYD1_k127_1232273_10 - - - - 0.00000000000000000000000000000000000000000003078 166.0
DYD1_k127_1232273_11 Protein of unknown function (DUF1573) - - - 0.0000000000000000000000000000000005363 135.0
DYD1_k127_1232273_12 PFAM 2Fe-2S iron-sulfur cluster binding domain K04755 - - 0.00000000000000000000000000000006375 127.0
DYD1_k127_1232273_13 Involved in formation and maintenance of cell shape K03570 - - 0.0008996 43.0
DYD1_k127_1232273_2 Belongs to the SEDS family K05837 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006982 557.0
DYD1_k127_1232273_3 Two component regulator propeller - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007309 573.0
DYD1_k127_1232273_4 Signal transduction histidine kinase K07636 - 2.7.13.3 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002905 468.0
DYD1_k127_1232273_5 NADP oxidoreductase coenzyme F420-dependent - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002349 338.0
DYD1_k127_1232273_6 Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000001779 280.0
DYD1_k127_1232273_7 thymidine kinase K00857 GO:0003674,GO:0003824,GO:0004797,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006139,GO:0006213,GO:0006259,GO:0006725,GO:0006753,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009116,GO:0009117,GO:0009120,GO:0009123,GO:0009124,GO:0009157,GO:0009162,GO:0009165,GO:0009987,GO:0016301,GO:0016310,GO:0016740,GO:0016772,GO:0018130,GO:0019136,GO:0019205,GO:0019206,GO:0019438,GO:0019637,GO:0034641,GO:0034654,GO:0043170,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044271,GO:0044281,GO:0044424,GO:0044444,GO:0044464,GO:0046104,GO:0046125,GO:0046483,GO:0055086,GO:0071704,GO:0072527,GO:0090304,GO:0090407,GO:1901135,GO:1901293,GO:1901360,GO:1901362,GO:1901564,GO:1901576,GO:1901657 2.7.1.21 0.0000000000000000000000000000000000000000000000000000000000000000000000001094 252.0
DYD1_k127_1232273_8 Involved in DNA repair and RecF pathway recombination K03584 - - 0.00000000000000000000000000000000000000000000000000000000000001047 222.0
DYD1_k127_1232273_9 - - - - 0.000000000000000000000000000000000000000000000000000000000001611 222.0
DYD1_k127_1258545_0 Belongs to the argininosuccinate synthase family. Type 1 subfamily K01940 - 6.3.4.5 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002654 610.0
DYD1_k127_1258545_1 Belongs to the ATCase OTCase family K09065,K13043 GO:0000050,GO:0003674,GO:0003824,GO:0004585,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006082,GO:0006520,GO:0006525,GO:0006526,GO:0006591,GO:0006807,GO:0008150,GO:0008152,GO:0008652,GO:0009058,GO:0009064,GO:0009084,GO:0009987,GO:0016053,GO:0016740,GO:0016741,GO:0016743,GO:0019627,GO:0019752,GO:0034641,GO:0042450,GO:0043436,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0044283,GO:0044424,GO:0044464,GO:0046394,GO:0071704,GO:0071941,GO:1901564,GO:1901566,GO:1901576,GO:1901605,GO:1901607 2.1.3.11,2.1.3.9 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000162 469.0
DYD1_k127_1258545_2 Catalyzes the NADPH-dependent reduction of N-acetyl-5- glutamyl phosphate to yield N-acetyl-L-glutamate 5-semialdehyde K00145 - 1.2.1.38 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008885 424.0
DYD1_k127_1258545_3 Catalyzes the reduction of 1-pyrroline-5-carboxylate (PCA) to L-proline K00286 - 1.5.1.2 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000011 331.0
DYD1_k127_1258545_4 Acetyltransferase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004547 314.0
DYD1_k127_1258545_5 FtsX-like permease family - - - 0.00000000000000000000000000000000000000000000000000000000000001717 220.0
DYD1_k127_1258545_6 Belongs to the acetylglutamate kinase family. ArgB subfamily K00930 GO:0003674,GO:0003824,GO:0003991,GO:0005488,GO:0006082,GO:0006520,GO:0006525,GO:0006526,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0008652,GO:0009058,GO:0009064,GO:0009084,GO:0009987,GO:0016053,GO:0016301,GO:0016310,GO:0016597,GO:0016740,GO:0016772,GO:0016774,GO:0019752,GO:0031406,GO:0034618,GO:0036094,GO:0043167,GO:0043168,GO:0043169,GO:0043177,GO:0043436,GO:0044237,GO:0044238,GO:0044249,GO:0044281,GO:0044283,GO:0046394,GO:0071704,GO:1901564,GO:1901566,GO:1901576,GO:1901605,GO:1901607 2.7.2.8 0.0000000000000000000000000000000000000000000000000000000007395 204.0
DYD1_k127_1292236_0 The UvrABC repair system catalyzes the recognition and processing of DNA lesions. UvrC both incises the 5' and 3' sides of the lesion. The N-terminal half is responsible for the 3' incision and the C-terminal half is responsible for the 5' incision K03703 GO:0005575,GO:0005622,GO:0005623,GO:0006950,GO:0006974,GO:0008150,GO:0009380,GO:0009987,GO:0032991,GO:0033554,GO:0044424,GO:0044464,GO:0050896,GO:0051716,GO:1902494,GO:1905347,GO:1905348,GO:1990391 - 1.387e-235 742.0
DYD1_k127_1292236_1 Penicillin binding protein transpeptidase K05366 - 2.4.1.129,3.4.16.4 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009592 374.0
DYD1_k127_1292236_2 TIGRFAM gliding motility associated protien GldN - - - 0.000000000000000000000000000000000000000000000000002892 187.0
DYD1_k127_13671_0 PFAM metallophosphoesterase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004474 520.0
DYD1_k127_13671_1 - - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001164 315.0
DYD1_k127_13671_2 CotH kinase protein K06330 - - 0.00000000000000000000000000000000000000000000000000000000000003945 229.0
DYD1_k127_13671_3 Adenylate cyclase - - - 0.00000000000000000000000000000000000000000000000002228 199.0
DYD1_k127_13671_4 Domain of unknown function (DUF4956) - - - 0.000000000000000000000000000000002563 136.0
DYD1_k127_13671_5 COGs COG5616 integral membrane protein - - - 0.00000009817 57.0
DYD1_k127_1374306_0 DNA polymerase III alpha subunit K02337 - 2.7.7.7 1.234e-313 986.0
DYD1_k127_1374306_1 Aminotransferase class I and II - - - 3.258e-215 674.0
DYD1_k127_138331_0 AAA ATPase domain - - - 0.0 1558.0
DYD1_k127_138331_1 MacB-like periplasmic core domain - - - 1.747e-287 908.0
DYD1_k127_138331_2 catalase activity - - - 5.393e-218 698.0
DYD1_k127_138331_3 catalase activity - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001308 386.0
DYD1_k127_138331_4 Fasciclin domain - - - 0.0000000000000000000000000000000000000000000000000000000000002026 216.0
DYD1_k127_138331_5 Domain of unknown function (DUF4386) - - - 0.0000000000000000000000000000000000000000000000002137 184.0
DYD1_k127_138331_6 negative regulation of transcription, DNA-templated - - - 0.0000000000000000000000000000000000000000000001647 169.0
DYD1_k127_138331_7 serine-type peptidase activity - - - 0.0000000000000000002914 90.0
DYD1_k127_141881_0 Required for accurate and efficient protein synthesis under certain stress conditions. May act as a fidelity factor of the translation reaction, by catalyzing a one-codon backward translocation of tRNAs on improperly translocated ribosomes. Back- translocation proceeds from a post-translocation (POST) complex to a pre-translocation (PRE) complex, thus giving elongation factor G a second chance to translocate the tRNAs correctly. Binds to ribosomes in a GTP-dependent manner K03596 - - 8e-323 994.0
DYD1_k127_141881_1 Catalyzes the ATP-dependent phosphorylation of thiamine- monophosphate (TMP) to form thiamine-pyrophosphate (TPP), the active form of vitamin B1 K00946 - 2.7.4.16 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007464 475.0
DYD1_k127_141881_2 Acyl carrier protein phosphodiesterase - - - 0.0000000000000000000000000000000000000000000000000000000000000002627 226.0
DYD1_k127_141881_3 - - - - 0.000000000000000000000000000000000000000000000000002075 184.0
DYD1_k127_141881_4 Glyoxalase bleomycin resistance protein dioxygenase K05606 - 5.1.99.1 0.000000000000000000000001891 103.0
DYD1_k127_141881_6 Tellurite resistance protein TerB - - - 0.00000072 56.0
DYD1_k127_1424317_0 ribonuclease, Rne Rng family K08301 - - 3.916e-246 769.0
DYD1_k127_1424317_1 Molecular chaperone. Has ATPase activity K04079 - - 1.918e-231 721.0
DYD1_k127_1424317_2 Critical role in recombination and DNA repair. Helps process Holliday junction intermediates to mature products by catalyzing branch migration. Has a DNA unwinding activity characteristic of a DNA helicase with a 3'- to 5'- polarity. Unwinds branched duplex DNA (Y-DNA) K03655 - 3.6.4.12 9.066e-231 723.0
DYD1_k127_1424317_3 TIGRFAM gliding motility-associated protein GldE - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005868 521.0
DYD1_k127_1424317_4 A G-specific adenine glycosylase K03575 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000063 389.0
DYD1_k127_1424317_5 TIGRFAM gliding motility-associated lipoprotein GldD - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000002073 254.0
DYD1_k127_1424317_6 Tetratricopeptide repeat - - - 0.000000000000000000000000000000000000000000000000000000000000000005784 234.0
DYD1_k127_1424317_7 Plays an important role in DNA replication, recombination and repair. Binds to ssDNA and to an array of partner proteins to recruit them to their sites of action during DNA metabolism K03111 - - 0.0000000000000000000000000000000000000000000000000000000000000005227 222.0
DYD1_k127_1424317_8 Belongs to the bacterial histone-like protein family K03530 - - 0.00000000000000000000000000000000000000000009485 161.0
DYD1_k127_1424317_9 - - - - 0.000004127 48.0
DYD1_k127_145360_0 Belongs to the thiolase family K00626,K00632 - 2.3.1.16,2.3.1.9 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001559 523.0
DYD1_k127_145360_1 COG2273 Beta-glucanase Beta-glucan synthetase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000001383 284.0
DYD1_k127_145360_2 Integral membrane protein - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000001679 267.0
DYD1_k127_145360_3 Alpha/beta hydrolase family K07020 - - 0.000000000000000000000000000000000000000000000000000000000000001688 225.0
DYD1_k127_1461305_0 Belongs to the class-I aminoacyl-tRNA synthetase family K01869 GO:0003674,GO:0003824,GO:0004812,GO:0004823,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006082,GO:0006139,GO:0006399,GO:0006412,GO:0006418,GO:0006429,GO:0006518,GO:0006520,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0016070,GO:0016874,GO:0016875,GO:0019538,GO:0019752,GO:0034641,GO:0034645,GO:0034660,GO:0043038,GO:0043039,GO:0043043,GO:0043170,GO:0043436,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044281,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0071704,GO:0090304,GO:0140098,GO:0140101,GO:1901360,GO:1901564,GO:1901566,GO:1901576 6.1.1.4 0.0 1315.0
DYD1_k127_1461305_1 DEAD DEAH box helicase K03724 - - 0.0 1159.0
DYD1_k127_1461305_10 Belongs to the glyceraldehyde-3-phosphate dehydrogenase family K00134 - 1.2.1.12 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000553 587.0
DYD1_k127_1461305_11 Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family K00821 - 2.6.1.11,2.6.1.17 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001349 570.0
DYD1_k127_1461305_12 Catalyzes the condensation reaction of fatty acid synthesis by the addition to an acyl acceptor of two carbons from malonyl-ACP. Catalyzes the first condensation reaction which initiates fatty acid synthesis and may therefore play a role in governing the total rate of fatty acid production. Possesses both acetoacetyl-ACP synthase and acetyl transacylase activities. Its substrate specificity determines the biosynthesis of branched- chain and or straight-chain of fatty acids K00648 - 2.3.1.180 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008382 555.0
DYD1_k127_1461305_13 Peptidase, M28 - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004767 442.0
DYD1_k127_1461305_14 Bestrophin, RFP-TM, chloride channel K08994 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001124 338.0
DYD1_k127_1461305_15 Bacterial capsule synthesis protein K07282 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001392 341.0
DYD1_k127_1461305_16 Protease subunit of a proteasome-like degradation complex believed to be a general protein degrading machinery K01419 - 3.4.25.2 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003049 302.0
DYD1_k127_1461305_17 PFAM MerR family regulatory protein K22491 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005226 306.0
DYD1_k127_1461305_18 COGs COG1028 Dehydrogenase with different specificities (related to short-chain alcohol dehydrogenase) - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000009898 295.0
DYD1_k127_1461305_19 Response regulator of the LytR AlgR family - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000001306 293.0
DYD1_k127_1461305_2 glutamine synthetase K01915 - 6.3.1.2 0.0 1094.0
DYD1_k127_1461305_20 Serine aminopeptidase, S33 - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000001023 275.0
DYD1_k127_1461305_21 Calcineurin-like phosphoesterase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000001319 265.0
DYD1_k127_1461305_22 - - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000002803 269.0
DYD1_k127_1461305_23 PFAM histidine kinase internal region - - - 0.00000000000000000000000000000000000000000000000000000000000000000000007004 252.0
DYD1_k127_1461305_24 PFAM Endoribonuclease L-PSP - - - 0.0000000000000000000000000000000000000000000000000000000000000000001973 232.0
DYD1_k127_1461305_25 Putative auto-transporter adhesin, head GIN domain - - - 0.00000000000000000000000000000000000000000000000000000000000000001124 231.0
DYD1_k127_1461305_26 - - - - 0.000000000000000000000000000000000000000000000000000000000001898 215.0
DYD1_k127_1461305_27 Tellurite resistance protein TerB - - - 0.00000000000000000000000000000000000000000000000000001354 191.0
DYD1_k127_1461305_29 Electron transfer DM13 - - - 0.00000000000000000000000000000000000000000006215 171.0
DYD1_k127_1461305_3 Involved in the tonB-independent uptake of proteins - - - 4.236e-305 963.0
DYD1_k127_1461305_30 - - - - 0.0000000000000000000000000000000001297 136.0
DYD1_k127_1461305_31 protein conserved in bacteria - - - 0.0000000000000000000003212 100.0
DYD1_k127_1461305_33 - - - - 0.000000000004048 67.0
DYD1_k127_1461305_4 Amidohydrolase family - - - 1.577e-237 746.0
DYD1_k127_1461305_5 The pyruvate dehydrogenase complex catalyzes the overall conversion of pyruvate to acetyl-CoA and CO(2) K00627 - 2.3.1.12 1.528e-221 698.0
DYD1_k127_1461305_6 TonB-dependent Receptor Plug Domain - - - 1.551e-221 707.0
DYD1_k127_1461305_7 Belongs to the peptidase S41A family K03797 - 3.4.21.102 2.756e-213 675.0
DYD1_k127_1461305_8 epimerase - - - 7.076e-207 653.0
DYD1_k127_1461305_9 phosphate transporter - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005439 616.0
DYD1_k127_1467854_0 Calcineurin-like phosphoesterase - - - 1.116e-210 672.0
DYD1_k127_1467854_1 PFAM Metal-dependent phosphohydrolase, HD - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000124 422.0
DYD1_k127_1467854_2 Transaldolase is important for the balance of metabolites in the pentose-phosphate pathway K00616,K08314 - 2.2.1.2 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008361 378.0
DYD1_k127_1467854_3 PFAM ABC transporter K09812 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001505 355.0
DYD1_k127_1467854_4 Pfam Adenylate and Guanylate cyclase catalytic domain K01768 - 4.6.1.1 0.000000000000000000000000000000000000000000000000000000000000002842 235.0
DYD1_k127_1467854_5 COG1670 Acetyltransferases, including N-acetylases of ribosomal proteins K03817 - - 0.0000000000000000000000000001369 121.0
DYD1_k127_1491091_0 Peptidase family C25 - - - 0.0 1533.0
DYD1_k127_1491091_1 PFAM PspC domain K03973 - - 4.459e-216 695.0
DYD1_k127_1491091_2 PFAM TonB-dependent Receptor Plug - - - 6.807e-211 672.0
DYD1_k127_1491091_3 exonuclease of the beta-lactamase fold involved in RNA processing K07576 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000106 516.0
DYD1_k127_1491091_4 helix_turn_helix, Lux Regulon - - - 0.00000000000000000000000000000000000000000000000000000000000002521 220.0
DYD1_k127_1491091_5 Peptidyl-prolyl cis-trans isomerase K03775 - 5.2.1.8 0.000000000000000000000000000000000000000000000000000000000001288 213.0
DYD1_k127_1491091_6 Transcriptional regulator K10947 - - 0.000000000000000000000000000000000000000000000000043 180.0
DYD1_k127_149139_0 Belongs to the phenylalanyl-tRNA synthetase beta subunit family. Type 1 subfamily K01890 GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006082,GO:0006139,GO:0006399,GO:0006412,GO:0006418,GO:0006432,GO:0006518,GO:0006520,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009328,GO:0009987,GO:0010467,GO:0016070,GO:0019538,GO:0019752,GO:0032991,GO:0034641,GO:0034645,GO:0034660,GO:0043038,GO:0043039,GO:0043043,GO:0043170,GO:0043436,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044281,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0071704,GO:0090304,GO:1901360,GO:1901564,GO:1901566,GO:1901576,GO:1902494 6.1.1.20 1.04e-321 1002.0
DYD1_k127_149139_1 Endoribonuclease that initiates mRNA decay K18682 - - 4.564e-256 797.0
DYD1_k127_149139_10 Binds directly to 16S ribosomal RNA K02968 - - 0.0000000000000000000000006394 106.0
DYD1_k127_149139_2 COG3653 N-acyl-D-aspartate D-glutamate deacylase K06015 - 3.5.1.81 1.419e-199 629.0
DYD1_k127_149139_3 COGs COG1680 Beta-lactamase class C and other penicillin binding protein K01467 - 3.5.2.6 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009563 336.0
DYD1_k127_149139_4 Belongs to the UPF0758 family K03630 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001347 314.0
DYD1_k127_149139_5 PFAM Peptidase M1 membrane alanine aminopeptidase K01256 - 3.4.11.2 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003358 304.0
DYD1_k127_149139_6 Protein of unknown function (DUF1684) K09164 - - 0.000000000000000000000000000000000000000000000000000008482 195.0
DYD1_k127_149139_7 Activator of cell division through the inhibition of FtsZ GTPase activity, therefore promoting FtsZ assembly into bundles of protofilaments necessary for the formation of the division Z ring. It is recruited early at mid-cell but it is not essential for cell division K09888 - - 0.00000000000000000000000000000005919 126.0
DYD1_k127_149139_8 GCN5-related N-acetyl-transferase K06975 - - 0.0000000000000000000000000000003062 124.0
DYD1_k127_149139_9 - - - - 0.00000000000000000000000001377 111.0
DYD1_k127_1494732_0 COGs COG0664 cAMP-binding protein - catabolite gene activator and regulatory subunit of cAMP-dependent protein kinase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003939 427.0
DYD1_k127_1494732_1 PFAM Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004034 419.0
DYD1_k127_1494732_2 Pyridoxamine 5'-phosphate oxidase K07005 - - 0.0000000000000000000000000000000000005923 144.0
DYD1_k127_1494732_3 - - - - 0.00000000000000001499 87.0
DYD1_k127_1494732_4 endonuclease containing a URI domain K07461 - - 0.0000000003799 61.0
DYD1_k127_1507576_0 Serine carboxypeptidase - - - 3.905e-244 761.0
DYD1_k127_1507576_1 PFAM Amino acid K03294,K03758 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001 552.0
DYD1_k127_1507576_2 Protein of unknown function (DUF3641) - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006535 501.0
DYD1_k127_1507576_3 Amidinotransferase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006533 402.0
DYD1_k127_1507576_4 Beta-lactamase enzyme family K17836 - 3.5.2.6 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002906 344.0
DYD1_k127_1507576_5 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD K03768 - 5.2.1.8 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000257 272.0
DYD1_k127_1507576_6 Antioxidant protein with alkyl hydroperoxidase activity. Required for the reduction of the AhpC active site cysteine residues and for the regeneration of the AhpC enzyme activity - - - 0.000000000000000000000000000000000000000000000000000000000005076 208.0
DYD1_k127_1509783_0 M61 glycyl aminopeptidase - - - 3.732e-218 693.0
DYD1_k127_1509783_1 Endoribonuclease L-PSP - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004947 512.0
DYD1_k127_1509783_2 Phosphotransferase enzyme family - - - 0.000000000000000000000000000000000000000000001251 169.0
DYD1_k127_1532476_0 WD40-like Beta Propeller Repeat - - - 1.831e-260 827.0
DYD1_k127_1532476_1 Periplasmic copper-binding protein (NosD) K07218 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005444 431.0
DYD1_k127_1532476_2 ABC-2 family transporter protein K19341 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001897 304.0
DYD1_k127_1532476_3 ATPases associated with a variety of cellular activities K19340 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000003991 267.0
DYD1_k127_1532476_5 Four repeated domains in the Fasciclin I family of proteins, present in many other contexts. - - - 0.000000000000000000000000000000000000000000000005179 177.0
DYD1_k127_1532476_6 Cytochrome c - - - 0.00000000000000000000001812 102.0
DYD1_k127_153368_0 TIGRFAM FeS assembly protein SufB K09014 - - 1.926e-286 882.0
DYD1_k127_153368_1 TIGRFAM FeS assembly ATPase SufC K09013 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001237 425.0
DYD1_k127_153368_2 TIGRFAM FeS assembly protein SufD K09015 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001988 374.0
DYD1_k127_153368_3 helix_turn_helix ASNC type K03718 - - 0.000000000000000000000000000000000000000000000000000000000000008225 218.0
DYD1_k127_1554723_0 Couples transcription and DNA repair by recognizing RNA polymerase (RNAP) stalled at DNA lesions. Mediates ATP-dependent release of RNAP and its truncated transcript from the DNA, and recruitment of nucleotide excision repair machinery to the damaged site K03723 - - 0.0 1513.0
DYD1_k127_1554723_1 TIGRFAM gliding motility-associated lipoprotein GldJ - - - 4.309e-227 707.0
DYD1_k127_1554723_2 Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family K15726 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008385 572.0
DYD1_k127_1554723_3 Barrel-sandwich domain of CusB or HlyD membrane-fusion K15727 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001473 380.0
DYD1_k127_1554723_4 PFAM major facilitator superfamily MFS_1 - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004005 357.0
DYD1_k127_1554723_5 Psort location Cytoplasmic, score 8.96 - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006254 324.0
DYD1_k127_1554723_6 Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family K15726 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000244 312.0
DYD1_k127_1554723_7 TIGRFAM comF family protein K00764 - 2.4.2.14 0.000000000000000000000000000000000000000000000000000000000000000002332 233.0
DYD1_k127_1554723_8 - - - - 0.0000000000000000000000000000000000005997 148.0
DYD1_k127_1554723_9 Antioxidant protein with alkyl hydroperoxidase activity. Required for the reduction of the AhpC active site cysteine residues and for the regeneration of the AhpC enzyme activity - - - 0.0000000000000000000000000000574 117.0
DYD1_k127_1557271_0 Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family K00819 - 2.6.1.13 9.369e-198 623.0
DYD1_k127_1557271_1 Belongs to the peptidase M24B family K01262 - 3.4.11.9 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002274 579.0
DYD1_k127_1557271_2 COG0123 Deacetylases, including yeast histone deacetylase and acetoin utilization protein - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000483 458.0
DYD1_k127_1557271_3 Required for chromosome condensation and partitioning - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000006565 267.0
DYD1_k127_1557271_4 Chaperonin 10 Kd subunit - - - 0.0000000000000000000000000000000000000000000000000000000000183 207.0
DYD1_k127_1557271_5 PFAM Short-chain dehydrogenase reductase SDR - - - 0.0000000000000000000008686 96.0
DYD1_k127_1557271_6 - - - - 0.0000000000001854 73.0
DYD1_k127_1570251_0 cellulose binding - - - 0.0 1239.0
DYD1_k127_1570251_1 FtsX-like permease family - - - 9.404e-270 852.0
DYD1_k127_1570251_10 lycopene cyclase - - - 0.0000000000000000000000000000000001488 134.0
DYD1_k127_1570251_2 two component, sigma54 specific, transcriptional regulator, Fis family - - - 2.977e-239 746.0
DYD1_k127_1570251_3 MacB-like periplasmic core domain - - - 2.411e-231 740.0
DYD1_k127_1570251_4 FtsX-like permease family - - - 1.316e-227 729.0
DYD1_k127_1570251_5 Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family K02005 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004619 593.0
DYD1_k127_1570251_6 ABC transporter K02003 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000651 434.0
DYD1_k127_1570251_7 Histidine kinase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000638 393.0
DYD1_k127_1570251_8 Caspase domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002337 352.0
DYD1_k127_1570251_9 Concanavalin A-like lectin/glucanases superfamily - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000007399 319.0
DYD1_k127_1593033_0 acyl-CoA dehydrogenase - - - 5.031e-204 639.0
DYD1_k127_1593033_1 PFAM Peptidase family M20 M25 M40 K01436 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008069 591.0
DYD1_k127_1593033_12 - - - - 0.0000000001528 64.0
DYD1_k127_1593033_2 PFAM Starch synthase catalytic domain K00703 - 2.4.1.21 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003507 460.0
DYD1_k127_1593033_3 Prenyltransferase that catalyzes the transfer of the geranylgeranyl moiety of geranylgeranyl diphosphate (GGPP) to the C3 hydroxyl of sn-glycerol-1-phosphate (G1P) K07094 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007468 303.0
DYD1_k127_1593033_4 PFAM Peptidase, membrane zinc metallopeptidase K06973 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000009096 298.0
DYD1_k127_1593033_5 PFAM Uncharacterised protein family (UPF0104) K07027 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000003756 289.0
DYD1_k127_1593033_6 Catalyzes the condensation of pantoate with beta-alanine in an ATP-dependent reaction via a pantoyl-adenylate intermediate K01918 GO:0003674,GO:0003824,GO:0004592,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006082,GO:0006520,GO:0006573,GO:0006575,GO:0006732,GO:0006766,GO:0006767,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009081,GO:0009108,GO:0009110,GO:0009987,GO:0015939,GO:0015940,GO:0016053,GO:0016874,GO:0016879,GO:0016881,GO:0019752,GO:0032787,GO:0033317,GO:0034641,GO:0042364,GO:0042398,GO:0043436,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0044283,GO:0044424,GO:0044444,GO:0044464,GO:0046394,GO:0051186,GO:0051188,GO:0071704,GO:0072330,GO:1901564,GO:1901566,GO:1901576,GO:1901605 6.3.2.1 0.0000000000000000000000000000000000000000000000000000000000000000000000000000001527 274.0
DYD1_k127_1593033_7 Catalyzes the ADP transfer from ATP to D-glycero-beta-D- manno-heptose 1-phosphate, yielding ADP-D-glycero-beta-D-manno- heptose K03272 - 2.7.1.167,2.7.7.70 0.000000000000000000000000000000000000000000000000000000000007458 210.0
DYD1_k127_1593033_8 Catalyzes the pyruvoyl-dependent decarboxylation of aspartate to produce beta-alanine K01579 - 4.1.1.11 0.0000000000000000000000000000000000000000000000000000004093 194.0
DYD1_k127_1593033_9 Domain of unknown function (DUF4270) - - - 0.000000000001303 80.0
DYD1_k127_1617899_0 CarboxypepD_reg-like domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004536 559.0
DYD1_k127_1617899_1 CarboxypepD_reg-like domain - - - 0.00000000000000000000000000000000000000000000000000000000000002479 232.0
DYD1_k127_1617899_2 H( )-stimulated, divalent metal cation uptake system K03322 - - 0.000000000000000000000000000000000000000000000004187 177.0
DYD1_k127_1623350_0 Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain K07303 - 1.3.99.16 3.142e-290 908.0
DYD1_k127_1623350_1 4Fe-4S dicluster domain - - - 5.114e-209 662.0
DYD1_k127_1623350_10 2Fe-2S -binding domain K07302 - 1.3.99.16 0.000000000000000000000000000000000000000000000000000000000000000001372 229.0
DYD1_k127_1623350_11 - - - - 0.0000000000000000000000000000000000000000000000000000000000002096 220.0
DYD1_k127_1623350_12 protein conserved in bacteria K09931 - - 0.000000000000000000000000000000000000000000000000000000000001931 214.0
DYD1_k127_1623350_13 protein kinase activity - - - 0.00000000000000000000000000000000000000000000000000000004129 210.0
DYD1_k127_1623350_14 - - - - 0.0000000000000000000000000000000000000000000000001605 185.0
DYD1_k127_1623350_15 Rhodanese Homology Domain - - - 0.00000000000000000000000000000000000000000004372 165.0
DYD1_k127_1623350_16 MobA-like NTP transferase domain K07141,K19190 - 1.1.1.328,2.7.7.76 0.0000000000000000000000000000000000000003467 157.0
DYD1_k127_1623350_17 Cytochrome C oxidase, cbb3-type, subunit III K00405 - - 0.0000000000000000000000000000004281 126.0
DYD1_k127_1623350_2 glycosyl transferase family 2 - - - 1.953e-208 657.0
DYD1_k127_1623350_3 Pyridine nucleotide-disulphide oxidoreductase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004383 608.0
DYD1_k127_1623350_4 Beta-lactamase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005873 609.0
DYD1_k127_1623350_5 Xanthine and CO dehydrogenases maturation factor, XdhC CoxF family K07402 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006174 445.0
DYD1_k127_1623350_6 - - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005786 384.0
DYD1_k127_1623350_7 Glycosyl transferase, family 2 - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007216 362.0
DYD1_k127_1623350_8 PFAM Glycosyl transferase family 2 - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001101 338.0
DYD1_k127_1623350_9 Protein of unknown function, DUF547 - - - 0.000000000000000000000000000000000000000000000000000000000000000000000235 245.0
DYD1_k127_1682915_0 Catalyzes the 2-thiolation of uridine at the wobble position (U34) of tRNA, leading to the formation of s(2)U34 K00566 - 2.8.1.13 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002788 594.0
DYD1_k127_1682915_1 CoA-transferase family III - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007172 433.0
DYD1_k127_1682915_2 Redoxin - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000376 418.0
DYD1_k127_1682915_3 Specifically methylates the N4 position of cytidine in position 1402 (C1402) of 16S rRNA K03438 GO:0000154,GO:0001510,GO:0003674,GO:0003824,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006139,GO:0006364,GO:0006396,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0008168,GO:0008170,GO:0008173,GO:0008649,GO:0008757,GO:0009451,GO:0009987,GO:0010467,GO:0016070,GO:0016072,GO:0016434,GO:0016740,GO:0016741,GO:0022613,GO:0031167,GO:0032259,GO:0034470,GO:0034641,GO:0034660,GO:0042254,GO:0043170,GO:0043412,GO:0043414,GO:0044085,GO:0044237,GO:0044238,GO:0044260,GO:0044424,GO:0044464,GO:0046483,GO:0070475,GO:0071424,GO:0071704,GO:0071840,GO:0090304,GO:0140098,GO:0140102,GO:1901360 2.1.1.199 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000048 395.0
DYD1_k127_1682915_4 Belongs to the MraZ family K03925 GO:0000976,GO:0001067,GO:0003674,GO:0003676,GO:0003677,GO:0003690,GO:0003700,GO:0005488,GO:0006355,GO:0008150,GO:0009889,GO:0009890,GO:0009892,GO:0010468,GO:0010556,GO:0010558,GO:0010605,GO:0010629,GO:0019219,GO:0019222,GO:0031323,GO:0031324,GO:0031326,GO:0031327,GO:0031333,GO:0043254,GO:0043565,GO:0044087,GO:0044212,GO:0045892,GO:0045934,GO:0048519,GO:0048523,GO:0050789,GO:0050794,GO:0051128,GO:0051129,GO:0051171,GO:0051172,GO:0051252,GO:0051253,GO:0060255,GO:0065007,GO:0080090,GO:0097159,GO:0140110,GO:1901363,GO:1902679,GO:1903506,GO:1903507,GO:1990837,GO:2000112,GO:2000113,GO:2000142,GO:2000143,GO:2001141 - 0.00000000000000000000000000000000000000000000000000000000000000000000005223 243.0
DYD1_k127_1682915_5 Protein of unknown function (DUF502) - - - 0.000000000000000000000000000000000000000000000000007253 186.0
DYD1_k127_1686483_0 aconitate hydratase K01681 - 4.2.1.3 0.0 1322.0
DYD1_k127_1686483_1 Alpha-amylase domain K05343 - 3.2.1.1,5.4.99.16 0.0 1236.0
DYD1_k127_1686483_10 TIGRFAM GTP cyclohydrolase I K01495 - 3.5.4.16 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002565 351.0
DYD1_k127_1686483_11 TIGRFAM Bacteroidetes-specific - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000001836 286.0
DYD1_k127_1686483_12 Iron-storage protein K02217 - 1.16.3.2 0.000000000000000000000000000000000000000000000000000000000000000000000000000006251 264.0
DYD1_k127_1686483_13 PFAM Tetratricopeptide repeat - - - 0.0000000000000000000000000000000000000000000000000000000000000000000003532 250.0
DYD1_k127_1686483_14 pfam nudix - - - 0.00000000000000000000000000000000000000000000000001261 188.0
DYD1_k127_1686483_15 Repeat domain in Vibrio, Colwellia, Bradyrhizobium and Shewanella - - - 0.000000000000000000000003958 107.0
DYD1_k127_1686483_2 Catalyzes the formation of the alpha-1,6-glucosidic linkages in glycogen by scission of a 1,4-alpha-linked oligosaccharide from growing alpha-1,4-glucan chains and the subsequent attachment of the oligosaccharide to the alpha-1,6 position K00700 - 2.4.1.18 4.101e-301 935.0
DYD1_k127_1686483_3 Belongs to the glycosyl hydrolase 57 family - - - 1.025e-281 886.0
DYD1_k127_1686483_4 Phosphoglucose isomerase K01810 GO:0003674,GO:0003824,GO:0004347,GO:0005575,GO:0005576,GO:0005622,GO:0005623,GO:0005737,GO:0005739,GO:0005829,GO:0005886,GO:0005975,GO:0005996,GO:0006006,GO:0006007,GO:0006081,GO:0006082,GO:0006090,GO:0006091,GO:0006094,GO:0006096,GO:0006098,GO:0006139,GO:0006163,GO:0006164,GO:0006165,GO:0006725,GO:0006732,GO:0006733,GO:0006734,GO:0006735,GO:0006739,GO:0006753,GO:0006754,GO:0006757,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0009056,GO:0009058,GO:0009108,GO:0009117,GO:0009123,GO:0009124,GO:0009126,GO:0009127,GO:0009132,GO:0009135,GO:0009141,GO:0009142,GO:0009144,GO:0009145,GO:0009150,GO:0009152,GO:0009156,GO:0009161,GO:0009165,GO:0009166,GO:0009167,GO:0009168,GO:0009179,GO:0009185,GO:0009199,GO:0009201,GO:0009205,GO:0009206,GO:0009259,GO:0009260,GO:0009435,GO:0009987,GO:0016020,GO:0016051,GO:0016052,GO:0016053,GO:0016310,GO:0016853,GO:0016860,GO:0016861,GO:0017144,GO:0018130,GO:0019318,GO:0019319,GO:0019320,GO:0019359,GO:0019362,GO:0019363,GO:0019438,GO:0019439,GO:0019637,GO:0019674,GO:0019682,GO:0019693,GO:0019752,GO:0031012,GO:0032787,GO:0034404,GO:0034641,GO:0034654,GO:0034655,GO:0042866,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0043436,GO:0044237,GO:0044238,GO:0044248,GO:0044249,GO:0044270,GO:0044271,GO:0044281,GO:0044282,GO:0044283,GO:0044421,GO:0044424,GO:0044444,GO:0044464,GO:0046031,GO:0046034,GO:0046364,GO:0046365,GO:0046390,GO:0046394,GO:0046434,GO:0046483,GO:0046496,GO:0046700,GO:0046939,GO:0051156,GO:0051186,GO:0051188,GO:0055086,GO:0055114,GO:0061615,GO:0061620,GO:0061621,GO:0061718,GO:0062039,GO:0062040,GO:0071704,GO:0071944,GO:0072330,GO:0072521,GO:0072522,GO:0072524,GO:0072525,GO:0090407,GO:1901135,GO:1901137,GO:1901292,GO:1901293,GO:1901360,GO:1901361,GO:1901362,GO:1901564,GO:1901566,GO:1901575,GO:1901576 5.3.1.9 1.26e-256 801.0
DYD1_k127_1686483_5 Maltosyltransferase that uses maltose 1-phosphate (M1P) as the sugar donor to elongate linear or branched alpha-(1- 4)- glucans. Is involved in a branched alpha-glucan biosynthetic pathway from trehalose, together with TreS, Mak and GlgB K16147 - 2.4.99.16 9.9e-232 734.0
DYD1_k127_1686483_6 Alpha amylase, catalytic domain - - - 1.763e-231 730.0
DYD1_k127_1686483_7 Catalyzes the phosphorylation of D-fructose 6-phosphate to fructose 1,6-bisphosphate by ATP, the first committing step of glycolysis K00850 - 2.7.1.11 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002624 466.0
DYD1_k127_1686483_8 ROK family K00845 - 2.7.1.2 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009904 433.0
DYD1_k127_1686483_9 GMC oxidoreductase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002232 421.0
DYD1_k127_171094_0 MacB-like periplasmic core domain - - - 5.309e-221 710.0
DYD1_k127_171094_1 PFAM aminotransferase class V - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006106 419.0
DYD1_k127_171094_2 Protein of unknown function (DUF2911) - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005769 321.0
DYD1_k127_171094_3 3-oxo-5-alpha-steroid 4-dehydrogenase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000004338 301.0
DYD1_k127_171094_4 Membrane - - - 0.000000000000000000000000000000000000000000000000000000001263 203.0
DYD1_k127_171094_5 Domain of unknown function DUF302 - - - 0.000000000000000000000000000000000000000000000000000001555 194.0
DYD1_k127_171094_6 domain, Protein - - - 0.00000000000000000000000000000000000000000003961 186.0
DYD1_k127_171094_7 SPTR CHU large protein - - - 0.0000000000000000000000000000000000002136 164.0
DYD1_k127_171094_8 Acetylornithine deacetylase K01438,K01439 - 3.5.1.16,3.5.1.18 0.00000000000000119 88.0
DYD1_k127_1776782_0 Increases the formation of ribosomal termination complexes and stimulates activities of RF-1 and RF-2. It binds guanine nucleotides and has strong preference for UGA stop codons. It may interact directly with the ribosome. The stimulation of RF- 1 and RF-2 is significantly reduced by GTP and GDP, but not by GMP K02837 - - 5.893e-243 760.0
DYD1_k127_1776782_1 Pseudouridine synthase K06177,K06180 - 5.4.99.23,5.4.99.28,5.4.99.29 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000001725 286.0
DYD1_k127_1776782_2 Has lipid A 3-O-deacylase activity. Hydrolyzes the ester bond at the 3 position of lipid A, a bioactive component of lipopolysaccharide (LPS), thereby releasing the primary fatty acyl moiety - - - 0.000000000000000000000000000000000000000000000000007045 185.0
DYD1_k127_1776782_3 TM2 domain - - - 0.00000000000000000000000007932 111.0
DYD1_k127_1776782_4 - - - - 0.000000000000000000000582 102.0
DYD1_k127_1776782_5 Tetratricopeptide repeat - - - 0.000000000000000000791 89.0
DYD1_k127_1776782_6 TIGRFAM filamentous haemagglutinin family outer membrane protein - - - 0.000000000001006 80.0
DYD1_k127_1776782_7 Phage tail tube, TTP, lambda-like - - - 0.000000003816 68.0
DYD1_k127_1781278_0 COG1670 acetyltransferases, including N-acetylases of ribosomal proteins - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000001396 260.0
DYD1_k127_1781278_1 Adenylate and Guanylate cyclase catalytic domain K01768 - 4.6.1.1 0.000000000000000000000000000000000000000000000000000000000000001875 230.0
DYD1_k127_1813134_0 TonB dependent receptor - - - 0.0 1208.0
DYD1_k127_1813134_1 COGs COG1228 Imidazolonepropionase and related amidohydrolase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001459 541.0
DYD1_k127_1813134_10 Belongs to the LOG family K06966 - 3.2.2.10 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008248 368.0
DYD1_k127_1813134_11 PFAM NAD dependent epimerase dehydratase family K07071 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000194 321.0
DYD1_k127_1813134_12 Sodium bile acid symporter family K03453 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000002868 283.0
DYD1_k127_1813134_13 Domain of unknown function (DUF1287) K09974 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000008338 273.0
DYD1_k127_1813134_14 Calcineurin-like phosphoesterase K07313 - 3.1.3.16 0.000000000000000000000000000000000000000000000000000000000000000000000003128 251.0
DYD1_k127_1813134_15 PFAM Membrane protein of K08972 - - 0.00000000000000000000000000000000002467 138.0
DYD1_k127_1813134_16 - - - - 0.0000000000001035 80.0
DYD1_k127_1813134_17 - - - - 0.00000002671 64.0
DYD1_k127_1813134_2 TIGRFAM exonuclease, DNA polymerase III, epsilon subunit family K02342 - 2.7.7.7 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003261 537.0
DYD1_k127_1813134_3 Tetratricopeptide repeat - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003495 539.0
DYD1_k127_1813134_4 PFAM ATPase family associated with various cellular activities (AAA) K03924 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001255 522.0
DYD1_k127_1813134_5 FtsX-like permease family K02004 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001008 526.0
DYD1_k127_1813134_6 Pkd domain containing protein - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001957 467.0
DYD1_k127_1813134_7 Transglycosylase SLT domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005969 405.0
DYD1_k127_1813134_8 The purine nucleoside phosphorylases catalyze the phosphorolytic breakdown of the N-glycosidic bond in the beta- (deoxy)ribonucleoside molecules, with the formation of the corresponding free purine bases and pentose-1-phosphate K03783 - 2.4.2.1 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000418 370.0
DYD1_k127_1813134_9 Creatinine amidohydrolase K01470 - 3.5.2.10 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005512 369.0
DYD1_k127_1814636_0 Belongs to the ClpA ClpB family K03696 - - 0.0 1156.0
DYD1_k127_1814636_1 PFAM MgsA AAA ATPase C terminal K07478 - - 1.765e-207 651.0
DYD1_k127_1814636_2 oxidoreductase activity - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008024 536.0
DYD1_k127_1814636_3 Threonine aldolase K01620 - 4.1.2.48 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005967 456.0
DYD1_k127_1814636_4 Protein of unknown function (DUF3667) - - - 0.0000000000000000000000000000000000000000005885 170.0
DYD1_k127_185125_0 PFAM Zinc carboxypeptidase - - - 0.0 1022.0
DYD1_k127_185125_1 esterase - - - 2.235e-276 859.0
DYD1_k127_185125_10 Gliding motility protein, GldB - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001749 355.0
DYD1_k127_185125_11 Involved in the regulation of the intracellular balance of NAD and NADP, and is a key enzyme in the biosynthesis of NADP. Catalyzes specifically the phosphorylation on 2'-hydroxyl of the adenosine moiety of NAD to yield NADP K00858 - 2.7.1.23 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001033 351.0
DYD1_k127_185125_12 Glycosyl transferase 4-like domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005918 352.0
DYD1_k127_185125_13 Belongs to the sigma-70 factor family. ECF subfamily K03088 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002754 304.0
DYD1_k127_185125_14 PFAM CBS domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000001971 279.0
DYD1_k127_185125_15 Outer membrane protein beta-barrel domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000006118 273.0
DYD1_k127_185125_16 The UvrABC repair system catalyzes the recognition and processing of DNA lesions. UvrA is an ATPase and a DNA-binding protein. A damage recognition complex composed of 2 UvrA and 2 UvrB subunits scans DNA for abnormalities. When the presence of a lesion has been verified by UvrB, the UvrA molecules dissociate K03701 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000004087 258.0
DYD1_k127_185125_17 Belongs to the UPF0312 family - - - 0.00000000000000000000000000000000000000000000000000000000000000000002178 237.0
DYD1_k127_185125_18 Tetratricopeptide repeat - - - 0.00000000000000000000000000000000000000000000000000000000000006195 227.0
DYD1_k127_185125_19 Stage II sporulation protein E (SpoIIE) - - - 0.0000000000000000000000000000000000000000000000000005219 194.0
DYD1_k127_185125_2 MacB-like periplasmic core domain - - - 1.107e-206 670.0
DYD1_k127_185125_20 PFAM Yqey-like protein K09117 - - 0.00000000000000000000000000000000000000000000001106 175.0
DYD1_k127_185125_21 PFAM Colicin V production protein K03558 - - 0.00000000000000000000000000000000000001693 150.0
DYD1_k127_185125_22 Late embryogenesis abundant protein - - - 0.0000000000000000000000000000000000225 139.0
DYD1_k127_185125_24 Sigma-54 interaction domain - - - 0.00000000000000003861 85.0
DYD1_k127_185125_25 DinB superfamily - - - 0.00000001514 63.0
DYD1_k127_185125_3 Amidohydrolase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007378 542.0
DYD1_k127_185125_4 Dehydrogenase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001118 425.0
DYD1_k127_185125_5 alpha/beta hydrolase fold - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003204 407.0
DYD1_k127_185125_6 long-chain fatty acid transport protein - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005141 369.0
DYD1_k127_185125_7 Catalyzes the condensation of isopentenyl diphosphate (IPP) with allylic pyrophosphates generating different type of terpenoids K00806 GO:0002094,GO:0003674,GO:0003824,GO:0004659,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006066,GO:0006629,GO:0006720,GO:0008150,GO:0008152,GO:0008299,GO:0008610,GO:0009058,GO:0009987,GO:0016093,GO:0016094,GO:0016740,GO:0016765,GO:0044237,GO:0044238,GO:0044249,GO:0044255,GO:0044281,GO:0044283,GO:0044424,GO:0044444,GO:0044464,GO:0046165,GO:0071704,GO:1901576,GO:1901615,GO:1901617 2.5.1.31 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007067 360.0
DYD1_k127_185125_8 Outer membrane protein assembly complex, YaeT protein K07277 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002484 361.0
DYD1_k127_185125_9 Catalyzes the complicated ring closure reaction between the two acyclic compounds 1-deoxy-D-xylulose-5-phosphate (DXP) and 3-amino-2-oxopropyl phosphate (1-amino-acetone-3-phosphate or AAP) to form pyridoxine 5'-phosphate (PNP) and inorganic phosphate K03474 GO:0003674,GO:0003824,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006725,GO:0006766,GO:0006767,GO:0006807,GO:0008150,GO:0008152,GO:0008614,GO:0008615,GO:0009058,GO:0009110,GO:0009987,GO:0016740,GO:0016769,GO:0017144,GO:0018130,GO:0019438,GO:0033856,GO:0034641,GO:0042364,GO:0042816,GO:0042819,GO:0044237,GO:0044249,GO:0044271,GO:0044281,GO:0044283,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0051186,GO:0051188,GO:0071704,GO:0072524,GO:0072525,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576,GO:1901615,GO:1901617 2.6.99.2 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003217 351.0
DYD1_k127_187276_0 Oxidoreductase required for the transfer of electrons from pyruvate to flavodoxin K03737 - 1.2.7.1 0.0 1043.0
DYD1_k127_1891044_0 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain K00382 - 1.8.1.4 5.536e-257 799.0
DYD1_k127_1891044_1 Oxidoreductase domain protein - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004017 436.0
DYD1_k127_1891044_10 Lamin Tail Domain - - - 0.0000000000000000000000000000000000000000000000000000117 194.0
DYD1_k127_1891044_11 Phosphohydrolase - - - 0.0000000000000000000000000000000000000000000000000008208 189.0
DYD1_k127_1891044_12 - - - - 0.00000000000000000000000000000000006576 141.0
DYD1_k127_1891044_2 Polysaccharide deacetylase K01452 - 3.5.1.41 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000764 343.0
DYD1_k127_1891044_3 Lumazine binding domain K00793 - 2.5.1.9 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000132 299.0
DYD1_k127_1891044_4 Amidinotransferase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000002056 301.0
DYD1_k127_1891044_5 Glutamine cyclotransferase K00683 - 2.3.2.5 0.00000000000000000000000000000000000000000000000000000000000000000000009923 247.0
DYD1_k127_1891044_6 Belongs to the Dps family K04047 - - 0.000000000000000000000000000000000000000000000000000000000000000006649 228.0
DYD1_k127_1891044_7 PFAM PAP2 superfamily K19302 GO:0003674,GO:0003824,GO:0005975,GO:0006629,GO:0006643,GO:0006644,GO:0006664,GO:0006793,GO:0006796,GO:0008150,GO:0008152,GO:0008610,GO:0008654,GO:0009058,GO:0009245,GO:0009247,GO:0009311,GO:0009312,GO:0009605,GO:0009607,GO:0009987,GO:0016051,GO:0016311,GO:0016787,GO:0016788,GO:0016791,GO:0019637,GO:0042578,GO:0043207,GO:0044237,GO:0044238,GO:0044249,GO:0044255,GO:0044403,GO:0044413,GO:0044415,GO:0044419,GO:0046467,GO:0046493,GO:0050896,GO:0051701,GO:0051704,GO:0051707,GO:0051832,GO:0051834,GO:0052173,GO:0052200,GO:0071704,GO:0075136,GO:0090407,GO:1901135,GO:1901137,GO:1901269,GO:1901271,GO:1901576,GO:1903509 3.6.1.27 0.00000000000000000000000000000000000000000000000000000000000003927 219.0
DYD1_k127_1891044_8 amidase activity K03796 - - 0.0000000000000000000000000000000000000000000000000000001995 204.0
DYD1_k127_1891044_9 Formyl transferase - - - 0.0000000000000000000000000000000000000000000000000000002051 203.0
DYD1_k127_1900450_0 Subtilase family - - - 0.0 1419.0
DYD1_k127_1900450_1 membrane - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006264 383.0
DYD1_k127_1900450_2 Fumarate reductase flavoprotein C-term K00239 - 1.3.5.1,1.3.5.4 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001337 320.0
DYD1_k127_1900450_3 protein related to plant photosystem II stability assembly factor - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000002531 304.0
DYD1_k127_1900450_4 Peroxiredoxin - - - 0.000000000000000000000000000000000000000000000000000000000000000001716 229.0
DYD1_k127_1900450_5 Pfam Adenylate and Guanylate cyclase catalytic domain - - - 0.0000000000000000000000000000000000000000008852 176.0
DYD1_k127_1900450_6 SPTR CHU large protein - - - 0.000000002983 72.0
DYD1_k127_1921343_0 ABC-2 type transporter - - - 0.0 1287.0
DYD1_k127_1921343_1 COGs COG1368 Phosphoglycerol transferase and related protein alkaline phosphatase superfamily - - - 3.038e-199 637.0
DYD1_k127_1921343_2 - - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008639 366.0
DYD1_k127_1921343_3 PFAM DUF218 domain - - - 0.00000000000000000000000000000000000000000000000000000000001154 215.0
DYD1_k127_1921343_4 Excinuclease ABC K07461 - - 0.00000000000000000000002166 103.0
DYD1_k127_1921343_5 Uncharacterized protein conserved in bacteria (DUF2062) K09928 - - 0.000000000000000000005146 98.0
DYD1_k127_1941192_0 Tetratricopeptide repeat - - - 0.0 1023.0
DYD1_k127_1941192_1 Sigma-54 interaction domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005303 522.0
DYD1_k127_1941192_2 Psort location OuterMembrane, score - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006101 462.0
DYD1_k127_1941192_3 TIGRFAM DNA polymerase III, delta subunit K02340 - 2.7.7.7 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000169 381.0
DYD1_k127_1941192_4 PFAM MotA TolQ ExbB proton channel K03561 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000363 327.0
DYD1_k127_1941192_5 Rhomboid family - - - 0.0000000000000000000000000000000000000000000000000000000002575 207.0
DYD1_k127_1941192_7 Lytic transglycosylase with a strong preference for naked glycan strands that lack stem peptides - - - 0.000000000000000000000000000000000004054 145.0
DYD1_k127_1970425_0 Sortilin, neurotensin receptor 3, - - - 0.0 1452.0
DYD1_k127_1970425_1 Belongs to the heme-copper respiratory oxidase family K15862 - 1.9.3.1 0.0 1064.0
DYD1_k127_1970425_10 TIGRFAM cytochrome c oxidase, cbb3-type, subunit III K00406 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000006543 282.0
DYD1_k127_1970425_11 PFAM Biotin lipoate A B protein ligase K03524 - 6.3.4.15 0.0000000000000000000000000000000000000000000000000000000000000000002666 237.0
DYD1_k127_1970425_12 Diacylglycerol kinase catalytic domain - - - 0.000000000000000000000000000000000000000000000000000000000003542 219.0
DYD1_k127_1970425_13 Bacteriocin-protection, YdeI or OmpD-Associated - - - 0.000000000000000000000000000000000000000000000000000000001034 206.0
DYD1_k127_1970425_14 Functions as a ribosomal silencing factor. Interacts with ribosomal protein L14 (rplN), blocking formation of intersubunit bridge B8. Prevents association of the 30S and 50S ribosomal subunits and the formation of functional ribosomes, thus repressing translation K09710 - - 0.000000000000000000000000000000000000000000000007447 174.0
DYD1_k127_1970425_15 PFAM translation initiation factor SUI1 K03113 - - 0.0000000000000000000000000000000000000000009977 158.0
DYD1_k127_1970425_16 Cytochrome C biogenesis protein transmembrane region K09792 - - 0.0000000000000000000000000000001864 132.0
DYD1_k127_1970425_17 Carrier of the growing fatty acid chain in fatty acid biosynthesis K02078 - - 0.000000000000000000000000000002019 122.0
DYD1_k127_1970425_18 - - - - 0.000000000000000000000000001785 122.0
DYD1_k127_1970425_19 FixH K09926 - - 0.00000000000000000000001446 105.0
DYD1_k127_1970425_2 Acts as a processive, ATP-dependent zinc metallopeptidase for both cytoplasmic and membrane proteins. Plays a role in the quality control of integral membrane proteins K03798 - - 0.0 1027.0
DYD1_k127_1970425_21 DnaJ-class molecular chaperone with C-terminal Zn finger domain K05516 - - 0.000000000000001629 86.0
DYD1_k127_1970425_22 PFAM Cbb3-type cytochrome oxidase component FixQ - - - 0.000002679 51.0
DYD1_k127_1970425_3 two component, sigma54 specific, transcriptional regulator, Fis family - - - 5.177e-222 696.0
DYD1_k127_1970425_4 TIGRFAM cytochrome c oxidase accessory protein - - - 1.523e-214 675.0
DYD1_k127_1970425_5 TIGRFAM delta-1-pyrroline-5-carboxylate dehydrogenase, group 1 K00294,K13821 - 1.2.1.88,1.5.5.2 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008346 509.0
DYD1_k127_1970425_6 Protein of unknown function (DUF2911) - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002997 423.0
DYD1_k127_1970425_7 Histidine kinase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001013 396.0
DYD1_k127_1970425_8 Calcineurin-like phosphoesterase K03269 - 3.6.1.54 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000814 381.0
DYD1_k127_1970425_9 Universal stress protein - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000116 306.0
DYD1_k127_2054815_0 PIF1-like helicase - - - 2.071e-207 668.0
DYD1_k127_2054815_1 PFAM glutamine synthetase catalytic region K01915 - 6.3.1.2 4.097e-197 618.0
DYD1_k127_2054815_2 - - - - 0.000000000000000000000000000000000000000003076 159.0
DYD1_k127_2054815_3 transcriptional regulator - - - 0.0000000000000000000000000000000000000001278 155.0
DYD1_k127_2054815_4 PKD domain - - - 0.00000000000000000000000000000000000000522 151.0
DYD1_k127_2054815_5 - - - - 0.000000000000000000001565 98.0
DYD1_k127_2055049_0 COG1529 Aerobic-type carbon monoxide dehydrogenase large subunit CoxL CutL homologs K07303 - 1.3.99.16 0.0 1140.0
DYD1_k127_2055049_1 Beta-lactamase - - - 1.791e-309 969.0
DYD1_k127_2055049_10 Tellurite resistance protein TerB - - - 0.00000000001408 70.0
DYD1_k127_2055049_2 May play a key role in the regulation of the intracellular concentration of adenosylhomocysteine K01251 GO:0000096,GO:0003674,GO:0003824,GO:0004013,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006082,GO:0006139,GO:0006520,GO:0006534,GO:0006555,GO:0006575,GO:0006725,GO:0006732,GO:0006790,GO:0006807,GO:0008150,GO:0008152,GO:0009066,GO:0009069,GO:0009116,GO:0009119,GO:0009987,GO:0016787,GO:0016801,GO:0016802,GO:0017144,GO:0019752,GO:0033353,GO:0034641,GO:0042278,GO:0043436,GO:0044237,GO:0044238,GO:0044281,GO:0044424,GO:0044444,GO:0044464,GO:0046128,GO:0046439,GO:0046483,GO:0046498,GO:0046500,GO:0051186,GO:0055086,GO:0071704,GO:0072521,GO:1901135,GO:1901360,GO:1901564,GO:1901605,GO:1901657 3.3.1.1 1.278e-236 736.0
DYD1_k127_2055049_3 metal-dependent hydrolase with the TIM-barrel fold - - - 1.438e-215 682.0
DYD1_k127_2055049_4 exo-alpha-(2->6)-sialidase activity - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003847 524.0
DYD1_k127_2055049_5 Protein conserved in bacteria - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005975 496.0
DYD1_k127_2055049_6 Major facilitator superfamily K08151 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001909 323.0
DYD1_k127_2055049_7 [2Fe-2S] binding domain K07302 - 1.3.99.16 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000004517 274.0
DYD1_k127_2055049_8 dithiol-disulfide isomerase involved in polyketide biosynthesis K01829 - 5.3.4.1 0.00000000000000000000000000000000000000000000000000000000000000000000000000000003201 272.0
DYD1_k127_2055049_9 Diacylglycerol kinase catalytic domain (presumed) - - - 0.00000000000000000000000000000000001038 147.0
DYD1_k127_2072697_0 Catalyzes the condensation reaction of fatty acid synthesis by the addition to an acyl acceptor of two carbons from malonyl-ACP K09458 - 2.3.1.179 3.003e-211 662.0
DYD1_k127_2072697_1 Digests double-stranded RNA. Involved in the processing of primary rRNA transcript to yield the immediate precursors to the large and small rRNAs (23S and 16S). Processes some mRNAs, and tRNAs when they are encoded in the rRNA operon. Processes pre- crRNA and tracrRNA of type II CRISPR loci if present in the organism K03685 - 3.1.26.3 0.00000000000000000000000000000000000000000000000000000000000000004387 229.0
DYD1_k127_2072697_2 Carrier of the growing fatty acid chain in fatty acid biosynthesis K02078 GO:0000035,GO:0000036,GO:0003674,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005975,GO:0006082,GO:0006629,GO:0006631,GO:0006633,GO:0006643,GO:0006644,GO:0006664,GO:0006793,GO:0006796,GO:0008150,GO:0008152,GO:0008610,GO:0008654,GO:0009058,GO:0009245,GO:0009247,GO:0009311,GO:0009312,GO:0009987,GO:0016051,GO:0016053,GO:0019637,GO:0019752,GO:0019842,GO:0031177,GO:0032787,GO:0033218,GO:0036094,GO:0043167,GO:0043168,GO:0043436,GO:0044237,GO:0044238,GO:0044249,GO:0044255,GO:0044281,GO:0044283,GO:0044424,GO:0044444,GO:0044464,GO:0044620,GO:0046394,GO:0046467,GO:0046493,GO:0048037,GO:0051192,GO:0071704,GO:0072330,GO:0072341,GO:0090407,GO:0140104,GO:1901135,GO:1901137,GO:1901269,GO:1901271,GO:1901576,GO:1903509 - 0.00000000000000000000000000000000000005298 143.0
DYD1_k127_2101377_0 Peptidase dimerisation domain K12941 - - 8.35e-258 802.0
DYD1_k127_2101377_1 Belongs to the alpha-IPM synthase homocitrate synthase family K01649 - 2.3.3.13 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008643 555.0
DYD1_k127_2101377_10 Metal binding domain of Ada - - - 0.000000000000000000002627 95.0
DYD1_k127_2101377_11 Domain of unknown function (DUF4266) - - - 0.00000000002352 66.0
DYD1_k127_2101377_2 Protein of unknown function (DUF3570) - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009845 382.0
DYD1_k127_2101377_3 NAD dependent epimerase/dehydratase family - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005999 349.0
DYD1_k127_2101377_4 Flavin transferase that catalyzes the transfer of the FMN moiety of FAD and its covalent binding to the hydroxyl group of a threonine residue in a target flavoprotein K03734 - 2.7.1.180 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002707 310.0
DYD1_k127_2101377_5 DNA-3-methyladenine K01247,K13529 - 3.2.2.21 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000002379 294.0
DYD1_k127_2101377_6 Catalyzes the oxidation of 3-carboxy-2-hydroxy-4- methylpentanoate (3-isopropylmalate) to 3-carboxy-4-methyl-2- oxopentanoate. The product decarboxylates to 4-methyl-2 oxopentanoate K00052 - 1.1.1.85 0.000000000000000000000000000000000000000000000000000000000000000000000000000007086 263.0
DYD1_k127_2101377_7 Thioesterase-like superfamily - - - 0.000000000000000000000000000000000000000000000000004804 184.0
DYD1_k127_2101377_8 Peptidase family M20/M25/M40 - - - 0.00000000000000000000000000000000000000000000004326 173.0
DYD1_k127_2101377_9 Thiol-disulfide isomerase - - - 0.0000000000000000000000000001784 119.0
DYD1_k127_2109126_0 MacB-like periplasmic core domain K02004 - - 2.093e-297 932.0
DYD1_k127_2109126_1 permease K02004 - - 1.661e-269 852.0
DYD1_k127_2109126_10 Fatty acid hydroxylase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005748 507.0
DYD1_k127_2109126_11 FtsX-like permease family - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008598 520.0
DYD1_k127_2109126_12 FtsX-like permease family K02004 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003239 503.0
DYD1_k127_2109126_13 FtsX-like permease family - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004665 503.0
DYD1_k127_2109126_14 Histidine kinase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008353 469.0
DYD1_k127_2109126_15 Peptidase family M20/M25/M40 K06016 - 3.5.1.6,3.5.1.87 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009201 368.0
DYD1_k127_2109126_16 transcriptional regulatory protein - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000001949 297.0
DYD1_k127_2109126_17 - - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000001543 291.0
DYD1_k127_2109126_18 Uncharacterised ACR (DUF711) K09157 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000001053 286.0
DYD1_k127_2109126_19 Transcriptional regulator PadR-like family - - - 0.000000000000000000000000000000000000000000000001069 177.0
DYD1_k127_2109126_2 MacB-like periplasmic core domain - - - 3.024e-215 693.0
DYD1_k127_2109126_20 Putative auto-transporter adhesin, head GIN domain - - - 0.0000000000000000000000000000000000000006878 156.0
DYD1_k127_2109126_21 DNA-binding protein - - - 0.00001507 49.0
DYD1_k127_2109126_3 Outer membrane receptor for Fe3 -dicitrate K16091 - - 4.239e-215 693.0
DYD1_k127_2109126_4 sulfatase - - - 3.791e-210 672.0
DYD1_k127_2109126_5 MacB-like periplasmic core domain - - - 5.632e-207 671.0
DYD1_k127_2109126_6 two component, sigma54 specific, transcriptional regulator, Fis family - - - 2.25e-206 650.0
DYD1_k127_2109126_7 MacB-like periplasmic core domain - - - 5.633e-199 646.0
DYD1_k127_2109126_8 Sulfate permease family K03321 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001823 608.0
DYD1_k127_2109126_9 FtsX-like permease family - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002234 580.0
DYD1_k127_2110302_0 Provides the precursors necessary for DNA synthesis. Catalyzes the biosynthesis of deoxyribonucleotides from the corresponding ribonucleotides K00525 - 1.17.4.1 6.519e-257 796.0
DYD1_k127_2110302_1 reductase, small chain K00526 - 1.17.4.1 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001139 584.0
DYD1_k127_2110302_2 This protein binds to 23S rRNA in the presence of protein L20 K02888 GO:0003674,GO:0003735,GO:0005198 - 0.00000000000000000000000000000000000000000005593 162.0
DYD1_k127_2110302_3 Belongs to the bacterial ribosomal protein bL27 family K02899 GO:0003674,GO:0003735,GO:0005198,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0015934,GO:0022625,GO:0022626,GO:0032991,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:1990904 - 0.000000000000005482 74.0
DYD1_k127_2115367_0 Prolyl oligopeptidase family - - - 1.967e-312 982.0
DYD1_k127_2115367_1 X-Pro dipeptidyl-peptidase C-terminal non-catalytic domain K06978 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003125 347.0
DYD1_k127_2115367_2 Interacts with outer membrane receptor proteins that carry out high-affinity binding and energy dependent uptake into the periplasmic space of specific substrates. It could act to transduce energy from the cytoplasmic membrane to specific energy- requiring processes in the outer membrane, resulting in the release into the periplasm of ligands bound by these outer membrane proteins K03832 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000001043 254.0
DYD1_k127_2115367_3 COGs COG4270 membrane protein - - - 0.00000009362 55.0
DYD1_k127_2141059_0 FAD linked oxidases, C-terminal domain - - - 0.0 1224.0
DYD1_k127_2141059_1 L-lactate permease K03303 - - 5.78e-214 678.0
DYD1_k127_2141059_2 MgtE intracellular N domain - - - 0.00000000000000000000000000000000001301 138.0
DYD1_k127_2163958_0 Involved in mRNA degradation. Catalyzes the phosphorolysis of single-stranded polyribonucleotides processively in the 3'- to 5'-direction K00962 - 2.7.7.8 0.0 1048.0
DYD1_k127_2163958_1 Participates in initiation and elongation during chromosome replication K02314 - 3.6.4.12 1.463e-233 732.0
DYD1_k127_2163958_10 DNA polymerase III K02342 - 2.7.7.7 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008454 377.0
DYD1_k127_2163958_11 Electron transfer flavoprotein K03521 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004081 375.0
DYD1_k127_2163958_12 Peptidase family M48 - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000463 373.0
DYD1_k127_2163958_13 PFAM Uncharacterised ACR, COG1259 K08999 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000001053 300.0
DYD1_k127_2163958_14 Belongs to the LOG family K06966 - 3.2.2.10 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000003703 291.0
DYD1_k127_2163958_15 Reduction of activated sulfate into sulfite K00390 - 1.8.4.10,1.8.4.8 0.0000000000000000000000000000000000000000000000000000000000000000000000002635 254.0
DYD1_k127_2163958_16 PFAM alkyl hydroperoxide reductase Thiol specific antioxidant Mal allergen K03564 - 1.11.1.15 0.0000000000000000000000000000000000000000000000000000000000000000000003957 242.0
DYD1_k127_2163958_17 PFAM fumarylacetoacetate (FAA) hydrolase - - - 0.00000000000000000000000000000000000000000000000000000000000000009657 227.0
DYD1_k127_2163958_18 Pfam Activator of Hsp90 ATPase homolog 1-like protein - - - 0.00000000000000000000000000000000000000000000009751 171.0
DYD1_k127_2163958_19 Reversible hydration of carbon dioxide K01673 - 4.2.1.1 0.000000000000000000000000000000000000000000002326 172.0
DYD1_k127_2163958_2 lysine biosynthetic process via aminoadipic acid - - - 1.277e-224 718.0
DYD1_k127_2163958_20 Thioredoxin reductase K00384 - 1.8.1.9 0.000000000000000000000000000000000000005223 145.0
DYD1_k127_2163958_21 Forms an intersubunit bridge (bridge B4) with the 23S rRNA of the 50S subunit in the ribosome K02956 GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0015935,GO:0022626,GO:0022627,GO:0032991,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:1990904 - 0.000000000000000000000000000000000001316 139.0
DYD1_k127_2163958_22 GIY-YIG catalytic domain K07461 - - 0.0000000000000000000000000002713 117.0
DYD1_k127_2163958_23 Transketolase K00615 - 2.2.1.1 0.0000000000000000000000001923 107.0
DYD1_k127_2163958_24 belongs to the thioredoxin family K03671,K20543 - - 0.00000000000000206 79.0
DYD1_k127_2163958_25 Belongs to the UPF0337 (CsbD) family - - - 0.00000001519 59.0
DYD1_k127_2163958_26 gas vesicle protein - - - 0.000008339 52.0
DYD1_k127_2163958_3 PFAM Na dependent nucleoside transporter K03317 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000246 608.0
DYD1_k127_2163958_4 PFAM Peptidase family M23 - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005131 577.0
DYD1_k127_2163958_5 Permease YjgP YjgQ family K07091 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002364 567.0
DYD1_k127_2163958_6 Mur ligase middle domain K01924,K02558 - 6.3.2.45,6.3.2.8 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001333 552.0
DYD1_k127_2163958_7 Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released K03086 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004566 527.0
DYD1_k127_2163958_8 Electron transfer flavoprotein, alpha subunit K03522 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004063 459.0
DYD1_k127_2163958_9 alcohol dehydrogenase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001399 430.0
DYD1_k127_2166770_0 Belongs to the DEAD box helicase family - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003148 546.0
DYD1_k127_2166770_1 fatty acid desaturase K00507 - 1.14.19.1 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002462 428.0
DYD1_k127_2166770_2 Gamma-glutamyltranspeptidase K00681 - 2.3.2.2,3.4.19.13 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003288 396.0
DYD1_k127_2166770_3 Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released K03086 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000001777 301.0
DYD1_k127_2166770_4 Sigma-70 region 2 - - - 0.0000000000000000000000000000000000000000000000000000009774 198.0
DYD1_k127_2166770_5 Gamma-glutamyltranspeptidase K00681 - 2.3.2.2,3.4.19.13 0.00000000000000000000000000000000000000000000005104 169.0
DYD1_k127_2166770_6 'Cold-shock' DNA-binding domain K03704 - - 0.00000000000000000000000001984 109.0
DYD1_k127_2197606_0 DEAD DEAH box helicase K03579 - 3.6.4.13 0.0 1277.0
DYD1_k127_2197606_1 Sulfate permease family K03321 - - 5.993e-233 731.0
DYD1_k127_2197606_10 Acetyltransferase (GNAT) domain - - - 0.000000000000000000000000000000000000000000000000000003378 193.0
DYD1_k127_2197606_11 Pentapeptide repeats (9 copies) - - - 0.0000000000000000000000000000000000000000000000001824 184.0
DYD1_k127_2197606_12 Belongs to the glycosyl hydrolase 31 family K01187 - 3.2.1.20 0.000000000000000000000000000000000000000000000001113 184.0
DYD1_k127_2197606_13 Cupin domain - - - 0.0000000000000000000000000000001048 127.0
DYD1_k127_2197606_14 Hsp20/alpha crystallin family K13993 - - 0.00000000000000000000000000003509 123.0
DYD1_k127_2197606_15 N-acetylphosphatidylethanolamine-hydrolysing phospholipas activity - - - 0.00000000000000000000000001232 123.0
DYD1_k127_2197606_16 - - - - 0.00000005062 56.0
DYD1_k127_2197606_2 lysine biosynthetic process via aminoadipic acid - - - 3.017e-229 731.0
DYD1_k127_2197606_3 PFAM D-aminoacylase, C-terminal region K06015 - 3.5.1.81 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005605 558.0
DYD1_k127_2197606_4 Pirin C-terminal cupin domain K06911 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002647 521.0
DYD1_k127_2197606_5 Reversible hydration of carbon dioxide K01673 - 4.2.1.1 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001385 320.0
DYD1_k127_2197606_6 KR domain K00059 - 1.1.1.100 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000594 276.0
DYD1_k127_2197606_7 PFAM Bacterial lipid A biosynthesis acyltransferase K02517 - 2.3.1.241 0.00000000000000000000000000000000000000000000000000000000000000000000000001083 261.0
DYD1_k127_2197606_8 Domain amino terminal to FKBP-type peptidyl-prolyl isomerase K03772,K03773 - 5.2.1.8 0.00000000000000000000000000000000000000000000000000000000000000000000004039 250.0
DYD1_k127_2197606_9 PFAM Rhomboid family - - - 0.000000000000000000000000000000000000000000000000000000000000004667 222.0
DYD1_k127_2247147_0 Beta-lactamase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001146 444.0
DYD1_k127_2247147_1 S1 P1 nuclease - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002008 398.0
DYD1_k127_2247147_2 PFAM Glycosyl transferase family 2 - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000303 353.0
DYD1_k127_2247147_3 PFAM Peptidase M1 membrane alanine aminopeptidase K01256 - 3.4.11.2 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000137 329.0
DYD1_k127_2247147_4 Belongs to the sigma-70 factor family. ECF subfamily K03088 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000294 317.0
DYD1_k127_2247147_5 Specifically methylates the N7 position of a guanine in 16S rRNA K03501 GO:0000154,GO:0001510,GO:0003674,GO:0003824,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006139,GO:0006364,GO:0006396,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0008168,GO:0008170,GO:0008173,GO:0008649,GO:0008757,GO:0009451,GO:0009987,GO:0010467,GO:0016070,GO:0016072,GO:0016435,GO:0016740,GO:0016741,GO:0022613,GO:0031167,GO:0032259,GO:0034470,GO:0034641,GO:0034660,GO:0036265,GO:0042254,GO:0043170,GO:0043412,GO:0043414,GO:0044085,GO:0044237,GO:0044238,GO:0044260,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0070043,GO:0070475,GO:0070476,GO:0071704,GO:0071840,GO:0090304,GO:0140098,GO:0140102,GO:1901360 2.1.1.170 0.0000000000000000000000000000000000000000000000000000000000000000000000000000003344 269.0
DYD1_k127_2285553_0 Produces ATP from ADP in the presence of a proton gradient across the membrane. The alpha chain is a regulatory subunit K02111 - 3.6.3.14 3.332e-279 864.0
DYD1_k127_2285553_1 Tetratricopeptide repeats - - - 3.512e-228 734.0
DYD1_k127_2285553_10 F(1)F(0) ATP synthase produces ATP from ADP in the presence of a proton or sodium gradient. F-type ATPases consist of two structural domains, F(1) containing the extramembraneous catalytic core and F(0) containing the membrane proton channel, linked together by a central stalk and a peripheral stalk. During catalysis, ATP synthesis in the catalytic domain of F(1) is coupled via a rotary mechanism of the central stalk subunits to proton translocation K02110 GO:0003674,GO:0003824,GO:0005215,GO:0005575,GO:0005622,GO:0005623,GO:0006139,GO:0006163,GO:0006164,GO:0006725,GO:0006753,GO:0006754,GO:0006793,GO:0006796,GO:0006807,GO:0006810,GO:0006811,GO:0006812,GO:0008150,GO:0008152,GO:0008324,GO:0009058,GO:0009117,GO:0009123,GO:0009124,GO:0009126,GO:0009127,GO:0009141,GO:0009142,GO:0009144,GO:0009145,GO:0009150,GO:0009152,GO:0009156,GO:0009161,GO:0009165,GO:0009167,GO:0009168,GO:0009199,GO:0009201,GO:0009205,GO:0009206,GO:0009259,GO:0009260,GO:0009987,GO:0015075,GO:0015077,GO:0015078,GO:0015318,GO:0015399,GO:0015405,GO:0015672,GO:0015985,GO:0015986,GO:0016020,GO:0016462,GO:0016469,GO:0016787,GO:0016817,GO:0016818,GO:0016887,GO:0017111,GO:0017144,GO:0018130,GO:0019438,GO:0019637,GO:0019693,GO:0019829,GO:0022804,GO:0022853,GO:0022857,GO:0022890,GO:0032991,GO:0033177,GO:0034220,GO:0034641,GO:0034654,GO:0042623,GO:0042625,GO:0042626,GO:0043492,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0044424,GO:0044425,GO:0044464,GO:0044769,GO:0045259,GO:0045263,GO:0046034,GO:0046390,GO:0046483,GO:0046933,GO:0051179,GO:0051234,GO:0055085,GO:0055086,GO:0071704,GO:0072521,GO:0072522,GO:0090407,GO:0090662,GO:0098655,GO:0098660,GO:0098662,GO:0098796,GO:0099131,GO:0099132,GO:1901135,GO:1901137,GO:1901293,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576,GO:1902600 - 0.0000000000000000000002368 98.0
DYD1_k127_2285553_11 Methyltransferase domain - - - 0.0000000000000001225 83.0
DYD1_k127_2285553_2 Produces ATP from ADP in the presence of a proton gradient across the membrane. The gamma chain is believed to be important in regulating ATPase activity and the flow of protons through the CF(0) complex K02115 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004734 385.0
DYD1_k127_2285553_3 it plays a direct role in the translocation of protons across the membrane K02108 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003765 366.0
DYD1_k127_2285553_4 PFAM Peptidase family M23 - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007302 333.0
DYD1_k127_2285553_5 F(1)F(0) ATP synthase produces ATP from ADP in the presence of a proton or sodium gradient. F-type ATPases consist of two structural domains, F(1) containing the extramembraneous catalytic core and F(0) containing the membrane proton channel, linked together by a central stalk and a peripheral stalk. During catalysis, ATP synthesis in the catalytic domain of F(1) is coupled via a rotary mechanism of the central stalk subunits to proton translocation K02113 - - 0.00000000000000000000000000000000000000000000000000000000000004761 218.0
DYD1_k127_2285553_6 Polymer-forming cytoskeletal - - - 0.000000000000000000000000000000000000000000000000000000006982 201.0
DYD1_k127_2285553_7 Component of the F(0) channel, it forms part of the peripheral stalk, linking F(1) to F(0) K02109 - - 0.00000000000000000000000000000000000000000000002077 175.0
DYD1_k127_2285553_8 Penicillin binding protein transpeptidase K05366 - 2.4.1.129,3.4.16.4 0.00000000000000000000000000000000000002057 147.0
DYD1_k127_2285553_9 - - - - 0.0000000000000000000000000000001156 134.0
DYD1_k127_2288840_0 Superfamily I DNA and RNA - - - 0.0 1439.0
DYD1_k127_2288840_1 damaged site, the DNA wraps around one UvrB monomer. DNA wrap is dependent on ATP binding by UvrB and probably causes local melting of the DNA helix, facilitating insertion of UvrB beta-hairpin between the DNA strands. Then UvrB probes one DNA strand for the presence of a lesion. If a lesion is found the UvrA subunits dissociate and the UvrB-DNA preincision complex is formed. This complex is subsequently bound by UvrC and the second UvrB is released. If no lesion is found, the DNA wraps around the other UvrB subunit that will check the other stand for damage K03702 - - 0.0 1100.0
DYD1_k127_2288840_10 Domain of unknown function (DUF368) K08974 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001743 368.0
DYD1_k127_2288840_11 Rhodanese Homology Domain K01011 - 2.8.1.1,2.8.1.2 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007839 329.0
DYD1_k127_2288840_12 Tetratricopeptide repeat - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001226 308.0
DYD1_k127_2288840_13 PFAM NAD dependent epimerase dehydratase family K00091 - 1.1.1.219 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000001569 293.0
DYD1_k127_2288840_14 - - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000008869 273.0
DYD1_k127_2288840_15 PFAM Shikimate dehydrogenase substrate binding domain K00014 - 1.1.1.25 0.0000000000000000000000000000000000000000000000000000000000000000000000000000004733 271.0
DYD1_k127_2288840_16 capsular polysaccharide biosynthesis protein K01104 - 3.1.3.48 0.00000000000000000000000000000000000000000000000000000000000000000000001303 249.0
DYD1_k127_2288840_17 Belongs to the UPF0312 family - - - 0.000000000000000000000000000000000000000000000000000000000000000000004749 238.0
DYD1_k127_2288840_18 Helix-hairpin-helix motif - - - 0.000000000000000000000000000000000000000000000000000000000001241 220.0
DYD1_k127_2288840_19 Catalyzes the epimerization of the C3' and C5'positions of dTDP-6-deoxy-D-xylo-4-hexulose, forming dTDP-6-deoxy-L-lyxo-4- hexulose K01790 - 5.1.3.13 0.000000000000000000000000000000000000000000000000000000000005809 213.0
DYD1_k127_2288840_2 TIGRFAM capsular exopolysaccharide family - - - 1.749e-225 722.0
DYD1_k127_2288840_20 Polysaccharide biosynthesis/export protein K01991 - - 0.00000000000000000000000000000000000000000000000000000000001656 216.0
DYD1_k127_2288840_21 N-formylglutamate amidohydrolase - - - 0.000000000000000000000000000000000000000000000000000000000901 208.0
DYD1_k127_2288840_22 Cyclic nucleotide-binding domain - - - 0.0000000000000000000000000000000000000000000000000000003713 199.0
DYD1_k127_2288840_23 Aminoacyl-tRNA editing domain K19055 - - 0.000000000000000000000000000000001319 135.0
DYD1_k127_2288840_24 endonuclease containing a URI domain K07461 - - 0.000000000000000000000000005345 111.0
DYD1_k127_2288840_25 - - - - 0.0000000000000000000002997 101.0
DYD1_k127_2288840_3 PFAM Tetratricopeptide repeat - - - 1.011e-198 629.0
DYD1_k127_2288840_4 Peptidase dimerisation domain K12941 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006543 589.0
DYD1_k127_2288840_5 RimK-like ATPgrasp N-terminal domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000229 550.0
DYD1_k127_2288840_6 Glutamate-cysteine ligase family 2(GCS2) K06048 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004479 479.0
DYD1_k127_2288840_7 GTPase that associates with the 50S ribosomal subunit and may have a role during protein synthesis or ribosome biogenesis K03665 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001812 467.0
DYD1_k127_2288840_8 Glycosyl transferase 4-like K13004 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003248 466.0
DYD1_k127_2288840_9 PFAM (2R)-phospho-3-sulfolactate synthase ComA K08097 - 4.4.1.19 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001612 455.0
DYD1_k127_2308140_0 COGs COG5616 integral membrane protein - - - 0.000000000000000000000000000000000000000008483 175.0
DYD1_k127_2360588_0 DNA polymerase Ligase (LigD) - - - 0.0 1021.0
DYD1_k127_2360588_1 PFAM GlcNAc-PI de-N-acetylase - - - 1.455e-298 937.0
DYD1_k127_2360588_10 - - - - 0.000000000000000000000000000000000000000000000000000975 188.0
DYD1_k127_2360588_11 peptidyl-tyrosine sulfation - - - 0.000000000000000000000000000000000000000000000006094 178.0
DYD1_k127_2360588_12 ABC-2 type transporter - - - 0.00000000000000000000000000000000000000003725 160.0
DYD1_k127_2360588_14 copper resistance K07233,K07798,K14588 - - 0.000000000001334 73.0
DYD1_k127_2360588_2 ABC transporter K15738 - - 1.13e-211 675.0
DYD1_k127_2360588_3 transporter - - - 1.263e-207 656.0
DYD1_k127_2360588_4 Belongs to the sodium solute symporter (SSF) (TC 2.A.21) family - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001687 609.0
DYD1_k127_2360588_5 unusual protein kinase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003883 550.0
DYD1_k127_2360588_6 PFAM Histone deacetylase domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002952 442.0
DYD1_k127_2360588_7 With LigD forms a non-homologous end joining (NHEJ) DNA repair enzyme, which repairs dsDNA breaks with reduced fidelity. Binds linear dsDNA with 5'- and 3'- overhangs but not closed circular dsDNA nor ssDNA. Recruits and stimulates the ligase activity of LigD K10979 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000197 377.0
DYD1_k127_2360588_8 TPR repeat-containing protein - - - 0.00000000000000000000000000000000000000000000000000000000000000008651 237.0
DYD1_k127_2360588_9 - - - - 0.0000000000000000000000000000000000000000000000000000000002599 210.0
DYD1_k127_2364083_0 Inner membrane protein CreD K06143 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001049 362.0
DYD1_k127_2364083_1 membrane - - - 0.000000000000000000000000000000000000000000000000000000000003851 217.0
DYD1_k127_2364083_2 - - - - 0.0000000000000000000000000000000000000000002611 164.0
DYD1_k127_2364083_3 belongs to the aldehyde dehydrogenase family - - - 0.000000000000000000000000000000000000004279 145.0
DYD1_k127_2364083_4 transcriptional regulator - - - 0.00000000000000000000000000000000003513 138.0
DYD1_k127_2364083_5 - - - - 0.00000000000000000000000000002026 123.0
DYD1_k127_2434455_0 Oxidoreductase - - - 1.477e-297 921.0
DYD1_k127_2434455_1 Gluconate 2-dehydrogenase subunit 3 - - - 0.00000000000000000000000000000000000000000000000000000000001465 210.0
DYD1_k127_2434455_2 Protein of unknown function (DUF4199) - - - 0.000000000000000000000000000000000000000000000045 175.0
DYD1_k127_2434455_3 helix_turn_helix, Lux Regulon - - - 0.0000000000000000000000000000000000001873 145.0
DYD1_k127_2450752_0 FtsX-like permease family K02004 - - 8.21e-321 1002.0
DYD1_k127_2450752_1 ABC transporter K02003 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003058 331.0
DYD1_k127_2450752_2 GDSL-like Lipase/Acylhydrolase family K10804 - 3.1.1.5 0.0000000000000000000000000000000000000000000000000000000000000000000001414 242.0
DYD1_k127_2450752_3 C-terminal domain of CHU protein family - - - 0.000000000000000000000000000000000000000000000000000006439 200.0
DYD1_k127_2452754_0 PFAM peptidase M13 K07386 - - 2.931e-311 965.0
DYD1_k127_2452754_1 OsmC-like protein K04063 - - 0.00000000000000000000000000000000000000000000000002905 181.0
DYD1_k127_2452754_2 nuclease activity K02335 GO:0003674,GO:0003676,GO:0003677,GO:0003824,GO:0003887,GO:0004518,GO:0004527,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006139,GO:0006259,GO:0006260,GO:0006261,GO:0006281,GO:0006284,GO:0006725,GO:0006807,GO:0006950,GO:0006974,GO:0008150,GO:0008152,GO:0008408,GO:0008409,GO:0009058,GO:0009059,GO:0009987,GO:0016740,GO:0016772,GO:0016779,GO:0016787,GO:0016788,GO:0018130,GO:0019438,GO:0033554,GO:0034061,GO:0034641,GO:0034645,GO:0034654,GO:0043170,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044271,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0050896,GO:0051716,GO:0071704,GO:0071897,GO:0090304,GO:0090305,GO:0097159,GO:0140097,GO:1901360,GO:1901362,GO:1901363,GO:1901576 2.7.7.7 0.00000000000000000000000000000000000006019 144.0
DYD1_k127_2485780_0 4Fe-4S dicluster domain K00184 - - 0.0 1279.0
DYD1_k127_2485780_1 PFAM Orn Lys Arg decarboxylase, C-terminal domain K01584 - 4.1.1.19 0.0 1179.0
DYD1_k127_2485780_10 PFAM Class III cytochrome C family - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003692 485.0
DYD1_k127_2485780_11 Subunits I and II form the functional core of the enzyme complex. Electrons originating in cytochrome c are transferred via heme a and Cu(A) to the binuclear center formed by heme a3 and Cu(B) K02275 - 1.9.3.1 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004081 439.0
DYD1_k127_2485780_12 PFAM Nitrilase cyanide hydratase and apolipoprotein N-acyltransferase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000021 434.0
DYD1_k127_2485780_13 Cytochrome c - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002229 421.0
DYD1_k127_2485780_14 Converts heme B (protoheme IX) to heme O by substitution of the vinyl group on carbon 2 of heme B porphyrin ring with a hydroxyethyl farnesyl side group K02257 - 2.5.1.141 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002742 415.0
DYD1_k127_2485780_15 cytochrome c oxidase subunit III K02276 - 1.9.3.1 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002622 396.0
DYD1_k127_2485780_16 Acyl-coenzyme A:6-aminopenicillanic acid acyl-transferase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002584 385.0
DYD1_k127_2485780_17 ABC-type transport system involved in resistance to organic solvents, ATPase component K02065 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007097 380.0
DYD1_k127_2485780_18 ABC-type transport system involved in resistance to organic solvents permease component K02066 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001603 344.0
DYD1_k127_2485780_19 Cytochrome oxidase assembly protein K02259 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002347 317.0
DYD1_k127_2485780_2 Belongs to the heme-copper respiratory oxidase family K02274 - 1.9.3.1 0.0 1111.0
DYD1_k127_2485780_20 Belongs to the short-chain dehydrogenases reductases (SDR) family - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000002214 283.0
DYD1_k127_2485780_21 Quinol cytochrome c oxidoreductase membrane protein - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000002038 276.0
DYD1_k127_2485780_22 PFAM cytochrome c oxidase subunit III K02276 - 1.9.3.1 0.000000000000000000000000000000000000000000000000000000000000000000000000003416 257.0
DYD1_k127_2485780_23 PFAM Cytochrome C - - - 0.000000000000000000000000000000000000000000000000000000000000000000000005104 249.0
DYD1_k127_2485780_24 Protein of unknown function (DUF420) K08976 - - 0.000000000000000000000000000000000000000000000000000000000000000000004959 237.0
DYD1_k127_2485780_25 Glyoxalase bleomycin resistance protein dioxygenase K06996 - - 0.0000000000000000000000000000000000000000000002008 170.0
DYD1_k127_2485780_26 YjbR - - - 0.0000000000000000000000000000000000000000000008893 168.0
DYD1_k127_2485780_28 - - - - 0.0000000000000000000000000000000000000000199 160.0
DYD1_k127_2485780_29 Prokaryotic Cytochrome C oxidase subunit IV - - - 0.0000000000000000000000000000000001432 135.0
DYD1_k127_2485780_3 Converts 2C-methyl-D-erythritol 2,4-cyclodiphosphate (ME-2,4cPP) into 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate K03526 GO:0003674,GO:0003824,GO:0006081,GO:0006082,GO:0006090,GO:0006629,GO:0006644,GO:0006720,GO:0006793,GO:0006796,GO:0008150,GO:0008152,GO:0008299,GO:0008610,GO:0008654,GO:0009058,GO:0009240,GO:0009987,GO:0016491,GO:0016725,GO:0019288,GO:0019637,GO:0019682,GO:0019752,GO:0032787,GO:0043436,GO:0044237,GO:0044238,GO:0044249,GO:0044255,GO:0044281,GO:0046429,GO:0046490,GO:0052592,GO:0055114,GO:0071704,GO:0090407,GO:1901135,GO:1901576 1.17.7.1,1.17.7.3 6.047e-314 972.0
DYD1_k127_2485780_30 Protein of unknown function (DUF983) - - - 0.000000000000000000000000000003963 123.0
DYD1_k127_2485780_31 - - - - 0.00000000000000002147 84.0
DYD1_k127_2485780_32 - - - - 0.00000000000000003821 83.0
DYD1_k127_2485780_33 - - - - 0.000000000000002004 83.0
DYD1_k127_2485780_34 protein SCO1 SenC PrrC involved in biogenesis of respiratory and photosynthetic systems K07152 - - 0.000000002078 65.0
DYD1_k127_2485780_4 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase - - - 2.449e-256 833.0
DYD1_k127_2485780_5 PFAM Polysulphide reductase, NrfD K00185 - - 1.347e-251 781.0
DYD1_k127_2485780_6 ATP-grasp domain - - - 5.602e-242 757.0
DYD1_k127_2485780_7 Quinol cytochrome c oxidoreductase - - - 1.838e-203 641.0
DYD1_k127_2485780_8 Aminotransferase class-III K07250 - 2.6.1.19,2.6.1.22 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008862 581.0
DYD1_k127_2485780_9 Amino acid permease K11733 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004344 500.0
DYD1_k127_253691_0 Catalyzes the anaerobic formation of alpha-ketobutyrate and ammonia from threonine in a two-step reaction. The first step involved a dehydration of threonine and a production of enamine intermediates (aminocrotonate), which tautomerizes to its imine form (iminobutyrate). Both intermediates are unstable and short- lived. The second step is the nonenzymatic hydrolysis of the enamine imine intermediates to form 2-ketobutyrate and free ammonia. In the low water environment of the cell, the second step is accelerated by RidA K01754 - 4.3.1.19 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000166 334.0
DYD1_k127_253691_1 COGs COG1914 Mn2 and Fe2 transporter of the NRAMP family - - - 0.0000000000000000000000000000000000000000000000000000003107 197.0
DYD1_k127_253691_2 PFAM Histone deacetylase - - - 0.0000000000000000000008381 95.0
DYD1_k127_2628775_0 ABC-2 type transporter K21397 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001956 604.0
DYD1_k127_2628775_1 - - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001713 425.0
DYD1_k127_2628775_2 - - - - 0.0000000000000000000000000000000000000000000000000000000007313 203.0
DYD1_k127_2628775_3 PFAM phospholipase Carboxylesterase - - - 0.0000000000000000000000000000000000000000000000000001047 191.0
DYD1_k127_2650722_0 MacB-like periplasmic core domain K02004 - - 0.0 1067.0
DYD1_k127_2650722_1 PFAM Type III restriction enzyme, res subunit - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005237 391.0
DYD1_k127_2650722_2 Domain of unknown function (DUF4918) - - - 0.00000000000000000000000000000000000000000000000000000000000000000000003475 245.0
DYD1_k127_2661877_0 Belongs to the sodium solute symporter (SSF) (TC 2.A.21) family - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001254 597.0
DYD1_k127_2661877_1 metallopeptidase activity K01181 - 3.2.1.8 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004891 501.0
DYD1_k127_2661877_10 PFAM ATP-dependent Clp protease adaptor protein ClpS K06891 - - 0.000000000000000000000000000000000002728 139.0
DYD1_k127_2661877_2 Functions as a peptidoglycan terminase that cleaves nascent peptidoglycan strands endolytically to terminate their elongation K07082 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003408 451.0
DYD1_k127_2661877_3 Belongs to the ClpA ClpB family K03696 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000311 377.0
DYD1_k127_2661877_4 TIGRFAM YihY family protein (not ribonuclease BN) K07058 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001638 361.0
DYD1_k127_2661877_5 May play a role in DNA repair. It seems to be involved in an RecBC-independent recombinational process of DNA repair. It may act with RecF and RecO K06187 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000002784 289.0
DYD1_k127_2661877_6 Belongs to the SUA5 family - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000791 271.0
DYD1_k127_2661877_7 TIGRFAM acyl-CoA thioester hydrolase, YbgC YbaW family K07107 - - 0.000000000000000000000000000000000000000000000000000000636 195.0
DYD1_k127_2661877_8 PFAM WbqC-like protein family - - - 0.00000000000000000000000000000000000000000000000000000187 198.0
DYD1_k127_2661877_9 PFAM 6-O-methylguanine DNA methyltransferase, DNA binding domain K00567,K07443 - 2.1.1.63 0.00000000000000000000000000000000000000008333 153.0
DYD1_k127_2673030_0 - - - - 0.0 1607.0
DYD1_k127_2673030_1 Aminopeptidase N - - - 0.0 1045.0
DYD1_k127_2673030_10 in asymptomatic bacteriuria E. coli strains 83972 and VR50, the ygiD gene is upregulated during biofilm formation in urine K15777 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005775 404.0
DYD1_k127_2673030_11 Fatty acid hydroxylase superfamily - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001421 404.0
DYD1_k127_2673030_12 Type ii and iii secretion system protein - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001506 412.0
DYD1_k127_2673030_13 Glycine betaine K05845 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001992 391.0
DYD1_k127_2673030_14 PFAM X-Pro dipeptidyl-peptidase C-terminal non-catalytic domain K06978 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001383 391.0
DYD1_k127_2673030_15 Involved in the gluconeogenesis. Catalyzes stereospecifically the conversion of dihydroxyacetone phosphate (DHAP) to D-glyceraldehyde-3-phosphate (G3P) K01803 GO:0003674,GO:0003824,GO:0004807,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005975,GO:0005996,GO:0006006,GO:0006066,GO:0006071,GO:0006081,GO:0006082,GO:0006090,GO:0006091,GO:0006094,GO:0006096,GO:0006139,GO:0006163,GO:0006164,GO:0006165,GO:0006725,GO:0006732,GO:0006733,GO:0006753,GO:0006754,GO:0006757,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0009056,GO:0009058,GO:0009108,GO:0009117,GO:0009123,GO:0009124,GO:0009126,GO:0009127,GO:0009132,GO:0009135,GO:0009141,GO:0009142,GO:0009144,GO:0009145,GO:0009150,GO:0009152,GO:0009156,GO:0009161,GO:0009165,GO:0009166,GO:0009167,GO:0009168,GO:0009179,GO:0009185,GO:0009199,GO:0009201,GO:0009205,GO:0009206,GO:0009259,GO:0009260,GO:0009987,GO:0016051,GO:0016052,GO:0016053,GO:0016310,GO:0016853,GO:0016860,GO:0016861,GO:0017144,GO:0018130,GO:0019318,GO:0019319,GO:0019359,GO:0019362,GO:0019363,GO:0019400,GO:0019405,GO:0019438,GO:0019439,GO:0019563,GO:0019637,GO:0019682,GO:0019693,GO:0019751,GO:0019752,GO:0032787,GO:0034404,GO:0034641,GO:0034654,GO:0034655,GO:0042866,GO:0043436,GO:0044237,GO:0044238,GO:0044248,GO:0044249,GO:0044262,GO:0044270,GO:0044271,GO:0044275,GO:0044281,GO:0044282,GO:0044283,GO:0044424,GO:0044444,GO:0044464,GO:0046031,GO:0046034,GO:0046164,GO:0046166,GO:0046174,GO:0046184,GO:0046364,GO:0046390,GO:0046394,GO:0046434,GO:0046483,GO:0046496,GO:0046700,GO:0046939,GO:0051186,GO:0051188,GO:0055086,GO:0071704,GO:0072330,GO:0072521,GO:0072522,GO:0072524,GO:0072525,GO:0090407,GO:1901135,GO:1901137,GO:1901292,GO:1901293,GO:1901360,GO:1901361,GO:1901362,GO:1901564,GO:1901566,GO:1901575,GO:1901576,GO:1901615,GO:1901616 5.3.1.1 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004474 344.0
DYD1_k127_2673030_16 DNA alkylation repair - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006772 343.0
DYD1_k127_2673030_17 Reversible hydration of carbon dioxide K01673 - 4.2.1.1 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004179 317.0
DYD1_k127_2673030_18 Ribosomal protein L11 methyltransferase K02687 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000005188 292.0
DYD1_k127_2673030_19 Catalyzes the phosphorylation of pantothenate (Pan), the first step in CoA biosynthesis K03525 - 2.7.1.33 0.000000000000000000000000000000000000000000000000000000000000000000000000000001098 270.0
DYD1_k127_2673030_2 Aminopeptidase N - - - 5e-324 1006.0
DYD1_k127_2673030_20 HupE / UreJ protein - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000002428 266.0
DYD1_k127_2673030_21 Nitroreductase family - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000002357 251.0
DYD1_k127_2673030_22 Domain of unknown function (DUF4974) - - - 0.000000000000000000000000000000000000000000000000000000000000000004901 237.0
DYD1_k127_2673030_23 RNA polymerase sigma factor, sigma-70 family K03088 - - 0.000000000000000000000000000000000000000000000000000000000003564 213.0
DYD1_k127_2673030_24 pfam abc K05847 - - 0.000000000000000000000000000000000000000000000000000000000006827 214.0
DYD1_k127_2673030_25 Activator of Hsp90 ATPase homolog 1-like protein - - - 0.0000000000000000000000000000000000000000000000000000000002292 204.0
DYD1_k127_2673030_28 Domain of unknown function (DUF427) - - - 0.0000000000000000000000000000000000000000008215 157.0
DYD1_k127_2673030_29 membrane - - - 0.00000000000000000000000000000000000000002878 157.0
DYD1_k127_2673030_3 Aminopeptidase N - - - 2.394e-314 979.0
DYD1_k127_2673030_30 - - - - 0.0000000000000000000000000000001797 128.0
DYD1_k127_2673030_31 Domain of unknown function (DU1801) - - - 0.00000000000000000004066 94.0
DYD1_k127_2673030_33 - - - - 0.00000000011 68.0
DYD1_k127_2673030_4 PFAM TonB-dependent Receptor Plug - - - 1.031e-284 895.0
DYD1_k127_2673030_5 Zn_pept - - - 6.988e-248 781.0
DYD1_k127_2673030_6 STAS domain K03321 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006302 548.0
DYD1_k127_2673030_7 Peptidase family S58 - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008419 460.0
DYD1_k127_2673030_8 permease - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001425 443.0
DYD1_k127_2673030_9 Pyridoxal-phosphate dependent enzyme K01754 - 4.3.1.19 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004266 419.0
DYD1_k127_2687610_0 TonB-dependent Receptor Plug - - - 5e-323 1005.0
DYD1_k127_2687610_1 Aerotolerance regulator N-terminal - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004587 617.0
DYD1_k127_2687610_10 KR domain K08081 - 1.1.1.206 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000006478 294.0
DYD1_k127_2687610_11 Domain of unknown function (DUF4249) - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000001851 279.0
DYD1_k127_2687610_12 Cation efflux family - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000002119 270.0
DYD1_k127_2687610_13 Methyltransferase domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000001854 252.0
DYD1_k127_2687610_14 Excinuclease ABC subunit B - - - 0.00000000000000000000000000000000000000000000000000000000000000000001831 242.0
DYD1_k127_2687610_15 epimerase - - - 0.0000000000000000000000000000000000000000000000000000000000000000001542 235.0
DYD1_k127_2687610_16 rejects L-amino acids rather than detecting D-amino acids in the active site. By recycling D-aminoacyl-tRNA to D-amino acids and free tRNA molecules, this enzyme counteracts the toxicity associated with the formation of D-aminoacyl-tRNA entities in vivo and helps enforce protein L-homochirality K07560 GO:0002161,GO:0003674,GO:0003824,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006139,GO:0006399,GO:0006450,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0009987,GO:0016070,GO:0016787,GO:0016788,GO:0034641,GO:0034660,GO:0043170,GO:0044237,GO:0044238,GO:0044424,GO:0044464,GO:0046483,GO:0051499,GO:0051500,GO:0052689,GO:0065007,GO:0065008,GO:0071704,GO:0090304,GO:0106074,GO:0140098,GO:0140101,GO:1901360 - 0.0000000000000000000000000000000000000000000000000000000000000002654 222.0
DYD1_k127_2687610_17 - - - - 0.0000000000000000000000000000000000000000000000000000000000001233 216.0
DYD1_k127_2687610_18 TIGRFAM DivIVA domain K04074 - - 0.0000000000000000000000000000000000000000000000000000000000006629 217.0
DYD1_k127_2687610_19 Sigma-70, region 4 K03088 - - 0.0000000000000000000000000000000000000000000000000000000002094 207.0
DYD1_k127_2687610_2 Belongs to the ompA family - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001564 611.0
DYD1_k127_2687610_20 Domain of unknown function (DUF4252) - - - 0.0000000000000000000000000000000000000000000000000000005462 198.0
DYD1_k127_2687610_21 COG3653 N-acyl-D-aspartate D-glutamate deacylase K06015 - 3.5.1.81 0.000000000000000000000000000000000000000000000000000009077 193.0
DYD1_k127_2687610_22 Transglutaminase-like superfamily - - - 0.0000000000000000000000000000000000000000000001093 170.0
DYD1_k127_2687610_23 Belongs to the P-Pant transferase superfamily - - - 0.000000000000000000000000000000000000000000000744 173.0
DYD1_k127_2687610_24 Plays an important role in DNA replication, recombination and repair. Binds to ssDNA and to an array of partner proteins to recruit them to their sites of action during DNA metabolism K03111 - - 0.0000000000000000000000000000000000000000000007632 168.0
DYD1_k127_2687610_25 AhpC/TSA family - - - 0.000000000000000000000000000000000000000001185 164.0
DYD1_k127_2687610_26 - - - - 0.0000000000000000000000000000000000000000446 154.0
DYD1_k127_2687610_27 Belongs to the HesB IscA family K13628 - - 0.0000000000000000000000000000000001048 136.0
DYD1_k127_2687610_28 - - - - 0.00000000000000000000000000000000106 136.0
DYD1_k127_2687610_3 Pyridoxal-dependent decarboxylase conserved domain K01593 - 4.1.1.105,4.1.1.28 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003447 592.0
DYD1_k127_2687610_30 Catalyzes the conversion of 7,8-dihydroneopterin to 6- hydroxymethyl-7,8-dihydropterin K01633 - 1.13.11.81,4.1.2.25,5.1.99.8 0.0000000000000000000000000000000531 128.0
DYD1_k127_2687610_31 - - - - 0.000000000000000000000000000002159 126.0
DYD1_k127_2687610_32 Protein of unknown function (DUF4199) - - - 0.000000000000000000000000000004513 126.0
DYD1_k127_2687610_33 Protein of unknown function (DUF1232) - - - 0.000000000000000000004181 98.0
DYD1_k127_2687610_35 Putative prokaryotic signal transducing protein - - - 0.0001924 46.0
DYD1_k127_2687610_4 TIGRFAM dihydroorotase, multifunctional complex type K01465 - 3.5.2.3 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001667 495.0
DYD1_k127_2687610_5 glycosyl transferase family 2 - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001543 462.0
DYD1_k127_2687610_6 AAA domain, putative AbiEii toxin, Type IV TA system K01990 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004142 374.0
DYD1_k127_2687610_7 PFAM WD domain, G-beta repeat - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005238 369.0
DYD1_k127_2687610_8 - - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003145 347.0
DYD1_k127_2687610_9 Arginase family - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001322 331.0
DYD1_k127_2705373_0 helix_turn_helix, arabinose operon control protein - - - 0.0 1024.0
DYD1_k127_2705373_1 COGs COG0604 NADPH quinone reductase and related Zn-dependent oxidoreductase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005609 420.0
DYD1_k127_2705373_2 - - - - 0.00000000000000000000000000000000000000000000000000000000000005022 217.0
DYD1_k127_2705373_3 - - - - 0.000000000000000000000000000000000000000000001085 171.0
DYD1_k127_2705373_4 Toxic component of a toxin-antitoxin (TA) module K07171 - - 0.000000000000000000000000000000000000001034 149.0
DYD1_k127_2705373_5 Transcriptional regulator - - - 0.00000000000000000000004688 100.0
DYD1_k127_2721796_0 Sortilin, neurotensin receptor 3, - - - 0.0 1524.0
DYD1_k127_2721796_1 Belongs to the PEP-utilizing enzyme family K01006 - 2.7.9.1 1.671e-294 916.0
DYD1_k127_2721796_10 Phospholipase_D-nuclease N-terminal - - - 0.00001629 48.0
DYD1_k127_2721796_2 Dihydrolipoamide acetyltransferase component of pyruvate dehydrogenase complex K00658 - 2.3.1.61 1.432e-196 621.0
DYD1_k127_2721796_3 PFAM Cys Met metabolism PLP-dependent enzyme K01739,K01758,K01760 - 2.5.1.48,4.4.1.1,4.4.1.8 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008375 587.0
DYD1_k127_2721796_4 Major facilitator superfamily MFS_1 - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003646 526.0
DYD1_k127_2721796_5 Short-chain dehydrogenase reductase SDR K13774 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002832 476.0
DYD1_k127_2721796_6 Part of the outer membrane protein assembly complex, which is involved in assembly and insertion of beta-barrel proteins into the outer membrane - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001468 479.0
DYD1_k127_2721796_7 OmpA family K02557 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005185 376.0
DYD1_k127_2721796_8 PFAM Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase - - - 0.000000000000000000000000000000005438 144.0
DYD1_k127_2721796_9 - - - - 0.0000000001987 65.0
DYD1_k127_2761402_0 FtsX-like permease family - - - 0.0 1047.0
DYD1_k127_2761402_1 FtsX-like permease family K02004 - - 1.391e-314 986.0
DYD1_k127_2761402_2 Oxidoreductase family, NAD-binding Rossmann fold - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003856 552.0
DYD1_k127_2761402_3 Glycosyl hydrolases family 43 - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000396 531.0
DYD1_k127_2761402_4 D-aminopeptidase K16203 - - 0.000000000000000000000000000000000000000000000000000005985 200.0
DYD1_k127_2761402_5 Ndr family K01259 - 3.4.11.5 0.00000000000000000000000000000000000000000000001902 182.0
DYD1_k127_2761402_6 Transcriptional regulator PadR-like family - - - 0.00000000000000000000000000000000000000000001424 164.0
DYD1_k127_2761402_7 Beta-lactamase class C and other penicillin binding - - - 0.000000000000000000000000000000000000000297 152.0
DYD1_k127_2761402_8 WD40-like Beta Propeller Repeat - - - 0.000000000000000000000004341 113.0
DYD1_k127_2777972_0 Part of the Sec protein translocase complex. Interacts with the SecYEG preprotein conducting channel. Has a central role in coupling the hydrolysis of ATP to the transfer of proteins into and across the cell membrane, serving as an ATP-driven molecular motor driving the stepwise translocation of polypeptide chains across the membrane K03070 GO:0000166,GO:0003674,GO:0003824,GO:0005215,GO:0005488,GO:0005524,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005886,GO:0005887,GO:0006810,GO:0008104,GO:0008144,GO:0008150,GO:0008320,GO:0008565,GO:0015031,GO:0015399,GO:0015405,GO:0015440,GO:0015450,GO:0015462,GO:0015833,GO:0016020,GO:0016021,GO:0016462,GO:0016787,GO:0016817,GO:0016818,GO:0016887,GO:0017076,GO:0017111,GO:0022804,GO:0022857,GO:0022884,GO:0030554,GO:0031224,GO:0031226,GO:0031522,GO:0032553,GO:0032555,GO:0032559,GO:0032991,GO:0033036,GO:0033220,GO:0035639,GO:0036094,GO:0042623,GO:0042626,GO:0042886,GO:0042887,GO:0043167,GO:0043168,GO:0043492,GO:0043952,GO:0044424,GO:0044425,GO:0044444,GO:0044459,GO:0044464,GO:0045184,GO:0051179,GO:0051234,GO:0055085,GO:0071702,GO:0071705,GO:0071806,GO:0071944,GO:0097159,GO:0097367,GO:1901265,GO:1901363,GO:1904680 - 0.0 1729.0
DYD1_k127_2777972_1 PFAM Carbamoyl-phosphate synthase L chain, ATP binding K01955 - 6.3.5.5 0.0 1611.0
DYD1_k127_2777972_10 Cytochrome b5-like Heme/Steroid binding domain - - - 0.000000000000000000000000000000000116 134.0
DYD1_k127_2777972_11 - - - - 0.00000000004353 69.0
DYD1_k127_2777972_12 Diguanylate cyclase - - - 0.00000002879 63.0
DYD1_k127_2777972_2 GTPase that plays an essential role in the late steps of ribosome biogenesis K03977 - - 7.131e-203 638.0
DYD1_k127_2777972_3 Membrane dipeptidase (Peptidase family M19) K01273 - 3.4.13.19 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004822 540.0
DYD1_k127_2777972_4 An essential GTPase that binds both GDP and GTP, with rapid nucleotide exchange. Plays a role in 16S rRNA processing and 30S ribosomal subunit biogenesis and possibly also in cell cycle regulation and energy metabolism K03595 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005758 390.0
DYD1_k127_2777972_5 Specifically catalyzes the cleavage of the D-lactyl ether substituent of MurNAc 6-phosphate, producing GlcNAc 6- phosphate and D-lactate K07106 - 4.2.1.126 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001336 380.0
DYD1_k127_2777972_6 N-acetylglucosamine kinase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009133 315.0
DYD1_k127_2777972_7 Catalyzes the stereoinversion of LL-2,6- diaminoheptanedioate (L,L-DAP) to meso-diaminoheptanedioate (meso- DAP), a precursor of L-lysine and an essential component of the bacterial peptidoglycan K01778 GO:0003674,GO:0003824,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006082,GO:0006520,GO:0006553,GO:0006807,GO:0008150,GO:0008152,GO:0008652,GO:0008837,GO:0009058,GO:0009066,GO:0009067,GO:0009085,GO:0009089,GO:0009987,GO:0016053,GO:0016853,GO:0016854,GO:0016855,GO:0019752,GO:0036361,GO:0043436,GO:0043648,GO:0044237,GO:0044238,GO:0044249,GO:0044281,GO:0044283,GO:0044424,GO:0044444,GO:0044464,GO:0046394,GO:0046451,GO:0047661,GO:0071704,GO:1901564,GO:1901566,GO:1901576,GO:1901605,GO:1901607 5.1.1.7 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000006837 286.0
DYD1_k127_2777972_8 GHKL domain - - - 0.000000000000000000000000000000000000000000000000000007802 202.0
DYD1_k127_2777972_9 PFAM SprT-like family - - - 0.00000000000000000000000000000000000000000000000007567 184.0
DYD1_k127_2784054_0 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002389 456.0
DYD1_k127_2784054_1 Pfam Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001899 467.0
DYD1_k127_2784054_2 Histidine kinase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000516 452.0
DYD1_k127_2784054_3 FIST N domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000167 246.0
DYD1_k127_2790079_0 Histidine kinase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003654 537.0
DYD1_k127_2790079_1 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000001741 288.0
DYD1_k127_2815754_0 Tex-like protein N-terminal domain K06959 - - 3.661e-275 866.0
DYD1_k127_2815754_1 Catalyzes the reversible phosphatidyl group transfer from one phosphatidylglycerol molecule to another to form cardiolipin (CL) (diphosphatidylglycerol) and glycerol K06132 - - 0.000000001593 59.0
DYD1_k127_2816465_0 Alpha-glucosidase K01187,K21574 - 3.2.1.20,3.2.1.3 0.0 1157.0
DYD1_k127_2816465_1 Acyl-CoA dehydrogenase, middle domain K00232 - 1.3.3.6 3.5e-323 1005.0
DYD1_k127_2816465_2 Domain in cystathionine beta-synthase and other proteins. - - - 4.529e-219 695.0
DYD1_k127_2816465_3 Succinylglutamate desuccinylase / Aspartoacylase family K05526 - 3.5.1.96 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002629 388.0
DYD1_k127_2816465_4 COG2755 Lysophospholipase L1 and related - - - 0.000000000000000000000000000000000000000000004935 167.0
DYD1_k127_2816465_5 Nucleic-acid-binding protein containing Zn-ribbon domain (DUF2082) K07069 - - 0.000000000000148 73.0
DYD1_k127_2816465_6 LysR family - - - 0.000000048 55.0
DYD1_k127_2816465_7 Sortilin, neurotensin receptor 3, - - - 0.00000009556 58.0
DYD1_k127_2821300_0 Aerobic-type carbon monoxide dehydrogenase, large subunit CoxL CutL-like protein K07303 - 1.3.99.16 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005543 585.0
DYD1_k127_2821300_1 [2Fe-2S] binding domain K07302 - 1.3.99.16 0.00000000000000000000000000000000000000000000000000000000002012 209.0
DYD1_k127_2821300_2 cAMP biosynthetic process K00870,K12132 - 2.7.1.37,2.7.11.1 0.0000000000000000000000000000000000000000000000000000000009441 226.0
DYD1_k127_2821300_3 DNA lyase K10773 - 4.2.99.18 0.0000000000000000000001656 98.0
DYD1_k127_2847592_0 DNA ligase that catalyzes the formation of phosphodiester linkages between 5'-phosphoryl and 3'-hydroxyl groups in double-stranded DNA using NAD as a coenzyme and as the energy source for the reaction. It is essential for DNA replication and repair of damaged DNA K01972 GO:0003674,GO:0003824,GO:0003909,GO:0003911,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006139,GO:0006259,GO:0006266,GO:0006281,GO:0006284,GO:0006288,GO:0006725,GO:0006807,GO:0006950,GO:0006974,GO:0008150,GO:0008152,GO:0009987,GO:0016874,GO:0016886,GO:0033554,GO:0034641,GO:0043170,GO:0044237,GO:0044238,GO:0044260,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0050896,GO:0051103,GO:0051716,GO:0071704,GO:0090304,GO:0140097,GO:1901360 6.5.1.2 2.411e-287 895.0
DYD1_k127_2847592_1 PFAM Carbamoyl-phosphate synthase L chain, ATP binding K01961,K01965 - 6.3.4.14,6.4.1.2,6.4.1.3 1.642e-234 733.0
DYD1_k127_2847592_11 - - - - 0.00000000000000000000000000000000000000000000003574 175.0
DYD1_k127_2847592_12 Maf-like protein K06287 - - 0.000000000000000000000000000000000002721 145.0
DYD1_k127_2847592_13 Acyl CoA binding protein - - - 0.000000000000000000000000009486 111.0
DYD1_k127_2847592_14 histone H1-like protein - - - 0.000000000000000000003472 93.0
DYD1_k127_2847592_2 Belongs to the citrate synthase family K01647 - 2.3.3.1 4.506e-226 705.0
DYD1_k127_2847592_3 PFAM Aminotransferase class I and II K00639 - 2.3.1.29 8.313e-219 685.0
DYD1_k127_2847592_4 Protein of unknown function (DUF1015) - - - 2.555e-213 668.0
DYD1_k127_2847592_5 Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family K02005 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001513 400.0
DYD1_k127_2847592_6 PFAM Glycosyl transferases group 1 - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007754 389.0
DYD1_k127_2847592_7 PFAM SPFH domain Band 7 family - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001151 360.0
DYD1_k127_2847592_8 Catalyzes the condensation of (S)-aspartate-beta- semialdehyde (S)-ASA and pyruvate to 4-hydroxy- tetrahydrodipicolinate (HTPA) K01714 - 4.3.3.7 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006665 360.0
DYD1_k127_2847592_9 Specifically methylates the N3 position of the uracil ring of uridine 1498 (m3U1498) in 16S rRNA. Acts on the fully assembled 30S ribosomal subunit K09761 - 2.1.1.193 0.00000000000000000000000000000000000000000000000000000000000000000000001029 248.0
DYD1_k127_2912005_0 cellulose binding - - - 0.0 1257.0
DYD1_k127_2912005_1 Peptidase, S9A B C family, catalytic domain protein - GO:0003674,GO:0003824,GO:0004177,GO:0005488,GO:0005515,GO:0005575,GO:0005623,GO:0006508,GO:0006518,GO:0006807,GO:0008150,GO:0008152,GO:0008233,GO:0008238,GO:0008239,GO:0009056,GO:0009987,GO:0016787,GO:0019538,GO:0033218,GO:0034641,GO:0042277,GO:0042597,GO:0042802,GO:0042803,GO:0043170,GO:0043171,GO:0043603,GO:0044237,GO:0044238,GO:0044248,GO:0044464,GO:0046983,GO:0070011,GO:0071704,GO:0140096,GO:1901564,GO:1901565,GO:1901575 - 1.122e-284 886.0
DYD1_k127_2912005_10 EamA-like transporter family - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001584 310.0
DYD1_k127_2912005_11 Fructosamine kinase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000001791 277.0
DYD1_k127_2912005_12 TAP-like protein - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000006342 284.0
DYD1_k127_2912005_13 Redoxin - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000002565 252.0
DYD1_k127_2912005_14 YCII-related domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000006708 245.0
DYD1_k127_2912005_15 - - - - 0.00000000000000000000000000000000000000000000000000000000000000001568 230.0
DYD1_k127_2912005_16 Involved in the tonB-independent uptake of proteins - - - 0.000000000000000000000000000000000000000000000000000003708 201.0
DYD1_k127_2912005_17 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily - - - 0.00000000000000000000000000000000000000000000000317 176.0
DYD1_k127_2912005_18 Putative PepSY_TM-like K09939 - - 0.00000000000000000000000000000000000000000000005429 174.0
DYD1_k127_2912005_19 COGs COG5616 integral membrane protein - - - 0.0000000000000000000000000000000000000000000004353 190.0
DYD1_k127_2912005_2 PFAM GH3 auxin-responsive promoter - - - 5.24e-256 796.0
DYD1_k127_2912005_20 Thioredoxin - - - 0.000000000000000000000000000000000000000000003316 169.0
DYD1_k127_2912005_21 TfoX N-terminal domain - - - 0.00000000000000000000000000003213 120.0
DYD1_k127_2912005_22 SnoaL-like domain - - - 0.000000000000000000008143 96.0
DYD1_k127_2912005_23 peptidase K01303 - 3.4.19.1 0.00000000000004732 86.0
DYD1_k127_2912005_25 - - - - 0.000683 49.0
DYD1_k127_2912005_3 single-stranded-DNA-specific exonuclease RecJ K07462 - - 1.678e-211 670.0
DYD1_k127_2912005_4 Aminotransferase class-V - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005534 503.0
DYD1_k127_2912005_5 Pyridine nucleotide-disulphide oxidoreductase K00384 - 1.8.1.9 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006988 491.0
DYD1_k127_2912005_6 Peptidase family M20/M25/M40 K06016 - 3.5.1.6,3.5.1.87 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000334 492.0
DYD1_k127_2912005_7 Nitronate monooxygenase K02371 - 1.3.1.9 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000512 448.0
DYD1_k127_2912005_8 ABC transporter K06861 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001413 402.0
DYD1_k127_2912005_9 converts alpha-aldose to the beta-anomer - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006923 328.0
DYD1_k127_2922433_0 Beta-lactamase class C and other penicillin binding - - - 2.541e-275 861.0
DYD1_k127_2922433_1 TonB-dependent receptor - - - 4.771e-262 824.0
DYD1_k127_2922433_10 - Catabolite gene activator and regulatory subunit of cAMP-dependent protein - - - 0.000000000000000000000000000000005166 135.0
DYD1_k127_2922433_11 Sensors of blue-light using FAD - - - 0.0000000000000000000001661 102.0
DYD1_k127_2922433_13 COG0604 NADPH quinone reductase and related Zn-dependent - - - 0.0002009 46.0
DYD1_k127_2922433_2 MacB-like periplasmic core domain K02004 - - 7.238e-222 712.0
DYD1_k127_2922433_3 RibD C-terminal domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000246 274.0
DYD1_k127_2922433_4 Cupin 2, conserved barrel domain protein - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000001114 276.0
DYD1_k127_2922433_5 - - - - 0.000000000000000000000000000000000000000000000000000000000000002214 224.0
DYD1_k127_2922433_6 Interacts with outer membrane receptor proteins that carry out high-affinity binding and energy dependent uptake into the periplasmic space of specific substrates. It could act to transduce energy from the cytoplasmic membrane to specific energy- requiring processes in the outer membrane, resulting in the release into the periplasm of ligands bound by these outer membrane proteins K03832 - - 0.000000000000000000000000000000000000000000000000000000000000008316 222.0
DYD1_k127_2922433_8 Activator of Hsp90 ATPase homolog 1-like protein - - - 0.0000000000000000000000000000000000000000000000000000000001392 207.0
DYD1_k127_2922433_9 - - - - 0.00000000000000000000000000000000000000004863 155.0
DYD1_k127_2948436_0 Phosphoglucomutase phosphomannomutase alpha beta alpha domain I K01835 - 5.4.2.2 3.968e-217 687.0
DYD1_k127_2948436_1 PFAM Glyoxalase bleomycin resistance protein dioxygenase K00457 - 1.13.11.27 2.818e-195 613.0
DYD1_k127_2948436_2 - - - - 0.0000000000000000000000000000000000000000000000002027 179.0
DYD1_k127_2948436_3 Protein of unknown function (DUF1572) - - - 0.00000000000000000000000000000000000000003411 155.0
DYD1_k127_2948436_4 - - - - 0.0000000000000000000000000000000124 130.0
DYD1_k127_298339_0 ABC transporter transmembrane region K11085 - - 6.792e-248 777.0
DYD1_k127_298339_1 TonB-dependent Receptor Plug - - - 1.557e-247 788.0
DYD1_k127_298339_10 Homoserine dehydrogenase K00003 - 1.1.1.3 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002887 357.0
DYD1_k127_298339_11 OST-HTH/LOTUS domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005485 350.0
DYD1_k127_298339_12 Calcineurin-like phosphoesterase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003789 342.0
DYD1_k127_298339_13 Gamma-glutamyltranspeptidase K00681 - 2.3.2.2,3.4.19.13 0.0000000000000000000000000000000000000000000000000000000000000000000000000000003196 284.0
DYD1_k127_298339_14 Glyoxalase-like domain - - - 0.000000000000000000000000000000000000000000000000000001717 194.0
DYD1_k127_298339_15 - - - - 0.00000000000000000000000000000000000000000000000000002818 199.0
DYD1_k127_298339_16 negative regulation of transcription, DNA-templated - - - 0.0000000000000000000000000000000000000156 150.0
DYD1_k127_298339_17 - - - - 0.00000000000000000000000000000000000004456 146.0
DYD1_k127_298339_18 Domain of unknown function (DUF3817) - - - 0.000000000000000000000000000001295 123.0
DYD1_k127_298339_19 Transcriptional regulator - GO:0006355,GO:0008150,GO:0009889,GO:0009891,GO:0009893,GO:0010468,GO:0010556,GO:0010557,GO:0010604,GO:0010628,GO:0019219,GO:0019222,GO:0030260,GO:0031323,GO:0031325,GO:0031326,GO:0031328,GO:0044403,GO:0044409,GO:0044419,GO:0045893,GO:0045935,GO:0048518,GO:0048522,GO:0050789,GO:0050794,GO:0051171,GO:0051173,GO:0051252,GO:0051254,GO:0051701,GO:0051704,GO:0051806,GO:0051828,GO:0060255,GO:0065007,GO:0080090,GO:1902680,GO:1903506,GO:1903508,GO:2000112,GO:2001141 - 0.00000000000000000000000001984 111.0
DYD1_k127_298339_2 Glycogen debranching enzyme, glucanotransferase domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005608 612.0
DYD1_k127_298339_20 - - - - 0.0000000000000000006234 92.0
DYD1_k127_298339_3 Aminotransferase class-V - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001334 608.0
DYD1_k127_298339_4 TIGRFAM cysteine desulfurase family protein, VC1184 subfamily - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004916 504.0
DYD1_k127_298339_5 - - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004715 483.0
DYD1_k127_298339_6 PFAM CBS domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003495 451.0
DYD1_k127_298339_7 Predicted membrane protein (DUF2254) - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000112 449.0
DYD1_k127_298339_8 Putative esterase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005114 383.0
DYD1_k127_298339_9 Methyltransferase FkbM domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001059 363.0
DYD1_k127_2991314_0 Belongs to the UPF0403 family - - - 0.000000000000000000000000000000000000000000000000000000000000000000002637 236.0
DYD1_k127_2991314_1 SufE protein probably involved in Fe-S center assembly K02426 - - 0.00000000000000000000000000000000000000000000000000000000000168 212.0
DYD1_k127_2991314_2 Sodium/hydrogen exchanger family K03316 - - 0.000000000000000000000000000000000000000000000000000005168 198.0
DYD1_k127_2991314_3 FeS assembly SUF system protein - - - 0.0000000000000000000000000000000000000000000000001651 178.0
DYD1_k127_299745_0 ABC-type uncharacterized transport system - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002917 537.0
DYD1_k127_299745_1 ATPases associated with a variety of cellular activities K01990 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001953 439.0
DYD1_k127_299745_2 ABC-2 family transporter protein K01992 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001031 312.0
DYD1_k127_299745_3 - - - - 0.000000000000000000000000000000000000000000000000002969 189.0
DYD1_k127_299745_4 - - - - 0.00000000000000000000000000000000000000000000000002383 189.0
DYD1_k127_299745_5 Domain of unknown function (DUF4340) - - - 0.00000000000000000000000000000004851 137.0
DYD1_k127_299745_6 Haemolytic - - - 0.0000000003705 66.0
DYD1_k127_3001792_0 Belongs to the type II topoisomerase GyrA ParC subunit family K02621 - - 0.0 1270.0
DYD1_k127_3001792_1 CarboxypepD_reg-like domain - - - 0.0 1064.0
DYD1_k127_3001792_10 3-hydroxyacyl-CoA dehydrogenase K00074 - 1.1.1.157 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006261 453.0
DYD1_k127_3001792_11 Belongs to the transferase hexapeptide repeat family K00674 - 2.3.1.117 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000257 443.0
DYD1_k127_3001792_12 molecular chaperone K03686,K05516 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001595 430.0
DYD1_k127_3001792_13 cellular modified histidine biosynthetic process K18802 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001543 318.0
DYD1_k127_3001792_14 Has lipid A 3-O-deacylase activity. Hydrolyzes the ester bond at the 3 position of lipid A, a bioactive component of lipopolysaccharide (LPS), thereby releasing the primary fatty acyl moiety - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000005468 302.0
DYD1_k127_3001792_15 Protein of unknown function (DUF3108) - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000002187 300.0
DYD1_k127_3001792_16 Iron dependent repressor, metal binding and dimerisation domain K03709 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000006604 278.0
DYD1_k127_3001792_17 IF-3 binds to the 30S ribosomal subunit and shifts the equilibrum between 70S ribosomes and their 50S and 30S subunits in favor of the free subunits, thus enhancing the availability of 30S subunits on which protein synthesis initiation begins K02520 GO:0003674,GO:0003676,GO:0003723,GO:0003743,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006412,GO:0006413,GO:0006518,GO:0006807,GO:0006996,GO:0008135,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0016020,GO:0016043,GO:0019538,GO:0022411,GO:0032790,GO:0032984,GO:0032988,GO:0034641,GO:0034645,GO:0043021,GO:0043022,GO:0043043,GO:0043170,GO:0043603,GO:0043604,GO:0043933,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044424,GO:0044444,GO:0044464,GO:0044877,GO:0071704,GO:0071826,GO:0071840,GO:0097159,GO:1901363,GO:1901564,GO:1901566,GO:1901576,GO:1903008 - 0.000000000000000000000000000000000000000000000000000000000000000000000000000002218 265.0
DYD1_k127_3001792_18 PFAM Glycosyl transferases group 1 - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000009575 261.0
DYD1_k127_3001792_19 Catalyzes the 2'-O methylation of guanosine at position 18 in tRNA K00556 - 2.1.1.34 0.0000000000000000000000000000000000000000000000000000000000000000000001201 246.0
DYD1_k127_3001792_2 Catalyzes the attachment of threonine to tRNA(Thr) in a two-step reaction L-threonine is first activated by ATP to form Thr-AMP and then transferred to the acceptor end of tRNA(Thr) K01868 GO:0003674,GO:0003824,GO:0004812,GO:0004829,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006082,GO:0006139,GO:0006399,GO:0006412,GO:0006418,GO:0006435,GO:0006518,GO:0006520,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0016070,GO:0016874,GO:0016875,GO:0019538,GO:0019752,GO:0034641,GO:0034645,GO:0034660,GO:0043038,GO:0043039,GO:0043043,GO:0043170,GO:0043436,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044281,GO:0044424,GO:0044464,GO:0046483,GO:0071704,GO:0090304,GO:0140098,GO:0140101,GO:1901360,GO:1901564,GO:1901566,GO:1901576 6.1.1.3 0.0 1058.0
DYD1_k127_3001792_20 DUF218 domain K03748 - - 0.000000000000000000000000000000000000000000000000000000000000000000004694 241.0
DYD1_k127_3001792_21 peptide methionine sulfoxide reductase K07305 - 1.8.4.12 0.000000000000000000000000000000000000000000000000000000000000001138 222.0
DYD1_k127_3001792_22 Binds directly to 23S ribosomal RNA and is necessary for the in vitro assembly process of the 50S ribosomal subunit. It is not involved in the protein synthesizing functions of that subunit K02887 GO:0000027,GO:0003674,GO:0003735,GO:0005198,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0006996,GO:0008150,GO:0009987,GO:0015934,GO:0016043,GO:0022607,GO:0022613,GO:0022618,GO:0022625,GO:0022626,GO:0032991,GO:0034622,GO:0042254,GO:0042255,GO:0042273,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043933,GO:0044085,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:0065003,GO:0070925,GO:0071826,GO:0071840,GO:1990904 - 0.00000000000000000000000000000000000000000000000000000007312 196.0
DYD1_k127_3001792_23 Belongs to the UPF0312 family - - - 0.00000000000000000000000000000000000000000000005665 174.0
DYD1_k127_3001792_24 mechanosensitive ion channel activity K03282 GO:0003674,GO:0005215,GO:0005216,GO:0005488,GO:0005515,GO:0005575,GO:0005623,GO:0005886,GO:0005887,GO:0006810,GO:0006811,GO:0006884,GO:0008150,GO:0008361,GO:0008381,GO:0009987,GO:0009992,GO:0015075,GO:0015267,GO:0015318,GO:0016020,GO:0016021,GO:0016043,GO:0019725,GO:0022803,GO:0022836,GO:0022838,GO:0022857,GO:0030104,GO:0031224,GO:0031226,GO:0032535,GO:0034220,GO:0042592,GO:0042802,GO:0044425,GO:0044459,GO:0044464,GO:0048878,GO:0051179,GO:0051234,GO:0055082,GO:0055085,GO:0065007,GO:0065008,GO:0071840,GO:0071944,GO:0090066 - 0.000000000000000000000000000000000000001151 150.0
DYD1_k127_3001792_25 - - - - 0.0000000000000000000000001504 113.0
DYD1_k127_3001792_26 - - - - 0.0000000000000000000000003852 111.0
DYD1_k127_3001792_27 MerR HTH family regulatory protein - - - 0.0000000000000000000005397 98.0
DYD1_k127_3001792_28 - - - - 0.0000000000000000000008328 100.0
DYD1_k127_3001792_3 Type IIA topoisomerase (DNA gyrase topo II topoisomerase IV) B subunit K02622 - - 0.0 1015.0
DYD1_k127_3001792_30 redox protein, regulator of disulfide bond formation K07397 - - 0.00000000000000000009725 94.0
DYD1_k127_3001792_31 Belongs to the bacterial ribosomal protein bL35 family K02916 GO:0003674,GO:0003735,GO:0005198,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0015934,GO:0022625,GO:0022626,GO:0032991,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:1990904 - 0.00000000000000000531 85.0
DYD1_k127_3001792_32 Cytochrome c - - - 0.0000000000000005848 82.0
DYD1_k127_3001792_34 - - - - 0.0000000255 57.0
DYD1_k127_3001792_4 H( )-stimulated, divalent metal cation uptake system K03322 - - 3.568e-199 631.0
DYD1_k127_3001792_5 Catalyzes the formation of L-homocysteine from O- succinyl-L-homoserine (OSHS) and hydrogen sulfide K10764 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002298 607.0
DYD1_k127_3001792_6 PFAM FAD dependent oxidoreductase K15736 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001456 604.0
DYD1_k127_3001792_7 PFAM Fatty acid hydroxylase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006043 513.0
DYD1_k127_3001792_8 Belongs to the sodium solute symporter (SSF) (TC 2.A.21) family K03307,K14387 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007399 492.0
DYD1_k127_3001792_9 MoeZ MoeB domain K21029,K21147 - 2.7.7.80,2.8.1.11 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007753 459.0
DYD1_k127_302373_0 Specifically catalyzes the decarboxylation of meso- diaminopimelate (meso-DAP) to L-lysine K01586 - 4.1.1.20 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003774 595.0
DYD1_k127_302373_1 Catalyzes the formation of S-adenosylmethionine (AdoMet) from methionine and ATP. The overall synthetic reaction is composed of two sequential steps, AdoMet formation and the subsequent tripolyphosphate hydrolysis which occurs prior to release of AdoMet from the enzyme K00789 GO:0003674,GO:0003824,GO:0004478,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0016740,GO:0016765,GO:0044424,GO:0044444,GO:0044464 2.5.1.6 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002705 586.0
DYD1_k127_302373_2 TIGRFAM flavoprotein, HI0933 family K07007 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008639 461.0
DYD1_k127_302373_3 Serine aminopeptidase, S33 - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000002867 301.0
DYD1_k127_302373_4 PFAM Tetrapyrrole (Corrin Porphyrin) Methylases K07056 - 2.1.1.198 0.000000000000000000000000000000000000000000000000000000000000000000000000000219 262.0
DYD1_k127_302373_5 GIY-YIG catalytic domain K07461 - - 0.0000000000000000006181 90.0
DYD1_k127_3024141_0 Peptidase dimerisation domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001734 528.0
DYD1_k127_3024141_1 PFAM Glycosyl transferase family 2 - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002311 325.0
DYD1_k127_3024141_2 COG1473 Metal-dependent amidase aminoacylase carboxypeptidase K01436 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000005933 269.0
DYD1_k127_3024141_3 chlorophyll binding - - - 0.00000000000000000000000000000000000000000000000000000000000005476 229.0
DYD1_k127_3024141_4 SET (Su(var)3-9, Enhancer-of-zeste, Trithorax) domain K07117 - - 0.000000000000000000000000000000000001191 142.0
DYD1_k127_3024141_5 Histone-like DNA-binding protein which is capable of wrapping DNA to stabilize it, and thus to prevent its denaturation under extreme environmental conditions K03530 - - 0.00000000000000000000000000000000677 129.0
DYD1_k127_3024141_6 - - - - 0.00000000000006975 78.0
DYD1_k127_3026267_0 manually curated - - - 0.000000000000000000000000000005019 120.0
DYD1_k127_3026267_1 YceI-like domain - - - 0.000000000000000000000255 109.0
DYD1_k127_3027994_0 FtsX-like permease family - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004067 486.0
DYD1_k127_3027994_1 Glycosyl transferase family 2 - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000611 389.0
DYD1_k127_3027994_2 tRNA-(MS[2]IO[6]A)-hydroxylase (MiaE) K06169 - - 0.0000000000000000000000000000000000000000000000000000000000000004496 221.0
DYD1_k127_3027994_3 Transcriptional regulator PadR-like family - - - 0.00000000000000000000000001051 111.0
DYD1_k127_3027994_4 Glycosyl transferase, family 2 - - - 0.0000000000000000000000003072 115.0
DYD1_k127_3031674_0 Outer membrane protein beta-barrel family - - - 3.712e-270 859.0
DYD1_k127_3031674_1 efflux transmembrane transporter activity K02004 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007688 443.0
DYD1_k127_3031674_2 PFAM Glycerophosphoryl diester phosphodiesterase K01126 - 3.1.4.46 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007264 360.0
DYD1_k127_3031674_3 His Kinase A (phosphoacceptor) domain K07636 - 2.7.13.3 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000403 299.0
DYD1_k127_3031674_4 Transcriptional regulatory protein, C terminal - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000002093 272.0
DYD1_k127_3031674_5 Protein of unknown function (Porph_ging) - - - 0.000000000000000000000000000000000000000000000000000000000000001435 226.0
DYD1_k127_3031674_6 Belongs to the carbohydrate kinase PfkB family - - - 0.000000000000000000000000000000000000000000000000000006648 192.0
DYD1_k127_3031674_7 - - - - 0.0000000000000000000000000009376 116.0
DYD1_k127_3053999_0 ABC-type transport system involved in lipoprotein release permease component K09808 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004145 345.0
DYD1_k127_3053999_1 ABC-type transport system involved in lipoprotein release permease component K09808 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000001302 295.0
DYD1_k127_3053999_2 Part of the ABC transporter complex LolCDE involved in the translocation of K09810 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000001278 271.0
DYD1_k127_3053999_3 Barrel-sandwich domain of CusB or HlyD membrane-fusion K02005 - - 0.00000000000000000000000000000000000000000000000000000000000000000004466 234.0
DYD1_k127_306688_0 Nitrilase cyanide hydratase and apolipoprotein N-acyltransferase - - - 1.714e-236 741.0
DYD1_k127_306688_1 Na( ) H( ) antiporter that extrudes sodium in exchange for external protons K03313 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008549 527.0
DYD1_k127_306688_2 Mechanosensitive ion channel - - - 0.00000000000000000000000000000000000000000000000000000000000000000000009135 247.0
DYD1_k127_306688_3 - - - - 0.000000000000000000000000116 118.0
DYD1_k127_3070890_0 His Kinase A (phosphoacceptor) domain - - - 2.028e-217 691.0
DYD1_k127_3070890_1 cell adhesion involved in biofilm formation - - - 6.591e-194 653.0
DYD1_k127_3070890_2 Sigma-54 interaction domain - - - 0.00000000004286 63.0
DYD1_k127_308482_0 ABC-2 type transporter - - - 0.0 1190.0
DYD1_k127_308482_1 Catalyzes the attachment of tyrosine to tRNA(Tyr) in a two-step reaction tyrosine is first activated by ATP to form Tyr- AMP and then transferred to the acceptor end of tRNA(Tyr) K01866 GO:0003674,GO:0003824,GO:0004812,GO:0004831,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006082,GO:0006139,GO:0006399,GO:0006520,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0009987,GO:0016070,GO:0016874,GO:0016875,GO:0019752,GO:0034641,GO:0034660,GO:0043038,GO:0043039,GO:0043170,GO:0043436,GO:0044237,GO:0044238,GO:0044281,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0071704,GO:0090304,GO:0140098,GO:0140101,GO:1901360,GO:1901564 6.1.1.1 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008391 610.0
DYD1_k127_308482_10 PFAM MotA TolQ ExbB proton channel K03561 - - 0.00000000000001031 73.0
DYD1_k127_308482_11 - - - - 0.000000000661 61.0
DYD1_k127_308482_2 Belongs to the peptidase S41A family K03797 - 3.4.21.102 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006733 417.0
DYD1_k127_308482_3 Belongs to the peptidase S41A family K03797 - 3.4.21.102 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003672 403.0
DYD1_k127_308482_4 TPM domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002076 335.0
DYD1_k127_308482_5 TraB family K09973 - - 0.00000000000000000000000000000000000000000000000000000000000000000112 237.0
DYD1_k127_308482_6 PFAM Phosphoribosyl-ATP pyrophosphohydrolase - - - 0.000000000000000000000000000000000000000000000000000000000000000003734 229.0
DYD1_k127_308482_7 Tfp pilus assembly protein FimV - - - 0.00000000000000000000000000000000000000000000000000000000006639 214.0
DYD1_k127_308482_8 Biopolymer transport protein ExbD TolR K03559 - - 0.0000000000000000000000000000000000000000000002515 170.0
DYD1_k127_3102118_0 - Catabolite gene activator and regulatory subunit of cAMP-dependent protein - - - 0.0 1056.0
DYD1_k127_3102118_1 WD40 repeats - - - 0.0 1028.0
DYD1_k127_3102118_10 Binds to Cpn60 in the presence of Mg-ATP and suppresses the ATPase activity of the latter K04078 GO:0003674,GO:0005488,GO:0005515,GO:0006457,GO:0006458,GO:0006950,GO:0006986,GO:0008150,GO:0009987,GO:0010033,GO:0035966,GO:0042221,GO:0043167,GO:0043169,GO:0046872,GO:0050896,GO:0051082,GO:0051084,GO:0051085,GO:0051087,GO:0061077 - 0.0000000000000000000000000000000000000008661 149.0
DYD1_k127_3102118_11 Fibronectin type 3 domain - - - 0.000000000000000000000000000000000000007476 169.0
DYD1_k127_3102118_12 Lipopolysaccharide-assembly - - - 0.0000000000000000000000000000000000002542 146.0
DYD1_k127_3102118_13 Outer membrane protein beta-barrel domain - - - 0.0000000000000000000000000006225 126.0
DYD1_k127_3102118_14 PFAM Preprotein translocase SecG subunit K03075 - - 0.000000000000000000000000001809 114.0
DYD1_k127_3102118_15 - - - - 0.0000000000000000000000000612 119.0
DYD1_k127_3102118_16 TIGRFAM Por secretion system C-terminal sorting domain - - - 0.0001033 54.0
DYD1_k127_3102118_2 Catalyzes the methylthiolation of N6- (dimethylallyl)adenosine (i(6)A), leading to the formation of 2- methylthio-N6-(dimethylallyl)adenosine (ms(2)i(6)A) at position 37 in tRNAs that read codons beginning with uridine K06168 - 2.8.4.3 8.924e-241 751.0
DYD1_k127_3102118_3 sigma54 specific, transcriptional regulator, Fis family - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001033 611.0
DYD1_k127_3102118_4 Prevents misfolding and promotes the refolding and proper assembly of unfolded polypeptides generated under stress conditions K04077 GO:0003674,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006457,GO:0006458,GO:0008150,GO:0009987,GO:0016465,GO:0032991,GO:0044183,GO:0044424,GO:0044444,GO:0044445,GO:0044464,GO:0051082,GO:0061077,GO:0101031,GO:1990220 - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003046 565.0
DYD1_k127_3102118_5 Peptidase, M28 - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002211 510.0
DYD1_k127_3102118_6 carbonic anhydrase acetyltransferase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000108 271.0
DYD1_k127_3102118_7 - - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000003938 261.0
DYD1_k127_3102118_8 PFAM Outer membrane chaperone Skp (OmpH) K06142 - - 0.0000000000000000000000000000000000000000000000000003723 192.0
DYD1_k127_3102118_9 alginic acid biosynthetic process K20274 - - 0.00000000000000000000000000000000000000000009061 185.0
DYD1_k127_310625_0 Zn-dependent protease with chaperone function K03799,K06013 - 3.4.24.84 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004156 560.0
DYD1_k127_310625_1 argininosuccinate lyase K01755 GO:0003674,GO:0003824,GO:0004056,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006082,GO:0006520,GO:0006525,GO:0006526,GO:0006591,GO:0006807,GO:0008150,GO:0008152,GO:0008652,GO:0009058,GO:0009064,GO:0009084,GO:0009987,GO:0016053,GO:0016829,GO:0016840,GO:0016842,GO:0019752,GO:0042450,GO:0043436,GO:0044237,GO:0044238,GO:0044249,GO:0044281,GO:0044283,GO:0044424,GO:0044464,GO:0046394,GO:0071704,GO:1901564,GO:1901566,GO:1901576,GO:1901605,GO:1901607 4.3.2.1 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000243 468.0
DYD1_k127_310625_10 - - - - 0.00000000000000000003869 98.0
DYD1_k127_310625_11 Belongs to the adenylyl cyclase class-4 guanylyl cyclase family K01768 - 4.6.1.1 0.0000000000000003099 79.0
DYD1_k127_310625_12 - - - - 0.00005647 50.0
DYD1_k127_310625_13 - - - - 0.0004499 51.0
DYD1_k127_310625_2 helix_turn_helix, arabinose operon control protein - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000288 386.0
DYD1_k127_310625_3 Conserved TM helix K03442 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004498 364.0
DYD1_k127_310625_4 - - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007272 306.0
DYD1_k127_310625_5 - - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000005558 273.0
DYD1_k127_310625_6 belongs to the thioredoxin family - - - 0.0000000000000000000000000000000000000000000000000000000000007022 222.0
DYD1_k127_310625_7 TIGRFAM RNA polymerase sigma factor, sigma-70 family K03088 - - 0.00000000000000000000000000000000000000000000000000000000001446 211.0
DYD1_k127_310625_8 HEAT repeats - - - 0.0000000000000000000000000000000000000000000000000000000004409 211.0
DYD1_k127_310625_9 PDZ domain (Also known as DHR or GLGF) - - - 0.0000000000000000000000000000002269 138.0
DYD1_k127_3132235_0 PFAM Adenylate and Guanylate cyclase catalytic domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001782 390.0
DYD1_k127_3132235_1 Pkd domain containing protein - - - 0.0000205 50.0
DYD1_k127_3142001_0 Belongs to the iron ascorbate-dependent oxidoreductase family - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003327 515.0
DYD1_k127_3142001_1 TIGRFAM chromate transporter, chromate ion transporter (CHR) family K07240 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001271 491.0
DYD1_k127_3142001_10 - - - - 0.00000000000000000000008488 103.0
DYD1_k127_3142001_2 Converts 2,5-diamino-6-(ribosylamino)-4(3h)-pyrimidinone 5'-phosphate into 5-amino-6-(ribosylamino)-2,4(1h,3h)- pyrimidinedione 5'-phosphate K11752 - 1.1.1.193,3.5.4.26 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004323 442.0
DYD1_k127_3142001_3 Pyruvate 2-oxoglutarate dehydrogenase complex, dehydrogenase component beta subunit K11381 - 1.2.4.4 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001844 389.0
DYD1_k127_3142001_4 Interacts with outer membrane receptor proteins that carry out high-affinity binding and energy dependent uptake into the periplasmic space of specific substrates. It could act to transduce energy from the cytoplasmic membrane to specific energy- requiring processes in the outer membrane, resulting in the release into the periplasm of ligands bound by these outer membrane proteins K03832 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004217 313.0
DYD1_k127_3142001_5 - - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000002909 289.0
DYD1_k127_3142001_6 Methylates the class 1 translation termination release factors RF1 PrfA and RF2 PrfB on the glutamine residue of the universally conserved GGQ motif K02493 GO:0003674,GO:0003824,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0008150,GO:0008152,GO:0008168,GO:0008757,GO:0016740,GO:0016741,GO:0032259,GO:0044424,GO:0044444,GO:0044464 2.1.1.297 0.000000000000000000000000000000000000000000000000000000000000000000001545 246.0
DYD1_k127_3142001_8 PFAM Short-chain dehydrogenase reductase SDR - - - 0.0000000000000000000000000000000000000000000000000000000000005 214.0
DYD1_k127_3142001_9 TIGRFAM bacillithiol system protein YtxJ - - - 0.000000000000000000000000000000000001433 141.0
DYD1_k127_3171069_0 PKD domain - - - 3.441e-204 667.0
DYD1_k127_3171069_1 MacB-like periplasmic core domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000019 477.0
DYD1_k127_3171069_2 Endonuclease Exonuclease Phosphatase - - - 0.000000002938 71.0
DYD1_k127_3195506_0 FtsX-like permease family K02004 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001247 516.0
DYD1_k127_3195506_1 Aldo/keto reductase family - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003039 364.0
DYD1_k127_3195506_2 ATP ADP translocase K03301 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001513 337.0
DYD1_k127_3195506_3 helix_turn_helix, arabinose operon control protein - - - 0.000000000000000000000000000000000000000000000000000001541 204.0
DYD1_k127_3195506_4 DoxX-like family - - - 0.000000000000000000000000000000000008333 139.0
DYD1_k127_3195506_5 Transcriptional regulator PadR-like family - - - 0.00000000000000000000000000001129 122.0
DYD1_k127_3195506_6 Four helix bundle sensory module for signal transduction - - - 0.0000000000000000000000004412 113.0
DYD1_k127_3205026_0 cyanophycin synthetase K03802 - 6.3.2.29,6.3.2.30 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002883 465.0
DYD1_k127_3205026_1 PFAM Outer membrane efflux protein K12340 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000236 419.0
DYD1_k127_3205026_2 Serine dehydratase K01752 - 4.3.1.17 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005127 339.0
DYD1_k127_3205026_3 PFAM SMP-30 Gluconolaconase - - - 0.000000000000000000000000000000000000000000000002663 200.0
DYD1_k127_3205026_4 Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family K02005 - - 0.00000000000000000000000000000000000000001447 156.0
DYD1_k127_3205026_5 domain, Protein - - - 0.0000000000000000000000000000000000004949 163.0
DYD1_k127_3205026_6 YceI-like domain - - - 0.0000000000000000000000000000227 138.0
DYD1_k127_3209214_0 TonB dependent receptor - - - 3.913e-299 949.0
DYD1_k127_3209214_1 Concanavalin A-like lectin/glucanases superfamily - - - 6.803e-274 876.0
DYD1_k127_3209214_10 AAA domain K07028 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003488 351.0
DYD1_k127_3209214_11 isomerase - - - 0.0000000000000000000000000000000000000000000000000000000000000000003134 233.0
DYD1_k127_3209214_12 Concanavalin A-like lectin/glucanases superfamily - - - 0.000000000000000000000000000000000000000000000000000000000000003668 230.0
DYD1_k127_3209214_13 beta-galactosidase activity - - - 0.000000000000000000000000000000000000000000000000000000000000004723 222.0
DYD1_k127_3209214_14 Chromatin associated protein KTI12 - - - 0.00000000000000000000000000000000000000004755 156.0
DYD1_k127_3209214_16 PFAM Mannose-6-phosphate isomerase - - - 0.00000000008532 63.0
DYD1_k127_3209214_2 Response regulator receiver domain protein - - - 4.327e-230 762.0
DYD1_k127_3209214_3 - - - - 1.006e-223 709.0
DYD1_k127_3209214_4 Pfam:DUF377 K20885 - 2.4.1.339,2.4.1.340 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000361 532.0
DYD1_k127_3209214_5 SusD family K21572 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000255 514.0
DYD1_k127_3209214_6 Zinc-binding dehydrogenase K13953 - 1.1.1.1 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001227 485.0
DYD1_k127_3209214_7 GHKL domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003317 479.0
DYD1_k127_3209214_8 Major facilitator Superfamily K08222 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002034 472.0
DYD1_k127_3209214_9 Transcriptional regulatory protein, C terminal - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001405 346.0
DYD1_k127_321991_0 TIGRFAM phytoene desaturase K10027 - 1.3.99.26,1.3.99.28,1.3.99.29,1.3.99.31 3.918e-218 685.0
DYD1_k127_321991_1 DNA photolyase K01669 - 4.1.99.3 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002495 568.0
DYD1_k127_321991_2 PFAM Squalene phytoene synthase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001172 373.0
DYD1_k127_321991_3 SRPBCC domain-containing protein - - - 0.0000000000000000000000000000000000000000000000000000000000000000000001845 241.0
DYD1_k127_321991_4 PFAM Fatty acid hydroxylase K15746 - 1.14.15.24 0.000000000000000000000000000000000000000000000000000000000000000000001916 238.0
DYD1_k127_321991_5 NUDIX domain K01823 - 5.3.3.2 0.000000000000000000000000000000000000000000000000000000000000001711 221.0
DYD1_k127_321991_6 Belongs to the sigma-70 factor family. ECF subfamily K03088 - - 0.00000000000000000000000000000000000000000003628 166.0
DYD1_k127_321991_7 lycopene cyclase - - - 0.0000000000000000000000000000004274 123.0
DYD1_k127_3238512_0 Carbon-nitrogen hydrolase K01501 - 3.5.5.1 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004799 409.0
DYD1_k127_3238512_1 - - - - 0.0000000000000000000000000000000000000000000000000000000000001783 220.0
DYD1_k127_3238512_2 SnoaL-like domain - - - 0.0000000003799 61.0
DYD1_k127_3239469_0 CHAT domain - - - 0.0 1523.0
DYD1_k127_3239469_1 Methylmalonyl-CoA mutase K01847 - 5.4.99.2 0.0 1065.0
DYD1_k127_3239469_10 Belongs to the small heat shock protein (HSP20) family K13993 - - 0.0000000000000000000000000000000000000005559 152.0
DYD1_k127_3239469_11 LytTr DNA-binding domain - - - 0.0000000000000002035 79.0
DYD1_k127_3239469_2 Belongs to the aldehyde dehydrogenase family K00128 - 1.2.1.3 1.683e-264 821.0
DYD1_k127_3239469_3 - - - - 2.285e-212 671.0
DYD1_k127_3239469_4 it binds specifically double-stranded DNA at a 9 bp consensus (dnaA box) 5'-TTATC CA A CA A-3'. DnaA binds to ATP and to acidic phospholipids K02313 GO:0003674,GO:0003676,GO:0003677,GO:0003688,GO:0003690,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005886,GO:0006139,GO:0006259,GO:0006260,GO:0006261,GO:0006270,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0016020,GO:0034641,GO:0034645,GO:0043170,GO:0043565,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044424,GO:0044464,GO:0046483,GO:0071704,GO:0071944,GO:0090304,GO:0097159,GO:1901360,GO:1901363,GO:1901576,GO:1990837 - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001493 571.0
DYD1_k127_3239469_5 PDZ domain (Also known as DHR or GLGF) - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003138 529.0
DYD1_k127_3239469_6 PFAM GH3 auxin-responsive promoter - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007214 454.0
DYD1_k127_3239469_7 serine-type endopeptidase activity K04771 - 3.4.21.107 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007164 459.0
DYD1_k127_3239469_8 Methylmalonyl-CoA mutase N-terminal domain subunit K01847 - 5.4.99.2 0.000000000000000000000000000000000000000000000000000000000003321 222.0
DYD1_k127_3239469_9 cheY-homologous receiver domain - - - 0.00000000000000000000000000000000000000000000000000000000007746 208.0
DYD1_k127_3245593_0 Pirin C-terminal cupin domain K06911 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001668 384.0
DYD1_k127_3245593_1 Belongs to the pirin family K06911 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001486 349.0
DYD1_k127_3245593_2 Nitroreductase family - - - 0.000000000000000000000000000000000000000000000000000007296 195.0
DYD1_k127_3245593_3 Divergent 4Fe-4S mono-cluster - - - 0.000000000000000000000000000000000000000000000000000109 189.0
DYD1_k127_3245593_4 Transcriptional regulator PadR-like family - - - 0.000000000000000000000000000000000009149 139.0
DYD1_k127_3245593_5 - - - - 0.000000000000000000000000006782 114.0
DYD1_k127_3245593_6 MacB-like periplasmic core domain K02004 - - 0.0000000001056 62.0
DYD1_k127_3260016_0 TIGRFAM Gliding motility-associated lipoprotein GldK - - - 8.539e-199 623.0
DYD1_k127_3260016_1 Uroporphyrinogen-III synthase K01719 - 4.2.1.75 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009039 421.0
DYD1_k127_3260016_2 Type IX secretion system membrane protein PorP/SprF - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001902 412.0
DYD1_k127_3260016_3 TIGRFAM Gliding motility-associated protein GldM - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001827 419.0
DYD1_k127_3260016_4 TIGRFAM gliding motility-associated protein GldL - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007847 370.0
DYD1_k127_3260016_5 Involved in the biosynthesis of porphyrin-containing compound - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000001783 290.0
DYD1_k127_3287932_0 FtsX-like permease family - - - 7.891e-285 893.0
DYD1_k127_3287932_1 domain, Protein - - - 0.000000000000000000002803 107.0
DYD1_k127_329372_0 UreE urease accessory protein, C-terminal domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000006597 271.0
DYD1_k127_329372_1 monooxygenase activity - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000004393 249.0
DYD1_k127_329372_2 Carboxymuconolactone decarboxylase family - - - 0.00000000000000000000000000000000000000000000000000000000000001418 219.0
DYD1_k127_329372_3 Cyclic nucleotide-monophosphate binding domain - - - 0.000000000000000000000000000000001141 132.0
DYD1_k127_329372_4 - - - - 0.0000000000000000000000000000000531 128.0
DYD1_k127_3309365_0 BNR Asp-box repeat - - - 1.919e-310 959.0
DYD1_k127_3309365_1 FtsX-like permease family K02004 - - 1.202e-256 813.0
DYD1_k127_3309365_2 Peptidase family M1 domain K01256 - 3.4.11.2 2.133e-255 813.0
DYD1_k127_3309365_3 Polysaccharide deacetylase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004272 391.0
DYD1_k127_3309365_4 domain protein K03455,K03499 - - 0.00000000000000000000000000000000000000004069 154.0
DYD1_k127_331009_0 Is required not only for elongation of protein synthesis but also for the initiation of all mRNA translation through initiator tRNA(fMet) aminoacylation K01874 GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006082,GO:0006139,GO:0006399,GO:0006412,GO:0006418,GO:0006518,GO:0006520,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0016070,GO:0019538,GO:0019752,GO:0034641,GO:0034645,GO:0034660,GO:0043038,GO:0043039,GO:0043043,GO:0043170,GO:0043436,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044281,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0071704,GO:0090304,GO:1901360,GO:1901564,GO:1901566,GO:1901576 6.1.1.10 6.9e-299 932.0
DYD1_k127_331009_1 Ribose-phosphate pyrophosphokinase K00948 - 2.7.6.1 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000682 499.0
DYD1_k127_331009_2 Tetratricopeptide repeat - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001577 467.0
DYD1_k127_331009_3 The natural substrate for this enzyme may be peptidyl- tRNAs which drop off the ribosome during protein synthesis K01056 GO:0003674,GO:0003824,GO:0004045,GO:0016787,GO:0016788,GO:0052689,GO:0140098,GO:0140101 3.1.1.29 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000002521 286.0
DYD1_k127_331009_4 This is one of the proteins that binds to the 5S RNA in the ribosome where it forms part of the central protuberance K02897 GO:0003674,GO:0003676,GO:0003723,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0006412,GO:0006518,GO:0006807,GO:0008097,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0015934,GO:0019538,GO:0019843,GO:0022625,GO:0022626,GO:0032991,GO:0034641,GO:0034645,GO:0043043,GO:0043170,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:0071704,GO:0097159,GO:1901363,GO:1901564,GO:1901566,GO:1901576,GO:1990904 - 0.00000000000000000000000000000000000000000000000000000000000000000002571 239.0
DYD1_k127_331009_6 Phosphoribosylformylglycinamidine synthase involved in the purines biosynthetic pathway. Catalyzes the ATP-dependent conversion of formylglycinamide ribonucleotide (FGAR) and glutamine to yield formylglycinamidine ribonucleotide (FGAM) and glutamate K01952 - 6.3.5.3 0.00000000000000106 76.0
DYD1_k127_3334213_0 C-terminal domain of CHU protein family - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002902 315.0
DYD1_k127_3334213_1 Belongs to the class I-like SAM-binding methyltransferase superfamily. RNA M5U methyltransferase family K03215 - 2.1.1.190 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000161 310.0
DYD1_k127_3341978_0 COGs COG0058 Glucan phosphorylase K00688,K00691 - 2.4.1.1,2.4.1.8 9.817e-234 734.0
DYD1_k127_3341978_1 MacB-like periplasmic core domain K02004 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003879 427.0
DYD1_k127_3341978_2 Flavin containing amine oxidoreductase - - - 0.0000000000000000000000000000002062 126.0
DYD1_k127_3384368_0 TIGRFAM acetyl-CoA carboxylase, biotin carboxylase K01961 - 6.3.4.14,6.4.1.2 7.105e-257 795.0
DYD1_k127_3384368_1 Belongs to the GPAT DAPAT family K00631 - 2.3.1.15 2.964e-232 732.0
DYD1_k127_3384368_10 C-terminal domain of CHU protein family - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008458 349.0
DYD1_k127_3384368_11 Specifically dimethylates two adjacent adenosines (A1518 and A1519) in the loop of a conserved hairpin near the 3'-end of 16S rRNA in the 30S particle. May play a critical role in biogenesis of 30S subunits K02528 - 2.1.1.182 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008891 308.0
DYD1_k127_3384368_12 Involved in peptide bond synthesis. Stimulates efficient translation and peptide-bond synthesis on native or reconstituted 70S ribosomes in vitro. Probably functions indirectly by altering the affinity of the ribosome for aminoacyl-tRNA, thus increasing their reactivity as acceptors for peptidyl transferase K02356 GO:0003674,GO:0003676,GO:0003723,GO:0003746,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006412,GO:0006414,GO:0006518,GO:0006807,GO:0008135,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0019538,GO:0034641,GO:0034645,GO:0043043,GO:0043170,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044424,GO:0044464,GO:0071704,GO:0097159,GO:1901363,GO:1901564,GO:1901566,GO:1901576 - 0.000000000000000000000000000000000000000000000000000000000000000000000002047 248.0
DYD1_k127_3384368_13 Necessary for efficient RNA polymerase transcription elongation past template-encoded arresting sites. The arresting sites in DNA have the property of trapping a certain fraction of elongating RNA polymerases that pass through, resulting in locked ternary complexes. Cleavage of the nascent transcript by cleavage factors such as GreA or GreB allows the resumption of elongation from the new 3'terminus. GreA releases sequences of 2 to 3 nucleotides K03624 - - 0.00000000000000000000000000000000000000000000000000000000000000000000006564 243.0
DYD1_k127_3384368_14 HIT family hydrolase K02503 - - 0.00000000000000000000000000000000000000000000000000000000005787 206.0
DYD1_k127_3384368_15 first, biotin carboxylase catalyzes the carboxylation of the carrier protein and then the transcarboxylase transfers the carboxyl group to form malonyl-CoA K02160 - - 0.00000000000000000000000000000000000000000000000000007639 192.0
DYD1_k127_3384368_16 - - - - 0.0000000000000000000000000000000000000000000000000091 193.0
DYD1_k127_3384368_17 TIGRFAM Gliding motility-associated ABC transporter permease protein GldF K01992 - - 0.0000000000000000000000000000000000000000000000008055 179.0
DYD1_k127_3384368_18 Tellurite resistance protein TerB - - - 0.0000000000000000000000000000000000000001241 154.0
DYD1_k127_3384368_19 Uncharacterized ACR, COG1399 - - - 0.0000000000000000000000000000000000000002121 155.0
DYD1_k127_3384368_2 ABC transporter substrate-binding component GldG K01992 - - 3.217e-200 638.0
DYD1_k127_3384368_20 Belongs to the bacterial ribosomal protein bL32 family K02911 - - 0.00000000000000000000000000000016 123.0
DYD1_k127_3384368_21 - - - - 0.0000000000000001354 83.0
DYD1_k127_3384368_3 Confers DNA tethering and processivity to DNA polymerases and other proteins. Acts as a clamp, forming a ring around DNA (a reaction catalyzed by the clamp-loading complex) which diffuses in an ATP-independent manner freely and bidirectionally along dsDNA. Initially characterized for its ability to contact the catalytic subunit of DNA polymerase III (Pol III), a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria K02338 - 2.7.7.7 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006542 608.0
DYD1_k127_3384368_4 Acts as a magnesium transporter K06213 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006932 533.0
DYD1_k127_3384368_5 Catalyzes the condensation reaction of fatty acid synthesis by the addition to an acyl acceptor of two carbons from malonyl-ACP. Catalyzes the first condensation reaction which initiates fatty acid synthesis and may therefore play a role in governing the total rate of fatty acid production. Possesses both acetoacetyl-ACP synthase and acetyl transacylase activities. Its substrate specificity determines the biosynthesis of branched- chain and or straight-chain of fatty acids K00648 GO:0003674,GO:0003824,GO:0006082,GO:0006629,GO:0006631,GO:0008150,GO:0008152,GO:0009987,GO:0016740,GO:0016746,GO:0016747,GO:0019752,GO:0032787,GO:0033818,GO:0043436,GO:0044237,GO:0044238,GO:0044255,GO:0044281,GO:0071704 2.3.1.180 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001694 516.0
DYD1_k127_3384368_6 Belongs to the PdxA family K00097 - 1.1.1.262 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004999 452.0
DYD1_k127_3384368_7 Pentapeptide repeats (9 copies) - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000136 422.0
DYD1_k127_3384368_8 Putative serine dehydratase domain K20757 - 4.3.1.27 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007585 387.0
DYD1_k127_3384368_9 Glycerol-3-phosphate dehydrogenase K00057 - 1.1.1.94 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001096 353.0
DYD1_k127_3402528_0 TonB-dependent Receptor Plug - - - 0.0 1142.0
DYD1_k127_3402528_1 phosphorylase K00691 - 2.4.1.8 0.0 1053.0
DYD1_k127_3402528_10 Nitroreductase family - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001205 358.0
DYD1_k127_3402528_11 SNO glutamine amidotransferase family K02501 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000002642 263.0
DYD1_k127_3402528_12 1-(5-phosphoribosyl)-5- (5-phosphoribosylamino)methylideneamino imidazole-4-carboxamide isomerase K01814 GO:0000105,GO:0000162,GO:0003674,GO:0003824,GO:0003949,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006082,GO:0006520,GO:0006547,GO:0006568,GO:0006576,GO:0006586,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0008652,GO:0009058,GO:0009072,GO:0009073,GO:0009308,GO:0009309,GO:0009987,GO:0016053,GO:0016853,GO:0016860,GO:0016861,GO:0018130,GO:0019438,GO:0019752,GO:0034641,GO:0042401,GO:0042430,GO:0042435,GO:0043436,GO:0044106,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0044283,GO:0044424,GO:0044464,GO:0046219,GO:0046394,GO:0046483,GO:0052803,GO:0071704,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576,GO:1901605,GO:1901607 5.3.1.16 0.0000000000000000000000000000000000000000000000000000000000000000000000000001683 263.0
DYD1_k127_3402528_13 Belongs to the PRA-CH family K11755 - 3.5.4.19,3.6.1.31 0.000000000000000000000000000000000000000000000000000000000000000000000005943 248.0
DYD1_k127_3402528_14 Haloacid dehalogenase superfamily, subfamily IA, variant 3 with third motif having DD or ED K01838 - 5.4.2.6 0.000000000000000000000000000000000000000000000000000000000000000000004694 241.0
DYD1_k127_3402528_2 Belongs to the glycosyl hydrolase 31 family K01187 - 3.2.1.20 0.0 1029.0
DYD1_k127_3402528_3 Major Facilitator K16211 - - 7.284e-204 649.0
DYD1_k127_3402528_4 Catalyzes the sequential NAD-dependent oxidations of L- histidinol to L-histidinaldehyde and then to L-histidine K00013 GO:0000105,GO:0003674,GO:0003824,GO:0004399,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006082,GO:0006520,GO:0006547,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0008652,GO:0009058,GO:0009987,GO:0016053,GO:0016491,GO:0016614,GO:0016616,GO:0018130,GO:0019438,GO:0019752,GO:0034641,GO:0043436,GO:0044237,GO:0044238,GO:0044249,GO:0044281,GO:0044283,GO:0044424,GO:0044444,GO:0044464,GO:0046394,GO:0046483,GO:0052803,GO:0055114,GO:0071704,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576,GO:1901605,GO:1901607 1.1.1.23 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009098 511.0
DYD1_k127_3402528_5 belongs to the imidazoleglycerol-phosphate dehydratase family K01089,K01693 GO:0000105,GO:0003674,GO:0003824,GO:0004424,GO:0006082,GO:0006520,GO:0006547,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0008652,GO:0009058,GO:0009987,GO:0016053,GO:0016829,GO:0016835,GO:0016836,GO:0018130,GO:0019438,GO:0019752,GO:0034641,GO:0043436,GO:0044237,GO:0044238,GO:0044249,GO:0044281,GO:0044283,GO:0046394,GO:0046483,GO:0052803,GO:0071704,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576,GO:1901605,GO:1901607 3.1.3.15,4.2.1.19 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003735 499.0
DYD1_k127_3402528_6 PFAM Periplasmic binding protein LacI transcriptional regulator K02529,K05499 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001365 428.0
DYD1_k127_3402528_7 ATP phosphoribosyltransferase K00765 GO:0000105,GO:0003674,GO:0003824,GO:0003879,GO:0006082,GO:0006520,GO:0006547,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0008652,GO:0009058,GO:0009987,GO:0016053,GO:0016740,GO:0016757,GO:0016763,GO:0018130,GO:0019438,GO:0019752,GO:0034641,GO:0043436,GO:0044237,GO:0044238,GO:0044249,GO:0044281,GO:0044283,GO:0046394,GO:0046483,GO:0052803,GO:0071704,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576,GO:1901605,GO:1901607 2.4.2.17 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005541 398.0
DYD1_k127_3402528_8 Belongs to the class-II pyridoxal-phosphate-dependent aminotransferase family. Histidinol-phosphate aminotransferase subfamily K00817 - 2.6.1.9 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001941 396.0
DYD1_k127_3402528_9 IGPS catalyzes the conversion of PRFAR and glutamine to IGP, AICAR and glutamate. The HisF subunit catalyzes the cyclization activity that produces IGP and AICAR from PRFAR using the ammonia provided by the HisH subunit K02500 GO:0000107,GO:0003674,GO:0003824,GO:0016740,GO:0016757,GO:0016763 - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004966 363.0
DYD1_k127_3447552_0 alpha-L-arabinofuranosidase - - - 0.0 1630.0
DYD1_k127_3447552_1 Adenylyl- / guanylyl cyclase, catalytic domain - - - 2.48e-213 679.0
DYD1_k127_3447552_10 Serine aminopeptidase, S33 K06889 - - 0.00000000000000000000000000000000000000000000000000000001481 207.0
DYD1_k127_3447552_11 DinB family - - - 0.00000000000000000000000000000000000000000000000000004583 194.0
DYD1_k127_3447552_12 Rhodanese Homology Domain K01011 - 2.8.1.1,2.8.1.2 0.0000000000000000000000000000000000000000002439 169.0
DYD1_k127_3447552_13 Mycolic acid cyclopropane synthetase K00574 - 2.1.1.79 0.000000000000000000000000000000000002166 150.0
DYD1_k127_3447552_15 - - - - 0.00000000000002654 79.0
DYD1_k127_3447552_16 Leucyl aminopeptidase (Aminopeptidase t) - - - 0.000000003439 68.0
DYD1_k127_3447552_2 proline dipeptidase activity K01271 - 3.4.13.9 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000632 514.0
DYD1_k127_3447552_3 Poorly processive, error-prone DNA polymerase involved in untargeted mutagenesis. Copies undamaged DNA at stalled replication forks, which arise in vivo from mismatched or misaligned primer ends. These misaligned primers can be extended by PolIV. Exhibits no 3'-5' exonuclease (proofreading) activity. May be involved in translesional synthesis, in conjunction with the beta clamp from PolIII K02346 - 2.7.7.7 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004951 502.0
DYD1_k127_3447552_4 Zn-dependent protease with chaperone function K03799,K06013 - 3.4.24.84 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001038 484.0
DYD1_k127_3447552_5 AMP-dependent synthetase K01897 - 6.2.1.3 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000146 486.0
DYD1_k127_3447552_6 Serine aminopeptidase, S33 K06889 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004176 353.0
DYD1_k127_3447552_7 Neutral/alkaline non-lysosomal ceramidase, N-terminal - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000001969 290.0
DYD1_k127_3447552_8 Mediates influx of magnesium ions K03284 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000007022 278.0
DYD1_k127_3447552_9 Protein of unknown function (DUF2911) - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000005041 261.0
DYD1_k127_3460405_0 Catalyzes the conversion of acetate into acetyl-CoA (AcCoA), an essential intermediate at the junction of anabolic and catabolic pathways. AcsA undergoes a two-step reaction. In the first half reaction, AcsA combines acetate with ATP to form acetyl-adenylate (AcAMP) intermediate. In the second half reaction, it can then transfer the acetyl group from AcAMP to the sulfhydryl group of CoA, forming the product AcCoA K01895 - 6.2.1.1 1.125e-207 652.0
DYD1_k127_3460405_1 Provides the precursors necessary for DNA synthesis. Catalyzes the biosynthesis of deoxyribonucleotides from the corresponding ribonucleotides K00525 - 1.17.4.1 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002316 607.0
DYD1_k127_3472057_0 Involved in the tonB-independent uptake of proteins - - - 0.0 1229.0
DYD1_k127_3472057_1 Peptidase family C25 - - - 0.0 1043.0
DYD1_k127_3472057_2 long-chain fatty acid transport protein - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000287 498.0
DYD1_k127_3472057_3 PFAM YicC-like family, N-terminal region - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004195 343.0
DYD1_k127_3472057_4 PFAM Peptidase M16 inactive domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006337 310.0
DYD1_k127_3472057_5 PFAM FAD dependent oxidoreductase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000008972 301.0
DYD1_k127_3472057_6 PFAM Metallo-beta-lactamase superfamily - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000005763 284.0
DYD1_k127_3472057_7 Belongs to the CDP-alcohol phosphatidyltransferase class-I family K17103 - 2.7.8.8 0.000000000000000000000000000000000000000000000000000000000000000000000001204 251.0
DYD1_k127_3472057_8 - - - - 0.00000000000000000000000000000000000000000000000000000000000000000009823 238.0
DYD1_k127_3472057_9 Belongs to the arginase family K01479 - 3.5.3.8 0.00000001737 55.0
DYD1_k127_348159_0 Allows the formation of correctly charged Gln-tRNA(Gln) through the transamidation of misacylated Glu-tRNA(Gln) in organisms which lack glutaminyl-tRNA synthetase. The reaction takes place in the presence of glutamine and ATP through an activated gamma-phospho-Glu-tRNA(Gln) K02433 - 6.3.5.6,6.3.5.7 7.145e-199 629.0
DYD1_k127_348159_1 PFAM Tetratricopeptide - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000553 479.0
DYD1_k127_348159_2 Peptidase, M23 - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000621 420.0
DYD1_k127_348159_3 Polysaccharide biosynthesis protein - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000002641 271.0
DYD1_k127_348159_4 Domain of unknown function (DUF4292) - - - 0.0000000000000000000000000000000000000000000009195 174.0
DYD1_k127_348159_5 PFAM Transglycosylase SLT domain K08307 - - 0.0000000000000000000000000000000000000000009378 161.0
DYD1_k127_348159_6 Part of the twin-arginine translocation (Tat) system that transports large folded proteins containing a characteristic twin-arginine motif in their signal peptide across membranes. TatA could form the protein-conducting channel of the Tat system K03116 - - 0.00000000000000002297 83.0
DYD1_k127_3507697_0 ABC transporter - - - 8.662e-294 907.0
DYD1_k127_3507697_1 FtsX-like permease family - - - 1.222e-249 797.0
DYD1_k127_3507697_2 lysine 2,3-aminomutase K01843 - 5.4.3.2 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004704 605.0
DYD1_k127_3507697_3 symporter activity K03307 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005371 548.0
DYD1_k127_3507697_4 Thioredoxin-like - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000001041 302.0
DYD1_k127_3507697_5 beta-lysine N-acetyltransferase K21935 - 2.3.1.264 0.00000000000000000000000000000000000000000000000000000000000000000001237 243.0
DYD1_k127_3507697_6 PFAM transcriptional regulator PadR family protein - - - 0.000000000000000000000000000000000000000000000006888 173.0
DYD1_k127_3507697_7 MarR family - - - 0.0000000000000000000000000000000000000005644 155.0
DYD1_k127_3507697_8 Belongs to the thiolase family K00626,K00632 - 2.3.1.16,2.3.1.9 0.0000000000000000000000001285 106.0
DYD1_k127_3509130_0 PFAM Family of - - - 0.0 1291.0
DYD1_k127_3509130_1 CheY-like receiver AAA-type ATPase and DNA-binding domains - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001468 563.0
DYD1_k127_3509130_10 Thioesterase - - - 0.000000000000000000000000000000000000000004677 158.0
DYD1_k127_3509130_11 - - - - 0.00000000000000000000000000000007862 131.0
DYD1_k127_3509130_2 Dehydrogenase E1 component K00615 - 2.2.1.1 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004129 521.0
DYD1_k127_3509130_3 Required for the formation of a threonylcarbamoyl group on adenosine at position 37 (t(6)A37) in tRNAs that read codons beginning with adenine. Is involved in the transfer of the threonylcarbamoyl moiety of threonylcarbamoyl-AMP (TC-AMP) to the N6 group of A37, together with TsaE and TsaB. TsaD likely plays a direct catalytic role in this reaction K01409 GO:0000408,GO:0002949,GO:0005575,GO:0005622,GO:0005623,GO:0006139,GO:0006396,GO:0006399,GO:0006400,GO:0006725,GO:0006807,GO:0008033,GO:0008150,GO:0008152,GO:0009451,GO:0009987,GO:0010467,GO:0016070,GO:0032991,GO:0034470,GO:0034641,GO:0034660,GO:0043170,GO:0043412,GO:0044237,GO:0044238,GO:0044424,GO:0044464,GO:0046483,GO:0070525,GO:0071704,GO:0090304,GO:1901360 2.3.1.234 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000115 483.0
DYD1_k127_3509130_4 PFAM Acyl-protein synthetase, LuxE - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002522 368.0
DYD1_k127_3509130_5 Cell wall-associated hydrolase (invasion-associated protein) - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003232 341.0
DYD1_k127_3509130_6 Predicted periplasmic lipoprotein (DUF2279) - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000001804 298.0
DYD1_k127_3509130_7 the 2 termini fold to resemble tRNA(Ala) and it encodes a tag peptide , a short internal open reading frame. During trans-translation Ala- aminoacylated tmRNA acts like a tRNA, entering the A-site of stalled ribosomes, displacing the stalled mRNA. The ribosome then switches to translate the ORF on the tmRNA K03664 - - 0.00000000000000000000000000000000000000000000000000000000000001241 218.0
DYD1_k127_3509130_8 HNH endonuclease - - - 0.0000000000000000000000000000000000000000000000000000003881 196.0
DYD1_k127_3509130_9 - - - - 0.00000000000000000000000000000000000000000001503 170.0
DYD1_k127_3516399_0 permease - - - 2.628e-294 922.0
DYD1_k127_3516399_1 FtsX-like permease family - - - 7.903e-290 910.0
DYD1_k127_3516399_2 MacB-like periplasmic core domain K02004 - - 1.549e-233 748.0
DYD1_k127_3516399_3 FtsX-like permease family K02004 - - 2.946e-215 696.0
DYD1_k127_3516399_4 Catalyzes the conversion of 1-hydroxy-2-methyl-2-(E)- butenyl 4-diphosphate (HMBPP) into a mixture of isopentenyl diphosphate (IPP) and dimethylallyl diphosphate (DMAPP). Acts in the terminal step of the DOXP MEP pathway for isoprenoid precursor biosynthesis K03527 - 1.17.7.4 2.478e-195 615.0
DYD1_k127_3516399_5 two component, sigma54 specific, transcriptional regulator, Fis family - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003026 471.0
DYD1_k127_3516399_6 Histidine kinase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000154 439.0
DYD1_k127_3516399_7 COGs COG0265 Trypsin-like serine protease typically periplasmic contain C-terminal PDZ domain - - - 0.0000000000000000000000008555 108.0
DYD1_k127_3516399_9 Outer membrane protein beta-barrel domain - - - 0.000000003758 65.0
DYD1_k127_351898_0 Catalyzes the radical-mediated insertion of two sulfur atoms into the C-6 and C-8 positions of the octanoyl moiety bound to the lipoyl domains of lipoate-dependent enzymes, thereby converting the octanoylated domains into lipoylated derivatives K03644 - 2.8.1.8 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008369 529.0
DYD1_k127_351898_1 Motility related/secretion protein - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001961 349.0
DYD1_k127_351898_2 - - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000001765 272.0
DYD1_k127_351898_3 The glycine cleavage system catalyzes the degradation of glycine. The H protein shuttles the methylamine group of glycine from the P protein to the T protein K02437 - - 0.0000000000000000000000000000000000000000000000000000009749 194.0
DYD1_k127_351898_4 mucin-desulfating sulfatase - - - 0.0000001375 53.0
DYD1_k127_3528053_0 Produces ATP from ADP in the presence of a proton gradient across the membrane. The catalytic sites are hosted primarily by the beta subunits K02112 - 3.6.3.14 6.948e-281 868.0
DYD1_k127_3528053_1 Peptidase family M28 - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000042 615.0
DYD1_k127_3528053_10 - - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003893 334.0
DYD1_k127_3528053_11 Catalyzes the reversible transfer of the terminal phosphate group between ATP and AMP. Plays an important role in cellular energy homeostasis and in adenine nucleotide metabolism K00939 - 2.7.4.3 0.0000000000000000000000000000000000000000000000000000000000000000000000000001154 262.0
DYD1_k127_3528053_12 uracil phosphoribosyltransferase K00761 - 2.4.2.9 0.0000000000000000000000000000000000000000000000000000000000000000000000004342 252.0
DYD1_k127_3528053_13 Belongs to the purine pyrimidine phosphoribosyltransferase family K00760 - 2.4.2.8 0.00000000000000000000000000000000000000000000000000000000007219 209.0
DYD1_k127_3528053_14 Participates actively in the response to hyperosmotic and heat shock by preventing the aggregation of stress-denatured proteins, in association with DnaK and GrpE. It is the nucleotide exchange factor for DnaK and may function as a thermosensor. Unfolded proteins bind initially to DnaJ K03687 GO:0000166,GO:0000774,GO:0003674,GO:0005488,GO:0005515,GO:0008150,GO:0017076,GO:0030234,GO:0030554,GO:0036094,GO:0050790,GO:0051082,GO:0060589,GO:0060590,GO:0065007,GO:0065009,GO:0097159,GO:0098772,GO:1901265,GO:1901363 - 0.0000000000000000000000000000000000000000000000364 177.0
DYD1_k127_3528053_15 proton-transporting ATP synthase activity, rotational mechanism K02114 GO:0003674,GO:0003824,GO:0005215,GO:0005575,GO:0005622,GO:0005623,GO:0005886,GO:0006139,GO:0006163,GO:0006164,GO:0006725,GO:0006753,GO:0006754,GO:0006793,GO:0006796,GO:0006807,GO:0006810,GO:0006811,GO:0006812,GO:0008150,GO:0008152,GO:0008324,GO:0009058,GO:0009117,GO:0009123,GO:0009124,GO:0009126,GO:0009127,GO:0009141,GO:0009142,GO:0009144,GO:0009145,GO:0009150,GO:0009152,GO:0009156,GO:0009161,GO:0009165,GO:0009167,GO:0009168,GO:0009199,GO:0009201,GO:0009205,GO:0009206,GO:0009259,GO:0009260,GO:0009987,GO:0015075,GO:0015077,GO:0015078,GO:0015318,GO:0015399,GO:0015405,GO:0015672,GO:0015985,GO:0015986,GO:0016020,GO:0016462,GO:0016469,GO:0016787,GO:0016817,GO:0016818,GO:0016887,GO:0017111,GO:0017144,GO:0018130,GO:0019438,GO:0019637,GO:0019693,GO:0019829,GO:0022804,GO:0022853,GO:0022857,GO:0022890,GO:0032991,GO:0033178,GO:0034220,GO:0034641,GO:0034654,GO:0042623,GO:0042625,GO:0042626,GO:0043492,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0044424,GO:0044425,GO:0044459,GO:0044464,GO:0044769,GO:0045259,GO:0045260,GO:0045261,GO:0045262,GO:0046034,GO:0046390,GO:0046483,GO:0046933,GO:0051179,GO:0051234,GO:0055085,GO:0055086,GO:0071704,GO:0071944,GO:0072521,GO:0072522,GO:0090407,GO:0090662,GO:0098655,GO:0098660,GO:0098662,GO:0098796,GO:0098797,GO:0099131,GO:0099132,GO:1901135,GO:1901137,GO:1901293,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576,GO:1902600 - 0.000000000000000000000000003035 112.0
DYD1_k127_3528053_16 - - - - 0.000000000000000000000000008583 115.0
DYD1_k127_3528053_17 The glycine cleavage system catalyzes the degradation of glycine. The P protein binds the alpha-amino group of glycine through its pyridoxal phosphate cofactor K00281,K00283 - 1.4.4.2 0.0000000000000000000001834 96.0
DYD1_k127_3528053_2 ATP binding to DnaK triggers the release of the substrate protein, thus completing the reaction cycle. Several rounds of ATP-dependent interactions between DnaJ, DnaK and GrpE are required for fully efficient folding. Also involved, together with DnaK and GrpE, in the DNA replication of plasmids through activation of initiation proteins K03686 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004258 555.0
DYD1_k127_3528053_3 COG0457 FOG TPR repeat - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009588 550.0
DYD1_k127_3528053_4 An essential GTPase which binds GTP, GDP and possibly (p)ppGpp with moderate affinity, with high nucleotide exchange rates and a fairly low GTP hydrolysis rate. Plays a role in control of the cell cycle, stress response, ribosome biogenesis and in those bacteria that undergo differentiation, in morphogenesis control K03979 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001592 510.0
DYD1_k127_3528053_5 PFAM Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002814 502.0
DYD1_k127_3528053_6 COGs COG1668 ABC-type Na efflux pump permease component K01992 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000322 481.0
DYD1_k127_3528053_7 PFAM Serine dehydratase alpha chain K01752 - 4.3.1.17 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005969 467.0
DYD1_k127_3528053_8 PFAM M42 glutamyl aminopeptidase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006718 415.0
DYD1_k127_3528053_9 PFAM ABC transporter K01990 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000242 407.0
DYD1_k127_3545140_0 cyanophycin synthetase K03802 - 6.3.2.29,6.3.2.30 0.0 1226.0
DYD1_k127_3545140_1 asparaginase K13051 - 3.4.19.5 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002196 434.0
DYD1_k127_3545140_2 Belongs to the peptidase S51 family K13282 - 3.4.15.6 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009604 353.0
DYD1_k127_3545140_3 Catalyzes the formation of L-homocysteine from O- succinyl-L-homoserine (OSHS) and hydrogen sulfide K01739 - 2.5.1.48 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004824 314.0
DYD1_k127_3552799_0 Domain of Unknown Function (DUF1080) - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005107 312.0
DYD1_k127_3552799_1 Tetratricopeptide repeat - - - 0.000000000000000000000000000000000000000000000000000000000000000008313 227.0
DYD1_k127_3552799_2 translation initiation factor activity - - - 0.000000000000000000000000000000000000000000004433 176.0
DYD1_k127_3552799_3 Domain of Unknown Function (DUF1080) - - - 0.000000000000000000000000000000000002482 138.0
DYD1_k127_3552799_4 Cyclic nucleotide-monophosphate binding domain - - - 0.000000000000000000000000000007421 126.0
DYD1_k127_3552799_5 Domain of unknown function (DUF4395) - - - 0.000000000000002215 82.0
DYD1_k127_3589639_0 Part of the Sec protein translocase complex. Interacts with the SecYEG preprotein conducting channel. SecDF uses the proton motive force (PMF) to complete protein translocation after the ATP-dependent function of SecA K03072,K12257 - - 3.064e-251 790.0
DYD1_k127_3589639_1 Pyrophosphatase that catalyzes the hydrolysis of nucleoside triphosphates to their monophosphate derivatives, with a high preference for the non-canonical purine nucleotides XTP (xanthosine triphosphate), dITP (deoxyinosine triphosphate) and ITP. Seems to function as a house-cleaning enzyme that removes non-canonical purine nucleotides from the nucleotide pool, thus preventing their incorporation into DNA RNA and avoiding chromosomal lesions K02428 GO:0003674,GO:0003824,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006139,GO:0006725,GO:0006753,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0009056,GO:0009058,GO:0009141,GO:0009143,GO:0009987,GO:0016462,GO:0016787,GO:0016817,GO:0016818,GO:0018130,GO:0019438,GO:0019439,GO:0019637,GO:0034404,GO:0034641,GO:0034654,GO:0034655,GO:0044237,GO:0044238,GO:0044248,GO:0044249,GO:0044270,GO:0044271,GO:0044281,GO:0044283,GO:0044424,GO:0044444,GO:0044464,GO:0046434,GO:0046483,GO:0046700,GO:0047429,GO:0055086,GO:0071704,GO:1901292,GO:1901360,GO:1901361,GO:1901362,GO:1901575,GO:1901576 3.6.1.66 0.000000000000000000000000000000000000000000000000000000000000000000000002806 248.0
DYD1_k127_3589639_2 Belongs to the uridine kinase family K00876 - 2.7.1.48 0.000000000000000000000000000000000000000000000000000000000000000000000003726 249.0
DYD1_k127_3589639_3 PFAM FKBP-type peptidyl-prolyl cis-trans isomerase K01802,K03767,K03772,K03773 - 5.2.1.8 0.00000000000000000000000000001045 121.0
DYD1_k127_3590811_0 CHAT domain - - - 2.026e-244 785.0
DYD1_k127_3590811_1 DEAD DEAH box helicase K05591 - 3.6.4.13 1.22e-212 668.0
DYD1_k127_3590811_2 PFAM Amidohydrolase family - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003459 435.0
DYD1_k127_3590811_3 PFAM FMN-dependent alpha-hydroxy acid dehydrogenase K00101,K00467,K16422 - 1.1.2.3,1.1.3.46,1.13.12.4 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005366 406.0
DYD1_k127_3590811_4 PFAM Adenylate and Guanylate cyclase catalytic domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000001305 248.0
DYD1_k127_3590811_5 cAMP biosynthetic process - - - 0.000000000000000000000000000000000000000000000000000002868 217.0
DYD1_k127_3590811_6 Metal dependent phosphohydrolases with conserved 'HD' motif. - - - 0.0000000000000000000000000000000000000000000000000006518 210.0
DYD1_k127_3590811_7 - - - - 0.00003133 51.0
DYD1_k127_3593274_0 PFAM Glutamine amidotransferase, class-II K00764 - 2.4.2.14 1e-323 998.0
DYD1_k127_3593274_1 Cystathionine beta-synthase K01697 - 4.2.1.22 7.051e-240 747.0
DYD1_k127_3593274_10 Provides the (R)-glutamate required for cell wall biosynthesis K01776 - 5.1.1.3 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001151 360.0
DYD1_k127_3593274_11 - - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003836 366.0
DYD1_k127_3593274_12 PFAM EamA-like transporter family - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001607 321.0
DYD1_k127_3593274_13 Catalyzes the phosphorylation of the position 2 hydroxy group of 4-diphosphocytidyl-2C-methyl-D-erythritol K00919 GO:0003674,GO:0003824,GO:0006793,GO:0006796,GO:0008150,GO:0008152,GO:0009987,GO:0016301,GO:0016310,GO:0016740,GO:0016772,GO:0016773,GO:0044237,GO:0050515 2.7.1.148 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002637 310.0
DYD1_k127_3593274_14 Pyrimidine operon attenuation protein uracil phosphoribosyltransferase K02825 - 2.4.2.9 0.0000000000000000000000000000000000000000000000000000000000000000000000000000107 263.0
DYD1_k127_3593274_15 Endoribonuclease L-PSP K15067 - 3.5.99.5 0.0000000000000000000000000000000000000000000000000000000000000000000004792 239.0
DYD1_k127_3593274_16 - - - - 0.0000000000000000000000000000000000000000000000000000000004639 204.0
DYD1_k127_3593274_17 Belongs to the HesB IscA family K13628 - - 0.000000000000000000000000000000000000000000000000000001294 192.0
DYD1_k127_3593274_18 chlorophyll binding - - - 0.00000000000000000000000000000000000000000000000000348 196.0
DYD1_k127_3593274_19 chlorophyll binding - - - 0.00000000000000000000000000000000000000000000000001221 201.0
DYD1_k127_3593274_2 Catalyzes the base-exchange of a guanine (G) residue with the queuine precursor 7-aminomethyl-7-deazaguanine (PreQ1) at position 34 (anticodon wobble position) in tRNAs with GU(N) anticodons (tRNA-Asp, -Asn, -His and -Tyr). Catalysis occurs through a double-displacement mechanism. The nucleophile active site attacks the C1' of nucleotide 34 to detach the guanine base from the RNA, forming a covalent enzyme-RNA intermediate. The proton acceptor active site deprotonates the incoming PreQ1, allowing a nucleophilic attack on the C1' of the ribose to form the product. After dissociation, two additional enzymatic reactions on the tRNA convert PreQ1 to queuine (Q), resulting in the hypermodified nucleoside queuosine (7-(((4,5-cis-dihydroxy-2- cyclopenten-1-yl)amino)methyl)-7-deazaguanosine) K00773 - 2.4.2.29 3.21e-199 625.0
DYD1_k127_3593274_20 Domain of unknown function (DUF4198) - - - 0.0000000000000000000000000000000000000000000000306 179.0
DYD1_k127_3593274_21 EVE domain - - - 0.000000000000000000000000000000000000000000004464 168.0
DYD1_k127_3593274_22 Glyoxalase-like domain K05606 - 5.1.99.1 0.0000000000000000000000000000000000000002267 153.0
DYD1_k127_3593274_23 - - - - 0.00000000000000000000000000000000000001629 162.0
DYD1_k127_3593274_24 Protein of unknown function (DUF3494) - - - 0.00000000000000000000000000000000001633 151.0
DYD1_k127_3593274_26 Penicillin-Binding Protein C-terminus Family K05367 - 2.4.1.129 0.000000000000976 71.0
DYD1_k127_3593274_27 Protein of unknown function (DUF3494) - - - 0.000000001097 59.0
DYD1_k127_3593274_3 Belongs to the peptidase M24B family K01262 - 3.4.11.9 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003727 591.0
DYD1_k127_3593274_4 Belongs to the ATCase OTCase family K00609 GO:0003674,GO:0003824,GO:0004070,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006139,GO:0006220,GO:0006221,GO:0006725,GO:0006753,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009117,GO:0009165,GO:0009218,GO:0009220,GO:0009259,GO:0009260,GO:0009987,GO:0016740,GO:0016741,GO:0016743,GO:0018130,GO:0019438,GO:0019637,GO:0019693,GO:0034641,GO:0034654,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0044424,GO:0044464,GO:0046390,GO:0046483,GO:0055086,GO:0071704,GO:0072527,GO:0072528,GO:0090407,GO:1901135,GO:1901137,GO:1901293,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576 2.1.3.2 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001611 535.0
DYD1_k127_3593274_5 PFAM glycosyl transferase family 9 K02843 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001042 520.0
DYD1_k127_3593274_6 Enoyl- acyl-carrier-protein reductase NADH K00208 - 1.3.1.10,1.3.1.9 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009831 471.0
DYD1_k127_3593274_7 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006589 475.0
DYD1_k127_3593274_8 Mechanosensitive ion channel K16052 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006316 429.0
DYD1_k127_3593274_9 Permease YjgP YjgQ family K11720 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005169 413.0
DYD1_k127_361153_0 Zinc carboxypeptidase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002813 428.0
DYD1_k127_361153_1 Acts as a magnesium transporter K06213 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001773 366.0
DYD1_k127_361153_2 Domain of unknown function (DUF4440) - - - 0.000000000000000000000000000000000000000000000000000000000001015 219.0
DYD1_k127_376417_0 phenazine biosynthesis protein, PhzF family - - - 0.000000000000000000000000000000000000000000000000000000000000000000000005048 247.0
DYD1_k127_376417_1 glyoxalase - - - 0.0000000000000000000000000000000000000000000000000000000000000005882 221.0
DYD1_k127_376417_2 Zn-dependent protease - - - 0.0000000000000000000000000000000000000000000273 168.0
DYD1_k127_377110_0 Sugar (and other) transporter - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001031 581.0
DYD1_k127_377110_1 2Fe-2S iron-sulfur cluster binding domain K00240 - 1.3.5.1,1.3.5.4 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006205 400.0
DYD1_k127_377110_2 Aldo/keto reductase family - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000768 385.0
DYD1_k127_377110_3 Fumarate reductase flavoprotein C-term K00239 - 1.3.5.1,1.3.5.4 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000007401 289.0
DYD1_k127_377110_4 - - - - 0.0000000000000000000000000000000000002013 147.0
DYD1_k127_377110_5 - - - - 0.0000000000000000227 85.0
DYD1_k127_377110_6 YtxH-like protein - - - 0.0000002418 56.0
DYD1_k127_3788426_0 Amidohydrolase family - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004863 561.0
DYD1_k127_3788426_1 BNR Asp-box repeat - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001968 369.0
DYD1_k127_3788426_2 subfamily IA, variant 3 with third motif having DD or ED - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000003241 278.0
DYD1_k127_3788426_3 Conserved hypothetical protein (DUF2461) - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000001289 259.0
DYD1_k127_3788426_4 beta-galactosidase activity - - - 0.00000000000000000000000000000000000000000000003106 174.0
DYD1_k127_3788426_5 - - - - 0.0000008465 58.0
DYD1_k127_3802865_0 belongs to the aldehyde dehydrogenase family - - - 1.563e-275 853.0
DYD1_k127_3802865_1 CinA-like protein K03742,K03743 - 3.5.1.42 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000793 531.0
DYD1_k127_3802865_2 Belongs to the PEP-utilizing enzyme family K01006 - 2.7.9.1 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001446 430.0
DYD1_k127_3802865_3 Protein of unknown function (DUF4197) - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002462 334.0
DYD1_k127_3822873_0 Catalyzes the reversible interconversion of isobutyryl- CoA and n-butyryl-CoA, using radical chemistry. Also exhibits GTPase activity, associated with its G-protein domain (MeaI) that functions as a chaperone that assists cofactor delivery and proper holo-enzyme assembly K11942 - 5.4.99.13 0.0 1908.0
DYD1_k127_3822873_1 Domain of unknown function (DUF5117) - - - 0.0 1129.0
DYD1_k127_3822873_10 NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be a menaquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient K00333,K13378 - 1.6.5.3 3.254e-196 616.0
DYD1_k127_3822873_11 Sulfatase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003634 614.0
DYD1_k127_3822873_12 COGs COG5616 integral membrane protein - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001112 572.0
DYD1_k127_3822873_13 PFAM Amidohydrolase family K01468 - 3.5.2.7 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001333 556.0
DYD1_k127_3822873_14 NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient. This subunit may bind ubiquinone K00337 - 1.6.5.3 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001351 492.0
DYD1_k127_3822873_15 Bifunctional enzyme that catalyzes the epimerization of the S- and R-forms of NAD(P)HX and the dehydration of the S-form of NAD(P)HX at the expense of ADP, which is converted to AMP. This allows the repair of both epimers of NAD(P)HX, a damaged form of NAD(P)H that is a result of enzymatic or heat-dependent hydration K17758,K17759 - 4.2.1.136,5.1.99.6 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003833 493.0
DYD1_k127_3822873_16 Aminotransferase class-V - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001992 472.0
DYD1_k127_3822873_17 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain K00175 - 1.2.7.11,1.2.7.3 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001532 445.0
DYD1_k127_3822873_18 Amidohydrolase K07045 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000297 426.0
DYD1_k127_3822873_19 Psort location CytoplasmicMembrane, score 10.00 - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007985 430.0
DYD1_k127_3822873_2 gtp-binding protein typa K06207 - - 2.015e-293 910.0
DYD1_k127_3822873_20 PFAM Receptor family ligand binding region - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002038 437.0
DYD1_k127_3822873_21 Amidohydrolase family - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002686 426.0
DYD1_k127_3822873_22 Two component regulator three Y - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002882 437.0
DYD1_k127_3822873_23 Thiazole biosynthesis protein ThiG K00459 - 1.13.12.16 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001845 403.0
DYD1_k127_3822873_24 Aminotransferase class I and II - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000488 404.0
DYD1_k127_3822873_25 enoyl-CoA hydratase isomerase family K15866 - 5.3.3.18 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001035 400.0
DYD1_k127_3822873_26 Metalloenzyme superfamily - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006525 399.0
DYD1_k127_3822873_27 deoxyhypusine monooxygenase activity K01256,K01387 - 3.4.11.2,3.4.24.3 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006892 380.0
DYD1_k127_3822873_28 Glycosyl transferases group 1 - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007171 370.0
DYD1_k127_3822873_29 Permease MlaE K02066 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002955 355.0
DYD1_k127_3822873_3 Prolyl oligopeptidase family - - - 1.916e-278 878.0
DYD1_k127_3822873_31 S-adenosylmethionine-dependent methyltransferase K06969 - 2.1.1.191 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001839 339.0
DYD1_k127_3822873_32 LytTr DNA-binding domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001565 325.0
DYD1_k127_3822873_33 ATPases associated with a variety of cellular activities K02065 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001291 316.0
DYD1_k127_3822873_34 PFAM histidine kinase internal region - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001151 310.0
DYD1_k127_3822873_35 DNA alkylation repair enzyme - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000006849 289.0
DYD1_k127_3822873_36 NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be a menaquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient K00331 - 1.6.5.3 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000002998 287.0
DYD1_k127_3822873_37 SpoU rRNA Methylase family K03437 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000158 288.0
DYD1_k127_3822873_38 COG1463 ABC-type transport system involved in resistance to organic solvents periplasmic component K02067 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000001112 279.0
DYD1_k127_3822873_39 helix_turn_helix, Lux Regulon - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000002374 267.0
DYD1_k127_3822873_4 Catalyzes the synthesis of GMP from XMP K01951 GO:0003674,GO:0003824,GO:0003921,GO:0003922,GO:0006139,GO:0006163,GO:0006164,GO:0006177,GO:0006725,GO:0006753,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009116,GO:0009117,GO:0009119,GO:0009123,GO:0009124,GO:0009126,GO:0009127,GO:0009150,GO:0009152,GO:0009156,GO:0009161,GO:0009163,GO:0009165,GO:0009167,GO:0009168,GO:0009259,GO:0009260,GO:0009987,GO:0016874,GO:0016879,GO:0016884,GO:0018130,GO:0019438,GO:0019637,GO:0019693,GO:0034404,GO:0034641,GO:0034654,GO:0042278,GO:0042451,GO:0042455,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0044283,GO:0046037,GO:0046128,GO:0046129,GO:0046390,GO:0046483,GO:0055086,GO:0071704,GO:0072521,GO:0072522,GO:0090407,GO:1901068,GO:1901070,GO:1901135,GO:1901137,GO:1901293,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576,GO:1901657,GO:1901659 6.3.5.2 6.777e-255 794.0
DYD1_k127_3822873_40 Histidine kinase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000005298 273.0
DYD1_k127_3822873_41 Acyl dehydratase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000009668 241.0
DYD1_k127_3822873_42 - - - - 0.000000000000000000000000000000000000000000000000000000000000001631 222.0
DYD1_k127_3822873_43 NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient K00338 - 1.6.5.3 0.000000000000000000000000000000000000000000000000000000000000006029 219.0
DYD1_k127_3822873_44 TIGRFAM RNA polymerase sigma factor, sigma-70 family K03088 - - 0.0000000000000000000000000000000000000000000000000000000000007294 215.0
DYD1_k127_3822873_45 Catalyzes a salvage reaction resulting in the formation of AMP, that is energically less costly than de novo synthesis K00759 - 2.4.2.7 0.00000000000000000000000000000000000000000000000000000000007746 208.0
DYD1_k127_3822873_46 Predicted membrane protein (DUF2157) - - - 0.00000000000000000000000000000000000000000000000000000001056 209.0
DYD1_k127_3822873_47 - - - - 0.00000000000000000000000000000000000000000000000000000001564 205.0
DYD1_k127_3822873_48 - - - - 0.00000000000000000000000000000000000000000000000000001842 203.0
DYD1_k127_3822873_49 Outer membrane protein beta-barrel domain - - - 0.0000000000000000000000000000000000000000000000000001148 194.0
DYD1_k127_3822873_5 X-Pro dipeptidyl-peptidase C-terminal non-catalytic domain K06978 - - 3.68e-253 785.0
DYD1_k127_3822873_50 NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be a menaquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient K00332 - 1.6.5.3 0.000000000000000000000000000000000000000000000001328 178.0
DYD1_k127_3822873_51 Peptidase S16, lon domain protein K01338,K07157 - 3.4.21.53 0.0000000000000000000000000000000000000000000000111 178.0
DYD1_k127_3822873_52 Belongs to the complex I subunit 6 family K00339 - 1.6.5.3 0.0000000000000000000000000000000000000003077 155.0
DYD1_k127_3822873_53 Universal stress protein - - - 0.00000000000000000000000000000000000006952 153.0
DYD1_k127_3822873_54 OsmC-like protein K07397 - - 0.0000000000000000000000000000000002139 136.0
DYD1_k127_3822873_55 Protein of unknown function (DUF1272) K09984 - - 0.0000000000000000000000000000000008632 132.0
DYD1_k127_3822873_56 PFAM 4Fe-4S ferredoxin, iron-sulfur binding domain protein - - - 0.0000000000000000000000000000143 120.0
DYD1_k127_3822873_57 phosphoesterase, PA-phosphatase related - - - 0.00000000000000000000000000002657 124.0
DYD1_k127_3822873_58 endonuclease containing a URI domain K07461 - - 0.0000000000000000000001296 98.0
DYD1_k127_3822873_59 NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be a menaquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient K00340 - 1.6.5.3 0.0000000000000000000004061 97.0
DYD1_k127_3822873_6 2-oxoacid acceptor oxidoreductase, alpha subunit K00174 - 1.2.7.11,1.2.7.3 2.542e-250 786.0
DYD1_k127_3822873_60 Domain of unknown function (DUF4136) - - - 0.000000000000000000006001 100.0
DYD1_k127_3822873_64 TPR repeat-containing protein - - - 0.0000000002706 70.0
DYD1_k127_3822873_65 Protein of unknown function (DUF3592) - - - 0.000000001328 67.0
DYD1_k127_3822873_66 Outer membrane protein beta-barrel domain - - - 0.00000002135 63.0
DYD1_k127_3822873_67 COG3209 Rhs family protein - - - 0.000001695 59.0
DYD1_k127_3822873_68 - - - - 0.00001734 49.0
DYD1_k127_3822873_7 Asparaginyl-tRNA synthetase K01893 - 6.1.1.22 4.224e-238 743.0
DYD1_k127_3822873_8 metal-dependent hydrolase with the TIM-barrel fold - - - 1.505e-225 712.0
DYD1_k127_3822873_9 RNA polymerase, sigma-54 factor K03092 - - 1.865e-220 692.0
DYD1_k127_3834871_0 ABC-2 type transporter K21397 - - 0.0 1327.0
DYD1_k127_3834871_1 Belongs to the UPF0753 family K09822 - - 0.0 1184.0
DYD1_k127_3834871_10 PFAM peptidase M28 - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009124 525.0
DYD1_k127_3834871_11 D-fructose-1,6-bisphosphate 1-phosphohydrolase class 1 K03841 - 3.1.3.11 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000109 520.0
DYD1_k127_3834871_12 PFAM Peptidase M16 inactive domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001491 515.0
DYD1_k127_3834871_13 Tyrosine recombinase XerC K04763 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007579 489.0
DYD1_k127_3834871_14 Belongs to the aspartokinase family K00928 - 2.7.2.4 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001234 458.0
DYD1_k127_3834871_15 Catalyzes the conversion of dihydroorotate to orotate with quinone as electron acceptor K00254 - 1.3.5.2 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005554 452.0
DYD1_k127_3834871_16 COGs COG4299 conserved - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008722 441.0
DYD1_k127_3834871_17 PFAM Transglycosylase SLT domain K08307 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000212 445.0
DYD1_k127_3834871_18 Protein of unknown function (DUF2851) - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008053 436.0
DYD1_k127_3834871_19 Belongs to the enoyl-CoA hydratase isomerase family K01692,K01715 - 4.2.1.17 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005907 413.0
DYD1_k127_3834871_2 DNA segregation ATPase FtsK SpoIIIE K03466 - - 4.145e-315 983.0
DYD1_k127_3834871_20 PFAM Phosphorylase superfamily K00757 - 2.4.2.3 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004334 400.0
DYD1_k127_3834871_21 - - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001702 393.0
DYD1_k127_3834871_22 Orotidine 5''-phosphate decarboxylase K01591 GO:0003674,GO:0003824,GO:0004590,GO:0006139,GO:0006206,GO:0006207,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009112,GO:0009987,GO:0016829,GO:0016830,GO:0016831,GO:0018130,GO:0019856,GO:0034641,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0046112,GO:0046483,GO:0055086,GO:0071704,GO:0072527,GO:0072528,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576 4.1.1.23 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000302 382.0
DYD1_k127_3834871_23 Methyltransferase required for the conversion of demethylmenaquinol (DMKH2) to menaquinol (MKH2) K03183 - 2.1.1.163,2.1.1.201 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001823 378.0
DYD1_k127_3834871_24 Belongs to the short-chain dehydrogenases reductases (SDR) family - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004493 361.0
DYD1_k127_3834871_25 PFAM O-methyltransferase K00588 - 2.1.1.104 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000002156 295.0
DYD1_k127_3834871_26 Protein of unknown function (DUF3078) - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000004245 300.0
DYD1_k127_3834871_27 Necessary for normal cell division and for the maintenance of normal septation K03978 GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0044424,GO:0044444,GO:0044464 - 0.00000000000000000000000000000000000000000000000000000000000000000000000000005936 262.0
DYD1_k127_3834871_28 sugar O-acyltransferase, sialic acid O-acetyltransferase NeuD family - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000009933 259.0
DYD1_k127_3834871_29 PFAM Outer membrane lipoprotein carrier protein LolA K03634 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000006291 257.0
DYD1_k127_3834871_3 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus K00341 - 1.6.5.3 1.455e-290 903.0
DYD1_k127_3834871_30 AraC family transcriptional regulator - - - 0.00000000000000000000000000000000000000000000000000000000000000000000004933 250.0
DYD1_k127_3834871_31 Outer membrane protein beta-barrel domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000006276 247.0
DYD1_k127_3834871_32 Endonuclease that specifically degrades the RNA of RNA- DNA hybrids K03469 - 3.1.26.4 0.0000000000000000000000000000000000000000000000000000000000000000000001265 241.0
DYD1_k127_3834871_33 PFAM MarC family integral membrane protein K05595 - - 0.0000000000000000000000000000000000000000000000000000000000000000007333 232.0
DYD1_k127_3834871_34 - - - - 0.0000000000000000000000000000000000000000000000000000000000000000007954 244.0
DYD1_k127_3834871_35 cheY-homologous receiver domain - - - 0.000000000000000000000000000000000000000000000000000000000000000002616 228.0
DYD1_k127_3834871_36 Domain of unknown function (DUF5122) beta-propeller - - - 0.0000000000000000000000000000000000000000000000000000000000000002663 252.0
DYD1_k127_3834871_37 PFAM phospholipase Carboxylesterase - - - 0.000000000000000000000000000000000000000000000000000000000000006033 224.0
DYD1_k127_3834871_38 - - - - 0.00000000000000000000000000000000000000000000000000000000000008086 215.0
DYD1_k127_3834871_39 Catalyzes a trans-dehydration via an enolate intermediate K03786 - 4.2.1.10 0.000000000000000000000000000000000000000000000000000000000004302 210.0
DYD1_k127_3834871_4 TonB dependent receptor K16089 - - 1.417e-218 699.0
DYD1_k127_3834871_40 Protein of unknown function (DUF2490) - - - 0.0000000000000000000000000000000000000000000000000000000002981 211.0
DYD1_k127_3834871_41 HmuY protein - - - 0.00000000000000000000000000000000000000000000000000000003701 203.0
DYD1_k127_3834871_42 Low molecular weight phosphotyrosine protein phosphatase K01104 - 3.1.3.48 0.00000000000000000000000000000000000000000000000001226 184.0
DYD1_k127_3834871_43 - - - - 0.00000000000000000000000000000000000000000000000002032 182.0
DYD1_k127_3834871_44 (GNAT) family K22441 - 2.3.1.57 0.000000000000000000000000000000000000000000005717 168.0
DYD1_k127_3834871_45 Peptidase dimerisation domain - - - 0.00000000000000000000000000000000000000000007855 161.0
DYD1_k127_3834871_46 Domain of unknown function (DUF1987) - - - 0.000000000000000000000000000000000001314 141.0
DYD1_k127_3834871_47 cytidine and deoxycytidylate deaminase K01489 - 3.5.4.5 0.0000000000000000000000000000000002291 138.0
DYD1_k127_3834871_48 domain protein - - - 0.00000000000000000000000000000007327 146.0
DYD1_k127_3834871_5 Bacterial protein of unknown function (DUF853) K06915 - - 9.234e-216 679.0
DYD1_k127_3834871_50 - - - - 0.00000000000000000001152 93.0
DYD1_k127_3834871_51 domain, Protein - - - 0.0000000000000002716 94.0
DYD1_k127_3834871_52 Tfp pilus assembly protein FimV - - - 0.0000000000000003165 87.0
DYD1_k127_3834871_6 OmpA family - - - 7.036e-213 680.0
DYD1_k127_3834871_7 WD40-like Beta Propeller Repeat - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001956 596.0
DYD1_k127_3834871_8 DNA polymerase III is a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria. This DNA polymerase also exhibits 3' to 5' exonuclease activity K02343 - 2.7.7.7 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006557 577.0
DYD1_k127_3834871_9 Saccharopine dehydrogenase K00290,K00293 - 1.5.1.10,1.5.1.7 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004081 542.0
DYD1_k127_3863262_0 PFAM TonB-dependent Receptor Plug Domain K02014 - - 3.387e-298 935.0
DYD1_k127_3863262_1 Belongs to the peptidase S41A family K03797 - 3.4.21.102 8.661e-238 745.0
DYD1_k127_3863262_10 Putative cyclase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000007289 298.0
DYD1_k127_3863262_11 PFAM UbiA prenyltransferase K03179 - 2.5.1.39 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000001702 283.0
DYD1_k127_3863262_12 Saccharopine dehydrogenase NADP binding domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000004714 280.0
DYD1_k127_3863262_13 Removes the formyl group from the N-terminal Met of newly synthesized proteins. Requires at least a dipeptide for an efficient rate of reaction. N-terminal L-methionine is a prerequisite for activity but the enzyme has broad specificity at other positions K01462 - 3.5.1.88 0.0000000000000000000000000000000000000000000000000000000000000000000000000003762 259.0
DYD1_k127_3863262_14 Responsible for the release of ribosomes from messenger RNA at the termination of protein biosynthesis. May increase the efficiency of translation by recycling ribosomes from one round of translation to another K02838 GO:0002181,GO:0002184,GO:0003674,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006412,GO:0006415,GO:0006518,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0016043,GO:0019538,GO:0022411,GO:0032984,GO:0034641,GO:0034645,GO:0043021,GO:0043023,GO:0043043,GO:0043170,GO:0043603,GO:0043604,GO:0043624,GO:0043933,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044424,GO:0044464,GO:0044877,GO:0071704,GO:0071840,GO:1901564,GO:1901566,GO:1901576 - 0.00000000000000000000000000000000000000000000000000000000000000000000002409 246.0
DYD1_k127_3863262_15 Catalyzes the transfer of a formyl group from 10- formyltetrahydrofolate to 5-phospho-ribosyl-glycinamide (GAR), producing 5-phospho-ribosyl-N-formylglycinamide (FGAR) and tetrahydrofolate K11175 - 2.1.2.2 0.000000000000000000000000000000000000000000000000000000000000000002137 231.0
DYD1_k127_3863262_16 Acetyl propionyl-CoA carboxylase alpha subunit K01960 - 6.4.1.1 0.0000000000000000000000000000000000000000000000000001704 189.0
DYD1_k127_3863262_17 Could be a nuclease involved in processing of the 5'-end of pre-16S rRNA K07447 GO:0000966,GO:0000967,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006139,GO:0006364,GO:0006396,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0009987,GO:0010467,GO:0016070,GO:0016072,GO:0022613,GO:0034470,GO:0034471,GO:0034641,GO:0034660,GO:0042254,GO:0043170,GO:0044085,GO:0044237,GO:0044238,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0071704,GO:0071840,GO:0090304,GO:1901360 - 0.0000000000000000000000000000000000000000000001604 171.0
DYD1_k127_3863262_18 Thioesterase-like superfamily K07107 - - 0.000000000000000000000000000000000000000004854 158.0
DYD1_k127_3863262_19 - - - - 0.0000000000000000000000009584 108.0
DYD1_k127_3863262_2 Homogentisate 12-dioxygenase K00451 - 1.13.11.5 1.877e-204 641.0
DYD1_k127_3863262_3 PFAM Aminotransferase, class I K14287 - 2.6.1.88 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001084 451.0
DYD1_k127_3863262_4 Bifunctional purine biosynthesis protein PurH K00602 - 2.1.2.3,3.5.4.10 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006712 411.0
DYD1_k127_3863262_5 Catalyzes the reversible phosphorylation of UMP to UDP K09903 - 2.7.4.22 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000727 373.0
DYD1_k127_3863262_6 PFAM Nitrilase cyanide hydratase and apolipoprotein N-acyltransferase K13566 - 3.5.1.3 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009003 340.0
DYD1_k127_3863262_7 ATPase (AAA superfamily) - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001798 333.0
DYD1_k127_3863262_8 Di-iron-containing protein involved in the repair of iron-sulfur clusters K07322 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003311 306.0
DYD1_k127_3863262_9 lipoprotein biosynthetic process K13292 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000212 304.0
DYD1_k127_3874542_0 Catalyzes the ATP-dependent amidation of deamido-NAD to form NAD. Uses L-glutamine as a nitrogen source K01950 - 6.3.5.1 2.23e-224 710.0
DYD1_k127_3874542_1 Catalyzes the condensation reaction of fatty acid synthesis by the addition to an acyl acceptor of two carbons from malonyl-ACP K09458 - 2.3.1.179 4.118e-216 676.0
DYD1_k127_3874542_10 MORN repeat variant - - - 0.00000000000000000000000000000000000000000000000001903 186.0
DYD1_k127_3874542_11 Carrier of the growing fatty acid chain in fatty acid biosynthesis K02078 GO:0000035,GO:0000036,GO:0003674,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005975,GO:0006082,GO:0006629,GO:0006631,GO:0006633,GO:0006643,GO:0006644,GO:0006664,GO:0006793,GO:0006796,GO:0008150,GO:0008152,GO:0008610,GO:0008654,GO:0009058,GO:0009245,GO:0009247,GO:0009311,GO:0009312,GO:0009987,GO:0016051,GO:0016053,GO:0019637,GO:0019752,GO:0019842,GO:0031177,GO:0032787,GO:0033218,GO:0036094,GO:0043167,GO:0043168,GO:0043436,GO:0044237,GO:0044238,GO:0044249,GO:0044255,GO:0044281,GO:0044283,GO:0044424,GO:0044444,GO:0044464,GO:0044620,GO:0046394,GO:0046467,GO:0046493,GO:0048037,GO:0051192,GO:0071704,GO:0072330,GO:0072341,GO:0090407,GO:0140104,GO:1901135,GO:1901137,GO:1901269,GO:1901271,GO:1901576,GO:1903509 - 0.000000000000000000000000000000000000005489 145.0
DYD1_k127_3874542_12 - - - - 0.00000000000000000000000000000001591 128.0
DYD1_k127_3874542_2 Belongs to the pyruvate kinase family K00873 - 2.7.1.40 1.923e-197 626.0
DYD1_k127_3874542_3 Helix-hairpin-helix motif - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004812 582.0
DYD1_k127_3874542_4 PFAM surface antigen variable number repeat - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006929 471.0
DYD1_k127_3874542_5 Fibronectin-binding protein A N-terminus (FbpA) - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003596 441.0
DYD1_k127_3874542_6 of the beta-lactamase superfamily I K06167 - 3.1.4.55 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002144 353.0
DYD1_k127_3874542_7 Transfers the N-acyl diglyceride group on what will become the N-terminal cysteine of membrane lipoproteins - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005017 329.0
DYD1_k127_3874542_8 Digests double-stranded RNA. Involved in the processing of primary rRNA transcript to yield the immediate precursors to the large and small rRNAs (23S and 16S). Processes some mRNAs, and tRNAs when they are encoded in the rRNA operon. Processes pre- crRNA and tracrRNA of type II CRISPR loci if present in the organism K03685 - 3.1.26.3 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000001054 287.0
DYD1_k127_3874542_9 photosystem II stabilization - - - 0.00000000000000000000000000000000000000000000000000004098 198.0
DYD1_k127_3876459_0 Catalyzes the attachment of proline to tRNA(Pro) in a two-step reaction proline is first activated by ATP to form Pro- AMP and then transferred to the acceptor end of tRNA(Pro) K01881 GO:0003674,GO:0003824,GO:0004812,GO:0004827,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006082,GO:0006139,GO:0006399,GO:0006412,GO:0006418,GO:0006433,GO:0006518,GO:0006520,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0016070,GO:0016874,GO:0016875,GO:0017101,GO:0019538,GO:0019752,GO:0032991,GO:0034641,GO:0034645,GO:0034660,GO:0043038,GO:0043039,GO:0043043,GO:0043170,GO:0043436,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044281,GO:0044424,GO:0044464,GO:0046483,GO:0071704,GO:0090304,GO:0140098,GO:0140101,GO:1901360,GO:1901564,GO:1901566,GO:1901576 6.1.1.15 1.917e-259 805.0
DYD1_k127_3876459_1 Catalyzes the cleavage of 2-amino-3-ketobutyrate to glycine and acetyl-CoA K00639 - 2.3.1.29 1.32e-221 691.0
DYD1_k127_3876459_10 Polysaccharide biosynthesis protein - - - 0.0000000000000000000000000000000000000000000000000000000005781 209.0
DYD1_k127_3876459_11 NfeD-like C-terminal, partner-binding - - - 0.00000000000000000000000000000000000005287 151.0
DYD1_k127_3876459_12 Catalyzes the specific phosphorylation of the 3-hydroxyl group of shikimic acid using ATP as a cosubstrate K00891 GO:0000287,GO:0003674,GO:0003824,GO:0004765,GO:0005488,GO:0006082,GO:0006520,GO:0006725,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0008652,GO:0009058,GO:0009072,GO:0009073,GO:0009987,GO:0016053,GO:0016301,GO:0016310,GO:0016740,GO:0016772,GO:0016773,GO:0019438,GO:0019632,GO:0019752,GO:0032787,GO:0043167,GO:0043169,GO:0043436,GO:0044237,GO:0044238,GO:0044249,GO:0044281,GO:0044283,GO:0046394,GO:0046872,GO:0071704,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576,GO:1901615 2.7.1.71 0.0000000000000000000000000000000000158 141.0
DYD1_k127_3876459_13 - - - - 0.000000001332 70.0
DYD1_k127_3876459_2 UPF0365 protein - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003529 489.0
DYD1_k127_3876459_3 DoxX family - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003651 482.0
DYD1_k127_3876459_4 PFAM NAD dependent epimerase dehydratase family - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008947 438.0
DYD1_k127_3876459_5 Catalyzes the condensation of 2 ATP molecules into cyclic di-AMP (c-di-AMP), a second messenger used to regulate differing processes in different bacteria - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002768 346.0
DYD1_k127_3876459_6 Catalyzes the condensation of para-aminobenzoate (pABA) with 6-hydroxymethyl-7,8-dihydropterin diphosphate (DHPt-PP) to form 7,8-dihydropteroate (H2Pte), the immediate precursor of folate derivatives K00796 - 2.5.1.15 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003338 346.0
DYD1_k127_3876459_7 PFAM Outer membrane protein transport protein (OMPP1 FadL TodX) - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003519 356.0
DYD1_k127_3876459_8 Domain of Unknown Function (DUF1599) - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000001614 287.0
DYD1_k127_3876459_9 protein kinase activity - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000005187 277.0
DYD1_k127_3907847_0 In eubacteria ppGpp (guanosine 3'-diphosphate 5-' diphosphate) is a mediator of the stringent response that coordinates a variety of cellular activities in response to changes in nutritional abundance K00951,K01139 - 2.7.6.5,3.1.7.2 0.0 1148.0
DYD1_k127_3907847_1 Belongs to the Fur family K03711 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000004611 271.0
DYD1_k127_3907847_2 Trigger factor K03545 - - 0.0000000000000000000000000000000000000000000000000000000000000000000002958 244.0
DYD1_k127_3907847_3 Plays an important role in the de novo pathway of purine nucleotide biosynthesis. Catalyzes the first committed step in the biosynthesis of AMP from IMP K01939 GO:0003674,GO:0003824,GO:0004019,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006139,GO:0006163,GO:0006164,GO:0006167,GO:0006725,GO:0006753,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009117,GO:0009123,GO:0009124,GO:0009126,GO:0009127,GO:0009150,GO:0009152,GO:0009156,GO:0009161,GO:0009165,GO:0009167,GO:0009168,GO:0009259,GO:0009260,GO:0009987,GO:0016874,GO:0016879,GO:0017144,GO:0018130,GO:0019438,GO:0019637,GO:0019693,GO:0034641,GO:0034654,GO:0044208,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0044424,GO:0044464,GO:0046033,GO:0046040,GO:0046390,GO:0046483,GO:0055086,GO:0071704,GO:0072521,GO:0072522,GO:0090407,GO:1901135,GO:1901137,GO:1901293,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576 6.3.4.4 0.0000000000000000000000000000000000000000000000000000000002941 204.0
DYD1_k127_3907847_4 Belongs to the anti-sigma-factor antagonist family K04749 - - 0.000000000000000000000000000000000006963 139.0
DYD1_k127_3919738_0 Belongs to the DEAD box helicase family K05592 - 3.6.4.13 1.67e-213 676.0
DYD1_k127_3919738_1 Phenylacetic acid catabolic protein K02609 - 1.14.13.149 4.761e-197 616.0
DYD1_k127_3919738_10 - - - - 0.00000000000141 72.0
DYD1_k127_3919738_2 Phenylacetic acid catabolic protein K02611 - 1.14.13.149 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004402 404.0
DYD1_k127_3919738_3 transcriptional regulator - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000001501 297.0
DYD1_k127_3919738_4 DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000002109 259.0
DYD1_k127_3919738_5 TIGRFAM RNA polymerase sigma factor, sigma-70 family K03088 - - 0.000000000000000000000000000000000000000000000000000000000000000000000001712 248.0
DYD1_k127_3919738_6 phenylacetate catabolic process K02610 - - 0.0000000000000000000000000000000000000000000000000000000000000000004141 234.0
DYD1_k127_3919738_7 Phenylacetate-CoA oxygenase K02612 - - 0.00000000000000000000000000000000000000000000000000000000004956 208.0
DYD1_k127_3919738_8 DinB superfamily - - - 0.00000000000000000000000000000000000001937 149.0
DYD1_k127_3919738_9 - - - - 0.0000000000000000000000000000008044 126.0
DYD1_k127_3950751_0 acetoacetyl-CoA K01907 - 6.2.1.16 4.225e-211 674.0
DYD1_k127_3950751_1 Belongs to the ribF family K11753 - 2.7.1.26,2.7.7.2 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001529 420.0
DYD1_k127_3950751_2 Belongs to the ABC-4 integral membrane protein family. FtsX subfamily K09811 GO:0005575,GO:0005618,GO:0005623,GO:0006928,GO:0008150,GO:0009274,GO:0009276,GO:0009605,GO:0009607,GO:0009615,GO:0009987,GO:0030312,GO:0030313,GO:0031975,GO:0040011,GO:0043207,GO:0044464,GO:0048870,GO:0050896,GO:0051179,GO:0051301,GO:0051674,GO:0051704,GO:0051707,GO:0071944,GO:0071976 - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005795 343.0
DYD1_k127_3950751_3 Catalyzes the dephosphorylation of undecaprenyl diphosphate (UPP). Confers resistance to bacitracin K06153 - 3.6.1.27 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008464 331.0
DYD1_k127_3950751_4 Responsible for synthesis of pseudouridine from uracil- 55 in the psi GC loop of transfer RNAs K03177 GO:0001522,GO:0003674,GO:0003824,GO:0006139,GO:0006396,GO:0006399,GO:0006400,GO:0006725,GO:0006807,GO:0008033,GO:0008150,GO:0008152,GO:0009451,GO:0009982,GO:0009987,GO:0010467,GO:0016070,GO:0016071,GO:0016556,GO:0016853,GO:0016866,GO:0034470,GO:0034641,GO:0034660,GO:0043170,GO:0043412,GO:0044237,GO:0044238,GO:0046483,GO:0071704,GO:0090304,GO:1901360,GO:1990481 5.4.99.25 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000003003 284.0
DYD1_k127_3950751_5 TIGRFAM Gliding motility-associated protein, GldC - - - 0.000000000000000000000000000000000000000000002796 166.0
DYD1_k127_3950751_6 PFAM TonB-dependent Receptor Plug - - - 0.000000000000000000000000000000000000000007007 158.0
DYD1_k127_3950751_8 Protein of unknown function (DUF3098) - - - 0.0000000000000000004848 88.0
DYD1_k127_3952968_0 Catalyzes the attachment of alanine to tRNA(Ala) in a two-step reaction alanine is first activated by ATP to form Ala- AMP and then transferred to the acceptor end of tRNA(Ala). Also edits incorrectly charged Ser-tRNA(Ala) and Gly-tRNA(Ala) via its editing domain K01872 GO:0003674,GO:0003824,GO:0004812,GO:0004813,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006082,GO:0006139,GO:0006396,GO:0006399,GO:0006400,GO:0006412,GO:0006418,GO:0006419,GO:0006518,GO:0006520,GO:0006725,GO:0006807,GO:0008033,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009451,GO:0009987,GO:0010467,GO:0016070,GO:0016597,GO:0016874,GO:0016875,GO:0019538,GO:0019752,GO:0031406,GO:0034470,GO:0034641,GO:0034645,GO:0034660,GO:0036094,GO:0043038,GO:0043039,GO:0043043,GO:0043167,GO:0043168,GO:0043170,GO:0043177,GO:0043412,GO:0043436,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044281,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0071704,GO:0090304,GO:0140098,GO:0140101,GO:1901360,GO:1901564,GO:1901566,GO:1901576 6.1.1.7 0.0 1182.0
DYD1_k127_3952968_1 ABC transporter K06158 - - 6.544e-281 875.0
DYD1_k127_3952968_10 PFAM alkyl hydroperoxide reductase Thiol specific antioxidant Mal allergen - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002166 366.0
DYD1_k127_3952968_11 Domain of unknown function (DUF4159) - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002151 354.0
DYD1_k127_3952968_12 PFAM Peptidase family M23 - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000008661 294.0
DYD1_k127_3952968_13 PFAM Cytidine and deoxycytidylate deaminase zinc-binding region K01493 - 3.5.4.12 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000199 278.0
DYD1_k127_3952968_14 peptidase M23 - - - 0.0000000000000000000000000000000000000000000000000000000000000462 225.0
DYD1_k127_3952968_15 - - - - 0.00000000000000000000000000000000000000000000000000000218 202.0
DYD1_k127_3952968_16 Protein of unknown function (DUF2911) - - - 0.0000000000000000000000000000000000000000000000000003689 190.0
DYD1_k127_3952968_17 transcriptional regulator - - - 0.0000000000000000000000000000000000000000000000002607 178.0
DYD1_k127_3952968_18 - - - - 0.0000000000000000000000000000003986 128.0
DYD1_k127_3952968_19 Protein of unknown function (DUF1800) - - - 0.00000000000000003935 82.0
DYD1_k127_3952968_2 Allows the formation of correctly charged Asn-tRNA(Asn) or Gln-tRNA(Gln) through the transamidation of misacylated Asp- tRNA(Asn) or Glu-tRNA(Gln) in organisms which lack either or both of asparaginyl-tRNA or glutaminyl-tRNA synthetases. The reaction takes place in the presence of glutamine and ATP through an activated phospho-Asp-tRNA(Asn) or phospho-Glu-tRNA(Gln) K02434 - 6.3.5.6,6.3.5.7 7.438e-215 676.0
DYD1_k127_3952968_20 - - - - 0.00000000000008062 73.0
DYD1_k127_3952968_21 - - - - 0.00002037 54.0
DYD1_k127_3952968_22 TonB dependent receptor K02014 - - 0.00007002 48.0
DYD1_k127_3952968_3 Glucose / Sorbosone dehydrogenase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002439 554.0
DYD1_k127_3952968_4 TIGRFAM DNA protecting protein DprA K04096 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002663 446.0
DYD1_k127_3952968_5 Bacterial capsule synthesis protein PGA_cap K07282 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005025 443.0
DYD1_k127_3952968_6 Catalyzes the reductive methylation of 2'-deoxyuridine- 5'-monophosphate (dUMP) to 2'-deoxythymidine-5'-monophosphate (dTMP) while utilizing 5,10-methylenetetrahydrofolate (mTHF) as the methyl donor and reductant in the reaction, yielding dihydrofolate (DHF) as a by-product. This enzymatic reaction provides an intracellular de novo source of dTMP, an essential precursor for DNA biosynthesis K00560 - 2.1.1.45 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008945 402.0
DYD1_k127_3952968_7 LVIVD repeat - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002523 407.0
DYD1_k127_3952968_8 Cell wall formation K00075 - 1.3.1.98 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002867 394.0
DYD1_k127_3952968_9 Isopropylmalate homocitrate citramalate synthase K01640 - 4.1.3.4 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001071 384.0
DYD1_k127_3958300_0 DNA-directed DNA polymerase K02337 - 2.7.7.7 0.0 1708.0
DYD1_k127_3958300_1 TIGRFAM succinate dehydrogenase or fumarate reductase, flavoprotein subunit K00239 - 1.3.5.1,1.3.5.4 0.0 1098.0
DYD1_k127_3958300_10 Catalyzes two steps in the biosynthesis of coenzyme A. In the first step cysteine is conjugated to 4'-phosphopantothenate to form 4-phosphopantothenoylcysteine, in the latter compound is decarboxylated to form 4'-phosphopantotheine K13038 - 4.1.1.36,6.3.2.5 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002321 557.0
DYD1_k127_3958300_11 PFAM 2Fe-2S iron-sulfur cluster binding domain K02613 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002595 556.0
DYD1_k127_3958300_12 OstA-like protein - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002569 561.0
DYD1_k127_3958300_13 PFAM Sodium sulfate symporter transmembrane region K14445 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001052 476.0
DYD1_k127_3958300_14 TIGRFAM succinate dehydrogenase and fumarate reductase iron-sulfur protein K00240 - 1.3.5.1,1.3.5.4 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000737 435.0
DYD1_k127_3958300_15 Ligates lysine onto the cytidine present at position 34 of the AUA codon-specific tRNA(Ile) that contains the anticodon CAU, in an ATP-dependent manner. Cytidine is converted to lysidine, thus changing the amino acid specificity of the tRNA from methionine to isoleucine K04075 - 6.3.4.19 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007138 376.0
DYD1_k127_3958300_16 Methyltransferase domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000411 361.0
DYD1_k127_3958300_17 Domain of unknown function (DUF4835) - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003253 357.0
DYD1_k127_3958300_18 Required for formate dehydrogenase (FDH) activity. Acts as a sulfur carrier protein that transfers sulfur from IscS to the molybdenum cofactor prior to its insertion into FDH K02379 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001209 355.0
DYD1_k127_3958300_19 TIGRFAM Outer membrane assembly lipoprotein YfiO K05807 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003089 319.0
DYD1_k127_3958300_2 Formate--tetrahydrofolate ligase K01938 GO:0003674,GO:0003824,GO:0004329,GO:0004477,GO:0004488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006082,GO:0006139,GO:0006144,GO:0006575,GO:0006725,GO:0006732,GO:0006760,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009108,GO:0009112,GO:0009113,GO:0009256,GO:0009257,GO:0009396,GO:0009987,GO:0016053,GO:0016491,GO:0016645,GO:0016646,GO:0016787,GO:0016810,GO:0016814,GO:0016874,GO:0016879,GO:0018130,GO:0019238,GO:0019438,GO:0019752,GO:0034641,GO:0042398,GO:0042440,GO:0042558,GO:0042559,GO:0043436,GO:0043603,GO:0043604,GO:0043648,GO:0043650,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0044283,GO:0044424,GO:0044464,GO:0046112,GO:0046148,GO:0046394,GO:0046483,GO:0046653,GO:0046654,GO:0051186,GO:0051188,GO:0055086,GO:0055114,GO:0071704,GO:0072521,GO:0072522,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576 6.3.4.3 1.14e-272 848.0
DYD1_k127_3958300_20 TIGRFAM succinate dehydrogenase (or fumarate reductase) cytochrome b subunit, b558 family K00241 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000006571 257.0
DYD1_k127_3958300_21 LPP20 lipoprotein - - - 0.0000000000000000000000000000000000000000000000000000000000000000000078 251.0
DYD1_k127_3958300_22 PFAM Sulfite exporter TauE SafE K07090 - - 0.0000000000000000000000000000000000000000000000000000000000000000001919 237.0
DYD1_k127_3958300_23 - - - - 0.000000000000000000000000000000000000000000000000000000000000000001409 234.0
DYD1_k127_3958300_24 - - - - 0.0000000000000000000000000000000000000000000000000000000000000000308 228.0
DYD1_k127_3958300_25 Peptidase family S41 - - - 0.00000000000000000000000000000000000000000000000000000000000000009276 233.0
DYD1_k127_3958300_26 Putative zinc- or iron-chelating domain K06940 - - 0.000000000000000000000000000000000000000000000000000000000000001248 222.0
DYD1_k127_3958300_27 Belongs to the UPF0312 family - - - 0.000000000000000000000000000000000000000000000000000000000001511 214.0
DYD1_k127_3958300_28 Specifically methylates the adenine in position 37 of tRNA(1)(Val) (anticodon cmo5UAC) K15460 - 2.1.1.223 0.0000000000000000000000000000000000000000000000000000000002442 211.0
DYD1_k127_3958300_29 - - - - 0.0000000000000000000000000000000000000000000000000000001147 202.0
DYD1_k127_3958300_3 PFAM peptidase M3A and M3B thimet oligopeptidase F K08602 - - 2.296e-263 822.0
DYD1_k127_3958300_30 Belongs to the thioredoxin family K03671 - - 0.000000000000000000000000000000000000000000000000002041 185.0
DYD1_k127_3958300_31 TIGRFAM RNA polymerase sigma factor, sigma-70 family K03088 - - 0.0000000000000000000000000000000000000000000000003388 181.0
DYD1_k127_3958300_32 transcriptional regulator - - - 0.0000000000000000000000000000000000000000001393 164.0
DYD1_k127_3958300_33 Promotes RNA polymerase assembly. Latches the N- and C- terminal regions of the beta' subunit thereby facilitating its interaction with the beta and alpha subunits - - - 0.000000000000000000000000000000000000000004414 156.0
DYD1_k127_3958300_34 - - - - 0.00000000000000000000000000000000000003361 147.0
DYD1_k127_3958300_35 - - - - 0.000000000000000000000000000003143 124.0
DYD1_k127_3958300_36 Domain of unknown function (DUF4440) - - - 0.00000000000000000000000000006982 126.0
DYD1_k127_3958300_37 PFAM RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) - - - 0.000000000000000000000000002211 113.0
DYD1_k127_3958300_38 - - - - 0.0000000000000005364 80.0
DYD1_k127_3958300_4 Molydopterin dinucleotide binding domain K00123 - 1.17.1.9 1.101e-227 732.0
DYD1_k127_3958300_5 NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain K00335 - 1.6.5.3 2.229e-223 704.0
DYD1_k127_3958300_6 Belongs to the lyase 1 family. Adenylosuccinate lyase subfamily K01756 - 4.3.2.2 3.437e-205 650.0
DYD1_k127_3958300_7 Beta-lactamase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006383 606.0
DYD1_k127_3958300_8 May be involved in recombinational repair of damaged DNA K03631 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009036 593.0
DYD1_k127_3958300_9 Catalyzes the reversible oxidation of malate to oxaloacetate K00024 - 1.1.1.37 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001266 562.0
DYD1_k127_3992660_0 Catalyzes the acyloin condensation reaction between C atoms 2 and 3 of pyruvate and glyceraldehyde 3-phosphate to yield 1-deoxy-D-xylulose-5-phosphate (DXP) K01662 - 2.2.1.7 0.0 1122.0
DYD1_k127_3992660_1 PFAM Prolyl oligopeptidase, N-terminal beta-propeller domain K01322 GO:0005575,GO:0005623,GO:0042597,GO:0044464 3.4.21.26 0.0 1028.0
DYD1_k127_3992660_10 TPM domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002804 335.0
DYD1_k127_3992660_11 Outer membrane efflux protein - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002635 317.0
DYD1_k127_3992660_12 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000004818 252.0
DYD1_k127_3992660_13 Alpha/beta hydrolase family - - - 0.000000000000000000000000000000000000000000000000000000000001446 218.0
DYD1_k127_3992660_14 TIGRFAM endoribonuclease L-PSP K09022 - 3.5.99.10 0.0000000000000000000000000000000000000000000000000003762 186.0
DYD1_k127_3992660_15 PFAM Acetyltransferase (GNAT) family - - - 0.00000000000000000000000000000000000000000000000001548 183.0
DYD1_k127_3992660_16 NnrU protein - - - 0.0000000000000000000000000000000000001269 148.0
DYD1_k127_3992660_17 Domain of unknown function (DUF4286) - - - 0.000000000000000000000000000000000001618 140.0
DYD1_k127_3992660_18 - - - - 0.0000000000000000000003952 98.0
DYD1_k127_3992660_19 - - - - 0.00000000000001605 76.0
DYD1_k127_3992660_2 Facilitates transcription termination by a mechanism that involves Rho binding to the nascent RNA, activation of Rho's RNA-dependent ATPase activity, and release of the mRNA from the DNA template K03628 - - 4.387e-257 801.0
DYD1_k127_3992660_3 Catalyzes the first step in hexosamine metabolism, converting fructose-6P into glucosamine-6P using glutamine as a nitrogen source K00820 GO:0003674,GO:0003824,GO:0004360,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006002,GO:0006040,GO:0006047,GO:0006139,GO:0006464,GO:0006486,GO:0006487,GO:0006725,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0008483,GO:0009058,GO:0009059,GO:0009100,GO:0009101,GO:0009225,GO:0009987,GO:0016740,GO:0016769,GO:0019538,GO:0019637,GO:0034641,GO:0034645,GO:0036211,GO:0043170,GO:0043412,GO:0043413,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044281,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0055086,GO:0070085,GO:0070548,GO:0071704,GO:1901135,GO:1901137,GO:1901360,GO:1901564,GO:1901566,GO:1901576 2.6.1.16 1.554e-237 739.0
DYD1_k127_3992660_4 Catalyzes the attachment of glutamate to tRNA(Glu) in a two-step reaction glutamate is first activated by ATP to form Glu-AMP and then transferred to the acceptor end of tRNA(Glu) K01885 - 6.1.1.17 6.453e-213 672.0
DYD1_k127_3992660_5 TIGRFAM dihydroorotase, multifunctional complex type K01465 - 3.5.2.3 3.58e-207 652.0
DYD1_k127_3992660_6 tRNA synthetase class II core domain (G, H, P, S and T) K01875 - 6.1.1.11 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002707 593.0
DYD1_k127_3992660_7 Alanine dehydrogenase PNT, N-terminal domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001732 529.0
DYD1_k127_3992660_8 Belongs to the DEAD box helicase family K11927 - 3.6.4.13 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000657 528.0
DYD1_k127_3992660_9 Participates in chromosomal partition during cell division. May act via the formation of a condensin-like complex containing Smc and ScpB that pull DNA away from mid-cell into both cell halves K05896 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001256 349.0
DYD1_k127_4070753_0 Glycosyl hydrolase family 3 N terminal domain K01207 - 3.2.1.52 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004587 439.0
DYD1_k127_4070753_1 D-alanyl-D-alanine carboxypeptidase (penicillin-binding protein 4) K07259 - 3.4.16.4 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002015 327.0
DYD1_k127_4070753_2 N-formylglutamate amidohydrolase - - - 0.00000000000000006889 81.0
DYD1_k127_4110010_0 AAA domain, putative AbiEii toxin, Type IV TA system - - - 2.604e-315 975.0
DYD1_k127_4115388_0 The UvrABC repair system catalyzes the recognition and processing of DNA lesions. UvrA is an ATPase and a DNA-binding protein. A damage recognition complex composed of 2 UvrA and 2 UvrB subunits scans DNA for abnormalities. When the presence of a lesion has been verified by UvrB, the UvrA molecules dissociate K03701 - - 0.0 1246.0
DYD1_k127_4115388_1 Belongs to the Glu Leu Phe Val dehydrogenases family K00262 GO:0003674,GO:0003824,GO:0004353,GO:0004354,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006082,GO:0006520,GO:0006536,GO:0006537,GO:0006807,GO:0008150,GO:0008152,GO:0008652,GO:0009058,GO:0009064,GO:0009084,GO:0009986,GO:0009987,GO:0016053,GO:0016491,GO:0016638,GO:0016639,GO:0019752,GO:0043436,GO:0043648,GO:0043650,GO:0044237,GO:0044238,GO:0044249,GO:0044281,GO:0044283,GO:0044424,GO:0044444,GO:0044464,GO:0046394,GO:0055114,GO:0071704,GO:1901564,GO:1901566,GO:1901576,GO:1901605,GO:1901607 1.4.1.4 1.206e-229 717.0
DYD1_k127_4115388_10 Ribose 5-phosphate isomerase K01808 - 5.3.1.6 0.00000000000000000000000000000000000000000000000000000000000000004841 225.0
DYD1_k127_4115388_11 Membrane K08988 - - 0.000000000000000000000000000000000000000000000000000000000004041 214.0
DYD1_k127_4115388_12 Protein of unknown function (DUF456) K09793 - - 0.000000000000000000000000000000000000000000000000001297 186.0
DYD1_k127_4115388_13 Transporter K07112 - - 0.00000000000000000000000000000000000000000000000000498 187.0
DYD1_k127_4115388_14 Domain of unknown function (DUF1330) - - - 0.00000000000000000000000000000000000000009654 152.0
DYD1_k127_4115388_15 One of several proteins that assist in the late maturation steps of the functional core of the 30S ribosomal subunit. Associates with free 30S ribosomal subunits (but not with 30S subunits that are part of 70S ribosomes or polysomes). Required for efficient processing of 16S rRNA. May interact with the 5'-terminal helix region of 16S rRNA K02834 - - 0.000000000000000000000000000000000000000173 153.0
DYD1_k127_4115388_16 Periplasmic Protein - - - 0.0000000000000000000000000000000000000006776 158.0
DYD1_k127_4115388_17 SnoaL-like domain - - - 0.00000000000000004277 88.0
DYD1_k127_4115388_18 Domain of Unknown Function (DUF350) - - - 0.000000000000009863 81.0
DYD1_k127_4115388_2 Catalyzes the reversible interconversion of serine and glycine with tetrahydrofolate (THF) serving as the one-carbon carrier. This reaction serves as the major source of one-carbon groups required for the biosynthesis of purines, thymidylate, methionine, and other important biomolecules. Also exhibits THF- independent aldolase activity toward beta-hydroxyamino acids, producing glycine and aldehydes, via a retro-aldol mechanism K00600 - 2.1.2.1 6.25e-227 709.0
DYD1_k127_4115388_3 PFAM Helicase conserved C-terminal domain K08282 - 2.7.11.1 5.477e-194 617.0
DYD1_k127_4115388_4 ABC-type transport system involved in lipoprotein release permease component K09808,K09815 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001183 461.0
DYD1_k127_4115388_5 Permeases of the major facilitator superfamily - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006772 428.0
DYD1_k127_4115388_6 Part of the twin-arginine translocation (Tat) system that transports large folded proteins containing a characteristic twin-arginine motif in their signal peptide across membranes K03118 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006509 341.0
DYD1_k127_4115388_7 YeeE YedE family protein K07112 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000004251 254.0
DYD1_k127_4115388_8 Beta-propeller domains of methanol dehydrogenase type K06872 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000006071 259.0
DYD1_k127_4115388_9 - - - - 0.0000000000000000000000000000000000000000000000000000000000000000002641 246.0
DYD1_k127_4129649_0 3-hydroxyacyl-CoA dehydrogenase K07516 - 1.1.1.35 0.0 1288.0
DYD1_k127_4129649_1 PFAM Alpha amylase, catalytic K01176,K01208 GO:0000272,GO:0000287,GO:0001871,GO:0003674,GO:0003824,GO:0004553,GO:0004556,GO:0005488,GO:0005509,GO:0005575,GO:0005975,GO:0005976,GO:0005982,GO:0005983,GO:0006073,GO:0008150,GO:0008152,GO:0009056,GO:0009057,GO:0009251,GO:0009987,GO:0016020,GO:0016052,GO:0016160,GO:0016787,GO:0016798,GO:0019867,GO:0030246,GO:0030247,GO:0043167,GO:0043169,GO:0043170,GO:0044042,GO:0044237,GO:0044238,GO:0044247,GO:0044248,GO:0044260,GO:0044262,GO:0044264,GO:0044275,GO:0046872,GO:0071704,GO:1901575,GO:2001070 3.2.1.1,3.2.1.133,3.2.1.135,3.2.1.54 3.255e-202 642.0
DYD1_k127_4129649_2 Belongs to the thiolase family K00632 - 2.3.1.16 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003783 591.0
DYD1_k127_4129649_3 Sugar (and other) transporter K08138 - - 0.000000000000000000000000000000000000000000000000000000000277 204.0
DYD1_k127_4129649_4 Transcriptional regulator, MarR family - - - 0.000000000000000000000000000000000000000000000000000000003922 202.0
DYD1_k127_4129649_5 23S rRNA-intervening sequence protein - - - 0.0000000000000000000000000000000000000000000000005641 177.0
DYD1_k127_4129649_6 acyl-CoA dehydrogenase - - - 0.000000000000000000000000000001891 121.0
DYD1_k127_414574_0 AsmA-like C-terminal region - - - 0.0 1097.0
DYD1_k127_414574_1 Belongs to the ompA family - - - 5.367e-285 889.0
DYD1_k127_414574_10 Belongs to the ompA family - - - 0.00000000000000000000000000000000000000000000000000007453 195.0
DYD1_k127_414574_11 - - - - 0.0000000000000000000000003834 114.0
DYD1_k127_414574_2 Patatin-like phospholipase K07001 - - 4.648e-279 876.0
DYD1_k127_414574_3 Cytochrome c biogenesis protein transmembrane region K04084 - 1.8.1.8 1.183e-277 869.0
DYD1_k127_414574_4 Involved in the TCA cycle. Catalyzes the stereospecific interconversion of fumarate to L-malate K01679 - 4.2.1.2 3.517e-262 812.0
DYD1_k127_414574_5 PFAM Peptidase family M20 M25 M40 - - - 1.332e-230 719.0
DYD1_k127_414574_6 Peptidase family M28 - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000144 511.0
DYD1_k127_414574_7 PFAM Peptidase family M23 - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009337 500.0
DYD1_k127_414574_8 Membrane - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003255 386.0
DYD1_k127_414574_9 Conserved hypothetical protein 698 - - - 0.000000000000000000000000000000000000000000000000000000000005327 213.0
DYD1_k127_4173178_0 AAA domain, putative AbiEii toxin, Type IV TA system - - - 0.0 1162.0
DYD1_k127_4173178_1 - - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004747 406.0
DYD1_k127_4174636_0 FtsX-like permease family - - - 6.778e-318 990.0
DYD1_k127_4174636_1 Membrane dipeptidase (Peptidase family M19) - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004046 330.0
DYD1_k127_4174636_2 Transport of potassium into the cell K03549 - - 0.00000000000000000000000000000000000000000000000000000000009394 210.0
DYD1_k127_4174636_3 Putative auto-transporter adhesin, head GIN domain - - - 0.000000000000000000000000000000000000000000000000000001262 200.0
DYD1_k127_4216970_0 PFAM Glutamyl glutaminyl-tRNA synthetase, class Ic, catalytic domain K01886 - 6.1.1.18 1.16e-277 861.0
DYD1_k127_4216970_1 Asparagine synthase K01953 - 6.3.5.4 2.051e-274 856.0
DYD1_k127_4216970_10 Cytochrome c - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000004521 302.0
DYD1_k127_4216970_11 Oxidoreductase family, NAD-binding Rossmann fold - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000002413 286.0
DYD1_k127_4216970_12 YjgF/chorismate_mutase-like, putative endoribonuclease - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000482 247.0
DYD1_k127_4216970_13 Participates in the control of copper homeostasis K06201 - - 0.0000000000000000000000000000000000000000000000000000000000000000000001059 246.0
DYD1_k127_4216970_14 COG3209 Rhs family protein - - - 0.000000000000000000000000000000000000000000000000000000000000000005118 239.0
DYD1_k127_4216970_15 Transposase IS200 like - - - 0.0000000000000000000000000000000000000000000000000000000000003644 214.0
DYD1_k127_4216970_16 Cell wall-associated hydrolase (invasion-associated protein) K13695 - - 0.00000000000000000000000000000000000000000000000000000000001878 211.0
DYD1_k127_4216970_17 - - - - 0.0000000000000000000000000000000000000000000000000000000002547 203.0
DYD1_k127_4216970_18 - - - - 0.0000000000000000000000000000000000000000000000000000000425 203.0
DYD1_k127_4216970_19 Universal stress protein family - - - 0.0000000000000000000000000000000000000000006035 168.0
DYD1_k127_4216970_2 Outer membrane protein beta-barrel family - - - 7.209e-268 854.0
DYD1_k127_4216970_20 Rieske [2Fe-2S] domain K02636 - 1.10.9.1 0.000000000000000000000000000000000008523 140.0
DYD1_k127_4216970_21 DinB superfamily - - - 0.0000000000000000000000000000000009151 138.0
DYD1_k127_4216970_22 helix_turn_helix, arabinose operon control protein - - - 0.000000000000000000000000006856 122.0
DYD1_k127_4216970_23 - - - - 0.000000000000000000000007359 104.0
DYD1_k127_4216970_24 LytTr DNA-binding domain - - - 0.000000000006767 75.0
DYD1_k127_4216970_3 FAD linked oxidases, C-terminal domain K00102,K00104 - 1.1.2.4,1.1.3.15 2.27e-210 663.0
DYD1_k127_4216970_4 sister chromatid segregation - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002716 552.0
DYD1_k127_4216970_5 Thiol oxidoreductase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007813 544.0
DYD1_k127_4216970_6 Repeat domain in Vibrio, Colwellia, Bradyrhizobium and Shewanella - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000132 505.0
DYD1_k127_4216970_7 PFAM peptidase T2 asparaginase 2 K01444,K13051 GO:0005575,GO:0005623,GO:0042597,GO:0044464 3.4.19.5,3.5.1.26 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002598 449.0
DYD1_k127_4216970_8 Histidine kinase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006565 421.0
DYD1_k127_4216970_9 LytTr DNA-binding domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002309 312.0
DYD1_k127_4250265_0 glutamate synthase K00265,K00284 - 1.4.1.13,1.4.1.14,1.4.7.1 0.0 2107.0
DYD1_k127_4250265_1 TIGRFAM glutamate synthases, NADH NADPH, small subunit K00266 - 1.4.1.13,1.4.1.14 2.918e-210 664.0
DYD1_k127_4250265_2 Ammonium Transporter Family K03320 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003215 570.0
DYD1_k127_4250265_3 Glycosyl transferases group 1 - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003121 408.0
DYD1_k127_4250265_4 Catalyzes the transfer of a dimethylallyl group onto the adenine at position 37 in tRNAs that read codons beginning with uridine, leading to the formation of N6-(dimethylallyl)adenosine (i(6)A) K00791 GO:0003674,GO:0003824,GO:0006139,GO:0006396,GO:0006399,GO:0006400,GO:0006725,GO:0006807,GO:0008033,GO:0008150,GO:0008152,GO:0009451,GO:0009987,GO:0010467,GO:0016070,GO:0016740,GO:0016765,GO:0034470,GO:0034641,GO:0034660,GO:0043170,GO:0043412,GO:0044237,GO:0044238,GO:0046483,GO:0052381,GO:0071704,GO:0090304,GO:0140098,GO:0140101,GO:1901360 2.5.1.75 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003283 344.0
DYD1_k127_4250265_5 WD domain, G-beta repeat - - - 0.0000000000000000000000000000000000000000000000000000000004098 219.0
DYD1_k127_4250265_6 TIR domain - - - 0.000000001654 70.0
DYD1_k127_4349468_0 Biotin-lipoyl like - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002934 507.0
DYD1_k127_4349468_1 PFAM ABC transporter - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002978 460.0
DYD1_k127_4349468_2 PFAM Outer membrane efflux protein - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007122 410.0
DYD1_k127_4349468_3 Flavin containing amine oxidoreductase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001413 345.0
DYD1_k127_4349468_4 ATPase kinase involved in NAD metabolism - - - 0.0000000000000000000000000000000000000000000000000000000528 200.0
DYD1_k127_4349468_5 Transmembrane secretion effector - - - 0.00000000000000000000000001052 112.0
DYD1_k127_4382284_0 Peptidase dimerisation domain K01439,K13049 - 3.5.1.18 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002707 518.0
DYD1_k127_4382284_1 Alkyl hydroperoxide reductase Thiol specific antioxidant Mal allergen - - - 0.000000000000000000000000000004016 123.0
DYD1_k127_4382284_2 8-oxoguanine DNA glycosylase K01247,K13529 - 3.2.2.21 0.00000000000000000000000009633 109.0
DYD1_k127_4382284_3 Metal binding domain of Ada - - - 0.00000000000000000000008322 99.0
DYD1_k127_4386794_0 Part of the phosphoribosylformylglycinamidine synthase complex involved in the purines biosynthetic pathway. Catalyzes the ATP-dependent conversion of formylglycinamide ribonucleotide (FGAR) and glutamine to yield formylglycinamidine ribonucleotide (FGAM) and glutamate. The FGAM synthase complex is composed of three subunits. PurQ produces an ammonia molecule by converting glutamine to glutamate. PurL transfers the ammonia molecule to FGAR to form FGAM in an ATP-dependent manner. PurS interacts with PurQ and PurL and is thought to assist in the transfer of the ammonia molecule from PurQ to PurL K01952 - 6.3.5.3 0.0 1537.0
DYD1_k127_4386794_1 Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family - - - 0.0 1474.0
DYD1_k127_4386794_2 Calcineurin-like phosphoesterase superfamily domain K07098 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000248 555.0
DYD1_k127_4386794_3 PFAM Aldehyde dehydrogenase K13877 - 1.2.1.26 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004374 549.0
DYD1_k127_4386794_4 Belongs to the DapA family K01714,K21062 - 3.5.4.22,4.3.3.7 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002332 453.0
DYD1_k127_4386794_5 PFAM Outer membrane efflux protein - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003767 418.0
DYD1_k127_4386794_6 Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001503 373.0
DYD1_k127_4386794_7 PFAM Bacterial regulatory proteins, tetR family - - - 0.000000000000000000000000000000000000000000000000000000000000000000000004889 249.0
DYD1_k127_4386794_8 alpha/beta hydrolase fold - - - 0.00000000000000000000000000000000000000000000000000000000000000000000008427 252.0
DYD1_k127_4386794_9 TIGRFAM RNA polymerase sigma factor, sigma-70 family - - - 0.0000000000000000000000000000000000000000000000000002932 190.0
DYD1_k127_4398931_0 permease - - - 8.538e-282 887.0
DYD1_k127_4398931_1 Belongs to the proline racemase family K12658 - 5.1.1.8 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001615 580.0
DYD1_k127_4398931_2 PFAM FAD dependent oxidoreductase K00285 - 1.4.5.1 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003852 485.0
DYD1_k127_4398931_3 RNA recognition motif - - - 0.0000000000000000000000000000002231 125.0
DYD1_k127_4398931_4 PFAM Aldehyde dehydrogenase K13877 - 1.2.1.26 0.00000000000000000000000001016 109.0
DYD1_k127_4398931_5 Ketosteroid K06893 - - 0.0000000000002624 70.0
DYD1_k127_4411852_0 Tricorn protease C1 domain K08676 - - 0.0 1400.0
DYD1_k127_4411852_1 Nitrous oxide reductase K00376 - 1.7.2.4 0.0 1060.0
DYD1_k127_4411852_10 PFAM Cys Met metabolism PLP-dependent enzyme K01739,K01758,K01760 - 2.5.1.48,4.4.1.1,4.4.1.8 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003891 434.0
DYD1_k127_4411852_11 Associates with the EF-Tu.GDP complex and induces the exchange of GDP to GTP. It remains bound to the aminoacyl-tRNA.EF- Tu.GTP complex up to the GTP hydrolysis stage on the ribosome K02357 GO:0003674,GO:0003676,GO:0003723,GO:0003746,GO:0005488,GO:0006412,GO:0006414,GO:0006518,GO:0006807,GO:0008135,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0019538,GO:0034641,GO:0034645,GO:0043043,GO:0043170,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0071704,GO:0097159,GO:1901363,GO:1901564,GO:1901566,GO:1901576 - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001262 427.0
DYD1_k127_4411852_12 Belongs to the glutaminase family K01425 - 3.5.1.2 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003934 404.0
DYD1_k127_4411852_13 Belongs to the universal ribosomal protein uS2 family K02967 GO:0003674,GO:0003735,GO:0005198,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0006412,GO:0006518,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0015935,GO:0019538,GO:0022626,GO:0022627,GO:0032991,GO:0034641,GO:0034645,GO:0043043,GO:0043170,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:0071704,GO:1901564,GO:1901566,GO:1901576,GO:1990904 - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005998 388.0
DYD1_k127_4411852_14 Converts alpha-aldose to the beta-anomer K01785 - 5.1.3.3 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001161 379.0
DYD1_k127_4411852_15 Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain K07658 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002104 366.0
DYD1_k127_4411852_16 PFAM Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase K07636 - 2.7.13.3 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001471 364.0
DYD1_k127_4411852_17 - - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003726 358.0
DYD1_k127_4411852_18 Putative aminopeptidase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003545 351.0
DYD1_k127_4411852_19 lipoprotein involved in nitrous oxide reduction K19342 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005798 338.0
DYD1_k127_4411852_2 ABC transporter - - - 4.281e-309 955.0
DYD1_k127_4411852_20 TIGRFAM pseudouridine synthase, RluA family K06179,K06180 - 5.4.99.23,5.4.99.24 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000011 304.0
DYD1_k127_4411852_21 Catalyzes the formation of 4-diphosphocytidyl-2-C- methyl-D-erythritol from CTP and 2-C-methyl-D-erythritol 4- phosphate (MEP) K00991 GO:0003674,GO:0003824,GO:0016740,GO:0016772,GO:0016779,GO:0050518,GO:0070567 2.7.7.60 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000005438 289.0
DYD1_k127_4411852_22 Dioxygenase K00449 - 1.13.11.3 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000001579 279.0
DYD1_k127_4411852_23 COGs COG0664 cAMP-binding protein - catabolite gene activator and regulatory subunit of cAMP-dependent protein kinase K01420 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000194 270.0
DYD1_k127_4411852_24 - - - - 0.000000000000000000000000000000000000000000000000000000000000000000006039 243.0
DYD1_k127_4411852_25 Cyclic nucleotide-monophosphate binding domain - - - 0.0000000000000000000000000000000000000000000000000000000000003799 219.0
DYD1_k127_4411852_26 This protein is one of the early assembly proteins of the 50S ribosomal subunit, although it is not seen to bind rRNA by itself. It is important during the early stages of 50S assembly K02871 - - 0.0000000000000000000000000000000000000000000000000000000005567 206.0
DYD1_k127_4411852_27 Bacterial lipid A biosynthesis acyltransferase K02517 - 2.3.1.241 0.00000000000000000000000000000000000000000000000000000001439 203.0
DYD1_k127_4411852_28 PFAM cytochrome c - - - 0.00000000000000000000000000000000000000000000000002423 183.0
DYD1_k127_4411852_29 Belongs to the universal ribosomal protein uS9 family K02996 GO:0000462,GO:0003674,GO:0003676,GO:0003723,GO:0003735,GO:0005198,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0006139,GO:0006364,GO:0006396,GO:0006412,GO:0006518,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0015935,GO:0016070,GO:0016072,GO:0019538,GO:0022613,GO:0022626,GO:0022627,GO:0030490,GO:0032991,GO:0034470,GO:0034641,GO:0034645,GO:0034660,GO:0042254,GO:0042274,GO:0043043,GO:0043170,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043603,GO:0043604,GO:0044085,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:0046483,GO:0071704,GO:0071840,GO:0090304,GO:0097159,GO:1901360,GO:1901363,GO:1901564,GO:1901566,GO:1901576,GO:1990904 - 0.00000000000000000000000000000000000000000000006447 171.0
DYD1_k127_4411852_3 Alpha-amylase domain K01182,K05343 - 3.2.1.1,3.2.1.10,5.4.99.16 1.505e-273 851.0
DYD1_k127_4411852_30 Protein of unknown function (DUF2795) - - - 0.0000000000000000000000000000000000000000003734 157.0
DYD1_k127_4411852_31 - - - - 0.000000000000000000000000000000000000000001983 159.0
DYD1_k127_4411852_32 Acid phosphatase homologues - - - 0.000000000000000000000000000000000000002964 160.0
DYD1_k127_4411852_33 PFAM Rhodanese-like domain - - - 0.000000000000000000000000000000000000003789 147.0
DYD1_k127_4411852_34 DinB family - - - 0.0000000000000000000000000000000000005386 145.0
DYD1_k127_4411852_35 Putative zinc ribbon domain - - - 0.0000000000000000000000000000005428 123.0
DYD1_k127_4411852_36 PFAM Rhodanese-like domain - - - 0.0000000000000000000000000007977 115.0
DYD1_k127_4411852_37 Domain of unknown function (DUF4010) - - - 0.000000000000000000000000001813 127.0
DYD1_k127_4411852_38 COG3420 Nitrous oxidase accessory protein K07218 - - 0.00000000000000000001908 94.0
DYD1_k127_4411852_39 TfoX N-terminal domain - - - 0.0000000005694 61.0
DYD1_k127_4411852_4 Prolyl oligopeptidase family K01303 - 3.4.19.1 1.641e-213 682.0
DYD1_k127_4411852_5 ABC-type antimicrobial peptide transport system, permease component K02004 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003504 590.0
DYD1_k127_4411852_6 Can catalyze the hydrolysis of ATP in the presence of single-stranded DNA, the ATP-dependent uptake of single-stranded DNA by duplex DNA, and the ATP-dependent hybridization of homologous single-stranded DNAs. It interacts with LexA causing its activation and leading to its autocatalytic cleavage K03553 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004427 585.0
DYD1_k127_4411852_7 Transfers and isomerizes the ribose moiety from AdoMet to the 7-aminomethyl group of 7-deazaguanine (preQ1-tRNA) to give epoxyqueuosine (oQ-tRNA) K07568 - 2.4.99.17 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007546 564.0
DYD1_k127_4411852_8 FAD dependent oxidoreductase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001859 528.0
DYD1_k127_4411852_9 Peptidase dimerisation domain K01295 - 3.4.17.11 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001432 519.0
DYD1_k127_4419311_0 ASPIC UnbV domain protein - - - 0.0 1795.0
DYD1_k127_4419311_1 ASPIC and UnbV - - - 0.0 1598.0
DYD1_k127_4419311_10 - - - - 0.000000000000003992 84.0
DYD1_k127_4419311_2 PFAM ASPIC and UnbV - - - 0.0 1210.0
DYD1_k127_4419311_3 Glycosyl hydrolase family 65, N-terminal domain - - - 0.0 1032.0
DYD1_k127_4419311_4 TonB-dependent Receptor Plug Domain - - - 2.617e-249 798.0
DYD1_k127_4419311_5 PAP2 superfamily - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004184 597.0
DYD1_k127_4419311_6 SusD family - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001299 454.0
DYD1_k127_4419311_7 PFAM Bacterial transcription activator, effector binding domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002734 346.0
DYD1_k127_4419311_8 Domain of unknown function (DUF4249) - - - 0.00000000000000000000000000000000000000009919 166.0
DYD1_k127_4419311_9 Large extracellular alpha-helical protein - - - 0.0000000000000000000884 102.0
DYD1_k127_443068_0 Malate/L-lactate dehydrogenase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002038 509.0
DYD1_k127_443068_2 NAD-dependent lysine deacetylase and desuccinylase that specifically removes acetyl and succinyl groups on target proteins. Modulates the activities of several proteins which are inactive in their acylated form K12410 - - 0.00000000000000000000000000000000000000000000000000000000000000002831 227.0
DYD1_k127_443068_3 Thioredoxin-like - - - 0.00000000000000000000000000000000000000000009656 166.0
DYD1_k127_443068_4 Excinuclease ABC subunit C - - - 0.0000000000000000000000000000001245 127.0
DYD1_k127_4458354_0 Protein of unknown function (DUF3500) - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002734 518.0
DYD1_k127_4458354_1 Peptidase family S51 K13282 - 3.4.15.6 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000514 351.0
DYD1_k127_4458354_2 PFAM M42 glutamyl aminopeptidase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006452 329.0
DYD1_k127_4458354_3 - - - - 0.0000000000000000000000000000000000000000000000004147 183.0
DYD1_k127_4458354_4 - - - - 0.0000000000000000003143 93.0
DYD1_k127_4458354_5 lactoylglutathione lyase activity K01759 - 4.4.1.5 0.0000000000000006559 81.0
DYD1_k127_4458799_0 Cell division protein that is involved in the assembly of the Z ring. May serve as a membrane anchor for the Z ring K03590 - - 2.293e-236 735.0
DYD1_k127_4458799_1 Membrane-bound serine protease (ClpP class) K07403 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000963 577.0
DYD1_k127_4458799_10 Cell division protein K03589 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000003212 266.0
DYD1_k127_4458799_11 - - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000001646 261.0
DYD1_k127_4458799_12 NUDIX domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000309 256.0
DYD1_k127_4458799_13 Reversibly transfers an adenylyl group from ATP to 4'- phosphopantetheine, yielding dephospho-CoA (dPCoA) and pyrophosphate K00954 - 2.7.7.3 0.00000000000000000000000000000000000000000000000000000000000000000000004685 242.0
DYD1_k127_4458799_14 Cell wall formation. Catalyzes the transfer of a GlcNAc subunit on undecaprenyl-pyrophosphoryl-MurNAc-pentapeptide (lipid intermediate I) to form undecaprenyl-pyrophosphoryl-MurNAc- (pentapeptide)GlcNAc (lipid intermediate II) K02563 - 2.4.1.227 0.0000000000000000000000000000000000000000000004526 169.0
DYD1_k127_4458799_15 Nudix hydrolase K03574 - 3.6.1.55 0.00000000000000000000000000000000000000001468 158.0
DYD1_k127_4458799_16 Protein of unknown function (DUF1573) - - - 0.000000000000000000000000000000001345 134.0
DYD1_k127_4458799_17 small membrane protein - - - 0.000000000000000000000000000004234 124.0
DYD1_k127_4458799_2 Belongs to the MurCDEF family K01924 - 6.3.2.8 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006252 533.0
DYD1_k127_4458799_3 Essential cell division protein that forms a contractile ring structure (Z ring) at the future cell division site. The regulation of the ring assembly controls the timing and the location of cell division. One of the functions of the FtsZ ring is to recruit other cell division proteins to the septum to produce a new cell wall between the dividing cells. Binds GTP and shows GTPase activity K03531 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008987 445.0
DYD1_k127_4458799_4 Serine aminopeptidase, S33 - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008082 381.0
DYD1_k127_4458799_5 TIGRFAM TIGR02757 family protein - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003237 373.0
DYD1_k127_4458799_6 Protein of unknown function (DUF3822) - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007025 345.0
DYD1_k127_4458799_7 Activates KDO (a required 8-carbon sugar) for incorporation into bacterial lipopolysaccharide in Gram-negative bacteria K00979 - 2.7.7.38 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008657 319.0
DYD1_k127_4458799_8 Catalyzes the transfer of a ribosyl phosphate group from 5-phosphoribose 1-diphosphate to orotate, leading to the formation of orotidine monophosphate (OMP) K00762,K13421 - 2.4.2.10,4.1.1.23 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000001296 291.0
DYD1_k127_4458799_9 PFAM LysM domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000003791 273.0
DYD1_k127_4470364_0 Required for chromosome condensation and partitioning K03529 - - 0.0 1544.0
DYD1_k127_4470364_1 PFAM Oxidoreductase family, NAD-binding Rossmann fold - - - 1.237e-201 636.0
DYD1_k127_4470364_2 Peptidase dimerisation domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002112 471.0
DYD1_k127_4470364_3 TIGRFAM competence protein ComEA helix-hairpin-helix repeat region K06959 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007373 398.0
DYD1_k127_4470364_4 Acetyltransferase (GNAT) domain - - - 0.000000000000000000000000000000000000000000000000000000000002184 213.0
DYD1_k127_4470364_5 Protein of unknown function (DUF1223) - - - 0.000000000000000000000000000000000000000002804 164.0
DYD1_k127_4470364_6 Pfam Bacterial-like globin K06886 - - 0.0000000000000000000000000000000000000002267 152.0
DYD1_k127_4470364_7 thioesterase K07107 - - 0.00000000000000000000000000000000000001868 148.0
DYD1_k127_4470364_8 Endoribonuclease L-PSP - - - 0.0000000000000000000000000000000000007138 143.0
DYD1_k127_4470364_9 - - - - 0.00000000000000000000001288 106.0
DYD1_k127_4473373_0 that it carries out the mismatch recognition step. This protein has a weak ATPase activity K03555 GO:0003674,GO:0003676,GO:0003677,GO:0003684,GO:0003690,GO:0003824,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0006139,GO:0006259,GO:0006281,GO:0006298,GO:0006725,GO:0006807,GO:0006950,GO:0006974,GO:0008094,GO:0008150,GO:0008152,GO:0009987,GO:0016462,GO:0016787,GO:0016817,GO:0016818,GO:0016887,GO:0017111,GO:0030983,GO:0032300,GO:0032991,GO:0033554,GO:0034641,GO:0042623,GO:0043170,GO:0044237,GO:0044238,GO:0044260,GO:0044424,GO:0044464,GO:0046483,GO:0050896,GO:0051716,GO:0071704,GO:0090304,GO:0097159,GO:1901360,GO:1901363,GO:1990391 - 0.0 1304.0
DYD1_k127_4473373_1 Belongs to the ompA family K03640 - - 5.219e-243 767.0
DYD1_k127_4473373_10 WD domain, G-beta repeat - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006036 328.0
DYD1_k127_4473373_11 PFAM SpoU rRNA Methylase family - - - 0.00000000000000000000000000000000000000000000000000000000000000009516 226.0
DYD1_k127_4473373_12 Fibrillarin - - - 0.0000000000000000000000000000000000000000000000003492 184.0
DYD1_k127_4473373_13 - - - - 0.0000000000000000000000000000000000000000000004131 173.0
DYD1_k127_4473373_14 - - - - 0.00000000000000000000000000000000000000000002951 166.0
DYD1_k127_4473373_15 CHY zinc finger - - - 0.0000000000000000000000000000000000000002449 151.0
DYD1_k127_4473373_16 - - - - 0.00000000000000000000000001899 109.0
DYD1_k127_4473373_17 - - - - 0.0000000157 58.0
DYD1_k127_4473373_2 COG0491 Zn-dependent hydrolases, including glyoxylases - - - 9.586e-230 719.0
DYD1_k127_4473373_3 PFAM AIR synthase related protein K01933 - 6.3.3.1 4.331e-202 634.0
DYD1_k127_4473373_4 4Fe-4S dicluster domain - - - 3.061e-197 623.0
DYD1_k127_4473373_5 TonB-dependent Receptor Plug K02014 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004015 582.0
DYD1_k127_4473373_6 Fatty acid desaturase K00507 - 1.14.19.1 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002745 529.0
DYD1_k127_4473373_7 PFAM Fatty acid hydroxylase superfamily - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008599 488.0
DYD1_k127_4473373_8 PFAM Cysteine-rich domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006131 467.0
DYD1_k127_4473373_9 The UvrABC repair system catalyzes the recognition and processing of DNA lesions. UvrA is an ATPase and a DNA-binding protein. A damage recognition complex composed of 2 UvrA and 2 UvrB subunits scans DNA for abnormalities. When the presence of a lesion has been verified by UvrB, the UvrA molecules dissociate K03701 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006466 415.0
DYD1_k127_4489681_0 PFAM Rieske 2Fe-2S domain protein K00479,K00499 - 1.14.15.7 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004559 377.0
DYD1_k127_4489681_1 Histidine kinase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000001697 276.0
DYD1_k127_4489681_2 Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000002477 264.0
DYD1_k127_4489681_3 signal transduction histidine kinase - - - 0.0000000000000000000000000000000000000000000000000000000001029 220.0
DYD1_k127_45416_0 magnesium chelatase K07391 - - 3.467e-269 835.0
DYD1_k127_45416_1 ABC transporter transmembrane region K06147,K11085 - - 4.195e-230 728.0
DYD1_k127_45416_2 - - - - 9.34e-204 651.0
DYD1_k127_45416_3 Sugar nucleotidyl transferase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004996 523.0
DYD1_k127_45416_4 PFAM fumarylacetoacetate (FAA) hydrolase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000153 398.0
DYD1_k127_45416_5 Catalyzes the isomerization of sedoheptulose 7-phosphate in D-glycero-D-manno-heptose 7-phosphate K03271 - 5.3.1.28 0.0000000000000000000000000000000000000000000000000000000000000000000000000000001359 269.0
DYD1_k127_45416_6 Ribosomal protein L31 K02909 - - 0.000000000000000000000000000000000003744 138.0
DYD1_k127_4556354_0 One of the essential components for the initiation of protein synthesis. Protects formylmethionyl-tRNA from spontaneous hydrolysis and promotes its binding to the 30S ribosomal subunits. Also involved in the hydrolysis of GTP during the formation of the 70S ribosomal complex K02519 - - 0.0 1079.0
DYD1_k127_4556354_1 Participates in both transcription termination and antitermination K02600 - - 4.088e-226 704.0
DYD1_k127_4556354_10 Required for maturation of 30S ribosomal subunits K09748 GO:0000028,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006412,GO:0006518,GO:0006807,GO:0006996,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0016043,GO:0019538,GO:0022607,GO:0022613,GO:0022618,GO:0034622,GO:0034641,GO:0034645,GO:0042254,GO:0042255,GO:0042274,GO:0043043,GO:0043170,GO:0043603,GO:0043604,GO:0043933,GO:0044085,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044424,GO:0044444,GO:0044464,GO:0065003,GO:0070925,GO:0071704,GO:0071826,GO:0071840,GO:1901564,GO:1901566,GO:1901576 - 0.000000000000000000000000000000001395 136.0
DYD1_k127_4556354_12 glycosyl hydrolase, BNR repeat-containing protein - - - 0.0000000000000000001319 106.0
DYD1_k127_4556354_13 S-layer homology domain - - - 0.00000000002944 79.0
DYD1_k127_4556354_2 PFAM NAD dependent epimerase dehydratase family K01710 - 4.2.1.46 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001974 586.0
DYD1_k127_4556354_3 Belongs to the NAD(P)-dependent epimerase dehydratase family. dTDP-glucose dehydratase subfamily K01710 - 4.2.1.46 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009761 530.0
DYD1_k127_4556354_4 Catalyzes the formation of dTDP-glucose, from dTTP and glucose 1-phosphate, as well as its pyrophosphorolysis K00973 - 2.7.7.24 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001236 471.0
DYD1_k127_4556354_5 PFAM Peptidase family M28 - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009859 408.0
DYD1_k127_4556354_6 Caspase domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002723 340.0
DYD1_k127_4556354_7 guanyl-nucleotide exchange factor activity K03117,K12684,K19231,K20276 - - 0.00000000000000000000000000000000000000000000000006364 207.0
DYD1_k127_4556354_8 7TMR-DISM extracellular 2 - - - 0.0000000000000000000000000000000000000000000000823 188.0
DYD1_k127_4556354_9 Belongs to the UDP-glucose GDP-mannose dehydrogenase family K00012 - 1.1.1.22 0.0000000000000000000000000000000000000000006941 159.0
DYD1_k127_4597489_0 DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates K03046 GO:0000428,GO:0005575,GO:0005622,GO:0005623,GO:0030880,GO:0032991,GO:0044424,GO:0044464,GO:0061695,GO:1902494,GO:1990234 2.7.7.6 0.0 2477.0
DYD1_k127_4597489_1 DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates K03043 GO:0000428,GO:0005575,GO:0005622,GO:0005623,GO:0030880,GO:0032991,GO:0044424,GO:0044464,GO:0061695,GO:1902494,GO:1990234 2.7.7.6 0.0 2280.0
DYD1_k127_4597489_10 PFAM Glycosyl transferases group 1 K00754 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004069 599.0
DYD1_k127_4597489_11 Succinyl-CoA synthetase functions in the citric acid cycle (TCA), coupling the hydrolysis of succinyl-CoA to the synthesis of either ATP or GTP and thus represents the only step of substrate-level phosphorylation in the TCA. The alpha subunit of the enzyme binds the substrates coenzyme A and phosphate, while succinate binding and nucleotide specificity is provided by the beta subunit K01902 - 6.2.1.5 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001479 505.0
DYD1_k127_4597489_12 TonB-dependent receptor K16092 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004852 509.0
DYD1_k127_4597489_13 PFAM periplasmic binding protein K02016 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003182 421.0
DYD1_k127_4597489_14 TIGRFAM LAO AO transport system ATPase K07588 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002113 389.0
DYD1_k127_4597489_15 PFAM Rhomboid family - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001657 384.0
DYD1_k127_4597489_16 Binds directly to 23S rRNA. The L1 stalk is quite mobile in the ribosome, and is involved in E site tRNA release K02863 GO:0000470,GO:0003674,GO:0003676,GO:0003723,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0006139,GO:0006364,GO:0006396,GO:0006412,GO:0006518,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0015934,GO:0016070,GO:0016072,GO:0019538,GO:0022613,GO:0022625,GO:0022626,GO:0032991,GO:0034470,GO:0034641,GO:0034645,GO:0034660,GO:0042254,GO:0042273,GO:0043043,GO:0043170,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043603,GO:0043604,GO:0044085,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:0046483,GO:0071704,GO:0071840,GO:0090304,GO:0097159,GO:1901360,GO:1901363,GO:1901564,GO:1901566,GO:1901576,GO:1990904 - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007534 370.0
DYD1_k127_4597489_17 CHASE2 domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001088 381.0
DYD1_k127_4597489_18 it is required for DNA replication and normal SOS inducibility. RecF binds preferentially to single-stranded, linear DNA. It also seems to bind ATP K03629 GO:0000731,GO:0006139,GO:0006259,GO:0006281,GO:0006302,GO:0006725,GO:0006807,GO:0006950,GO:0006974,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0018130,GO:0019438,GO:0033554,GO:0034641,GO:0034645,GO:0034654,GO:0043170,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044271,GO:0046483,GO:0050896,GO:0051716,GO:0071704,GO:0071897,GO:0090304,GO:1901360,GO:1901362,GO:1901576 - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002781 361.0
DYD1_k127_4597489_19 Participates in transcription elongation, termination and antitermination K02601 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001712 326.0
DYD1_k127_4597489_2 Catalyzes the GTP-dependent ribosomal translocation step during translation elongation. During this step, the ribosome changes from the pre-translocational (PRE) to the post- translocational (POST) state as the newly formed A-site-bound peptidyl-tRNA and P-site-bound deacylated tRNA move to the P and E sites, respectively. Catalyzes the coordinated movement of the two tRNA molecules, the mRNA and conformational changes in the ribosome K02355 - - 0.0 1210.0
DYD1_k127_4597489_20 Fatty acid hydroxylase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000007103 293.0
DYD1_k127_4597489_21 VIT family - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000004494 287.0
DYD1_k127_4597489_22 Forms part of the ribosomal stalk which helps the ribosome interact with GTP-bound translation factors K02867 GO:0000027,GO:0003674,GO:0003676,GO:0003723,GO:0003735,GO:0005198,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0006412,GO:0006518,GO:0006807,GO:0006996,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0015934,GO:0016043,GO:0019538,GO:0019843,GO:0022607,GO:0022613,GO:0022618,GO:0022625,GO:0022626,GO:0032991,GO:0034622,GO:0034641,GO:0034645,GO:0042254,GO:0042255,GO:0042273,GO:0043043,GO:0043170,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043603,GO:0043604,GO:0043933,GO:0044085,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:0065003,GO:0070925,GO:0071704,GO:0071826,GO:0071840,GO:0097159,GO:1901363,GO:1901564,GO:1901566,GO:1901576,GO:1990904 - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000007172 270.0
DYD1_k127_4597489_23 - - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000009142 276.0
DYD1_k127_4597489_24 One of the primary rRNA binding proteins, it binds directly to 16S rRNA where it nucleates assembly of the head domain of the 30S subunit. Is located at the subunit interface close to the decoding center, probably blocks exit of the E-site tRNA K02992 GO:0000028,GO:0003674,GO:0003676,GO:0003723,GO:0003729,GO:0003735,GO:0005198,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0006412,GO:0006518,GO:0006807,GO:0006996,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0015935,GO:0016043,GO:0019538,GO:0019843,GO:0022607,GO:0022613,GO:0022618,GO:0022626,GO:0022627,GO:0032991,GO:0034622,GO:0034641,GO:0034645,GO:0042254,GO:0042255,GO:0042274,GO:0043043,GO:0043170,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043603,GO:0043604,GO:0043933,GO:0044085,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:0065003,GO:0070925,GO:0071704,GO:0071826,GO:0071840,GO:0097159,GO:1901363,GO:1901564,GO:1901566,GO:1901576,GO:1990904 - 0.000000000000000000000000000000000000000000000000000000000000000000000000002214 255.0
DYD1_k127_4597489_25 Interacts with and stabilizes bases of the 16S rRNA that are involved in tRNA selection in the A site and with the mRNA backbone. Located at the interface of the 30S and 50S subunits, it traverses the body of the 30S subunit contacting proteins on the other side and probably holding the rRNA structure together. The combined cluster of proteins S8, S12 and S17 appears to hold together the shoulder and platform of the 30S subunit K02950 GO:0003674,GO:0003735,GO:0005198,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005840,GO:0006412,GO:0006518,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0019538,GO:0032991,GO:0034641,GO:0034645,GO:0043043,GO:0043170,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044424,GO:0044444,GO:0044464,GO:0071704,GO:1901564,GO:1901566,GO:1901576,GO:1990904 - 0.000000000000000000000000000000000000000000000000000000000000000000002472 236.0
DYD1_k127_4597489_26 Forms part of the ribosomal stalk, playing a central role in the interaction of the ribosome with GTP-bound translation factors K02864 - - 0.0000000000000000000000000000000000000000000000000000000000000000007052 231.0
DYD1_k127_4597489_27 Specifically methylates position 2 of adenine 2503 in 23S rRNA and position 2 of adenine 37 in tRNAs K06941 GO:0000154,GO:0001510,GO:0003674,GO:0003824,GO:0006139,GO:0006364,GO:0006396,GO:0006399,GO:0006400,GO:0006725,GO:0006807,GO:0008033,GO:0008150,GO:0008152,GO:0008168,GO:0008173,GO:0008175,GO:0008649,GO:0008757,GO:0009451,GO:0009987,GO:0010467,GO:0016070,GO:0016072,GO:0016740,GO:0016741,GO:0022613,GO:0030488,GO:0031167,GO:0032259,GO:0034470,GO:0034641,GO:0034660,GO:0042254,GO:0043170,GO:0043412,GO:0043414,GO:0044085,GO:0044237,GO:0044238,GO:0044260,GO:0046483,GO:0070475,GO:0071704,GO:0071840,GO:0090304,GO:0140098,GO:0140101,GO:0140102,GO:1901360 2.1.1.192 0.0000000000000000000000000000000000000000000000000000000000002454 213.0
DYD1_k127_4597489_28 Involved in the binding of tRNA to the ribosomes K02946 GO:0003674,GO:0003735,GO:0005198,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005840,GO:0006412,GO:0006518,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0015935,GO:0019538,GO:0032991,GO:0034641,GO:0034645,GO:0043043,GO:0043170,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044446,GO:0044464,GO:0071704,GO:1901564,GO:1901566,GO:1901576,GO:1990904 - 0.00000000000000000000000000000000000000000000000000000001887 197.0
DYD1_k127_4597489_29 PFAM Rhomboid family K09650 - 3.4.21.105 0.0000000000000000000000000000000000000000000000000007867 189.0
DYD1_k127_4597489_3 Glycosyl hydrolase family 3 N terminal domain - - - 2.737e-274 874.0
DYD1_k127_4597489_30 Forms part of the ribosomal stalk which helps the ribosome interact with GTP-bound translation factors. Is thus essential for accurate translation K02935 - - 0.00000000000000000000000000000000000000000000000001334 182.0
DYD1_k127_4597489_31 Protein of unknown function (DUF3467) - - - 0.00000000000000000000000000000000000000000000000001382 181.0
DYD1_k127_4597489_32 The pyruvate dehydrogenase complex catalyzes the overall conversion of pyruvate to acetyl-CoA and CO(2) K00161 - 1.2.4.1 0.000000000000000000000000000000000000000000000003328 174.0
DYD1_k127_4597489_33 - - - - 0.0000000000000000000000000001805 117.0
DYD1_k127_4597489_34 Protein of unknown function (DUF721) - - - 0.0000000000000000000000002493 108.0
DYD1_k127_4597489_35 Essential subunit of the Sec protein translocation channel SecYEG. Clamps together the 2 halves of SecY. May contact the channel plug during translocation K03073 - - 0.000000000000000000112 89.0
DYD1_k127_4597489_36 - - - - 0.000000000000000075 84.0
DYD1_k127_4597489_38 - - - - 0.000007389 48.0
DYD1_k127_4597489_4 magnesium chelatase K03405 - 6.6.1.1 3.729e-240 750.0
DYD1_k127_4597489_5 This protein is involved in the repair of mismatches in DNA. It is required for dam-dependent methyl-directed DNA mismatch repair. May act as a molecular matchmaker , a protein that promotes the formation of a stable complex between two or more DNA-binding proteins in an ATP-dependent manner without itself being part of a final effector complex K03572 GO:0003674,GO:0003676,GO:0003677,GO:0003697,GO:0003824,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0006139,GO:0006259,GO:0006281,GO:0006298,GO:0006725,GO:0006807,GO:0006950,GO:0006974,GO:0008150,GO:0008152,GO:0009987,GO:0016462,GO:0016787,GO:0016817,GO:0016818,GO:0016887,GO:0017111,GO:0032300,GO:0032991,GO:0033554,GO:0034641,GO:0043170,GO:0044237,GO:0044238,GO:0044260,GO:0044424,GO:0044464,GO:0046483,GO:0050896,GO:0051716,GO:0071704,GO:0090304,GO:0097159,GO:1901360,GO:1901363,GO:1990391 - 5.27e-239 753.0
DYD1_k127_4597489_6 PIN domain K07175 - - 2.227e-237 739.0
DYD1_k127_4597489_7 This protein promotes the GTP-dependent binding of aminoacyl-tRNA to the A-site of ribosomes during protein biosynthesis K02358 - - 2.022e-218 681.0
DYD1_k127_4597489_8 Cys/Met metabolism PLP-dependent enzyme K01761 - 4.4.1.11 1.154e-196 620.0
DYD1_k127_4597489_9 von Willebrand factor, type A - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005868 601.0
DYD1_k127_4670486_0 Mo-co oxidoreductase dimerisation domain - - - 3.29e-197 621.0
DYD1_k127_4670486_1 Serine carboxypeptidase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001898 572.0
DYD1_k127_4670486_2 Amidohydrolase family - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005247 467.0
DYD1_k127_4670486_3 Psort location CytoplasmicMembrane, score - - - 0.0000000000000000000000000000000000000000009308 163.0
DYD1_k127_4670486_4 Winged helix DNA-binding domain - - - 0.000000000000000000000000000000000000000003891 156.0
DYD1_k127_4670486_5 - - - - 0.0000000000000000000000000000000000003584 145.0
DYD1_k127_4670486_6 - - - - 0.00000000000000000000001028 107.0
DYD1_k127_4670486_7 - - - - 0.00000000000000000000004257 102.0
DYD1_k127_4670486_8 - - - - 0.00000000000000009645 87.0
DYD1_k127_4695414_0 PFAM Glycoside hydrolase, family 37 K01194 - 3.2.1.28 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005871 594.0
DYD1_k127_4695414_1 PFAM Major Facilitator Superfamily - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001171 554.0
DYD1_k127_4695414_10 CarboxypepD_reg-like domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000006219 254.0
DYD1_k127_4695414_11 haloacid dehalogenase superfamily, subfamily IA, variant 1 with third motif having Dx(3-4)D or Dx(3-4)E K07025 - - 0.000000000000000000000000000000000000000000000000000000000000005463 223.0
DYD1_k127_4695414_12 Universal stress protein - - - 0.0000000000000000000000000000000000000000000000000000001192 205.0
DYD1_k127_4695414_13 arsR family K03892 - - 0.00000000000000000000000000000000000000000000000345 175.0
DYD1_k127_4695414_14 Universal stress protein - - - 0.00000000000000000009304 100.0
DYD1_k127_4695414_15 Sugar nucleotidyl transferase - - - 0.000000001024 60.0
DYD1_k127_4695414_2 type I phosphodiesterase nucleotide pyrophosphatase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006781 552.0
DYD1_k127_4695414_3 Belongs to the sodium neurotransmitter symporter (SNF) (TC 2.A.22) family K03308 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003254 531.0
DYD1_k127_4695414_4 TIGRFAM delta-1-pyrroline-5-carboxylate dehydrogenase, group 1 K00294,K13821 - 1.2.1.88,1.5.5.2 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002501 464.0
DYD1_k127_4695414_5 Belongs to the sodium neurotransmitter symporter (SNF) (TC 2.A.22) family K03308 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006142 437.0
DYD1_k127_4695414_6 Mediates coordination of peptidoglycan synthesis and outer membrane constriction during cell division - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002468 454.0
DYD1_k127_4695414_7 DNA polymerase III, delta' subunit K02341 - 2.7.7.7 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000336 396.0
DYD1_k127_4695414_8 Catalyzes the reduction of dTDP-6-deoxy-L-lyxo-4- hexulose to yield dTDP-L-rhamnose K00067 - 1.1.1.133 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003447 375.0
DYD1_k127_4695414_9 PPIases accelerate the folding of proteins. It catalyzes the cis-trans isomerization of proline imidic peptide bonds in oligopeptides K03768 - 5.2.1.8 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002213 306.0
DYD1_k127_4708632_0 Zinc carboxypeptidase - - - 5e-324 1013.0
DYD1_k127_4708632_1 TIGRFAM Na H antiporter NhaC K03315 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002002 608.0
DYD1_k127_4708632_10 Protein involved in cellulose biosynthesis - - - 0.000000000000000000000000000002384 132.0
DYD1_k127_4708632_11 Major Facilitator Superfamily - - - 0.00000000001978 67.0
DYD1_k127_4708632_2 PFAM 3-Deoxy-D-manno-octulosonic-acid transferase (kdotransferase) K02527 - 2.4.99.12,2.4.99.13,2.4.99.14,2.4.99.15 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008687 442.0
DYD1_k127_4708632_3 Peptidase family M20/M25/M40 K01438 - 3.5.1.16 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001344 340.0
DYD1_k127_4708632_4 One of several proteins that assist in the late maturation steps of the functional core of the 30S ribosomal subunit. Helps release RbfA from mature subunits. May play a role in the assembly of ribosomal proteins into the subunit. Circularly permuted GTPase that catalyzes slow GTP hydrolysis, GTPase activity is stimulated by the 30S ribosomal subunit K06949 - 3.1.3.100 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001615 337.0
DYD1_k127_4708632_5 PFAM Glycosyl transferase family 2 - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000004673 293.0
DYD1_k127_4708632_6 Domain of unknown function (DUF4442) - - - 0.000000000000000000000000000000000000000000000000000000000000000000000001343 250.0
DYD1_k127_4708632_7 3'-5' exonuclease - - - 0.00000000000000000000000000000000000000000000000000000000102 206.0
DYD1_k127_4708632_8 - - - - 0.0000000000000000000000000000000000000000001647 168.0
DYD1_k127_4708632_9 TIGRFAM endoribonuclease L-PSP - - - 0.00000000000000000000000000000000000000003222 156.0
DYD1_k127_4709574_0 ATP-dependent specificity component of the Clp protease. It directs the protease to specific substrates. Can perform chaperone functions in the absence of ClpP K03544 GO:0000166,GO:0003674,GO:0003824,GO:0004176,GO:0005488,GO:0005524,GO:0006508,GO:0006807,GO:0008144,GO:0008150,GO:0008152,GO:0008233,GO:0009056,GO:0009057,GO:0009987,GO:0016462,GO:0016787,GO:0016817,GO:0016818,GO:0016887,GO:0017076,GO:0017111,GO:0019538,GO:0030163,GO:0030554,GO:0032553,GO:0032555,GO:0032559,GO:0035639,GO:0036094,GO:0042623,GO:0043167,GO:0043168,GO:0043170,GO:0044238,GO:0051301,GO:0070011,GO:0071704,GO:0097159,GO:0097367,GO:0140096,GO:1901265,GO:1901363,GO:1901564,GO:1901565,GO:1901575 - 1.238e-223 697.0
DYD1_k127_4709574_1 Belongs to the ompA family - - - 3.012e-218 694.0
DYD1_k127_4709574_2 PFAM peptidase S8 and S53 subtilisin kexin sedolisin - - - 3.429e-196 652.0
DYD1_k127_4709574_3 Catalyzes the interconversion between ADP-D-glycero- beta-D-manno-heptose and ADP-L-glycero-beta-D-manno-heptose via an epimerization at carbon 6 of the heptose K03274 - 5.1.3.20 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009352 514.0
DYD1_k127_4709574_4 Condensation of UDP-2,3-diacylglucosamine and 2,3- diacylglucosamine-1-phosphate to form lipid A disaccharide, a precursor of lipid A, a phosphorylated glycolipid that anchors the lipopolysaccharide to the outer membrane of the cell K00748 - 2.4.1.182 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001906 397.0
DYD1_k127_4709574_5 Cleaves peptides in various proteins in a process that requires ATP hydrolysis. Has a chymotrypsin-like activity. Plays a major role in the degradation of misfolded proteins K01358 - 3.4.21.92 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004209 353.0
DYD1_k127_4709574_6 Catalyzes the oxidation of 5,10- methylenetetrahydrofolate to 5,10-methenyltetrahydrofolate and then the hydrolysis of 5,10-methenyltetrahydrofolate to 10- formyltetrahydrofolate K01491 GO:0003674,GO:0003824,GO:0004477,GO:0004488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006730,GO:0008150,GO:0008152,GO:0009987,GO:0016491,GO:0016645,GO:0016646,GO:0016787,GO:0016810,GO:0016814,GO:0019238,GO:0044237,GO:0044281,GO:0044424,GO:0044444,GO:0044464,GO:0055114 1.5.1.5,3.5.4.9 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008513 306.0
DYD1_k127_4709574_7 Catalyzes the complex heterocyclic radical-mediated conversion of 6-carboxy-5,6,7,8-tetrahydropterin (CPH4) to 7- carboxy-7-deazaguanine (CDG), a step common to the biosynthetic pathways of all 7-deazapurine-containing compounds K10026 - 4.3.99.3 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000005239 288.0
DYD1_k127_4709574_8 TIGRFAM 6-pyruvoyl tetrahydropterin synthase QueD family protein K01737 - 4.1.2.50,4.2.3.12 0.000000000000000000000000000000000000000000000000000000000000000000000001388 246.0
DYD1_k127_4709574_9 Trigger factor K03545 - - 0.00000000000000000000000000000000000000000000000006758 182.0
DYD1_k127_4739022_0 von Willebrand factor, type A - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002537 421.0
DYD1_k127_4739022_1 Transposase IS200 like - - - 0.00000000000000000000000000000000000000000000000000008375 194.0
DYD1_k127_47515_0 MacB-like periplasmic core domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002352 525.0
DYD1_k127_47515_1 YjgF/chorismate_mutase-like, putative endoribonuclease - - - 0.0000000000000000000000000000000001356 134.0
DYD1_k127_4826247_0 Amidase - - - 1.203e-201 642.0
DYD1_k127_4826247_1 PFAM Type III restriction enzyme, res subunit - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002774 317.0
DYD1_k127_4826247_2 Protein of unknown function (DUF2911) - - - 0.00000000000000000000000000000000000000000000000000007419 191.0
DYD1_k127_4826247_3 Peptidase dimerisation domain K01451 - 3.5.1.32 0.0000000000000000000000000000000000000000000000000001073 192.0
DYD1_k127_4833841_0 Y_Y_Y domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008447 580.0
DYD1_k127_4833841_1 Caspase domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000088 367.0
DYD1_k127_4833841_2 - - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000002033 281.0
DYD1_k127_4833841_3 DinB superfamily - - - 0.000000000000000000000000000000000000000000000000000000001734 204.0
DYD1_k127_4833841_4 Concanavalin A-like lectin/glucanases superfamily - - - 0.0000000000000000000000000000000000000000000002033 190.0
DYD1_k127_4833841_5 D-Ala-D-Ala carboxypeptidase 3 (S13) family K07259 - 3.4.16.4 0.000000000000000000000000000000000000008364 150.0
DYD1_k127_4895479_0 NAD-binding protein involved in the addition of a carboxymethylaminomethyl (cmnm) group at the wobble position (U34) of certain tRNAs, forming tRNA-cmnm(5)s(2)U34 K03495 GO:0000166,GO:0001510,GO:0002097,GO:0002098,GO:0003674,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006139,GO:0006396,GO:0006399,GO:0006400,GO:0006725,GO:0006807,GO:0008033,GO:0008150,GO:0008152,GO:0009451,GO:0009987,GO:0010467,GO:0016070,GO:0030488,GO:0032259,GO:0034470,GO:0034641,GO:0034660,GO:0036094,GO:0043167,GO:0043168,GO:0043170,GO:0043412,GO:0043414,GO:0044237,GO:0044238,GO:0044260,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0048037,GO:0050660,GO:0050662,GO:0071704,GO:0090304,GO:0097159,GO:1901265,GO:1901360,GO:1901363 - 2.059e-310 961.0
DYD1_k127_4895479_1 FtsX-like permease family K02004 - - 2.78e-286 906.0
DYD1_k127_4895479_10 Peptidase dimerisation domain K13049 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001572 478.0
DYD1_k127_4895479_11 Cytochrome c - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005232 428.0
DYD1_k127_4895479_12 Bacterial Ig-like domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004074 394.0
DYD1_k127_4895479_13 UPF0126 domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000002227 289.0
DYD1_k127_4895479_14 Redoxin - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000003301 285.0
DYD1_k127_4895479_15 Methyltransferase type 11 - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000009647 269.0
DYD1_k127_4895479_16 Thioesterase - - - 0.0000000000000000000000000000000000000000000000000000000000000001053 223.0
DYD1_k127_4895479_17 PFAM Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase K04757 - 2.7.11.1 0.0000000000000000000000000000000000000000000000000000000000000001377 222.0
DYD1_k127_4895479_18 Di-iron-containing protein involved in the repair of iron-sulfur clusters K07322 - - 0.0000000000000000000000000000000000000000000000000000000001679 210.0
DYD1_k127_4895479_19 DsrE/DsrF/DrsH-like family - - - 0.000000000000000000000000000000000000000000000000000000004202 204.0
DYD1_k127_4895479_2 nuclear chromosome segregation - - - 2.271e-266 848.0
DYD1_k127_4895479_20 Single strand-specific metallo-endoribonuclease involved in late-stage 70S ribosome quality control and in maturation of the 3' terminus of the 16S rRNA - - - 0.0000000000000000000000000000000000000000004294 161.0
DYD1_k127_4895479_21 Transcriptional regulator PadR-like family - - - 0.00000000000000000000000000000000000001507 147.0
DYD1_k127_4895479_22 DsrC like protein K11179 - - 0.00000000000000000000000000000000223 131.0
DYD1_k127_4895479_23 rRNA binding - - - 0.00000000000000000289 94.0
DYD1_k127_4895479_24 PFAM AIR synthase related protein, N-terminal domain K04655 - - 0.00000002045 55.0
DYD1_k127_4895479_25 - - - - 0.0000315 50.0
DYD1_k127_4895479_3 MacB-like periplasmic core domain K02004 - - 8.148e-259 820.0
DYD1_k127_4895479_4 Ribonucleotide reductase, barrel domain K00525,K21636 - 1.1.98.6,1.17.4.1 5.787e-244 767.0
DYD1_k127_4895479_5 Amidohydrolase family - - - 1.063e-230 719.0
DYD1_k127_4895479_6 Belongs to the sodium solute symporter (SSF) (TC 2.A.21) family - - - 4.108e-204 648.0
DYD1_k127_4895479_7 Tetratricopeptide repeat - - - 5.762e-196 630.0
DYD1_k127_4895479_8 Sugar (and other) transporter K08138 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003305 576.0
DYD1_k127_4895479_9 Pyridine nucleotide-disulphide oxidoreductase K17218 - 1.8.5.4 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003645 572.0
DYD1_k127_4901_0 Dehydrogenase E1 component K00615 - 2.2.1.1 6.617e-243 761.0
DYD1_k127_4901_1 PFAM Vacuole effluxer Atg22 like K06902 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006172 538.0
DYD1_k127_4901_2 Belongs to the AlaDH PNT family K00259 - 1.4.1.1 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004167 519.0
DYD1_k127_4901_3 Catalyzes the hydrolysis of AMP to form adenine and ribose 5-phosphate using water as the nucleophile K01241 - 3.2.2.4 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003272 413.0
DYD1_k127_4901_4 PFAM MotA TolQ ExbB proton channel family K03561 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001569 357.0
DYD1_k127_4901_5 Biopolymer transport protein ExbD/TolR K03559 - - 0.00000000000000000000000000000000000000000000000000000000000000006592 224.0
DYD1_k127_4901_6 Biopolymer transport protein ExbD/TolR - - - 0.0000000000000000000000000000000000000000000000000000000000005925 215.0
DYD1_k127_4901_7 Type I restriction enzyme R Protein - - - 0.000000000000000000000000000000000000000000001669 168.0
DYD1_k127_4901_8 - - - - 0.00000000000000266 79.0
DYD1_k127_4901_9 transferase activity, transferring acyl groups - - - 0.0000000005706 65.0
DYD1_k127_494252_0 NQR complex catalyzes the reduction of ubiquinone-1 to ubiquinol by two successive reactions, coupled with the transport of Na( ) ions from the cytoplasm to the periplasm. NqrA to NqrE are probably involved in the second step, the conversion of ubisemiquinone to ubiquinol K00346 - 1.6.5.8 1.038e-205 648.0
DYD1_k127_494252_1 NQR complex catalyzes the reduction of ubiquinone-1 to ubiquinol by two successive reactions, coupled with the transport of Na( ) ions from the cytoplasm to the periplasm. NqrA to NqrE are probably involved in the second step, the conversion of ubisemiquinone to ubiquinol K00347 - 1.6.5.8 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000032 557.0
DYD1_k127_494252_2 NQR complex catalyzes the reduction of ubiquinone-1 to ubiquinol by two successive reactions, coupled with the transport of Na( ) ions from the cytoplasm to the periplasm. NqrA to NqrE are probably involved in the second step, the conversion of ubisemiquinone to ubiquinol K00349 - 1.6.5.8 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007612 335.0
DYD1_k127_494252_3 NQR complex catalyzes the reduction of ubiquinone-1 to ubiquinol by two successive reactions, coupled with the transport of Na( ) ions from the cytoplasm to the periplasm. NqrA to NqrE are probably involved in the second step, the conversion of ubisemiquinone to ubiquinol K00350 - 1.6.5.8 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008584 334.0
DYD1_k127_494252_4 Belongs to the cytidylate kinase family. Type 1 subfamily K00945 GO:0003674,GO:0003824,GO:0004127,GO:0004592,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006082,GO:0006139,GO:0006520,GO:0006573,GO:0006575,GO:0006725,GO:0006732,GO:0006753,GO:0006766,GO:0006767,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009081,GO:0009108,GO:0009110,GO:0009117,GO:0009123,GO:0009165,GO:0009987,GO:0015939,GO:0015940,GO:0016053,GO:0016301,GO:0016310,GO:0016740,GO:0016772,GO:0016776,GO:0016874,GO:0016879,GO:0016881,GO:0018130,GO:0019205,GO:0019438,GO:0019637,GO:0019752,GO:0032787,GO:0033317,GO:0034641,GO:0034654,GO:0042364,GO:0042398,GO:0043436,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0044283,GO:0044424,GO:0044444,GO:0044464,GO:0046394,GO:0046483,GO:0046939,GO:0046940,GO:0050145,GO:0051186,GO:0051188,GO:0055086,GO:0071704,GO:0072330,GO:0090407,GO:1901293,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576,GO:1901605 2.7.4.25 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000007578 298.0
DYD1_k127_494252_5 NQR complex catalyzes the reduction of ubiquinone-1 to ubiquinol by two successive reactions, coupled with the transport of Na( ) ions from the cytoplasm to the periplasm. NqrA to NqrE are probably involved in the second step, the conversion of ubisemiquinone to ubiquinol K00348 - 1.6.5.8 0.0000000000000000000000000000000000000000000000000000000000000000000000000006175 262.0
DYD1_k127_494252_6 Protein of unknown function (DUF502) - - - 0.00000000000000000000000000000000000000000000000001338 185.0
DYD1_k127_494252_7 - - - - 0.0000000000000000001343 90.0
DYD1_k127_5012789_0 Amino acid permease - - - 2.343e-197 625.0
DYD1_k127_5012789_1 Methyltransferase domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003946 414.0
DYD1_k127_5012789_2 Ion channel K10716 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000001492 300.0
DYD1_k127_5012789_3 beta-lactamase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000004262 276.0
DYD1_k127_5012789_4 Tetratricopeptide repeat - - - 0.000000000000000000000000000000000000000008459 160.0
DYD1_k127_5012789_5 Belongs to the sigma-70 factor family. ECF subfamily K03088 - - 0.000000000000000000000000001218 119.0
DYD1_k127_5020760_0 Catalyzes the conversion of urocanate to 4-imidazolone- 5-propionate K01712 - 4.2.1.49 0.0 1082.0
DYD1_k127_5020760_1 PFAM Metallo-beta-lactamase superfamily - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001928 384.0
DYD1_k127_5020760_2 esterase of the alpha-beta hydrolase superfamily K07001 - - 0.0000000000000000000000000000000000000000000000000000000000000000000005476 245.0
DYD1_k127_5020760_3 Phosphate acyltransferases - - - 0.0000000000000000000000000000000000000000000000000000002122 199.0
DYD1_k127_5039599_0 DNA methylase N-4 - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000003253 307.0
DYD1_k127_5039599_1 Belongs to the N(4) N(6)-methyltransferase family - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000002485 259.0
DYD1_k127_5039599_10 beta-lactamase activity K01058,K07502 - 3.1.1.32,3.1.1.4 0.00000000000007695 79.0
DYD1_k127_5039599_11 Tetratricopeptide repeat - - - 0.0000000000004753 78.0
DYD1_k127_5039599_12 Psort location Cytoplasmic, score 8.96 - - - 0.0000000000005699 74.0
DYD1_k127_5039599_14 - - - - 0.00000000001041 75.0
DYD1_k127_5039599_15 - - - - 0.0000000000643 76.0
DYD1_k127_5039599_16 YopX protein - - - 0.000000003116 64.0
DYD1_k127_5039599_17 ADP-glyceromanno-heptose 6-epimerase activity K00067,K01784 - 1.1.1.133,5.1.3.2 0.0000000351 61.0
DYD1_k127_5039599_19 - - - - 0.00000007288 61.0
DYD1_k127_5039599_2 - - - - 0.000000000000000000000000000000000000000000000000000000000169 209.0
DYD1_k127_5039599_23 Glycosyl transferase, family 2 - - - 0.00000684 57.0
DYD1_k127_5039599_24 Tetratricopeptide repeat - - - 0.00001965 55.0
DYD1_k127_5039599_25 Capsule polysaccharide biosynthesis protein - - - 0.0001203 51.0
DYD1_k127_5039599_26 COG3209 Rhs family protein - - - 0.0001699 51.0
DYD1_k127_5039599_3 phage Terminase large subunit - - - 0.0000000000000000000000000000000000000000000000001699 193.0
DYD1_k127_5039599_4 COG NOG24226 non supervised orthologous group K07474 - - 0.0000000000000000000000000000000000000000874 156.0
DYD1_k127_5039599_5 - - - - 0.00000000000000000000000000000001791 132.0
DYD1_k127_5039599_6 nuclear chromosome segregation - - - 0.00000000000000000000000000000003264 146.0
DYD1_k127_5039599_7 - - - - 0.0000000000000000000000000000001303 134.0
DYD1_k127_5039599_8 Peptidase M15 - - - 0.000000000000000000000000000002243 126.0
DYD1_k127_5039599_9 NUMOD4 motif - - - 0.0000000000000006512 84.0
DYD1_k127_5069304_0 Amino acid permease - - - 0.0 1307.0
DYD1_k127_5069304_1 PFAM sodium hydrogen exchanger - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001997 437.0
DYD1_k127_5069304_2 Rieske [2Fe-2S] domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003902 328.0
DYD1_k127_5069304_3 OST-HTH/LOTUS domain - - - 0.0000000000000000000000000004203 113.0
DYD1_k127_5146651_0 Outer membrane protein beta-barrel domain - - - 1.276e-278 871.0
DYD1_k127_5146651_1 chorismate mutase K04516 - 5.4.99.5 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002066 527.0
DYD1_k127_5146651_10 - - - - 0.0000001669 55.0
DYD1_k127_5146651_2 PFAM Aminotransferase class I and II K10206,K14261 - 2.6.1.83 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001781 465.0
DYD1_k127_5146651_3 Fatty acid hydroxylase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000105 447.0
DYD1_k127_5146651_4 guanyl-nucleotide exchange factor activity K20276 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004593 393.0
DYD1_k127_5146651_5 Prephenate dehydratase K04518 - 4.2.1.51 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001679 318.0
DYD1_k127_5146651_6 Prephenate dehydrogenase K04517 - 1.3.1.12 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001193 311.0
DYD1_k127_5146651_7 AraC family - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000002538 291.0
DYD1_k127_5146651_8 Has lipid A 3-O-deacylase activity. Hydrolyzes the ester bond at the 3 position of lipid A, a bioactive component of lipopolysaccharide (LPS), thereby releasing the primary fatty acyl moiety - - - 0.0000000000000000000000000000000000000000000000000000001974 198.0
DYD1_k127_5146651_9 - - - - 0.000000000000000000000000000000000000000000005948 183.0
DYD1_k127_5228696_0 Belongs to the sodium solute symporter (SSF) (TC 2.A.21) family - - - 7.219e-277 861.0
DYD1_k127_5228696_1 Belongs to the aldehyde dehydrogenase family K00128,K10217 - 1.2.1.3,1.2.1.32,1.2.1.85 3.58e-249 775.0
DYD1_k127_5228696_10 Part of the outer membrane protein assembly complex, which is involved in assembly and insertion of beta-barrel proteins into the outer membrane - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005422 392.0
DYD1_k127_5228696_11 S1 domain K00243 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001019 373.0
DYD1_k127_5228696_12 PFAM Short-chain dehydrogenase reductase SDR K00059 - 1.1.1.100 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005298 344.0
DYD1_k127_5228696_13 Nucleotidyl transferase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002035 345.0
DYD1_k127_5228696_14 TIGRFAM Nicotinamide mononucleotide transporter PnuC K03811 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004493 321.0
DYD1_k127_5228696_15 Catalyzes the oxidative ring opening of 3- hydroxyanthranilate to 2-amino-3-carboxymuconate semialdehyde, which spontaneously cyclizes to quinolinate K00452 - 1.13.11.6 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000001 283.0
DYD1_k127_5228696_16 Hypothetical methyltransferase - - - 0.000000000000000000000000000000000000000000000000000000000001178 219.0
DYD1_k127_5228696_17 - - - - 0.000000000000000000000000000000000000000000002221 169.0
DYD1_k127_5228696_18 - - - - 0.000000000000003834 85.0
DYD1_k127_5228696_2 Belongs to the glutamate synthase family - - - 8.64e-225 707.0
DYD1_k127_5228696_3 malate quinone oxidoreductase K00116 - 1.1.5.4 9.366e-196 622.0
DYD1_k127_5228696_4 soluble lytic transglycosylase fused to an ABC-type amino acid-binding protein K18691 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002334 568.0
DYD1_k127_5228696_5 Catalyzes the cleavage of L-kynurenine (L-Kyn) and L-3- hydroxykynurenine (L-3OHKyn) into anthranilic acid (AA) and 3- hydroxyanthranilic acid (3-OHAA), respectively K01556 - 3.7.1.3 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004069 543.0
DYD1_k127_5228696_6 Catalyzes the hydroxylation of L-kynurenine (L-Kyn) to form 3-hydroxy-L-kynurenine (L-3OHKyn). Required for synthesis of quinolinic acid K00486 - 1.14.13.9 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000102 541.0
DYD1_k127_5228696_7 Sodium:neurotransmitter symporter family K03308 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001422 485.0
DYD1_k127_5228696_8 ATPase kinase involved in NAD metabolism - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000025 399.0
DYD1_k127_5228696_9 Carboxypeptidase regulatory-like domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003723 389.0
DYD1_k127_5318314_0 TonB-dependent Receptor Plug - - - 4.66e-227 734.0
DYD1_k127_5318314_1 Pyruvate 2-oxoglutarate dehydrogenase complex, dehydrogenase component beta subunit K11381 - 1.2.4.4 3.083e-224 702.0
DYD1_k127_5318314_10 5-formyltetrahydrofolate cyclo-ligase family K01934 - 6.3.3.2 0.0000000000000000000000000000000000000000000004519 172.0
DYD1_k127_5318314_11 - - - - 0.0000000000000000000000000000000000000000001372 167.0
DYD1_k127_5318314_12 Domain of unknown function (DUF4249) - - - 0.00000000000000000000000000000000005137 147.0
DYD1_k127_5318314_13 Belongs to the bacterial ribosomal protein bL28 family K02902 GO:0003674,GO:0003735,GO:0005198,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0015934,GO:0022625,GO:0022626,GO:0032991,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:1990904 - 0.00000000000000000000000000000006825 126.0
DYD1_k127_5318314_14 Belongs to the bacterial ribosomal protein bL33 family K02913 - - 0.0000000000000000000000000003436 113.0
DYD1_k127_5318314_15 Domain of unknown function (DUF4295) - - - 0.00000000000000639 75.0
DYD1_k127_5318314_2 Catalyzes the methylthiolation of an aspartic acid residue of ribosomal protein S12 K14441 - 2.8.4.4 2.341e-223 698.0
DYD1_k127_5318314_3 PFAM Peptidase M16 inactive domain K07263 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007332 565.0
DYD1_k127_5318314_4 Involved in targeting and insertion of nascent membrane proteins into the cytoplasmic membrane. Acts as a receptor for the complex formed by the signal recognition particle (SRP) and the ribosome-nascent chain (RNC) K03110 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004253 538.0
DYD1_k127_5318314_5 Belongs to the BshC family K22136 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003256 537.0
DYD1_k127_5318314_6 Repeat domain in Vibrio, Colwellia, Bradyrhizobium and Shewanella - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006334 457.0
DYD1_k127_5318314_7 Involved in the biosynthesis of isopentenyl diphosphate (IPP) and dimethylallyl diphosphate (DMAPP), two major building blocks of isoprenoid compounds. Catalyzes the conversion of 4- diphosphocytidyl-2-C-methyl-D-erythritol 2-phosphate (CDP-ME2P) to 2-C-methyl-D-erythritol 2,4-cyclodiphosphate (ME-CPP) with a corresponding release of cytidine 5-monophosphate (CMP) K01770 - 4.6.1.12 0.00000000000000000000000000000000000000000000000000000000000000000003132 235.0
DYD1_k127_5318314_8 Large extracellular alpha-helical protein - - - 0.00000000000000000000000000000000000000000000000000000000000001407 242.0
DYD1_k127_5318314_9 S-adenosyl-L-methionine-dependent methyltransferase - - - 0.0000000000000000000000000000000000000000000000000000000682 205.0
DYD1_k127_5335651_0 Part of a stress-induced multi-chaperone system, it is involved in the recovery of the cell from heat-induced damage, in cooperation with DnaK, DnaJ and GrpE K03695 - - 0.0 1360.0
DYD1_k127_5335651_1 PFAM D-aminoacylase, C-terminal region K06015 - 3.5.1.81 1.173e-227 715.0
DYD1_k127_5335651_10 PFAM peptidase M14 carboxypeptidase A - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007779 361.0
DYD1_k127_5335651_11 peptidase M1 - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007395 323.0
DYD1_k127_5335651_12 Crp-like helix-turn-helix domain K10914 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001247 315.0
DYD1_k127_5335651_13 Phosphatidylserine decarboxylase K01613 - 4.1.1.65 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005473 315.0
DYD1_k127_5335651_14 protein SCO1 SenC PrrC involved in biogenesis of respiratory and photosynthetic systems K07152 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000001637 276.0
DYD1_k127_5335651_15 beta barrel domain K07140 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000002982 273.0
DYD1_k127_5335651_16 Plays a role in the regulation of phosphate uptake K02039 - - 0.00000000000000000000000000000000000000000000000000000000000000002106 231.0
DYD1_k127_5335651_17 Belongs to the iron ascorbate-dependent oxidoreductase family - - - 0.000000000000000000000000000000000000000000000000000000001343 214.0
DYD1_k127_5335651_18 PFAM Peptidase M56, BlaR1 - - - 0.0000000000000000000000000000000000000000000000000000001791 216.0
DYD1_k127_5335651_19 Cytochrome c, class I - - - 0.00000000000000000000000000000000000000007279 155.0
DYD1_k127_5335651_2 Pfam Phosphate-selective porin O and P - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000729 562.0
DYD1_k127_5335651_20 Transcriptional repressor, CopY family - - - 0.0000000000000000000000000000000007897 134.0
DYD1_k127_5335651_21 - - - - 0.00008172 47.0
DYD1_k127_5335651_3 Amidohydrolase family - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007567 559.0
DYD1_k127_5335651_4 Binding-protein-dependent transport system inner membrane component K02038 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003404 478.0
DYD1_k127_5335651_5 PBP superfamily domain K02040 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000871 462.0
DYD1_k127_5335651_6 Phosphate-selective porin O and P - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000303 456.0
DYD1_k127_5335651_7 Part of the ABC transporter complex PstSACB involved in phosphate import. Responsible for energy coupling to the transport system K02036 - 3.6.3.27 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001404 422.0
DYD1_k127_5335651_8 TrkA-N domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001775 407.0
DYD1_k127_5335651_9 probably responsible for the translocation of the substrate across the membrane K02037 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002243 355.0
DYD1_k127_5356979_0 Sortilin, neurotensin receptor 3, - - - 0.0 1149.0
DYD1_k127_5356979_1 Dienelactone hydrolase family - - - 2.783e-318 987.0
DYD1_k127_5356979_10 methyltransferase - - - 0.000000000000000000000000000000000000000001154 166.0
DYD1_k127_5356979_11 Iron-binding zinc finger CDGSH type - - - 0.0000000000000000000000000000000002291 133.0
DYD1_k127_5356979_12 Sugar efflux transporter for intercellular exchange K15383 - - 0.0000000000000000000000000000002466 125.0
DYD1_k127_5356979_13 - - - - 0.000000000000000000000000000001061 126.0
DYD1_k127_5356979_14 - - - - 0.000000000000000000000000000271 121.0
DYD1_k127_5356979_15 CRP FNR family transcriptional regulator - - - 0.00000000000000002737 81.0
DYD1_k127_5356979_2 PFAM Amidohydrolase 2 - - - 3.822e-209 654.0
DYD1_k127_5356979_3 Polyphosphate kinase N-terminal domain K00937 - 2.7.4.1 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001834 604.0
DYD1_k127_5356979_4 OsmC-like protein K06889,K07397 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002929 499.0
DYD1_k127_5356979_5 OmpA family - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001306 454.0
DYD1_k127_5356979_6 Ion transport protein K10716 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000003749 294.0
DYD1_k127_5356979_7 NADPH-dependent FMN reductase - - - 0.000000000000000000000000000000000000000000000000000000000000000000001511 241.0
DYD1_k127_5356979_8 Protein of unknown function (DUF2911) - - - 0.000000000000000000000000000000000000000000000000000000000000000724 223.0
DYD1_k127_5356979_9 DinB superfamily - - - 0.00000000000000000000000000000000000000000000000000000000004674 209.0
DYD1_k127_5358241_0 PFAM UvrD REP helicase K03657 - 3.6.4.12 9.562e-195 613.0
DYD1_k127_5358241_1 Belongs to the peptidase S26 family K03100 - 3.4.21.89 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002325 481.0
DYD1_k127_5358241_10 Catalyzes the conversion of 4-hydroxy- tetrahydrodipicolinate (HTPA) to tetrahydrodipicolinate K00215 - 1.17.1.8 0.00000000000000000000000000000006708 126.0
DYD1_k127_5358241_2 Excises uracil residues from the DNA which can arise as a result of misincorporation of dUMP residues by DNA polymerase or due to deamination of cytosine K03648 GO:0003674,GO:0003824,GO:0004844,GO:0006139,GO:0006259,GO:0006281,GO:0006284,GO:0006285,GO:0006725,GO:0006807,GO:0006950,GO:0006974,GO:0008150,GO:0008152,GO:0009987,GO:0016787,GO:0016798,GO:0016799,GO:0019104,GO:0033554,GO:0034641,GO:0043170,GO:0044237,GO:0044238,GO:0044260,GO:0046483,GO:0050896,GO:0051716,GO:0071704,GO:0090304,GO:0097506,GO:0097510,GO:0140097,GO:1901360 3.2.2.27 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001679 346.0
DYD1_k127_5358241_3 nuclear chromosome segregation K09892 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005583 343.0
DYD1_k127_5358241_4 Protein of unknown function (DUF3109) - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000001175 287.0
DYD1_k127_5358241_5 protein affecting Mg2 Co2 transport K06195 - - 0.0000000000000000000000000000000000000000000000000000000000000001663 222.0
DYD1_k127_5358241_6 Methyltransferase domain - - - 0.0000000000000000000000000000000000000000000000000000000000000005459 228.0
DYD1_k127_5358241_7 binds to the 23S rRNA K02939 GO:0003674,GO:0003676,GO:0003723,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0006412,GO:0006518,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0015934,GO:0019538,GO:0022625,GO:0022626,GO:0032991,GO:0034641,GO:0034645,GO:0043043,GO:0043170,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:0071704,GO:0097159,GO:1901363,GO:1901564,GO:1901566,GO:1901576,GO:1990904 - 0.0000000000000000000000000000000000000000000000000000000001911 206.0
DYD1_k127_5358241_8 Binds together with S18 to 16S ribosomal RNA K02990 GO:0003674,GO:0003676,GO:0003723,GO:0003735,GO:0005198,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0015935,GO:0019843,GO:0022626,GO:0022627,GO:0032991,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:0070181,GO:0097159,GO:1901363,GO:1990904 - 0.0000000000000000000000000000000000000000000000000004697 186.0
DYD1_k127_5358241_9 Binds as a heterodimer with protein S6 to the central domain of the 16S rRNA, where it helps stabilize the platform of the 30S subunit K02963 GO:0003674,GO:0003735,GO:0005198,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0006412,GO:0006518,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0015935,GO:0019538,GO:0022626,GO:0022627,GO:0032991,GO:0034641,GO:0034645,GO:0043043,GO:0043170,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:0071704,GO:1901564,GO:1901566,GO:1901576,GO:1990904 - 0.000000000000000000000000000000000000217 142.0
DYD1_k127_5386607_0 Tetratricopeptide repeat - - - 0.00000000000000000000000000000000000000000000000000000000000000000005637 253.0
DYD1_k127_5411916_0 ABC transporter transmembrane region K18890 - - 3.938e-288 894.0
DYD1_k127_5411916_1 Belongs to the thiolase family K00626,K07823 - 2.3.1.174,2.3.1.9 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009331 578.0
DYD1_k127_5411916_2 Formation of pseudouridine at positions 38, 39 and 40 in the anticodon stem and loop of transfer RNAs K06173 GO:0001522,GO:0003674,GO:0003824,GO:0006139,GO:0006396,GO:0006399,GO:0006400,GO:0006725,GO:0006807,GO:0008033,GO:0008150,GO:0008152,GO:0009451,GO:0009982,GO:0009987,GO:0010467,GO:0016070,GO:0016853,GO:0016866,GO:0031119,GO:0034470,GO:0034641,GO:0034660,GO:0043170,GO:0043412,GO:0044237,GO:0044238,GO:0046483,GO:0071704,GO:0090304,GO:1901360 5.4.99.12 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001141 304.0
DYD1_k127_5411916_4 Thiol-specific peroxidase that catalyzes the reduction of hydrogen peroxide and organic hydroperoxides to water and alcohols, respectively. Plays a role in cell protection against oxidative stress by detoxifying peroxides K11065 - 1.11.1.15 0.00000000000000000000000000000000000000000000000000000000000004587 217.0
DYD1_k127_5411916_5 ABC transporter transmembrane region K18889 - - 0.000000000000000000000000000000000000008738 146.0
DYD1_k127_5411916_7 Amidohydrolase family - - - 0.0000002191 54.0
DYD1_k127_5417728_0 PFAM TonB-dependent Receptor Plug - - - 4.337e-258 816.0
DYD1_k127_5417728_1 TIGRFAM RNA polymerase sigma factor, sigma-70 family K03088 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000992 246.0
DYD1_k127_5417728_3 Protein of unknown function (DUF1761) - - - 0.0000000000000000005882 88.0
DYD1_k127_5417728_4 Protein of unknown function (DUF1761) - - - 0.0000000000000001141 81.0
DYD1_k127_5417728_5 Domain of unknown function (DUF4249) - - - 0.0000000004887 70.0
DYD1_k127_5418286_0 Catalyzes the attachment of L-aspartate to tRNA(Asp) in a two-step reaction L-aspartate is first activated by ATP to form Asp-AMP and then transferred to the acceptor end of tRNA(Asp) K01876 - 6.1.1.12 1.898e-309 957.0
DYD1_k127_5418286_1 Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain (MocR family) and their eukaryotic orthologs - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007706 563.0
DYD1_k127_5418286_10 Catalyzes the deamination of adenosine to inosine at the wobble position 34 of tRNA(Arg2) K11991 - 3.5.4.33 0.00000000000000000000000000000000000000000000000000000000000005464 216.0
DYD1_k127_5418286_11 - - - - 0.000000000000000000000000000000000000000000000001684 180.0
DYD1_k127_5418286_12 Cupin 2, conserved barrel domain protein - - - 0.0000000000000000000000000000000000000000005887 160.0
DYD1_k127_5418286_13 protein kinase activity - - - 0.000000000000000000000000000000000000000003515 166.0
DYD1_k127_5418286_14 Acetyltransferase (GNAT) domain - - - 0.000000000000000000000000000000000000000019 156.0
DYD1_k127_5418286_15 Domain of unknown function (DUF3127) - - - 0.00000000000000000000000000000000000004063 145.0
DYD1_k127_5418286_16 Transcription elongation factor - - - 0.0000000000000000000000000000002934 127.0
DYD1_k127_5418286_17 Protein of unknown function (DUF1761) - - - 0.0000000000000000000000000000006968 123.0
DYD1_k127_5418286_18 DinB family - - - 0.0000000000000000000000000000008088 127.0
DYD1_k127_5418286_19 outer membrane autotransporter barrel domain protein - - - 0.000000000000000000000000000006057 133.0
DYD1_k127_5418286_2 Branched-chain amino acid aminotransferase K00826 - 2.6.1.42 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004573 441.0
DYD1_k127_5418286_20 - - - - 0.00000000000000003644 83.0
DYD1_k127_5418286_3 Uncharacterised 5xTM membrane BCR, YitT family COG1284 - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001024 401.0
DYD1_k127_5418286_4 NADPH:quinone reductase activity - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001037 355.0
DYD1_k127_5418286_5 Destroys radicals which are normally produced within the cells and which are toxic to biological systems K04564 - 1.15.1.1 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004919 321.0
DYD1_k127_5418286_6 Ornithine cyclodeaminase/mu-crystallin family K01750 - 4.3.1.12 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000003491 303.0
DYD1_k127_5418286_7 - - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000006822 265.0
DYD1_k127_5418286_8 metabolite transporter - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000002393 257.0
DYD1_k127_5418286_9 Pyridoxamine 5'-phosphate oxidase K07005 - - 0.000000000000000000000000000000000000000000000000000000000000000009644 230.0
DYD1_k127_5424213_0 Cell division protein FtsI penicillin-binding protein 2 K03587 - 3.4.16.4 6.637e-310 962.0
DYD1_k127_5424213_1 Catalyzes the addition of meso-diaminopimelic acid to the nucleotide precursor UDP-N-acetylmuramoyl-L-alanyl-D-glutamate (UMAG) in the biosynthesis of bacterial cell-wall peptidoglycan K01928 - 6.3.2.13 1.414e-220 693.0
DYD1_k127_5424213_2 First step of the lipid cycle reactions in the biosynthesis of the cell wall peptidoglycan K01000 - 2.7.8.13 8.363e-205 643.0
DYD1_k127_5424213_3 Belongs to the SEDS family K03588 - - 3.368e-194 611.0
DYD1_k127_5424213_4 Cell wall formation. Catalyzes the addition of glutamate to the nucleotide precursor UDP-N-acetylmuramoyl-L-alanine (UMA) K01925 - 6.3.2.9 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006951 525.0
DYD1_k127_5424213_5 Cell wall formation. Catalyzes the transfer of a GlcNAc subunit on undecaprenyl-pyrophosphoryl-MurNAc-pentapeptide (lipid intermediate I) to form undecaprenyl-pyrophosphoryl-MurNAc- (pentapeptide)GlcNAc (lipid intermediate II) K02563 - 2.4.1.227 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008529 366.0
DYD1_k127_5424213_6 - - - - 0.000000000000000000000000000000004636 131.0
DYD1_k127_5424213_7 Specifically methylates the N4 position of cytidine in position 1402 (C1402) of 16S rRNA K03438 GO:0000154,GO:0001510,GO:0003674,GO:0003824,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006139,GO:0006364,GO:0006396,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0008168,GO:0008170,GO:0008173,GO:0008649,GO:0008757,GO:0009451,GO:0009987,GO:0010467,GO:0016070,GO:0016072,GO:0016434,GO:0016740,GO:0016741,GO:0022613,GO:0031167,GO:0032259,GO:0034470,GO:0034641,GO:0034660,GO:0042254,GO:0043170,GO:0043412,GO:0043414,GO:0044085,GO:0044237,GO:0044238,GO:0044260,GO:0044424,GO:0044464,GO:0046483,GO:0070475,GO:0071424,GO:0071704,GO:0071840,GO:0090304,GO:0140098,GO:0140102,GO:1901360 2.1.1.199 0.00002367 46.0
DYD1_k127_5479614_0 Belongs to the peptidase M16 family - - - 4.05e-322 1013.0
DYD1_k127_5479614_1 Allows the formation of correctly charged Gln-tRNA(Gln) through the transamidation of misacylated Glu-tRNA(Gln) in organisms which lack glutaminyl-tRNA synthetase. The reaction takes place in the presence of glutamine and ATP through an activated gamma-phospho-Glu-tRNA(Gln) K01426,K02433 - 3.5.1.4,6.3.5.6,6.3.5.7 2.037e-248 775.0
DYD1_k127_5479614_10 RF-1 domain K15034 - - 0.00000000000000000000000000000000004817 138.0
DYD1_k127_5479614_11 Ketosteroid isomerase-related protein - - - 0.0000000000000000000000000000000006617 137.0
DYD1_k127_5479614_12 YCII-related domain - - - 0.00000000000000000000000000000002935 128.0
DYD1_k127_5479614_13 Protein of unknown function (DUF3641) - - - 0.000000000000000000000000008377 113.0
DYD1_k127_5479614_16 Uncharacterized protein conserved in bacteria (DUF2141) - - - 0.00000000000002491 80.0
DYD1_k127_5479614_17 PFAM PspC domain K03973 - - 0.000000000002306 68.0
DYD1_k127_5479614_18 - - - - 0.000000008828 63.0
DYD1_k127_5479614_2 Oxidoreductase - - - 9.911e-243 757.0
DYD1_k127_5479614_20 Extracellular repeat protein, HAF family - - - 0.0001277 49.0
DYD1_k127_5479614_3 Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released K03086 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001667 449.0
DYD1_k127_5479614_4 COGs COG1235 Metal-dependent hydrolase of the beta-lactamase superfamily I - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001464 337.0
DYD1_k127_5479614_5 Haemolysin-III related K11068 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000006727 266.0
DYD1_k127_5479614_6 Predicted membrane protein (DUF2214) K08983 - - 0.0000000000000000000000000000000000000000000000000000000000007166 213.0
DYD1_k127_5479614_7 PFAM Glyoxalase bleomycin resistance protein dioxygenase K01759 - 4.4.1.5 0.00000000000000000000000000000000000000000000000001418 183.0
DYD1_k127_5479614_9 Stress responsive A/B Barrel Domain - - - 0.0000000000000000000000000000000000000000006446 160.0
DYD1_k127_5499985_0 Fatty acid desaturase K00496 - 1.14.15.3 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002145 524.0
DYD1_k127_5499985_1 Phosphatidylserine decarboxylase K01613 - 4.1.1.65 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002168 413.0
DYD1_k127_5499985_2 Beta-lactamase class C and other penicillin binding - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004113 376.0
DYD1_k127_5499985_3 formate dehydrogenase (NAD+) activity K00123,K05299 - 1.17.1.10,1.17.1.9 0.0000000000000000000000000000000000000000006729 160.0
DYD1_k127_5512890_0 Cation transporter/ATPase, N-terminus K01537 - 3.6.3.8 0.0 1081.0
DYD1_k127_5512890_1 PD-(D/E)XK nuclease superfamily - - - 4.584e-222 717.0
DYD1_k127_553236_0 PFAM Gamma-glutamyltranspeptidase K00681 - 2.3.2.2,3.4.19.13 1.642e-217 688.0
DYD1_k127_553236_1 Belongs to the ompA family - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001758 466.0
DYD1_k127_553236_2 transcriptional regulator - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000001129 253.0
DYD1_k127_553236_3 Belongs to the DNA glycosylase MPG family K03652 - 3.2.2.21 0.00000000000000000000000000000000000000000000000000000000000000006109 228.0
DYD1_k127_553236_4 Protein of unknown function (DUF2911) - - - 0.0000000000000000000137 93.0
DYD1_k127_553236_5 - - - - 0.0000000006455 60.0
DYD1_k127_5547669_0 histidine kinase-, DNA gyrase B - - - 7.447e-275 862.0
DYD1_k127_5547669_1 Peptidase family M48 - - - 1.698e-220 692.0
DYD1_k127_5547669_10 Outer membrane protein beta-barrel domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000001776 241.0
DYD1_k127_5547669_11 Endonuclease Exonuclease Phosphatase - - - 0.000000000000000000000000000000000000000000000000000000000000000000005567 241.0
DYD1_k127_5547669_12 cheY-homologous receiver domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000785 232.0
DYD1_k127_5547669_13 Belongs to the MlaE permease family K02066 - - 0.0000000000000000000000000000000000000000000000000000000000000000006594 230.0
DYD1_k127_5547669_14 Belongs to the ompA family - - - 0.00000000000000000000000000000000000000000000000000000000000000001636 230.0
DYD1_k127_5547669_15 Outer membrane protein beta-barrel domain - - - 0.00000000000000000000000000000000000000000000000000000000004309 211.0
DYD1_k127_5547669_16 Belongs to the MlaE permease family K02066 - - 0.000000000000000000000000000000000000000000000000532 177.0
DYD1_k127_5547669_17 Cupin domain protein - - - 0.000000000000000000000000000000000000000000001911 167.0
DYD1_k127_5547669_18 - - - - 0.00000000000000000000000000000006176 130.0
DYD1_k127_5547669_19 Gram-negative bacterial TonB protein C-terminal - - - 0.0000000000000000000001102 105.0
DYD1_k127_5547669_2 Sodium proton antiporter K03316 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006632 552.0
DYD1_k127_5547669_20 - - - - 0.0000000000000000001014 89.0
DYD1_k127_5547669_22 - - - - 0.0000000000000000003652 91.0
DYD1_k127_5547669_23 - - - - 0.0000000000000000005736 89.0
DYD1_k127_5547669_24 - - - - 0.000000000000000002427 89.0
DYD1_k127_5547669_25 - - - - 0.000000000000000008511 89.0
DYD1_k127_5547669_26 - - - - 0.000000000000004593 76.0
DYD1_k127_5547669_27 - - - - 0.0000000000000116 76.0
DYD1_k127_5547669_29 - - - - 0.000000000008874 66.0
DYD1_k127_5547669_3 Organic solvent ABC transporter ATP-binding protein K02065 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006214 380.0
DYD1_k127_5547669_30 gas vesicle protein - - - 0.0000000003534 64.0
DYD1_k127_5547669_31 - - - - 0.0000283 51.0
DYD1_k127_5547669_4 Part of the outer membrane protein assembly complex, which is involved in assembly and insertion of beta-barrel proteins into the outer membrane - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002933 390.0
DYD1_k127_5547669_5 Protein of unknown function (DUF3494) - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001831 382.0
DYD1_k127_5547669_6 MlaD protein K02067 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002792 368.0
DYD1_k127_5547669_7 TIGRFAM YihY family protein (not ribonuclease BN) K07058 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005589 325.0
DYD1_k127_5547669_8 AI-2E family transporter - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002765 317.0
DYD1_k127_5547669_9 PFAM Bacterial regulatory helix-turn-helix proteins, AraC family - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000002426 273.0
DYD1_k127_5573067_0 - Catabolite gene activator and regulatory subunit of cAMP-dependent protein - - - 0.0 1073.0
DYD1_k127_5573067_1 WD40 repeats - - - 1.579e-317 986.0
DYD1_k127_5573067_10 Zn-ribbon protein, possibly nucleic acid-binding K07164 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002138 353.0
DYD1_k127_5573067_11 PFAM chorismate binding enzyme K02361,K02552 - 5.4.4.2 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009432 359.0
DYD1_k127_5573067_12 PFAM Mandelate racemase muconate lactonizing enzyme, C-terminal domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000137 357.0
DYD1_k127_5573067_13 Helix-turn-helix XRE-family like proteins - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002182 344.0
DYD1_k127_5573067_14 Transfers the gamma-phosphate of ATP to the 4'-position of a tetraacyldisaccharide 1-phosphate intermediate (termed DS-1- P) to form tetraacyldisaccharide 1,4'-bis-phosphate (lipid IVA) K00912 - 2.7.1.130 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001288 344.0
DYD1_k127_5573067_15 Hydroxylase for synthesis of 2-methylthio-cis-ribozeatin in tRNA K06169 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008473 307.0
DYD1_k127_5573067_16 pfkB family carbohydrate kinase K00847 - 2.7.1.4 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000007634 299.0
DYD1_k127_5573067_17 Acyl-CoA synthetase (AMP-forming) AMP-acid ligase II K01911 - 6.2.1.26 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000008278 299.0
DYD1_k127_5573067_18 phosphoglycerate mutase family - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000004196 272.0
DYD1_k127_5573067_19 TPR repeat-containing protein - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000002417 284.0
DYD1_k127_5573067_2 - - - - 3.526e-224 699.0
DYD1_k127_5573067_20 PFAM thioesterase superfamily K19222 - 3.1.2.28 0.000000000000000000000000000000000000000000000000000001 195.0
DYD1_k127_5573067_21 COG2755 Lysophospholipase L1 and related - - - 0.00000000000000000000000000003549 119.0
DYD1_k127_5573067_3 Catalyzes the thiamine diphosphate-dependent decarboxylation of 2-oxoglutarate and the subsequent addition of the resulting succinic semialdehyde-thiamine pyrophosphate anion to isochorismate to yield 2-succinyl-5-enolpyruvyl-6-hydroxy-3- cyclohexene-1-carboxylate (SEPHCHC) K02551 - 2.2.1.9 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007638 574.0
DYD1_k127_5573067_4 ABC-type antimicrobial peptide transport system, permease component K02004 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008272 547.0
DYD1_k127_5573067_5 - - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004866 546.0
DYD1_k127_5573067_6 Converts o-succinylbenzoyl-CoA (OSB-CoA) to 1,4- dihydroxy-2-naphthoyl-CoA (DHNA-CoA) K01661 - 4.1.3.36 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002358 478.0
DYD1_k127_5573067_7 Belongs to the GTP cyclohydrolase I type 2 NIF3 family - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001219 481.0
DYD1_k127_5573067_8 Putative porin - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001386 467.0
DYD1_k127_5573067_9 Transfers and isomerizes the ribose moiety from AdoMet to the 7-aminomethyl group of 7-deazaguanine (preQ1-tRNA) to give epoxyqueuosine (oQ-tRNA) K07568 - 2.4.99.17 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003683 435.0
DYD1_k127_5591550_0 TIGRFAM Aspartate kinase K12524 - 1.1.1.3,2.7.2.4 2.033e-310 970.0
DYD1_k127_5591550_1 Catalyzes the dehydration of 2,3-dihydroxy-3-methylbutanoate to 3-methyl-2-oxobutanoate in valine and isoleucine biosynthesis K01687 - 4.2.1.9 1.474e-274 852.0
DYD1_k127_5591550_2 Catalyzes the isomerization between 2-isopropylmalate and 3-isopropylmalate, via the formation of 2-isopropylmaleate K01703 - 4.2.1.33,4.2.1.35 4.199e-252 782.0
DYD1_k127_5591550_3 Thiamine pyrophosphate enzyme, central domain K01652 - 2.2.1.6 3.147e-237 746.0
DYD1_k127_5591550_4 Involved in the biosynthesis of branched-chain amino acids (BCAA). Catalyzes an alkyl-migration followed by a ketol- acid reduction of (S)-2-acetolactate (S2AL) to yield (R)-2,3- dihydroxy-isovalerate. In the isomerase reaction, S2AL is rearranged via a Mg-dependent methyl migration to produce 3- hydroxy-3-methyl-2-ketobutyrate (HMKB). In the reductase reaction, this 2-ketoacid undergoes a metal-dependent reduction by NADPH to yield (R)-2,3-dihydroxy-isovalerate K00053 - 1.1.1.86 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001276 590.0
DYD1_k127_5591550_5 Catalyzes the anaerobic formation of alpha-ketobutyrate and ammonia from threonine in a two-step reaction. The first step involved a dehydration of threonine and a production of enamine intermediates (aminocrotonate), which tautomerizes to its imine form (iminobutyrate). Both intermediates are unstable and short- lived. The second step is the nonenzymatic hydrolysis of the enamine imine intermediates to form 2-ketobutyrate and free ammonia. In the low water environment of the cell, the second step is accelerated by RidA K01754 - 4.3.1.19 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006578 563.0
DYD1_k127_5591550_6 Belongs to the class-IV pyridoxal-phosphate-dependent aminotransferase family K00826 - 2.6.1.42 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001739 398.0
DYD1_k127_5591550_7 Catalyzes the isomerization between 2-isopropylmalate and 3-isopropylmalate, via the formation of 2-isopropylmaleate K01704 - 4.2.1.33,4.2.1.35 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000001604 284.0
DYD1_k127_5591550_8 Catalyzes the oxidation of 3-carboxy-2-hydroxy-4- methylpentanoate (3-isopropylmalate) to 3-carboxy-4-methyl-2- oxopentanoate. The product decarboxylates to 4-methyl-2 oxopentanoate K00052 - 1.1.1.85 0.00000000000000000000000000000000000000000000000000000000000000000000000000001191 261.0
DYD1_k127_5618169_0 The glycine cleavage system catalyzes the degradation of glycine. The P protein binds the alpha-amino group of glycine through its pyridoxal phosphate cofactor K00281,K00283 - 1.4.4.2 0.0 1451.0
DYD1_k127_5618169_1 phosphoesterase RecJ domain protein K06881 - 3.1.13.3,3.1.3.7 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005489 412.0
DYD1_k127_5618169_2 FKBP-type peptidyl-prolyl cis-trans isomerase - - - 0.0000000000000000000000000000000000000000000000000000000000000000002269 241.0
DYD1_k127_5618169_3 Major role in the synthesis of nucleoside triphosphates other than ATP. The ATP gamma phosphate is transferred to the NDP beta phosphate via a ping-pong mechanism, using a phosphorylated active-site intermediate K00940 - 2.7.4.6 0.000000000000000000000000000000000000000000000000000000000000000008706 227.0
DYD1_k127_5618169_4 FKBP-type peptidyl-prolyl cis-trans isomerase - - - 0.000001032 53.0
DYD1_k127_5625959_0 amino acids such as threonine, to avoid such errors, it has a posttransfer editing activity that hydrolyzes mischarged Thr-tRNA(Val) in a tRNA-dependent manner K01873 GO:0003674,GO:0003824,GO:0004812,GO:0004832,GO:0006082,GO:0006139,GO:0006399,GO:0006412,GO:0006418,GO:0006438,GO:0006518,GO:0006520,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0016070,GO:0016874,GO:0016875,GO:0019538,GO:0019752,GO:0034641,GO:0034645,GO:0034660,GO:0043038,GO:0043039,GO:0043043,GO:0043170,GO:0043436,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044281,GO:0046483,GO:0071704,GO:0090304,GO:0140098,GO:0140101,GO:1901360,GO:1901564,GO:1901566,GO:1901576 6.1.1.9 0.0 1272.0
DYD1_k127_5625959_1 CheY-like receiver AAA-type ATPase and DNA-binding domains - - - 6.349e-262 814.0
DYD1_k127_5625959_10 Pyruvate 2-oxoglutarate dehydrogenase complex, dehydrogenase K00162 - 1.2.4.1 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001099 574.0
DYD1_k127_5625959_11 SMART Metal-dependent phosphohydrolase, HD region K06885 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009966 565.0
DYD1_k127_5625959_12 tRNA synthetase class II core domain (G, H, P, S and T) K01892 - 6.1.1.21 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000146 543.0
DYD1_k127_5625959_13 Catalyzes the N-acylation of UDP-3-O-acylglucosamine using 3-hydroxyacyl-ACP as the acyl donor. Is involved in the biosynthesis of lipid A, a phosphorylated glycolipid that anchors the lipopolysaccharide to the outer membrane of the cell K02536 - 2.3.1.191 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000501 519.0
DYD1_k127_5625959_14 PFAM von Willebrand factor type A K07114 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009686 483.0
DYD1_k127_5625959_15 protein (some members contain a von Willebrand factor type A (vWA) domain) - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005818 456.0
DYD1_k127_5625959_16 Involved in the biosynthesis of lipid A, a phosphorylated glycolipid that anchors the lipopolysaccharide to the outer membrane of the cell K00677 - 2.3.1.129 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002641 417.0
DYD1_k127_5625959_17 NOL1 NOP2 sun family protein - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000175 424.0
DYD1_k127_5625959_18 PFAM Flavin reductase like domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001255 392.0
DYD1_k127_5625959_19 C-terminal domain of CHU protein family - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005657 405.0
DYD1_k127_5625959_2 Catalyzes the hydrolysis of UDP-3-O-myristoyl-N- acetylglucosamine to form UDP-3-O-myristoylglucosamine and acetate, the committed step in lipid A biosynthesis K16363 - 3.5.1.108,4.2.1.59 1.782e-261 811.0
DYD1_k127_5625959_20 PFAM Glycosyl transferase family 2 K07011 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003575 383.0
DYD1_k127_5625959_21 PFAM NADP oxidoreductase coenzyme F420-dependent K06988 - 1.5.1.40 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000001754 284.0
DYD1_k127_5625959_22 Major facilitator Superfamily - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000002502 281.0
DYD1_k127_5625959_23 Pyridoxal 5'-phosphate (PLP)-binding protein, which is involved in PLP homeostasis K06997 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000001396 271.0
DYD1_k127_5625959_24 TIGRFAM phosphoesterase, MJ0936 family K07095 - - 0.000000000000000000000000000000000000000000000000000000000000000000000007178 245.0
DYD1_k127_5625959_25 - - - - 0.000000000000000000000000000000000000000000000000000000000000000000003817 244.0
DYD1_k127_5625959_26 PFAM ABC transporter K02193 - 3.6.3.41 0.0000000000000000000000000000000000000000000000000000000000001874 217.0
DYD1_k127_5625959_27 PFAM Lysine exporter protein (LYSE YGGA) - - - 0.0000000000000000000000000000000000000000000000000107 187.0
DYD1_k127_5625959_28 PFAM Uncharacterised P-loop hydrolase UPF0079 K06925 - - 0.000000000000000000000000000000000000000003104 159.0
DYD1_k127_5625959_29 DoxX - - - 0.000000000000000000000000000000000009939 139.0
DYD1_k127_5625959_3 GH3 auxin-responsive promoter - - - 1.073e-255 796.0
DYD1_k127_5625959_30 PFAM PspC domain - - - 0.000000000000000000000000000004779 120.0
DYD1_k127_5625959_31 Binds to DNA and alters its conformation. May be involved in regulation of gene expression, nucleoid organization and DNA protection K09747 - - 0.000000000000000000000000000006989 121.0
DYD1_k127_5625959_33 Domain of unknown function (DUF4296) - - - 0.0000000000000001359 84.0
DYD1_k127_5625959_4 Endonuclease that is involved in the suppression of homologous recombination and may therefore have a key role in the control of bacterial genetic diversity K07456 - - 7.749e-232 741.0
DYD1_k127_5625959_5 Histidine ammonia-lyase K01745 - 4.3.1.3 1.575e-226 710.0
DYD1_k127_5625959_6 Tetratricopeptide repeat protein - - - 3.601e-221 700.0
DYD1_k127_5625959_7 fumarylacetoacetate (FAA) hydrolase K01555 - 3.7.1.2 3.794e-212 664.0
DYD1_k127_5625959_8 PFAM Alanine dehydrogenase PNT, C-terminal domain K00259 - 1.4.1.1 2.804e-199 627.0
DYD1_k127_5625959_9 Peptidase dimerisation domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003857 600.0
DYD1_k127_562937_0 Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released K03086 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001825 398.0
DYD1_k127_562937_1 Belongs to the short-chain dehydrogenases reductases (SDR) family - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000137 335.0
DYD1_k127_562937_2 PLD-like domain - - - 0.000000000000000000000000000000000000000000000000000008184 196.0
DYD1_k127_562937_3 FAD binding domain K05712 - 1.14.13.127 0.0000000000000000000000000000000000000000000000001218 179.0
DYD1_k127_562937_4 Malonate/sodium symporter MadM subunit - - - 0.00000000000000000000000000000000000000000000009769 171.0
DYD1_k127_562937_5 Malonate/sodium symporter MadM subunit - - - 0.0000000000000000000000000000000000000000002255 160.0
DYD1_k127_562937_6 Malonate transporter MadL subunit - - - 0.000000000000000000000000000000000005319 140.0
DYD1_k127_562937_7 protein targeting K03070 GO:0000166,GO:0003674,GO:0003824,GO:0005215,GO:0005488,GO:0005524,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005886,GO:0005887,GO:0006810,GO:0008104,GO:0008144,GO:0008150,GO:0008320,GO:0008565,GO:0015031,GO:0015399,GO:0015405,GO:0015440,GO:0015450,GO:0015462,GO:0015833,GO:0016020,GO:0016021,GO:0016462,GO:0016787,GO:0016817,GO:0016818,GO:0016887,GO:0017076,GO:0017111,GO:0022804,GO:0022857,GO:0022884,GO:0030554,GO:0031224,GO:0031226,GO:0031522,GO:0032553,GO:0032555,GO:0032559,GO:0032991,GO:0033036,GO:0033220,GO:0035639,GO:0036094,GO:0042623,GO:0042626,GO:0042886,GO:0042887,GO:0043167,GO:0043168,GO:0043492,GO:0043952,GO:0044424,GO:0044425,GO:0044444,GO:0044459,GO:0044464,GO:0045184,GO:0051179,GO:0051234,GO:0055085,GO:0071702,GO:0071705,GO:0071806,GO:0071944,GO:0097159,GO:0097367,GO:1901265,GO:1901363,GO:1904680 - 0.00000000000000000000002633 106.0
DYD1_k127_5643700_0 COG2366 Protein related to penicillin acylase K07116 - 3.5.1.97 9.086e-296 923.0
DYD1_k127_5643700_1 FtsX-like permease family K02004 - - 1.142e-244 779.0
DYD1_k127_5643700_10 Dioxygenase K03381 - 1.13.11.1 0.000000000000000000000000000000000000000000000000000009039 201.0
DYD1_k127_5643700_11 Inward rectifier potassium channel K08715 - - 0.00000000000000000000000000000000000000000000000004781 188.0
DYD1_k127_5643700_12 - - - - 0.00000000000000000000000000000000000000000000003982 184.0
DYD1_k127_5643700_13 Domain of unknown function (DUF1905) - - - 0.000000000000000000000000000000008994 129.0
DYD1_k127_5643700_14 Tautomerase enzyme K01821 - 5.3.2.6 0.0000000000006878 70.0
DYD1_k127_5643700_16 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily - - - 0.000001737 56.0
DYD1_k127_5643700_18 CHAD domain - - - 0.0004311 51.0
DYD1_k127_5643700_2 Belongs to the class-V pyridoxal-phosphate-dependent aminotransferase family. PhnW subfamily K00830,K03430 - 2.6.1.37,2.6.1.44,2.6.1.45,2.6.1.51 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002054 582.0
DYD1_k127_5643700_3 Putative cyclase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006264 549.0
DYD1_k127_5643700_4 Pyruvate kinase, barrel domain K00873 - 2.7.1.40 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002153 407.0
DYD1_k127_5643700_5 Cyclic nucleotide-binding domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000001488 269.0
DYD1_k127_5643700_6 PPIases accelerate the folding of proteins. It catalyzes the cis-trans isomerization of proline imidic peptide bonds in oligopeptides K03767,K03768 - 5.2.1.8 0.000000000000000000000000000000000000000000000000000000000000000000000000003402 254.0
DYD1_k127_5643700_7 TspO/MBR family K05770 - - 0.00000000000000000000000000000000000000000000000000000000000002441 218.0
DYD1_k127_5643700_8 ECF sigma factor K03088 - - 0.000000000000000000000000000000000000000000000000000000003612 205.0
DYD1_k127_5643700_9 Acetyltransferase (GNAT) domain K03829 - - 0.000000000000000000000000000000000000000000000000000002572 195.0
DYD1_k127_5663453_0 Involved in the restart of stalled replication forks. Recognizes and binds the arrested nascent DNA chain at stalled replication forks. It can open the DNA duplex, via its helicase activity, and promote assembly of the primosome and loading of the major replicative helicase DnaB onto DNA K04066 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009491 419.0
DYD1_k127_5663453_1 Putative adhesin - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001073 331.0
DYD1_k127_5663453_2 COGs COG1331 Highly conserved protein containing a thioredoxin domain K06888 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000743 279.0
DYD1_k127_5663453_3 TPM domain - - - 0.000000000000000000000000000000000000000000000000000000002476 208.0
DYD1_k127_5672291_0 Sortilin, neurotensin receptor 3, - - - 0.0 1063.0
DYD1_k127_5672291_1 Sortilin, neurotensin receptor 3, - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001188 565.0
DYD1_k127_5672291_2 PA domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008577 375.0
DYD1_k127_5672291_3 Sortilin, neurotensin receptor 3, - - - 0.00000000000000000000000000000000003391 137.0
DYD1_k127_5747624_0 Bifunctional enzyme with both catalase and broad- spectrum peroxidase activity K03782 - 1.11.1.21 0.0 1271.0
DYD1_k127_5747624_1 COG1529 Aerobic-type carbon monoxide dehydrogenase large subunit CoxL CutL homologs K07303 - 1.3.99.16 0.0 1154.0
DYD1_k127_5747624_10 PFAM 3-carboxy-cis,cis-muconate lactonizing enzyme K07404 - 3.1.1.31 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003001 428.0
DYD1_k127_5747624_11 transcriptional regulator K04761 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002608 379.0
DYD1_k127_5747624_12 Metallo-beta-lactamase superfamily K17837 - 3.5.2.6 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003289 372.0
DYD1_k127_5747624_13 - - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005027 372.0
DYD1_k127_5747624_14 Outer membrane efflux protein - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008983 376.0
DYD1_k127_5747624_15 with different specificities (related to short-chain alcohol - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001399 309.0
DYD1_k127_5747624_16 NUDIX domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000002471 278.0
DYD1_k127_5747624_17 Protein of unknown function (DUF4256) - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000108 271.0
DYD1_k127_5747624_18 PFAM Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000006782 290.0
DYD1_k127_5747624_19 - - - - 0.00000000000000000000000000000000000000000000000000000000000000006317 227.0
DYD1_k127_5747624_2 Forms oxaloacetate, a four-carbon dicarboxylic acid source for the tricarboxylic acid cycle K01595 - 4.1.1.31 3.398e-318 994.0
DYD1_k127_5747624_20 Domain of unknown function (DUF4386) - - - 0.0000000000000000000000000000000000000000000000000000000000001495 219.0
DYD1_k127_5747624_21 domain, Protein - - - 0.0000000000000000000000000000000000000000000000000000002717 217.0
DYD1_k127_5747624_22 - - - - 0.000000000000000000000000000000000000000000000001249 191.0
DYD1_k127_5747624_23 Methyltransferase domain - - - 0.00000000000000000000000000000002538 132.0
DYD1_k127_5747624_24 DinB family - - - 0.000000000000000000000000000001062 127.0
DYD1_k127_5747624_25 Tetratricopeptide repeat - - - 0.00000000000000000000000000001493 127.0
DYD1_k127_5747624_26 - - - - 0.0000000000005186 74.0
DYD1_k127_5747624_27 Adenylate and Guanylate cyclase catalytic domain - - - 0.00000001712 57.0
DYD1_k127_5747624_28 - - - - 0.00003588 48.0
DYD1_k127_5747624_3 Fibronectin type III-like domain K05349 - 3.2.1.21 1.804e-295 925.0
DYD1_k127_5747624_4 Catalyzes the formation of ADP-glucose and diphosphate from ATP and alpha-D-glucose 1-phosphate K00975 - 2.7.7.27 2.111e-207 651.0
DYD1_k127_5747624_5 PQQ-like domain - - - 2.329e-207 663.0
DYD1_k127_5747624_6 Transglutaminase/protease-like homologues - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001116 607.0
DYD1_k127_5747624_7 Glycosyltransferase, group 1 family protein - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001456 604.0
DYD1_k127_5747624_8 FtsX-like permease family - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002776 603.0
DYD1_k127_5747624_9 alcohol dehydrogenase K13979 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006993 554.0
DYD1_k127_5763915_0 3'-5' exoribonuclease that releases 5'-nucleoside monophosphates and is involved in maturation of structured RNAs K12573,K12585 - - 7.794e-307 954.0
DYD1_k127_5763915_1 Catalyzes the interconversion of L-alanine and D- alanine. May also act on other amino acids K01775,K01929 - 5.1.1.1,6.3.2.10 2.189e-280 883.0
DYD1_k127_5763915_10 FAD binding domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000163 417.0
DYD1_k127_5763915_11 PFAM chalcone and stilbene - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000193 414.0
DYD1_k127_5763915_12 RelA SpoT domain protein - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001227 393.0
DYD1_k127_5763915_13 OmpA family - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003751 403.0
DYD1_k127_5763915_14 Belongs to the NadC ModD family K00767 - 2.4.2.19 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004481 383.0
DYD1_k127_5763915_16 Belongs to the FPP GGPP synthase family K13789 - 2.5.1.1,2.5.1.10,2.5.1.29 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001872 368.0
DYD1_k127_5763915_17 UbiA prenyltransferase family K02548 - 2.5.1.74 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003917 352.0
DYD1_k127_5763915_18 ligase activity - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006896 354.0
DYD1_k127_5763915_19 PFAM Bacterial regulatory helix-turn-helix protein, lysR family - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006361 348.0
DYD1_k127_5763915_2 transporter of a GTP-driven Fe(2 ) uptake system K04759 - - 1.51e-268 843.0
DYD1_k127_5763915_20 1-(5-phosphoribosyl)-5- (5-phosphoribosylamino)methylideneamino imidazole-4-carboxamide isomerase K01814 - 5.3.1.16 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000774 342.0
DYD1_k127_5763915_21 Zn-dependent dipeptidase, microsomal dipeptidase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002016 356.0
DYD1_k127_5763915_22 PDZ DHR GLGF domain protein - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007572 328.0
DYD1_k127_5763915_23 PFAM methyladenine glycosylase K01246 - 3.2.2.20 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006742 307.0
DYD1_k127_5763915_24 peptidase U61 LD-carboxypeptidase A K01297 - 3.4.17.13 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002161 312.0
DYD1_k127_5763915_25 Methyltransferase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000001904 288.0
DYD1_k127_5763915_26 Predicted 3'-5' exonuclease related to the exonuclease domain of PolB K07501 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000001814 274.0
DYD1_k127_5763915_27 Catalyzes the conversion of N5-carboxyaminoimidazole ribonucleotide (N5-CAIR) to 4-carboxy-5-aminoimidazole ribonucleotide (CAIR) K01588 - 5.4.99.18 0.000000000000000000000000000000000000000000000000000000000000000000000003054 246.0
DYD1_k127_5763915_28 - - - - 0.00000000000000000000000000000000000000000000000000000000000000000000002131 244.0
DYD1_k127_5763915_29 Involved in the tonB-independent uptake of proteins - - - 0.00000000000000000000000000000000000000000000000000000000000000000001447 243.0
DYD1_k127_5763915_3 Catalyzes the interconversion of 2-phosphoglycerate and 3-phosphoglycerate K15633 - 5.4.2.12 6.001e-247 770.0
DYD1_k127_5763915_30 PFAM Outer membrane protein (OmpH-like) K06142 - - 0.000000000000000000000000000000000000000000000000000000000000000002368 231.0
DYD1_k127_5763915_31 helix_turn_helix, Lux Regulon - - - 0.000000000000000000000000000000000000000000000000000000000000000002475 232.0
DYD1_k127_5763915_32 translation initiation inhibitor, yjgF family - - - 0.00000000000000000000000000000000000000000000000000000000000000006983 226.0
DYD1_k127_5763915_33 Protein of unknown function (DUF2911) - - - 0.0000000000000000000000000000000000000000000000000000000000004968 215.0
DYD1_k127_5763915_34 Belongs to the LOG family K06966 - 3.2.2.10 0.0000000000000000000000000000000000000000000000000000000001963 208.0
DYD1_k127_5763915_35 Catalyzes the transfer of endogenously produced octanoic acid from octanoyl-acyl-carrier-protein onto the lipoyl domains of lipoate-dependent enzymes. Lipoyl-ACP can also act as a substrate although octanoyl-ACP is likely to be the physiological substrate K03801 GO:0003674,GO:0003824,GO:0006464,GO:0006807,GO:0008150,GO:0008152,GO:0009249,GO:0009987,GO:0010467,GO:0016740,GO:0016746,GO:0016747,GO:0018065,GO:0018193,GO:0018205,GO:0019538,GO:0033819,GO:0036211,GO:0043170,GO:0043412,GO:0044237,GO:0044238,GO:0044260,GO:0044267,GO:0051604,GO:0071704,GO:1901564 2.3.1.181 0.0000000000000000000000000000000000000000000000000000000005462 203.0
DYD1_k127_5763915_36 PFAM Outer membrane protein (OmpH-like) K06142 - - 0.000000000000000000000000000000000000000000000000000000003927 205.0
DYD1_k127_5763915_37 LysE type translocator - - - 0.000000000000000000000000000000000000000000000000000000006631 204.0
DYD1_k127_5763915_38 monooxygenase activity - - - 0.000000000000000000000000000000000000000000000000002438 186.0
DYD1_k127_5763915_39 DinB family - - - 0.0000000000000000000000000000000000000000000000001366 182.0
DYD1_k127_5763915_4 Responsible for synthesis of pseudouridine from uracil K06180 - 5.4.99.23 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001048 553.0
DYD1_k127_5763915_40 - - - - 0.000000000000000000000000000000000000000000000004543 175.0
DYD1_k127_5763915_41 Belongs to the Fur family K03711 - - 0.00000000000000000000000000000000000000000000001173 174.0
DYD1_k127_5763915_42 Putative tRNA binding domain K01874,K01890,K04566,K06878 GO:0000049,GO:0003674,GO:0003676,GO:0003723,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006082,GO:0006139,GO:0006399,GO:0006412,GO:0006418,GO:0006518,GO:0006520,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0016070,GO:0017101,GO:0017102,GO:0019538,GO:0019752,GO:0032991,GO:0034641,GO:0034645,GO:0034660,GO:0043038,GO:0043039,GO:0043043,GO:0043170,GO:0043436,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044281,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0071704,GO:0090304,GO:0097159,GO:1901360,GO:1901363,GO:1901564,GO:1901566,GO:1901576 6.1.1.10,6.1.1.20,6.1.1.6 0.000000000000000000000000000000000000000000002038 166.0
DYD1_k127_5763915_43 Modulates RecA activity K03565 - - 0.00000000000000000000000000000000000000000001979 166.0
DYD1_k127_5763915_44 Histidine kinase - - - 0.00000000000000000000000000000000000000001786 162.0
DYD1_k127_5763915_45 Domain of unknown function (DUF4783) - - - 0.0000000000000000000000000000000000000003899 152.0
DYD1_k127_5763915_46 - - - - 0.00000000000000000000000000000000001651 141.0
DYD1_k127_5763915_47 cheY-homologous receiver domain - - - 0.00000000000000000000000000000006734 129.0
DYD1_k127_5763915_48 response regulator - - - 0.00000000000000000000000000004595 121.0
DYD1_k127_5763915_5 Outer membrane protein assembly complex, YaeT protein K07277 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001495 541.0
DYD1_k127_5763915_50 - - - - 0.00000000000000000000008975 104.0
DYD1_k127_5763915_51 FeoA K04758 - - 0.0000000000000000721 82.0
DYD1_k127_5763915_53 Transcriptional regulatory protein, C terminal K02483,K07665 - - 0.000004655 54.0
DYD1_k127_5763915_6 Catalyzes the ATP-dependent conversion of 5- aminoimidazole ribonucleotide (AIR) and HCO(3)(-) to N5- carboxyaminoimidazole ribonucleotide (N5-CAIR) K01589 - 6.3.4.18 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002487 518.0
DYD1_k127_5763915_7 Pyridoxal-phosphate dependent enzyme K01733 - 4.2.3.1 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001062 480.0
DYD1_k127_5763915_8 Peptide chain release factor 1 directs the termination of translation in response to the peptide chain termination codons UAG and UAA K02835 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000408 465.0
DYD1_k127_5763915_9 PFAM Integral membrane protein TerC K05794 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000206 446.0
DYD1_k127_5785901_0 Peptide chain release factor 2 directs the termination of translation in response to the peptide chain termination codons UGA and UAA K02836 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000263 528.0
DYD1_k127_5785901_1 Branched-chain amino acid aminotransferase K00826 - 2.6.1.42 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002257 527.0
DYD1_k127_5785901_10 - - - - 0.0004768 49.0
DYD1_k127_5785901_2 PFAM Major Facilitator Superfamily - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009446 431.0
DYD1_k127_5785901_3 ABC transporter K02003 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004527 400.0
DYD1_k127_5785901_4 Endonuclease that specifically degrades the RNA of RNA- DNA hybrids K03470 - 3.1.26.4 0.000000000000000000000000000000000000000000000000000000000000000000000000000000004644 274.0
DYD1_k127_5785901_5 PFAM Cobalamin adenosyltransferase K00798 - 2.5.1.17 0.0000000000000000000000000000000000000000000000000000000000000000000000000000005019 267.0
DYD1_k127_5785901_6 Transport and Golgi organisation 2 - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000005349 259.0
DYD1_k127_5785901_7 pfam nudix - - - 0.00000000000000000000000000000000000000000000000000000000000000001714 226.0
DYD1_k127_5785901_8 PFAM YhhN-like protein - - - 0.0000000000000000000000000000000004091 139.0
DYD1_k127_5785901_9 Putative auto-transporter adhesin, head GIN domain - - - 0.0000002018 53.0
DYD1_k127_5810065_0 PFAM FAD-dependent pyridine nucleotide-disulphide oxidoreductase K03885 - 1.6.99.3 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008078 586.0
DYD1_k127_5810065_1 alkyl hydroperoxide reductase Thiol specific antioxidant Mal allergen - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001814 571.0
DYD1_k127_5810065_2 Belongs to the FPP GGPP synthase family K02523 - 2.5.1.90 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000474 483.0
DYD1_k127_5810065_3 TIGRFAM Gliding motility-associated ABC transporter ATP-binding subunit GldA K01990 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002105 374.0
DYD1_k127_5810065_4 Sodium/calcium exchanger protein K07301 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000159 319.0
DYD1_k127_5810065_6 TIGRFAM Gliding motility-associated ABC transporter permease protein GldF K01992 - - 0.00000000000000000000000000000000000000000000004876 171.0
DYD1_k127_5810065_8 Transport of potassium into the cell K03549 - - 0.000000000002084 67.0
DYD1_k127_5907805_0 Sortilin, neurotensin receptor 3, - - - 0.0 1190.0
DYD1_k127_5907805_1 Uracil DNA glycosylase superfamily - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000004267 257.0
DYD1_k127_5971741_0 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005173 524.0
DYD1_k127_5971741_1 major facilitator superfamily K08151 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000593 324.0
DYD1_k127_5971741_2 transcriptional regulator K07665 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007821 320.0
DYD1_k127_5971741_3 PFAM Uncharacterised protein family UPF0029, Impact, N-terminal - - - 0.000000000000000000000000000000000000000000000000000000000000000005207 231.0
DYD1_k127_5971741_4 Rhodanese Homology Domain - - - 0.0000000000000000000000000000000000000000000773 166.0
DYD1_k127_5971741_5 FtsZ-dependent cytokinesis K09892,K13924 GO:0000003,GO:0000910,GO:0003674,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0007049,GO:0008150,GO:0009987,GO:0019954,GO:0022402,GO:0022414,GO:0032153,GO:0032505,GO:0042802,GO:0043093,GO:0044424,GO:0044444,GO:0044464,GO:0051301 2.1.1.80,3.1.1.61 0.0000000000000000000000000000000000000007878 159.0
DYD1_k127_5971741_6 Putative auto-transporter adhesin, head GIN domain - - - 0.00000000000000000000000000000001278 138.0
DYD1_k127_5972902_0 Alpha beta hydrolase K07019 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004388 391.0
DYD1_k127_5972902_1 PFAM Integral membrane protein TerC - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000304 281.0
DYD1_k127_5972902_2 Belongs to the SOS response-associated peptidase family - - - 0.000000000000000000000000000000000000000000000000000000000000000001145 234.0
DYD1_k127_5972902_3 Belongs to the metal hydrolase YfiT family - - - 0.000000000000000000000000000000000000000000000000000000008389 202.0
DYD1_k127_5974811_0 ATPase that binds to both the 70S ribosome and the 50S ribosomal subunit in a nucleotide-independent manner K06942 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009239 556.0
DYD1_k127_5974811_1 protein (some members contain a von Willebrand factor type A (vWA) domain) - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008346 426.0
DYD1_k127_5974811_2 Domain of unknown function (DUF5103) - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000176 399.0
DYD1_k127_5974811_3 PFAM Acyl-CoA reductase (LuxC) - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001013 370.0
DYD1_k127_5974811_4 PFAM CRISPR associated protein Cas6 K19091 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008344 343.0
DYD1_k127_5974811_5 SprB repeat - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000114 312.0
DYD1_k127_5974811_6 4Fe-4S binding domain - - - 0.000000000000000000000000000000000000000000000000000000000002622 209.0
DYD1_k127_5974811_7 TIGRFAM RNA polymerase sigma factor, sigma-70 family K03088 - - 0.0000000000000000000000000000000000000000000000000000000008968 206.0
DYD1_k127_5974811_8 Protein of unknown function (DUF3276) - - - 0.00000000000000000000000000000000000000000000000006266 181.0
DYD1_k127_5974811_9 Forms passive diffusion pores that allow small molecular weight hydrophilic materials across the outer membrane - - - 0.00000000000001755 85.0
DYD1_k127_598675_0 TonB-dependent Receptor Plug Domain - - - 0.0 1543.0
DYD1_k127_598675_1 Pfam:SusD K21572 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008376 552.0
DYD1_k127_598675_2 Belongs to the class-I aminoacyl-tRNA synthetase family K01883 GO:0000166,GO:0003674,GO:0003824,GO:0004812,GO:0004817,GO:0005488,GO:0005524,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006082,GO:0006139,GO:0006399,GO:0006412,GO:0006418,GO:0006423,GO:0006518,GO:0006520,GO:0006725,GO:0006807,GO:0008144,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0016070,GO:0016874,GO:0016875,GO:0017076,GO:0019538,GO:0019752,GO:0030554,GO:0032553,GO:0032555,GO:0032559,GO:0034641,GO:0034645,GO:0034660,GO:0035639,GO:0036094,GO:0043038,GO:0043039,GO:0043043,GO:0043167,GO:0043168,GO:0043170,GO:0043436,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044281,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0071704,GO:0090304,GO:0097159,GO:0097367,GO:0140098,GO:0140101,GO:1901265,GO:1901360,GO:1901363,GO:1901564,GO:1901566,GO:1901576 6.1.1.16 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002439 486.0
DYD1_k127_598675_3 Putative zinc-binding metallo-peptidase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004788 354.0
DYD1_k127_598675_5 Predicted membrane protein (DUF2306) - - - 0.000000000000000000000000000000001181 135.0
DYD1_k127_598675_6 - - - - 0.000002465 49.0
DYD1_k127_598675_7 metallopeptidase activity - - - 0.000007395 57.0
DYD1_k127_6033118_0 Carboxypeptidase regulatory-like domain - - - 1.815e-235 750.0
DYD1_k127_6033118_1 Methylenetetrahydrofolate reductase K00297 - 1.5.1.20 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006433 526.0
DYD1_k127_6033118_2 Secretory lipase - - - 0.00000000000000000000000000000000000000000000000000000002143 201.0
DYD1_k127_6033118_3 PD-(D/E)XK nuclease superfamily - - - 0.000000000000000000000000000000000000000000000000002323 184.0
DYD1_k127_6033118_4 Secretory lipase - - - 0.00000000000000000000000000000000000000000000002433 179.0
DYD1_k127_6033118_5 Methionine synthase K00548 - 2.1.1.13 0.0000000000000000000001932 96.0
DYD1_k127_6033118_6 Four repeated domains in the Fasciclin I family of proteins, present in many other contexts. K19519 - - 0.000000000000000001801 98.0
DYD1_k127_6048693_0 AsmA-like C-terminal region - - - 1.891e-237 761.0
DYD1_k127_6048693_1 Phosphoglucomutase phosphomannomutase alpha beta alpha domain I K01840 - 5.4.2.8 2.396e-204 644.0
DYD1_k127_6048693_2 PFAM aminotransferase class V K04487 - 2.8.1.7 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001504 516.0
DYD1_k127_6048693_3 PFAM MazG nucleotide pyrophosphohydrolase K02428 - 3.6.1.66 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004215 405.0
DYD1_k127_6048693_4 Histidine kinase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001323 350.0
DYD1_k127_6048693_5 Alpha/beta hydrolase family - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000003046 294.0
DYD1_k127_6048693_6 transcriptional regulator - - - 0.0000000000000000000000000000000000000000000000000000000008832 207.0
DYD1_k127_6048693_7 - - - - 0.00000000000000000000133 96.0
DYD1_k127_6048693_8 PFAM Acetyl-CoA hydrolase transferase - - - 0.000004886 48.0
DYD1_k127_6048693_9 TIR domain - - - 0.0006473 47.0
DYD1_k127_6164451_0 Glucosamine-6-phosphate isomerase K02564 - 3.5.99.6 8.288e-309 956.0
DYD1_k127_6164451_1 Cell wall formation. Adds enolpyruvyl to UDP-N- acetylglucosamine K00790 - 2.5.1.7 8.978e-219 687.0
DYD1_k127_6164451_2 PFAM UvrD REP helicase K03657 - 3.6.4.12 9.227e-201 631.0
DYD1_k127_6164451_3 COGs COG1331 Highly conserved protein containing a thioredoxin domain K06888 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005724 555.0
DYD1_k127_6164451_4 Endonuclease/Exonuclease/phosphatase family K01142 - 3.1.11.2 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005549 355.0
DYD1_k127_6164451_5 PFAM GSCFA family - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002462 336.0
DYD1_k127_6164451_6 Domain of unknown function (DUF4290) - - - 0.0000000000000000000000000000000000000000000000000000000000000000005046 235.0
DYD1_k127_6164510_0 Sulfatase maturase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002296 540.0
DYD1_k127_6164510_1 Psort location Cytoplasmic, score 8.96 - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003242 444.0
DYD1_k127_6164510_2 response regulator, receiver K02477 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001008 314.0
DYD1_k127_6164510_3 Histidine kinase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000001518 306.0
DYD1_k127_6164510_4 Histidine-specific methyltransferase, SAM-dependent - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000001876 280.0
DYD1_k127_6164510_5 membrane protein (DUF2154) - - - 0.000000000000000000000000000000000000000000000000000000000007209 216.0
DYD1_k127_6164510_6 - - - - 0.00000000000000000000000000000000000000000000000000000002588 202.0
DYD1_k127_6164510_7 Domain of unknown function (DUF4288) - - - 0.000000000000000000000000000002153 123.0
DYD1_k127_6164510_8 - - - - 0.0000000000000001471 81.0
DYD1_k127_616840_0 Mate efflux family protein K03327 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007769 574.0
DYD1_k127_616840_1 ATP-dependent carboxylate-amine ligase which exhibits weak glutamate--cysteine ligase activity K06048 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001687 561.0
DYD1_k127_616840_2 Glutathione synthase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005243 486.0
DYD1_k127_616840_3 Evidence 4 Homologs of previously reported genes of - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002933 418.0
DYD1_k127_616840_4 Putative esterase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001511 338.0
DYD1_k127_616840_5 Glutamine amidotransferase class-I - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006778 318.0
DYD1_k127_616840_6 Putative esterase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000004015 267.0
DYD1_k127_616840_7 - - - - 0.000000000000000000000000000000000000000000002053 170.0
DYD1_k127_618299_0 The central subunit of the protein translocation channel SecYEG. Consists of two halves formed by TMs 1-5 and 6-10. These two domains form a lateral gate at the front which open onto the bilayer between TMs 2 and 7, and are clamped together by SecE at the back. The channel is closed by both a pore ring composed of hydrophobic SecY resides and a short helix (helix 2A) on the extracellular side of the membrane which forms a plug. The plug probably moves laterally to allow the channel to open. The ring and the pore may move independently K03076 - - 1.06e-225 704.0
DYD1_k127_618299_1 One of the primary rRNA binding proteins. Required for association of the 30S and 50S subunits to form the 70S ribosome, for tRNA binding and peptide bond formation. It has been suggested to have peptidyltransferase activity K02886 GO:0002181,GO:0003674,GO:0003676,GO:0003723,GO:0003735,GO:0005198,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0006412,GO:0006518,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0015934,GO:0019538,GO:0022625,GO:0022626,GO:0032991,GO:0034641,GO:0034645,GO:0043043,GO:0043170,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:0071704,GO:0097159,GO:1901363,GO:1901564,GO:1901566,GO:1901576,GO:1990904 - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001076 436.0
DYD1_k127_618299_10 abc transporter (atp-binding protein) K02013 - 3.6.3.34 0.000000000000000000000000000000000000000000000000000000000000000001659 233.0
DYD1_k127_618299_11 Binds to 23S rRNA. Forms part of two intersubunit bridges in the 70S ribosome K02874 GO:0003674,GO:0003676,GO:0003723,GO:0003735,GO:0005198,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0015934,GO:0019843,GO:0022625,GO:0022626,GO:0032991,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:0070180,GO:0097159,GO:1901363,GO:1990904 - 0.00000000000000000000000000000000000000000000000000000000000001026 216.0
DYD1_k127_618299_12 One of the primary rRNA binding proteins, it binds directly to 16S rRNA central domain where it helps coordinate assembly of the platform of the 30S subunit K02994 GO:0003674,GO:0003735,GO:0005198,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0015935,GO:0022626,GO:0022627,GO:0032991,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:1990904 - 0.0000000000000000000000000000000000000000000000000000000000002573 213.0
DYD1_k127_618299_13 Binds to the 23S rRNA K02876 GO:0003674,GO:0003735,GO:0005198,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0015934,GO:0022625,GO:0022626,GO:0032991,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:1990904 - 0.00000000000000000000000000000000000000000000000000000206 194.0
DYD1_k127_618299_14 The globular domain of the protein is located near the polypeptide exit tunnel on the outside of the subunit, while an extended beta-hairpin is found that lines the wall of the exit tunnel in the center of the 70S ribosome K02890 GO:0003674,GO:0003735,GO:0005198,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0015934,GO:0022625,GO:0022626,GO:0032991,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:1990904 - 0.00000000000000000000000000000000000000000000002438 175.0
DYD1_k127_618299_15 One of the proteins that surrounds the polypeptide exit tunnel on the outside of the subunit K02895 GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0006412,GO:0006518,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0015934,GO:0019538,GO:0022625,GO:0022626,GO:0032991,GO:0034641,GO:0034645,GO:0043043,GO:0043170,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:0071704,GO:1901564,GO:1901566,GO:1901576,GO:1990904 - 0.0000000000000000000000000000000000000000000000459 171.0
DYD1_k127_618299_16 One of the early assembly proteins it binds 23S rRNA. One of the proteins that surrounds the polypeptide exit tunnel on the outside of the ribosome. Forms the main docking site for trigger factor binding to the ribosome K02892 - - 0.00000000000000000000000000000000000000001892 154.0
DYD1_k127_618299_17 This is one of the proteins that binds and probably mediates the attachment of the 5S RNA into the large ribosomal subunit, where it forms part of the central protuberance K02881 GO:0003674,GO:0003676,GO:0003723,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0008097,GO:0015934,GO:0019843,GO:0022625,GO:0022626,GO:0032991,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:0097159,GO:1901363,GO:1990904 - 0.00000000000000000000000000000000000000004859 154.0
DYD1_k127_618299_18 Protein S19 forms a complex with S13 that binds strongly to the 16S ribosomal RNA K02965 GO:0000028,GO:0003674,GO:0003735,GO:0005198,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0006996,GO:0008150,GO:0009987,GO:0015935,GO:0016043,GO:0022607,GO:0022613,GO:0022618,GO:0022626,GO:0022627,GO:0032991,GO:0034622,GO:0042254,GO:0042255,GO:0042274,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043933,GO:0044085,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:0065003,GO:0070925,GO:0071826,GO:0071840,GO:1990904 - 0.0000000000000000000000000000000000000007431 149.0
DYD1_k127_618299_19 Binds 16S rRNA, required for the assembly of 30S particles and may also be responsible for determining the conformation of the 16S rRNA at the A site K02954 GO:0003674,GO:0003735,GO:0005198,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005840,GO:0006412,GO:0006518,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0015935,GO:0019538,GO:0032991,GO:0034641,GO:0034645,GO:0043043,GO:0043170,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044446,GO:0044464,GO:0071704,GO:1901564,GO:1901566,GO:1901576,GO:1990904 - 0.00000000000000000000000000000000000001773 145.0
DYD1_k127_618299_2 Binds the lower part of the 30S subunit head. Binds mRNA in the 70S ribosome, positioning it for translation K02982 GO:0002181,GO:0003674,GO:0003735,GO:0005198,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0006412,GO:0006518,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0015935,GO:0019538,GO:0022626,GO:0022627,GO:0032991,GO:0034641,GO:0034645,GO:0043043,GO:0043170,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:0071704,GO:1901564,GO:1901566,GO:1901576,GO:1990904 - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003984 401.0
DYD1_k127_618299_20 One of the primary rRNA binding proteins, it binds specifically to the 5'-end of 16S ribosomal RNA K02961 GO:0003674,GO:0003735,GO:0005198,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0006412,GO:0006518,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0015935,GO:0019538,GO:0022626,GO:0022627,GO:0032991,GO:0034641,GO:0034645,GO:0043043,GO:0043170,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:0071704,GO:1901564,GO:1901566,GO:1901576,GO:1990904 - 0.000000000000000000000000000000000007806 137.0
DYD1_k127_618299_21 TIGRFAM methionine aminopeptidase, type I K01265 - 3.4.11.18 0.00000000000000000000004816 98.0
DYD1_k127_618299_22 Belongs to the universal ribosomal protein uL29 family K02904 GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0015934,GO:0022625,GO:0022626,GO:0032991,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:1990904 - 0.0000000000000000001782 89.0
DYD1_k127_618299_23 Ribosomal protein L30 K02907 GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0015934,GO:0022625,GO:0022626,GO:0032991,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:1990904 - 0.00000000000000000231 85.0
DYD1_k127_618299_3 One of the primary rRNA binding proteins, it binds directly near the 3'-end of the 23S rRNA, where it nucleates assembly of the 50S subunit K02906 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007505 331.0
DYD1_k127_618299_4 Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily K02015 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009149 335.0
DYD1_k127_618299_5 This is 1 of the proteins that binds and probably mediates the attachment of the 5S RNA into the large ribosomal subunit, where it forms part of the central protuberance. In the 70S ribosome it contacts protein S13 of the 30S subunit (bridge B1b), connecting the 2 subunits K02931 GO:0000027,GO:0003674,GO:0003676,GO:0003723,GO:0003735,GO:0005198,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0006412,GO:0006518,GO:0006807,GO:0006996,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0015934,GO:0016043,GO:0019538,GO:0022607,GO:0022613,GO:0022618,GO:0022625,GO:0022626,GO:0032991,GO:0034622,GO:0034641,GO:0034645,GO:0042254,GO:0042255,GO:0042273,GO:0043043,GO:0043170,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043603,GO:0043604,GO:0043933,GO:0044085,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:0065003,GO:0070925,GO:0071704,GO:0071826,GO:0071840,GO:0097159,GO:1901363,GO:1901564,GO:1901566,GO:1901576,GO:1990904 - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006172 316.0
DYD1_k127_618299_6 Located at the back of the 30S subunit body where it stabilizes the conformation of the head with respect to the body K02988 GO:0003674,GO:0003735,GO:0005198,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0006412,GO:0006518,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0015935,GO:0019538,GO:0022626,GO:0022627,GO:0032991,GO:0034641,GO:0034645,GO:0043043,GO:0043170,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:0071704,GO:1901564,GO:1901566,GO:1901576,GO:1990904 - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004751 306.0
DYD1_k127_618299_7 Forms part of the polypeptide exit tunnel K02926 GO:0003674,GO:0003676,GO:0003723,GO:0003735,GO:0005198,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0006412,GO:0006518,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0019538,GO:0022626,GO:0032991,GO:0034641,GO:0034645,GO:0043043,GO:0043170,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044424,GO:0044444,GO:0044445,GO:0044464,GO:0071704,GO:0097159,GO:1901363,GO:1901564,GO:1901566,GO:1901576,GO:1990904 - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006259 308.0
DYD1_k127_618299_8 This protein binds to the 23S rRNA, and is important in its secondary structure. It is located near the subunit interface in the base of the L7 L12 stalk, and near the tRNA binding site of the peptidyltransferase center K02933 GO:0002181,GO:0003674,GO:0003676,GO:0003723,GO:0003735,GO:0005198,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0006412,GO:0006518,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0015934,GO:0019538,GO:0022625,GO:0022626,GO:0032991,GO:0034641,GO:0034645,GO:0043043,GO:0043170,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:0071704,GO:0097159,GO:1901363,GO:1901564,GO:1901566,GO:1901576,GO:1990904 - 0.0000000000000000000000000000000000000000000000000000000000000000000000000001461 260.0
DYD1_k127_618299_9 Binds 23S rRNA and is also seen to make contacts with the A and possibly P site tRNAs K02878 GO:0003674,GO:0003676,GO:0003723,GO:0003735,GO:0005198,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0015934,GO:0019843,GO:0022625,GO:0022626,GO:0032991,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:0097159,GO:1901363,GO:1990904 - 0.00000000000000000000000000000000000000000000000000000000000000000000001249 243.0
DYD1_k127_6191557_0 Pkd domain containing protein - - - 3.548e-198 641.0
DYD1_k127_6191557_1 PFAM Aminotransferase class I and II K00812 - 2.6.1.1 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003666 597.0
DYD1_k127_6191557_10 - - - - 0.000000000000000000000000000000000000000000000000000000002236 212.0
DYD1_k127_6191557_11 - - - - 0.00000000000000000000000000000000000005056 154.0
DYD1_k127_6191557_2 pfkB family carbohydrate kinase K03272 - 2.7.1.167,2.7.7.70 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002204 439.0
DYD1_k127_6191557_3 CarboxypepD_reg-like domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001574 420.0
DYD1_k127_6191557_4 Histidine kinase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004195 394.0
DYD1_k127_6191557_5 Response regulator of the LytR AlgR family K02477 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002505 378.0
DYD1_k127_6191557_6 Beta-lactamase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002562 382.0
DYD1_k127_6191557_7 PFAM Uncharacterised protein family UPF0271, LamB YcsF K07160 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000001363 277.0
DYD1_k127_6191557_8 Allophanate hydrolase subunit 2 K06350 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000008312 263.0
DYD1_k127_6191557_9 Allophanate hydrolase subunit 1 K06351 - - 0.0000000000000000000000000000000000000000000000000000000000000000000001643 246.0
DYD1_k127_6197256_0 ABC-2 type transporter K01992 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002533 521.0
DYD1_k127_6197256_1 transport, permease protein K01992 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001266 501.0
DYD1_k127_6197256_10 Myo-inositol-1-phosphate synthase K01858 - 5.5.1.4 0.000000000000000002198 85.0
DYD1_k127_6197256_2 PFAM Outer membrane efflux protein - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007894 424.0
DYD1_k127_6197256_3 ABC transporter K01990 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001862 414.0
DYD1_k127_6197256_4 COGs COG1131 ABC-type multidrug transport system ATPase component K01990 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001689 384.0
DYD1_k127_6197256_5 Biotin-lipoyl like K01993 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009552 323.0
DYD1_k127_6197256_6 PFAM Peptidase family M20 M25 M40 K01436 - - 0.000000000000000000000000000000000000000000000000000000000000000000000917 243.0
DYD1_k127_6197256_7 - - - - 0.00000000000000000000000000000000000000000000000000001573 200.0
DYD1_k127_6197256_8 Rieske [2Fe-2S] domain K05710 - - 0.000000000000000000000000002842 113.0
DYD1_k127_6197256_9 PFAM Bacterial regulatory proteins, tetR family - - - 0.0000000000000000006318 90.0
DYD1_k127_6198608_0 AP endonuclease - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004756 576.0
DYD1_k127_6198608_1 Oxidoreductase family, NAD-binding Rossmann fold - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003233 530.0
DYD1_k127_6198608_2 Hydroxypyruvate isomerase K01816 - 5.3.1.22 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001396 347.0
DYD1_k127_6198608_3 PA14 K08738 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000007922 297.0
DYD1_k127_6198608_4 Xylose isomerase domain protein TIM barrel - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000848 264.0
DYD1_k127_6198608_5 Gluconate 2-dehydrogenase subunit 3 - - - 0.000000000000000000000000000000000000000001623 162.0
DYD1_k127_6198608_6 GMC oxidoreductase - - - 0.0000000000000000000000000000000001338 132.0
DYD1_k127_6257923_0 Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family K15726 - - 6.071e-307 954.0
DYD1_k127_6257923_1 DNA-dependent ATPase involved in processing of recombination intermediates, plays a role in repairing DNA breaks. Stimulates the branch migration of RecA-mediated strand transfer reactions, allowing the 3' invading strand to extend heteroduplex DNA faster. Binds ssDNA in the presence of ADP but not other nucleotides, has ATPase activity that is stimulated by ssDNA and various branched DNA structures, but inhibited by SSB. Does not have RecA's homology-searching function K04485 - - 1.535e-194 615.0
DYD1_k127_6257923_2 SMART Elongator protein 3 MiaB NifB - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004009 505.0
DYD1_k127_6257923_3 1-aminocyclopropane-1-carboxylate deaminase K01505 - 3.5.99.7 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001144 327.0
DYD1_k127_6257923_4 protein conserved in bacteria (DUF2179) - - - 0.00000000000000000000000000000000000000000000000000000004027 202.0
DYD1_k127_6257923_5 - - - - 0.00000004287 59.0
DYD1_k127_6258804_0 cellulose binding - - - 0.0 1147.0
DYD1_k127_6258804_1 Bacterial protein of unknown function (DUF885) - - - 2.221e-244 769.0
DYD1_k127_6258804_11 TIGRFAM cytochrome oxidase maturation protein, cbb3-type - - - 0.000000000001075 70.0
DYD1_k127_6258804_2 ATPase, P-type (transporting), HAD superfamily, subfamily IC K01533,K17686 - 3.6.3.4,3.6.3.54 9.863e-222 712.0
DYD1_k127_6258804_3 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain K12972 - 1.1.1.79,1.1.1.81 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001392 342.0
DYD1_k127_6258804_4 Domain of Unknown Function (DUF1080) - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000001876 280.0
DYD1_k127_6258804_5 Belongs to the heme-copper respiratory oxidase family K15862 - 1.9.3.1 0.000000000000000000000000000000000000000000000000000000000000000000000000000003963 272.0
DYD1_k127_6258804_6 Alpha/beta hydrolase family K01563 - 3.8.1.5 0.000000000000000000000000000000000000000000000000000000000000000000000000001156 263.0
DYD1_k127_6258804_7 Universal stress protein - - - 0.00000000000000000000000000000000000000000000000000000000000000000000004177 249.0
DYD1_k127_6258804_8 - - - - 0.000000000000000000000000000000000000000000000000005373 201.0
DYD1_k127_6258804_9 Belongs to the MenA family. Type 1 subfamily K02548 - 2.5.1.74 0.000000000000000000000000000000000000002574 149.0
DYD1_k127_6262828_0 Carboxypeptidase regulatory-like domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003166 442.0
DYD1_k127_6262828_1 Sigma factor regulatory protein, FecR PupR family - - - 0.0000000000000000000000000000003285 130.0
DYD1_k127_6312875_0 domain protein K20276 - - 0.0 1063.0
DYD1_k127_6312875_1 PFAM Bacterial membrane protein YfhO - - - 1.549e-315 985.0
DYD1_k127_6312875_10 Putative zinc- or iron-chelating domain - - - 0.00000000000000000000000000000000000000000000000001456 185.0
DYD1_k127_6312875_11 Putative lumazine-binding - - - 0.0000000000000000000000000000000000000009615 153.0
DYD1_k127_6312875_12 Phosphoglycerate mutase family - - - 0.000000000000000000000000000000001836 135.0
DYD1_k127_6312875_13 OmpA family - - - 0.0000000000000000000000000000001232 128.0
DYD1_k127_6312875_14 chlorophyll binding - - - 0.0000000000000000008459 104.0
DYD1_k127_6312875_2 efflux transmembrane transporter activity K02004 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007964 581.0
DYD1_k127_6312875_3 ABC transporter - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006838 390.0
DYD1_k127_6312875_4 COGs COG2885 Outer membrane protein and related peptidoglycan-associated (lipo)protein - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002524 380.0
DYD1_k127_6312875_5 Metal dependent phosphohydrolases with conserved 'HD' motif. - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000002335 269.0
DYD1_k127_6312875_6 TIGRFAM Bacteroidetes-specific - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000002973 263.0
DYD1_k127_6312875_7 Protein of unknown function, DUF255 - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000001205 255.0
DYD1_k127_6312875_8 COGs COG2208 Serine phosphatase RsbU regulator of sigma subunit - - - 0.0000000000000000000000000000000000000000000000000000000001918 218.0
DYD1_k127_6312875_9 RibD C-terminal domain K00287 - 1.5.1.3 0.000000000000000000000000000000000000000000000000000703 188.0
DYD1_k127_632330_0 Releases the supercoiling and torsional tension of DNA, which is introduced during the DNA replication and transcription, by transiently cleaving and rejoining one strand of the DNA duplex. Introduces a single-strand break via transesterification at a target site in duplex DNA. The scissile phosphodiester is attacked by the catalytic tyrosine of the enzyme, resulting in the formation of a DNA-(5'-phosphotyrosyl)-enzyme intermediate and the expulsion of a 3'-OH DNA strand. The free DNA strand then undergoes passage around the unbroken strand, thus removing DNA supercoils. Finally, in the religation step, the DNA 3'-OH attacks the covalent intermediate to expel the active-site tyrosine and restore the DNA phosphodiester backbone K03168 - 5.99.1.2 0.0 1066.0
DYD1_k127_632330_1 Nicotinate-nucleotide adenylyltransferase - - - 2.823e-212 668.0
DYD1_k127_632330_2 Acyl-CoA synthetase (AMP-forming) AMP-acid ligase II K01897 - 6.2.1.3 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002623 558.0
DYD1_k127_632330_3 PFAM Sodium alanine symporter family K03310 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005699 548.0
DYD1_k127_632330_4 Belongs to the arginase family K01480 - 3.5.3.11 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007666 469.0
DYD1_k127_632330_5 PFAM Phosphoglycerate mutase K08296 - - 0.000000000000000000000000000000001431 135.0
DYD1_k127_6362074_0 The UvrABC repair system catalyzes the recognition and processing of DNA lesions. UvrA is an ATPase and a DNA-binding protein. A damage recognition complex composed of 2 UvrA and 2 UvrB subunits scans DNA for abnormalities. When the presence of a lesion has been verified by UvrB, the UvrA molecules dissociate K03701 - - 0.0 1212.0
DYD1_k127_6362074_1 Response regulator of the LytR AlgR family K02477 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001648 375.0
DYD1_k127_6362074_2 Histidine kinase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005124 346.0
DYD1_k127_6393261_0 PKD domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001159 523.0
DYD1_k127_6393261_1 Catalyzes the reversible reaction in which hydroxymethyl group from 5,10-methylenetetrahydrofolate is transferred onto alpha-ketoisovalerate to form ketopantoate K00606 - 2.1.2.11 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001317 464.0
DYD1_k127_6393261_2 Isocitrate dehydrogenase K00031 - 1.1.1.42 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001343 326.0
DYD1_k127_6393261_3 transcriptional regulator K03719,K05800 - - 0.0000000000000000000000000000000000000000000000000000000000000000000006424 239.0
DYD1_k127_6393261_4 Cysteine-rich secretory protein family - - - 0.00000000000000000000000000000000000000000000000000000000000000000003583 236.0
DYD1_k127_6393261_5 Glycosyl transferases group 1 - - - 0.000000000000000000000000000000000000000000000000000000000000000004918 238.0
DYD1_k127_6393261_6 Pyrimidine operon attenuation protein uracil phosphoribosyltransferase K02825 - 2.4.2.9 0.0000000000000000000000000000000000000000000000000002646 189.0
DYD1_k127_6397425_0 Aldehyde dehydrogenase family K00140,K22187 - 1.2.1.18,1.2.1.27 1.626e-229 719.0
DYD1_k127_6397425_1 Amidohydrolase family - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001838 492.0
DYD1_k127_6397425_2 Aminotransferase class-III K15372 - 2.6.1.55 0.000000000000000000000000000000000000000000005407 166.0
DYD1_k127_6397425_3 Sortilin, neurotensin receptor 3, - - - 0.0000001105 55.0
DYD1_k127_6397425_4 Bacteriocin-protection, YdeI or OmpD-Associated - - - 0.000002778 56.0
DYD1_k127_6406900_0 Leucine-rich repeat (LRR) protein K13730 - - 1.946e-198 644.0
DYD1_k127_6406900_1 - - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004973 336.0
DYD1_k127_6406900_2 - - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007571 316.0
DYD1_k127_6406900_3 - - - - 0.000000000000000000000000000000000000000008732 158.0
DYD1_k127_6433038_0 Transferrin receptor-like dimerisation domain K01301 - 3.4.17.21 2.703e-312 973.0
DYD1_k127_6433038_1 PFAM Transketolase, C-terminal domain K00615 - 2.2.1.1 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001224 530.0
DYD1_k127_6433038_2 imidazolonepropionase activity - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005179 377.0
DYD1_k127_6433038_3 PFAM Transketolase, thiamine diphosphate binding domain K00615 - 2.2.1.1 0.000000000000000000000000000000000000000000000009774 171.0
DYD1_k127_6433038_4 ArsR family transcriptional regulator - - - 0.000000000000000000000000006167 110.0
DYD1_k127_6433038_5 Endoribonuclease L-PSP - - - 0.00000000000000000000000001546 115.0
DYD1_k127_6440818_0 Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family K03296,K18138 - - 0.0 1336.0
DYD1_k127_6440818_1 ABC transporter transmembrane region K18889 - - 2.342e-253 790.0
DYD1_k127_6440818_2 Belongs to the Glu Leu Phe Val dehydrogenases family K00263 - 1.4.1.9 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001156 542.0
DYD1_k127_6440818_3 Involved in transcription antitermination. Required for transcription of ribosomal RNA (rRNA) genes. Binds specifically to the boxA antiterminator sequence of the ribosomal RNA (rrn) operons K03625 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001357 368.0
DYD1_k127_6440818_4 Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family K03585 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001262 338.0
DYD1_k127_6440818_5 Protein of unknown function (DUF1573) - - - 0.0000000000000000000000000000000000000000000000000000000000005962 214.0
DYD1_k127_6440818_6 YbbR-like protein - - - 0.000000000000000000000000000000000000000000000000000001055 204.0
DYD1_k127_6440818_7 Catalyzes the phosphorylation of the 3'-hydroxyl group of dephosphocoenzyme A to form coenzyme A K00859 GO:0003674,GO:0003824,GO:0004140,GO:0006139,GO:0006163,GO:0006164,GO:0006725,GO:0006732,GO:0006753,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009108,GO:0009117,GO:0009150,GO:0009152,GO:0009165,GO:0009259,GO:0009260,GO:0009987,GO:0015936,GO:0015937,GO:0016301,GO:0016310,GO:0016740,GO:0016772,GO:0016773,GO:0018130,GO:0019438,GO:0019637,GO:0019693,GO:0033865,GO:0033866,GO:0033875,GO:0034030,GO:0034032,GO:0034033,GO:0034641,GO:0034654,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0046390,GO:0046483,GO:0051186,GO:0051188,GO:0055086,GO:0071704,GO:0072521,GO:0072522,GO:0090407,GO:1901135,GO:1901137,GO:1901293,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576 2.7.1.24 0.0000000000000000000000000000000000000000000000000001115 192.0
DYD1_k127_6440818_8 TIGRFAM preprotein translocase, YajC subunit K03210 - - 0.000000000000000000000000000001501 123.0
DYD1_k127_6440818_9 YtxH-like protein - - - 0.000000000000000000000000000007955 121.0
DYD1_k127_6447939_0 Penicillin amidase K01434 - 3.5.1.11 3.785e-227 728.0
DYD1_k127_6447939_1 Metallopeptidase family M24 - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004588 604.0
DYD1_k127_6447939_10 Belongs to the ComB family K05979 - 3.1.3.71 0.0000000000000000000000000000000000000000000000000000000000000000000000000000001345 272.0
DYD1_k127_6447939_11 PFAM thioesterase superfamily - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000003475 265.0
DYD1_k127_6447939_12 Catalyzes hydrolysis of the D-alanyl-D-alanine dipeptide K08641 - 3.4.13.22 0.00000000000000000000000000000000000000000000000000000000000000000002079 239.0
DYD1_k127_6447939_13 Acetyltransferase (GNAT) domain - - - 0.000000000000000000000000000000000000000000000000000004591 194.0
DYD1_k127_6447939_14 PFAM MazG nucleotide pyrophosphohydrolase - - - 0.000000000000000000000000000000000000000000000001686 175.0
DYD1_k127_6447939_15 tail collar domain protein - - - 0.0000000000000000000000000000000002494 145.0
DYD1_k127_6447939_16 Allows the formation of correctly charged Asn-tRNA(Asn) or Gln-tRNA(Gln) through the transamidation of misacylated Asp- tRNA(Asn) or Glu-tRNA(Gln) in organisms which lack either or both of asparaginyl-tRNA or glutaminyl-tRNA synthetases. The reaction takes place in the presence of glutamine and ATP through an activated phospho-Asp-tRNA(Asn) or phospho-Glu-tRNA(Gln) K02435 - 6.3.5.6,6.3.5.7 0.0000000000000000000000000000006875 123.0
DYD1_k127_6447939_17 - - - - 0.0000000000000000000000000008109 119.0
DYD1_k127_6447939_18 Important for reducing fluoride concentration in the cell, thus reducing its toxicity K06199 GO:0003674,GO:0005215,GO:0005575,GO:0005623,GO:0005886,GO:0005887,GO:0006810,GO:0006811,GO:0006820,GO:0008150,GO:0008509,GO:0015075,GO:0015103,GO:0015318,GO:0015698,GO:0016020,GO:0016021,GO:0022857,GO:0031224,GO:0031226,GO:0034220,GO:0044425,GO:0044459,GO:0044464,GO:0051179,GO:0051234,GO:0055085,GO:0071944,GO:0098656,GO:0098660,GO:0098661,GO:1903424,GO:1903425 - 0.000000000000000000000004597 105.0
DYD1_k127_6447939_19 - - - - 0.000000000000000007963 83.0
DYD1_k127_6447939_2 Tetratricopeptide repeat - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001398 627.0
DYD1_k127_6447939_20 pfam nudix - - - 0.0000000000000003635 79.0
DYD1_k127_6447939_21 Part of the MsrPQ system that repairs oxidized periplasmic proteins containing methionine sulfoxide residues (Met-O), using respiratory chain electrons. Thus protects these proteins from oxidative-stress damage caused by reactive species of oxygen and chlorine generated by the host defense mechanisms. MsrPQ is essential for the maintenance of envelope integrity under bleach stress, rescuing a wide series of structurally unrelated periplasmic proteins from methionine oxidation. MsrQ provides electrons for reduction to the reductase catalytic subunit MsrP, using the quinone pool of the respiratory chain - - - 0.000000002539 65.0
DYD1_k127_6447939_22 - - - - 0.000000648 58.0
DYD1_k127_6447939_23 - - - - 0.000002125 55.0
DYD1_k127_6447939_3 The glycine cleavage system catalyzes the degradation of glycine K00605 - 2.1.2.10 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000866 580.0
DYD1_k127_6447939_4 efflux protein, MATE family K03327 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002538 488.0
DYD1_k127_6447939_5 TIGRFAM ribosomal RNA small subunit methyltransferase RsmB K03500 - 2.1.1.176 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001182 443.0
DYD1_k127_6447939_6 membrane protease - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000159 413.0
DYD1_k127_6447939_7 DegT/DnrJ/EryC1/StrS aminotransferase family - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003773 403.0
DYD1_k127_6447939_8 Phosphate acyltransferases K00655 - 2.3.1.51 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000002175 291.0
DYD1_k127_6447939_9 TIGRFAM 1-acyl-sn-glycerol-3-phosphate acyltransferases K00655 - 2.3.1.51 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000007473 284.0
DYD1_k127_6481912_0 amino acids such as valine, to avoid such errors it has two additional distinct tRNA(Ile)-dependent editing activities. One activity is designated as 'pretransfer' editing and involves the hydrolysis of activated Val-AMP. The other activity is designated 'posttransfer' editing and involves deacylation of mischarged Val-tRNA(Ile) K01870 GO:0003674,GO:0003824,GO:0004812,GO:0004822,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006082,GO:0006139,GO:0006399,GO:0006412,GO:0006418,GO:0006428,GO:0006518,GO:0006520,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0016070,GO:0016874,GO:0016875,GO:0019538,GO:0019752,GO:0034641,GO:0034645,GO:0034660,GO:0043038,GO:0043039,GO:0043043,GO:0043170,GO:0043436,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044281,GO:0044424,GO:0044464,GO:0046483,GO:0071704,GO:0090304,GO:0140098,GO:0140101,GO:1901360,GO:1901564,GO:1901566,GO:1901576 6.1.1.5 0.0 1511.0
DYD1_k127_6481912_1 COGs COG1033 exporter of the RND superfamily protein K07003 - - 2.512e-318 993.0
DYD1_k127_6481912_10 Catalyzes the anti-1,4-elimination of the C-3 phosphate and the C-6 proR hydrogen from 5-enolpyruvylshikimate-3-phosphate (EPSP) to yield chorismate, which is the branch point compound that serves as the starting substrate for the three terminal pathways of aromatic amino acid biosynthesis. This reaction introduces a second double bond into the aromatic ring system K01736 GO:0000166,GO:0003674,GO:0003824,GO:0004107,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006082,GO:0006520,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0008652,GO:0009058,GO:0009072,GO:0009073,GO:0009423,GO:0009987,GO:0010181,GO:0016053,GO:0016829,GO:0016835,GO:0016838,GO:0019438,GO:0019752,GO:0032553,GO:0036094,GO:0043167,GO:0043168,GO:0043436,GO:0043648,GO:0043650,GO:0044237,GO:0044238,GO:0044249,GO:0044281,GO:0044283,GO:0044424,GO:0044444,GO:0044464,GO:0046394,GO:0046417,GO:0048037,GO:0050662,GO:0071704,GO:0097159,GO:0097367,GO:1901265,GO:1901360,GO:1901362,GO:1901363,GO:1901564,GO:1901566,GO:1901576 4.2.3.5 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001557 549.0
DYD1_k127_6481912_11 Catalyzes the synthesis of 5,6-dihydrouridine (D), a modified base found in the D-loop of most tRNAs, via the reduction of the C5-C6 double bond in target uridines - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001596 542.0
DYD1_k127_6481912_12 fatty acid desaturase K00508 - 1.14.19.3 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002529 501.0
DYD1_k127_6481912_13 Catalyzes the conversion of epoxyqueuosine (oQ) to queuosine (Q), which is a hypermodified base found in the wobble positions of tRNA(Asp), tRNA(Asn), tRNA(His) and tRNA(Tyr) K18979 - 1.17.99.6 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007794 481.0
DYD1_k127_6481912_14 Belongs to the dicarboxylate amino acid cation symporter (DAACS) (TC 2.A.23) family - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009151 456.0
DYD1_k127_6481912_15 Flavin transferase that catalyzes the transfer of the FMN moiety of FAD and its covalent binding to the hydroxyl group of a threonine residue in a target flavoprotein K03734 - 2.7.1.180 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005792 392.0
DYD1_k127_6481912_16 Belongs to the CDS family K00981 - 2.7.7.41 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009052 372.0
DYD1_k127_6481912_17 SMART DNA mismatch repair protein MutS - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001043 382.0
DYD1_k127_6481912_18 Glycosyltransferase like family 2 K07011 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007724 353.0
DYD1_k127_6481912_19 PFAM EamA-like transporter family - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001825 316.0
DYD1_k127_6481912_2 Belongs to the class-II aminoacyl-tRNA synthetase family K01880 - 6.1.1.14 2.973e-272 843.0
DYD1_k127_6481912_20 PFAM Aminotransferase class I and II K00817 - 2.6.1.9 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000002325 304.0
DYD1_k127_6481912_21 Catalyzes the formation of phosphatidylethanolamine (PtdEtn) from phosphatidylserine (PtdSer) K01613 - 4.1.1.65 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000009941 294.0
DYD1_k127_6481912_22 Glycosyltransferase family 9 (heptosyltransferase) - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000001274 300.0
DYD1_k127_6481912_23 Glycosyl transferase, family 2 - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000001459 294.0
DYD1_k127_6481912_24 PFAM CAAX amino terminal protease family K07052 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000009504 287.0
DYD1_k127_6481912_25 ZIP Zinc transporter - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000001199 278.0
DYD1_k127_6481912_26 This protein specifically catalyzes the removal of signal peptides from prolipoproteins K03101 - 3.4.23.36 0.00000000000000000000000000000000000000000000000000000000000000000000000000000001268 274.0
DYD1_k127_6481912_27 nucleotidyltransferase activity - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000001026 278.0
DYD1_k127_6481912_28 PFAM Scaffold protein Nfu NifU N terminal - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000001591 257.0
DYD1_k127_6481912_29 GAF domain-containing protein K08968 - 1.8.4.14 0.00000000000000000000000000000000000000000000000000000000000000000000002761 243.0
DYD1_k127_6481912_3 Belongs to the Glu Leu Phe Val dehydrogenases family K00261 - 1.4.1.3 3.429e-242 751.0
DYD1_k127_6481912_30 transferase activity, transferring glycosyl groups - - - 0.00000000000000000000000000000000000000000000000000000000000000000000005192 253.0
DYD1_k127_6481912_31 - - - - 0.000000000000000000000000000000000000000000000000000000000000000000004859 249.0
DYD1_k127_6481912_32 Methyltransferase domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000003544 237.0
DYD1_k127_6481912_33 Glycosyltransferase like family 2 - - - 0.00000000000000000000000000000000000000000000000000000000000000002229 231.0
DYD1_k127_6481912_34 ABC transporter transmembrane region K06147 - - 0.000000000000000000000000000000000000000000000000000000000001073 231.0
DYD1_k127_6481912_35 O-antigen ligase like membrane protein - - - 0.00000000000000000000000000000000000000000000000000003351 204.0
DYD1_k127_6481912_36 Domain of unknown function (DU1801) - - - 0.00000000000000000000000000000000000000000000000000006633 190.0
DYD1_k127_6481912_37 Pfam Activator of Hsp90 ATPase - - - 0.00000000000000000000000000000000000000000000001343 174.0
DYD1_k127_6481912_38 Glucose-regulated metallo-peptidase M90 K09933 - - 0.00000000000000000000000000000000000001016 154.0
DYD1_k127_6481912_39 AMP-binding enzyme C-terminal domain K01895 - 6.2.1.1 0.000000000000000000000000000000009343 128.0
DYD1_k127_6481912_4 Oxygen tolerance - - - 4.604e-203 643.0
DYD1_k127_6481912_40 Protein of unknown function (DUF559) - - - 0.000000000000000000000000000002803 123.0
DYD1_k127_6481912_41 Glycosyl transferase, family 2 - - - 0.00000000000000000000000000007141 126.0
DYD1_k127_6481912_42 - - - - 0.0000000000000001978 81.0
DYD1_k127_6481912_43 PFAM glycosyl transferase group 1 K19002 - 2.4.1.337 0.00000000000009673 83.0
DYD1_k127_6481912_5 Fe-S oxidoreductase - - - 1.496e-201 638.0
DYD1_k127_6481912_6 Radical SAM - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000851 599.0
DYD1_k127_6481912_7 Belongs to the dicarboxylate amino acid cation symporter (DAACS) (TC 2.A.23) family K11102 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004416 598.0
DYD1_k127_6481912_8 The RuvA-RuvB complex in the presence of ATP renatures cruciform structure in supercoiled DNA with palindromic sequence, indicating that it may promote strand exchange reactions in homologous recombination. RuvAB is a helicase that mediates the Holliday junction migration by localized denaturation and reannealing K03551 - 3.6.4.12 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001079 578.0
DYD1_k127_6481912_9 Deoxyguanosinetriphosphate triphosphohydrolase-like protein K01129 - 3.1.5.1 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004718 559.0
DYD1_k127_6492003_0 COG2366 Protein related to penicillin acylase K01434 - 3.5.1.11 1.628e-296 929.0
DYD1_k127_6492003_1 Psort location Cytoplasmic, score 8.96 - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008457 561.0
DYD1_k127_6492003_2 Transmembrane secretion effector - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002351 394.0
DYD1_k127_6492003_3 Transcriptional regulator containing an amidase domain and an AraC-type DNA-binding HTH domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000001705 252.0
DYD1_k127_6492003_4 Methyltransferase domain - - - 0.000000000000000000000000000000008912 135.0
DYD1_k127_6492003_5 metal cluster binding - - - 0.0000000000000000000000000000001265 130.0
DYD1_k127_6492003_6 Protein of unknown function (DUF2892) - - - 0.0000000000000000001908 89.0
DYD1_k127_6569822_0 Involved in the gluconeogenesis. Catalyzes the conversion of oxaloacetate (OAA) to phosphoenolpyruvate (PEP) through direct phosphoryl transfer between the nucleoside triphosphate and OAA K01610 - 4.1.1.49 1.461e-282 876.0
DYD1_k127_6569822_1 Key enzyme in the regulation of glycerol uptake and metabolism. Catalyzes the phosphorylation of glycerol to yield sn- glycerol 3-phosphate K00864 - 2.7.1.30 1.781e-233 730.0
DYD1_k127_6569822_10 Prevents misfolding and promotes the refolding and proper assembly of unfolded polypeptides generated under stress conditions K04077 GO:0003674,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006457,GO:0006458,GO:0008150,GO:0009987,GO:0016465,GO:0032991,GO:0044183,GO:0044424,GO:0044444,GO:0044445,GO:0044464,GO:0051082,GO:0061077,GO:0101031,GO:1990220 - 0.00000000000000000000000000000000000000000001542 163.0
DYD1_k127_6569822_11 Cytochrome c K08738 - - 0.0000000000000000000000000004898 117.0
DYD1_k127_6569822_2 symporter activity K03307,K11928 - - 1.419e-217 685.0
DYD1_k127_6569822_3 oligopeptide transporter, OPT family - - - 3.767e-205 657.0
DYD1_k127_6569822_4 C-terminal domain of alpha-glycerophosphate oxidase K00111 - 1.1.5.3 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003491 616.0
DYD1_k127_6569822_5 Multidrug transporter K08994 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003905 412.0
DYD1_k127_6569822_6 Belongs to the MIP aquaporin (TC 1.A.8) family K02440 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003536 354.0
DYD1_k127_6569822_7 enterobactin catabolic process K07214 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000163 315.0
DYD1_k127_6569822_8 Tetratricopeptide repeat - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000022 293.0
DYD1_k127_6569822_9 peptide-methionine (S)-S-oxide reductase activity K07304 - 1.8.4.11 0.000000000000000000000000000000000000000000000000000000000000000000000000000000001648 275.0
DYD1_k127_6570509_0 Belongs to the peptidase S41A family K03797 - 3.4.21.102 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002339 544.0
DYD1_k127_6570509_1 TIGRFAM universal bacterial protein YeaZ K14742 - - 0.000000000000000000000000000000000000000000000000000000000000000000000003616 250.0
DYD1_k127_6570509_2 Protein of unknown function (DUF2480) - - - 0.0000000000000000000000000000000000000000000000000000000000000000001328 233.0
DYD1_k127_6570772_0 COGs COG0488 ATPase components of ABC transporter with duplicated ATPase domains K06158 - - 8.879e-306 942.0
DYD1_k127_6570772_1 peptidase M13 K07386 - - 1.673e-278 871.0
DYD1_k127_6570772_10 - - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000006648 274.0
DYD1_k127_6570772_11 Cupin domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000002627 259.0
DYD1_k127_6570772_12 Patatin-like phospholipase K07001 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000001699 255.0
DYD1_k127_6570772_13 Eukaryotic DNA topoisomerase I, catalytic core K03168 - 5.99.1.2 0.00000000000000000000000000000000000000000000000000000000000000000000004582 252.0
DYD1_k127_6570772_14 [2Fe-2S] binding domain K07302 - 1.3.99.16 0.00000000000000000000000000000000000000000000000000000000000000000002269 235.0
DYD1_k127_6570772_15 BNR Asp-box repeat - - - 0.000000000000000000000000000000000000000000000000000000000000001029 221.0
DYD1_k127_6570772_16 OsmC-like protein - - - 0.00000000000000000000000000000000000000000000000000000001586 201.0
DYD1_k127_6570772_17 Acetyltransferase (GNAT) domain - - - 0.000000000000000000000000000000000000000000000001537 177.0
DYD1_k127_6570772_18 - - - - 0.000000000000000000000000000000000000000000000001549 183.0
DYD1_k127_6570772_19 universal stress protein - - - 0.0000000000000000000000000000000000000000000005532 177.0
DYD1_k127_6570772_2 Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain K07303 - 1.3.99.16 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002023 608.0
DYD1_k127_6570772_20 - - - - 0.00000000000000000000000000000000000373 148.0
DYD1_k127_6570772_21 - - - - 0.0000000000000000000000000000000000933 141.0
DYD1_k127_6570772_22 Putative esterase - - - 0.00000000000000000000000000003564 127.0
DYD1_k127_6570772_23 - - - - 0.0000000000000000000000000003147 118.0
DYD1_k127_6570772_24 Interacts with outer membrane receptor proteins that carry out high-affinity binding and energy dependent uptake into the periplasmic space of specific substrates. It could act to transduce energy from the cytoplasmic membrane to specific energy- requiring processes in the outer membrane, resulting in the release into the periplasm of ligands bound by these outer membrane proteins K03832 - - 0.000000000000000000001968 101.0
DYD1_k127_6570772_25 Dodecin K09165 - - 0.00000000000000000001407 92.0
DYD1_k127_6570772_26 CAAX protease self-immunity - - - 0.00000000000000000003491 98.0
DYD1_k127_6570772_27 Protein of unknown function (DUF3592) - - - 0.000000000000000001634 94.0
DYD1_k127_6570772_28 LytTr DNA-binding domain - - - 0.00000004056 64.0
DYD1_k127_6570772_29 TIGRFAM Acidobacterial duplicated orphan permease - - - 0.0000000557 56.0
DYD1_k127_6570772_3 Beta-lactamase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001514 540.0
DYD1_k127_6570772_4 dienelactone hydrolase K01061 - 3.1.1.45 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007078 481.0
DYD1_k127_6570772_5 fatty acid desaturase K00508 - 1.14.19.3 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004835 415.0
DYD1_k127_6570772_6 Phospholipase D. Active site motifs. K06131 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001902 381.0
DYD1_k127_6570772_7 Zinc-binding dehydrogenase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004765 359.0
DYD1_k127_6570772_8 Integral membrane protein TerC family K05794 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003363 344.0
DYD1_k127_6570772_9 LexA-binding, inner membrane-associated putative hydrolase K07038 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002525 329.0
DYD1_k127_6594168_0 Sortilin, neurotensin receptor 3, - - - 0.0 1145.0
DYD1_k127_6594168_1 Peptidase, M28 - - - 7.824e-213 672.0
DYD1_k127_6594168_10 Participates in the translocation of lipoproteins from the inner membrane to the outer membrane. Only forms a complex with a lipoprotein if the residue after the N-terminal Cys is not an aspartate (The Asp acts as a targeting signal to indicate that the lipoprotein should stay in the inner membrane) - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004502 325.0
DYD1_k127_6594168_11 CorA-like Mg2+ transporter protein K03284 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000005258 293.0
DYD1_k127_6594168_12 CPA2 family - - - 0.0000000000000000000000000000000000000000000000000000000000000000000007216 259.0
DYD1_k127_6594168_13 - - - - 0.000000000000000000000000000000000000000000000000000000000000000000005653 239.0
DYD1_k127_6594168_14 Belongs to the SOS response-associated peptidase family - - - 0.0000000000000000000000000000000000000000000000000000000000000000006304 236.0
DYD1_k127_6594168_15 WD40-like Beta Propeller Repeat K03641 - - 0.0000000000000000000000000000000000000000000000000000000002781 214.0
DYD1_k127_6594168_16 PAS domain - - - 0.0000000000000000000000000000000000000000000000000000001554 196.0
DYD1_k127_6594168_17 3-hydroxyanthranilate 3,4-dioxygenase activity - - - 0.000000000000000000000000000000000000000000000000001422 186.0
DYD1_k127_6594168_19 Oxidoreductase required for the transfer of electrons from pyruvate to flavodoxin K03737 - 1.2.7.1 0.000000000000000000000000000000000000000000644 160.0
DYD1_k127_6594168_2 Gaf domain - - - 2.873e-205 664.0
DYD1_k127_6594168_20 Transcription factor zinc-finger K09981 - - 0.000000000000000000000000000000000000000008411 157.0
DYD1_k127_6594168_21 Transcriptional regulator PadR-like family - - - 0.00000000000000000000000000000003096 128.0
DYD1_k127_6594168_3 MacB-like periplasmic core domain K02004 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000563 568.0
DYD1_k127_6594168_4 Beta-lactamase K01286 - 3.4.16.4 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009592 477.0
DYD1_k127_6594168_5 Catalyzes the conversion of dihydroorotate to orotate K00226 - 1.3.98.1 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002139 421.0
DYD1_k127_6594168_6 LytTr DNA-binding domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006264 384.0
DYD1_k127_6594168_7 PFAM Endonuclease Exonuclease phosphatase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001841 354.0
DYD1_k127_6594168_8 Sodium:neurotransmitter symporter family - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001498 354.0
DYD1_k127_6594168_9 Beta-lactamase superfamily domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008195 332.0
DYD1_k127_6596437_0 Nucleoside H symporter - - - 9.528e-225 700.0
DYD1_k127_6596437_1 Major Facilitator Superfamily K16211 - - 9.799e-204 642.0
DYD1_k127_6596437_2 PFAM ROK family - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003276 404.0
DYD1_k127_6596437_3 pfkB family carbohydrate kinase K00856 - 2.7.1.20 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002498 374.0
DYD1_k127_6596437_4 Large extracellular alpha-helical protein - - - 0.0000000000000000000000000000000000006454 153.0
DYD1_k127_6724674_0 Belongs to the thiolase family K00626 - 2.3.1.9 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006636 536.0
DYD1_k127_6724674_1 PFAM SAICAR synthetase K01923 GO:0003674,GO:0003824,GO:0004639,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006139,GO:0006163,GO:0006164,GO:0006188,GO:0006189,GO:0006725,GO:0006753,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009117,GO:0009123,GO:0009124,GO:0009126,GO:0009127,GO:0009150,GO:0009152,GO:0009156,GO:0009161,GO:0009165,GO:0009167,GO:0009168,GO:0009259,GO:0009260,GO:0009987,GO:0016874,GO:0016879,GO:0016881,GO:0018130,GO:0019438,GO:0019637,GO:0019693,GO:0034641,GO:0034654,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0044424,GO:0044464,GO:0046040,GO:0046390,GO:0046483,GO:0055086,GO:0071704,GO:0072521,GO:0072522,GO:0090407,GO:1901135,GO:1901137,GO:1901293,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576 6.3.2.6 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004366 486.0
DYD1_k127_6724674_2 PFAM MORN repeat variant - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000005584 294.0
DYD1_k127_6724674_3 Zinc phosphodiesterase, which displays some tRNA 3'- processing endonuclease activity. Probably involved in tRNA maturation, by removing a 3'-trailer from precursor tRNA K00784 GO:0003674,GO:0003824,GO:0004518,GO:0004519,GO:0004521,GO:0004540,GO:0006139,GO:0006396,GO:0006399,GO:0006725,GO:0006807,GO:0008033,GO:0008150,GO:0008152,GO:0009987,GO:0010467,GO:0016070,GO:0016787,GO:0016788,GO:0016891,GO:0016893,GO:0031123,GO:0034414,GO:0034470,GO:0034641,GO:0034660,GO:0042779,GO:0042780,GO:0042781,GO:0043170,GO:0043628,GO:0044237,GO:0044238,GO:0046483,GO:0071704,GO:0090304,GO:0090305,GO:0090501,GO:0090502,GO:0140098,GO:1901360,GO:1905267 3.1.26.11 0.000000000000000000000000000000000000000000000000000000000000000000000000005791 258.0
DYD1_k127_6724674_4 Belongs to the anti-sigma-factor antagonist family - - - 0.0000000000000000000000000000000000000000000000000000000002145 205.0
DYD1_k127_6741649_0 Belongs to the class-II aminoacyl-tRNA synthetase family K04567 - 6.1.1.6 1.712e-312 963.0
DYD1_k127_6741649_1 Organic solvent tolerance protein OstA - - - 2.774e-311 982.0
DYD1_k127_6741649_10 Catalyzes the transfer of the enolpyruvyl moiety of phosphoenolpyruvate (PEP) to the 5-hydroxyl of shikimate-3- phosphate (S3P) to produce enolpyruvyl shikimate-3-phosphate and inorganic phosphate K00800 - 2.5.1.19 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000169 416.0
DYD1_k127_6741649_11 Transglutaminase-like superfamily - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002528 407.0
DYD1_k127_6741649_12 Catalyzes the conversion of 3-deoxy-D-arabino- heptulosonate 7-phosphate (DAHP) to dehydroquinate (DHQ) K01735 - 4.2.3.4 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002311 387.0
DYD1_k127_6741649_13 N-acetylmuramoyl-L-alanine amidase K01448 - 3.5.1.28 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007158 365.0
DYD1_k127_6741649_14 Mammalian cell entry related domain protein K02067 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002035 345.0
DYD1_k127_6741649_15 Ppx GppA phosphatase K01524 - 3.6.1.11,3.6.1.40 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005512 323.0
DYD1_k127_6741649_16 SnoaL-like domain - - - 0.000000000000000000000000000000000000000000000007397 174.0
DYD1_k127_6741649_17 Septum formation initiator - - - 0.0000000000000000000000000001425 117.0
DYD1_k127_6741649_18 AhpC/TSA family - - - 0.0000000000000000000000001097 109.0
DYD1_k127_6741649_19 long-chain fatty acid transport protein - - - 0.0000000000000000000001508 104.0
DYD1_k127_6741649_2 Acetyl-CoA carboxylase carboxyltransferase component (subunits alpha and beta) - - - 2.497e-310 955.0
DYD1_k127_6741649_20 RNA pseudouridylate synthase K06177,K06180 - 5.4.99.23,5.4.99.28,5.4.99.29 0.000000007456 57.0
DYD1_k127_6741649_3 Acetyl-CoA carboxylase carboxyltransferase component (subunits alpha and beta) K01966 - 2.1.3.15,6.4.1.3 8.198e-289 891.0
DYD1_k127_6741649_4 PFAM M42 glutamyl aminopeptidase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004072 569.0
DYD1_k127_6741649_5 Belongs to the LDH2 MDH2 oxidoreductase family - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005481 548.0
DYD1_k127_6741649_6 PFAM Proline dehydrogenase K00318 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003311 527.0
DYD1_k127_6741649_7 Amidohydrolase family - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002469 485.0
DYD1_k127_6741649_8 chorismate mutase K04516 - 5.4.99.5 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001851 455.0
DYD1_k127_6741649_9 N-terminal domain of unknown function (DUF4140) - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007199 462.0
DYD1_k127_6771938_0 TIGRFAM cell shape determining protein, MreB Mrl family K03569 - - 1.6e-200 627.0
DYD1_k127_6771938_1 Bifunctional purine biosynthesis protein PurH K00602 - 2.1.2.3,3.5.4.10 0.0000000000000000000000000000000000000000000000001854 177.0
DYD1_k127_6779828_0 PFAM Stage II sporulation protein E (SpoIIE) K07315 - 3.1.3.3 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003405 563.0
DYD1_k127_6779828_1 Belongs to the UDP-N-acetylglucosamine 2-epimerase family K01791 - 5.1.3.14 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002355 482.0
DYD1_k127_6779828_10 3-demethylubiquinone-9 3-O-methyltransferase activity - - - 0.000000000000000000000000000000000000000000000000000000000000000000008919 237.0
DYD1_k127_6779828_2 TIGRFAM L-asparaginases, type I K01424 - 3.5.1.1 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002697 445.0
DYD1_k127_6779828_3 Glycosyl transferases group 1 - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009792 437.0
DYD1_k127_6779828_4 TIGRFAM hydrolase, TatD family K03424 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001495 371.0
DYD1_k127_6779828_5 Polysaccharide biosynthesis protein - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009599 317.0
DYD1_k127_6779828_6 Nuclease that resolves Holliday junction intermediates in genetic recombination. Cleaves the cruciform structure in supercoiled DNA by nicking to strands with the same polarity at sites symmetrically opposed at the junction in the homologous arms and leaves a 5'-terminal phosphate and a 3'-terminal hydroxyl group K01159 - 3.1.22.4 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000001266 280.0
DYD1_k127_6779828_7 Glycosyltransferase family 28 C-terminal domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000006836 267.0
DYD1_k127_6779828_8 PFAM Glycosyl transferase family 2 - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000001864 261.0
DYD1_k127_6779828_9 PFAM Polysaccharide deacetylase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000003928 243.0
DYD1_k127_6787268_0 Sodium:sulfate symporter transmembrane region - - - 1.111e-212 676.0
DYD1_k127_6787268_1 PFAM von Willebrand factor type A K07114 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003162 411.0
DYD1_k127_6787268_2 UPF0365 protein - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007804 391.0
DYD1_k127_6787268_3 Belongs to the DEAD box helicase family K11927 - 3.6.4.13 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001567 396.0
DYD1_k127_6787268_4 PFAM Protein kinase domain - - - 0.000000000000000000000000000000000000000000000000000000006733 208.0
DYD1_k127_6787268_5 Cold-shock protein K03704 - - 0.0000000000000000000000000000002867 123.0
DYD1_k127_6797592_0 A type II topoisomerase that negatively supercoils closed circular double-stranded (ds) DNA in an ATP-dependent manner to modulate DNA topology and maintain chromosomes in an underwound state. Negative supercoiling favors strand separation, and DNA replication, transcription, recombination and repair, all of which involve strand separation. Also able to catalyze the interconversion of other topological isomers of dsDNA rings, including catenanes and knotted rings. Type II topoisomerases break and join 2 DNA strands simultaneously in an ATP-dependent manner K02469 - 5.99.1.3 0.0 1302.0
DYD1_k127_6797592_1 Peptidase S10 - - - 2.817e-236 740.0
DYD1_k127_6797592_10 - - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000395 287.0
DYD1_k127_6797592_11 Catalyzes the formation of N(7)-methylguanine at position 46 (m7G46) in tRNA K03439 GO:0001510,GO:0003674,GO:0003824,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006139,GO:0006396,GO:0006399,GO:0006400,GO:0006725,GO:0006807,GO:0008033,GO:0008150,GO:0008152,GO:0008168,GO:0008173,GO:0008175,GO:0008176,GO:0008757,GO:0009451,GO:0009987,GO:0010467,GO:0016070,GO:0016423,GO:0016740,GO:0016741,GO:0030488,GO:0032259,GO:0032991,GO:0034470,GO:0034641,GO:0034660,GO:0034708,GO:0036265,GO:0043170,GO:0043412,GO:0043414,GO:0043527,GO:0044237,GO:0044238,GO:0044260,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0071704,GO:0090304,GO:0106004,GO:0140098,GO:0140101,GO:1901360,GO:1902494,GO:1990234 2.1.1.33 0.0000000000000000000000000000000000000000000000000000000000000000000000000000001407 271.0
DYD1_k127_6797592_12 Peptidoglycan-synthase activator LpoB K07337 - - 0.000000000000000000000000000000000000000000000000000000000000000000000004609 247.0
DYD1_k127_6797592_13 oxidoreductase activity, acting on CH-OH group of donors - - - 0.000000000000000000000000000000000000000000000000000000000008296 214.0
DYD1_k127_6797592_14 Universal stress protein - - - 0.0000000000000000000000000000000000000000000000000000000002749 212.0
DYD1_k127_6797592_15 PFAM N-(5'phosphoribosyl)anthranilate (PRA) isomerase K01817 - 5.3.1.24 0.00000000000000000000009138 106.0
DYD1_k127_6797592_16 - - - - 0.0000000000000000002335 97.0
DYD1_k127_6797592_17 Tetratricopeptide repeat - - - 0.0000000000000002837 91.0
DYD1_k127_6797592_2 Phosphotransferase enzyme family - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004335 602.0
DYD1_k127_6797592_3 Transporter K03281 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001965 561.0
DYD1_k127_6797592_4 beta-1,4-mannooligosaccharide phosphorylase K21065 - 3.2.1.197 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003918 529.0
DYD1_k127_6797592_5 protein conserved in bacteria K09859 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003558 514.0
DYD1_k127_6797592_6 Belongs to the folylpolyglutamate synthase family K11754 - 6.3.2.12,6.3.2.17 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001335 472.0
DYD1_k127_6797592_7 Carbon-nitrogen hydrolase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001904 379.0
DYD1_k127_6797592_8 Peptidase S8 and S53 subtilisin kexin sedolisin - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001109 374.0
DYD1_k127_6797592_9 Belongs to the ribulose-phosphate 3-epimerase family K01783 - 5.1.3.1 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000209 342.0
DYD1_k127_6878447_0 Phosphoenolpyruvate phosphomutase K01841 - 5.4.2.9 3.224e-245 766.0
DYD1_k127_6878447_1 Belongs to the class-V pyridoxal-phosphate-dependent aminotransferase family. PhnW subfamily K00830,K03430 - 2.6.1.37,2.6.1.44,2.6.1.45,2.6.1.51 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002505 379.0
DYD1_k127_6878447_2 C-terminal domain of CHU protein family - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000005796 267.0
DYD1_k127_6878447_3 Belongs to the CDP-alcohol phosphatidyltransferase class-I family - - - 0.0000000000000000000000000000000000006195 152.0
DYD1_k127_6878447_4 rhodanese-related sulfurtransferase - - - 0.00000000000000000000001505 105.0
DYD1_k127_6878447_5 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain K09459 - 4.1.1.82 0.00007796 47.0
DYD1_k127_692188_0 CarboxypepD_reg-like domain - - - 8.252e-294 926.0
DYD1_k127_692188_1 Synthesizes selenophosphate from selenide and ATP K01008 - 2.7.9.3 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002539 468.0
DYD1_k127_692188_2 Glycosyl transferase, family 2 - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000108 405.0
DYD1_k127_692188_3 Belongs to the sigma-70 factor family. ECF subfamily K03088 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001313 342.0
DYD1_k127_692188_4 N-terminal domain of galactosyltransferase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000843 341.0
DYD1_k127_692188_5 Rhodanese Homology Domain K06917 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004062 328.0
DYD1_k127_692188_6 Essential for recycling GMP and indirectly, cGMP K00942 GO:0003674,GO:0003824,GO:0004385,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006139,GO:0006163,GO:0006725,GO:0006753,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009116,GO:0009117,GO:0009119,GO:0009123,GO:0009126,GO:0009132,GO:0009135,GO:0009150,GO:0009161,GO:0009165,GO:0009167,GO:0009179,GO:0009185,GO:0009259,GO:0009987,GO:0016301,GO:0016310,GO:0016740,GO:0016772,GO:0016776,GO:0018130,GO:0019205,GO:0019438,GO:0019637,GO:0019693,GO:0034641,GO:0034654,GO:0042278,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0044424,GO:0044444,GO:0044464,GO:0046037,GO:0046128,GO:0046483,GO:0046710,GO:0046940,GO:0050145,GO:0055086,GO:0071704,GO:0072521,GO:0090407,GO:1901068,GO:1901135,GO:1901293,GO:1901360,GO:1901362,GO:1901564,GO:1901576,GO:1901657 2.7.4.8 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000002762 286.0
DYD1_k127_692188_7 Catalyzes the reversible adenylation of nicotinate mononucleotide (NaMN) to nicotinic acid adenine dinucleotide (NaAD) K00969 - 2.7.7.18 0.0000000000000000000000000000000000000000000000000000000000000000000000000000005747 267.0
DYD1_k127_692188_8 Saccharopine dehydrogenase NADP binding domain - - - 0.000000000000000000000000000001557 124.0
DYD1_k127_692188_9 - - - - 0.0000000004727 63.0
DYD1_k127_693024_0 Peptidase S8 and S53 subtilisin kexin sedolisin - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008736 613.0
DYD1_k127_693024_1 Sulfatase-modifying factor enzyme 1 K13444 - 1.8.3.7 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008738 396.0
DYD1_k127_693024_10 Domain of unknown function DUF302 - - - 0.0000000000000000000000000000000000000005352 151.0
DYD1_k127_693024_11 DoxX K15977 - - 0.00000000000000000000000000000000000008605 147.0
DYD1_k127_693024_12 endonuclease containing a URI domain K07461 - - 0.0000000000000000000000004427 108.0
DYD1_k127_693024_13 HEAT repeats - - - 0.00000000000000000008656 98.0
DYD1_k127_693024_14 - - - - 0.000000000000000004497 89.0
DYD1_k127_693024_15 - - - - 0.00000001738 62.0
DYD1_k127_693024_16 resolvase domain - - - 0.0000005753 52.0
DYD1_k127_693024_2 AI-2E family transporter - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007116 325.0
DYD1_k127_693024_3 - - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000003121 271.0
DYD1_k127_693024_4 - - - - 0.0000000000000000000000000000000000000000000000000000000000000000000001151 246.0
DYD1_k127_693024_5 EamA-like transporter family - - - 0.000000000000000000000000000000000000000000000000000000000000000001301 237.0
DYD1_k127_693024_6 - - - - 0.000000000000000000000000000000000000000000000000000000000000002503 226.0
DYD1_k127_693024_7 TIGRFAM RNA polymerase sigma factor, sigma-70 family K03088 - - 0.0000000000000000000000000000000000000000000000000000001403 199.0
DYD1_k127_693024_8 TIGRFAM Transcriptional regulator, Rrf2 - - - 0.00000000000000000000000000000000000000000000000005987 181.0
DYD1_k127_693024_9 SET (Su(var)3-9, Enhancer-of-zeste, Trithorax) domain K07117 - - 0.0000000000000000000000000000000000000000000002876 173.0
DYD1_k127_6949819_0 Domain of Unknown Function (DUF349) - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003941 592.0
DYD1_k127_6949819_1 Thioredoxin reductase K00384 - 1.8.1.9 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007624 442.0
DYD1_k127_6949819_2 GlcNAc-PI de-N-acetylase K01463 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005209 328.0
DYD1_k127_6949819_3 Catalyzes the oxidation of either pyridoxine 5'- phosphate (PNP) or pyridoxamine 5'-phosphate (PMP) into pyridoxal 5'-phosphate (PLP) K00275 - 1.4.3.5 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000001825 281.0
DYD1_k127_6949819_4 Belongs to the UPF0301 (AlgH) family K07735 - - 0.000000000000000000000000000000000000000000000000000000000000000000000003216 248.0
DYD1_k127_6967451_0 C-terminal domain of CHU protein family - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000001032 302.0
DYD1_k127_6967451_1 Sh3 type 3 domain protein - - - 0.0000000000000000000000000000000000000000000000001182 185.0
DYD1_k127_6979954_0 TIGRFAM Acidobacterial duplicated orphan permease K02004 - - 9.944e-237 756.0
DYD1_k127_6979954_1 FtsX-like permease family K02004 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009406 617.0
DYD1_k127_6979954_2 FtsX-like permease family - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001125 522.0
DYD1_k127_6979954_3 domain protein K03455,K03499 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003741 472.0
DYD1_k127_6979954_4 Amino acid permease K03294 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009969 420.0
DYD1_k127_6980091_0 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster K00266 - 1.4.1.13,1.4.1.14 3.12e-219 689.0
DYD1_k127_6980091_1 NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient K03737 GO:0003674,GO:0003824,GO:0006950,GO:0006979,GO:0008150,GO:0008152,GO:0016491,GO:0016625,GO:0016903,GO:0043873,GO:0050896,GO:0055114 1.2.7.1 2.062e-197 623.0
DYD1_k127_6980091_2 Iron-sulfur cluster binding domain of dihydroorotate dehydrogenase B K00266,K00528,K02823 - 1.18.1.2,1.19.1.1,1.4.1.13,1.4.1.14 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001731 493.0
DYD1_k127_6980091_3 - - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004753 343.0
DYD1_k127_6980091_4 TIR domain - - - 0.0001122 49.0
DYD1_k127_6989714_0 Peptidase S9 prolyl oligopeptidase active site domain protein - - - 1.5e-288 900.0
DYD1_k127_6989714_1 Peptidase S9, prolyl oligopeptidase active site domain protein - - - 2.184e-218 699.0
DYD1_k127_6989714_2 Peptidase dimerisation domain K12941 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005059 567.0
DYD1_k127_6989714_3 PFAM Peptidase family M20 M25 M40 K01436 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001737 541.0
DYD1_k127_6989714_4 SAM-dependent methyltransferase K06969 - 2.1.1.191 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007629 449.0
DYD1_k127_6989714_6 Belongs to the adenylyl cyclase class-4 guanylyl cyclase family - - - 0.00000000003637 68.0
DYD1_k127_70427_0 Motility related/secretion protein - - - 0.0 1577.0
DYD1_k127_70427_1 Phosphate acetyl butaryl transferase K00027,K00029 - 1.1.1.38,1.1.1.40 0.0 1116.0
DYD1_k127_70427_2 PFAM Transglycosylase SLT domain K08307 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006871 455.0
DYD1_k127_70427_3 Domain of unknown function (DUF4837) - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002319 364.0
DYD1_k127_70427_4 The RuvA-RuvB complex in the presence of ATP renatures cruciform structure in supercoiled DNA with palindromic sequence, indicating that it may promote strand exchange reactions in homologous recombination. RuvAB is a helicase that mediates the Holliday junction migration by localized denaturation and reannealing. RuvA stimulates, in the presence of DNA, the weak ATPase activity of RuvB K03550 - 3.6.4.12 0.00000000000000000000000000000000000000000000000000000000000000000000107 241.0
DYD1_k127_705457_0 thus facilitating recognition of the initiation point. It is needed to translate mRNA with a short Shine-Dalgarno (SD) purine-rich sequence K02945 - - 5.984e-315 976.0
DYD1_k127_705457_1 Outer membrane efflux protein - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008995 440.0
DYD1_k127_716242_0 RNA polymerase that catalyzes the synthesis of short RNA molecules used as primers for DNA polymerase during DNA replication K02316 - - 4.389e-235 743.0
DYD1_k127_716242_1 Catalyzes the conversion of D-ribulose 5-phosphate to formate and 3,4-dihydroxy-2-butanone 4-phosphate K14652 - 3.5.4.25,4.1.99.12 3.523e-225 701.0
DYD1_k127_716242_2 Binds and transfers iron-sulfur (Fe-S) clusters to target apoproteins. Can hydrolyze ATP K03593 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001448 556.0
DYD1_k127_716242_3 Nucleotidase that shows phosphatase activity on nucleoside 5'-monophosphates K03787 - 3.1.3.5 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000225 445.0
DYD1_k127_716242_4 Involved in the restart of stalled replication forks. Recognizes and binds the arrested nascent DNA chain at stalled replication forks. It can open the DNA duplex, via its helicase activity, and promote assembly of the primosome and loading of the major replicative helicase DnaB onto DNA K04066 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007826 318.0
DYD1_k127_716242_5 - - - - 0.000000000000000000000000000000000000000000000003059 180.0
DYD1_k127_716242_6 NifU domain protein - - - 0.0000000000000000000000000007182 114.0
DYD1_k127_716242_7 PFAM Pregnancy-associated plasma protein-A - - - 0.00000000000000002122 86.0
DYD1_k127_719838_0 A type II topoisomerase that negatively supercoils closed circular double-stranded (ds) DNA in an ATP-dependent manner to modulate DNA topology and maintain chromosomes in an underwound state. Negative supercoiling favors strand separation, and DNA replication, transcription, recombination and repair, all of which involve strand separation. Also able to catalyze the interconversion of other topological isomers of dsDNA rings, including catenanes and knotted rings. Type II topoisomerases break and join 2 DNA strands simultaneously in an ATP-dependent manner K02470 - 5.99.1.3 0.0 1088.0
DYD1_k127_719838_1 B12 binding domain K00548 - 2.1.1.13 0.0 1085.0
DYD1_k127_719838_2 Catalyzes the reversible transfer of the terminal phosphate of ATP to form a long-chain polyphosphate (polyP) K00937 - 2.7.4.1 5.973e-308 958.0
DYD1_k127_719838_3 FAD dependent oxidoreductase K07137 - - 1.734e-225 709.0
DYD1_k127_719838_4 MORN repeat variant - - - 5.264e-225 712.0
DYD1_k127_719838_5 Homocysteine S-methyltransferase K00548 - 2.1.1.13 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001491 520.0
DYD1_k127_719838_6 Tryptophan 2,3-dioxygenase K00453 - 1.13.11.11 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002721 398.0
DYD1_k127_719838_7 TIGRFAM polyphosphate nucleotide phosphotransferase, PPK2 family - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001191 370.0
DYD1_k127_719838_8 PFAM Ppx GppA phosphatase K01524 - 3.6.1.11,3.6.1.40 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004767 340.0
DYD1_k127_719838_9 CoA binding domain K06929 - - 0.000000000000000000000000000000000000000000000000003724 183.0
DYD1_k127_731618_0 2-oxoglutarate dehydrogenase, E1 K00164 - 1.2.4.2 0.0 1394.0
DYD1_k127_731618_1 Heat shock 70 kDa protein K04043 - - 0.0 1050.0
DYD1_k127_731618_10 Belongs to the aspartokinase family K00928 - 2.7.2.4 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006226 518.0
DYD1_k127_731618_11 Na H antiporter NhaD and related arsenite - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002482 513.0
DYD1_k127_731618_12 Component of the acetyl coenzyme A carboxylase (ACC) complex. Biotin carboxylase (BC) catalyzes the carboxylation of biotin on its carrier protein (BCCP) and then the CO(2) group is transferred by the transcarboxylase to acetyl-CoA to form malonyl- CoA K01963 - 2.1.3.15,6.4.1.2 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004565 492.0
DYD1_k127_731618_13 Tetratricopeptide repeat protein - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008818 416.0
DYD1_k127_731618_14 Domain of unknown function (DUF4105) - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000364 413.0
DYD1_k127_731618_15 membrane - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001276 380.0
DYD1_k127_731618_16 Belongs to the RNA methyltransferase TrmD family K00554 GO:0001510,GO:0003674,GO:0003824,GO:0006139,GO:0006396,GO:0006399,GO:0006400,GO:0006725,GO:0006807,GO:0008033,GO:0008150,GO:0008152,GO:0008168,GO:0008173,GO:0008175,GO:0008757,GO:0009019,GO:0009451,GO:0009987,GO:0010467,GO:0016070,GO:0016423,GO:0016740,GO:0016741,GO:0016772,GO:0016779,GO:0030488,GO:0032259,GO:0034470,GO:0034641,GO:0034660,GO:0043170,GO:0043412,GO:0043414,GO:0044237,GO:0044238,GO:0044260,GO:0046483,GO:0050518,GO:0070567,GO:0071704,GO:0090304,GO:0140098,GO:0140101,GO:1901360 2.1.1.228 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003687 353.0
DYD1_k127_731618_17 Catalyzes the 2'-O-methylation of the ribose of cytidine 1402 (C1402) in 16S rRNA K07056 - 2.1.1.198 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002444 331.0
DYD1_k127_731618_18 Sodium/calcium exchanger protein K07301 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002373 325.0
DYD1_k127_731618_19 Catalyzes the specific phosphorylation of 1,6-anhydro-N- acetylmuramic acid (anhMurNAc) with the simultaneous cleavage of the 1,6-anhydro ring, generating MurNAc-6-P. Is required for the utilization of anhMurNAc either imported from the medium or derived from its own cell wall murein, and thus plays a role in cell wall recycling K09001 - 2.7.1.170 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004216 320.0
DYD1_k127_731618_2 Dihydrolipoyl dehydrogenase K00382 - 1.8.1.4 6.467e-250 776.0
DYD1_k127_731618_20 Inositol monophosphatase K01092 - 3.1.3.25 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000553 316.0
DYD1_k127_731618_21 carboxylic ester hydrolase activity - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000001203 279.0
DYD1_k127_731618_22 Catalyzes the phosphorylation of pantothenate (Pan), the first step in CoA biosynthesis K03525 - 2.7.1.33 0.000000000000000000000000000000000000000000000000000000000000000001072 235.0
DYD1_k127_731618_23 TIGRFAM chromate transporter, chromate ion transporter (CHR) family K07240 - - 0.00000000000000000000000000000000000000000000000000000000000000002424 237.0
DYD1_k127_731618_24 Caspase domain - - - 0.000000000000000000000000000000000000000000000000000000000000009629 231.0
DYD1_k127_731618_25 Belongs to the bacterial ribosomal protein bS16 family K02959 GO:0003674,GO:0003735,GO:0005198,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005840,GO:0006412,GO:0006518,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0015935,GO:0019538,GO:0032991,GO:0034641,GO:0034645,GO:0043043,GO:0043170,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044446,GO:0044464,GO:0071704,GO:1901564,GO:1901566,GO:1901576,GO:1990904 - 0.0000000000000000000000000000000000000000000000000000000000000212 222.0
DYD1_k127_731618_26 Arylsulfotransferase (ASST) - - - 0.00000000000000000000000000000000000000000000000000003935 196.0
DYD1_k127_731618_27 Lipopolysaccharide-assembly, LptC-related - - - 0.000000000000000000000000000000000000000000000000006658 186.0
DYD1_k127_731618_28 This protein is located at the 30S-50S ribosomal subunit interface and may play a role in the structure and function of the aminoacyl-tRNA binding site K02884 GO:0003674,GO:0003735,GO:0005198,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0015934,GO:0022625,GO:0022626,GO:0032991,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:1990904 - 0.0000000000000000000000000000000000000000000005179 169.0
DYD1_k127_731618_29 PFAM Pterin 4 alpha carbinolamine dehydratase K01724 - 4.2.1.96 0.00000000000000000000000000000004335 126.0
DYD1_k127_731618_3 peptidylprolyl isomerase K01802,K03770 - 5.2.1.8 1.793e-216 692.0
DYD1_k127_731618_30 An accessory protein needed during the final step in the assembly of 30S ribosomal subunit, possibly for assembly of the head region. Probably interacts with S19. Essential for efficient processing of 16S rRNA. May be needed both before and after RbfA during the maturation of 16S rRNA. It has affinity for free ribosomal 30S subunits but not for 70S ribosomes K02860 - - 0.00000000000000000000000000000009281 130.0
DYD1_k127_731618_31 Transfers the fatty acyl group on membrane lipoproteins K03820 - - 0.0000000000000000000000000001354 124.0
DYD1_k127_731618_32 Protein of unknown function (DUF493) - - - 0.000000000000000000000002859 104.0
DYD1_k127_731618_33 Domain of unknown function (DUF4382) - - - 0.000000000005645 76.0
DYD1_k127_731618_4 Citrate transporter - - - 2.595e-215 675.0
DYD1_k127_731618_5 Glu Leu Phe Val dehydrogenase K00261 - 1.4.1.3 4.059e-200 630.0
DYD1_k127_731618_6 The 2-oxoglutarate dehydrogenase complex catalyzes the overall conversion of 2-oxoglutarate to succinyl-CoA and CO(2) K00658 - 2.3.1.61 4.897e-199 632.0
DYD1_k127_731618_7 Aldolase K11645 - 4.1.2.13 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002882 574.0
DYD1_k127_731618_8 Radical SAM - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000167 542.0
DYD1_k127_731618_9 CBS domain K03699 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009994 533.0
DYD1_k127_734792_0 FtsX-like permease family - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004436 580.0
DYD1_k127_734792_1 - - - - 0.0000000000000000000000000000000000000000000000000001668 191.0
DYD1_k127_773434_0 His Kinase A (phosphoacceptor) domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000001737 296.0
DYD1_k127_773434_1 photoreceptor activity K02007,K12132 - 2.7.11.1 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000491 297.0
DYD1_k127_773434_10 - - - - 0.000000000000000000000001303 110.0
DYD1_k127_773434_11 - - - - 0.0000000000000006226 83.0
DYD1_k127_773434_2 Belongs to the adenylyl cyclase class-4 guanylyl cyclase family K01768 - 4.6.1.1 0.00000000000000000000000000000000000000000000000000000000000000000000006548 259.0
DYD1_k127_773434_3 CAAX protease self-immunity - - - 0.00000000000000000000000000000000000000000000000000000000000000004729 237.0
DYD1_k127_773434_4 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase - - - 0.000000000000000000000000000000000000000000000000000000000009204 231.0
DYD1_k127_773434_5 helix_turn_helix, Lux Regulon - - - 0.0000000000000000000000000000000000000000000000000003574 193.0
DYD1_k127_773434_6 response regulator, receiver K02485 - - 0.000000000000000000000000000000000000000000000001121 178.0
DYD1_k127_773434_7 cheY-homologous receiver domain - - - 0.00000000000000000000000000000000000000000000009621 173.0
DYD1_k127_773434_8 PFAM AMP-dependent synthetase and ligase K12429,K18660,K18661,K18662 GO:0003674,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005777,GO:0042579,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0044424,GO:0044444,GO:0044464,GO:0051087 - 0.0000000000000000000000000000000000005505 143.0
DYD1_k127_773434_9 histidine kinase, dimerisation and phosphoacceptor region K02486 - 2.7.13.3 0.00000000000000000000000000006795 134.0
DYD1_k127_799221_0 heavy metal translocating P-type ATPase K01533,K17686 - 3.6.3.4,3.6.3.54 0.0 1230.0
DYD1_k127_799221_1 Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family K07798,K15727 - - 1.516e-205 654.0
DYD1_k127_799221_2 exo-alpha-(2->6)-sialidase activity - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001404 439.0
DYD1_k127_799221_3 TIGRFAM Acidobacterial duplicated orphan permease K02004 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003007 430.0
DYD1_k127_799221_4 Protein of unknown function (DUF2911) - - - 0.0000000000000000000000000000000000000000000000000000001678 200.0
DYD1_k127_799221_5 Thioredoxin-like - - - 0.0000000000000000000000000000000000000002259 154.0
DYD1_k127_799221_6 PFAM Outer membrane efflux protein - - - 0.000000000000000000005453 95.0
DYD1_k127_799221_7 Protein of unknown function (DUF3347) - - - 0.0000001012 56.0
DYD1_k127_821146_0 PFAM D-aminoacylase, C-terminal region K06015 - 3.5.1.81 1.985e-202 644.0
DYD1_k127_821146_1 Esterase of the alpha-beta hydrolase superfamily - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007781 520.0
DYD1_k127_821146_2 23S rRNA-intervening sequence protein - - - 0.00000000000000000000000000000000000000000000000002008 181.0
DYD1_k127_821146_3 Domain of unknown function (DUF4918) - - - 0.00000000000005077 73.0
DYD1_k127_857339_0 Adenylyl- / guanylyl cyclase, catalytic domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009238 541.0
DYD1_k127_857339_1 Peptidase S9, prolyl oligopeptidase, catalytic domain K01354 - 3.4.21.83 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000003888 292.0
DYD1_k127_857339_2 cheY-homologous receiver domain - - - 0.00000000000000000000000006383 107.0
DYD1_k127_876086_0 Involved in cell wall formation. Catalyzes the final step in the synthesis of UDP-N-acetylmuramoyl-pentapeptide, the precursor of murein K01929 - 6.3.2.10 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001273 531.0
DYD1_k127_876086_1 Repeat domain in Vibrio, Colwellia, Bradyrhizobium and Shewanella - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009126 379.0
DYD1_k127_876086_2 photoreceptor activity - - - 0.000000000000000000000000000000000000000000000000000000000000007108 232.0
DYD1_k127_876086_3 TIGRFAM TIGR02453 family protein - - - 0.00000000000000000000000000000000000000000000000000000000000001086 223.0
DYD1_k127_876086_4 Belongs to the class-II aminoacyl-tRNA synthetase family K01880 - 6.1.1.14 0.000000000000000000002528 94.0
DYD1_k127_890036_0 PFAM Stage II sporulation protein E (SpoIIE) - - - 2.128e-249 787.0
DYD1_k127_890036_1 Catalyzes the conversion of inosine 5'-phosphate (IMP) to xanthosine 5'-phosphate (XMP), the first committed and rate- limiting step in the de novo synthesis of guanine nucleotides, and therefore plays an important role in the regulation of cell growth K00088 - 1.1.1.205 1.066e-240 751.0
DYD1_k127_890036_10 Belongs to the anti-sigma-factor antagonist family K04749 - - 0.000000000000000000000000000000000001886 141.0
DYD1_k127_890036_11 PFAM Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase K04757 - 2.7.11.1 0.00000000000000000000000000000000001638 139.0
DYD1_k127_890036_12 COG NOG23400 non supervised orthologous group - - - 0.00000000000000000000000000000000004148 145.0
DYD1_k127_890036_13 cell redox homeostasis - - - 0.00000000009894 69.0
DYD1_k127_890036_2 peptidyl-prolyl isomerase K03771 - 5.2.1.8 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003709 531.0
DYD1_k127_890036_3 peptidyl-prolyl isomerase K03771 - 5.2.1.8 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002873 526.0
DYD1_k127_890036_4 membrane transporter protein K07090 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000002349 298.0
DYD1_k127_890036_5 Bacterial regulatory proteins, tetR family - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000001844 259.0
DYD1_k127_890036_6 Lytic transglycosylase with a strong preference for naked glycan strands that lack stem peptides K03642 - - 0.0000000000000000000000000000000000000000000000000000000000000000000001716 245.0
DYD1_k127_890036_7 Belongs to the thioredoxin family K03671 - - 0.00000000000000000000000000000000000000001985 154.0
DYD1_k127_890036_8 PFAM ATPase associated with various cellular activities K03924 - - 0.000000000000000000000000000000000000002895 148.0
DYD1_k127_890036_9 PFAM ABC transporter - - - 0.0000000000000000000000000000000000006445 148.0
DYD1_k127_919759_0 Amidohydrolase family - - - 0.0 1564.0
DYD1_k127_919759_1 In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity K02335 - 2.7.7.7 0.0 1058.0
DYD1_k127_919759_10 Dienelactone hydrolase family K01061 - 3.1.1.45 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000001745 294.0
DYD1_k127_919759_11 Participates in chromosomal partition during cell division. May act via the formation of a condensin-like complex containing Smc and ScpA that pull DNA away from mid-cell into both cell halves K06024 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000253 288.0
DYD1_k127_919759_12 Zn_pept - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000007895 284.0
DYD1_k127_919759_13 - - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000001107 257.0
DYD1_k127_919759_14 PFAM LemA family K03744 - - 0.0000000000000000000000000000000000000000000000000000000000000000002024 235.0
DYD1_k127_919759_15 Psort location CytoplasmicMembrane, score 10.00 - - - 0.00000000000000000000000000000000000000000000000000000000000000001661 237.0
DYD1_k127_919759_16 His Kinase A (phosphoacceptor) domain - - - 0.000000000000000000000000000000000000000000000000000007017 206.0
DYD1_k127_919759_17 PFAM Prokaryotic dksA traR C4-type zinc finger - - - 0.000000000000000000000000000000000000000000000000002778 191.0
DYD1_k127_919759_18 - - - - 0.000000000000000000000000000000000000000000000105 176.0
DYD1_k127_919759_19 Protein of unknown function (DUF2490) - - - 0.000000000000000000000000000000000000000000002069 173.0
DYD1_k127_919759_2 FtsX-like permease family - - - 1.632e-299 938.0
DYD1_k127_919759_20 Domain in cystathionine beta-synthase and other proteins. - - - 0.000000000000000000000000000000000000000000002593 168.0
DYD1_k127_919759_21 Belongs to the sigma-70 factor family. ECF subfamily K03088 - - 0.00000000000000000000000000000000000000000009217 166.0
DYD1_k127_919759_22 PepSY-associated TM region K09939 - - 0.0000000000000000000000000000000000000000001485 164.0
DYD1_k127_919759_23 DinB family - - - 0.0000000000000000000000000000000000002308 146.0
DYD1_k127_919759_24 PFAM response regulator receiver - - - 0.00000000000000000000000000000442 127.0
DYD1_k127_919759_25 Bacterial regulatory helix-turn-helix protein, lysR family K02019 - - 0.0000000000000000000002352 100.0
DYD1_k127_919759_26 - - - - 0.00000000000000005967 87.0
DYD1_k127_919759_3 TonB dependent receptor K16087 - - 4.769e-219 701.0
DYD1_k127_919759_4 AMP-binding enzyme - - - 3.799e-197 628.0
DYD1_k127_919759_5 Lamin Tail Domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004271 622.0
DYD1_k127_919759_6 PhoD-like phosphatase, N-terminal domain K01113 - 3.1.3.1 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001746 590.0
DYD1_k127_919759_7 Catalyzes the NADPH-dependent formation of L-aspartate- semialdehyde (L-ASA) by the reductive dephosphorylation of L- aspartyl-4-phosphate K00133 - 1.2.1.11 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003244 507.0
DYD1_k127_919759_8 secondary active sulfate transmembrane transporter activity K03321 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003935 420.0
DYD1_k127_919759_9 Belongs to the pseudouridine synthase RsuA family K06178 - 5.4.99.22 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004264 318.0
DYD1_k127_925815_0 ATP-dependent serine protease that mediates the selective degradation of mutant and abnormal proteins as well as certain short-lived regulatory proteins. Required for cellular homeostasis and for survival from DNA damage and developmental changes induced by stress. Degrades polypeptides processively to yield small peptide fragments that are 5 to 10 amino acids long. Binds to DNA in a double-stranded, site-specific manner K01338 - 3.4.21.53 0.0 1228.0
DYD1_k127_925815_1 OmpA family - - - 9.036e-267 837.0
DYD1_k127_925815_2 this subunit has chaperone activity. The binding of ATP and its subsequent hydrolysis by HslU are essential for unfolding of protein substrates subsequently hydrolyzed by HslV. HslU recognizes the N-terminal part of its protein substrates and unfolds these before they are guided to HslV for hydrolysis K03667 - - 1.025e-213 672.0
DYD1_k127_925815_3 Catalyzes the NADP-dependent rearrangement and reduction of 1-deoxy-D-xylulose-5-phosphate (DXP) to 2-C-methyl-D-erythritol 4-phosphate (MEP) K00099 GO:0000166,GO:0003674,GO:0003824,GO:0005488,GO:0006081,GO:0006082,GO:0006090,GO:0006629,GO:0006644,GO:0006720,GO:0006721,GO:0006793,GO:0006796,GO:0008150,GO:0008152,GO:0008299,GO:0008610,GO:0008654,GO:0009058,GO:0009240,GO:0009987,GO:0016114,GO:0016491,GO:0016614,GO:0016616,GO:0019288,GO:0019637,GO:0019682,GO:0019752,GO:0030145,GO:0030604,GO:0032787,GO:0036094,GO:0043167,GO:0043168,GO:0043169,GO:0043436,GO:0044237,GO:0044238,GO:0044249,GO:0044255,GO:0044281,GO:0046490,GO:0046872,GO:0046914,GO:0048037,GO:0050661,GO:0050662,GO:0051483,GO:0051484,GO:0055114,GO:0070402,GO:0071704,GO:0090407,GO:0097159,GO:1901135,GO:1901265,GO:1901363,GO:1901576 1.1.1.267 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002865 602.0
DYD1_k127_925815_4 zinc metalloprotease K11749 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003011 523.0
DYD1_k127_925815_5 PFAM GH3 auxin-responsive promoter - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003466 436.0
DYD1_k127_925815_6 penicillin-binding protein - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000003591 293.0
DYD1_k127_925815_7 PFAM Phosphoglycerate mutase K08296 - - 0.0000000000000000000000000000000000000000000000000000000002079 209.0
DYD1_k127_925815_8 Domain of unknown function (DUF4421) - - - 0.00000000000000000000000000000000000000000000001593 184.0
DYD1_k127_925815_9 Bacterial lipid A biosynthesis acyltransferase K02517 - 2.3.1.241 0.000000000000000000000000001576 117.0
DYD1_k127_9301_0 hydrogen-translocating pyrophosphatase activity K15987 - 3.6.1.1 0.0 1057.0
DYD1_k127_9301_1 CHAT domain - - - 1.357e-234 754.0
DYD1_k127_9301_10 Sigma-70 region 2 - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000003354 294.0
DYD1_k127_9301_11 PFAM thioesterase superfamily - - - 0.0000000000000000000000000000000000000000000000000000000000000000000001545 243.0
DYD1_k127_9301_12 protein conserved in bacteria - - - 0.000000000000000000000000000000000000000000000000002442 185.0
DYD1_k127_9301_13 heat shock protein binding - - - 0.00000000000000000000000000000000000000000000005098 178.0
DYD1_k127_9301_2 Amidohydrolase K03392 - 4.1.1.45 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003745 573.0
DYD1_k127_9301_3 Belongs to the UPF0176 family K07146 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005844 525.0
DYD1_k127_9301_4 Threonine synthase K01733 - 4.2.3.1 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004139 520.0
DYD1_k127_9301_5 PFAM Peptidase family M23 - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006679 491.0
DYD1_k127_9301_6 Catalyzes the ATP-dependent phosphorylation of L- homoserine to L-homoserine phosphate K00872 - 2.7.1.39 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009162 349.0
DYD1_k127_9301_7 - - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001054 325.0
DYD1_k127_9301_8 Catalyzes the methyl esterification of L-isoaspartyl residues in peptides and proteins that result from spontaneous decomposition of normal L-aspartyl and L-asparaginyl residues. It plays a role in the repair and or degradation of damaged proteins K00573 - 2.1.1.77 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004828 316.0
DYD1_k127_9301_9 Probable molybdopterin binding domain K03831 - 2.7.7.75 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004864 304.0
DYD1_k127_946322_0 cellulose binding - - - 0.0 1448.0
DYD1_k127_946322_1 Proton-translocating NADH-quinone oxidoreductase, chain L K00341 - 1.6.5.3 1.029e-249 785.0
DYD1_k127_946322_10 AAA domain, putative AbiEii toxin, Type IV TA system K02003 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000003863 299.0
DYD1_k127_946322_11 Outer membrane lipoprotein-sorting protein - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000005079 294.0
DYD1_k127_946322_12 - - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000006425 293.0
DYD1_k127_946322_13 Metallo-beta-lactamase superfamily - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000001094 270.0
DYD1_k127_946322_14 COGs COG3279 Response regulator of the LytR AlgR family - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000001161 258.0
DYD1_k127_946322_15 - K13652 - - 0.00000000000000000000000000000000000000000000000000000000000000000000526 246.0
DYD1_k127_946322_17 Cold shock protein domain - - - 0.000000000000000000000000000000000000000000000000000000011 202.0
DYD1_k127_946322_18 glyoxalase - - - 0.00000000000000000000000000000000000000000000000000000005417 197.0
DYD1_k127_946322_19 Protein of unknown function (DUF1761) - - - 0.000000000000000000000000000000000000000009226 157.0
DYD1_k127_946322_2 proton-translocating NADH-quinone oxidoreductase, chain M K00342 - 1.6.5.3 1.528e-202 643.0
DYD1_k127_946322_20 - - - - 0.000000000000000000000000000000002147 131.0
DYD1_k127_946322_21 Acetyltransferase (GNAT) domain K09994 - - 0.000000000000000000000000000000007095 132.0
DYD1_k127_946322_23 transcriptional regulator - - - 0.000000000000000000000000000004425 128.0
DYD1_k127_946322_24 - - - - 0.000000000000000000000008235 107.0
DYD1_k127_946322_25 NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be a menaquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient K00340 - 1.6.5.3 0.000000000000000000000589 96.0
DYD1_k127_946322_26 Protein of unknown function (DUF4199) - - - 0.000000000000000002559 87.0
DYD1_k127_946322_27 - - - - 0.0000000000000005839 82.0
DYD1_k127_946322_29 Amidohydrolase family - - - 0.00000001896 67.0
DYD1_k127_946322_3 Catalyzes the oxidative decarboxylation of 6- phosphogluconate to ribulose 5-phosphate and CO(2), with concomitant reduction of NADP to NADPH K00033 - 1.1.1.343,1.1.1.44 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001682 619.0
DYD1_k127_946322_4 NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be a menaquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient K00343 - 1.6.5.3 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009509 528.0
DYD1_k127_946322_5 Aminotransferase class I and II - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002187 488.0
DYD1_k127_946322_6 GntP family permease K03299,K06156 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001012 480.0
DYD1_k127_946322_7 MacB-like periplasmic core domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001714 381.0
DYD1_k127_946322_8 Histidine kinase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001391 347.0
DYD1_k127_946322_9 MacB-like periplasmic core domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002127 326.0
DYD1_k127_954683_0 Catalyzes the GTP-dependent ribosomal translocation step during translation elongation. During this step, the ribosome changes from the pre-translocational (PRE) to the post- translocational (POST) state as the newly formed A-site-bound peptidyl-tRNA and P-site-bound deacylated tRNA move to the P and E sites, respectively. Catalyzes the coordinated movement of the two tRNA molecules, the mRNA and conformational changes in the ribosome K02355 - - 0.0 1022.0
DYD1_k127_954683_1 ABC-type transport system involved in lipoprotein release permease component K09808 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005446 458.0
DYD1_k127_954683_10 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD - - - 0.000000000000000000000000000000000000000000000000000000001234 207.0
DYD1_k127_954683_11 - - - - 0.00000000000000000000000000000000000000000000000000003737 194.0
DYD1_k127_954683_12 Sigma-70, region 4 K03088 - - 0.000000000000000000000000000000000000000000382 163.0
DYD1_k127_954683_13 - - - - 0.0000000000000000000000000002957 118.0
DYD1_k127_954683_14 - - - - 0.000000000007444 70.0
DYD1_k127_954683_2 PFAM Uncharacterised conserved protein UCP016719 - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000126 454.0
DYD1_k127_954683_3 Attaches a formyl group to the free amino group of methionyl-tRNA(fMet). The formyl group appears to play a dual role in the initiator identity of N-formylmethionyl-tRNA by promoting its recognition by IF2 and preventing the misappropriation of this tRNA by the elongation apparatus K00604 GO:0003674,GO:0003824,GO:0004479,GO:0006139,GO:0006396,GO:0006399,GO:0006400,GO:0006412,GO:0006413,GO:0006464,GO:0006518,GO:0006725,GO:0006807,GO:0008033,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009451,GO:0009987,GO:0010467,GO:0016070,GO:0016740,GO:0016741,GO:0016742,GO:0019538,GO:0019988,GO:0034470,GO:0034641,GO:0034645,GO:0034660,GO:0036211,GO:0043043,GO:0043170,GO:0043412,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0046483,GO:0071704,GO:0071951,GO:0090304,GO:0140098,GO:0140101,GO:1901360,GO:1901564,GO:1901566,GO:1901576 2.1.2.9 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000259 427.0
DYD1_k127_954683_4 Belongs to the short-chain dehydrogenases reductases (SDR) family - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001194 343.0
DYD1_k127_954683_5 Glycosyltransferase, group 2 family protein K00721 - 2.4.1.83 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004156 341.0
DYD1_k127_954683_6 DNA repair enzyme that has both DNA N-glycosylase activity and AP-lyase activity. The DNA N-glycosylase activity releases various damaged pyrimidines from DNA by cleaving the N- glycosidic bond, leaving an AP (apurinic apyrimidinic) site. The AP-lyase activity cleaves the phosphodiester bond 3' to the AP site by a beta-elimination, leaving a 3'-terminal unsaturated sugar and a product with a terminal 5'-phosphate K10773 - 4.2.99.18 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007958 314.0
DYD1_k127_954683_7 membrane transporter protein K07090 - - 0.00000000000000000000000000000000000000000000000000000000000000000000008763 247.0
DYD1_k127_954683_8 Key enzyme in folate metabolism. Catalyzes an essential reaction for de novo glycine and purine synthesis, and for DNA precursor synthesis K00287 - 1.5.1.3 0.0000000000000000000000000000000000000000000000000000000000001031 216.0
DYD1_k127_954683_9 D,D-heptose 1,7-bisphosphate phosphatase K03273 - 3.1.3.82,3.1.3.83 0.000000000000000000000000000000000000000000000000000000000001611 213.0