logo

Overview

ID MAG00897
Name DYD1_bin.9
Sample SMP0025
Taxonomy
Kingdom Bacteria
Phylum Pseudomonadota
Class Gammaproteobacteria
Order Burkholderiales
Family SG8-41
Genus SG8-41
Species
Assembly information
Completeness (%) 83.85
Contamination (%) 4.47
GC content (%) 65.0
N50 (bp) 20,410
Genome size (bp) 3,600,462

Location

Module

Module ID Module name Total genes Total steps Contain genes Contain steps Percentage of genes Percentage of steps

Genes3435

Gene name Description KEGG GOs EC E-value Score Sequence
DYD1_k127_10345_0 Belongs to the peptidase S1C family K04771 - 3.4.21.107 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001216 537.0
DYD1_k127_10345_1 Patatin-like phospholipase K07001 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000946 427.0
DYD1_k127_10345_2 His Kinase A (phosphoacceptor) domain K02484,K07645 - 2.7.13.3 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001602 435.0
DYD1_k127_10345_3 response regulator K02483,K07666 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000009714 263.0
DYD1_k127_10345_4 NUDIX domain - - - 0.0000000000000000000000000000000000000000000000001219 186.0
DYD1_k127_10345_5 PFAM transcription elongation factor GreA GreB - - - 0.00000000000000000000000000000001034 133.0
DYD1_k127_10345_6 - - - - 0.00000000000000000000005145 100.0
DYD1_k127_1076423_0 Acetyl-coenzyme A synthetase N-terminus K01907 - 6.2.1.16 3.95e-289 897.0
DYD1_k127_1076423_1 HELICc2 K03722 - 3.6.4.12 3.461e-253 798.0
DYD1_k127_1076423_10 EamA-like transporter family - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000001003 299.0
DYD1_k127_1076423_11 Belongs to the multicopper oxidase YfiH RL5 family K05810 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000007574 285.0
DYD1_k127_1076423_12 synthesis repressor, PhaR - - - 0.0000000000000000000000000000000000000000000000000000000000000000000002194 246.0
DYD1_k127_1076423_13 Bacterial type II and III secretion system protein - - - 0.0000000000000000000000000000000000000000000000000000004915 205.0
DYD1_k127_1076423_14 PFAM NLP P60 protein - - - 0.00000000000000000000000000000000000000004963 156.0
DYD1_k127_1076423_15 Glycine zipper 2TM domain - - - 0.000000000000000000000000000000232 131.0
DYD1_k127_1076423_16 SdpI/YhfL protein family - - - 0.000000000000000000371 98.0
DYD1_k127_1076423_17 Lytic murein transglycosylase B K08305 - - 0.0000000000001616 72.0
DYD1_k127_1076423_2 Catalyzes the methylthiolation of an aspartic acid residue of ribosomal protein S12 K14441 - 2.8.4.4 3.307e-225 707.0
DYD1_k127_1076423_3 ABC-type Fe3 transport system, permease component K02011 - - 3.431e-209 664.0
DYD1_k127_1076423_4 Poly(R)-hydroxyalkanoic acid synthase, class I K03821 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007012 623.0
DYD1_k127_1076423_5 Belongs to the ABC transporter superfamily K02010 - 3.6.3.30 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001622 475.0
DYD1_k127_1076423_6 Bacterial extracellular solute-binding protein K02012 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005453 452.0
DYD1_k127_1076423_7 Belongs to the short-chain dehydrogenases reductases (SDR) family K00023 - 1.1.1.36 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004507 396.0
DYD1_k127_1076423_8 Responsible for synthesis of pseudouridine from uracil K06180 - 5.4.99.23 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004157 383.0
DYD1_k127_1076423_9 Part of the outer membrane protein assembly complex, which is involved in assembly and insertion of beta-barrel proteins into the outer membrane K05807 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001215 363.0
DYD1_k127_1084270_0 Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain K00256 - 1.3.99.16 1.023e-223 713.0
DYD1_k127_1084270_1 Threonine dehydratase K01754 - 4.3.1.19 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001824 406.0
DYD1_k127_1084270_10 Protein of unknown function (DUF465) - - - 0.0000000000002929 73.0
DYD1_k127_1084270_11 COG3909 Cytochrome c556 - - - 0.0000000000007889 75.0
DYD1_k127_1084270_12 - - - - 0.00003832 54.0
DYD1_k127_1084270_2 Cytochrome c - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000003967 287.0
DYD1_k127_1084270_3 Hydrolyzes cAMP to 5'-AMP. Plays an important regulatory role in modulating the intracellular concentration of cAMP, thereby influencing cAMP-dependent processes K03651 - 3.1.4.53 0.000000000000000000000000000000000000000000000000000000000000000000000000003948 261.0
DYD1_k127_1084270_4 MarC family integral membrane protein K05595 GO:0005575,GO:0005623,GO:0005886,GO:0016020,GO:0044464,GO:0071944 - 0.0000000000000000000000000000000000000000000000000000000000006325 216.0
DYD1_k127_1084270_5 COG2080 Aerobic-type carbon monoxide dehydrogenase, small subunit CoxS CutS homologs K07302 - 1.3.99.16 0.000000000000000000000000000000000000000000000000000000002596 204.0
DYD1_k127_1084270_6 FCD - - - 0.000000000000000000000000000000000000000000000000008089 186.0
DYD1_k127_1084270_7 Required for disulfide bond formation in some periplasmic proteins. Acts by oxidizing the DsbA protein K03611 - - 0.000000000000000000000000000000000000000000000004964 177.0
DYD1_k127_1084270_8 Class I peptide chain release factor K15034 GO:0003674,GO:0003676,GO:0003723,GO:0003747,GO:0003824,GO:0004045,GO:0005488,GO:0006412,GO:0006414,GO:0006415,GO:0006417,GO:0006518,GO:0006807,GO:0008079,GO:0008135,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009889,GO:0009987,GO:0010467,GO:0010468,GO:0010556,GO:0010608,GO:0016043,GO:0016150,GO:0016787,GO:0016788,GO:0019222,GO:0019538,GO:0022411,GO:0031323,GO:0031326,GO:0032268,GO:0032984,GO:0034248,GO:0034641,GO:0034645,GO:0043021,GO:0043022,GO:0043043,GO:0043170,GO:0043603,GO:0043604,GO:0043624,GO:0043933,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044877,GO:0050789,GO:0050794,GO:0051171,GO:0051246,GO:0052689,GO:0060255,GO:0065007,GO:0071704,GO:0071840,GO:0072344,GO:0080090,GO:0097159,GO:0140098,GO:0140101,GO:1901363,GO:1901564,GO:1901566,GO:1901576,GO:2000112 - 0.0000000000000000000000000000000000000000000000112 175.0
DYD1_k127_1084270_9 Dodecin K09165 - - 0.000000000000000000000001417 104.0
DYD1_k127_109359_0 Proton pump that utilizes the energy of pyrophosphate hydrolysis as the driving force for proton movement across the membrane. Generates a proton motive force K15987 - 3.6.1.1 2.243e-317 984.0
DYD1_k127_109359_1 Key enzyme in the regulation of glycerol uptake and metabolism. Catalyzes the phosphorylation of glycerol to yield sn- glycerol 3-phosphate K00864 GO:0003674,GO:0003824,GO:0004370,GO:0005975,GO:0006066,GO:0006071,GO:0006793,GO:0006796,GO:0008150,GO:0008152,GO:0009987,GO:0016301,GO:0016310,GO:0016740,GO:0016772,GO:0016773,GO:0019400,GO:0019751,GO:0044237,GO:0044238,GO:0044262,GO:0044281,GO:0071704,GO:1901615 2.7.1.30 7.542e-225 705.0
DYD1_k127_109359_10 Major Facilitator Superfamily - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000192 264.0
DYD1_k127_109359_11 Major Facilitator Superfamily - - - 0.00000000000000000000000000000000000000000000000000000000000000000008942 248.0
DYD1_k127_109359_12 carbonate dehydratase activity - - - 0.000000000000000000000000000000000000000000000000000000000000005866 222.0
DYD1_k127_109359_13 LysR substrate binding domain - - - 0.00000000000000000000000000000000000000000000000000373 193.0
DYD1_k127_109359_14 Transcriptional regulator - - - 0.0000000000000000000000000000000000000000000007013 177.0
DYD1_k127_109359_15 Sulfite exporter TauE/SafE K07090 - - 0.00000000000000000000000001227 119.0
DYD1_k127_109359_16 Cupin domain - - - 0.0000000000000000000514 96.0
DYD1_k127_109359_17 Belongs to the cysteine synthase cystathionine beta- synthase family K01738,K17216 - 2.5.1.134,2.5.1.47 0.0000000000004818 70.0
DYD1_k127_109359_19 - - - - 0.000000001133 68.0
DYD1_k127_109359_2 Zinc-binding dehydrogenase K00001 - 1.1.1.1 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002306 554.0
DYD1_k127_109359_3 PFAM AMP-dependent synthetase and ligase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001119 474.0
DYD1_k127_109359_4 Catalyzes the phosphorylation of D-fructose 6-phosphate, the first committing step of glycolysis. Uses inorganic phosphate (PPi) as phosphoryl donor instead of ATP like common ATP-dependent phosphofructokinases (ATP-PFKs), which renders the reaction reversible, and can thus function both in glycolysis and gluconeogenesis. Consistently, PPi-PFK can replace the enzymes of both the forward (ATP-PFK) and reverse (fructose-bisphosphatase (FBPase)) reactions K21071 - 2.7.1.11,2.7.1.90 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003664 379.0
DYD1_k127_109359_5 Catalyzes the reversible transfer of the terminal phosphate group between ATP and AMP. Plays an important role in cellular energy homeostasis and in adenine nucleotide metabolism K00939 - 2.7.4.3 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000997 315.0
DYD1_k127_109359_6 Binding-protein-dependent transport system inner membrane component K02034 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000978 309.0
DYD1_k127_109359_7 Activates KDO (a required 8-carbon sugar) for incorporation into bacterial lipopolysaccharide in Gram-negative bacteria K00979 - 2.7.7.38 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003931 303.0
DYD1_k127_109359_8 Catalyzes the phosphorylation of D-fructose 6-phosphate, the first committing step of glycolysis. Uses inorganic phosphate (PPi) as phosphoryl donor instead of ATP like common ATP-dependent phosphofructokinases (ATP-PFKs), which renders the reaction reversible, and can thus function both in glycolysis and gluconeogenesis. Consistently, PPi-PFK can replace the enzymes of both the forward (ATP-PFK) and reverse (fructose-bisphosphatase (FBPase)) reactions K21071 - 2.7.1.11,2.7.1.90 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000001376 298.0
DYD1_k127_109359_9 ATPase MipZ K03496 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000005974 282.0
DYD1_k127_1094289_0 Belongs to the CarB family K01955 - 6.3.5.5 0.0 1259.0
DYD1_k127_1094289_1 Acts as a processive, ATP-dependent zinc metallopeptidase for both cytoplasmic and membrane proteins. Plays a role in the quality control of integral membrane proteins K03798 GO:0003674,GO:0003824,GO:0004176,GO:0005488,GO:0005515,GO:0005575,GO:0005623,GO:0005886,GO:0006508,GO:0006807,GO:0008150,GO:0008152,GO:0008233,GO:0008237,GO:0009056,GO:0009057,GO:0016020,GO:0016462,GO:0016787,GO:0016817,GO:0016818,GO:0016887,GO:0017111,GO:0019538,GO:0030163,GO:0042623,GO:0042802,GO:0043170,GO:0044238,GO:0044464,GO:0070011,GO:0071704,GO:0071944,GO:0140096,GO:1901564,GO:1901565,GO:1901575 - 0.0 1068.0
DYD1_k127_1094289_10 NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient K00331 - 1.6.5.3 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003135 318.0
DYD1_k127_1094289_11 Involved in the gluconeogenesis. Catalyzes stereospecifically the conversion of dihydroxyacetone phosphate (DHAP) to D-glyceraldehyde-3-phosphate (G3P) K01803 - 5.3.1.1 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004871 315.0
DYD1_k127_1094289_12 NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient K00332 - 1.6.5.3 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000001193 297.0
DYD1_k127_1094289_13 Necessary for efficient RNA polymerase transcription elongation past template-encoded arresting sites. The arresting sites in DNA have the property of trapping a certain fraction of elongating RNA polymerases that pass through, resulting in locked ternary complexes. Cleavage of the nascent transcript by cleavage factors such as GreA or GreB allows the resumption of elongation from the new 3'terminus. GreA releases sequences of 2 to 3 nucleotides K03624 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000002161 261.0
DYD1_k127_1094289_14 Specifically methylates the uridine in position 2552 of 23S rRNA at the 2'-O position of the ribose in the fully assembled 50S ribosomal subunit K02427 - 2.1.1.166 0.0000000000000000000000000000000000000000000000000000000000000000000001338 244.0
DYD1_k127_1094289_15 Thioredoxin-like [2Fe-2S] ferredoxin K00334 - 1.6.5.3 0.000000000000000000000000000000000000000000000000000000000000000000008789 247.0
DYD1_k127_1094289_16 NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient K00330 - 1.6.5.3 0.000000000000000000000000000000000000000000000000000001083 194.0
DYD1_k127_1094289_17 Preprotein translocase SecG subunit K03075 - - 0.00000000000000000000000000000202 124.0
DYD1_k127_1094289_18 RNA-binding protein containing KH domain possibly ribosomal protein - - - 0.0000000000000000000000001161 115.0
DYD1_k127_1094289_2 NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient K00333 - 1.6.5.3 3.976e-248 769.0
DYD1_k127_1094289_3 Catalyzes the conversion of glucosamine-6-phosphate to glucosamine-1-phosphate K03431 - 5.4.2.10 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008784 600.0
DYD1_k127_1094289_4 NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain K00335 - 1.6.5.3 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005701 520.0
DYD1_k127_1094289_5 probably responsible for the translocation of the substrate across the membrane K02037 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000101 493.0
DYD1_k127_1094289_6 PBP superfamily domain K02040 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001417 477.0
DYD1_k127_1094289_7 Phosphate transport system permease protein K02038 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000431 466.0
DYD1_k127_1094289_8 Part of the ABC transporter complex PstSACB involved in phosphate import. Responsible for energy coupling to the transport system K02036 - 3.6.3.27 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000137 457.0
DYD1_k127_1094289_9 dihydropteroate synthase K00796 - 2.5.1.15 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004973 336.0
DYD1_k127_1099579_0 Helicase associated domain (HA2) Add an annotation K03578 - 3.6.4.13 0.0 1602.0
DYD1_k127_1099579_1 Forms oxaloacetate, a four-carbon dicarboxylic acid source for the tricarboxylic acid cycle K01595 - 4.1.1.31 2.043e-294 942.0
DYD1_k127_1099579_10 Belongs to the pseudouridine synthase RsuA family K06181 GO:0000154,GO:0000455,GO:0001522,GO:0003674,GO:0003824,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006139,GO:0006364,GO:0006396,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0009451,GO:0009982,GO:0009987,GO:0010467,GO:0016070,GO:0016072,GO:0016853,GO:0016866,GO:0022613,GO:0031118,GO:0034470,GO:0034641,GO:0034660,GO:0042254,GO:0043170,GO:0043412,GO:0044085,GO:0044237,GO:0044238,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0071704,GO:0071840,GO:0090304,GO:1901360 5.4.99.20 0.00000000000000000000000000000000000000000000000000000000000000000006192 235.0
DYD1_k127_1099579_11 membrane - - - 0.000000000000000000000000000000000000000000000000000000000000012 221.0
DYD1_k127_1099579_12 Alpha/beta hydrolase family - - - 0.000000000000000000000000000000000000000000000000000001583 198.0
DYD1_k127_1099579_13 Belongs to the phosphoglycerate mutase family K15634 - 5.4.2.12 0.0000000000000000000000000000000000000000000000000001343 198.0
DYD1_k127_1099579_14 DGC domain - - - 0.000000000000000000000000000000000000000005054 160.0
DYD1_k127_1099579_15 membrane transporter protein K07090 - - 0.000000000000000000000000000000000000003578 155.0
DYD1_k127_1099579_17 - - - - 0.000273 52.0
DYD1_k127_1099579_2 Belongs to the IlvD Edd family K01687 - 4.2.1.9 9.121e-265 825.0
DYD1_k127_1099579_3 RESPONSE REGULATOR receiver - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001325 590.0
DYD1_k127_1099579_4 Glutamine cyclotransferase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001074 369.0
DYD1_k127_1099579_5 Bacterial protein of unknown function (DUF899) - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006864 348.0
DYD1_k127_1099579_6 Putative aminopeptidase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007308 351.0
DYD1_k127_1099579_7 Phosphatidylethanolamine-binding protein K06910 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004466 318.0
DYD1_k127_1099579_8 PFAM aminotransferase, class I - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000002607 281.0
DYD1_k127_1099579_9 Aldolase/RraA - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000003689 274.0
DYD1_k127_1113458_0 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain K00018,K00058,K03778 - 1.1.1.28,1.1.1.29,1.1.1.399,1.1.1.95 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002247 357.0
DYD1_k127_1113458_1 Tripartite tricarboxylate transporter family receptor - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000004653 295.0
DYD1_k127_1113458_2 Tripartite tricarboxylate transporter family receptor - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000002633 278.0
DYD1_k127_1113458_3 Carboxymuconolactone decarboxylase - - - 0.00000000000000000000000000000000000000000000000000000000000000248 225.0
DYD1_k127_1113458_4 COG1028 Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) K00046 - 1.1.1.69 0.000000000000000000000000000000000000000000000000000009584 200.0
DYD1_k127_1113458_5 Protein conserved in bacteria K07793 - - 0.00000000000000000000000000000000000000000000000000167 189.0
DYD1_k127_1113458_6 Tripartite tricarboxylate transporter TctB family - - - 0.0008605 49.0
DYD1_k127_1191142_0 Tripartite tricarboxylate transporter TctA family - - - 4.435e-207 663.0
DYD1_k127_1191142_1 AMP-binding enzyme C-terminal domain K00666 - - 3.184e-204 648.0
DYD1_k127_1191142_10 thiamine-containing compound biosynthetic process K02051 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004267 357.0
DYD1_k127_1191142_11 oxidation-reduction process K09022 - 3.5.99.10 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001136 360.0
DYD1_k127_1191142_12 Taurine catabolism dioxygenase TauD, TfdA family - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001258 336.0
DYD1_k127_1191142_13 Cache domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000001396 322.0
DYD1_k127_1191142_14 Tripartite tricarboxylate transporter family receptor - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000001536 294.0
DYD1_k127_1191142_15 NMT1/THI5 like K02051 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000002085 283.0
DYD1_k127_1191142_16 Protein conserved in bacteria - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000005084 278.0
DYD1_k127_1191142_17 PFAM conserved - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000002219 271.0
DYD1_k127_1191142_18 - - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000003595 258.0
DYD1_k127_1191142_19 Short repeat of unknown function (DUF308) - - - 0.0000000000000000000000000000000000000000000000000000000000006325 216.0
DYD1_k127_1191142_2 PFAM Serine threonine-protein kinase-like domain K12132 - 2.7.11.1 4.003e-197 633.0
DYD1_k127_1191142_20 Tripartite tricarboxylate transporter family receptor - - - 0.0000000000000000000000000000000000000000000000003001 191.0
DYD1_k127_1191142_21 Bacterial extracellular solute-binding protein, family 7 - - - 0.00000000000000000000000000000000000000000000192 178.0
DYD1_k127_1191142_22 Major Facilitator Superfamily - - - 0.00000000000000000000000000000000000005079 150.0
DYD1_k127_1191142_23 Cupin domain - - - 0.00000000000000000000000000000001559 134.0
DYD1_k127_1191142_24 Domain of unknown function (DUF1840) - - - 0.0000000000000000000000000000008348 124.0
DYD1_k127_1191142_25 Cytochrome c - - - 0.00000000000000000000000000001303 120.0
DYD1_k127_1191142_26 - K19168 - - 0.00000000000001845 79.0
DYD1_k127_1191142_27 Endoribonuclease L-PSP - - - 0.00000000000001883 80.0
DYD1_k127_1191142_28 Uncharacterized ACR, COG1678 K07735 GO:0005575,GO:0005623,GO:0005886,GO:0016020,GO:0044464,GO:0071944 - 0.0000000000004513 79.0
DYD1_k127_1191142_29 Antibiotic biosynthesis monooxygenase - - - 0.0000008686 56.0
DYD1_k127_1191142_3 Belongs to the citrate synthase family K01647,K01659 - 2.3.3.1,2.3.3.5 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002516 577.0
DYD1_k127_1191142_30 - - - - 0.0002776 49.0
DYD1_k127_1191142_4 TIGRFAM type I secretion membrane fusion protein, HlyD - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001354 462.0
DYD1_k127_1191142_5 PFAM major facilitator superfamily MFS_1 - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004386 457.0
DYD1_k127_1191142_6 Histidine kinase K10125 - 2.7.13.3 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000133 466.0
DYD1_k127_1191142_7 Haemolysin-type calcium-binding region K01406 - 3.4.24.40 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003291 484.0
DYD1_k127_1191142_8 COG0683 ABC-type branched-chain amino acid transport systems, periplasmic component - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004185 417.0
DYD1_k127_1191142_9 phosphate acetyltransferase K00625 - 2.3.1.8 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002395 377.0
DYD1_k127_1218613_0 Heat shock 70 kDa protein K04043 GO:0000166,GO:0000988,GO:0000989,GO:0003674,GO:0003824,GO:0005488,GO:0005515,GO:0005524,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006457,GO:0006458,GO:0006950,GO:0006986,GO:0008144,GO:0008150,GO:0008270,GO:0009266,GO:0009408,GO:0009628,GO:0009889,GO:0009987,GO:0010033,GO:0010556,GO:0016043,GO:0016462,GO:0016787,GO:0016817,GO:0016818,GO:0016887,GO:0016989,GO:0017076,GO:0017111,GO:0019219,GO:0019222,GO:0022607,GO:0030554,GO:0031323,GO:0031326,GO:0032553,GO:0032555,GO:0032559,GO:0032991,GO:0033554,GO:0034620,GO:0035639,GO:0035966,GO:0035967,GO:0036094,GO:0042221,GO:0043167,GO:0043168,GO:0043169,GO:0043531,GO:0043933,GO:0044085,GO:0044183,GO:0044424,GO:0044444,GO:0044464,GO:0046872,GO:0046914,GO:0050789,GO:0050794,GO:0050896,GO:0051082,GO:0051084,GO:0051085,GO:0051087,GO:0051171,GO:0051252,GO:0051716,GO:0060255,GO:0061077,GO:0065003,GO:0065007,GO:0070887,GO:0071310,GO:0071840,GO:0080090,GO:0097159,GO:0097367,GO:0140110,GO:1901265,GO:1901363,GO:1903506,GO:2001141 - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000305 595.0
DYD1_k127_1218613_1 May be involved in recombinational repair of damaged DNA K03631 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001868 589.0
DYD1_k127_1218613_10 Participates actively in the response to hyperosmotic and heat shock by preventing the aggregation of stress-denatured proteins, in association with DnaK and GrpE. It is the nucleotide exchange factor for DnaK and may function as a thermosensor. Unfolded proteins bind initially to DnaJ K03687 - - 0.000000000000000000000000000000000000000000000000000000000000001306 224.0
DYD1_k127_1218613_11 - - - - 0.0000000000000000000000000000000000000000000000000000000144 204.0
DYD1_k127_1218613_12 Uncharacterized conserved protein (DUF2249) - - - 0.0000000000000000000000000000000000000000008163 165.0
DYD1_k127_1218613_13 myo-inosose-2 dehydratase activity K00457,K06606 - 1.13.11.27,5.3.99.11 0.0000000000000000000000000000000000001016 147.0
DYD1_k127_1218613_14 Part of the outer membrane protein assembly complex, which is involved in assembly and insertion of beta-barrel proteins into the outer membrane K06186 - - 0.0000000000000000000000001093 115.0
DYD1_k127_1218613_2 Belongs to the CarA family K01956 - 6.3.5.5 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005993 571.0
DYD1_k127_1218613_3 CoA-transferase family III - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005565 496.0
DYD1_k127_1218613_4 Negative regulator of class I heat shock genes (grpE- dnaK-dnaJ and groELS operons). Prevents heat-shock induction of these operons K03705 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001555 462.0
DYD1_k127_1218613_5 Belongs to the CarB family K01955 - 6.3.5.5 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006895 437.0
DYD1_k127_1218613_6 Catalyzes the ferrous insertion into protoporphyrin IX K01772 - 4.99.1.1,4.99.1.9 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003915 422.0
DYD1_k127_1218613_7 Catalyzes the conversion of 4-hydroxy- tetrahydrodipicolinate (HTPA) to tetrahydrodipicolinate K00215 GO:0003674,GO:0003824,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006082,GO:0006520,GO:0006807,GO:0008150,GO:0008152,GO:0008652,GO:0008839,GO:0009058,GO:0009987,GO:0016053,GO:0016491,GO:0016627,GO:0016628,GO:0019752,GO:0019877,GO:0043436,GO:0043648,GO:0043650,GO:0044237,GO:0044238,GO:0044249,GO:0044281,GO:0044283,GO:0044424,GO:0044444,GO:0044464,GO:0046394,GO:0046451,GO:0055114,GO:0071704,GO:1901564,GO:1901566,GO:1901576 1.17.1.8 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002631 365.0
DYD1_k127_1218613_8 Involved in the regulation of the intracellular balance of NAD and NADP, and is a key enzyme in the biosynthesis of NADP. Catalyzes specifically the phosphorylation on 2'-hydroxyl of the adenosine moiety of NAD to yield NADP K00858 - 2.7.1.23 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001245 357.0
DYD1_k127_1218613_9 Belongs to the Fur family K03711 - - 0.00000000000000000000000000000000000000000000000000000000000000000005089 233.0
DYD1_k127_1249898_0 Catalyzes the reductive methylation of 2'-deoxyuridine- 5'-monophosphate (dUMP) to 2'-deoxythymidine-5'-monophosphate (dTMP) while utilizing 5,10-methylenetetrahydrofolate (mTHF) as the methyl donor and reductant in the reaction, yielding dihydrofolate (DHF) as a by-product. This enzymatic reaction provides an intracellular de novo source of dTMP, an essential precursor for DNA biosynthesis K00560 - 2.1.1.45 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002259 461.0
DYD1_k127_1249898_1 Belongs to the peptidase M17 family K01255 - 3.4.11.1 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005381 329.0
DYD1_k127_1249898_2 Key enzyme in folate metabolism. Catalyzes an essential reaction for de novo glycine and purine synthesis, and for DNA precursor synthesis K00287,K18589 - 1.5.1.3 0.0000000000000000000000000000000000000000000000000002051 190.0
DYD1_k127_1249898_3 alpha beta - - - 0.00000000000000000000000000000000000000000000000005075 187.0
DYD1_k127_1249898_4 Belongs to the Orn Lys Arg decarboxylase class-II family K01581 - 4.1.1.17 0.0000000000000000000000000000000000000000000000001167 177.0
DYD1_k127_1249898_5 Sel1-like repeats. K07126 - - 0.0000000000000000000000000000000000003207 152.0
DYD1_k127_1256039_0 Catalyzes the hydrolysis of N-succinyl-L,L- diaminopimelic acid (SDAP), forming succinate and LL-2,6- diaminoheptanedioate (DAP), an intermediate involved in the bacterial biosynthesis of lysine and meso-diaminopimelic acid, an essential component of bacterial cell walls K01439 - 3.5.1.18 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000215 557.0
DYD1_k127_1256039_1 PFAM MmgE PrpD family protein - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005302 496.0
DYD1_k127_1256039_2 Acyl-CoA dehydrogenase, middle domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003259 394.0
DYD1_k127_1256039_3 PFAM conserved - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000006197 292.0
DYD1_k127_1256039_4 Redoxin - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000118 266.0
DYD1_k127_1256039_5 COG1042 Acyl-CoA synthetase (NDP forming) - - - 0.0000000000000000000000000000000000000000006428 160.0
DYD1_k127_12751_0 Amidase K02433 - 6.3.5.6,6.3.5.7 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008948 508.0
DYD1_k127_12751_1 Amidase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001788 386.0
DYD1_k127_12751_2 metallophosphoesterase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002281 349.0
DYD1_k127_12751_3 Adenylate cyclase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000001199 302.0
DYD1_k127_12751_4 ATPases associated with a variety of cellular activities - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000004509 261.0
DYD1_k127_12751_5 Binding-protein-dependent transport system inner membrane component K02050 - - 0.0000000000000000000000000000000000000000000000000000005866 204.0
DYD1_k127_12751_6 ABC transporter, solute-binding protein K02012 - - 0.000000000000000000000000001205 126.0
DYD1_k127_12751_7 YHS domain protein - - - 0.000000000000000000000000002647 117.0
DYD1_k127_12751_8 NMT1/THI5 like - - - 0.00000000000000000000000003784 121.0
DYD1_k127_12751_9 Aminotransferase class-III K01845 - 5.4.3.8 0.000000009534 68.0
DYD1_k127_128545_0 Belongs to the prokaryotic molybdopterin-containing oxidoreductase family K00123,K22015 - 1.17.1.9,1.17.99.7 0.0 1437.0
DYD1_k127_128545_1 formate-tetrahydrofolate ligase activity K01938 - 6.3.4.3 3.903e-295 912.0
DYD1_k127_128545_10 KR domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000008597 284.0
DYD1_k127_128545_11 Catalyzes the condensation of isopentenyl diphosphate (IPP) with allylic pyrophosphates generating different type of terpenoids K00806 - 2.5.1.31 0.0000000000000000000000000000000000000000000000002424 189.0
DYD1_k127_128545_12 PFAM sodium calcium exchanger membrane region K07301 - - 0.00000000000000000000000000000000000000000002024 174.0
DYD1_k127_128545_13 Sodium/calcium exchanger protein K07301 - - 0.000000000000000000000000000000000000000001637 168.0
DYD1_k127_128545_14 universal stress protein - - - 0.00000000000000000000000000000000000000006105 155.0
DYD1_k127_128545_15 Tripartite tricarboxylate transporter family receptor - - - 0.0000000000000000003478 89.0
DYD1_k127_128545_2 24 kD subunit K00122 - 1.17.1.9 1.895e-269 839.0
DYD1_k127_128545_3 Succinyl-CoA synthetase functions in the citric acid cycle (TCA), coupling the hydrolysis of succinyl-CoA to the synthesis of either ATP or GTP and thus represents the only step of substrate-level phosphorylation in the TCA. The beta subunit provides nucleotide specificity of the enzyme and binds the substrate succinate, while the binding sites for coenzyme A and phosphate are found in the alpha subunit K01903 - 6.2.1.5 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001638 598.0
DYD1_k127_128545_4 PFAM natural resistance-associated macrophage protein - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001802 552.0
DYD1_k127_128545_5 Mandelate racemase / muconate lactonizing enzyme, C-terminal domain K01684 - 4.2.1.6 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003438 505.0
DYD1_k127_128545_6 Succinyl-CoA synthetase functions in the citric acid cycle (TCA), coupling the hydrolysis of succinyl-CoA to the synthesis of either ATP or GTP and thus represents the only step of substrate-level phosphorylation in the TCA. The alpha subunit of the enzyme binds the substrates coenzyme A and phosphate, while succinate binding and nucleotide specificity is provided by the beta subunit K01902,K08692 GO:0003674,GO:0003824,GO:0004774,GO:0004776,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005739,GO:0005759,GO:0016874,GO:0016877,GO:0016878,GO:0031974,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0043233,GO:0044422,GO:0044424,GO:0044429,GO:0044444,GO:0044446,GO:0044464,GO:0070013 6.2.1.5,6.2.1.9 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001973 494.0
DYD1_k127_128545_7 MgtE intracellular - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009317 421.0
DYD1_k127_128545_8 Protein conserved in bacteria K07793 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001692 315.0
DYD1_k127_128545_9 Capsule synthesis protein K07282 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000002008 308.0
DYD1_k127_131751_0 TIGRFAM filamentous hemagglutinin family N-terminal domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006071 345.0
DYD1_k127_131751_1 TIGRFAM DNA polymerase III, alpha subunit K02337 - 2.7.7.7 0.000000000000000000000000000000000000000000000000000000000003164 217.0
DYD1_k127_131751_2 helix_turn_helix, Lux Regulon - - - 0.0000000000000000000000000000000000000000000000000000007242 201.0
DYD1_k127_131751_3 Histidine kinase - - - 0.000000000000000000000000000000000000000005716 179.0
DYD1_k127_131751_4 Histidine kinase - - - 0.00000000000000000000000000000000000001713 168.0
DYD1_k127_131751_5 DsrE/DsrF-like family K09004 - - 0.00000000000000000000000000000000000007865 149.0
DYD1_k127_131751_6 Domain of unknown function (DUF4410) - - - 0.00000000000000000000000000000000000008684 152.0
DYD1_k127_131751_7 DsrE/DsrF-like family K09004 - - 0.00000000000000000000000000000000000495 142.0
DYD1_k127_131751_8 Belongs to the acylphosphatase family K01512 - 3.6.1.7 0.000000000000000000000004912 104.0
DYD1_k127_131751_9 COG0515 Serine threonine protein kinase K12132 - 2.7.11.1 0.0000000007257 68.0
DYD1_k127_1368821_0 TonB dependent receptor K02014 - - 7.495e-226 721.0
DYD1_k127_1368821_1 Involved in lipid A export and possibly also in glycerophospholipid export and for biogenesis of the outer membrane. Transmembrane domains (TMD) form a pore in the inner membrane and the ATP-binding domain (NBD) is responsible for energy generation K02021,K11085 - - 2.726e-222 707.0
DYD1_k127_1368821_2 Amidohydrolase K03392 - 4.1.1.45 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002167 322.0
DYD1_k127_1368821_3 EVE domain - - - 0.000000000000000000000000000000000000000000000000000001369 196.0
DYD1_k127_1368821_4 Activator of cell division through the inhibition of FtsZ GTPase activity, therefore promoting FtsZ assembly into bundles of protofilaments necessary for the formation of the division Z ring. It is recruited early at mid-cell but it is not essential for cell division K09888 - - 0.0000000000000000000000000000000000002507 146.0
DYD1_k127_1368821_5 Tripartite tricarboxylate transporter family receptor - - - 0.0000000000000000000000001282 111.0
DYD1_k127_1368821_6 Isochorismatase family - - - 0.000000000000000000000656 104.0
DYD1_k127_1368821_7 - - - - 0.00000000000000003059 83.0
DYD1_k127_1423888_0 ATPase, P-type (transporting), HAD superfamily, subfamily IC K01537 - 3.6.3.8 2.004e-303 952.0
DYD1_k127_1423888_1 COG0010 Arginase agmatinase formimionoglutamate hydrolase, arginase family K00819 - 2.6.1.13 5.145e-232 738.0
DYD1_k127_1423888_10 LemA Family K03744 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000002003 260.0
DYD1_k127_1423888_11 serine threonine protein kinase K08282 - 2.7.11.1 0.0000000000000000000000000000000000000000000000000000000000000000000000000059 267.0
DYD1_k127_1423888_12 Belongs to the LOG family K06966 - 3.2.2.10 0.0000000000000000000000000000000000000000000000000000000000000000001337 236.0
DYD1_k127_1423888_13 Belongs to the short-chain dehydrogenases reductases (SDR) family - - - 0.0000000000000000000000000000000000000000000000000000000001659 212.0
DYD1_k127_1423888_14 DSBA-like thioredoxin domain - - - 0.0000000000000000000000000000000000000000000001859 174.0
DYD1_k127_1423888_15 Domain of unknown function (DUF1992) - - - 0.000000000000000000000000000000000003378 141.0
DYD1_k127_1423888_2 Aldehyde dehydrogenase family K00128 - 1.2.1.3 4.147e-221 697.0
DYD1_k127_1423888_3 Domain of unknown function (DUF4139) - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001752 481.0
DYD1_k127_1423888_4 L-lactate dehydrogenase K00101,K15054 - 1.1.2.3,1.1.99.31 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000592 467.0
DYD1_k127_1423888_5 Protein of unknown function (DUF3365) - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000587 374.0
DYD1_k127_1423888_6 Protein kinase domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002939 350.0
DYD1_k127_1423888_7 Alpha beta hydrolase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001769 326.0
DYD1_k127_1423888_8 - - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000009562 284.0
DYD1_k127_1423888_9 serine threonine protein kinase K08282 - 2.7.11.1 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000003101 291.0
DYD1_k127_1444824_0 Domain present in phytochromes and cGMP-specific phosphodiesterases. - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000527 617.0
DYD1_k127_1444824_1 signal transduction histidine kinase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006308 338.0
DYD1_k127_1444824_2 TIGRFAM PAS sensor protein - - - 0.0000000000000000000000000000000000000000000000000000000002097 212.0
DYD1_k127_1444824_3 two-component system K02485 - - 0.00000000000000000000000000000000000000000000000000007169 195.0
DYD1_k127_1460017_0 A helicase nuclease that prepares dsDNA breaks (DSB) for recombinational DNA repair. Binds to DSBs and unwinds DNA via a highly rapid and processive ATP-dependent bidirectional helicase activity. Unwinds dsDNA until it encounters a Chi (crossover hotspot instigator) sequence from the 3' direction. Cuts ssDNA a few nucleotides 3' to the Chi site. The properties and activities of the enzyme are changed at Chi. The Chi-altered holoenzyme produces a long 3'-ssDNA overhang and facilitates RecA-binding to the ssDNA for homologous DNA recombination and repair. Holoenzyme degrades any linearized DNA that is unable to undergo homologous recombination. In the holoenzyme this subunit contributes ATPase, 3'-5' helicase, exonuclease activity and loads RecA onto ssDNA K16898 - 3.6.4.12 0.0 1075.0
DYD1_k127_1460017_1 PD-(D/E)XK nuclease superfamily K16899 - 3.6.4.12 2.477e-239 770.0
DYD1_k127_1460017_10 - - - - 0.000000000002088 70.0
DYD1_k127_1460017_11 Antioxidant protein with alkyl hydroperoxidase activity. Required for the reduction of the AhpC active site cysteine residues and for the regeneration of the AhpC enzyme activity - - - 0.0000001182 58.0
DYD1_k127_1460017_12 - - - - 0.0000002139 57.0
DYD1_k127_1460017_13 Carboxymuconolactone decarboxylase family - - - 0.00001893 50.0
DYD1_k127_1460017_2 Catalyzes the sequential NAD-dependent oxidations of L- histidinol to L-histidinaldehyde and then to L-histidine K15509 - 1.1.1.308 7.641e-202 638.0
DYD1_k127_1460017_3 Taurine catabolism dioxygenase TauD, TfdA family K03119 - 1.14.11.17 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000805 318.0
DYD1_k127_1460017_4 NAD dependent epimerase/dehydratase family - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000571 298.0
DYD1_k127_1460017_5 - - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000002075 261.0
DYD1_k127_1460017_6 Ferredoxins are iron-sulfur proteins that transfer electrons in a wide variety of metabolic reactions K05524 - - 0.0000000000000000000000000000000000000000000000000000008184 194.0
DYD1_k127_1460017_7 Tripartite tricarboxylate transporter family receptor K07795 - - 0.0000000000000000000000000000000000000000000003521 182.0
DYD1_k127_1460017_8 Glyoxalase-like domain K08234 - - 0.00000000000000000000000000006386 123.0
DYD1_k127_1460017_9 Glyoxalase-like domain - - - 0.00000000000000000000000000009089 128.0
DYD1_k127_1465926_0 Belongs to the class-I aminoacyl-tRNA synthetase family K01869 - 6.1.1.4 0.0 1212.0
DYD1_k127_1465926_1 Helicase K03657 - 3.6.4.12 1.635e-316 987.0
DYD1_k127_1465926_10 Sulfur oxidation protein SoxY K17226 - - 0.00000000000000000000000000000000000001218 149.0
DYD1_k127_1465926_11 Sulphur oxidation protein SoxZ K17227 - - 0.00000000000000000000000002597 111.0
DYD1_k127_1465926_2 Pyridine nucleotide-disulphide oxidoreductase, dimerisation K00382 GO:0003674,GO:0003824,GO:0004148,GO:0005575,GO:0005622,GO:0005623,GO:0005634,GO:0005654,GO:0005737,GO:0005739,GO:0005759,GO:0006082,GO:0006084,GO:0006085,GO:0006086,GO:0006090,GO:0006139,GO:0006163,GO:0006164,GO:0006464,GO:0006637,GO:0006725,GO:0006732,GO:0006733,GO:0006753,GO:0006790,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009108,GO:0009117,GO:0009150,GO:0009152,GO:0009165,GO:0009259,GO:0009260,GO:0009987,GO:0016491,GO:0016651,GO:0016667,GO:0016668,GO:0018130,GO:0018335,GO:0019362,GO:0019438,GO:0019538,GO:0019637,GO:0019693,GO:0019752,GO:0031974,GO:0031981,GO:0032787,GO:0032991,GO:0033865,GO:0033866,GO:0033875,GO:0034030,GO:0034032,GO:0034033,GO:0034641,GO:0034654,GO:0035383,GO:0035384,GO:0036211,GO:0043170,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0043233,GO:0043412,GO:0043436,GO:0043543,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044272,GO:0044281,GO:0044422,GO:0044424,GO:0044428,GO:0044429,GO:0044444,GO:0044446,GO:0044464,GO:0045239,GO:0045240,GO:0045252,GO:0045254,GO:0046390,GO:0046483,GO:0046496,GO:0051186,GO:0051188,GO:0055086,GO:0055114,GO:0061732,GO:0070013,GO:0071616,GO:0071704,GO:0072521,GO:0072522,GO:0072524,GO:0090407,GO:0106077,GO:1901135,GO:1901137,GO:1901293,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576,GO:1902494,GO:1990204,GO:1990234 1.8.1.4 1.906e-259 812.0
DYD1_k127_1465926_3 Catalyzes the NADPH-dependent reduction of L-glutamate 5-phosphate into L-glutamate 5-semialdehyde and phosphate. The product spontaneously undergoes cyclization to form 1-pyrroline-5- carboxylate K00147 GO:0003674,GO:0003824,GO:0004350,GO:0006082,GO:0006520,GO:0006560,GO:0006561,GO:0006807,GO:0008150,GO:0008152,GO:0008652,GO:0009058,GO:0009064,GO:0009084,GO:0009987,GO:0016053,GO:0016491,GO:0016620,GO:0016903,GO:0018130,GO:0019752,GO:0043436,GO:0044237,GO:0044238,GO:0044249,GO:0044281,GO:0044283,GO:0046394,GO:0046483,GO:0055114,GO:0071704,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576,GO:1901605,GO:1901607 1.2.1.41 2.14e-199 628.0
DYD1_k127_1465926_4 TIGRFAM DNA polymerase III, delta subunit K02340 - 2.7.7.7 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000326 371.0
DYD1_k127_1465926_5 - - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000006155 308.0
DYD1_k127_1465926_6 C-type monoheme cytochrome, which is part of the SoxAX cytochrome complex involved in sulfur oxidation. The SoxAX complex catalyzes the formation of a heterodisulfide bond between the conserved cysteine residue on a sulfur carrier SoxYZ complex subunit SoxY and thiosulfate or other inorganic sulfur substrates. This leads to the liberation of two electrons, which may be transferred from the SoxAX complex to another cytochrome c that then channels them into the respiratory electron transport chain. Some electrons may be used for reductive CO(2) fixation K17222 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000001652 282.0
DYD1_k127_1465926_7 Belongs to the pseudomonas-type ThrB family K02204 - 2.7.1.39 0.000000000000000000000000000000000000000000000000007092 183.0
DYD1_k127_1465926_8 - - - - 0.000000000000000000000000000000000000000000002689 175.0
DYD1_k127_1465926_9 Together with LptD, is involved in the assembly of lipopolysaccharide (LPS) at the surface of the outer membrane. Required for the proper assembly of LptD. Binds LPS and may serve as the LPS recognition site at the outer membrane K03643 - - 0.00000000000000000000000000000000000000001105 160.0
DYD1_k127_1491329_0 protein related to plant photosystem II stability assembly factor - - - 3.127e-206 646.0
DYD1_k127_1491329_1 Sigma-70, region 4 K03088 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001075 574.0
DYD1_k127_1491329_10 ThiS family K03636 - - 0.00000000000000000000000000000008316 129.0
DYD1_k127_1491329_2 signal transduction protein containing a membrane domain, an EAL and a GGDEF domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000108 300.0
DYD1_k127_1491329_3 Rhomboid family - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000047 259.0
DYD1_k127_1491329_4 Glyoxalase-like domain K04750 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000009173 251.0
DYD1_k127_1491329_5 Polyketide cyclase / dehydrase and lipid transport - - - 0.000000000000000000000000000000000000000000000000000000000000000000000477 241.0
DYD1_k127_1491329_6 PFAM DGPFAETKE family protein - - - 0.0000000000000000000000000000000000000000000000000000000000001461 217.0
DYD1_k127_1491329_7 YCII-related domain - - - 0.00000000000000000000000000000000000000000000000000003672 196.0
DYD1_k127_1491329_8 deoxyhypusine monooxygenase activity K05384,K05386 - - 0.000000000000000000000000000000000000000000000002973 187.0
DYD1_k127_1491329_9 YCII-related domain - - - 0.000000000000000000000000000000000000000000000009755 174.0
DYD1_k127_152070_0 Belongs to the TPP enzyme family K01652 - 2.2.1.6 9.815e-241 756.0
DYD1_k127_152070_1 modulator of DNA gyrase K03592 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007013 608.0
DYD1_k127_152070_10 Serine hydrolase (FSH1) K06999 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000006107 280.0
DYD1_k127_152070_11 DJ-1/PfpI family - - - 0.0000000000000000000000000000000000000000000000000000000001088 210.0
DYD1_k127_152070_12 Protein of unknown function (DUF615) K09889 - - 0.000000000000000000000000000000000123 140.0
DYD1_k127_152070_13 mandelate racemase muconate lactonizing K22209 - 4.2.1.81 0.00000000000000000000006852 98.0
DYD1_k127_152070_14 - - - - 0.00000000000003623 74.0
DYD1_k127_152070_15 - - - - 0.00000000001252 71.0
DYD1_k127_152070_16 - - - - 0.0000001625 56.0
DYD1_k127_152070_2 Vacuole effluxer Atg22 like K06902 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001312 584.0
DYD1_k127_152070_3 PFAM L-carnitine dehydratase bile acid-inducible protein F K07749 - 2.8.3.16 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009291 579.0
DYD1_k127_152070_4 COG2031 Short chain fatty acids transporter K02106 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005884 464.0
DYD1_k127_152070_5 Amidase K01426 - 3.5.1.4 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001194 463.0
DYD1_k127_152070_6 Probable molybdopterin binding domain K03831 - 2.7.7.75 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007227 312.0
DYD1_k127_152070_7 - - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000001819 308.0
DYD1_k127_152070_8 COG0526, thiol-disulfide isomerase and thioredoxins - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000316 297.0
DYD1_k127_152070_9 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000005764 289.0
DYD1_k127_1542552_0 Catalyzes the transformation of hydroxyatrazine to N-isopropylammelide and ethylamine in the atrazine degradation pathway K12960 - 3.5.4.28,3.5.4.31 1.185e-221 696.0
DYD1_k127_1542552_1 PFAM Pyridoxal-5'-phosphate-dependent protein beta subunit - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007794 533.0
DYD1_k127_1542552_2 Tripartite ATP-independent periplasmic transporter, DctM component - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002899 430.0
DYD1_k127_1542552_3 NMT1-like family K07080 - - 0.0000000000000000000000000000000000000000000000000002901 198.0
DYD1_k127_15467_0 PFAM peptidase M3A and M3B, thimet oligopeptidase F K01414 - 3.4.24.70 0.0 1013.0
DYD1_k127_15467_1 Catalyzes the reversible transfer of the terminal phosphate of ATP to form a long-chain polyphosphate (polyP) K00937 - 2.7.4.1 1.697e-317 985.0
DYD1_k127_15467_10 Belongs to the acetyltransferase family. ArgA subfamily K14682 - 2.3.1.1 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000127 571.0
DYD1_k127_15467_11 Low-affinity potassium transport system. Interacts with Trk system potassium uptake protein TrkA K03498 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004524 569.0
DYD1_k127_15467_12 ABC-type antimicrobial peptide transport system, permease component K02004 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001997 547.0
DYD1_k127_15467_13 Belongs to the ATCase OTCase family K00609 - 2.1.3.2 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000294 519.0
DYD1_k127_15467_14 Signal transduction histidine kinase, nitrogen specific K07708 - 2.7.13.3 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002245 409.0
DYD1_k127_15467_15 Catalyzes the dephosphorylation of undecaprenyl diphosphate (UPP). Confers resistance to bacitracin K06153 - 3.6.1.27 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006517 388.0
DYD1_k127_15467_16 CHAD - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002767 400.0
DYD1_k127_15467_17 Exodeoxyribonuclease III xth K01142 - 3.1.11.2 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001219 362.0
DYD1_k127_15467_18 Plays a role in the regulation of phosphate uptake K02039 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004965 328.0
DYD1_k127_15467_19 abc transporter K02003,K05685 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001565 325.0
DYD1_k127_15467_2 Diguanylate cyclase - - - 2.886e-282 900.0
DYD1_k127_15467_20 Catalyzes the reversible conversion of ribose-5- phosphate to ribulose 5-phosphate K01807 - 5.3.1.6 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000579 315.0
DYD1_k127_15467_21 Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family K02005,K13888 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000213 298.0
DYD1_k127_15467_22 Belongs to the UPF0301 (AlgH) family K07735 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000009596 276.0
DYD1_k127_15467_23 Catalyzes the anaerobic formation of alpha-ketobutyrate and ammonia from threonine in a two-step reaction. The first step involved a dehydration of threonine and a production of enamine intermediates (aminocrotonate), which tautomerizes to its imine form (iminobutyrate). Both intermediates are unstable and short- lived. The second step is the nonenzymatic hydrolysis of the enamine imine intermediates to form 2-ketobutyrate and free ammonia. In the low water environment of the cell, the second step is accelerated by RidA K01754 GO:0006082,GO:0006520,GO:0006566,GO:0006807,GO:0008150,GO:0008152,GO:0009066,GO:0009987,GO:0019752,GO:0043436,GO:0044237,GO:0044238,GO:0044281,GO:0071704,GO:1901564,GO:1901605 4.3.1.19 0.000000000000000000000000000000000000000000000000000000000000000000000000000003172 265.0
DYD1_k127_15467_24 RNA methyltransferase K09761 - 2.1.1.193 0.00000000000000000000000000000000000000000000000000000000000000000000003415 249.0
DYD1_k127_15467_25 Rhodanese Homology Domain - - - 0.0000000000000000000000000000000000000000000000000000000000003174 215.0
DYD1_k127_15467_26 Phosphoribosyl transferase domain K02825 - 2.4.2.9 0.000000000000000000000000000000000000000000000000000000002484 204.0
DYD1_k127_15467_27 Major facilitator Superfamily - - - 0.000000000000000000000000000000000000000000000000001718 197.0
DYD1_k127_15467_28 Phosphoglycerate mutase family K08296 - - 0.000000000000000000000000000000000000000000000001723 178.0
DYD1_k127_15467_29 Domain of unknown function (DUF427) - - - 0.0000000000000000000000000000000000000000000009946 166.0
DYD1_k127_15467_3 TIGRFAM glutamine synthetase, type I K01915,K20712 GO:0003674,GO:0003824,GO:0006725,GO:0008150,GO:0008152,GO:0009987,GO:0016853,GO:0016866,GO:0034022,GO:0042537,GO:0044237,GO:0050486,GO:0071704,GO:1901360 5.4.4.3,6.3.1.2 6.363e-241 756.0
DYD1_k127_15467_30 Could be a nuclease involved in processing of the 5'-end of pre-16S rRNA K07447 - - 0.00000000000000000000000000000000000000005641 156.0
DYD1_k127_15467_31 Could be a mediator in iron transactions between iron acquisition and iron-requiring processes, such as synthesis and or repair of Fe-S clusters in biosynthetic enzymes - - - 0.00000000000000000000000000000000000000006508 153.0
DYD1_k127_15467_32 Domain of unknown function (DUF4124) - - - 0.00000000000000000000000000000000006338 141.0
DYD1_k127_15467_33 Domain of unknown function (DUF4124) - - - 0.00000000000000000000000000000238 127.0
DYD1_k127_15467_34 Domain of unknown function (DUF4124) - - - 0.0000000002936 66.0
DYD1_k127_15467_4 COG2204 Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains K07712 - - 6.802e-218 684.0
DYD1_k127_15467_5 TrkA-N domain protein K03499 - - 1.162e-209 661.0
DYD1_k127_15467_6 dihydroorotase K01465 - 3.5.2.3 5.533e-209 655.0
DYD1_k127_15467_7 PFAM DNA photolyase FAD-binding K01669 - 4.1.99.3 2.121e-204 646.0
DYD1_k127_15467_8 Low-affinity potassium transport system. Interacts with Trk system potassium uptake protein TrkA K03498 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006806 586.0
DYD1_k127_15467_9 Ppx GppA phosphatase K01524 - 3.6.1.11,3.6.1.40 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004355 581.0
DYD1_k127_1574985_0 Class II Aldolase and Adducin N-terminal domain - - - 1.807e-290 905.0
DYD1_k127_1574985_1 GMP synthase C terminal domain K01951 - 6.3.5.2 1.165e-284 897.0
DYD1_k127_1574985_10 Catalyzes the deamination of adenosine to inosine at the wobble position 34 of tRNA(Arg2) K11991 - 3.5.4.33 0.0000000000000000000000000000000000000000000000000000000000000417 218.0
DYD1_k127_1574985_11 COG0454 Histone acetyltransferase HPA2 and related acetyltransferases - - - 0.00000000000000000000000000000000000000000000755 170.0
DYD1_k127_1574985_12 Domain of unknown function (DUF4936) - - - 0.00000000001114 70.0
DYD1_k127_1574985_2 Catalyzes the conversion of inosine 5'-phosphate (IMP) to xanthosine 5'-phosphate (XMP), the first committed and rate- limiting step in the de novo synthesis of guanine nucleotides, and therefore plays an important role in the regulation of cell growth K00088 - 1.1.1.205 1.096e-229 719.0
DYD1_k127_1574985_3 Aldehyde dehydrogenase K00135 - 1.2.1.16,1.2.1.20,1.2.1.79 1.377e-218 687.0
DYD1_k127_1574985_4 Catalyzes the interconversion of methylthioribose-1- phosphate (MTR-1-P) into methylthioribulose-1-phosphate (MTRu-1- P) K08963 - 5.3.1.23 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002973 436.0
DYD1_k127_1574985_5 KR domain K00059 - 1.1.1.100 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009333 345.0
DYD1_k127_1574985_6 Belongs to the GcvT family K06980 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001977 310.0
DYD1_k127_1574985_7 Transport and Golgi organisation 2 - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000001419 269.0
DYD1_k127_1574985_8 Transglutaminase/protease-like homologues - - - 0.000000000000000000000000000000000000000000000000000000000000000000000005298 264.0
DYD1_k127_1574985_9 L,D-transpeptidase catalytic domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000001702 245.0
DYD1_k127_1632475_0 AsmA family K07289 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002871 593.0
DYD1_k127_1632475_1 A G-specific K03575 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001205 386.0
DYD1_k127_1632475_10 PEGA domain - - - 0.0000000000000000000000000000000004851 148.0
DYD1_k127_1632475_11 Las17-binding protein actin regulator - - - 0.0000000000000000002735 94.0
DYD1_k127_1632475_12 - - - - 0.000000000008288 76.0
DYD1_k127_1632475_2 Displays ATPase and GTPase activities K06958 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003507 369.0
DYD1_k127_1632475_3 Thioredoxin-like K07152 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002694 356.0
DYD1_k127_1632475_4 AsmA family K07289,K07290 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009245 324.0
DYD1_k127_1632475_5 - - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000255 304.0
DYD1_k127_1632475_6 Protein of unknown function, DUF481 - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000002295 276.0
DYD1_k127_1632475_7 - - - - 0.00000000000000000000000000000000000000000000000000000000001296 212.0
DYD1_k127_1632475_8 ATP-dependent protease La (LON) substrate-binding domain K07157 - - 0.0000000000000000000000000000000000000000000000000000003465 201.0
DYD1_k127_1632475_9 Tetratricopeptide repeat - - - 0.0000000000000000000000000000000000000000000000006391 193.0
DYD1_k127_1760337_0 aldo keto reductase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001477 358.0
DYD1_k127_1760337_1 FMN-dependent dehydrogenase K00104 - 1.1.3.15 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001155 323.0
DYD1_k127_1760337_2 Tripartite tricarboxylate transporter family receptor - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006923 310.0
DYD1_k127_1760337_3 ABC transporter K02049 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001423 305.0
DYD1_k127_1760337_4 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000182 257.0
DYD1_k127_1760337_5 proline dipeptidase activity K01262 - 3.4.11.9 0.0000000000000000000000000000000000000000000000000000000000000002949 232.0
DYD1_k127_1760337_6 NMT1-like family K02051 - - 0.000000000000000000000000000000000000000000000000000000000005439 225.0
DYD1_k127_1760337_7 binding-protein-dependent transport systems inner membrane component K02050 - - 0.00000000000000000000000000000000000000000000000000000000008851 213.0
DYD1_k127_1760337_8 Binding-protein-dependent transport system inner membrane component K02050 - - 0.00000000000000000000000000000000000000000000000000003222 198.0
DYD1_k127_1760337_9 3-hydroxyisobutyrate dehydrogenase K00020 - 1.1.1.31 0.0000000000000000000001665 99.0
DYD1_k127_1760797_0 dehydrogenase, E1 component K00164 - 1.2.4.2 0.0 1281.0
DYD1_k127_1760797_1 Catalyzes the conversion of acetate into acetyl-CoA (AcCoA), an essential intermediate at the junction of anabolic and catabolic pathways. AcsA undergoes a two-step reaction. In the first half reaction, AcsA combines acetate with ATP to form acetyl-adenylate (AcAMP) intermediate. In the second half reaction, it can then transfer the acetyl group from AcAMP to the sulfhydryl group of CoA, forming the product AcCoA K01895 - 6.2.1.1 0.0 1230.0
DYD1_k127_1760797_10 Catalyzes the reversible oxidation of malate to oxaloacetate K00024 - 1.1.1.37 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000103 489.0
DYD1_k127_1760797_11 twitching motility protein K02670 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005866 472.0
DYD1_k127_1760797_12 succinate dehydrogenase fumarate reductase K00240 GO:0003674,GO:0003824,GO:0005488,GO:0005575,GO:0005623,GO:0005886,GO:0006091,GO:0008150,GO:0008152,GO:0009055,GO:0009060,GO:0009987,GO:0015980,GO:0016020,GO:0016491,GO:0022900,GO:0022904,GO:0044237,GO:0044464,GO:0045333,GO:0048037,GO:0051536,GO:0051537,GO:0051538,GO:0051539,GO:0051540,GO:0055114,GO:0071944 1.3.5.1,1.3.5.4 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006288 434.0
DYD1_k127_1760797_13 Belongs to the transferase hexapeptide repeat family K00674 - 2.3.1.117 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000337 424.0
DYD1_k127_1760797_14 PFAM AFG1-family ATPase K06916 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004446 415.0
DYD1_k127_1760797_15 PFAM Alcohol dehydrogenase GroES domain protein - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008862 408.0
DYD1_k127_1760797_16 COG0477 Permeases of the major facilitator superfamily - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004814 406.0
DYD1_k127_1760797_17 Required for chromosome condensation and partitioning K03529 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001011 359.0
DYD1_k127_1760797_18 May play a role in DNA repair. It seems to be involved in an RecBC-independent recombinational process of DNA repair. It may act with RecF and RecO K06187 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001933 327.0
DYD1_k127_1760797_19 Belongs to the pseudouridine synthase RsuA family K06178 - 5.4.99.22 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000516 306.0
DYD1_k127_1760797_2 Belongs to the FAD-dependent oxidoreductase 2 family. FRD SDH subfamily K00239 GO:0000104,GO:0000166,GO:0003674,GO:0003824,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005886,GO:0006082,GO:0006091,GO:0006099,GO:0006101,GO:0008150,GO:0008152,GO:0009055,GO:0009060,GO:0009061,GO:0009987,GO:0015980,GO:0016020,GO:0016491,GO:0016627,GO:0016999,GO:0017144,GO:0019752,GO:0022900,GO:0032991,GO:0036094,GO:0043167,GO:0043168,GO:0043436,GO:0044237,GO:0044238,GO:0044281,GO:0044424,GO:0044425,GO:0044459,GO:0044464,GO:0045273,GO:0045274,GO:0045281,GO:0045282,GO:0045333,GO:0048037,GO:0050660,GO:0050662,GO:0055114,GO:0070469,GO:0070470,GO:0071704,GO:0071944,GO:0072350,GO:0097159,GO:0098796,GO:0098797,GO:0098803,GO:1901265,GO:1901363,GO:1902494,GO:1990204 1.3.5.1,1.3.5.4 4.217e-294 910.0
DYD1_k127_1760797_20 Enoyl-(Acyl carrier protein) reductase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000004262 301.0
DYD1_k127_1760797_21 Belongs to the protein N5-glutamine methyltransferase family K07320 - 2.1.1.298 0.000000000000000000000000000000000000000000000000000000000000000000000000000000001677 283.0
DYD1_k127_1760797_22 Catalyzes the NADPH-dependent reduction of 7-cyano-7- deazaguanine (preQ0) to 7-aminomethyl-7-deazaguanine (preQ1) K06879,K09457 - 1.7.1.13 0.0000000000000000000000000000000000000000000000000000000000002859 213.0
DYD1_k127_1760797_23 Binds to DNA and alters its conformation. May be involved in regulation of gene expression, nucleoid organization and DNA protection K09747 - - 0.00000000000000000000000000000000000000000001374 164.0
DYD1_k127_1760797_24 Lipid A 3-O-deacylase (PagL) - - - 0.0000000000000000000000000000000000000843 151.0
DYD1_k127_1760797_25 COG2009 Succinate dehydrogenase fumarate reductase, cytochrome b subunit K00241 - - 0.000000000000000000000000000000000001831 144.0
DYD1_k127_1760797_26 Succinate dehydrogenase, hydrophobic K00242 - - 0.000000000000000000000000000001062 127.0
DYD1_k127_1760797_27 An FAD assembly protein, which accelerates covalent attachment of the cofactor into other proteins. Plays an essential role in the assembly of succinate dehydrogenase (SDH, respiratory complex II), an enzyme complex that is a component of both the tricarboxylic acid cycle and the electron transport chain, and which couples the oxidation of succinate to fumarate with the reduction of ubiquinone (coenzyme Q) to ubiquinol. Required for flavinylation (covalent attachment of FAD) of the flavoprotein subunit SdhA of SDH K00240,K09159 GO:0006082,GO:0006091,GO:0006099,GO:0006101,GO:0006105,GO:0006464,GO:0006807,GO:0008150,GO:0008152,GO:0009060,GO:0009987,GO:0015980,GO:0016043,GO:0016999,GO:0017013,GO:0017144,GO:0018065,GO:0018293,GO:0019538,GO:0019752,GO:0022607,GO:0034552,GO:0034622,GO:0036211,GO:0043170,GO:0043412,GO:0043436,GO:0043648,GO:0043933,GO:0044085,GO:0044237,GO:0044238,GO:0044260,GO:0044267,GO:0044281,GO:0045333,GO:0055114,GO:0065003,GO:0071704,GO:0071840,GO:0072350,GO:1901564 1.3.5.1,1.3.5.4 0.000000000000000003112 91.0
DYD1_k127_1760797_3 2-methylcitrate dehydratase K01720 - 4.2.1.79 2.009e-248 780.0
DYD1_k127_1760797_4 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain K00382 GO:0003674,GO:0003824,GO:0004148,GO:0005575,GO:0005622,GO:0005623,GO:0005634,GO:0005654,GO:0005737,GO:0005739,GO:0005759,GO:0006082,GO:0006084,GO:0006085,GO:0006086,GO:0006090,GO:0006139,GO:0006163,GO:0006164,GO:0006464,GO:0006637,GO:0006725,GO:0006732,GO:0006733,GO:0006753,GO:0006790,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009108,GO:0009117,GO:0009150,GO:0009152,GO:0009165,GO:0009259,GO:0009260,GO:0009987,GO:0016491,GO:0016651,GO:0016667,GO:0016668,GO:0018130,GO:0018335,GO:0019362,GO:0019438,GO:0019538,GO:0019637,GO:0019693,GO:0019752,GO:0031974,GO:0031981,GO:0032787,GO:0032991,GO:0033865,GO:0033866,GO:0033875,GO:0034030,GO:0034032,GO:0034033,GO:0034641,GO:0034654,GO:0035383,GO:0035384,GO:0036211,GO:0043170,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0043233,GO:0043412,GO:0043436,GO:0043543,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044272,GO:0044281,GO:0044422,GO:0044424,GO:0044428,GO:0044429,GO:0044444,GO:0044446,GO:0044464,GO:0045239,GO:0045240,GO:0045252,GO:0045254,GO:0046390,GO:0046483,GO:0046496,GO:0051186,GO:0051188,GO:0055086,GO:0055114,GO:0061732,GO:0070013,GO:0071616,GO:0071704,GO:0072521,GO:0072522,GO:0072524,GO:0090407,GO:0106077,GO:1901135,GO:1901137,GO:1901293,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576,GO:1902494,GO:1990204,GO:1990234 1.8.1.4 5.832e-227 712.0
DYD1_k127_1760797_5 Belongs to the citrate synthase family K01647 - 2.3.3.1 7.303e-210 659.0
DYD1_k127_1760797_6 Belongs to the citrate synthase family K01659 - 2.3.3.5 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003615 606.0
DYD1_k127_1760797_7 DNA polymerase III is a complex multichain enzyme responsible for most of the replicative synthesis in bacteria. This DNA polymerase also exhibits 3 to 5 exonuclease activity K02343 - 2.7.7.7 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001784 599.0
DYD1_k127_1760797_8 PFAM aminotransferase, class I K14267 - 2.6.1.17 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002352 556.0
DYD1_k127_1760797_9 The 2-oxoglutarate dehydrogenase complex catalyzes the overall conversion of 2-oxoglutarate to succinyl-CoA and CO(2) K00658 - 2.3.1.61 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003572 538.0
DYD1_k127_1782822_0 Histidine kinase-like ATPases - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005143 490.0
DYD1_k127_1782822_1 PFAM type II secretion system K02653 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001243 459.0
DYD1_k127_1782822_2 - - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000001111 271.0
DYD1_k127_1782822_3 - - - - 0.0000000000000000000000000000000000000000000000000000000000000002499 228.0
DYD1_k127_1782822_4 - - - - 0.000000000000000000000000000000000000000000000007236 187.0
DYD1_k127_1782822_5 - K01992 - - 0.00000000000000000000000000000000000000000000002137 183.0
DYD1_k127_1782822_6 general secretion pathway protein - - - 0.00000000000000000000000000000000000000001436 164.0
DYD1_k127_1782822_7 - - - - 0.000000000000000000000009133 111.0
DYD1_k127_1782822_8 Prokaryotic N-terminal methylation motif - - - 0.0000000000000000972 81.0
DYD1_k127_1791293_0 homoserine dehydrogenase K00003 - 1.1.1.3 2.875e-208 655.0
DYD1_k127_1791293_1 Aminotransferase K14261 - - 1.046e-204 642.0
DYD1_k127_1791293_2 membrane - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001444 569.0
DYD1_k127_1791293_3 Catalyzes the gamma-elimination of phosphate from L- phosphohomoserine and the beta-addition of water to produce L- threonine K01733 - 4.2.3.1 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001365 524.0
DYD1_k127_1791293_4 Belongs to the NadC ModD family K00767 - 2.4.2.19 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005191 336.0
DYD1_k127_1791293_7 Protein of unknown function (DUF498/DUF598) - - - 0.000000000000000000000000001829 121.0
DYD1_k127_1791293_8 NIPSNAP - - - 0.000000000000000000000002013 107.0
DYD1_k127_1791293_9 TIGRFAM PAS domain S-box, diguanylate cyclase (GGDEF) domain - - - 0.000000000000000009738 89.0
DYD1_k127_1804727_0 AcrB/AcrD/AcrF family K03296 - - 0.0 1412.0
DYD1_k127_1804727_1 Periplasmic binding protein domain K01999 - - 4.235e-209 659.0
DYD1_k127_1804727_10 Protein of unknown function, DUF488 - - - 0.00000000000000000000000000000000000000000000000000002531 192.0
DYD1_k127_1804727_11 HAD-hyrolase-like K07025 - - 0.0000000000000000000000000009515 118.0
DYD1_k127_1804727_2 Bacterial extracellular solute-binding proteins, family 5 Middle - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003607 477.0
DYD1_k127_1804727_3 Branched-chain amino acid transport system / permease component K01998 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000111 451.0
DYD1_k127_1804727_4 Branched-chain amino acid transport system / permease component K01998 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001354 455.0
DYD1_k127_1804727_5 Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family K02005 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002686 436.0
DYD1_k127_1804727_6 Branched-chain amino acid transport system / permease component K01997 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009448 376.0
DYD1_k127_1804727_7 Branched-chain amino acid transport system / permease component K01997 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009791 376.0
DYD1_k127_1804727_8 ABC transporter K01996 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002225 320.0
DYD1_k127_1804727_9 ATPases associated with a variety of cellular activities K01995 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001771 326.0
DYD1_k127_185096_0 ABC transporter transmembrane region K06147 - - 1.474e-239 755.0
DYD1_k127_185096_1 Catalyzes the condensation of iminoaspartate with dihydroxyacetone phosphate to form quinolinate K03517 - 2.5.1.72 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003982 607.0
DYD1_k127_185096_10 Two component transcriptional regulator, winged helix family K02483,K07666,K07774 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000003632 293.0
DYD1_k127_185096_11 PFAM NUDIX hydrolase K08310 - 3.6.1.67 0.0000000000000000000000000000000000000000000000000000000000299 210.0
DYD1_k127_185096_12 Ribonuclease K01167 - 3.1.27.3 0.00000000000000000000000000000001365 131.0
DYD1_k127_185096_13 Binds to Cpn60 in the presence of Mg-ATP and suppresses the ATPase activity of the latter K04078 - - 0.00000000000000000000000002725 108.0
DYD1_k127_185096_14 Barstar (barnase inhibitor) - - - 0.000000000000000000002507 98.0
DYD1_k127_185096_2 Aspartyl-tRNA synthetase with relaxed tRNA specificity since it is able to aspartylate not only its cognate tRNA(Asp) but also tRNA(Asn). Reaction proceeds in two steps L-aspartate is first activated by ATP to form Asp-AMP and then transferred to the acceptor end of tRNA(Asp Asn) K01876 - 6.1.1.12 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000496 574.0
DYD1_k127_185096_3 Catalyzes the phosphatidyl group transfer from one phosphatidylglycerol molecule to another to form cardiolipin (CL) (diphosphatidylglycerol) and glycerol K06131 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000123 447.0
DYD1_k127_185096_4 histidine kinase HAMP region domain protein K07649 - 2.7.13.3 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000703 378.0
DYD1_k127_185096_5 PFAM Endonuclease exonuclease phosphatase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001958 357.0
DYD1_k127_185096_6 Methyltransferase K18911 - 2.1.1.44 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002022 357.0
DYD1_k127_185096_7 major facilitator superfamily - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008587 312.0
DYD1_k127_185096_8 Alpha/beta hydrolase family K01055 - 3.1.1.24 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000003762 302.0
DYD1_k127_185096_9 Beta-lactamase enzyme family K07262 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000002228 300.0
DYD1_k127_1865523_0 CoA-binding domain protein K01905,K22224 - 6.2.1.13 4.418e-228 727.0
DYD1_k127_1865523_1 Major facilitator Superfamily - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009859 499.0
DYD1_k127_1865523_10 Carboxymuconolactone decarboxylase family K01607 - 4.1.1.44 0.000000000000000000000000573 108.0
DYD1_k127_1865523_2 Acyl-CoA dehydrogenase, C-terminal domain K06446 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001759 404.0
DYD1_k127_1865523_3 dienelactone hydrolase K01061 - 3.1.1.45 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001028 347.0
DYD1_k127_1865523_4 Haloacid dehalogenase-like hydrolase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002901 329.0
DYD1_k127_1865523_5 Tripartite tricarboxylate transporter family receptor - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000009693 258.0
DYD1_k127_1865523_6 - - - - 0.00000000000000000000000000000000000000000000000000000001163 203.0
DYD1_k127_1865523_8 COG1028 Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) K00046 - 1.1.1.69 0.000000000000000000000000000000000000000008273 158.0
DYD1_k127_1865523_9 Acetyltransferase (GNAT) family - - - 0.0000000000000000000000000000008207 139.0
DYD1_k127_1994885_0 Ribonuclease E/G family K08301 - - 5.637e-224 705.0
DYD1_k127_1994885_1 twitching motility protein K02669 - - 1.856e-196 615.0
DYD1_k127_1994885_2 twitching motility protein K02670 - - 6.858e-195 616.0
DYD1_k127_1994885_3 Catalyzes the reduction of 1-pyrroline-5-carboxylate (PCA) to L-proline K00286 - 1.5.1.2 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000005902 287.0
DYD1_k127_1994885_4 Pyridoxal 5'-phosphate (PLP)-binding protein, which is involved in PLP homeostasis K06997 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000006279 265.0
DYD1_k127_1994885_5 YGGT family K02221 - - 0.000000000000000000000000000000000000000000000000005138 188.0
DYD1_k127_1994885_6 Belongs to the UPF0235 family K09131 - - 0.0000000000000000004316 90.0
DYD1_k127_1994885_7 Maf-like protein K06287 - - 0.00000000000001496 74.0
DYD1_k127_2047237_0 Catalyzes the synthesis of the hydroxymethylpyrimidine phosphate (HMP-P) moiety of thiamine from aminoimidazole ribotide (AIR) in a radical S-adenosyl-L-methionine (SAM)-dependent reaction K03147 - 4.1.99.17 0.0 1075.0
DYD1_k127_2047237_1 Sigma factor PP2C-like phosphatases K07315 - 3.1.3.3 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005233 566.0
DYD1_k127_2047237_2 COG1235 Metal-dependent hydrolases of the beta-lactamase superfamily I - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000128 334.0
DYD1_k127_2047237_3 OmpA family - - - 0.0000000000000000000000000000000000000001281 161.0
DYD1_k127_2047237_4 FecR protein - - - 0.000000000000000000000000000000000004867 143.0
DYD1_k127_2047237_5 Histidine kinase-like ATPase domain - - - 0.000000000000000002798 91.0
DYD1_k127_2049645_0 PFAM TRAP C4-dicarboxylate transport system permease DctM subunit - - - 8.976e-194 614.0
DYD1_k127_2049645_1 Amidase K02433 - 6.3.5.6,6.3.5.7 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001919 528.0
DYD1_k127_2049645_10 Part of the tripartite ATP-independent periplasmic (TRAP) transport system - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004465 393.0
DYD1_k127_2049645_11 PFAM D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain, D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain K00015,K00090 - 1.1.1.215,1.1.1.26,1.1.1.79,1.1.1.81 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006474 370.0
DYD1_k127_2049645_12 Zinc-binding dehydrogenase K00344 - 1.6.5.5 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003745 330.0
DYD1_k127_2049645_13 AAA domain, putative AbiEii toxin, Type IV TA system K02065 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001075 332.0
DYD1_k127_2049645_14 Tripartite tricarboxylate transporter family receptor - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000003181 293.0
DYD1_k127_2049645_15 Zinc-binding dehydrogenase K00344 - 1.6.5.5 0.000000000000000000000000000000000000000000000000000000000000000000000000000000001886 304.0
DYD1_k127_2049645_16 Tripartite tricarboxylate transporter family receptor - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000008806 278.0
DYD1_k127_2049645_17 thiolester hydrolase activity K06889 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000003388 272.0
DYD1_k127_2049645_18 Tripartite ATP-independent periplasmic transporters, DctQ component - - - 0.000000000000000000000000000000000000000000000000000000000000000000000002933 248.0
DYD1_k127_2049645_19 MlaD protein K02067 - - 0.000000000000000000000000000000000000000000000000000000000000000001061 240.0
DYD1_k127_2049645_2 Oxidoreductase family, C-terminal alpha/beta domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003833 523.0
DYD1_k127_2049645_20 CBS domain - - - 0.00000000000000000000000000000000000000000000001277 176.0
DYD1_k127_2049645_21 HIT domain K02503 - - 0.00000000000000000000000000000000000000000000002251 172.0
DYD1_k127_2049645_23 Phasin protein - - - 0.000000000000000000000000000000000000000005365 160.0
DYD1_k127_2049645_24 ABC-type transport auxiliary lipoprotein component K18480 - - 0.000000000000000000000000000000000000443 149.0
DYD1_k127_2049645_25 Cupin 2, conserved barrel domain protein K00450,K01628 - 1.13.11.4,4.1.2.17 0.000000000000000000000000000000000006855 145.0
DYD1_k127_2049645_26 Carboxymuconolactone decarboxylase - - - 0.00000000000000000000000000000004457 132.0
DYD1_k127_2049645_27 protein possibly involved in aromatic compounds catabolism - - - 0.000000000000000000000001483 108.0
DYD1_k127_2049645_28 2-dehydrogenase K00010 - 1.1.1.18,1.1.1.369 0.00000000000000000000002195 112.0
DYD1_k127_2049645_29 Molybdopterin binding - - - 0.0009645 43.0
DYD1_k127_2049645_3 diguanylate cyclase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003527 541.0
DYD1_k127_2049645_4 L-carnitine dehydratase bile acid-inducible protein F K07749 - 2.8.3.16 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001469 494.0
DYD1_k127_2049645_5 Putative cyclase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001692 488.0
DYD1_k127_2049645_6 Part of the tripartite ATP-independent periplasmic (TRAP) transport system - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001556 473.0
DYD1_k127_2049645_7 Permease MlaE K02066 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006063 441.0
DYD1_k127_2049645_8 Creatinine amidohydrolase K01470 - 3.5.2.10 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006493 399.0
DYD1_k127_2049645_9 NHL repeat - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001279 396.0
DYD1_k127_2061970_0 Glycosyl hydrolase family 63 C-terminal domain - - - 0.0 1318.0
DYD1_k127_2061970_1 PFAM NADH Ubiquinone plastoquinone (complex I) - - - 2.481e-233 739.0
DYD1_k127_2061970_10 NADH dehydrogenase - - - 0.0000000000000000000000000000000000000000000000000000001806 207.0
DYD1_k127_2061970_11 Prokaryotic N-terminal methylation motif K02456 - - 0.0000000000000000000000000000000000000000001431 166.0
DYD1_k127_2061970_12 Belongs to the class-I pyridine nucleotide-disulfide oxidoreductase family - - - 0.0000000000000000000000000000000000000000002028 160.0
DYD1_k127_2061970_13 Binding-protein-dependent transport system inner membrane component K02011 - - 0.000000000000000000000000000000000001691 144.0
DYD1_k127_2061970_14 Predicted nucleotide-binding protein containing TIR-like domain - - - 0.0000000000000000000001853 102.0
DYD1_k127_2061970_15 Iron-binding zinc finger CDGSH type K05710 - - 0.00000000000000007727 90.0
DYD1_k127_2061970_16 Belongs to the TPP enzyme family K01652 - 2.2.1.6 0.00000000000001008 75.0
DYD1_k127_2061970_17 SH3 domain - - - 0.00005221 53.0
DYD1_k127_2061970_2 Chromate Ion Transporter K07240 - - 2.532e-218 685.0
DYD1_k127_2061970_3 Belongs to the class-I pyridine nucleotide-disulfide oxidoreductase family K00520,K21739 - 1.16.1.1 2.397e-208 656.0
DYD1_k127_2061970_4 diguanylate cyclase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001302 455.0
DYD1_k127_2061970_5 Chromate resistance exported protein - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000002283 294.0
DYD1_k127_2061970_6 Cache domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000008795 276.0
DYD1_k127_2061970_7 chromate transport protein K07240 - - 0.000000000000000000000000000000000000000000000000000000000000000000000004837 258.0
DYD1_k127_2061970_8 COG0656 Aldo keto reductases, related to diketogulonate reductase K06222 - 1.1.1.346 0.000000000000000000000000000000000000000000000000000000000000000002949 241.0
DYD1_k127_2061970_9 Catalyzes the cleavage of glutathione into 5-oxo-L- proline and a Cys-Gly dipeptide. Acts specifically on glutathione, but not on other gamma-glutamyl peptides K07232 - - 0.00000000000000000000000000000000000000000000000000000007058 208.0
DYD1_k127_2064085_0 TIGRFAM malate synthase A K01638 - 2.3.3.9 1.851e-258 806.0
DYD1_k127_2064085_1 Translation elongation factor K03833 - - 7.722e-195 627.0
DYD1_k127_2064085_10 Cold shock protein K03704 - - 0.00000000000000000000000000000000002018 136.0
DYD1_k127_2064085_11 Tripartite tricarboxylate transporter family receptor - - - 0.0000000000000000000000003675 108.0
DYD1_k127_2064085_12 OsmC-like protein - - - 0.00000000000002006 78.0
DYD1_k127_2064085_13 Involved in the modulation of the specificity of the ClpAP-mediated ATP-dependent protein degradation K06891 - - 0.000000000007652 66.0
DYD1_k127_2064085_14 Translation elongation factor K03833 GO:0000049,GO:0000166,GO:0001514,GO:0001882,GO:0001883,GO:0003674,GO:0003676,GO:0003723,GO:0003729,GO:0003824,GO:0003924,GO:0005488,GO:0005525,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006082,GO:0006412,GO:0006414,GO:0006417,GO:0006451,GO:0006518,GO:0006520,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009069,GO:0009889,GO:0009987,GO:0010467,GO:0010468,GO:0010556,GO:0010608,GO:0016259,GO:0016462,GO:0016787,GO:0016817,GO:0016818,GO:0017076,GO:0017111,GO:0019001,GO:0019003,GO:0019222,GO:0019538,GO:0019752,GO:0031323,GO:0031326,GO:0032268,GO:0032549,GO:0032550,GO:0032553,GO:0032555,GO:0032561,GO:0034248,GO:0034641,GO:0034645,GO:0035368,GO:0035639,GO:0036094,GO:0043043,GO:0043167,GO:0043168,GO:0043170,GO:0043436,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044281,GO:0044424,GO:0044464,GO:0050789,GO:0050794,GO:0051171,GO:0051246,GO:0060255,GO:0065007,GO:0071704,GO:0080090,GO:0097159,GO:0097367,GO:1901265,GO:1901363,GO:1901564,GO:1901566,GO:1901576,GO:1901605,GO:2000112 - 0.000007049 49.0
DYD1_k127_2064085_2 Catalyzes the 2-thiolation of uridine at the wobble position (U34) of tRNA, leading to the formation of s(2)U34 K00566 - 2.8.1.13 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003951 576.0
DYD1_k127_2064085_3 Pfam Sulfatase K01133 - 3.1.6.6 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004599 528.0
DYD1_k127_2064085_4 Converts seryl-tRNA(Sec) to selenocysteinyl-tRNA(Sec) required for selenoprotein biosynthesis K01042 - 2.9.1.1 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002675 510.0
DYD1_k127_2064085_5 Protein conserved in bacteria - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003285 334.0
DYD1_k127_2064085_6 Belongs to the class-II pyridine nucleotide-disulfide oxidoreductase family K00384 - 1.8.1.9 0.0000000000000000000000000000000000000000000000000000000000000000000000002457 261.0
DYD1_k127_2064085_7 protein conserved in bacteria K07795 - - 0.0000000000000000000000000000000000000000000000000000000000000000000007358 248.0
DYD1_k127_2064085_8 DinB superfamily - - - 0.000000000000000000000000000000000000000000000000001588 190.0
DYD1_k127_2068700_0 DegT/DnrJ/EryC1/StrS aminotransferase family K14287 - 2.6.1.88 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000191 472.0
DYD1_k127_2068700_1 Required for chromosome condensation and partitioning K03529 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004405 350.0
DYD1_k127_2068700_10 - - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000001187 277.0
DYD1_k127_2068700_11 KR domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000001858 269.0
DYD1_k127_2068700_12 Tripartite tricarboxylate transporter family receptor - - - 0.0000000000000000000000000000000000000000000000000000000000000000000005816 254.0
DYD1_k127_2068700_13 alpha beta - - - 0.0000000000000000000000000000000000000000000000000000000000000000007649 242.0
DYD1_k127_2068700_14 DNA ligase that catalyzes the formation of phosphodiester linkages between 5'-phosphoryl and 3'-hydroxyl groups in double-stranded DNA using NAD as a coenzyme and as the energy source for the reaction. It is essential for DNA replication and repair of damaged DNA K01972 - 6.5.1.2 0.00000000000000000000000000000000000000000000000000000000000002507 226.0
DYD1_k127_2068700_15 Belongs to the D-alanine--D-alanine ligase family K01921 - 6.3.2.4 0.00000000000000000000000000000000000000000000000959 184.0
DYD1_k127_2068700_16 - - - - 0.0000000000000000000000000000000000253 149.0
DYD1_k127_2068700_17 NIPSNAP - - - 0.00000000000000000000000000000000005057 136.0
DYD1_k127_2068700_18 ornithine cyclodeaminase K01750 - 4.3.1.12 0.000000000000000000000000000000009511 140.0
DYD1_k127_2068700_19 COG0526, thiol-disulfide isomerase and thioredoxins - - - 0.000000000000000000000000000003437 127.0
DYD1_k127_2068700_2 Aldo/keto reductase family - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002515 339.0
DYD1_k127_2068700_20 Catalyzes the isomerization between 2-isopropylmalate and 3-isopropylmalate, via the formation of 2-isopropylmaleate K01704 - 4.2.1.33,4.2.1.35 0.0000000000000000000001652 109.0
DYD1_k127_2068700_21 Essential cell division protein that stabilizes the FtsZ protofilaments by cross-linking them and that serves as a cytoplasmic membrane anchor for the Z ring. Also required for the recruitment to the septal ring of downstream cell division proteins K03528 - - 0.000000000000000008912 95.0
DYD1_k127_2068700_22 Glycine zipper 2TM domain - - - 0.0000979 51.0
DYD1_k127_2068700_23 Glycine zipper 2TM domain - - - 0.0001326 51.0
DYD1_k127_2068700_3 aldo keto reductase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009819 336.0
DYD1_k127_2068700_4 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain K00058 - 1.1.1.399,1.1.1.95 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001068 337.0
DYD1_k127_2068700_5 FMN-dependent dehydrogenase K00104 - 1.1.3.15 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000522 330.0
DYD1_k127_2068700_6 Acetyltransferase (GNAT) domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007778 317.0
DYD1_k127_2068700_7 Aconitase family (aconitate hydratase) K01703 - 4.2.1.33,4.2.1.35 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001614 319.0
DYD1_k127_2068700_8 proline dipeptidase activity K01262 - 3.4.11.9 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000002961 299.0
DYD1_k127_2068700_9 short-chain dehydrogenase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000007654 277.0
DYD1_k127_2087303_0 X-Pro dipeptidyl-peptidase C-terminal non-catalytic domain K06978 - - 9.193e-241 755.0
DYD1_k127_2087303_1 oxidoreductase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004051 473.0
DYD1_k127_2087303_2 Tripartite tricarboxylate transporter family receptor - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005341 314.0
DYD1_k127_2087303_3 Metallopeptidase family M24 - - - 0.00000000000000000000000000000000000000000000000000000000001289 219.0
DYD1_k127_2097188_0 PFAM FAD-dependent pyridine nucleotide-disulphide oxidoreductase - - - 0.0 1590.0
DYD1_k127_2097188_1 Catalyzes the ATP-dependent amination of UTP to CTP with either L-glutamine or ammonia as the source of nitrogen. Regulates intracellular CTP levels through interactions with the four ribonucleotide triphosphates K01937 GO:0001775,GO:0002376,GO:0003674,GO:0003824,GO:0003883,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006139,GO:0006213,GO:0006220,GO:0006221,GO:0006241,GO:0006725,GO:0006753,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0008283,GO:0009058,GO:0009116,GO:0009117,GO:0009119,GO:0009141,GO:0009142,GO:0009147,GO:0009148,GO:0009163,GO:0009165,GO:0009199,GO:0009201,GO:0009208,GO:0009209,GO:0009218,GO:0009220,GO:0009259,GO:0009260,GO:0009987,GO:0015949,GO:0016874,GO:0016879,GO:0018130,GO:0019438,GO:0019637,GO:0019693,GO:0032943,GO:0034404,GO:0034641,GO:0034654,GO:0042098,GO:0042100,GO:0042110,GO:0042113,GO:0042221,GO:0042455,GO:0042493,GO:0042802,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0044283,GO:0044424,GO:0044444,GO:0044464,GO:0045321,GO:0046036,GO:0046131,GO:0046132,GO:0046134,GO:0046390,GO:0046483,GO:0046649,GO:0046651,GO:0050896,GO:0055086,GO:0070661,GO:0071704,GO:0072527,GO:0072528,GO:0090407,GO:1901135,GO:1901137,GO:1901293,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576,GO:1901657,GO:1901659 6.3.4.2 1.382e-290 899.0
DYD1_k127_2097188_2 Catalyzes the reversible conversion of 2- phosphoglycerate into phosphoenolpyruvate. It is essential for the degradation of carbohydrates via glycolysis K01689 GO:0000015,GO:0000287,GO:0003674,GO:0003824,GO:0004634,GO:0005488,GO:0005515,GO:0005575,GO:0005576,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005856,GO:0005975,GO:0006082,GO:0006090,GO:0006091,GO:0006096,GO:0006139,GO:0006163,GO:0006164,GO:0006165,GO:0006725,GO:0006732,GO:0006733,GO:0006753,GO:0006754,GO:0006757,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0009056,GO:0009058,GO:0009108,GO:0009117,GO:0009123,GO:0009124,GO:0009126,GO:0009127,GO:0009132,GO:0009135,GO:0009141,GO:0009142,GO:0009144,GO:0009145,GO:0009150,GO:0009152,GO:0009156,GO:0009161,GO:0009165,GO:0009166,GO:0009167,GO:0009168,GO:0009179,GO:0009185,GO:0009199,GO:0009201,GO:0009205,GO:0009206,GO:0009259,GO:0009260,GO:0009986,GO:0009987,GO:0016052,GO:0016053,GO:0016310,GO:0016829,GO:0016835,GO:0016836,GO:0017144,GO:0018130,GO:0019359,GO:0019362,GO:0019363,GO:0019438,GO:0019439,GO:0019637,GO:0019693,GO:0019752,GO:0032787,GO:0032991,GO:0034404,GO:0034641,GO:0034654,GO:0034655,GO:0042802,GO:0042866,GO:0043167,GO:0043169,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043436,GO:0044237,GO:0044238,GO:0044248,GO:0044249,GO:0044270,GO:0044271,GO:0044281,GO:0044283,GO:0044424,GO:0044444,GO:0044445,GO:0044464,GO:0046031,GO:0046034,GO:0046390,GO:0046394,GO:0046434,GO:0046483,GO:0046496,GO:0046700,GO:0046872,GO:0046939,GO:0051186,GO:0051188,GO:0055086,GO:0071704,GO:0072330,GO:0072521,GO:0072522,GO:0072524,GO:0072525,GO:0090407,GO:1901135,GO:1901137,GO:1901292,GO:1901293,GO:1901360,GO:1901361,GO:1901362,GO:1901564,GO:1901566,GO:1901575,GO:1901576,GO:1902494 4.2.1.11 3.735e-220 689.0
DYD1_k127_2097188_3 Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family K00822,K00833 - 2.6.1.18,2.6.1.62 3.181e-205 647.0
DYD1_k127_2097188_4 Substrate binding domain of ABC-type glycine betaine transport system K05845,K05846 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009742 548.0
DYD1_k127_2097188_5 3-deoxy-D-manno-octulosonic acid 8-phosphate synthase K01627 - 2.5.1.55 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004287 448.0
DYD1_k127_2097188_6 Polysaccharide deacetylase K22278 - 3.5.1.104 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001048 403.0
DYD1_k127_2097188_7 Catalyzes the oxidation of 5,10- methylenetetrahydrofolate to 5,10-methenyltetrahydrofolate and then the hydrolysis of 5,10-methenyltetrahydrofolate to 10- formyltetrahydrofolate K01491 - 1.5.1.5,3.5.4.9 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001649 326.0
DYD1_k127_2097188_8 Essential cell division protein. May link together the upstream cell division proteins, which are predominantly cytoplasmic, with the downstream cell division proteins, which are predominantly periplasmic K05589 - - 0.000000000000000000000000004573 115.0
DYD1_k127_2098095_0 Prevents misfolding and promotes the refolding and proper assembly of unfolded polypeptides generated under stress conditions K04077 - - 7.029e-282 874.0
DYD1_k127_2098095_1 Aminotransferase class-V K00830 - 2.6.1.44,2.6.1.45,2.6.1.51 3.702e-201 638.0
DYD1_k127_2098095_10 Serine aminopeptidase, S33 - - - 0.00000000000000000000000000000000000000000000000000000004401 206.0
DYD1_k127_2098095_11 MlaC protein K07323 - - 0.0000000000000000000000000000000000000000000000000000006709 207.0
DYD1_k127_2098095_12 - - - - 0.00000000000000000000000000000000000000000000000242 181.0
DYD1_k127_2098095_13 Binds to Cpn60 in the presence of Mg-ATP and suppresses the ATPase activity of the latter K04078 - - 0.000000000000000000000000000000000000000000001247 167.0
DYD1_k127_2098095_14 Glycine zipper 2TM domain - - - 0.0000000000000000000000000000000000000000007724 164.0
DYD1_k127_2098095_15 signal transduction histidine kinase K07716 - 2.7.13.3 0.00000000000000000000000000000005607 133.0
DYD1_k127_2098095_16 - - - - 0.000000000000000000000133 98.0
DYD1_k127_2098095_17 Glycine zipper 2TM domain K04062 - - 0.0000000000000000000002328 98.0
DYD1_k127_2098095_18 Protein of unknown function (DUF3309) - - - 0.000000000000000000002201 94.0
DYD1_k127_2098095_19 - - - - 0.00000000000001758 76.0
DYD1_k127_2098095_2 PFAM fatty acid desaturase K00507 - 1.14.19.1 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001081 581.0
DYD1_k127_2098095_20 Transglycosylase associated protein - - - 0.000000000007552 68.0
DYD1_k127_2098095_21 Protein of unknown function (DUF3096) - - - 0.000000000008638 70.0
DYD1_k127_2098095_22 Collagen triple helix repeat (20 copies) - - - 0.00000006468 64.0
DYD1_k127_2098095_23 Glycine zipper 2TM domain - - - 0.0000148 54.0
DYD1_k127_2098095_24 Entericidin EcnA/B family - - - 0.00001771 48.0
DYD1_k127_2098095_3 Alcohol dehydrogenase GroES-like domain K13953 - 1.1.1.1 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002442 486.0
DYD1_k127_2098095_4 Putative S-adenosyl-L-methionine-dependent methyltransferase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002862 435.0
DYD1_k127_2098095_5 Catalyzes the ATP-dependent 2-thiolation of cytidine in position 32 of tRNA, to form 2-thiocytidine (s(2)C32). The sulfur atoms are provided by the cysteine cysteine desulfurase (IscS) system K14058 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000135 419.0
DYD1_k127_2098095_6 Peptidase family M48 - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001249 407.0
DYD1_k127_2098095_7 Methylenetetrahydrofolate reductase K00297 GO:0000166,GO:0003674,GO:0003824,GO:0004489,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006082,GO:0006575,GO:0006725,GO:0006730,GO:0006732,GO:0006760,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009108,GO:0009396,GO:0009987,GO:0016043,GO:0016053,GO:0016491,GO:0016645,GO:0016646,GO:0018130,GO:0019438,GO:0019752,GO:0022607,GO:0034641,GO:0036094,GO:0042398,GO:0042558,GO:0042559,GO:0043167,GO:0043168,GO:0043436,GO:0043603,GO:0043604,GO:0043933,GO:0044085,GO:0044237,GO:0044249,GO:0044271,GO:0044281,GO:0044283,GO:0044424,GO:0044444,GO:0044464,GO:0046394,GO:0046483,GO:0046653,GO:0046654,GO:0048037,GO:0050660,GO:0050662,GO:0051186,GO:0051188,GO:0051259,GO:0051260,GO:0051262,GO:0051289,GO:0055114,GO:0065003,GO:0071704,GO:0071840,GO:0071949,GO:0097159,GO:1901265,GO:1901360,GO:1901362,GO:1901363,GO:1901564,GO:1901566,GO:1901576 1.5.1.20 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001495 390.0
DYD1_k127_2098095_8 Short-chain dehydrogenase reductase SDR K00059,K03793 GO:0003674,GO:0003824,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006518,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0008667,GO:0009058,GO:0009237,GO:0009238,GO:0009239,GO:0009712,GO:0009713,GO:0009987,GO:0016043,GO:0016491,GO:0016627,GO:0016628,GO:0018130,GO:0018958,GO:0019184,GO:0019290,GO:0019438,GO:0019540,GO:0019748,GO:0022607,GO:0034641,GO:0042802,GO:0043043,GO:0043603,GO:0043604,GO:0043933,GO:0044085,GO:0044237,GO:0044249,GO:0044271,GO:0044424,GO:0044444,GO:0044464,GO:0044550,GO:0046189,GO:0046483,GO:0051186,GO:0051188,GO:0051259,GO:0051260,GO:0051262,GO:0051289,GO:0055114,GO:0065003,GO:0071704,GO:0071840,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576,GO:1901615,GO:1901617 1.1.1.100,1.5.1.33 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001589 341.0
DYD1_k127_2098095_9 Destroys radicals which are normally produced within the cells and which are toxic to biological systems K04564 - 1.15.1.1 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000001399 282.0
DYD1_k127_2102453_0 Tripartite tricarboxylate transporter TctA family - - - 4.024e-217 692.0
DYD1_k127_2102453_1 Carboxyl transferase domain K01966 - 2.1.3.15,6.4.1.3 1.019e-210 666.0
DYD1_k127_2102453_10 Mo-co oxidoreductase dimerisation domain K00387 - 1.8.3.1 0.0000002367 62.0
DYD1_k127_2102453_2 Glycerophosphoryl diester phosphodiesterase family K01126 - 3.1.4.46 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001938 378.0
DYD1_k127_2102453_3 Enoyl-CoA hydratase/isomerase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008293 321.0
DYD1_k127_2102453_4 Amidohydrolase family - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008513 306.0
DYD1_k127_2102453_5 Transcriptional regulator - - - 0.0000000000000000000000000000000000000000000000000000465 196.0
DYD1_k127_2102453_6 AraC-like ligand binding domain - - - 0.00000000000000000000000000000000000000000000025 171.0
DYD1_k127_2102453_7 Tripartite tricarboxylate transporter TctB family - - - 0.000000000000000000000000000000000000246 145.0
DYD1_k127_2102453_8 - - - - 0.00000000000000000000000000006029 132.0
DYD1_k127_2102453_9 Acetyl propionyl-CoA carboxylase alpha subunit K02160 - - 0.00000000000000001564 85.0
DYD1_k127_2134361_0 In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity K02335 - 2.7.7.7 0.0 1165.0
DYD1_k127_2134361_1 Catalyzes the radical-mediated insertion of two sulfur atoms into the C-6 and C-8 positions of the octanoyl moiety bound to the lipoyl domains of lipoate-dependent enzymes, thereby converting the octanoylated domains into lipoylated derivatives K03644 - 2.8.1.8 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007589 411.0
DYD1_k127_2134361_2 Belongs to the pseudomonas-type ThrB family K02204 - 2.7.1.39 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000008866 299.0
DYD1_k127_2134361_3 Protein of unknown function (DUF4197) - - - 0.000000000000000000000000000000000000000000000000000000000000000000000008724 250.0
DYD1_k127_2134361_4 Protein of unknown function (DUF2782) - - - 0.0000000000000000000000000000113 133.0
DYD1_k127_2135268_0 amino acids such as threonine, to avoid such errors, it has a posttransfer editing activity that hydrolyzes mischarged Thr-tRNA(Val) in a tRNA-dependent manner K01873 - 6.1.1.9 0.0 1156.0
DYD1_k127_2135268_1 Radical SAM K01012 - 2.8.1.6 8.397e-196 615.0
DYD1_k127_2135268_10 - - - - 0.000000000000000000000000000000000000000000007686 173.0
DYD1_k127_2135268_11 - - - - 0.000000000000000000000000000000000000001579 150.0
DYD1_k127_2135268_12 - - - - 0.00000000000000000000000000000000003095 138.0
DYD1_k127_2135268_13 - - - - 0.0000000000000000000000000000000005277 134.0
DYD1_k127_2135268_14 - - - - 0.00000000000000000000000523 113.0
DYD1_k127_2135268_2 Cysteine-rich domain K03389 - 1.8.7.3,1.8.98.4,1.8.98.5,1.8.98.6 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007638 544.0
DYD1_k127_2135268_3 SMART Elongator protein 3 MiaB NifB K09711 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001834 503.0
DYD1_k127_2135268_4 lipoate-protein ligase A K03800 - 6.3.1.20 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008897 475.0
DYD1_k127_2135268_5 geranylgeranyl reductase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006966 398.0
DYD1_k127_2135268_6 4Fe-4S dicluster domain K03390 - 1.8.7.3,1.8.98.4,1.8.98.5,1.8.98.6 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005877 335.0
DYD1_k127_2135268_7 Domain of unknown function (DUF4126) - - - 0.0000000000000000000000000000000000000000000000000000000003021 208.0
DYD1_k127_2135268_8 The glycine cleavage system catalyzes the degradation of glycine. The H protein shuttles the methylamine group of glycine from the P protein to the T protein K02437 - - 0.0000000000000000000000000000000000000000000000000000000003747 206.0
DYD1_k127_2135268_9 Haem-degrading - - - 0.00000000000000000000000000000000000000000000000007729 190.0
DYD1_k127_2174647_0 Catalyzes the attachment of tyrosine to tRNA(Tyr) in a two-step reaction tyrosine is first activated by ATP to form Tyr- AMP and then transferred to the acceptor end of tRNA(Tyr) K01866 - 6.1.1.1 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001052 602.0
DYD1_k127_2174647_1 Catalyzes the NADPH-dependent reduction of N-acetyl-5- glutamyl phosphate to yield N-acetyl-L-glutamate 5-semialdehyde K00145 - 1.2.1.38 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002553 548.0
DYD1_k127_2174647_10 Polymer-forming cytoskeletal - - - 0.000000000000000000000000000000000000000000000004543 175.0
DYD1_k127_2174647_11 TPM domain - - - 0.00000000000000000000000000001643 127.0
DYD1_k127_2174647_2 peptidase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004938 443.0
DYD1_k127_2174647_3 Catalyzes the specific phosphorylation of 1,6-anhydro-N- acetylmuramic acid (anhMurNAc) with the simultaneous cleavage of the 1,6-anhydro ring, generating MurNAc-6-P. Is required for the utilization of anhMurNAc either imported from the medium or derived from its own cell wall murein, and thus plays a role in cell wall recycling K09001 - 2.7.1.170 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006742 421.0
DYD1_k127_2174647_4 TPM domain K06872 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003308 346.0
DYD1_k127_2174647_5 Belongs to the selenophosphate synthase 1 family. Class I subfamily K01008 - 2.7.9.3 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001492 331.0
DYD1_k127_2174647_6 Helix-turn-helix XRE-family like proteins - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000009625 256.0
DYD1_k127_2174647_7 Involved in the biosynthesis of lipid A, a phosphorylated glycolipid that anchors the lipopolysaccharide to the outer membrane of the cell K00677 - 2.3.1.129 0.0000000000000000000000000000000000000000000000000000000000000001657 231.0
DYD1_k127_2174647_8 - - - - 0.00000000000000000000000000000000000000000000000000000005487 204.0
DYD1_k127_2174647_9 Required for insertion of 4Fe-4S clusters K15724 - - 0.0000000000000000000000000000000000000000000000000000005757 195.0
DYD1_k127_2174750_0 Belongs to the sodium solute symporter (SSF) (TC 2.A.21) family K14392 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000026 601.0
DYD1_k127_2174750_1 Belongs to the methyltransferase superfamily K07444 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002994 470.0
DYD1_k127_2174750_10 VanZ like family - - - 0.00000000000000000000000000000000000000000000000000000006222 211.0
DYD1_k127_2174750_11 ferredoxin - - - 0.0000000000000000000000000000000000000000000000002121 179.0
DYD1_k127_2174750_12 MazG-like family - - - 0.00000000000000000000000000000000001638 139.0
DYD1_k127_2174750_15 DinB superfamily - - - 0.00000000000000000000005151 98.0
DYD1_k127_2174750_16 - - - - 0.000000005688 62.0
DYD1_k127_2174750_2 Part of the ABC transporter complex NodIJ involved in the export of the nodulation factors (Nod factors), the bacterial signal molecules that induce symbiosis and subsequent nodulation induction. Nod factors are LCO (lipo-chitin oligosaccharide), a modified beta-1,4-linked N-acetylglucosamine oligosaccharide. This subunit is responsible for energy coupling to the transport system K01990,K09695 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003537 441.0
DYD1_k127_2174750_3 DinB superfamily - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005352 443.0
DYD1_k127_2174750_4 single-stranded DNA 5'-3' exodeoxyribonuclease activity - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002673 364.0
DYD1_k127_2174750_5 ABC-2 type transporter K09694 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003712 341.0
DYD1_k127_2174750_6 Is probably a protein kinase regulator of UbiI activity which is involved in aerobic coenzyme Q (ubiquinone) biosynthesis K03688 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002463 316.0
DYD1_k127_2174750_7 Domain of unknown function (DUF2437) - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000001417 291.0
DYD1_k127_2174750_8 Uncharacterised protein family (UPF0093) K08973 - - 0.000000000000000000000000000000000000000000000000000000000000000000002246 237.0
DYD1_k127_2174750_9 hydrolase of the alpha beta superfamily K07018 - - 0.0000000000000000000000000000000000000000000000000000000000000000002655 235.0
DYD1_k127_2228504_0 Gamma-glutamyltranspeptidase - - - 6.296e-231 728.0
DYD1_k127_2228504_1 Prolyl oligopeptidase family K06889 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004267 357.0
DYD1_k127_2228504_2 Endoribonuclease L-PSP - - - 0.0000000000000000000000000000000002623 145.0
DYD1_k127_2228504_3 Histidine kinase - - - 0.000000000000005016 84.0
DYD1_k127_2234113_0 Phosphoribosylformylglycinamidine synthase involved in the purines biosynthetic pathway. Catalyzes the ATP-dependent conversion of formylglycinamide ribonucleotide (FGAR) and glutamine to yield formylglycinamidine ribonucleotide (FGAM) and glutamate K01952 GO:0000166,GO:0000287,GO:0003674,GO:0003824,GO:0004642,GO:0005488,GO:0005524,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006139,GO:0006163,GO:0006164,GO:0006725,GO:0006753,GO:0006793,GO:0006796,GO:0006807,GO:0008144,GO:0008150,GO:0008152,GO:0009058,GO:0009117,GO:0009165,GO:0009987,GO:0016874,GO:0016879,GO:0016884,GO:0017076,GO:0018130,GO:0019438,GO:0019637,GO:0030554,GO:0032553,GO:0032555,GO:0032559,GO:0034641,GO:0034654,GO:0035639,GO:0036094,GO:0043167,GO:0043168,GO:0043169,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0044424,GO:0044464,GO:0046483,GO:0046872,GO:0055086,GO:0071704,GO:0072521,GO:0072522,GO:0090407,GO:0097159,GO:0097367,GO:1901265,GO:1901293,GO:1901360,GO:1901362,GO:1901363,GO:1901564,GO:1901566,GO:1901576 6.3.5.3 0.0 1836.0
DYD1_k127_2234113_1 Molybdopterin oxidoreductase Fe4S4 domain K00123 - 1.17.1.9 0.0 1138.0
DYD1_k127_2234113_10 PFAM binding-protein-dependent transport systems inner membrane component K05773 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003158 325.0
DYD1_k127_2234113_11 ABC transporter K02018 GO:0005575,GO:0005623,GO:0005886,GO:0005887,GO:0016020,GO:0016021,GO:0031224,GO:0031226,GO:0044425,GO:0044459,GO:0044464,GO:0071944 - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000003489 293.0
DYD1_k127_2234113_12 ABC transporter - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000008505 284.0
DYD1_k127_2234113_13 COG2005 N-terminal domain of molybdenum-binding protein - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000009903 272.0
DYD1_k127_2234113_14 ABC transporter, periplasmic molybdate-binding protein K02020 GO:0003674,GO:0003824,GO:0005215,GO:0005488,GO:0005575,GO:0005623,GO:0006810,GO:0006811,GO:0006820,GO:0008150,GO:0008509,GO:0015075,GO:0015098,GO:0015103,GO:0015318,GO:0015399,GO:0015405,GO:0015412,GO:0015689,GO:0015698,GO:0016462,GO:0016787,GO:0016817,GO:0016818,GO:0016887,GO:0017111,GO:0022804,GO:0022857,GO:0030151,GO:0030288,GO:0030313,GO:0030973,GO:0031975,GO:0034220,GO:0042597,GO:0042623,GO:0042626,GO:0043167,GO:0043168,GO:0043169,GO:0043225,GO:0043492,GO:0044464,GO:0046872,GO:0046914,GO:0051179,GO:0051234,GO:0055085,GO:0098656,GO:0099133,GO:1901359 - 0.0000000000000000000000000000000000000000000000000000000000000000000000003076 255.0
DYD1_k127_2234113_15 MoaE protein K03635 - 2.8.1.12 0.000000000000000000000000000000000000000000000000000000000000000007938 227.0
DYD1_k127_2234113_16 molybdopterin-guanine dinucleotide biosynthesis protein K03753 - - 0.0000000000000000000000000000000000000000000000000000000000000004601 224.0
DYD1_k127_2234113_17 Important for reducing fluoride concentration in the cell, thus reducing its toxicity K06199 - - 0.000000000000000000000000000000000000000003119 158.0
DYD1_k127_2234113_18 Uncharacterized ACR, COG1993 - - - 0.00000000000000000000000000002471 119.0
DYD1_k127_2234113_19 Bacterial regulatory helix-turn-helix protein, lysR family K02019 - - 0.000000000000000000000000002273 115.0
DYD1_k127_2234113_2 Catalyzes the reversible hydration of fumarate to (S)- malate K01676 - 4.2.1.2 5.568e-244 761.0
DYD1_k127_2234113_20 Involved in sulfur transfer in the conversion of molybdopterin precursor Z to molybdopterin K03636 - - 0.00000000000000000000002393 102.0
DYD1_k127_2234113_21 PFAM TOBE domain protein - - - 0.000000000000000002097 88.0
DYD1_k127_2234113_22 - - - - 0.0000000000000003185 87.0
DYD1_k127_2234113_3 PFAM MoeA domain protein domain I and II K03750 - 2.10.1.1 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009452 534.0
DYD1_k127_2234113_4 Bifunctional enzyme that catalyzes the epimerization of the S- and R-forms of NAD(P)HX and the dehydration of the S-form of NAD(P)HX at the expense of ADP, which is converted to AMP. This allows the repair of both epimers of NAD(P)HX, a damaged form of NAD(P)H that is a result of enzymatic or heat-dependent hydration K17758 - 4.2.1.136 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000368 511.0
DYD1_k127_2234113_5 Bacterial extracellular solute-binding protein K05772 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001191 410.0
DYD1_k127_2234113_6 4Fe-4S ferredoxin, iron-sulfur binding K00124 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002375 399.0
DYD1_k127_2234113_7 Part of the ABC transporter complex ModABC involved in molybdenum import. Responsible for energy coupling to the transport system K02017 - 3.6.3.29 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009448 371.0
DYD1_k127_2234113_8 Molybdate transporter of MFS superfamily - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005855 363.0
DYD1_k127_2234113_9 UbiA prenyltransferase family K02548 - 2.5.1.74 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001553 347.0
DYD1_k127_2298456_0 Cell wall formation. Synthesis of cross-linked peptidoglycan from the lipid intermediates. The enzyme has a penicillin-insensitive transglycosylase N-terminal domain (formation of linear glycan strands) and a penicillin-sensitive transpeptidase C-terminal domain (cross-linking of the peptide subunits) K05365,K05366 - 2.4.1.129,3.4.16.4 9.805e-269 848.0
DYD1_k127_2298456_1 Predicted membrane protein (DUF2339) - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005165 442.0
DYD1_k127_2298456_10 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily K07032 - - 0.00000000000000000000000000000000000000000000000000000000000000005783 225.0
DYD1_k127_2298456_11 FAD binding domain - - - 0.0000000000000000000000000000000000000002471 152.0
DYD1_k127_2298456_12 glutathione S-transferase K00799 - 2.5.1.18 0.000000000000000000000000000000000002603 147.0
DYD1_k127_2298456_13 Tetratricopeptide repeat - - - 0.000000000000000000000000000001341 126.0
DYD1_k127_2298456_14 Rieske-like [2Fe-2S] domain K05710 - - 0.000000000000000000000000598 108.0
DYD1_k127_2298456_16 Domain of unknown function (DUF4168) - - - 0.00007521 51.0
DYD1_k127_2298456_17 Catalyzes the reversible phosphatidyl group transfer from one phosphatidylglycerol molecule to another to form cardiolipin (CL) (diphosphatidylglycerol) and glycerol K06131 - - 0.0007477 48.0
DYD1_k127_2298456_2 Glutathione synthase Ribosomal protein S6 modification enzyme (Glutaminyl transferase) - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002474 422.0
DYD1_k127_2298456_3 serine-type endopeptidase activity - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005904 385.0
DYD1_k127_2298456_4 transport systems K02033 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001228 352.0
DYD1_k127_2298456_5 mechanosensitive ion channel - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005047 327.0
DYD1_k127_2298456_6 Binding-protein-dependent transport system inner membrane component K02034 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007011 308.0
DYD1_k127_2298456_7 Belongs to the ABC transporter superfamily K02031,K15583 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000001713 284.0
DYD1_k127_2298456_8 Tripartite tricarboxylate transporter family receptor - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000006137 269.0
DYD1_k127_2298456_9 dipeptide transport K02035 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000007817 271.0
DYD1_k127_2385539_0 Methionine synthase K00548 - 2.1.1.13 5.197e-272 847.0
DYD1_k127_2385539_1 Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain K07303 - 1.3.99.16 1.576e-241 766.0
DYD1_k127_2385539_10 Ribosomal protein L11 methyltransferase (PrmA) - - - 0.000000000000000000000000000000000000000000000000000000000001471 215.0
DYD1_k127_2385539_11 CAAX amino Terminal protease family protein K07052 - - 0.00000000000000000000000000000000000000000000000000000285 201.0
DYD1_k127_2385539_12 - - - - 0.0000000000000000000000000000000000000000000000000004135 191.0
DYD1_k127_2385539_13 Cytochrome c K17223 - - 0.0000000000000000000000000000000000007773 152.0
DYD1_k127_2385539_14 - - - - 0.000000000000000004034 91.0
DYD1_k127_2385539_2 ribonuclease II K01147 - 3.1.13.1 4.936e-222 704.0
DYD1_k127_2385539_3 Reutilizes the intact tripeptide L-alanyl-gamma-D- glutamyl-meso-diaminopimelate by linking it to UDP-N- acetylmuramate K02558 - 6.3.2.45 1.454e-200 634.0
DYD1_k127_2385539_4 COG0154 Asp-tRNAAsn Glu-tRNAGln amidotransferase A subunit and related amidases K01426 - 3.5.1.4 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007104 447.0
DYD1_k127_2385539_5 Involved in the biosynthesis of the chorismate, which leads to the biosynthesis of aromatic amino acids. Catalyzes the reversible NADPH linked reduction of 3-dehydroshikimate (DHSA) to yield shikimate (SA) K00014 - 1.1.1.25 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001957 309.0
DYD1_k127_2385539_6 TIGRFAM TonB family protein K03832 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000001058 283.0
DYD1_k127_2385539_7 Peptidoglycan polymerase that catalyzes glycan chain elongation from lipid-linked precursors K03814 GO:0000270,GO:0003674,GO:0003824,GO:0005575,GO:0005623,GO:0005886,GO:0006022,GO:0006023,GO:0006024,GO:0006807,GO:0008150,GO:0008152,GO:0008955,GO:0009058,GO:0009059,GO:0009252,GO:0009273,GO:0009987,GO:0016020,GO:0016740,GO:0016757,GO:0016758,GO:0030203,GO:0034645,GO:0042546,GO:0043164,GO:0043170,GO:0044036,GO:0044038,GO:0044085,GO:0044237,GO:0044249,GO:0044260,GO:0044464,GO:0070589,GO:0071554,GO:0071704,GO:0071840,GO:0071944,GO:1901135,GO:1901137,GO:1901564,GO:1901566,GO:1901576 2.4.1.129 0.000000000000000000000000000000000000000000000000000000000000000000000000000000003994 280.0
DYD1_k127_2385539_8 [2Fe-2S] binding domain K07302 - 1.3.99.16 0.00000000000000000000000000000000000000000000000000000000000000000000000007469 250.0
DYD1_k127_2385539_9 esterase K07000 - - 0.00000000000000000000000000000000000000000000000000000000000001526 221.0
DYD1_k127_24699_0 - - - - 0.000000000000000000000000000000000000000000000000000000000003675 219.0
DYD1_k127_24699_1 Belongs to the sigma-70 factor family. ECF subfamily K03088 - - 0.000000000000000000000000000000000000000000000000003399 188.0
DYD1_k127_24699_2 Cyclophilin-like K09143 - - 0.00000000000000000000000000000000000000000003628 166.0
DYD1_k127_24699_3 PFAM Lytic transglycosylase catalytic - - - 0.0000000000000000000000000000000000007469 149.0
DYD1_k127_24699_4 - - - - 0.000000000000008309 80.0
DYD1_k127_24699_5 - - - - 0.00000000000003529 82.0
DYD1_k127_24699_6 ACT domain protein K00003,K00058,K01754,K04767 - 1.1.1.3,1.1.1.399,1.1.1.95,4.3.1.19 0.000000000002625 74.0
DYD1_k127_24699_7 Oxidoreductase-like protein, N-terminal - - - 0.00000002322 58.0
DYD1_k127_24699_8 Elongation factor G, domain IV K02355 - - 0.0000007245 51.0
DYD1_k127_2492181_0 repeat protein - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007117 486.0
DYD1_k127_2492181_1 Response regulator of the LytR AlgR family K02477 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000004123 269.0
DYD1_k127_2492181_2 Histidine kinase - - - 0.0000000000000000000000000000000000000000000000000000000309 210.0
DYD1_k127_2492181_3 - - - - 0.000000000000000000000000000000000004171 143.0
DYD1_k127_2492181_4 Belongs to the IlvD Edd family - - - 0.00000000000000000000000000000000007449 135.0
DYD1_k127_2492181_5 Cupin 2, conserved barrel domain protein K21700 - - 0.0000000000000000000000007891 109.0
DYD1_k127_2492181_6 aconitate hydratase - - - 0.0000000108 56.0
DYD1_k127_2492181_7 Histidine kinase - - - 0.00001237 55.0
DYD1_k127_2508907_0 aldehyde-lyase activity K01621 - 4.1.2.22,4.1.2.9 0.0 1450.0
DYD1_k127_2508907_1 TIGRFAM transporter, hydrophobe amphiphile efflux-1 (HAE1) family K03296,K18138 - - 0.0 1259.0
DYD1_k127_2508907_10 DNA-dependent ATPase involved in processing of recombination intermediates, plays a role in repairing DNA breaks. Stimulates the branch migration of RecA-mediated strand transfer reactions, allowing the 3' invading strand to extend heteroduplex DNA faster. Binds ssDNA in the presence of ADP but not other nucleotides, has ATPase activity that is stimulated by ssDNA and various branched DNA structures, but inhibited by SSB. Does not have RecA's homology-searching function K04485 - - 3.153e-226 707.0
DYD1_k127_2508907_11 Fumarase C C-terminus K01744 - 4.3.1.1 3.225e-221 694.0
DYD1_k127_2508907_12 Bacterial transcriptional activator domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003053 617.0
DYD1_k127_2508907_13 PFAM Major facilitator superfamily - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001346 550.0
DYD1_k127_2508907_14 TIGRFAM RND efflux system, outer membrane lipoprotein, NodT K18139 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003686 539.0
DYD1_k127_2508907_15 acyl-CoA transferases carnitine dehydratase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000867 497.0
DYD1_k127_2508907_16 mannitol 2-dehydrogenase activity K11690 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003164 494.0
DYD1_k127_2508907_17 Protein of unknown function (DUF1800) - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003541 485.0
DYD1_k127_2508907_18 Twin-arginine translocation pathway signal sequence - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009717 456.0
DYD1_k127_2508907_19 NADPH-dependent FMN reductase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004976 436.0
DYD1_k127_2508907_2 AMP-dependent synthetase - - - 0.0 1092.0
DYD1_k127_2508907_20 KR domain K00034 - 1.1.1.47 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001273 430.0
DYD1_k127_2508907_21 Catalyzes the interconversion of L-alanine and D- alanine. May also act on other amino acids K01775 - 5.1.1.1 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003679 433.0
DYD1_k127_2508907_22 ATPase associated with various cellular activities, AAA_5 K04748 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009493 422.0
DYD1_k127_2508907_23 Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family K03585 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001235 417.0
DYD1_k127_2508907_24 electron transfer flavoprotein, alpha subunit K03522 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003998 410.0
DYD1_k127_2508907_25 Transcriptional regulator - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005242 405.0
DYD1_k127_2508907_26 2Fe-2S iron-sulfur cluster binding domain K00245 - 1.3.5.4 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009589 391.0
DYD1_k127_2508907_27 Bacterial extracellular solute-binding protein, family 7 - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004603 370.0
DYD1_k127_2508907_28 COG0745 Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain K02483,K07659 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002989 362.0
DYD1_k127_2508907_29 Electron transfer flavoprotein K03521 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005888 361.0
DYD1_k127_2508907_3 Glycosyl hydrolase family 65, C-terminal domain K01838,K05342 - 2.4.1.64,5.4.2.6 0.0 1011.0
DYD1_k127_2508907_30 TIGRFAM HAD-superfamily hydrolase, subfamily IA, variant 3 - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000365 355.0
DYD1_k127_2508907_31 LemA family K03744 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001655 321.0
DYD1_k127_2508907_32 40-residue YVTN family beta-propeller repeat - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006178 324.0
DYD1_k127_2508907_33 TIGRFAM Phage SPO1 DNA polymerase-related protein K21929 - 3.2.2.27 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005846 311.0
DYD1_k127_2508907_34 GMP synthase (glutamine-hydrolyzing) activity - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000002581 300.0
DYD1_k127_2508907_35 formate dehydrogenase K00127 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000001578 292.0
DYD1_k127_2508907_36 TRAP transporter T-component - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000009271 289.0
DYD1_k127_2508907_37 Peptidase M22 glycoprotease K14742 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000003401 270.0
DYD1_k127_2508907_38 - - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000005646 258.0
DYD1_k127_2508907_39 Patatin-like phospholipase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000568 253.0
DYD1_k127_2508907_4 Cytochrome c554 and c-prime - - - 1.618e-313 979.0
DYD1_k127_2508907_40 PAP2 superfamily - - - 0.000000000000000000000000000000000000000000000000000000000000000000001395 241.0
DYD1_k127_2508907_41 Belongs to the HpcH HpaI aldolase family - - - 0.0000000000000000000000000000000000000000000000000000000000000000001708 239.0
DYD1_k127_2508907_42 Seems to be involved in the anchoring of the catalytic components of the fumarate reductase complex to the cytoplasmic membrane K00247 - - 0.000000000000000000000000000000000000000009226 163.0
DYD1_k127_2508907_43 Acetyltransferase (GNAT) domain K03789 - 2.3.1.128 0.0000000000000000000000000000000000000001672 157.0
DYD1_k127_2508907_44 Chalcone isomerase-like - - - 0.000000000000000000000000000000000001812 146.0
DYD1_k127_2508907_45 Serine/threonine phosphatases, family 2C, catalytic domain K20074 - 3.1.3.16 0.000000000000000000000000000000000002503 150.0
DYD1_k127_2508907_46 long-chain fatty acid transport protein - - - 0.0000000000000000000000000000000003818 138.0
DYD1_k127_2508907_47 - - - - 0.000000000000000000000000000000000415 135.0
DYD1_k127_2508907_48 Endoribonuclease L-PSP - - - 0.000000000000000000000000000000004329 134.0
DYD1_k127_2508907_49 Fumarate reductase subunit C K00246 - - 0.000000000000000000000000000000005766 132.0
DYD1_k127_2508907_5 Fumarate reductase flavoprotein C-term K00244 - 1.3.5.4 9.251e-280 870.0
DYD1_k127_2508907_50 Las17-binding protein actin regulator - - - 0.00000000000000000000000000185 119.0
DYD1_k127_2508907_51 - - - - 0.0000000000000000000002687 106.0
DYD1_k127_2508907_52 - - - - 0.0000000000000000000009293 102.0
DYD1_k127_2508907_53 - - - - 0.000000000000000000002045 100.0
DYD1_k127_2508907_54 - - - - 0.00000000000000000004235 94.0
DYD1_k127_2508907_55 META domain K09914 - - 0.000000000000001411 82.0
DYD1_k127_2508907_56 protein involved in outer membrane biogenesis K07289,K07290 - - 0.000000000001268 83.0
DYD1_k127_2508907_57 Has lipid A 3-O-deacylase activity. Hydrolyzes the ester bond at the 3 position of lipid A, a bioactive component of lipopolysaccharide (LPS), thereby releasing the primary fatty acyl moiety - - - 0.000000000008457 69.0
DYD1_k127_2508907_58 EF-hand domain pair - - - 0.000000005908 64.0
DYD1_k127_2508907_59 - - - - 0.00000001712 61.0
DYD1_k127_2508907_6 Patatin-like phospholipase K07001 - - 7.222e-264 833.0
DYD1_k127_2508907_60 protein involved in outer membrane biogenesis K07289 - - 0.00000004386 68.0
DYD1_k127_2508907_61 DNA-sulfur modification-associated - - - 0.00000009705 64.0
DYD1_k127_2508907_62 Histidine kinase K07638 - 2.7.13.3 0.0003365 45.0
DYD1_k127_2508907_7 von Willebrand factor (vWF) type A domain - - - 4.368e-237 758.0
DYD1_k127_2508907_8 Glycosyl hydrolases family 15 - - - 1.3e-233 738.0
DYD1_k127_2508907_9 Acyl-CoA dehydrogenase N terminal K20035 - - 6.147e-232 731.0
DYD1_k127_2517092_0 3-hydroxyacyl-CoA dehydrogenase K07516 - 1.1.1.35 0.0 1146.0
DYD1_k127_2517092_1 acyl-CoA dehydrogenase K06445 - - 1.464e-315 986.0
DYD1_k127_2517092_2 AMP-dependent synthetase K01897 - 6.2.1.3 5.359e-231 729.0
DYD1_k127_2517092_3 Belongs to the thiolase family K00632 - 2.3.1.16 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000539 591.0
DYD1_k127_2517092_4 Enoyl-(Acyl carrier protein) reductase K13775 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002525 367.0
DYD1_k127_2517092_5 Outer membrane protein transport protein (OMPP1/FadL/TodX) K06076 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003893 368.0
DYD1_k127_2517092_6 Enoyl-CoA hydratase/isomerase K15313 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000485 251.0
DYD1_k127_2517092_7 Thioesterase superfamily protein K10806 - - 0.0000000000000000000000000000000000000000000000000000006552 194.0
DYD1_k127_2517092_8 Electron transfer flavoprotein-ubiquinone oxidoreductase K00311 - 1.5.5.1 0.00000000000000000000000000000001232 126.0
DYD1_k127_2571405_0 Part of the Sec protein translocase complex. Interacts with the SecYEG preprotein conducting channel. SecDF uses the proton motive force (PMF) to complete protein translocation after the ATP-dependent function of SecA K03072 - - 1.373e-274 857.0
DYD1_k127_2571405_1 Catalyzes the base-exchange of a guanine (G) residue with the queuine precursor 7-aminomethyl-7-deazaguanine (PreQ1) at position 34 (anticodon wobble position) in tRNAs with GU(N) anticodons (tRNA-Asp, -Asn, -His and -Tyr). Catalysis occurs through a double-displacement mechanism. The nucleophile active site attacks the C1' of nucleotide 34 to detach the guanine base from the RNA, forming a covalent enzyme-RNA intermediate. The proton acceptor active site deprotonates the incoming PreQ1, allowing a nucleophilic attack on the C1' of the ribose to form the product. After dissociation, two additional enzymatic reactions on the tRNA convert PreQ1 to queuine (Q), resulting in the hypermodified nucleoside queuosine (7-(((4,5-cis-dihydroxy-2- cyclopenten-1-yl)amino)methyl)-7-deazaguanosine) K00773 - 2.4.2.29 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001748 573.0
DYD1_k127_2571405_10 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase (HPPK) K00950 - 2.7.6.3 0.000000000000000000000000000000000000000000002525 169.0
DYD1_k127_2571405_11 Belongs to the lyase 1 family. Adenylosuccinate lyase subfamily K01756 - 4.3.2.2 0.0000000000000000000000000000000000002888 142.0
DYD1_k127_2571405_12 preprotein translocase subunit YajC K03210 - - 0.00000000000000000000000000000000001141 138.0
DYD1_k127_2571405_2 Adds poly(A) tail to the 3' end of many RNAs, which usually targets these RNAs for decay. Plays a significant role in the global control of gene expression, through influencing the rate of transcript degradation, and in the general RNA quality control K00970 - 2.7.7.19 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009054 538.0
DYD1_k127_2571405_3 Transfers and isomerizes the ribose moiety from AdoMet to the 7-aminomethyl group of 7-deazaguanine (preQ1-tRNA) to give epoxyqueuosine (oQ-tRNA) K07568 GO:0002097,GO:0002099,GO:0003674,GO:0003824,GO:0006139,GO:0006396,GO:0006399,GO:0006400,GO:0006725,GO:0006807,GO:0008033,GO:0008150,GO:0008152,GO:0008616,GO:0009058,GO:0009116,GO:0009119,GO:0009163,GO:0009451,GO:0009987,GO:0010467,GO:0016070,GO:0016740,GO:0016853,GO:0018130,GO:0019438,GO:0034404,GO:0034470,GO:0034641,GO:0034654,GO:0034660,GO:0042455,GO:0043170,GO:0043412,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0044283,GO:0046116,GO:0046483,GO:0051075,GO:0055086,GO:0071704,GO:0090304,GO:0140098,GO:0140101,GO:1901135,GO:1901137,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576,GO:1901657,GO:1901659 2.4.99.17 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003319 422.0
DYD1_k127_2571405_4 Part of the Sec protein translocase complex. Interacts with the SecYEG preprotein conducting channel. SecDF uses the proton motive force (PMF) to complete protein translocation after the ATP-dependent function of SecA K03074 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002654 411.0
DYD1_k127_2571405_5 Catalyzes the reversible reaction in which hydroxymethyl group from 5,10-methylenetetrahydrofolate is transferred onto alpha-ketoisovalerate to form ketopantoate K00606 - 2.1.2.11 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009728 363.0
DYD1_k127_2571405_6 Catalyzes the condensation of pantoate with beta-alanine in an ATP-dependent reaction via a pantoyl-adenylate intermediate K01918 - 6.3.2.1 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001716 336.0
DYD1_k127_2571405_7 Deoxynucleoside kinase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000002557 287.0
DYD1_k127_2571405_8 SNARE associated Golgi protein K03975 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000012 276.0
DYD1_k127_2571405_9 Tetratricopeptide repeat - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000001831 280.0
DYD1_k127_2573402_0 DNA polymerase involved in damage-induced mutagenesis and translesion synthesis (TLS). It is not the major replicative DNA polymerase K14162 - 2.7.7.7 1.157e-290 912.0
DYD1_k127_2573402_1 Nucleotidyltransferase DNA polymerase involved in DNA repair K14161 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002788 391.0
DYD1_k127_2573402_2 Represses a number of genes involved in the response to DNA damage (SOS response), including recA and lexA. In the presence of single-stranded DNA, RecA interacts with LexA causing an autocatalytic cleavage which disrupts the DNA-binding part of LexA, leading to derepression of the SOS regulon and eventually DNA repair K01356 - 3.4.21.88 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000033 276.0
DYD1_k127_2573402_3 Component of the SOS system and an inhibitor of cell division. Accumulation of SulA causes rapid cessation of cell division and the appearance of long, non-septate filaments. In the presence of GTP, binds a polymerization-competent form of FtsZ in a 1 1 ratio, thus inhibiting FtsZ polymerization and therefore preventing it from participating in the assembly of the Z ring. This mechanism prevents the premature segregation of damaged DNA to daughter cells during cell division K13053,K14160 - - 0.000000000000000000000000000000000000000000000000001588 190.0
DYD1_k127_2573402_4 Required for maturation of 30S ribosomal subunits K09748 - - 0.0000000000000000000000000000004779 124.0
DYD1_k127_2587386_0 2-methylcitrate dehydratase K01720 - 4.2.1.79 7.943e-243 757.0
DYD1_k127_2587386_1 COG2141 Coenzyme F420-dependent N5,N10-methylene tetrahydromethanopterin reductase and related flavin-dependent oxidoreductases - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006762 520.0
DYD1_k127_2587386_2 Dihydrolipoamide acetyltransferase component of pyruvate dehydrogenase complex K00627 - 2.3.1.12 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003515 494.0
DYD1_k127_2587386_3 Transketolase, pyrimidine binding domain K00162 - 1.2.4.1 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004593 471.0
DYD1_k127_2587386_4 e1 component (alpha subunit) K00161 - 1.2.4.1 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004253 444.0
DYD1_k127_2587386_5 Metallo-beta-lactamase superfamily - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006144 404.0
DYD1_k127_2587386_6 Thioredoxin-like - - - 0.0000000000000000000000000000000002886 143.0
DYD1_k127_2587386_7 Catalyzes the condensation of the acetyl group of acetyl-CoA with 3-methyl-2-oxobutanoate (2-oxoisovalerate) to form 3-carboxy-3-hydroxy-4-methylpentanoate (2-isopropylmalate) - - - 0.00000000000002322 74.0
DYD1_k127_2618513_0 FAD linked oxidases, C-terminal domain K00102,K00104,K03777 - 1.1.2.4,1.1.3.15,1.1.5.12 4.285e-236 738.0
DYD1_k127_2618513_1 transport system fused permease components - - - 5.292e-233 737.0
DYD1_k127_2618513_2 4Fe-4S dicluster domain K11473 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001404 473.0
DYD1_k127_2618513_3 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase K00042 - 1.1.1.60 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004934 464.0
DYD1_k127_2618513_4 FAD binding domain K11472 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005644 407.0
DYD1_k127_2618513_5 Belongs to the hyi family K01816 GO:0003674,GO:0003824,GO:0005488,GO:0005515,GO:0006081,GO:0006082,GO:0008150,GO:0008152,GO:0008903,GO:0009987,GO:0016853,GO:0016860,GO:0016861,GO:0019752,GO:0032787,GO:0042802,GO:0042803,GO:0043436,GO:0044237,GO:0044281,GO:0046487,GO:0046983,GO:0071704 5.3.1.22 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009681 395.0
DYD1_k127_2618513_6 transport system periplasmic component K07080 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006893 367.0
DYD1_k127_2658720_0 GXGXG motif K00265,K00284 - 1.4.1.13,1.4.1.14,1.4.7.1 0.0 2307.0
DYD1_k127_2658720_1 PFAM glycosyl transferase, family 51 K05366 - 2.4.1.129,3.4.16.4 5.234e-310 967.0
DYD1_k127_2658720_10 Type IV pilus assembly protein PilM K02662 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000848 490.0
DYD1_k127_2658720_11 Catalyzes the conversion of 3-deoxy-D-arabino- heptulosonate 7-phosphate (DAHP) to dehydroquinate (DHQ) K01735 - 4.2.3.4 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001177 481.0
DYD1_k127_2658720_12 Phosphomethylpyrimidine kinase K00941 - 2.7.1.49,2.7.4.7 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000105 442.0
DYD1_k127_2658720_13 Catalyzes the NAD(P)-dependent oxidation of 4- (phosphohydroxy)-L-threonine (HTP) into 2-amino-3-oxo-4- (phosphohydroxy)butyric acid which spontaneously decarboxylates to form 3-amino-2-oxopropyl phosphate (AHAP) K00097 - 1.1.1.262 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001496 414.0
DYD1_k127_2658720_14 Phosphotransferase enzyme family K07102 - 2.7.1.221 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007403 410.0
DYD1_k127_2658720_15 FAD binding domain K03185 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004091 333.0
DYD1_k127_2658720_16 Specifically dimethylates two adjacent adenosines (A1518 and A1519) in the loop of a conserved hairpin near the 3'-end of 16S rRNA in the 30S particle. May play a critical role in biogenesis of 30S subunits K02528 - 2.1.1.182 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004576 320.0
DYD1_k127_2658720_17 Nucleotidyl transferase K00992 - 2.7.7.99 0.000000000000000000000000000000000000000000000000000000000000000000000000000009928 267.0
DYD1_k127_2658720_18 Pilus assembly protein, PilO K02664 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000004346 255.0
DYD1_k127_2658720_19 PFAM cytochrome c, class I - - - 0.0000000000000000000000000000000000000000000000000000000000000000006362 235.0
DYD1_k127_2658720_2 type IV pilus secretin PilQ K02666 - - 4.218e-266 836.0
DYD1_k127_2658720_20 provides electrons to the alpha subunit, which binds L-glutamine and 2-oxoglutarate and forms L-glutamate K00266 - 1.4.1.13,1.4.1.14 0.0000000000000000000000000000000000000000000000000000000000000000007372 235.0
DYD1_k127_2658720_21 Catalyzes the conversion of hemimercaptal, formed from methylglyoxal and glutathione, to S-lactoylglutathione K01759 - 4.4.1.5 0.00000000000000000000000000000000000000000000000000000000000000005737 224.0
DYD1_k127_2658720_22 Condenses 4-methyl-5-(beta-hydroxyethyl)thiazole monophosphate (THZ-P) and 2-methyl-4-amino-5-hydroxymethyl pyrimidine pyrophosphate (HMP-PP) to form thiamine monophosphate (TMP) K00788 - 2.5.1.3 0.000000000000000000000000000000000000000000000000000000000000002769 225.0
DYD1_k127_2658720_23 Necessary for normal cell division and for the maintenance of normal septation K03978 - - 0.0000000000000000000000000000000000000000000000000000000001042 214.0
DYD1_k127_2658720_24 Catalyzes the specific phosphorylation of the 3-hydroxyl group of shikimic acid using ATP as a cosubstrate K00891 - 2.7.1.71 0.000000000000000000000000000000000000000000000000000000009647 203.0
DYD1_k127_2658720_25 Fimbrial assembly protein (PilN) K02663 - - 0.00000000000000000000000000000000000000000000000000001818 196.0
DYD1_k127_2658720_26 mRNA catabolic process - - - 0.00000000000000000000000000000000000000000000001797 178.0
DYD1_k127_2658720_27 pilus assembly protein PilP K02665 - - 0.0000000000000000000000000000000000000000000007182 171.0
DYD1_k127_2658720_28 Rubredoxin - - - 0.000000000000000000000000000009365 118.0
DYD1_k127_2658720_29 Belongs to the transcriptional regulatory Fis family K03557 - - 0.00000000000000000000000001074 114.0
DYD1_k127_2658720_3 Aminotransferase K01845 - 5.4.3.8 1.336e-200 635.0
DYD1_k127_2658720_30 - - - - 0.0000000000000003361 83.0
DYD1_k127_2658720_4 Together with LptE, is involved in the assembly of lipopolysaccharide (LPS) at the surface of the outer membrane K04744 - - 5.34e-198 642.0
DYD1_k127_2658720_5 peptidase M24B, X-Pro dipeptidase aminopeptidase K01262 - 3.4.11.9 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002981 603.0
DYD1_k127_2658720_6 Belongs to the dGTPase family. Type 2 subfamily K01129 - 3.1.5.1 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006113 539.0
DYD1_k127_2658720_7 Catalyzes the synthesis of 5,6-dihydrouridine (D), a modified base found in the D-loop of most tRNAs, via the reduction of the C5-C6 double bond in target uridines K05540 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008996 537.0
DYD1_k127_2658720_8 Chaperone involved in the correct folding and assembly of outer membrane proteins. Recognizes specific patterns of aromatic residues and the orientation of their side chains, which are found more frequently in integral outer membrane proteins. May act in both early periplasmic and late outer membrane-associated steps of protein maturation K03771 - 5.2.1.8 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002247 511.0
DYD1_k127_2658720_9 Delta-aminolevulinic acid dehydratase K01698 GO:0003674,GO:0003824,GO:0004655,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006725,GO:0006778,GO:0006779,GO:0006783,GO:0006807,GO:0008150,GO:0008152,GO:0008270,GO:0009058,GO:0009987,GO:0016829,GO:0016835,GO:0016836,GO:0018130,GO:0019438,GO:0033013,GO:0033014,GO:0034641,GO:0042168,GO:0042440,GO:0043167,GO:0043169,GO:0044237,GO:0044249,GO:0044271,GO:0044424,GO:0044444,GO:0044464,GO:0046148,GO:0046483,GO:0046872,GO:0046914,GO:0051186,GO:0051188,GO:0071704,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576 4.2.1.24 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006316 503.0
DYD1_k127_2659840_0 Belongs to the class-II pyridine nucleotide-disulfide oxidoreductase family K00384 - 1.8.1.9 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000045 526.0
DYD1_k127_2659840_1 PFAM cell divisionFtsK SpoIIIE K03466 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001111 483.0
DYD1_k127_2659840_2 Catalyzes the ATP-dependent amidation of deamido-NAD to form NAD. Uses L-glutamine as a nitrogen source K01916,K01950 - 6.3.1.5,6.3.5.1 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001897 395.0
DYD1_k127_2659840_3 Transcriptional regulator crp fnr family K10914 - - 0.0000000000000000000000000000000000000000000000000000000000002543 223.0
DYD1_k127_2659840_4 Belongs to the P(II) protein family K04751 - - 0.000000000000000000000000000000000000000000000000000000001677 201.0
DYD1_k127_2659840_5 Small MutS-related domain - - - 0.000000000000000000000000000000000000000000109 179.0
DYD1_k127_2659840_6 FecR protein - - - 0.0000000000000000000000000000000000008934 152.0
DYD1_k127_2671302_0 Aldehyde dehydrogenase family K00128,K00146 - 1.2.1.3,1.2.1.39 5.447e-225 709.0
DYD1_k127_2671302_1 COG1788 Acyl CoA acetate 3-ketoacid CoA transferase, alpha subunit K01039 - 2.8.3.12 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001154 338.0
DYD1_k127_2671302_10 Glutathione S-transferase, N-terminal domain K00799 - 2.5.1.18 0.000000000000000000000000000000000007137 154.0
DYD1_k127_2671302_11 One of the essential components for the initiation of protein synthesis. Stabilizes the binding of IF-2 and IF-3 on the 30S subunit to which N-formylmethionyl-tRNA(fMet) subsequently binds. Helps modulate mRNA selection, yielding the 30S pre- initiation complex (PIC). Upon addition of the 50S ribosomal subunit IF-1, IF-2 and IF-3 are released leaving the mature 70S translation initation complex K02518 - - 0.0000000000000000000000000000005829 124.0
DYD1_k127_2671302_12 PFAM RNP-1 like RNA-binding protein - - - 0.00000000000000000000000001721 112.0
DYD1_k127_2671302_13 Cold shock protein domain K03704 - - 0.000000000000000000000005805 103.0
DYD1_k127_2671302_14 Cold shock K03704 - - 0.0000000000000000003264 93.0
DYD1_k127_2671302_15 Protein of unknown function (DUF3012) - - - 0.000000000000000003237 93.0
DYD1_k127_2671302_16 Transglycosylase associated protein - - - 0.00000000004079 67.0
DYD1_k127_2671302_17 Cupin 2, conserved barrel domain protein K19547 - 5.3.3.19 0.0000002148 62.0
DYD1_k127_2671302_2 COG2057 Acyl CoA acetate 3-ketoacid CoA transferase, beta subunit K01040 - 2.8.3.12 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003405 319.0
DYD1_k127_2671302_3 Succinyl-CoA synthetase functions in the citric acid cycle (TCA), coupling the hydrolysis of succinyl-CoA to the synthesis of either ATP or GTP and thus represents the only step of substrate-level phosphorylation in the TCA. The alpha subunit of the enzyme binds the substrates coenzyme A and phosphate, while succinate binding and nucleotide specificity is provided by the beta subunit K01902 - 6.2.1.5 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000092 310.0
DYD1_k127_2671302_4 Succinyl-CoA synthetase functions in the citric acid cycle (TCA), coupling the hydrolysis of succinyl-CoA to the synthesis of either ATP or GTP and thus represents the only step of substrate-level phosphorylation in the TCA. The beta subunit provides nucleotide specificity of the enzyme and binds the substrate succinate, while the binding sites for coenzyme A and phosphate are found in the alpha subunit - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000003319 293.0
DYD1_k127_2671302_5 Enoyl-CoA hydratase/isomerase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000002683 255.0
DYD1_k127_2671302_6 MmgE/PrpD family - - - 0.000000000000000000000000000000000000000000000000000000000000000001558 238.0
DYD1_k127_2671302_7 Serine aminopeptidase, S33 - - - 0.0000000000000000000000000000000000000000000000000000000000004643 224.0
DYD1_k127_2671302_8 FAD dependent oxidoreductase K19746 - 1.4.99.6 0.000000000000000000000000000000000000000000413 159.0
DYD1_k127_2671302_9 Lanthionine synthetase C family protein - - - 0.000000000000000000000000000000000000000001764 163.0
DYD1_k127_2672940_0 Extracellular solute-binding protein - - - 3.715e-319 991.0
DYD1_k127_2672940_1 ATP-dependent serine protease that mediates the selective degradation of mutant and abnormal proteins as well as certain short-lived regulatory proteins. Required for cellular homeostasis and for survival from DNA damage and developmental changes induced by stress. Degrades polypeptides processively to yield small peptide fragments that are 5 to 10 amino acids long. Binds to DNA in a double-stranded, site-specific manner K01338 - 3.4.21.53 2.548e-311 960.0
DYD1_k127_2672940_10 Amidohydrolase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006887 323.0
DYD1_k127_2672940_11 Thiolesterase that catalyzes the hydrolysis of S-D- lactoyl-glutathione to form glutathione and D-lactic acid K01069 - 3.1.2.6 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006399 317.0
DYD1_k127_2672940_12 DNA polymerase III is a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria. The epsilon subunit contain the editing function and is a proofreading 3'-5' exonuclease K02342 - 2.7.7.7 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000001003 301.0
DYD1_k127_2672940_13 NADH pyrophosphatase-like rudimentary NUDIX domain K03426 - 3.6.1.22 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000006337 287.0
DYD1_k127_2672940_14 Methyltransferase domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000009136 282.0
DYD1_k127_2672940_15 Endonuclease that specifically degrades the RNA of RNA- DNA hybrids K03469 - 3.1.26.4 0.00000000000000000000000000000000000000000000000000000000000000000002488 235.0
DYD1_k127_2672940_16 Histone-like DNA-binding protein which is capable of wrapping DNA to stabilize it, and thus to prevent its denaturation under extreme environmental conditions K03530 - - 0.0000000000000000000000000000001436 128.0
DYD1_k127_2672940_18 - - - - 0.000000000000000005537 86.0
DYD1_k127_2672940_2 Belongs to the ABC transporter superfamily K02031,K02032 - - 7.031e-274 861.0
DYD1_k127_2672940_3 PFAM binding-protein-dependent transport systems inner membrane component K02034 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008822 589.0
DYD1_k127_2672940_4 Adenylyltransferase that mediates the addition of adenosine 5'-monophosphate (AMP) to specific residues of target proteins - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001867 511.0
DYD1_k127_2672940_5 ABC-type dipeptide oligopeptide nickel transport systems, permease components K02033 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006175 479.0
DYD1_k127_2672940_6 peptidylprolyl isomerase K03770 - 5.2.1.8 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001257 486.0
DYD1_k127_2672940_7 filamentation induced by cAMP protein Fic - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001064 451.0
DYD1_k127_2672940_8 LysM domain K08307 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002483 387.0
DYD1_k127_2672940_9 Enoyl- acyl-carrier-protein reductase NADH K00208 - 1.3.1.10,1.3.1.9 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004517 368.0
DYD1_k127_2680544_0 Couples transcription and DNA repair by recognizing RNA polymerase (RNAP) stalled at DNA lesions. Mediates ATP-dependent release of RNAP and its truncated transcript from the DNA, and recruitment of nucleotide excision repair machinery to the damaged site K03723 - - 0.0 1037.0
DYD1_k127_2680544_1 Radical SAM superfamily K04069 - 1.97.1.4 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000949 611.0
DYD1_k127_2680544_2 Belongs to the MEMO1 family K06990 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000474 338.0
DYD1_k127_2680544_3 Memo-like protein K06990 - - 0.00000000000000000000000000000000000000000000000000000000000007975 220.0
DYD1_k127_2693947_0 Patched family - - - 0.0 1185.0
DYD1_k127_2693947_1 succinate dehydrogenase fumarate reductase, flavoprotein subunit K00394 - 1.8.99.2 0.0 1046.0
DYD1_k127_2693947_10 Belongs to the SUA5 family - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000005992 295.0
DYD1_k127_2693947_11 - - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000002945 289.0
DYD1_k127_2693947_12 Tripartite tricarboxylate transporter family receptor - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000004226 288.0
DYD1_k127_2693947_13 HNH endonuclease - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000001079 272.0
DYD1_k127_2693947_14 ABC transporter K02003 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000161 267.0
DYD1_k127_2693947_15 Participates in chromosomal partition during cell division. May act via the formation of a condensin-like complex containing Smc and ScpA that pull DNA away from mid-cell into both cell halves K06024 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000008414 254.0
DYD1_k127_2693947_16 Biotin-lipoyl like K07799 - - 0.000000000000000000000000000000000000000000000000000000000000000000000008274 259.0
DYD1_k127_2693947_17 reductase, beta subunit K00395 - 1.8.99.2 0.0000000000000000000000000000000000000000000000000000000000000000004282 231.0
DYD1_k127_2693947_18 CyaE is necessary for transport of calmodulin-sensitive adenylate cyclase-hemolysin (cyclolysin) - - - 0.000000000000000000000000000000000000000000000000000000000000000003101 246.0
DYD1_k127_2693947_19 Calcineurin-like phosphoesterase superfamily domain K07095 - - 0.000000000000000000000000000000000000000000000000000000003111 205.0
DYD1_k127_2693947_2 FtsX-like permease family K02004 - - 2.301e-248 792.0
DYD1_k127_2693947_20 Protein of unknown function (DUF1223) - - - 0.000000000000000000000000000000000000000000000000000006661 199.0
DYD1_k127_2693947_21 - - - - 0.000000000000000008642 88.0
DYD1_k127_2693947_22 - - - - 0.000000623 55.0
DYD1_k127_2693947_3 Tryptophanyl-tRNA synthetase K01867 - 6.1.1.2 2.511e-221 691.0
DYD1_k127_2693947_4 Belongs to the sulfate adenylyltransferase family K00958 - 2.7.7.4 4.341e-212 665.0
DYD1_k127_2693947_5 PFAM Rhodanese domain protein - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001277 617.0
DYD1_k127_2693947_6 Glucose sorbosone K21430 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002002 537.0
DYD1_k127_2693947_7 Belongs to the DEAD box helicase family K11927 - 3.6.4.13 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005275 523.0
DYD1_k127_2693947_8 Lipocalin-like domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004213 405.0
DYD1_k127_2693947_9 Participates in chromosomal partition during cell division. May act via the formation of a condensin-like complex containing Smc and ScpB that pull DNA away from mid-cell into both cell halves K05896 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004711 321.0
DYD1_k127_2705760_0 Male sterility protein K01710 - 4.2.1.46 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000147 550.0
DYD1_k127_2705760_1 transferase K02527 - 2.4.99.12,2.4.99.13,2.4.99.14,2.4.99.15 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001897 482.0
DYD1_k127_2705760_2 type I secretion outer membrane protein, TolC K12340 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005608 391.0
DYD1_k127_2705760_3 Glycosyltransferase family 9 (heptosyltransferase) K02841 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005607 323.0
DYD1_k127_2705760_4 protein-L-isoaspartate(D-aspartate) O-methyltransferase K00573 - 2.1.1.77 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000001042 301.0
DYD1_k127_2705760_5 Catalyzes the synthesis of activated sulfate K00860,K00955 - 2.7.1.25,2.7.7.4 0.00000000000000000000000000000000000000000000000000000000000000000000017 244.0
DYD1_k127_2705760_6 Belongs to the 5-formyltetrahydrofolate cyclo-ligase family K01934 GO:0003674,GO:0003824,GO:0006082,GO:0006575,GO:0006725,GO:0006730,GO:0006732,GO:0006760,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009108,GO:0009396,GO:0009987,GO:0016053,GO:0016874,GO:0016879,GO:0016882,GO:0018130,GO:0019438,GO:0019752,GO:0022611,GO:0030272,GO:0032502,GO:0034641,GO:0035999,GO:0042398,GO:0042558,GO:0042559,GO:0043436,GO:0043603,GO:0043604,GO:0044237,GO:0044249,GO:0044271,GO:0044281,GO:0044283,GO:0046394,GO:0046483,GO:0046653,GO:0051186,GO:0051188,GO:0071704,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576 6.3.3.2 0.000000000000000000000000000000000000000000000008171 179.0
DYD1_k127_2705760_7 Catalyzes the formation of dTDP-glucose, from dTTP and glucose 1-phosphate, as well as its pyrophosphorolysis K00973 GO:0000271,GO:0000287,GO:0003674,GO:0003824,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005975,GO:0005976,GO:0008150,GO:0008152,GO:0008879,GO:0009058,GO:0009059,GO:0009987,GO:0016051,GO:0016740,GO:0016772,GO:0016779,GO:0033692,GO:0034637,GO:0034645,GO:0042802,GO:0043167,GO:0043169,GO:0043170,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044262,GO:0044264,GO:0044424,GO:0044444,GO:0044464,GO:0045226,GO:0046379,GO:0046872,GO:0071704,GO:1901576 2.7.7.24 0.00000000000000000000000000000003007 126.0
DYD1_k127_2705760_8 STAS domain K06378 - - 0.0000000000000000000000000689 112.0
DYD1_k127_2705760_9 Beta-lactamase superfamily domain - - - 0.000000000000000000008757 97.0
DYD1_k127_2717038_0 Catalyzes the NADPH-dependent formation of L-aspartate- semialdehyde (L-ASA) by the reductive dephosphorylation of L- aspartyl-4-phosphate K00133 GO:0000096,GO:0000097,GO:0003674,GO:0003824,GO:0004073,GO:0006082,GO:0006520,GO:0006549,GO:0006553,GO:0006555,GO:0006566,GO:0006790,GO:0006807,GO:0008150,GO:0008152,GO:0008652,GO:0009058,GO:0009066,GO:0009067,GO:0009081,GO:0009082,GO:0009085,GO:0009086,GO:0009088,GO:0009089,GO:0009097,GO:0009987,GO:0016053,GO:0016491,GO:0016620,GO:0016903,GO:0019752,GO:0043436,GO:0043648,GO:0044237,GO:0044238,GO:0044249,GO:0044272,GO:0044281,GO:0044283,GO:0046394,GO:0046451,GO:0055114,GO:0071704,GO:1901564,GO:1901566,GO:1901576,GO:1901605,GO:1901607 1.2.1.11 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001444 534.0
DYD1_k127_2717038_1 Catalyzes the oxidation of 3-carboxy-2-hydroxy-4- methylpentanoate (3-isopropylmalate) to 3-carboxy-4-methyl-2- oxopentanoate. The product decarboxylates to 4-methyl-2 oxopentanoate K00052 GO:0003674,GO:0003824,GO:0003862,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006082,GO:0006520,GO:0006551,GO:0006807,GO:0008150,GO:0008152,GO:0008652,GO:0009058,GO:0009081,GO:0009082,GO:0009098,GO:0009987,GO:0016053,GO:0016491,GO:0016614,GO:0016616,GO:0019752,GO:0043436,GO:0044237,GO:0044238,GO:0044249,GO:0044281,GO:0044283,GO:0044424,GO:0044444,GO:0044464,GO:0046394,GO:0055114,GO:0071704,GO:1901564,GO:1901566,GO:1901576,GO:1901605,GO:1901607 1.1.1.85 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008482 520.0
DYD1_k127_2717038_2 Catalyzes the isomerization between 2-isopropylmalate and 3-isopropylmalate, via the formation of 2-isopropylmaleate K01704 - 4.2.1.33,4.2.1.35 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001774 349.0
DYD1_k127_2717038_3 Catalyzes the isomerization between 2-isopropylmalate and 3-isopropylmalate, via the formation of 2-isopropylmaleate K01703 - 4.2.1.33,4.2.1.35 0.000000000000000000000000000000000000000000003119 164.0
DYD1_k127_2731299_0 Belongs to the PEP-utilizing enzyme family K01006 - 2.7.9.1 0.0 1086.0
DYD1_k127_2731299_1 Broad specificity carboxypetidase that releases amino acids sequentially from the C-terminus, including neutral, aromatic, polar and basic residues K01299 - 3.4.17.19 6.462e-259 804.0
DYD1_k127_2731299_10 Major Facilitator Superfamily - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002862 368.0
DYD1_k127_2731299_11 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000123 357.0
DYD1_k127_2731299_12 Enoyl-CoA hydratase/isomerase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003797 335.0
DYD1_k127_2731299_13 - - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008513 306.0
DYD1_k127_2731299_14 Taurine catabolism dioxygenase TauD, TfdA family K03119 - 1.14.11.17 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000001272 286.0
DYD1_k127_2731299_15 Protein conserved in bacteria - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000008868 277.0
DYD1_k127_2731299_16 Flavin containing amine oxidoreductase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000008279 256.0
DYD1_k127_2731299_17 transporter component K07112 - - 0.00000000000000000000000000000000000000000000000000000000000009856 216.0
DYD1_k127_2731299_18 DinB family - - - 0.0000000000000000000000000000000000000000000000000000000005434 207.0
DYD1_k127_2731299_19 transporter component K07112 - - 0.0000000000000000000000000000000000000000000000000000003932 203.0
DYD1_k127_2731299_2 PFAM AMP-dependent synthetase and ligase - - - 1.939e-211 670.0
DYD1_k127_2731299_20 Cupin domain - - - 0.0000000000000000000000000008994 126.0
DYD1_k127_2731299_24 - - - - 0.000000000000000000006651 96.0
DYD1_k127_2731299_25 Cupin domain - - - 0.00000000000000006948 93.0
DYD1_k127_2731299_28 - - - - 0.00000000000006656 78.0
DYD1_k127_2731299_29 2OG-Fe(II) oxygenase superfamily - - - 0.000000000008552 74.0
DYD1_k127_2731299_3 acyl-CoA dehydrogenase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009181 568.0
DYD1_k127_2731299_30 LTXXQ motif family protein - - - 0.0000000001735 70.0
DYD1_k127_2731299_4 A protein kinase that phosphorylates Ser and Thr residues. Probably acts to suppress the effects of stress linked to accumulation of reactive oxygen species. Probably involved in the extracytoplasmic stress response - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005936 466.0
DYD1_k127_2731299_5 Histidine kinase K05962 - 2.7.13.1 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004025 460.0
DYD1_k127_2731299_6 acyl-CoA dehydrogenase K00249 - 1.3.8.7 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001059 392.0
DYD1_k127_2731299_7 PFAM Extradiol ring-cleavage dioxygenase, class III enzyme, subunit B - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009069 375.0
DYD1_k127_2731299_8 COG0745 Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain K02483 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002505 365.0
DYD1_k127_2731299_9 Esterase of the alpha-beta hydrolase superfamily K07001 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006064 369.0
DYD1_k127_2749387_0 Transfers a succinyl group from succinyl-CoA to L- homoserine, forming succinyl-L-homoserine K00641 - 2.3.1.31 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000097 594.0
DYD1_k127_2749387_1 Major facilitator superfamily K08218 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001349 556.0
DYD1_k127_2749387_2 PFAM fumarylacetoacetate (FAA) hydrolase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006842 314.0
DYD1_k127_2749387_3 xylanase chitin deacetylase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000002113 292.0
DYD1_k127_2749387_4 PFAM Methionine biosynthesis MetW - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000003194 293.0
DYD1_k127_2749387_5 Exodeoxyribonuclease III K01142 - 3.1.11.2 0.000002675 49.0
DYD1_k127_27988_0 One of the essential components for the initiation of protein synthesis. Protects formylmethionyl-tRNA from spontaneous hydrolysis and promotes its binding to the 30S ribosomal subunits. Also involved in the hydrolysis of GTP during the formation of the 70S ribosomal complex K02519 - - 4.851e-319 996.0
DYD1_k127_27988_1 One of several proteins that assist in the late maturation steps of the functional core of the 30S ribosomal subunit. Associates with free 30S ribosomal subunits (but not with 30S subunits that are part of 70S ribosomes or polysomes). Required for efficient processing of 16S rRNA. May interact with the 5'-terminal helix region of 16S rRNA K02834 - - 0.00000000000000000000000000000001854 130.0
DYD1_k127_27988_2 Participates in both transcription termination and antitermination K02600 - - 0.0000000000000000000003444 97.0
DYD1_k127_2809314_0 Cytochrome c-type biogenesis protein CcmF K02198 - - 1.731e-296 926.0
DYD1_k127_2809314_1 Required for the export of heme to the periplasm for the biogenesis of c-type cytochromes K02195 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000701 394.0
DYD1_k127_2809314_2 Required for the export of heme to the periplasm for the biogenesis of c-type cytochromes K02194 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000002182 274.0
DYD1_k127_2809314_3 Acts both as a biotin-- acetyl-CoA-carboxylase ligase and a repressor K03524 - 6.3.4.15 0.00000000000000000000000000000000000000000000000000000000000000000002127 240.0
DYD1_k127_2809314_4 Redoxin K02199 - - 0.00000000000000000000000000000000000000000000000000000000000000007358 228.0
DYD1_k127_2809314_5 Heme chaperone required for the biogenesis of c-type cytochromes. Transiently binds heme delivered by CcmC and transfers the heme to apo-cytochromes in a process facilitated by CcmF and CcmH K02197 - - 0.0000000000000000000000000000000000000000000000000000000000002134 219.0
DYD1_k127_2809314_6 once thought to export heme, this seems not to be the case, but its exact role is uncertain. Responsible for energy coupling to the transport system K02193 - 3.6.3.41 0.000000000000000000000000000000000000000000000000000000005776 206.0
DYD1_k127_2809314_7 Cytochrome c-type biogenesis protein K02200 - - 0.000000000000000000000000000000000000000000000000000008358 205.0
DYD1_k127_2809314_8 subunit of a heme lyase K02200 - - 0.000000000000000000000000000000000000000000001437 170.0
DYD1_k127_2809314_9 Required for the export of heme to the periplasm for the biogenesis of c-type cytochromes K02196 - - 0.0000000002988 66.0
DYD1_k127_2833513_0 ABC-type transport system involved in lysophospholipase L1 biosynthesis, permease component K02004 - - 5.47e-247 788.0
DYD1_k127_2833513_1 Belongs to the prokaryotic molybdopterin-containing oxidoreductase family K00123 - 1.17.1.9 1.949e-245 767.0
DYD1_k127_2833513_10 Belongs to the bacterial glucokinase family K00845 - 2.7.1.2 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000003256 292.0
DYD1_k127_2833513_11 Transfers a GMP moiety from GTP to Mo-molybdopterin (Mo- MPT) cofactor (Moco or molybdenum cofactor) to form Mo- molybdopterin guanine dinucleotide (Mo-MGD) cofactor K03752 - 2.7.7.77 0.0000000000000000000000000000000000000000000000000000000000000000000000000252 257.0
DYD1_k127_2833513_12 GDSL-like Lipase/Acylhydrolase K10804 GO:0003674,GO:0003824,GO:0004620,GO:0004622,GO:0005488,GO:0005515,GO:0005575,GO:0005623,GO:0006508,GO:0006807,GO:0008150,GO:0008152,GO:0008233,GO:0016289,GO:0016290,GO:0016298,GO:0016787,GO:0016788,GO:0016790,GO:0019538,GO:0030288,GO:0030313,GO:0031975,GO:0042597,GO:0042802,GO:0043170,GO:0044238,GO:0044464,GO:0047617,GO:0052689,GO:0071704,GO:0140096,GO:1901564 3.1.1.5 0.0000000000000000000000000000000000000000000000000000000000000009047 229.0
DYD1_k127_2833513_13 Protein of unknown function (DUF3305) - - - 0.0000000000000000000000000000000005227 137.0
DYD1_k127_2833513_14 cytoplasmic chaperone TorD family protein - - - 0.00000000000000000000000000000004524 133.0
DYD1_k127_2833513_15 Protein of unknown function (DUF3306) - - - 0.000000000000005452 82.0
DYD1_k127_2833513_2 4Fe-4S dicluster domain - - - 1.786e-230 733.0
DYD1_k127_2833513_3 Diguanylate cyclase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003097 623.0
DYD1_k127_2833513_4 Catalyzes the cyclization of GTP to (8S)-3',8-cyclo-7,8- dihydroguanosine 5'-triphosphate K03639 - 4.1.99.22 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001092 491.0
DYD1_k127_2833513_5 RmuC family K09760 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004114 467.0
DYD1_k127_2833513_6 Synthesizes selenophosphate from selenide and ATP K01008 - 2.7.9.3 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005294 460.0
DYD1_k127_2833513_7 Required for formate dehydrogenase (FDH) activity. Acts as a sulfur carrier protein that transfers sulfur from IscS to the molybdenum cofactor prior to its insertion into FDH K02379 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004867 396.0
DYD1_k127_2833513_8 ABC transporter K02003 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009161 304.0
DYD1_k127_2833513_9 Belongs to the MtfA family K09933 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000002185 301.0
DYD1_k127_2932174_0 Alpha amylase, catalytic domain - - - 7.221e-319 1002.0
DYD1_k127_2932174_1 X-Pro dipeptidyl-peptidase C-terminal non-catalytic domain K06978 - - 3.825e-236 744.0
DYD1_k127_2932174_10 Antioxidant protein with alkyl hydroperoxidase activity. Required for the reduction of the AhpC active site cysteine residues and for the regeneration of the AhpC enzyme activity - - - 0.0001073 54.0
DYD1_k127_2932174_2 Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain K07303 - 1.3.99.16 2.808e-219 700.0
DYD1_k127_2932174_3 Belongs to the UPF0255 family - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000001701 302.0
DYD1_k127_2932174_4 KR domain K00059 - 1.1.1.100 0.000000000000000000000000000000000000000000000000000000000000000000001309 244.0
DYD1_k127_2932174_5 thiolester hydrolase activity - - - 0.000000000000000000000000000000000000000000000000000000000009608 228.0
DYD1_k127_2932174_6 Antibiotic biosynthesis monooxygenase - - - 0.00000000000000000000000000001048 121.0
DYD1_k127_2932174_7 Carboxymuconolactone decarboxylase family K01607 - 4.1.1.44 0.00000000000000003545 86.0
DYD1_k127_2932174_8 Antioxidant protein with alkyl hydroperoxidase activity. Required for the reduction of the AhpC active site cysteine residues and for the regeneration of the AhpC enzyme activity - - - 0.000003624 59.0
DYD1_k127_2932174_9 Antioxidant protein with alkyl hydroperoxidase activity. Required for the reduction of the AhpC active site cysteine residues and for the regeneration of the AhpC enzyme activity - - - 0.00009613 48.0
DYD1_k127_2946884_0 Protein of unknown function (DUF1015) - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001981 596.0
DYD1_k127_2946884_1 Couples transcription and DNA repair by recognizing RNA polymerase (RNAP) stalled at DNA lesions. Mediates ATP-dependent release of RNAP and its truncated transcript from the DNA, and recruitment of nucleotide excision repair machinery to the damaged site K03723 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004614 567.0
DYD1_k127_2946884_2 CoA-transferase family III - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005487 548.0
DYD1_k127_2946884_3 membrane transporter protein - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000004634 277.0
DYD1_k127_2946884_4 Electron transfer DM13 - - - 0.0000000000000000000000000000000000000000000000016 179.0
DYD1_k127_2950370_0 Transposase IS4 family - - - 1.34e-208 659.0
DYD1_k127_2950370_1 Beta-lactamase superfamily domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000691 312.0
DYD1_k127_2950370_2 Cupin domain K00450 - 1.13.11.4 0.000000000000000000000000000000000000000000000000000000000000000000000000000000003669 278.0
DYD1_k127_2980430_0 Part of the Sec protein translocase complex. Interacts with the SecYEG preprotein conducting channel. Has a central role in coupling the hydrolysis of ATP to the transfer of proteins into and across the cell membrane, serving both as a receptor for the preprotein-SecB complex and as an ATP-driven molecular motor driving the stepwise translocation of polypeptide chains across the membrane K03070 - - 0.0 1312.0
DYD1_k127_2980430_1 Catalyzes cross-linking of the peptidoglycan cell wall at the division septum K03587 - 3.4.16.4 4.712e-221 704.0
DYD1_k127_2980430_10 Catalyzes the addition of meso-diaminopimelic acid to the nucleotide precursor UDP-N-acetylmuramoyl-L-alanyl-D-glutamate (UMAG) in the biosynthesis of bacterial cell-wall peptidoglycan K01928 - 6.3.2.13 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003532 525.0
DYD1_k127_2980430_11 Domain of unknown function DUF21 - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008359 511.0
DYD1_k127_2980430_12 Cell wall formation. Catalyzes the addition of glutamate to the nucleotide precursor UDP-N-acetylmuramoyl-L-alanine (UMA) K01925 - 6.3.2.9 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000484 499.0
DYD1_k127_2980430_13 Involved in cell wall formation. Catalyzes the final step in the synthesis of UDP-N-acetylmuramoyl-pentapeptide, the precursor of murein K01929,K15792 - 6.3.2.10,6.3.2.13 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006149 501.0
DYD1_k127_2980430_14 Catalyzes the hydrolysis of UDP-3-O-myristoyl-N- acetylglucosamine to form UDP-3-O-myristoylglucosamine and acetate, the committed step in lipid A biosynthesis K02535 - 3.5.1.108 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005072 473.0
DYD1_k127_2980430_15 Cell wall formation. Catalyzes the transfer of a GlcNAc subunit on undecaprenyl-pyrophosphoryl-MurNAc-pentapeptide (lipid intermediate I) to form undecaprenyl-pyrophosphoryl-MurNAc- (pentapeptide)GlcNAc (lipid intermediate II) K02563 - 2.4.1.227 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003705 430.0
DYD1_k127_2980430_16 Cell wall formation K01921 - 6.3.2.4 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002086 402.0
DYD1_k127_2980430_17 Specifically methylates the N4 position of cytidine in position 1402 (C1402) of 16S rRNA K03438 - 2.1.1.199 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006628 401.0
DYD1_k127_2980430_18 Cleaves type-4 fimbrial leader sequence and methylates the N-terminal (generally Phe) residue K02654 - 3.4.23.43 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009121 393.0
DYD1_k127_2980430_19 Protein of unknown function (DUF815) K06923 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000103 391.0
DYD1_k127_2980430_2 Belongs to the MurCDEF family K01924 - 6.3.2.8 3.404e-213 673.0
DYD1_k127_2980430_20 Belongs to the Nudix hydrolase family K03574 - 3.6.1.55 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004011 389.0
DYD1_k127_2980430_21 Cell wall formation K00075 - 1.3.1.98 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001471 364.0
DYD1_k127_2980430_22 Peptidase family M23 K08259 - 3.4.24.75 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001405 362.0
DYD1_k127_2980430_23 Belongs to the RNA methyltransferase TrmD family K00554 - 2.1.1.228 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006103 357.0
DYD1_k127_2980430_24 Nitroreductase family K19286 - 1.5.1.39 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002107 334.0
DYD1_k127_2980430_25 PFAM Cytochrome c assembly protein - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002527 326.0
DYD1_k127_2980430_26 Cell division factor that enhances FtsZ-ring assembly. Directly interacts with FtsZ and promotes bundling of FtsZ protofilaments, with a reduction in FtsZ GTPase activity K18778 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002903 321.0
DYD1_k127_2980430_27 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000002538 302.0
DYD1_k127_2980430_28 PFAM D-galactarate dehydratase Altronate hydrolase domain protein K16846 - 4.4.1.24 0.0000000000000000000000000000000000000000000000000000000000000001743 222.0
DYD1_k127_2980430_29 Essential cell division protein. May link together the upstream cell division proteins, which are predominantly cytoplasmic, with the downstream cell division proteins, which are predominantly periplasmic. May control correct divisome assembly K03589 - - 0.000000000000000000000000000000000000000000000000000000000000007107 224.0
DYD1_k127_2980430_3 Cell division protein that is involved in the assembly of the Z ring. May serve as a membrane anchor for the Z ring K03590 - - 4.458e-210 658.0
DYD1_k127_2980430_30 MraZ protein, putative antitoxin-like K03925 - - 0.0000000000000000000000000000000000000000000000000000000001591 206.0
DYD1_k127_2980430_31 Catalyzes the phosphorylation of the 3'-hydroxyl group of dephosphocoenzyme A to form coenzyme A K00859 - 2.7.1.24 0.0000000000000000000000000000000000000000000000000000000002495 210.0
DYD1_k127_2980430_32 This protein is located at the 30S-50S ribosomal subunit interface and may play a role in the structure and function of the aminoacyl-tRNA binding site K02884 - - 0.00000000000000000000000000000000000000000000000000000005604 199.0
DYD1_k127_2980430_33 An accessory protein needed during the final step in the assembly of 30S ribosomal subunit, possibly for assembly of the head region. Probably interacts with S19. Essential for efficient processing of 16S rRNA. May be needed both before and after RbfA during the maturation of 16S rRNA. It has affinity for free ribosomal 30S subunits but not for 70S ribosomes K02860 - - 0.000000000000000000000000000000000000000000000000003199 189.0
DYD1_k127_2980430_34 SAF K16845 - 4.4.1.24 0.0000000000000000000000000000000003071 144.0
DYD1_k127_2980430_35 Belongs to the bacterial ribosomal protein bS16 family K02959 - - 0.000000000000000000000000000001577 126.0
DYD1_k127_2980430_36 Essential cell division protein. May link together the upstream cell division proteins, which are predominantly cytoplasmic, with the downstream cell division proteins, which are predominantly periplasmic K03586 - - 0.0000000000000000000000000002254 117.0
DYD1_k127_2980430_37 Inhibits all the catalytic activities of DNA gyrase by preventing its interaction with DNA. Acts by binding directly to the C-terminal domain of GyrB, which probably disrupts DNA binding by the gyrase K09862 - - 0.0000000000000000002999 95.0
DYD1_k127_2980430_4 Involved in targeting and insertion of nascent membrane proteins into the cytoplasmic membrane. Binds to the hydrophobic signal sequence of the ribosome-nascent chain (RNC) as it emerges from the ribosomes. The SRP-RNC complex is then targeted to the cytoplasmic membrane where it interacts with the SRP receptor FtsY. Interaction with FtsY leads to the transfer of the RNC complex to the Sec translocase for insertion into the membrane, the hydrolysis of GTP by both Ffh and FtsY, and the dissociation of the SRP-FtsY complex into the individual components K03106 - 3.6.5.4 3.364e-208 662.0
DYD1_k127_2980430_40 Protein of unknown function (DUF721) - - - 0.0000002443 58.0
DYD1_k127_2980430_41 - - - - 0.000001612 51.0
DYD1_k127_2980430_5 PFAM type II secretion system K02653 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004082 594.0
DYD1_k127_2980430_6 First step of the lipid cycle reactions in the biosynthesis of the cell wall peptidoglycan K01000 - 2.7.8.13 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001555 579.0
DYD1_k127_2980430_7 Essential cell division protein that forms a contractile ring structure (Z ring) at the future cell division site. The regulation of the ring assembly controls the timing and the location of cell division. One of the functions of the FtsZ ring is to recruit other cell division proteins to the septum to produce a new cell wall between the dividing cells. Binds GTP and shows GTPase activity K03531 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004114 554.0
DYD1_k127_2980430_8 Peptidoglycan polymerase that is essential for cell division K03588 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001786 553.0
DYD1_k127_2980430_9 Catalyzes two activities which are involved in the cyclic version of arginine biosynthesis the synthesis of N- acetylglutamate from glutamate and acetyl-CoA as the acetyl donor, and of ornithine by transacetylation between N(2)-acetylornithine and glutamate K00620 - 2.3.1.1,2.3.1.35 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001099 530.0
DYD1_k127_2984992_0 PFAM multicopper oxidase type K04753,K08100,K14588 - 1.3.3.5 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001663 433.0
DYD1_k127_2984992_1 L,D-transpeptidase catalytic domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003131 426.0
DYD1_k127_2984992_10 - - - - 0.00000000000000000000000000000000000000000000009285 172.0
DYD1_k127_2984992_11 helix_turn_helix, mercury resistance - - - 0.0000000000000000000000000000003545 127.0
DYD1_k127_2984992_12 LTXXQ motif family protein - - - 0.00000000000000000000000000000848 129.0
DYD1_k127_2984992_13 - - - - 0.0000000000000000000000001239 115.0
DYD1_k127_2984992_14 Short C-terminal domain K08982 - - 0.00000000000000004446 91.0
DYD1_k127_2984992_15 NfeD-like C-terminal, partner-binding K07403 - - 0.0000000135 62.0
DYD1_k127_2984992_16 Copper binding periplasmic protein CusF K07810 GO:0003674,GO:0005488,GO:0005507,GO:0005575,GO:0005623,GO:0006873,GO:0006875,GO:0006878,GO:0006950,GO:0008150,GO:0009636,GO:0009987,GO:0010035,GO:0010038,GO:0010043,GO:0010272,GO:0010273,GO:0016530,GO:0016531,GO:0019725,GO:0030003,GO:0030288,GO:0030313,GO:0031975,GO:0042221,GO:0042592,GO:0042597,GO:0043167,GO:0043169,GO:0044464,GO:0046688,GO:0046872,GO:0046914,GO:0046916,GO:0048878,GO:0050801,GO:0050896,GO:0055065,GO:0055070,GO:0055076,GO:0055080,GO:0055082,GO:0061687,GO:0065007,GO:0065008,GO:0097501,GO:0098754,GO:0098771,GO:0140104,GO:1990169 - 0.0000005213 61.0
DYD1_k127_2984992_17 Copper binding periplasmic protein CusF K07810 - - 0.0000008943 55.0
DYD1_k127_2984992_2 PFAM multicopper oxidase type K04753,K08100,K14588 - 1.3.3.5 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001573 385.0
DYD1_k127_2984992_3 Component of the ubiquinol-cytochrome c reductase complex (complex III or cytochrome b-c1 complex), which is a respiratory chain that generates an electrochemical potential coupled to ATP synthesis K00411 - 1.10.2.2 0.00000000000000000000000000000000000000000000000000000000000000000000000005273 254.0
DYD1_k127_2984992_4 Has an important function as a repair enzyme for proteins that have been inactivated by oxidation. Catalyzes the reversible oxidation-reduction of methionine sulfoxide in proteins to methionine K07304 - 1.8.4.11 0.000000000000000000000000000000000000000000000000000000000000000000003367 241.0
DYD1_k127_2984992_5 heavy metal translocating P-type ATPase K17686 - 3.6.3.54 0.0000000000000000000000000000000000000000000000000000000000000000001112 238.0
DYD1_k127_2984992_6 Required for disulfide bond formation in some periplasmic proteins. Acts by transferring its disulfide bond to other proteins and is reduced in the process K03981 - 5.3.4.1 0.000000000000000000000000000000000000000000000000000000000000000003928 235.0
DYD1_k127_2984992_7 protocatechuate 3,4-dioxygenase activity K03381 - 1.13.11.1 0.0000000000000000000000000000000000000000000000000000000000000004866 225.0
DYD1_k127_2984992_8 Antioxidant protein with alkyl hydroperoxidase activity. Required for the reduction of the AhpC active site cysteine residues and for the regeneration of the AhpC enzyme activity - - - 0.00000000000000000000000000000000000000000000000000000001114 203.0
DYD1_k127_2984992_9 Catalyzes the irreversible transfer of a propylamine group from the amino donor S-adenosylmethioninamine (decarboxy- AdoMet) to putrescine (1,4-diaminobutane) to yield spermidine K00797 - 2.5.1.16 0.00000000000000000000000000000000000000000000000000000001409 207.0
DYD1_k127_3086767_0 3-octaprenyl-4-hydroxybenzoate carboxy-lyase - - - 2.926e-219 688.0
DYD1_k127_3086767_1 Receptor family ligand binding region - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007276 565.0
DYD1_k127_3136802_0 Belongs to the heme-copper respiratory oxidase family K00404 - 1.9.3.1 1.119e-269 835.0
DYD1_k127_3136802_1 Function proposed based on presence of conserved amino acid motif, structural feature or limited homology K03821 - - 2.707e-243 765.0
DYD1_k127_3136802_10 'Cold-shock' DNA-binding domain - - - 0.000000000000000000000000000000638 124.0
DYD1_k127_3136802_11 Universal stress protein - - - 0.00000000000000000000000000005412 122.0
DYD1_k127_3136802_12 Protein required for attachment to host cells - - - 0.00000000000000000001579 97.0
DYD1_k127_3136802_13 cheY-homologous receiver domain - - - 0.0000000000004947 76.0
DYD1_k127_3136802_14 Prokaryotic cytochrome b561 - - - 0.0000000000281 72.0
DYD1_k127_3136802_15 Cbb3-type cytochrome oxidase K00407 - - 0.000000004566 59.0
DYD1_k127_3136802_16 Domain in cystathionine beta-synthase and other proteins. - - - 0.0001951 44.0
DYD1_k127_3136802_2 IG-like fold at C-terminal of FixG, putative oxidoreductase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009379 533.0
DYD1_k127_3136802_3 Ethylbenzene dehydrogenase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000186 529.0
DYD1_k127_3136802_4 C-type cytochrome. Part of the cbb3-type cytochrome c oxidase complex K00406 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009353 386.0
DYD1_k127_3136802_5 Iron-sulfur cluster-binding domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001015 336.0
DYD1_k127_3136802_6 Histidine kinase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006251 353.0
DYD1_k127_3136802_7 Cytochrome C oxidase, mono-heme subunit/FixO K00405 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002602 321.0
DYD1_k127_3136802_8 Bacterial regulatory proteins, luxR family - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000002247 265.0
DYD1_k127_3136802_9 Regulator K01420 - - 0.0000000000000000000000000000000000000000000000000000000000000000008844 237.0
DYD1_k127_319759_0 MmgE/PrpD family - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000003811 283.0
DYD1_k127_319759_1 COG3221 ABC-type phosphate phosphonate transport system, periplasmic component K02044 - - 0.0000000000000000000000000000000000000000000000000000002558 205.0
DYD1_k127_319759_2 His Kinase A (phosphoacceptor) domain - - - 0.00000000000000000000000000006595 130.0
DYD1_k127_319759_3 Putative diguanylate phosphodiesterase - - - 0.000003001 59.0
DYD1_k127_319759_4 - - - - 0.00002432 55.0
DYD1_k127_3215437_0 Sodium/hydrogen exchanger family K11105 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006868 429.0
DYD1_k127_3215437_1 ATP-dependent Clp protease adaptor protein ClpS - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007759 349.0
DYD1_k127_3215437_10 Major Facilitator Superfamily - - - 0.0000000000000000000000000000000000000001355 167.0
DYD1_k127_3215437_11 ORF6N domain - - - 0.0000000000000000000000000000000000000006072 154.0
DYD1_k127_3215437_12 PemK-like, MazF-like toxin of type II toxin-antitoxin system K07171 - - 0.000000000000000000000000000000000000002137 152.0
DYD1_k127_3215437_13 Belongs to the N-Me-Phe pilin family K02650 - - 0.00000000000000000000000000000002357 130.0
DYD1_k127_3215437_14 SpoIIAA-like - - - 0.00000000000000000000000000000006776 130.0
DYD1_k127_3215437_15 Cold shock K03704 - - 0.000000000000000000000003579 105.0
DYD1_k127_3215437_16 Transposase and inactivated derivatives K07497 - - 0.000000000000000002221 88.0
DYD1_k127_3215437_18 Protein of unknown function (DUF3018) - - - 0.00000003104 64.0
DYD1_k127_3215437_2 similarity to GP 17427840 - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001841 336.0
DYD1_k127_3215437_3 ADP-ribosylglycohydrolase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000001509 289.0
DYD1_k127_3215437_4 Zeta toxin - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000003481 276.0
DYD1_k127_3215437_5 Major Facilitator Superfamily - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000001492 269.0
DYD1_k127_3215437_6 cell redox homeostasis - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000313 256.0
DYD1_k127_3215437_7 - - - - 0.0000000000000000000000000000000000000000000000000000000001518 209.0
DYD1_k127_3215437_8 NUDIX domain - - - 0.000000000000000000000000000000000000000000000007392 176.0
DYD1_k127_3215437_9 Antitoxin Phd_YefM, type II toxin-antitoxin system - - - 0.00000000000000000000000000000000000000009638 154.0
DYD1_k127_3218508_0 damaged site, the DNA wraps around one UvrB monomer. DNA wrap is dependent on ATP binding by UvrB and probably causes local melting of the DNA helix, facilitating insertion of UvrB beta-hairpin between the DNA strands. Then UvrB probes one DNA strand for the presence of a lesion. If a lesion is found the UvrA subunits dissociate and the UvrB-DNA preincision complex is formed. This complex is subsequently bound by UvrC and the second UvrB is released. If no lesion is found, the DNA wraps around the other UvrB subunit that will check the other stand for damage K03702 - - 0.0 1074.0
DYD1_k127_3218508_1 Endoribonuclease that plays a central role in RNA processing and decay. Required for the maturation of 5S and 16S rRNAs and the majority of tRNAs. Also involved in the degradation of most mRNAs K08300 - 3.1.26.12 1.769e-276 876.0
DYD1_k127_3218508_10 Peptidase family S49 K04773 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001415 441.0
DYD1_k127_3218508_11 malonyl CoA-acyl carrier protein transacylase K00645 - 2.3.1.39 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001906 396.0
DYD1_k127_3218508_12 Responsible for synthesis of pseudouridine from uracil K06179 - 5.4.99.24 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001065 386.0
DYD1_k127_3218508_13 TatD related DNase K03424 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004085 375.0
DYD1_k127_3218508_14 Functions as a peptidoglycan terminase that cleaves nascent peptidoglycan strands endolytically to terminate their elongation K07082 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002537 363.0
DYD1_k127_3218508_15 protein conserved in bacteria K07793 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003155 368.0
DYD1_k127_3218508_16 Short-chain dehydrogenase reductase SDR K00059 GO:0003674,GO:0003824,GO:0006725,GO:0008150,GO:0008152,GO:0009987,GO:0010130,GO:0016043,GO:0016491,GO:0016614,GO:0016616,GO:0018913,GO:0018915,GO:0022607,GO:0042537,GO:0043933,GO:0044085,GO:0044237,GO:0051259,GO:0051260,GO:0051262,GO:0051289,GO:0055114,GO:0065003,GO:0071704,GO:0071840,GO:1901360 1.1.1.100 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000126 352.0
DYD1_k127_3218508_17 type I secretion membrane fusion K02022,K12537 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001521 331.0
DYD1_k127_3218508_18 Enoyl-CoA hydratase/isomerase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002357 322.0
DYD1_k127_3218508_19 HAD-superfamily hydrolase, subfamily IA, variant 1 K01091 - 3.1.3.18 0.00000000000000000000000000000000000000000000000000000000000000000000000000241 260.0
DYD1_k127_3218508_2 catalyzes the condensation reaction of fatty acid synthesis by the addition to an acyl acceptor of two carbons from malonyl-acp K00646,K09458 GO:0003674,GO:0003824,GO:0004312,GO:0004315,GO:0016740,GO:0016746,GO:0016747,GO:0033817 2.3.1.179 7.178e-203 641.0
DYD1_k127_3218508_20 PFAM Aminotransferase, class IV K02619 - 4.1.3.38 0.00000000000000000000000000000000000000000000000000000000000000000000000002476 266.0
DYD1_k127_3218508_21 Tetrapyrrole (Corrin/Porphyrin) Methylases K07056 - 2.1.1.198 0.000000000000000000000000000000000000000000000000000000000000000000001551 243.0
DYD1_k127_3218508_22 Phosphorylation of dTMP to form dTDP in both de novo and salvage pathways of dTTP synthesis K00943 - 2.7.4.9 0.000000000000000000000000000000000000000000000000000000000000000000005122 241.0
DYD1_k127_3218508_23 TIGRFAM DNA polymerase III, delta prime subunit K02341 - 2.7.7.7 0.00000000000000000000000000000000000000000000000000000000000000000005233 243.0
DYD1_k127_3218508_24 cell redox homeostasis - - - 0.0000000000000000000000000000000000000000000000000000000000000000000853 243.0
DYD1_k127_3218508_25 Maf-like protein K06287 - - 0.0000000000000000000000000000000000000000000000000000000001033 209.0
DYD1_k127_3218508_26 low molecular weight K01104 - 3.1.3.48 0.0000000000000000000000000000000000000000000000000000272 199.0
DYD1_k127_3218508_27 Tripartite tricarboxylate transporter family receptor - - - 0.000000000000000000000000000000000000000000003579 177.0
DYD1_k127_3218508_28 ankyrin repeat K06867 - - 0.000000000000000000000000000000000000000001293 166.0
DYD1_k127_3218508_29 HNH endonuclease - - - 0.0000000000000000000000000000000000000000163 161.0
DYD1_k127_3218508_3 Acyl-CoA dehydrogenase, middle domain K00252 - 1.3.8.6 5.054e-200 630.0
DYD1_k127_3218508_30 Carrier of the growing fatty acid chain in fatty acid biosynthesis K02078 - - 0.000000000000000000000000000000000007596 136.0
DYD1_k127_3218508_31 Protein of unknown function (DUF1178) - - - 0.000000000000000000000000000000000009511 143.0
DYD1_k127_3218508_32 Universal stress protein family - - - 0.0000000000000000000000000000000001207 137.0
DYD1_k127_3218508_33 Endonuclease Exonuclease Phosphatase - - - 0.0000000000000000000000000000000003822 151.0
DYD1_k127_3218508_34 Uncharacterized ACR, COG1399 K07040 - - 0.0000000000000000000000000000000005222 137.0
DYD1_k127_3218508_35 Haemolysin-type calcium-binding repeat (2 copies) - - - 0.00000000000000000000000000002281 136.0
DYD1_k127_3218508_36 Belongs to the bacterial ribosomal protein bL32 family K02911 - - 0.000000000000000000000000001764 111.0
DYD1_k127_3218508_37 His Kinase A (phosphoacceptor) domain - - - 0.000000000000000000000001868 119.0
DYD1_k127_3218508_38 - - - - 0.00000006065 59.0
DYD1_k127_3218508_39 COG0526, thiol-disulfide isomerase and thioredoxins - - - 0.000002018 52.0
DYD1_k127_3218508_4 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain K00074 - 1.1.1.157 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000125 599.0
DYD1_k127_3218508_5 Aminotransferase class I and II K00832 - 2.6.1.57 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002403 536.0
DYD1_k127_3218508_6 Belongs to the thiolase family K00626 - 2.3.1.9 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003516 522.0
DYD1_k127_3218508_7 Type I secretion system K16299 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002016 514.0
DYD1_k127_3218508_8 Catalyzes the condensation reaction of fatty acid synthesis by the addition to an acyl acceptor of two carbons from malonyl-ACP. Catalyzes the first condensation reaction which initiates fatty acid synthesis and may therefore play a role in governing the total rate of fatty acid production. Possesses both acetoacetyl-ACP synthase and acetyl transacylase activities. Its substrate specificity determines the biosynthesis of branched- chain and or straight-chain of fatty acids K00648 - 2.3.1.180 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002326 487.0
DYD1_k127_3218508_9 Catalyzes the reversible formation of acyl-phosphate (acyl-PO(4)) from acyl- acyl-carrier-protein (acyl-ACP). This enzyme utilizes acyl-ACP as fatty acyl donor, but not acyl-CoA K03621 - 2.3.1.15 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004661 470.0
DYD1_k127_3228602_0 The central subunit of the protein translocation channel SecYEG. Consists of two halves formed by TMs 1-5 and 6-10. These two domains form a lateral gate at the front which open onto the bilayer between TMs 2 and 7, and are clamped together by SecE at the back. The channel is closed by both a pore ring composed of hydrophobic SecY resides and a short helix (helix 2A) on the extracellular side of the membrane which forms a plug. The plug probably moves laterally to allow the channel to open. The ring and the pore may move independently K03076 - - 1.732e-220 699.0
DYD1_k127_3228602_1 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain K01652 - 2.2.1.6 8.518e-201 641.0
DYD1_k127_3228602_10 MOSC domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009359 366.0
DYD1_k127_3228602_11 C-terminal domain of 1-Cys peroxiredoxin - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001504 364.0
DYD1_k127_3228602_12 One of the primary rRNA binding proteins, it binds directly to 16S rRNA where it nucleates assembly of the body of the 30S subunit K02986 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003221 333.0
DYD1_k127_3228602_13 MotA TolQ ExbB proton channel family - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007096 344.0
DYD1_k127_3228602_14 PFAM Serine threonine-protein kinase-like domain K12132 - 2.7.11.1 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006384 334.0
DYD1_k127_3228602_15 Zinc-binding dehydrogenase K00344 - 1.6.5.5 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001132 329.0
DYD1_k127_3228602_16 Class II Aldolase and Adducin N-terminal domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000334 321.0
DYD1_k127_3228602_17 Aldo/keto reductase family K05275 - 1.1.1.65 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000141 321.0
DYD1_k127_3228602_18 Located at the back of the 30S subunit body where it stabilizes the conformation of the head with respect to the body K02988 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000004105 280.0
DYD1_k127_3228602_19 Mandelate racemase / muconate lactonizing enzyme, C-terminal domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000003394 286.0
DYD1_k127_3228602_2 Acyl-CoA dehydrogenase, C-terminal domain K00248 - 1.3.8.1 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001507 566.0
DYD1_k127_3228602_20 dehydratase K18290 - 4.2.1.56 0.00000000000000000000000000000000000000000000000000000000000000000000000000000005043 270.0
DYD1_k127_3228602_21 Tripartite tricarboxylate transporter family receptor - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000001562 276.0
DYD1_k127_3228602_22 This protein binds to the 23S rRNA, and is important in its secondary structure. It is located near the subunit interface in the base of the L7 L12 stalk, and near the tRNA binding site of the peptidyltransferase center K02933 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000001651 254.0
DYD1_k127_3228602_23 S-adenosyl-l-methionine hydroxide adenosyltransferase K22205 - - 0.000000000000000000000000000000000000000000000000000000000000000000000002755 250.0
DYD1_k127_3228602_24 D-alanyl-D-alanine carboxypeptidase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000005637 246.0
DYD1_k127_3228602_25 Located on the platform of the 30S subunit, it bridges several disparate RNA helices of the 16S rRNA. Forms part of the Shine-Dalgarno cleft in the 70S ribosome K02948 - - 0.00000000000000000000000000000000000000000000000000000000000000000002366 233.0
DYD1_k127_3228602_26 Acyl-CoA dehydrogenase, N-terminal domain - - - 0.0000000000000000000000000000000000000000000000000000000000000004797 240.0
DYD1_k127_3228602_27 Ribosomal protein L17 K02879 - - 0.0000000000000000000000000000000000000000000000000000000000002124 215.0
DYD1_k127_3228602_28 Ribosomal proteins 50S-L15, 50S-L18e, 60S-L27A K02876 - - 0.00000000000000000000000000000000000000000000000000000009917 199.0
DYD1_k127_3228602_29 MmgE PrpD family protein - - - 0.0000000000000000000000000000000000000000000000000000179 205.0
DYD1_k127_3228602_3 Amidohydrolase K03392,K10220 - 4.1.1.45,4.2.1.83 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003116 540.0
DYD1_k127_3228602_30 Located at the top of the head of the 30S subunit, it contacts several helices of the 16S rRNA. In the 70S ribosome it contacts the 23S rRNA (bridge B1a) and protein L5 of the 50S subunit (bridge B1b), connecting the 2 subunits K02952 - - 0.0000000000000000000000000000000000000000000000000001858 188.0
DYD1_k127_3228602_31 Serine aminopeptidase, S33 - - - 0.0000000000000000000000000000000000000000000000004486 192.0
DYD1_k127_3228602_32 (GGDEF) domain - - - 0.00000000000000000000000000000000000000000000159 178.0
DYD1_k127_3228602_33 Acetyltransferase (GNAT) domain - - - 0.000000000000000000000000000000000000000000004029 171.0
DYD1_k127_3228602_34 Domain in cystathionine beta-synthase and other proteins. - - - 0.00000000000000000000000000000000000000000006127 164.0
DYD1_k127_3228602_35 Bacterial extracellular solute-binding protein K22003 - 5.3.3.7 0.0000000000000000000000000000000000000000001339 170.0
DYD1_k127_3228602_36 This is one of the proteins that binds and probably mediates the attachment of the 5S RNA into the large ribosomal subunit, where it forms part of the central protuberance K02881 - - 0.0000000000000000000000000000000000000006579 154.0
DYD1_k127_3228602_37 One of the essential components for the initiation of protein synthesis. Stabilizes the binding of IF-2 and IF-3 on the 30S subunit to which N-formylmethionyl-tRNA(fMet) subsequently binds. Helps modulate mRNA selection, yielding the 30S pre- initiation complex (PIC). Upon addition of the 50S ribosomal subunit IF-1, IF-2 and IF-3 are released leaving the mature 70S translation initation complex K02518 - - 0.00000000000000000000000000000000001254 143.0
DYD1_k127_3228602_38 Universal stress protein - - - 0.000000000000000000000000000001125 126.0
DYD1_k127_3228602_39 Class ii aldolase K01628 - 4.1.2.17 0.00000000000000000000000000007245 126.0
DYD1_k127_3228602_4 DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates K03040 GO:0003674,GO:0003824,GO:0003899,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006139,GO:0006351,GO:0006354,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0016070,GO:0016740,GO:0016772,GO:0016779,GO:0018130,GO:0019438,GO:0032774,GO:0034062,GO:0034641,GO:0034645,GO:0034654,GO:0043170,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044271,GO:0044424,GO:0044464,GO:0046483,GO:0071704,GO:0090304,GO:0097659,GO:0097747,GO:0140098,GO:1901360,GO:1901362,GO:1901576 2.7.7.6 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003217 509.0
DYD1_k127_3228602_40 Ribosomal protein L30p/L7e K02907 - - 0.00000000000000000001603 94.0
DYD1_k127_3228602_41 Phospholipase_D-nuclease N-terminal - - - 0.0000000000000000006966 91.0
DYD1_k127_3228602_42 protein kinase activity - - - 0.00000000000000001308 97.0
DYD1_k127_3228602_43 PFAM Uncharacterised ACR, YagE family COG1723 - - - 0.00000000000005456 74.0
DYD1_k127_3228602_44 - - - - 0.000000000005728 76.0
DYD1_k127_3228602_45 Sel1-like repeats. - - - 0.00000000001907 73.0
DYD1_k127_3228602_46 Belongs to the bacterial ribosomal protein bL36 family K02919 - - 0.00000000005058 66.0
DYD1_k127_3228602_47 One of the primary rRNA binding proteins, it binds directly to 16S rRNA central domain where it helps coordinate assembly of the platform of the 30S subunit K02994 - - 0.00000002262 55.0
DYD1_k127_3228602_5 CoA-transferase family III - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002436 488.0
DYD1_k127_3228602_6 MmgE/PrpD family - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001657 495.0
DYD1_k127_3228602_7 epimerase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009972 407.0
DYD1_k127_3228602_8 Taurine catabolism dioxygenase TauD, TfdA family K06912 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001183 404.0
DYD1_k127_3228602_9 abc transporter K02065 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002559 389.0
DYD1_k127_3242559_0 Inactivates the type B streptogramin antibiotics by linearizing the lactone ring at the ester linkage, generating a free phenylglycine carboxylate and converting the threonyl moiety into 2-amino-butenoic acid K18235 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001343 550.0
DYD1_k127_3242559_1 XdhC Rossmann domain K07402 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000002781 263.0
DYD1_k127_3242559_2 Tripartite tricarboxylate transporter family receptor - - - 0.00000000000000000000000000000000000000000000000000000000000000000001191 246.0
DYD1_k127_3242559_3 Protein of unknown function (DUF3014) - - - 0.0000000000000000000000000000000000000000000000000000000000000002691 229.0
DYD1_k127_3242559_4 XdhC and CoxI family - - - 0.0000000000000000000000000000000000002364 144.0
DYD1_k127_3242559_5 DoxX K15977 - - 0.0000000000000005903 78.0
DYD1_k127_3242559_6 spore germination - - - 0.00000002016 65.0
DYD1_k127_3242559_7 - - - - 0.0001803 47.0
DYD1_k127_324903_0 that it carries out the mismatch recognition step. This protein has a weak ATPase activity K03555 - - 0.0 1056.0
DYD1_k127_324903_1 Acts as a magnesium transporter K06213 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003212 477.0
DYD1_k127_324903_10 Peptidyl-prolyl cis-trans isomerase K03775 - 5.2.1.8 0.00000000000000000000000000000000000000000000000000000000000864 214.0
DYD1_k127_324903_11 alkyl hydroperoxide reductase Thiol specific antioxidant Mal allergen K03564 - 1.11.1.15 0.00000000000000000000000000000000000000000000000000000001503 206.0
DYD1_k127_324903_12 Belongs to the UPF0255 family - - - 0.00000000000000000000000000000000000000000000000000003441 203.0
DYD1_k127_324903_13 - - - - 0.00000000000000000000000000000000000000000000000007225 193.0
DYD1_k127_324903_14 Antibiotic biosynthesis monooxygenase - - - 0.00000000000000000000000000000000000000000000001328 173.0
DYD1_k127_324903_15 RNA methyltransferase, TrmH family, group 1 K02533 - - 0.0000000000000000000000000000001802 126.0
DYD1_k127_324903_16 - - - - 0.00000000000000000000000000005203 122.0
DYD1_k127_324903_17 Anaphase promoting complex subunit 8 / Cdc23 K03355 - - 0.0000003453 60.0
DYD1_k127_324903_2 Catalyzes the condensation of (S)-aspartate-beta- semialdehyde (S)-ASA and pyruvate to 4-hydroxy- tetrahydrodipicolinate (HTPA) K01714 - 4.3.3.7 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001692 449.0
DYD1_k127_324903_3 (Lipo)protein K07287 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008556 430.0
DYD1_k127_324903_4 A domain family that is part of the cupin metalloenzyme superfamily. K18850 - 1.14.11.47 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000022 398.0
DYD1_k127_324903_5 Inositol monophosphatase K01092 - 3.1.3.25 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002261 386.0
DYD1_k127_324903_6 PFAM beta-lactamase domain protein - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000001058 303.0
DYD1_k127_324903_7 Saccharopine dehydrogenase C-terminal domain K00808 - 2.5.1.44 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000002548 278.0
DYD1_k127_324903_8 Methyltransferase type 11 - - - 0.000000000000000000000000000000000000000000000000000000000000002173 224.0
DYD1_k127_324903_9 alpha/beta hydrolase fold K01253 - 3.3.2.9 0.00000000000000000000000000000000000000000000000000000000000001424 226.0
DYD1_k127_3275481_0 PDZ DHR GLGF domain protein - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001645 351.0
DYD1_k127_3275481_1 PFAM amidohydrolase 2 - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000004685 289.0
DYD1_k127_3275481_2 X-Pro dipeptidyl-peptidase domain protein K06978 - - 0.000000000000000000000000000000000000000000000000000000000000000000001929 246.0
DYD1_k127_3275481_3 Tripartite tricarboxylate transporter family receptor - - - 0.0000000000000000000000000000000000000000000000000000000000000002036 233.0
DYD1_k127_3275481_4 Alpha/beta hydrolase family - - - 0.000000000000000000000000000000000001036 141.0
DYD1_k127_3275481_5 carboxymuconolactone decarboxylase - - - 0.00000000000000000000000000000005352 132.0
DYD1_k127_3275481_6 Protein conserved in bacteria - - - 0.00000001881 57.0
DYD1_k127_3344090_0 MmgE/PrpD family - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007835 599.0
DYD1_k127_3344090_1 MmgE PrpD family protein - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001459 441.0
DYD1_k127_3344090_2 Catalyzes the isomerization between 2-isopropylmalate and 3-isopropylmalate, via the formation of 2-isopropylmaleate K01703 - 4.2.1.33,4.2.1.35 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009477 359.0
DYD1_k127_3344090_3 mandelate racemase muconate lactonizing K01856,K02549 - 4.2.1.113,5.5.1.1 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007172 355.0
DYD1_k127_3344090_4 Protein conserved in bacteria - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004258 314.0
DYD1_k127_3344090_5 FAD dependent oxidoreductase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000179 295.0
DYD1_k127_3344090_6 PFAM conserved - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000001328 297.0
DYD1_k127_3344090_7 Phosphoenolpyruvate phosphomutase K20454 - 4.1.3.32 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000004546 282.0
DYD1_k127_3344090_8 Catalyzes the isomerization between 2-isopropylmalate and 3-isopropylmalate, via the formation of 2-isopropylmaleate K01704 - 4.2.1.33,4.2.1.35 0.0000000000000000000000000000000001373 139.0
DYD1_k127_3360249_0 AI-2E family transporter K03548 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003261 420.0
DYD1_k127_3360249_1 PFAM Uracil-DNA glycosylase superfamily K10800 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001049 318.0
DYD1_k127_3360249_2 NmrA-like family K00329,K00356 - 1.6.5.3,1.6.99.3 0.00000000000000000000000000000000000000000000000000000000006319 216.0
DYD1_k127_3360249_3 acyl-CoA dehydrogenase activity K00248,K00249 - 1.3.8.1,1.3.8.7 0.0000000000000000000000000000000000000000000001814 185.0
DYD1_k127_3360249_4 AhpC/TSA family - - - 0.000000000000000000000000000000000000000144 154.0
DYD1_k127_3360249_5 ABC-type Fe3 transport system permease component K02011 - - 0.00000000000000006773 87.0
DYD1_k127_3360249_7 Bacterial extracellular solute-binding protein - - - 0.000000000002037 79.0
DYD1_k127_336911_0 Catalyzes the attachment of proline to tRNA(Pro) in a two-step reaction proline is first activated by ATP to form Pro- AMP and then transferred to the acceptor end of tRNA(Pro). As ProRS can inadvertently accommodate and process non-cognate amino acids such as alanine and cysteine, to avoid such errors it has two additional distinct editing activities against alanine. One activity is designated as 'pretransfer' editing and involves the tRNA(Pro)-independent hydrolysis of activated Ala-AMP. The other activity is designated 'posttransfer' editing and involves deacylation of mischarged Ala-tRNA(Pro). The misacylated Cys- tRNA(Pro) is not edited by ProRS K01881 - 6.1.1.15 2.369e-261 815.0
DYD1_k127_336911_1 Cysteine-rich domain - - - 8.49e-231 721.0
DYD1_k127_336911_10 Accelerates the degradation of transcripts by removing pyrophosphate from the 5'-end of triphosphorylated RNA, leading to a more labile monophosphorylated state that can stimulate subsequent ribonuclease cleavage K08311 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000003004 290.0
DYD1_k127_336911_11 Spermidine synthase K00797 - 2.5.1.16 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000002453 287.0
DYD1_k127_336911_12 Belongs to the WrbA family K03809 - 1.6.5.2 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000004466 277.0
DYD1_k127_336911_13 Transglycosylase SLT domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000008752 272.0
DYD1_k127_336911_14 Rubrerythrin - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000001056 258.0
DYD1_k127_336911_15 Protein of unknown function (DUF3501) - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000242 262.0
DYD1_k127_336911_16 N-acetylmuramoyl-L-alanine amidase (Family 2) K03806 GO:0000270,GO:0003674,GO:0003824,GO:0005488,GO:0005575,GO:0006022,GO:0006026,GO:0006027,GO:0006807,GO:0008150,GO:0008152,GO:0008270,GO:0008745,GO:0009056,GO:0009057,GO:0009253,GO:0009254,GO:0009392,GO:0016020,GO:0016787,GO:0016810,GO:0016811,GO:0019867,GO:0030203,GO:0043167,GO:0043169,GO:0043170,GO:0046872,GO:0046914,GO:0061783,GO:0071704,GO:1901135,GO:1901136,GO:1901564,GO:1901565,GO:1901575 3.5.1.28 0.0000000000000000000000000000000000000000000000000000000000000000000000003034 252.0
DYD1_k127_336911_17 - - - - 0.00000000000000000000000000000000000000000000000000000000001615 216.0
DYD1_k127_336911_18 Provides the precursors necessary for DNA synthesis. Catalyzes the biosynthesis of deoxyribonucleotides from the corresponding ribonucleotides K00525 GO:0000166,GO:0003674,GO:0003824,GO:0004748,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005971,GO:0006139,GO:0006725,GO:0006753,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009117,GO:0009165,GO:0009262,GO:0009263,GO:0009987,GO:0016491,GO:0016725,GO:0016728,GO:0018130,GO:0019438,GO:0019637,GO:0032991,GO:0034641,GO:0034654,GO:0036094,GO:0042802,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0044424,GO:0044444,GO:0044445,GO:0044464,GO:0046483,GO:0055086,GO:0055114,GO:0061731,GO:0071704,GO:0090407,GO:0097159,GO:1901135,GO:1901137,GO:1901265,GO:1901293,GO:1901360,GO:1901362,GO:1901363,GO:1901576,GO:1902494,GO:1990204 1.17.4.1 0.000000000000000000000000000000000000000000000000393 180.0
DYD1_k127_336911_19 This protein binds to 23S rRNA in the presence of protein L20 K02888 - - 0.00000000000000000000000000000000000000002086 159.0
DYD1_k127_336911_2 response regulator K02667 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006857 562.0
DYD1_k127_336911_20 Belongs to the bacterial ribosomal protein bL27 family K02899 - - 0.00000000000000000000000000000000000149 139.0
DYD1_k127_336911_21 CNP1-like family - - - 0.000000000000000000000000000000008874 136.0
DYD1_k127_336911_22 Protein of unknown function (DUF2905) - - - 0.000000000000000000000004061 102.0
DYD1_k127_336911_23 - K06950 - - 0.00000000000444 68.0
DYD1_k127_336911_24 Asparaginyl-tRNA synthetase K01893 GO:0003674,GO:0003824,GO:0004812,GO:0004816,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006082,GO:0006139,GO:0006399,GO:0006412,GO:0006418,GO:0006421,GO:0006518,GO:0006520,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0016070,GO:0016874,GO:0016875,GO:0019538,GO:0019752,GO:0034641,GO:0034645,GO:0034660,GO:0043038,GO:0043039,GO:0043043,GO:0043170,GO:0043436,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044281,GO:0044424,GO:0044464,GO:0046483,GO:0071704,GO:0090304,GO:0140098,GO:0140101,GO:1901360,GO:1901564,GO:1901566,GO:1901576 6.1.1.22 0.00001041 48.0
DYD1_k127_336911_3 Catalyzes the transfer of a phosphate group to glutamate to form L-glutamate 5-phosphate K00931 - 2.7.2.11 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003249 541.0
DYD1_k127_336911_4 An essential GTPase which binds GTP, GDP and possibly (p)ppGpp with moderate affinity, with high nucleotide exchange rates and a fairly low GTP hydrolysis rate. Plays a role in control of the cell cycle, stress response, ribosome biogenesis and in those bacteria that undergo differentiation, in morphogenesis control K03979 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004364 509.0
DYD1_k127_336911_5 Catalyzes the condensation of the acetyl group of acetyl-CoA with 3-methyl-2-oxobutanoate (2-oxoisovalerate) to form 3-carboxy-3-hydroxy-4-methylpentanoate (2-isopropylmalate) K01649 - 2.3.3.13 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005506 470.0
DYD1_k127_336911_6 Signal transduction histidine kinase, subgroup 1, dimerisation phosphoacceptor K02668 - 2.7.13.3 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008147 457.0
DYD1_k127_336911_7 Mycolic acid cyclopropane synthetase K00574 - 2.1.1.79 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001587 446.0
DYD1_k127_336911_8 Belongs to the FPP GGPP synthase family K02523 - 2.5.1.90 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000017 430.0
DYD1_k127_336911_9 Virulence factor BrkB K07058 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004466 361.0
DYD1_k127_336971_0 Histidine kinase K07636 - 2.7.13.3 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005418 501.0
DYD1_k127_336971_1 Is probably a protein kinase regulator of UbiI activity which is involved in aerobic coenzyme Q (ubiquinone) biosynthesis K03688 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008001 477.0
DYD1_k127_336971_10 protein conserved in archaea - - - 0.000000000000000000000000000000002174 136.0
DYD1_k127_336971_11 Protein of unknown function (DUF2817) - - - 0.0000000002711 66.0
DYD1_k127_336971_2 7 transmembrane helices usually fused to an inactive transglutaminase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003813 415.0
DYD1_k127_336971_3 - - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001528 398.0
DYD1_k127_336971_4 Transcriptional regulatory protein, C terminal K07657 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001273 361.0
DYD1_k127_336971_5 Sugar-transfer associated ATP-grasp - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006395 383.0
DYD1_k127_336971_6 Methyltransferase required for the conversion of demethylmenaquinol (DMKH2) to menaquinol (MKH2) and the conversion of 2-polyprenyl-6-methoxy-1,4-benzoquinol (DDMQH2) to 2- polyprenyl-3-methyl-6-methoxy-1,4-benzoquinol (DMQH2) K03183 - 2.1.1.163,2.1.1.201 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001566 353.0
DYD1_k127_336971_7 Protein of unknown function (DUF971) - - - 0.000000000000000000000000000000000000000000000000000000000005845 209.0
DYD1_k127_336971_8 Histidine triad (Hit) protein - - - 0.000000000000000000000000000000000000000000007667 169.0
DYD1_k127_336971_9 protein conserved in bacteria K03690 - - 0.00000000000000000000000000000000000000008903 158.0
DYD1_k127_338665_0 TIGRFAM ATPase, P-type, K Mg Cd Cu Zn Na Ca Na H-transporter K01539 - 3.6.3.9 0.0 1017.0
DYD1_k127_338665_1 Cytochrome c-type biogenesis protein CcmF K02198 - - 1.454e-291 915.0
DYD1_k127_338665_10 Catalyzes the isomerization of sedoheptulose 7-phosphate in D-glycero-D-manno-heptose 7-phosphate K03271 - 5.3.1.28 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000002174 301.0
DYD1_k127_338665_11 Tetratricopeptide repeat K02200 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000246 304.0
DYD1_k127_338665_12 Cytochrome c554 and c-prime - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000001076 292.0
DYD1_k127_338665_13 Required for the export of heme to the periplasm for the biogenesis of c-type cytochromes K02194 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000002306 273.0
DYD1_k127_338665_14 LppC putative lipoprotein K07121 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000001239 270.0
DYD1_k127_338665_15 4Fe-4S binding domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000009107 253.0
DYD1_k127_338665_16 Catalyzes the ADP transfer from ATP to D-glycero-beta-D- manno-heptose 1-phosphate, yielding ADP-D-glycero-beta-D-manno- heptose K21345 - 2.7.7.70 0.000000000000000000000000000000000000000000000000000000000000000000002652 241.0
DYD1_k127_338665_17 oxidoreductase DsbE K02199 - - 0.00000000000000000000000000000000000000000000000000000000000000000003583 236.0
DYD1_k127_338665_18 PFAM transport-associated - - - 0.0000000000000000000000000000000000000000000000000000000000000008269 223.0
DYD1_k127_338665_19 Pyroglutamyl peptidase K01304 - 3.4.19.3 0.00000000000000000000000000000000000000000000000000000000000004405 223.0
DYD1_k127_338665_2 tRNA synthetases class I (E and Q), anti-codon binding domain K01886 - 6.1.1.18 2.785e-285 885.0
DYD1_k127_338665_20 Heme chaperone required for the biogenesis of c-type cytochromes. Transiently binds heme delivered by CcmC and transfers the heme to apo-cytochromes in a process facilitated by CcmF and CcmH K02197 - - 0.0000000000000000000000000000000000000000000000000000000000001558 219.0
DYD1_k127_338665_21 Catalyzes the phosphorylation of pantothenate (Pan), the first step in CoA biosynthesis K01947,K03525 - 2.7.1.33,6.3.4.15 0.000000000000000000000000000000000000000000000000000000000001104 222.0
DYD1_k127_338665_22 once thought to export heme, this seems not to be the case, but its exact role is uncertain. Responsible for energy coupling to the transport system K02193 - 3.6.3.41 0.000000000000000000000000000000000000000000000000000000004183 205.0
DYD1_k127_338665_23 - - - - 0.000000000000000000000000000000000000000000000000000004595 199.0
DYD1_k127_338665_24 Cyclic nucleotide-monophosphate binding domain K21563 - - 0.00000000000000000000000000000000000000000000000436 182.0
DYD1_k127_338665_25 cytochrome c5 - - - 0.0000000000000000000000000000000000000000000005534 180.0
DYD1_k127_338665_26 subunit of a heme lyase K02200 - - 0.0000000000000000000000000000000000000000000005939 171.0
DYD1_k127_338665_27 Cytochrome c - - - 0.00000000000000000000000000000000003751 147.0
DYD1_k127_338665_28 Belongs to the TPP enzyme family - - - 0.000000000000000000000000000001013 135.0
DYD1_k127_338665_29 PFAM Sporulation domain protein - - - 0.000000000000000000000000000004629 130.0
DYD1_k127_338665_3 COG0457 FOG TPR repeat - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001534 587.0
DYD1_k127_338665_30 Belongs to the UPF0102 family K07460 - - 0.000000000000000000000000000109 120.0
DYD1_k127_338665_31 Cytochrome C oxidase, cbb3-type, subunit III - - - 0.0000000000000000000000001427 121.0
DYD1_k127_338665_32 Catalyzes the reduction of nitrite to ammonia, consuming six electrons in the process K04013,K15876 - - 0.00000000000000000000001554 112.0
DYD1_k127_338665_33 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain - - - 0.0000000000000000000001563 104.0
DYD1_k127_338665_34 - - - - 0.000000000000000000001506 107.0
DYD1_k127_338665_35 COG2863 Cytochrome c553 - - - 0.0000000000000000004176 100.0
DYD1_k127_338665_36 Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family - - - 0.000000000000002122 82.0
DYD1_k127_338665_37 Cytochrome c7 and related cytochrome c - - - 0.000000000001493 70.0
DYD1_k127_338665_38 Required for the export of heme to the periplasm for the biogenesis of c-type cytochromes K02196 - - 0.00000000001318 70.0
DYD1_k127_338665_39 Carboxymuconolactone decarboxylase family - - - 0.00000002209 60.0
DYD1_k127_338665_4 Putative outer membrane beta-barrel porin, MtrB/PioB - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005357 457.0
DYD1_k127_338665_40 PFAM Carboxymuconolactone decarboxylase - - - 0.00000005169 63.0
DYD1_k127_338665_41 Antioxidant protein with alkyl hydroperoxidase activity. Required for the reduction of the AhpC active site cysteine residues and for the regeneration of the AhpC enzyme activity - - - 0.00002568 49.0
DYD1_k127_338665_5 Catalyzes the reversible cyclization of carbamoyl aspartate to dihydroorotate K01465 - 3.5.2.3 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002027 436.0
DYD1_k127_338665_6 Required for the export of heme to the periplasm for the biogenesis of c-type cytochromes K02195 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004527 400.0
DYD1_k127_338665_7 Catalyzes the 2'-O-methylation of the ribose of cytidine 1402 (C1402) in 16S rRNA K07056 - 2.1.1.198 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001016 339.0
DYD1_k127_338665_8 PFAM Polysulphide reductase, NrfD - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000064 315.0
DYD1_k127_338665_9 Acts both as a biotin-- acetyl-CoA-carboxylase ligase and a repressor K03524 - 6.3.4.15 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000006209 304.0
DYD1_k127_346583_0 Involved in mRNA degradation. Catalyzes the phosphorolysis of single-stranded polyribonucleotides processively in the 3'- to 5'-direction K00962 - 2.7.7.8 0.0 1059.0
DYD1_k127_346583_1 Responsible for synthesis of pseudouridine from uracil- 55 in the psi GC loop of transfer RNAs K03177 - 5.4.99.25 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000001663 303.0
DYD1_k127_346583_10 - - - - 0.000000152 55.0
DYD1_k127_346583_2 Required for rescue of stalled ribosomes mediated by trans-translation. Binds to transfer-messenger RNA (tmRNA), required for stable association of tmRNA with ribosomes. tmRNA and SmpB together mimic tRNA shape, replacing the anticodon stem-loop with SmpB. tmRNA is encoded by the ssrA gene K03664 - - 0.000000000000000000000000000000000000000000000000000000000000000001203 230.0
DYD1_k127_346583_3 Transcription factor that acts by binding directly to the RNA polymerase (RNAP). Required for negative regulation of rRNA expression and positive regulation of several amino acid biosynthesis promoters K06204 - - 0.000000000000000000000000000000000000000000000000000000000000000002331 228.0
DYD1_k127_346583_4 Oligoketide cyclase lipid transport protein - - - 0.00000000000000000000000000000000000000000000000000004414 191.0
DYD1_k127_346583_5 Forms an intersubunit bridge (bridge B4) with the 23S rRNA of the 50S subunit in the ribosome K02956 - - 0.000000000000000000000000000000000003744 138.0
DYD1_k127_346583_6 Belongs to the UPF0125 (RnfH) family K09801 - - 0.000000000000000000003052 98.0
DYD1_k127_346583_7 One of several proteins that assist in the late maturation steps of the functional core of the 30S ribosomal subunit. Associates with free 30S ribosomal subunits (but not with 30S subunits that are part of 70S ribosomes or polysomes). Required for efficient processing of 16S rRNA. May interact with the 5'-terminal helix region of 16S rRNA K02834 - - 0.000000000000000815 78.0
DYD1_k127_346583_8 Domain of unknown function (DUF4124) - - - 0.00000000000142 75.0
DYD1_k127_346583_9 Catalyzes the conversion of inosine 5'-phosphate (IMP) to xanthosine 5'-phosphate (XMP), the first committed and rate- limiting step in the de novo synthesis of guanine nucleotides, and therefore plays an important role in the regulation of cell growth K00088 - 1.1.1.205 0.0000000001983 63.0
DYD1_k127_3503340_0 DNA internalization-related competence protein ComEC Rec2 K02238 - - 4.277e-263 835.0
DYD1_k127_3503340_1 In eubacteria ppGpp (guanosine 3'-diphosphate 5-' diphosphate) is a mediator of the stringent response that coordinates a variety of cellular activities in response to changes in nutritional abundance K00951 - 2.7.6.5 4.707e-235 749.0
DYD1_k127_3503340_10 glycosylase K01246 - 3.2.2.20 0.00000000000000000000000000000000000000000000000000000000000000000000000000001754 264.0
DYD1_k127_3503340_11 DNA replication, recombination and repair K01247 - 3.2.2.21 0.00000000000000000000000000000000000000000000000000000000000000000003496 246.0
DYD1_k127_3503340_12 Conserved TM helix - - - 0.0000000000000000000000000000000000000000000000000000000000000000005112 237.0
DYD1_k127_3503340_13 Uncharacterized protein conserved in bacteria (DUF2062) K09928 - - 0.000000000000000000000000000000000000000000000000000000000000201 218.0
DYD1_k127_3503340_14 Protein conserved in bacteria - - - 0.0000000000000000000000000000000000000000000000000000000000002373 226.0
DYD1_k127_3503340_15 2-keto-4-pentenoate hydratase - - - 0.000000000000000000000000000000000000000000000000000000000007141 217.0
DYD1_k127_3503340_16 PFAM Formylglycine-generating sulfatase enzyme K18912,K20333 - 1.14.99.50 0.00000000000000000000000000000000000000000000000000000000008811 213.0
DYD1_k127_3503340_17 MgtE intracellular N domain - - - 0.0000000000000000000000000000000000000000006627 169.0
DYD1_k127_3503340_18 Circularly permuted ATP-grasp type 2 - - - 0.00000000000000000000000000000001795 141.0
DYD1_k127_3503340_19 Domain of unknown function (DUF1330) - - - 0.000000000000000000000000000003507 121.0
DYD1_k127_3503340_2 Belongs to the class-II aminoacyl-tRNA synthetase family K04567 - 6.1.1.6 1.45e-203 645.0
DYD1_k127_3503340_20 Protein of unknown function (DUF3568) - - - 0.0000000000000000000000006979 111.0
DYD1_k127_3503340_21 - - - - 0.00000000000000000000001207 113.0
DYD1_k127_3503340_22 - - - - 0.0003244 48.0
DYD1_k127_3503340_3 DHH family K07462 - - 2.392e-196 629.0
DYD1_k127_3503340_4 Peptide chain release factor 2 directs the termination of translation in response to the peptide chain termination codons UGA and UAA K02836 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001738 571.0
DYD1_k127_3503340_5 Belongs to the sodium neurotransmitter symporter (SNF) (TC 2.A.22) family K03308 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002761 546.0
DYD1_k127_3503340_6 TIGRFAM Lipoprotein releasing system, transmembrane protein, LolC E family K09808 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005579 519.0
DYD1_k127_3503340_7 Acetyl-coenzyme A synthetase N-terminus K01907 - 6.2.1.16 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002431 505.0
DYD1_k127_3503340_8 Acts as a magnesium transporter K06213 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000104 462.0
DYD1_k127_3503340_9 Part of the ABC transporter complex LolCDE involved in the translocation of mature outer membrane-directed lipoproteins, from the inner membrane to the periplasmic chaperone, LolA. Responsible for the formation of the LolA-lipoprotein complex in an ATP-dependent manner K09810 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007039 321.0
DYD1_k127_3514400_0 Aldehyde oxidase and xanthine dehydrogenase, a b hammerhead K03520 - 1.2.5.3 0.0 1058.0
DYD1_k127_3514400_1 major facilitator superfamily K03446 - - 3.569e-214 676.0
DYD1_k127_3514400_10 TIGRFAM TRAP transporter, 4TM 12TM fusion protein - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008852 425.0
DYD1_k127_3514400_11 D-isomer specific 2-hydroxyacid dehydrogenase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007418 401.0
DYD1_k127_3514400_12 Branched-chain amino acid transport system / permease component - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004588 366.0
DYD1_k127_3514400_13 Pfam:UPF0118 - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001019 368.0
DYD1_k127_3514400_14 Belongs to the HpcH HpaI aldolase family - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007078 364.0
DYD1_k127_3514400_15 Branched-chain amino acid transport system / permease component - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001085 362.0
DYD1_k127_3514400_16 ATPases associated with a variety of cellular activities K01996 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005774 351.0
DYD1_k127_3514400_17 PFAM amidohydrolase 2 - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001225 342.0
DYD1_k127_3514400_18 Major Facilitator Superfamily - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005069 340.0
DYD1_k127_3514400_19 Belongs to the CDP-alcohol phosphatidyltransferase class-I family K17103 - 2.7.8.8 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000606 314.0
DYD1_k127_3514400_2 alanine symporter K03310 - - 2.409e-208 655.0
DYD1_k127_3514400_20 Glutathione S-transferase K00799 - 2.5.1.18 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001859 315.0
DYD1_k127_3514400_21 Protein of unknown function (DUF3750) - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006395 303.0
DYD1_k127_3514400_22 PFAM Acyl-CoA dehydrogenase type 2 K16047 - 1.14.14.12 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000002497 306.0
DYD1_k127_3514400_23 N-acetylmuramoyl-L-alanine amidase K01447,K11066 - 3.5.1.28 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000004066 284.0
DYD1_k127_3514400_24 Methylates the class 1 translation termination release factors RF1 PrfA and RF2 PrfB on the glutamine residue of the universally conserved GGQ motif K02493 GO:0003674,GO:0003824,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006464,GO:0006479,GO:0006807,GO:0008150,GO:0008152,GO:0008168,GO:0008170,GO:0008213,GO:0008276,GO:0008757,GO:0009987,GO:0016740,GO:0016741,GO:0018364,GO:0019538,GO:0032259,GO:0036009,GO:0036211,GO:0043170,GO:0043412,GO:0043414,GO:0044237,GO:0044238,GO:0044260,GO:0044267,GO:0044424,GO:0044444,GO:0044464,GO:0071704,GO:0140096,GO:1901564 2.1.1.297 0.000000000000000000000000000000000000000000000000000000000000000000000000000000001452 280.0
DYD1_k127_3514400_25 Tripartite tricarboxylate transporter family receptor - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000002097 284.0
DYD1_k127_3514400_26 Taurine catabolism dioxygenase TauD, TfdA family - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000005441 279.0
DYD1_k127_3514400_27 COG1028 Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) K00019 - 1.1.1.30 0.0000000000000000000000000000000000000000000000000000000000000000000000000000003704 273.0
DYD1_k127_3514400_28 ATPases associated with a variety of cellular activities - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000001288 272.0
DYD1_k127_3514400_29 Dehydrogenase K03519 - 1.2.5.3 0.00000000000000000000000000000000000000000000000000000000000000000000000000005343 267.0
DYD1_k127_3514400_3 Belongs to the glutamate--cysteine ligase type 1 family. Type 1 subfamily K01919 - 6.3.2.2 2.017e-196 625.0
DYD1_k127_3514400_30 HlyD membrane-fusion protein of T1SS K03543 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000001306 273.0
DYD1_k127_3514400_31 Nitrile hydratase, alpha chain K01721,K20807 - 4.2.1.84 0.0000000000000000000000000000000000000000000000000000000000000000000000000001346 263.0
DYD1_k127_3514400_32 quinone binding K12057,K22278 - 3.5.1.104 0.000000000000000000000000000000000000000000000000000000000000000000000000003141 265.0
DYD1_k127_3514400_33 MatE K03327 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000004915 271.0
DYD1_k127_3514400_34 Zinc-binding dehydrogenase K00344 - 1.6.5.5 0.00000000000000000000000000000000000000000000000000000000000000000000000003219 261.0
DYD1_k127_3514400_35 helix_turn_helix isocitrate lyase regulation - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000002587 257.0
DYD1_k127_3514400_36 lactate metabolic process K00113 GO:0003674,GO:0005488,GO:0005575,GO:0005623,GO:0005886,GO:0006091,GO:0008150,GO:0008152,GO:0009061,GO:0009987,GO:0015980,GO:0016020,GO:0022900,GO:0043167,GO:0043169,GO:0044237,GO:0044464,GO:0045333,GO:0046872,GO:0048037,GO:0051536,GO:0051540,GO:0055114,GO:0071944 1.1.5.3 0.0000000000000000000000000000000000000000000000000000000000000000004741 240.0
DYD1_k127_3514400_37 2Fe-2S -binding domain protein K03518 - 1.2.5.3 0.000000000000000000000000000000000000000000000000000000000000000002623 232.0
DYD1_k127_3514400_38 ubiE/COQ5 methyltransferase family - - - 0.0000000000000000000000000000000000000000000000000000000000192 215.0
DYD1_k127_3514400_39 Protein conserved in bacteria - - - 0.000000000000000000000000000000000000000000000000000000001908 203.0
DYD1_k127_3514400_4 Catalyzes the NADPH-dependent reduction of glutamyl- tRNA(Glu) to glutamate 1-semialdehyde (GSA) K02492 - 1.2.1.70 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001328 559.0
DYD1_k127_3514400_40 Bacterial regulatory proteins, tetR family - - - 0.000000000000000000000000000000000000000000000000000000004011 205.0
DYD1_k127_3514400_41 Prolyl oligopeptidase family - - - 0.000000000000000000000000000000000000000000000000000002492 207.0
DYD1_k127_3514400_42 - - - - 0.00000000000000000000000000000000000000000000000000001872 198.0
DYD1_k127_3514400_43 3-hydroxyisobutyrate dehydrogenase K00020,K00042 - 1.1.1.31,1.1.1.60 0.000000000000000000000000000000000000000000002394 177.0
DYD1_k127_3514400_44 atp-binding protein - - - 0.000000000000000000000000000000000000000000002954 168.0
DYD1_k127_3514400_45 Belongs to the glutaredoxin family. Monothiol subfamily K07390 - - 0.000000000000000000000000000000000000000000009289 164.0
DYD1_k127_3514400_46 RDD family - - - 0.00000000000000000000000000000000000000000003892 167.0
DYD1_k127_3514400_47 Glutathione-dependent formaldehyde-activating - - - 0.00000000000000000000000000000000000000876 152.0
DYD1_k127_3514400_48 Nitrile hydratase beta subunit K20807 - 4.2.1.84 0.00000000000000000000000000000000000001356 151.0
DYD1_k127_3514400_49 membrane transporter protein K07090 - - 0.00000000000000000000000000000000000001959 154.0
DYD1_k127_3514400_5 Peptide chain release factor 1 directs the termination of translation in response to the peptide chain termination codons UAG and UAA K02835 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001749 548.0
DYD1_k127_3514400_50 protein conserved in bacteria K09790 - - 0.000000000000000000000000000000000002585 142.0
DYD1_k127_3514400_51 Alkaline phosphatase - - - 0.00000000000000000000000000000000003452 155.0
DYD1_k127_3514400_52 Endoribonuclease L-PSP - - - 0.0000000000000000000000000000000008868 134.0
DYD1_k127_3514400_53 TRAP transporter, solute receptor (TAXI family K07080 - - 0.0000000000000000000000000000000009578 143.0
DYD1_k127_3514400_54 Domain of unknown function (DUF1330) - - - 0.000000000000000000000000000000002558 132.0
DYD1_k127_3514400_55 Phosphate-starvation-inducible E K13256 - - 0.00000000000000000000000000000001979 133.0
DYD1_k127_3514400_57 - - - - 0.0000000000000000000000000000003612 127.0
DYD1_k127_3514400_58 lactoylglutathione lyase activity K01759 - 4.4.1.5 0.000000000000000000000000000009395 123.0
DYD1_k127_3514400_59 Nitrile hydratase beta subunit K20807 - 4.2.1.84 0.00000000000000000000000001606 113.0
DYD1_k127_3514400_6 CoA-transferase family III - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000584 527.0
DYD1_k127_3514400_60 protein conserved in bacteria - - - 0.0000000000000000000000002161 111.0
DYD1_k127_3514400_61 COG2199 FOG GGDEF domain - - - 0.00000000000000000001599 100.0
DYD1_k127_3514400_62 bacterial OsmY and nodulation domain - - - 0.0000000000000000232 87.0
DYD1_k127_3514400_63 DoxX K15977 - - 0.0000000000000003628 83.0
DYD1_k127_3514400_64 YCII-related domain K09780 GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0044424,GO:0044444,GO:0044464 - 0.000000000000003308 80.0
DYD1_k127_3514400_65 SMART Transport-associated and nodulation - - - 0.0000000006524 67.0
DYD1_k127_3514400_67 - - - - 0.000006772 52.0
DYD1_k127_3514400_7 Periplasmic binding protein domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007435 520.0
DYD1_k127_3514400_8 Oligopeptide/dipeptide transporter, C-terminal region K15583 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002922 476.0
DYD1_k127_3514400_9 Catalyzes the thermodynamically favored C-C bond cleavage of (2R,3S)-2-methylisocitrate to yield pyruvate and succinate K01841,K03417 - 4.1.3.30,5.4.2.9 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001726 450.0
DYD1_k127_3556795_0 Belongs to the DegT DnrJ EryC1 family K20429 - 2.6.1.33 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006577 536.0
DYD1_k127_3556795_1 Mandelate racemase / muconate lactonizing enzyme, C-terminal domain K20023 - 4.2.1.156,4.2.1.42 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005386 491.0
DYD1_k127_3556795_2 PFAM aldo keto reductase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009436 412.0
DYD1_k127_3556795_3 Attaches a formyl group to the free amino group of methionyl-tRNA(fMet). The formyl group appears to play a dual role in the initiator identity of N-formylmethionyl-tRNA by promoting its recognition by IF2 and preventing the misappropriation of this tRNA by the elongation apparatus K00604,K11175 GO:0003674,GO:0003824,GO:0004479,GO:0005488,GO:0005515,GO:0006139,GO:0006396,GO:0006399,GO:0006400,GO:0006412,GO:0006413,GO:0006464,GO:0006518,GO:0006725,GO:0006807,GO:0008033,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009405,GO:0009451,GO:0009987,GO:0010467,GO:0016070,GO:0016740,GO:0016741,GO:0016742,GO:0019538,GO:0019988,GO:0034470,GO:0034641,GO:0034645,GO:0034660,GO:0036211,GO:0042802,GO:0042803,GO:0043043,GO:0043170,GO:0043412,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044419,GO:0046483,GO:0046983,GO:0051704,GO:0071704,GO:0071951,GO:0090304,GO:0140098,GO:0140101,GO:1901360,GO:1901564,GO:1901566,GO:1901576 2.1.2.2,2.1.2.9 0.0000000000000000000000000000000000000000000000000000000000000000000000000000001172 271.0
DYD1_k127_3556795_4 SEC-C Motif Domain Protein - - - 0.000000000000000000000000000000000000000000000000000000000000000000000004804 246.0
DYD1_k127_3556795_5 3-demethylubiquinone-9 3-O-methyltransferase activity - - - 0.0000000000000000000000000000000000000000000000000000000000000000000002429 242.0
DYD1_k127_3556795_6 - - - - 0.0000000000000000000000000000000000000000000000000000000000000000000006438 257.0
DYD1_k127_3556795_7 Tetratricopeptide repeat - - - 0.00000000000000000000000000000000000000000000000000008529 209.0
DYD1_k127_3556795_8 membrane - - - 0.000000000000000000000000000000000000000000003433 166.0
DYD1_k127_3556795_9 Methyltransferase domain - - - 0.000000000000000000000000000000001911 142.0
DYD1_k127_3563814_0 ABC-type phosphate phosphonate transport system periplasmic component K02044 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003561 467.0
DYD1_k127_3563814_1 Part of the ABC transporter complex PhnCDE involved in phosphonates import. Responsible for energy coupling to the transport system K02041 - 3.6.3.28 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003722 375.0
DYD1_k127_3563814_2 COG3639 ABC-type phosphate phosphonate transport system, permease component K02042 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000735 351.0
DYD1_k127_3563814_3 COG3639 ABC-type phosphate phosphonate transport system, permease component K02042 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000007804 297.0
DYD1_k127_3563814_4 KTSC domain - - - 0.0000006864 51.0
DYD1_k127_3573026_0 Fumarate reductase flavoprotein C-term K00239,K00244 - 1.3.5.1,1.3.5.4 2.068e-272 849.0
DYD1_k127_3573026_1 PFAM D-galactarate dehydratase Altronate hydrolase domain protein K16846 - 4.4.1.24 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006449 513.0
DYD1_k127_3573026_10 PFAM (2R)-phospho-3-sulfolactate synthase ComA K08097 - 4.4.1.19 0.0000000000000000000000000000000003033 142.0
DYD1_k127_3573026_11 Succinate dehydrogenase/Fumarate reductase transmembrane subunit - - - 0.000000000000000000000000000003099 123.0
DYD1_k127_3573026_2 Fe-S type, tartrate fumarate subfamily, alpha subunit K03779 - 4.2.1.32 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001399 465.0
DYD1_k127_3573026_3 COG3119 Arylsulfatase A and related enzymes - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007445 394.0
DYD1_k127_3573026_4 Belongs to the LDH2 MDH2 oxidoreductase family K13609,K16844 - 1.1.1.338,1.5.1.21 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001049 373.0
DYD1_k127_3573026_5 TIGRFAM succinate dehydrogenase and fumarate reductase iron-sulfur protein - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000647 367.0
DYD1_k127_3573026_6 Fumarase C-terminus K01678,K03780 - 4.2.1.2,4.2.1.32 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000548 318.0
DYD1_k127_3573026_7 Acyl-CoA dehydrogenase, N-terminal domain K00248,K00249 - 1.3.8.1,1.3.8.7 0.0000000000000000000000000000000000000000000005194 181.0
DYD1_k127_3573026_8 PFAM acyl-CoA dehydrogenase domain protein - - - 0.00000000000000000000000000000000000000002128 169.0
DYD1_k127_3573026_9 Succinate dehydrogenase/Fumarate reductase transmembrane subunit - - - 0.0000000000000000000000000000000000000001669 156.0
DYD1_k127_3617332_0 transglycosylase K08309 - - 4.384e-201 645.0
DYD1_k127_3617332_1 Catalyzes the anaerobic formation of alpha-ketobutyrate and ammonia from threonine in a two-step reaction. The first step involved a dehydration of threonine and a production of enamine intermediates (aminocrotonate), which tautomerizes to its imine form (iminobutyrate). Both intermediates are unstable and short- lived. The second step is the nonenzymatic hydrolysis of the enamine imine intermediates to form 2-ketobutyrate and free ammonia. In the low water environment of the cell, the second step is accelerated by RidA K01754 GO:0006082,GO:0006520,GO:0006566,GO:0006807,GO:0008150,GO:0008152,GO:0009066,GO:0009987,GO:0019752,GO:0043436,GO:0044237,GO:0044238,GO:0044281,GO:0071704,GO:1901564,GO:1901605 4.3.1.19 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007864 547.0
DYD1_k127_3617332_2 Catalyzes the addition and repair of the essential 3'- terminal CCA sequence in tRNAs without using a nucleic acid template. Adds these three nucleotides in the order of C, C, and A to the tRNA nucleotide-73, using CTP and ATP as substrates and producing inorganic pyrophosphate. Also shows phosphatase, 2'- nucleotidase and 2',3'-cyclic phosphodiesterase activities. These phosphohydrolase activities are probably involved in the repair of the tRNA 3'-CCA terminus degraded by intracellular RNases K00974 - 2.7.7.72 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003727 387.0
DYD1_k127_3617332_3 Belongs to the GST superfamily K11209 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003599 324.0
DYD1_k127_3617332_4 NmrA-like family K00329,K00356 - 1.6.5.3,1.6.99.3 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002712 316.0
DYD1_k127_3617332_5 Glycosyl hydrolase 36 superfamily, catalytic domain K13688,K18786 - 2.4.1.321 0.00000000000000000000000000000000000000000000000000000000000000000000000000000003051 270.0
DYD1_k127_3617332_6 - - - - 0.0000000000002431 74.0
DYD1_k127_3735120_0 RESPONSE REGULATOR receiver - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002448 598.0
DYD1_k127_3735120_1 SMART Tetratricopeptide domain protein - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001302 580.0
DYD1_k127_3735120_10 transcriptional regulatory protein - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006198 381.0
DYD1_k127_3735120_11 Bacterial protein of unknown function (DUF899) - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006768 371.0
DYD1_k127_3735120_12 PFAM ABC transporter K01990 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002324 370.0
DYD1_k127_3735120_13 Glutamine cyclotransferase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002988 366.0
DYD1_k127_3735120_14 Catalyzes the phosphorylation of the position 2 hydroxy group of 4-diphosphocytidyl-2C-methyl-D-erythritol K00919 - 2.7.1.148 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002663 344.0
DYD1_k127_3735120_15 Involved in base excision repair of DNA damaged by oxidation or by mutagenic agents. Acts as DNA glycosylase that recognizes and removes damaged bases. Has a preference for oxidized purines, such as 7,8-dihydro-8-oxoguanine (8-oxoG). Has AP (apurinic apyrimidinic) lyase activity and introduces nicks in the DNA strand. Cleaves the DNA backbone by beta-delta elimination to generate a single-strand break at the site of the removed base with both 3'- and 5'-phosphates K10563 - 3.2.2.23,4.2.99.18 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009376 337.0
DYD1_k127_3735120_16 Converts heme B (protoheme IX) to heme O by substitution of the vinyl group on carbon 2 of heme B porphyrin ring with a hydroxyethyl farnesyl side group K02257 - 2.5.1.141 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000916 322.0
DYD1_k127_3735120_17 EamA-like transporter family - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004448 314.0
DYD1_k127_3735120_18 Part of the ABC transporter FtsEX involved in cellular division K09811 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000002815 301.0
DYD1_k127_3735120_19 cell division K09812 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000007218 298.0
DYD1_k127_3735120_2 ATPase that binds to both the 70S ribosome and the 50S ribosomal subunit in a nucleotide-independent manner K06942 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003585 529.0
DYD1_k127_3735120_20 Nuclease that resolves Holliday junction intermediates in genetic recombination. Cleaves the cruciform structure in supercoiled DNA by nicking to strands with the same polarity at sites symmetrically opposed at the junction in the homologous arms and leaves a 5'-terminal phosphate and a 3'-terminal hydroxyl group K01159 - 3.1.22.4 0.00000000000000000000000000000000000000000000000000000000000000000000000001567 259.0
DYD1_k127_3735120_21 Belongs to the pseudouridine synthase RsuA family K06181 - 5.4.99.20 0.00000000000000000000000000000000000000000000000000000000000000000000003604 246.0
DYD1_k127_3735120_22 Reversibly transfers an adenylyl group from ATP to 4'- phosphopantetheine, yielding dephospho-CoA (dPCoA) and pyrophosphate K00954 - 2.7.7.3 0.0000000000000000000000000000000000000000000000000000000000000000000002649 244.0
DYD1_k127_3735120_23 Involved in biogenesis of respiratory and photosynthetic systems K07152 - - 0.000000000000000000000000000000000000000000000000000000000000000000007694 239.0
DYD1_k127_3735120_24 This is one of the proteins that binds to the 5S RNA in the ribosome where it forms part of the central protuberance K02897 - - 0.00000000000000000000000000000000000000000000000000000000000000006798 230.0
DYD1_k127_3735120_25 ABC-2 family transporter protein K01992 - - 0.0000000000000000000000000000000000000000000000000000000000000001799 229.0
DYD1_k127_3735120_26 Peptidyl-tRNA hydrolase K01056 - 3.1.1.29 0.0000000000000000000000000000000000000000000000000000000000000004144 233.0
DYD1_k127_3735120_27 Conserved hypothetical protein 95 K08316 - 2.1.1.171 0.00000000000000000000000000000000000000000000000000000000008779 209.0
DYD1_k127_3735120_28 Domain of unknown function (DUF4340) - - - 0.00000000000000000000000000000000000000000000001783 183.0
DYD1_k127_3735120_29 Major facilitator superfamily MFS_1 - - - 0.00000000000000000000000000000000000000000007033 175.0
DYD1_k127_3735120_3 PFAM Peptidase M16 K07263 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001013 531.0
DYD1_k127_3735120_30 Ferredoxin - - - 0.0000000000000000000000000000000000000000001357 160.0
DYD1_k127_3735120_31 DGC domain - - - 0.000000000000000000000000000000000000000009485 160.0
DYD1_k127_3735120_32 The RuvA-RuvB complex in the presence of ATP renatures cruciform structure in supercoiled DNA with palindromic sequence, indicating that it may promote strand exchange reactions in homologous recombination. RuvAB is a helicase that mediates the Holliday junction migration by localized denaturation and reannealing. RuvA stimulates, in the presence of DNA, the weak ATPase activity of RuvB K03550 - 3.6.4.12 0.0000000000000000000000000000000000000006312 149.0
DYD1_k127_3735120_33 Plays a critical role in the incorporation of lipoproteins in the outer membrane after they are released by the LolA protein K02494 - - 0.00000000000000000000000000000008759 133.0
DYD1_k127_3735120_34 Pfam Ankyrin K06867 - - 0.0000000002475 72.0
DYD1_k127_3735120_4 Amidohydrolase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001544 508.0
DYD1_k127_3735120_5 Involved in the biosynthesis of the central metabolite phospho-alpha-D-ribosyl-1-pyrophosphate (PRPP) via the transfer of pyrophosphoryl group from ATP to 1-hydroxyl of ribose-5-phosphate (Rib-5-P) K00948 - 2.7.6.1 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001285 499.0
DYD1_k127_3735120_6 Peptidase M16 K07263 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002023 506.0
DYD1_k127_3735120_7 transport system - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008372 466.0
DYD1_k127_3735120_8 Involved in targeting and insertion of nascent membrane proteins into the cytoplasmic membrane. Acts as a receptor for the complex formed by the signal recognition particle (SRP) and the ribosome-nascent chain (RNC). Interaction with SRP-RNC leads to the transfer of the RNC complex to the Sec translocase for insertion into the membrane, the hydrolysis of GTP by both Ffh and FtsY, and the dissociation of the SRP-FtsY complex into the individual components K03110 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002431 411.0
DYD1_k127_3735120_9 Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released. This sigma factor is involved in regulation of expression of heat shock genes K03089 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006576 394.0
DYD1_k127_38065_0 belongs to the aldehyde dehydrogenase family K00128,K00130 - 1.2.1.3,1.2.1.8 4.986e-245 772.0
DYD1_k127_38065_1 PFAM monooxygenase FAD-binding K05712 - 1.14.13.127 6.08e-229 721.0
DYD1_k127_38065_10 Rhomboid family - - - 0.00000000000000000001407 92.0
DYD1_k127_38065_11 Glyoxalase-like domain K08234 - - 0.000000005047 67.0
DYD1_k127_38065_2 Tripartite tricarboxylate transporter TctA family - - - 1.057e-208 670.0
DYD1_k127_38065_3 Amidohydrolase family K01485 - 3.5.4.1 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006449 447.0
DYD1_k127_38065_4 Pyridoxamine 5'-phosphate oxidase K07006 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000662 281.0
DYD1_k127_38065_5 SMP-30/Gluconolaconase/LRE-like region K01053 - 3.1.1.17 0.000000000000000000000000000000000000000000000000000000000000000000000000004949 262.0
DYD1_k127_38065_6 Tripartite tricarboxylate transporter family receptor - - - 0.000000000000000000000000000000000000000000000000000000000001505 222.0
DYD1_k127_38065_7 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily - - - 0.0000000000000000000000000000000000000000000000000000001729 198.0
DYD1_k127_38065_8 Multidrug transporter K08161 - - 0.0000000000000000000000000000000000000000000000002074 192.0
DYD1_k127_38065_9 Activator of Hsp90 ATPase homolog 1-like protein - - - 0.000000000000000000000000000000000000000004485 158.0
DYD1_k127_3818707_0 May play a key role in the regulation of the intracellular concentration of adenosylhomocysteine K01251 - 3.3.1.1 1.329e-249 775.0
DYD1_k127_3818707_1 Catalyzes cross-linking of the peptidoglycan cell wall K05515 - 3.4.16.4 4.213e-249 784.0
DYD1_k127_3818707_10 Lytic transglycosylase with a strong preference for naked glycan strands that lack stem peptides K03642 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000114 311.0
DYD1_k127_3818707_11 lipid A biosynthesis lauroyl acyltransferase K02517 - 2.3.1.241 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000004033 293.0
DYD1_k127_3818707_12 Involved in formation and maintenance of cell shape K03570 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000004567 287.0
DYD1_k127_3818707_13 Methyltransferase domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000005702 254.0
DYD1_k127_3818707_14 ZIP Zinc transporter K16267 - - 0.000000000000000000000000000000000000000000000000000000000000000000000003452 252.0
DYD1_k127_3818707_15 protein conserved in bacteria K09921 - - 0.00000000000000000000000000000000000000000000000000000000000000000000007004 252.0
DYD1_k127_3818707_16 rod shape-determining protein MreD K03571 - - 0.0000000000000000000000000000000000000000000005939 171.0
DYD1_k127_3818707_17 CoA-binding protein K06929 - - 0.000000000000000000000000000000000000575 143.0
DYD1_k127_3818707_18 Ferric uptake regulator family K03711 - - 0.00000000000000000000000000000000001029 142.0
DYD1_k127_3818707_19 Interacts with outer membrane receptor proteins that carry out high-affinity binding and energy dependent uptake into the periplasmic space of specific substrates. It could act to transduce energy from the cytoplasmic membrane to specific energy- requiring processes in the outer membrane, resulting in the release into the periplasm of ligands bound by these outer membrane proteins K03832 - - 0.00000000000000000000000000000000389 137.0
DYD1_k127_3818707_2 Catalyzes the formation of S-adenosylmethionine (AdoMet) from methionine and ATP. The overall synthetic reaction is composed of two sequential steps, AdoMet formation and the subsequent tripolyphosphate hydrolysis which occurs prior to release of AdoMet from the enzyme K00789 - 2.5.1.6 1.708e-194 616.0
DYD1_k127_3818707_20 Could be involved in insertion of integral membrane proteins into the membrane K08998 - - 0.00000000000000000000000004045 108.0
DYD1_k127_3818707_21 PFAM Methylenetetrahydrofolate reductase K00297 - 1.5.1.20 0.00000000000001017 76.0
DYD1_k127_3818707_3 TIGRFAM cell shape determining protein, MreB Mrl family K03569 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001522 595.0
DYD1_k127_3818707_4 Peptidoglycan polymerase that is essential for cell wall elongation K05837 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002943 497.0
DYD1_k127_3818707_5 SMART PUA domain containing protein K06969 - 2.1.1.191 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000337 459.0
DYD1_k127_3818707_6 Catalyzes the stereoinversion of LL-2,6- diaminoheptanedioate (L,L-DAP) to meso-diaminoheptanedioate (meso- DAP), a precursor of L-lysine and an essential component of the bacterial peptidoglycan K01778 GO:0003674,GO:0003824,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006082,GO:0006520,GO:0006553,GO:0006807,GO:0008150,GO:0008152,GO:0008652,GO:0008837,GO:0009058,GO:0009066,GO:0009067,GO:0009085,GO:0009089,GO:0009987,GO:0016053,GO:0016853,GO:0016854,GO:0016855,GO:0019752,GO:0036361,GO:0043436,GO:0043648,GO:0044237,GO:0044238,GO:0044249,GO:0044281,GO:0044283,GO:0044424,GO:0044444,GO:0044464,GO:0046394,GO:0046451,GO:0047661,GO:0071704,GO:1901564,GO:1901566,GO:1901576,GO:1901605,GO:1901607 5.1.1.7 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001507 392.0
DYD1_k127_3818707_7 Lipid A Biosynthesis K02517,K12974 - 2.3.1.241,2.3.1.242 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008048 382.0
DYD1_k127_3818707_8 Phage integrase, N-terminal SAM-like domain K03733 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000198 364.0
DYD1_k127_3818707_9 Oxidoreductase family, NAD-binding Rossmann fold K09949 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002172 310.0
DYD1_k127_3829142_0 thus facilitating recognition of the initiation point. It is needed to translate mRNA with a short Shine-Dalgarno (SD) purine-rich sequence K02945 - - 4.207e-205 642.0
DYD1_k127_3829142_1 Protein conserved in bacteria - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000514 550.0
DYD1_k127_3829142_10 protein conserved in bacteria K09978 - - 0.0000000000000000000000000000000000000000000000005803 181.0
DYD1_k127_3829142_11 This protein is one of the two subunits of integration host factor, a specific DNA-binding protein that functions in genetic recombination as well as in transcriptional and translational control K05788 - - 0.0000000000000000000000000000000000000000000001035 169.0
DYD1_k127_3829142_12 Lipopolysaccharide assembly protein A domain K08992 - - 0.000000000000000000006283 96.0
DYD1_k127_3829142_13 - - - - 0.0000000000005421 76.0
DYD1_k127_3829142_2 Modulates cellular lipopolysaccharide (LPS) levels by regulating LpxC, which is involved in lipid A biosynthesis. May act by modulating the proteolytic activity of FtsH towards LpxC. May also coordinate assembly of proteins involved in LPS synthesis at the plasma membrane K19804 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000118 525.0
DYD1_k127_3829142_3 Belongs to the cysteine synthase cystathionine beta- synthase family K12339 GO:0000003,GO:0000096,GO:0000097,GO:0000902,GO:0000904,GO:0003006,GO:0003674,GO:0003824,GO:0004124,GO:0005488,GO:0005575,GO:0005576,GO:0005622,GO:0005623,GO:0005634,GO:0005737,GO:0005773,GO:0005774,GO:0005777,GO:0005829,GO:0005886,GO:0006082,GO:0006520,GO:0006534,GO:0006535,GO:0006563,GO:0006790,GO:0006807,GO:0007568,GO:0008144,GO:0008150,GO:0008152,GO:0008652,GO:0009058,GO:0009069,GO:0009070,GO:0009507,GO:0009532,GO:0009536,GO:0009566,GO:0009567,GO:0009570,GO:0009653,GO:0009826,GO:0009856,GO:0009860,GO:0009932,GO:0009987,GO:0010035,GO:0010038,GO:0016020,GO:0016043,GO:0016049,GO:0016053,GO:0016740,GO:0016765,GO:0019344,GO:0019752,GO:0019842,GO:0019953,GO:0022414,GO:0030154,GO:0030170,GO:0031090,GO:0032501,GO:0032502,GO:0032989,GO:0036094,GO:0040007,GO:0042221,GO:0042579,GO:0043167,GO:0043168,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0043436,GO:0044237,GO:0044238,GO:0044249,GO:0044272,GO:0044281,GO:0044283,GO:0044422,GO:0044424,GO:0044434,GO:0044435,GO:0044437,GO:0044444,GO:0044446,GO:0044464,GO:0044703,GO:0044706,GO:0046394,GO:0046686,GO:0048037,GO:0048046,GO:0048468,GO:0048588,GO:0048589,GO:0048856,GO:0048868,GO:0048869,GO:0050662,GO:0050896,GO:0051704,GO:0060560,GO:0070279,GO:0071704,GO:0071840,GO:0071944,GO:0097159,GO:0098588,GO:0098805,GO:1901363,GO:1901564,GO:1901566,GO:1901576,GO:1901605,GO:1901607 2.5.1.47 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006638 490.0
DYD1_k127_3829142_4 3-beta hydroxysteroid dehydrogenase/isomerase family K03274 - 5.1.3.20 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002982 452.0
DYD1_k127_3829142_5 Predicted 3'-5' exonuclease related to the exonuclease domain of PolB K07501 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005901 415.0
DYD1_k127_3829142_6 Bifunctional protein K03272,K21344 - 2.7.1.167,2.7.7.70 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002165 387.0
DYD1_k127_3829142_7 Catalyzes the decarboxylation of orotidine 5'- monophosphate (OMP) to uridine 5'-monophosphate (UMP) K01591 - 4.1.1.23 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000006212 299.0
DYD1_k127_3829142_8 methyltransferase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000006188 280.0
DYD1_k127_3829142_9 Catalyzes the formation of 5-methyl-uridine at position 1939 (m5U1939) in 23S rRNA K03215 - 2.1.1.190 0.00000000000000000000000000000000000000000000000000000000000000000000000000002305 262.0
DYD1_k127_3830176_0 type II secretion system protein E K02454,K02652,K12276 - - 1.091e-237 749.0
DYD1_k127_3830176_1 Type II secretion system (T2SS), protein F K02455,K12278 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001996 453.0
DYD1_k127_3830176_2 Glycerol-3-phosphate dehydrogenase K00057 - 1.1.1.94 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000057 367.0
DYD1_k127_3830176_3 One of the proteins required for the normal export of preproteins out of the cell cytoplasm. It is a molecular chaperone that binds to a subset of precursor proteins, maintaining them in a translocation-competent state. It also specifically binds to its receptor SecA K03071 - - 0.000000000000000000000000000000000000000000000001172 178.0
DYD1_k127_3830176_4 Bacterial SH3 domain - - - 0.0000000000000000000000000000000000000000859 162.0
DYD1_k127_3830176_5 Rhodanese Homology Domain - - - 0.000000000000000000000000000000008063 132.0
DYD1_k127_3830176_6 Has a glutathione-disulfide oxidoreductase activity in the presence of NADPH and glutathione reductase. Reduces low molecular weight disulfides and proteins K03676 - - 0.0000000000000000000000000005793 117.0
DYD1_k127_3833038_0 MmgE/PrpD family - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004153 576.0
DYD1_k127_3833038_1 oxidoreductase activity K07114 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002097 563.0
DYD1_k127_3833038_10 Binding-protein-dependent transport system inner membrane component K02034 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006978 316.0
DYD1_k127_3833038_11 PFAM Patatin K07001 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001934 317.0
DYD1_k127_3833038_12 oxidoreductase activity - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000005215 315.0
DYD1_k127_3833038_13 Tripartite tricarboxylate transporter family receptor - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000004709 258.0
DYD1_k127_3833038_14 Protein of unknown function (DUF3300) - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000006452 261.0
DYD1_k127_3833038_15 Oxidoreductase family, NAD-binding Rossmann fold - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000008018 259.0
DYD1_k127_3833038_16 Von Willebrand factor type A - - - 0.00000000000000000000000000000000000000000000000000000000000000007257 233.0
DYD1_k127_3833038_17 decarboxylase K01607 - 4.1.1.44 0.0000000000000000000000000000000000000000000000000001362 196.0
DYD1_k127_3833038_18 Domain of unknown function (DUF1993) K09983 - - 0.0000000000000000000000000000000000000000000000000001677 190.0
DYD1_k127_3833038_19 Diguanylate cyclase with PAS PAC and GAF sensors - - - 0.00000000000000000000000000000000000000000000000002167 198.0
DYD1_k127_3833038_2 COG2951 Membrane-bound lytic murein transglycosylase B - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005533 481.0
DYD1_k127_3833038_20 Thiamine pyrophosphate enzyme, central domain - - - 0.000000000000000000000000000000000000000007688 156.0
DYD1_k127_3833038_21 Copper chaperone PCu(A)C K09796 - - 0.00000000000000000000000000000000000000004613 156.0
DYD1_k127_3833038_22 MAPEG family - - - 0.0000000000000000000000000000000000000004077 152.0
DYD1_k127_3833038_23 Carbon monoxide dehydrogenase subunit G (CoxG) - - - 0.00000000000000000000000000000000000004746 150.0
DYD1_k127_3833038_24 Family 5 K02035 - - 0.0000000000000000000000000000000000001009 160.0
DYD1_k127_3833038_25 regulation of ryanodine-sensitive calcium-release channel activity - - - 0.0000000000000000000000002009 118.0
DYD1_k127_3833038_26 NfeD-like C-terminal, partner-binding - - - 0.0000000000000000001721 102.0
DYD1_k127_3833038_27 PFAM AMP-dependent synthetase and ligase - - - 0.00000000000000002022 97.0
DYD1_k127_3833038_28 Catalyzes the hydrolysis of N-formyl-L-kynurenine to L- kynurenine, the second step in the kynurenine pathway of tryptophan degradation - - - 0.000000000000006377 87.0
DYD1_k127_3833038_29 - - - - 0.000002079 55.0
DYD1_k127_3833038_3 COG0534 Na -driven multidrug efflux pump K03327 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007439 430.0
DYD1_k127_3833038_4 Putative cyclase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009291 390.0
DYD1_k127_3833038_5 Belongs to the ABC transporter superfamily K02032 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005016 383.0
DYD1_k127_3833038_6 ATPase family associated with various cellular activities (AAA) K03924 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009165 372.0
DYD1_k127_3833038_7 Belongs to the ABC transporter superfamily K02031 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000335 353.0
DYD1_k127_3833038_8 Fumarylacetoacetate (FAA) hydrolase family - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007218 326.0
DYD1_k127_3833038_9 Putative esterase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001064 323.0
DYD1_k127_3839810_0 In eubacteria ppGpp (guanosine 3'-diphosphate 5-' diphosphate) is a mediator of the stringent response that coordinates a variety of cellular activities in response to changes in nutritional abundance K01139 - 2.7.6.5,3.1.7.2 0.0 1035.0
DYD1_k127_3839810_1 hydrolases or acyltransferases, alpha beta hydrolase superfamily - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005891 591.0
DYD1_k127_3839810_10 Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain K03520 - 1.2.5.3 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002171 381.0
DYD1_k127_3839810_11 PFAM Peptidase family M28 - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003734 362.0
DYD1_k127_3839810_12 Phosphorolytic exoribonuclease that removes nucleotide residues following the -CCA terminus of tRNA and adds nucleotides to the ends of RNA molecules by using nucleoside diphosphates as substrates K00989 - 2.7.7.56 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001076 347.0
DYD1_k127_3839810_13 Catalyzes the formation of N(7)-methylguanine at position 46 (m7G46) in tRNA K03439 - 2.1.1.33 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001647 338.0
DYD1_k127_3839810_14 Domain of unknown function (DUF1732) - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001215 330.0
DYD1_k127_3839810_15 Aerobic-type carbon monoxide dehydrogenase, middle subunit CoxM K03519 - 1.2.5.3 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004408 312.0
DYD1_k127_3839810_16 TIGRFAM 3-hydroxybutyrate dehydrogenase K00019 - 1.1.1.30 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000002077 278.0
DYD1_k127_3839810_17 Tripartite tricarboxylate transporter family receptor - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000001725 282.0
DYD1_k127_3839810_18 Essential for recycling GMP and indirectly, cGMP K00942 - 2.7.4.8 0.000000000000000000000000000000000000000000000000000000000000000000000000278 252.0
DYD1_k127_3839810_19 Pyrophosphatase that catalyzes the hydrolysis of nucleoside triphosphates to their monophosphate derivatives, with a high preference for the non-canonical purine nucleotides XTP (xanthosine triphosphate), dITP (deoxyinosine triphosphate) and ITP. Seems to function as a house-cleaning enzyme that removes non-canonical purine nucleotides from the nucleotide pool, thus preventing their incorporation into DNA RNA and avoiding chromosomal lesions K02428 - 3.6.1.66 0.000000000000000000000000000000000000000000000000000000000000000000000002599 263.0
DYD1_k127_3839810_2 Sigma-54 interaction domain K07715 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002403 589.0
DYD1_k127_3839810_20 [2Fe-2S] binding domain K03518 - 1.2.5.3 0.0000000000000000000000000000000000000000000000000000000000000000004699 232.0
DYD1_k127_3839810_21 Enoyl-CoA hydratase/isomerase K01661,K07536 - 4.1.3.36 0.00000000000000000000000000000000000000000000000000000000000000006075 233.0
DYD1_k127_3839810_22 Function proposed based on presence of conserved amino acid motif, structural feature or limited homology - - - 0.00000000000000000000000000000000000000000000000000000274 208.0
DYD1_k127_3839810_23 toluene tolerance family protein K07323 - - 0.0000000000000000000000000000000000000000009792 164.0
DYD1_k127_3839810_24 COG0346 Lactoylglutathione lyase and related lyases K05606 - 5.1.99.1 0.0000000000000000000000000000000000001492 145.0
DYD1_k127_3839810_25 PFAM 17 kDa surface antigen - - - 0.000000000000000000000000000000000235 142.0
DYD1_k127_3839810_26 Protein PsiE homolog K13256 GO:0005575,GO:0005623,GO:0005886,GO:0016020,GO:0044464,GO:0071944 - 0.000000000000000000000000000000001451 136.0
DYD1_k127_3839810_27 Promotes RNA polymerase assembly. Latches the N- and C- terminal regions of the beta' subunit thereby facilitating its interaction with the beta and alpha subunits K03060 - 2.7.7.6 0.0000000000000000000000001516 108.0
DYD1_k127_3839810_28 ThiS family K03154 - - 0.0000000000000000003724 94.0
DYD1_k127_3839810_29 ABC-type dipeptide oligopeptide nickel transport systems, permease components K02034 GO:0005575,GO:0005623,GO:0005886,GO:0005887,GO:0016020,GO:0016021,GO:0031224,GO:0031226,GO:0044425,GO:0044459,GO:0044464,GO:0071944 - 0.00000000000000005168 80.0
DYD1_k127_3839810_3 Pyridoxal-phosphate dependent enzyme K01738 GO:0000096,GO:0000097,GO:0003674,GO:0003824,GO:0004124,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006082,GO:0006520,GO:0006534,GO:0006535,GO:0006563,GO:0006790,GO:0006807,GO:0008144,GO:0008150,GO:0008152,GO:0008652,GO:0009058,GO:0009069,GO:0009070,GO:0009987,GO:0016053,GO:0016740,GO:0016765,GO:0019344,GO:0019752,GO:0019842,GO:0030170,GO:0036094,GO:0043167,GO:0043168,GO:0043436,GO:0044237,GO:0044238,GO:0044249,GO:0044272,GO:0044281,GO:0044283,GO:0044424,GO:0044464,GO:0046394,GO:0048037,GO:0050662,GO:0070279,GO:0071704,GO:0097159,GO:1901363,GO:1901564,GO:1901566,GO:1901576,GO:1901605,GO:1901607 2.5.1.47 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001631 532.0
DYD1_k127_3839810_31 - - - - 0.000000000007201 69.0
DYD1_k127_3839810_32 - - - - 0.00000008695 57.0
DYD1_k127_3839810_4 Involved in the biosynthesis of porphyrin-containing compound - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000138 524.0
DYD1_k127_3839810_5 Catalyzes the formation of acetyl phosphate from acetate and ATP. Can also catalyze the reverse reaction K00925 - 2.7.2.1 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002048 518.0
DYD1_k127_3839810_6 Catalyzes the rearrangement of 1-deoxy-D-xylulose 5- phosphate (DXP) to produce the thiazole phosphate moiety of thiamine. Sulfur is provided by the thiocarboxylate moiety of the carrier protein ThiS. In vitro, sulfur can be provided by H(2)S K03149 - 2.8.1.10 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000661 439.0
DYD1_k127_3839810_7 Malate/L-lactate dehydrogenase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001201 444.0
DYD1_k127_3839810_8 CoA-transferase family III - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001027 437.0
DYD1_k127_3839810_9 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain K07711 - 2.7.13.3 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007202 427.0
DYD1_k127_3852494_0 GMC oxidoreductase K00108 - 1.1.99.1 6.324e-238 746.0
DYD1_k127_3852494_1 Thiamine pyrophosphate enzyme, central domain K01652 - 2.2.1.6 5.04e-223 704.0
DYD1_k127_3852494_10 Cupin domain - - - 0.00000000000000000000000001681 115.0
DYD1_k127_3852494_11 Protein-L-isoaspartate(D-aspartate) O-methyltransferase (PCMT) - - - 0.0000000000000000000000007683 115.0
DYD1_k127_3852494_12 Prokaryotic dksA/traR C4-type zinc finger - - - 0.0000000000000003322 85.0
DYD1_k127_3852494_14 Antibiotic biosynthesis monooxygenase - - - 0.000000000003551 70.0
DYD1_k127_3852494_2 Mandelate racemase / muconate lactonizing enzyme, C-terminal domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001262 541.0
DYD1_k127_3852494_3 Dienelactone hydrolase family K01061 - 3.1.1.45 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001426 473.0
DYD1_k127_3852494_4 Belongs to the peptidase S1B family - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007596 468.0
DYD1_k127_3852494_5 gluconolactonase K01053,K14274 - 3.1.1.17 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002313 359.0
DYD1_k127_3852494_6 Methyltransferase domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000004526 249.0
DYD1_k127_3852494_7 ATPase activity K10112,K10195 - - 0.000000000000000000000000000000000000000000000002214 180.0
DYD1_k127_3852494_8 flavin reductase - - - 0.0000000000000000000000000000000000000001549 158.0
DYD1_k127_3852494_9 Universal stress protein family - - - 0.0000000000000000000000000000000005881 137.0
DYD1_k127_3861852_0 General (non sugar-specific) component of the phosphoenolpyruvate-dependent sugar phosphotransferase system (sugar PTS). This major carbohydrate active-transport system catalyzes the phosphorylation of incoming sugar substrates concomitantly with their translocation across the cell membrane. Enzyme I transfers the phosphoryl group from phosphoenolpyruvate (PEP) to the phosphoryl carrier protein (HPr) K08483 - 2.7.3.9 6.296e-231 728.0
DYD1_k127_3861852_1 Magnesium chelatase, subunit ChlI C-terminal K07391 - - 2.099e-220 693.0
DYD1_k127_3861852_10 Psort location Cytoplasmic, score 8.96 K09806 - - 0.00000000000000000003218 94.0
DYD1_k127_3861852_2 Ammonium Transporter K03320 - - 2.073e-198 630.0
DYD1_k127_3861852_3 Belongs to the prokaryotic GSH synthase family K01920 - 6.3.2.3 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001553 440.0
DYD1_k127_3861852_4 drug resistance transporter K07552 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003372 382.0
DYD1_k127_3861852_5 Bacterial protein of unknown function (Gcw_chp) - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000006853 288.0
DYD1_k127_3861852_6 VIT family - - - 0.00000000000000000000000000000000000000000000000000000000000000000000007563 249.0
DYD1_k127_3861852_7 Belongs to the P(II) protein family K04752 - - 0.000000000000000000000000000000000000000000000000000000002778 201.0
DYD1_k127_3861852_8 Phosphotransferase system, mannose fructose-specific component IIA K02821 - 2.7.1.194 0.00000000000000000000000000000000000000000000000004366 181.0
DYD1_k127_3861852_9 Phosphotransferase System K11189 - - 0.0000000000000000000000000000009096 123.0
DYD1_k127_3862483_0 abc transporter K06020 - 3.6.3.25 6.966e-290 897.0
DYD1_k127_3862483_1 Synthesizes alpha-1,4-glucan chains using ADP-glucose K00703 - 2.4.1.21 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007958 490.0
DYD1_k127_3862483_2 ROK family K00886 - 2.7.1.63 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001098 333.0
DYD1_k127_3862483_3 AcrB/AcrD/AcrF family - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000002991 254.0
DYD1_k127_3862483_4 - - - - 0.000000000000000000000000000000000000000000000000000000000000000000000003749 257.0
DYD1_k127_3862483_5 cell redox homeostasis - - - 0.000000000000000000000000000000000000000000000000000000000000000000000278 250.0
DYD1_k127_3873215_0 Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain - - - 0.0 1049.0
DYD1_k127_3873215_1 GTP-binding protein K06207 - - 6.312e-302 937.0
DYD1_k127_3873215_10 ABC transporter permease K02029,K10003 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004017 334.0
DYD1_k127_3873215_11 Alpha beta hydrolase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001173 335.0
DYD1_k127_3873215_12 PFAM NAD binding domain of 6-phosphogluconate dehydrogenase K00020 - 1.1.1.31 0.0000000000000000000000000000000000000000000000000000000000000000000000000000004212 276.0
DYD1_k127_3873215_13 [2Fe-2S] binding domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000002355 244.0
DYD1_k127_3873215_14 Tripartite tricarboxylate transporter family receptor - - - 0.00000000000000000000000000000000000000000000000000000000000000000000287 247.0
DYD1_k127_3873215_15 Mannose-6-phosphate isomerase - - - 0.00000000000000000000000000000000000000000004971 165.0
DYD1_k127_3873215_16 - - - - 0.0000000000000000000000000000000000002878 149.0
DYD1_k127_3873215_17 Pfam:Pyridox_oxidase - - - 0.000000000000000000000000000000004574 133.0
DYD1_k127_3873215_18 CO dehydrogenase flavoprotein C-terminal domain K03519 - 1.2.5.3 0.0000000000000000003319 89.0
DYD1_k127_3873215_2 3-octaprenyl-4-hydroxybenzoate carboxy-lyase - - - 3.702e-258 804.0
DYD1_k127_3873215_3 Belongs to the peptidase M20A family. ArgE subfamily K01438 - 3.5.1.16 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005325 470.0
DYD1_k127_3873215_4 Pyridoxal-phosphate dependent enzyme K01738 - 2.5.1.47 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004896 437.0
DYD1_k127_3873215_5 ABC-type polar amino acid transport system, ATPase component K10004 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004966 399.0
DYD1_k127_3873215_6 Bacterial extracellular solute-binding proteins, family 3 K02030,K10001 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002901 399.0
DYD1_k127_3873215_7 COG2141 Coenzyme F420-dependent N5,N10-methylene tetrahydromethanopterin reductase and related flavin-dependent oxidoreductases - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005734 363.0
DYD1_k127_3873215_8 chromosome segregation K03497 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002043 367.0
DYD1_k127_3873215_9 With GltJLPS and GadC for glutamate and GltJLP, DctA and DcuAB for aspartate is involved in the transport of glutamate and aspartate K10002 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006814 339.0
DYD1_k127_3970147_0 Sulfatase K01130 - 3.1.6.1 0.0 1093.0
DYD1_k127_3970147_1 Topoisomerase IV is essential for chromosome segregation. It relaxes supercoiled DNA. Performs the decatenation events required during the replication of a circular DNA molecule K02622 - - 2.851e-275 863.0
DYD1_k127_3970147_10 YHS domain protein - - - 0.0000000000000000000000000000000000000000000326 165.0
DYD1_k127_3970147_11 - - - - 0.00000000000000000000000000000000000000000003917 176.0
DYD1_k127_3970147_13 Evidence 4 Homologs of previously reported genes of - - - 0.00000000000000000000000000000000002505 151.0
DYD1_k127_3970147_14 HicA toxin of bacterial toxin-antitoxin, - - - 0.00000000000000000000000000000002537 126.0
DYD1_k127_3970147_15 sequence-specific DNA binding K01239,K02855,K07506,K18199 - 3.2.2.1,4.2.1.103 0.00000000000000000000000000006595 116.0
DYD1_k127_3970147_16 PFAM Uncharacterised protein family UPF0150 - - - 0.000000000000000000000003172 102.0
DYD1_k127_3970147_17 - - - - 0.00000000000000000000001114 104.0
DYD1_k127_3970147_18 PFAM conserved - - - 0.0000000005207 62.0
DYD1_k127_3970147_2 Topoisomerase IV is essential for chromosome segregation. It relaxes supercoiled DNA. Performs the decatenation events required during the replication of a circular DNA molecule K02621 - - 4.175e-266 841.0
DYD1_k127_3970147_3 methyltransferase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001294 438.0
DYD1_k127_3970147_4 Amidohydrolase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002761 406.0
DYD1_k127_3970147_5 Enoyl-(Acyl carrier protein) reductase K00059 - 1.1.1.100 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003023 399.0
DYD1_k127_3970147_6 Nitroreductase family - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000004042 294.0
DYD1_k127_3970147_7 Protein conserved in bacteria - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000132 276.0
DYD1_k127_3970147_8 SnoaL-like polyketide cyclase - - - 0.000000000000000000000000000000000000000000000000000000000000000000001072 237.0
DYD1_k127_3970147_9 - - - - 0.000000000000000000000000000000000000000000000000000000000000000009215 239.0
DYD1_k127_3974291_0 Hydrolase CocE NonD family K06978 - - 3.527e-241 758.0
DYD1_k127_3974291_1 Belongs to the amidase family K02433 - 6.3.5.6,6.3.5.7 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001737 540.0
DYD1_k127_3974291_10 lactoylglutathione lyase activity - - - 0.00000000000000000000000000000000000000000000000000000000000000000000001339 244.0
DYD1_k127_3974291_11 AraC-like ligand binding domain - - - 0.0000000000000000000000000000000000000000000000000000000000000001775 226.0
DYD1_k127_3974291_12 oxidoreductase - - - 0.0000000000000000000000000000000000000000000000000000000000000002949 232.0
DYD1_k127_3974291_13 LysR substrate binding domain - - - 0.0000000000000000000000000000000000000000000000000000000000002837 222.0
DYD1_k127_3974291_14 Catalyzes the conversion of maleate to fumarate K01799,K06033 - 4.1.1.76,5.2.1.1 0.00000000000000000000000000000000000000000000000000000005203 208.0
DYD1_k127_3974291_15 Haem-degrading - - - 0.0000000000000000000000000000000000000000000000005932 179.0
DYD1_k127_3974291_16 Isoprenylcysteine carboxyl methyltransferase (ICMT) family - - - 0.00000000000000000000000000000000000000000000000356 182.0
DYD1_k127_3974291_17 Sulfite exporter TauE/SafE K07090 - - 0.0000000000000000000000000000000000000193 155.0
DYD1_k127_3974291_18 aconitate hydratase - - - 0.00000000000000000000000000000002241 128.0
DYD1_k127_3974291_19 AraC-like ligand binding domain - - - 0.0000000000000000000000000000007578 134.0
DYD1_k127_3974291_2 Putative serine dehydratase domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001784 443.0
DYD1_k127_3974291_20 Succinylglutamate desuccinylase K06987 - - 0.00000000000000000000000005987 119.0
DYD1_k127_3974291_21 AraC-like ligand binding domain - - - 0.000000000000000000005883 104.0
DYD1_k127_3974291_22 Bacterial extracellular solute-binding protein K22003 - 5.3.3.7 0.000000000000000009102 93.0
DYD1_k127_3974291_3 Belongs to the DapA family K01714 - 4.3.3.7 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000833 389.0
DYD1_k127_3974291_4 NMT1-like family K07080 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000335 366.0
DYD1_k127_3974291_5 Alpha/beta hydrolase of unknown function (DUF1100) - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000109 342.0
DYD1_k127_3974291_6 Amidohydrolase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002589 326.0
DYD1_k127_3974291_7 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001093 332.0
DYD1_k127_3974291_8 Cupin 2, conserved barrel domain protein K11312 - - 0.000000000000000000000000000000000000000000000000000000000000000000000001604 253.0
DYD1_k127_3974291_9 TIGRFAM acetolactate synthase, large subunit, biosynthetic type K01652 - 2.2.1.6 0.000000000000000000000000000000000000000000000000000000000000000000000006772 265.0
DYD1_k127_3996072_0 PFAM Glycoside hydrolase family 65, central catalytic - - - 0.0 1028.0
DYD1_k127_3996072_1 Protein of unknown function (DUF3417) K00688 - 2.4.1.1 2.607e-253 792.0
DYD1_k127_3996072_10 Tripartite tricarboxylate transporter family receptor - - - 0.00000000000000000000000000000000000000000000000000000000000000000000001034 254.0
DYD1_k127_3996072_11 Pilin (bacterial filament) K02650 - - 0.00000000000000000000000000000000000000000000000000001863 192.0
DYD1_k127_3996072_12 KR domain K00059 - 1.1.1.100 0.0000000000000000000000000000000000000000000000008931 183.0
DYD1_k127_3996072_13 membrane - - - 0.000000000000000000000000000000000000000000000003157 177.0
DYD1_k127_3996072_14 PFAM short-chain dehydrogenase reductase SDR - - - 0.0000000000000000000000000000000000000000001563 169.0
DYD1_k127_3996072_15 Short-chain dehydrogenase reductase SDR K00059 - 1.1.1.100 0.000000000000000000000000000000000000000009441 162.0
DYD1_k127_3996072_16 - - - - 0.00000000000000000000000000000000000000009803 160.0
DYD1_k127_3996072_17 PFAM Uncharacterised ACR, COG1259 K08999 - - 0.0000000000000000000000000000000000000401 149.0
DYD1_k127_3996072_18 COG0457 FOG TPR repeat - - - 0.0000000000000000000000000000000000002779 154.0
DYD1_k127_3996072_19 Tripartite ATP-independent periplasmic transporters, DctQ component - - - 0.000000000000000000000000000000000005066 143.0
DYD1_k127_3996072_2 BT1 family - - - 1.342e-235 740.0
DYD1_k127_3996072_20 Antioxidant protein with alkyl hydroperoxidase activity. Required for the reduction of the AhpC active site cysteine residues and for the regeneration of the AhpC enzyme activity K01607 - 4.1.1.44 0.0000000000000000000000000000000007439 137.0
DYD1_k127_3996072_21 - - - - 0.000000000000000000000000000001925 128.0
DYD1_k127_3996072_22 Psort location Cytoplasmic, score 8.87 - - - 0.00000000000003389 84.0
DYD1_k127_3996072_3 C4-dicarboxylate ABC transporter permease - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002549 463.0
DYD1_k127_3996072_4 Bacterial extracellular solute-binding protein, family 7 - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004649 426.0
DYD1_k127_3996072_5 Transaldolase is important for the balance of metabolites in the pentose-phosphate pathway K01810,K13810 - 2.2.1.2,5.3.1.9 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009099 396.0
DYD1_k127_3996072_6 Protein conserved in bacteria K07793 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007612 351.0
DYD1_k127_3996072_7 Thiamine pyrophosphate enzyme, central domain K01652 - 2.2.1.6 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000126 362.0
DYD1_k127_3996072_8 Enoyl-(Acyl carrier protein) reductase K00059 - 1.1.1.100 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000002411 301.0
DYD1_k127_3996072_9 Tripartite tricarboxylate transporter family receptor - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000002967 273.0
DYD1_k127_4042175_0 Belongs to the TPP enzyme family K01652 - 2.2.1.6 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003934 545.0
DYD1_k127_4042175_1 Belongs to the short-chain dehydrogenases reductases (SDR) family - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003997 395.0
DYD1_k127_4042175_2 dehydratase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007744 342.0
DYD1_k127_4042175_3 PFAM SMP-30 Gluconolaconase LRE-like region K01053 - 3.1.1.17 0.00000000000000000000000000000000000000000000000000000000000000000000000002644 262.0
DYD1_k127_4042175_4 TIGRFAM acetyl coenzyme A synthetase (ADP forming), alpha domain K01905,K22224 - 6.2.1.13 0.00000000000000000000000000000000000000000000000000000000000000000000001029 252.0
DYD1_k127_4042175_5 PFAM Phosphatidylethanolamine-binding protein K06910 - - 0.00000000000000000000000000000000000000000000000000000000000000000000002534 247.0
DYD1_k127_4042175_6 Redoxin K03386 - 1.11.1.15 0.0000000000000000000000000000000000000000000000000000000000000000000002028 242.0
DYD1_k127_4042175_7 SMP-30/Gluconolaconase/LRE-like region K01053 - 3.1.1.17 0.0000000000000000000000000000002379 134.0
DYD1_k127_4042175_8 Zinc-binding dehydrogenase K00153 GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0044424,GO:0044464 1.1.1.306 0.00008963 47.0
DYD1_k127_4090709_0 A type II topoisomerase that negatively supercoils closed circular double-stranded (ds) DNA in an ATP-dependent manner to modulate DNA topology and maintain chromosomes in an underwound state. Negative supercoiling favors strand separation, and DNA replication, transcription, recombination and repair, all of which involve strand separation. Also able to catalyze the interconversion of other topological isomers of dsDNA rings, including catenanes and knotted rings. Type II topoisomerases break and join 2 DNA strands simultaneously in an ATP-dependent manner K02470 - 5.99.1.3 0.0 1195.0
DYD1_k127_4090709_1 dna topoisomerase III K03169 - 5.99.1.2 0.0 1083.0
DYD1_k127_4090709_10 Confers DNA tethering and processivity to DNA polymerases and other proteins. Acts as a clamp, forming a ring around DNA (a reaction catalyzed by the clamp-loading complex) which diffuses in an ATP-independent manner freely and bidirectionally along dsDNA. Initially characterized for its ability to contact the catalytic subunit of DNA polymerase III (Pol III), a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria K02338 - 2.7.7.7 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000123 481.0
DYD1_k127_4090709_11 Specifically methylates the cytosine at position 967 (m5C967) of 16S rRNA K03500 - 2.1.1.176 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000163 483.0
DYD1_k127_4090709_12 PFAM Cobyrinic acid a,c-diamide synthase K03496 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003076 405.0
DYD1_k127_4090709_13 it plays a direct role in the translocation of protons across the membrane K02108 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001601 397.0
DYD1_k127_4090709_14 DNA protecting protein DprA K04096 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002958 399.0
DYD1_k127_4090709_15 Attaches a formyl group to the free amino group of methionyl-tRNA(fMet). The formyl group appears to play a dual role in the initiator identity of N-formylmethionyl-tRNA by promoting its recognition by IF2 and preventing the misappropriation of this tRNA by the elongation apparatus K00604 - 2.1.2.9 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000129 337.0
DYD1_k127_4090709_16 Belongs to the ParB family K03497 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001864 314.0
DYD1_k127_4090709_17 PFAM Peptidoglycan-binding LysM - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001349 319.0
DYD1_k127_4090709_18 Removes the formyl group from the N-terminal Met of newly synthesized proteins. Requires at least a dipeptide for an efficient rate of reaction. N-terminal L-methionine is a prerequisite for activity but the enzyme has broad specificity at other positions K01462 - 3.5.1.88 0.00000000000000000000000000000000000000000000000000000000000000000000001086 246.0
DYD1_k127_4090709_19 rRNA small subunit methyltransferase G K03501 - 2.1.1.170 0.000000000000000000000000000000000000000000000000000000000000009628 222.0
DYD1_k127_4090709_2 NAD-binding protein involved in the addition of a carboxymethylaminomethyl (cmnm) group at the wobble position (U34) of certain tRNAs, forming tRNA-cmnm(5)s(2)U34 K03495 - - 4.615e-305 945.0
DYD1_k127_4090709_20 Belongs to the glyceraldehyde-3-phosphate dehydrogenase family K00134 GO:0000166,GO:0000226,GO:0001817,GO:0001819,GO:0001906,GO:0001907,GO:0002376,GO:0002791,GO:0002793,GO:0003674,GO:0003824,GO:0004365,GO:0004857,GO:0004866,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005634,GO:0005635,GO:0005737,GO:0005811,GO:0005829,GO:0005856,GO:0005886,GO:0005975,GO:0005996,GO:0006006,GO:0006007,GO:0006082,GO:0006090,GO:0006091,GO:0006094,GO:0006096,GO:0006139,GO:0006163,GO:0006164,GO:0006165,GO:0006417,GO:0006464,GO:0006725,GO:0006732,GO:0006733,GO:0006734,GO:0006735,GO:0006753,GO:0006754,GO:0006757,GO:0006793,GO:0006796,GO:0006807,GO:0006915,GO:0006950,GO:0006952,GO:0006955,GO:0006959,GO:0006996,GO:0007010,GO:0007017,GO:0008017,GO:0008092,GO:0008150,GO:0008152,GO:0008219,GO:0009056,GO:0009058,GO:0009108,GO:0009117,GO:0009123,GO:0009124,GO:0009126,GO:0009127,GO:0009132,GO:0009135,GO:0009141,GO:0009142,GO:0009144,GO:0009145,GO:0009150,GO:0009152,GO:0009156,GO:0009161,GO:0009165,GO:0009166,GO:0009167,GO:0009168,GO:0009179,GO:0009185,GO:0009199,GO:0009201,GO:0009205,GO:0009206,GO:0009259,GO:0009260,GO:0009435,GO:0009605,GO:0009607,GO:0009620,GO:0009889,GO:0009890,GO:0009892,GO:0009894,GO:0009987,GO:0010033,GO:0010466,GO:0010468,GO:0010506,GO:0010556,GO:0010558,GO:0010605,GO:0010608,GO:0010629,GO:0010941,GO:0010942,GO:0010951,GO:0012501,GO:0012505,GO:0015630,GO:0015631,GO:0016020,GO:0016043,GO:0016051,GO:0016052,GO:0016053,GO:0016241,GO:0016310,GO:0016491,GO:0016620,GO:0016740,GO:0016769,GO:0016903,GO:0017014,GO:0017144,GO:0017148,GO:0018119,GO:0018130,GO:0018193,GO:0018198,GO:0019222,GO:0019318,GO:0019319,GO:0019320,GO:0019359,GO:0019362,GO:0019363,GO:0019438,GO:0019439,GO:0019538,GO:0019637,GO:0019674,GO:0019693,GO:0019730,GO:0019752,GO:0019828,GO:0019904,GO:0030162,GO:0030234,GO:0030414,GO:0031090,GO:0031323,GO:0031324,GO:0031326,GO:0031327,GO:0031329,GO:0031341,GO:0031343,GO:0031640,GO:0031647,GO:0031965,GO:0031967,GO:0031975,GO:0032268,GO:0032269,GO:0032787,GO:0032879,GO:0032880,GO:0032991,GO:0034097,GO:0034248,GO:0034249,GO:0034341,GO:0034404,GO:0034641,GO:0034654,GO:0034655,GO:0035605,GO:0035606,GO:0035821,GO:0036094,GO:0036211,GO:0042221,GO:0042802,GO:0042866,GO:0042981,GO:0043065,GO:0043067,GO:0043068,GO:0043086,GO:0043170,GO:0043207,GO:0043226,GO:0043227,GO:0043228,GO:0043229,GO:0043231,GO:0043232,GO:0043412,GO:0043436,GO:0043891,GO:0043900,GO:0043902,GO:0043903,GO:0044003,GO:0044004,GO:0044068,GO:0044092,GO:0044237,GO:0044238,GO:0044248,GO:0044249,GO:0044260,GO:0044267,GO:0044270,GO:0044271,GO:0044281,GO:0044282,GO:0044283,GO:0044364,GO:0044403,GO:0044419,GO:0044422,GO:0044424,GO:0044428,GO:0044444,GO:0044446,GO:0044464,GO:0044531,GO:0044532,GO:0044533,GO:0045087,GO:0045861,GO:0046031,GO:0046034,GO:0046364,GO:0046365,GO:0046390,GO:0046394,GO:0046434,GO:0046483,GO:0046496,GO:0046700,GO:0046939,GO:0048037,GO:0048518,GO:0048519,GO:0048522,GO:0048523,GO:0050662,GO:0050707,GO:0050708,GO:0050714,GO:0050715,GO:0050789,GO:0050790,GO:0050794,GO:0050821,GO:0050832,GO:0050896,GO:0051046,GO:0051047,GO:0051049,GO:0051050,GO:0051171,GO:0051172,GO:0051186,GO:0051188,GO:0051222,GO:0051223,GO:0051239,GO:0051240,GO:0051246,GO:0051248,GO:0051287,GO:0051336,GO:0051346,GO:0051402,GO:0051701,GO:0051702,GO:0051704,GO:0051707,GO:0051709,GO:0051712,GO:0051716,GO:0051817,GO:0051818,GO:0051851,GO:0051852,GO:0051873,GO:0051883,GO:0052040,GO:0052042,GO:0052248,GO:0052330,GO:0052433,GO:0052501,GO:0052547,GO:0052548,GO:0055086,GO:0055114,GO:0060255,GO:0061134,GO:0061135,GO:0061615,GO:0061620,GO:0061621,GO:0061718,GO:0061844,GO:0065007,GO:0065008,GO:0065009,GO:0070201,GO:0070887,GO:0070997,GO:0071310,GO:0071345,GO:0071346,GO:0071704,GO:0071840,GO:0071944,GO:0072330,GO:0072521,GO:0072522,GO:0072524,GO:0072525,GO:0080090,GO:0090087,GO:0090407,GO:0097159,GO:0097452,GO:0097718,GO:0098542,GO:0098772,GO:0140096,GO:1901135,GO:1901137,GO:1901265,GO:1901292,GO:1901293,GO:1901360,GO:1901361,GO:1901362,GO:1901363,GO:1901564,GO:1901566,GO:1901575,GO:1901576,GO:1903530,GO:1903532,GO:1904951,GO:1990904,GO:2000112,GO:2000113 1.2.1.12 0.00000000000000000000000000000000000000000000000000000000005027 206.0
DYD1_k127_4090709_21 F(1)F(0) ATP synthase produces ATP from ADP in the presence of a proton or sodium gradient. F-type ATPases consist of two structural domains, F(1) containing the extramembraneous catalytic core and F(0) containing the membrane proton channel, linked together by a central stalk and a peripheral stalk. During catalysis, ATP synthesis in the catalytic domain of F(1) is coupled via a rotary mechanism of the central stalk subunits to proton translocation K02109 - - 0.00000000000000000000000000000000000000000000000008488 182.0
DYD1_k127_4090709_22 F(1)F(0) ATP synthase produces ATP from ADP in the presence of a proton or sodium gradient. F-type ATPases consist of two structural domains, F(1) containing the extramembraneous catalytic core and F(0) containing the membrane proton channel, linked together by a central stalk and a peripheral stalk. During catalysis, ATP synthesis in the catalytic domain of F(1) is coupled via a rotary mechanism of the central stalk subunits to proton translocation K02113 - - 0.00000000000000000000000000000000000000001139 159.0
DYD1_k127_4090709_23 Domain of unknown function (DUF4390) - - - 0.0000000000000000000000000000000000000005884 163.0
DYD1_k127_4090709_24 F(1)F(0) ATP synthase produces ATP from ADP in the presence of a proton or sodium gradient. F-type ATPases consist of two structural domains, F(1) containing the extramembraneous catalytic core and F(0) containing the membrane proton channel, linked together by a central stalk and a peripheral stalk. During catalysis, ATP synthesis in the catalytic domain of F(1) is coupled via a rotary mechanism of the central stalk subunits to proton translocation K02110 - - 0.0000000000000000000000000000000000003962 141.0
DYD1_k127_4090709_25 Belongs to the bacterial ribosomal protein bL34 family K02914 - - 0.000000000000001769 77.0
DYD1_k127_4090709_26 RNaseP catalyzes the removal of the 5'-leader sequence from pre-tRNA to produce the mature 5'-terminus. It can also cleave other RNA substrates such as 4.5S RNA. The protein component plays an auxiliary but essential role in vivo by binding to the 5'-leader sequence and broadening the substrate specificity of the ribozyme K03536 - 3.1.26.5 0.000000000000002638 81.0
DYD1_k127_4090709_27 Produces ATP from ADP in the presence of a proton gradient across the membrane. The gamma chain is believed to be important in regulating ATPase activity and the flow of protons through the CF(0) complex K02115 - - 0.000000000001975 67.0
DYD1_k127_4090709_28 ATP synthase I chain - - - 0.0009013 48.0
DYD1_k127_4090709_3 Catalyzes the transfer of a two-carbon ketol group from a ketose donor to an aldose acceptor, via a covalent intermediate with the cofactor thiamine pyrophosphate K00615 - 2.2.1.1 4.704e-295 918.0
DYD1_k127_4090709_4 Produces ATP from ADP in the presence of a proton gradient across the membrane. The alpha chain is a regulatory subunit K02111 - 3.6.3.14 2.655e-274 850.0
DYD1_k127_4090709_5 Histidine kinase - - - 8.292e-239 761.0
DYD1_k127_4090709_6 Required for the insertion and or proper folding and or complex formation of integral membrane proteins into the membrane. Involved in integration of membrane proteins that insert both dependently and independently of the Sec translocase complex, as well as at least some lipoproteins. Aids folding of multispanning membrane proteins K03217 - - 7.426e-212 672.0
DYD1_k127_4090709_7 it binds specifically double-stranded DNA at a 9 bp consensus (dnaA box) 5'-TTATC CA A CA A-3'. DnaA binds to ATP and to acidic phospholipids K02313 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004624 619.0
DYD1_k127_4090709_8 Sigma-54 interaction domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001607 539.0
DYD1_k127_4090709_9 Exhibits a very high intrinsic GTPase hydrolysis rate. Involved in the addition of a carboxymethylaminomethyl (cmnm) group at the wobble position (U34) of certain tRNAs, forming tRNA- cmnm(5)s(2)U34 K03650 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001922 531.0
DYD1_k127_4093026_0 Component of the pyruvate dehydrogenase (PDH) complex, that catalyzes the overall conversion of pyruvate to acetyl-CoA and CO(2) K00163 - 1.2.4.1 0.0 1418.0
DYD1_k127_4093026_1 poly(R)-hydroxyalkanoic acid synthase K03821 - - 4.527e-256 803.0
DYD1_k127_4093026_10 The glycine cleavage system catalyzes the degradation of glycine. The P protein binds the alpha-amino group of glycine through its pyridoxal phosphate cofactor K00282 - 1.4.4.2 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000394 601.0
DYD1_k127_4093026_11 COG1960 Acyl-CoA dehydrogenases K00253 - 1.3.8.4 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008448 598.0
DYD1_k127_4093026_12 The pyruvate dehydrogenase complex catalyzes the overall conversion of pyruvate to acetyl-CoA and CO(2) K00627 - 2.3.1.12 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001526 535.0
DYD1_k127_4093026_13 PFAM PfkB domain protein K00852,K00856 - 2.7.1.15,2.7.1.20 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002293 485.0
DYD1_k127_4093026_14 Glycine cleavage T-protein C-terminal barrel domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000336 458.0
DYD1_k127_4093026_15 Oxidoreductase FAD-binding domain K00523 - 1.17.1.1 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003858 444.0
DYD1_k127_4093026_16 The glycine cleavage system catalyzes the degradation of glycine K00605 GO:0001505,GO:0003674,GO:0003824,GO:0004047,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006082,GO:0006520,GO:0006544,GO:0006546,GO:0006807,GO:0008150,GO:0008152,GO:0008168,GO:0009056,GO:0009063,GO:0009069,GO:0009071,GO:0009987,GO:0016054,GO:0016740,GO:0016741,GO:0017144,GO:0019464,GO:0019752,GO:0032259,GO:0042133,GO:0042135,GO:0042737,GO:0043436,GO:0044237,GO:0044238,GO:0044248,GO:0044281,GO:0044282,GO:0044424,GO:0044444,GO:0044464,GO:0046395,GO:0065007,GO:0065008,GO:0071704,GO:1901564,GO:1901565,GO:1901575,GO:1901605,GO:1901606 2.1.2.10 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003918 428.0
DYD1_k127_4093026_17 Histidine kinase K08082 - 2.7.13.3 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006767 396.0
DYD1_k127_4093026_18 COG0119 Isopropylmalate homocitrate citramalate synthases K01640 - 4.1.3.4 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001324 398.0
DYD1_k127_4093026_19 Tetrapolymerization of the monopyrrole PBG into the hydroxymethylbilane pre-uroporphyrinogen in several discrete steps K01749 - 2.5.1.61 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001777 380.0
DYD1_k127_4093026_2 Acetyl-CoA carboxylase, carboxyltransferase component (subunits alpha and beta) K01969 - 6.4.1.4 4.84e-256 799.0
DYD1_k127_4093026_20 Eukaryotic DNA topoisomerase I, catalytic core K03168 - 5.99.1.2 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001491 381.0
DYD1_k127_4093026_21 PFAM NAD-dependent epimerase dehydratase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001544 349.0
DYD1_k127_4093026_22 Hydrolyzes diadenosine 5',5'''-P1,P4-tetraphosphate to yield ADP K01525 - 3.6.1.41 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003537 346.0
DYD1_k127_4093026_23 HemY protein N-terminus K02498 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005674 340.0
DYD1_k127_4093026_24 Belongs to the short-chain dehydrogenases reductases (SDR) family - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002639 325.0
DYD1_k127_4093026_25 Belongs to the enoyl-CoA hydratase isomerase family K01715 - 4.2.1.17 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000115 317.0
DYD1_k127_4093026_26 TIGRFAM phytoene desaturase K10027 - 1.3.99.26,1.3.99.28,1.3.99.29,1.3.99.31 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004583 321.0
DYD1_k127_4093026_27 uroporphyrinogen III synthase K01719 - 4.2.1.75 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006486 306.0
DYD1_k127_4093026_28 Ribosomal protein L11 methyltransferase K02687 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002086 306.0
DYD1_k127_4093026_29 response regulator K08083 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000004658 294.0
DYD1_k127_4093026_3 The glycine cleavage system catalyzes the degradation of glycine. The P protein binds the alpha-amino group of glycine through its pyridoxal phosphate cofactor K00283 - 1.4.4.2 3.791e-238 753.0
DYD1_k127_4093026_30 2-nitropropane dioxygenase K00459 - 1.13.12.16 0.0000000000000000000000000000000000000000000000000000000000000000000000000000007617 276.0
DYD1_k127_4093026_31 Enoyl-CoA hydratase/isomerase K13766 - 4.2.1.18 0.00000000000000000000000000000000000000000000000000000000000000000000000000002815 267.0
DYD1_k127_4093026_32 DSBA-like thioredoxin domain K14584 - 5.99.1.4 0.00000000000000000000000000000000000000000000000000000000000000000000000006207 256.0
DYD1_k127_4093026_33 Catalyzes the reversible adenylation of nicotinate mononucleotide (NaMN) to nicotinic acid adenine dinucleotide (NaAD) K00969 - 2.7.7.18 0.00000000000000000000000000000000000000000000000000000000000000000000001057 248.0
DYD1_k127_4093026_34 Thiol-specific peroxidase that catalyzes the reduction of hydrogen peroxide and organic hydroperoxides to water and alcohols, respectively. Plays a role in cell protection against oxidative stress by detoxifying peroxides K11065 GO:0003674,GO:0003824,GO:0004601,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006950,GO:0006979,GO:0008150,GO:0008152,GO:0008379,GO:0009636,GO:0009987,GO:0016209,GO:0016491,GO:0016667,GO:0016671,GO:0016684,GO:0032843,GO:0033554,GO:0034599,GO:0042221,GO:0044424,GO:0044444,GO:0044464,GO:0050896,GO:0051716,GO:0051920,GO:0055114,GO:0070887,GO:0097237,GO:0098754,GO:0098869,GO:1990748 1.11.1.15 0.0000000000000000000000000000000000000000000000000000000000000000005491 235.0
DYD1_k127_4093026_35 enzyme of heme biosynthesis K02496,K13543 - 2.1.1.107,4.2.1.75 0.000000000000000000000000000000000000000000000000000000000000000002545 242.0
DYD1_k127_4093026_36 Maf-like protein K06287 - - 0.00000000000000000000000000000000000000000000000000000000000000009347 228.0
DYD1_k127_4093026_37 Appr-1'-p processing enzyme - - - 0.000000000000000000000000000000000000000000000000000000000000001301 222.0
DYD1_k127_4093026_38 COG3245 Cytochrome c5 - - - 0.00000000000000000000000000000000000000000000000000000000000001372 226.0
DYD1_k127_4093026_39 GDSL-like Lipase/Acylhydrolase family - - - 0.000000000000000000000000000000000000000000000000000000000004573 222.0
DYD1_k127_4093026_4 PFAM Carbamoyl-phosphate synthase L chain ATP-binding K01961 GO:0003674,GO:0003824,GO:0004075,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006082,GO:0006629,GO:0006631,GO:0006633,GO:0008150,GO:0008152,GO:0008610,GO:0009058,GO:0009889,GO:0009890,GO:0009892,GO:0009987,GO:0010565,GO:0016053,GO:0016874,GO:0016879,GO:0019216,GO:0019217,GO:0019222,GO:0019752,GO:0031323,GO:0031324,GO:0031326,GO:0031327,GO:0032787,GO:0042304,GO:0043436,GO:0044237,GO:0044238,GO:0044249,GO:0044255,GO:0044281,GO:0044283,GO:0044424,GO:0044444,GO:0044464,GO:0045717,GO:0045833,GO:0045922,GO:0046394,GO:0046890,GO:0048519,GO:0048523,GO:0050789,GO:0050794,GO:0051055,GO:0062012,GO:0062014,GO:0065007,GO:0071704,GO:0072330,GO:0080090,GO:1901576 6.3.4.14,6.4.1.2 1.174e-236 737.0
DYD1_k127_4093026_40 Catalyzes a trans-dehydration via an enolate intermediate K03786 - 4.2.1.10 0.000000000000000000000000000000000000000000000000000000007047 202.0
DYD1_k127_4093026_41 Channel that opens in response to stretch forces in the membrane lipid bilayer. May participate in the regulation of osmotic pressure changes within the cell K03282 - - 0.00000000000000000000000000000000000000000000000000000006656 201.0
DYD1_k127_4093026_42 Biotin-requiring enzyme K02160 - - 0.00000000000000000000000000000000000000000000000000000006677 199.0
DYD1_k127_4093026_43 Protein of unknown function (DUF2889) - - - 0.0000000000000000000000000000000000000000000000000000001327 207.0
DYD1_k127_4093026_44 Belongs to the sigma-70 factor family. ECF subfamily K03088 - - 0.000000000000000000000000000000000000000000000000000005325 195.0
DYD1_k127_4093026_45 The glycine cleavage system catalyzes the degradation of glycine. The H protein shuttles the methylamine group of glycine from the P protein to the T protein K02437 - - 0.000000000000000000000000000000000000000000000000001076 185.0
DYD1_k127_4093026_46 Specifically methylates the pseudouridine at position 1915 (m3Psi1915) in 23S rRNA K00783 - 2.1.1.177 0.0000000000000000000000000000000000000000000000000108 184.0
DYD1_k127_4093026_48 Recycling of diacylglycerol produced during the turnover of membrane phospholipid K00901 - 2.7.1.107 0.0000000000000000000000000000000000000000002078 164.0
DYD1_k127_4093026_49 Thioredoxin-like - - - 0.000000000000000000000000000000000000000002607 162.0
DYD1_k127_4093026_5 Translation, ribosomal structure and biogenesis K08301 - - 3.047e-224 703.0
DYD1_k127_4093026_50 Protein of unknown function (DUF3426) - - - 0.000000000000000000000000000000000000000008619 164.0
DYD1_k127_4093026_51 Glutathione-dependent formaldehyde-activating - - - 0.0000000000000000000000000000000000000001653 153.0
DYD1_k127_4093026_52 Functions as a ribosomal silencing factor. Interacts with ribosomal protein L14 (rplN), blocking formation of intersubunit bridge B8. Prevents association of the 30S and 50S ribosomal subunits and the formation of functional ribosomes, thus repressing translation K09710 - - 0.00000000000000000000000000000000000005573 145.0
DYD1_k127_4093026_53 protein involved in tolerance to divalent cations K03926 - - 0.000000000000000000000000000000000019 139.0
DYD1_k127_4093026_54 helix_turn_helix, mercury resistance - - - 0.00000000000000000000000000000000009752 137.0
DYD1_k127_4093026_55 YGGT family K02221 - - 0.0000000000000000000000000000003459 126.0
DYD1_k127_4093026_56 - - - - 0.0000000000000000000000000000004556 127.0
DYD1_k127_4093026_57 MAPEG family - - - 0.00000000000000000000000000003485 123.0
DYD1_k127_4093026_58 COG0526, thiol-disulfide isomerase and thioredoxins - - - 0.000000000000000000007905 99.0
DYD1_k127_4093026_59 PFAM Fructosamine - - - 0.0000000000000000006181 90.0
DYD1_k127_4093026_6 Thi4 family - - - 4.613e-223 703.0
DYD1_k127_4093026_60 - - - - 0.00000000000000003644 83.0
DYD1_k127_4093026_61 Belongs to the UPF0235 family K09131 - - 0.0000000000000001344 85.0
DYD1_k127_4093026_62 - - - - 0.0000000000004449 68.0
DYD1_k127_4093026_63 alginic acid biosynthetic process K10297 - - 0.000005367 48.0
DYD1_k127_4093026_7 Oxidoreductase - - - 1.909e-222 700.0
DYD1_k127_4093026_8 argininosuccinate lyase K01755 - 4.3.2.1 1.343e-213 671.0
DYD1_k127_4093026_9 Required to facilitate the formation of correct disulfide bonds in some periplasmic proteins and for the assembly of the periplasmic c-type cytochromes. Acts by transferring electrons from cytoplasmic thioredoxin to the periplasm. This transfer involves a cascade of disulfide bond formation and reduction steps K04084 - 1.8.1.8 2.071e-204 655.0
DYD1_k127_4097137_0 Belongs to the binding-protein-dependent transport system permease family K01998 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002043 472.0
DYD1_k127_4097137_1 ATPases associated with a variety of cellular activities K01996 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000159 378.0
DYD1_k127_4097137_2 Belongs to the binding-protein-dependent transport system permease family K01995,K01998 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005152 317.0
DYD1_k127_4097137_3 NMT1/THI5 like - - - 0.0000000000000000000000000000000000000000000000000000000000003237 225.0
DYD1_k127_4097137_4 Belongs to the UbiD family K03182,K16874 - 4.1.1.98 0.000000000000000000000000000000000000000000000000278 179.0
DYD1_k127_4097137_5 Ornithine cyclodeaminase/mu-crystallin family K01750 - 4.3.1.12 0.0000000000000000000000000000000000003862 153.0
DYD1_k127_4112614_0 MMPL family - - - 0.0 1317.0
DYD1_k127_4112614_1 Efflux pump membrane transporter K03296,K18138 - - 3.064e-209 660.0
DYD1_k127_4112614_10 Catalytic LigB subunit of aromatic ring-opening dioxygenase K15777 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000163 314.0
DYD1_k127_4112614_11 Bacterial regulatory helix-turn-helix protein, lysR family - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000001628 301.0
DYD1_k127_4112614_12 Periplasmic binding proteins and sugar binding domain of LacI family K10439 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000002725 286.0
DYD1_k127_4112614_13 Pfam Nitroreductase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000007719 251.0
DYD1_k127_4112614_14 SNARE associated Golgi protein K03975 - - 0.0000000000000000000000000000000000000000000000000000000000000000000002861 248.0
DYD1_k127_4112614_15 Membrane K15977 - - 0.0000000000000000000000000000000000000000003066 162.0
DYD1_k127_4112614_16 Barrel-sandwich domain of CusB or HlyD membrane-fusion K03585 - - 0.0000000000000000000006219 98.0
DYD1_k127_4112614_17 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily - - - 0.000000000000000000002117 100.0
DYD1_k127_4112614_18 SNARE associated Golgi protein - - - 0.0000000009374 59.0
DYD1_k127_4112614_2 Belongs to the monovalent cation proton antiporter 2 (CPA2) transporter (TC 2.A.37) family K03455,K11745,K11747 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006859 606.0
DYD1_k127_4112614_3 Glutathione S-Transferase K07393 - 1.8.5.7 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002155 497.0
DYD1_k127_4112614_4 ABC transporter substrate-binding protein K02030 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005679 399.0
DYD1_k127_4112614_5 Glutathione S-transferase, N-terminal domain K00799,K11209 - 2.5.1.18 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009537 389.0
DYD1_k127_4112614_6 TIGRFAM RND efflux system, outer membrane lipoprotein, NodT family K18139 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003759 396.0
DYD1_k127_4112614_7 Domain present in PSD-95, Dlg, and ZO-1/2. - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007988 365.0
DYD1_k127_4112614_8 Transcriptional regulator - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004866 360.0
DYD1_k127_4112614_9 Belongs to the pirin family K06911 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000893 344.0
DYD1_k127_4135509_0 Catalyzes the formation of phosphoribosylamine from phosphoribosylpyrophosphate (PRPP) and glutamine K00764 - 2.4.2.14 5.007e-247 770.0
DYD1_k127_4135509_1 Belongs to the class-I aminoacyl-tRNA synthetase family K01883 - 6.1.1.16 8.129e-219 687.0
DYD1_k127_4135509_10 Hydrolyzes the pyrophosphate bond of UDP-2,3- diacylglucosamine to yield 2,3-diacylglucosamine 1-phosphate (lipid X) and UMP by catalyzing the attack of water at the alpha-P atom. Involved in the biosynthesis of lipid A, a phosphorylated glycolipid that anchors the lipopolysaccharide to the outer membrane of the cell K03269 - 3.6.1.54 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000398 284.0
DYD1_k127_4135509_11 PPIases accelerate the folding of proteins. It catalyzes the cis-trans isomerization of proline imidic peptide bonds in oligopeptides K03768 - 5.2.1.8 0.000000000000000000000000000000000000000000000000000000000000000000000001007 256.0
DYD1_k127_4135509_12 PPIases accelerate the folding of proteins. It catalyzes the cis-trans isomerization of proline imidic peptide bonds in oligopeptides K01802,K03767,K03768 - 5.2.1.8 0.0000000000000000000000000000000000000000000000000000000000000001495 229.0
DYD1_k127_4135509_13 Mandelate racemase / muconate lactonizing enzyme, C-terminal domain - - - 0.0000000000000000000000000000000000000000000000000000000002447 218.0
DYD1_k127_4135509_14 Colicin V production K03558 - - 0.000000000000000000000000000000000000000007253 163.0
DYD1_k127_4135509_15 Macrocin-O-methyltransferase (TylF) K05303 - - 0.000000000000000000000000000000008761 143.0
DYD1_k127_4135509_16 Sporulation related domain K03749 - - 0.000000000000000000000000006653 117.0
DYD1_k127_4135509_2 Na+ dependent nucleoside transporter N-terminus K03317 GO:0003674,GO:0005215,GO:0005337,GO:0005575,GO:0005623,GO:0005886,GO:0005887,GO:0006810,GO:0008150,GO:0015858,GO:0015931,GO:0015932,GO:0016020,GO:0016021,GO:0022857,GO:0031224,GO:0031226,GO:0044425,GO:0044459,GO:0044464,GO:0051179,GO:0051234,GO:0055085,GO:0071702,GO:0071705,GO:0071944,GO:1901264,GO:1901505,GO:1901642 - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001596 527.0
DYD1_k127_4135509_3 Catalyzes the formation of L-homocysteine from O- succinyl-L-homoserine (OSHS) and hydrogen sulfide K01739,K10764 - 2.5.1.48 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009032 521.0
DYD1_k127_4135509_4 PFAM Mur ligase middle domain protein K11754 - 6.3.2.12,6.3.2.17 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002251 490.0
DYD1_k127_4135509_5 TPR repeat-containing protein - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001803 451.0
DYD1_k127_4135509_6 ErfK YbiS YcfS YnhG family protein - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001483 427.0
DYD1_k127_4135509_7 Component of the acetyl coenzyme A carboxylase (ACC) complex. Biotin carboxylase (BC) catalyzes the carboxylation of biotin on its carrier protein (BCCP) and then the CO(2) group is transferred by the transcarboxylase to acetyl-CoA to form malonyl- CoA K01963 - 2.1.3.15,6.4.1.2 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008468 364.0
DYD1_k127_4135509_8 PFAM TPR repeat-containing protein - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000001846 307.0
DYD1_k127_4135509_9 Methyltransferase domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000041 300.0
DYD1_k127_415577_0 Domain of unknown function (DUF3391) - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009933 368.0
DYD1_k127_415577_1 Amidase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005642 355.0
DYD1_k127_415577_2 NADP oxidoreductase, coenzyme f420-dependent K06988 - 1.5.1.40 0.000000000000000000000000000000000000000000000000000000000000000014 232.0
DYD1_k127_415577_3 - - - - 0.0000000000000000000000000000000000000000000000000000000000000002633 231.0
DYD1_k127_415577_4 COG0457 FOG TPR repeat - - - 0.0000000000000000000000000000000000001106 146.0
DYD1_k127_415577_5 - - - - 0.000000000004237 77.0
DYD1_k127_415577_6 COG0457 FOG TPR repeat - - - 0.0000002007 55.0
DYD1_k127_4162435_0 Belongs to the UbiD family K03182 - 4.1.1.98 4.346e-254 794.0
DYD1_k127_4162435_1 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain K01652 - 2.2.1.6 2.575e-218 692.0
DYD1_k127_4162435_10 GTPase that associates with the 50S ribosomal subunit and may have a role during protein synthesis or ribosome biogenesis K03665 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003177 475.0
DYD1_k127_4162435_11 Luciferase-like monooxygenase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001701 460.0
DYD1_k127_4162435_12 NYN domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003697 409.0
DYD1_k127_4162435_13 Ligates lysine onto the cytidine present at position 34 of the AUA codon-specific tRNA(Ile) that contains the anticodon CAU, in an ATP-dependent manner. Cytidine is converted to lysidine, thus changing the amino acid specificity of the tRNA from methionine to isoleucine K04075 - 6.3.4.19 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001396 403.0
DYD1_k127_4162435_14 Part of the outer membrane protein assembly complex, which is involved in assembly and insertion of beta-barrel proteins into the outer membrane K17713 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003946 388.0
DYD1_k127_4162435_15 Binding-protein-dependent transport system inner membrane component K02011 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002612 384.0
DYD1_k127_4162435_16 Predicted metal-binding integral membrane protein (DUF2182) - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005955 331.0
DYD1_k127_4162435_17 COG3842 ABC-type spermidine putrescine transport systems, ATPase components K02010,K02017,K15497 - 3.6.3.29,3.6.3.30,3.6.3.55 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002682 320.0
DYD1_k127_4162435_18 major facilitator superfamily - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002034 311.0
DYD1_k127_4162435_19 Belongs to the ABC transporter superfamily K02010 - 3.6.3.30 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005952 308.0
DYD1_k127_4162435_2 GTPase that plays an essential role in the late steps of ribosome biogenesis K03977 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003337 616.0
DYD1_k127_4162435_20 DNA repair enzyme involved in the repair of deaminated bases. Selectively cleaves double-stranded DNA at the second phosphodiester bond 3' to a deoxyinosine leaving behind the intact lesion on the nicked DNA K05982 - 3.1.21.7 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000004162 302.0
DYD1_k127_4162435_21 Tripartite tricarboxylate transporter family receptor - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000592 304.0
DYD1_k127_4162435_22 Tripartite tricarboxylate transporter family receptor - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000004939 289.0
DYD1_k127_4162435_23 Protein of unknown function (DUF1326) - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000004043 279.0
DYD1_k127_4162435_24 Dehydrogenase K00031,K00052,K07246 GO:0006082,GO:0006575,GO:0006732,GO:0006793,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009108,GO:0009987,GO:0016053,GO:0019297,GO:0019298,GO:0019752,GO:0032787,GO:0042398,GO:0043436,GO:0044237,GO:0044249,GO:0044281,GO:0044283,GO:0046394,GO:0051186,GO:0051188,GO:0071704,GO:0072330,GO:1901564,GO:1901566,GO:1901576 1.1.1.42,1.1.1.83,1.1.1.85,1.1.1.93,4.1.1.73 0.000000000000000000000000000000000000000000000000000000000000000000000000000003987 274.0
DYD1_k127_4162435_25 protein-L-isoaspartate O-methyltransferase K00573 - 2.1.1.77 0.000000000000000000000000000000000000000000000000000000000000000000000000000005846 266.0
DYD1_k127_4162435_26 Ketopantoate reductase PanE/ApbA C terminal K00077 - 1.1.1.169 0.0000000000000000000000000000000000000000000000000000000000000000000000000003128 270.0
DYD1_k127_4162435_27 Serine aminopeptidase, S33 - - - 0.000000000000000000000000000000000000000000000000000000000000000000000004342 254.0
DYD1_k127_4162435_28 Sir2 family - - - 0.000000000000000000000000000000000000000000000000000000000000000000000007516 250.0
DYD1_k127_4162435_29 acyl-CoA dehydrogenase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000005471 254.0
DYD1_k127_4162435_3 Converts 2C-methyl-D-erythritol 2,4-cyclodiphosphate (ME-2,4cPP) into 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate K03526 - 1.17.7.1,1.17.7.3 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001057 603.0
DYD1_k127_4162435_30 Alpha/beta hydrolase of unknown function (DUF1100) - - - 0.0000000000000000000000000000000000000000000000000000000000000000000001642 259.0
DYD1_k127_4162435_31 Domain of unknown function (DUF1932) - - - 0.000000000000000000000000000000000000000000000000000000000000000000001395 247.0
DYD1_k127_4162435_32 Major role in the synthesis of nucleoside triphosphates other than ATP. The ATP gamma phosphate is transferred to the NDP beta phosphate via a ping-pong mechanism, using a phosphorylated active-site intermediate K00940 - 2.7.4.6 0.0000000000000000000000000000000000000000000000000000000000000000002558 231.0
DYD1_k127_4162435_33 Type IV pilus biogenesis stability protein PilW K02656 - - 0.0000000000000000000000000000000000000000000000000000000000000000004629 239.0
DYD1_k127_4162435_34 alpha/beta hydrolase fold - - - 0.000000000000000000000000000000000000000000000000000000000000000001717 242.0
DYD1_k127_4162435_35 Ketopantoate reductase PanE/ApbA C terminal K00077 - 1.1.1.169 0.0000000000000000000000000000000000000000000000000000000000001044 225.0
DYD1_k127_4162435_36 Adenylyl- / guanylyl cyclase, catalytic domain - - - 0.00000000000000000000000000000000000000000000000000000005104 207.0
DYD1_k127_4162435_37 Tetratricopeptide repeat-like domain - - - 0.0000000000000000000000000000000000000000000000000000006697 199.0
DYD1_k127_4162435_38 Alcohol dehydrogenase zinc-binding domain protein K13953,K18382 - 1.1.1.1 0.0000000000000000000000000000000000000000000000000004721 199.0
DYD1_k127_4162435_39 Protein of unknown function (DUF502) - - - 0.000000000000000000000000000000000000000000000001841 181.0
DYD1_k127_4162435_4 synthetase, class II (G H P K01892 - 6.1.1.21 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001904 600.0
DYD1_k127_4162435_41 Tetratricopeptide repeat - - - 0.000000000000000000000000000000000000000001194 160.0
DYD1_k127_4162435_42 cell redox homeostasis - - - 0.0000000000000000000000000000000000000001729 158.0
DYD1_k127_4162435_43 Transcriptional regulator K15539 - - 0.0000000000000000000000000000000000000007929 162.0
DYD1_k127_4162435_44 Thioesterase - - - 0.000000000000000000000000000000000000006391 149.0
DYD1_k127_4162435_45 RNA chaperone that binds small regulatory RNA (sRNAs) and mRNAs to facilitate mRNA translational regulation in response to envelope stress, environmental stress and changes in metabolite concentrations. Also binds with high specificity to tRNAs K03666 - - 0.00000000000000000000000000000000000001689 145.0
DYD1_k127_4162435_46 ABC-type Fe3 transport system, periplasmic component K02012 - - 0.0000000000002061 82.0
DYD1_k127_4162435_47 - - - - 0.00000000001984 66.0
DYD1_k127_4162435_48 - - - - 0.0000000001234 66.0
DYD1_k127_4162435_49 COG NOG19114 non supervised orthologous group - - - 0.0003512 47.0
DYD1_k127_4162435_5 Gamma-glutamyltranspeptidase K00681 - 2.3.2.2,3.4.19.13 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000618 583.0
DYD1_k127_4162435_6 Specifically methylates position 2 of adenine 2503 in 23S rRNA and position 2 of adenine 37 in tRNAs K06941 - 2.1.1.192 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002663 524.0
DYD1_k127_4162435_7 HflC and HflK could encode or regulate a protease K04088 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001076 522.0
DYD1_k127_4162435_8 Component of the acetyl coenzyme A carboxylase (ACC) complex. First, biotin carboxylase catalyzes the carboxylation of biotin on its carrier protein (BCCP) and then the CO(2) group is transferred by the carboxyltransferase to acetyl-CoA to form malonyl-CoA K01962 - 2.1.3.15,6.4.1.2 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001627 518.0
DYD1_k127_4162435_9 PFAM Isocitrate isopropylmalate dehydrogenase K07246 - 1.1.1.83,1.1.1.93,4.1.1.73 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001478 481.0
DYD1_k127_4175038_0 CoA-binding domain protein K09181 - - 0.0 1073.0
DYD1_k127_4175038_1 SAF - - - 6.204e-207 655.0
DYD1_k127_4175038_10 Protein of unknown function, DUF - - - 0.000000000000000000000000000000000000000000002543 166.0
DYD1_k127_4175038_11 - - - - 0.00000000000000000000000000000000000000004863 155.0
DYD1_k127_4175038_12 - - - - 0.00000000000000000000000000000000000782 142.0
DYD1_k127_4175038_13 - - - - 0.000000000000000000000000000000002791 132.0
DYD1_k127_4175038_14 Metallo-beta-lactamase superfamily - - - 0.000000000000000000000000000004397 131.0
DYD1_k127_4175038_15 Hsp20/alpha crystallin family - - - 0.00000000000000639 75.0
DYD1_k127_4175038_16 Protein of unknown function (DUF2933) - - - 0.00000000000001927 82.0
DYD1_k127_4175038_17 Cytochrome c - - - 0.00000000005157 68.0
DYD1_k127_4175038_2 Belongs to the anaerobic coproporphyrinogen-III oxidase family - GO:0003674,GO:0003824,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006725,GO:0006778,GO:0006779,GO:0006782,GO:0006783,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009987,GO:0016491,GO:0016627,GO:0018130,GO:0019438,GO:0033013,GO:0033014,GO:0034641,GO:0042168,GO:0042440,GO:0044237,GO:0044249,GO:0044271,GO:0044424,GO:0044464,GO:0046148,GO:0046483,GO:0046501,GO:0048037,GO:0051186,GO:0051188,GO:0051536,GO:0051539,GO:0051540,GO:0051989,GO:0055114,GO:0071704,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576 - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001927 601.0
DYD1_k127_4175038_3 Isoprenylcysteine carboxyl methyltransferase (ICMT) family - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002352 334.0
DYD1_k127_4175038_4 COG0664 cAMP-binding proteins - catabolite gene activator and regulatory subunit of cAMP-dependent protein kinases K01420 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009529 311.0
DYD1_k127_4175038_5 - - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000001619 289.0
DYD1_k127_4175038_6 plastoquinol--plastocyanin reductase activity - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000162 257.0
DYD1_k127_4175038_7 Putative MetA-pathway of phenol degradation - - - 0.0000000000000000000000000000000000000000000000000000000002564 213.0
DYD1_k127_4175038_8 Cytochrome C biogenesis protein transmembrane region K09792 - - 0.00000000000000000000000000000000000000000000000002877 187.0
DYD1_k127_4175038_9 Cytochrome C oxidase, cbb3-type, subunit III - - - 0.000000000000000000000000000000000000000000000007411 181.0
DYD1_k127_4210364_0 Zinc-binding dehydrogenase K00121 - 1.1.1.1,1.1.1.284 7.046e-206 646.0
DYD1_k127_4210364_1 Catalyzes the tRNA-independent activation of glutamate in presence of ATP and the subsequent transfer of glutamate onto a tRNA(Asp). Glutamate is transferred on the 2-amino-5-(4,5- dihydroxy-2-cyclopenten-1-yl) moiety of the queuosine in the wobble position of the QUC anticodon K01894 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004043 383.0
DYD1_k127_4210364_2 acyl-CoA dehydrogenase - - - 0.0000000000000000000000000000000000000000000000000000000000000000002314 238.0
DYD1_k127_4210364_3 Patatin-like phospholipase K07001 - - 0.000000000000000000000000000000000000000000000000000000000000000003299 237.0
DYD1_k127_4210364_4 Tripartite tricarboxylate transporter family receptor - - - 0.000000000000000000000000000000000000000000000000000000001825 224.0
DYD1_k127_4210364_5 Rhodanese-like domain - - - 0.0000000000000000000000000000009513 131.0
DYD1_k127_4210364_6 Class II aldolase - - - 0.000000000000000000000000000001079 126.0
DYD1_k127_4210364_7 PFAM sodium calcium exchanger membrane region K07301 - - 0.00000000000000000000000002061 115.0
DYD1_k127_4210364_8 peptidase - - - 0.0000000009776 70.0
DYD1_k127_4215844_0 Catalyzes the reversible cyclization of carbamoyl aspartate to dihydroorotate K01465 - 3.5.2.3 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002213 506.0
DYD1_k127_4215844_1 Catalyzes the 2'-O-methylation of the ribose of cytidine 1402 (C1402) in 16S rRNA K07056 - 2.1.1.198 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001924 329.0
DYD1_k127_4215844_10 - - - - 0.00000000000000000001844 94.0
DYD1_k127_4215844_12 - - - - 0.00006841 50.0
DYD1_k127_4215844_2 Catalyzes the isomerization of sedoheptulose 7-phosphate in D-glycero-D-manno-heptose 7-phosphate K03271 - 5.3.1.28 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001411 308.0
DYD1_k127_4215844_3 LppC putative lipoprotein K07121 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000006172 262.0
DYD1_k127_4215844_4 Catalyzes the ADP transfer from ATP to D-glycero-beta-D- manno-heptose 1-phosphate, yielding ADP-D-glycero-beta-D-manno- heptose K21345 - 2.7.7.70 0.0000000000000000000000000000000000000000000000000000000000000000000003723 244.0
DYD1_k127_4215844_5 PFAM transport-associated - - - 0.0000000000000000000000000000000000000000000000000000000000000002344 225.0
DYD1_k127_4215844_6 Catalyzes the phosphorylation of pantothenate (Pan), the first step in CoA biosynthesis K01947,K03525 - 2.7.1.33,6.3.4.15 0.0000000000000000000000000000000000000002953 155.0
DYD1_k127_4215844_7 - - - - 0.00000000000000000000000000001624 122.0
DYD1_k127_4215844_8 Belongs to the UPF0102 family K07460 - - 0.00000000000000000000000000003093 122.0
DYD1_k127_4215844_9 PFAM Sporulation domain protein - - - 0.00000000000000000000000000003889 130.0
DYD1_k127_4236578_0 Neisseria PilC beta-propeller domain K02674 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009144 490.0
DYD1_k127_4236578_1 Neisseria PilC beta-propeller domain K02674 - - 0.00000000000000000000000000000000000000000000000000000000000004678 231.0
DYD1_k127_4236655_0 Belongs to the pyruvate kinase family K00873 - 2.7.1.40 3.809e-204 645.0
DYD1_k127_4236655_1 Belongs to the phosphoglycerate kinase family K00927 GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0044424,GO:0044464 2.7.2.3 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002417 539.0
DYD1_k127_4236655_2 Fructose-bisphosphate aldolase class-I K01623 - 4.1.2.13 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001024 430.0
DYD1_k127_4236655_3 Belongs to the glyceraldehyde-3-phosphate dehydrogenase family K00134 GO:0000166,GO:0000226,GO:0001817,GO:0001819,GO:0001906,GO:0001907,GO:0002376,GO:0002791,GO:0002793,GO:0003674,GO:0003824,GO:0004365,GO:0004857,GO:0004866,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005634,GO:0005635,GO:0005737,GO:0005811,GO:0005829,GO:0005856,GO:0005886,GO:0005975,GO:0005996,GO:0006006,GO:0006007,GO:0006082,GO:0006090,GO:0006091,GO:0006094,GO:0006096,GO:0006139,GO:0006163,GO:0006164,GO:0006165,GO:0006417,GO:0006464,GO:0006725,GO:0006732,GO:0006733,GO:0006734,GO:0006735,GO:0006753,GO:0006754,GO:0006757,GO:0006793,GO:0006796,GO:0006807,GO:0006915,GO:0006950,GO:0006952,GO:0006955,GO:0006959,GO:0006996,GO:0007010,GO:0007017,GO:0008017,GO:0008092,GO:0008150,GO:0008152,GO:0008219,GO:0009056,GO:0009058,GO:0009108,GO:0009117,GO:0009123,GO:0009124,GO:0009126,GO:0009127,GO:0009132,GO:0009135,GO:0009141,GO:0009142,GO:0009144,GO:0009145,GO:0009150,GO:0009152,GO:0009156,GO:0009161,GO:0009165,GO:0009166,GO:0009167,GO:0009168,GO:0009179,GO:0009185,GO:0009199,GO:0009201,GO:0009205,GO:0009206,GO:0009259,GO:0009260,GO:0009435,GO:0009605,GO:0009607,GO:0009620,GO:0009889,GO:0009890,GO:0009892,GO:0009894,GO:0009987,GO:0010033,GO:0010466,GO:0010468,GO:0010506,GO:0010556,GO:0010558,GO:0010605,GO:0010608,GO:0010629,GO:0010941,GO:0010942,GO:0010951,GO:0012501,GO:0012505,GO:0015630,GO:0015631,GO:0016020,GO:0016043,GO:0016051,GO:0016052,GO:0016053,GO:0016241,GO:0016310,GO:0016491,GO:0016620,GO:0016740,GO:0016769,GO:0016903,GO:0017014,GO:0017144,GO:0017148,GO:0018119,GO:0018130,GO:0018193,GO:0018198,GO:0019222,GO:0019318,GO:0019319,GO:0019320,GO:0019359,GO:0019362,GO:0019363,GO:0019438,GO:0019439,GO:0019538,GO:0019637,GO:0019674,GO:0019693,GO:0019730,GO:0019752,GO:0019828,GO:0019904,GO:0030162,GO:0030234,GO:0030414,GO:0031090,GO:0031323,GO:0031324,GO:0031326,GO:0031327,GO:0031329,GO:0031341,GO:0031343,GO:0031640,GO:0031647,GO:0031965,GO:0031967,GO:0031975,GO:0032268,GO:0032269,GO:0032787,GO:0032879,GO:0032880,GO:0032991,GO:0034097,GO:0034248,GO:0034249,GO:0034341,GO:0034404,GO:0034641,GO:0034654,GO:0034655,GO:0035605,GO:0035606,GO:0035821,GO:0036094,GO:0036211,GO:0042221,GO:0042802,GO:0042866,GO:0042981,GO:0043065,GO:0043067,GO:0043068,GO:0043086,GO:0043170,GO:0043207,GO:0043226,GO:0043227,GO:0043228,GO:0043229,GO:0043231,GO:0043232,GO:0043412,GO:0043436,GO:0043891,GO:0043900,GO:0043902,GO:0043903,GO:0044003,GO:0044004,GO:0044068,GO:0044092,GO:0044237,GO:0044238,GO:0044248,GO:0044249,GO:0044260,GO:0044267,GO:0044270,GO:0044271,GO:0044281,GO:0044282,GO:0044283,GO:0044364,GO:0044403,GO:0044419,GO:0044422,GO:0044424,GO:0044428,GO:0044444,GO:0044446,GO:0044464,GO:0044531,GO:0044532,GO:0044533,GO:0045087,GO:0045861,GO:0046031,GO:0046034,GO:0046364,GO:0046365,GO:0046390,GO:0046394,GO:0046434,GO:0046483,GO:0046496,GO:0046700,GO:0046939,GO:0048037,GO:0048518,GO:0048519,GO:0048522,GO:0048523,GO:0050662,GO:0050707,GO:0050708,GO:0050714,GO:0050715,GO:0050789,GO:0050790,GO:0050794,GO:0050821,GO:0050832,GO:0050896,GO:0051046,GO:0051047,GO:0051049,GO:0051050,GO:0051171,GO:0051172,GO:0051186,GO:0051188,GO:0051222,GO:0051223,GO:0051239,GO:0051240,GO:0051246,GO:0051248,GO:0051287,GO:0051336,GO:0051346,GO:0051402,GO:0051701,GO:0051702,GO:0051704,GO:0051707,GO:0051709,GO:0051712,GO:0051716,GO:0051817,GO:0051818,GO:0051851,GO:0051852,GO:0051873,GO:0051883,GO:0052040,GO:0052042,GO:0052248,GO:0052330,GO:0052433,GO:0052501,GO:0052547,GO:0052548,GO:0055086,GO:0055114,GO:0060255,GO:0061134,GO:0061135,GO:0061615,GO:0061620,GO:0061621,GO:0061718,GO:0061844,GO:0065007,GO:0065008,GO:0065009,GO:0070201,GO:0070887,GO:0070997,GO:0071310,GO:0071345,GO:0071346,GO:0071704,GO:0071840,GO:0071944,GO:0072330,GO:0072521,GO:0072522,GO:0072524,GO:0072525,GO:0080090,GO:0090087,GO:0090407,GO:0097159,GO:0097452,GO:0097718,GO:0098542,GO:0098772,GO:0140096,GO:1901135,GO:1901137,GO:1901265,GO:1901292,GO:1901293,GO:1901360,GO:1901361,GO:1901362,GO:1901363,GO:1901564,GO:1901566,GO:1901575,GO:1901576,GO:1903530,GO:1903532,GO:1904951,GO:1990904,GO:2000112,GO:2000113 1.2.1.12 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006649 407.0
DYD1_k127_4236655_4 cobalamin synthesis protein - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003792 328.0
DYD1_k127_4236655_5 Amidohydrolase family - - - 0.00000000001179 71.0
DYD1_k127_4287980_0 hmm pf00005 K06147,K11085 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008105 555.0
DYD1_k127_4287980_1 Acetamidase/Formamidase family - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000002138 282.0
DYD1_k127_4287980_2 Catalytic LigB subunit of aromatic ring-opening dioxygenase K04101 - 1.13.11.8 0.000000000000000000000000000000000000000000000000000000000000000000000000001285 263.0
DYD1_k127_4287980_3 SOS response associated peptidase (SRAP) - - - 0.000000000000000000000000000000000000000000000000000000000000000000000001513 250.0
DYD1_k127_4287980_4 Peptidase M15 K03791 - - 0.000000000000000000000000000000000000000000000000000000000000000724 223.0
DYD1_k127_4287980_5 Cupin domain - - - 0.000000000000000000000000000000000000000000000000000009579 194.0
DYD1_k127_4287980_6 Carboxymuconolactone decarboxylase family - - - 0.00000000000000000000000000000000000000001004 157.0
DYD1_k127_4287980_7 Protein conserved in bacteria - - - 0.00000000000000000000000000001263 122.0
DYD1_k127_4287980_8 peptidase U32 K08303 GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0044424,GO:0044444,GO:0044464 - 0.0000000000000001869 85.0
DYD1_k127_4287980_9 DoxX K15977 - - 0.000000111 59.0
DYD1_k127_4408993_0 FAD linked oxidases, C-terminal domain K18930 - - 0.0 1289.0
DYD1_k127_4408993_1 Aminotransferase class-V K00830 - 2.6.1.44,2.6.1.45,2.6.1.51 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009999 617.0
DYD1_k127_4408993_10 Required for the formation of a threonylcarbamoyl group on adenosine at position 37 (t(6)A37) in tRNAs that read codons beginning with adenine - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001786 348.0
DYD1_k127_4408993_11 Tripartite tricarboxylate transporter family receptor - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000001521 279.0
DYD1_k127_4408993_12 Catalyzes the conversion of N5-carboxyaminoimidazole ribonucleotide (N5-CAIR) to 4-carboxy-5-aminoimidazole ribonucleotide (CAIR) K01588 - 5.4.99.18 0.000000000000000000000000000000000000000000000000000000000000000659 224.0
DYD1_k127_4408993_13 Acyl-CoA dehydrogenase, C-terminal domain - - - 0.0000000000000000000000000000000000000000000000000001223 186.0
DYD1_k127_4408993_14 Tripartite ATP-independent periplasmic transporters, DctQ component - - - 0.0000000000000000000000000000000000000000005382 164.0
DYD1_k127_4408993_15 HD domain K01139 - 2.7.6.5,3.1.7.2 0.000000000000000000000008925 111.0
DYD1_k127_4408993_2 TRAP-type C4-dicarboxylate transport system, large permease component - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002131 564.0
DYD1_k127_4408993_3 TIGRFAM TRAP dicarboxylate transporter, DctP subunit - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001045 466.0
DYD1_k127_4408993_4 Major facilitator superfamily - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001762 449.0
DYD1_k127_4408993_5 SAICAR synthetase K01923 GO:0003674,GO:0003824,GO:0004639,GO:0006139,GO:0006163,GO:0006164,GO:0006188,GO:0006189,GO:0006725,GO:0006753,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009117,GO:0009123,GO:0009124,GO:0009126,GO:0009127,GO:0009150,GO:0009152,GO:0009156,GO:0009161,GO:0009165,GO:0009167,GO:0009168,GO:0009259,GO:0009260,GO:0009987,GO:0016874,GO:0016879,GO:0016881,GO:0018130,GO:0019438,GO:0019637,GO:0019693,GO:0034641,GO:0034654,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0046040,GO:0046390,GO:0046483,GO:0055086,GO:0071704,GO:0072521,GO:0072522,GO:0090407,GO:1901135,GO:1901137,GO:1901293,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576 6.3.2.6 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002444 428.0
DYD1_k127_4408993_6 MmgE/PrpD family - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001279 428.0
DYD1_k127_4408993_7 Xylose isomerase-like TIM barrel - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002329 407.0
DYD1_k127_4408993_8 Acyl-CoA dehydrogenase, C-terminal domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001066 384.0
DYD1_k127_4408993_9 CoA-binding domain protein - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006586 370.0
DYD1_k127_4420405_0 Catalyzes the transfer of a methyl group from 5- methyltetrahydrofolate to homocysteine resulting in methionine formation K00549 - 2.1.1.14 6.057e-318 990.0
DYD1_k127_4420405_1 Catalyzes the NADPH-dependent reduction of ketopantoate into pantoic acid - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000148 522.0
DYD1_k127_4420405_10 Putative diguanylate phosphodiesterase - - - 0.0000000000000000000000000000000000000000000000000000000000000000009513 238.0
DYD1_k127_4420405_11 acetylesterase activity K01046 - 3.1.1.3 0.000000000000000000000000000000000000000000000000000000000000000152 235.0
DYD1_k127_4420405_12 Destroys radicals which are normally produced within the cells and which are toxic to biological systems K04565 - 1.15.1.1 0.00000000000000000000000000000000000000000000003355 175.0
DYD1_k127_4420405_13 PFAM alkyl hydroperoxide reductase Thiol specific antioxidant Mal allergen K03564 - 1.11.1.15 0.00000000000000000000000152 106.0
DYD1_k127_4420405_14 - - - - 0.000000000000000009174 87.0
DYD1_k127_4420405_15 TIGRFAM chromate transporter, chromate ion transporter (CHR) family K07240 - - 0.0000000000000002178 87.0
DYD1_k127_4420405_16 Chromate transporter K07240 - - 0.000000009692 64.0
DYD1_k127_4420405_17 cytochrome C peroxidase - - - 0.0000000646 63.0
DYD1_k127_4420405_18 Redoxin K03386 GO:0003674,GO:0003824,GO:0004601,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006950,GO:0008150,GO:0008152,GO:0009605,GO:0009607,GO:0009636,GO:0009987,GO:0016209,GO:0016491,GO:0016684,GO:0020012,GO:0030682,GO:0042221,GO:0043207,GO:0044403,GO:0044413,GO:0044415,GO:0044419,GO:0044424,GO:0044444,GO:0044464,GO:0050896,GO:0051409,GO:0051701,GO:0051704,GO:0051707,GO:0051716,GO:0051805,GO:0051807,GO:0051832,GO:0051834,GO:0051920,GO:0052060,GO:0052173,GO:0052200,GO:0052376,GO:0052551,GO:0052564,GO:0052565,GO:0052572,GO:0055114,GO:0070887,GO:0075136,GO:0097237,GO:0098754,GO:0098869,GO:1990748 1.11.1.15 0.000002321 50.0
DYD1_k127_4420405_2 Poorly processive, error-prone DNA polymerase involved in untargeted mutagenesis. Copies undamaged DNA at stalled replication forks, which arise in vivo from mismatched or misaligned primer ends. These misaligned primers can be extended by PolIV. Exhibits no 3'-5' exonuclease (proofreading) activity. May be involved in translesional synthesis, in conjunction with the beta clamp from PolIII K02346,K03502 GO:0000731,GO:0003674,GO:0003824,GO:0003887,GO:0005575,GO:0005622,GO:0005623,GO:0005634,GO:0005654,GO:0005737,GO:0006139,GO:0006259,GO:0006281,GO:0006301,GO:0006725,GO:0006807,GO:0006950,GO:0006974,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0016604,GO:0016607,GO:0016740,GO:0016772,GO:0016779,GO:0018130,GO:0019438,GO:0019985,GO:0031974,GO:0031981,GO:0032991,GO:0033554,GO:0034061,GO:0034641,GO:0034645,GO:0034654,GO:0035770,GO:0036464,GO:0042276,GO:0043170,GO:0043226,GO:0043227,GO:0043228,GO:0043229,GO:0043231,GO:0043232,GO:0043233,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044271,GO:0044422,GO:0044424,GO:0044428,GO:0044444,GO:0044446,GO:0044451,GO:0044464,GO:0046483,GO:0050896,GO:0051716,GO:0070013,GO:0071704,GO:0071897,GO:0090304,GO:0140097,GO:1901360,GO:1901362,GO:1901576,GO:1990904 2.7.7.7 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005313 499.0
DYD1_k127_4420405_3 Transcriptional regulator K03576 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003845 428.0
DYD1_k127_4420405_4 Amidohydrolase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003142 408.0
DYD1_k127_4420405_5 Possible lysine decarboxylase K06966 - 3.2.2.10 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001425 389.0
DYD1_k127_4420405_6 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008228 391.0
DYD1_k127_4420405_7 EamA-like transporter family - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000003038 280.0
DYD1_k127_4420405_8 Glutathione S-transferase, N-terminal domain K00799 - 2.5.1.18 0.0000000000000000000000000000000000000000000000000000000000000000000000000000007531 271.0
DYD1_k127_4420405_9 Domain of Unknown Function (DUF1080) - - - 0.000000000000000000000000000000000000000000000000000000000000000000002724 241.0
DYD1_k127_4426079_0 Critical role in recombination and DNA repair. Helps process Holliday junction intermediates to mature products by catalyzing branch migration. Has a DNA unwinding activity characteristic of a DNA helicase with a 3'- to 5'- polarity. Unwinds branched duplex DNA (Y-DNA) K03655 - 3.6.4.12 2.7e-284 891.0
DYD1_k127_4426079_1 Belongs to the IlvD Edd family - - - 8.949e-275 854.0
DYD1_k127_4426079_10 Histidine kinase K10125 - 2.7.13.3 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008009 468.0
DYD1_k127_4426079_11 D-alanyl-D-alanine carboxypeptidase K07259 - 3.4.16.4 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001119 451.0
DYD1_k127_4426079_12 Transfers the N-acyl diglyceride group on what will become the N-terminal cysteine of membrane lipoproteins K13292 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002253 385.0
DYD1_k127_4426079_13 Catalyzes the prenylation of para-hydroxybenzoate (PHB) with an all-trans polyprenyl group. Mediates the second step in the final reaction sequence of ubiquinone-8 (UQ-8) biosynthesis, which is the condensation of the polyisoprenoid side chain with PHB, generating the first membrane-bound Q intermediate 3- octaprenyl-4-hydroxybenzoate K03179 - 2.5.1.39 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001609 355.0
DYD1_k127_4426079_14 lactoylglutathione lyase activity - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000457 348.0
DYD1_k127_4426079_15 Acyl-CoA dehydrogenase, N-terminal domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002927 342.0
DYD1_k127_4426079_16 PFAM Endoribonuclease L-PSP K09022 - 3.5.99.10 0.000000000000000000000000000000000000000000000003473 176.0
DYD1_k127_4426079_17 Removes the pyruvyl group from chorismate, with concomitant aromatization of the ring, to provide 4- hydroxybenzoate (4HB) for the ubiquinone pathway K03181 - 4.1.3.40 0.00000000000000000000000000000000000000000298 161.0
DYD1_k127_4426079_18 SapC - - - 0.0000000000000000000000000000000000000009322 160.0
DYD1_k127_4426079_19 MmgE PrpD family protein - - - 0.00000000000000000000000000000000000000522 160.0
DYD1_k127_4426079_2 Protein of unknown function, DUF255 K06888 - - 1.796e-270 851.0
DYD1_k127_4426079_3 Catalyzes the decarboxylation of 3-octaprenyl-4-hydroxy benzoate to 2-octaprenylphenol, an intermediate step in ubiquinone biosynthesis K03182 - 4.1.1.98 2.424e-260 808.0
DYD1_k127_4426079_4 Bifunctional purine biosynthesis protein PurH K00602 - 2.1.2.3,3.5.4.10 2.246e-236 740.0
DYD1_k127_4426079_5 Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family K00833 - 2.6.1.62 3.988e-201 635.0
DYD1_k127_4426079_6 PFAM Serine threonine-protein kinase-like domain K12132 - 2.7.11.1 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007553 618.0
DYD1_k127_4426079_7 Belongs to the GARS family K01945 - 6.3.4.13 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001933 609.0
DYD1_k127_4426079_8 Acyl-CoA dehydrogenase, middle domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002702 494.0
DYD1_k127_4426079_9 Involved in the heme biosynthesis. Catalyzes the aerobic oxidative decarboxylation of propionate groups of rings A and B of coproporphyrinogen-III to yield the vinyl groups in protoporphyrinogen-IX K00228 GO:0003674,GO:0005488,GO:0005515,GO:0042802,GO:0042803,GO:0046983 1.3.3.3 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001228 469.0
DYD1_k127_4460161_0 Aldo/keto reductase family - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000001528 300.0
DYD1_k127_4460161_1 Tripartite tricarboxylate transporter family receptor - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000002322 282.0
DYD1_k127_4460161_2 Tripartite tricarboxylate transporter family receptor - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000005768 263.0
DYD1_k127_4460161_3 Amidohydrolase K07046 - - 0.000000000000000000000000000000000000000000000000000000000000000000003135 245.0
DYD1_k127_4460161_4 Tripartite tricarboxylate transporter TctA family K07793 - - 0.00000000000001036 75.0
DYD1_k127_4460161_5 Tripartite tricarboxylate transporter TctB family - - - 0.0000009965 56.0
DYD1_k127_4479316_0 Peptide chain release factor 1 directs the termination of translation in response to the peptide chain termination codons UAG and UAA K02835 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001034 550.0
DYD1_k127_4479316_1 Methylates the class 1 translation termination release factors RF1 PrfA and RF2 PrfB on the glutamine residue of the universally conserved GGQ motif K02493 GO:0003674,GO:0003824,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006464,GO:0006479,GO:0006807,GO:0008150,GO:0008152,GO:0008168,GO:0008170,GO:0008213,GO:0008276,GO:0008757,GO:0009987,GO:0016740,GO:0016741,GO:0018364,GO:0019538,GO:0032259,GO:0036009,GO:0036211,GO:0043170,GO:0043412,GO:0043414,GO:0044237,GO:0044238,GO:0044260,GO:0044267,GO:0044424,GO:0044444,GO:0044464,GO:0071704,GO:0140096,GO:1901564 2.1.1.297 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000002206 282.0
DYD1_k127_4479316_2 - - - - 0.00000000000000000000000000000000000000000000000000971 190.0
DYD1_k127_4479316_3 Catalyzes the NADPH-dependent reduction of glutamyl- tRNA(Glu) to glutamate 1-semialdehyde (GSA) K02492 - 1.2.1.70 0.00000000000000000000000000000000000000000000002109 173.0
DYD1_k127_4479316_4 Belongs to the glutaredoxin family. Monothiol subfamily K07390 - - 0.00000000000000000000000000000000000000000007418 165.0
DYD1_k127_4479316_5 membrane transporter protein K07090 - - 0.00000000000000000000000000000000000001229 155.0
DYD1_k127_4479316_6 RDD family - - - 0.00000000000000000000000000000000006146 139.0
DYD1_k127_4506131_0 Aldehyde oxidase and xanthine dehydrogenase, a b hammerhead K03520 - 1.2.5.3 5.214e-290 910.0
DYD1_k127_4506131_1 Pfam Sulfatase K01133 - 3.1.6.6 1.949e-221 696.0
DYD1_k127_4506131_10 PFAM conserved - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000002232 282.0
DYD1_k127_4506131_11 [2Fe-2S] binding domain K03518 - 1.2.5.3 0.0000000000000000000000000000000000000000000000000000000000000001032 226.0
DYD1_k127_4506131_12 Protein of unknown function DUF126 K09128 - - 0.000000000000000000000000000000000000000000000000000000000000002142 221.0
DYD1_k127_4506131_13 Bacterial regulatory proteins, gntR family - - - 0.000000000000000000000000000000000000000000000000000000000000006989 225.0
DYD1_k127_4506131_2 Protein of unknown function (DUF521) K09123 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001038 525.0
DYD1_k127_4506131_3 Hydrolyzes cAMP to 5'-AMP. Plays an important regulatory role in modulating the intracellular concentration of cAMP, thereby influencing cAMP-dependent processes - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001846 401.0
DYD1_k127_4506131_4 Tripartite tricarboxylate transporter family receptor - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002464 328.0
DYD1_k127_4506131_5 COG2084 3-hydroxyisobutyrate dehydrogenase and related beta-hydroxyacid dehydrogenases - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006154 316.0
DYD1_k127_4506131_6 Aldolase/RraA - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000001977 299.0
DYD1_k127_4506131_7 Tripartite tricarboxylate transporter family receptor - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000005217 295.0
DYD1_k127_4506131_8 Dehydrogenase K03519 - 1.2.5.3 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000421 286.0
DYD1_k127_4506131_9 Tripartite tricarboxylate transporter family receptor - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000001629 282.0
DYD1_k127_4519955_0 Putative sugar-binding N-terminal domain K21948 - 2.7.1.217 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005124 520.0
DYD1_k127_4519955_1 COG0526, thiol-disulfide isomerase and thioredoxins - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001137 487.0
DYD1_k127_4519955_10 PFAM conserved - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000007232 291.0
DYD1_k127_4519955_11 Tripartite tricarboxylate transporter family receptor - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000002196 262.0
DYD1_k127_4519955_12 Asp Glu hydantoin racemase - - - 0.000000000000000000000000000000000000000000000000000002015 200.0
DYD1_k127_4519955_13 - - - - 0.0000000000000000000000000001649 117.0
DYD1_k127_4519955_14 - - - - 0.00000000000000000004951 91.0
DYD1_k127_4519955_2 Belongs to the mandelate racemase muconate lactonizing enzyme family K22209 - 4.2.1.81 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007908 420.0
DYD1_k127_4519955_3 Putative cyclase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003707 411.0
DYD1_k127_4519955_4 MmgE/PrpD family - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007739 411.0
DYD1_k127_4519955_5 Amidohydrolase K03392 - 4.1.1.45 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000809 345.0
DYD1_k127_4519955_6 Tripartite tricarboxylate transporter family receptor - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000004318 309.0
DYD1_k127_4519955_7 protein conserved in bacteria - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000005601 307.0
DYD1_k127_4519955_8 PFAM conserved - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000003285 297.0
DYD1_k127_4519955_9 Class II Aldolase and Adducin N-terminal domain K22130 - 4.1.1.104 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000001763 287.0
DYD1_k127_4522853_0 Adenylate cyclase - - - 6.801e-203 647.0
DYD1_k127_4522853_1 - - - - 0.000000000000000000000000000000000000000000007834 168.0
DYD1_k127_4522853_2 oxidoreductase K19181 - 1.1.1.292 0.0000000000000000000000000001551 121.0
DYD1_k127_4522853_3 TOBE domain K10112 - - 0.000000000006256 69.0
DYD1_k127_4541408_0 Major facilitator Superfamily - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001408 525.0
DYD1_k127_4541408_1 metabolite transporter - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003222 428.0
DYD1_k127_4541408_10 Iron/manganese superoxide dismutases, C-terminal domain K04564 - 1.15.1.1 0.00000000000000004771 82.0
DYD1_k127_4541408_11 Histidine kinase - - - 0.00000001284 57.0
DYD1_k127_4541408_2 MacB-like periplasmic core domain K02004 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002485 389.0
DYD1_k127_4541408_3 PFAM NADH ubiquinone oxidoreductase 20 kDa subunit - - - 0.0000000000000000000000000000000000000000000000000000000000000000000002167 240.0
DYD1_k127_4541408_4 abc transporter atp-binding protein K02003 - - 0.00000000000000000000000000000000000000000000000000000000000002717 228.0
DYD1_k127_4541408_5 Mandelate racemase / muconate lactonizing enzyme, C-terminal domain - - - 0.0000000000000000000000000000000000000000000000000000000000009331 225.0
DYD1_k127_4541408_6 helix_turn_helix, Lux Regulon K14979 - - 0.000000000000000000000000000000000000000000000000000000000001974 218.0
DYD1_k127_4541408_7 Protein of unknown function (DUF3299) K09950 - - 0.0000000000000000000000000000000000000006238 160.0
DYD1_k127_4541408_9 response regulator - - - 0.000000000000000004605 89.0
DYD1_k127_4624238_0 - - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003245 460.0
DYD1_k127_4624238_1 Alpha/beta hydrolase family - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003935 447.0
DYD1_k127_4624238_2 acyl-CoA transferases carnitine dehydratase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001389 448.0
DYD1_k127_4624238_3 NAD(P)H-dependent FMN reductase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000397 263.0
DYD1_k127_4624238_4 helix_turn_helix, Lux Regulon - - - 0.0000000000000000000000000000000000000000000000000000000000000003366 223.0
DYD1_k127_4624238_5 Domain of Unknown Function (DUF1080) - - - 0.00000000000000000000000000000000000000000000000005916 184.0
DYD1_k127_4624238_6 Glycine-zipper domain - - - 0.000000000000000000000000000000000000000000000001265 180.0
DYD1_k127_4624238_7 Transcriptional regulator - - - 0.0000000000000000000000002116 107.0
DYD1_k127_4624238_8 peptidase S15 K06978 - - 0.0000008277 62.0
DYD1_k127_4685249_0 Bacterial extracellular solute-binding proteins, family 5 Middle K02035 - - 1.145e-252 792.0
DYD1_k127_4685249_1 Oligopeptide/dipeptide transporter, C-terminal region - - - 2.433e-225 726.0
DYD1_k127_4685249_2 Amidase K01457 - 3.5.1.54 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001253 584.0
DYD1_k127_4685249_3 Binding-protein-dependent transport system inner membrane component - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000632 463.0
DYD1_k127_4685249_4 Binding-protein-dependent transport systems inner membrane component K02034 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001392 431.0
DYD1_k127_4685249_5 GntR family - - - 0.00000000000000000000000000000000000000000000000000000000000000000001778 248.0
DYD1_k127_4685249_6 Serine hydrolase K07002 - - 0.000000000000000000000000000000000000000000000000622 180.0
DYD1_k127_4685249_7 HIUase/Transthyretin family - - - 0.00000000000000000000000000000000007299 136.0
DYD1_k127_4685249_8 OsmC-like protein - - - 0.000000006378 60.0
DYD1_k127_4685249_9 OsmC-like protein - - - 0.0006339 46.0
DYD1_k127_4696894_0 Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain K03520 - 1.2.5.3 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003849 525.0
DYD1_k127_4696894_1 COG0626 Cystathionine beta-lyases cystathionine gamma-synthases K01760 - 4.4.1.8 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002309 456.0
DYD1_k127_4696894_2 phosphogluconate dehydrogenase (decarboxylating) activity K00020 - 1.1.1.31 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004606 367.0
DYD1_k127_4746215_0 TIGRFAM phenylalanyl-tRNA synthetase, beta subunit K01890 - 6.1.1.20 2.307e-276 870.0
DYD1_k127_4746215_1 PFAM transglutaminase domain protein K22452 - 2.3.2.13 5.68e-198 636.0
DYD1_k127_4746215_10 COG0739 Membrane proteins related to metalloendopeptidases K06194 - - 0.000000000000000000000000000000000000000000000000000000000000000000000007444 254.0
DYD1_k127_4746215_11 This protein is one of the two subunits of integration host factor, a specific DNA-binding protein that functions in genetic recombination as well as in transcriptional and translational control K04764 - - 0.000000000000000000000000000000000000000000000000001187 186.0
DYD1_k127_4746215_12 Binds directly to 23S ribosomal RNA and is necessary for the in vitro assembly process of the 50S ribosomal subunit. It is not involved in the protein synthesizing functions of that subunit K02887 - - 0.000000000000000000000000000000000000000000000000001586 184.0
DYD1_k127_4746215_13 PFAM regulatory protein, MerR - - - 0.000000000000000000000000000000000000000000000002091 175.0
DYD1_k127_4746215_14 protein possibly involved in utilization of glycolate and propanediol - - - 0.0000000000000000000000000000000000006803 145.0
DYD1_k127_4746215_15 Belongs to the bacterial ribosomal protein bL35 family K02916 - - 0.000000000000000007915 85.0
DYD1_k127_4746215_16 hydroperoxide reductase activity K07486 - - 0.000000000205 67.0
DYD1_k127_4746215_17 Antioxidant protein with alkyl hydroperoxidase activity. Required for the reduction of the AhpC active site cysteine residues and for the regeneration of the AhpC enzyme activity - - - 0.00001405 51.0
DYD1_k127_4746215_2 GGDEF domain containing protein - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001022 594.0
DYD1_k127_4746215_3 Belongs to the class-II aminoacyl-tRNA synthetase family. Phe-tRNA synthetase alpha subunit type 1 subfamily K01889 - 6.1.1.20 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004594 475.0
DYD1_k127_4746215_4 PFAM ATPase associated with various cellular activities AAA_3 K03924 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001478 413.0
DYD1_k127_4746215_5 Nucleotidase that shows phosphatase activity on nucleoside 5'-monophosphates K03787 - 3.1.3.5 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001306 370.0
DYD1_k127_4746215_6 conserved protein (some members contain a von Willebrand factor type A (vWA) domain) - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001325 314.0
DYD1_k127_4746215_7 Carbon-nitrogen hydrolase K11206 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000002052 299.0
DYD1_k127_4746215_8 Catalyzes the methyl esterification of L-isoaspartyl residues in peptides and proteins that result from spontaneous decomposition of normal L-aspartyl and L-asparaginyl residues. It plays a role in the repair and or degradation of damaged proteins K00573 - 2.1.1.77 0.0000000000000000000000000000000000000000000000000000000000000000000000000002825 265.0
DYD1_k127_4746215_9 IF-3 binds to the 30S ribosomal subunit and shifts the equilibrum between 70S ribosomes and their 50S and 30S subunits in favor of the free subunits, thus enhancing the availability of 30S subunits on which protein synthesis initiation begins K02520 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000002801 252.0
DYD1_k127_4776583_0 Bacterial protein of unknown function (DUF853) K06915 - - 5.506e-219 689.0
DYD1_k127_4776583_1 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006142 535.0
DYD1_k127_4776583_10 Psort location CytoplasmicMembrane, score 10.00 K03458 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000225 279.0
DYD1_k127_4776583_11 COG0683 ABC-type branched-chain amino acid transport systems, periplasmic component K01999 - - 0.00000000000000000000000000000000000000000000000000000000000000000002937 250.0
DYD1_k127_4776583_12 Benzoate membrane transport protein K05782 - - 0.0000000000000000000000000000000000000000000000000000000000006444 227.0
DYD1_k127_4776583_13 Psort location CytoplasmicMembrane, score 10.00 K03458 - - 0.000000000000000000000000000000000000000000000000000000000149 215.0
DYD1_k127_4776583_14 cheY-homologous receiver domain K11443 - - 0.000000000000000000000000000000000000000000000000009246 185.0
DYD1_k127_4776583_15 Cysteine-rich motif following a subset of SET domains K07117 - - 0.00000000000000000000000000000000000000000000000005092 184.0
DYD1_k127_4776583_16 ABC transporter substrate binding protein K01989 - - 0.0000000000000000000000000000000000000000000005313 183.0
DYD1_k127_4776583_17 Response regulator receiver - - - 0.0000000000000000000000000000000000000003109 152.0
DYD1_k127_4776583_18 Histidine kinase-like ATPase domain - - - 0.000000000000000000000000001805 124.0
DYD1_k127_4776583_19 STAS domain K04749 - - 0.000000000000000000002044 98.0
DYD1_k127_4776583_2 Psort location CytoplasmicMembrane, score 10.00 K03458 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008883 436.0
DYD1_k127_4776583_20 Flavodoxin domain K00230 - 1.3.5.3 0.0000000000000000004868 94.0
DYD1_k127_4776583_3 Psort location CytoplasmicMembrane, score 10.00 K03458 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005482 420.0
DYD1_k127_4776583_4 transcriptional regulatory protein - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007547 386.0
DYD1_k127_4776583_5 Part of the tripartite ATP-independent periplasmic (TRAP) transport system - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001763 369.0
DYD1_k127_4776583_6 Protein of unknown function (DUF1003) - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002027 332.0
DYD1_k127_4776583_7 Sigma factor PP2C-like phosphatases K07315 - 3.1.3.3 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002305 312.0
DYD1_k127_4776583_8 COG0683 ABC-type branched-chain amino acid transport systems, periplasmic component K01999 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000209 299.0
DYD1_k127_4776583_9 CO dehydrogenase flavoprotein C-terminal domain K03519 - 1.2.5.3 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000002815 285.0
DYD1_k127_4796936_0 Component of the ubiquinol-cytochrome c reductase complex (complex III or cytochrome b-c1 complex), which is a respiratory chain that generates an electrochemical potential coupled to ATP synthesis K00412 - - 9.152e-208 655.0
DYD1_k127_4796936_1 ATPases associated with a variety of cellular activities - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003371 403.0
DYD1_k127_4796936_10 Component of the ubiquinol-cytochrome c reductase complex (complex III or cytochrome b-c1 complex), which is a respiratory chain that generates an electrochemical potential coupled to ATP synthesis K00411 - 1.10.2.2 0.0000000000000000000000000000000000000000000000000000000000000000007582 230.0
DYD1_k127_4796936_11 stringent starvation protein B K03600 - - 0.000000000000000000000000000000000000001806 152.0
DYD1_k127_4796936_12 Domain of unknown function (DUF4340) - - - 0.000000000000000005116 98.0
DYD1_k127_4796936_2 D-isomer specific 2-hydroxyacid dehydrogenase K00058 - 1.1.1.399,1.1.1.95 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002499 380.0
DYD1_k127_4796936_3 ABC-type uncharacterized transport system - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001444 387.0
DYD1_k127_4796936_4 Glutathione S-transferase, N-terminal domain K03599 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009542 353.0
DYD1_k127_4796936_5 Belongs to the TPP enzyme family - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005229 344.0
DYD1_k127_4796936_6 major facilitator superfamily - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000676 331.0
DYD1_k127_4796936_7 Cytochrome C1 K00413 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000006123 300.0
DYD1_k127_4796936_8 COG1277 ABC-type transport system involved in multi-copper enzyme maturation, permease component K01992 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000001403 293.0
DYD1_k127_4796936_9 major facilitator superfamily - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000001445 275.0
DYD1_k127_4850914_0 Molecular chaperone. Has ATPase activity K04079 - - 4.515e-308 955.0
DYD1_k127_4850914_1 Domain present in phytochromes and cGMP-specific phosphodiesterases. - - - 8.513e-214 703.0
DYD1_k127_4850914_10 Tripartite tricarboxylate transporter family receptor - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000002203 301.0
DYD1_k127_4850914_11 Catalyzes the irreversible transfer of a propylamine group from the amino donor S-adenosylmethioninamine (decarboxy- AdoMet) to putrescine (1,4-diaminobutane) to yield spermidine - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000001628 275.0
DYD1_k127_4850914_12 Tripartite tricarboxylate transporter family receptor - - - 0.000000000000000000000000000000000000000000000000000000000000000000000002911 255.0
DYD1_k127_4850914_13 Major Facilitator Superfamily - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000203 258.0
DYD1_k127_4850914_14 SMART cyclic nucleotide-binding K10914 - - 0.00000000000000000000000000000000000000000000000000000000000001042 223.0
DYD1_k127_4850914_15 Histone methylation protein DOT1 - - - 0.000000000000000000000000000000000000000000000000000000000003352 234.0
DYD1_k127_4850914_16 Histone methylation protein DOT1 - - - 0.0000000000000000000000000000000000000000000000000000000002518 214.0
DYD1_k127_4850914_17 Histone methylation protein DOT1 - - - 0.00000000000000000000000000000000000000000000000000000001196 208.0
DYD1_k127_4850914_18 Histone methylation protein DOT1 - - - 0.0000000000000000000000000000000000000000000000000000007888 203.0
DYD1_k127_4850914_19 Histone methylation protein DOT1 - - - 0.000000000000000000000000000000000000000000000000002712 201.0
DYD1_k127_4850914_2 Tripartite tricarboxylate transporter TctA family K07793 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003053 545.0
DYD1_k127_4850914_20 - - - - 0.0000000000000000007464 88.0
DYD1_k127_4850914_21 - - - - 0.00000000000000000236 89.0
DYD1_k127_4850914_22 Tripartite tricarboxylate transporter TctB family - - - 0.00000000338 64.0
DYD1_k127_4850914_3 COG0526, thiol-disulfide isomerase and thioredoxins - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001887 486.0
DYD1_k127_4850914_4 PFAM Amino acid permease K03294 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001494 482.0
DYD1_k127_4850914_5 Beta-lactamase superfamily domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003268 351.0
DYD1_k127_4850914_6 Tripartite tricarboxylate transporter family receptor - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009707 359.0
DYD1_k127_4850914_7 2-keto-4-pentenoate hydratase 2-oxohepta-3-ene-1,7-dioic acid hydratase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001341 342.0
DYD1_k127_4850914_8 Histidine kinase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003433 342.0
DYD1_k127_4850914_9 Fumarylacetoacetate (FAA) hydrolase family - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003423 316.0
DYD1_k127_4973408_0 Tripartite tricarboxylate transporter TctA family K07793 - - 1.599e-237 743.0
DYD1_k127_4973408_1 Aconitase family (aconitate hydratase) - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002189 611.0
DYD1_k127_4973408_10 Catalyzes the isomerization between 2-isopropylmalate and 3-isopropylmalate, via the formation of 2-isopropylmaleate - - - 0.0000000000000000000000000000000000000000000000000000000348 202.0
DYD1_k127_4973408_11 Cyclin-dependent kinase inhibitor 3 (CDKN3) - - - 0.0000000000000000000000000000000000000000000002031 172.0
DYD1_k127_4973408_12 Tripartite tricarboxylate transporter TctB family K07794 - - 0.000000000000000000000000000000000000004011 151.0
DYD1_k127_4973408_15 BolA-like protein K05527 - - 0.0000000000000000000000004644 111.0
DYD1_k127_4973408_16 ParE toxin of type II toxin-antitoxin system, parDE - - - 0.00000000000003007 74.0
DYD1_k127_4973408_17 Putative addiction module component - - - 0.0000000000003462 72.0
DYD1_k127_4973408_2 glycolate oxidase subunit GlcD - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004172 548.0
DYD1_k127_4973408_3 Belongs to the TPP enzyme family - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007252 490.0
DYD1_k127_4973408_4 Ketopantoate reductase PanE/ApbA C terminal - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007297 432.0
DYD1_k127_4973408_5 Catalyzes the oxidation of 3-carboxy-2-hydroxy-4- methylpentanoate (3-isopropylmalate) to 3-carboxy-4-methyl-2- oxopentanoate. The product decarboxylates to 4-methyl-2 oxopentanoate K00030 - 1.1.1.41 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003007 367.0
DYD1_k127_4973408_6 diguanylate cyclase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000009457 293.0
DYD1_k127_4973408_7 probably involved in intracellular septation K06190 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000001324 257.0
DYD1_k127_4973408_8 Peptidyl-prolyl cis-trans isomerase K03769 - 5.2.1.8 0.00000000000000000000000000000000000000000000000000000000000000000002264 239.0
DYD1_k127_4973408_9 SelR domain K07305,K12267 - 1.8.4.11,1.8.4.12 0.0000000000000000000000000000000000000000000000000000000000006779 213.0
DYD1_k127_4988057_0 Phosphoenolpyruvate carboxykinase C-terminal P-loop domain K01596,K01610 GO:0005575,GO:0005576,GO:0005618,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005886,GO:0006873,GO:0006875,GO:0006879,GO:0006950,GO:0007154,GO:0008150,GO:0009267,GO:0009605,GO:0009607,GO:0009987,GO:0009991,GO:0010106,GO:0016020,GO:0019725,GO:0030003,GO:0030312,GO:0031667,GO:0031668,GO:0031669,GO:0033554,GO:0042592,GO:0042594,GO:0043207,GO:0044403,GO:0044419,GO:0044424,GO:0044444,GO:0044464,GO:0046916,GO:0048878,GO:0050801,GO:0050896,GO:0051701,GO:0051704,GO:0051707,GO:0051716,GO:0052173,GO:0052200,GO:0052564,GO:0052572,GO:0055065,GO:0055072,GO:0055076,GO:0055080,GO:0055082,GO:0065007,GO:0065008,GO:0071496,GO:0071944,GO:0075136,GO:0098771 4.1.1.32,4.1.1.49 5.19e-288 904.0
DYD1_k127_4988057_1 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006706 436.0
DYD1_k127_4988057_2 Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family K00015 - 1.1.1.26 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003682 374.0
DYD1_k127_4988057_3 Major Facilitator Superfamily - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002516 373.0
DYD1_k127_4988057_4 Oxidoreductase family, NAD-binding Rossmann fold - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000109 334.0
DYD1_k127_4988057_5 Catalyzes the phosphorylation of pyruvate to phosphoenolpyruvate K01007 - 2.7.9.2 0.000000000000000000000000000000000000000000000000000001509 208.0
DYD1_k127_4988057_6 COG0006 Xaa-Pro aminopeptidase - - - 0.00000000000000000000000001901 113.0
DYD1_k127_4988057_7 Antioxidant protein with alkyl hydroperoxidase activity. Required for the reduction of the AhpC active site cysteine residues and for the regeneration of the AhpC enzyme activity - - - 0.000000001183 64.0
DYD1_k127_4988057_8 Antioxidant protein with alkyl hydroperoxidase activity. Required for the reduction of the AhpC active site cysteine residues and for the regeneration of the AhpC enzyme activity - - - 0.0001721 50.0
DYD1_k127_4988927_0 general L-amino acid-binding periplasmic protein AapJ K09969 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001819 506.0
DYD1_k127_4988927_1 COG0765 ABC-type amino acid transport system, permease component K09971 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000035 492.0
DYD1_k127_4988927_2 acid transport system permease K09970 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000039 456.0
DYD1_k127_4988927_3 Sulphur transport K07112 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003783 401.0
DYD1_k127_4988927_4 acid transport K09972 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007995 386.0
DYD1_k127_4988927_5 Oxidoreductase family, NAD-binding Rossmann fold - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007616 344.0
DYD1_k127_4988927_6 Queuosine biosynthesis protein QueC K06920 - 6.3.4.20 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002579 336.0
DYD1_k127_4988927_7 TolA binding protein trimerisation - - - 0.0000000000000000000000000000000000000000000000001272 188.0
DYD1_k127_4988927_8 Belongs to the ompA family K03640 - - 0.000000000000000000000000000007971 119.0
DYD1_k127_5009969_0 heavy metal translocating P-type ATPase - - - 0.0 1092.0
DYD1_k127_5009969_1 Homospermidine synthase K00808 - 2.5.1.44 1.799e-209 661.0
DYD1_k127_5009969_10 NlpB/DapX lipoprotein K07287 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001493 428.0
DYD1_k127_5009969_11 amine dehydrogenase activity - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004422 411.0
DYD1_k127_5009969_12 Succinyl-CoA synthetase functions in the citric acid cycle (TCA), coupling the hydrolysis of succinyl-CoA to the synthesis of either ATP or GTP and thus represents the only step of substrate-level phosphorylation in the TCA. The alpha subunit of the enzyme binds the substrates coenzyme A and phosphate, while succinate binding and nucleotide specificity is provided by the beta subunit K01902 - 6.2.1.5 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005668 403.0
DYD1_k127_5009969_13 cellulose binding - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002907 358.0
DYD1_k127_5009969_14 Multicopper oxidase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001717 362.0
DYD1_k127_5009969_15 A domain family that is part of the cupin metalloenzyme superfamily. - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001426 342.0
DYD1_k127_5009969_16 Fatty acid hydroxylase superfamily - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002568 325.0
DYD1_k127_5009969_17 Beta-lactamase superfamily domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008758 312.0
DYD1_k127_5009969_18 Glycosyl transferases group 1 - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000005422 298.0
DYD1_k127_5009969_19 Cytochrome C biogenesis protein transmembrane region K06196 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000001344 293.0
DYD1_k127_5009969_2 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain K00520 - 1.16.1.1 4.873e-206 657.0
DYD1_k127_5009969_20 Protein-L-isoaspartate(D-aspartate) O-methyltransferase (PCMT) K07755 - 2.1.1.137 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000007186 298.0
DYD1_k127_5009969_21 transcriptional regulator, ArsR family - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000002796 276.0
DYD1_k127_5009969_22 Cytochrome C biogenesis protein transmembrane region - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000002352 259.0
DYD1_k127_5009969_23 Protein-L-isoaspartate(D-aspartate) O-methyltransferase (PCMT) - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000007902 268.0
DYD1_k127_5009969_24 PFAM Methyltransferase type 12 - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000009494 256.0
DYD1_k127_5009969_25 PFAM cation efflux protein - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000001555 254.0
DYD1_k127_5009969_26 Redoxin K02199 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000008594 250.0
DYD1_k127_5009969_27 methyltransferase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000001649 250.0
DYD1_k127_5009969_28 metal-dependent enzyme of the double-stranded beta helix superfamily - - - 0.000000000000000000000000000000000000000000000000000000000000000002717 230.0
DYD1_k127_5009969_29 cytochrome K08738 - - 0.000000000000000000000000000000000000000000000000000000000000000006522 231.0
DYD1_k127_5009969_3 COG1012 NAD-dependent aldehyde dehydrogenases K04072,K13922 - 1.1.1.1,1.2.1.10,1.2.1.87 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001455 588.0
DYD1_k127_5009969_30 polyketide cyclase - - - 0.0000000000000000000000000000000000000000000000000000000000000005514 222.0
DYD1_k127_5009969_31 Required for disulfide bond formation in some periplasmic proteins. Acts by transferring its disulfide bond to other proteins and is reduced in the process - - - 0.00000000000000000000000000000000000000000000000000000000000000242 227.0
DYD1_k127_5009969_32 Methyltransferase type 11 - - - 0.00000000000000000000000000000000000000000000000000000000000006195 218.0
DYD1_k127_5009969_33 Participates in the translocation of lipoproteins from the inner membrane to the outer membrane. Only forms a complex with a lipoprotein if the residue after the N-terminal Cys is not an aspartate (The Asp acts as a targeting signal to indicate that the lipoprotein should stay in the inner membrane) - - - 0.0000000000000000000000000000000000000000000000000000004839 200.0
DYD1_k127_5009969_34 Sigma-70, region 4 - - - 0.000000000000000000000000000000000000000000000000000002416 200.0
DYD1_k127_5009969_35 Involved in biogenesis of respiratory and photosynthetic systems K07152 - - 0.00000000000000000000000000000000000000000000000000003511 196.0
DYD1_k127_5009969_36 Thioredoxin-like - - - 0.00000000000000000000000000000000000000000000000001776 186.0
DYD1_k127_5009969_37 Antibiotic biosynthesis monooxygenase - - - 0.000000000000000000000000000000000000000000000006435 174.0
DYD1_k127_5009969_38 MerR, DNA binding K08365,K19591 - - 0.00000000000000000000000000000000000000000008038 164.0
DYD1_k127_5009969_39 UPF0060 membrane protein K09771 - - 0.000000000000000000000000000000000000000009607 157.0
DYD1_k127_5009969_4 Chromate transporter - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002529 509.0
DYD1_k127_5009969_40 - - - - 0.000000000000000000000000000000000000001938 166.0
DYD1_k127_5009969_41 PFAM blue (type 1) copper domain protein - - - 0.000000000000000000000000000000000000132 148.0
DYD1_k127_5009969_42 - - - - 0.000000000000000000000000000000000004171 143.0
DYD1_k127_5009969_43 PFAM Mercuric transport protein MerT K08363 - - 0.0000000000000000000000000000000000283 138.0
DYD1_k127_5009969_44 Transcriptional regulator - - - 0.0000000000000000000000000000000005046 139.0
DYD1_k127_5009969_45 Required to facilitate the formation of correct disulfide bonds in some periplasmic proteins and for the assembly of the periplasmic c-type cytochromes. Acts by transferring electrons from cytoplasmic thioredoxin to the periplasm. This transfer involves a cascade of disulfide bond formation and reduction steps K04084 - 1.8.1.8 0.000000000000000000000000000000001627 136.0
DYD1_k127_5009969_46 Trypsin-like peptidase domain - - - 0.0000000000000000000000000000007364 131.0
DYD1_k127_5009969_47 Transcriptional regulator K08365 - - 0.0000000000000000000000000000008391 126.0
DYD1_k127_5009969_48 - - - - 0.000000000000000000000000000007891 124.0
DYD1_k127_5009969_49 - - - - 0.00000000000000000000000000003198 125.0
DYD1_k127_5009969_5 Major facilitator Superfamily - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003527 500.0
DYD1_k127_5009969_51 Mercury scavenger that specifically binds to one mercury ion and which passes it to the mercuric reductase (MerA) via the MerT protein K08364 - - 0.000000000000000006412 84.0
DYD1_k127_5009969_52 Heavy-metal-associated domain K07213 - - 0.000000000000006663 83.0
DYD1_k127_5009969_53 AntiSigma factor - GO:0000988,GO:0000989,GO:0003674,GO:0005488,GO:0006950,GO:0006979,GO:0008150,GO:0008270,GO:0009266,GO:0009408,GO:0009593,GO:0009628,GO:0009889,GO:0010556,GO:0016989,GO:0019219,GO:0019222,GO:0031323,GO:0031326,GO:0032502,GO:0042221,GO:0043167,GO:0043169,GO:0043934,GO:0046872,GO:0046914,GO:0050789,GO:0050794,GO:0050896,GO:0051171,GO:0051252,GO:0051606,GO:0051775,GO:0051776,GO:0060255,GO:0065007,GO:0080090,GO:0140110,GO:1903506,GO:2001141 - 0.0000000000003038 72.0
DYD1_k127_5009969_55 - - - - 0.00001672 54.0
DYD1_k127_5009969_56 PFAM DsrE family protein K07235 - - 0.000043 53.0
DYD1_k127_5009969_6 Methyl-transferase K18912 - 1.14.99.50 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005104 474.0
DYD1_k127_5009969_7 Belongs to the succinate malate CoA ligase beta subunit family K01903 - 6.2.1.5 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008111 461.0
DYD1_k127_5009969_8 Catalyzes the condensation of (S)-aspartate-beta- semialdehyde (S)-ASA and pyruvate to 4-hydroxy- tetrahydrodipicolinate (HTPA) K01714 - 4.3.3.7 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001072 452.0
DYD1_k127_5009969_9 PFAM multicopper oxidase type K04753,K08100,K14588 - 1.3.3.5 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000238 444.0
DYD1_k127_5015478_0 TIGRFAM Acetolactate synthase, large subunit, biosynthetic K01652 - 2.2.1.6 3.275e-315 970.0
DYD1_k127_5015478_1 Catalyzes the condensation of the acetyl group of acetyl-CoA with 3-methyl-2-oxobutanoate (2-oxoisovalerate) to form 3-carboxy-3-hydroxy-4-methylpentanoate (2-isopropylmalate) K01649 - 2.3.3.13 3.025e-247 772.0
DYD1_k127_5015478_2 Involved in the biosynthesis of branched-chain amino acids (BCAA). Catalyzes an alkyl-migration followed by a ketol- acid reduction of (S)-2-acetolactate (S2AL) to yield (R)-2,3- dihydroxy-isovalerate. In the isomerase reaction, S2AL is rearranged via a Mg-dependent methyl migration to produce 3- hydroxy-3-methyl-2-ketobutyrate (HMKB). In the reductase reaction, this 2-ketoacid undergoes a metal-dependent reduction by NADPH to yield (R)-2,3-dihydroxy-isovalerate K00053 - 1.1.1.86 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003144 542.0
DYD1_k127_5015478_3 Belongs to the CDP-alcohol phosphatidyltransferase class-I family K17103 - 2.7.8.8 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004496 340.0
DYD1_k127_5015478_4 Catalyzes the formation of phosphatidylethanolamine (PtdEtn) from phosphatidylserine (PtdSer) K01613 - 4.1.1.65 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002974 302.0
DYD1_k127_5015478_5 TIGRFAM Acetolactate synthase, small subunit K01653 GO:0003674,GO:0003824,GO:0003984,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005948,GO:0006082,GO:0006520,GO:0006549,GO:0006573,GO:0006807,GO:0008150,GO:0008152,GO:0008652,GO:0009058,GO:0009081,GO:0009082,GO:0009097,GO:0009099,GO:0009987,GO:0016053,GO:0016740,GO:0016744,GO:0019752,GO:0032991,GO:0043436,GO:0044237,GO:0044238,GO:0044249,GO:0044281,GO:0044283,GO:0044424,GO:0044444,GO:0044464,GO:0046394,GO:0071704,GO:1901564,GO:1901566,GO:1901576,GO:1901605,GO:1901607,GO:1902494,GO:1990234 2.2.1.6 0.0000000000000000000000000000000000000000000000000000000000000000000000000001221 273.0
DYD1_k127_5026559_0 Fad dependent oxidoreductase K00273 - 1.4.3.3 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007276 450.0
DYD1_k127_5026559_1 PFAM Alcohol dehydrogenase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001384 451.0
DYD1_k127_5026559_10 Protein of unknown function (DUF3025) - - - 0.00000000000000000000000000000000000000000000000000000000000004507 224.0
DYD1_k127_5026559_11 rejects L-amino acids rather than detecting D-amino acids in the active site. By recycling D-aminoacyl-tRNA to D-amino acids and free tRNA molecules, this enzyme counteracts the toxicity associated with the formation of D-aminoacyl-tRNA entities in vivo and helps enforce protein L-homochirality K07560 - - 0.0000000000000000000000000000000000000000000000000000000007365 204.0
DYD1_k127_5026559_12 N-terminal half of MaoC dehydratase - - - 0.000000000000000000000000000000000000000001191 163.0
DYD1_k127_5026559_13 Amidohydrolase K01686 - 4.2.1.8 0.000000000000000000000007793 105.0
DYD1_k127_5026559_14 Cupin domain - - - 0.000000000000000009686 92.0
DYD1_k127_5026559_15 Fumarylacetoacetate (FAA) hydrolase family K02509 - - 0.00000000000003149 83.0
DYD1_k127_5026559_16 Acyl-CoA dehydrogenase, C-terminal domain - - - 0.00000000004777 63.0
DYD1_k127_5026559_2 Belongs to the peptidase M48B family K03799 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006017 438.0
DYD1_k127_5026559_3 Acyl-CoA synthetases (AMP-forming) AMP-acid ligases II - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007847 419.0
DYD1_k127_5026559_4 Polysaccharide deacetylase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001043 374.0
DYD1_k127_5026559_5 acyl-CoA transferase carnitine dehydratase K18702 - 2.8.3.19 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002687 360.0
DYD1_k127_5026559_6 diguanylate cyclase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001651 353.0
DYD1_k127_5026559_7 Metal dependent phosphohydrolases with conserved 'HD' motif. - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000003122 287.0
DYD1_k127_5026559_8 Protein involved in outer membrane biogenesis - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000003473 308.0
DYD1_k127_5026559_9 PFAM 6-phosphogluconate dehydrogenase NAD-binding K00020 - 1.1.1.31 0.000000000000000000000000000000000000000000000000000000000000000000000000003439 264.0
DYD1_k127_5028313_0 Is required not only for elongation of protein synthesis but also for the initiation of all mRNA translation through initiator tRNA(fMet) aminoacylation K01874 - 6.1.1.10 7.256e-306 950.0
DYD1_k127_5028313_1 Belongs to the Orn Lys Arg decarboxylase class-II family K01581 - 4.1.1.17 2.459e-199 626.0
DYD1_k127_5028313_2 Binds and transfers iron-sulfur (Fe-S) clusters to target apoproteins. Can hydrolyze ATP K03593 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001599 559.0
DYD1_k127_5028313_3 Mandelate racemase / muconate lactonizing enzyme, C-terminal domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001337 467.0
DYD1_k127_5028313_4 PFAM Serine threonine-protein kinase-like domain K12132 - 2.7.11.1 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001764 388.0
DYD1_k127_5028313_5 Belongs to the dCTP deaminase family K01494 - 3.5.4.13 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005648 342.0
DYD1_k127_5028313_6 adenylyl cyclase class-3 4 guanylyl cyclase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000006087 299.0
DYD1_k127_5028313_7 dienelactone hydrolase - - - 0.0000000000000000000000000000000000000000000000000000000001398 215.0
DYD1_k127_5028313_8 Type IV pilus biogenesis stability protein PilW - - - 0.00000000000000000000000000000003967 129.0
DYD1_k127_5028313_9 Sel1-like repeats. K07126 - - 0.0000000000000000009377 89.0
DYD1_k127_5052689_0 SMART alpha amylase catalytic sub domain K05343 - 3.2.1.1,5.4.99.16 0.0 1396.0
DYD1_k127_5052689_1 Catalyzes the formation of the alpha-1,6-glucosidic linkages in glycogen by scission of a 1,4-alpha-linked oligosaccharide from growing alpha-1,4-glucan chains and the subsequent attachment of the oligosaccharide to the alpha-1,6 position K00700 - 2.4.1.18 3.168e-315 977.0
DYD1_k127_5052689_10 Cysteine-rich domain K18928 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005099 365.0
DYD1_k127_5052689_11 MmgE/PrpD family - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001954 347.0
DYD1_k127_5052689_12 Transcriptional regulator - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000003359 298.0
DYD1_k127_5052689_13 Domain present in PSD-95, Dlg, and ZO-1/2. - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000442 289.0
DYD1_k127_5052689_14 Removes the phosphate from trehalose 6-phosphate to produce free trehalose K01087 - 3.1.3.12 0.0000000000000000000000000000000000000000000000000000000000000000000000009036 256.0
DYD1_k127_5052689_15 EamA-like transporter family - - - 0.000000000000000000000000000000000000000000000000000000000000000000192 239.0
DYD1_k127_5052689_16 LUD domain K00782 - - 0.0000000000000000000000000000000000000000000000000000000000000000003053 235.0
DYD1_k127_5052689_17 Necessary for efficient RNA polymerase transcription elongation past template-encoded arresting sites. The arresting sites in DNA have the property of trapping a certain fraction of elongating RNA polymerases that pass through, resulting in locked ternary complexes. Cleavage of the nascent transcript by cleavage factors such as GreA or GreB allows the resumption of elongation from the new 3'terminus. GreB releases sequences of up to 9 nucleotides in length K04760 - - 0.00000000000000000000000000000000000000000000000000000000000000001748 230.0
DYD1_k127_5052689_18 Sulfatase K01130 - 3.1.6.1 0.000000000000000000000000000000000000000000000000000000000003172 212.0
DYD1_k127_5052689_19 Protein of unknown function (DUF3567) - - - 0.0000000004093 63.0
DYD1_k127_5052689_2 Maltosyltransferase that uses maltose 1-phosphate (M1P) as the sugar donor to elongate linear or branched alpha-(1- 4)- glucans. Is involved in a branched alpha-glucan biosynthetic pathway from trehalose, together with TreS, Mak and GlgB K16147 - 2.4.99.16 1.357e-300 938.0
DYD1_k127_5052689_20 COG0697 Permeases of the drug metabolite transporter (DMT) superfamily - - - 0.000000006336 59.0
DYD1_k127_5052689_3 Aldehyde dehydrogenase family K00140 - 1.2.1.18,1.2.1.27 2.691e-222 704.0
DYD1_k127_5052689_4 Belongs to the lyase 1 family. Adenylosuccinate lyase subfamily K01756 - 4.3.2.2 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004443 585.0
DYD1_k127_5052689_5 4Fe-4S ferredoxin, iron-sulfur binding K18929 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001455 588.0
DYD1_k127_5052689_6 Multicopper oxidase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001054 542.0
DYD1_k127_5052689_7 GIY-YIG type nucleases (URI domain) K02342 - 2.7.7.7 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009493 519.0
DYD1_k127_5052689_8 Mandelate racemase / muconate lactonizing enzyme, C-terminal domain K01781 - 5.1.2.2 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005644 407.0
DYD1_k127_5052689_9 Catalyzes the NADPH-dependent reduction of ketopantoate into pantoic acid - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003827 374.0
DYD1_k127_5056654_0 Belongs to the class-I pyridine nucleotide-disulfide oxidoreductase family K00383 - 1.8.1.7 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000344 575.0
DYD1_k127_5056654_1 Diguanylate cyclase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003856 329.0
DYD1_k127_5056654_2 major facilitator superfamily - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000003578 264.0
DYD1_k127_5056654_3 Pfam:PNPOx_C K00275 - 1.4.3.5 0.000000000000000000000000000000000000000000000000000000000000000000000216 245.0
DYD1_k127_5056654_4 Glycine zipper - - - 0.0000000000000000000000000000000000000000000000000000000006402 211.0
DYD1_k127_5056654_5 Drug metabolite transporter (DMT) superfamily - - - 0.00000000000000000000000000000000000000000000000000000002043 212.0
DYD1_k127_5056654_6 NnrU protein - - - 0.0000000000000000000000000000000000000000000000000000001347 202.0
DYD1_k127_5056654_7 SWI complex, BAF60b domains - - - 0.00000000000000000000000000000003075 128.0
DYD1_k127_5056654_8 Protein conserved in bacteria - - - 0.0000000000000000002261 96.0
DYD1_k127_5159422_0 Belongs to the thiolase family K00626 - 2.3.1.9 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008989 582.0
DYD1_k127_5159422_1 Serine-pyruvate aminotransferase archaeal aspartate aminotransferase K00830,K00839 - 2.6.1.112,2.6.1.44,2.6.1.45,2.6.1.51 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006447 559.0
DYD1_k127_5159422_2 Polysaccharide deacetylase K01452 - 3.5.1.41 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001192 472.0
DYD1_k127_5159422_3 Peptidase dimerisation domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000445 383.0
DYD1_k127_5159422_4 Redox regulated molecular chaperone. Protects both thermally unfolding and oxidatively damaged proteins from irreversible aggregation. Plays an important role in the bacterial defense system toward oxidative stress K04083 - - 0.0000000000001179 71.0
DYD1_k127_5288795_0 The UvrABC repair system catalyzes the recognition and processing of DNA lesions. UvrA is an ATPase and a DNA-binding protein. A damage recognition complex composed of 2 UvrA and 2 UvrB subunits scans DNA for abnormalities. When the presence of a lesion has been verified by UvrB, the UvrA molecules dissociate K03701 - - 0.0 2522.0
DYD1_k127_5288795_1 Catalyzes the oxidation of glucose 6-phosphate to 6- phosphogluconolactone K00036 GO:0005575,GO:0005623,GO:0005886,GO:0016020,GO:0044464,GO:0071944 1.1.1.363,1.1.1.49 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000517 529.0
DYD1_k127_5288795_2 Belongs to the pirin family K06911 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006837 362.0
DYD1_k127_5288795_3 Glucosamine-6-phosphate isomerases/6-phosphogluconolactonase K00851,K01057 GO:0003674,GO:0003824,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006081,GO:0006098,GO:0006139,GO:0006725,GO:0006732,GO:0006733,GO:0006739,GO:0006753,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0009051,GO:0009117,GO:0009987,GO:0016787,GO:0016788,GO:0017057,GO:0019362,GO:0019637,GO:0019682,GO:0019693,GO:0034641,GO:0044237,GO:0044238,GO:0044281,GO:0044424,GO:0044464,GO:0046483,GO:0046496,GO:0051156,GO:0051186,GO:0052689,GO:0055086,GO:0071704,GO:0072524,GO:1901135,GO:1901360,GO:1901564 2.7.1.12,3.1.1.31 0.00000000000000000000000000000000000000000000000003078 190.0
DYD1_k127_5289525_0 Belongs to the CinA family - - - 5.604e-201 632.0
DYD1_k127_5289525_1 Thiamine pyrophosphate enzyme, central domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003944 574.0
DYD1_k127_5289525_2 CoA-transferase family III - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001319 437.0
DYD1_k127_5289525_3 Transmembrane secretion effector - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000247 432.0
DYD1_k127_5289525_4 Spermine/spermidine synthase domain K00797 - 2.5.1.16 0.0000000000000000000000000000000000000000000000000000000000000000000000000003832 286.0
DYD1_k127_5289525_5 COG2863 Cytochrome c553 - - - 0.00000000000000000000000000000000002438 141.0
DYD1_k127_5289525_6 - - - - 0.00000000257 61.0
DYD1_k127_5289525_7 PilZ domain - - - 0.00008506 49.0
DYD1_k127_5290689_0 Catalyzes the first step in hexosamine metabolism, converting fructose-6P into glucosamine-6P using glutamine as a nitrogen source K00820 - 2.6.1.16 1.128e-267 836.0
DYD1_k127_5290689_1 Produces ATP from ADP in the presence of a proton gradient across the membrane. The catalytic sites are hosted primarily by the beta subunits K02112 - 3.6.3.14 1.277e-265 822.0
DYD1_k127_5290689_10 Thiol disulfide interchange protein K03673 - - 0.00000000000000000000000000000000000000000000000000000000000001473 224.0
DYD1_k127_5290689_11 Produces ATP from ADP in the presence of a proton gradient across the membrane K02114 - - 0.000000000000000000000000000000000000000000000000002819 187.0
DYD1_k127_5290689_12 Sporulation related domain - - - 0.0000000000000000000000000000000000000000000001713 174.0
DYD1_k127_5290689_13 Thiol disulfide interchange protein K03673 - - 0.00000000000000000000000000000000000000000003844 169.0
DYD1_k127_5290689_14 glutamate synthase K00265 - 1.4.1.13,1.4.1.14 0.0000000009855 60.0
DYD1_k127_5290689_2 glutamate synthase K00266 - 1.4.1.13,1.4.1.14 1.149e-243 759.0
DYD1_k127_5290689_3 Arginyl-tRNA synthetase K01887 - 6.1.1.19 6.782e-238 750.0
DYD1_k127_5290689_4 Involved in the restart of stalled replication forks. Recognizes and binds the arrested nascent DNA chain at stalled replication forks. It can open the DNA duplex, via its helicase activity, and promote assembly of the primosome and loading of the major replicative helicase DnaB onto DNA K04066 - - 1.875e-225 721.0
DYD1_k127_5290689_5 Catalyzes the last two sequential reactions in the de novo biosynthetic pathway for UDP-N-acetylglucosamine (UDP- GlcNAc). The C-terminal domain catalyzes the transfer of acetyl group from acetyl coenzyme A to glucosamine-1-phosphate (GlcN-1-P) to produce N-acetylglucosamine-1-phosphate (GlcNAc-1-P), which is converted into UDP-GlcNAc by the transfer of uridine 5- monophosphate (from uridine 5-triphosphate), a reaction catalyzed by the N-terminal domain K04042 - 2.3.1.157,2.7.7.23 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002238 572.0
DYD1_k127_5290689_6 Belongs to the FAD-dependent glycerol-3-phosphate dehydrogenase family K00111 - 1.1.5.3 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001843 531.0
DYD1_k127_5290689_7 Catalyzes the decarboxylation of four acetate groups of uroporphyrinogen-III to yield coproporphyrinogen-III K01599 - 4.1.1.37 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003702 522.0
DYD1_k127_5290689_8 Produces ATP from ADP in the presence of a proton gradient across the membrane. The gamma chain is believed to be important in regulating ATPase activity and the flow of protons through the CF(0) complex K02115 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001288 401.0
DYD1_k127_5290689_9 KR domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002767 322.0
DYD1_k127_5314549_0 A protein kinase that phosphorylates Ser and Thr residues. Probably acts to suppress the effects of stress linked to accumulation of reactive oxygen species. Probably involved in the extracytoplasmic stress response - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001354 507.0
DYD1_k127_5314549_1 Esterase of the alpha-beta hydrolase superfamily K07001 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000546 366.0
DYD1_k127_5314549_11 SnoaL-like polyketide cyclase - - - 0.000000000000000000000001731 108.0
DYD1_k127_5314549_12 AraC-like ligand binding domain - - - 0.00000000000000000000006582 110.0
DYD1_k127_5314549_13 - - - - 0.000000000000000000004852 97.0
DYD1_k127_5314549_14 Belongs to the skp family K06142 - - 0.00000000000000001082 94.0
DYD1_k127_5314549_15 - - - - 0.00000000000006656 78.0
DYD1_k127_5314549_16 Cupin domain - - - 0.000000006679 63.0
DYD1_k127_5314549_2 Protein of unknown function (DUF1847) - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002579 338.0
DYD1_k127_5314549_3 protein conserved in bacteria - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000002309 282.0
DYD1_k127_5314549_4 Taurine catabolism dioxygenase TauD, TfdA family K03119 - 1.14.11.17 0.000000000000000000000000000000000000000000000000000000000000000000000000000000002439 280.0
DYD1_k127_5314549_5 PFAM amine oxidase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000007898 279.0
DYD1_k127_5314549_6 DinB family - - - 0.0000000000000000000000000000000000000000000000000000001044 205.0
DYD1_k127_5314549_7 Choline dehydrogenase and related flavoproteins K06151 - 1.1.99.3 0.000000000000000000000000000000000000008217 147.0
DYD1_k127_5314549_8 Thioesterase superfamily K07107 - - 0.000000000000000000000000000000001666 134.0
DYD1_k127_5314549_9 PFAM RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) - - - 0.0000000000000000000000000000006098 124.0
DYD1_k127_5386006_0 Cell wall formation. Adds enolpyruvyl to UDP-N- acetylglucosamine K00790 - 2.5.1.7 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008766 605.0
DYD1_k127_5386006_1 Catalyzes the sequential NAD-dependent oxidations of L- histidinol to L-histidinaldehyde and then to L-histidine K00013 - 1.1.1.23 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001096 606.0
DYD1_k127_5386006_10 imidazoleglycerol-phosphate dehydratase K01693 - 4.2.1.19 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005434 306.0
DYD1_k127_5386006_11 Component of the ubiquinol-cytochrome c reductase complex (complex III or cytochrome b-c1 complex), which is a respiratory chain that generates an electrochemical potential coupled to ATP synthesis K00411 - 1.10.2.2 0.00000000000000000000000000000000000000000000000000000000000000000000000000009284 263.0
DYD1_k127_5386006_12 ABC-type transport system involved in resistance to organic solvents, auxiliary component K07323 - - 0.00000000000000000000000000000000000000000000000000000000000001592 221.0
DYD1_k127_5386006_13 Catalyzes the hydrolysis of the adenine ring of phosphoribosyl-AMP K01496,K11755 - 3.5.4.19,3.6.1.31 0.00000000000000000000000000000000000000000000000000000000002141 207.0
DYD1_k127_5386006_14 MlaD protein K02067 - - 0.0000000000000000000000000000000000000000000000000000000001673 207.0
DYD1_k127_5386006_15 Psort location Cytoplasmic, score K01523 - 3.6.1.31 0.000000000000000000000000000000001634 138.0
DYD1_k127_5386006_16 Part of the twin-arginine translocation (Tat) system that transports large folded proteins containing a characteristic twin-arginine motif in their signal peptide across membranes. Together with TatC, TatB is part of a receptor directly interacting with Tat signal peptides. TatB may form an oligomeric binding site that transiently accommodates folded Tat precursor proteins before their translocation K03117 - - 0.0000000000000000000000000000003512 128.0
DYD1_k127_5386006_17 BolA-like protein - - - 0.0000000000000000000000000008373 121.0
DYD1_k127_5386006_18 Part of the twin-arginine translocation (Tat) system that transports large folded proteins containing a characteristic twin-arginine motif in their signal peptide across membranes. TatA could form the protein-conducting channel of the Tat system K03116 - - 0.000000000000000000001947 95.0
DYD1_k127_5386006_19 ABC transporter K02065 - - 0.000000000000000000008557 92.0
DYD1_k127_5386006_2 Component of the ubiquinol-cytochrome c reductase complex (complex III or cytochrome b-c1 complex), which is a respiratory chain that generates an electrochemical potential coupled to ATP synthesis K00412 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006569 486.0
DYD1_k127_5386006_20 transporter antisigma-factor antagonist STAS K07122 - - 0.0000000000000000003915 96.0
DYD1_k127_5386006_3 Belongs to the peptidase S1C family K04691,K04772 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002927 479.0
DYD1_k127_5386006_4 Belongs to the class-II pyridoxal-phosphate-dependent aminotransferase family. Histidinol-phosphate aminotransferase subfamily K00817 - 2.6.1.9 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003694 444.0
DYD1_k127_5386006_5 Permease MlaE K02066 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005751 424.0
DYD1_k127_5386006_6 IGPS catalyzes the conversion of PRFAR and glutamine to IGP, AICAR and glutamate. The HisF subunit catalyzes the cyclization activity that produces IGP and AICAR from PRFAR using the ammonia provided by the HisH subunit K02500 GO:0000105,GO:0000162,GO:0003674,GO:0003824,GO:0003949,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006082,GO:0006520,GO:0006547,GO:0006568,GO:0006576,GO:0006586,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0008652,GO:0009058,GO:0009072,GO:0009073,GO:0009308,GO:0009309,GO:0009987,GO:0016053,GO:0016853,GO:0016860,GO:0016861,GO:0018130,GO:0019438,GO:0019752,GO:0034641,GO:0042401,GO:0042430,GO:0042435,GO:0043436,GO:0044106,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0044283,GO:0044424,GO:0044464,GO:0046219,GO:0046394,GO:0046483,GO:0052803,GO:0071704,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576,GO:1901605,GO:1901607 - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007525 403.0
DYD1_k127_5386006_7 TIGRFAM Phosphoribosylformimino-5-aminoimidazole carboxamide ribotide isomerase K01814 GO:0000105,GO:0000162,GO:0003674,GO:0003824,GO:0003949,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006082,GO:0006520,GO:0006547,GO:0006568,GO:0006576,GO:0006586,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0008652,GO:0009058,GO:0009072,GO:0009073,GO:0009308,GO:0009309,GO:0009987,GO:0016053,GO:0016853,GO:0016860,GO:0016861,GO:0018130,GO:0019438,GO:0019752,GO:0034641,GO:0042401,GO:0042430,GO:0042435,GO:0043436,GO:0044106,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0044283,GO:0044424,GO:0044464,GO:0046219,GO:0046394,GO:0046483,GO:0052803,GO:0071704,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576,GO:1901605,GO:1901607 5.3.1.16 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000235 397.0
DYD1_k127_5386006_8 Part of the twin-arginine translocation (Tat) system that transports large folded proteins containing a characteristic twin-arginine motif in their signal peptide across membranes. Together with TatB, TatC is part of a receptor directly interacting with Tat signal peptides K03118 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007177 326.0
DYD1_k127_5386006_9 IGPS catalyzes the conversion of PRFAR and glutamine to IGP, AICAR and glutamate. The HisH subunit provides the glutamine amidotransferase activity that produces the ammonia necessary to HisF for the synthesis of IGP and AICAR K02501 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002014 308.0
DYD1_k127_5388551_0 Acyl-CoA dehydrogenase, C-terminal domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005764 541.0
DYD1_k127_5388551_1 Alpha beta hydrolase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002662 454.0
DYD1_k127_5388551_2 short-chain dehydrogenase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005678 317.0
DYD1_k127_5388551_3 Domain present in PSD-95, Dlg, and ZO-1/2. - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000011 296.0
DYD1_k127_5388551_4 Tripartite tricarboxylate transporter family receptor - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000002471 258.0
DYD1_k127_5388551_5 Belongs to the Fur family K09826 - - 0.0000000000000000000000000000000000000000000000000000000000005945 213.0
DYD1_k127_5388551_6 COG0520 Selenocysteine lyase - - - 0.00000000000000000000000000000000000000000000000000006619 202.0
DYD1_k127_5388551_7 Protein of unknown function (DUF3467) - - - 0.000000000000000000000000000004194 123.0
DYD1_k127_5388551_8 Neisseria PilC beta-propeller domain K02674 - - 0.00000000000000001401 93.0
DYD1_k127_5394953_0 Predicted membrane protein (DUF2238) - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000001593 274.0
DYD1_k127_5394953_1 Catalyzes the transfer of endogenously produced octanoic acid from octanoyl-acyl-carrier-protein onto the lipoyl domains of lipoate-dependent enzymes. Lipoyl-ACP can also act as a substrate although octanoyl-ACP is likely to be the physiological substrate K03801 - 2.3.1.181 0.000000000000000000000000000000000000000000000000000000000000000000000000000001692 269.0
DYD1_k127_5394953_2 Catalyzes the radical-mediated insertion of two sulfur atoms into the C-6 and C-8 positions of the octanoyl moiety bound to the lipoyl domains of lipoate-dependent enzymes, thereby converting the octanoylated domains into lipoylated derivatives K03644 - 2.8.1.8 0.0000000000000000000000000000000000000000000000008303 179.0
DYD1_k127_5394953_3 Protein of unknown function (DUF493) K09158 - - 0.0000000000000000000000000000002688 125.0
DYD1_k127_5394953_4 peroxiredoxin activity - - - 0.00000000000000000000003736 102.0
DYD1_k127_5394953_6 peroxiredoxin activity - - - 0.0001872 48.0
DYD1_k127_5438934_0 formate hydrogenlyase subunit 3 multisubunit Na H antiporter, MnhD subunit K05568,K12137 - - 4.384e-254 795.0
DYD1_k127_5438934_1 Proton-conducting membrane transporter - - - 3.217e-207 660.0
DYD1_k127_5438934_10 - - - - 0.00000000000000000008638 95.0
DYD1_k127_5438934_11 - - - - 0.000000000006214 75.0
DYD1_k127_5438934_12 - - - - 0.000000000008395 74.0
DYD1_k127_5438934_2 Proton-conducting membrane transporter - - - 2.845e-199 632.0
DYD1_k127_5438934_3 Part of the tripartite ATP-independent periplasmic (TRAP) transport system - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002764 458.0
DYD1_k127_5438934_4 Na H antiporter, MnhB K05566 - - 0.0000000000000000000000000000000000000000000000000000000000000001497 225.0
DYD1_k127_5438934_5 Na H antiporter, MnhB K05566 - - 0.00000000000000000000000000000000000000000000000000000000008688 209.0
DYD1_k127_5438934_6 COG1863 Multisubunit Na H antiporter MnhE subunit K05569 - - 0.0000000000000000000000000000000000000000000000000000002838 197.0
DYD1_k127_5438934_7 COG1006 Multisubunit Na H antiporter, MnhC subunit K05567 - - 0.00000000000000000000000000000000000000000001483 172.0
DYD1_k127_5438934_8 monovalent cation:proton antiporter activity K05571 - - 0.00000000000000000000000000000000001302 142.0
DYD1_k127_5438934_9 Multiple resistance and pH regulation protein F K05570 - - 0.000000000000000000000000000003225 122.0
DYD1_k127_5498379_0 Catalyzes the attachment of serine to tRNA(Ser). Is also able to aminoacylate tRNA(Sec) with serine, to form the misacylated tRNA L-seryl-tRNA(Sec), which will be further converted into selenocysteinyl-tRNA(Sec) K01875 - 6.1.1.11 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003555 595.0
DYD1_k127_5498379_1 ATP ADP translocase K03301 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005788 351.0
DYD1_k127_5498379_2 PFAM aldo keto reductase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002991 329.0
DYD1_k127_5500629_0 TIGRFAM ATP-dependent Clp protease ATP-binding subunit clpA K03694 - - 0.0 1203.0
DYD1_k127_5500629_1 sulfide dehydrogenase K05301 - 1.8.2.1 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004597 395.0
DYD1_k127_5500629_2 Belongs to the malate synthase family K01638 - 2.3.3.9 0.00000000000000000000000000000000000000000000000000000003571 199.0
DYD1_k127_5500629_3 Involved in the modulation of the specificity of the ClpAP-mediated ATP-dependent protein degradation K06891 - - 0.00000000000000000000000000000000000000000000558 165.0
DYD1_k127_5500629_4 Cold shock protein K03704 - - 0.00000000000000000000000000000000002921 136.0
DYD1_k127_5500629_5 Cytochrome c, class I - - - 0.00000000000000000000000000106 117.0
DYD1_k127_5537232_0 Tripartite tricarboxylate transporter TctA family K07793 - - 3.667e-213 673.0
DYD1_k127_5537232_1 Tripartite ATP-independent periplasmic transporter, DctM component - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004679 591.0
DYD1_k127_5537232_10 Fumarylacetoacetate (FAA) hydrolase family - - - 0.000000000000000000000000001328 112.0
DYD1_k127_5537232_11 Protein of unknown function (DUF3301) - - - 0.000000000000000000000008043 106.0
DYD1_k127_5537232_12 COGs COG1196 Chromosome segregation ATPase - - - 0.000000000000000123 91.0
DYD1_k127_5537232_13 DNA-damage-repair toleration protein DRT102 - GO:0005575,GO:0005622,GO:0005623,GO:0005634,GO:0005737,GO:0005829,GO:0006950,GO:0008150,GO:0009266,GO:0009409,GO:0009628,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0044424,GO:0044444,GO:0044464,GO:0050896 - 0.00003033 53.0
DYD1_k127_5537232_2 COG1638 TRAP-type C4-dicarboxylate transport system, periplasmic component K11688 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005096 350.0
DYD1_k127_5537232_3 Belongs to the TPP enzyme family - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002546 361.0
DYD1_k127_5537232_4 Tripartite tricarboxylate transporter family receptor - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003437 333.0
DYD1_k127_5537232_5 NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient K00338 - 1.6.5.3 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000006135 292.0
DYD1_k127_5537232_6 NADPH-dependent FMN reductase - - - 0.000000000000000000000000000000000000000000000000002751 183.0
DYD1_k127_5537232_7 Uncharacterized protein conserved in bacteria (DUF2237) K09966 - - 0.000000000000000000000000000000000000000000008458 165.0
DYD1_k127_5537232_8 Tripartite ATP-independent periplasmic transporters, DctQ component - - - 0.000000000000000000000000000000000002035 143.0
DYD1_k127_5537232_9 Tripartite tricarboxylate transporter TctB family K07794 - - 0.0000000000000000000000000000001678 130.0
DYD1_k127_5553000_0 Pyridoxal-phosphate dependent enzyme K01754 - 4.3.1.19 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001117 406.0
DYD1_k127_5553000_1 Protein of unknown function (DUF1499) - - - 0.0000000000000000000000000000000000000000000000000000000914 203.0
DYD1_k127_5553000_2 bacterial OsmY and nodulation domain - - - 0.0000000000000004423 86.0
DYD1_k127_5553000_3 Oxidoreductase family, NAD-binding Rossmann fold - - - 0.0000000004147 68.0
DYD1_k127_5554726_0 - - - - 1.765e-277 870.0
DYD1_k127_5554726_1 Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released. This sigma factor is the primary sigma factor during exponential growth K03086 - - 1.529e-276 869.0
DYD1_k127_5554726_10 PFAM conserved - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000008284 302.0
DYD1_k127_5554726_11 NADP oxidoreductase coenzyme F420-dependent K06988 - 1.5.1.40 0.00000000000000000000000000000000000000000000000000000000000000000000000000000003057 275.0
DYD1_k127_5554726_12 dehydratase - - - 0.0000000000000000000000000000000000000000000000000000000000000001423 224.0
DYD1_k127_5554726_13 ABC-type nitrate sulfonate bicarbonate transport system, permease component K02050 - - 0.0000000000000000000000000000000000000000000000000000000000000001436 231.0
DYD1_k127_5554726_14 Catalyzes the transfer of an acyl group from acyl- phosphate (acyl-PO(4)) to glycerol-3-phosphate (G3P) to form lysophosphatidic acid (LPA). This enzyme utilizes acyl-phosphate as fatty acyl donor, but not acyl-CoA or acyl-ACP K08591 - 2.3.1.15 0.000000000000000000000000000000000000000000000000000000000000006759 221.0
DYD1_k127_5554726_15 6-O-methylguanine DNA methyltransferase, DNA binding domain K00567 - 2.1.1.63 0.0000000000000000000000000000000000000000000000000001769 190.0
DYD1_k127_5554726_16 Yqey-like protein K09117 - - 0.0000000000000000000000000000000000000000000002666 172.0
DYD1_k127_5554726_17 Catalyzes the conversion of 7,8-dihydroneopterin to 6- hydroxymethyl-7,8-dihydropterin K01633 - 1.13.11.81,4.1.2.25,5.1.99.8 0.000000000000000000000000000000000000002841 149.0
DYD1_k127_5554726_18 Tripartite tricarboxylate transporter TctB family - - - 0.0000000000000000000000000000000000007902 147.0
DYD1_k127_5554726_19 Aldo/keto reductase family - - - 0.00000000000000000000000000000001651 132.0
DYD1_k127_5554726_2 Protein conserved in bacteria K07793 - - 5.408e-228 715.0
DYD1_k127_5554726_20 Belongs to the bacterial ribosomal protein bS21 family K02970 - - 0.0000000000000000000000000000009335 122.0
DYD1_k127_5554726_21 Mandelate racemase / muconate lactonizing enzyme, C-terminal domain K01684 - 4.2.1.6 0.00000000000000000000379 96.0
DYD1_k127_5554726_22 ABC-type nitrate sulfonate bicarbonate transport K02051 - - 0.000000000000001069 89.0
DYD1_k127_5554726_3 RNA polymerase that catalyzes the synthesis of short RNA molecules used as primers for DNA polymerase during DNA replication K02316 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002717 598.0
DYD1_k127_5554726_4 Mandelate racemase / muconate lactonizing enzyme, C-terminal domain K01781 - 5.1.2.2 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001066 574.0
DYD1_k127_5554726_5 Tripartite tricarboxylate transporter family receptor - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006214 457.0
DYD1_k127_5554726_6 Required for the formation of a threonylcarbamoyl group on adenosine at position 37 (t(6)A37) in tRNAs that read codons beginning with adenine. Is involved in the transfer of the threonylcarbamoyl moiety of threonylcarbamoyl-AMP (TC-AMP) to the N6 group of A37, together with TsaE and TsaB. TsaD likely plays a direct catalytic role in this reaction K01409 - 2.3.1.234 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000218 429.0
DYD1_k127_5554726_7 Tyrosine recombinase xerD K04763 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009776 420.0
DYD1_k127_5554726_8 Protein of unknown function (DUF3500) - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008793 359.0
DYD1_k127_5554726_9 Tetratricopeptide repeat - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001738 325.0
DYD1_k127_5567302_0 binding-protein-dependent transport systems inner membrane component K02011 - - 2.196e-255 798.0
DYD1_k127_5567302_1 PFAM Gamma-glutamyltranspeptidase K00681 - 2.3.2.2,3.4.19.13 1.063e-209 664.0
DYD1_k127_5567302_10 redox protein regulator of disulfide bond formation - - - 0.00000000000000000000000000000000000000000000000000000000000000000000011 241.0
DYD1_k127_5567302_11 protein conserved in bacteria - - - 0.0000000000000000000000000000000000000000000000000000000004072 208.0
DYD1_k127_5567302_12 Belongs to the DapA family K01714 - 4.3.3.7 0.000000000000000000000000000000000000000000000000000000001242 213.0
DYD1_k127_5567302_13 GAF domain - - - 0.0000000000000000000000000000000000000000000000000000004025 198.0
DYD1_k127_5567302_14 cyclic nucleotide-binding - - - 0.0000000000000000000000000000000000000001428 157.0
DYD1_k127_5567302_15 PFAM response regulator receiver K11443 - - 0.000000000000000000000000000000009957 130.0
DYD1_k127_5567302_17 Tripartite tricarboxylate transporter family receptor - - - 0.00000008421 55.0
DYD1_k127_5567302_2 Bacterial extracellular solute-binding protein - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008354 602.0
DYD1_k127_5567302_3 Belongs to the adenylyl cyclase class-4 guanylyl cyclase family K01768 - 4.6.1.1 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001009 501.0
DYD1_k127_5567302_4 FIST N domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002351 456.0
DYD1_k127_5567302_5 Part of the ABC transporter complex PotABCD involved in spermidine putrescine import. Responsible for energy coupling to the transport system K02010 - 3.6.3.30 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002912 428.0
DYD1_k127_5567302_6 Inactivates the type B streptogramin antibiotics by linearizing the lactone ring at the ester linkage, generating a free phenylglycine carboxylate and converting the threonyl moiety into 2-amino-butenoic acid K18235 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001768 401.0
DYD1_k127_5567302_7 (2R)-phospho-3-sulfolactate synthase (ComA) - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004809 336.0
DYD1_k127_5567302_8 Enoyl-CoA hydratase/isomerase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001272 314.0
DYD1_k127_5567302_9 Ornithine cyclodeaminase K01750 - 4.3.1.12 0.00000000000000000000000000000000000000000000000000000000000000000000000000001209 272.0
DYD1_k127_5585834_0 4-alpha-glucanotransferase K00705,K06044 - 2.4.1.25,5.4.99.15 0.0 1811.0
DYD1_k127_5585834_1 Belongs to the glycosyl hydrolase 13 family K01214 - 3.2.1.68 0.0 1122.0
DYD1_k127_5585834_2 TIGRFAM malto-oligosyltrehalose trehalohydrolase K01236 - 3.2.1.141 9.187e-246 781.0
DYD1_k127_5585834_3 PFAM Glycosyl transferase, family 20 K00697,K16055 - 2.4.1.15,2.4.1.347,3.1.3.12 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001667 588.0
DYD1_k127_5585834_4 ATP-dependent carboxylate-amine ligase which exhibits weak glutamate--cysteine ligase activity K06048 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009595 435.0
DYD1_k127_5585834_5 mechanosensitive ion channel K16052 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001886 327.0
DYD1_k127_5585834_6 Sodium/hydrogen exchanger family - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000005165 301.0
DYD1_k127_5585834_7 PFAM Conserved TM helix repeat-containing protein - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000001108 279.0
DYD1_k127_5585834_8 SMART alpha amylase catalytic sub domain K05343 - 3.2.1.1,5.4.99.16 0.000000000000000000000000000000000000000000000000000382 188.0
DYD1_k127_5585834_9 Peptidase C26 K01658,K07010 - 4.1.3.27 0.000000000000000000000000000000000008379 137.0
DYD1_k127_5653190_0 3'-5' exoribonuclease that releases 5'-nucleoside monophosphates and is involved in maturation of structured RNAs K12573 - - 2.12e-277 863.0
DYD1_k127_5653190_1 Large family of predicted nucleotide-binding domains K07175 - - 1.061e-244 762.0
DYD1_k127_5653190_10 Binds to the 23S rRNA K02939 - - 0.000000000000000000000000000000000000000000000000000000003569 202.0
DYD1_k127_5653190_11 Binds as a heterodimer with protein S6 to the central domain of the 16S rRNA, where it helps stabilize the platform of the 30S subunit K02963 - - 0.000000000000000000000000000000009568 130.0
DYD1_k127_5653190_12 Binds single-stranded DNA at the primosome assembly site (PAS) K02686 - - 0.000000000000000001368 95.0
DYD1_k127_5653190_2 it exhibits DNA-dependent ATPase activity and contains distinct active sites for ATP binding, DNA binding, and interaction with DnaC protein, primase, and other prepriming proteins K02314 - 3.6.4.12 3.001e-199 631.0
DYD1_k127_5653190_3 TIGRFAM filamentous haemagglutinin family outer membrane protein - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008156 473.0
DYD1_k127_5653190_4 Catalyzes the transfer of selenium from selenophosphate for conversion of 2-thiouridine to 2-selenouridine at the wobble position in tRNA K06917 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004407 424.0
DYD1_k127_5653190_5 Hemolysin activation secretion protein - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001049 426.0
DYD1_k127_5653190_6 Specifically methylates the ribose of guanosine 2251 in 23S rRNA K03218 - 2.1.1.185 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008155 331.0
DYD1_k127_5653190_7 polysaccharide deacetylase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000525 304.0
DYD1_k127_5653190_8 PFAM Alkyl hydroperoxide reductase K03564 GO:0003674,GO:0003824,GO:0004601,GO:0005575,GO:0005622,GO:0005623,GO:0005634,GO:0006950,GO:0006979,GO:0008150,GO:0008152,GO:0008379,GO:0009636,GO:0009987,GO:0016209,GO:0016491,GO:0016684,GO:0019725,GO:0033554,GO:0034599,GO:0042221,GO:0042592,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0044424,GO:0044464,GO:0045454,GO:0050789,GO:0050794,GO:0050896,GO:0051716,GO:0051920,GO:0055114,GO:0065007,GO:0065008,GO:0070887,GO:0097237,GO:0098754,GO:0098869,GO:1990748 1.11.1.15 0.0000000000000000000000000000000000000000000000000000000000000000000001326 241.0
DYD1_k127_5653190_9 Binds together with S18 to 16S ribosomal RNA K02990 - - 0.00000000000000000000000000000000000000000000000000000000000005559 215.0
DYD1_k127_5696949_0 PFAM Aminotransferase, class V K04487 - 2.8.1.7 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000537 466.0
DYD1_k127_5696949_1 Inositol monophosphatase K01092 - 3.1.3.25 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001127 390.0
DYD1_k127_5696949_2 Bacterial transferase hexapeptide (six repeats) K00640 - 2.3.1.30 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000347 346.0
DYD1_k127_5696949_3 Catalyzes the formation of 2'O-methylated cytidine (Cm32) or 2'O-methylated uridine (Um32) at position 32 in tRNA K02533 - - 0.000000000000000000000000000000000000000000000000000000000000000000000001098 252.0
DYD1_k127_5696949_4 Transcriptional regulator K13643 - - 0.0000000000000000000000000000000000000000000000000000000000000002354 224.0
DYD1_k127_5696949_5 alpha/beta hydrolase fold K01253 - 3.3.2.9 0.00000000000000000000000000000000000000000000000000000000241 222.0
DYD1_k127_5696949_6 - - - - 0.000000000000000000000000000000000000000000000000000646 200.0
DYD1_k127_5696949_7 Belongs to the UPF0255 family - - - 0.000000000000000000000000000000000000000000000000001059 198.0
DYD1_k127_5696949_8 Belongs to the HesB IscA family K13628 - - 0.0000000000000000000000000000000000000000003241 160.0
DYD1_k127_5696949_9 Anaphase promoting complex subunit 8 / Cdc23 K03355 - - 0.000008511 56.0
DYD1_k127_5812589_0 XdhC and CoxI family K07402 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004612 445.0
DYD1_k127_5812589_1 Malonyl-CoA decarboxylase K01578 - 4.1.1.9 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001043 431.0
DYD1_k127_5812589_2 Glutathione S-transferase K00799 - 2.5.1.18 0.0000000000000000000000000000000000000000000000000000000000003383 220.0
DYD1_k127_5812589_3 Catalyzes the conversion of N5-carboxyaminoimidazole ribonucleotide (N5-CAIR) to 4-carboxy-5-aminoimidazole ribonucleotide (CAIR) K01588 - 5.4.99.18 0.00000000000000000000000000000000000000000000000131 175.0
DYD1_k127_5812589_4 carbon monoxide dehydrogenase K09386 - - 0.000000000000000000000000000000000000000000000001723 178.0
DYD1_k127_5812589_5 ATP-grasp domain K01589 - 6.3.4.18 0.0000000000000000000000000000003863 133.0
DYD1_k127_5815386_0 Belongs to the UbiD family K03182,K16874 - 4.1.1.98 1.686e-265 830.0
DYD1_k127_5815386_1 Tripartite tricarboxylate transporter TctA family K07793 - - 4.058e-208 659.0
DYD1_k127_5815386_2 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007579 316.0
DYD1_k127_5815386_3 Flavin prenyltransferase that catalyzes the synthesis of the prenylated FMN cofactor (prenyl-FMN) for 4-hydroxy-3- polyprenylbenzoic acid decarboxylase UbiD. The prenyltransferase is metal-independent and links a dimethylallyl moiety from dimethylallyl monophosphate (DMAP) to the flavin N5 and C6 atoms of FMN K03186 - 2.5.1.129 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000791 271.0
DYD1_k127_5815386_4 Thioesterase superfamily - - - 0.00000000000000000000000000000000000000000000000000000002357 199.0
DYD1_k127_5815386_5 Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family K00058 - 1.1.1.399,1.1.1.95 0.000000000000000000000000000000000000000000000000396 178.0
DYD1_k127_5815386_6 Tripartite tricarboxylate transporter TctB family - - - 0.00000000000000000000000001432 115.0
DYD1_k127_5815386_7 PFAM AMP-dependent synthetase and ligase - - - 0.000000000000000000353 88.0
DYD1_k127_5849156_0 Belongs to the peptidase S41A family K03797 - 3.4.21.102 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001084 558.0
DYD1_k127_5849156_1 Belongs to the acetylglutamate kinase family. ArgB subfamily K00930 - 2.7.2.8 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006013 469.0
DYD1_k127_5849156_2 Belongs to the peptidase S11 family K01286,K07258 - 3.4.16.4 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002032 467.0
DYD1_k127_5849156_3 Aminotransferase class IV K00824 - 2.6.1.21 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000133 384.0
DYD1_k127_5849156_4 PFAM UBA THIF-type NAD FAD binding protein K21029 - 2.7.7.80 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007328 344.0
DYD1_k127_5849156_5 HAD-superfamily hydrolase, subfamily IA, variant 3 K07025 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000005807 294.0
DYD1_k127_5849156_6 PFAM regulatory protein TetR K05501 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000009124 273.0
DYD1_k127_5849156_7 Belongs to the small heat shock protein (HSP20) family K13993 - - 0.0000000000000000000000000000000000000000000000126 175.0
DYD1_k127_5857516_0 2-methylcitrate dehydratase K01720 - 4.2.1.79 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003003 595.0
DYD1_k127_5857516_1 AMP-binding enzyme C-terminal domain K02182 - 6.2.1.48 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002569 561.0
DYD1_k127_5857516_10 - - - - 0.000000000000000000000000000000000000000034 174.0
DYD1_k127_5857516_11 Plays an important role in the de novo pathway of purine nucleotide biosynthesis. Catalyzes the first committed step in the biosynthesis of AMP from IMP K01939 - 6.3.4.4 0.00000000000000000000000000000008362 125.0
DYD1_k127_5857516_12 - - - - 0.000000000000000000000000000386 115.0
DYD1_k127_5857516_13 - - - - 0.000000000000000002226 87.0
DYD1_k127_5857516_14 PFAM peptidase S1 and S6, chymotrypsin Hap K04771 - 3.4.21.107 0.00005769 54.0
DYD1_k127_5857516_2 COG0526, thiol-disulfide isomerase and thioredoxins - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005508 541.0
DYD1_k127_5857516_3 Putative cyclase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001171 415.0
DYD1_k127_5857516_4 PFAM conserved - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000004003 291.0
DYD1_k127_5857516_5 Tripartite tricarboxylate transporter family receptor - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000007929 289.0
DYD1_k127_5857516_6 Catalyzes the decarboxylation of oxaloacetate into pyruvate. Seems to play a role in maintaining cellular concentrations of bicarbonate and pyruvate K01003 - 4.1.1.3 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000004546 282.0
DYD1_k127_5857516_7 MmgE/PrpD family - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000008027 271.0
DYD1_k127_5857516_8 oxidoreductase - - - 0.000000000000000000000000000000000000000000000000000000000000002977 231.0
DYD1_k127_5857516_9 PFAM conserved - - - 0.00000000000000000000000000000000000000000000000000000000000002635 228.0
DYD1_k127_586562_0 Belongs to the TPP enzyme family K01577 - 4.1.1.8 2.806e-321 989.0
DYD1_k127_586562_1 CoA-transferase family III K07749,K14471,K14472 - 2.8.3.16,2.8.3.22 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001859 581.0
DYD1_k127_586562_2 Tripartite tricarboxylate transporter TctA family K07793 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001018 558.0
DYD1_k127_586562_3 Formyl transferase, C-terminal domain K00604 - 2.1.2.9 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001584 446.0
DYD1_k127_586562_4 serine threonine protein kinase K12132 - 2.7.11.1 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009519 318.0
DYD1_k127_586562_5 Cyclic nucleotide-monophosphate binding domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000001651 279.0
DYD1_k127_586562_6 SMART protein phosphatase 2C domain protein K20074 - 3.1.3.16 0.0000000000000002151 82.0
DYD1_k127_5870631_0 Tripartite tricarboxylate transporter family receptor - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000003425 290.0
DYD1_k127_5870631_1 Trypsin-like peptidase domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000006894 287.0
DYD1_k127_5870631_2 KR domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000001624 238.0
DYD1_k127_5870631_3 Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain K03520 - 1.2.5.3 0.000000000000000000000000000009792 123.0
DYD1_k127_5870631_4 Forkhead associated domain - - - 0.0000000000000000000000005791 117.0
DYD1_k127_5870632_0 Required for accurate and efficient protein synthesis under certain stress conditions. May act as a fidelity factor of the translation reaction, by catalyzing a one-codon backward translocation of tRNAs on improperly translocated ribosomes. Back- translocation proceeds from a post-translocation (POST) complex to a pre-translocation (PRE) complex, thus giving elongation factor G a second chance to translocate the tRNAs correctly. Binds to ribosomes in a GTP-dependent manner K03596 - - 2.106e-319 985.0
DYD1_k127_5870632_1 The UvrABC repair system catalyzes the recognition and processing of DNA lesions. UvrC both incises the 5' and 3' sides of the lesion. The N-terminal half is responsible for the 3' incision and the C-terminal half is responsible for the 5' incision K03703 - - 3.005e-240 756.0
DYD1_k127_5870632_10 Belongs to the CDP-alcohol phosphatidyltransferase class-I family K00995,K08744 - 2.7.8.41,2.7.8.5 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000002282 280.0
DYD1_k127_5870632_11 Involved in DNA repair and RecF pathway recombination K03584 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000001485 278.0
DYD1_k127_5870632_12 Digests double-stranded RNA. Involved in the processing of primary rRNA transcript to yield the immediate precursors to the large and small rRNAs (23S and 16S). Processes some mRNAs, and tRNAs when they are encoded in the rRNA operon. Processes pre- crRNA and tracrRNA of type II CRISPR loci if present in the organism K03685 GO:0003674,GO:0003676,GO:0003723,GO:0003725,GO:0003824,GO:0004518,GO:0004519,GO:0004521,GO:0004525,GO:0004540,GO:0005488,GO:0006139,GO:0006396,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0009987,GO:0010467,GO:0016070,GO:0016787,GO:0016788,GO:0016891,GO:0016893,GO:0032296,GO:0034641,GO:0043170,GO:0044237,GO:0044238,GO:0046483,GO:0071704,GO:0090304,GO:0090305,GO:0090501,GO:0090502,GO:0097159,GO:0140098,GO:1901360,GO:1901363 3.1.26.3 0.00000000000000000000000000000000000000000000000000000000000000000000000000000002752 275.0
DYD1_k127_5870632_13 MucB/RseB C-terminal domain K03598 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000003691 276.0
DYD1_k127_5870632_14 Transfers the 4'-phosphopantetheine moiety from coenzyme A to a Ser of acyl-carrier-protein K00997 - 2.7.8.7 0.0000000000000000000000000000000000000000000001109 173.0
DYD1_k127_5870632_15 PFAM Anti sigma-E protein RseA family protein K03597 - - 0.000000000000000000000000001744 118.0
DYD1_k127_5870632_16 Domain of unknown function (DUF4845) - - - 0.000000000000000000008013 98.0
DYD1_k127_5870632_18 Uracil-DNA glycosylase K21929 - 3.2.2.27 0.0000001054 55.0
DYD1_k127_5870632_2 Belongs to the peptidase S1C family K04771 - 3.4.21.107 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000107 583.0
DYD1_k127_5870632_3 Plays a role in peptidoglycan recycling by cleaving the terminal beta-1,4-linked N-acetylglucosamine (GlcNAc) from peptide-linked peptidoglycan fragments, giving rise to free GlcNAc, anhydro-N-acetylmuramic acid and anhydro-N-acetylmuramic acid-linked peptides K00997,K01207 - 2.7.8.7,3.2.1.52 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000244 458.0
DYD1_k127_5870632_4 Belongs to the peptidase S26 family K03100 - 3.4.21.89 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002856 411.0
DYD1_k127_5870632_5 An essential GTPase that binds both GDP and GTP, with rapid nucleotide exchange. Plays a role in 16S rRNA processing and 30S ribosomal subunit biogenesis and possibly also in cell cycle regulation and energy metabolism K03595 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000903 333.0
DYD1_k127_5870632_6 RNA polymerase sigma factor K03088 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008458 323.0
DYD1_k127_5870632_7 Catalyzes the complicated ring closure reaction between the two acyclic compounds 1-deoxy-D-xylulose-5-phosphate (DXP) and 3-amino-2-oxopropyl phosphate (1-amino-acetone-3-phosphate or AAP) to form pyridoxine 5'-phosphate (PNP) and inorganic phosphate K03474 - 2.6.99.2 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001039 316.0
DYD1_k127_5870632_8 Involved in peptide bond synthesis. Stimulates efficient translation and peptide-bond synthesis on native or reconstituted 70S ribosomes in vitro. Probably functions indirectly by altering the affinity of the ribosome for aminoacyl-tRNA, thus increasing their reactivity as acceptors for peptidyl transferase K02356 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003558 304.0
DYD1_k127_5870632_9 Cation efflux family - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000001007 295.0
DYD1_k127_5876085_0 Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain K03520 - 1.2.5.3 6.144e-208 674.0
DYD1_k127_5876085_1 Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain K03520 - 1.2.5.3 4.149e-200 649.0
DYD1_k127_5876085_10 Enoyl-CoA hydratase/isomerase K01661,K07536 - 4.1.3.36 0.0000000000000000000000000000000000000000000000000000000000000005415 231.0
DYD1_k127_5876085_11 PFAM Glyoxalase bleomycin resistance protein dioxygenase K05606 - 5.1.99.1 0.0000000000000000000000000000000000001366 145.0
DYD1_k127_5876085_12 Protein PsiE homolog K13256 GO:0005575,GO:0005623,GO:0005886,GO:0016020,GO:0044464,GO:0071944 - 0.0000000000000000000000000000000001109 137.0
DYD1_k127_5876085_13 Peptidase family M28 - - - 0.000000000000000000000000002813 117.0
DYD1_k127_5876085_2 hydrolases or acyltransferases, alpha beta hydrolase superfamily - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001302 593.0
DYD1_k127_5876085_3 Malate/L-lactate dehydrogenase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001573 449.0
DYD1_k127_5876085_4 CoA-transferase family III - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006745 443.0
DYD1_k127_5876085_5 COG0626 Cystathionine beta-lyases cystathionine gamma-synthases K01760 - 4.4.1.8 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003329 439.0
DYD1_k127_5876085_6 phosphogluconate dehydrogenase (decarboxylating) activity K00020 - 1.1.1.31 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000076 366.0
DYD1_k127_5876085_7 Oxidoreductase family, NAD-binding Rossmann fold - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001747 342.0
DYD1_k127_5876085_8 Aerobic-type carbon monoxide dehydrogenase, middle subunit CoxM K03519 - 1.2.5.3 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000331 305.0
DYD1_k127_5876085_9 [2Fe-2S] binding domain K03518 - 1.2.5.3 0.000000000000000000000000000000000000000000000000000000000000000009588 229.0
DYD1_k127_5878653_0 Catalyzes the interconversion of 2-phosphoglycerate and 3-phosphoglycerate K15633 - 5.4.2.12 1.179e-225 708.0
DYD1_k127_5878653_1 Peptidase family M23 - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000702 381.0
DYD1_k127_5878653_2 Belongs to the peptidase S41A family K03797 - 3.4.21.102 0.00000000000000000000000000000000000000000002808 163.0
DYD1_k127_5878653_3 Transcriptional regulator - - - 0.0000000000000000000000000000000000000000000637 162.0
DYD1_k127_5883023_0 Catalyzes the irreversible transfer of a propylamine group from the amino donor S-adenosylmethioninamine (decarboxy- AdoMet) to putrescine (1,4-diaminobutane) to yield spermidine K00797 - 2.5.1.16 5.038e-264 845.0
DYD1_k127_5883023_1 COG0028 Thiamine pyrophosphate-requiring enzymes acetolactate synthase, pyruvate dehydrogenase (cytochrome), glyoxylate carboligase, phosphonopyruvate decarboxylase K03852 - 2.3.3.15 2.236e-256 803.0
DYD1_k127_5883023_2 transposase IS116 IS110 IS902 family - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001211 345.0
DYD1_k127_5883023_3 Transcriptional regulator K02529 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003857 340.0
DYD1_k127_5921562_0 type IV-A pilus assembly ATPase PilB K02652 - - 5.444e-211 670.0
DYD1_k127_5921562_1 Sigma-54 interaction domain - - - 2.561e-205 649.0
DYD1_k127_5921562_10 ABC transporter K02065 - - 0.000000000000000000000000000000000000000000000000000009327 191.0
DYD1_k127_5921562_11 belongs to the thioredoxin family K03671,K05838 - - 0.000000000000000000000000000000000000000003063 171.0
DYD1_k127_5921562_12 - - - - 0.0000000000000000000000002268 117.0
DYD1_k127_5921562_13 von Willebrand factor, type A K07114 - - 0.00000000003148 69.0
DYD1_k127_5921562_2 PFAM type II secretion system K02653 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004231 471.0
DYD1_k127_5921562_3 PFAM Sporulation domain protein - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000639 434.0
DYD1_k127_5921562_4 Luciferase-like monooxygenase K00494 - 1.14.14.3 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004458 420.0
DYD1_k127_5921562_5 Secretin and TonB N terminus short domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007767 432.0
DYD1_k127_5921562_6 ATPase activity, coupled to transmembrane movement of substances - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000001038 298.0
DYD1_k127_5921562_7 - - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000006611 286.0
DYD1_k127_5921562_8 P-aminobenzoate N-oxygenase AurF - - - 0.0000000000000000000000000000000000000000000000000000000000000008419 228.0
DYD1_k127_5921562_9 3-beta hydroxysteroid dehydrogenase/isomerase family - - - 0.0000000000000000000000000000000000000000000000000000000000005633 221.0
DYD1_k127_5950509_0 aldehyde ferredoxin oxidoreductase K03738 - 1.2.7.5 0.0 1048.0
DYD1_k127_5950509_1 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain K01652 - 2.2.1.6 1.533e-235 741.0
DYD1_k127_5950509_10 acid transport system permease K09970 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006127 359.0
DYD1_k127_5950509_11 Pyridoxal-phosphate dependent enzyme K01733 - 4.2.3.1 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007461 342.0
DYD1_k127_5950509_12 4Fe-4S dicluster domain K05796 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000001402 284.0
DYD1_k127_5950509_13 Protein conserved in bacteria - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000002293 284.0
DYD1_k127_5950509_14 TRAP-type C4-dicarboxylate transport system, large permease K11690 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000004017 277.0
DYD1_k127_5950509_15 Belongs to the UPF0255 family - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000001911 266.0
DYD1_k127_5950509_16 COG2513 PEP phosphonomutase and related enzymes K01637 GO:0003674,GO:0003824,GO:0004451,GO:0005975,GO:0006081,GO:0006082,GO:0006097,GO:0008150,GO:0008152,GO:0009987,GO:0016829,GO:0016830,GO:0016833,GO:0019752,GO:0032787,GO:0043436,GO:0044237,GO:0044238,GO:0044262,GO:0044281,GO:0046487,GO:0071704 4.1.3.1 0.00000000000000000000000000000000000000000000000000000000000000000000000004366 261.0
DYD1_k127_5950509_17 Tripartite tricarboxylate transporter family receptor - - - 0.000000000000000000000000000000000000000000000000000000000000000000001315 250.0
DYD1_k127_5950509_18 Tripartite tricarboxylate transporter family receptor - - - 0.000000000000000000000000000000000000000000000000000000000000000000006781 246.0
DYD1_k127_5950509_19 beta-N-acetylglucosaminidase K01197,K15719 GO:0003674,GO:0003824,GO:0004553,GO:0004563,GO:0005488,GO:0005515,GO:0005975,GO:0006464,GO:0006517,GO:0006807,GO:0008150,GO:0008152,GO:0009100,GO:0009987,GO:0015929,GO:0016231,GO:0016787,GO:0016798,GO:0019538,GO:0030246,GO:0036211,GO:0042802,GO:0043170,GO:0043412,GO:0044237,GO:0044238,GO:0044260,GO:0044267,GO:0071704,GO:1901135,GO:1901564 2.3.1.48,3.2.1.169,3.2.1.35 0.00000000000000000000000000000000000000000000000000000000000000327 234.0
DYD1_k127_5950509_2 FAD-dependent pyridine - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004009 521.0
DYD1_k127_5950509_20 Major Facilitator Superfamily - - - 0.0000000000000000000000000000000000000000000000000000000000001519 228.0
DYD1_k127_5950509_21 Evidence 3 Function proposed based on presence of conserved amino acid motif, structural feature or limited homology - - - 0.000000000000000000000000000000000000000000000000000000009928 215.0
DYD1_k127_5950509_22 Major Facilitator Superfamily - - - 0.000000000000000000000000000000000000000000000000002128 199.0
DYD1_k127_5950509_23 Endoribonuclease L-PSP K09021 - - 0.00000000000000000000000000000000000000009202 152.0
DYD1_k127_5950509_24 lactoylglutathione lyase activity - - - 0.00000000000000000000000000000002521 135.0
DYD1_k127_5950509_25 Taurine catabolism dioxygenase TauD, TfdA family K03119,K06912 - 1.14.11.17 0.0000000000000000000000001195 108.0
DYD1_k127_5950509_26 Mut7-C ubiquitin - - - 0.000000000000000000000001423 108.0
DYD1_k127_5950509_27 - - - - 0.000000000000000000008062 96.0
DYD1_k127_5950509_28 Domain of unknown function (DUF296) K06934 - - 0.0000000000000000008412 99.0
DYD1_k127_5950509_29 - - - - 0.0000000000003496 72.0
DYD1_k127_5950509_3 Belongs to the TPP enzyme family - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005816 484.0
DYD1_k127_5950509_30 C4-dicarboxylate ABC transporter permease K11689 - - 0.0000009996 59.0
DYD1_k127_5950509_4 FMN-dependent dehydrogenase K00101,K15054 - 1.1.2.3,1.1.99.31 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006585 458.0
DYD1_k127_5950509_5 general L-amino acid-binding periplasmic protein AapJ K09969 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005751 402.0
DYD1_k127_5950509_6 COG0765 ABC-type amino acid transport system, permease component K09971 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001013 396.0
DYD1_k127_5950509_7 Rhomboid family - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006213 381.0
DYD1_k127_5950509_8 ATPases associated with a variety of cellular activities K02028,K02029,K09972 GO:0000166,GO:0003674,GO:0005488,GO:0005524,GO:0008144,GO:0017076,GO:0030554,GO:0032553,GO:0032555,GO:0032559,GO:0035639,GO:0036094,GO:0043167,GO:0043168,GO:0097159,GO:0097367,GO:1901265,GO:1901363 3.6.3.21 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008394 374.0
DYD1_k127_5950509_9 Amidase K02433 - 6.3.5.6,6.3.5.7 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002996 375.0
DYD1_k127_6016913_0 Oxidoreductase NAD-binding domain K02613,K05916,K07006 - 1.14.12.17 9.694e-239 757.0
DYD1_k127_6016913_1 Amidase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003069 529.0
DYD1_k127_6016913_10 cAMP biosynthetic process - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003961 381.0
DYD1_k127_6016913_11 NHL repeat - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003223 359.0
DYD1_k127_6016913_12 Cupin domain K00450 - 1.13.11.4 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001198 325.0
DYD1_k127_6016913_13 Glutathione S-transferase, C-terminal domain K00799 - 2.5.1.18 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000004445 301.0
DYD1_k127_6016913_14 PFAM conserved - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000006106 298.0
DYD1_k127_6016913_15 PFAM conserved - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000002448 297.0
DYD1_k127_6016913_16 PFAM amidohydrolase 2 - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000001156 285.0
DYD1_k127_6016913_17 Uracil-DNA glycosylase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000004602 270.0
DYD1_k127_6016913_18 Tripartite tricarboxylate transporter family receptor - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000001335 270.0
DYD1_k127_6016913_19 HAD-superfamily hydrolase, subfamily IA, variant 2 (HAD-like) K01560 - 3.8.1.2 0.000000000000000000000000000000000000000000000000000000000000000000000000000882 261.0
DYD1_k127_6016913_2 Metal-dependent hydrolase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002807 458.0
DYD1_k127_6016913_20 Cytochrome P460 - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000003725 252.0
DYD1_k127_6016913_21 Tripartite tricarboxylate transporter family receptor - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000004098 266.0
DYD1_k127_6016913_22 ABC transporter (Permease) K02026 - - 0.00000000000000000000000000000000000000000000000000000000000000000000007588 250.0
DYD1_k127_6016913_23 - - - - 0.0000000000000000000000000000000000000000000000000000000000000000004458 239.0
DYD1_k127_6016913_24 TIM-barrel fold metal-dependent hydrolase - - - 0.00000000000000000000000000000000000000000000000000000000000000002136 243.0
DYD1_k127_6016913_25 PFAM major facilitator superfamily MFS_1 - - - 0.00000000000000000000000000000000000000000000000000000000000001637 231.0
DYD1_k127_6016913_26 Domain of unknown function (DUF4439) - - - 0.00000000000000000000000000000000000000000000000000000002702 203.0
DYD1_k127_6016913_27 Amidohydrolase K03392,K22213 - 4.1.1.45,4.1.1.52 0.00000000000000000000000000000000000000000000000000000007289 215.0
DYD1_k127_6016913_28 Alpha/beta hydrolase family - - - 0.0000000000000000000000000000000000000000000000000000001156 203.0
DYD1_k127_6016913_29 Amidohydrolase - - - 0.0000000000000000000000000000000000000000000000000001204 201.0
DYD1_k127_6016913_3 Lecithin:cholesterol acyltransferase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003024 447.0
DYD1_k127_6016913_30 Binding-protein-dependent transport system inner membrane component K02025,K05814,K17316 - - 0.0000000000000000000000000000000000000000000000000009858 196.0
DYD1_k127_6016913_31 PFAM Cupin 2, conserved barrel domain protein - - - 0.000000000000000000000000000000000000000000000001932 177.0
DYD1_k127_6016913_32 Belongs to the sigma-70 factor family. ECF subfamily K03088 - - 0.000000000000000000000000000000000000000000000003109 185.0
DYD1_k127_6016913_33 Glyoxalase-like domain - - - 0.00000000000000000000000000000000000000000000001365 179.0
DYD1_k127_6016913_34 Oxidoreductase family, C-terminal alpha/beta domain K19181 - 1.1.1.292 0.00000000000000000000000000000000000000000000002677 183.0
DYD1_k127_6016913_35 PFAM Bacterial extracellular solute-binding protein K02027 - - 0.00000000000000000000000000000000000000000000007694 185.0
DYD1_k127_6016913_36 Conserved hypothetical protein (Lin0512_fam) - - - 0.000000000000000000000000000000000000000000001331 168.0
DYD1_k127_6016913_37 Conserved hypothetical protein (Lin0512_fam) - - - 0.000000000000000000000000000000000000000000006457 166.0
DYD1_k127_6016913_38 Glutathione-dependent formaldehyde-activating enzyme - - - 0.0000000000000000000000000000000000000000002986 162.0
DYD1_k127_6016913_39 Glutathione-dependent formaldehyde-activating enzyme - - - 0.000000000000000000000000000000000000000004344 159.0
DYD1_k127_6016913_4 Transcriptional regulator - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008149 421.0
DYD1_k127_6016913_40 SNARE associated Golgi protein - - - 0.0000000000000000000000000000000000000002229 158.0
DYD1_k127_6016913_41 Conserved hypothetical protein (Lin0512_fam) - - - 0.0000000000000000000000000000000000000007716 154.0
DYD1_k127_6016913_42 Protein conserved in bacteria - - - 0.000000000000000000000000000000000000009785 146.0
DYD1_k127_6016913_43 Conserved hypothetical protein (Lin0512_fam) - - - 0.0000000000000000000000000000000000000255 154.0
DYD1_k127_6016913_44 MarR family - - - 0.000000000000000000000000000000000002865 143.0
DYD1_k127_6016913_45 Rhodanese Homology Domain - - - 0.0000000000000000000000000000000007284 134.0
DYD1_k127_6016913_46 electron transfer activity K08738 - - 0.000000000000000000000000000000005722 132.0
DYD1_k127_6016913_47 regulation of ryanodine-sensitive calcium-release channel activity - - - 0.000000000000000000000000007553 124.0
DYD1_k127_6016913_48 - - - - 0.00000000000000006994 83.0
DYD1_k127_6016913_49 Uncharacterized ACR, COG1678 K07735 - - 0.00000000000001381 83.0
DYD1_k127_6016913_5 TOBE domain K10112 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001895 411.0
DYD1_k127_6016913_50 Domain of unknown function (DUF4440) - - - 0.0000000000004222 76.0
DYD1_k127_6016913_52 Domain of unknown function (DUF4396) - - - 0.000000004609 59.0
DYD1_k127_6016913_6 transcription factor binding K15836 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005544 380.0
DYD1_k127_6016913_7 Asp-tRNAAsn Glu-tRNAGln amidotransferase A subunit and related amidases K01426 - 3.5.1.4 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003265 379.0
DYD1_k127_6016913_8 Belongs to the GST superfamily K11209 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001279 364.0
DYD1_k127_6016913_9 Belongs to the amidase family K02433 - 6.3.5.6,6.3.5.7 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001335 378.0
DYD1_k127_6026270_0 The UvrABC repair system catalyzes the recognition and processing of DNA lesions. UvrA is an ATPase and a DNA-binding protein. A damage recognition complex composed of 2 UvrA and 2 UvrB subunits scans DNA for abnormalities. When the presence of a lesion has been verified by UvrB, the UvrA molecules dissociate K03701 - - 0.0 1506.0
DYD1_k127_6026270_1 MOFRL family K11529 - 2.7.1.165 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001252 528.0
DYD1_k127_6026270_2 Sugar (and other) transporter - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002153 512.0
DYD1_k127_6083618_0 FAD dependent oxidoreductase - - - 1.362e-207 656.0
DYD1_k127_6083618_1 MmgE PrpD family protein - - - 6.983e-202 643.0
DYD1_k127_6083618_2 MmgE PrpD family protein - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000557 554.0
DYD1_k127_6083618_3 Peptidase family M28 K06016 - 3.5.1.6,3.5.1.87 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007788 438.0
DYD1_k127_6083618_4 2-methylcitrate dehydratase activity K01720 GO:0003674,GO:0003824,GO:0005575,GO:0005618,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006082,GO:0006629,GO:0006631,GO:0008150,GO:0008152,GO:0009056,GO:0009062,GO:0009268,GO:0009628,GO:0009987,GO:0010447,GO:0016042,GO:0016054,GO:0016829,GO:0016835,GO:0016836,GO:0016999,GO:0017001,GO:0017144,GO:0019541,GO:0019543,GO:0019626,GO:0019629,GO:0019679,GO:0019752,GO:0030312,GO:0032787,GO:0042737,GO:0043436,GO:0044237,GO:0044238,GO:0044242,GO:0044248,GO:0044255,GO:0044281,GO:0044282,GO:0044424,GO:0044444,GO:0044464,GO:0046395,GO:0046459,GO:0047547,GO:0050896,GO:0071704,GO:0071944,GO:0072329,GO:1901575 4.2.1.79 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002225 353.0
DYD1_k127_6083618_5 PFAM conserved - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000005592 277.0
DYD1_k127_6083618_6 Saccharopine dehydrogenase K00290 - 1.5.1.7 0.0000000446 65.0
DYD1_k127_609954_0 CoA binding domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001779 544.0
DYD1_k127_609954_1 Berberine and berberine like - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009642 502.0
DYD1_k127_609954_2 Iron-containing alcohol dehydrogenase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003161 456.0
DYD1_k127_609954_3 FAD binding domain K19189 - 1.14.13.10 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002252 366.0
DYD1_k127_609954_4 CoA-binding domain protein K09181 - - 0.00000000000000000000000000000000000004597 145.0
DYD1_k127_609954_5 methyltransferase K03183 - 2.1.1.163,2.1.1.201 0.0000000000000000000000000000000003443 136.0
DYD1_k127_609954_6 Thioesterase superfamily K18700 - 3.1.2.29 0.000000000000000000000000005049 115.0
DYD1_k127_609954_7 - - - - 0.0000000000000000000001208 103.0
DYD1_k127_609954_8 - - - - 0.000007789 49.0
DYD1_k127_6148374_0 COG1529 Aerobic-type carbon monoxide dehydrogenase large subunit CoxL CutL homologs K03520 - 1.2.5.3 2.271e-212 683.0
DYD1_k127_6148374_1 Murein-degrading enzyme that degrades murein glycan strands and insoluble, high-molecular weight murein sacculi, with the concomitant formation of a 1,6-anhydromuramoyl product. Lytic transglycosylases (LTs) play an integral role in the metabolism of the peptidoglycan (PG) sacculus. Their lytic action creates space within the PG sacculus to allow for its expansion as well as for the insertion of various structures such as secretion systems and flagella K18691 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001807 358.0
DYD1_k127_6148374_2 PFAM extracellular solute-binding protein family 3 K02030,K09969,K10001 - - 0.0000000000000000000000000000000000000000000000000000000000000000000002533 249.0
DYD1_k127_6148374_3 Histidine phosphatase superfamily (branch 1) - - - 0.0000000000000000000000000000000000000000011 163.0
DYD1_k127_6148374_4 Belongs to the aspartokinase family K00928 GO:0003674,GO:0003824,GO:0004072,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006082,GO:0006520,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0008652,GO:0009058,GO:0009507,GO:0009532,GO:0009536,GO:0009570,GO:0009987,GO:0016053,GO:0016301,GO:0016310,GO:0016740,GO:0016772,GO:0016774,GO:0019202,GO:0019752,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0043436,GO:0044237,GO:0044238,GO:0044249,GO:0044281,GO:0044283,GO:0044422,GO:0044424,GO:0044434,GO:0044435,GO:0044444,GO:0044446,GO:0044464,GO:0046394,GO:0071704,GO:1901564,GO:1901566,GO:1901576 2.7.2.4 0.000000000000000000707 86.0
DYD1_k127_6148374_5 surface antigen - - - 0.0000266 55.0
DYD1_k127_6148374_6 17 kDa surface antigen - - - 0.0001857 51.0
DYD1_k127_6174005_0 ATPase family associated with various cellular activities (AAA) K03924 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005274 522.0
DYD1_k127_6174005_1 L-carnitine dehydratase bile acid-inducible protein - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001842 442.0
DYD1_k127_6174005_10 Methyltransferase domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000003339 265.0
DYD1_k127_6174005_11 PFAM CBS domain containing protein - - - 0.000000000000000000000000000000000000000000000000000003227 193.0
DYD1_k127_6174005_12 Transposase - - - 0.00000000000000000000000000000000000000000000002473 172.0
DYD1_k127_6174005_13 OmpA family K03286 - - 0.0000000000000000000000000000000000000001219 157.0
DYD1_k127_6174005_14 PFAM transport-associated K04065 - - 0.00000000000000000000000000000000000001866 146.0
DYD1_k127_6174005_15 Belongs to the UPF0337 (CsbD) family - - - 0.000000000000000000000000000000002497 130.0
DYD1_k127_6174005_16 - - - - 0.00000000000000000000001812 102.0
DYD1_k127_6174005_17 - - - - 0.0000000000000007538 78.0
DYD1_k127_6174005_18 - - - - 0.00000000000004339 75.0
DYD1_k127_6174005_19 - - - - 0.000001335 53.0
DYD1_k127_6174005_2 von Willebrand factor (vWF) type A domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006368 392.0
DYD1_k127_6174005_3 von Willebrand factor, type A K07114 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006288 384.0
DYD1_k127_6174005_4 Von Willebrand factor type A K07114 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003426 342.0
DYD1_k127_6174005_5 Belongs to the HpcH HpaI aldolase family K01644 - 4.1.3.34 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001083 316.0
DYD1_k127_6174005_6 Putative neutral zinc metallopeptidase K07054 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001252 312.0
DYD1_k127_6174005_7 peptidase S1 and S6, chymotrypsin Hap - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004987 313.0
DYD1_k127_6174005_8 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000258 299.0
DYD1_k127_6174005_9 N-terminal half of MaoC dehydratase K09709,K18291 - 4.2.1.153,4.2.1.56 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000004481 293.0
DYD1_k127_6184433_0 Belongs to the TPP enzyme family K01652 - 2.2.1.6 1.408e-268 839.0
DYD1_k127_6184433_1 ATP binding to DnaK triggers the release of the substrate protein, thus completing the reaction cycle. Several rounds of ATP-dependent interactions between DnaJ, DnaK and GrpE are required for fully efficient folding. Also involved, together with DnaK and GrpE, in the DNA replication of plasmids through activation of initiation proteins K03686 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003857 597.0
DYD1_k127_6184433_2 Glutathione S-transferase - - - 0.000000000000000000000000000000000000000000000000000000000000004186 225.0
DYD1_k127_6184433_3 Mandelate racemase / muconate lactonizing enzyme, C-terminal domain - - - 0.000000000000000000000000000000000000000000000000000000001118 216.0
DYD1_k127_6184433_4 Macrocin-O-methyltransferase (TylF) K05303 - - 0.000000000000000000000000418 117.0
DYD1_k127_6184711_0 Protein of unknown function - - - 0.0 1160.0
DYD1_k127_6184711_1 Involved in the regulation of glutamine synthetase GlnA, a key enzyme in the process to assimilate ammonia. When cellular nitrogen levels are high, the C-terminal adenylyl transferase (AT) inactivates GlnA by covalent transfer of an adenylyl group from ATP to specific tyrosine residue of GlnA, thus reducing its activity. Conversely, when nitrogen levels are low, the N-terminal adenylyl removase (AR) activates GlnA by removing the adenylyl group by phosphorolysis, increasing its activity. The regulatory region of GlnE binds the signal transduction protein PII (GlnB) which indicates the nitrogen status of the cell K00982 - 2.7.7.42,2.7.7.89 1.073e-308 970.0
DYD1_k127_6184711_10 COG1053 Succinate dehydrogenase fumarate reductase flavoprotein subunit K13796 - - 2.257e-231 725.0
DYD1_k127_6184711_11 STAS domain K03321 - - 6.197e-217 689.0
DYD1_k127_6184711_12 COG0471 Di- and tricarboxylate transporters - - - 2.52e-212 677.0
DYD1_k127_6184711_13 B12 binding domain - - - 1.351e-210 685.0
DYD1_k127_6184711_14 4Fe-4S single cluster domain - - - 1.892e-210 659.0
DYD1_k127_6184711_15 FMN-binding domain protein - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001217 616.0
DYD1_k127_6184711_16 cytochrome d1 heme K19345 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001876 551.0
DYD1_k127_6184711_17 Stereospecific condensation of phosphoenolpyruvate (PEP) and D-erythrose-4-phosphate (E4P) giving rise to 3-deoxy-D- arabino-heptulosonate-7-phosphate (DAHP) K01626 - 2.5.1.54 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000277 546.0
DYD1_k127_6184711_18 Catalyzes the synthesis of beta-nicotinate D- ribonucleotide from nicotinate and 5-phospho-D-ribose 1-phosphate at the expense of ATP K00763 GO:0001666,GO:0003674,GO:0003824,GO:0004516,GO:0005575,GO:0005623,GO:0005886,GO:0006139,GO:0006725,GO:0006732,GO:0006733,GO:0006753,GO:0006793,GO:0006796,GO:0006807,GO:0006950,GO:0008150,GO:0008152,GO:0009058,GO:0009108,GO:0009117,GO:0009165,GO:0009435,GO:0009605,GO:0009607,GO:0009628,GO:0009987,GO:0016020,GO:0016740,GO:0016757,GO:0016763,GO:0016874,GO:0016879,GO:0018130,GO:0019359,GO:0019362,GO:0019363,GO:0019365,GO:0019438,GO:0019637,GO:0019674,GO:0034355,GO:0034641,GO:0034654,GO:0036293,GO:0043094,GO:0043173,GO:0043207,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0044403,GO:0044419,GO:0044464,GO:0046483,GO:0046496,GO:0047280,GO:0050896,GO:0051186,GO:0051188,GO:0051701,GO:0051704,GO:0051707,GO:0055086,GO:0070482,GO:0071704,GO:0071944,GO:0072524,GO:0072525,GO:0075136,GO:0090407,GO:1901293,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576 6.3.4.21 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001745 548.0
DYD1_k127_6184711_19 Cytochrome C and Quinol oxidase polypeptide I - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004462 546.0
DYD1_k127_6184711_2 Cytochrome D1 heme domain K15864 - 1.7.2.1,1.7.99.1 4.639e-284 893.0
DYD1_k127_6184711_20 Belongs to the class-IV pyridoxal-phosphate-dependent aminotransferase family K00826 - 2.6.1.42 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001596 504.0
DYD1_k127_6184711_21 Methyl-viologen-reducing hydrogenase, delta subunit - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008191 511.0
DYD1_k127_6184711_22 AAA domain K07028 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003032 484.0
DYD1_k127_6184711_23 Catalyzes the oxidation of the C8 methyl side group on heme O porphyrin ring into a formyl group K02259 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001149 450.0
DYD1_k127_6184711_24 PFAM Adenylyl cyclase class-3 4 guanylyl cyclase K01769 - 4.6.1.2 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009205 446.0
DYD1_k127_6184711_25 Sulfite exporter TauE/SafE K07090 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002848 436.0
DYD1_k127_6184711_26 Catalyzes the conversion of dihydroorotate to orotate with quinone as electron acceptor K00254 - 1.3.5.2 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001008 428.0
DYD1_k127_6184711_27 COG1335 Amidases related to nicotinamidase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007371 414.0
DYD1_k127_6184711_28 PFAM Nitrilase cyanide hydratase and apolipoprotein N-acyltransferase K11206 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004665 407.0
DYD1_k127_6184711_29 Alpha beta hydrolase K07019 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003703 394.0
DYD1_k127_6184711_3 PFAM Cytochrome c oxidase, subunit I K02274 - 1.9.3.1 1.499e-257 805.0
DYD1_k127_6184711_30 May conjugate Arg from its aminoacyl-tRNA to the N- termini of proteins containing an N-terminal aspartate or glutamate K21420 - 2.3.2.29 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005726 366.0
DYD1_k127_6184711_31 Glycosyltransferase family 9 (heptosyltransferase) K02843 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001043 371.0
DYD1_k127_6184711_32 Class II Aldolase and Adducin N-terminal domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003756 369.0
DYD1_k127_6184711_33 Multifunctional enzyme that catalyzes the SAM-dependent methylations of uroporphyrinogen III at position C-2 and C-7 to form precorrin-2 via precorrin-1. Then it catalyzes the NAD- dependent ring dehydrogenation of precorrin-2 to yield sirohydrochlorin. Finally, it catalyzes the ferrochelation of sirohydrochlorin to yield siroheme K02302,K02303 - 1.3.1.76,2.1.1.107,4.99.1.4 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000402 343.0
DYD1_k127_6184711_34 COG1522 Transcriptional regulators - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003411 340.0
DYD1_k127_6184711_35 Functions in the N-end rule pathway of protein degradation where it conjugates Leu, Phe and, less efficiently, Met from aminoacyl-tRNAs to the N-termini of proteins containing an N-terminal arginine or lysine K00684 - 2.3.2.6 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008882 320.0
DYD1_k127_6184711_36 Flavin transferase that catalyzes the transfer of the FMN moiety of FAD and its covalent binding to the hydroxyl group of a threonine residue in a target flavoprotein K03734 - 2.7.1.180 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007522 328.0
DYD1_k127_6184711_37 DNA repair enzyme that has both DNA N-glycosylase activity and AP-lyase activity. The DNA N-glycosylase activity releases various damaged pyrimidines from DNA by cleaving the N- glycosidic bond, leaving an AP (apurinic apyrimidinic) site. The AP-lyase activity cleaves the phosphodiester bond 3' to the AP site by a beta-elimination, leaving a 3'-terminal unsaturated sugar and a product with a terminal 5'-phosphate K10773 - 4.2.99.18 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000001565 302.0
DYD1_k127_6184711_38 phosphoglucomutase phosphomannomutase alpha beta alpha domain II K01835,K01840,K15778 GO:0000271,GO:0000287,GO:0003674,GO:0003824,GO:0004614,GO:0004615,GO:0005488,GO:0005975,GO:0005976,GO:0006082,GO:0006629,GO:0008150,GO:0008152,GO:0008610,GO:0008653,GO:0009058,GO:0009059,GO:0009103,GO:0009243,GO:0009244,GO:0009311,GO:0009312,GO:0009405,GO:0009987,GO:0016051,GO:0016053,GO:0016853,GO:0016866,GO:0016868,GO:0017144,GO:0019752,GO:0033692,GO:0034637,GO:0034645,GO:0042120,GO:0042121,GO:0043167,GO:0043169,GO:0043170,GO:0043436,GO:0044237,GO:0044238,GO:0044249,GO:0044255,GO:0044260,GO:0044262,GO:0044264,GO:0044281,GO:0044283,GO:0044419,GO:0046394,GO:0046401,GO:0046402,GO:0046872,GO:0051704,GO:0071704,GO:1901135,GO:1901137,GO:1901576,GO:1903509 5.4.2.2,5.4.2.8 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000009407 287.0
DYD1_k127_6184711_39 cytochrome c oxidase (Subunit II) K02275 - 1.9.3.1 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000002633 283.0
DYD1_k127_6184711_4 DNA polymerase X family K02347 - - 2.306e-256 801.0
DYD1_k127_6184711_40 Converts heme B (protoheme IX) to heme O by substitution of the vinyl group on carbon 2 of heme B porphyrin ring with a hydroxyethyl farnesyl side group K02257 - 2.5.1.141 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000001063 287.0
DYD1_k127_6184711_41 COG0664 cAMP-binding proteins - catabolite gene activator and regulatory subunit of cAMP-dependent protein kinases K21563 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000001838 280.0
DYD1_k127_6184711_42 Pfam Periplasmic binding protein K02016,K06858 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000001476 276.0
DYD1_k127_6184711_43 PFAM peptidase M48 Ste24p - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000008515 272.0
DYD1_k127_6184711_44 Adenosyltransferase K00798 GO:0000166,GO:0001882,GO:0001883,GO:0003674,GO:0003824,GO:0005488,GO:0005524,GO:0005525,GO:0006725,GO:0006766,GO:0006767,GO:0006807,GO:0008144,GO:0008150,GO:0008152,GO:0009058,GO:0009110,GO:0009235,GO:0009236,GO:0009987,GO:0016043,GO:0016740,GO:0016765,GO:0017076,GO:0017144,GO:0018130,GO:0019001,GO:0019003,GO:0019438,GO:0019538,GO:0022607,GO:0030091,GO:0030554,GO:0032549,GO:0032550,GO:0032553,GO:0032555,GO:0032559,GO:0032561,GO:0033013,GO:0033014,GO:0034641,GO:0035639,GO:0036094,GO:0042364,GO:0043167,GO:0043168,GO:0043170,GO:0043933,GO:0044085,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044281,GO:0044283,GO:0046483,GO:0051186,GO:0051188,GO:0051259,GO:0051260,GO:0065003,GO:0070206,GO:0070207,GO:0071704,GO:0071840,GO:0097159,GO:0097367,GO:1901265,GO:1901360,GO:1901362,GO:1901363,GO:1901564,GO:1901566,GO:1901576 2.5.1.17 0.000000000000000000000000000000000000000000000000000000000000000000001471 240.0
DYD1_k127_6184711_45 - - - - 0.00000000000000000000000000000000000000000000000000000000000000000002919 239.0
DYD1_k127_6184711_46 PFAM electron transport protein SCO1 SenC K07152 - - 0.0000000000000000000000000000000000000000000000000000000000000004722 241.0
DYD1_k127_6184711_47 transcriptional regulator AsnC family - - - 0.000000000000000000000000000000000000000000000000000000000000001352 223.0
DYD1_k127_6184711_48 overlaps another CDS with the same product name - - - 0.00000000000000000000000000000000000000000000000000000006765 202.0
DYD1_k127_6184711_49 Part of a membrane complex involved in electron transport K03616 - - 0.000000000000000000000000000000000000000000000000000001562 202.0
DYD1_k127_6184711_5 cation transport ATPase K01533 - 3.6.3.4 1.338e-247 790.0
DYD1_k127_6184711_50 Domain of unknown function (DUF4202) - - - 0.000000000000000000000000000000000000000000000000000002899 197.0
DYD1_k127_6184711_51 Belongs to the sigma-70 factor family. ECF subfamily K03088 - - 0.000000000000000000000000000000000000000000000000000264 194.0
DYD1_k127_6184711_52 Archease protein family (MTH1598/TM1083) - - - 0.00000000000000000000000000000000000000000000001343 174.0
DYD1_k127_6184711_53 - - - - 0.0000000000000000000000000000000000000000000001081 173.0
DYD1_k127_6184711_54 SnoaL-like domain - - - 0.00000000000000000000000000000000000004583 148.0
DYD1_k127_6184711_55 Hemerythrin HHE cation binding domain - - - 0.000000000000000000000000000000000001425 147.0
DYD1_k127_6184711_56 Anti-sigma-K factor rskA - - - 0.0000000000000000000000000000000009096 139.0
DYD1_k127_6184711_57 Cyclic nucleotide-monophosphate binding domain - - - 0.00000000000000000000000000000008649 132.0
DYD1_k127_6184711_58 Invasion gene expression up-regulator, SirB - - - 0.0000000000000000000000000000001689 127.0
DYD1_k127_6184711_59 Zinc-finger domain - - - 0.0000000000000000000000000000009335 122.0
DYD1_k127_6184711_6 Cytochrome b(N-terminal)/b6/petB - - - 1.877e-247 781.0
DYD1_k127_6184711_60 Cytochrome c K08738 - - 0.00000000000000000000000000005537 119.0
DYD1_k127_6184711_61 Hemerythrin HHE cation binding domain - - - 0.0000000000000000000000000091 117.0
DYD1_k127_6184711_62 Cytochrome C oxidase, cbb3-type, subunit III K19344 - - 0.00000000000000000000000009099 112.0
DYD1_k127_6184711_63 cytochrome oxidase assembly K02259 - - 0.000000000000000000003563 105.0
DYD1_k127_6184711_64 Protein of unknown function (DUF1161) - - - 0.0000000000000000004593 89.0
DYD1_k127_6184711_65 Cytochrome C oxidase, cbb3-type, subunit III - - - 0.00000000000000008932 83.0
DYD1_k127_6184711_66 Bacterial SH3 domain - - - 0.0000000000000009291 84.0
DYD1_k127_6184711_67 cytochrome oxidase maturation protein cbb3-type - - - 0.0000000000000906 76.0
DYD1_k127_6184711_68 - - - - 0.000000000000945 70.0
DYD1_k127_6184711_69 - - - - 0.0000000005948 63.0
DYD1_k127_6184711_7 Belongs to the RtcB family K14415,K18148 - 6.5.1.3 1.693e-246 768.0
DYD1_k127_6184711_70 Uncharacterized conserved protein (DUF2249) - - - 0.0000004286 59.0
DYD1_k127_6184711_8 modulator of DNA gyrase K03568 - - 3.509e-239 750.0
DYD1_k127_6184711_9 Cytochrome D1 heme domain - - - 1.241e-231 726.0
DYD1_k127_6190320_0 Malic enzyme K00029 - 1.1.1.40 4.126e-248 777.0
DYD1_k127_6190320_1 Involved in the TCA cycle. Catalyzes the stereospecific interconversion of fumarate to L-malate K01679 - 4.2.1.2 1.2e-213 680.0
DYD1_k127_6190320_10 Enoyl-(Acyl carrier protein) reductase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000007166 294.0
DYD1_k127_6190320_11 3'-to-5' exoribonuclease specific for small oligoribonucleotides K13288 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000004727 282.0
DYD1_k127_6190320_12 Converts cobyric acid to cobinamide by the addition of aminopropanol on the F carboxylic group K02227 - 6.3.1.10 0.00000000000000000000000000000000000000000000000000000000000000000000000000000003461 278.0
DYD1_k127_6190320_13 Etoposide-induced protein 2.4 (EI24) - - - 0.00000000000000000000000000000000000000000000000000009811 194.0
DYD1_k127_6190320_14 NUDIX domain - - - 0.000000000000000000000000000000000000000000000002041 182.0
DYD1_k127_6190320_15 diol metabolic process K01724 - 4.2.1.96 0.0000000000000000000000000000000000000000000001146 170.0
DYD1_k127_6190320_16 PFAM transcription elongation factor GreA GreB - - - 0.000000000000000000000000000000000000000000085 166.0
DYD1_k127_6190320_17 TIGRFAM clan AA aspartic protease, TIGR02281 family K06985 - - 0.000000000000000000000000000000000171 139.0
DYD1_k127_6190320_18 effector of murein hydrolase LrgA K06518 - - 0.00000000000000000000000000159 116.0
DYD1_k127_6190320_19 - - - - 0.00000000000000000000008735 102.0
DYD1_k127_6190320_2 Belongs to the GPI family K01810 - 5.3.1.9 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002908 597.0
DYD1_k127_6190320_20 Evidence 4 Homologs of previously reported genes of - - - 0.000000000000000002259 86.0
DYD1_k127_6190320_3 Belongs to the peptidase S1C family K04771 - 3.4.21.107 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008017 544.0
DYD1_k127_6190320_4 PFAM Peptidase M48 K06013 - 3.4.24.84 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002968 497.0
DYD1_k127_6190320_5 Patatin-like phospholipase K07001 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008494 433.0
DYD1_k127_6190320_6 His Kinase A (phosphoacceptor) domain K02484 - 2.7.13.3 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003623 432.0
DYD1_k127_6190320_7 One of several proteins that assist in the late maturation steps of the functional core of the 30S ribosomal subunit. Helps release RbfA from mature subunits. May play a role in the assembly of ribosomal proteins into the subunit. Circularly permuted GTPase that catalyzes slow GTP hydrolysis, GTPase activity is stimulated by the 30S ribosomal subunit K06949 - 3.1.3.100 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004498 336.0
DYD1_k127_6190320_8 Transcriptional regulatory protein, C terminal K02483,K07666 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001826 323.0
DYD1_k127_6190320_9 of murein hydrolase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000001971 306.0
DYD1_k127_6203408_0 SNARE associated Golgi protein - - - 0.0 1072.0
DYD1_k127_6203408_1 Belongs to the sodium solute symporter (SSF) (TC 2.A.21) family - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001247 606.0
DYD1_k127_6203408_10 DoxX K15977 - - 0.00000000000000000000000000000000000000000000000000000000000001919 225.0
DYD1_k127_6203408_11 Belongs to the sigma-70 factor family. ECF subfamily K03088 - - 0.0000000000000000000000000000000000000000000000000000003852 198.0
DYD1_k127_6203408_12 Domain of unknown function DUF302 - - - 0.00000000000000000000000000000000000000000002248 163.0
DYD1_k127_6203408_13 Glycosyl transferase group 2 family protein - - - 0.0000000000000000000000000000000000005642 146.0
DYD1_k127_6203408_14 Predicted integral membrane protein (DUF2282) - - - 0.00000000000000000000000000000001056 132.0
DYD1_k127_6203408_16 Bidirectionally degrades single-stranded DNA into large acid-insoluble oligonucleotides, which are then degraded further into small acid-soluble oligonucleotides K03602 - 3.1.11.6 0.000000000000000001035 88.0
DYD1_k127_6203408_2 PFAM Radical SAM - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001184 501.0
DYD1_k127_6203408_3 Belongs to the FPP GGPP synthase family K00795 - 2.5.1.1,2.5.1.10 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004108 417.0
DYD1_k127_6203408_4 Belongs to the UPF0276 family K09930 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004181 406.0
DYD1_k127_6203408_5 Protein of unknown function (DUF3179) - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005707 386.0
DYD1_k127_6203408_6 Protein of unknown function, DUF547 - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004213 316.0
DYD1_k127_6203408_7 Permuted papain-like amidase enzyme, YaeF/YiiX, C92 family - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000002647 296.0
DYD1_k127_6203408_8 COG0639 Diadenosine tetraphosphatase and related serine threonine protein phosphatases - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000002853 307.0
DYD1_k127_6203408_9 Putative DNA-binding domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000006752 276.0
DYD1_k127_6210473_0 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster - - - 0.0 1022.0
DYD1_k127_6210473_1 Pyruvate flavodoxin/ferredoxin oxidoreductase, thiamine diP-bdg K00174 - 1.2.7.11,1.2.7.3 2.299e-310 959.0
DYD1_k127_6210473_10 Belongs to the class-II pyridine nucleotide-disulfide oxidoreductase family K00384 - 1.8.1.9 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001929 530.0
DYD1_k127_6210473_11 MacB-like periplasmic core domain K02004 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003379 530.0
DYD1_k127_6210473_12 MacB-like periplasmic core domain K02004 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001176 531.0
DYD1_k127_6210473_13 AAA domain (Cdc48 subfamily) - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002871 466.0
DYD1_k127_6210473_14 Biotin-lipoyl like - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000123 467.0
DYD1_k127_6210473_15 VWA-like domain (DUF2201) - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006676 472.0
DYD1_k127_6210473_16 Branched-chain amino acid transport system permease K01998 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005974 454.0
DYD1_k127_6210473_17 Peptidogalycan biosysnthesis/recognition K09919 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002407 450.0
DYD1_k127_6210473_18 Belongs to the hyi family K01816 GO:0003674,GO:0003824,GO:0005488,GO:0005515,GO:0006081,GO:0006082,GO:0008150,GO:0008152,GO:0008903,GO:0009987,GO:0016853,GO:0016860,GO:0016861,GO:0019752,GO:0032787,GO:0042802,GO:0042803,GO:0043436,GO:0044237,GO:0044281,GO:0046487,GO:0046983,GO:0071704 5.3.1.22 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002014 401.0
DYD1_k127_6210473_19 Branched-chain amino acid transport K01996 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004244 401.0
DYD1_k127_6210473_2 Type II secretion system (T2SS), protein E, N-terminal domain K02454 - - 3.699e-257 805.0
DYD1_k127_6210473_20 Branched-chain amino acid ATP-binding cassette transporter K01995 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004059 375.0
DYD1_k127_6210473_21 Belongs to the binding-protein-dependent transport system permease family K01997 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001162 353.0
DYD1_k127_6210473_22 methylated-DNA- protein -cysteine S-methyltransferase K10778 - 2.1.1.63 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001608 344.0
DYD1_k127_6210473_23 ABC-type antimicrobial peptide transport system, ATPase component K02003 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005824 336.0
DYD1_k127_6210473_24 NMT1-like family K07080 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001225 341.0
DYD1_k127_6210473_25 Integral membrane protein TerC family - GO:0005575,GO:0005623,GO:0005886,GO:0016020,GO:0044464,GO:0071944 - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001481 322.0
DYD1_k127_6210473_26 N-terminal half of MaoC dehydratase K09709,K18291 - 4.2.1.153,4.2.1.56 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004536 308.0
DYD1_k127_6210473_27 Nudix hydrolase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000112 263.0
DYD1_k127_6210473_28 Endonuclease/Exonuclease/phosphatase family - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000161 267.0
DYD1_k127_6210473_29 xylan catabolic process K09252 - 3.1.1.73 0.0000000000000000000000000000000000000000000000000000000000001179 224.0
DYD1_k127_6210473_3 PFAM SNARE associated Golgi protein - - - 1.554e-228 729.0
DYD1_k127_6210473_30 Belongs to the P(II) protein family K04751 - - 0.000000000000000000000000000000000000000000000000000000001409 202.0
DYD1_k127_6210473_31 depolymerase - - - 0.0000000000000000000000000000000000000000000000000000007231 204.0
DYD1_k127_6210473_32 THIoesterase K18700 - 3.1.2.29 0.00000000000000000000000000000000000000000000000000002941 190.0
DYD1_k127_6210473_33 Probable cobalt transporter subunit (CbtA) - - - 0.0000000000000000000000000000000000000000000000002222 184.0
DYD1_k127_6210473_34 MobA-like NTP transferase domain - - - 0.000000000000000000000000000000000000000000000006615 178.0
DYD1_k127_6210473_35 Small MutS-related domain - - - 0.0000000000000000000000000000000000000000000001544 180.0
DYD1_k127_6210473_36 Acetyltransferase (GNAT) domain - - - 0.00000000000000000000000000000000002943 143.0
DYD1_k127_6210473_37 Cobalt transporter subunit CbtB - - - 0.0000003478 55.0
DYD1_k127_6210473_4 Catalyzes the ATP-dependent amidation of deamido-NAD to form NAD. Uses L-glutamine as a nitrogen source K01916,K01950 - 6.3.1.5,6.3.5.1 2.402e-205 653.0
DYD1_k127_6210473_5 Receptor family ligand binding region K01999 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006524 589.0
DYD1_k127_6210473_6 PFAM Thiamine pyrophosphate K00175 - 1.2.7.11,1.2.7.3 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001666 586.0
DYD1_k127_6210473_7 protein conserved in bacteria K09989 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008304 577.0
DYD1_k127_6210473_8 ATPase family associated with various cellular activities (AAA) - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000033 559.0
DYD1_k127_6210473_9 Ammonium Transporter K03320 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001197 573.0
DYD1_k127_62736_0 DNA polymerase involved in damage-induced mutagenesis and translesion synthesis (TLS). It is not the major replicative DNA polymerase K14162 - 2.7.7.7 0.0 1282.0
DYD1_k127_62736_1 Nucleotidyltransferase DNA polymerase involved in DNA repair K14161 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002839 396.0
DYD1_k127_62736_2 Cupin domain K00450 - 1.13.11.4 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004289 330.0
DYD1_k127_62736_3 TRAP transporter, 4TM 12TM fusion protein - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004517 339.0
DYD1_k127_62736_4 Component of the SOS system and an inhibitor of cell division. Accumulation of SulA causes rapid cessation of cell division and the appearance of long, non-septate filaments. In the presence of GTP, binds a polymerization-competent form of FtsZ in a 1 1 ratio, thus inhibiting FtsZ polymerization and therefore preventing it from participating in the assembly of the Z ring. This mechanism prevents the premature segregation of damaged DNA to daughter cells during cell division K13053,K14160 - - 0.00000000000000000000000000000000000000000000000000003071 198.0
DYD1_k127_62736_5 NMT1-like family K07080 - - 0.00000000000000000000000000000007087 139.0
DYD1_k127_6446303_0 Type II secretory pathway, ATPase PulE Tfp pilus assembly pathway, ATPase PilB - - - 0.0 1096.0
DYD1_k127_6446303_1 Belongs to the 5'-nucleotidase family K11751,K17224 - 3.1.3.5,3.6.1.45 3.386e-273 850.0
DYD1_k127_6446303_10 glycosyl transferase family 8 - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006362 353.0
DYD1_k127_6446303_11 TPR repeat - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001825 375.0
DYD1_k127_6446303_12 TPR repeat - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002702 357.0
DYD1_k127_6446303_13 TPR repeat - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009465 319.0
DYD1_k127_6446303_14 Methyltransferase fkbm family - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006143 315.0
DYD1_k127_6446303_15 TPR repeat - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000223 318.0
DYD1_k127_6446303_16 Thiosulfate-oxidizing multienzyme system protein SoxA K17222 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000003491 303.0
DYD1_k127_6446303_17 tRNA (guanine(37)-N(1))-methyltransferase activity - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000002538 274.0
DYD1_k127_6446303_18 Methyltransferase domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000007636 253.0
DYD1_k127_6446303_19 Catalyzes the conversion of (8S)-3',8-cyclo-7,8- dihydroguanosine 5'-triphosphate to cyclic pyranopterin monophosphate (cPMP) K03637 - 4.6.1.17 0.0000000000000000000000000000000000000000000000000000000000001766 216.0
DYD1_k127_6446303_2 metal-dependent phosphohydrolase HD sub domain - - - 2.528e-226 716.0
DYD1_k127_6446303_20 methyltransferase - - - 0.0000000000000000000000000000000000000000000000000000000000004219 218.0
DYD1_k127_6446303_21 tRNA (guanine(37)-N(1))-methyltransferase activity - - - 0.000000000000000000000000000000000000000000000000000000742 203.0
DYD1_k127_6446303_22 Cytochrome c K17223 - - 0.000000000000000000000000000000000000000000000000000003232 199.0
DYD1_k127_6446303_23 sulfur oxidation protein SoxY K17226 - - 0.00000000000000000000000000000000000000000573 160.0
DYD1_k127_6446303_24 Tetratricopeptide repeat - - - 0.00000000000000000000000000000000000001204 151.0
DYD1_k127_6446303_25 O-methyltransferase activity K05303 - - 0.000000000000000000000000000000000001685 146.0
DYD1_k127_6446303_26 Belongs to the N-Me-Phe pilin family K02650 - - 0.00000000000000000000000000000005926 129.0
DYD1_k127_6446303_27 Sulfurtransferase TusA K04085 - - 0.00000000000000000000000000000008342 124.0
DYD1_k127_6446303_28 Sulphur oxidation protein SoxZ K17227 - - 0.00000000000000000000000000003715 119.0
DYD1_k127_6446303_29 Belongs to the N-Me-Phe pilin family K02650 - - 0.000000000000000000000000008838 118.0
DYD1_k127_6446303_3 Cysteine-rich domain K03389 - 1.8.7.3,1.8.98.4,1.8.98.5,1.8.98.6 6.512e-222 693.0
DYD1_k127_6446303_30 CHASE2 K01768 - 4.6.1.1 0.00000000000000000000000001993 109.0
DYD1_k127_6446303_31 - - - - 0.00000000000000000000001998 102.0
DYD1_k127_6446303_32 - - - - 0.000000000000000000001705 103.0
DYD1_k127_6446303_4 serine threonine protein kinase K12132 - 2.7.11.1 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004038 513.0
DYD1_k127_6446303_5 peptidase m48, ste24p - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003256 484.0
DYD1_k127_6446303_6 repeat-containing protein - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003777 462.0
DYD1_k127_6446303_7 4Fe-4S dicluster domain K03390 - 1.8.7.3,1.8.98.4,1.8.98.5,1.8.98.6 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001131 423.0
DYD1_k127_6446303_8 tpr domain protein - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002944 407.0
DYD1_k127_6446303_9 cAMP phosphodiesterases class-II K01120 - 3.1.4.17 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001377 356.0
DYD1_k127_6455358_0 Peptidase M50 K16922 - - 9.193e-210 677.0
DYD1_k127_6455358_1 outer membrane efflux protein - - - 2.094e-197 635.0
DYD1_k127_6455358_2 Biotin-lipoyl like - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001093 443.0
DYD1_k127_6455358_3 OmpA MotB K02557 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003249 408.0
DYD1_k127_6455358_4 COG2931, RTX toxins and related Ca2 -binding proteins - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000001563 288.0
DYD1_k127_6455358_5 Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family - - - 0.0000000000000000000000000000000000000000000000000000000000000000003432 237.0
DYD1_k127_6550294_0 Part of a heterotetrameric complex that catalyzes the two-step biosynthesis of anthranilate, an intermediate in the biosynthesis of L-tryptophan. In the first step, the glutamine- binding beta subunit (TrpG) of anthranilate synthase (AS) provides the glutamine amidotransferase activity which generates ammonia as a substrate that, along with chorismate, is used in the second step, catalyzed by the large alpha subunit of AS (TrpE) to produce anthranilate. In the absence of TrpG, TrpE can synthesize anthranilate directly from chorismate and high concentrations of ammonia K01657 - 4.1.3.27 5.897e-227 711.0
DYD1_k127_6550294_1 Uncharacterized protein family UPF0004 K06168 - 2.8.4.3 2.138e-212 669.0
DYD1_k127_6550294_10 Glycosyl transferase family 41 - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001082 448.0
DYD1_k127_6550294_11 Transporter associated domain K06189 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002639 400.0
DYD1_k127_6550294_12 TIGRFAM Ubiquinone biosynthesis hydroxylase, UbiH UbiF VisC COQ6 K03185 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003174 400.0
DYD1_k127_6550294_13 Belongs to the ribulose-phosphate 3-epimerase family K01783 - 5.1.3.1 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001809 357.0
DYD1_k127_6550294_15 Glutamine amidotransferase of anthranilate synthase K01658 - 4.1.3.27 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002637 325.0
DYD1_k127_6550294_16 transmembrane transcriptional regulator (Anti-sigma factor) - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009812 323.0
DYD1_k127_6550294_17 Belongs to the TrpC family K01609 GO:0003674,GO:0003824,GO:0004425,GO:0016829,GO:0016830,GO:0016831 4.1.1.48 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002967 321.0
DYD1_k127_6550294_18 Phosphate acyltransferases K00655 - 2.3.1.51 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000508 307.0
DYD1_k127_6550294_19 Oxygenase that introduces the hydroxyl group at carbon five of 2-nonaprenyl-3-methyl-6-methoxy-1,4-benzoquinol resulting in the formation of 2-nonaprenyl-3-methyl-5-hydroxy-6-methoxy-1,4- benzoquinol K06134 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000001312 283.0
DYD1_k127_6550294_2 glycyl-tRNA synthetase beta K01879 - 6.1.1.14 4.331e-207 668.0
DYD1_k127_6550294_20 HAD-superfamily hydrolase, subfamily IA, variant 3 K01091 - 3.1.3.18 0.000000000000000000000000000000000000000000000000000000000000000000000000000000007851 274.0
DYD1_k127_6550294_21 D,D-heptose 1,7-bisphosphate phosphatase K03273 GO:0000287,GO:0003674,GO:0003824,GO:0005488,GO:0006793,GO:0006796,GO:0008150,GO:0008152,GO:0008270,GO:0009987,GO:0016311,GO:0016787,GO:0016788,GO:0016791,GO:0034200,GO:0042578,GO:0043167,GO:0043169,GO:0044237,GO:0046872,GO:0046914 3.1.3.82,3.1.3.83 0.000000000000000000000000000000000000000000000000000000000000000000000000000004992 265.0
DYD1_k127_6550294_22 DUF218 domain - - - 0.00000000000000000000000000000000000000000000000000000000000000002419 231.0
DYD1_k127_6550294_23 OsmC-like protein K07397 - - 0.0000000000000000000000000000000000000000000000000000000000000002058 224.0
DYD1_k127_6550294_24 PFAM ApaG domain protein K06195 - - 0.000000000000000000000000000000000000000000000000000000003809 201.0
DYD1_k127_6550294_25 Required for disulfide bond formation in some periplasmic proteins. Acts by transferring its disulfide bond to other proteins and is reduced in the process K03981 - 5.3.4.1 0.00000000000000000000000000000000000000000000000000000001058 206.0
DYD1_k127_6550294_26 Belongs to the sigma-70 factor family. ECF subfamily K03088 - - 0.00000000000000000000000000000000000000000000000004116 186.0
DYD1_k127_6550294_27 Single strand-specific metallo-endoribonuclease involved in late-stage 70S ribosome quality control and in maturation of the 3' terminus of the 16S rRNA K07042 - - 0.00000000000000000000000000000000000000000009351 165.0
DYD1_k127_6550294_28 This protein is one of the early assembly proteins of the 50S ribosomal subunit, although it is not seen to bind rRNA by itself. It is important during the early stages of 50S assembly K02871 - - 0.0000000000000000000000000000000000001017 143.0
DYD1_k127_6550294_29 Glycosyltransferase like family 2 K07011,K20444 - - 0.0000000000000000000000000000009607 136.0
DYD1_k127_6550294_3 SMART Tetratricopeptide domain protein - - - 7.334e-204 666.0
DYD1_k127_6550294_30 Gram-negative porin - - - 0.0000000000000124 86.0
DYD1_k127_6550294_4 Specifically catalyzes the decarboxylation of meso- diaminopimelate (meso-DAP) to L-lysine K01586 - 4.1.1.20 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001697 556.0
DYD1_k127_6550294_5 Transfers the fatty acyl group on membrane lipoproteins K03820 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006627 539.0
DYD1_k127_6550294_6 glycyl-tRNA synthetase alpha subunit K01878 - 6.1.1.14 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002956 508.0
DYD1_k127_6550294_7 Catalyzes the transfer of the phosphoribosyl group of 5- phosphorylribose-1-pyrophosphate (PRPP) to anthranilate to yield N-(5'-phosphoribosyl)-anthranilate (PRA) K00766 GO:0000162,GO:0003674,GO:0003824,GO:0004048,GO:0006082,GO:0006520,GO:0006568,GO:0006576,GO:0006586,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0008652,GO:0009058,GO:0009072,GO:0009073,GO:0009308,GO:0009309,GO:0009987,GO:0016053,GO:0016740,GO:0016757,GO:0016763,GO:0018130,GO:0019438,GO:0019752,GO:0034641,GO:0042401,GO:0042430,GO:0042435,GO:0043436,GO:0044106,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0044283,GO:0046219,GO:0046394,GO:0046483,GO:0071704,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576,GO:1901605,GO:1901607 2.4.2.18 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007264 479.0
DYD1_k127_6550294_8 membrane-bound lytic murein transglycosylase K08304 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003729 477.0
DYD1_k127_6550294_9 PhoH-like phosphate starvation-inducible protein K06217 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001425 463.0
DYD1_k127_6632667_0 Tripartite tricarboxylate transporter TctA family - - - 1.452e-206 662.0
DYD1_k127_6632667_1 LVIVD repeat - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002442 526.0
DYD1_k127_6632667_10 Maleate cis-trans isomerase K01799 - 5.2.1.1 0.000000008815 66.0
DYD1_k127_6632667_2 Oxidoreductase K10219 - 1.1.1.312 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008521 464.0
DYD1_k127_6632667_3 Polysaccharide deacetylase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001187 344.0
DYD1_k127_6632667_4 cobalamin synthesis protein - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002271 338.0
DYD1_k127_6632667_5 6-phosphogluconate dehydrogenase NAD-binding K08319 - 1.1.1.411 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000005143 297.0
DYD1_k127_6632667_6 Cupin 2, conserved barrel domain protein K11312 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000009536 286.0
DYD1_k127_6632667_7 LysR family - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000001351 279.0
DYD1_k127_6632667_8 oxidoreductase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000003643 270.0
DYD1_k127_6632667_9 Tripartite tricarboxylate transporter family receptor - - - 0.00000000000000000000000000000000000000000000000000000000000000000000054 256.0
DYD1_k127_6641439_0 protein conserved in bacteria - - - 0.00000000000000000000000000000000000000000000000000000000000000000007989 243.0
DYD1_k127_6641439_1 Isochorismatase family - - - 0.0000000000000000000000000000000000000000000001852 176.0
DYD1_k127_6641439_2 Glutathione S-transferase, N-terminal domain K01800 - 5.2.1.2 0.00000000000000000000000000000000000000001735 156.0
DYD1_k127_6641439_3 COG1638 TRAP-type C4-dicarboxylate transport system, periplasmic component K11688 - - 0.0000000000000000000000000000000000002459 153.0
DYD1_k127_6645526_0 alpha beta - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007864 435.0
DYD1_k127_6645526_1 Zinc-binding dehydrogenase K00344 - 1.6.5.5 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001283 343.0
DYD1_k127_6645526_2 Metallopeptidase family M24 - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000603 260.0
DYD1_k127_6645526_3 PQQ-like domain K17760 - 1.1.9.1 0.000000000000000000000000000000000000000000000000000000000000002242 221.0
DYD1_k127_6645526_4 NMT1-like family - - - 0.000000000000000000000000000000000000003501 165.0
DYD1_k127_6645526_5 belongs to the aldehyde dehydrogenase family - - - 0.0000000001408 74.0
DYD1_k127_669748_0 amino acids such as valine, to avoid such errors it has two additional distinct tRNA(Ile)-dependent editing activities. One activity is designated as 'pretransfer' editing and involves the hydrolysis of activated Val-AMP. The other activity is designated 'posttransfer' editing and involves deacylation of mischarged Val-tRNA(Ile) K01870 - 6.1.1.5 0.0 1299.0
DYD1_k127_669748_1 Neisseria PilC beta-propeller domain K02674 - - 0.0 1151.0
DYD1_k127_669748_10 Belongs to the ribF family K11753 - 2.7.1.26,2.7.7.2 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000337 408.0
DYD1_k127_669748_11 Bacterial extracellular solute-binding proteins, family 3 K02044 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008861 374.0
DYD1_k127_669748_12 Part of the ABC transporter complex PhnCDE involved in phosphonates import. Responsible for energy coupling to the transport system K02041 - 3.6.3.28 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002841 336.0
DYD1_k127_669748_13 PFAM Glutamine amidotransferase class-I K01951 - 6.3.5.2 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003089 302.0
DYD1_k127_669748_14 Binding-protein-dependent transport system inner membrane component K02042 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003765 303.0
DYD1_k127_669748_15 Binding-protein-dependent transport system inner membrane component K02042 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000004723 301.0
DYD1_k127_669748_16 Type IV Pilus-assembly protein W K02672 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000003763 288.0
DYD1_k127_669748_17 Type IV Pilus-assembly protein W K02672 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000002821 278.0
DYD1_k127_669748_18 Tetrapyrrole (Corrin/Porphyrin) Methylases K02303 - 2.1.1.107 0.0000000000000000000000000000000000000000000000000000000000000000001223 238.0
DYD1_k127_669748_19 Belongs to the UPF0234 family K09767 - - 0.000000000000000000000000000000000000000000000000000000000002289 224.0
DYD1_k127_669748_2 Neisseria PilC beta-propeller domain K02674 - - 1.779e-312 994.0
DYD1_k127_669748_20 Aspartyl protease K06985 - - 0.0000000000000000000000000000000000000000000000000000002119 207.0
DYD1_k127_669748_21 This protein specifically catalyzes the removal of signal peptides from prolipoproteins K03101 - 3.4.23.36 0.0000000000000000000000000000000000000000000000005157 179.0
DYD1_k127_669748_22 protein conserved in bacteria - - - 0.0000000000000000000000000000000000000000000001167 175.0
DYD1_k127_669748_23 Pilus assembly protein PilX - - - 0.00000000000000000000000000000000000000000005361 167.0
DYD1_k127_669748_24 Pilus assembly protein PilX - - - 0.0000000000000000000000000000000000000000006245 168.0
DYD1_k127_669748_25 type IV pilus modification protein PilV K02671 - - 0.000000000000000000000000000000000000004011 151.0
DYD1_k127_669748_26 Rdx family K07401 - - 0.0000000000000000000000000000000000008204 147.0
DYD1_k127_669748_27 type IV pilus modification protein PilV K02671 - - 0.0000000000000000000000000000000006691 138.0
DYD1_k127_669748_28 Type II transport protein GspH K08084 - - 0.00000000000000000000000000000001788 132.0
DYD1_k127_669748_29 Binds directly to 16S ribosomal RNA K02968 - - 0.0000000000000000000000001056 109.0
DYD1_k127_669748_3 Component of the sulfite reductase complex that catalyzes the 6-electron reduction of sulfite to sulfide. This is one of several activities required for the biosynthesis of L- cysteine from sulfate K00381,K00392 - 1.8.1.2,1.8.7.1 1.844e-252 790.0
DYD1_k127_669748_30 Prokaryotic N-terminal methylation motif K02655 - - 0.000000000000000000000101 107.0
DYD1_k127_669748_31 protein transport across the cell outer membrane K08084 - - 0.0000000000000000000008584 102.0
DYD1_k127_669748_32 TIGRFAM phosphate binding protein K02040 - - 0.000004853 51.0
DYD1_k127_669748_4 Involved in peptidoglycan biosynthesis. Transports lipid-linked peptidoglycan precursors from the inner to the outer leaflet of the cytoplasmic membrane K03980 - - 1.028e-224 707.0
DYD1_k127_669748_5 Belongs to the argininosuccinate synthase family. Type 1 subfamily K01940 - 6.3.4.5 2.617e-216 676.0
DYD1_k127_669748_6 PFAM Aminotransferase class-III K00821 - 2.6.1.11,2.6.1.17 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006798 556.0
DYD1_k127_669748_7 Reversibly catalyzes the transfer of the carbamoyl group from carbamoyl phosphate (CP) to the N(epsilon) atom of ornithine (ORN) to produce L-citrulline K00611 GO:0000050,GO:0003674,GO:0003824,GO:0004585,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006082,GO:0006520,GO:0006525,GO:0006526,GO:0006591,GO:0006807,GO:0008150,GO:0008152,GO:0008652,GO:0009058,GO:0009064,GO:0009084,GO:0009987,GO:0016053,GO:0016740,GO:0016741,GO:0016743,GO:0019627,GO:0019752,GO:0034641,GO:0042450,GO:0043436,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0044283,GO:0044424,GO:0044464,GO:0046394,GO:0071704,GO:0071941,GO:1901564,GO:1901566,GO:1901576,GO:1901605,GO:1901607 2.1.3.3 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003101 507.0
DYD1_k127_669748_8 Catalyzes the conversion of 1-hydroxy-2-methyl-2-(E)- butenyl 4-diphosphate (HMBPP) into a mixture of isopentenyl diphosphate (IPP) and dimethylallyl diphosphate (DMAPP). Acts in the terminal step of the DOXP MEP pathway for isoprenoid precursor biosynthesis K03527 - 1.17.7.4 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002678 473.0
DYD1_k127_669748_9 Bacterial regulatory helix-turn-helix protein, lysR family K13634 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004983 424.0
DYD1_k127_6721867_0 TRAP transporter, 4TM 12TM fusion protein - - - 6.831e-219 697.0
DYD1_k127_6721867_1 TRAP transporter, solute receptor (TAXI family K07080 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001504 392.0
DYD1_k127_6721867_10 Nitrile hydratase beta subunit K20807 - 4.2.1.84 0.000000000000009139 81.0
DYD1_k127_6721867_11 Cupin K01569 GO:0003674,GO:0003824,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006082,GO:0008150,GO:0008152,GO:0009987,GO:0016829,GO:0016830,GO:0016831,GO:0019752,GO:0033609,GO:0043436,GO:0043648,GO:0044237,GO:0044281,GO:0044424,GO:0044464,GO:0046564,GO:0071704 4.1.1.2 0.0005772 49.0
DYD1_k127_6721867_2 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003187 310.0
DYD1_k127_6721867_3 - - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000192 280.0
DYD1_k127_6721867_4 Ankyrin repeats (3 copies) K06867 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000004859 266.0
DYD1_k127_6721867_5 PFAM Nitrile hydratase alpha K01721,K20762 - 3.5.5.8,4.2.1.84 0.000000000000000000000000000000000000000000000000000000000000000000009417 249.0
DYD1_k127_6721867_6 Aldo/keto reductase family - - - 0.00000000000000000000000000000000000000000000000000000000000007061 218.0
DYD1_k127_6721867_7 Acetyltransferase (GNAT) domain K03823 - 2.3.1.183 0.0000000000000000000000000000000000000000000000002053 184.0
DYD1_k127_6721867_8 PFAM Taurine catabolism dioxygenase TauD, TfdA family K06912 - - 0.000000000000000000000000000000000000002582 158.0
DYD1_k127_6721867_9 Nitrile hydratase beta subunit K20807 - 4.2.1.84 0.000000000000000000000000000000000005059 140.0
DYD1_k127_6722384_0 Malic enzyme, NAD binding domain K00029 - 1.1.1.40 7.249e-263 818.0
DYD1_k127_6722384_1 Belongs to the TPP enzyme family K01576 - 4.1.1.7 8.054e-197 632.0
DYD1_k127_6722384_10 helix_turn_helix, Lux Regulon - - - 0.000000000007303 68.0
DYD1_k127_6722384_2 Transcriptional regulator - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002492 541.0
DYD1_k127_6722384_3 Transmembrane secretion effector - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001533 535.0
DYD1_k127_6722384_4 FAD binding domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002453 381.0
DYD1_k127_6722384_5 Belongs to the HpcH HpaI aldolase family K00979,K02510 - 2.7.7.38,4.1.2.52 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000001863 286.0
DYD1_k127_6722384_6 Belongs to the short-chain dehydrogenases reductases (SDR) family - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000002214 276.0
DYD1_k127_6722384_7 Alpha beta hydrolase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000003157 269.0
DYD1_k127_6722384_8 extracellular solute-binding protein, family 1 K22003 - 5.3.3.7 0.000000000000000000000000000000000000000000000000000000000000003427 225.0
DYD1_k127_6722384_9 Bacterial extracellular solute-binding protein K02020,K22003 - 5.3.3.7 0.000000000000000000000000000000000000000000000000000000000000834 218.0
DYD1_k127_6728281_0 FAD binding domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001438 586.0
DYD1_k127_6728281_1 Zinc-binding dehydrogenase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005749 413.0
DYD1_k127_6728281_2 Flavin-binding monooxygenase-like K07222 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002816 388.0
DYD1_k127_6728281_3 PFAM major facilitator superfamily MFS_1 - - - 0.00000000000000000000000000000000000000000000000000000000000001477 230.0
DYD1_k127_6728281_4 Response regulator, receiver - - - 0.000000000000000000000000000000000000000000000000000000000009101 216.0
DYD1_k127_6728281_5 Localisation of periplasmic protein complexes K01448 - 3.5.1.28 0.000000000000000000000000000000000000000000000000003607 189.0
DYD1_k127_6728281_6 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily K07032 - - 0.0000000000000000000000000000000000000005207 167.0
DYD1_k127_6728281_7 unsaturated fatty acid biosynthetic process K00508 GO:0001676,GO:0003674,GO:0003824,GO:0005575,GO:0005623,GO:0005886,GO:0006082,GO:0006629,GO:0006631,GO:0006633,GO:0008150,GO:0008152,GO:0008610,GO:0009058,GO:0009987,GO:0016020,GO:0016053,GO:0016213,GO:0016215,GO:0016491,GO:0016705,GO:0016717,GO:0019752,GO:0032787,GO:0042759,GO:0043436,GO:0044237,GO:0044238,GO:0044249,GO:0044255,GO:0044281,GO:0044283,GO:0044464,GO:0046394,GO:0055114,GO:0071704,GO:0071944,GO:0072330,GO:1901576 1.14.19.3 0.000000000000000000000000000000000001067 149.0
DYD1_k127_6728281_8 Pyridoxal-phosphate dependent enzyme K01754 - 4.3.1.19 0.0000000000000965 79.0
DYD1_k127_6728281_9 His Kinase A (phosphoacceptor) domain - - - 0.0000000001389 71.0
DYD1_k127_67438_0 belongs to the aldehyde dehydrogenase family K00135 - 1.2.1.16,1.2.1.20,1.2.1.79 6.785e-256 797.0
DYD1_k127_67438_1 Alanine-glyoxylate amino-transferase K00375,K05825 - - 8.481e-197 620.0
DYD1_k127_67438_10 - - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003365 381.0
DYD1_k127_67438_11 PFAM ABC transporter related K02049 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007101 375.0
DYD1_k127_67438_12 Taurine catabolism dioxygenase TauD, TfdA family K22303 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009846 371.0
DYD1_k127_67438_13 Dehydrogenase K15054 - 1.1.99.31 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001231 362.0
DYD1_k127_67438_14 Curli production assembly/transport component CsgG K06214 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003514 338.0
DYD1_k127_67438_15 Binding-protein-dependent transport system inner membrane component - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001234 334.0
DYD1_k127_67438_16 PFAM binding-protein-dependent transport systems inner membrane component K02050 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003712 316.0
DYD1_k127_67438_17 Adenylate and Guanylate cyclase catalytic domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000005731 304.0
DYD1_k127_67438_18 Function proposed based on presence of conserved amino acid motif, structural feature or limited homology K02051 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000702 298.0
DYD1_k127_67438_19 Major Facilitator Superfamily - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000189 288.0
DYD1_k127_67438_2 FAD binding domain K13796 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001054 590.0
DYD1_k127_67438_20 Antioxidant protein with alkyl hydroperoxidase activity. Required for the reduction of the AhpC active site cysteine residues and for the regeneration of the AhpC enzyme activity - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000007379 297.0
DYD1_k127_67438_21 major facilitator superfamily - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000003277 263.0
DYD1_k127_67438_22 VacJ family lipoprotein K04754 - - 0.000000000000000000000000000000000000000000000000000000000000000000000003043 254.0
DYD1_k127_67438_23 PFAM alkyl hydroperoxide reductase Thiol specific antioxidant Mal allergen K03564 - 1.11.1.15 0.000000000000000000000000000000000000000000000000000000009086 203.0
DYD1_k127_67438_24 Metallo-beta-lactamase superfamily - - - 0.0000000000000000000000000000000000000000000000000001301 188.0
DYD1_k127_67438_25 Putative molybdenum carrier - - - 0.00000000000000000000000000000000000000000000000002952 184.0
DYD1_k127_67438_26 Fatty acid hydroxylase superfamily - - - 0.00000000000000000000000000000000000000000000000005964 190.0
DYD1_k127_67438_27 Aldo/keto reductase family - - - 0.00000000000000000000000000000000000000000000192 180.0
DYD1_k127_67438_28 LuxR family transcriptional regulator K04333,K20918 - - 0.00000000000000000000000000000000000000000001249 172.0
DYD1_k127_67438_29 glyoxalase bleomycin resistance protein dioxygenase - - - 0.0000000000000000000000000000000000000000001383 163.0
DYD1_k127_67438_3 FAD binding domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007278 547.0
DYD1_k127_67438_31 Type VIII secretion system (T8SS), CsgF protein K04338 - - 0.00000000000000000000000000000000007114 138.0
DYD1_k127_67438_32 - - - - 0.00000000000000000000000000000000009238 139.0
DYD1_k127_67438_33 Belongs to the 'phage' integrase family - - - 0.0000000000000000000000000001492 118.0
DYD1_k127_67438_34 PFAM Curlin associated repeat protein - - - 0.00000000000000000000001628 113.0
DYD1_k127_67438_35 Phage integrase family K21039 - - 0.0000000000000000000000551 102.0
DYD1_k127_67438_36 (Lipo)protein - - - 0.00000000000000000001728 99.0
DYD1_k127_67438_37 (Lipo)protein - - - 0.0000000000000001368 86.0
DYD1_k127_67438_38 Curli assembly protein CsgE K04337 - - 0.0000000000000007782 83.0
DYD1_k127_67438_39 SmpA / OmlA family - - - 0.00000000000000395 83.0
DYD1_k127_67438_4 Mycolic acid cyclopropane synthetase K00574 - 2.1.1.79 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002401 500.0
DYD1_k127_67438_42 AMIN domain K02666 - - 0.00004835 51.0
DYD1_k127_67438_43 Curlin associated repeat - - - 0.00009075 51.0
DYD1_k127_67438_44 PilZ domain - - - 0.0003244 48.0
DYD1_k127_67438_5 Multicopper oxidase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002039 503.0
DYD1_k127_67438_6 PrpF protein - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005048 481.0
DYD1_k127_67438_7 Zn-dependent hydrolases of the beta-lactamase fold - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005025 449.0
DYD1_k127_67438_8 MmgE/PrpD family - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001337 419.0
DYD1_k127_67438_9 TGS domain K06944 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003148 395.0
DYD1_k127_6758800_0 DNA-binding domain of Proline dehydrogenase K13821 - 1.2.1.88,1.5.5.2 4.918e-294 936.0
DYD1_k127_6758800_1 Coenzyme A transferase K01027,K01029,K01032 - 2.8.3.5,2.8.3.6 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002054 546.0
DYD1_k127_6758800_10 - - - - 0.000000000000000004033 86.0
DYD1_k127_6758800_11 Transcriptional regulator - - - 0.00000004946 55.0
DYD1_k127_6758800_2 Alpha/beta hydrolase family - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003568 444.0
DYD1_k127_6758800_3 Belongs to the UPF0276 family K09930 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000499 406.0
DYD1_k127_6758800_4 Esterase of the alpha-beta hydrolase superfamily - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002681 359.0
DYD1_k127_6758800_5 Threonine aldolase K01620 - 4.1.2.48 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000007417 299.0
DYD1_k127_6758800_6 protein conserved in bacteria - - - 0.0000000000000000000000000000000000000000000000000000000000001501 227.0
DYD1_k127_6758800_7 Protein conserved in bacteria - - - 0.0000000000000000000000000000000000000000000000000000001745 208.0
DYD1_k127_6758800_8 Putative DNA-binding domain - - - 0.00000000000000000000000000000000000000000000000000006692 198.0
DYD1_k127_6758800_9 COG0006 Xaa-Pro aminopeptidase K01271 - 3.4.13.9 0.000000000000000000000000000000004495 142.0
DYD1_k127_6759980_0 Catalyzes the acyloin condensation reaction between C atoms 2 and 3 of pyruvate and glyceraldehyde 3-phosphate to yield 1-deoxy-D-xylulose-5-phosphate (DXP) K01662 - 2.2.1.7 6.071e-301 933.0
DYD1_k127_6759980_1 carnitine dehydratase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002059 562.0
DYD1_k127_6759980_2 Catalyzes the conversion of D-ribulose 5-phosphate to formate and 3,4-dihydroxy-2-butanone 4-phosphate K14652 - 3.5.4.25,4.1.99.12 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008449 462.0
DYD1_k127_6759980_3 GTP cyclohydrolase K01495 GO:0000166,GO:0001882,GO:0001883,GO:0003674,GO:0003824,GO:0003933,GO:0003934,GO:0005488,GO:0005525,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006066,GO:0006725,GO:0006729,GO:0006732,GO:0006807,GO:0008150,GO:0008152,GO:0008270,GO:0009058,GO:0009108,GO:0009987,GO:0016787,GO:0016810,GO:0016814,GO:0017076,GO:0017144,GO:0018130,GO:0019001,GO:0019238,GO:0019438,GO:0019751,GO:0032549,GO:0032550,GO:0032553,GO:0032555,GO:0032561,GO:0034311,GO:0034312,GO:0034641,GO:0035639,GO:0036094,GO:0042558,GO:0042559,GO:0043167,GO:0043168,GO:0043169,GO:0044237,GO:0044249,GO:0044271,GO:0044281,GO:0044283,GO:0044424,GO:0044464,GO:0046146,GO:0046165,GO:0046173,GO:0046483,GO:0046872,GO:0046914,GO:0051186,GO:0051188,GO:0071704,GO:0097159,GO:0097367,GO:1901265,GO:1901360,GO:1901362,GO:1901363,GO:1901564,GO:1901566,GO:1901576,GO:1901615,GO:1901617 3.5.4.16 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001367 314.0
DYD1_k127_6759980_4 Tripartite tricarboxylate transporter family receptor - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000004683 269.0
DYD1_k127_6759980_5 Short-chain dehydrogenase reductase sdr - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000003478 263.0
DYD1_k127_6759980_6 PBP superfamily domain K02040 - - 0.0000000000000000000000000000000000000000000000000000000000000008253 231.0
DYD1_k127_6759980_7 Tripartite tricarboxylate transporter family receptor - - - 0.000000000000000000000000000000000000000000000000000000000000001528 230.0
DYD1_k127_6759980_8 Asp-tRNAAsn Glu-tRNAGln amidotransferase A subunit and related amidases - - - 0.00002999 51.0
DYD1_k127_6760148_0 TonB dependent receptor K02014 - - 8.524e-218 696.0
DYD1_k127_6760148_1 Secreted protein, containing von Willebrand factor (VWF) type - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006032 324.0
DYD1_k127_6760148_2 von Willebrand factor (VWF) type A domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000008054 255.0
DYD1_k127_6760148_3 PFAM extracellular solute-binding protein family 3 K02030,K09969,K10001 - - 0.0000000000000000000000000000000000000000000000000000000002684 214.0
DYD1_k127_6760148_4 TIGRFAM 3-hydroxybutyrate dehydrogenase K00019 - 1.1.1.30 0.000000000000000000000000000000000000000000000000003666 183.0
DYD1_k127_6761658_0 Phosphate acyltransferases K05939 - 2.3.1.40,6.2.1.20 1.845e-236 751.0
DYD1_k127_6761658_1 Diguanylate cyclase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004681 357.0
DYD1_k127_6761658_2 Cytochrome c - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000001295 292.0
DYD1_k127_6761658_3 Enoyl-CoA hydratase K13816 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000235 263.0
DYD1_k127_6761658_4 Hydrolyzes cAMP to 5'-AMP. Plays an important regulatory role in modulating the intracellular concentration of cAMP, thereby influencing cAMP-dependent processes K03651 - 3.1.4.53 0.0000000000000000000000000000000000000000000000000000000000000000000000001682 258.0
DYD1_k127_6761658_5 Class I peptide chain release factor K15034 GO:0003674,GO:0003676,GO:0003723,GO:0003747,GO:0003824,GO:0004045,GO:0005488,GO:0006412,GO:0006414,GO:0006415,GO:0006417,GO:0006518,GO:0006807,GO:0008079,GO:0008135,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009889,GO:0009987,GO:0010467,GO:0010468,GO:0010556,GO:0010608,GO:0016043,GO:0016150,GO:0016787,GO:0016788,GO:0019222,GO:0019538,GO:0022411,GO:0031323,GO:0031326,GO:0032268,GO:0032984,GO:0034248,GO:0034641,GO:0034645,GO:0043021,GO:0043022,GO:0043043,GO:0043170,GO:0043603,GO:0043604,GO:0043624,GO:0043933,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044877,GO:0050789,GO:0050794,GO:0051171,GO:0051246,GO:0052689,GO:0060255,GO:0065007,GO:0071704,GO:0071840,GO:0072344,GO:0080090,GO:0097159,GO:0140098,GO:0140101,GO:1901363,GO:1901564,GO:1901566,GO:1901576,GO:2000112 - 0.00000000000000000000000000000000000000000000002891 173.0
DYD1_k127_6761658_6 Dodecin K09165 - - 0.000000000000000000004285 106.0
DYD1_k127_6761658_7 COG3909 Cytochrome c556 - - - 0.0000000001133 68.0
DYD1_k127_6820333_0 ATP-dependent serine protease that mediates the selective degradation of mutant and abnormal proteins as well as certain short-lived regulatory proteins. Required for cellular homeostasis and for survival from DNA damage and developmental changes induced by stress. Degrades polypeptides processively to yield small peptide fragments that are 5 to 10 amino acids long. Binds to DNA in a double-stranded, site-specific manner K01338 - 3.4.21.53 0.0 1263.0
DYD1_k127_6820333_1 ATP-dependent specificity component of the Clp protease. It directs the protease to specific substrates. Can perform chaperone functions in the absence of ClpP K03544 - - 3.757e-231 720.0
DYD1_k127_6820333_10 Histone-like DNA-binding protein which is capable of wrapping DNA to stabilize it, and thus to prevent its denaturation under extreme environmental conditions K03530 - - 0.000000000000000000000000000006723 125.0
DYD1_k127_6820333_11 - - - - 0.000000003351 60.0
DYD1_k127_6820333_2 Involved in protein export. Acts as a chaperone by maintaining the newly synthesized protein in an open conformation. Functions as a peptidyl-prolyl cis-trans isomerase K03545 GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0044424,GO:0044464 - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001568 514.0
DYD1_k127_6820333_3 Protein conserved in bacteria K16514 - 5.3.2.8 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006772 428.0
DYD1_k127_6820333_4 Squalene/phytoene synthase K02291 - 2.5.1.32,2.5.1.99 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002715 413.0
DYD1_k127_6820333_5 Cleaves peptides in various proteins in a process that requires ATP hydrolysis. Has a chymotrypsin-like activity. Plays a major role in the degradation of misfolded proteins K01358 - 3.4.21.92 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009246 346.0
DYD1_k127_6820333_6 Enoyl-(Acyl carrier protein) reductase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008239 334.0
DYD1_k127_6820333_7 phytoene synthase K02291 - 2.5.1.32,2.5.1.99 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002151 327.0
DYD1_k127_6820333_8 squalene-associated FAD-dependent desaturase K21677 - 1.17.8.1 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000006199 310.0
DYD1_k127_6820333_9 peptidylprolyl isomerase K03770 - 5.2.1.8 0.00000000000000000000000000000000000000000000000000000000000000000000000005367 260.0
DYD1_k127_6833822_0 Component of the pyruvate dehydrogenase (PDH) complex, that catalyzes the overall conversion of pyruvate to acetyl-CoA and CO(2) K00163 - 1.2.4.1 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001003 463.0
DYD1_k127_6833822_1 LysR substrate binding domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001198 308.0
DYD1_k127_6833822_2 PFAM aminotransferase, class I - - - 0.00000000000000000000000000000000000000000000000000000000000000000002141 242.0
DYD1_k127_6833822_3 PFAM regulatory protein AsnC Lrp family K03719 GO:0001101,GO:0003674,GO:0003676,GO:0003677,GO:0003700,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006355,GO:0008150,GO:0009889,GO:0010033,GO:0010243,GO:0010468,GO:0010556,GO:0019219,GO:0019222,GO:0031323,GO:0031326,GO:0042221,GO:0043200,GO:0043565,GO:0044424,GO:0044444,GO:0044464,GO:0050789,GO:0050794,GO:0050896,GO:0051171,GO:0051252,GO:0060255,GO:0065007,GO:0080090,GO:0097159,GO:0140110,GO:1901363,GO:1901698,GO:1901700,GO:1903506,GO:2000112,GO:2001141 - 0.0000000000000000000000000000000000000000000000000000000000002904 215.0
DYD1_k127_6833822_4 Domain present in PSD-95, Dlg, and ZO-1/2. - - - 0.00000000000000000000000000000000000000000000000005371 180.0
DYD1_k127_6833822_5 membrane K15977 - - 0.00000000000000000000000000000001737 136.0
DYD1_k127_714084_0 acetyl-coa acetyltransferase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006544 563.0
DYD1_k127_714084_1 COG1042 Acyl-CoA synthetase (NDP forming) - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006467 552.0
DYD1_k127_714084_2 SelR domain K07305 - 1.8.4.12 0.000000000000000000000000000000000000000000000000000000000000000000000006259 248.0
DYD1_k127_714084_3 Enoyl-CoA hydratase/isomerase K15866 - 5.3.3.18 0.000000000000000000000000000000000000000000000000000000000000000000000358 246.0
DYD1_k127_714084_4 Rubredoxin-like zinc ribbon domain (DUF35_N) K07068 - - 0.0000000000000000000000000000000002676 138.0
DYD1_k127_714084_5 Dehydrogenase - - - 0.0000000000000000000000000000002382 123.0
DYD1_k127_714084_6 Belongs to the sodium solute symporter (SSF) (TC 2.A.21) family - - - 0.000000000000000000000000156 112.0
DYD1_k127_73567_0 Required for chromosome condensation and partitioning K03529 - - 0.0 1083.0
DYD1_k127_73567_1 Modifies, by uridylylation and deuridylylation, the PII regulatory proteins (GlnB and homologs), in response to the nitrogen status of the cell that GlnD senses through the glutamine level. Under low glutamine levels, catalyzes the conversion of the PII proteins and UTP to PII-UMP and PPi, while under higher glutamine levels, GlnD hydrolyzes PII-UMP to PII and UMP (deuridylylation). Thus, controls uridylylation state and activity of the PII proteins, and plays an important role in the regulation of nitrogen K00990 - 2.7.7.59 9.919e-312 977.0
DYD1_k127_73567_10 Catalyzes the condensation of isopentenyl diphosphate (IPP) with allylic pyrophosphates generating different type of terpenoids K00806 - 2.5.1.31 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003576 368.0
DYD1_k127_73567_11 Purine nucleoside phosphorylase which is highly specific for 6-oxopurine nucleosides. Cleaves guanosine or inosine to respective bases and sugar-1-phosphate molecules. Involved in purine salvage K00772,K03815 - 2.4.2.28 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001967 360.0
DYD1_k127_73567_12 Responsible for the release of ribosomes from messenger RNA at the termination of protein biosynthesis. May increase the efficiency of translation by recycling ribosomes from one round of translation to another K02838 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000004638 273.0
DYD1_k127_73567_13 Removes the formyl group from the N-terminal Met of newly synthesized proteins. Requires at least a dipeptide for an efficient rate of reaction. N-terminal L-methionine is a prerequisite for activity but the enzyme has broad specificity at other positions - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000002657 270.0
DYD1_k127_73567_14 Essential cell division protein that stabilizes the FtsZ protofilaments by cross-linking them and that serves as a cytoplasmic membrane anchor for the Z ring. Also required for the recruitment to the septal ring of downstream cell division proteins - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000189 258.0
DYD1_k127_73567_15 Phosphoribosyl transferase domain K00760 - 2.4.2.8 0.000000000000000000000000000000000000000000000000000000000000002236 222.0
DYD1_k127_73567_16 Belongs to the CDS family K00981 - 2.7.7.41 0.000000000000000000000000000000000000000000000000000000000000003595 226.0
DYD1_k127_73567_17 DsrE/DsrF-like family - - - 0.0000000000000000000000000000000000000000000000000000000000001966 213.0
DYD1_k127_73567_18 protein involved in outer membrane biogenesis K07289,K07290 - - 0.000000000000001428 91.0
DYD1_k127_73567_2 DNA ligase that catalyzes the formation of phosphodiester linkages between 5'-phosphoryl and 3'-hydroxyl groups in double-stranded DNA using NAD as a coenzyme and as the energy source for the reaction. It is essential for DNA replication and repair of damaged DNA K01972 - 6.5.1.2 4.695e-271 849.0
DYD1_k127_73567_3 zinc metalloprotease K11749 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001811 549.0
DYD1_k127_73567_4 Catalyzes the NADP-dependent rearrangement and reduction of 1-deoxy-D-xylulose-5-phosphate (DXP) to 2-C-methyl-D-erythritol 4-phosphate (MEP) K00099 - 1.1.1.267 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001952 491.0
DYD1_k127_73567_5 Methionine aminopeptidase K01265 GO:0003674,GO:0003824,GO:0004177,GO:0005488,GO:0005506,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006464,GO:0006508,GO:0006807,GO:0008150,GO:0008152,GO:0008198,GO:0008233,GO:0008235,GO:0008237,GO:0008238,GO:0009987,GO:0016787,GO:0019538,GO:0036211,GO:0043167,GO:0043169,GO:0043170,GO:0043412,GO:0044237,GO:0044238,GO:0044260,GO:0044267,GO:0044424,GO:0044444,GO:0044464,GO:0046872,GO:0046914,GO:0070006,GO:0070011,GO:0070084,GO:0071704,GO:0140096,GO:1901564 3.4.11.18 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003482 435.0
DYD1_k127_73567_6 Belongs to the universal ribosomal protein uS2 family K02967 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002126 404.0
DYD1_k127_73567_7 UTP-glucose-1-phosphate uridylyltransferase K00963 - 2.7.7.9 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003154 400.0
DYD1_k127_73567_8 Associates with the EF-Tu.GDP complex and induces the exchange of GDP to GTP. It remains bound to the aminoacyl-tRNA.EF- Tu.GTP complex up to the GTP hydrolysis stage on the ribosome K02357 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003727 398.0
DYD1_k127_73567_9 Catalyzes the reversible phosphorylation of UMP to UDP K09903 - 2.7.4.22 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000011 392.0
DYD1_k127_795629_0 TIGRFAM Acetolactate synthase, large subunit, biosynthetic K01652 - 2.2.1.6 8.82e-319 981.0
DYD1_k127_795629_1 Presumably involved in the processing and regular turnover of intracellular proteins. Catalyzes the removal of unsubstituted N-terminal amino acids from various peptides K01255 GO:0003674,GO:0003824,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005739,GO:0006508,GO:0006807,GO:0008150,GO:0008152,GO:0008233,GO:0016787,GO:0019538,GO:0019904,GO:0043170,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0044238,GO:0044424,GO:0044444,GO:0044464,GO:0071704,GO:0097718,GO:0140096,GO:1901564 3.4.11.1 8.497e-209 659.0
DYD1_k127_795629_10 dna polymerase III (Chi subunit) K02339 - 2.7.7.7 0.000000000000000000000000000000000000000000000000002766 186.0
DYD1_k127_795629_11 RDD family - - - 0.000000000000000000000000000002595 125.0
DYD1_k127_795629_12 Catalyzes the condensation of the acetyl group of acetyl-CoA with 3-methyl-2-oxobutanoate (2-oxoisovalerate) to form 3-carboxy-3-hydroxy-4-methylpentanoate (2-isopropylmalate) K01649 - 2.3.3.13 0.0000000000000000000000000009088 114.0
DYD1_k127_795629_13 Protein of unknown function (DUF3106) - - - 0.000000000000000000000000597 110.0
DYD1_k127_795629_14 Protein of unknown function (DUF3619) - - - 0.00000000000008009 76.0
DYD1_k127_795629_2 Involved in the biosynthesis of branched-chain amino acids (BCAA). Catalyzes an alkyl-migration followed by a ketol- acid reduction of (S)-2-acetolactate (S2AL) to yield (R)-2,3- dihydroxy-isovalerate. In the isomerase reaction, S2AL is rearranged via a Mg-dependent methyl migration to produce 3- hydroxy-3-methyl-2-ketobutyrate (HMKB). In the reductase reaction, this 2-ketoacid undergoes a metal-dependent reduction by NADPH to yield (R)-2,3-dihydroxy-isovalerate K00053 - 1.1.1.86 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000248 541.0
DYD1_k127_795629_3 Permease, YjgP YjgQ family K11720 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002346 422.0
DYD1_k127_795629_4 amino acids such as threonine, to avoid such errors, it has a posttransfer editing activity that hydrolyzes mischarged Thr-tRNA(Val) in a tRNA-dependent manner K01873 - 6.1.1.9 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005495 397.0
DYD1_k127_795629_5 PFAM permease YjgP YjgQ family protein K07091 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000309 385.0
DYD1_k127_795629_6 Belongs to the CDP-alcohol phosphatidyltransferase class-I family K17103 - 2.7.8.8 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002166 338.0
DYD1_k127_795629_7 Catalyzes the formation of phosphatidylethanolamine (PtdEtn) from phosphatidylserine (PtdSer) K01613 - 4.1.1.65 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006158 304.0
DYD1_k127_795629_8 ACT domain K01653 GO:0003674,GO:0003824,GO:0003984,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005948,GO:0006082,GO:0006520,GO:0006549,GO:0006573,GO:0006807,GO:0008150,GO:0008152,GO:0008652,GO:0009058,GO:0009081,GO:0009082,GO:0009097,GO:0009099,GO:0009987,GO:0016053,GO:0016740,GO:0016744,GO:0019752,GO:0032991,GO:0043436,GO:0044237,GO:0044238,GO:0044249,GO:0044281,GO:0044283,GO:0044424,GO:0044444,GO:0044464,GO:0046394,GO:0071704,GO:1901564,GO:1901566,GO:1901576,GO:1901605,GO:1901607,GO:1902494,GO:1990234 2.2.1.6 0.00000000000000000000000000000000000000000000000000000000000000000000000000000004759 272.0
DYD1_k127_795629_9 TIGRFAM RNA polymerase sigma factor, sigma-70 family K03088 - - 0.000000000000000000000000000000000000000000000000000000000000000000002205 239.0
DYD1_k127_877375_0 Acyl-CoA synthetase (AMP-forming) AMP-acid ligase II K00666 - - 3.354e-250 782.0
DYD1_k127_877375_1 Acyl-CoA dehydrogenase, C-terminal domain - - - 6.158e-212 672.0
DYD1_k127_877375_10 MmgE PrpD family protein - - - 0.00004633 46.0
DYD1_k127_877375_2 MmgE PrpD family protein - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001389 422.0
DYD1_k127_877375_3 Catalyzes the condensation of (S)-aspartate-beta- semialdehyde (S)-ASA and pyruvate to 4-hydroxy- tetrahydrodipicolinate (HTPA) K01714,K21062 - 3.5.4.22,4.3.3.7 0.000000000000000000000000000000000000000000000000000000000000000000000000004036 263.0
DYD1_k127_877375_4 Short-chain dehydrogenase reductase sdr - - - 0.000000000000000000000000000000000000000000000000000000000000001576 228.0
DYD1_k127_877375_5 Glutathione S-transferase, C-terminal domain - - - 0.00000000000000000000000000000000000000000000000000000008026 201.0
DYD1_k127_877375_6 HNH nucleases - - - 0.0000000000000000000000000000000000000000000002513 171.0
DYD1_k127_877375_7 GYD domain - - - 0.000000000000000000000000000001967 123.0
DYD1_k127_877375_8 Dihydrodipicolinate synthetase family K01714 - 4.3.3.7 0.000000000000000000000000001335 124.0
DYD1_k127_877375_9 oxidation-reduction process - - - 0.000000000000000006325 85.0
DYD1_k127_87867_0 Cation transport ATPase (P-type) - - - 0.0 1029.0
DYD1_k127_87867_1 X-Pro dipeptidyl-peptidase C-terminal non-catalytic domain K06978 - - 3.666e-244 777.0
DYD1_k127_87867_10 Bacterial extracellular solute-binding protein, family 7 - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004592 398.0
DYD1_k127_87867_11 Elongator protein 3, MiaB family, Radical SAM - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004906 381.0
DYD1_k127_87867_12 FecCD transport family K02015 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001159 343.0
DYD1_k127_87867_13 luciferase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003016 340.0
DYD1_k127_87867_14 TIGRFAM HAD-superfamily hydrolase, subfamily IB (PSPase-like) - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002429 330.0
DYD1_k127_87867_15 Belongs to the UPF0758 family K03630 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003469 307.0
DYD1_k127_87867_16 protocatechuate 3,4-dioxygenase, beta subunit' K03381 - 1.13.11.1 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000669 329.0
DYD1_k127_87867_17 Catalyzes the transfer of a formyl group from 10- formyltetrahydrofolate to 5-phospho-ribosyl-glycinamide (GAR), producing 5-phospho-ribosyl-N-formylglycinamide (FGAR) and tetrahydrofolate K11175 - 2.1.2.2 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000001534 284.0
DYD1_k127_87867_18 protein-L-isoaspartate O-methyltransferase K00573 - 2.1.1.77 0.000000000000000000000000000000000000000000000000000000000000000000000000000000002803 278.0
DYD1_k127_87867_19 Methyltransferase domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000001371 240.0
DYD1_k127_87867_2 Protein of unknown function (DUF4080) - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005832 608.0
DYD1_k127_87867_20 Urate oxidase N-terminal - - - 0.00000000000000000000000000000000000000000000000000000000000000000007397 234.0
DYD1_k127_87867_21 Domain of unknown function (DUF2520) - - - 0.0000000000000000000000000000000000000000000000000000000000000000004844 243.0
DYD1_k127_87867_22 ABC transporter K02013 - 3.6.3.34 0.00000000000000000000000000000000000000000000000000000000000000001367 234.0
DYD1_k127_87867_23 Belongs to the DnaA family K10763 - - 0.00000000000000000000000000000000000000000000000000000000004836 212.0
DYD1_k127_87867_24 Phospholipid N-methyltransferase - - - 0.000000000000000000000000000000000000000000000000001517 192.0
DYD1_k127_87867_25 S4 RNA-binding domain - - - 0.00000000000000000000000000000000000000004179 156.0
DYD1_k127_87867_26 Uncharacterized ACR, COG1430 K09005 - - 0.0000000000000000000000000000000000001549 146.0
DYD1_k127_87867_27 Belongs to the bacterial ribosomal protein bL28 family K02902 - - 0.00000000000000000000000000000000004488 135.0
DYD1_k127_87867_28 This enzyme is involved in nucleotide metabolism it produces dUMP, the immediate precursor of thymidine nucleotides and it decreases the intracellular concentration of dUTP so that uracil cannot be incorporated into DNA K01520 - 3.6.1.23 0.0000000000000000000000000000000002954 134.0
DYD1_k127_87867_29 OsmC-like protein - - - 0.000000000000000000000000000000000453 136.0
DYD1_k127_87867_3 fatty acid desaturase K00507 - 1.14.19.1 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000392 573.0
DYD1_k127_87867_30 NMT1-like family K02051,K15553 - - 0.000000000000000000000000000000004542 141.0
DYD1_k127_87867_31 Protein of unknown function (DUF3108) - - - 0.0000000000000000000000000000002055 137.0
DYD1_k127_87867_32 CbiX K03795 - 4.99.1.3 0.0000000000000000000000000000005391 126.0
DYD1_k127_87867_33 Tripartite ATP-independent periplasmic transporters, DctQ component - - - 0.0000000000000000000000000002233 130.0
DYD1_k127_87867_34 - - - - 0.0000000000000000000000000003421 130.0
DYD1_k127_87867_35 Glycine-zipper domain - - - 0.0000000000000000000000000009478 117.0
DYD1_k127_87867_36 - - - - 0.0000000000000000000000009243 106.0
DYD1_k127_87867_37 Belongs to the bacterial ribosomal protein bL33 family K02913 - - 0.000000000000000000002695 93.0
DYD1_k127_87867_38 - - - - 0.000000008896 66.0
DYD1_k127_87867_4 PhoD-like phosphatase, N-terminal domain K01113 - 3.1.3.1 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004056 552.0
DYD1_k127_87867_40 Phosphate starvation-inducible protein, PSIF - - - 0.00008467 50.0
DYD1_k127_87867_5 Belongs to the class I-like SAM-binding methyltransferase superfamily. RsmB NOP family K03500 GO:0000154,GO:0001510,GO:0003674,GO:0003824,GO:0005575,GO:0005622,GO:0005623,GO:0005634,GO:0005730,GO:0006139,GO:0006364,GO:0006396,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0008168,GO:0008173,GO:0008757,GO:0009451,GO:0009987,GO:0010467,GO:0016070,GO:0016072,GO:0016740,GO:0016741,GO:0022613,GO:0031167,GO:0031974,GO:0031981,GO:0032259,GO:0034470,GO:0034641,GO:0034660,GO:0042254,GO:0043170,GO:0043226,GO:0043227,GO:0043228,GO:0043229,GO:0043231,GO:0043232,GO:0043233,GO:0043412,GO:0043414,GO:0044085,GO:0044237,GO:0044238,GO:0044260,GO:0044422,GO:0044424,GO:0044428,GO:0044446,GO:0044464,GO:0046483,GO:0070013,GO:0070475,GO:0071704,GO:0071840,GO:0090304,GO:0140098,GO:1901360 2.1.1.176 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004186 509.0
DYD1_k127_87867_6 Catalyzes two steps in the biosynthesis of coenzyme A. In the first step cysteine is conjugated to 4'-phosphopantothenate to form 4-phosphopantothenoylcysteine, in the latter compound is decarboxylated to form 4'-phosphopantotheine K13038 - 4.1.1.36,6.3.2.5 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003184 498.0
DYD1_k127_87867_7 COG1593 TRAP-type C4-dicarboxylate transport system, large permease component - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001153 479.0
DYD1_k127_87867_8 AIR synthase related protein, N-terminal domain K01933 - 6.3.3.1 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000462 486.0
DYD1_k127_87867_9 PFAM histone deacetylase superfamily K04768 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008029 407.0
DYD1_k127_88895_0 Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family K00836 - 2.6.1.76 1.335e-199 630.0
DYD1_k127_88895_1 serine protease K07403 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004019 479.0
DYD1_k127_88895_10 L-2,4-diaminobutyric acid acetyltransferase K06718 - 2.3.1.178 0.00000000000000000000000000000000000000000000001414 179.0
DYD1_k127_88895_11 ABC transporter K02028 - 3.6.3.21 0.00000000000000000000000000000000000008396 147.0
DYD1_k127_88895_2 Ectoine hydroxylase K10674 GO:0003674,GO:0003824,GO:0005488,GO:0005506,GO:0006082,GO:0006807,GO:0008150,GO:0008152,GO:0009056,GO:0009987,GO:0016054,GO:0016491,GO:0016705,GO:0016706,GO:0019752,GO:0032787,GO:0042399,GO:0042400,GO:0043167,GO:0043169,GO:0043436,GO:0044237,GO:0044248,GO:0044281,GO:0044282,GO:0046395,GO:0046483,GO:0046700,GO:0046872,GO:0046914,GO:0051213,GO:0055114,GO:0071704,GO:0072329,GO:1901360,GO:1901361,GO:1901564,GO:1901565,GO:1901575 1.14.11.55 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002812 382.0
DYD1_k127_88895_3 PFAM band 7 protein - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007699 374.0
DYD1_k127_88895_4 PFAM Extracellular solute-binding protein, family 3 K02030 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001277 351.0
DYD1_k127_88895_5 ABC-type amino acid transport system permease component K02029 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000005587 297.0
DYD1_k127_88895_6 ABC transporter permease K02029 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000002702 264.0
DYD1_k127_88895_7 Peptidase C26 K07010 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000009588 259.0
DYD1_k127_88895_8 Catalyzes the circularization of gamma-N-acetyl- alpha,gamma-diaminobutyric acid (ADABA) to ectoine (1,4,5,6- tetrahydro-2-methyl-4-pyrimidine carboxylic acid), which is an excellent osmoprotectant K06720 - 4.2.1.108 0.00000000000000000000000000000000000000000000000000000000002407 209.0
DYD1_k127_88895_9 transcriptional - - - 0.000000000000000000000000000000000000000000000000005563 188.0
DYD1_k127_88920_0 Malate/L-lactate dehydrogenase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007101 439.0
DYD1_k127_88920_1 CoA-transferase family III - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000119 417.0
DYD1_k127_88920_2 response regulator K02481,K07714,K07715 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001223 415.0
DYD1_k127_88920_3 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain K07711 - 2.7.13.3 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002981 419.0
DYD1_k127_88920_4 PFAM Peptidase family M28 - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007767 357.0
DYD1_k127_88920_5 Sigma-54 interaction domain K07715 - - 0.0000000000000000000000000000000000000000000000001666 181.0
DYD1_k127_88920_6 toluene tolerance family protein K07323 - - 0.0000000000000000000000000000000000000000299 163.0
DYD1_k127_88920_7 PFAM Glyoxalase bleomycin resistance protein dioxygenase K05606 - 5.1.99.1 0.0000000000000000000000000000000007753 138.0
DYD1_k127_900967_0 Aldehyde dehydrogenase family K00128 - 1.2.1.3 1.556e-231 726.0
DYD1_k127_900967_1 Acyl-CoA dehydrogenase, C-terminal domain K00249 - 1.3.8.7 3.729e-205 653.0
DYD1_k127_900967_10 Tripartite tricarboxylate transporter family receptor - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001307 323.0
DYD1_k127_900967_11 HxlR-like helix-turn-helix - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000721 284.0
DYD1_k127_900967_12 MmgE PrpD family protein - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000005686 278.0
DYD1_k127_900967_13 Serine aminopeptidase, S33 - - - 0.000000000000000000000000000000000000000000000000000000000001805 219.0
DYD1_k127_900967_14 - K11477 - - 0.00000000000000000000000000000000000000000000000000000000004098 209.0
DYD1_k127_900967_15 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain - - - 0.0000000000000000000000000000000000000000000000000000000001749 210.0
DYD1_k127_900967_16 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain - - - 0.0000000000000000000000000000000000000000000000000000000009362 206.0
DYD1_k127_900967_17 Bacterial extracellular solute-binding protein K02020 - - 0.0000000000000000000000000000000000000001219 159.0
DYD1_k127_900967_18 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily K01759 - 4.4.1.5 0.0000000000000000000000000000000000002401 145.0
DYD1_k127_900967_19 Putative prokaryotic signal transducing protein - - - 0.0000000000000000002444 94.0
DYD1_k127_900967_2 Tripartite tricarboxylate transporter TctA family - - - 2.369e-200 635.0
DYD1_k127_900967_20 Protein of unknown function (DUF3012) - - - 0.00000000000000005529 86.0
DYD1_k127_900967_22 Protein of unknown function (DUF3500) - - - 0.0000000000003729 76.0
DYD1_k127_900967_23 Tripartite tricarboxylate transporter TctB family - - - 0.0001474 50.0
DYD1_k127_900967_24 Protein of unknown function (DUF3500) - - - 0.0001663 49.0
DYD1_k127_900967_3 Mandelate racemase / muconate lactonizing enzyme, C-terminal domain - - - 5.93e-197 619.0
DYD1_k127_900967_4 Tripartite tricarboxylate transporter TctA family - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003227 599.0
DYD1_k127_900967_5 CoA-transferase family III - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005825 519.0
DYD1_k127_900967_6 Oxidoreductase family, C-terminal alpha/beta domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000669 484.0
DYD1_k127_900967_7 NADH flavin - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003073 466.0
DYD1_k127_900967_8 Isocitrate/isopropylmalate dehydrogenase K00031,K00052,K07246 - 1.1.1.42,1.1.1.83,1.1.1.85,1.1.1.93,4.1.1.73 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009416 446.0
DYD1_k127_900967_9 Tripartite tricarboxylate transporter family receptor - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003122 344.0
DYD1_k127_906899_0 Gamma-glutamyltranspeptidase K00681 - 2.3.2.2,3.4.19.13 2.111e-214 677.0
DYD1_k127_906899_1 Part of the tripartite ATP-independent periplasmic (TRAP) transport system - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002271 610.0
DYD1_k127_906899_2 PFAM TRAP C4-dicarboxylate transport system permease DctM subunit - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005352 602.0
DYD1_k127_906899_3 Peptidase family M48 - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000227 543.0
DYD1_k127_906899_4 4-amino-4-deoxy-L-arabinose transferase and related glycosyltransferases of PMT family - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007754 389.0
DYD1_k127_906899_5 Tripartite ATP-independent periplasmic transporters, DctQ component - - - 0.00000000000000000000000000000000000000000000001843 177.0
DYD1_k127_906899_6 Binds the 23S rRNA K02909 - - 0.0000000000000000000000004971 105.0
DYD1_k127_914721_0 lactoylglutathione lyase activity - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000001869 271.0
DYD1_k127_914721_1 TIGRFAM acetolactate synthase, large subunit, biosynthetic type K01652 - 2.2.1.6 0.000000000000000000000000000000000000000000000000000000000000000000000001358 267.0
DYD1_k127_914721_2 membrane transporter protein K07090 - - 0.00000000000000000000000000000000002513 148.0
DYD1_k127_914721_3 succinylglutamate desuccinylase K06987 - - 0.00000000000000000000000000000001745 139.0
DYD1_k127_914721_4 Dienelactone hydrolase family K01061 - 3.1.1.45 0.0000000000003052 73.0
DYD1_k127_928535_0 DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates K03043 - 2.7.7.6 0.0 2286.0
DYD1_k127_928535_1 DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates K03046 - 2.7.7.6 0.0 1790.0
DYD1_k127_928535_2 Participates in transcription elongation, termination and antitermination K02601 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000508 328.0
DYD1_k127_928535_3 Binds directly to 23S rRNA. The L1 stalk is quite mobile in the ribosome, and is involved in E site tRNA release K02863 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006945 337.0
DYD1_k127_928535_4 Forms part of the ribosomal stalk which helps the ribosome interact with GTP-bound translation factors K02867 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000004824 250.0
DYD1_k127_928535_5 Forms part of the ribosomal stalk, playing a central role in the interaction of the ribosome with GTP-bound translation factors K02864 - - 0.000000000000000000000000000000000000000000000000000000000000000000000001138 248.0
DYD1_k127_928535_6 Forms part of the ribosomal stalk which helps the ribosome interact with GTP-bound translation factors. Is thus essential for accurate translation K02935 - - 0.00000000000000000000000000000000000000000000000002203 181.0
DYD1_k127_928535_7 Protein of unknown function (DUF1549) - - - 0.000000000000000000000000000000000000021 148.0
DYD1_k127_928535_8 Essential subunit of the Sec protein translocation channel SecYEG. Clamps together the 2 halves of SecY. May contact the channel plug during translocation K03073 - - 0.00000000000000000000000000000000004486 139.0
DYD1_k127_928535_9 Essential subunit of the Sec protein translocation channel SecYEG. Clamps together the 2 halves of SecY. May contact the channel plug during translocation K03073 - - 0.00003292 49.0
DYD1_k127_947271_0 Molybdopterin oxidoreductase Fe4S4 domain K00336 - 1.6.5.3 2.113e-315 982.0
DYD1_k127_947271_1 chain 5 L K00341 - 1.6.5.3 1.569e-295 919.0
DYD1_k127_947271_2 TIGRFAM proton-translocating NADH-quinone oxidoreductase, chain M K00342 - 1.6.5.3 6.441e-236 737.0
DYD1_k127_947271_3 NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient K00343 - 1.6.5.3 5.082e-198 627.0
DYD1_k127_947271_4 NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient. This subunit may bind ubiquinone K00337 - 1.6.5.3 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001972 489.0
DYD1_k127_947271_5 NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient K00338 - 1.6.5.3 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000001665 300.0
DYD1_k127_947271_6 NADH-ubiquinone/plastoquinone oxidoreductase chain 6 K00339 - 1.6.5.3 0.00000000000000000000000000000000000000000000000000000000000000000000000000000202 267.0
DYD1_k127_947271_7 NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient K00340 - 1.6.5.3 0.00000000000000000000000000000000000000000554 163.0
DYD1_k127_947271_8 NUDIX domain K01515 - 3.6.1.13 0.0000000000004318 78.0
DYD1_k127_94969_0 Couples transcription and DNA repair by recognizing RNA polymerase (RNAP) stalled at DNA lesions. Mediates ATP-dependent release of RNAP and its truncated transcript from the DNA, and recruitment of nucleotide excision repair machinery to the damaged site K03723 - - 5.215e-237 740.0
DYD1_k127_94969_1 MMPL family - - - 2.172e-219 712.0
DYD1_k127_94969_10 Peptidase M48 - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001864 314.0
DYD1_k127_94969_11 Polysaccharide deacetylase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000001418 304.0
DYD1_k127_94969_12 Bacterial lipid A biosynthesis acyltransferase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000001154 302.0
DYD1_k127_94969_13 Scaffold protein Nfu/NifU N terminal - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000001449 278.0
DYD1_k127_94969_14 Beta-ketoacyl synthase, N-terminal domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000001617 278.0
DYD1_k127_94969_15 pteridine-dependent deoxygenase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000007878 267.0
DYD1_k127_94969_16 Glycosyl Transferase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000009108 252.0
DYD1_k127_94969_17 NifU-like N terminal domain K04488 - - 0.0000000000000000000000000000000000000000000000000000000000000000006199 238.0
DYD1_k127_94969_18 - - - - 0.00000000000000000000000000000000000000000000000000000000000003709 226.0
DYD1_k127_94969_19 Specifically methylates the adenine in position 37 of tRNA(1)(Val) (anticodon cmo5UAC) K00571 - 2.1.1.72 0.00000000000000000000000000000000000000000000000000001329 197.0
DYD1_k127_94969_2 Catalyzes the removal of elemental sulfur and selenium atoms from L-cysteine, L-cystine, L-selenocysteine, and L- selenocystine to produce L-alanine K11717 - 2.8.1.7,4.4.1.16 2.061e-202 638.0
DYD1_k127_94969_20 Electron transfer DM13 - - - 0.000000000000000000000000000000000000000000000003571 177.0
DYD1_k127_94969_21 Rieske-like [2Fe-2S] domain K05710,K18087 - - 0.0000000000000000000000000000000000000000000006848 167.0
DYD1_k127_94969_22 Participates in the translocation of lipoproteins from the inner membrane to the outer membrane. Only forms a complex with a lipoprotein if the residue after the N-terminal Cys is not an aspartate (The Asp acts as a targeting signal to indicate that the lipoprotein should stay in the inner membrane) - - - 0.0000000000000000000000000000000000000000003771 167.0
DYD1_k127_94969_23 dehydratase - - - 0.0000000000000000000000000000000000000005166 154.0
DYD1_k127_94969_24 - - - - 0.000000000000000000000000000000008808 135.0
DYD1_k127_94969_25 membrane - - - 0.000000000000000000000000000005462 127.0
DYD1_k127_94969_26 Phosphopantetheine attachment site K02078 - - 0.00000000000000000000000001573 113.0
DYD1_k127_94969_27 cytochrome - - - 0.00000000000000002543 91.0
DYD1_k127_94969_28 FabA-like domain - - - 0.0000000000001091 79.0
DYD1_k127_94969_29 - - - - 0.0000000000005553 73.0
DYD1_k127_94969_3 Protein of unknown function (DUF1015) - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000834 595.0
DYD1_k127_94969_4 fad dependent oxidoreductase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005748 539.0
DYD1_k127_94969_5 Beta-ketoacyl synthase, C-terminal domain K00647,K09458 - 2.3.1.179,2.3.1.41 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007321 511.0
DYD1_k127_94969_6 AMP-binding enzyme - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002516 472.0
DYD1_k127_94969_7 Uncharacterized protein family (UPF0051) K09015 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000784 425.0
DYD1_k127_94969_8 Peptidase family M48 - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007569 353.0
DYD1_k127_94969_9 membrane-bound metal-dependent K07038 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004017 340.0
DYD1_k127_95390_0 Proton pump that utilizes the energy of pyrophosphate hydrolysis as the driving force for proton movement across the membrane. Generates a proton motive force K15987 - 3.6.1.1 1.118e-319 990.0
DYD1_k127_95390_1 The transhydrogenation between NADH and NADP is coupled to respiration and ATP hydrolysis and functions as a proton pump across the membrane K00325 - 1.6.1.2 2.471e-258 801.0
DYD1_k127_95390_10 Bidirectionally degrades single-stranded DNA into large acid-insoluble oligonucleotides, which are then degraded further into small acid-soluble oligonucleotides K03601 - 3.1.11.6 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000859 477.0
DYD1_k127_95390_11 Catalyzes the transfer of a dimethylallyl group onto the adenine at position 37 in tRNAs that read codons beginning with uridine, leading to the formation of N6-(dimethylallyl)adenosine (i(6)A) K00791 - 2.5.1.75 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003282 399.0
DYD1_k127_95390_12 Transfers the gamma-phosphate of ATP to the 4'-position of a tetraacyldisaccharide 1-phosphate intermediate (termed DS-1- P) to form tetraacyldisaccharide 1,4'-bis-phosphate (lipid IVA) K00912 - 2.7.1.130 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001383 342.0
DYD1_k127_95390_13 HpcH/HpaI aldolase/citrate lyase family - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001875 323.0
DYD1_k127_95390_14 Catalyzes the reversible transfer of the terminal phosphate group between ATP and AMP. Plays an important role in cellular energy homeostasis and in adenine nucleotide metabolism K00939 - 2.7.4.3 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003874 316.0
DYD1_k127_95390_15 Activates KDO (a required 8-carbon sugar) for incorporation into bacterial lipopolysaccharide in Gram-negative bacteria K00979 - 2.7.7.38 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002489 304.0
DYD1_k127_95390_16 glyoxalase bleomycin resistance protein dioxygenase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000003333 305.0
DYD1_k127_95390_17 PFAM MotA TolQ ExbB proton channel K03561 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000008638 290.0
DYD1_k127_95390_18 ATPase MipZ K03496 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000003541 285.0
DYD1_k127_95390_19 Tripartite tricarboxylate transporter family receptor - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000524 284.0
DYD1_k127_95390_2 The transhydrogenation between NADH and NADP is coupled to respiration and ATP hydrolysis and functions as a proton pump across the membrane K00324 - 1.6.1.2 7.782e-256 797.0
DYD1_k127_95390_20 TRAP-type C4-dicarboxylate transport system, large permease K11690 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000009869 276.0
DYD1_k127_95390_21 SelR domain K07305 - 1.8.4.12 0.00000000000000000000000000000000000000000000000000000000000000000000000007317 252.0
DYD1_k127_95390_22 Major Facilitator Superfamily - - - 0.00000000000000000000000000000000000000000000000000000000000000000001679 249.0
DYD1_k127_95390_23 Protein of unknown function (DUF3047) - - - 0.00000000000000000000000000000000000000000000000000000000000000006206 230.0
DYD1_k127_95390_24 Bacterial transferase hexapeptide (six repeats) - - - 0.00000000000000000000000000000000000000000000000000000000000001055 221.0
DYD1_k127_95390_25 cyclic nucleotide binding K01420 - - 0.00000000000000000000000000000000000000000000000000002128 198.0
DYD1_k127_95390_26 Threonylcarbamoyl adenosine biosynthesis protein TsaE K06925 - - 0.0000000000000000000000000000000000000000000000538 187.0
DYD1_k127_95390_27 biopolymer transport K03559 - - 0.000000000000000000000000000000000000000001036 161.0
DYD1_k127_95390_28 Staphylococcal nuclease homologues - - - 0.0000000000000000000000000000000000002571 147.0
DYD1_k127_95390_29 Acetyltransferase (GNAT) domain - - - 0.000000000000000000000000000000004646 133.0
DYD1_k127_95390_3 Key enzyme in the regulation of glycerol uptake and metabolism. Catalyzes the phosphorylation of glycerol to yield sn- glycerol 3-phosphate K00864 GO:0003674,GO:0003824,GO:0004370,GO:0005975,GO:0006066,GO:0006071,GO:0006793,GO:0006796,GO:0008150,GO:0008152,GO:0009987,GO:0016301,GO:0016310,GO:0016740,GO:0016772,GO:0016773,GO:0019400,GO:0019751,GO:0044237,GO:0044238,GO:0044262,GO:0044281,GO:0071704,GO:1901615 2.7.1.30 1.142e-225 707.0
DYD1_k127_95390_30 Belongs to the UPF0434 family K09791 - - 0.00000000000000000000002493 109.0
DYD1_k127_95390_31 Bacterial extracellular solute-binding protein, family 7 K21395 - - 0.00000000000003712 84.0
DYD1_k127_95390_33 - - - - 0.000000001146 69.0
DYD1_k127_95390_34 Major Facilitator Superfamily - - - 0.000000002311 61.0
DYD1_k127_95390_35 PFAM Tripartite ATP-independent periplasmic K11689 - - 0.0000006632 58.0
DYD1_k127_95390_4 This protein is involved in the repair of mismatches in DNA. It is required for dam-dependent methyl-directed DNA mismatch repair. May act as a molecular matchmaker , a protein that promotes the formation of a stable complex between two or more DNA-binding proteins in an ATP-dependent manner without itself being part of a final effector complex K03572 - - 1.919e-220 698.0
DYD1_k127_95390_5 Catalyzes the phosphorylation of D-fructose 6-phosphate, the first committing step of glycolysis. Uses inorganic phosphate (PPi) as phosphoryl donor instead of ATP like common ATP-dependent phosphofructokinases (ATP-PFKs), which renders the reaction reversible, and can thus function both in glycolysis and gluconeogenesis. Consistently, PPi-PFK can replace the enzymes of both the forward (ATP-PFK) and reverse (fructose-bisphosphatase (FBPase)) reactions K21071 - 2.7.1.11,2.7.1.90 1.209e-205 646.0
DYD1_k127_95390_6 Sodium:solute symporter family - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003388 583.0
DYD1_k127_95390_7 Catalyzes the conversion of epoxyqueuosine (oQ) to queuosine (Q), which is a hypermodified base found in the wobble positions of tRNA(Asp), tRNA(Asn), tRNA(His) and tRNA(Tyr) K18979 GO:0003674,GO:0003824,GO:0006139,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0008616,GO:0009058,GO:0009116,GO:0009119,GO:0009163,GO:0009987,GO:0016491,GO:0018130,GO:0019438,GO:0034404,GO:0034641,GO:0034654,GO:0042455,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0044283,GO:0046116,GO:0046483,GO:0052693,GO:0055086,GO:0055114,GO:0071704,GO:1901135,GO:1901137,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576,GO:1901657,GO:1901659 1.17.99.6 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001311 542.0
DYD1_k127_95390_8 N-Acetylmuramoyl-L-alanine amidase K01448 - 3.5.1.28 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002454 516.0
DYD1_k127_95390_9 Thiolase, C-terminal domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003194 485.0
DYD1_k127_971088_0 Belongs to the monovalent cation proton antiporter 2 (CPA2) transporter (TC 2.A.37) family K03455 - - 9.359e-248 783.0
DYD1_k127_971088_1 Belongs to the SIS family. GutQ KpsF subfamily K06041 - 5.3.1.13 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006348 422.0
DYD1_k127_971088_2 Branched-chain amino acid ATP-binding cassette transporter K06861 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002319 386.0
DYD1_k127_971088_3 Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released K03092 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003122 334.0
DYD1_k127_971088_4 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase, YrbI family K03270 - 3.1.3.45 0.00000000000000000000000000000000000000000000000000000003233 201.0
DYD1_k127_971088_5 Involved in the assembly of lipopolysaccharide (LPS). Required for the translocation of LPS from the inner membrane to the outer membrane K09774 - - 0.00000000000000000000000000000000000000000000000000005651 194.0
DYD1_k127_971088_6 protein conserved in bacteria K11719 - - 0.0000000000000000000000000000000000000000000249 171.0
DYD1_k127_973307_0 Catalyzes the reversible interconversion of serine and glycine with tetrahydrofolate (THF) serving as the one-carbon carrier. This reaction serves as the major source of one-carbon groups required for the biosynthesis of purines, thymidylate, methionine, and other important biomolecules. Also exhibits THF- independent aldolase activity toward beta-hydroxyamino acids, producing glycine and aldehydes, via a retro-aldol mechanism K00600 - 2.1.2.1 7.653e-196 617.0
DYD1_k127_973307_1 COG4664 TRAP-type mannitol chloroaromatic compound transport system, large permease component - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003052 563.0
DYD1_k127_973307_10 Negatively regulates transcription of bacterial ribonucleotide reductase nrd genes and operons by binding to NrdR- boxes K07738 - - 0.000000000000000000000000000000000000000000000000000000000000000006707 229.0
DYD1_k127_973307_11 Lumazine binding domain K00793 - 2.5.1.9 0.000000000000000000000000000000000000000000000000000000000000008835 224.0
DYD1_k127_973307_12 Lipid phosphatase which dephosphorylates phosphatidylglycerophosphate (PGP) to phosphatidylglycerol (PG) K01095 - 3.1.3.27 0.00000000000000000000000000000000000000000000000000000000000544 211.0
DYD1_k127_973307_13 Belongs to the CinA family K03743 - 3.5.1.42 0.00000000000000000000000000000000000000000000000000000000004895 211.0
DYD1_k127_973307_14 TRAP-type mannitol chloroaromatic compound transport system, small permease component - - - 0.000000000000000000000000000000000000000000000000000000005471 205.0
DYD1_k127_973307_15 Involved in transcription antitermination. Required for transcription of ribosomal RNA (rRNA) genes. Binds specifically to the boxA antiterminator sequence of the ribosomal RNA (rrn) operons K03625 GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006139,GO:0006351,GO:0006353,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0016070,GO:0018130,GO:0019438,GO:0032774,GO:0034641,GO:0034645,GO:0034654,GO:0043170,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044271,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0071704,GO:0090304,GO:0097659,GO:1901360,GO:1901362,GO:1901576 - 0.00000000000000000000000000000000008571 137.0
DYD1_k127_973307_16 PFAM peptidase U62 modulator of DNA gyrase K03592 - - 0.00000000000006282 71.0
DYD1_k127_973307_2 Converts 2,5-diamino-6-(ribosylamino)-4(3h)-pyrimidinone 5'-phosphate into 5-amino-6-(ribosylamino)-2,4(1h,3h)- pyrimidinedione 5'-phosphate K11752 - 1.1.1.193,3.5.4.26 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001379 505.0
DYD1_k127_973307_3 Part of the tripartite ATP-independent periplasmic (TRAP) transport system - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003478 499.0
DYD1_k127_973307_4 Catalyzes the conversion of D-ribulose 5-phosphate to formate and 3,4-dihydroxy-2-butanone 4-phosphate K14652 - 3.5.4.25,4.1.99.12 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003882 488.0
DYD1_k127_973307_5 Dehydrogenase K00020,K00042 - 1.1.1.31,1.1.1.60 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003951 407.0
DYD1_k127_973307_6 AIR synthase related protein, N-terminal domain K00946 - 2.7.4.16 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005496 326.0
DYD1_k127_973307_7 Can catalyze the hydrolysis of ATP in the presence of single-stranded DNA, the ATP-dependent uptake of single-stranded DNA by duplex DNA, and the ATP-dependent hybridization of homologous single-stranded DNAs. It interacts with LexA causing its activation and leading to its autocatalytic cleavage K03553 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000005076 263.0
DYD1_k127_973307_8 Protein of unknown function (DUF938) - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000001287 253.0
DYD1_k127_973307_9 Catalyzes the formation of 6,7-dimethyl-8- ribityllumazine by condensation of 5-amino-6-(D- ribitylamino)uracil with 3,4-dihydroxy-2-butanone 4-phosphate. This is the penultimate step in the biosynthesis of riboflavin K00794 - 2.5.1.78 0.0000000000000000000000000000000000000000000000000000000000000000002967 231.0
DYD1_k127_98904_0 tRNA synthetases class I (E and Q), catalytic domain K01885 - 6.1.1.17 3.891e-194 616.0
DYD1_k127_98904_1 Gamma-glutamyltranspeptidase K00681 - 2.3.2.2,3.4.19.13 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006813 505.0
DYD1_k127_98904_2 Polysaccharide deacetylase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001177 387.0
DYD1_k127_98904_3 FAD dependent oxidoreductase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003171 372.0
DYD1_k127_98904_4 Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family K02005 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006291 310.0
DYD1_k127_98904_5 Oxidoreductase family, C-terminal alpha/beta domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000008599 301.0