DYD2_k127_1034762_0
The UvrABC repair system catalyzes the recognition and processing of DNA lesions. UvrA is an ATPase and a DNA-binding protein. A damage recognition complex composed of 2 UvrA and 2 UvrB subunits scans DNA for abnormalities. When the presence of a lesion has been verified by UvrB, the UvrA molecules dissociate
K03701
-
-
0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008253
518.0
View
DYD2_k127_1034762_1
ABC transporter transmembrane region
K06147
-
-
0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001478
446.0
View
DYD2_k127_1034762_2
Belongs to the UPF0176 family
K07146
-
-
0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000001598
303.0
View
DYD2_k127_1034762_3
The UvrABC repair system catalyzes the recognition and processing of DNA lesions. UvrC both incises the 5' and 3' sides of the lesion. The N-terminal half is responsible for the 3' incision and the C-terminal half is responsible for the 5' incision
K03703
-
-
0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000001272
308.0
View
DYD2_k127_1034762_4
Belongs to the peptidase M24B family
K01262
-
3.4.11.9
0.00000000000000000000000000000000000000000000000000000000000008078
228.0
View
DYD2_k127_1034762_5
SNARE associated Golgi protein
K03975
-
-
0.00000000000000000000000000000000000000000000000000000002702
203.0
View
DYD2_k127_1034762_6
dipeptide transport
K02035
-
-
0.000000000000000000000000000000000000000000000000000001485
213.0
View
DYD2_k127_1034762_7
This is one of the proteins that binds to the 5S RNA in the ribosome where it forms part of the central protuberance
K02897
-
-
0.00000000000000000003923
98.0
View
DYD2_k127_1034762_9
Membrane
K08972
-
-
0.0005371
47.0
View
DYD2_k127_1138901_0
amino acids such as threonine, to avoid such errors, it has a posttransfer editing activity that hydrolyzes mischarged Thr-tRNA(Val) in a tRNA-dependent manner
K01873
-
6.1.1.9
1.64e-204
665.0
View
DYD2_k127_1138901_1
Amidinotransferase
-
-
-
0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006852
384.0
View
DYD2_k127_1138901_10
transcriptional regulator
-
-
-
0.000003469
58.0
View
DYD2_k127_1138901_11
endonuclease exonuclease phosphatase
K07004
-
-
0.00002415
57.0
View
DYD2_k127_1138901_12
alginic acid biosynthetic process
K10297
-
-
0.00002703
46.0
View
DYD2_k127_1138901_13
hydrolase (HAD superfamily)
K01560
-
3.8.1.2
0.00008252
53.0
View
DYD2_k127_1138901_2
Required for the formation of a threonylcarbamoyl group on adenosine at position 37 (t(6)A37) in tRNAs that read codons beginning with adenine. Is involved in the transfer of the threonylcarbamoyl moiety of threonylcarbamoyl-AMP (TC-AMP) to the N6 group of A37, together with TsaE and TsaB. TsaD likely plays a direct catalytic role in this reaction
K01409
-
2.3.1.234
0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001276
316.0
View
DYD2_k127_1138901_3
acid to the nucleotide precursor UDP-N-acetylmuramoyl-L-alanyl-D-glutamate (UMAG) in the biosynthesis of bacterial cell-wall peptidoglycan
K01928,K15792
-
6.3.2.10,6.3.2.13
0.000000000000000000000000000000000000000000000000000000000000000000000000000000000001307
296.0
View
DYD2_k127_1138901_4
PIN domain
-
-
-
0.00000000000000000000000000000008123
128.0
View
DYD2_k127_1138901_5
Belongs to the LOG family
K06966
-
3.2.2.10
0.0000000000000000000000000001659
123.0
View
DYD2_k127_1138901_6
Domain of unknown function (DUF1905)
-
-
-
0.0000000000000000000000000002526
115.0
View
DYD2_k127_1138901_8
NUDIX domain
K03574
-
3.6.1.55
0.0000002489
58.0
View
DYD2_k127_1138901_9
Resolvase, N terminal domain
-
-
-
0.0000006188
53.0
View
DYD2_k127_1180960_0
ATPase, P-type (transporting), HAD superfamily, subfamily IC
K01537
-
3.6.3.8
5.112e-197
645.0
View
DYD2_k127_1180960_1
Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain
-
-
-
0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004481
313.0
View
DYD2_k127_1180960_2
PFAM cytochrome c biogenesis protein, transmembrane region
-
-
-
0.000000000000000000000002713
111.0
View
DYD2_k127_1180960_3
hydrolase of the HAD superfamily
K07015
-
-
0.000000000001398
80.0
View
DYD2_k127_1180960_4
ATP cone domain
-
-
-
0.000009638
51.0
View
DYD2_k127_1198522_0
GlcNAc-PI de-N-acetylase
-
-
-
0.00000000000000000000000000000000000000000000005029
178.0
View
DYD2_k127_1198522_1
membrane
-
-
-
0.000000000000000000000000000000000000000002592
162.0
View
DYD2_k127_1198522_2
An RNase that has 5'-3' exonuclease and possibly endonuclease activity. Involved in maturation of rRNA and in some organisms also mRNA maturation and or decay
K12574
-
-
0.00000000000000000000000000000000000007338
151.0
View
DYD2_k127_1198522_3
Dolichol kinase
K18678
GO:0003674,GO:0003824,GO:0006066,GO:0006629,GO:0006720,GO:0006721,GO:0006766,GO:0006775,GO:0006793,GO:0006796,GO:0008150,GO:0008152,GO:0009058,GO:0009110,GO:0009987,GO:0010189,GO:0010276,GO:0016101,GO:0016301,GO:0016310,GO:0016740,GO:0016772,GO:0017144,GO:0018130,GO:0033306,GO:0034308,GO:0042360,GO:0042362,GO:0044237,GO:0044238,GO:0044249,GO:0044255,GO:0044281,GO:0044283,GO:0046483,GO:0071704,GO:1901360,GO:1901362,GO:1901576,GO:1901615,GO:1901617,GO:1903173
2.7.1.182
0.00000000000111
76.0
View
DYD2_k127_1245102_0
The central subunit of the protein translocation channel SecYEG. Consists of two halves formed by TMs 1-5 and 6-10. These two domains form a lateral gate at the front which open onto the bilayer between TMs 2 and 7, and are clamped together by SecE at the back. The channel is closed by both a pore ring composed of hydrophobic SecY resides and a short helix (helix 2A) on the extracellular side of the membrane which forms a plug. The plug probably moves laterally to allow the channel to open. The ring and the pore may move independently
K03076
GO:0005575,GO:0005576,GO:0005623,GO:0005886,GO:0008150,GO:0016020,GO:0040007,GO:0044464,GO:0071944
-
0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000001446
301.0
View
DYD2_k127_1245102_1
Binds the lower part of the 30S subunit head. Binds mRNA in the 70S ribosome, positioning it for translation
K02982
-
-
0.0000000000000000000000000000000000000000000000000000000000000002446
226.0
View
DYD2_k127_1245102_10
One of the proteins that surrounds the polypeptide exit tunnel on the outside of the subunit
K02895
GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0006412,GO:0006518,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0015934,GO:0019538,GO:0022625,GO:0022626,GO:0032991,GO:0034641,GO:0034645,GO:0043043,GO:0043170,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:0071704,GO:1901564,GO:1901566,GO:1901576,GO:1990904
-
0.0000000000000000000000000001168
120.0
View
DYD2_k127_1245102_11
This is one of the proteins that binds and probably mediates the attachment of the 5S RNA into the large ribosomal subunit, where it forms part of the central protuberance
K02881
GO:0003674,GO:0003676,GO:0003723,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0008097,GO:0015934,GO:0019843,GO:0022625,GO:0022626,GO:0032991,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:0097159,GO:1901363,GO:1990904
-
0.00000000000000000000000000697
113.0
View
DYD2_k127_1245102_12
The globular domain of the protein is located near the polypeptide exit tunnel on the outside of the subunit, while an extended beta-hairpin is found that lines the wall of the exit tunnel in the center of the 70S ribosome
K02890
GO:0003674,GO:0003735,GO:0005198,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0015934,GO:0022625,GO:0022626,GO:0032991,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:1990904
-
0.0000000000000000000000001425
109.0
View
DYD2_k127_1245102_13
One of the primary rRNA binding proteins, it binds specifically to the 5'-end of 16S ribosomal RNA
K02961
-
-
0.000000000000000000009366
96.0
View
DYD2_k127_1245102_14
binds to the 23S rRNA
K02876
GO:0003674,GO:0003735,GO:0005198,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0015934,GO:0022625,GO:0022626,GO:0032991,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:1990904
-
0.0000000000000000000281
96.0
View
DYD2_k127_1245102_15
Belongs to the universal ribosomal protein uL29 family
K02904
GO:0000027,GO:0003674,GO:0003735,GO:0005198,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0006412,GO:0006518,GO:0006807,GO:0006996,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0015934,GO:0016043,GO:0019538,GO:0022607,GO:0022613,GO:0022618,GO:0022625,GO:0022626,GO:0032991,GO:0034622,GO:0034641,GO:0034645,GO:0040007,GO:0042254,GO:0042255,GO:0042273,GO:0043043,GO:0043170,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043603,GO:0043604,GO:0043933,GO:0044085,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:0065003,GO:0070925,GO:0071704,GO:0071826,GO:0071840,GO:1901564,GO:1901566,GO:1901576,GO:1990904
-
0.000007308
50.0
View
DYD2_k127_1245102_2
This protein binds to the 23S rRNA, and is important in its secondary structure. It is located near the subunit interface in the base of the L7 L12 stalk, and near the tRNA binding site of the peptidyltransferase center
K02933
GO:0002181,GO:0003674,GO:0003676,GO:0003723,GO:0003735,GO:0005198,GO:0005488,GO:0005575,GO:0005618,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0005886,GO:0006412,GO:0006518,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0015934,GO:0016020,GO:0019538,GO:0022625,GO:0022626,GO:0030312,GO:0032991,GO:0034641,GO:0034645,GO:0040007,GO:0043043,GO:0043170,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:0071704,GO:0071944,GO:0097159,GO:1901363,GO:1901564,GO:1901566,GO:1901576,GO:1990904
-
0.0000000000000000000000000000000000000000000000000000000001102
208.0
View
DYD2_k127_1245102_3
Binds 23S rRNA and is also seen to make contacts with the A and possibly P site tRNAs
K02878
GO:0003674,GO:0003676,GO:0003723,GO:0003735,GO:0005198,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0015934,GO:0019843,GO:0022625,GO:0022626,GO:0032991,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:0097159,GO:1901363,GO:1990904
-
0.00000000000000000000000000000000000000000000000000001302
191.0
View
DYD2_k127_1245102_4
This is 1 of the proteins that binds and probably mediates the attachment of the 5S RNA into the large ribosomal subunit, where it forms part of the central protuberance. In the 70S ribosome it contacts protein S13 of the 30S subunit (bridge B1b), connecting the 2 subunits
K02931
-
-
0.00000000000000000000000000000000000000000000000000002464
193.0
View
DYD2_k127_1245102_5
Binds to 23S rRNA. Forms part of two intersubunit bridges in the 70S ribosome
K02874
-
-
0.00000000000000000000000000000000000000000000000002885
181.0
View
DYD2_k127_1245102_6
Located at the back of the 30S subunit body where it stabilizes the conformation of the head with respect to the body
K02988
GO:0003674,GO:0003735,GO:0005198,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0006412,GO:0006518,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0015935,GO:0019538,GO:0022626,GO:0022627,GO:0032991,GO:0034641,GO:0034645,GO:0043043,GO:0043170,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:0071704,GO:1901564,GO:1901566,GO:1901576,GO:1990904
-
0.00000000000000000000000000000000000000003334
158.0
View
DYD2_k127_1245102_7
Protein S19 forms a complex with S13 that binds strongly to the 16S ribosomal RNA
K02965
GO:0000028,GO:0003674,GO:0003735,GO:0005198,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0006996,GO:0008150,GO:0009987,GO:0015935,GO:0016043,GO:0022607,GO:0022613,GO:0022618,GO:0022626,GO:0022627,GO:0032991,GO:0034622,GO:0042254,GO:0042255,GO:0042274,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043933,GO:0044085,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:0065003,GO:0070925,GO:0071826,GO:0071840,GO:1990904
-
0.00000000000000000000000000000000004844
135.0
View
DYD2_k127_1245102_8
Binds 16S rRNA, required for the assembly of 30S particles and may also be responsible for determining the conformation of the 16S rRNA at the A site
K02954
GO:0003674,GO:0003735,GO:0005198,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005840,GO:0006412,GO:0006518,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0015935,GO:0019538,GO:0032991,GO:0034641,GO:0034645,GO:0043043,GO:0043170,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044446,GO:0044464,GO:0071704,GO:1901564,GO:1901566,GO:1901576,GO:1990904
-
0.00000000000000000000000000000002595
127.0
View
DYD2_k127_1245102_9
One of the primary rRNA binding proteins, it binds directly to 16S rRNA central domain where it helps coordinate assembly of the platform of the 30S subunit
K02994
-
-
0.00000000000000000000000000006884
119.0
View
DYD2_k127_1519850_0
Myo-inositol-1-phosphate synthase
K01858
GO:0003674,GO:0003824,GO:0004512,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006790,GO:0008150,GO:0008152,GO:0008270,GO:0009058,GO:0009405,GO:0009987,GO:0010125,GO:0010126,GO:0016137,GO:0016138,GO:0016853,GO:0016872,GO:0043167,GO:0043169,GO:0044237,GO:0044249,GO:0044272,GO:0044419,GO:0044424,GO:0044444,GO:0044464,GO:0046872,GO:0046914,GO:0051186,GO:0051188,GO:0051704,GO:0071704,GO:1901135,GO:1901137,GO:1901576,GO:1901657,GO:1901659
5.5.1.4
0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001643
505.0
View
DYD2_k127_1519850_1
Catalyzes the conversion of glucosamine-6-phosphate to glucosamine-1-phosphate
K03431
-
5.4.2.10
0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005643
353.0
View
DYD2_k127_1519850_2
Belongs to the RNA methyltransferase TrmD family
K00554
GO:0001510,GO:0003674,GO:0003824,GO:0006139,GO:0006396,GO:0006399,GO:0006400,GO:0006725,GO:0006807,GO:0008033,GO:0008150,GO:0008152,GO:0008168,GO:0008173,GO:0008175,GO:0008757,GO:0009019,GO:0009451,GO:0009987,GO:0010467,GO:0016070,GO:0016423,GO:0016740,GO:0016741,GO:0016772,GO:0016779,GO:0030488,GO:0032259,GO:0034470,GO:0034641,GO:0034660,GO:0043170,GO:0043412,GO:0043414,GO:0044237,GO:0044238,GO:0044260,GO:0046483,GO:0050518,GO:0070567,GO:0071704,GO:0090304,GO:0140098,GO:0140101,GO:1901360
2.1.1.228
0.0000000000000000000000000000000000000000000000000000000000000000000000003771
252.0
View
DYD2_k127_1519850_3
Nickel-containing superoxide dismutase
K00518
-
1.15.1.1
0.0000000000000000000000000000000003807
135.0
View
DYD2_k127_1519850_4
ABC1 family
K03688
-
-
0.0000000000000000000000000000009815
138.0
View
DYD2_k127_1519850_5
PFAM LysR substrate-binding protein, regulatory protein LysR
-
-
-
0.0000000000000000000004358
107.0
View
DYD2_k127_1519850_6
Transglycosylase associated protein
-
-
-
0.0000009429
53.0
View
DYD2_k127_1519850_7
Belongs to the peptidase S26 family
K03100
-
3.4.21.89
0.00002038
50.0
View
DYD2_k127_162491_0
TIGRFAM haloacid dehalogenase superfamily, subfamily IA, variant 3 with third motif having DD or ED
K19270
-
3.1.3.23
0.0000000000000000000000000000000000000000000000006059
180.0
View
DYD2_k127_162491_2
AAA-like domain
-
-
-
0.000377
53.0
View
DYD2_k127_1740592_0
Involved in mRNA degradation. Catalyzes the phosphorolysis of single-stranded polyribonucleotides processively in the 3'- to 5'-direction
K00962
-
2.7.7.8
2.044e-210
676.0
View
DYD2_k127_1740592_1
In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity
K02335
GO:0003674,GO:0003824,GO:0003887,GO:0004518,GO:0004527,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006139,GO:0006259,GO:0006260,GO:0006261,GO:0006281,GO:0006725,GO:0006807,GO:0006950,GO:0006974,GO:0008150,GO:0008152,GO:0008409,GO:0009058,GO:0009059,GO:0009987,GO:0016740,GO:0016772,GO:0016779,GO:0016787,GO:0016788,GO:0018130,GO:0019438,GO:0033554,GO:0034061,GO:0034641,GO:0034645,GO:0034654,GO:0043170,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044271,GO:0044424,GO:0044464,GO:0046483,GO:0050896,GO:0051716,GO:0071704,GO:0071897,GO:0090304,GO:0090305,GO:0140097,GO:1901360,GO:1901362,GO:1901576
2.7.7.7
0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003386
565.0
View
DYD2_k127_1740592_10
ATPase that binds to both the 70S ribosome and the 50S ribosomal subunit in a nucleotide-independent manner
K06942
-
-
0.0000000000000000000000000000000000000002199
151.0
View
DYD2_k127_1740592_11
Single-stranded DNA-binding protein
K03111
-
-
0.0000000000000000000000000002129
119.0
View
DYD2_k127_1740592_12
23S rRNA-intervening sequence protein
-
-
-
0.0000000000000000000000000002571
117.0
View
DYD2_k127_1740592_13
DNA polymerase III
K02340
-
2.7.7.7
0.0000000000000000000001386
108.0
View
DYD2_k127_1740592_14
One of the primary rRNA binding proteins, it binds directly to 16S rRNA where it helps nucleate assembly of the platform of the 30S subunit by binding and bridging several RNA helices of the 16S rRNA
K02956
-
-
0.0000000000000000000002603
98.0
View
DYD2_k127_1740592_15
Phosphoribosyl transferase domain
K07100
-
-
0.0000000000000000116
92.0
View
DYD2_k127_1740592_16
Binds together with S18 to 16S ribosomal RNA
K02990
-
-
0.0000000000000002271
83.0
View
DYD2_k127_1740592_17
Haloacid dehalogenase-like hydrolase
K07025
-
-
0.000000000000002812
83.0
View
DYD2_k127_1740592_18
rRNA binding
K02963
GO:0003674,GO:0003676,GO:0003723,GO:0003729,GO:0003735,GO:0005198,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0006412,GO:0006518,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0015935,GO:0019538,GO:0019843,GO:0022626,GO:0022627,GO:0032991,GO:0034641,GO:0034645,GO:0043043,GO:0043170,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:0048027,GO:0070181,GO:0071704,GO:0097159,GO:1901363,GO:1901564,GO:1901566,GO:1901576,GO:1990904
-
0.00000000007037
64.0
View
DYD2_k127_1740592_19
DHH family
K06881
-
3.1.13.3,3.1.3.7
0.000008649
58.0
View
DYD2_k127_1740592_2
Belongs to the FtsK SpoIIIE SftA family
K03466
-
-
0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001768
484.0
View
DYD2_k127_1740592_20
Binds directly to 16S ribosomal RNA
K02968
-
-
0.00002835
50.0
View
DYD2_k127_1740592_3
An RNase that has 5'-3' exonuclease and possibly endonuclease activity. Involved in maturation of rRNA and in some organisms also mRNA maturation and or decay
K12574
-
-
0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000291
443.0
View
DYD2_k127_1740592_4
Involved in base excision repair of DNA damaged by oxidation or by mutagenic agents. Acts as DNA glycosylase that recognizes and removes damaged bases. Has a preference for oxidized purines, such as 7,8-dihydro-8-oxoguanine (8-oxoG). Has AP (apurinic apyrimidinic) lyase activity and introduces nicks in the DNA strand. Cleaves the DNA backbone by beta-delta elimination to generate a single-strand break at the site of the removed base with both 3'- and 5'-phosphates
K10563
-
3.2.2.23,4.2.99.18
0.000000000000000000000000000000000000000000000000000002601
203.0
View
DYD2_k127_1740592_5
helix_turn_helix, Lux Regulon
K18286
-
3.5.4.40
0.000000000000000000000000000000000000000000000000000107
192.0
View
DYD2_k127_1740592_6
Responsible for synthesis of pseudouridine from uracil- 55 in the psi GC loop of transfer RNAs
K03177
GO:0001522,GO:0003674,GO:0003824,GO:0006139,GO:0006396,GO:0006399,GO:0006400,GO:0006725,GO:0006807,GO:0008033,GO:0008150,GO:0008152,GO:0009451,GO:0009982,GO:0009987,GO:0010467,GO:0016070,GO:0016071,GO:0016556,GO:0016853,GO:0016866,GO:0034470,GO:0034641,GO:0034660,GO:0043170,GO:0043412,GO:0044237,GO:0044238,GO:0046483,GO:0071704,GO:0090304,GO:1901360,GO:1990481
5.4.99.25
0.0000000000000000000000000000000000000000000000000003694
193.0
View
DYD2_k127_1740592_7
Uracil DNA glycosylase superfamily
K21929
-
3.2.2.27
0.0000000000000000000000000000000000000000000000000005154
190.0
View
DYD2_k127_1740592_8
FtsJ-like methyltransferase
K06442
-
2.1.1.226,2.1.1.227
0.0000000000000000000000000000000000000000001615
169.0
View
DYD2_k127_1740592_9
Involved in peptide bond synthesis. Stimulates efficient translation and peptide-bond synthesis on native or reconstituted 70S ribosomes in vitro. Probably functions indirectly by altering the affinity of the ribosome for aminoacyl-tRNA, thus increasing their reactivity as acceptors for peptidyl transferase
K02356
GO:0003674,GO:0003676,GO:0003723,GO:0003746,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006412,GO:0006414,GO:0006518,GO:0006807,GO:0008135,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0019538,GO:0034641,GO:0034645,GO:0043043,GO:0043170,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044424,GO:0044464,GO:0071704,GO:0097159,GO:1901363,GO:1901564,GO:1901566,GO:1901576
-
0.00000000000000000000000000000000000000002225
158.0
View
DYD2_k127_1766750_0
Replicative DNA helicase
K02314
-
3.6.4.12
0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004758
472.0
View
DYD2_k127_1766750_1
Catalyzes the reductive methylation of 2'-deoxyuridine- 5'-monophosphate (dUMP) to 2'-deoxythymidine-5'-monophosphate (dTMP) while utilizing 5,10-methylenetetrahydrofolate (mTHF) as the methyl donor, and NADPH and FADH(2) as the reductant
-
-
-
0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002242
381.0
View
DYD2_k127_1766750_2
DNA polymerase III is a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria. This DNA polymerase also exhibits 3' to 5' exonuclease activity
K02343
-
2.7.7.7
0.000000000000000000000000000000000000000000000000000000000000000000000000006482
270.0
View
DYD2_k127_1766750_3
Binds directly to 23S rRNA. The L1 stalk is quite mobile in the ribosome, and is involved in E site tRNA release
K02863
-
-
0.00000000000000000000000000000000000000000000000000000000000000000002473
245.0
View
DYD2_k127_1766750_4
dUTPase
K01494
-
3.5.4.13
0.0000000000000000000000000000000000000016
156.0
View
DYD2_k127_1766750_5
Phosphorylation of dTMP to form dTDP in both de novo and salvage pathways of dTTP synthesis
K00943
-
2.7.4.9
0.00000000000000000000000000000000000003284
165.0
View
DYD2_k127_1766750_6
Forms part of the ribosomal stalk which helps the ribosome interact with GTP-bound translation factors. Is thus essential for accurate translation
K02935
-
-
0.000000000000000000000000000007004
124.0
View
DYD2_k127_1766750_7
Forms part of the ribosomal stalk, playing a central role in the interaction of the ribosome with GTP-bound translation factors
K02864
-
-
0.00000000000000000001992
98.0
View
DYD2_k127_1766750_8
Binds to DNA and alters its conformation. May be involved in regulation of gene expression, nucleoid organization and DNA protection
K09747
-
-
0.00000003371
58.0
View
DYD2_k127_177040_0
Cell wall formation. Catalyzes the addition of glutamate to the nucleotide precursor UDP-N-acetylmuramoyl-L-alanine (UMA)
K01925
-
6.3.2.9
0.000000000000000000000000000000000000000000000000000000000000000000000000001567
272.0
View
DYD2_k127_177040_1
Catalyzes the 1,3-allylic rearrangement of the homoallylic substrate isopentenyl (IPP) to its highly electrophilic allylic isomer, dimethylallyl diphosphate (DMAPP)
K01823
GO:0003674,GO:0003824,GO:0004452,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006629,GO:0006644,GO:0006720,GO:0006793,GO:0006796,GO:0008150,GO:0008152,GO:0008299,GO:0008610,GO:0008654,GO:0009058,GO:0009240,GO:0009987,GO:0016853,GO:0016860,GO:0016863,GO:0019637,GO:0044237,GO:0044238,GO:0044249,GO:0044255,GO:0044424,GO:0044464,GO:0046490,GO:0071704,GO:0090407,GO:1901576
5.3.3.2
0.00000000000000000000000000000000000000000000000000005038
193.0
View
DYD2_k127_177040_2
Catalyzes the oxidation of 5,10- methylenetetrahydrofolate to 5,10-methenyltetrahydrofolate and then the hydrolysis of 5,10-methenyltetrahydrofolate to 10- formyltetrahydrofolate
K01491
-
1.5.1.5,3.5.4.9
0.000000000000000000000000000000000000000000000004759
182.0
View
DYD2_k127_177040_3
Part of the twin-arginine translocation (Tat) system that transports large folded proteins containing a characteristic twin-arginine motif in their signal peptide across membranes
K03118
-
-
0.000000000000000001031
94.0
View
DYD2_k127_177040_4
transmembrane transporter activity
K08166,K08170
GO:0005575,GO:0005623,GO:0005886,GO:0016020,GO:0044464,GO:0071944
-
0.000000000000000027
89.0
View
DYD2_k127_177040_5
phosphorelay signal transduction system
-
-
-
0.00000000000002999
77.0
View
DYD2_k127_1828674_0
A helicase nuclease that prepares dsDNA breaks (DSB) for recombinational DNA repair. Binds to DSBs and unwinds DNA via a highly rapid and processive ATP-dependent bidirectional helicase activity. Unwinds dsDNA until it encounters a Chi (crossover hotspot instigator) sequence from the 3' direction. Cuts ssDNA a few nucleotides 3' to the Chi site. The properties and activities of the enzyme are changed at Chi. The Chi-altered holoenzyme produces a long 3'-ssDNA overhang and facilitates RecA-binding to the ssDNA for homologous DNA recombination and repair. Holoenzyme degrades any linearized DNA that is unable to undergo homologous recombination. In the holoenzyme this subunit has ssDNA-dependent ATPase and 5'-3' helicase activity. When added to pre-assembled RecBC greatly stimulates nuclease activity and augments holoenzyme processivity. Negatively regulates the RecA-loading ability of RecBCD
K03657,K15255
-
3.6.4.12
0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001382
522.0
View
DYD2_k127_1828674_1
Belongs to the glycosyl hydrolase 1 family
K05350
-
3.2.1.21
0.0000000000000000000000000000000000000005919
153.0
View
DYD2_k127_1828674_2
Removes the formyl group from the N-terminal Met of newly synthesized proteins. Requires at least a dipeptide for an efficient rate of reaction. N-terminal L-methionine is a prerequisite for activity but the enzyme has broad specificity at other positions
K01462
GO:0003674,GO:0003824,GO:0006464,GO:0006807,GO:0008150,GO:0008152,GO:0009987,GO:0016787,GO:0016810,GO:0016811,GO:0018193,GO:0018206,GO:0019538,GO:0031365,GO:0036211,GO:0042586,GO:0043170,GO:0043412,GO:0043686,GO:0044237,GO:0044238,GO:0044260,GO:0044267,GO:0071704,GO:1901564
3.5.1.88
0.00000000000000000000000000001183
125.0
View
DYD2_k127_1828674_3
MazG nucleotide pyrophosphohydrolase domain
-
-
-
0.00000000000000000000007406
101.0
View
DYD2_k127_1828674_5
HAD-hyrolase-like
-
-
-
0.000000000001244
76.0
View
DYD2_k127_1828674_6
A protein kinase that phosphorylates Ser and Thr residues. Probably acts to suppress the effects of stress linked to accumulation of reactive oxygen species. Probably involved in the extracytoplasmic stress response
-
-
-
0.0000000103
60.0
View
DYD2_k127_1915188_0
Catalyzes the reversible interconversion of serine and glycine with tetrahydrofolate (THF) serving as the one-carbon carrier. This reaction serves as the major source of one-carbon groups required for the biosynthesis of purines, thymidylate, methionine, and other important biomolecules. Also exhibits THF- independent aldolase activity toward beta-hydroxyamino acids, producing glycine and aldehydes, via a retro-aldol mechanism
K00600
-
2.1.2.1
0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000941
458.0
View
DYD2_k127_1915188_1
UDP-N-acetylglucosamine 1-carboxyvinyltransferase
K00790
-
2.5.1.7
0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001677
406.0
View
DYD2_k127_1915188_2
Catalyzes the formation of (S)-2-(5-amino-1-(5-phospho-D-ribosyl)imidazole-4- carboxamido)succinate from 5-amino-1-(5-phospho-D-ribosyl)imidazole-4-carboxylate and L-aspartate in purine biosynthesis
K01923
-
6.3.2.6
0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003989
333.0
View
DYD2_k127_1915188_3
TIGRFAM haloacid dehalogenase superfamily, subfamily IA, variant 3 with third motif having DD or ED
K19270
-
3.1.3.23
0.000000000000000000000000000000000000000000000000000000000000000000247
235.0
View
DYD2_k127_1915188_4
Phosphoribosylaminoimidazole carboxylase
K11808
GO:0003674,GO:0003824,GO:0004638,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006139,GO:0006144,GO:0006163,GO:0006164,GO:0006188,GO:0006189,GO:0006725,GO:0006753,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009112,GO:0009113,GO:0009117,GO:0009123,GO:0009124,GO:0009126,GO:0009127,GO:0009150,GO:0009152,GO:0009156,GO:0009161,GO:0009165,GO:0009167,GO:0009168,GO:0009259,GO:0009260,GO:0009405,GO:0009987,GO:0016829,GO:0016830,GO:0016831,GO:0018130,GO:0019438,GO:0019637,GO:0019693,GO:0034641,GO:0034654,GO:0042440,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0044419,GO:0044424,GO:0044464,GO:0046040,GO:0046083,GO:0046084,GO:0046112,GO:0046148,GO:0046390,GO:0046483,GO:0051704,GO:0055086,GO:0071704,GO:0072521,GO:0072522,GO:0090407,GO:1901135,GO:1901137,GO:1901293,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576
4.1.1.21
0.000000000000000000000000000000000000000000002479
169.0
View
DYD2_k127_1915188_5
Cell wall formation
K00075
-
1.3.1.98
0.000000000000000000000000000000000000003298
160.0
View
DYD2_k127_1915188_6
NUDIX domain
-
-
-
0.0000000000000000000000000000000001259
137.0
View
DYD2_k127_1915188_7
Belongs to the RbsD FucU family
K02431
GO:0003674,GO:0003824,GO:0005488,GO:0005975,GO:0005996,GO:0006004,GO:0008150,GO:0008152,GO:0016853,GO:0016854,GO:0016857,GO:0019318,GO:0030246,GO:0036094,GO:0042806,GO:0044238,GO:0044281,GO:0048029,GO:0071704
5.1.3.29
0.0008576
48.0
View
DYD2_k127_1980137_0
elongation factor Tu domain 2 protein
K06207
-
-
2.922e-205
655.0
View
DYD2_k127_1980137_1
glycosyl transferase group 1
-
-
-
0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001648
453.0
View
DYD2_k127_1980137_10
phosphatidate phosphatase activity
K19302
-
3.6.1.27
0.0000000000000001292
88.0
View
DYD2_k127_1980137_11
Protein of unknown function (DUF1653)
-
-
-
0.0000000000000002601
81.0
View
DYD2_k127_1980137_12
belongs to the Fur family
K03711
-
-
0.000000000000002624
82.0
View
DYD2_k127_1980137_13
ZIP Zinc transporter
K16267
-
-
0.000000000003026
70.0
View
DYD2_k127_1980137_14
-
-
-
-
0.00000009682
56.0
View
DYD2_k127_1980137_15
Belongs to the anti-sigma-factor antagonist family
K04749
-
-
0.0000007764
55.0
View
DYD2_k127_1980137_17
Catalyzes the phosphorylation of ribose 1,5-bisphosphate to 5-phospho-D-ribosyl alpha-1-diphosphate (PRPP)
K05774
-
2.7.4.23
0.0004784
51.0
View
DYD2_k127_1980137_2
Catalyzes the formation of S-adenosylmethionine (AdoMet) from methionine and ATP. The overall synthetic reaction is composed of two sequential steps, AdoMet formation and the subsequent tripolyphosphate hydrolysis which occurs prior to release of AdoMet from the enzyme
K00789
GO:0003674,GO:0003824,GO:0004478,GO:0005488,GO:0005515,GO:0005575,GO:0005618,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005886,GO:0008150,GO:0016020,GO:0016740,GO:0016765,GO:0019899,GO:0030312,GO:0035375,GO:0040007,GO:0044424,GO:0044444,GO:0044464,GO:0071944
2.5.1.6
0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002404
379.0
View
DYD2_k127_1980137_3
Catalyzes the conversion of the cyclic tetrahydrodipicolinate (THDP) into the acyclic N-succinyl-L-2- amino-6-oxopimelate using succinyl-CoA
K00674
GO:0000287,GO:0003674,GO:0003824,GO:0005488,GO:0005575,GO:0005618,GO:0005623,GO:0005886,GO:0008150,GO:0008666,GO:0016020,GO:0016410,GO:0016740,GO:0016746,GO:0016747,GO:0016748,GO:0016749,GO:0030312,GO:0031402,GO:0031420,GO:0040007,GO:0043167,GO:0043169,GO:0044464,GO:0046872,GO:0048037,GO:0050662,GO:0071944
2.3.1.117
0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003332
337.0
View
DYD2_k127_1980137_4
glycoside hydrolase family 37
-
-
-
0.00000000000000000000000000000000000000000000000000000000000000000000000000000000002987
291.0
View
DYD2_k127_1980137_5
Predicted membrane protein (DUF2207)
-
-
-
0.00000000000000000000000000000000000000000000000000000000000000000000000000001107
283.0
View
DYD2_k127_1980137_6
Protein-L-isoaspartate(D-aspartate) O-methyltransferase (PCMT)
K00573
-
2.1.1.77
0.000000000000000000000000000000000000000000000000008436
186.0
View
DYD2_k127_1980137_7
protein conserved in bacteria
-
-
-
0.00000000000000000000000166
108.0
View
DYD2_k127_1980137_8
Transglycosylase SLT domain
-
-
-
0.00000000000000000007026
98.0
View
DYD2_k127_1980137_9
ParE toxin of type II toxin-antitoxin system, parDE
K06218
-
-
0.0000000000000000006906
89.0
View
DYD2_k127_2019827_0
ATPase that binds to both the 70S ribosome and the 50S ribosomal subunit in a nucleotide-independent manner
K06942
-
-
0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001385
319.0
View
DYD2_k127_2019827_1
Domain of unknown function (DUF378)
K09779
-
-
0.00000000000000266
79.0
View
DYD2_k127_2019827_2
GDP-mannose mannosyl hydrolase activity
K03574
-
3.6.1.55
0.0000000008418
67.0
View
DYD2_k127_2057735_0
Beta-lactamase
-
-
-
0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001979
503.0
View
DYD2_k127_2057735_1
Endoribonuclease that initiates mRNA decay
K18682
-
-
0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005152
317.0
View
DYD2_k127_2057735_2
metallophosphoesterase
K02029,K02030,K09769
GO:0003674,GO:0003824,GO:0004112,GO:0004113,GO:0008081,GO:0016787,GO:0016788,GO:0042578
-
0.00000000000000000000000000000000000000000000000405
183.0
View
DYD2_k127_2057735_3
-
-
-
-
0.0008668
42.0
View
DYD2_k127_2091_0
Prevents misfolding and promotes the refolding and proper assembly of unfolded polypeptides generated under stress conditions
K04077
GO:0003674,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006457,GO:0006458,GO:0008150,GO:0009987,GO:0016465,GO:0032991,GO:0044183,GO:0044424,GO:0044444,GO:0044445,GO:0044464,GO:0051082,GO:0061077,GO:0101031,GO:1990220
-
0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003711
529.0
View
DYD2_k127_2091_1
Binds to Cpn60 in the presence of Mg-ATP and suppresses the ATPase activity of the latter
K04078
-
-
0.0000000000000000004806
89.0
View
DYD2_k127_2093373_0
Glycosyltransferase, group 2 family protein
K20444
-
-
0.000000000000000000000000000000001667
144.0
View
DYD2_k127_2093373_1
Glycosyl transferase, family 2
K07011
-
-
0.00000000000000000000000000000004683
137.0
View
DYD2_k127_2093373_2
FG-GAP repeat protein
-
-
-
0.00000000000000000000002057
112.0
View
DYD2_k127_2093373_3
Amidohydrolase
K10221
-
3.1.1.57
0.0000006492
53.0
View
DYD2_k127_2260184_0
-
-
-
-
0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008039
317.0
View
DYD2_k127_2260184_1
NUDIX domain
-
-
-
0.00000000000000000000000000000000008275
138.0
View
DYD2_k127_2260184_2
Acetyltransferase (GNAT) domain
K03817
-
-
0.00000000000000000000000000000157
127.0
View
DYD2_k127_2260184_3
Peptidase family S51
K05995
-
3.4.13.21
0.00000000000000000000000003384
116.0
View
DYD2_k127_2260184_4
DNA / pantothenate metabolism flavoprotein
K21977
-
6.3.2.5
0.00000000000000000000004674
114.0
View
DYD2_k127_2260184_5
Ham1 family
-
-
-
0.00000000000000006245
88.0
View
DYD2_k127_2260184_6
L-ribulose-5-phosphate 4-epimerase
K03077
-
5.1.3.4
0.00001989
57.0
View
DYD2_k127_2365339_0
-
-
-
-
0.00000000000000000007866
91.0
View
DYD2_k127_2365339_1
cell wall surface anchor family protein
-
-
-
0.0000000000000000002215
104.0
View
DYD2_k127_2365339_3
Unextendable partial coding region
-
-
-
0.0000000000002048
74.0
View
DYD2_k127_2365339_4
Methyl-transferase
K00558
-
2.1.1.37
0.0007315
53.0
View
DYD2_k127_2368848_0
UvrD/REP helicase N-terminal domain
K03657
-
3.6.4.12
0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003239
599.0
View
DYD2_k127_2368848_1
G5
K21688
-
-
0.000000000000000000000000000002826
134.0
View
DYD2_k127_2368848_2
NUDIX domain
-
-
-
0.000004263
55.0
View
DYD2_k127_2534371_0
Specifically methylates the N4 position of cytidine in position 1402 (C1402) of 16S rRNA
K03438
GO:0000154,GO:0001510,GO:0003674,GO:0003824,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006139,GO:0006364,GO:0006396,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0008168,GO:0008170,GO:0008173,GO:0008649,GO:0008757,GO:0009451,GO:0009987,GO:0010467,GO:0016070,GO:0016072,GO:0016434,GO:0016740,GO:0016741,GO:0022613,GO:0031167,GO:0032259,GO:0034470,GO:0034641,GO:0034660,GO:0042254,GO:0043170,GO:0043412,GO:0043414,GO:0044085,GO:0044237,GO:0044238,GO:0044260,GO:0044424,GO:0044464,GO:0046483,GO:0070475,GO:0071424,GO:0071704,GO:0071840,GO:0090304,GO:0140098,GO:0140102,GO:1901360
2.1.1.199
0.000000000000000000000000000000000000000000000000000000000000000000002041
248.0
View
DYD2_k127_2534371_1
Penicillin-binding protein dimerisation domain
K03587,K08384
-
3.4.16.4
0.00000000000000000000000000000000000000000000000000000000000000000003205
254.0
View
DYD2_k127_2534371_2
First step of the lipid cycle reactions in the biosynthesis of the cell wall peptidoglycan
K01000
-
2.7.8.13
0.0000000000000000000000000000000000000000000000000000000000000004271
232.0
View
DYD2_k127_2534371_3
Belongs to the SEDS family
K03588
-
-
0.000000000000000000000000000000000000000000000000000000000000009328
231.0
View
DYD2_k127_2534371_4
Cell wall formation. Catalyzes the transfer of a GlcNAc subunit on undecaprenyl-pyrophosphoryl-MurNAc-pentapeptide (lipid intermediate I) to form undecaprenyl-pyrophosphoryl-MurNAc- (pentapeptide)GlcNAc (lipid intermediate II)
K02563
-
2.4.1.227
0.000000000000000000000000000000000000000008336
168.0
View
DYD2_k127_2534371_5
Belongs to the MraZ family
K03925
GO:0000976,GO:0001067,GO:0003674,GO:0003676,GO:0003677,GO:0003690,GO:0003700,GO:0005488,GO:0006355,GO:0008150,GO:0009889,GO:0009890,GO:0009892,GO:0010468,GO:0010556,GO:0010558,GO:0010605,GO:0010629,GO:0019219,GO:0019222,GO:0031323,GO:0031324,GO:0031326,GO:0031327,GO:0031333,GO:0040007,GO:0043254,GO:0043565,GO:0044087,GO:0044212,GO:0045892,GO:0045934,GO:0048519,GO:0048523,GO:0050789,GO:0050794,GO:0051128,GO:0051129,GO:0051171,GO:0051172,GO:0051252,GO:0051253,GO:0060255,GO:0065007,GO:0080090,GO:0097159,GO:0140110,GO:1901363,GO:1902679,GO:1903506,GO:1903507,GO:1990837,GO:2000112,GO:2000113,GO:2000142,GO:2000143,GO:2001141
-
0.00000000001109
71.0
View
DYD2_k127_2551364_0
Acts as a processive, ATP-dependent zinc metallopeptidase for both cytoplasmic and membrane proteins. Plays a role in the quality control of integral membrane proteins
K03798
GO:0003674,GO:0003824,GO:0004176,GO:0005488,GO:0005515,GO:0005575,GO:0005623,GO:0005886,GO:0006508,GO:0006807,GO:0008150,GO:0008152,GO:0008233,GO:0008237,GO:0009056,GO:0009057,GO:0016020,GO:0016462,GO:0016787,GO:0016817,GO:0016818,GO:0016887,GO:0017111,GO:0019538,GO:0030163,GO:0042623,GO:0042802,GO:0043170,GO:0044238,GO:0044464,GO:0070011,GO:0071704,GO:0071944,GO:0140096,GO:1901564,GO:1901565,GO:1901575
-
0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001025
561.0
View
DYD2_k127_2551364_1
IMP cyclohydrolase-like protein
-
-
-
0.0000000000000000000000000000000000000000000000000000000002552
211.0
View
DYD2_k127_2551364_2
Ligates lysine onto the cytidine present at position 34 of the AUA codon-specific tRNA(Ile) that contains the anticodon CAU, in an ATP-dependent manner. Cytidine is converted to lysidine, thus changing the amino acid specificity of the tRNA from methionine to isoleucine
K04075
-
6.3.4.19
0.00000000000000000000000000000001073
139.0
View
DYD2_k127_2551364_3
PFAM RNP-1 like RNA-binding protein
-
-
-
0.00000000000000000000000000001888
120.0
View
DYD2_k127_2551364_4
HIT family hydrolase
K02503
-
-
0.000000000000000000000000021
113.0
View
DYD2_k127_2551364_5
-
-
-
-
0.0000000000000000000000001146
111.0
View
DYD2_k127_2551364_6
Methyltransferase domain
-
-
-
0.00000000000000000000003717
107.0
View
DYD2_k127_2551364_7
Belongs to the UPF0200 family
-
-
-
0.0000008941
59.0
View
DYD2_k127_2582396_0
PFAM glycoside hydrolase, family 10
K01181
-
3.2.1.8
0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002015
462.0
View
DYD2_k127_2582396_1
Asparaginase, N-terminal
-
-
-
0.0000000000000000000000000000000000006447
145.0
View
DYD2_k127_2582396_2
-
-
-
-
0.000000000000000000000002804
119.0
View
DYD2_k127_2582396_3
YGGT family
-
-
-
0.000000000000000000001181
99.0
View
DYD2_k127_2582396_5
Major facilitator Superfamily
-
GO:0003674,GO:0005215,GO:0005575,GO:0005623,GO:0005886,GO:0005887,GO:0006810,GO:0008150,GO:0016020,GO:0016021,GO:0022857,GO:0031224,GO:0031226,GO:0044425,GO:0044459,GO:0044464,GO:0051179,GO:0051234,GO:0055085,GO:0071944
-
0.000842
51.0
View
DYD2_k127_2588255_0
Part of the Sec protein translocase complex. Interacts with the SecYEG preprotein conducting channel. Has a central role in coupling the hydrolysis of ATP to the transfer of proteins into and across the cell membrane, serving as an ATP-driven molecular motor driving the stepwise translocation of polypeptide chains across the membrane
K03070
GO:0000166,GO:0003674,GO:0003824,GO:0005215,GO:0005488,GO:0005524,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005886,GO:0005887,GO:0006810,GO:0008104,GO:0008144,GO:0008150,GO:0008320,GO:0008565,GO:0015031,GO:0015399,GO:0015405,GO:0015440,GO:0015450,GO:0015462,GO:0015833,GO:0016020,GO:0016021,GO:0016462,GO:0016787,GO:0016817,GO:0016818,GO:0016887,GO:0017076,GO:0017111,GO:0022804,GO:0022857,GO:0022884,GO:0030554,GO:0031224,GO:0031226,GO:0031522,GO:0032553,GO:0032555,GO:0032559,GO:0032991,GO:0033036,GO:0033220,GO:0035639,GO:0036094,GO:0042623,GO:0042626,GO:0042886,GO:0042887,GO:0043167,GO:0043168,GO:0043492,GO:0043952,GO:0044424,GO:0044425,GO:0044444,GO:0044459,GO:0044464,GO:0045184,GO:0051179,GO:0051234,GO:0055085,GO:0071702,GO:0071705,GO:0071806,GO:0071944,GO:0097159,GO:0097367,GO:1901265,GO:1901363,GO:1904680
-
2.072e-211
673.0
View
DYD2_k127_2588255_1
DeoC/LacD family aldolase
K11645
-
4.1.2.13
0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001208
445.0
View
DYD2_k127_2588255_2
Acetyltransferase (GNAT) domain
-
-
-
0.000000000000000000000001252
110.0
View
DYD2_k127_2607522_0
double-stranded DNA 3'-5' exodeoxyribonuclease activity
K01142
GO:0003674,GO:0003824,GO:0003906,GO:0004518,GO:0004527,GO:0004529,GO:0004536,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006139,GO:0006259,GO:0006281,GO:0006284,GO:0006725,GO:0006807,GO:0006950,GO:0006974,GO:0008150,GO:0008152,GO:0008296,GO:0008309,GO:0008311,GO:0008408,GO:0009987,GO:0016787,GO:0016788,GO:0016796,GO:0016895,GO:0033554,GO:0034641,GO:0043170,GO:0044237,GO:0044238,GO:0044260,GO:0044424,GO:0044464,GO:0046483,GO:0050896,GO:0051716,GO:0071704,GO:0090304,GO:0090305,GO:0140097,GO:1901360
3.1.11.2
0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001408
382.0
View
DYD2_k127_2607522_1
Catalyzes the reversible phosphorylation of UMP to UDP
K09903
-
2.7.4.22
0.000000000000000000000000000000000000000000000000000000000000000000000005629
252.0
View
DYD2_k127_2607522_2
Beta-lactamase superfamily domain
-
-
-
0.000000000000000000000000000000000000000000000001641
181.0
View
DYD2_k127_2607522_3
short chain dehydrogenase
-
-
-
0.00000000000000000000000000000000000000000009579
168.0
View
DYD2_k127_2607522_4
Luciferase-like monooxygenase
K14728
-
-
0.000000000000000000000000000000000000000907
148.0
View
DYD2_k127_2607522_5
ABC1 family
K03688
-
-
0.000000000000000000000000002696
127.0
View
DYD2_k127_2607522_6
Resolvase, N terminal domain
-
-
-
0.00000001415
57.0
View
DYD2_k127_2810557_0
Catalyzes the first step in hexosamine metabolism, converting fructose-6P into glucosamine-6P using glutamine as a nitrogen source
K00820
GO:0003674,GO:0003824,GO:0004360,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006002,GO:0006040,GO:0006047,GO:0006139,GO:0006464,GO:0006486,GO:0006487,GO:0006725,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0008483,GO:0009058,GO:0009059,GO:0009100,GO:0009101,GO:0009225,GO:0009987,GO:0016740,GO:0016769,GO:0019538,GO:0019637,GO:0034641,GO:0034645,GO:0036211,GO:0043170,GO:0043412,GO:0043413,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044281,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0055086,GO:0070085,GO:0070548,GO:0071704,GO:1901135,GO:1901137,GO:1901360,GO:1901564,GO:1901566,GO:1901576
2.6.1.16
0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001189
517.0
View
DYD2_k127_2810557_1
PFAM glycosyl transferase group 1
-
-
-
0.000000000000000000000000000000000000000000000000000000000000000000000002913
257.0
View
DYD2_k127_2810557_2
PFAM sugar transferase
-
-
-
0.00000000000000000000000000000000000000000000000000000000000000007082
241.0
View
DYD2_k127_2810557_3
Nucleotidyl transferase
K00971
-
2.7.7.13
0.0000000000000000000000000000000000000000000000000000000001984
215.0
View
DYD2_k127_2810557_4
Catalyzes the dephosphorylation of undecaprenyl diphosphate (UPP)
K06153
-
3.6.1.27
0.000000000000000000000000000000000000000000000000000001717
200.0
View
DYD2_k127_2810557_5
Represses a number of genes involved in the response to DNA damage (SOS response), including recA and lexA. In the presence of single-stranded DNA, RecA interacts with LexA causing an autocatalytic cleavage which disrupts the DNA-binding part of LexA, leading to derepression of the SOS regulon and eventually DNA repair
K01356
-
3.4.21.88
0.000000009193
62.0
View
DYD2_k127_2810557_6
PIN domain
-
-
-
0.00000001183
61.0
View
DYD2_k127_2810557_7
GtrA-like protein
-
-
-
0.000002187
55.0
View
DYD2_k127_2810557_8
Antitoxin component of a toxin-antitoxin (TA) module
-
-
-
0.0009538
45.0
View
DYD2_k127_2827794_0
Catalyzes the attachment of serine to tRNA(Ser). Is also able to aminoacylate tRNA(Sec) with serine, to form the misacylated tRNA L-seryl-tRNA(Sec), which will be further converted into selenocysteinyl-tRNA(Sec)
K01875
-
6.1.1.11
0.0000000000000000000000000000000000000000000000000000000000000000000000000000000008701
287.0
View
DYD2_k127_2827794_1
Belongs to the helicase family. UvrD subfamily
K10742
-
3.6.4.12
0.000000000000000000000000000000000000000000000000000000000000000000000000008448
260.0
View
DYD2_k127_2827794_2
Required for dimerization of active 70S ribosomes into 100S ribosomes in stationary phase
K05808
GO:0003674,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0006417,GO:0006448,GO:0008150,GO:0009889,GO:0009890,GO:0009892,GO:0010468,GO:0010556,GO:0010558,GO:0010605,GO:0010608,GO:0010629,GO:0015935,GO:0017148,GO:0019222,GO:0022626,GO:0022627,GO:0031323,GO:0031324,GO:0031326,GO:0031327,GO:0032268,GO:0032269,GO:0032991,GO:0034248,GO:0034249,GO:0043021,GO:0043022,GO:0043024,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:0044877,GO:0045900,GO:0048519,GO:0048523,GO:0050789,GO:0050794,GO:0051171,GO:0051172,GO:0051246,GO:0051248,GO:0060255,GO:0065007,GO:0080090,GO:1990904,GO:2000112,GO:2000113
-
0.00000362
54.0
View
DYD2_k127_2827794_3
Solute carrier family 41, member 3
K15122
GO:0005575,GO:0005623,GO:0005886,GO:0006810,GO:0008150,GO:0016020,GO:0044464,GO:0051179,GO:0051234,GO:0055085,GO:0071944
-
0.00006424
50.0
View
DYD2_k127_2827794_5
Specifically methylates the N3 position of the uracil ring of uridine 1498 (m3U1498) in 16S rRNA. Acts on the fully assembled 30S ribosomal subunit
K09761
-
2.1.1.193
0.0005692
43.0
View
DYD2_k127_283652_0
helix_turn_helix multiple antibiotic resistance protein
-
-
-
0.0000002656
58.0
View
DYD2_k127_283652_1
RNA polymerase sigma factor
K03088
-
-
0.000005306
55.0
View
DYD2_k127_283652_2
Specifically dimethylates two adjacent adenosines (A1518 and A1519) in the loop of a conserved hairpin near the 3'-end of 16S rRNA in the 30S particle. May play a critical role in biogenesis of 30S subunits
K02528
GO:0000154,GO:0000179,GO:0001510,GO:0003674,GO:0003824,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006139,GO:0006364,GO:0006396,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0008168,GO:0008170,GO:0008173,GO:0008649,GO:0008757,GO:0009451,GO:0009987,GO:0010467,GO:0016070,GO:0016072,GO:0016433,GO:0016740,GO:0016741,GO:0022613,GO:0031167,GO:0032259,GO:0034470,GO:0034641,GO:0034660,GO:0042254,GO:0043170,GO:0043412,GO:0043414,GO:0044085,GO:0044237,GO:0044238,GO:0044260,GO:0044424,GO:0044464,GO:0046483,GO:0071704,GO:0071840,GO:0090304,GO:0140098,GO:0140102,GO:1901360
2.1.1.182
0.0005623
44.0
View
DYD2_k127_2956581_0
Key enzyme in folate metabolism. Catalyzes an essential reaction for de novo glycine and purine synthesis, and for DNA precursor synthesis
K00287
-
1.5.1.3
0.00000000000000000000001056
106.0
View
DYD2_k127_2956581_1
-
-
-
-
0.000000000000000000003737
94.0
View
DYD2_k127_2956581_2
-
-
-
-
0.000000002209
62.0
View
DYD2_k127_3008688_0
Critical role in recombination and DNA repair. Helps process Holliday junction intermediates to mature products by catalyzing branch migration. Has a DNA unwinding activity characteristic of a DNA helicase with a 3'- to 5'- polarity. Unwinds branched duplex DNA (Y-DNA)
K03655
GO:0003674,GO:0003724,GO:0003824,GO:0004004,GO:0004386,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006139,GO:0006725,GO:0006807,GO:0008026,GO:0008150,GO:0008152,GO:0008186,GO:0009987,GO:0010501,GO:0016070,GO:0016462,GO:0016787,GO:0016817,GO:0016818,GO:0016887,GO:0017111,GO:0034641,GO:0042623,GO:0043170,GO:0044237,GO:0044238,GO:0044424,GO:0044464,GO:0046483,GO:0070035,GO:0071704,GO:0090304,GO:0140098,GO:1901360
3.6.4.12
0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002867
447.0
View
DYD2_k127_3008688_1
Catalyzes the attachment of tyrosine to tRNA(Tyr) in a two-step reaction tyrosine is first activated by ATP to form Tyr- AMP and then transferred to the acceptor end of tRNA(Tyr)
K01866
GO:0003674,GO:0003824,GO:0004812,GO:0004831,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006082,GO:0006139,GO:0006399,GO:0006520,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0009987,GO:0016070,GO:0016874,GO:0016875,GO:0019752,GO:0034641,GO:0034660,GO:0043038,GO:0043039,GO:0043170,GO:0043436,GO:0044237,GO:0044238,GO:0044281,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0071704,GO:0090304,GO:0140098,GO:0140101,GO:1901360,GO:1901564
6.1.1.1
0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004256
349.0
View
DYD2_k127_3008688_2
Methyltransferase domain
-
-
-
0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001922
304.0
View
DYD2_k127_3008688_3
PFAM glycosyl transferase, family 51
-
-
-
0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000005604
320.0
View
DYD2_k127_3030144_0
damaged site, the DNA wraps around one UvrB monomer. DNA wrap is dependent on ATP binding by UvrB and probably causes local melting of the DNA helix, facilitating insertion of UvrB beta-hairpin between the DNA strands. Then UvrB probes one DNA strand for the presence of a lesion. If a lesion is found the UvrA subunits dissociate and the UvrB-DNA preincision complex is formed. This complex is subsequently bound by UvrC and the second UvrB is released. If no lesion is found, the DNA wraps around the other UvrB subunit that will check the other stand for damage
K03702
-
-
1.748e-262
823.0
View
DYD2_k127_3030144_1
YHS domain
K06966
-
3.2.2.10
0.0000000000000000000000000002605
120.0
View
DYD2_k127_3030144_2
-
-
-
-
0.00005093
55.0
View
DYD2_k127_3207938_0
Transketolase, pyrimidine binding domain
K00615
-
2.2.1.1
0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001376
447.0
View
DYD2_k127_3207938_1
Transketolase, thiamine diphosphate binding domain
K00615
-
2.2.1.1
0.000000000000000000000000000000000000000000000000000000000000000000001407
240.0
View
DYD2_k127_3207938_2
Fructose-bisphosphate aldolase class-II
K01624
-
4.1.2.13
0.000000000000000000000000000000000000001188
160.0
View
DYD2_k127_3207938_3
pfkB family carbohydrate kinase
-
-
-
0.0000000000000000000000000000952
128.0
View
DYD2_k127_3229860_0
PFAM TrkA-N domain protein
-
-
-
0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001906
482.0
View
DYD2_k127_3229860_1
Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase
-
-
-
0.00000000000000000000000000000000000000004051
169.0
View
DYD2_k127_3229860_2
Bacterial extracellular solute-binding proteins, family 5 Middle
K02035
-
-
0.00000000000000000000000000000000000000006515
170.0
View
DYD2_k127_3229860_3
Small integral membrane protein
-
-
-
0.00000000000000000000000000000002502
131.0
View
DYD2_k127_3229860_4
Transporter associated domain
-
GO:0005575,GO:0005623,GO:0005886,GO:0016020,GO:0044464,GO:0071944
-
0.000000000000000000002891
106.0
View
DYD2_k127_3229860_5
histidine kinase HAMP region domain protein
-
-
-
0.000000000000000364
93.0
View
DYD2_k127_3234621_0
transferase activity, transferring glycosyl groups
-
-
-
0.000000000000000000000000000000000000000000000000000000006507
214.0
View
DYD2_k127_3234621_1
PFAM Methyltransferase type 11
-
-
-
0.000000000000000000000000000000000000000000000000000002015
200.0
View
DYD2_k127_3234621_2
succinyl-diaminopimelate desuccinylase
K01439
-
3.5.1.18
0.000000000000000000000000000000000007865
151.0
View
DYD2_k127_3234621_3
Stereospecific condensation of phosphoenolpyruvate (PEP) and D-erythrose-4-phosphate (E4P) giving rise to 3-deoxy-D- arabino-heptulosonate-7-phosphate (DAHP)
K01626
-
2.5.1.54
0.00000000000001125
86.0
View
DYD2_k127_3234621_4
methyltransferase activity
-
-
-
0.000000000001069
73.0
View
DYD2_k127_3272784_0
Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released. This sigma factor is the primary sigma factor during exponential growth
K03086
-
-
0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000239
385.0
View
DYD2_k127_3272784_1
Belongs to the Glu Leu Phe Val dehydrogenases family
K00260,K00261,K00262
-
1.4.1.2,1.4.1.3,1.4.1.4
0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001276
324.0
View
DYD2_k127_3272784_10
Bacterial capsule synthesis protein PGA_cap
K07282
-
-
0.0000000000000000000000001294
120.0
View
DYD2_k127_3272784_11
Protein conserved in bacteria
-
-
-
0.000000000000000000000002946
106.0
View
DYD2_k127_3272784_12
Protein of unknown function (DUF1761)
-
-
-
0.0000000000000002613
84.0
View
DYD2_k127_3272784_13
Channel that opens in response to stretch forces in the membrane lipid bilayer. May participate in the regulation of osmotic pressure changes within the cell
K03282
-
-
0.00000000003637
69.0
View
DYD2_k127_3272784_14
Beta-lactamase enzyme family
K17836
-
3.5.2.6
0.00001647
56.0
View
DYD2_k127_3272784_15
Belongs to the UPF0200 family
-
-
-
0.0000755
52.0
View
DYD2_k127_3272784_2
RNA polymerase that catalyzes the synthesis of short RNA molecules used as primers for DNA polymerase during DNA replication
K02316
-
-
0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000005926
309.0
View
DYD2_k127_3272784_3
Bacterial capsule synthesis protein PGA_cap
K07282
-
-
0.00000000000000000000000000000000000000000000000000000000000000001926
239.0
View
DYD2_k127_3272784_4
D-alanyl-D-alanine carboxypeptidase
K07260
-
3.4.17.14
0.0000000000000000000000000000000000000000000000000000000006287
210.0
View
DYD2_k127_3272784_5
Polyprenyl synthetase
K02523,K13787
GO:0003674,GO:0003824,GO:0004659,GO:0016740,GO:0016765
2.5.1.1,2.5.1.10,2.5.1.29,2.5.1.90
0.0000000000000000000000000000000000000000000000001095
191.0
View
DYD2_k127_3272784_6
TIGRFAM methionine-R-sulfoxide reductase
K07305
-
1.8.4.12
0.000000000000000000000000000000000000000000000003023
175.0
View
DYD2_k127_3272784_7
Arginyl-tRNA synthetase
K01887
GO:0003674,GO:0003824,GO:0004812,GO:0004814,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006082,GO:0006139,GO:0006399,GO:0006412,GO:0006418,GO:0006420,GO:0006518,GO:0006520,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0016070,GO:0016874,GO:0016875,GO:0019538,GO:0019752,GO:0034641,GO:0034645,GO:0034660,GO:0043038,GO:0043039,GO:0043043,GO:0043170,GO:0043436,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044281,GO:0044424,GO:0044464,GO:0046483,GO:0071704,GO:0090304,GO:0140098,GO:0140101,GO:1901360,GO:1901564,GO:1901566,GO:1901576
6.1.1.19
0.000000000000000000000000000000000000000000000007267
187.0
View
DYD2_k127_3272784_8
TIGRFAM haloacid dehalogenase superfamily, subfamily IA, variant 1 with third motif having Dx(3-4)D or Dx(3-4)E
K01091
-
3.1.3.18
0.00000000000000000000000000000000000000002529
162.0
View
DYD2_k127_3272784_9
3'-to-5' exoribonuclease specific for small oligoribonucleotides
K13288
-
-
0.00000000000000000000000000000000003764
140.0
View
DYD2_k127_3274632_0
DNA-dependent ATPase involved in processing of recombination intermediates, plays a role in repairing DNA breaks. Stimulates the branch migration of RecA-mediated strand transfer reactions, allowing the 3' invading strand to extend heteroduplex DNA faster. Binds ssDNA in the presence of ADP but not other nucleotides, has ATPase activity that is stimulated by ssDNA and various branched DNA structures, but inhibited by SSB. Does not have RecA's homology-searching function
K04485
-
-
0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001788
415.0
View
DYD2_k127_3274632_1
Large family of predicted nucleotide-binding domains
-
-
-
0.00000000000000000000000000000000000000000000000000000005586
203.0
View
DYD2_k127_3274632_2
nuclear chromosome segregation
-
-
-
0.000000000000000000106
94.0
View
DYD2_k127_3329952_0
Peptide chain release factor 1 directs the termination of translation in response to the peptide chain termination codons UAG and UAA
K02835,K15034
GO:0003674,GO:0003676,GO:0003723,GO:0003747,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006412,GO:0006415,GO:0006518,GO:0006807,GO:0008079,GO:0008135,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0016043,GO:0016149,GO:0019538,GO:0022411,GO:0032984,GO:0034641,GO:0034645,GO:0043021,GO:0043022,GO:0043043,GO:0043170,GO:0043603,GO:0043604,GO:0043624,GO:0043933,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044424,GO:0044444,GO:0044464,GO:0044877,GO:0071704,GO:0071840,GO:0097159,GO:1901363,GO:1901564,GO:1901566,GO:1901576
-
0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002565
387.0
View
DYD2_k127_3329952_1
histidine kinase, dimerisation and phosphoacceptor region
-
-
-
0.0000000000000000000000000000000000000000000000000000000000000000000000006888
256.0
View
DYD2_k127_3329952_10
Catalyzes the attachment of proline to tRNA(Pro) in a two-step reaction proline is first activated by ATP to form Pro- AMP and then transferred to the acceptor end of tRNA(Pro). As ProRS can inadvertently accommodate and process non-cognate amino acids such as alanine and cysteine, to avoid such errors it has two additional distinct editing activities against alanine. One activity is designated as 'pretransfer' editing and involves the tRNA(Pro)-independent hydrolysis of activated Ala-AMP. The other activity is designated 'posttransfer' editing and involves deacylation of mischarged Ala-tRNA(Pro). The misacylated Cys- tRNA(Pro) is not edited by ProRS
K01881
GO:0005575,GO:0005618,GO:0005623,GO:0005886,GO:0008150,GO:0016020,GO:0030312,GO:0040007,GO:0044464,GO:0071944
6.1.1.15
0.000000000000000000000171
101.0
View
DYD2_k127_3329952_11
CAAX protease self-immunity
K07052
-
-
0.00000224
58.0
View
DYD2_k127_3329952_2
Belongs to the universal ribosomal protein uS2 family
K02967
GO:0003674,GO:0003735,GO:0005198,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0006412,GO:0006518,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0015935,GO:0019538,GO:0022626,GO:0022627,GO:0032991,GO:0034641,GO:0034645,GO:0043043,GO:0043170,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:0071704,GO:1901564,GO:1901566,GO:1901576,GO:1990904
-
0.00000000000000000000000000000000000000000000000000000000000001741
226.0
View
DYD2_k127_3329952_3
Catalyzes the condensation of isopentenyl diphosphate (IPP) with allylic pyrophosphates generating different type of terpenoids
K00806
GO:0002094,GO:0003674,GO:0003824,GO:0004659,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006066,GO:0006629,GO:0006720,GO:0008150,GO:0008152,GO:0008299,GO:0008610,GO:0009058,GO:0009987,GO:0016093,GO:0016094,GO:0016740,GO:0016765,GO:0044237,GO:0044238,GO:0044249,GO:0044255,GO:0044281,GO:0044283,GO:0044424,GO:0044444,GO:0044464,GO:0046165,GO:0071704,GO:1901576,GO:1901615,GO:1901617
2.5.1.31
0.0000000000000000000000000000000000000000000000000000000000258
213.0
View
DYD2_k127_3329952_4
Associates with the EF-Tu.GDP complex and induces the exchange of GDP to GTP. It remains bound to the aminoacyl-tRNA.EF- Tu.GTP complex up to the GTP hydrolysis stage on the ribosome
K02357
-
-
0.000000000000000000000000000000000000000000000000000000001047
207.0
View
DYD2_k127_3329952_5
PFAM peptidase S1 and S6, chymotrypsin Hap
-
-
-
0.0000000000000000000000000000000000000000000000000000003194
209.0
View
DYD2_k127_3329952_6
Methylates the class 1 translation termination release factors RF1 PrfA and RF2 PrfB on the glutamine residue of the universally conserved GGQ motif
K02493
GO:0003674,GO:0003824,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0008150,GO:0008152,GO:0008168,GO:0008757,GO:0016740,GO:0016741,GO:0032259,GO:0044424,GO:0044444,GO:0044464
2.1.1.297
0.000000000000000000000000000000000000000000000004759
182.0
View
DYD2_k127_3329952_7
zinc metalloprotease
K11749
-
-
0.000000000000000000000000000000000000000002615
169.0
View
DYD2_k127_3329952_8
Responsible for the release of ribosomes from messenger RNA at the termination of protein biosynthesis. May increase the efficiency of translation by recycling ribosomes from one round of translation to another
K02838
-
-
0.00000000000000000000000000000000000003203
149.0
View
DYD2_k127_3329952_9
Ribosomal protein L31
K02909
-
-
0.000000000000000000000000000004603
124.0
View
DYD2_k127_3378841_0
His Kinase A (phosphoacceptor) domain
-
-
-
0.000000000000000000000000000000000000000000002911
184.0
View
DYD2_k127_3378841_1
K -dependent Na Ca exchanger
K07301
-
-
0.000000000000000000000000000000000000000001794
168.0
View
DYD2_k127_3378841_2
PFAM NADPH-dependent FMN reductase
-
-
-
0.000000000000000000000000000000000000009111
151.0
View
DYD2_k127_3378841_3
pterin-4-alpha-carbinolamine dehydratase
K01724
-
4.2.1.96
0.000000000000000000000003352
106.0
View
DYD2_k127_3378841_4
Has a glutathione-disulfide oxidoreductase activity in the presence of NADPH and glutathione reductase. Reduces low molecular weight disulfides and proteins
K03676,K06191
-
-
0.0000000000000000004349
89.0
View
DYD2_k127_3378841_5
Two component transcriptional regulator, winged helix family
-
-
-
0.0000000000000004805
82.0
View
DYD2_k127_3378841_6
DNA-binding transcription factor activity
K03892
-
-
0.00000000009707
66.0
View
DYD2_k127_3467879_0
ATPase, P-type (transporting), HAD superfamily, subfamily IC
K01533
-
3.6.3.4
4.358e-222
708.0
View
DYD2_k127_3467879_1
DNA ligase that catalyzes the formation of phosphodiester linkages between 5'-phosphoryl and 3'-hydroxyl groups in double-stranded DNA using NAD as a coenzyme and as the energy source for the reaction. It is essential for DNA replication and repair of damaged DNA
K01972
-
6.5.1.2
0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004614
544.0
View
DYD2_k127_3467879_10
NUDIX domain
K03574
-
3.6.1.55
0.00004961
52.0
View
DYD2_k127_3467879_11
sequence-specific DNA binding
-
-
-
0.0001207
47.0
View
DYD2_k127_3467879_12
RelB antitoxin
-
-
-
0.000146
48.0
View
DYD2_k127_3467879_2
Peptidase family M48
K03799
-
-
0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001031
335.0
View
DYD2_k127_3467879_3
PFAM Short-chain dehydrogenase reductase SDR
K00059,K03366
-
1.1.1.100,1.1.1.304,1.1.1.76
0.000000000000000000000000000000000000000000000000000000000000000000000000000000000001785
287.0
View
DYD2_k127_3467879_4
LemA family
K03744
-
-
0.000000000000000000000000000000000000000000000000000000000000004329
222.0
View
DYD2_k127_3467879_5
Hsp20/alpha crystallin family
K13993
-
-
0.0000000000000000000000000000000000000004625
153.0
View
DYD2_k127_3467879_6
GDSL-like Lipase/Acylhydrolase family
-
-
-
0.00000000000000000000000000000000000002571
152.0
View
DYD2_k127_3467879_8
endonuclease activity
-
-
-
0.0000005099
54.0
View
DYD2_k127_3575829_0
amino acids such as valine, to avoid such errors it has two additional distinct tRNA(Ile)-dependent editing activities. One activity is designated as 'pretransfer' editing and involves the hydrolysis of activated Val-AMP. The other activity is designated 'posttransfer' editing and involves deacylation of mischarged Val-tRNA(Ile)
K01870
-
6.1.1.5
1.592e-264
844.0
View
DYD2_k127_3575829_1
Ribonucleotide reductase, barrel domain
K00525
-
1.17.4.1
0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003069
488.0
View
DYD2_k127_3575829_2
PFAM CobQ CobB MinD ParA nucleotide binding domain
K03496
-
-
0.000000000000000000000000000000000000000000000000000000000000000000000000000000000001024
287.0
View
DYD2_k127_3575829_3
Belongs to the ParB family
K03497
-
-
0.00000000000000000000000000000000000000000000000000000000005172
215.0
View
DYD2_k127_3575829_4
Transcriptional regulator
-
-
-
0.000000000000000000000000000000000000005565
164.0
View
DYD2_k127_3575829_5
Belongs to the peptidase S26 family
K03100
-
3.4.21.89
0.000000000000000000000000008225
117.0
View
DYD2_k127_3575829_6
This protein binds to 23S rRNA in the presence of protein L20
K02888
GO:0003674,GO:0003735,GO:0005198
-
0.0000000000000007631
80.0
View
DYD2_k127_358467_0
General secretory system II, protein E domain protein
K02652
-
-
0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001322
434.0
View
DYD2_k127_358467_1
PFAM type II secretion system protein E
K02669
-
-
0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001953
388.0
View
DYD2_k127_358467_2
Type IV pilus assembly protein PilM;
K02662
-
-
0.00000000000000000000000007498
120.0
View
DYD2_k127_362147_0
transcriptional regulatory protein
-
-
-
0.0000000000000000000000000000000000000000000000000000000000000000001067
238.0
View
DYD2_k127_362147_1
Nuclease that resolves Holliday junction intermediates in genetic recombination. Cleaves the cruciform structure in supercoiled DNA by nicking to strands with the same polarity at sites symmetrically opposed at the junction in the homologous arms and leaves a 5'-terminal phosphate and a 3'-terminal hydroxyl group
K01159
-
3.1.22.4
0.0000000000000000000000000000000000000000000000672
173.0
View
DYD2_k127_3706729_0
TIGRFAM DNA polymerase III, alpha subunit
K02337
-
2.7.7.7
4.257e-296
948.0
View
DYD2_k127_3706729_1
Part of a stress-induced multi-chaperone system, it is involved in the recovery of the cell from heat-induced damage, in cooperation with DnaK, DnaJ and GrpE
K03696
-
-
2.527e-221
708.0
View
DYD2_k127_3706729_10
Cysteine-rich secretory protein family
-
-
-
0.000000000000000002954
95.0
View
DYD2_k127_3706729_11
Belongs to the UPF0102 family
K07460
-
-
0.0000000000000001907
83.0
View
DYD2_k127_3706729_12
YtxH-like protein
-
-
-
0.0002146
49.0
View
DYD2_k127_3706729_2
ERAP1-like C-terminal domain
K08776
GO:0000003,GO:0000209,GO:0000578,GO:0000793,GO:0000922,GO:0001666,GO:0003002,GO:0003674,GO:0003824,GO:0004177,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005694,GO:0005737,GO:0005819,GO:0005829,GO:0005856,GO:0006464,GO:0006508,GO:0006518,GO:0006807,GO:0006950,GO:0007049,GO:0007275,GO:0007350,GO:0007351,GO:0007389,GO:0008150,GO:0008152,GO:0008233,GO:0008235,GO:0008237,GO:0008238,GO:0008270,GO:0008595,GO:0009056,GO:0009628,GO:0009790,GO:0009792,GO:0009798,GO:0009880,GO:0009948,GO:0009952,GO:0009987,GO:0010564,GO:0010720,GO:0015630,GO:0016567,GO:0016787,GO:0019538,GO:0022402,GO:0022414,GO:0030588,GO:0030590,GO:0032446,GO:0032501,GO:0032502,GO:0033218,GO:0033554,GO:0034641,GO:0035282,GO:0036211,GO:0036293,GO:0036294,GO:0042221,GO:0042277,GO:0043167,GO:0043169,GO:0043170,GO:0043171,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043412,GO:0043603,GO:0043900,GO:0043902,GO:0044237,GO:0044238,GO:0044248,GO:0044260,GO:0044267,GO:0044422,GO:0044424,GO:0044430,GO:0044444,GO:0044446,GO:0044464,GO:0044770,GO:0044771,GO:0045595,GO:0045597,GO:0046662,GO:0046872,GO:0046914,GO:0048518,GO:0048522,GO:0048856,GO:0050789,GO:0050793,GO:0050794,GO:0050795,GO:0050896,GO:0051094,GO:0051179,GO:0051235,GO:0051239,GO:0051240,GO:0051321,GO:0051445,GO:0051640,GO:0051641,GO:0051642,GO:0051651,GO:0051657,GO:0051661,GO:0051716,GO:0051726,GO:0060281,GO:0060282,GO:0060284,GO:0061842,GO:0065007,GO:0065008,GO:0070006,GO:0070011,GO:0070482,GO:0070647,GO:0070887,GO:0071453,GO:0071456,GO:0071704,GO:0072686,GO:0097431,GO:0140096,GO:1900193,GO:1900195,GO:1901564,GO:1901565,GO:1901575,GO:1903046,GO:1903429,GO:1903431,GO:1903538,GO:1905879,GO:1905881,GO:1990947,GO:2000241,GO:2000243
-
1.508e-195
639.0
View
DYD2_k127_3706729_3
malic enzyme
K00027,K00029
-
1.1.1.38,1.1.1.40
0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003094
434.0
View
DYD2_k127_3706729_4
Participates in both transcription termination and antitermination
K02600
GO:0003674,GO:0003676,GO:0003723,GO:0005488,GO:0005575,GO:0005618,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005886,GO:0006355,GO:0008150,GO:0009889,GO:0010468,GO:0010556,GO:0016020,GO:0019219,GO:0019222,GO:0030312,GO:0031323,GO:0031326,GO:0031554,GO:0031564,GO:0040007,GO:0043244,GO:0044424,GO:0044444,GO:0044464,GO:0050789,GO:0050794,GO:0051128,GO:0051171,GO:0051252,GO:0060255,GO:0065007,GO:0071944,GO:0080090,GO:0097159,GO:1901363,GO:1903506,GO:2000112,GO:2001141
-
0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006819
315.0
View
DYD2_k127_3706729_5
Type II IV secretion system protein
K02652
-
-
0.0000000000000000000000000000000000000000000000000000000000000000000000000416
269.0
View
DYD2_k127_3706729_6
PFAM Nucleotidyl transferase
K00963
-
2.7.7.9
0.000000000000000000000000000000000000000000000000000000000000000000000006211
251.0
View
DYD2_k127_3706729_7
Endonuclease that specifically degrades the RNA of RNA- DNA hybrids
K03470
-
3.1.26.4
0.00000000000000000000000000000000000000003734
158.0
View
DYD2_k127_3706729_8
SpoU rRNA Methylase family
-
-
-
0.00000000000000000000000000000000000002341
149.0
View
DYD2_k127_3706729_9
This protein is located at the 30S-50S ribosomal subunit interface and may play a role in the structure and function of the aminoacyl-tRNA binding site
K02884
-
-
0.00000000000000000000000001432
115.0
View
DYD2_k127_4039176_0
Catalyzes the attachment of glutamate to tRNA(Glu) in a two-step reaction glutamate is first activated by ATP to form Glu-AMP and then transferred to the acceptor end of tRNA(Glu)
K01885
-
6.1.1.17
0.0000000000000000000000000000000000000000001516
164.0
View
DYD2_k127_4039176_1
Sortase (surface protein transpeptidase)
K07284
-
3.4.22.70
0.0000000000004811
81.0
View
DYD2_k127_4039176_2
PFAM PEGA domain
-
-
-
0.000008567
58.0
View
DYD2_k127_4039176_3
Resolvase
-
-
-
0.0007745
42.0
View
DYD2_k127_4101297_0
Ig-like domain from next to BRCA1 gene
-
-
-
0.00000001831
66.0
View
DYD2_k127_4101297_1
Prevents misfolding and promotes the refolding and proper assembly of unfolded polypeptides generated under stress conditions
K04077
GO:0003674,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006457,GO:0006458,GO:0008150,GO:0009987,GO:0016465,GO:0032991,GO:0044183,GO:0044424,GO:0044444,GO:0044445,GO:0044464,GO:0051082,GO:0061077,GO:0101031,GO:1990220
-
0.00000886
48.0
View
DYD2_k127_4146842_0
Belongs to the class I-like SAM-binding methyltransferase superfamily. RNA M5U methyltransferase family
K03215
-
2.1.1.190
0.00000000000000000000000000000000000000001723
169.0
View
DYD2_k127_4146842_1
Specifically methylates the N3 position of the uracil ring of uridine 1498 (m3U1498) in 16S rRNA. Acts on the fully assembled 30S ribosomal subunit
K09761
-
2.1.1.193
0.000000000000000000000007291
109.0
View
DYD2_k127_4181807_0
Glycosyl transferase 4-like domain
K08256
-
2.4.1.345
0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000627
289.0
View
DYD2_k127_4181807_1
Glycosyl transferase 4-like
K08256
GO:0000026,GO:0000030,GO:0000287,GO:0003674,GO:0003824,GO:0004376,GO:0004377,GO:0005488,GO:0005575,GO:0005623,GO:0005886,GO:0006629,GO:0006643,GO:0006644,GO:0006650,GO:0006664,GO:0006793,GO:0006796,GO:0008150,GO:0008152,GO:0008610,GO:0009058,GO:0009247,GO:0009987,GO:0016020,GO:0016740,GO:0016757,GO:0016758,GO:0019637,GO:0043167,GO:0043169,GO:0043750,GO:0044237,GO:0044238,GO:0044249,GO:0044255,GO:0044464,GO:0046467,GO:0046486,GO:0046488,GO:0046872,GO:0070085,GO:0071704,GO:0071944,GO:0097502,GO:1901135,GO:1901137,GO:1901576,GO:1903509
2.4.1.345
0.00000000000000000000000000000000000000000003436
175.0
View
DYD2_k127_4181807_2
AI-2E family transporter
-
-
-
0.0000000000000000000000000000003106
136.0
View
DYD2_k127_4181807_3
D-alanyl-D-alanine carboxypeptidase
K07260
-
3.4.17.14
0.0000000000000008151
87.0
View
DYD2_k127_4181807_4
Serine aminopeptidase, S33
-
-
-
0.00003552
55.0
View
DYD2_k127_4181807_5
-
-
-
-
0.0001754
45.0
View
DYD2_k127_4261881_0
PFAM Bacterial type II secretion system protein F domain
K02653
-
-
0.00000000000000000000000000000000000000000000000000000000000000189
229.0
View
DYD2_k127_4261881_1
recombinase XerD
K04763
-
-
0.00000000000000000000000000000000000000000001861
169.0
View
DYD2_k127_4261881_2
Cleaves type-4 fimbrial leader sequence and methylates the N-terminal (generally Phe) residue
K02654
-
3.4.23.43
0.0000000000000000000000000000000000001618
151.0
View
DYD2_k127_4371947_0
An essential GTPase which binds GTP, GDP and possibly (p)ppGpp with moderate affinity, with high nucleotide exchange rates and a fairly low GTP hydrolysis rate. Plays a role in control of the cell cycle, stress response, ribosome biogenesis and in those bacteria that undergo differentiation, in morphogenesis control
K03979
-
-
0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001687
359.0
View
DYD2_k127_4371947_1
COG2925 Exonuclease I
K01141
GO:0000175,GO:0000287,GO:0000738,GO:0003674,GO:0003676,GO:0003677,GO:0003697,GO:0003824,GO:0004518,GO:0004527,GO:0004529,GO:0004532,GO:0004536,GO:0004540,GO:0005488,GO:0006139,GO:0006259,GO:0006308,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0008296,GO:0008297,GO:0008310,GO:0008408,GO:0008852,GO:0009056,GO:0009057,GO:0009987,GO:0016070,GO:0016787,GO:0016788,GO:0016796,GO:0016829,GO:0016835,GO:0016895,GO:0016896,GO:0019439,GO:0034641,GO:0034655,GO:0043167,GO:0043169,GO:0043170,GO:0044237,GO:0044238,GO:0044248,GO:0044260,GO:0044265,GO:0044270,GO:0046483,GO:0046700,GO:0046872,GO:0051575,GO:0071704,GO:0090304,GO:0090305,GO:0090501,GO:0090503,GO:0097159,GO:0140097,GO:0140098,GO:1901360,GO:1901361,GO:1901363,GO:1901575
3.1.11.1
0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001514
353.0
View
DYD2_k127_4371947_2
The UvrABC repair system catalyzes the recognition and processing of DNA lesions. UvrA is an ATPase and a DNA-binding protein. A damage recognition complex composed of 2 UvrA and 2 UvrB subunits scans DNA for abnormalities. When the presence of a lesion has been verified by UvrB, the UvrA molecules dissociate
K03701
-
-
0.00000000000000000000000000000000000000000000000000000000000000000002178
237.0
View
DYD2_k127_4371947_3
Functions as a peptidoglycan terminase that cleaves nascent peptidoglycan strands endolytically to terminate their elongation
K07082
-
-
0.0000000000000000000000000000000000000000004497
171.0
View
DYD2_k127_4371947_4
Peptidoglycan hydrolase involved in the splitting of the septum during cell division
K22409
-
3.5.1.28
0.00000000000000000000003556
112.0
View
DYD2_k127_4371947_5
Could be a nuclease involved in processing of the 5'-end of pre-16S rRNA
K07447
-
-
0.0000000000000000002817
92.0
View
DYD2_k127_4371947_6
Putative transmembrane protein (PGPGW)
-
-
-
0.00000006243
61.0
View
DYD2_k127_4371947_7
SNF2 family N-terminal domain
K08282
-
2.7.11.1
0.0001124
47.0
View
DYD2_k127_447179_0
DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates
K03046
GO:0000428,GO:0005575,GO:0005622,GO:0005623,GO:0030880,GO:0032991,GO:0044424,GO:0044464,GO:0061695,GO:1902494,GO:1990234
2.7.7.6
0.0
1099.0
View
DYD2_k127_447179_1
Catalyzes the GTP-dependent ribosomal translocation step during translation elongation. During this step, the ribosome changes from the pre-translocational (PRE) to the post- translocational (POST) state as the newly formed A-site-bound peptidyl-tRNA and P-site-bound deacylated tRNA move to the P and E sites, respectively. Catalyzes the coordinated movement of the two tRNA molecules, the mRNA and conformational changes in the ribosome
K02355
-
-
4.455e-273
856.0
View
DYD2_k127_447179_10
NUDIX domain
-
-
-
0.000000000000000000000000000000000009917
141.0
View
DYD2_k127_447179_11
Forms part of the polypeptide exit tunnel
K02926
-
-
0.0000000000002182
73.0
View
DYD2_k127_447179_2
DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates
K03043
-
2.7.7.6
1.401e-225
716.0
View
DYD2_k127_447179_3
This protein promotes the GTP-dependent binding of aminoacyl-tRNA to the A-site of ribosomes during protein biosynthesis
K02358
-
-
0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008528
415.0
View
DYD2_k127_447179_4
glycolate biosynthetic process
K01091
-
3.1.3.18
0.000000000000000000000000000000000000000000000000000000000000000003391
232.0
View
DYD2_k127_447179_5
This protein promotes the GTP-dependent binding of aminoacyl-tRNA to the A-site of ribosomes during protein biosynthesis
K02358
-
-
0.0000000000000000000000000000000000000000000000000000002313
196.0
View
DYD2_k127_447179_6
Interacts with and stabilizes bases of the 16S rRNA that are involved in tRNA selection in the A site and with the mRNA backbone. Located at the interface of the 30S and 50S subunits, it traverses the body of the 30S subunit contacting proteins on the other side and probably holding the rRNA structure together. The combined cluster of proteins S8, S12 and S17 appears to hold together the shoulder and platform of the 30S subunit
K02950
-
-
0.00000000000000000000000000000000000000000000000000001641
192.0
View
DYD2_k127_447179_7
One of the primary rRNA binding proteins, it binds directly near the 3'-end of the 23S rRNA, where it nucleates assembly of the 50S subunit
K02906
-
-
0.00000000000000000000000000000000000000000000000001605
188.0
View
DYD2_k127_447179_8
One of the primary rRNA binding proteins, it binds directly to 16S rRNA where it nucleates assembly of the head domain of the 30S subunit. Is located at the subunit interface close to the decoding center, probably blocks exit of the E-site tRNA
K02992
GO:0000028,GO:0003674,GO:0003676,GO:0003723,GO:0003729,GO:0003735,GO:0005198,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0006412,GO:0006518,GO:0006807,GO:0006996,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0015935,GO:0016043,GO:0019538,GO:0019843,GO:0022607,GO:0022613,GO:0022618,GO:0022626,GO:0022627,GO:0032991,GO:0034622,GO:0034641,GO:0034645,GO:0042254,GO:0042255,GO:0042274,GO:0043043,GO:0043170,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043603,GO:0043604,GO:0043933,GO:0044085,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:0065003,GO:0070925,GO:0071704,GO:0071826,GO:0071840,GO:0097159,GO:1901363,GO:1901564,GO:1901566,GO:1901576,GO:1990904
-
0.00000000000000000000000000000000000000000000004446
174.0
View
DYD2_k127_447179_9
Involved in the binding of tRNA to the ribosomes
K02946
-
-
0.0000000000000000000000000000000000000000009609
159.0
View
DYD2_k127_4507418_0
(ABC) transporter
K06147,K12531
-
-
0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000004451
301.0
View
DYD2_k127_4507418_1
repressor
K03720
-
-
0.00000003327
58.0
View
DYD2_k127_4571643_0
Can catalyze the hydrolysis of ATP in the presence of single-stranded DNA, the ATP-dependent uptake of single-stranded DNA by duplex DNA, and the ATP-dependent hybridization of homologous single-stranded DNAs. It interacts with LexA causing its activation and leading to its autocatalytic cleavage
K03553
-
-
0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003627
487.0
View
DYD2_k127_4571643_1
type II secretion system protein E
K02652
-
-
0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002236
437.0
View
DYD2_k127_4571643_10
Nuclease that resolves Holliday junction intermediates in genetic recombination. Cleaves the cruciform structure in supercoiled DNA by nicking to strands with the same polarity at sites symmetrically opposed at the junction in the homologous arms and leaves a 5'-terminal phosphate and a 3'-terminal hydroxyl group
K01159
-
3.1.22.4
0.00000007742
54.0
View
DYD2_k127_4571643_11
Evidence 3 Function proposed based on presence of conserved amino acid motif, structural feature or limited homology
-
-
-
0.00003558
54.0
View
DYD2_k127_4571643_2
The RuvA-RuvB complex in the presence of ATP renatures cruciform structure in supercoiled DNA with palindromic sequence, indicating that it may promote strand exchange reactions in homologous recombination. RuvAB is a helicase that mediates the Holliday junction migration by localized denaturation and reannealing
K03551
-
3.6.4.12
0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002903
419.0
View
DYD2_k127_4571643_3
Type II secretion system (T2SS), protein F
K02653
-
-
0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000001889
297.0
View
DYD2_k127_4571643_4
The RuvA-RuvB complex in the presence of ATP renatures cruciform structure in supercoiled DNA with palindromic sequence, indicating that it may promote strand exchange reactions in homologous recombination. RuvAB is a helicase that mediates the Holliday junction migration by localized denaturation and reannealing. RuvA stimulates, in the presence of DNA, the weak ATPase activity of RuvB
K03550
-
3.6.4.12
0.00000000000000000000000000000005258
132.0
View
DYD2_k127_4571643_5
Type IV pilus assembly protein PilM
K02662
-
-
0.0000000000000000000000000000332
130.0
View
DYD2_k127_4571643_6
Modulates RecA activity
K03565
-
-
0.000000000000000000001151
102.0
View
DYD2_k127_4571643_7
PFAM Uncharacterised P-loop hydrolase UPF0079
K06925
-
-
0.00000000001729
66.0
View
DYD2_k127_4571643_8
general secretion pathway protein
K02456
GO:0002790,GO:0006810,GO:0008104,GO:0008150,GO:0009306,GO:0009987,GO:0015031,GO:0015833,GO:0032940,GO:0033036,GO:0042886,GO:0045184,GO:0046903,GO:0051179,GO:0051234,GO:0071702,GO:0071705
-
0.0000000003393
66.0
View
DYD2_k127_4571643_9
PFAM PRC-barrel domain
-
-
-
0.00000001309
63.0
View
DYD2_k127_4678427_0
Protein of unknown function (DUF3048) C-terminal domain
-
-
-
0.000000000000000000000000000000000000000000000000000000000000000000000002792
259.0
View
DYD2_k127_4678427_1
Catalyzes the attachment of glutamate to tRNA(Glu) in a two-step reaction glutamate is first activated by ATP to form Glu-AMP and then transferred to the acceptor end of tRNA(Glu)
K01885
-
6.1.1.17
0.00000000000000000000000000000000000000000000000000000000000000000004678
249.0
View
DYD2_k127_4678427_2
-
-
-
-
0.000000000000000000002766
96.0
View
DYD2_k127_4782755_0
Produces ATP from ADP in the presence of a proton gradient across the membrane. The catalytic sites are hosted primarily by the beta subunits
K02112
GO:0005575,GO:0005623,GO:0005886,GO:0016020,GO:0044464,GO:0071944
3.6.3.14
0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002447
579.0
View
DYD2_k127_4782755_1
Produces ATP from ADP in the presence of a proton gradient across the membrane. The alpha chain is a regulatory subunit
K02111
-
3.6.3.14
0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003775
566.0
View
DYD2_k127_4782755_2
Produces ATP from ADP in the presence of a proton gradient across the membrane. The gamma chain is believed to be important in regulating ATPase activity and the flow of protons through the CF(0) complex
K02115
-
-
0.00000000000000000000000000000000000000000000000000000000001497
216.0
View
DYD2_k127_4782755_3
ATP synthase A chain
K02108
-
-
0.0000000000000000000000000000000006644
139.0
View
DYD2_k127_4782755_4
F(1)F(0) ATP synthase produces ATP from ADP in the presence of a proton or sodium gradient. F-type ATPases consist of two structural domains, F(1) containing the extramembraneous catalytic core and F(0) containing the membrane proton channel, linked together by a central stalk and a peripheral stalk. During catalysis, ATP synthesis in the catalytic domain of F(1) is coupled via a rotary mechanism of the central stalk subunits to proton translocation
K02113
-
-
0.0000001061
58.0
View
DYD2_k127_4782755_5
Component of the F(0) channel, it forms part of the peripheral stalk, linking F(1) to F(0)
K02109
-
-
0.0001627
51.0
View
DYD2_k127_4830987_0
Polysaccharide biosynthesis protein C-terminal
K17716
-
5.1.3.2
0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002823
537.0
View
DYD2_k127_4830987_1
NAD dependent epimerase dehydratase family protein
K19068
-
1.1.1.367
0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006992
433.0
View
DYD2_k127_4830987_2
UDP-N-acetylglucosamine 2-epimerase
K01791
-
5.1.3.14
0.0000000000000000000000000000000000000000000000000000000000000004273
220.0
View
DYD2_k127_4845025_0
Heat shock 70 kDa protein
K04043
-
-
2.78e-243
767.0
View
DYD2_k127_4845025_1
Required for accurate and efficient protein synthesis under certain stress conditions. May act as a fidelity factor of the translation reaction, by catalyzing a one-codon backward translocation of tRNAs on improperly translocated ribosomes. Back- translocation proceeds from a post-translocation (POST) complex to a pre-translocation (PRE) complex, thus giving elongation factor G a second chance to translocate the tRNAs correctly. Binds to ribosomes in a GTP-dependent manner
K03596
GO:0005575,GO:0005618,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0030312,GO:0044424,GO:0044444,GO:0044464,GO:0071944
-
2.061e-210
672.0
View
DYD2_k127_4845025_2
ATP binding to DnaK triggers the release of the substrate protein, thus completing the reaction cycle. Several rounds of ATP-dependent interactions between DnaJ, DnaK and GrpE are required for fully efficient folding. Also involved, together with DnaK and GrpE, in the DNA replication of plasmids through activation of initiation proteins
K03686,K05516
-
-
0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002791
358.0
View
DYD2_k127_4845025_3
Belongs to the RimK family
K05844
-
-
0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003015
340.0
View
DYD2_k127_4845025_4
Involved in peptidoglycan biosynthesis. Transports lipid-linked peptidoglycan precursors from the inner to the outer leaflet of the cytoplasmic membrane
K03980
-
-
0.000000000000000000000000000000000000000001917
174.0
View
DYD2_k127_4845025_5
Negative regulator of class I heat shock genes (grpE- dnaK-dnaJ and groELS operons). Prevents heat-shock induction of these operons
K03705
-
-
0.0000000000000000000000001538
115.0
View
DYD2_k127_4845025_6
guanylate kinase activity
K00942,K11151,K15538
GO:0003674,GO:0003824,GO:0004385,GO:0005575,GO:0005622,GO:0005623,GO:0005634,GO:0005737,GO:0005829,GO:0006139,GO:0006163,GO:0006164,GO:0006183,GO:0006185,GO:0006725,GO:0006753,GO:0006793,GO:0006796,GO:0006807,GO:0006810,GO:0007275,GO:0008104,GO:0008150,GO:0008152,GO:0009058,GO:0009116,GO:0009117,GO:0009119,GO:0009123,GO:0009126,GO:0009132,GO:0009133,GO:0009135,GO:0009136,GO:0009141,GO:0009142,GO:0009144,GO:0009145,GO:0009150,GO:0009151,GO:0009152,GO:0009153,GO:0009161,GO:0009162,GO:0009163,GO:0009165,GO:0009167,GO:0009170,GO:0009179,GO:0009180,GO:0009182,GO:0009183,GO:0009185,GO:0009186,GO:0009188,GO:0009189,GO:0009199,GO:0009200,GO:0009201,GO:0009205,GO:0009206,GO:0009215,GO:0009225,GO:0009259,GO:0009260,GO:0009262,GO:0009263,GO:0009265,GO:0009394,GO:0009987,GO:0015031,GO:0015833,GO:0015949,GO:0016301,GO:0016310,GO:0016740,GO:0016772,GO:0016776,GO:0017144,GO:0018130,GO:0019205,GO:0019438,GO:0019637,GO:0019673,GO:0019692,GO:0019693,GO:0032501,GO:0032502,GO:0033036,GO:0034404,GO:0034436,GO:0034641,GO:0034654,GO:0040008,GO:0042278,GO:0042451,GO:0042455,GO:0042886,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0044283,GO:0044424,GO:0044444,GO:0044464,GO:0045184,GO:0046034,GO:0046037,GO:0046039,GO:0046054,GO:0046060,GO:0046066,GO:0046128,GO:0046129,GO:0046385,GO:0046390,GO:0046483,GO:0046710,GO:0046711,GO:0046939,GO:0046940,GO:0048229,GO:0048638,GO:0048856,GO:0050145,GO:0050789,GO:0050793,GO:0051179,GO:0051234,GO:0055086,GO:0065007,GO:0071702,GO:0071704,GO:0071705,GO:0072521,GO:0072522,GO:0090407,GO:1901068,GO:1901070,GO:1901135,GO:1901137,GO:1901264,GO:1901293,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576,GO:1901657,GO:1901659
2.7.4.8,3.2.1.130
0.0000000000000000000000004249
114.0
View
DYD2_k127_4845025_7
Putative ATP-dependant zinc protease
-
-
-
0.000000000000000000005482
97.0
View
DYD2_k127_4845025_8
Toxic component of a toxin-antitoxin (TA) module. An RNase
K18828
-
-
0.000000000000000000035
95.0
View
DYD2_k127_4845025_9
Participates actively in the response to hyperosmotic and heat shock by preventing the aggregation of stress-denatured proteins, in association with DnaK and GrpE. It is the nucleotide exchange factor for DnaK and may function as a thermosensor. Unfolded proteins bind initially to DnaJ
K03687
GO:0000166,GO:0000774,GO:0003674,GO:0005488,GO:0005515,GO:0008150,GO:0017076,GO:0030234,GO:0030554,GO:0036094,GO:0050790,GO:0051082,GO:0060589,GO:0060590,GO:0065007,GO:0065009,GO:0097159,GO:0098772,GO:1901265,GO:1901363
-
0.0000000000000007259
84.0
View
DYD2_k127_4914526_0
The glycine cleavage system catalyzes the degradation of glycine
K00605
-
2.1.2.10
0.000000000000000000000000000000000000000000000000000000000000000000000000000000000001034
292.0
View
DYD2_k127_4914526_1
(ABC) transporter
K06147,K06148
-
-
0.0000000000000000000000000000000000000000000000000000000000000000000000000000000001805
297.0
View
DYD2_k127_4914526_2
Helix-hairpin-helix DNA-binding motif class 1
K01247
-
3.2.2.21
0.0000000000000000000000000000000000000000001248
168.0
View
DYD2_k127_4914526_3
Part of the outer membrane protein assembly complex, which is involved in assembly and insertion of beta-barrel proteins into the outer membrane
-
-
-
0.00000000000000000000000000000000000000007163
172.0
View
DYD2_k127_4914526_4
ubiE/COQ5 methyltransferase family
-
-
-
0.0000000000000001817
79.0
View
DYD2_k127_4914526_5
endonuclease activity
-
-
-
0.0000000000000001978
81.0
View
DYD2_k127_4914526_6
Phosphate acyltransferases
-
-
-
0.0000000000001549
80.0
View
DYD2_k127_4914526_7
Transcriptional regulator, Crp Fnr family
-
-
-
0.0000000006636
68.0
View
DYD2_k127_4974744_0
Belongs to the glycosyl hydrolase 1 family
K05350
-
3.2.1.21
0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000247
362.0
View
DYD2_k127_4974744_1
MazG nucleotide pyrophosphohydrolase domain
-
-
-
0.00000000000006455
73.0
View
DYD2_k127_5117313_0
Releases the supercoiling and torsional tension of DNA, which is introduced during the DNA replication and transcription, by transiently cleaving and rejoining one strand of the DNA duplex. Introduces a single-strand break via transesterification at a target site in duplex DNA. The scissile phosphodiester is attacked by the catalytic tyrosine of the enzyme, resulting in the formation of a DNA-(5'-phosphotyrosyl)-enzyme intermediate and the expulsion of a 3'-OH DNA strand. The free DNA strand then undergoes passage around the unbroken strand, thus removing DNA supercoils. Finally, in the religation step, the DNA 3'-OH attacks the covalent intermediate to expel the active-site tyrosine and restore the DNA phosphodiester backbone
K03168
-
5.99.1.2
1.017e-261
826.0
View
DYD2_k127_5117313_1
GTPase that plays an essential role in the late steps of ribosome biogenesis
K03977
-
-
0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000447
331.0
View
DYD2_k127_5117313_2
DNA protecting protein DprA
K04096
-
-
0.00000000000000000000000000000000000000000000000000000000008837
214.0
View
DYD2_k127_5117313_3
The natural substrate for this enzyme may be peptidyl- tRNAs which drop off the ribosome during protein synthesis
K01056
-
3.1.1.29
0.000000000000000000000000000000000000000002055
163.0
View
DYD2_k127_5117313_4
Belongs to the pseudouridine synthase RsuA family
K06178,K06183
-
5.4.99.19,5.4.99.22
0.000004765
50.0
View
DYD2_k127_5146296_0
leucyl-tRNA aminoacylation
K01869
GO:0003674,GO:0003824,GO:0004812,GO:0004823,GO:0005575,GO:0005618,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005886,GO:0006082,GO:0006139,GO:0006399,GO:0006412,GO:0006418,GO:0006429,GO:0006518,GO:0006520,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0016020,GO:0016070,GO:0016874,GO:0016875,GO:0019538,GO:0019752,GO:0030312,GO:0034641,GO:0034645,GO:0034660,GO:0040007,GO:0043038,GO:0043039,GO:0043043,GO:0043170,GO:0043436,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044281,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0071704,GO:0071944,GO:0090304,GO:0140098,GO:0140101,GO:1901360,GO:1901564,GO:1901566,GO:1901576
6.1.1.4
3.037e-212
670.0
View
DYD2_k127_5146296_1
Involved in cell wall formation. Catalyzes the final step in the synthesis of UDP-N-acetylmuramoyl-pentapeptide, the precursor of murein
K01929
-
6.3.2.10
0.0000000000000000000000000000000000000000000000000000000000000000000001264
255.0
View
DYD2_k127_515638_0
Catalyzes the attachment of threonine to tRNA(Thr) in a two-step reaction L-threonine is first activated by ATP to form Thr-AMP and then transferred to the acceptor end of tRNA(Thr)
K01868
-
6.1.1.3
0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006745
605.0
View
DYD2_k127_515638_1
PFAM Magnesium chelatase, ChlI subunit
K07391
-
-
0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000863
431.0
View
DYD2_k127_515638_10
Ribosomal protein L35
K02916
GO:0003674,GO:0003735,GO:0005198,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0015934,GO:0022625,GO:0022626,GO:0032991,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:1990904
-
0.00000000005293
64.0
View
DYD2_k127_515638_11
transcriptional
-
-
-
0.00000000007863
70.0
View
DYD2_k127_515638_12
EamA-like transporter family
K08978
-
-
0.0001404
53.0
View
DYD2_k127_515638_2
Catalyzes the transfer of a dimethylallyl group onto the adenine at position 37 in tRNAs that read codons beginning with uridine, leading to the formation of N6-(dimethylallyl)adenosine (i(6)A)
K00791
GO:0003674,GO:0003824,GO:0006139,GO:0006396,GO:0006399,GO:0006400,GO:0006725,GO:0006807,GO:0008033,GO:0008150,GO:0008152,GO:0009451,GO:0009987,GO:0010467,GO:0016070,GO:0016740,GO:0016765,GO:0034470,GO:0034641,GO:0034660,GO:0043170,GO:0043412,GO:0044237,GO:0044238,GO:0046483,GO:0052381,GO:0071704,GO:0090304,GO:0140098,GO:0140101,GO:1901360
2.5.1.75
0.00000000000000000000000000000000000000000000000000000000004231
215.0
View
DYD2_k127_515638_3
IF-3 binds to the 30S ribosomal subunit and shifts the equilibrum between 70S ribosomes and their 50S and 30S subunits in favor of the free subunits, thus enhancing the availability of 30S subunits on which protein synthesis initiation begins
K02520
GO:0003674,GO:0003676,GO:0003723,GO:0003743,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006412,GO:0006413,GO:0006518,GO:0006807,GO:0006996,GO:0008135,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0016020,GO:0016043,GO:0019538,GO:0022411,GO:0032790,GO:0032984,GO:0032988,GO:0034641,GO:0034645,GO:0043021,GO:0043022,GO:0043043,GO:0043170,GO:0043603,GO:0043604,GO:0043933,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044424,GO:0044444,GO:0044464,GO:0044877,GO:0071704,GO:0071826,GO:0071840,GO:0097159,GO:1901363,GO:1901564,GO:1901566,GO:1901576,GO:1903008
-
0.00000000000000000000000000000000000000004528
158.0
View
DYD2_k127_515638_4
Peptidase M50
-
-
-
0.0000000000000000000000000000002294
130.0
View
DYD2_k127_515638_5
Binds directly to 23S ribosomal RNA and is necessary for the in vitro assembly process of the 50S ribosomal subunit. It is not involved in the protein synthesizing functions of that subunit
K02887
GO:0000027,GO:0000900,GO:0003674,GO:0003676,GO:0003723,GO:0003729,GO:0003735,GO:0005198,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0006355,GO:0006412,GO:0006417,GO:0006518,GO:0006807,GO:0006996,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009889,GO:0009890,GO:0009892,GO:0009987,GO:0010467,GO:0010468,GO:0010556,GO:0010558,GO:0010605,GO:0010608,GO:0010629,GO:0015934,GO:0016043,GO:0017148,GO:0019219,GO:0019222,GO:0019538,GO:0019843,GO:0022607,GO:0022613,GO:0022618,GO:0022625,GO:0022626,GO:0030371,GO:0031323,GO:0031324,GO:0031326,GO:0031327,GO:0032268,GO:0032269,GO:0032991,GO:0034248,GO:0034249,GO:0034622,GO:0034641,GO:0034645,GO:0042254,GO:0042255,GO:0042273,GO:0043043,GO:0043170,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043603,GO:0043604,GO:0043933,GO:0044085,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:0045182,GO:0048519,GO:0048523,GO:0050789,GO:0050794,GO:0051171,GO:0051172,GO:0051246,GO:0051248,GO:0051252,GO:0060255,GO:0065003,GO:0065007,GO:0070180,GO:0070925,GO:0071704,GO:0071826,GO:0071840,GO:0080090,GO:0090079,GO:0097159,GO:1901363,GO:1901564,GO:1901566,GO:1901576,GO:1903506,GO:1990904,GO:2000112,GO:2000113,GO:2001141
-
0.00000000000000000000000000009591
118.0
View
DYD2_k127_515638_6
PFAM ribonuclease H
K03469,K06864
-
3.1.26.4
0.000000000000000000000000002546
121.0
View
DYD2_k127_515638_7
6-O-methylguanine DNA methyltransferase, DNA binding domain
K00567,K07443
GO:0003674,GO:0003676,GO:0003677,GO:0003684,GO:0005488,GO:0005515,GO:0019899,GO:0097159,GO:1901363
2.1.1.63
0.0000000000000000000002959
100.0
View
DYD2_k127_515638_8
Beta-lactamase superfamily domain
-
-
-
0.0000000000000000000082
100.0
View
DYD2_k127_515638_9
Belongs to the bacterial ribosomal protein bL28 family
K02902
GO:0003674,GO:0003735,GO:0005198
-
0.00000000002376
66.0
View
DYD2_k127_5199267_0
Belongs to the NAD(P)-dependent epimerase dehydratase family. dTDP-glucose dehydratase subfamily
K01710
-
4.2.1.46
0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005849
523.0
View
DYD2_k127_5199267_1
Catalyzes the formation of dTDP-glucose, from dTTP and glucose 1-phosphate, as well as its pyrophosphorolysis
K00973
-
2.7.7.24
0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000147
433.0
View
DYD2_k127_5199267_2
Catalyzes the reduction of dTDP-6-deoxy-L-lyxo-4- hexulose to yield dTDP-L-rhamnose
K00067,K01790
-
1.1.1.133,5.1.3.13
0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001306
312.0
View
DYD2_k127_5199267_3
Eukaryotic phosphomannomutase
-
-
-
0.00000000000000000000000000000000000000000000000000000000000000000001106
241.0
View
DYD2_k127_5199267_4
PFAM Glycosyl transferase, family 2
K21304
GO:0003674,GO:0003824,GO:0016740
2.4.1.153
0.000000000000000000000000000000000000000000000002074
181.0
View
DYD2_k127_5199267_5
dTDP-4-dehydrorhamnose 3,5-epimerase
K01790
-
5.1.3.13
0.000000000000000000000000000000000003382
145.0
View
DYD2_k127_5199267_6
23S rRNA-intervening sequence protein
-
-
-
0.00000000001275
70.0
View
DYD2_k127_5320821_0
One of the primary rRNA binding proteins. Required for association of the 30S and 50S subunits to form the 70S ribosome, for tRNA binding and peptide bond formation. It has been suggested to have peptidyltransferase activity
K02886
-
-
0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000002275
299.0
View
DYD2_k127_5320821_1
One of the early assembly proteins it binds 23S rRNA. One of the proteins that surrounds the polypeptide exit tunnel on the outside of the ribosome. Forms the main docking site for trigger factor binding to the ribosome
K02892
GO:0000027,GO:0003674,GO:0003676,GO:0003723,GO:0003735,GO:0005198,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0005886,GO:0006412,GO:0006518,GO:0006807,GO:0006996,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0015934,GO:0016020,GO:0016043,GO:0019538,GO:0022607,GO:0022613,GO:0022618,GO:0022625,GO:0022626,GO:0032991,GO:0034622,GO:0034641,GO:0034645,GO:0040007,GO:0042254,GO:0042255,GO:0042273,GO:0043043,GO:0043170,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043603,GO:0043604,GO:0043933,GO:0044085,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:0065003,GO:0070925,GO:0071704,GO:0071826,GO:0071840,GO:0071944,GO:0097159,GO:1901363,GO:1901564,GO:1901566,GO:1901576,GO:1990904
-
0.000000000001366
71.0
View
DYD2_k127_5320821_2
Forms part of the polypeptide exit tunnel
K02926
GO:0003674,GO:0003676,GO:0003723,GO:0003735,GO:0005198,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0006412,GO:0006518,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0019538,GO:0022626,GO:0032991,GO:0034641,GO:0034645,GO:0043043,GO:0043170,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044424,GO:0044444,GO:0044445,GO:0044464,GO:0071704,GO:0097159,GO:1901363,GO:1901564,GO:1901566,GO:1901576,GO:1990904
-
0.000000000004958
71.0
View
DYD2_k127_5320821_3
Helix-hairpin-helix domain
K02347
-
-
0.000000006279
59.0
View
DYD2_k127_541511_0
type III restriction protein res subunit
K01153
-
3.1.21.3
4.898e-256
811.0
View
DYD2_k127_541511_1
Type I restriction-modification system
K03427
-
2.1.1.72
0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009295
597.0
View
DYD2_k127_541511_2
A helicase nuclease that prepares dsDNA breaks (DSB) for recombinational DNA repair. Binds to DSBs and unwinds DNA via a highly rapid and processive ATP-dependent bidirectional helicase activity. Unwinds dsDNA until it encounters a Chi (crossover hotspot instigator) sequence from the 3' direction. Cuts ssDNA a few nucleotides 3' to the Chi site. The properties and activities of the enzyme are changed at Chi. The Chi-altered holoenzyme produces a long 3'-ssDNA overhang and facilitates RecA-binding to the ssDNA for homologous DNA recombination and repair. Holoenzyme degrades any linearized DNA that is unable to undergo homologous recombination. In the holoenzyme this subunit has ssDNA-dependent ATPase and 5'-3' helicase activity. When added to pre-assembled RecBC greatly stimulates nuclease activity and augments holoenzyme processivity. Negatively regulates the RecA-loading ability of RecBCD
K03657,K15255
-
3.6.4.12
0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002857
436.0
View
DYD2_k127_541511_3
AAA domain, putative AbiEii toxin, Type IV TA system
-
-
-
0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007062
390.0
View
DYD2_k127_541511_4
Type I restriction modification DNA specificity domain
-
-
-
0.0000000000000000000000000000000000000000000000000000000000000000001768
244.0
View
DYD2_k127_541511_5
endonuclease activity
-
-
-
0.000000000000000001358
90.0
View
DYD2_k127_541511_6
Uncharacterized protein conserved in bacteria (DUF2188)
-
-
-
0.0000000000000006298
81.0
View
DYD2_k127_541511_7
Represses a number of genes involved in the response to DNA damage (SOS response), including recA and lexA. In the presence of single-stranded DNA, RecA interacts with LexA causing an autocatalytic cleavage which disrupts the DNA-binding part of LexA, leading to derepression of the SOS regulon and eventually DNA repair
K01356
-
3.4.21.88
0.0000000000242
72.0
View
DYD2_k127_541511_8
-
-
-
-
0.000000001376
64.0
View
DYD2_k127_541511_9
-
-
-
-
0.000000007501
65.0
View
DYD2_k127_5527026_0
PFAM sodium hydrogen exchanger
-
-
-
0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001134
362.0
View
DYD2_k127_5557215_0
Digests double-stranded RNA. Involved in the processing of primary rRNA transcript to yield the immediate precursors to the large and small rRNAs (23S and 16S). Processes some mRNAs, and tRNAs when they are encoded in the rRNA operon. Processes pre- crRNA and tracrRNA of type II CRISPR loci if present in the organism
K03685
-
3.1.26.3
0.0000000000000000000000000000000000000000000000002924
184.0
View
DYD2_k127_5557215_1
Belongs to the class-I aminoacyl-tRNA synthetase family
K01869
-
6.1.1.4
0.00000000000000000000000000000000000000003346
159.0
View
DYD2_k127_5557215_2
Involved in transcription antitermination. Required for transcription of ribosomal RNA (rRNA) genes. Binds specifically to the boxA antiterminator sequence of the ribosomal RNA (rrn) operons
K03625
-
-
0.0000000000000000000000009598
109.0
View
DYD2_k127_5557215_3
Belongs to the Nudix hydrolase family
-
-
-
0.0000000000000001524
85.0
View
DYD2_k127_5557215_4
Belongs to the bacterial ribosomal protein bS16 family
K02959
-
-
0.000000000000001156
84.0
View
DYD2_k127_5557215_5
KH domain
K06960
-
-
0.000000000000001411
82.0
View
DYD2_k127_5557215_6
Domain of unknown function (DUF4352)
-
-
-
0.00000001188
64.0
View
DYD2_k127_5593139_0
Type IV secretory pathway, VirB4
-
-
-
0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005832
412.0
View
DYD2_k127_5593139_1
multi-organism process
-
-
-
0.00000000002296
74.0
View
DYD2_k127_5630338_0
Belongs to the pyruvate kinase family
K00873
-
2.7.1.40
0.000000000000000000000000000000000000000000000000000000000000000000000004941
256.0
View
DYD2_k127_5630338_1
Phosphoglycerate kinase
K00927
-
2.7.2.3
0.0000000000000000000000000000000000000000000000852
175.0
View
DYD2_k127_5645862_0
Bacterial phospho-glucose isomerase C-terminal SIS domain
K15916
-
5.3.1.8,5.3.1.9
0.00000000000000000000000000000000000000000000000000000000000001263
228.0
View
DYD2_k127_5645862_1
Belongs to the CDS family
-
-
-
0.0000000000005771
73.0
View
DYD2_k127_5778866_0
Tryptophanyl-tRNA synthetase
K01867
GO:0005575,GO:0005623,GO:0005886,GO:0008150,GO:0016020,GO:0040007,GO:0044464,GO:0071944
6.1.1.2
0.00000000000000000000000000000000000000000000000000000000000000000000000000004495
271.0
View
DYD2_k127_5778866_1
DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates
K03040
-
2.7.7.6
0.0000000000000000000000000000000000000000000000000000000000000000002384
240.0
View
DYD2_k127_5778866_2
One of the primary rRNA binding proteins, it binds directly to 16S rRNA where it nucleates assembly of the body of the 30S subunit
K02986
-
-
0.00000000000000000000000000000000000000000000000003945
186.0
View
DYD2_k127_5778866_3
This protein is one of the early assembly proteins of the 50S ribosomal subunit, although it is not seen to bind rRNA by itself. It is important during the early stages of 50S assembly
K02871
GO:0003674,GO:0003676,GO:0003723,GO:0003729,GO:0003735,GO:0005198,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0006412,GO:0006518,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0015934,GO:0019538,GO:0022625,GO:0022626,GO:0032991,GO:0034641,GO:0034645,GO:0043043,GO:0043170,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:0071704,GO:0097159,GO:1901363,GO:1901564,GO:1901566,GO:1901576,GO:1990904
-
0.00000000000000000000000000000000000000000001158
166.0
View
DYD2_k127_5778866_4
Located at the top of the head of the 30S subunit, it contacts several helices of the 16S rRNA. In the 70S ribosome it contacts the 23S rRNA (bridge B1a) and protein L5 of the 50S subunit (bridge B1b), connecting the 2 subunits
K02952
-
-
0.00000000000000000000000000000000000004661
146.0
View
DYD2_k127_5778866_5
Located on the platform of the 30S subunit, it bridges several disparate RNA helices of the 16S rRNA. Forms part of the Shine-Dalgarno cleft in the 70S ribosome
K02948
-
-
0.0000000000000000000000000000000000001971
144.0
View
DYD2_k127_5778866_6
Belongs to the universal ribosomal protein uS9 family
K02996
GO:0000462,GO:0003674,GO:0003676,GO:0003723,GO:0003735,GO:0005198,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0006139,GO:0006364,GO:0006396,GO:0006412,GO:0006518,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0015935,GO:0016070,GO:0016072,GO:0019538,GO:0022613,GO:0022626,GO:0022627,GO:0030490,GO:0032991,GO:0034470,GO:0034641,GO:0034645,GO:0034660,GO:0042254,GO:0042274,GO:0043043,GO:0043170,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043603,GO:0043604,GO:0044085,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:0046483,GO:0071704,GO:0071840,GO:0090304,GO:0097159,GO:1901360,GO:1901363,GO:1901564,GO:1901566,GO:1901576,GO:1990904
-
0.000000000000000000000000000006272
123.0
View
DYD2_k127_5778866_7
Ribosomal protein L17
K02879
GO:0003674,GO:0003735,GO:0005198,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0015934,GO:0022625,GO:0022626,GO:0032991,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:1990904
-
0.0000000000000000000000000005924
119.0
View
DYD2_k127_5778866_8
One of the essential components for the initiation of protein synthesis. Stabilizes the binding of IF-2 and IF-3 on the 30S subunit to which N-formylmethionyl-tRNA(fMet) subsequently binds. Helps modulate mRNA selection, yielding the 30S pre- initiation complex (PIC). Upon addition of the 50S ribosomal subunit IF-1, IF-2 and IF-3 are released leaving the mature 70S translation initation complex
K02518
GO:0001871,GO:0003674,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0009986,GO:0030246,GO:0030247,GO:0043021,GO:0043022,GO:0044424,GO:0044444,GO:0044464,GO:0044877,GO:2001065
-
0.000000000000000000001105
94.0
View
DYD2_k127_5778866_9
Belongs to the bacterial ribosomal protein bL36 family
K02919
-
-
0.0000000001375
63.0
View
DYD2_k127_58467_0
PFAM tRNA synthetase, class II (G, H, P and S)
K01892
-
6.1.1.21
0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004445
335.0
View
DYD2_k127_58467_1
Involved in protein export. Acts as a chaperone by maintaining the newly synthesized protein in an open conformation. Functions as a peptidyl-prolyl cis-trans isomerase
K03545
GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0044424,GO:0044464
-
0.000000000000000000000000000000000000000000000000000007187
205.0
View
DYD2_k127_58467_2
RNA methyltransferase, RsmD family
-
-
-
0.00000000000000000000000007481
113.0
View
DYD2_k127_58467_3
Succinylglutamate desuccinylase / Aspartoacylase family
K05526
-
3.5.1.96
0.000000000000000001897
95.0
View
DYD2_k127_5861592_0
A type II topoisomerase that negatively supercoils closed circular double-stranded (ds) DNA in an ATP-dependent manner to modulate DNA topology and maintain chromosomes in an underwound state. Negative supercoiling favors strand separation, and DNA replication, transcription, recombination and repair, all of which involve strand separation. Also able to catalyze the interconversion of other topological isomers of dsDNA rings, including catenanes and knotted rings. Type II topoisomerases break and join 2 DNA strands simultaneously in an ATP-dependent manner
K02469
-
5.99.1.3
3.461e-275
870.0
View
DYD2_k127_5861592_1
A type II topoisomerase that negatively supercoils closed circular double-stranded (ds) DNA in an ATP-dependent manner to modulate DNA topology and maintain chromosomes in an underwound state. Negative supercoiling favors strand separation, and DNA replication, transcription, recombination and repair, all of which involve strand separation. Also able to catalyze the interconversion of other topological isomers of dsDNA rings, including catenanes and knotted rings. Type II topoisomerases break and join 2 DNA strands simultaneously in an ATP-dependent manner
K02470
GO:0003674,GO:0003824,GO:0003916,GO:0003918,GO:0005575,GO:0006139,GO:0006259,GO:0006265,GO:0006725,GO:0006807,GO:0006996,GO:0007059,GO:0008094,GO:0008150,GO:0008152,GO:0009295,GO:0009987,GO:0016043,GO:0016462,GO:0016787,GO:0016817,GO:0016818,GO:0016853,GO:0016887,GO:0017111,GO:0034641,GO:0042623,GO:0043170,GO:0044237,GO:0044238,GO:0044260,GO:0046483,GO:0051276,GO:0061505,GO:0071103,GO:0071704,GO:0071840,GO:0090304,GO:0140097,GO:1901360
5.99.1.3
5.408e-236
747.0
View
DYD2_k127_5861592_2
helicase activity
-
-
-
0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007895
354.0
View
DYD2_k127_5861592_3
-
-
-
-
0.0000000000000000000000000000000001722
135.0
View
DYD2_k127_5861592_4
-
-
-
-
0.000000000002366
72.0
View
DYD2_k127_5861592_5
-
-
-
-
0.000000000007118
67.0
View
DYD2_k127_5861592_6
-
-
-
-
0.0000008746
52.0
View
DYD2_k127_5940896_0
it binds specifically double-stranded DNA at a 9 bp consensus (dnaA box) 5'-TTATC CA A CA A-3'. DnaA binds to ATP and to acidic phospholipids
K02313
GO:0003674,GO:0003676,GO:0003677,GO:0003688,GO:0003690,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005886,GO:0006139,GO:0006259,GO:0006260,GO:0006261,GO:0006270,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0016020,GO:0034641,GO:0034645,GO:0042802,GO:0043170,GO:0043565,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044424,GO:0044464,GO:0046483,GO:0071704,GO:0071944,GO:0090304,GO:0097159,GO:1901360,GO:1901363,GO:1901576,GO:1990837
-
0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008427
391.0
View
DYD2_k127_5940896_1
Confers DNA tethering and processivity to DNA polymerases and other proteins. Acts as a clamp, forming a ring around DNA (a reaction catalyzed by the clamp-loading complex) which diffuses in an ATP-independent manner freely and bidirectionally along dsDNA. Initially characterized for its ability to contact the catalytic subunit of DNA polymerase III (Pol III), a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria
K02338
-
2.7.7.7
0.000000000000000000000000000000000000000000000000000000000000000001117
241.0
View
DYD2_k127_5940896_2
it is required for DNA replication and normal SOS inducibility. RecF binds preferentially to single-stranded, linear DNA. It also seems to bind ATP
K03629
-
-
0.0000000000000000000000000000000000000000000000003774
189.0
View
DYD2_k127_5940896_3
GDSL-like Lipase/Acylhydrolase
-
GO:0003674,GO:0003824,GO:0004806,GO:0005575,GO:0005576,GO:0006629,GO:0006638,GO:0006639,GO:0006641,GO:0008150,GO:0008152,GO:0009056,GO:0009987,GO:0016042,GO:0016298,GO:0016787,GO:0016788,GO:0019433,GO:0044237,GO:0044238,GO:0044242,GO:0044248,GO:0044255,GO:0046461,GO:0046464,GO:0046486,GO:0046503,GO:0052689,GO:0071704,GO:1901575
-
0.00000000000000000644
98.0
View
DYD2_k127_5940896_4
PFAM Single-stranded nucleic acid binding R3H
K06346
-
-
0.0000000000000008743
84.0
View
DYD2_k127_5940896_5
Membrane protein insertase, YidC Oxa1 family
K03217
-
-
0.000000000000003073
86.0
View
DYD2_k127_5940896_6
Belongs to the bacterial ribosomal protein bL34 family
K02914
-
-
0.000000000006014
66.0
View
DYD2_k127_5940896_7
PFAM S23 ribosomal protein
-
-
-
0.00000000001942
69.0
View
DYD2_k127_5940896_8
Peptidoglycan-binding domain 1 protein
-
-
-
0.00000000004501
75.0
View
DYD2_k127_5940896_9
RNaseP catalyzes the removal of the 5'-leader sequence from pre-tRNA to produce the mature 5'-terminus. It can also cleave other RNA substrates such as 4.5S RNA. The protein component plays an auxiliary but essential role in vivo by binding to the 5'-leader sequence and broadening the substrate specificity of the ribozyme
K03536
-
3.1.26.5
0.000000000237
66.0
View
DYD2_k127_6100162_0
Mur ligase family, catalytic domain
-
-
-
0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009793
332.0
View
DYD2_k127_6100162_1
tRNA synthetase, class II (D, K and N)
K01893
-
6.1.1.22
0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006808
326.0
View
DYD2_k127_6100162_2
Catalyzes the synthesis of 5,6-dihydrouridine (D), a modified base found in the D-loop of most tRNAs, via the reduction of the C5-C6 double bond in target uridines
-
-
-
0.000000000000000000000000000000000000000000000000000000000000000000000000000000000001901
289.0
View
DYD2_k127_6100162_3
MazG nucleotide pyrophosphohydrolase domain
-
-
-
0.00000000000000000000001136
104.0
View
DYD2_k127_6100162_4
-
-
-
-
0.000000002311
61.0
View
DYD2_k127_6113175_0
Catalyzes the ATP-dependent amination of UTP to CTP with either L-glutamine or ammonia as the source of nitrogen. Regulates intracellular CTP levels through interactions with the four ribonucleotide triphosphates
K01937
-
6.3.4.2
0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000763
563.0
View
DYD2_k127_6113175_1
Peptide chain release factor 2 directs the termination of translation in response to the peptide chain termination codons UGA and UAA
K02836
-
-
0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007184
337.0
View
DYD2_k127_6113175_10
Putative RNA methylase family UPF0020
-
-
-
0.000000000000000000006759
106.0
View
DYD2_k127_6113175_11
Belongs to the bacterial ribosomal protein bL27 family
K02899
GO:0003674,GO:0003735,GO:0005198,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0015934,GO:0022625,GO:0022626,GO:0032991,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:1990904
-
0.000000000000008132
77.0
View
DYD2_k127_6113175_12
Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase
-
-
-
0.00000000000004781
77.0
View
DYD2_k127_6113175_13
positive regulation of sensory perception of pain
-
GO:0003674,GO:0003824,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005739,GO:0005740,GO:0005743,GO:0006464,GO:0006479,GO:0006807,GO:0008150,GO:0008152,GO:0008168,GO:0008170,GO:0008213,GO:0008276,GO:0008757,GO:0009987,GO:0016020,GO:0016278,GO:0016279,GO:0016740,GO:0016741,GO:0018022,GO:0018193,GO:0018205,GO:0019538,GO:0019866,GO:0030061,GO:0031090,GO:0031644,GO:0031646,GO:0031966,GO:0031967,GO:0031975,GO:0032259,GO:0036211,GO:0043170,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0043412,GO:0043414,GO:0044057,GO:0044237,GO:0044238,GO:0044260,GO:0044267,GO:0044422,GO:0044424,GO:0044425,GO:0044429,GO:0044444,GO:0044446,GO:0044455,GO:0044464,GO:0048518,GO:0050789,GO:0051239,GO:0051240,GO:0051930,GO:0051931,GO:0065007,GO:0071704,GO:0140096,GO:1901564,GO:1904058
-
0.0000000000004509
76.0
View
DYD2_k127_6113175_14
Belongs to the peptidase M16 family
-
-
-
0.000000171
63.0
View
DYD2_k127_6113175_15
PFAM ATP-binding region ATPase domain protein, histidine kinase A domain protein
-
-
-
0.00003945
54.0
View
DYD2_k127_6113175_2
cell division ATP-binding protein FtsE
K09812
-
-
0.00000000000000000000000000000000000000000000000000000000000000000000000000000002303
273.0
View
DYD2_k127_6113175_3
Belongs to the peptidase S41A family
K03797
GO:0003674,GO:0003824,GO:0004175,GO:0005575,GO:0005623,GO:0006508,GO:0006807,GO:0007154,GO:0007165,GO:0008150,GO:0008152,GO:0008233,GO:0009987,GO:0016787,GO:0019538,GO:0023052,GO:0030288,GO:0030313,GO:0031975,GO:0042597,GO:0043170,GO:0044238,GO:0044464,GO:0050789,GO:0050794,GO:0050896,GO:0051716,GO:0065007,GO:0070011,GO:0071704,GO:0140096,GO:1901564
3.4.21.102
0.00000000000000000000000000000000000000000000000000000000000000000000000006908
263.0
View
DYD2_k127_6113175_4
Bidirectionally degrades single-stranded DNA into large acid-insoluble oligonucleotides, which are then degraded further into small acid-soluble oligonucleotides
K03601
-
3.1.11.6
0.00000000000000000000000000000000000000000000000000001221
204.0
View
DYD2_k127_6113175_5
Part of the Sec protein translocase complex. Interacts with the SecYEG preprotein conducting channel. Has a central role in coupling the hydrolysis of ATP to the transfer of proteins into and across the cell membrane, serving as an ATP-driven molecular motor driving the stepwise translocation of polypeptide chains across the membrane
K03070
GO:0000166,GO:0003674,GO:0003824,GO:0005215,GO:0005488,GO:0005524,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005886,GO:0005887,GO:0006810,GO:0008104,GO:0008144,GO:0008150,GO:0008320,GO:0008565,GO:0015031,GO:0015399,GO:0015405,GO:0015440,GO:0015450,GO:0015462,GO:0015833,GO:0016020,GO:0016021,GO:0016462,GO:0016787,GO:0016817,GO:0016818,GO:0016887,GO:0017076,GO:0017111,GO:0022804,GO:0022857,GO:0022884,GO:0030554,GO:0031224,GO:0031226,GO:0031522,GO:0032553,GO:0032555,GO:0032559,GO:0032991,GO:0033036,GO:0033220,GO:0035639,GO:0036094,GO:0042623,GO:0042626,GO:0042886,GO:0042887,GO:0043167,GO:0043168,GO:0043492,GO:0043952,GO:0044424,GO:0044425,GO:0044444,GO:0044459,GO:0044464,GO:0045184,GO:0051179,GO:0051234,GO:0055085,GO:0071702,GO:0071705,GO:0071806,GO:0071944,GO:0097159,GO:0097367,GO:1901265,GO:1901363,GO:1904680
-
0.0000000000000000000000000000000000000003595
160.0
View
DYD2_k127_6113175_6
Part of the ABC transporter FtsEX involved in asymmetric cellular division facilitating the initiation of sporulation
K09811
-
-
0.00000000000000000000001022
112.0
View
DYD2_k127_6113175_7
lysyltransferase activity
K07027,K14205
GO:0005575,GO:0005623,GO:0005886,GO:0016020,GO:0044464,GO:0071944
2.3.2.3
0.0000000000000000000003251
108.0
View
DYD2_k127_6113175_8
response regulator receiver
K02488
-
2.7.7.65
0.0000000000000000000003779
100.0
View
DYD2_k127_6113175_9
Peptidase, M23
K21471
-
-
0.000000000000000000001114
108.0
View
DYD2_k127_6209549_1
Glycosyl transferase
-
-
-
0.0000000000000000000000000000000002989
144.0
View
DYD2_k127_6209549_2
the 2 termini fold to resemble tRNA(Ala) and it encodes a tag peptide , a short internal open reading frame. During trans-translation Ala- aminoacylated tmRNA acts like a tRNA, entering the A-site of stalled ribosomes, displacing the stalled mRNA. The ribosome then switches to translate the ORF on the tmRNA
K03664
GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0044424,GO:0044444,GO:0044464
-
0.00000000000000000000000009099
112.0
View
DYD2_k127_6209549_3
ATP:corrinoid adenosyltransferase BtuR/CobO/CobP
K19221
-
2.5.1.17
0.000000000000000003052
90.0
View
DYD2_k127_6209549_4
GIY-YIG catalytic domain protein
K07461
-
-
0.000000000000001379
80.0
View
DYD2_k127_6209549_5
Nudix hydrolase
K01823
GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0044424,GO:0044444,GO:0044464
5.3.3.2
0.000000000000002004
83.0
View
DYD2_k127_6209549_6
AAA domain
-
-
-
0.0002282
50.0
View
DYD2_k127_6220538_0
HAD-superfamily subfamily IB hydrolase
-
-
-
0.000000000000000000000000000001021
130.0
View
DYD2_k127_6220538_1
hydrolases or acyltransferases (alpha beta hydrolase superfamily)
-
-
-
0.000000000000007493
85.0
View
DYD2_k127_6344263_0
tRNA synthetases class II (A)
-
-
-
0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001293
444.0
View
DYD2_k127_6344263_1
Cell division protein FtsA
-
-
-
0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000001934
298.0
View
DYD2_k127_6344263_2
Catalyzes the attachment of alanine to tRNA(Ala) in a two-step reaction alanine is first activated by ATP to form Ala- AMP and then transferred to the acceptor end of tRNA(Ala). Also edits incorrectly charged Ser-tRNA(Ala) and Gly-tRNA(Ala) via its editing domain
K01872
GO:0003674,GO:0003824,GO:0004812,GO:0004813,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006082,GO:0006139,GO:0006396,GO:0006399,GO:0006400,GO:0006412,GO:0006418,GO:0006419,GO:0006518,GO:0006520,GO:0006725,GO:0006807,GO:0008033,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009451,GO:0009987,GO:0010467,GO:0016070,GO:0016597,GO:0016874,GO:0016875,GO:0019538,GO:0019752,GO:0031406,GO:0034470,GO:0034641,GO:0034645,GO:0034660,GO:0036094,GO:0043038,GO:0043039,GO:0043043,GO:0043167,GO:0043168,GO:0043170,GO:0043177,GO:0043412,GO:0043436,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044281,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0071704,GO:0090304,GO:0140098,GO:0140101,GO:1901360,GO:1901564,GO:1901566,GO:1901576
6.1.1.7
0.00000000000000000000000000000005251
141.0
View
DYD2_k127_6344263_3
Belongs to the Nudix hydrolase family
-
-
-
0.00000001913
63.0
View
DYD2_k127_6435585_0
cysteine-tRNA ligase activity
K01883
GO:0000166,GO:0003674,GO:0003824,GO:0004812,GO:0004817,GO:0005488,GO:0005524,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006082,GO:0006139,GO:0006399,GO:0006412,GO:0006418,GO:0006423,GO:0006518,GO:0006520,GO:0006725,GO:0006807,GO:0008144,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0016070,GO:0016874,GO:0016875,GO:0017076,GO:0019538,GO:0019752,GO:0030554,GO:0032553,GO:0032555,GO:0032559,GO:0034641,GO:0034645,GO:0034660,GO:0035639,GO:0036094,GO:0043038,GO:0043039,GO:0043043,GO:0043167,GO:0043168,GO:0043170,GO:0043436,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044281,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0071704,GO:0090304,GO:0097159,GO:0097367,GO:0140098,GO:0140101,GO:1901265,GO:1901360,GO:1901363,GO:1901564,GO:1901566,GO:1901576
6.1.1.16
0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002309
428.0
View
DYD2_k127_6435585_1
May play a role in DNA repair. It seems to be involved in an RecBC-independent recombinational process of DNA repair. It may act with RecF and RecO
K06187
-
-
0.000000000000000000000000000000000000000001652
160.0
View
DYD2_k127_6435585_2
PFAM phosphoesterase, RecJ domain protein
K06881
-
3.1.13.3,3.1.3.7
0.00000000000000000000000523
113.0
View
DYD2_k127_6474245_0
Belongs to the helicase family. UvrD subfamily
K03657
-
3.6.4.12
0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000452
387.0
View
DYD2_k127_6474245_1
Belongs to the DEAD box helicase family
K11927
-
3.6.4.13
0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000002157
301.0
View
DYD2_k127_6474245_2
endonuclease activity
K03654,K03657,K06877,K07451
-
3.6.4.12
0.00000000000000000000000000000000000000000000000000000002064
221.0
View
DYD2_k127_6474245_3
Involved in the import of queuosine (Q) precursors, required for Q precursor salvage
K09125
-
-
0.00003934
46.0
View
DYD2_k127_6512211_0
D-isomer specific 2-hydroxyacid dehydrogenase catalytic region
K00015
-
1.1.1.26
0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000001539
299.0
View
DYD2_k127_6512211_1
COG0277 FAD FMN-containing dehydrogenases
K00104
-
1.1.3.15
0.000000000000000000000000000000000000000000000000000000000000000000000000000000000003803
299.0
View
DYD2_k127_6512211_2
NUDIX domain
K03574
-
3.6.1.55
0.000000000000000000000000000000002875
133.0
View
DYD2_k127_6512211_3
dephospho-CoA kinase activity
-
-
-
0.00000000000000000000000000000003097
131.0
View
DYD2_k127_6512211_4
Cytochrome C biogenesis protein
-
-
-
0.00000000000000000000000002416
119.0
View
DYD2_k127_6512211_5
DNA-binding transcription factor activity
K03892
-
-
0.000000001106
64.0
View
DYD2_k127_6512211_6
-
-
-
-
0.0009522
42.0
View
DYD2_k127_6541352_0
protein secretion by the type IV secretion system
K03201
-
-
0.0000000000008181
82.0
View
DYD2_k127_6553749_0
Belongs to the glyceraldehyde-3-phosphate dehydrogenase family
K00134
-
1.2.1.12
0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008743
403.0
View
DYD2_k127_6553749_1
phenylalanyl-tRNA synthetase, beta subunit
K01890
GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006082,GO:0006139,GO:0006399,GO:0006412,GO:0006418,GO:0006432,GO:0006518,GO:0006520,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009328,GO:0009987,GO:0010467,GO:0016070,GO:0019538,GO:0019752,GO:0032991,GO:0034641,GO:0034645,GO:0034660,GO:0043038,GO:0043039,GO:0043043,GO:0043170,GO:0043436,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044281,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0071704,GO:0090304,GO:1901360,GO:1901564,GO:1901566,GO:1901576,GO:1902494
6.1.1.20
0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009701
403.0
View
DYD2_k127_6553749_10
self proteolysis
-
-
-
0.000000000000000000000000000000000000144
163.0
View
DYD2_k127_6553749_11
PFAM Transketolase, thiamine diphosphate binding domain
K00615
-
2.2.1.1
0.000000000000000000000000000001307
123.0
View
DYD2_k127_6553749_12
ribose 5-phosphate isomerase
K01808
-
5.3.1.6
0.0000000000000000000000000001268
120.0
View
DYD2_k127_6553749_13
Mazg nucleotide pyrophosphohydrolase
-
-
-
0.0000000000000000000001575
101.0
View
DYD2_k127_6553749_14
Belongs to the ribulose-phosphate 3-epimerase family
K01783
GO:0003674,GO:0003824,GO:0004750,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005975,GO:0005996,GO:0006081,GO:0006098,GO:0006139,GO:0006725,GO:0006732,GO:0006733,GO:0006739,GO:0006753,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0009052,GO:0009056,GO:0009117,GO:0009987,GO:0016052,GO:0016853,GO:0016854,GO:0016857,GO:0019321,GO:0019323,GO:0019362,GO:0019637,GO:0019682,GO:0019693,GO:0034641,GO:0043167,GO:0043169,GO:0044237,GO:0044238,GO:0044262,GO:0044281,GO:0044282,GO:0044424,GO:0044444,GO:0044464,GO:0046365,GO:0046483,GO:0046496,GO:0046872,GO:0051156,GO:0051186,GO:0055086,GO:0071704,GO:0072524,GO:1901135,GO:1901360,GO:1901564,GO:1901575
5.1.3.1
0.0000000000000000000002538
104.0
View
DYD2_k127_6553749_15
peptidyl-prolyl cis-trans isomerase activity
-
-
-
0.00000000000000000000905
99.0
View
DYD2_k127_6553749_16
PFAM Glycerophosphoryl diester phosphodiesterase
K01126
-
3.1.4.46
0.000000000000000001461
94.0
View
DYD2_k127_6553749_17
belongs to the Fur family
K03711
-
-
0.0000000000004863
74.0
View
DYD2_k127_6553749_18
Pfam:Pyridox_oxidase
-
-
-
0.0000000004638
67.0
View
DYD2_k127_6553749_19
GDP-mannose mannosyl hydrolase activity
K03574
-
3.6.1.55
0.0000000005575
66.0
View
DYD2_k127_6553749_2
Trehalase
-
-
-
0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006637
376.0
View
DYD2_k127_6553749_20
Glutaredoxin
-
-
-
0.00000001457
59.0
View
DYD2_k127_6553749_21
exo-alpha-(2->6)-sialidase activity
-
-
-
0.000004389
60.0
View
DYD2_k127_6553749_22
cellulose 1,4-beta-cellobiosidase activity
-
-
-
0.00001005
59.0
View
DYD2_k127_6553749_3
Thioredoxin reductase
K00384
-
1.8.1.9
0.000000000000000000000000000000000000000000000000000000000000000000000000000000000009556
293.0
View
DYD2_k127_6553749_4
Belongs to the class-II aminoacyl-tRNA synthetase family. Phe-tRNA synthetase alpha subunit type 1 subfamily
K01889
GO:0003674,GO:0003824,GO:0004812,GO:0004826,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006082,GO:0006139,GO:0006399,GO:0006412,GO:0006418,GO:0006432,GO:0006518,GO:0006520,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0016070,GO:0016874,GO:0016875,GO:0019538,GO:0019752,GO:0034641,GO:0034645,GO:0034660,GO:0043038,GO:0043039,GO:0043043,GO:0043170,GO:0043436,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044281,GO:0044424,GO:0044464,GO:0046483,GO:0071704,GO:0090304,GO:0140098,GO:0140101,GO:1901360,GO:1901564,GO:1901566,GO:1901576
6.1.1.20
0.000000000000000000000000000000000000000000000000000000000000000000000000000204
268.0
View
DYD2_k127_6553749_5
Catalyzes the hydrolysis of inorganic pyrophosphate (PPi) forming two phosphate ions
K01507
GO:0000287,GO:0003674,GO:0003824,GO:0004427,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006793,GO:0008150,GO:0008152,GO:0008270,GO:0009987,GO:0016462,GO:0016787,GO:0016817,GO:0016818,GO:0043167,GO:0043169,GO:0044237,GO:0044424,GO:0044444,GO:0044464,GO:0046872,GO:0046914,GO:0050355
3.6.1.1
0.000000000000000000000000000000000000000000000000000000001001
205.0
View
DYD2_k127_6553749_6
PFAM RmuC family
K09760
-
-
0.000000000000000000000000000000000000000000000000001441
196.0
View
DYD2_k127_6553749_7
ZIP Zinc transporter
K16267
-
-
0.000000000000000000000000000000000000000001036
166.0
View
DYD2_k127_6553749_8
Belongs to the UPF0234 family
K09767
GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005886,GO:0016020,GO:0044424,GO:0044444,GO:0044464,GO:0071944
-
0.00000000000000000000000000000000000003611
149.0
View
DYD2_k127_6553749_9
cellulose 1,4-beta-cellobiosidase activity
-
-
-
0.00000000000000000000000000000000000004704
165.0
View
DYD2_k127_6668922_0
Allows the formation of correctly charged Gln-tRNA(Gln) through the transamidation of misacylated Glu-tRNA(Gln) in organisms which lack glutaminyl-tRNA synthetase. The reaction takes place in the presence of glutamine and ATP through an activated gamma-phospho-Glu-tRNA(Gln)
K02433
-
6.3.5.6,6.3.5.7
0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005588
447.0
View
DYD2_k127_6668922_1
Allows the formation of correctly charged Asn-tRNA(Asn) or Gln-tRNA(Gln) through the transamidation of misacylated Asp- tRNA(Asn) or Glu-tRNA(Gln) in organisms which lack either or both of asparaginyl-tRNA or glutaminyl-tRNA synthetases. The reaction takes place in the presence of glutamine and ATP through an activated phospho-Asp-tRNA(Asn) or phospho-Glu-tRNA(Gln)
K02434
GO:0003674,GO:0003824,GO:0006082,GO:0006139,GO:0006399,GO:0006520,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0009987,GO:0016070,GO:0016874,GO:0016879,GO:0016884,GO:0019752,GO:0034641,GO:0034660,GO:0043038,GO:0043039,GO:0043170,GO:0043436,GO:0044237,GO:0044238,GO:0044281,GO:0046483,GO:0050567,GO:0070681,GO:0071704,GO:0090304,GO:0140098,GO:0140101,GO:1901360,GO:1901564
6.3.5.6,6.3.5.7
0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009423
379.0
View
DYD2_k127_6668922_2
PFAM Nucleotidyl transferase
K00963
-
2.7.7.9
0.00000000000000000000000000000001123
128.0
View
DYD2_k127_6668922_3
Allows the formation of correctly charged Asn-tRNA(Asn) or Gln-tRNA(Gln) through the transamidation of misacylated Asp- tRNA(Asn) or Glu-tRNA(Gln) in organisms which lack either or both of asparaginyl-tRNA or glutaminyl-tRNA synthetases. The reaction takes place in the presence of glutamine and ATP through an activated phospho-Asp-tRNA(Asn) or phospho-Glu-tRNA(Gln)
K02435
-
6.3.5.6,6.3.5.7
0.0000000001129
65.0
View
DYD2_k127_667520_0
Major facilitator Superfamily
-
-
-
0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001204
472.0
View
DYD2_k127_667520_1
Protein of unknown function (DUF1524)
-
-
-
0.0000000000000000000000000000000000000000000000000000000000000000000008801
244.0
View
DYD2_k127_667520_2
Belongs to the ATCase OTCase family
K00609
-
2.1.3.2
0.00000000000000000000000005064
111.0
View
DYD2_k127_667520_3
Domain of unknown function (DUF4131)
K02238
-
-
0.0000000000000000000001423
112.0
View
DYD2_k127_667520_4
Lamin Tail Domain
-
-
-
0.0001087
55.0
View
DYD2_k127_667520_5
Lamin Tail Domain
-
-
-
0.000577
52.0
View
DYD2_k127_79448_0
Catalyzes the ATP-dependent amidation of deamido-NAD to form NAD. Uses ammonia as a nitrogen source
K01916,K01950
-
6.3.1.5,6.3.5.1
0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008105
581.0
View
DYD2_k127_79448_1
Is required not only for elongation of protein synthesis but also for the initiation of all mRNA translation through initiator tRNA(fMet) aminoacylation
K01874
-
6.1.1.10
0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003537
431.0
View
DYD2_k127_79448_10
Regulatory subunit of the condensin complex, a complex required for conversion of interphase chromatin into mitotic-like condense chromosomes. The condensin complex probably introduces positive supercoils into relaxed DNA in the presence of type I topoisomerases and converts nicked DNA into positive knotted forms in the presence of type II topoisomerases
K06677
GO:0000003,GO:0000018,GO:0000070,GO:0000228,GO:0000278,GO:0000280,GO:0000775,GO:0000779,GO:0000785,GO:0000793,GO:0000794,GO:0000796,GO:0000797,GO:0000799,GO:0000803,GO:0000805,GO:0000819,GO:0003674,GO:0003682,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005634,GO:0005654,GO:0005694,GO:0005737,GO:0005829,GO:0006323,GO:0006996,GO:0007049,GO:0007059,GO:0007076,GO:0007135,GO:0008150,GO:0009892,GO:0009987,GO:0010032,GO:0010520,GO:0010564,GO:0010605,GO:0010639,GO:0010948,GO:0016043,GO:0019219,GO:0019222,GO:0022402,GO:0022414,GO:0030261,GO:0031323,GO:0031324,GO:0031974,GO:0031981,GO:0032991,GO:0033043,GO:0040020,GO:0042393,GO:0043073,GO:0043226,GO:0043227,GO:0043228,GO:0043229,GO:0043231,GO:0043232,GO:0043233,GO:0044422,GO:0044424,GO:0044427,GO:0044428,GO:0044444,GO:0044446,GO:0044454,GO:0044464,GO:0044815,GO:0045120,GO:0045128,GO:0045132,GO:0045144,GO:0045786,GO:0045835,GO:0045910,GO:0045934,GO:0046536,GO:0048285,GO:0048519,GO:0048523,GO:0050789,GO:0050794,GO:0051052,GO:0051053,GO:0051128,GO:0051129,GO:0051171,GO:0051172,GO:0051276,GO:0051304,GO:0051321,GO:0051445,GO:0051447,GO:0051726,GO:0051783,GO:0051784,GO:0060255,GO:0060631,GO:0061983,GO:0065007,GO:0070013,GO:0070192,GO:0071103,GO:0071840,GO:0080090,GO:0098687,GO:0098813,GO:0110029,GO:0140013,GO:0140014,GO:1903046,GO:1903047,GO:2000241,GO:2000242
-
0.00000000000000000001325
102.0
View
DYD2_k127_79448_11
Phosphotransferase enzyme family
-
-
-
0.0000978
54.0
View
DYD2_k127_79448_12
Methyltransferase required for the conversion of demethylmenaquinol (DMKH2) to menaquinol (MKH2)
K03183
GO:0003674,GO:0003824,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005886,GO:0008150,GO:0008152,GO:0008168,GO:0008757,GO:0016020,GO:0016740,GO:0016741,GO:0032259,GO:0040007,GO:0044424,GO:0044464,GO:0071944
2.1.1.163,2.1.1.201
0.0005024
51.0
View
DYD2_k127_79448_2
Catalyzes the 2-thiolation of uridine at the wobble position (U34) of tRNA, leading to the formation of s(2)U34
K00566
-
2.8.1.13
0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008871
357.0
View
DYD2_k127_79448_3
aminotransferase class V
K04487
-
2.8.1.7
0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000276
295.0
View
DYD2_k127_79448_4
Catalyzes the attachment of alanine to tRNA(Ala) in a two-step reaction alanine is first activated by ATP to form Ala- AMP and then transferred to the acceptor end of tRNA(Ala). Also edits incorrectly charged Ser-tRNA(Ala) and Gly-tRNA(Ala) via its editing domain
K01872
-
6.1.1.7
0.000000000000000000000000000000000000000000000000000000000000000000000000000000009251
277.0
View
DYD2_k127_79448_5
COG1051 ADP-ribose pyrophosphatase
K03574
-
3.6.1.55
0.00000000000000000000000000000000000000000000000000000000000000000008315
237.0
View
DYD2_k127_79448_6
TIGRFAM hydrolase, TatD family
K03424
-
-
0.0000000000000000000000000000000000000000000000000000003336
203.0
View
DYD2_k127_79448_7
Isochorismatase family
K08281
-
3.5.1.19
0.00000000000000000000000000000000002056
143.0
View
DYD2_k127_79448_8
Catalyzes the synthesis of beta-nicotinate D- ribonucleotide from nicotinate and 5-phospho-D-ribose 1-phosphate at the expense of ATP
-
-
-
0.0000000000000000000000000000008546
138.0
View
DYD2_k127_79448_9
Catalyzes the reversible adenylation of nicotinate mononucleotide (NaMN) to nicotinic acid adenine dinucleotide (NaAD)
K00969
GO:0000309,GO:0003674,GO:0003824,GO:0004515,GO:0006082,GO:0006139,GO:0006520,GO:0006531,GO:0006725,GO:0006732,GO:0006733,GO:0006753,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009066,GO:0009108,GO:0009117,GO:0009165,GO:0009435,GO:0009987,GO:0016740,GO:0016772,GO:0016779,GO:0018130,GO:0019355,GO:0019359,GO:0019362,GO:0019363,GO:0019438,GO:0019637,GO:0019674,GO:0019752,GO:0034627,GO:0034628,GO:0034641,GO:0034654,GO:0043436,GO:0043648,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0046483,GO:0046496,GO:0051186,GO:0051188,GO:0055086,GO:0070566,GO:0071704,GO:0072524,GO:0072525,GO:0090407,GO:1901293,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576,GO:1901605
2.7.7.18
0.00000000000000000000001242
108.0
View
DYD2_k127_863723_0
Histidine kinase
-
-
-
0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001133
372.0
View
DYD2_k127_889083_0
One of the essential components for the initiation of protein synthesis. Protects formylmethionyl-tRNA from spontaneous hydrolysis and promotes its binding to the 30S ribosomal subunits. Also involved in the hydrolysis of GTP during the formation of the 70S ribosomal complex
K02519
-
-
0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003003
509.0
View
DYD2_k127_889083_1
Involved in the restart of stalled replication forks. Recognizes and binds the arrested nascent DNA chain at stalled replication forks. It can open the DNA duplex, via its helicase activity, and promote assembly of the primosome and loading of the major replicative helicase DnaB onto DNA
K04066
GO:0003674,GO:0003678,GO:0003824,GO:0004003,GO:0004386,GO:0006139,GO:0006259,GO:0006260,GO:0006261,GO:0006268,GO:0006270,GO:0006281,GO:0006302,GO:0006310,GO:0006725,GO:0006807,GO:0006950,GO:0006974,GO:0006996,GO:0008026,GO:0008094,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0016043,GO:0016462,GO:0016787,GO:0016817,GO:0016818,GO:0016887,GO:0017111,GO:0032392,GO:0032508,GO:0033554,GO:0034641,GO:0034645,GO:0042623,GO:0043138,GO:0043140,GO:0043170,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0046483,GO:0050896,GO:0051276,GO:0051716,GO:0070035,GO:0071103,GO:0071704,GO:0071840,GO:0090304,GO:0140097,GO:1901360,GO:1901576
-
0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002744
365.0
View
DYD2_k127_889083_10
Catalyzes the reversible transfer of the terminal phosphate group between ATP and AMP. Plays an important role in cellular energy homeostasis and in adenine nucleotide metabolism
K00939
GO:0000166,GO:0003674,GO:0003824,GO:0004017,GO:0004550,GO:0005488,GO:0005524,GO:0005575,GO:0005618,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005886,GO:0006139,GO:0006144,GO:0006163,GO:0006164,GO:0006165,GO:0006167,GO:0006725,GO:0006753,GO:0006793,GO:0006796,GO:0006807,GO:0008144,GO:0008150,GO:0008152,GO:0009058,GO:0009112,GO:0009117,GO:0009123,GO:0009124,GO:0009126,GO:0009127,GO:0009132,GO:0009141,GO:0009150,GO:0009152,GO:0009156,GO:0009161,GO:0009165,GO:0009167,GO:0009168,GO:0009259,GO:0009260,GO:0009987,GO:0016020,GO:0016301,GO:0016310,GO:0016740,GO:0016772,GO:0016776,GO:0017076,GO:0017144,GO:0018130,GO:0019205,GO:0019438,GO:0019637,GO:0019693,GO:0030312,GO:0030554,GO:0032261,GO:0032553,GO:0032555,GO:0032559,GO:0034641,GO:0034654,GO:0035639,GO:0036094,GO:0043094,GO:0043101,GO:0043167,GO:0043168,GO:0043173,GO:0044209,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0044424,GO:0044444,GO:0044464,GO:0046033,GO:0046390,GO:0046483,GO:0046939,GO:0046940,GO:0050145,GO:0055086,GO:0071704,GO:0071944,GO:0072521,GO:0072522,GO:0090407,GO:0097159,GO:0097367,GO:1901135,GO:1901137,GO:1901265,GO:1901293,GO:1901360,GO:1901362,GO:1901363,GO:1901564,GO:1901566,GO:1901576
2.7.4.3
0.0000000000000000008888
93.0
View
DYD2_k127_889083_11
PFAM Yqey-like protein
K09117
-
-
0.00000000000000002081
87.0
View
DYD2_k127_889083_12
Collagen triple helix repeat (20 copies)
-
-
-
0.00000000000007385
87.0
View
DYD2_k127_889083_13
-
-
-
-
0.000000000002803
71.0
View
DYD2_k127_889083_15
PFAM DNA polymerase, beta domain protein region
-
-
-
0.000001389
53.0
View
DYD2_k127_889083_16
bacterial-type RNA polymerase transcription factor activity, metal ion regulated sequence-specific DNA binding
-
-
-
0.000001439
63.0
View
DYD2_k127_889083_17
Belongs to the bacterial ribosomal protein bS21 family
K02970
GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005840,GO:0032991,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044446,GO:0044464,GO:1990904
-
0.00003999
49.0
View
DYD2_k127_889083_2
Cell division protein that is involved in the assembly of the Z ring. May serve as a membrane anchor for the Z ring
K03590
-
-
0.0000000000000000000000000000000000000000000000000000000000000000000000000000000002746
288.0
View
DYD2_k127_889083_3
Metallopeptidase family M24
K01265
-
3.4.11.18
0.000000000000000000000000000000000000000000000000000000000000000000000004762
250.0
View
DYD2_k127_889083_4
Ribosomal protein S1
K02945
-
-
0.000000000000000000000000000000000000000000000000000000000000000006959
238.0
View
DYD2_k127_889083_5
Essential cell division protein that forms a contractile ring structure (Z ring) at the future cell division site. The regulation of the ring assembly controls the timing and the location of cell division. One of the functions of the FtsZ ring is to recruit other cell division proteins to the septum to produce a new cell wall between the dividing cells. Binds GTP and shows GTPase activity
K03531
-
-
0.0000000000000000000000000000000000000000000000000000006098
196.0
View
DYD2_k127_889083_6
Attaches a formyl group to the free amino group of methionyl-tRNA(fMet). The formyl group appears to play a dual role in the initiator identity of N-formylmethionyl-tRNA by promoting its recognition by IF2 and preventing the misappropriation of this tRNA by the elongation apparatus
K00604
GO:0003674,GO:0003824,GO:0004479,GO:0006139,GO:0006396,GO:0006399,GO:0006400,GO:0006412,GO:0006413,GO:0006464,GO:0006518,GO:0006725,GO:0006807,GO:0008033,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009451,GO:0009987,GO:0010467,GO:0016070,GO:0016740,GO:0016741,GO:0016742,GO:0019538,GO:0019988,GO:0034470,GO:0034641,GO:0034645,GO:0034660,GO:0036211,GO:0043043,GO:0043170,GO:0043412,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0046483,GO:0071704,GO:0071951,GO:0090304,GO:0140098,GO:0140101,GO:1901360,GO:1901564,GO:1901566,GO:1901576
2.1.2.9
0.0000000000000000000000000000000000000001452
162.0
View
DYD2_k127_889083_7
Transcriptional regulator sugar kinase
K00845
-
2.7.1.2
0.0000000000000000000000000003532
124.0
View
DYD2_k127_889083_8
Removes the formyl group from the N-terminal Met of newly synthesized proteins. Requires at least a dipeptide for an efficient rate of reaction. N-terminal L-methionine is a prerequisite for activity but the enzyme has broad specificity at other positions
K01462
-
3.5.1.88
0.0000000000000000000000006979
111.0
View
DYD2_k127_980884_0
transferase activity, transferring glycosyl groups
-
-
-
0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009951
406.0
View
DYD2_k127_980884_1
Major role in the synthesis of nucleoside triphosphates other than ATP. The ATP gamma phosphate is transferred to the NDP beta phosphate via a ping-pong mechanism, using a phosphorylated active-site intermediate
K00940
GO:0003674,GO:0003824,GO:0004518,GO:0004550,GO:0005575,GO:0005576,GO:0005622,GO:0005623,GO:0005886,GO:0006139,GO:0006163,GO:0006165,GO:0006220,GO:0006464,GO:0006468,GO:0006725,GO:0006753,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0009117,GO:0009132,GO:0009987,GO:0016020,GO:0016301,GO:0016310,GO:0016740,GO:0016772,GO:0016776,GO:0016787,GO:0016788,GO:0018995,GO:0019205,GO:0019538,GO:0019637,GO:0033643,GO:0033646,GO:0033647,GO:0033648,GO:0034641,GO:0036211,GO:0042025,GO:0043170,GO:0043412,GO:0043656,GO:0043657,GO:0044215,GO:0044216,GO:0044217,GO:0044237,GO:0044238,GO:0044260,GO:0044267,GO:0044281,GO:0044464,GO:0046483,GO:0046777,GO:0046939,GO:0055086,GO:0071704,GO:0071944,GO:0072521,GO:0072527,GO:0090304,GO:0090305,GO:1901360,GO:1901564
2.7.4.6
0.00000000000000000000000000000000000000000008055
166.0
View
DYD2_k127_980884_2
Catalyzes the transfer of a phosphate group to glutamate to form L-glutamate 5-phosphate
K00931
-
2.7.2.11
0.00000000000000000000000000000002167
137.0
View
DYD2_k127_980884_3
Plays a major role in protein secretion by helping the post-translocational extracellular folding of several secreted proteins
K07533
-
5.2.1.8
0.0000000002531
72.0
View
DYD2_k127_980884_4
Negatively regulates transcription of bacterial ribonucleotide reductase nrd genes and operons by binding to NrdR- boxes
K07738
-
-
0.00000005583
59.0
View
DYD2_k127_980884_5
PFAM Excinuclease ABC C subunit domain protein
K07461
-
-
0.000003068
51.0
View
DYD2_k127_980884_6
manually curated
-
-
-
0.000003373
51.0
View
DYD2_k127_980884_7
Bacterial PH domain
K08981
-
-
0.000004121
55.0
View
DYD2_k127_980884_8
-
-
-
-
0.0002298
44.0
View
DYD2_k127_980884_9
GIY-YIG catalytic domain
K07461
-
-
0.0003061
43.0
View
