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Overview

ID MAG00921
Name DYD2_bin.45
Sample SMP0026
Taxonomy
Kingdom Bacteria
Phylum Bacteroidota
Class Bacteroidia
Order Cytophagales
Family Cyclobacteriaceae
Genus Shiella
Species
Assembly information
Completeness (%) 63.71
Contamination (%) 1.55
GC content (%) 39.0
N50 (bp) 2,063
Genome size (bp) 1,875,585

Location

Module

Module ID Module name Total genes Total steps Contain genes Contain steps Percentage of genes Percentage of steps

Genes2149

Gene name Description KEGG GOs EC E-value Score Sequence
DYD2_k127_1002497_0 SAM-dependent methyltransferase K06969 - 2.1.1.191 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001627 505.0
DYD2_k127_1002497_1 COGs COG0659 Sulfate permease and related transporter (MFS superfamily) - - - 0.0000000000000000000000000000000000000000000000000000000000000000001624 238.0
DYD2_k127_1002497_2 COGs COG0659 Sulfate permease and related transporter (MFS superfamily) K03321 - - 0.00000000000000000000000000000000000000000000000000000000000000002135 228.0
DYD2_k127_1006644_0 Orotidine 5''-phosphate decarboxylase K01591 GO:0003674,GO:0003824,GO:0004590,GO:0006139,GO:0006206,GO:0006207,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009112,GO:0009987,GO:0016829,GO:0016830,GO:0016831,GO:0018130,GO:0019856,GO:0034641,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0046112,GO:0046483,GO:0055086,GO:0071704,GO:0072527,GO:0072528,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576 4.1.1.23 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004341 399.0
DYD2_k127_1006644_1 Protein of unknown function (DUF962) - - - 0.000000000000000000000000000000000009481 137.0
DYD2_k127_1006644_2 Protein of unknown function (DUF2851) - - - 0.000000000000000001377 86.0
DYD2_k127_1011879_0 May play a role in DNA repair. It seems to be involved in an RecBC-independent recombinational process of DNA repair. It may act with RecF and RecO K06187 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002498 301.0
DYD2_k127_1011879_1 Haem-binding uptake, Tiki superfamily, ChaN - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000272 261.0
DYD2_k127_101474_0 Two-component system response regulatory protein, LytTR family K02477 - - 0.000000000000000000000000000000000000000000000001339 178.0
DYD2_k127_101474_1 LVIVD repeat - - - 0.0000000000000000000000000001726 117.0
DYD2_k127_101474_2 long-chain fatty acid transport protein - - - 0.0002304 51.0
DYD2_k127_1020221_0 Tetratricopeptide repeat - - - 1.127e-219 705.0
DYD2_k127_1020401_0 Formation of pseudouridine at positions 38, 39 and 40 in the anticodon stem and loop of transfer RNAs K06173 GO:0001522,GO:0003674,GO:0003824,GO:0006139,GO:0006396,GO:0006399,GO:0006400,GO:0006725,GO:0006807,GO:0008033,GO:0008150,GO:0008152,GO:0009451,GO:0009982,GO:0009987,GO:0010467,GO:0016070,GO:0016853,GO:0016866,GO:0031119,GO:0034470,GO:0034641,GO:0034660,GO:0043170,GO:0043412,GO:0044237,GO:0044238,GO:0046483,GO:0071704,GO:0090304,GO:1901360 5.4.99.12 0.0000000000000000000000000000000000000000000000000000000000000000000000005745 251.0
DYD2_k127_1020401_1 ABC transporter transmembrane region K18890 - - 0.000000000000000000000000000000000000000000000000000000000005671 210.0
DYD2_k127_1021273_0 Flavin containing amine oxidoreductase - - - 1.16e-219 694.0
DYD2_k127_1021273_1 Belongs to the thiolase family K00626,K07823 - 2.3.1.174,2.3.1.9 0.00000000000000000000000000000000000000000000000003684 180.0
DYD2_k127_1021273_2 - - - - 0.000000000000000000000000000000004007 130.0
DYD2_k127_1021273_3 Domain of unknown function (DUF4293) - - - 0.000000000000000000000005104 108.0
DYD2_k127_1021273_4 Belongs to the thiolase family K00626,K07823 - 2.3.1.174,2.3.1.9 0.00000000005002 63.0
DYD2_k127_1031088_0 Catalyzes the conversion of dethiobiotin (DTB) to biotin by the insertion of a sulfur atom into dethiobiotin via a radical- based mechanism K01012 - 2.8.1.6 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006735 490.0
DYD2_k127_1031088_1 signal peptide peptidase SppA, 36K type K04773 - - 0.0000000007658 61.0
DYD2_k127_1032604_0 An accessory protein needed during the final step in the assembly of 30S ribosomal subunit, possibly for assembly of the head region. Probably interacts with S19. Essential for efficient processing of 16S rRNA. May be needed both before and after RbfA during the maturation of 16S rRNA. It has affinity for free ribosomal 30S subunits but not for 70S ribosomes K02860 - - 0.000000000000000000000000000000000000000000000000000000002069 204.0
DYD2_k127_1032604_1 Belongs to the RNA methyltransferase TrmD family K00554 GO:0001510,GO:0003674,GO:0003824,GO:0006139,GO:0006396,GO:0006399,GO:0006400,GO:0006725,GO:0006807,GO:0008033,GO:0008150,GO:0008152,GO:0008168,GO:0008173,GO:0008175,GO:0008757,GO:0009019,GO:0009451,GO:0009987,GO:0010467,GO:0016070,GO:0016423,GO:0016740,GO:0016741,GO:0016772,GO:0016779,GO:0030488,GO:0032259,GO:0034470,GO:0034641,GO:0034660,GO:0043170,GO:0043412,GO:0043414,GO:0044237,GO:0044238,GO:0044260,GO:0046483,GO:0050518,GO:0070567,GO:0071704,GO:0090304,GO:0140098,GO:0140101,GO:1901360 2.1.1.228 0.000000000000000000000000000000000000000000000001363 174.0
DYD2_k127_1032604_2 Belongs to the bacterial ribosomal protein bS16 family K02959 GO:0003674,GO:0003735,GO:0005198,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005840,GO:0006412,GO:0006518,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0015935,GO:0019538,GO:0032991,GO:0034641,GO:0034645,GO:0043043,GO:0043170,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044446,GO:0044464,GO:0071704,GO:1901564,GO:1901566,GO:1901576,GO:1990904 - 0.00000000000000000000000000000000006364 137.0
DYD2_k127_10331_0 PepSY-associated TM region - - - 0.00000000000000000000000000000001293 128.0
DYD2_k127_10331_1 PFAM Preprotein translocase SecG subunit K03075 - - 0.000000000000000000000000000002584 123.0
DYD2_k127_10331_2 - - - - 0.0000000000000000000000005535 117.0
DYD2_k127_1033287_0 Glyoxalase bleomycin resistance protein dioxygenase K05606 - 5.1.99.1 0.00000000000000000000000000000000000000000000000000000000000001216 217.0
DYD2_k127_1033287_1 - - - - 0.00000000000000000000000000000000000000000000000000000000008714 206.0
DYD2_k127_1033287_2 Belongs to the HesB IscA family K13628 - - 0.0000000000000000000000000000000000000000000000000000004136 194.0
DYD2_k127_1056050_0 HlyD membrane-fusion protein of T1SS - - - 0.0000000000000000000000000000000000000006062 153.0
DYD2_k127_1056050_1 PAS fold - - - 0.0000000000000000001232 93.0
DYD2_k127_105903_0 methionine K00548 - 2.1.1.13 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003879 459.0
DYD2_k127_1062946_0 ribonuclease, Rne Rng family K08301 - - 7.31e-249 776.0
DYD2_k127_1062946_1 Tetratricopeptide repeat - - - 0.00000000000000000000000000000000000000000000000000000008506 200.0
DYD2_k127_1062946_2 - - - - 0.0000008948 51.0
DYD2_k127_1065545_0 protein (some members contain a von Willebrand factor type A (vWA) domain) - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008952 366.0
DYD2_k127_1065545_1 - - - - 0.0000000000000000000000000000000000000000000000000000000000003296 222.0
DYD2_k127_1065545_2 PFAM von Willebrand factor type A K07114 - - 0.000000000000000000095 93.0
DYD2_k127_1073908_0 Response regulator of the LytR AlgR family - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000004221 267.0
DYD2_k127_1073908_1 TIGRFAM riboflavin synthase, alpha subunit K00793 - 2.5.1.9 0.000000000000000000000000000000000000000000000000000000000000004145 219.0
DYD2_k127_107553_0 PFAM CobQ CobB MinD ParA nucleotide binding domain K03496 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001414 354.0
DYD2_k127_107553_1 Belongs to the ParB family K03497 - - 0.00000000000000000000001825 102.0
DYD2_k127_107553_2 Belongs to the ParB family K03497 - - 0.000000000000000005887 83.0
DYD2_k127_1075599_0 Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family K00821 - 2.6.1.11,2.6.1.17 0.000000000000000000000000000000000000000000000000000000000000000000000000003493 254.0
DYD2_k127_1075599_1 RNA recognition motif - - - 0.000000000000000000000000000000000000000002609 158.0
DYD2_k127_1075599_2 Response regulator of the LytR AlgR family K02477 - - 0.0000000003988 61.0
DYD2_k127_1076608_0 3-demethylubiquinone-9 3-methyltransferase K04750 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000009538 259.0
DYD2_k127_1076608_1 Protein of unknown function (DUF1624) - - - 0.00000000000000000000000000000000000000000000000000000000000004892 215.0
DYD2_k127_1076608_2 COG2346, Truncated hemoglobins K06886 - - 0.00000000000000000000000000000001484 131.0
DYD2_k127_1076608_3 HEAT domain containing protein - - - 0.00000000000000000169 88.0
DYD2_k127_108597_0 PFAM Metallo-beta-lactamase superfamily - - - 0.000000000000000000000000000000000000000000000000000000000000000000004904 237.0
DYD2_k127_108597_1 Belongs to the CDP-alcohol phosphatidyltransferase class-I family K17103 - 2.7.8.8 0.0000000000000000000000000000000000000000000000000000000000000000003254 236.0
DYD2_k127_108597_2 Peptidase family C25 - - - 0.000000000000000000000000000000000000000000000000000000000000001247 232.0
DYD2_k127_1086163_0 Part of a stress-induced multi-chaperone system, it is involved in the recovery of the cell from heat-induced damage, in cooperation with DnaK, DnaJ and GrpE K03695 - - 9.304e-315 970.0
DYD2_k127_1086417_0 Fatty acid desaturase K00508 - 1.14.19.3 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004145 392.0
DYD2_k127_1086417_1 Belongs to the 'phage' integrase family - - - 0.0000000000001756 72.0
DYD2_k127_1093841_0 permease K02004 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006168 387.0
DYD2_k127_1094152_0 Catalyzes the ATP-dependent 2-thiolation of cytidine in position 32 of tRNA, to form 2-thiocytidine (s(2)C32). The sulfur atoms are provided by the cysteine cysteine desulfurase (IscS) system K14058 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005035 387.0
DYD2_k127_1094152_1 - - - - 0.00000000000000000000000000000000000000001447 156.0
DYD2_k127_1099453_0 TIGRFAM flavoprotein, HI0933 family K07007 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009164 429.0
DYD2_k127_1140361_0 MacB-like periplasmic core domain K02004 - - 7.655e-208 663.0
DYD2_k127_1140361_1 Cation efflux family - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000004871 279.0
DYD2_k127_1140361_2 FtsX-like permease family - - - 0.0000000000000000000000000000000000000000000000000000000000000000000005593 246.0
DYD2_k127_1140361_3 FtsX-like permease family - - - 0.00000000000000000000000000000000799 130.0
DYD2_k127_1140629_0 integral membrane protein - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001845 364.0
DYD2_k127_1140629_1 pfam nudix - - - 0.000000000000000000000000000000000000000000005916 166.0
DYD2_k127_1155855_0 Domain of unknown function (DUF4442) - - - 0.0000000000000000000000000000000000000000000000000000000000000000002184 233.0
DYD2_k127_1155855_1 Glycine D-amino acid oxidase (deaminating) - - - 0.000000000000000000000000000000000004529 138.0
DYD2_k127_1156588_0 Transport and Golgi organisation 2 - - - 0.000000000000000000000000000000000000000000000000000000000000004281 222.0
DYD2_k127_1156588_1 PFAM Glycosyl transferases group 1 K00754 - - 0.0000000000000000000000000000000000000000001979 161.0
DYD2_k127_1159562_0 TIGRFAM exonuclease, DNA polymerase III, epsilon subunit family K02342 - 2.7.7.7 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004642 428.0
DYD2_k127_1164678_0 Excinuclease ABC subunit B - - - 0.0000000000000000000000000000000000000000000000000000000000002291 220.0
DYD2_k127_1164678_1 AAA domain, putative AbiEii toxin, Type IV TA system K01990 - - 0.000000005044 61.0
DYD2_k127_1169457_0 Pentapeptide repeats (9 copies) - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007441 399.0
DYD2_k127_1169457_1 D-isomer specific 2-hydroxyacid dehydrogenase K00058 - 1.1.1.399,1.1.1.95 0.0000000000000000000000000000000000327 136.0
DYD2_k127_1170099_0 Involved in the biosynthesis of branched-chain amino acids (BCAA). Catalyzes an alkyl-migration followed by a ketol- acid reduction of (S)-2-acetolactate (S2AL) to yield (R)-2,3- dihydroxy-isovalerate. In the isomerase reaction, S2AL is rearranged via a Mg-dependent methyl migration to produce 3- hydroxy-3-methyl-2-ketobutyrate (HMKB). In the reductase reaction, this 2-ketoacid undergoes a metal-dependent reduction by NADPH to yield (R)-2,3-dihydroxy-isovalerate K00053 - 1.1.1.86 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007655 525.0
DYD2_k127_1170099_2 acetolactate synthase K01652 - 2.2.1.6 0.00000001937 55.0
DYD2_k127_1174597_0 PFAM FAD dependent oxidoreductase K15736 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001149 442.0
DYD2_k127_1174786_0 TIGRFAM delta-1-pyrroline-5-carboxylate dehydrogenase, group 1 K00294,K13821 - 1.2.1.88,1.5.5.2 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001755 422.0
DYD2_k127_1174786_1 haloacid dehalogenase superfamily, subfamily IA, variant 1 with third motif having Dx(3-4)D or Dx(3-4)E K07025 - - 0.000000000000007712 75.0
DYD2_k127_1183015_0 Putative FMN-binding domain K07734 - - 0.000000000000000000000000000000000000000000000000000001797 194.0
DYD2_k127_1183015_1 PFAM Heavy-metal-associated domain - - - 0.000000000000000000575 89.0
DYD2_k127_1183015_2 Sh3 type 3 domain protein K02450,K12132 - 2.7.11.1 0.000000000000000009693 87.0
DYD2_k127_1185437_0 Catalyzes the first step in hexosamine metabolism, converting fructose-6P into glucosamine-6P using glutamine as a nitrogen source K00820 GO:0003674,GO:0003824,GO:0004360,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006002,GO:0006040,GO:0006047,GO:0006139,GO:0006464,GO:0006486,GO:0006487,GO:0006725,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0008483,GO:0009058,GO:0009059,GO:0009100,GO:0009101,GO:0009225,GO:0009987,GO:0016740,GO:0016769,GO:0019538,GO:0019637,GO:0034641,GO:0034645,GO:0036211,GO:0043170,GO:0043412,GO:0043413,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044281,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0055086,GO:0070085,GO:0070548,GO:0071704,GO:1901135,GO:1901137,GO:1901360,GO:1901564,GO:1901566,GO:1901576 2.6.1.16 3.148e-283 875.0
DYD2_k127_1186892_0 Catalyzes the condensation reaction of fatty acid synthesis by the addition to an acyl acceptor of two carbons from malonyl-ACP. Catalyzes the first condensation reaction which initiates fatty acid synthesis and may therefore play a role in governing the total rate of fatty acid production. Possesses both acetoacetyl-ACP synthase and acetyl transacylase activities. Its substrate specificity determines the biosynthesis of branched- chain and or straight-chain of fatty acids K00648 GO:0003674,GO:0003824,GO:0006082,GO:0006629,GO:0006631,GO:0008150,GO:0008152,GO:0009987,GO:0016740,GO:0016746,GO:0016747,GO:0019752,GO:0032787,GO:0033818,GO:0043436,GO:0044237,GO:0044238,GO:0044255,GO:0044281,GO:0071704 2.3.1.180 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004734 561.0
DYD2_k127_1186892_1 Belongs to the bacterial ribosomal protein bL32 family K02911 - - 0.0000000000000000000000000000001307 123.0
DYD2_k127_1187431_0 MacB-like periplasmic core domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009776 395.0
DYD2_k127_1187431_1 FtsX-like permease family K02004 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000003273 256.0
DYD2_k127_1192950_0 Leukotriene A4 hydrolase, C-terminal - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005022 497.0
DYD2_k127_1197490_0 Acetyl-CoA carboxylase carboxyltransferase component (subunits alpha and beta) K01966 - 2.1.3.15,6.4.1.3 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001266 432.0
DYD2_k127_1197490_1 Ppx GppA phosphatase K01524 - 3.6.1.11,3.6.1.40 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000118 371.0
DYD2_k127_1197490_2 Uncharacterized protein conserved in bacteria (DUF2062) - - - 0.0000000000000002848 85.0
DYD2_k127_1197568_0 Acyl-CoA synthetase (AMP-forming) AMP-acid ligase II K01897 - 6.2.1.3 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006952 507.0
DYD2_k127_120597_0 Belongs to the class-II aminoacyl-tRNA synthetase family K04567 - 6.1.1.6 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004869 555.0
DYD2_k127_120799_0 Belongs to the short-chain dehydrogenases reductases (SDR) family - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000339 288.0
DYD2_k127_120799_1 PFAM Activator of Hsp90 ATPase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000004421 239.0
DYD2_k127_120799_2 ArsR family transcriptional regulator - - - 0.0000000000000000000000000000000000000000000000000000001032 196.0
DYD2_k127_1209076_0 protein kinase activity - - - 0.00000000000000000000000000000007087 139.0
DYD2_k127_1213498_0 Acts as a magnesium transporter K06213 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003784 382.0
DYD2_k127_1213498_1 D-isomer specific 2-hydroxyacid dehydrogenase K00058 - 1.1.1.399,1.1.1.95 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001654 309.0
DYD2_k127_1217330_0 PFAM Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase - - - 0.000000000000000000000000000000000000000000000006103 186.0
DYD2_k127_1217330_1 Necessary for efficient RNA polymerase transcription elongation past template-encoded arresting sites. The arresting sites in DNA have the property of trapping a certain fraction of elongating RNA polymerases that pass through, resulting in locked ternary complexes. Cleavage of the nascent transcript by cleavage factors such as GreA or GreB allows the resumption of elongation from the new 3'terminus. GreA releases sequences of 2 to 3 nucleotides K03624 - - 0.00000004781 54.0
DYD2_k127_1243682_0 Belongs to the sigma-70 factor family. ECF subfamily K03088 - - 0.0000000000000000000000000000000002651 139.0
DYD2_k127_1243682_1 Nitroreductase family - - - 0.0000000000000000000000000013 111.0
DYD2_k127_1243682_2 - - - - 0.000000000000148 73.0
DYD2_k127_1244157_0 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain K00058 - 1.1.1.399,1.1.1.95 2.293e-203 641.0
DYD2_k127_1244157_1 TspO/MBR family K05770 - - 0.000000000000000000000000000000000000000000000004187 177.0
DYD2_k127_1245174_0 Belongs to the alpha-IPM synthase homocitrate synthase family K01649 - 2.3.3.13 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001252 598.0
DYD2_k127_1245174_1 radical SAM domain protein - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001799 350.0
DYD2_k127_1245174_2 Catalyzes the isomerization between 2-isopropylmalate and 3-isopropylmalate, via the formation of 2-isopropylmaleate K01703 - 4.2.1.33,4.2.1.35 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003243 323.0
DYD2_k127_1249217_0 ATPase that binds to both the 70S ribosome and the 50S ribosomal subunit in a nucleotide-independent manner K06942 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002293 512.0
DYD2_k127_1249217_1 protein (some members contain a von Willebrand factor type A (vWA) domain) - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001378 346.0
DYD2_k127_1249217_2 Protein of unknown function (DUF3276) - - - 0.00000000000000000000000000000000000000000000007255 170.0
DYD2_k127_1250328_0 WD40-like Beta Propeller Repeat - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002206 532.0
DYD2_k127_1266000_0 Belongs to the dicarboxylate amino acid cation symporter (DAACS) (TC 2.A.23) family K11102,K11103 - - 0.000000000000000000000000000000000000000000000000000000000000000000000004408 244.0
DYD2_k127_1266000_1 Putative auto-transporter adhesin, head GIN domain - - - 0.0000000000000000000006467 105.0
DYD2_k127_1266288_0 Permease YjgP YjgQ family K11720 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004405 493.0
DYD2_k127_1266288_1 PFAM EamA-like transporter family - - - 0.0000000000000000000000000000000000000000000000000000000000000000246 226.0
DYD2_k127_1267230_0 TIGRFAM chromate transporter, chromate ion transporter (CHR) family K07240 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000001528 272.0
DYD2_k127_1267230_1 acetyltransferases and hydrolases with the alpha beta hydrolase fold - - - 0.00000000000000425 80.0
DYD2_k127_1271162_0 RNA helicase K11927 - 3.6.4.13 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000706 413.0
DYD2_k127_1271162_1 CAAX protease self-immunity - - - 0.00000000000000000000000000001014 119.0
DYD2_k127_1274127_0 TrkA-C domain K11105 - - 2.544e-201 637.0
DYD2_k127_1283276_0 PFAM D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain K00058 - 1.1.1.399,1.1.1.95 0.00000000000000000000000000000000000001013 145.0
DYD2_k127_1283276_2 PFAM Aminotransferase, class IV K00824,K00826 - 2.6.1.21,2.6.1.42 0.000000000000000000549 89.0
DYD2_k127_1286846_0 Belongs to the IlvD Edd family K01687 - 4.2.1.9 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002461 552.0
DYD2_k127_1286846_1 acetolactate synthase K01652 - 2.2.1.6 0.00000000000000000000000000000000001286 137.0
DYD2_k127_129091_0 PFAM Tetratricopeptide repeat - - - 0.0000000000000000000000000000000000000000000000004429 184.0
DYD2_k127_129091_1 - - - - 0.0000000000000000000000008488 108.0
DYD2_k127_129091_2 N-acetylmuramoyl-L-alanine amidase - - - 0.0000000000000000005243 94.0
DYD2_k127_129091_3 - - - - 0.000006774 55.0
DYD2_k127_1293186_0 domain protein K01179,K12567,K20276,K21449 - 2.7.11.1,3.2.1.4 0.00000000000000000000000000000000000000000000000000000002025 224.0
DYD2_k127_1293760_0 Protein of unknown function DUF72 - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000253 452.0
DYD2_k127_1293760_1 Four helix bundle sensory module for signal transduction - - - 0.0000000000000000000000000001738 119.0
DYD2_k127_1293760_2 Putative quorum-sensing-regulated virulence factor K09954 - - 0.000000000000000000000000827 105.0
DYD2_k127_1295108_0 TonB-dependent Receptor Plug Domain - - - 3.271e-208 668.0
DYD2_k127_1295108_1 Na H antiporter NhaD and related arsenite - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006174 445.0
DYD2_k127_1295108_2 - - - - 0.00000000000000000000000973 105.0
DYD2_k127_1295108_3 Uncharacterized protein conserved in bacteria (DUF2141) - - - 0.000000000000000000001979 99.0
DYD2_k127_130359_0 - - - - 0.0000000000000000000000000000000000000000000000000000000000000000000001748 250.0
DYD2_k127_1314136_0 Sulfate permease family - - - 3.255e-196 623.0
DYD2_k127_1314136_1 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus K00341 - 1.6.5.3 0.00000000002664 64.0
DYD2_k127_1325650_0 Aerotolerance regulator N-terminal - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000009349 278.0
DYD2_k127_1325650_1 dihydroorotase K01465 - 3.5.2.3 0.0000000000000006585 82.0
DYD2_k127_1332898_0 Poly A polymerase head domain K00970,K00974 - 2.7.7.19,2.7.7.72 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005102 554.0
DYD2_k127_1337675_0 N-acetylmuramoyl-L-alanine amidase - - - 0.0000000000000000000000000000000000000000000000000000017 202.0
DYD2_k127_1337675_1 C-terminal domain of CHU protein family - - - 0.00000000000000000000000000000007396 132.0
DYD2_k127_1337675_2 metallopeptidase activity - - - 0.0000000002189 71.0
DYD2_k127_1341076_0 N-terminal 7TM region of histidine kinase - - - 0.0000000000000000000000000000000000000000000000000000000000000007492 228.0
DYD2_k127_1341076_1 PFAM Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase - - - 0.000000000000000000000000000002837 125.0
DYD2_k127_134505_0 ABC-type transport system involved in lipoprotein release permease component K09808,K09815 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000009128 293.0
DYD2_k127_134505_1 Involved in the biosynthesis of the osmoprotectant glycine betaine. Catalyzes the oxidation of choline to betaine aldehyde and betaine aldehyde to glycine betaine at the same rate K00108 - 1.1.99.1 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000001102 279.0
DYD2_k127_1349357_0 DEAD-like helicases superfamily - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004559 512.0
DYD2_k127_1349357_1 Belongs to the class-I aminoacyl-tRNA synthetase family K01867 - 6.1.1.2 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008773 371.0
DYD2_k127_1349357_2 Protein of unknown function (DUF1573) - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000005903 286.0
DYD2_k127_1352194_0 COG3279 Response regulator of the LytR AlgR family K02477 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004889 326.0
DYD2_k127_1352194_1 PFAM Signal transduction histidine kinase, internal region - - - 0.0000000000000000000000000000000000000000000000000002016 190.0
DYD2_k127_1352194_2 Parallel beta-helix repeats - - - 0.0000000000000000000000000002838 123.0
DYD2_k127_1353683_0 Y_Y_Y domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000001703 299.0
DYD2_k127_1353683_1 regulation of response to stimulus - - - 0.000000000000000000002144 101.0
DYD2_k127_1354738_0 PFAM Glycosyl transferase family 2 K07011 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001239 407.0
DYD2_k127_1354738_1 Binds to DNA and alters its conformation. May be involved in regulation of gene expression, nucleoid organization and DNA protection K09747 - - 0.000000000000000000000000000000000000000008433 157.0
DYD2_k127_1354738_2 PFAM PspC domain - - - 0.0000000000000000000000001008 109.0
DYD2_k127_1357192_0 C-terminal domain of CHU protein family - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002349 346.0
DYD2_k127_135909_0 Calcineurin-like phosphoesterase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000942 316.0
DYD2_k127_135909_1 PFAM PspC domain K03973 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002155 314.0
DYD2_k127_135909_2 Transcriptional regulator K10947 - - 0.0000000000000000000000000000000000000000000000000007318 185.0
DYD2_k127_1362555_0 TonB-dependent receptor - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001946 345.0
DYD2_k127_1365239_0 TonB-dependent Receptor Plug - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000608 271.0
DYD2_k127_136594_0 Endonuclease Exonuclease phosphatase - - - 0.0000000000000000000000000000000000000000000000000000417 192.0
DYD2_k127_1374689_0 magnesium chelatase K07391 - - 5.889e-211 661.0
DYD2_k127_1374689_1 ABC transporter transmembrane region K06147,K11085 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001671 325.0
DYD2_k127_1374689_2 Catalyzes the isomerization of sedoheptulose 7-phosphate in D-glycero-D-manno-heptose 7-phosphate K03271 - 5.3.1.28 0.000000000000000000000000000000000000000000000000000000000000000000000000000000001314 275.0
DYD2_k127_1383796_0 His Kinase A (phosphoacceptor) domain - - - 0.0000000000000000000000000000000000000000000000000000000009258 221.0
DYD2_k127_1388250_0 PFAM UvrD REP helicase K03657 - 3.6.4.12 1.564e-303 939.0
DYD2_k127_1388250_1 Protein of unknown function (DUF3109) - - - 0.00000000000000000000000000000000000000000000000000000000000000000000009314 242.0
DYD2_k127_1394902_0 Catalyzes the reduction of dTDP-6-deoxy-L-lyxo-4- hexulose to yield dTDP-L-rhamnose K00067 - 1.1.1.133 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000003822 289.0
DYD2_k127_1394902_1 PPIases accelerate the folding of proteins. It catalyzes the cis-trans isomerization of proline imidic peptide bonds in oligopeptides K03768 - 5.2.1.8 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000802 293.0
DYD2_k127_1394902_2 NUMOD4 motif - - - 0.0000000000000000000000000000000000000001079 152.0
DYD2_k127_1399196_0 Belongs to the CDS family K00981 - 2.7.7.41 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008248 387.0
DYD2_k127_1399196_1 PFAM CAAX amino terminal protease family K07052 - - 0.0000000000000000000000000000000000000001309 154.0
DYD2_k127_1400373_0 lyase activity - - - 0.00000000000000000000000000000000000000000000007536 178.0
DYD2_k127_140657_0 Glyoxalase-like domain - - - 0.00000000000000000000000001189 113.0
DYD2_k127_140657_1 Dihydrodipicolinate reductase, C-terminus K00215 - 1.17.1.8 0.00000000000002978 73.0
DYD2_k127_1416508_0 Peptidoglycan polymerase that catalyzes glycan chain elongation from lipid-linked precursors - - - 0.0000000000000000000000000000000000000000003686 171.0
DYD2_k127_1420374_0 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase - - - 0.000000000000000000000000000000000000000000000000000000005139 209.0
DYD2_k127_1431047_0 Belongs to the UPF0753 family K09822 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004068 485.0
DYD2_k127_1434637_0 Specifically dimethylates two adjacent adenosines (A1518 and A1519) in the loop of a conserved hairpin near the 3'-end of 16S rRNA in the 30S particle. May play a critical role in biogenesis of 30S subunits K02528 - 2.1.1.182 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004767 353.0
DYD2_k127_1434637_1 Acts as a magnesium transporter K06213 - - 0.000000000000000000000000000000000000000000000000000000000000001636 222.0
DYD2_k127_1436655_0 Belongs to the glycosyl hydrolase 13 family K01176 - 3.2.1.1 7.106e-217 680.0
DYD2_k127_1436655_1 - - - - 0.000001979 49.0
DYD2_k127_1441732_0 Belongs to the ompA family - - - 0.00000000000000000000000000000000000000000000000000000000000000000002501 237.0
DYD2_k127_1441732_1 - - - - 0.0000000000000000000000005194 117.0
DYD2_k127_1445481_0 - - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000001148 252.0
DYD2_k127_1445481_1 Protease prsW family - - - 0.00000000000000000000000000000000000000000000000001129 185.0
DYD2_k127_1447108_0 Male sterility protein K01784 - 5.1.3.2 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008335 411.0
DYD2_k127_1447108_1 Reduction of activated sulfate into sulfite K00390 - 1.8.4.10,1.8.4.8 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001543 366.0
DYD2_k127_1447108_2 PFAM GDSL-like Lipase Acylhydrolase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000002382 246.0
DYD2_k127_144767_0 Couples transcription and DNA repair by recognizing RNA polymerase (RNAP) stalled at DNA lesions. Mediates ATP-dependent release of RNAP and its truncated transcript from the DNA, and recruitment of nucleotide excision repair machinery to the damaged site K03723 - - 0.0 1243.0
DYD2_k127_144767_1 AI-2E family transporter - - - 0.000001474 57.0
DYD2_k127_1448458_0 In eubacteria ppGpp (guanosine 3'-diphosphate 5-' diphosphate) is a mediator of the stringent response that coordinates a variety of cellular activities in response to changes in nutritional abundance K00951,K01139 - 2.7.6.5,3.1.7.2 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007029 301.0
DYD2_k127_1448458_1 Plays an important role in the de novo pathway of purine nucleotide biosynthesis. Catalyzes the first committed step in the biosynthesis of AMP from IMP K01939 GO:0003674,GO:0003824,GO:0004019,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006139,GO:0006163,GO:0006164,GO:0006167,GO:0006725,GO:0006753,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009117,GO:0009123,GO:0009124,GO:0009126,GO:0009127,GO:0009150,GO:0009152,GO:0009156,GO:0009161,GO:0009165,GO:0009167,GO:0009168,GO:0009259,GO:0009260,GO:0009987,GO:0016874,GO:0016879,GO:0017144,GO:0018130,GO:0019438,GO:0019637,GO:0019693,GO:0034641,GO:0034654,GO:0044208,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0044424,GO:0044464,GO:0046033,GO:0046040,GO:0046390,GO:0046483,GO:0055086,GO:0071704,GO:0072521,GO:0072522,GO:0090407,GO:1901135,GO:1901137,GO:1901293,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576 6.3.4.4 0.00000000000000000000000000000000000000000000000000000000000000000000000000000001939 269.0
DYD2_k127_1448458_2 Belongs to the anti-sigma-factor antagonist family K04749 - - 0.00000000000000000000000000000000000836 139.0
DYD2_k127_1454605_0 Trigger factor K03545 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009823 436.0
DYD2_k127_1454605_1 Cleaves peptides in various proteins in a process that requires ATP hydrolysis. Has a chymotrypsin-like activity. Plays a major role in the degradation of misfolded proteins K01358 - 3.4.21.92 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008985 375.0
DYD2_k127_1462357_0 lysine biosynthetic process via aminoadipic acid - - - 2.519e-257 803.0
DYD2_k127_1462357_1 Cytochrome bd terminal oxidase subunit I K00425 - 1.10.3.14 1.33e-225 705.0
DYD2_k127_1462357_2 COGs COG1294 Cytochrome bd-type quinol oxidase subunit 2 K00426 - 1.10.3.14 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003641 420.0
DYD2_k127_1462623_0 TIGRFAM Peroxiredoxin, osmotically inducible protein C, subgroup K04063 - - 0.0000000000000000000000000000000000000000000000000000000000000004289 221.0
DYD2_k127_1462623_1 Protein of unknown function (DUF4199) - - - 0.0000000000000000000000000000000000000003903 152.0
DYD2_k127_1462623_2 PFAM Cytochrome b5-like Heme Steroid binding domain - - - 0.0000000000000000000000000000000000001042 144.0
DYD2_k127_1462623_3 His Kinase A (phosphoacceptor) domain - - - 0.0008692 46.0
DYD2_k127_1468097_0 Predicted periplasmic lipoprotein (DUF2279) - - - 0.00000000000000000000000000000000000000000000000000002816 191.0
DYD2_k127_1468097_1 PFAM Smr - - - 0.000000000000000000000000000000000000003143 152.0
DYD2_k127_1471332_0 Belongs to the lyase 1 family. Adenylosuccinate lyase subfamily K01756 - 4.3.2.2 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000004475 292.0
DYD2_k127_1471332_1 C-terminal domain of CHU protein family - - - 0.000000000000000000000003345 106.0
DYD2_k127_1474116_0 Involved in the gluconeogenesis. Catalyzes stereospecifically the conversion of dihydroxyacetone phosphate (DHAP) to D-glyceraldehyde-3-phosphate (G3P) K01803 GO:0003674,GO:0003824,GO:0004807,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005975,GO:0005996,GO:0006006,GO:0006066,GO:0006071,GO:0006081,GO:0006082,GO:0006090,GO:0006091,GO:0006094,GO:0006096,GO:0006139,GO:0006163,GO:0006164,GO:0006165,GO:0006725,GO:0006732,GO:0006733,GO:0006753,GO:0006754,GO:0006757,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0009056,GO:0009058,GO:0009108,GO:0009117,GO:0009123,GO:0009124,GO:0009126,GO:0009127,GO:0009132,GO:0009135,GO:0009141,GO:0009142,GO:0009144,GO:0009145,GO:0009150,GO:0009152,GO:0009156,GO:0009161,GO:0009165,GO:0009166,GO:0009167,GO:0009168,GO:0009179,GO:0009185,GO:0009199,GO:0009201,GO:0009205,GO:0009206,GO:0009259,GO:0009260,GO:0009987,GO:0016051,GO:0016052,GO:0016053,GO:0016310,GO:0016853,GO:0016860,GO:0016861,GO:0017144,GO:0018130,GO:0019318,GO:0019319,GO:0019359,GO:0019362,GO:0019363,GO:0019400,GO:0019405,GO:0019438,GO:0019439,GO:0019563,GO:0019637,GO:0019682,GO:0019693,GO:0019751,GO:0019752,GO:0032787,GO:0034404,GO:0034641,GO:0034654,GO:0034655,GO:0042866,GO:0043436,GO:0044237,GO:0044238,GO:0044248,GO:0044249,GO:0044262,GO:0044270,GO:0044271,GO:0044275,GO:0044281,GO:0044282,GO:0044283,GO:0044424,GO:0044444,GO:0044464,GO:0046031,GO:0046034,GO:0046164,GO:0046166,GO:0046174,GO:0046184,GO:0046364,GO:0046390,GO:0046394,GO:0046434,GO:0046483,GO:0046496,GO:0046700,GO:0046939,GO:0051186,GO:0051188,GO:0055086,GO:0071704,GO:0072330,GO:0072521,GO:0072522,GO:0072524,GO:0072525,GO:0090407,GO:1901135,GO:1901137,GO:1901292,GO:1901293,GO:1901360,GO:1901361,GO:1901362,GO:1901564,GO:1901566,GO:1901575,GO:1901576,GO:1901615,GO:1901616 5.3.1.1 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000302 382.0
DYD2_k127_1474116_1 membrane K08987 - - 0.000006013 48.0
DYD2_k127_1475379_0 Organic solvent tolerance protein OstA - - - 5.508e-245 781.0
DYD2_k127_1475379_1 N-acetylmuramoyl-L-alanine amidase K01448 - 3.5.1.28 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002061 358.0
DYD2_k127_1475379_2 Mammalian cell entry related domain protein K02067 - - 0.0000000000000000000000000000000000005935 145.0
DYD2_k127_1480722_0 Mate efflux family protein K03327 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000142 415.0
DYD2_k127_1483156_0 Belongs to the sigma-70 factor family. ECF subfamily K03088 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001381 324.0
DYD2_k127_1483156_1 Penicillin amidase K01434 - 3.5.1.11 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006446 312.0
DYD2_k127_1483156_2 Domain of unknown function (DUF4403) - - - 0.000000000000000000000000000000000000000000000000000000000001204 227.0
DYD2_k127_1483156_3 Essential for recycling GMP and indirectly, cGMP K00942 GO:0003674,GO:0003824,GO:0004385,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006139,GO:0006163,GO:0006725,GO:0006753,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009116,GO:0009117,GO:0009119,GO:0009123,GO:0009126,GO:0009132,GO:0009135,GO:0009150,GO:0009161,GO:0009165,GO:0009167,GO:0009179,GO:0009185,GO:0009259,GO:0009987,GO:0016301,GO:0016310,GO:0016740,GO:0016772,GO:0016776,GO:0018130,GO:0019205,GO:0019438,GO:0019637,GO:0019693,GO:0034641,GO:0034654,GO:0042278,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0044424,GO:0044444,GO:0044464,GO:0046037,GO:0046128,GO:0046483,GO:0046710,GO:0046940,GO:0050145,GO:0055086,GO:0071704,GO:0072521,GO:0090407,GO:1901068,GO:1901135,GO:1901293,GO:1901360,GO:1901362,GO:1901564,GO:1901576,GO:1901657 2.7.4.8 0.000000000000000000000000000000000000000000000000000000005225 200.0
DYD2_k127_1483156_4 - - - - 0.00000000000001927 77.0
DYD2_k127_1488320_0 First step of the lipid cycle reactions in the biosynthesis of the cell wall peptidoglycan K01000 - 2.7.8.13 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003896 554.0
DYD2_k127_1488320_1 Cell wall formation. Catalyzes the addition of glutamate to the nucleotide precursor UDP-N-acetylmuramoyl-L-alanine (UMA) K01925 - 6.3.2.9 0.0000000000000000000000000000000000000000000000000000000000000000002851 232.0
DYD2_k127_1490844_0 Belongs to the Glu Leu Phe Val dehydrogenases family K00262 GO:0003674,GO:0003824,GO:0004353,GO:0004354,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006082,GO:0006520,GO:0006536,GO:0006537,GO:0006807,GO:0008150,GO:0008152,GO:0008652,GO:0009058,GO:0009064,GO:0009084,GO:0009986,GO:0009987,GO:0016053,GO:0016491,GO:0016638,GO:0016639,GO:0019752,GO:0043436,GO:0043648,GO:0043650,GO:0044237,GO:0044238,GO:0044249,GO:0044281,GO:0044283,GO:0044424,GO:0044444,GO:0044464,GO:0046394,GO:0055114,GO:0071704,GO:1901564,GO:1901566,GO:1901576,GO:1901605,GO:1901607 1.4.1.4 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001793 583.0
DYD2_k127_1490844_1 Hep Hag repeat protein - - - 0.0000000000000000006917 94.0
DYD2_k127_1490844_2 Endonuclease Exonuclease Phosphatase - - - 0.00005332 52.0
DYD2_k127_1499087_0 acyl-CoA dehydrogenase K00252 - 1.3.8.6 1.17e-225 701.0
DYD2_k127_1499087_1 Tryptophan 2,3-dioxygenase K00453 - 1.13.11.11 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002152 432.0
DYD2_k127_1499087_2 MORN repeat variant - - - 0.00000000000000000000000000000002469 129.0
DYD2_k127_151092_0 ATP-dependent DNA helicase RecQ K03654 - 3.6.4.12 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006106 399.0
DYD2_k127_151092_1 Serine aminopeptidase, S33 - - - 0.0000000000000000000000000000000000000000000000000000000000000005149 225.0
DYD2_k127_1516442_0 Cytochrome c biogenesis protein transmembrane region K04084 - 1.8.1.8 1.142e-296 924.0
DYD2_k127_1516442_1 Enoyl-(Acyl carrier protein) reductase K00059 - 1.1.1.100 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000001485 289.0
DYD2_k127_1516442_2 - - - - 0.00000000000000000000000000000000000000000000000000000006346 200.0
DYD2_k127_1516442_3 - - - - 0.000000000000002177 79.0
DYD2_k127_151668_0 Nitronate monooxygenase K02371 - 1.3.1.9 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002301 466.0
DYD2_k127_151668_1 Nucleotidyl transferase K00973 - 2.7.7.24 0.000000000000000000000000000000000000000000000000000000000000000002377 229.0
DYD2_k127_151668_2 - - - - 0.0000000000000000000000427 100.0
DYD2_k127_1521673_0 PhoQ Sensor - - - 0.00000000000000000000000000000000000000000000005775 190.0
DYD2_k127_1521843_0 HAD superfamily, subfamily IIIB (Acid phosphatase) - - - 0.00000000000000000000000000000000000000000000000000001276 197.0
DYD2_k127_1521864_0 DoxX family - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004304 353.0
DYD2_k127_1521864_1 Domain of Unknown Function (DUF1599) - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005268 299.0
DYD2_k127_1521864_2 Catalyzes the condensation of para-aminobenzoate (pABA) with 6-hydroxymethyl-7,8-dihydropterin diphosphate (DHPt-PP) to form 7,8-dihydropteroate (H2Pte), the immediate precursor of folate derivatives K00796 - 2.5.1.15 0.0000000000000000000000000000005692 123.0
DYD2_k127_1531131_0 Bifunctional purine biosynthesis protein PurH K00602 - 2.1.2.3,3.5.4.10 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004535 505.0
DYD2_k127_1545826_0 PFAM Nucleoside recognition K06373 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006453 583.0
DYD2_k127_1545826_1 - - - - 0.000000000000000000000000000000000000000000000000000000000000000005597 229.0
DYD2_k127_1545826_2 Domain of unknown function (DU1801) - - - 0.00000000000000000000000000000000000000000000000000000000000000001889 228.0
DYD2_k127_1545826_3 Belongs to the DEAD box helicase family K11927 - 3.6.4.13 0.0000000000000000000000000000000000000000000000000000000000000001045 226.0
DYD2_k127_1563845_0 Belongs to the LOG family K06966 - 3.2.2.10 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001983 402.0
DYD2_k127_1563845_1 Murein transglycosylase - - - 0.00000000000000000000000000000000000000003323 156.0
DYD2_k127_1571352_0 Produces ATP from ADP in the presence of a proton gradient across the membrane. The alpha chain is a regulatory subunit K02111 - 3.6.3.14 2.719e-291 899.0
DYD2_k127_1571352_1 Produces ATP from ADP in the presence of a proton gradient across the membrane. The gamma chain is believed to be important in regulating ATPase activity and the flow of protons through the CF(0) complex K02115 - - 0.000000000000000000000000000000000000000000000000000000000000000000004281 239.0
DYD2_k127_1571352_2 F(1)F(0) ATP synthase produces ATP from ADP in the presence of a proton or sodium gradient. F-type ATPases consist of two structural domains, F(1) containing the extramembraneous catalytic core and F(0) containing the membrane proton channel, linked together by a central stalk and a peripheral stalk. During catalysis, ATP synthesis in the catalytic domain of F(1) is coupled via a rotary mechanism of the central stalk subunits to proton translocation K02113 - - 0.0000000000000000000000000000000000000000000000000000000000000185 219.0
DYD2_k127_1571352_3 Component of the F(0) channel, it forms part of the peripheral stalk, linking F(1) to F(0) K02109 - - 0.000000000000000000000000000000000000005589 149.0
DYD2_k127_1588035_0 Belongs to the class-II aminoacyl-tRNA synthetase family K04567 - 6.1.1.6 2.123e-232 724.0
DYD2_k127_1589099_0 BAAT / Acyl-CoA thioester hydrolase C terminal - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000119 338.0
DYD2_k127_1589099_1 Phenazine biosynthesis-like protein - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002751 307.0
DYD2_k127_1589099_2 response regulator, receiver K01768,K03415,K07777,K18967 - 2.7.13.3,2.7.7.65,4.6.1.1 0.00000000000000000000005705 103.0
DYD2_k127_1596856_0 OmpA family - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004683 399.0
DYD2_k127_160216_0 Protein of unknown function DUF58 - - - 0.000000000000000000000000000000000000000000000000000000000000003828 227.0
DYD2_k127_160216_1 ATPase family associated with various cellular activities (AAA) K03924 - - 0.00000000000000000000000000000000000005663 144.0
DYD2_k127_160216_2 Aerotolerance regulator N-terminal - - - 0.00000000000000000000006116 112.0
DYD2_k127_1606976_0 Belongs to the DEAD box helicase family K11927 - 3.6.4.13 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003583 541.0
DYD2_k127_1606976_1 PFAM MCP methyltransferase, CheR-type K00575 - 2.1.1.80 0.00000000000001605 76.0
DYD2_k127_1611394_0 Phenylacetic acid catabolic protein K02609 - 1.14.13.149 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002469 554.0
DYD2_k127_1611394_1 Bacterial regulatory proteins, tetR family - - - 0.0000000000000000000000000000000000000000000000000000000000001166 218.0
DYD2_k127_1619326_0 Amidinotransferase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004692 306.0
DYD2_k127_1619326_1 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain K00382 - 1.8.1.4 0.00000000000000000000000000000000000006892 146.0
DYD2_k127_1623611_0 Belongs to the UPF0312 family - - - 0.000000000000000000000000000000000000000000000000000000000006235 214.0
DYD2_k127_1623611_1 Catalyzes the conversion of epoxyqueuosine (oQ) to queuosine (Q), which is a hypermodified base found in the wobble positions of tRNA(Asp), tRNA(Asn), tRNA(His) and tRNA(Tyr) K18979 - 1.17.99.6 0.00000000000000000000000000000000000000000000000000000000003665 207.0
DYD2_k127_1623611_2 proline betaine transporter - - - 0.0000000000000000000000000000000000000002535 151.0
DYD2_k127_1625599_0 Catalyzes the ATP-dependent amidation of deamido-NAD to form NAD. Uses L-glutamine as a nitrogen source K01950 - 6.3.5.1 0.00000000000000000000000000000000000000000000000000000000000000000008488 234.0
DYD2_k127_1627105_0 Stage II sporulation protein E (SpoIIE) - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000001704 300.0
DYD2_k127_1627105_1 Produces ATP from ADP in the presence of a proton gradient across the membrane. The gamma chain is believed to be important in regulating ATPase activity and the flow of protons through the CF(0) complex K02115 - - 0.000000000000000000000000000000000000001279 148.0
DYD2_k127_1632506_0 SMART DNA mismatch repair protein MutS - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001993 466.0
DYD2_k127_1632506_1 EamA-like transporter family - - - 0.0000000000000000000000000000000000002367 147.0
DYD2_k127_1632506_2 Acetyltransferase (GNAT) domain - - - 0.000000000001504 68.0
DYD2_k127_1635366_0 In eubacteria ppGpp (guanosine 3'-diphosphate 5-' diphosphate) is a mediator of the stringent response that coordinates a variety of cellular activities in response to changes in nutritional abundance K00951,K01139 - 2.7.6.5,3.1.7.2 1.074e-278 863.0
DYD2_k127_16381_0 PD-(D/E)XK nuclease superfamily - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002706 327.0
DYD2_k127_1649559_0 belongs to the aldehyde dehydrogenase family - - - 1.421e-275 856.0
DYD2_k127_1649559_1 Subtilase family K08651 - 3.4.21.66 0.000000000008074 72.0
DYD2_k127_1659683_0 PFAM Carbamoyl-phosphate synthase L chain, ATP binding K01955 - 6.3.5.5 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001342 555.0
DYD2_k127_1661521_0 Catalyzes the condensation reaction of fatty acid synthesis by the addition to an acyl acceptor of two carbons from malonyl-ACP K09458 - 2.3.1.179 0.00000000000000000000000000000000000000000000000000006949 188.0
DYD2_k127_1661521_1 Carrier of the growing fatty acid chain in fatty acid biosynthesis K02078 GO:0000035,GO:0000036,GO:0003674,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005975,GO:0006082,GO:0006629,GO:0006631,GO:0006633,GO:0006643,GO:0006644,GO:0006664,GO:0006793,GO:0006796,GO:0008150,GO:0008152,GO:0008610,GO:0008654,GO:0009058,GO:0009245,GO:0009247,GO:0009311,GO:0009312,GO:0009987,GO:0016051,GO:0016053,GO:0019637,GO:0019752,GO:0019842,GO:0031177,GO:0032787,GO:0033218,GO:0036094,GO:0043167,GO:0043168,GO:0043436,GO:0044237,GO:0044238,GO:0044249,GO:0044255,GO:0044281,GO:0044283,GO:0044424,GO:0044444,GO:0044464,GO:0044620,GO:0046394,GO:0046467,GO:0046493,GO:0048037,GO:0051192,GO:0071704,GO:0072330,GO:0072341,GO:0090407,GO:0140104,GO:1901135,GO:1901137,GO:1901269,GO:1901271,GO:1901576,GO:1903509 - 0.00000000000000000000000000000000000007103 143.0
DYD2_k127_1661521_2 - - - - 0.000000000000000000000000003097 116.0
DYD2_k127_1664935_0 Required for the formation of a threonylcarbamoyl group on adenosine at position 37 (t(6)A37) in tRNAs that read codons beginning with adenine K07566 - 2.7.7.87 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001834 397.0
DYD2_k127_1664935_1 Belongs to the phosphoglycerate kinase family K00927 - 2.7.2.3 0.0000000000000000000000000001396 115.0
DYD2_k127_1681927_0 amine dehydrogenase activity - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000002339 288.0
DYD2_k127_1682786_0 3'-5' exonuclease related to the exonuclease domain of PolB K07501 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000009338 295.0
DYD2_k127_1682786_1 TIGRFAM toxin-antitoxin system, toxin component, Txe YoeB family K19158 - - 0.00000000000000000000000000000005531 126.0
DYD2_k127_1682786_2 Antitoxin component of a toxin-antitoxin (TA) module K19159 - - 0.0000000000000001508 81.0
DYD2_k127_1686092_0 Polyketide cyclase / dehydrase and lipid transport - - - 0.000000000000000000000000000000000000000000002854 168.0
DYD2_k127_1686092_1 NADH ubiquinone oxidoreductase subunit 5 (Chain L) multisubunit Na H antiporter, MnhA subunit K00341 - 1.6.5.3 0.000000003527 61.0
DYD2_k127_1689590_0 ATP-dependent DNA helicase RecQ K03654 - 3.6.4.12 1.378e-248 774.0
DYD2_k127_1689590_1 Belongs to the SIS family. GutQ KpsF subfamily K06041 - 5.3.1.13 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002161 453.0
DYD2_k127_1693465_0 Heat shock 70 kDa protein K04043 - - 8.877e-209 652.0
DYD2_k127_1711022_0 ABC transporter transmembrane region K18890 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000127 526.0
DYD2_k127_1711022_1 - - - - 0.00000000000000000000000004387 114.0
DYD2_k127_1715129_0 NAD-dependent lysine deacetylase and desuccinylase that specifically removes acetyl and succinyl groups on target proteins. Modulates the activities of several proteins which are inactive in their acylated form K12410 - - 0.000000000000000000000000000000000000000001098 157.0
DYD2_k127_1715129_1 PFAM GGDEF domain containing protein - - - 0.000000000000000000000000001837 125.0
DYD2_k127_1715370_0 IrrE N-terminal-like domain K07110 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001109 441.0
DYD2_k127_1715370_1 His Kinase A (phosphoacceptor) domain - - - 0.00000000000000000000000000000000000000000000000004662 190.0
DYD2_k127_1715370_2 YceI-like domain - - - 0.00000000000000000001579 95.0
DYD2_k127_1718613_0 RimK-like ATPgrasp N-terminal domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002091 421.0
DYD2_k127_1718613_1 Penicillin-binding Protein K05367 - 2.4.1.129 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006695 395.0
DYD2_k127_1718613_2 Sodium/calcium exchanger protein K07301 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006696 372.0
DYD2_k127_1720097_0 acyl-CoA dehydrogenase - - - 6.746e-211 661.0
DYD2_k127_1720097_1 PFAM Peptidase, membrane zinc metallopeptidase K06973 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000001872 300.0
DYD2_k127_1720097_2 Catalyzes the ADP transfer from ATP to D-glycero-beta-D- manno-heptose 1-phosphate, yielding ADP-D-glycero-beta-D-manno- heptose K03272 - 2.7.1.167,2.7.7.70 0.000000000000000000000000000000000000000000000000000000000000000000002199 238.0
DYD2_k127_1720097_3 Transcriptional regulator, AraC family - - - 0.00000000000000000000000000000000000000000000000000000001782 202.0
DYD2_k127_1727382_0 Belongs to the glyceraldehyde-3-phosphate dehydrogenase family K00134 - 1.2.1.12 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007564 539.0
DYD2_k127_1732992_0 One of the essential components for the initiation of protein synthesis. Protects formylmethionyl-tRNA from spontaneous hydrolysis and promotes its binding to the 30S ribosomal subunits. Also involved in the hydrolysis of GTP during the formation of the 70S ribosomal complex K02519 - - 2.075e-295 927.0
DYD2_k127_1732992_1 Participates in both transcription termination and antitermination K02600 - - 0.00000000000000005742 80.0
DYD2_k127_1736189_0 Sodium pump that utilizes the energy of pyrophosphate hydrolysis as the driving force for Na( ) movement across the membrane K15987 - 3.6.1.1 6.528e-208 651.0
DYD2_k127_1736189_1 peptidase C14 caspase catalytic subunit p20 - - - 0.00000000000001051 79.0
DYD2_k127_1743754_0 Interacts with outer membrane receptor proteins that carry out high-affinity binding and energy dependent uptake into the periplasmic space of specific substrates. It could act to transduce energy from the cytoplasmic membrane to specific energy- requiring processes in the outer membrane, resulting in the release into the periplasm of ligands bound by these outer membrane proteins K03832 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001289 308.0
DYD2_k127_1743754_1 The glycine cleavage system catalyzes the degradation of glycine. The H protein shuttles the methylamine group of glycine from the P protein to the T protein K02437 - - 0.00000000000000000000000000000002936 126.0
DYD2_k127_1743754_2 Psort location CytoplasmicMembrane, score - - - 0.000000000000000000000000000001389 125.0
DYD2_k127_1747943_0 Methylmalonyl-CoA mutase K01847 - 5.4.99.2 2.189e-241 750.0
DYD2_k127_1747943_1 Methylmalonyl-CoA mutase K01847 - 5.4.99.2 0.0000002369 57.0
DYD2_k127_1762268_0 SMART Metal-dependent phosphohydrolase, HD region K06885 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001925 535.0
DYD2_k127_1762268_1 Catalyzes the N-acylation of UDP-3-O-acylglucosamine using 3-hydroxyacyl-ACP as the acyl donor. Is involved in the biosynthesis of lipid A, a phosphorylated glycolipid that anchors the lipopolysaccharide to the outer membrane of the cell K02536 - 2.3.1.191 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006063 492.0
DYD2_k127_1762268_2 Catalyzes the hydrolysis of UDP-3-O-myristoyl-N- acetylglucosamine to form UDP-3-O-myristoylglucosamine and acetate, the committed step in lipid A biosynthesis K16363 - 3.5.1.108,4.2.1.59 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007855 408.0
DYD2_k127_1762268_3 CheY-like receiver AAA-type ATPase and DNA-binding domains - - - 0.00000000000000000000000000000000000000000000000000000007897 196.0
DYD2_k127_1769831_0 Lamin Tail Domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002319 432.0
DYD2_k127_1777893_0 - - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001019 326.0
DYD2_k127_1783126_0 WD40 repeats - - - 4.301e-222 696.0
DYD2_k127_1783126_1 - - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000005506 304.0
DYD2_k127_1792414_0 Catalyzes the conversion of dihydroorotate to orotate with quinone as electron acceptor K00254 - 1.3.5.2 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004239 496.0
DYD2_k127_1795021_0 FtsX-like permease family - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001713 593.0
DYD2_k127_1797246_0 ligase activity - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000008228 267.0
DYD2_k127_1797246_1 DinB family - - - 0.0000000000000000000000000000000000000003291 154.0
DYD2_k127_1797246_2 Belongs to the UPF0312 family - - - 0.000003691 51.0
DYD2_k127_1803284_0 PFAM Uncharacterised protein family UPF0029, Impact, N-terminal - - - 0.00000000000000000000000000000000000000000000000000000002251 199.0
DYD2_k127_1803284_1 Protein involved in cellulose biosynthesis - - - 0.0000000000000000000000000002915 126.0
DYD2_k127_1809565_0 Catalyzes the reversible phosphorylation of UMP to UDP K09903 - 2.7.4.22 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002123 404.0
DYD2_k127_1809565_1 PFAM Biopterin-dependent aromatic amino acid hydroxylase K00500 - 1.14.16.1 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004461 320.0
DYD2_k127_1809565_2 Responsible for the release of ribosomes from messenger RNA at the termination of protein biosynthesis. May increase the efficiency of translation by recycling ribosomes from one round of translation to another K02838 GO:0002181,GO:0002184,GO:0003674,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006412,GO:0006415,GO:0006518,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0016043,GO:0019538,GO:0022411,GO:0032984,GO:0034641,GO:0034645,GO:0043021,GO:0043023,GO:0043043,GO:0043170,GO:0043603,GO:0043604,GO:0043624,GO:0043933,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044424,GO:0044464,GO:0044877,GO:0071704,GO:0071840,GO:1901564,GO:1901566,GO:1901576 - 0.000000000000000000000000000000000000000000000000000000000000000000000001249 249.0
DYD2_k127_1809565_3 Acetyl propionyl-CoA carboxylase alpha subunit K01960 - 6.4.1.1 0.0000000000000000000000000000000000000000007412 158.0
DYD2_k127_181176_0 malonyl CoA-acyl carrier protein transacylase K00645 - 2.3.1.39 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001646 474.0
DYD2_k127_181176_1 Protein of unknown function, DUF393 - - - 0.000000000000000000000000000000000000000000000002113 176.0
DYD2_k127_181176_2 C-terminal domain of CHU protein family - - - 0.00000000000000000000000000000000000000000000005429 174.0
DYD2_k127_181176_3 Predicted membrane protein (DUF2061) - - - 0.000000000000000000000000000000000001093 143.0
DYD2_k127_1812135_0 Catalyzes the reversible adenylation of nicotinate mononucleotide (NaMN) to nicotinic acid adenine dinucleotide (NaAD) K00969 - 2.7.7.18 0.000000000000000000000000000000000000000000000000000000000000000000000000000002112 267.0
DYD2_k127_1812135_1 Essential for recycling GMP and indirectly, cGMP K00942 GO:0003674,GO:0003824,GO:0004385,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006139,GO:0006163,GO:0006725,GO:0006753,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009116,GO:0009117,GO:0009119,GO:0009123,GO:0009126,GO:0009132,GO:0009135,GO:0009150,GO:0009161,GO:0009165,GO:0009167,GO:0009179,GO:0009185,GO:0009259,GO:0009987,GO:0016301,GO:0016310,GO:0016740,GO:0016772,GO:0016776,GO:0018130,GO:0019205,GO:0019438,GO:0019637,GO:0019693,GO:0034641,GO:0034654,GO:0042278,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0044424,GO:0044444,GO:0044464,GO:0046037,GO:0046128,GO:0046483,GO:0046710,GO:0046940,GO:0050145,GO:0055086,GO:0071704,GO:0072521,GO:0090407,GO:1901068,GO:1901135,GO:1901293,GO:1901360,GO:1901362,GO:1901564,GO:1901576,GO:1901657 2.7.4.8 0.000000000000000000000000000000000000000000000001487 175.0
DYD2_k127_181263_0 Membrane-bound serine protease (ClpP class) K07403 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000104 481.0
DYD2_k127_181263_1 Activates KDO (a required 8-carbon sugar) for incorporation into bacterial lipopolysaccharide in Gram-negative bacteria K00979 - 2.7.7.38 0.0000000000000000000000000000000000000000000000000000000000000000000000000000395 263.0
DYD2_k127_1813184_0 NQR complex catalyzes the reduction of ubiquinone-1 to ubiquinol by two successive reactions, coupled with the transport of Na( ) ions from the cytoplasm to the periplasm. NqrA to NqrE are probably involved in the second step, the conversion of ubisemiquinone to ubiquinol K00349 - 1.6.5.8 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002318 328.0
DYD2_k127_1813184_1 NQR complex catalyzes the reduction of ubiquinone-1 to ubiquinol by two successive reactions, coupled with the transport of Na( ) ions from the cytoplasm to the periplasm. NqrA to NqrE are probably involved in the second step, the conversion of ubisemiquinone to ubiquinol K00350 - 1.6.5.8 0.000000000000000000000000000000000000000000000000000000000000000000006222 237.0
DYD2_k127_1830981_0 Homoserine dehydrogenase, NAD binding domain K00003 - 1.1.1.3 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005025 438.0
DYD2_k127_1830981_1 Transfers an acetyl group from acetyl-CoA to L- homoserine, forming acetyl-L-homoserine K00641 - 2.3.1.31 0.000539 43.0
DYD2_k127_18345_0 Site-specific recombinase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002171 549.0
DYD2_k127_1863379_0 COG3279 Response regulator of the LytR AlgR family K02477 - - 0.00000000000000000000000000000000000000000000000000000000002268 208.0
DYD2_k127_1863379_1 PD-(D/E)XK nuclease superfamily - - - 0.00000000000000000000000000000002642 126.0
DYD2_k127_1863379_2 PD-(D/E)XK nuclease superfamily - - - 0.0000000000000000000000721 99.0
DYD2_k127_1875271_0 PFAM Peptidase family M23 - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007551 486.0
DYD2_k127_1875271_1 Serine aminopeptidase, S33 K06889 - - 0.00001963 47.0
DYD2_k127_1877086_0 7TM diverse intracellular signalling - - - 0.00000000000000000000000000000000000000000000000002501 185.0
DYD2_k127_1877086_1 - - - - 0.0000000000000000000000000000001372 126.0
DYD2_k127_1885385_0 Serine dehydratase K01752 - 4.3.1.17 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008872 361.0
DYD2_k127_1885385_1 PFAM Outer membrane efflux protein K12340 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001397 374.0
DYD2_k127_1885385_2 Branched-chain amino acid aminotransferase 4-amino-4-deoxychorismate lyase K00826,K02619 - 2.6.1.42,4.1.3.38 0.0000001968 55.0
DYD2_k127_1900383_0 Histidine kinase - - - 0.000000000000000000000000000000000000000000000000000000001375 221.0
DYD2_k127_1933760_0 photoreceptor activity - - - 0.0000000000000000000000000000000000000000000000000000006866 206.0
DYD2_k127_1934540_0 Has lipid A 3-O-deacylase activity. Hydrolyzes the ester bond at the 3 position of lipid A, a bioactive component of lipopolysaccharide (LPS), thereby releasing the primary fatty acyl moiety - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003027 311.0
DYD2_k127_1934540_1 YceI-like domain - - - 0.00000000000000000000000000000000000002004 150.0
DYD2_k127_1934540_2 Pkd domain containing protein - - - 0.000000000000000000000000000000000059 138.0
DYD2_k127_1934540_3 TIGRFAM RNA polymerase sigma factor, sigma-70 family K03088 - - 0.0000000000000000000000000000000001519 137.0
DYD2_k127_1939830_0 Glu Leu Phe Val dehydrogenase K00261 - 1.4.1.3 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003263 363.0
DYD2_k127_1939830_1 Catalyzes the specific phosphorylation of 1,6-anhydro-N- acetylmuramic acid (anhMurNAc) with the simultaneous cleavage of the 1,6-anhydro ring, generating MurNAc-6-P. Is required for the utilization of anhMurNAc either imported from the medium or derived from its own cell wall murein, and thus plays a role in cell wall recycling K09001 - 2.7.1.170 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003485 374.0
DYD2_k127_1939830_2 Tetratricopeptide repeat protein - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006388 370.0
DYD2_k127_1939830_3 membrane - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000004645 283.0
DYD2_k127_1939830_4 Catalyzes the phosphorylation of pantothenate (Pan), the first step in CoA biosynthesis K03525 - 2.7.1.33 0.0000000000000000000000000000000000000000000000000000000007641 209.0
DYD2_k127_1944238_0 Bacterial type II secretion system K02653 - - 0.00000000000000000000003184 104.0
DYD2_k127_1948858_0 lyase activity - - - 0.00000000000000000000000000000000000000000000000000002167 193.0
DYD2_k127_1948858_1 ABC transporter C-terminal domain K15738 - - 0.000000000000001233 81.0
DYD2_k127_1961015_0 Catalyzes the methylthiolation of an aspartic acid residue of ribosomal protein S12 K14441 - 2.8.4.4 4.378e-218 681.0
DYD2_k127_1961015_1 Belongs to the BshC family K22136 - - 0.00000000000000000000000000000000000000000000000001267 184.0
DYD2_k127_1961077_0 PFAM CBS domain - - - 0.00000000000000000000000000000000000000000000000000000000001055 211.0
DYD2_k127_1961077_1 Involved in the regulation of the intracellular balance of NAD and NADP, and is a key enzyme in the biosynthesis of NADP. Catalyzes specifically the phosphorylation on 2'-hydroxyl of the adenosine moiety of NAD to yield NADP K00858 - 2.7.1.23 0.00000000000000000000000000000000000000000000956 167.0
DYD2_k127_196158_0 Acts as a processive, ATP-dependent zinc metallopeptidase for both cytoplasmic and membrane proteins. Plays a role in the quality control of integral membrane proteins K03798 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001895 512.0
DYD2_k127_196158_1 May play a key role in the regulation of the intracellular concentration of adenosylhomocysteine K01251 GO:0000096,GO:0003674,GO:0003824,GO:0004013,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006082,GO:0006139,GO:0006520,GO:0006534,GO:0006555,GO:0006575,GO:0006725,GO:0006732,GO:0006790,GO:0006807,GO:0008150,GO:0008152,GO:0009066,GO:0009069,GO:0009116,GO:0009119,GO:0009987,GO:0016787,GO:0016801,GO:0016802,GO:0017144,GO:0019752,GO:0033353,GO:0034641,GO:0042278,GO:0043436,GO:0044237,GO:0044238,GO:0044281,GO:0044424,GO:0044444,GO:0044464,GO:0046128,GO:0046439,GO:0046483,GO:0046498,GO:0046500,GO:0051186,GO:0055086,GO:0071704,GO:0072521,GO:1901135,GO:1901360,GO:1901564,GO:1901605,GO:1901657 3.3.1.1 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000005127 284.0
DYD2_k127_196158_2 PFAM Biotin lipoate A B protein ligase K03524 - 6.3.4.15 0.00000000000000000000000000000000000000000000000000000000000000000000000108 254.0
DYD2_k127_196158_3 Functions as a ribosomal silencing factor. Interacts with ribosomal protein L14 (rplN), blocking formation of intersubunit bridge B8. Prevents association of the 30S and 50S ribosomal subunits and the formation of functional ribosomes, thus repressing translation K09710 - - 0.000000000000000000000000000000000000000000000004954 175.0
DYD2_k127_1988898_0 One of the essential components for the initiation of protein synthesis. Protects formylmethionyl-tRNA from spontaneous hydrolysis and promotes its binding to the 30S ribosomal subunits. Also involved in the hydrolysis of GTP during the formation of the 70S ribosomal complex K02519 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005049 535.0
DYD2_k127_1988898_1 Protein of unknown function, DUF481 - - - 0.000000000000008522 78.0
DYD2_k127_2001250_0 Belongs to the KdsA family K01627 - 2.5.1.55 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000608 353.0
DYD2_k127_2001250_1 haloacid dehalogenase-like hydrolase K03270,K21055,K21749 GO:0003674,GO:0003824,GO:0008781,GO:0016740,GO:0016772,GO:0016779,GO:0070567 2.7.7.43,2.7.7.92,3.1.3.103,3.1.3.45 0.000000000000000000000000000000000000000000000000000004957 195.0
DYD2_k127_2001250_2 COG1218 3'-Phosphoadenosine 5'-phosphosulfate (PAPS) 3'-phosphatase K01082 - 3.1.3.7 0.0000000000000000000000000000000000000000000001218 172.0
DYD2_k127_2003046_0 PFAM ABC transporter - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001553 429.0
DYD2_k127_2003046_1 Biotin-lipoyl like - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000006436 284.0
DYD2_k127_2012106_0 helicase superfamily c-terminal domain K11927 - 3.6.4.13 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007459 457.0
DYD2_k127_2012106_1 OmpA family - - - 0.000000000002409 68.0
DYD2_k127_2022641_0 Involved in cell wall formation. Catalyzes the final step in the synthesis of UDP-N-acetylmuramoyl-pentapeptide, the precursor of murein K01929 - 6.3.2.10 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003011 331.0
DYD2_k127_2022641_1 TIGRFAM TIGR02453 family protein - - - 0.00000000000000000000000000000000000000000000000000000000000000007583 229.0
DYD2_k127_2022641_2 Mut7-C RNAse domain - - - 0.00000000000000000000003903 102.0
DYD2_k127_2022641_3 Protein of unknown function (DUF433) - - - 0.0000000000000000002001 89.0
DYD2_k127_2040927_0 DNA-directed DNA polymerase K02337 - 2.7.7.7 0.0000000000000000000000000000000000000000000000000000000000000000000000000000001262 274.0
DYD2_k127_2040927_1 Belongs to the agmatine deiminase family K10536 - 3.5.3.12 0.0000000000000000000000000000000000000000000000000000000000000000151 225.0
DYD2_k127_2051035_0 Caspase domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005127 314.0
DYD2_k127_205114_0 PFAM Metallo-beta-lactamase superfamily - - - 3.745e-214 674.0
DYD2_k127_205114_1 F plasmid transfer operon protein K03671 - - 0.000000000000000000000000000000000042 136.0
DYD2_k127_205114_2 Rhodanese-like protein - - - 0.000000006274 58.0
DYD2_k127_2052686_0 damaged site, the DNA wraps around one UvrB monomer. DNA wrap is dependent on ATP binding by UvrB and probably causes local melting of the DNA helix, facilitating insertion of UvrB beta-hairpin between the DNA strands. Then UvrB probes one DNA strand for the presence of a lesion. If a lesion is found the UvrA subunits dissociate and the UvrB-DNA preincision complex is formed. This complex is subsequently bound by UvrC and the second UvrB is released. If no lesion is found, the DNA wraps around the other UvrB subunit that will check the other stand for damage K03702 - - 6.675e-234 730.0
DYD2_k127_2063296_0 Organic solvent tolerance protein OstA - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000357 266.0
DYD2_k127_2065485_0 Necessary for normal cell division and for the maintenance of normal septation K03978 GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0044424,GO:0044444,GO:0044464 - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000002721 277.0
DYD2_k127_2065485_1 - - - - 0.000000000000005192 75.0
DYD2_k127_2083776_0 Cell division protein FtsI penicillin-binding protein 2 K03587 - 3.4.16.4 2.253e-226 713.0
DYD2_k127_2083776_1 Catalyzes the addition of meso-diaminopimelic acid to the nucleotide precursor UDP-N-acetylmuramoyl-L-alanyl-D-glutamate (UMAG) in the biosynthesis of bacterial cell-wall peptidoglycan K01928 - 6.3.2.13 0.000000000000000000000000000000000000000000000000000000000000000000000000000000001438 276.0
DYD2_k127_2084047_0 PFAM CRISPR associated protein Cas6 K19091 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003214 387.0
DYD2_k127_2084047_1 TIGRFAM MiaB-like tRNA modifying enzyme K18707 - 2.8.4.5 0.000000000000000000000000008056 110.0
DYD2_k127_2084047_2 ATPase that binds to both the 70S ribosome and the 50S ribosomal subunit in a nucleotide-independent manner K06942 - - 0.0000000000000000001883 87.0
DYD2_k127_2086867_0 DNA alkylation repair enzyme - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009267 336.0
DYD2_k127_2086867_1 Plasmid stabilization system - - - 0.0000002 52.0
DYD2_k127_2097025_0 PFAM Helicase conserved C-terminal domain K08282 - 2.7.11.1 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000749 532.0
DYD2_k127_2102124_0 hybrid two-component system sensor histidine kinase and response regulator receiver - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003998 349.0
DYD2_k127_2113860_0 Catalyzes the ATP-dependent 2-thiolation of cytidine in position 32 of tRNA, to form 2-thiocytidine (s(2)C32). The sulfur atoms are provided by the cysteine cysteine desulfurase (IscS) system K14058 - - 0.000000000000000000000000000000000000000000003536 166.0
DYD2_k127_2113860_1 helix_turn_helix, arabinose operon control protein - - - 0.000002063 58.0
DYD2_k127_2122261_0 Glucose / Sorbosone dehydrogenase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007498 486.0
DYD2_k127_2124716_0 Glycosyl transferases group 1 - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008588 414.0
DYD2_k127_2124716_1 - - - - 0.00000000000000000000000000000000000000000000000009022 183.0
DYD2_k127_2124887_0 Tetratricopeptide repeat - - - 0.0000000000000000000000000000000000000000000000000000000000000009238 235.0
DYD2_k127_2124887_1 Allows the formation of correctly charged Asn-tRNA(Asn) or Gln-tRNA(Gln) through the transamidation of misacylated Asp- tRNA(Asn) or Glu-tRNA(Gln) in organisms which lack either or both of asparaginyl-tRNA or glutaminyl-tRNA synthetases. The reaction takes place in the presence of glutamine and ATP through an activated phospho-Asp-tRNA(Asn) or phospho-Glu-tRNA(Gln) K02435 - 6.3.5.6,6.3.5.7 0.00000000000000000000003818 99.0
DYD2_k127_2128483_0 metallopeptidase activity - - - 0.0000000000000000000000000000006568 139.0
DYD2_k127_2128483_1 metallopeptidase activity K03929,K12287 - - 0.00000000000000000002829 102.0
DYD2_k127_2133013_0 Mur ligase middle domain K01924,K02558 - 6.3.2.45,6.3.2.8 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004893 357.0
DYD2_k127_2133013_1 Mur ligase middle domain K01924,K02558 - 6.3.2.45,6.3.2.8 0.000000000000000000000000000000000000000000000000000000000000000001477 232.0
DYD2_k127_2133013_2 DNA polymerase III K02342 - 2.7.7.7 0.00000000000000000000783 93.0
DYD2_k127_2134657_0 COGs COG3781 membrane protein K08994 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001391 345.0
DYD2_k127_2134657_1 Sulfatase-modifying factor enzyme 1 - - - 0.000000000000000000000000000000000000002176 148.0
DYD2_k127_2134657_2 response regulator, receiver K00384 - 1.8.1.9 0.000000000000000000000000000000000008196 137.0
DYD2_k127_213638_0 Belongs to the cation diffusion facilitator (CDF) transporter (TC 2.A.4) family - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000061 387.0
DYD2_k127_213638_1 integral membrane protein - - - 0.0000000000000000000000000000000000000000000000000000000000000006896 222.0
DYD2_k127_2141445_0 cheY-homologous receiver domain - - - 0.00000000000000000000000000000000000000000000000001808 181.0
DYD2_k127_2141445_1 CheB methylesterase K03412 - 3.1.1.61,3.5.1.44 0.000000000000000000000000000001713 123.0
DYD2_k127_2141445_2 Probably deamidates glutamine residues to glutamate on methyl-accepting chemotaxis receptors (MCPs), playing an important role in chemotaxis K03411 - 3.5.1.44 0.000000000000000000008431 97.0
DYD2_k127_2141445_3 Two component signalling adaptor domain K03408 - - 0.000000005262 59.0
DYD2_k127_2142342_0 Belongs to the class-II aminoacyl-tRNA synthetase family. Phe-tRNA synthetase alpha subunit type 1 subfamily K01889 GO:0003674,GO:0003824,GO:0004812,GO:0004826,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006082,GO:0006139,GO:0006399,GO:0006412,GO:0006418,GO:0006432,GO:0006518,GO:0006520,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0016070,GO:0016874,GO:0016875,GO:0019538,GO:0019752,GO:0034641,GO:0034645,GO:0034660,GO:0043038,GO:0043039,GO:0043043,GO:0043170,GO:0043436,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044281,GO:0044424,GO:0044464,GO:0046483,GO:0071704,GO:0090304,GO:0140098,GO:0140101,GO:1901360,GO:1901564,GO:1901566,GO:1901576 6.1.1.20 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001648 527.0
DYD2_k127_2142342_1 PFAM Glycosyl transferase family 4 - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002704 395.0
DYD2_k127_2142342_2 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain K00074 - 1.1.1.157 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003675 356.0
DYD2_k127_2149154_0 Transaldolase is important for the balance of metabolites in the pentose-phosphate pathway K00616,K08314 - 2.2.1.2 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004328 388.0
DYD2_k127_2149154_1 PFAM ABC transporter K09812 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006828 347.0
DYD2_k127_2149154_2 - - - - 0.00000000000000000000000000003538 120.0
DYD2_k127_2153799_0 Part of the Sec protein translocase complex. Interacts with the SecYEG preprotein conducting channel. Has a central role in coupling the hydrolysis of ATP to the transfer of proteins into and across the cell membrane, serving as an ATP-driven molecular motor driving the stepwise translocation of polypeptide chains across the membrane K03070 GO:0000166,GO:0003674,GO:0003824,GO:0005215,GO:0005488,GO:0005524,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005886,GO:0005887,GO:0006810,GO:0008104,GO:0008144,GO:0008150,GO:0008320,GO:0008565,GO:0015031,GO:0015399,GO:0015405,GO:0015440,GO:0015450,GO:0015462,GO:0015833,GO:0016020,GO:0016021,GO:0016462,GO:0016787,GO:0016817,GO:0016818,GO:0016887,GO:0017076,GO:0017111,GO:0022804,GO:0022857,GO:0022884,GO:0030554,GO:0031224,GO:0031226,GO:0031522,GO:0032553,GO:0032555,GO:0032559,GO:0032991,GO:0033036,GO:0033220,GO:0035639,GO:0036094,GO:0042623,GO:0042626,GO:0042886,GO:0042887,GO:0043167,GO:0043168,GO:0043492,GO:0043952,GO:0044424,GO:0044425,GO:0044444,GO:0044459,GO:0044464,GO:0045184,GO:0051179,GO:0051234,GO:0055085,GO:0071702,GO:0071705,GO:0071806,GO:0071944,GO:0097159,GO:0097367,GO:1901265,GO:1901363,GO:1904680 - 2.142e-196 620.0
DYD2_k127_2153911_0 TIGRFAM dihydroorotase, multifunctional complex type K01465 - 3.5.2.3 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000918 381.0
DYD2_k127_2153911_1 Glycosyltransferase, group 2 family protein - - - 0.0000000000000000000000000000000000003124 141.0
DYD2_k127_2153911_2 Protein of unknown function (DUF4199) - - - 0.0000000000000000000000001515 113.0
DYD2_k127_2178556_0 Vitamin B12 dependent methionine synthase activation K00548 - 2.1.1.13 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002798 598.0
DYD2_k127_2191183_0 Esterase PHB depolymerase - - - 0.0000000000000000000000000000000000000000000000000000000000000000002325 246.0
DYD2_k127_2191183_1 COG5337 Spore coat assembly protein K06330 - - 0.00000000000000000000000000000000000003425 153.0
DYD2_k127_2191183_2 GDSL-like Lipase/Acylhydrolase family - - - 0.000000000000000000000000000002102 136.0
DYD2_k127_2191183_3 PFAM Uncharacterised protein family (UPF0104) K07027 - - 0.0000000000000000000000000001637 115.0
DYD2_k127_2194494_0 HemY domain protein K20276 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008332 558.0
DYD2_k127_2194525_0 Leukotriene A4 hydrolase, C-terminal - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002066 373.0
DYD2_k127_2194525_1 TonB dependent receptor K02014 - - 0.00000000000000000000000000001498 120.0
DYD2_k127_2195320_0 TonB-dependent Receptor Plug K02014 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001666 317.0
DYD2_k127_2208922_0 Uroporphyrinogen-III synthase K01719 - 4.2.1.75 0.000000000000000000000000000000000000000000003958 165.0
DYD2_k127_2208922_2 Uroporphyrinogen-III synthase K01719 - 4.2.1.75 0.0000000000006116 68.0
DYD2_k127_2222388_0 Belongs to the aldehyde dehydrogenase family K00128,K00154 - 1.2.1.3,1.2.1.68 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001528 319.0
DYD2_k127_2223437_0 OstA-like protein - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001953 357.0
DYD2_k127_2223437_1 Ligates lysine onto the cytidine present at position 34 of the AUA codon-specific tRNA(Ile) that contains the anticodon CAU, in an ATP-dependent manner. Cytidine is converted to lysidine, thus changing the amino acid specificity of the tRNA from methionine to isoleucine K04075 - 6.3.4.19 0.00000000000000000008584 91.0
DYD2_k127_2227071_0 Catalyzes the ATP-dependent phosphorylation of thiamine- monophosphate (TMP) to form thiamine-pyrophosphate (TPP), the active form of vitamin B1 K00946 - 2.7.4.16 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006745 513.0
DYD2_k127_2227071_1 - - - - 0.000000000000000000000000000001052 121.0
DYD2_k127_2234880_0 acetyltransferase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001418 323.0
DYD2_k127_2234880_1 very-long-chain-acyl-CoA dehydrogenase activity - - - 0.0000000000000000000000000000000000000000000000000000000000000000000001324 247.0
DYD2_k127_2249696_0 PFAM Glycosyl Hydrolase - - - 4.614e-233 727.0
DYD2_k127_2262669_0 Caspase domain - - - 0.00000000000000000000000000000000000000000000000009481 187.0
DYD2_k127_2262669_1 tetratricopeptide repeat - - - 0.000105 54.0
DYD2_k127_2265788_0 Catalyzes the reversible reaction in which hydroxymethyl group from 5,10-methylenetetrahydrofolate is transferred onto alpha-ketoisovalerate to form ketopantoate K00606 - 2.1.2.11 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008777 462.0
DYD2_k127_2265788_1 Cysteine-rich secretory protein family - - - 0.000000000000000000000000000000000000000000000000000000000000003329 222.0
DYD2_k127_227080_0 Transfers the gamma-phosphate of ATP to the 4'-position of a tetraacyldisaccharide 1-phosphate intermediate (termed DS-1- P) to form tetraacyldisaccharide 1,4'-bis-phosphate (lipid IVA) K00912 - 2.7.1.130 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000007211 295.0
DYD2_k127_227080_1 Belongs to the GTP cyclohydrolase I type 2 NIF3 family - - - 0.000000000001516 68.0
DYD2_k127_2271215_0 Cystathionine beta-lyase K01761 - 4.4.1.11 0.000000000000000000000000000000000000000000000000000000000000000002829 229.0
DYD2_k127_2271215_1 helix_turn_helix ASNC type K03719,K05800 - - 0.000000000000000000000000000000000000000003987 159.0
DYD2_k127_2271215_2 Periplasmic binding protein - - - 0.000000000000000000000000002041 113.0
DYD2_k127_2279049_0 Endoribonuclease L-PSP - - - 0.000000000000000000000000004087 111.0
DYD2_k127_2279049_2 PFAM FAD dependent oxidoreductase K15736 - - 0.00000000000006627 71.0
DYD2_k127_2279529_0 COGs COG2208 Serine phosphatase RsbU regulator of sigma subunit - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000008996 285.0
DYD2_k127_2281218_0 2-oxoglutarate dehydrogenase, E1 K00164 - 1.2.4.2 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004107 494.0
DYD2_k127_2281218_1 PAS domain - - - 0.0000000000000000000000000000000000000000001311 176.0
DYD2_k127_2281538_0 Belongs to the ompA family - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002394 354.0
DYD2_k127_2281538_1 Belongs to the ompA family - - - 0.0000000000000000000000000000000000000000000000000005083 192.0
DYD2_k127_2281538_2 Belongs to the pseudouridine synthase RsuA family K06178 - 5.4.99.22 0.00000000000000000000001439 100.0
DYD2_k127_2283649_0 MacB-like periplasmic core domain K02004 - - 8.752e-194 613.0
DYD2_k127_2283649_1 Domain of unknown function (DUF4287) - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001156 301.0
DYD2_k127_2283649_2 HlyD membrane-fusion protein of T1SS - - - 0.000000000000000000000000000000000000000000000000000000000000000011 228.0
DYD2_k127_2283649_3 Protein of unknown function (DUF1761) - - - 0.0000000000000000000000000000000000000000000002754 170.0
DYD2_k127_2283649_4 helix_turn_helix, arabinose operon control protein - - - 0.00000000000000000000000006439 111.0
DYD2_k127_2284199_0 Participates in both transcription termination and antitermination K02600 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004558 594.0
DYD2_k127_2284199_1 Required for maturation of 30S ribosomal subunits K09748 GO:0000028,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006412,GO:0006518,GO:0006807,GO:0006996,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0016043,GO:0019538,GO:0022607,GO:0022613,GO:0022618,GO:0034622,GO:0034641,GO:0034645,GO:0042254,GO:0042255,GO:0042274,GO:0043043,GO:0043170,GO:0043603,GO:0043604,GO:0043933,GO:0044085,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044424,GO:0044444,GO:0044464,GO:0065003,GO:0070925,GO:0071704,GO:0071826,GO:0071840,GO:1901564,GO:1901566,GO:1901576 - 0.00000000021 63.0
DYD2_k127_230920_0 Protein of unknown function (DUF3494) - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007207 351.0
DYD2_k127_230920_1 - - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000008838 288.0
DYD2_k127_2309768_0 RmuC family K09760 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000001335 265.0
DYD2_k127_2309768_1 - - - - 0.00000000000000000000001338 111.0
DYD2_k127_2309768_2 COGs COG2208 Serine phosphatase RsbU regulator of sigma subunit - - - 0.000000003939 58.0
DYD2_k127_2318231_0 PFAM TonB-dependent Receptor K16091 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003582 572.0
DYD2_k127_2329835_0 PFAM TonB-dependent Receptor Plug Domain K02014 - - 1.123e-266 835.0
DYD2_k127_2329835_1 - - - - 0.0000000000000000000000000000000000000000000000000000003646 199.0
DYD2_k127_2331523_0 long-chain fatty acid transport protein - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000001856 281.0
DYD2_k127_2331523_1 Calcineurin-like phosphoesterase superfamily domain K07098 - - 0.000000000000000000000000000000000000000000000000000000000004089 208.0
DYD2_k127_2334282_0 Carbon-nitrogen hydrolase K03820 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008519 595.0
DYD2_k127_2334282_1 Inositol monophosphatase K01092 - 3.1.3.25 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009831 351.0
DYD2_k127_2334282_2 Catalyzes the 2'-O-methylation of the ribose of cytidine 1402 (C1402) in 16S rRNA K07056 - 2.1.1.198 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005612 339.0
DYD2_k127_2334282_3 Redoxin - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000002218 265.0
DYD2_k127_2334282_4 PFAM Helicase conserved C-terminal domain K08282 - 2.7.11.1 0.00000000000000000000000001163 109.0
DYD2_k127_2337626_0 Tetratricopeptide repeat - - - 0.000000000000000000000000000000000000000000000000000000003427 203.0
DYD2_k127_2339031_0 PFAM coproporphyrinogen III oxidase K00228 - 1.3.3.3 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001079 469.0
DYD2_k127_2339031_1 Transketolase, pyrimidine binding domain K11381 - 1.2.4.4 0.00000000000000000000000000000000003473 138.0
DYD2_k127_2339031_2 PFAM PAP2 superfamily K19302 - 3.6.1.27 0.00000006263 54.0
DYD2_k127_2342929_0 PFAM Transglycosylase SLT domain K08307 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000003574 314.0
DYD2_k127_2342929_1 cheY-homologous receiver domain - - - 0.0000000000000000002075 88.0
DYD2_k127_2349784_0 ABC-type antimicrobial peptide transport system, permease component K02004 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008712 454.0
DYD2_k127_2352035_0 Catalyzes the reversible interconversion of serine and glycine with tetrahydrofolate (THF) serving as the one-carbon carrier. This reaction serves as the major source of one-carbon groups required for the biosynthesis of purines, thymidylate, methionine, and other important biomolecules. Also exhibits THF- independent aldolase activity toward beta-hydroxyamino acids, producing glycine and aldehydes, via a retro-aldol mechanism K00600 - 2.1.2.1 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007229 456.0
DYD2_k127_2352035_1 His Kinase A (phosphoacceptor) domain - - - 0.00000000000000000003489 94.0
DYD2_k127_2370697_0 Belongs to the lyase 1 family. Adenylosuccinate lyase subfamily K01756 - 4.3.2.2 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005387 447.0
DYD2_k127_2370725_0 Peptidase family M1 domain - - - 4.039e-198 637.0
DYD2_k127_2371410_0 D,D-heptose 1,7-bisphosphate phosphatase K03273 - 3.1.3.82,3.1.3.83 0.00000000000000000000000000000000000000000000000000000000001606 210.0
DYD2_k127_2371410_1 LytTr DNA-binding domain - - - 0.000000000000000000000001214 111.0
DYD2_k127_2371410_2 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase - - - 0.0000000000000001567 82.0
DYD2_k127_2371410_3 helix_turn_helix, Lux Regulon - - - 0.00000005056 62.0
DYD2_k127_2371731_0 PFAM Helicase conserved C-terminal domain K08282 - 2.7.11.1 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003024 546.0
DYD2_k127_2388995_0 Quinol cytochrome c oxidoreductase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003539 492.0
DYD2_k127_2388995_1 PFAM Cytochrome C - - - 0.000000000000000000000000000000000000000000000000000000000000000000008919 237.0
DYD2_k127_2392421_0 PFAM Peptidase family S41 - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002574 333.0
DYD2_k127_2392421_1 - - - - 0.0000000000000000004925 93.0
DYD2_k127_2398278_0 Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family K03296,K18138 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001664 507.0
DYD2_k127_2398278_1 outer membrane efflux protein K12340 - - 0.00007403 48.0
DYD2_k127_2422290_0 PFAM TonB-dependent Receptor - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008534 367.0
DYD2_k127_2441344_0 Belongs to the ParB family K03497 - - 0.00000000000000000000000000000000000000000000000000000000003011 208.0
DYD2_k127_2441344_1 - - - - 0.000000000000000000000000000000000000005488 153.0
DYD2_k127_2442193_0 PAS fold - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001898 362.0
DYD2_k127_2443153_0 Belongs to the ribF family K11753 - 2.7.1.26,2.7.7.2 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002165 417.0
DYD2_k127_2443153_1 Responsible for synthesis of pseudouridine from uracil- 55 in the psi GC loop of transfer RNAs K03177 GO:0001522,GO:0003674,GO:0003824,GO:0006139,GO:0006396,GO:0006399,GO:0006400,GO:0006725,GO:0006807,GO:0008033,GO:0008150,GO:0008152,GO:0009451,GO:0009982,GO:0009987,GO:0010467,GO:0016070,GO:0016071,GO:0016556,GO:0016853,GO:0016866,GO:0034470,GO:0034641,GO:0034660,GO:0043170,GO:0043412,GO:0044237,GO:0044238,GO:0046483,GO:0071704,GO:0090304,GO:1901360,GO:1990481 5.4.99.25 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000001227 298.0
DYD2_k127_2443153_2 3-oxoacid CoA-transferase, a subunit K01027,K01028,K01031,K01034 - 2.8.3.5,2.8.3.6,2.8.3.8,2.8.3.9 0.00000000000000000000000000000000000000000000000000000000000000000000001303 242.0
DYD2_k127_2443153_3 Catalyzes the dephosphorylation of undecaprenyl diphosphate (UPP). Confers resistance to bacitracin K06153 - 3.6.1.27 0.0000000000000000000000000000000000000000000000000000000001165 207.0
DYD2_k127_2454930_0 The UvrABC repair system catalyzes the recognition and processing of DNA lesions. UvrA is an ATPase and a DNA-binding protein. A damage recognition complex composed of 2 UvrA and 2 UvrB subunits scans DNA for abnormalities. When the presence of a lesion has been verified by UvrB, the UvrA molecules dissociate K03701 - - 0.0 1140.0
DYD2_k127_2461554_0 Belongs to the aspartokinase family K00928 - 2.7.2.4 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002439 521.0
DYD2_k127_2461554_1 Citrate transporter - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001615 419.0
DYD2_k127_2469522_0 - - - - 0.00000000000000000000000000000000000000000000000000000000000008453 227.0
DYD2_k127_2477112_0 Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family - - - 2.796e-195 619.0
DYD2_k127_2477112_1 Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family K03585 - - 0.0000000000005512 72.0
DYD2_k127_2484101_0 Involved in DNA repair and RecF pathway recombination K03584 - - 0.0000000000000000000000000000000000000000000000000000000002183 211.0
DYD2_k127_2484101_1 dehydrogenase complex catalyzes the overall conversion of - - - 0.0000000000000000000000000000000000000000001364 161.0
DYD2_k127_2484101_2 Two component regulator propeller - - - 0.00000000000000000000001104 101.0
DYD2_k127_2485901_0 Mitochondrial biogenesis AIM24 - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000587 412.0
DYD2_k127_2485901_1 PAS fold - - - 0.0000000000000000000000000000000000000000000004495 170.0
DYD2_k127_2485901_2 cheY-homologous receiver domain - - - 0.0000000000000000000125 96.0
DYD2_k127_2490289_0 Histidine ammonia-lyase K01745 - 4.3.1.3 2.05e-221 695.0
DYD2_k127_249073_0 Domain present in phytochromes and cGMP-specific phosphodiesterases. - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003031 344.0
DYD2_k127_249073_1 TrkA-N domain - - - 0.00000000000000000000000000000000002586 138.0
DYD2_k127_249602_0 Belongs to the Glu Leu Phe Val dehydrogenases family K00263 - 1.4.1.9 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000002263 298.0
DYD2_k127_249602_1 Involved in transcription antitermination. Required for transcription of ribosomal RNA (rRNA) genes. Binds specifically to the boxA antiterminator sequence of the ribosomal RNA (rrn) operons K03625 - - 0.00000000000000000000000000000000000000000000002438 175.0
DYD2_k127_249602_2 Involved in transcription antitermination. Required for transcription of ribosomal RNA (rRNA) genes. Binds specifically to the boxA antiterminator sequence of the ribosomal RNA (rrn) operons K03625 - - 0.000000000000000000002186 100.0
DYD2_k127_250915_0 Releases the supercoiling and torsional tension of DNA, which is introduced during the DNA replication and transcription, by transiently cleaving and rejoining one strand of the DNA duplex. Introduces a single-strand break via transesterification at a target site in duplex DNA. The scissile phosphodiester is attacked by the catalytic tyrosine of the enzyme, resulting in the formation of a DNA-(5'-phosphotyrosyl)-enzyme intermediate and the expulsion of a 3'-OH DNA strand. The free DNA strand then undergoes passage around the unbroken strand, thus removing DNA supercoils. Finally, in the religation step, the DNA 3'-OH attacks the covalent intermediate to expel the active-site tyrosine and restore the DNA phosphodiester backbone K03168 - 5.99.1.2 3.564e-311 968.0
DYD2_k127_2512549_0 Amidohydrolase K03392 - 4.1.1.45 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003491 563.0
DYD2_k127_2512549_1 Peptidase S8 and S53 subtilisin kexin sedolisin - - - 0.0000000000000000000000000000000001323 139.0
DYD2_k127_2512549_2 Could be involved in insertion of integral membrane proteins into the membrane K08998 - - 0.000000000000000000000000000002771 121.0
DYD2_k127_2512549_3 Catalyzes the oxidation of either pyridoxine 5'- phosphate (PNP) or pyridoxamine 5'-phosphate (PMP) into pyridoxal 5'-phosphate (PLP) K00275 - 1.4.3.5 0.00000000000000000003462 89.0
DYD2_k127_2512688_0 Protein of unknown function (DUF1015) - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006334 488.0
DYD2_k127_2512688_1 PFAM Carbamoyl-phosphate synthase L chain, ATP binding K01961,K01965 - 6.3.4.14,6.4.1.2,6.4.1.3 0.0000000008855 61.0
DYD2_k127_2514931_0 PFAM GH3 auxin-responsive promoter - - - 1.538e-202 637.0
DYD2_k127_2514931_1 ABC transporter K06861 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005409 423.0
DYD2_k127_2514931_2 single-stranded-DNA-specific exonuclease RecJ K07462 - - 0.0000000000000000000000000007977 115.0
DYD2_k127_2529353_0 Involved in the tonB-independent uptake of proteins - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001458 379.0
DYD2_k127_2530554_0 Belongs to the GARS family K01945 - 6.3.4.13 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007215 557.0
DYD2_k127_2530554_1 ATP-dependent DNA helicase RecQ K03654 - 3.6.4.12 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001127 355.0
DYD2_k127_2530554_2 PFAM PSP1 C-terminal conserved region - - - 0.0000000001177 62.0
DYD2_k127_2537796_0 CarboxypepD_reg-like domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005536 442.0
DYD2_k127_253830_0 The pyruvate dehydrogenase complex catalyzes the overall conversion of pyruvate to acetyl-CoA and CO(2) K00627 - 2.3.1.12 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002712 403.0
DYD2_k127_253830_1 Protease subunit of a proteasome-like degradation complex believed to be a general protein degrading machinery K01419 - 3.4.25.2 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000004965 293.0
DYD2_k127_2540392_0 NADP oxidoreductase coenzyme F420-dependent - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009686 320.0
DYD2_k127_2540392_1 PFAM Cytochrome c assembly protein K02198 - - 0.0000000000000000000000000000000000000000000000000000000000000000000001186 247.0
DYD2_k127_2540392_2 PFAM UbiA prenyltransferase K03179 - 2.5.1.39 0.0000000000000000000007656 96.0
DYD2_k127_2542050_0 long-chain fatty acid transport protein - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001676 458.0
DYD2_k127_2542050_1 Peptidase family C25 - - - 0.000001289 51.0
DYD2_k127_2542222_0 Participates in chromosomal partition during cell division. May act via the formation of a condensin-like complex containing Smc and ScpA that pull DNA away from mid-cell into both cell halves K06024 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000003754 282.0
DYD2_k127_2542222_1 Belongs to the pseudouridine synthase RsuA family K06178 - 5.4.99.22 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000008003 291.0
DYD2_k127_2542222_2 PFAM Prokaryotic dksA traR C4-type zinc finger - - - 0.00000000000000000000000000000000000000000000000000005207 189.0
DYD2_k127_2542222_3 Catalyzes the prenylation of para-hydroxybenzoate (PHB) with an all-trans polyprenyl group. Mediates the second step in the final reaction sequence of ubiquinone-8 (UQ-8) biosynthesis, which is the condensation of the polyisoprenoid side chain with PHB, generating the first membrane-bound Q intermediate 3- octaprenyl-4-hydroxybenzoate - - - 0.0000000000000000000000000000002145 134.0
DYD2_k127_254337_0 Glycosyl hydrolase family 3 N terminal domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006456 467.0
DYD2_k127_254337_1 - - - - 0.0000000000000000000002033 100.0
DYD2_k127_2545549_0 zinc metalloprotease K11749 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003434 556.0
DYD2_k127_2545549_1 Phosphate acyltransferases - - - 0.0000000000000000000000000000000000000000000000000000000000000000000007874 252.0
DYD2_k127_2545549_2 Site-specific recombinase - - - 0.0000000000000000000000000000000000000005809 152.0
DYD2_k127_2555915_0 Endonuclease exonuclease phosphatase family - - - 0.000000000000000000000000000000000000000000000000000000000000000000000001505 255.0
DYD2_k127_2555915_1 TIGRFAM Gliding motility-associated protein, GldC - - - 0.000002602 49.0
DYD2_k127_2557660_0 Alpha-2-Macroglobulin K06894 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005776 485.0
DYD2_k127_2564908_0 TonB-dependent receptor plug - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000102 457.0
DYD2_k127_2573102_0 Catalyzes the NADPH-dependent reduction of ketopantoate into pantoic acid K00077 - 1.1.1.169 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003844 413.0
DYD2_k127_2573102_1 aminotransferase class I and II - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000005172 283.0
DYD2_k127_2573102_2 mannose-6-phosphate isomerase - - - 0.000000000000000000000000000000000000000000000000000001256 193.0
DYD2_k127_2573102_3 Protein of unknown function (DUF3037) - - - 0.000000000000000000000000000000003338 133.0
DYD2_k127_2587075_0 FAD dependent oxidoreductase K07137 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009653 525.0
DYD2_k127_2590866_0 His Kinase A (phosphoacceptor) domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002227 555.0
DYD2_k127_2592645_0 Belongs to the pseudouridine synthase RsuA family K06182,K06183 GO:0000154,GO:0000455,GO:0001522,GO:0003674,GO:0003824,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006139,GO:0006364,GO:0006396,GO:0006399,GO:0006400,GO:0006725,GO:0006807,GO:0008033,GO:0008150,GO:0008152,GO:0009451,GO:0009982,GO:0009987,GO:0010467,GO:0016070,GO:0016072,GO:0016853,GO:0016866,GO:0022613,GO:0031118,GO:0031119,GO:0034470,GO:0034641,GO:0034660,GO:0042254,GO:0043170,GO:0043412,GO:0044085,GO:0044237,GO:0044238,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0071704,GO:0071840,GO:0090304,GO:1901360 5.4.99.19,5.4.99.21 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004057 355.0
DYD2_k127_2592645_1 Domain present in phytochromes and cGMP-specific phosphodiesterases. K03406 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002777 326.0
DYD2_k127_2592963_0 Transfers an acetyl group from acetyl-CoA to L- homoserine, forming acetyl-L-homoserine K00641 - 2.3.1.31 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001011 409.0
DYD2_k127_2592963_1 PFAM Cys Met metabolism PLP-dependent enzyme K01740 - 2.5.1.49 0.0000000000000000001673 88.0
DYD2_k127_2607700_0 TIGRFAM Acidobacterial duplicated orphan permease K02004 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003738 355.0
DYD2_k127_2607700_1 ABC transporter K02003 - - 0.0000000000000000000000000000000000000000000000000000000000000001292 222.0
DYD2_k127_2632907_0 Alanine dehydrogenase PNT, N-terminal domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003789 557.0
DYD2_k127_2632907_1 transcriptional regulator K07665 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000857 274.0
DYD2_k127_2632907_2 PFAM Major Facilitator Superfamily - - - 0.000000000000000000000000000000000002555 139.0
DYD2_k127_2633278_0 Belongs to the phosphoglycerate kinase family K00927 - 2.7.2.3 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000265 530.0
DYD2_k127_2633278_1 cytidine and deoxycytidylate deaminase K01489 - 3.5.4.5 0.000000000000000000000000000000000000000003053 160.0
DYD2_k127_26362_0 Belongs to the DEAD box helicase family - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008676 499.0
DYD2_k127_26362_1 translation initiation factor activity K12573 - - 0.0000000000000000000000000000000000000000000000000000000000002227 224.0
DYD2_k127_2640208_0 dihydrolipoamide dehydrogenase K00382 - 1.8.1.4 4.799e-242 753.0
DYD2_k127_2654303_0 - - - - 0.0000000000000000000000000000000000000000000000000000000000000001975 226.0
DYD2_k127_2654303_1 Couples transcription and DNA repair by recognizing RNA polymerase (RNAP) stalled at DNA lesions. Mediates ATP-dependent release of RNAP and its truncated transcript from the DNA, and recruitment of nucleotide excision repair machinery to the damaged site K03723 - - 0.0000000000000000000000000000000002953 135.0
DYD2_k127_2654303_2 PhoQ Sensor - - - 0.000000000002803 71.0
DYD2_k127_265711_0 PFAM Peptidase family M20 M25 M40 - - - 3.692e-238 743.0
DYD2_k127_265711_1 - - - - 0.000000000000000000000000000000000000000000000000000000000000000007057 234.0
DYD2_k127_2660552_0 acyl-CoA oxidase K00232 - 1.3.3.6 5.318e-248 772.0
DYD2_k127_2660552_1 UPF0126 domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000005438 289.0
DYD2_k127_2660552_2 Cold shock protein domain - - - 0.0000000000000000000000000000000000000000000000000000000006451 204.0
DYD2_k127_2660552_3 SdpI/YhfL protein family - - - 0.0000000000008216 73.0
DYD2_k127_2663152_0 Glycosyl transferase family 2 - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002134 405.0
DYD2_k127_2663152_1 May be involved in recombinational repair of damaged DNA K03631 - - 0.00000000000000000000000000000000000000000000000000000000000000000006123 233.0
DYD2_k127_2663152_2 COG1807 4-amino-4-deoxy-L-arabinose transferase and related - - - 0.00000000000000000000000000000000000000000000000000001011 190.0
DYD2_k127_2667750_0 Aldo/keto reductase family K19265 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002296 466.0
DYD2_k127_2667750_1 PFAM ABC transporter - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002052 332.0
DYD2_k127_2667750_2 Bacterial regulatory proteins, tetR family - - - 0.000000000000000000000000000000000000000000000000000000000000000000000001145 252.0
DYD2_k127_2670649_0 Glucose / Sorbosone dehydrogenase - - - 0.0000000000000000000000009914 119.0
DYD2_k127_2670921_0 Beta-lactamase superfamily domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006122 396.0
DYD2_k127_2670921_1 protein conserved in bacteria (DUF2200) - - - 0.000000000000000000000000000000000000000000000000000000000000005455 217.0
DYD2_k127_2670921_2 Domain of unknown function (DU1801) - - - 0.00000000000000000000000000000000000000000000001932 171.0
DYD2_k127_2673136_0 Glycine D-amino acid oxidase (deaminating) - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008479 421.0
DYD2_k127_2679068_0 that it carries out the mismatch recognition step. This protein has a weak ATPase activity K03555 GO:0003674,GO:0003676,GO:0003677,GO:0003684,GO:0003690,GO:0003824,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0006139,GO:0006259,GO:0006281,GO:0006298,GO:0006725,GO:0006807,GO:0006950,GO:0006974,GO:0008094,GO:0008150,GO:0008152,GO:0009987,GO:0016462,GO:0016787,GO:0016817,GO:0016818,GO:0016887,GO:0017111,GO:0030983,GO:0032300,GO:0032991,GO:0033554,GO:0034641,GO:0042623,GO:0043170,GO:0044237,GO:0044238,GO:0044260,GO:0044424,GO:0044464,GO:0046483,GO:0050896,GO:0051716,GO:0071704,GO:0090304,GO:0097159,GO:1901360,GO:1901363,GO:1990391 - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000005981 277.0
DYD2_k127_2679918_0 7TM diverse intracellular signalling - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001332 467.0
DYD2_k127_2686199_0 amino acids such as valine, to avoid such errors it has two additional distinct tRNA(Ile)-dependent editing activities. One activity is designated as 'pretransfer' editing and involves the hydrolysis of activated Val-AMP. The other activity is designated 'posttransfer' editing and involves deacylation of mischarged Val-tRNA(Ile) K01870 GO:0003674,GO:0003824,GO:0004812,GO:0004822,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006082,GO:0006139,GO:0006399,GO:0006412,GO:0006418,GO:0006428,GO:0006518,GO:0006520,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0016070,GO:0016874,GO:0016875,GO:0019538,GO:0019752,GO:0034641,GO:0034645,GO:0034660,GO:0043038,GO:0043039,GO:0043043,GO:0043170,GO:0043436,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044281,GO:0044424,GO:0044464,GO:0046483,GO:0071704,GO:0090304,GO:0140098,GO:0140101,GO:1901360,GO:1901564,GO:1901566,GO:1901576 6.1.1.5 1.565e-228 713.0
DYD2_k127_2690584_0 Lipid A 3-O-deacylase (PagL) - - - 0.00000000000000000000000000000000000000000000000006364 190.0
DYD2_k127_2698266_0 permease K02004 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001901 443.0
DYD2_k127_2698307_0 AsmA-like C-terminal region - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001861 341.0
DYD2_k127_2703207_0 pfam nudix - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000002674 271.0
DYD2_k127_2703207_1 Endonuclease that specifically degrades the RNA of RNA- DNA hybrids K03470 - 3.1.26.4 0.00000000000000000000000000000000000000000000000000000000000000000000006506 248.0
DYD2_k127_2703207_2 efflux protein, MATE family K03327 - - 0.00000000000000000000000000000000000000000000000000001073 194.0
DYD2_k127_2703337_0 PFAM Na dependent nucleoside transporter K03317 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009998 582.0
DYD2_k127_2703337_1 fatty acid desaturase K00507 - 1.14.19.1 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002838 413.0
DYD2_k127_2703337_2 Sigma-70 region 2 - - - 0.000000000000000000000000000000000000000000000000000000175 200.0
DYD2_k127_2704104_0 Attaches a formyl group to the free amino group of methionyl-tRNA(fMet). The formyl group appears to play a dual role in the initiator identity of N-formylmethionyl-tRNA by promoting its recognition by IF2 and preventing the misappropriation of this tRNA by the elongation apparatus K00604 GO:0003674,GO:0003824,GO:0004479,GO:0006139,GO:0006396,GO:0006399,GO:0006400,GO:0006412,GO:0006413,GO:0006464,GO:0006518,GO:0006725,GO:0006807,GO:0008033,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009451,GO:0009987,GO:0010467,GO:0016070,GO:0016740,GO:0016741,GO:0016742,GO:0019538,GO:0019988,GO:0034470,GO:0034641,GO:0034645,GO:0034660,GO:0036211,GO:0043043,GO:0043170,GO:0043412,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0046483,GO:0071704,GO:0071951,GO:0090304,GO:0140098,GO:0140101,GO:1901360,GO:1901564,GO:1901566,GO:1901576 2.1.2.9 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003922 448.0
DYD2_k127_2704104_1 PFAM Uncharacterised conserved protein UCP016719 - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003032 346.0
DYD2_k127_2709885_0 Catalyzes the interconversion of 2-phosphoglycerate and 3-phosphoglycerate K15633 - 5.4.2.12 4.786e-203 637.0
DYD2_k127_2731898_0 Inner membrane protein CreD K06143 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001333 395.0
DYD2_k127_2731898_1 transcriptional regulator - - - 0.000000291 52.0
DYD2_k127_2736924_0 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000001536 281.0
DYD2_k127_2736924_1 glycosylase K03575 - - 0.0000000000000000000008075 94.0
DYD2_k127_2742294_0 peptidase M1 K01256 - 3.4.11.2 0.0000000000000000000000000000005957 137.0
DYD2_k127_2749179_0 PFAM Glycosyl transferase family 2 - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000008065 276.0
DYD2_k127_2749179_1 Lysylphosphatidylglycerol synthase TM region K07027 - - 0.0000000000000000000000000000000000000000000000000008807 192.0
DYD2_k127_2749179_2 - - - - 0.000000000000000000002888 96.0
DYD2_k127_2758867_0 Dihydrolipoyl dehydrogenase K00382 - 1.8.1.4 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001682 605.0
DYD2_k127_2765372_0 Mechanosensitive ion channel - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002593 585.0
DYD2_k127_2769071_0 PFAM Transglycosylase SLT domain K08307 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001053 324.0
DYD2_k127_2769071_1 Allows the formation of correctly charged Gln-tRNA(Gln) through the transamidation of misacylated Glu-tRNA(Gln) in organisms which lack glutaminyl-tRNA synthetase. The reaction takes place in the presence of glutamine and ATP through an activated gamma-phospho-Glu-tRNA(Gln) K02433 - 6.3.5.6,6.3.5.7 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005954 308.0
DYD2_k127_2787969_0 Belongs to the peptidase S41A family K03797 - 3.4.21.102 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007224 361.0
DYD2_k127_2788962_0 luciferase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001345 389.0
DYD2_k127_2808370_0 damaged site, the DNA wraps around one UvrB monomer. DNA wrap is dependent on ATP binding by UvrB and probably causes local melting of the DNA helix, facilitating insertion of UvrB beta-hairpin between the DNA strands. Then UvrB probes one DNA strand for the presence of a lesion. If a lesion is found the UvrA subunits dissociate and the UvrB-DNA preincision complex is formed. This complex is subsequently bound by UvrC and the second UvrB is released. If no lesion is found, the DNA wraps around the other UvrB subunit that will check the other stand for damage K03702 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003061 457.0
DYD2_k127_2808370_1 Beta-lactamase K01286 - 3.4.16.4 0.00000000000000000000000000000000000000000000000000000000000000002741 229.0
DYD2_k127_2814697_0 Pfam Activator of Hsp90 ATPase homolog 1-like protein - - - 0.0000000000000000000000000000000000000000006158 160.0
DYD2_k127_2814697_1 PAS fold - - - 0.00000000000000000000000000001371 121.0
DYD2_k127_2817166_0 TIGRFAM FeS assembly ATPase SufC K09013 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004192 444.0
DYD2_k127_2817166_1 TIGRFAM FeS assembly protein SufB K09014 - - 0.000000000000000000000000000000000002706 137.0
DYD2_k127_2817166_2 Uncharacterized protein family (UPF0051) K09015 - - 0.00004522 49.0
DYD2_k127_281971_0 Belongs to the glycosyl hydrolase 31 family K01187 - 3.2.1.20 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002183 593.0
DYD2_k127_282314_0 Belongs to the sigma-70 factor family. ECF subfamily K03088 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002495 324.0
DYD2_k127_282314_1 DNA repair enzyme that has both DNA N-glycosylase activity and AP-lyase activity. The DNA N-glycosylase activity releases various damaged pyrimidines from DNA by cleaving the N- glycosidic bond, leaving an AP (apurinic apyrimidinic) site. The AP-lyase activity cleaves the phosphodiester bond 3' to the AP site by a beta-elimination, leaving a 3'-terminal unsaturated sugar and a product with a terminal 5'-phosphate K10773 - 4.2.99.18 0.000000000000000000000000000000000000000001127 157.0
DYD2_k127_2827490_0 Caspase domain - - - 0.000000000000000000000000000000000000000000000000000000000000001594 223.0
DYD2_k127_2827490_1 Caspase domain - - - 0.000000000000000000000000000000000000000000000000000000000000005898 244.0
DYD2_k127_2827490_2 WD domain, G-beta repeat - - - 0.0000000008907 63.0
DYD2_k127_2832383_0 PFAM MCP methyltransferase CheR-type K00575 - 2.1.1.80 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004702 486.0
DYD2_k127_2832383_1 CheB methylesterase K03412 - 3.1.1.61,3.5.1.44 0.00000000000000000000000000003328 117.0
DYD2_k127_2832383_2 cytidine and deoxycytidylate deaminase K01489 - 3.5.4.5 0.000000000000001142 78.0
DYD2_k127_2835712_0 Belongs to the SEDS family K03588 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000001041 295.0
DYD2_k127_2835712_1 Cell wall formation. Catalyzes the addition of glutamate to the nucleotide precursor UDP-N-acetylmuramoyl-L-alanine (UMA) K01925 - 6.3.2.9 0.00000000000000000000000000000000000000000000000000000000000000000000008598 244.0
DYD2_k127_2845085_0 COGs COG2885 Outer membrane protein and related peptidoglycan-associated (lipo)protein K03640 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000004589 268.0
DYD2_k127_2849620_0 RNA polymerase, sigma-54 factor K03092 - - 6.946e-221 693.0
DYD2_k127_2849620_1 Asparaginyl-tRNA synthetase K01893 - 6.1.1.22 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002572 424.0
DYD2_k127_285048_0 sigma54 specific, transcriptional regulator, Fis family - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008322 521.0
DYD2_k127_285048_1 Catalyzes the methylthiolation of N6- (dimethylallyl)adenosine (i(6)A), leading to the formation of 2- methylthio-N6-(dimethylallyl)adenosine (ms(2)i(6)A) at position 37 in tRNAs that read codons beginning with uridine K06168 - 2.8.4.3 0.000000000118 62.0
DYD2_k127_2855179_0 Penicillin-binding protein, dimerisation domain K05515 - 3.4.16.4 0.00000000000000000000000000000000000000000000000000000000000000000000000002315 256.0
DYD2_k127_2855179_1 Involved in formation and maintenance of cell shape K03570 - - 0.00000000000000000000000000000000000000000000000000000000000239 215.0
DYD2_k127_2855179_2 rod shape-determining protein MreD - - - 0.000000000000000000000000000000000000000000006226 168.0
DYD2_k127_2855952_0 PFAM Peptidase family M23 - - - 0.000000000000000000000000000000000000000000000000000001381 193.0
DYD2_k127_2855952_1 helix_turn_helix, mercury resistance - - - 0.000000000000000000000000000000000000000000000002069 175.0
DYD2_k127_2855952_2 TIGRFAM DNA protecting protein DprA K04096 - - 0.00000000000000000000000005608 110.0
DYD2_k127_2858785_0 Catalyzes the formation of L-homocysteine from O- succinyl-L-homoserine (OSHS) and hydrogen sulfide K10764 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004768 459.0
DYD2_k127_2858785_1 OmpA family - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001054 327.0
DYD2_k127_2860608_0 YHYH protein - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000002731 291.0
DYD2_k127_2866569_0 GHKL domain - - - 0.00000000000000000000000000000000000000000007516 171.0
DYD2_k127_2867020_0 TIGRFAM DNA protecting protein DprA K04096 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002908 306.0
DYD2_k127_2867020_1 Peptidyl-prolyl cis-trans isomerase K01802,K03767 - 5.2.1.8 0.000000000000000000000000000000001289 136.0
DYD2_k127_2867145_0 Cell wall formation. Adds enolpyruvyl to UDP-N- acetylglucosamine K00790 - 2.5.1.7 1.385e-235 733.0
DYD2_k127_2867145_1 Domain of unknown function (DUF4290) - - - 0.000000000000000000000000000000000000000000000000000002899 197.0
DYD2_k127_2868570_0 it is required for DNA replication and normal SOS inducibility. RecF binds preferentially to single-stranded, linear DNA. It also seems to bind ATP K03629 GO:0000731,GO:0006139,GO:0006259,GO:0006281,GO:0006302,GO:0006725,GO:0006807,GO:0006950,GO:0006974,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0018130,GO:0019438,GO:0033554,GO:0034641,GO:0034645,GO:0034654,GO:0043170,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044271,GO:0046483,GO:0050896,GO:0051716,GO:0071704,GO:0071897,GO:0090304,GO:1901360,GO:1901362,GO:1901576 - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003942 400.0
DYD2_k127_2868570_1 The pyruvate dehydrogenase complex catalyzes the overall conversion of pyruvate to acetyl-CoA and CO(2) K00161 - 1.2.4.1 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000001505 282.0
DYD2_k127_2868570_2 Protein of unknown function (DUF721) - - - 0.000000000000000000004757 95.0
DYD2_k127_2875083_0 - - - - 1.896e-301 950.0
DYD2_k127_28805_0 Involved in the biosynthesis of the osmoprotectant glycine betaine. Catalyzes the oxidation of choline to betaine aldehyde and betaine aldehyde to glycine betaine at the same rate K00108 - 1.1.99.1 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006287 460.0
DYD2_k127_28805_1 Putative auto-transporter adhesin, head GIN domain - - - 0.0000000000000000000000000000000000000003792 158.0
DYD2_k127_2880685_0 Belongs to the PdxA family K00097 - 1.1.1.262 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002297 459.0
DYD2_k127_2880685_1 Presumably involved in the processing and regular turnover of intracellular proteins. Catalyzes the removal of unsubstituted N-terminal amino acids from various peptides K01255 - 3.4.11.1 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001499 355.0
DYD2_k127_2880685_2 Uncharacterized ACR, COG1399 - - - 0.0000000000000000000000000000000000000000005019 163.0
DYD2_k127_2882039_0 Tricorn protease homolog - - - 0.0 1403.0
DYD2_k127_2886204_0 TIGRFAM Na H antiporter NhaC K03315 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008056 575.0
DYD2_k127_2886204_1 Glycine D-amino acid oxidase (deaminating) - - - 0.00000000000000000000000007925 108.0
DYD2_k127_2891817_0 Belongs to the thiolase family K00626,K07823 - 2.3.1.174,2.3.1.9 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002229 312.0
DYD2_k127_2891817_1 Belongs to the thiolase family K00626,K07823 - 2.3.1.174,2.3.1.9 0.00000000000000000000000000000000000000000000000000000001878 198.0
DYD2_k127_2891817_2 Formation of pseudouridine at positions 38, 39 and 40 in the anticodon stem and loop of transfer RNAs K06173 GO:0001522,GO:0003674,GO:0003824,GO:0006139,GO:0006396,GO:0006399,GO:0006400,GO:0006725,GO:0006807,GO:0008033,GO:0008150,GO:0008152,GO:0009451,GO:0009982,GO:0009987,GO:0010467,GO:0016070,GO:0016853,GO:0016866,GO:0031119,GO:0034470,GO:0034641,GO:0034660,GO:0043170,GO:0043412,GO:0044237,GO:0044238,GO:0046483,GO:0071704,GO:0090304,GO:1901360 5.4.99.12 0.00000001131 56.0
DYD2_k127_2896344_0 ABC-type multidrug transport system ATPase component K01990 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001842 308.0
DYD2_k127_2896344_1 Psort location CytoplasmicMembrane, score 10.00 - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000004531 290.0
DYD2_k127_2907873_0 PFAM M42 glutamyl aminopeptidase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001621 455.0
DYD2_k127_2907873_1 Catalyzes the formation of S-adenosylmethionine (AdoMet) from methionine and ATP. The overall synthetic reaction is composed of two sequential steps, AdoMet formation and the subsequent tripolyphosphate hydrolysis which occurs prior to release of AdoMet from the enzyme K00789 GO:0003674,GO:0003824,GO:0004478,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0016740,GO:0016765,GO:0044424,GO:0044444,GO:0044464 2.5.1.6 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003281 396.0
DYD2_k127_2907873_2 uracil phosphoribosyltransferase K00761 - 2.4.2.9 0.00000000000000000000000002878 113.0
DYD2_k127_2913344_0 RESPONSE REGULATOR receiver - - - 0.00000000000000000000000000000000000000000000000000000001497 202.0
DYD2_k127_2913344_1 amino acid peptide transporter K03305 - - 0.0000000000000000000000000000000000000000000000001322 179.0
DYD2_k127_2913344_2 Domain of unknown function (DUF1987) - - - 0.0000000000000000000000000000000000000000000000003781 178.0
DYD2_k127_2913344_3 - - - - 0.000000000000000000000000000000000000000000005598 169.0
DYD2_k127_2913344_4 PFAM Signal transduction histidine kinase, internal region - - - 0.00000000000000000004951 91.0
DYD2_k127_2916171_0 PFAM Aminotransferase class-III K01845 - 5.4.3.8 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001073 516.0
DYD2_k127_2916171_1 PFAM Receptor family ligand binding region - - - 0.0000000000009891 71.0
DYD2_k127_2930155_0 Domain of Unknown Function (DUF1080) - - - 0.000000000000000000000000000000000000000000000000000000000000000000002382 240.0
DYD2_k127_2930155_1 PFAM Cytochrome c, class I - - - 0.000000000000000000000000000000000000000000000007818 175.0
DYD2_k127_2931828_0 PFAM amidohydrolase - - - 3.004e-220 692.0
DYD2_k127_2932011_0 RNA-binding PUA-like domain of methyltransferase RsmF - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000002509 284.0
DYD2_k127_2932011_1 Plasmid stabilization system - - - 0.00000000000000000000000000001365 120.0
DYD2_k127_2932011_2 membrane transporter protein K07090 - - 0.000000005438 59.0
DYD2_k127_2934875_0 Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006347 571.0
DYD2_k127_2946407_0 PFAM Pregnancy-associated plasma protein-A - - - 0.00000000000000000000000000000000000001764 159.0
DYD2_k127_2947028_0 Belongs to the type II topoisomerase GyrA ParC subunit family K02621 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000009769 274.0
DYD2_k127_2947028_1 DUF218 domain K03748 - - 0.000000000000000000000000000000000000000000000000000000000000004407 222.0
DYD2_k127_2947028_2 CarboxypepD_reg-like domain - - - 0.00000000000004984 74.0
DYD2_k127_2948405_0 Serine aminopeptidase, S33 - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003209 342.0
DYD2_k127_2948405_1 Catalyzes the complicated ring closure reaction between the two acyclic compounds 1-deoxy-D-xylulose-5-phosphate (DXP) and 3-amino-2-oxopropyl phosphate (1-amino-acetone-3-phosphate or AAP) to form pyridoxine 5'-phosphate (PNP) and inorganic phosphate K03474 GO:0003674,GO:0003824,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006725,GO:0006766,GO:0006767,GO:0006807,GO:0008150,GO:0008152,GO:0008614,GO:0008615,GO:0009058,GO:0009110,GO:0009987,GO:0016740,GO:0016769,GO:0017144,GO:0018130,GO:0019438,GO:0033856,GO:0034641,GO:0042364,GO:0042816,GO:0042819,GO:0044237,GO:0044249,GO:0044271,GO:0044281,GO:0044283,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0051186,GO:0051188,GO:0071704,GO:0072524,GO:0072525,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576,GO:1901615,GO:1901617 2.6.99.2 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000002344 297.0
DYD2_k127_2948550_0 Major facilitator superfamily K08151 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002271 562.0
DYD2_k127_2948550_1 nitroreductase - - - 0.00000000000000000000000000000000000000000000000000000000000000000002378 237.0
DYD2_k127_2948550_2 - - - - 0.0000000001216 64.0
DYD2_k127_2948718_0 Patatin-like phospholipase K07001 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000606 348.0
DYD2_k127_2953434_0 Histidine kinase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000002282 286.0
DYD2_k127_2953434_1 Pfam Plasmid stabilisation system protein - - - 0.0000000000000000009633 89.0
DYD2_k127_2953434_2 Catalyzes the phosphorylation of the position 2 hydroxy group of 4-diphosphocytidyl-2C-methyl-D-erythritol K00919 GO:0003674,GO:0003824,GO:0006793,GO:0006796,GO:0008150,GO:0008152,GO:0009987,GO:0016301,GO:0016310,GO:0016740,GO:0016772,GO:0016773,GO:0044237,GO:0050515 2.7.1.148 0.00004851 46.0
DYD2_k127_2953434_3 - - - - 0.0007961 44.0
DYD2_k127_2960362_0 FUSC-like inner membrane protein yccS - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000003029 304.0
DYD2_k127_2960362_1 Aminotransferase class-V - - - 0.0000000000000000000000000000000000000000000000000000000000000002336 228.0
DYD2_k127_2965987_0 Catalyzes the reductive methylation of 2'-deoxyuridine- 5'-monophosphate (dUMP) to 2'-deoxythymidine-5'-monophosphate (dTMP) while utilizing 5,10-methylenetetrahydrofolate (mTHF) as the methyl donor and reductant in the reaction, yielding dihydrofolate (DHF) as a by-product. This enzymatic reaction provides an intracellular de novo source of dTMP, an essential precursor for DNA biosynthesis K00560 GO:0000287,GO:0003674,GO:0003824,GO:0004799,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006139,GO:0006220,GO:0006221,GO:0006231,GO:0006725,GO:0006753,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0008168,GO:0009058,GO:0009117,GO:0009123,GO:0009124,GO:0009129,GO:0009130,GO:0009157,GO:0009162,GO:0009165,GO:0009176,GO:0009177,GO:0009219,GO:0009221,GO:0009262,GO:0009263,GO:0009265,GO:0009314,GO:0009394,GO:0009628,GO:0009987,GO:0016740,GO:0016741,GO:0018130,GO:0019438,GO:0019637,GO:0019692,GO:0032259,GO:0034641,GO:0034654,GO:0042083,GO:0043167,GO:0043169,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0044424,GO:0044444,GO:0044464,GO:0046073,GO:0046385,GO:0046483,GO:0046872,GO:0050896,GO:0055086,GO:0071704,GO:0072527,GO:0072528,GO:0090407,GO:1901135,GO:1901137,GO:1901293,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576 2.1.1.45 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000001365 275.0
DYD2_k127_2965987_1 aminopeptidase activity - - - 0.00000000000000002174 88.0
DYD2_k127_2971563_0 PFAM Peptidase M1, membrane alanine aminopeptidase K01256 - 3.4.11.2 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002105 571.0
DYD2_k127_3003942_0 NQR complex catalyzes the reduction of ubiquinone-1 to ubiquinol by two successive reactions, coupled with the transport of Na( ) ions from the cytoplasm to the periplasm. The first step is catalyzed by NqrF, which accepts electrons from NADH and reduces ubiquinone-1 to ubisemiquinone by a one-electron transfer pathway K00351 - 1.6.5.8 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005504 472.0
DYD2_k127_3003942_1 PFAM Integral membrane protein TerC - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000004487 263.0
DYD2_k127_300646_0 TIGRFAM FeS assembly protein SufB K09014 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003448 393.0
DYD2_k127_300646_1 Part of the outer membrane protein assembly complex, which is involved in assembly and insertion of beta-barrel proteins into the outer membrane - - - 0.0000000000000000000002557 102.0
DYD2_k127_3015100_0 Subtilase family - - - 1.951e-244 783.0
DYD2_k127_3015100_1 bleomycin resistance protein - - - 0.0000000000000000000000000000000000000000001078 164.0
DYD2_k127_3015100_2 TfoX N-terminal domain - - - 0.00000000000000000000000002658 109.0
DYD2_k127_3027228_0 - - - - 0.00000000000000000000000000000000000000000000000001074 184.0
DYD2_k127_3027228_1 PFAM M42 glutamyl aminopeptidase - - - 0.0000000000000000000000000000000000003436 141.0
DYD2_k127_3034496_0 OsmC-like protein - - - 0.00000000000000000000000000000000000000000000000000001637 191.0
DYD2_k127_3034496_1 - - - - 0.000000000000000006038 85.0
DYD2_k127_3034496_2 COG0720 6-pyruvoyl-tetrahydropterin synthase K01737 - 4.1.2.50,4.2.3.12 0.0000000000000005603 78.0
DYD2_k127_3056902_0 Methylmalonyl-CoA mutase K01847 - 5.4.99.2 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002116 417.0
DYD2_k127_3056902_1 CHAT domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001402 430.0
DYD2_k127_3058376_0 tRNA synthetase class II core domain (G, H, P, S and T) K01875 - 6.1.1.11 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002151 586.0
DYD2_k127_3077798_0 Glycosyltransferase like family 2 - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001394 402.0
DYD2_k127_3077798_1 - - - - 0.00000000000000000000000000000000000000000000000000000000000006898 224.0
DYD2_k127_3089618_0 Cell division protein FtsI penicillin-binding protein 2 K03587 - 3.4.16.4 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001069 481.0
DYD2_k127_3089618_1 - - - - 0.00000000000000000000000000000002076 130.0
DYD2_k127_3089618_2 Specifically methylates the N4 position of cytidine in position 1402 (C1402) of 16S rRNA K03438 GO:0000154,GO:0001510,GO:0003674,GO:0003824,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006139,GO:0006364,GO:0006396,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0008168,GO:0008170,GO:0008173,GO:0008649,GO:0008757,GO:0009451,GO:0009987,GO:0010467,GO:0016070,GO:0016072,GO:0016434,GO:0016740,GO:0016741,GO:0022613,GO:0031167,GO:0032259,GO:0034470,GO:0034641,GO:0034660,GO:0042254,GO:0043170,GO:0043412,GO:0043414,GO:0044085,GO:0044237,GO:0044238,GO:0044260,GO:0044424,GO:0044464,GO:0046483,GO:0070475,GO:0071424,GO:0071704,GO:0071840,GO:0090304,GO:0140098,GO:0140102,GO:1901360 2.1.1.199 0.00000005049 54.0
DYD2_k127_3094383_0 Leucine-rich repeat (LRR) protein - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000001281 274.0
DYD2_k127_3110398_0 response regulator - - - 0.00000000000000000664 86.0
DYD2_k127_3110398_1 Tetratricopeptide repeat - - - 0.000000000000002245 87.0
DYD2_k127_312198_0 Catalyzes two steps in the biosynthesis of coenzyme A. In the first step cysteine is conjugated to 4'-phosphopantothenate to form 4-phosphopantothenoylcysteine, in the latter compound is decarboxylated to form 4'-phosphopantotheine K13038 - 4.1.1.36,6.3.2.5 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001682 524.0
DYD2_k127_312198_1 TIGRFAM Outer membrane assembly lipoprotein YfiO K05807 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000009135 292.0
DYD2_k127_312198_2 Promotes RNA polymerase assembly. Latches the N- and C- terminal regions of the beta' subunit thereby facilitating its interaction with the beta and alpha subunits - - - 0.00000000000000000000000000000000000002442 145.0
DYD2_k127_312198_3 - - - - 0.0000000000000000000000000000000000007217 149.0
DYD2_k127_312198_4 Domain of unknown function (DUF4835) - - - 0.0000000000000002211 82.0
DYD2_k127_3124369_0 Belongs to the peptidase S41A family K03797 - 3.4.21.102 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001757 558.0
DYD2_k127_3124369_1 RNaseP catalyzes the removal of the 5'-leader sequence from pre-tRNA to produce the mature 5'-terminus. It can also cleave other RNA substrates such as 4.5S RNA. The protein component plays an auxiliary but essential role in vivo by binding to the 5'-leader sequence and broadening the substrate specificity of the ribozyme K03536 - 3.1.26.5 0.00000000000000000000000000000004195 129.0
DYD2_k127_3124369_2 Belongs to the bacterial ribosomal protein bL34 family K02914 - - 0.000000000000000004974 84.0
DYD2_k127_312441_0 ATPases associated with a variety of cellular activities K02065 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009009 310.0
DYD2_k127_312441_1 ABC-type transport system involved in resistance to organic solvents periplasmic component K02067 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000005137 263.0
DYD2_k127_312441_2 ABC-type transport system involved in resistance to organic solvents permease component K02066 - - 0.0000000000000000000000000001378 117.0
DYD2_k127_3140645_0 Belongs to the ompA family - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001076 364.0
DYD2_k127_3140645_1 Belongs to the ompA family - - - 0.0000000000000000000000000000001047 126.0
DYD2_k127_3147292_0 PFAM Mechanosensitive ion channel K16052 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006525 549.0
DYD2_k127_3147292_1 Domain of unknown function (DUF4407) - - - 0.000000000000000000000000000000000000000000000000000000008326 203.0
DYD2_k127_3167759_0 Domain present in phytochromes and cGMP-specific phosphodiesterases. - - - 2.507e-205 663.0
DYD2_k127_3169328_0 TIGRFAM GTP cyclohydrolase I K01495 - 3.5.4.16 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001569 355.0
DYD2_k127_3169328_1 COGs COG1028 Dehydrogenase with different specificities (related to short-chain alcohol dehydrogenase) - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000001891 268.0
DYD2_k127_3169328_2 - - - - 0.00000000000000000000000000000000000004221 147.0
DYD2_k127_3173278_0 Belongs to the glycosyl hydrolase 28 family - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001816 417.0
DYD2_k127_3173278_1 COGs COG2208 Serine phosphatase RsbU regulator of sigma subunit - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006603 395.0
DYD2_k127_3173278_2 Transposase IS200 like - - - 0.0000000000000000000000000000000000000000001454 160.0
DYD2_k127_3175155_0 Glycosyl hydrolase family 3 N terminal domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002311 325.0
DYD2_k127_3175374_0 Aerotolerance regulator N-terminal - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000003858 275.0
DYD2_k127_3202546_0 Belongs to the aldehyde dehydrogenase family K00128,K10217 - 1.2.1.3,1.2.1.32,1.2.1.85 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001466 529.0
DYD2_k127_3215304_0 Prenyltransferase that catalyzes the transfer of the geranylgeranyl moiety of geranylgeranyl diphosphate (GGPP) to the C3 hydroxyl of sn-glycerol-1-phosphate (G1P) K07094 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007997 340.0
DYD2_k127_3215304_1 sequence-specific DNA binding K02529 - - 0.0000000000000000000000000000000000002162 144.0
DYD2_k127_3215304_2 Putative Actinobacterial Holin-X, holin superfamily III - - - 0.0000000008182 64.0
DYD2_k127_3215304_4 Na+/Pi-cotransporter K14683 - - 0.0001615 51.0
DYD2_k127_3222646_0 Domain present in phytochromes and cGMP-specific phosphodiesterases. K03406 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000002003 278.0
DYD2_k127_3222646_1 PFAM 3-Oxoacyl- acyl-carrier-protein (ACP) synthase III K00648 - 2.3.1.180 0.000000000000000000000000000000000000000000000000000000000000000000000000009431 253.0
DYD2_k127_3222646_2 Putative MetA-pathway of phenol degradation - - - 0.000000000000000000000000000000000000000000000000000000000001503 218.0
DYD2_k127_3222646_3 CotH kinase protein - - - 0.00001587 49.0
DYD2_k127_3223368_0 Succinyl-CoA synthetase functions in the citric acid cycle (TCA), coupling the hydrolysis of succinyl-CoA to the synthesis of either ATP or GTP and thus represents the only step of substrate-level phosphorylation in the TCA. The alpha subunit of the enzyme binds the substrates coenzyme A and phosphate, while succinate binding and nucleotide specificity is provided by the beta subunit K01902 - 6.2.1.5 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002229 518.0
DYD2_k127_3223368_1 ABC-type antimicrobial peptide transport system, permease component K02004 - - 0.00000000000000000000000000000000000000000000000000000000000000000000005691 243.0
DYD2_k127_3223368_2 transferase activity, transferring glycosyl groups K00754 - - 0.0000000000000000000000000000000000000000000000000000000000000000186 231.0
DYD2_k127_3232234_0 Pyridoxal-dependent decarboxylase conserved domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003117 415.0
DYD2_k127_3232234_1 Pyridoxal-dependent decarboxylase conserved domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000558 395.0
DYD2_k127_3234515_0 Domain present in phytochromes and cGMP-specific phosphodiesterases. - - - 1.33e-239 756.0
DYD2_k127_3234515_1 Protein of unknown function (DUF3365) - - - 0.00003576 52.0
DYD2_k127_324203_0 Putative modulator of DNA gyrase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000189 265.0
DYD2_k127_324203_1 Beta-lactamase - - - 0.0000000000000000000000000000000000000000000000000000000000000212 217.0
DYD2_k127_324203_2 metallopeptidase activity K03592 - - 0.00000000000000000000000000000004806 127.0
DYD2_k127_3243520_0 PIN domain K07175 - - 2.661e-232 724.0
DYD2_k127_3243520_1 Aldolase K11645 - 4.1.2.13 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003106 584.0
DYD2_k127_3243520_2 Component of the acetyl coenzyme A carboxylase (ACC) complex. Biotin carboxylase (BC) catalyzes the carboxylation of biotin on its carrier protein (BCCP) and then the CO(2) group is transferred by the transcarboxylase to acetyl-CoA to form malonyl- CoA K01963 - 2.1.3.15,6.4.1.2 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001801 443.0
DYD2_k127_3243520_3 TIGRFAM Nicotinamide mononucleotide transporter PnuC K03811 - - 0.000000000000000000000000000000000000000000000000000000002411 207.0
DYD2_k127_3243520_4 ATPase kinase involved in NAD metabolism - - - 0.0000000000000000000000000000000000000000000000003091 181.0
DYD2_k127_3243520_5 von Willebrand factor (vWF) type A domain - - - 0.000000000000000006517 87.0
DYD2_k127_3252904_0 PFAM Alpha amylase, catalytic K01176,K01208 GO:0000272,GO:0000287,GO:0001871,GO:0003674,GO:0003824,GO:0004553,GO:0004556,GO:0005488,GO:0005509,GO:0005575,GO:0005975,GO:0005976,GO:0005982,GO:0005983,GO:0006073,GO:0008150,GO:0008152,GO:0009056,GO:0009057,GO:0009251,GO:0009987,GO:0016020,GO:0016052,GO:0016160,GO:0016787,GO:0016798,GO:0019867,GO:0030246,GO:0030247,GO:0043167,GO:0043169,GO:0043170,GO:0044042,GO:0044237,GO:0044238,GO:0044247,GO:0044248,GO:0044260,GO:0044262,GO:0044264,GO:0044275,GO:0046872,GO:0071704,GO:1901575,GO:2001070 3.2.1.1,3.2.1.133,3.2.1.135,3.2.1.54 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007448 398.0
DYD2_k127_3252904_1 PFAM Periplasmic binding protein LacI transcriptional regulator K02529,K05499 - - 0.00000000000000000000000000000000000000000000000000000005579 198.0
DYD2_k127_3259507_0 Two component regulator propeller - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002442 492.0
DYD2_k127_3259507_1 thymidine kinase K00857 GO:0003674,GO:0003824,GO:0004797,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006139,GO:0006213,GO:0006259,GO:0006725,GO:0006753,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009116,GO:0009117,GO:0009120,GO:0009123,GO:0009124,GO:0009157,GO:0009162,GO:0009165,GO:0009987,GO:0016301,GO:0016310,GO:0016740,GO:0016772,GO:0018130,GO:0019136,GO:0019205,GO:0019206,GO:0019438,GO:0019637,GO:0034641,GO:0034654,GO:0043170,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044271,GO:0044281,GO:0044424,GO:0044444,GO:0044464,GO:0046104,GO:0046125,GO:0046483,GO:0055086,GO:0071704,GO:0072527,GO:0090304,GO:0090407,GO:1901135,GO:1901293,GO:1901360,GO:1901362,GO:1901564,GO:1901576,GO:1901657 2.7.1.21 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002843 300.0
DYD2_k127_3259507_2 PFAM 2Fe-2S iron-sulfur cluster binding domain K04755 - - 0.00000000000000000000000000000006349 127.0
DYD2_k127_3259507_3 Interacts with outer membrane receptor proteins that carry out high-affinity binding and energy dependent uptake into the periplasmic space of specific substrates. It could act to transduce energy from the cytoplasmic membrane to specific energy- requiring processes in the outer membrane, resulting in the release into the periplasm of ligands bound by these outer membrane proteins - - - 0.000000000000000000001445 99.0
DYD2_k127_3274664_0 Rhodanese Homology Domain K06917 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006018 401.0
DYD2_k127_3274664_1 Rhodanese Homology Domain K06917 - - 0.0000000001249 63.0
DYD2_k127_3281934_0 Catalyzes the attachment of tyrosine to tRNA(Tyr) in a two-step reaction tyrosine is first activated by ATP to form Tyr- AMP and then transferred to the acceptor end of tRNA(Tyr) K01866 GO:0003674,GO:0003824,GO:0004812,GO:0004831,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006082,GO:0006139,GO:0006399,GO:0006520,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0009987,GO:0016070,GO:0016874,GO:0016875,GO:0019752,GO:0034641,GO:0034660,GO:0043038,GO:0043039,GO:0043170,GO:0043436,GO:0044237,GO:0044238,GO:0044281,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0071704,GO:0090304,GO:0140098,GO:0140101,GO:1901360,GO:1901564 6.1.1.1 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002106 584.0
DYD2_k127_3281934_1 Belongs to the thiolase family K00626 - 2.3.1.9 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004957 344.0
DYD2_k127_3285992_0 Subtilase family - - - 1.382e-233 737.0
DYD2_k127_3287109_0 TIGRFAM DivIVA domain K04074 - - 0.0000000000000000000000000000000000000000000000000000000000002582 218.0
DYD2_k127_3287109_1 PFAM WD domain, G-beta repeat - - - 0.000000000000000000000000000000000000000000000000000002361 194.0
DYD2_k127_3287109_2 Catalyzes the conversion of 7,8-dihydroneopterin to 6- hydroxymethyl-7,8-dihydropterin K01633 - 1.13.11.81,4.1.2.25,5.1.99.8 0.00000000000000000000000000000000007983 136.0
DYD2_k127_3298718_0 Belongs to the ATCase OTCase family K00609 GO:0003674,GO:0003824,GO:0004070,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006139,GO:0006220,GO:0006221,GO:0006725,GO:0006753,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009117,GO:0009165,GO:0009218,GO:0009220,GO:0009259,GO:0009260,GO:0009987,GO:0016740,GO:0016741,GO:0016743,GO:0018130,GO:0019438,GO:0019637,GO:0019693,GO:0034641,GO:0034654,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0044424,GO:0044464,GO:0046390,GO:0046483,GO:0055086,GO:0071704,GO:0072527,GO:0072528,GO:0090407,GO:1901135,GO:1901137,GO:1901293,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576 2.1.3.2 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005979 536.0
DYD2_k127_3298718_1 Pyrimidine operon attenuation protein uracil phosphoribosyltransferase K02825 - 2.4.2.9 0.00000000000000004639 81.0
DYD2_k127_3298718_2 Cystathionine beta-synthase K01697 - 4.2.1.22 0.0000000000000005317 77.0
DYD2_k127_3309959_0 photoreceptor activity - - - 0.0000000000000000001232 91.0
DYD2_k127_3309959_1 Histidine kinase - - - 0.00000000000003721 83.0
DYD2_k127_3320459_0 Catalyzes the reversible conversion of 2- phosphoglycerate into phosphoenolpyruvate. It is essential for the degradation of carbohydrates via glycolysis K01689 - 4.2.1.11 6.439e-231 719.0
DYD2_k127_3320459_1 Septum formation initiator - - - 0.00000000000000000000000000002467 120.0
DYD2_k127_3320459_2 Belongs to the CarA family K01956 - 6.3.5.5 0.0000000000000000000000006344 104.0
DYD2_k127_3329607_0 TIGRFAM MiaB-like tRNA modifying enzyme K18707 - 2.8.4.5 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009353 606.0
DYD2_k127_3331228_0 oxidoreductase activity - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000003097 276.0
DYD2_k127_3351453_0 PFAM Cys Met metabolism PLP-dependent enzyme K01740 - 2.5.1.49 3.899e-222 692.0
DYD2_k127_3366008_0 Belongs to the glycosyl hydrolase 31 family K01187 - 3.2.1.20 3.872e-258 807.0
DYD2_k127_3366008_1 Belongs to the glycosyl hydrolase 31 family K01187 - 3.2.1.20 0.0000000000000000000000000002444 116.0
DYD2_k127_3366008_2 PFAM Periplasmic binding protein LacI transcriptional regulator K02529 - - 0.0004362 43.0
DYD2_k127_3385878_0 Caspase domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000001995 295.0
DYD2_k127_3385878_1 CHAT domain - - - 0.000000000000000000000000000000000000000000000000000000000002023 219.0
DYD2_k127_3392926_0 Catalyzes the transfer of a ribosyl phosphate group from 5-phosphoribose 1-diphosphate to orotate, leading to the formation of orotidine monophosphate (OMP) K00762,K13421 - 2.4.2.10,4.1.1.23 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005837 301.0
DYD2_k127_3392926_1 NUDIX domain - - - 0.000003452 52.0
DYD2_k127_3398846_0 Redoxin - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004201 402.0
DYD2_k127_3398846_1 CoA-transferase family III - - - 0.00000000000000000000000000000000000000009816 152.0
DYD2_k127_3401327_0 PFAM Cys Met metabolism PLP-dependent enzyme K01739,K01758,K01760 - 2.5.1.48,4.4.1.1,4.4.1.8 5.645e-202 633.0
DYD2_k127_3401327_1 Pkd domain containing protein - - - 0.0000007089 57.0
DYD2_k127_3417245_0 DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates K03046 GO:0000428,GO:0005575,GO:0005622,GO:0005623,GO:0030880,GO:0032991,GO:0044424,GO:0044464,GO:0061695,GO:1902494,GO:1990234 2.7.7.6 2.718e-240 747.0
DYD2_k127_3432327_0 Has lipid A 3-O-deacylase activity. Hydrolyzes the ester bond at the 3 position of lipid A, a bioactive component of lipopolysaccharide (LPS), thereby releasing the primary fatty acyl moiety - - - 0.000000000000000000000000000000000000000000000000000000000000000002254 237.0
DYD2_k127_3432327_1 Pfam:HipA_N K07154 - 2.7.11.1 0.00000000000000000000000000000000000000000000007072 171.0
DYD2_k127_3432327_2 Helix-turn-helix domain - - - 0.00000000000000000000000000000000001096 138.0
DYD2_k127_3432327_3 COGs COG2208 Serine phosphatase RsbU regulator of sigma subunit - - - 0.0000000000000002705 81.0
DYD2_k127_3441567_0 7TMR-DISM extracellular 2 K20971 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001183 310.0
DYD2_k127_3441567_1 PFAM TonB-dependent Receptor Plug - - - 0.00000000000000000000021 99.0
DYD2_k127_3442764_0 S-adenosyl-L-methionine-dependent methyltransferase - - - 0.00000000000000000000000000000000000000000000000000000000000000000001044 240.0
DYD2_k127_3442764_1 Involved in the biosynthesis of isopentenyl diphosphate (IPP) and dimethylallyl diphosphate (DMAPP), two major building blocks of isoprenoid compounds. Catalyzes the conversion of 4- diphosphocytidyl-2-C-methyl-D-erythritol 2-phosphate (CDP-ME2P) to 2-C-methyl-D-erythritol 2,4-cyclodiphosphate (ME-CPP) with a corresponding release of cytidine 5-monophosphate (CMP) K01770 - 4.6.1.12 0.000000000000000000000000000001053 122.0
DYD2_k127_3442764_2 helix_turn_helix, arabinose operon control protein - - - 0.00002848 47.0
DYD2_k127_3444501_0 Converts heme B (protoheme IX) to heme O by substitution of the vinyl group on carbon 2 of heme B porphyrin ring with a hydroxyethyl farnesyl side group K02257 - 2.5.1.141 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000684 434.0
DYD2_k127_3444501_1 PFAM cytochrome c oxidase subunit III K02276 - 1.9.3.1 0.00000000000000000000000000000000000000000000000000000000000000000000000003243 254.0
DYD2_k127_3444501_2 cytochrome c oxidase subunit III K02276 - 1.9.3.1 0.0000000000000000000000000000000000000000000000000000000000000000000000004047 250.0
DYD2_k127_3444501_3 Cytochrome oxidase assembly protein K02259 - - 0.00000000000000000000000604 105.0
DYD2_k127_3447094_0 COGs COG2220 Zn-dependent hydrolase of the beta-lactamase fold - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008157 417.0
DYD2_k127_3447094_1 Bacterial regulatory proteins, tetR family - - - 0.00000000000000000000000001199 111.0
DYD2_k127_3447094_2 Beta-lactamase superfamily domain - - - 0.00000000000000000000000005832 108.0
DYD2_k127_3447874_0 Carboxypeptidase regulatory-like domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000004512 234.0
DYD2_k127_3447874_1 - - - - 0.000006036 55.0
DYD2_k127_3450058_0 it binds specifically double-stranded DNA at a 9 bp consensus (dnaA box) 5'-TTATC CA A CA A-3'. DnaA binds to ATP and to acidic phospholipids K02313 GO:0003674,GO:0003676,GO:0003677,GO:0003688,GO:0003690,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005886,GO:0006139,GO:0006259,GO:0006260,GO:0006261,GO:0006270,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0016020,GO:0034641,GO:0034645,GO:0043170,GO:0043565,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044424,GO:0044464,GO:0046483,GO:0071704,GO:0071944,GO:0090304,GO:0097159,GO:1901360,GO:1901363,GO:1901576,GO:1990837 - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001269 594.0
DYD2_k127_3450058_1 Methylmalonyl-CoA mutase N-terminal domain subunit K01847 - 5.4.99.2 0.000000000000000000000000000000000000000000000000000000000000000000000000000000003433 283.0
DYD2_k127_3450058_2 DNA RNA non-specific endonuclease K01173 - - 0.000000000000000000000000000000000000000000000000000000000000000000001372 245.0
DYD2_k127_3455396_0 PFAM Glutamine amidotransferase, class-II K00764 - 2.4.2.14 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008529 369.0
DYD2_k127_3455396_1 NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be a menaquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient K00343 - 1.6.5.3 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001635 366.0
DYD2_k127_3455396_2 TIGRFAM proton-translocating NADH-quinone oxidoreductase, chain M K00342 - 1.6.5.3 0.00000000000000000000000000000149 123.0
DYD2_k127_3460568_0 transporter of a GTP-driven Fe(2 ) uptake system K04759 - - 3.484e-198 631.0
DYD2_k127_3460568_1 Protein of unknown function (DUF1698) - - - 0.0000000000000000000000000000000000000001129 157.0
DYD2_k127_3460568_2 FeoA K04758 - - 0.000000000000000000001394 96.0
DYD2_k127_3460924_0 Allows the formation of correctly charged Asn-tRNA(Asn) or Gln-tRNA(Gln) through the transamidation of misacylated Asp- tRNA(Asn) or Glu-tRNA(Gln) in organisms which lack either or both of asparaginyl-tRNA or glutaminyl-tRNA synthetases. The reaction takes place in the presence of glutamine and ATP through an activated phospho-Asp-tRNA(Asn) or phospho-Glu-tRNA(Gln) K02434 - 6.3.5.6,6.3.5.7 1.804e-225 706.0
DYD2_k127_3460924_1 Catalyzes the attachment of alanine to tRNA(Ala) in a two-step reaction alanine is first activated by ATP to form Ala- AMP and then transferred to the acceptor end of tRNA(Ala). Also edits incorrectly charged Ser-tRNA(Ala) and Gly-tRNA(Ala) via its editing domain K01872 GO:0003674,GO:0003824,GO:0004812,GO:0004813,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006082,GO:0006139,GO:0006396,GO:0006399,GO:0006400,GO:0006412,GO:0006418,GO:0006419,GO:0006518,GO:0006520,GO:0006725,GO:0006807,GO:0008033,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009451,GO:0009987,GO:0010467,GO:0016070,GO:0016597,GO:0016874,GO:0016875,GO:0019538,GO:0019752,GO:0031406,GO:0034470,GO:0034641,GO:0034645,GO:0034660,GO:0036094,GO:0043038,GO:0043039,GO:0043043,GO:0043167,GO:0043168,GO:0043170,GO:0043177,GO:0043412,GO:0043436,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044281,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0071704,GO:0090304,GO:0140098,GO:0140101,GO:1901360,GO:1901564,GO:1901566,GO:1901576 6.1.1.7 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001004 601.0
DYD2_k127_3464286_0 TonB-dependent Receptor Plug Domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007601 508.0
DYD2_k127_3465446_0 PFAM GSCFA family - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000614 245.0
DYD2_k127_3465446_1 COGs COG1331 Highly conserved protein containing a thioredoxin domain K06888 - - 0.00000000000000000000000000000000000000000000000000000000000000000635 228.0
DYD2_k127_3467286_0 Catalyzes the acyloin condensation reaction between C atoms 2 and 3 of pyruvate and glyceraldehyde 3-phosphate to yield 1-deoxy-D-xylulose-5-phosphate (DXP) K01662 - 2.2.1.7 2.874e-250 777.0
DYD2_k127_3467286_1 Alpha/beta hydrolase family - - - 0.00000000000000000000000000000000000000000000000000000005406 202.0
DYD2_k127_3471611_0 enterobactin catabolic process K07214 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000555 313.0
DYD2_k127_3471611_1 repeat protein - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000005763 289.0
DYD2_k127_3471611_2 - - - - 0.00000000000000000000000000000000005529 141.0
DYD2_k127_3471611_3 - - - - 0.0003345 45.0
DYD2_k127_347487_0 ABC transporter K19340 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004348 306.0
DYD2_k127_347487_1 ABC-2 family transporter protein K19341 - - 0.0000000000000000000000000000000000000007011 151.0
DYD2_k127_3477831_0 Asparagine synthase K01953 - 6.3.5.4 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001346 563.0
DYD2_k127_3477831_1 - - - - 0.0000003013 54.0
DYD2_k127_3477831_2 Nucleotidyl transferase of unknown function (DUF2204) - - - 0.00001996 51.0
DYD2_k127_3478099_0 leucine binding - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002638 473.0
DYD2_k127_3478099_1 PFAM Peptidase family M20 M25 M40 K01436 - - 0.0000000000000000000000000000001823 124.0
DYD2_k127_3486769_0 Transketolase, pyrimidine binding domain K11381 - 1.2.4.4 1.545e-283 878.0
DYD2_k127_349010_0 this subunit has chaperone activity. The binding of ATP and its subsequent hydrolysis by HslU are essential for unfolding of protein substrates subsequently hydrolyzed by HslV. HslU recognizes the N-terminal part of its protein substrates and unfolds these before they are guided to HslV for hydrolysis K03667 - - 7.52e-219 687.0
DYD2_k127_349010_1 penicillin-binding protein - - - 0.0000000000000000000000000000000000000000000000000000000000000000005588 234.0
DYD2_k127_3495860_0 DNA ligase that catalyzes the formation of phosphodiester linkages between 5'-phosphoryl and 3'-hydroxyl groups in double-stranded DNA using NAD as a coenzyme and as the energy source for the reaction. It is essential for DNA replication and repair of damaged DNA K01972 GO:0003674,GO:0003824,GO:0003909,GO:0003911,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006139,GO:0006259,GO:0006266,GO:0006281,GO:0006284,GO:0006288,GO:0006725,GO:0006807,GO:0006950,GO:0006974,GO:0008150,GO:0008152,GO:0009987,GO:0016874,GO:0016886,GO:0033554,GO:0034641,GO:0043170,GO:0044237,GO:0044238,GO:0044260,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0050896,GO:0051103,GO:0051716,GO:0071704,GO:0090304,GO:0140097,GO:1901360 6.5.1.2 1.3e-254 795.0
DYD2_k127_3505151_0 PAS fold - - - 0.000000000000000000000000000000000000000002314 162.0
DYD2_k127_3505151_1 response regulator - - - 0.00000000000000000000000001074 114.0
DYD2_k127_3512021_0 TIGRFAM Bacteroidetes-specific - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000001523 284.0
DYD2_k127_3512021_1 amine dehydrogenase activity - - - 0.0000000000000000000000000000000000000001848 151.0
DYD2_k127_352002_0 amine dehydrogenase activity - - - 0.00000000000000000000000000000000000000000000000004367 207.0
DYD2_k127_352002_1 Lytic transglycosylase with a strong preference for naked glycan strands that lack stem peptides - - - 0.0000000000000000000000000000000000002103 165.0
DYD2_k127_352002_2 protein secretion K20276 - - 0.0000000000000000000000001428 126.0
DYD2_k127_352002_3 domain, Protein - - - 0.0000000000000000000008861 101.0
DYD2_k127_352002_4 negative chemotaxis - - - 0.000000000002568 82.0
DYD2_k127_352002_5 peptide catabolic process - - - 0.00000000001015 80.0
DYD2_k127_3524756_0 Belongs to the MurCDEF family K01924 - 6.3.2.8 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004158 394.0
DYD2_k127_3525256_0 TIGRFAM ComEC Rec2-related protein K02238 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000844 495.0
DYD2_k127_3525256_1 Belongs to the enoyl-CoA hydratase isomerase family K13766 - 4.2.1.18 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007782 363.0
DYD2_k127_3525256_2 COG1680 Beta-lactamase class C and other penicillin binding proteins - - - 0.00000002047 56.0
DYD2_k127_352712_0 Peptidase family C25 - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000001945 276.0
DYD2_k127_3529170_0 PFAM response regulator receiver - - - 0.0000000000000000000000000000000000000000000000000000005183 199.0
DYD2_k127_3529170_1 histidine kinase dimerisation and phosphoacceptor region - - - 0.0000000000000000000000000000000000000000000000000004021 190.0
DYD2_k127_3529170_2 PFAM Scaffold protein Nfu NifU N terminal - - - 0.00000000000006239 71.0
DYD2_k127_3537811_0 Motility related/secretion protein - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001989 467.0
DYD2_k127_3537811_1 The glycine cleavage system catalyzes the degradation of glycine. The H protein shuttles the methylamine group of glycine from the P protein to the T protein K02437 - - 0.00000000001744 64.0
DYD2_k127_3558603_0 Involved in the gluconeogenesis. Catalyzes the conversion of oxaloacetate (OAA) to phosphoenolpyruvate (PEP) through direct phosphoryl transfer between the nucleoside triphosphate and OAA K01610 - 4.1.1.49 4e-252 782.0
DYD2_k127_3563239_0 4Fe-4S dicluster domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003958 574.0
DYD2_k127_3563239_1 PFAM Cysteine-rich domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000697 490.0
DYD2_k127_3570291_0 Outer membrane protein beta-barrel domain - - - 0.0000000000000000000000000000000000000000000000000000000000000006173 226.0
DYD2_k127_3570291_1 Belongs to the ompA family - - - 0.00000000000000000000000000003961 118.0
DYD2_k127_3570465_0 - - - - 0.0000000000000000000000000000000000000000000000001218 179.0
DYD2_k127_3570465_1 AraC family - - - 0.000000000000000000000000000000000000000001338 164.0
DYD2_k127_3570465_2 Bacteriocin-protection, YdeI or OmpD-Associated - - - 0.0000000000000000000000000000000000005045 143.0
DYD2_k127_3571649_0 Metallopeptidase family M24 - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000001685 291.0
DYD2_k127_3571649_1 PFAM aminotransferase class V - - - 0.000000000000000072 84.0
DYD2_k127_3574602_0 Dehydrogenase E1 component K00615 - 2.2.1.1 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002117 418.0
DYD2_k127_3574602_1 Protein of unknown function (DUF1573) - - - 0.0000000000000000000000000001049 118.0
DYD2_k127_3586754_0 Peptidase S8 and S53 subtilisin kexin sedolisin - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002625 399.0
DYD2_k127_3586754_1 ABC-type multidrug transport system ATPase component - - - 0.0000000000000000000000000000002252 130.0
DYD2_k127_3586754_2 Belongs to the peptidase M24B family K01262 - 3.4.11.9 0.00000000000000000000000000003499 117.0
DYD2_k127_359745_0 PFAM TonB-dependent Receptor Plug - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002849 459.0
DYD2_k127_3602966_0 Y_Y_Y domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007603 474.0
DYD2_k127_3604408_0 OmpA family - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003765 469.0
DYD2_k127_3604408_1 Putative zinc- or iron-chelating domain K06940 - - 0.0000000000000000000000000000000000000000000000000000000004113 206.0
DYD2_k127_3608093_0 ABC-type transport system involved in lipoprotein release permease component K09808 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000004801 294.0
DYD2_k127_3608093_1 PFAM Uncharacterised conserved protein UCP016719 - - - 0.00000000000000000000000000000000000000000000000000000000000001445 220.0
DYD2_k127_3615776_0 Belongs to the DEAD box helicase family K05592 - 3.6.4.13 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002093 514.0
DYD2_k127_3615776_1 ABC-type antimicrobial peptide transport system, permease component K02004 - - 0.000000004797 58.0
DYD2_k127_3619708_0 Tetratricopeptide repeat - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001294 408.0
DYD2_k127_3619708_1 - - - - 0.0000000000000000000000000000000000000000235 156.0
DYD2_k127_3622359_0 PFAM SpoU rRNA Methylase family - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000992 246.0
DYD2_k127_3622359_1 TIGRFAM RNA polymerase sigma factor, sigma-70 family K03088 - - 0.00000000000000000000000000000000000000000000000000000005946 201.0
DYD2_k127_3625234_0 prohibitin homologues K07192 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001129 385.0
DYD2_k127_3625234_1 - - - - 0.0000000000000000000000000000000000000000000000000000000004197 207.0
DYD2_k127_3626452_0 hemerythrin HHE cation binding domain - - - 0.000000000000000000000000000000000000000000000000296 181.0
DYD2_k127_3626452_1 transcriptional regulator - - - 0.000000000000000000000000000000000000000000000001288 177.0
DYD2_k127_3626452_2 Catalyzes the condensation of iminoaspartate with dihydroxyacetone phosphate to form quinolinate K03517 - 2.5.1.72 0.000000000000000000000000000000000000007324 148.0
DYD2_k127_3641648_0 PFAM Cytidine and deoxycytidylate deaminase zinc-binding region K01493 - 3.5.4.12 0.0000000000000000000000000000000000000000000000000000000000000000000000000004108 258.0
DYD2_k127_3641648_1 His Kinase A (phosphoacceptor) domain - - - 0.00000000000000000000000000000000000000000000000000000008772 203.0
DYD2_k127_3644712_0 Periplasmic copper-binding protein (NosD) - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000219 369.0
DYD2_k127_3644712_1 Acyltransferase family K11941 - - 0.000000000000000000000002748 103.0
DYD2_k127_3652822_0 PFAM Carbamoyl-phosphate synthase L chain, ATP binding K01961,K01965 - 6.3.4.14,6.4.1.2,6.4.1.3 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006085 460.0
DYD2_k127_3652822_1 PFAM Aminotransferase class I and II K00639 - 2.3.1.29 0.0000000000000000000000000000000000000000000000001256 177.0
DYD2_k127_3655908_0 Beta-lactamase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002608 368.0
DYD2_k127_3655908_1 CAAX protease self-immunity - - - 0.000000001023 64.0
DYD2_k127_3675918_0 enoyl-CoA hydratase isomerase family K15866 - 5.3.3.18 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001142 389.0
DYD2_k127_3675918_1 uracil phosphoribosyltransferase K00761 - 2.4.2.9 0.0000000000000000000000000000000000000000001154 162.0
DYD2_k127_3675918_2 phosphoesterase, PA-phosphatase related - - - 0.0000002563 53.0
DYD2_k127_3693808_0 Belongs to the UPF0176 family K07146 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000184 562.0
DYD2_k127_3693808_1 sugar O-acyltransferase, sialic acid O-acetyltransferase NeuD family - - - 0.000000000000000000000000000000000000000000000000004935 183.0
DYD2_k127_3714447_0 Nucleotidase that shows phosphatase activity on nucleoside 5'-monophosphates K03787 - 3.1.3.5 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001082 441.0
DYD2_k127_3714447_1 - - - - 0.00000005841 56.0
DYD2_k127_3716421_0 PFAM ATPase family associated with various cellular activities (AAA) K03924 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007804 529.0
DYD2_k127_3716421_1 Pyridoxal-phosphate dependent enzyme K01505,K05396 - 3.5.99.7,4.4.1.15 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003871 316.0
DYD2_k127_3716421_2 EamA-like transporter family K05786 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006582 306.0
DYD2_k127_3716421_3 PIN domain - - - 0.000000000000000000000004082 104.0
DYD2_k127_3716421_4 EamA-like transporter family - - - 0.00000000000000007705 84.0
DYD2_k127_3717457_0 PAS fold - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001128 445.0
DYD2_k127_3719341_0 DNA polymerase III is a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria. This DNA polymerase also exhibits 3' to 5' exonuclease activity K02343 - 2.7.7.7 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003284 551.0
DYD2_k127_3719341_1 Protein of unknown function (DUF4240) - - - 0.0000000000000000469 89.0
DYD2_k127_3719341_2 Protein of unknown function, DUF481 - - - 0.0000000000008904 72.0
DYD2_k127_3719341_3 Outer membrane protein beta-barrel domain - - - 0.0002943 51.0
DYD2_k127_3720440_0 Crp-like helix-turn-helix domain K10914 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000008977 288.0
DYD2_k127_3720440_1 protein SCO1 SenC PrrC involved in biogenesis of respiratory and photosynthetic systems K07152 - - 0.0000000000000000000000000000000000000000000000000000000000000003212 224.0
DYD2_k127_3720440_2 PFAM Uncharacterised protein family (UPF0093) K08973 - - 0.0000000000000000000000000000000000000000000000000000000000004377 217.0
DYD2_k127_3726986_0 TIGRFAM phytoene desaturase K10027 - 1.3.99.26,1.3.99.28,1.3.99.29,1.3.99.31 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000273 434.0
DYD2_k127_3726986_1 Belongs to the sigma-70 factor family. ECF subfamily K03088 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000003458 293.0
DYD2_k127_3726986_2 PFAM MerR family regulatory protein K22491 - - 0.0000000000000000000000000000000000000000000000000000006681 196.0
DYD2_k127_3730883_0 Conserved hypothetical protein (DUF2461) - - - 0.000000000000000000000000000000000000000001485 158.0
DYD2_k127_3730883_1 Catalyzes the oxidation of glucose 6-phosphate to 6- phosphogluconolactone K00036 - 1.1.1.363,1.1.1.49 0.0000000000117 75.0
DYD2_k127_3741379_0 photoreceptor activity - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009783 578.0
DYD2_k127_3744498_0 PFAM amidohydrolase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003373 384.0
DYD2_k127_3744498_1 PFAM amidohydrolase - - - 0.00000000000000000000000000000000006425 138.0
DYD2_k127_3746356_0 Part of the Sec protein translocase complex. Interacts with the SecYEG preprotein conducting channel. Has a central role in coupling the hydrolysis of ATP to the transfer of proteins into and across the cell membrane, serving as an ATP-driven molecular motor driving the stepwise translocation of polypeptide chains across the membrane K03070 GO:0000166,GO:0003674,GO:0003824,GO:0005215,GO:0005488,GO:0005524,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005886,GO:0005887,GO:0006810,GO:0008104,GO:0008144,GO:0008150,GO:0008320,GO:0008565,GO:0015031,GO:0015399,GO:0015405,GO:0015440,GO:0015450,GO:0015462,GO:0015833,GO:0016020,GO:0016021,GO:0016462,GO:0016787,GO:0016817,GO:0016818,GO:0016887,GO:0017076,GO:0017111,GO:0022804,GO:0022857,GO:0022884,GO:0030554,GO:0031224,GO:0031226,GO:0031522,GO:0032553,GO:0032555,GO:0032559,GO:0032991,GO:0033036,GO:0033220,GO:0035639,GO:0036094,GO:0042623,GO:0042626,GO:0042886,GO:0042887,GO:0043167,GO:0043168,GO:0043492,GO:0043952,GO:0044424,GO:0044425,GO:0044444,GO:0044459,GO:0044464,GO:0045184,GO:0051179,GO:0051234,GO:0055085,GO:0071702,GO:0071705,GO:0071806,GO:0071944,GO:0097159,GO:0097367,GO:1901265,GO:1901363,GO:1904680 - 5.735e-285 880.0
DYD2_k127_3772536_0 Transglutaminase-like superfamily - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009599 550.0
DYD2_k127_3772536_1 helicase activity - - - 0.0005401 43.0
DYD2_k127_3774465_0 An essential GTPase that binds both GDP and GTP, with rapid nucleotide exchange. Plays a role in 16S rRNA processing and 30S ribosomal subunit biogenesis and possibly also in cell cycle regulation and energy metabolism K03595 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007724 400.0
DYD2_k127_3774465_1 GTPase that plays an essential role in the late steps of ribosome biogenesis K03977 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009893 390.0
DYD2_k127_3777077_0 Catalyzes the condensation reaction of fatty acid synthesis by the addition to an acyl acceptor of two carbons from malonyl-ACP K09458 - 2.3.1.179 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001963 443.0
DYD2_k127_3777077_1 Digests double-stranded RNA. Involved in the processing of primary rRNA transcript to yield the immediate precursors to the large and small rRNAs (23S and 16S). Processes some mRNAs, and tRNAs when they are encoded in the rRNA operon. Processes pre- crRNA and tracrRNA of type II CRISPR loci if present in the organism K03685 - 3.1.26.3 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000001054 281.0
DYD2_k127_3777077_2 helix_turn_helix, Lux Regulon - - - 0.00000000000000000000000000000000000000000000000000000003608 203.0
DYD2_k127_3777077_3 Two component regulator propeller - - - 0.00000000000000000000000000000000000000000000000000003891 197.0
DYD2_k127_3777077_4 Domain of unknown function (DUF4184) - - - 0.00000000000000000000000000000000000000000000001513 179.0
DYD2_k127_3778294_0 Catalyzes the NADPH-dependent reduction of glutamyl- tRNA(Glu) to glutamate 1-semialdehyde (GSA) K02492 - 1.2.1.70 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001348 405.0
DYD2_k127_3778294_1 Y_Y_Y domain - - - 0.00000000000000000000000000000000000000000000000000000003259 214.0
DYD2_k127_3781611_0 Belongs to the TRAFAC class translation factor GTPase superfamily. Classic translation factor GTPase family. CysN NodQ subfamily K00955,K00956 - 2.7.1.25,2.7.7.4 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000182 510.0
DYD2_k127_3781611_1 PFAM Phosphoadenosine phosphosulfate reductase K00957 - 2.7.7.4 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001096 490.0
DYD2_k127_3781611_2 Catalyzes the synthesis of activated sulfate K00860 GO:0003674,GO:0003824,GO:0004020,GO:0006793,GO:0006796,GO:0008150,GO:0008152,GO:0009987,GO:0016301,GO:0016310,GO:0016740,GO:0016772,GO:0016773,GO:0044237 2.7.1.25 0.0000000000000000000000000000000000000000000000000000000000000000000000000000001188 269.0
DYD2_k127_3781611_3 COGs COG0471 Di- and tricarboxylate transporter - - - 0.0000000000000003099 80.0
DYD2_k127_3781611_4 COGs COG0471 Di- and tricarboxylate transporter - - - 0.0000001375 53.0
DYD2_k127_3784364_0 Belongs to the ompA family - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003814 415.0
DYD2_k127_3815973_0 Phosphoglucomutase phosphomannomutase alpha beta alpha domain I K01835 - 5.4.2.2 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000006085 277.0
DYD2_k127_3820504_0 Histidine kinase - - - 0.00000000000000000000000002745 121.0
DYD2_k127_3838334_0 His Kinase A (phosphoacceptor) domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000237 250.0
DYD2_k127_3838334_1 Protein of unknown function (DUF2911) - - - 0.00000006023 55.0
DYD2_k127_3845717_0 COG1595 DNA-directed RNA polymerase specialized sigma subunit sigma24 homolog K03088 - - 0.00000000000000000000000000000000000000001299 160.0
DYD2_k127_3845717_1 aldehyde K00131 - 1.2.1.9 0.0000000000000000000000000000000000003535 140.0
DYD2_k127_3845717_2 Interacts with outer membrane receptor proteins that carry out high-affinity binding and energy dependent uptake into the periplasmic space of specific substrates. It could act to transduce energy from the cytoplasmic membrane to specific energy- requiring processes in the outer membrane, resulting in the release into the periplasm of ligands bound by these outer membrane proteins - - - 0.000000000000002613 85.0
DYD2_k127_3845717_3 ASPIC and UnbV - - - 0.00000612 57.0
DYD2_k127_3860209_0 Catalyzes the interconversion of L-alanine and D- alanine. May also act on other amino acids K01775,K01929 - 5.1.1.1,6.3.2.10 0.0000000000000000000000000000000000000000000000000000000000000000000000000001001 266.0
DYD2_k127_3860209_1 Predicted membrane protein (DUF2306) - - - 0.000000000000000000000000000006485 126.0
DYD2_k127_3865486_0 M6 family metalloprotease domain protein - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000004354 284.0
DYD2_k127_3867930_0 Forms passive diffusion pores that allow small molecular weight hydrophilic materials across the outer membrane - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000001614 283.0
DYD2_k127_3867981_0 Part of the Sec protein translocase complex. Interacts with the SecYEG preprotein conducting channel. SecDF uses the proton motive force (PMF) to complete protein translocation after the ATP-dependent function of SecA K03072,K12257 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007402 583.0
DYD2_k127_3879783_0 - - - - 0.00001784 57.0
DYD2_k127_3883273_0 argininosuccinate lyase K01755 GO:0003674,GO:0003824,GO:0004056,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006082,GO:0006520,GO:0006525,GO:0006526,GO:0006591,GO:0006807,GO:0008150,GO:0008152,GO:0008652,GO:0009058,GO:0009064,GO:0009084,GO:0009987,GO:0016053,GO:0016829,GO:0016840,GO:0016842,GO:0019752,GO:0042450,GO:0043436,GO:0044237,GO:0044238,GO:0044249,GO:0044281,GO:0044283,GO:0044424,GO:0044464,GO:0046394,GO:0071704,GO:1901564,GO:1901566,GO:1901576,GO:1901605,GO:1901607 4.3.2.1 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008364 587.0
DYD2_k127_3883273_1 PFAM Peptidase family M20 M25 M40 K01438 - 3.5.1.16 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003283 488.0
DYD2_k127_3883273_2 Fungal family of unknown function (DUF1776) - - - 0.000000000000000000000000000000004346 130.0
DYD2_k127_3892106_0 metabolite transporter - - - 0.00000000000000000000000000000000000000000000008967 176.0
DYD2_k127_3892106_1 Acetyltransferase (GNAT) domain - - - 0.000000000000000000000000000000000000000000003438 171.0
DYD2_k127_3893780_0 Catalyzes the attachment of glutamate to tRNA(Glu) in a two-step reaction glutamate is first activated by ATP to form Glu-AMP and then transferred to the acceptor end of tRNA(Glu) K01885 - 6.1.1.17 1.134e-237 740.0
DYD2_k127_3893780_1 TIGRFAM polyphosphate nucleotide phosphotransferase, PPK2 family - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000231 355.0
DYD2_k127_3893780_2 haloacid dehalogenase - - - 0.00000000000002166 73.0
DYD2_k127_3901256_0 GAF domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005311 420.0
DYD2_k127_3901256_1 PFAM peptidase U62 modulator of DNA gyrase - - - 0.00000000000000000000000003108 118.0
DYD2_k127_3908061_0 Nuclease that resolves Holliday junction intermediates in genetic recombination. Cleaves the cruciform structure in supercoiled DNA by nicking to strands with the same polarity at sites symmetrically opposed at the junction in the homologous arms and leaves a 5'-terminal phosphate and a 3'-terminal hydroxyl group K01159 - 3.1.22.4 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000005998 290.0
DYD2_k127_3908061_1 response to abiotic stimulus - - - 0.0000000000000000004468 92.0
DYD2_k127_3908061_2 Lysylphosphatidylglycerol synthase TM region K07027 - - 0.000000000000000009336 88.0
DYD2_k127_3912665_0 Amidohydrolase family - - - 0.0 1654.0
DYD2_k127_3912665_1 dienelactone hydrolase K01061 - 3.1.1.45 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001802 352.0
DYD2_k127_3912665_2 Belongs to the class-I aminoacyl-tRNA synthetase family K01869 GO:0003674,GO:0003824,GO:0004812,GO:0004823,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006082,GO:0006139,GO:0006399,GO:0006412,GO:0006418,GO:0006429,GO:0006518,GO:0006520,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0016070,GO:0016874,GO:0016875,GO:0019538,GO:0019752,GO:0034641,GO:0034645,GO:0034660,GO:0043038,GO:0043039,GO:0043043,GO:0043170,GO:0043436,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044281,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0071704,GO:0090304,GO:0140098,GO:0140101,GO:1901360,GO:1901564,GO:1901566,GO:1901576 6.1.1.4 0.0000000000000000000000000000000000000000000000000000000000000002534 222.0
DYD2_k127_3918098_0 Y_Y_Y domain - - - 0.0000000000000000000000000000000000000000000002327 181.0
DYD2_k127_3921422_0 Belongs to the ompA family - - - 0.0000000000000000000002537 102.0
DYD2_k127_3921422_1 phosphorelay signal transduction system - - - 0.00000000002255 68.0
DYD2_k127_3921422_2 Tetratricopeptide repeat - - - 0.000004015 58.0
DYD2_k127_3930228_0 This protein is involved in the repair of mismatches in DNA. It is required for dam-dependent methyl-directed DNA mismatch repair. May act as a molecular matchmaker , a protein that promotes the formation of a stable complex between two or more DNA-binding proteins in an ATP-dependent manner without itself being part of a final effector complex K03572 GO:0003674,GO:0003676,GO:0003677,GO:0003697,GO:0003824,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0006139,GO:0006259,GO:0006281,GO:0006298,GO:0006725,GO:0006807,GO:0006950,GO:0006974,GO:0008150,GO:0008152,GO:0009987,GO:0016462,GO:0016787,GO:0016817,GO:0016818,GO:0016887,GO:0017111,GO:0032300,GO:0032991,GO:0033554,GO:0034641,GO:0043170,GO:0044237,GO:0044238,GO:0044260,GO:0044424,GO:0044464,GO:0046483,GO:0050896,GO:0051716,GO:0071704,GO:0090304,GO:0097159,GO:1901360,GO:1901363,GO:1990391 - 1.908e-204 648.0
DYD2_k127_3930228_1 PFAM Rhomboid family K09650 - 3.4.21.105 0.000000000000000000000000000000000000000000000000000000000000000000000000099 253.0
DYD2_k127_3930228_2 This protein is involved in the repair of mismatches in DNA. It is required for dam-dependent methyl-directed DNA mismatch repair. May act as a molecular matchmaker , a protein that promotes the formation of a stable complex between two or more DNA-binding proteins in an ATP-dependent manner without itself being part of a final effector complex K03572 GO:0003674,GO:0003676,GO:0003677,GO:0003697,GO:0003824,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0006139,GO:0006259,GO:0006281,GO:0006298,GO:0006725,GO:0006807,GO:0006950,GO:0006974,GO:0008150,GO:0008152,GO:0009987,GO:0016462,GO:0016787,GO:0016817,GO:0016818,GO:0016887,GO:0017111,GO:0032300,GO:0032991,GO:0033554,GO:0034641,GO:0043170,GO:0044237,GO:0044238,GO:0044260,GO:0044424,GO:0044464,GO:0046483,GO:0050896,GO:0051716,GO:0071704,GO:0090304,GO:0097159,GO:1901360,GO:1901363,GO:1990391 - 0.000000000000000003755 85.0
DYD2_k127_3946963_0 PKD domain - - - 0.000000000000000000000000000000000000000000000002201 186.0
DYD2_k127_3951931_0 Multidrug ABC transporter ATPase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000004336 287.0
DYD2_k127_3951931_1 Peptidase family M1 domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000005891 283.0
DYD2_k127_3951931_2 COG1131 ABC-type multidrug transport system ATPase component - - - 0.0000000000000000000000000000008366 124.0
DYD2_k127_3958459_0 Belongs to the DEAD box helicase family K11927 - 3.6.4.13 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003934 565.0
DYD2_k127_3958459_1 The glycine cleavage system catalyzes the degradation of glycine. The P protein binds the alpha-amino group of glycine through its pyridoxal phosphate cofactor K00281,K00283 - 1.4.4.2 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009348 306.0
DYD2_k127_3964635_0 Y_Y_Y domain - - - 0.0000000000000000000000000000000000000000003859 173.0
DYD2_k127_3985735_0 transcriptional regulator - - - 0.000000000000000000000000000000000000000000000000000000000000002809 221.0
DYD2_k127_3985735_1 phosphate transporter K03306 - - 0.000000000000000000000000000000000000000000000000000000000000006029 219.0
DYD2_k127_3988378_0 Belongs to the MurCDEF family K03802 - 6.3.2.29,6.3.2.30 3.681e-262 812.0
DYD2_k127_3990069_0 Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family K00821 - 2.6.1.11,2.6.1.17 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001978 431.0
DYD2_k127_3990069_1 S-adenosylmethionine-dependent methyltransferase K06969 - 2.1.1.191 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008398 299.0
DYD2_k127_3991664_0 Carrier of the growing fatty acid chain in fatty acid biosynthesis K02078 - - 0.0000000000000000000000002271 108.0
DYD2_k127_3991664_1 - - - - 0.00000000000000000000005153 105.0
DYD2_k127_3997104_0 Alpha amylase, catalytic domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004641 506.0
DYD2_k127_3997104_1 Cold-shock protein K03704 - - 0.0000000000000000000000000005665 113.0
DYD2_k127_3997104_2 PFAM Radical SAM - - - 0.0000000000000000001556 93.0
DYD2_k127_4002559_0 PFAM Outer membrane efflux protein - - - 0.0000000000000000000000000000000000000000000000000000000000000183 225.0
DYD2_k127_4002559_1 Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family - - - 0.0000000000000000000000000000001617 127.0
DYD2_k127_4005865_0 In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity K02335 - 2.7.7.7 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002842 585.0
DYD2_k127_4010120_0 PFAM Outer membrane efflux protein - - - 0.0000000000000000000000000000000000000000000000000000000000000000000853 243.0
DYD2_k127_4012780_0 Involved in the de novo purine biosynthesis. Catalyzes the transfer of formate to 5-phospho-ribosyl-glycinamide (GAR), producing 5-phospho-ribosyl-N-formylglycinamide (FGAR). Formate is provided by PurU via hydrolysis of 10-formyl-tetrahydrofolate K08289 - 2.1.2.2 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001565 352.0
DYD2_k127_4012780_1 HutD - - - 0.000000000000000000000000000000000000002808 153.0
DYD2_k127_4019489_0 Domain of unknown function (DUF4837) - - - 0.00000000000000000000000000000000000000000000000000000000000001274 226.0
DYD2_k127_4019489_1 PFAM Transglycosylase SLT domain K08307 - - 0.000000000000888 70.0
DYD2_k127_4020383_0 Belongs to the MurCDEF family K01924 - 6.3.2.8 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006732 504.0
DYD2_k127_4020383_1 Cell wall formation. Catalyzes the transfer of a GlcNAc subunit on undecaprenyl-pyrophosphoryl-MurNAc-pentapeptide (lipid intermediate I) to form undecaprenyl-pyrophosphoryl-MurNAc- (pentapeptide)GlcNAc (lipid intermediate II) K02563 - 2.4.1.227 0.0000000000000000000000000000000000000000000000000000000000000000001442 235.0
DYD2_k127_4020518_0 PFAM Major Facilitator Superfamily K02429 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002524 437.0
DYD2_k127_4028086_0 PFAM Family of - - - 7.394e-220 714.0
DYD2_k127_403220_0 PFAM Glycosyl transferases group 1 - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000004496 259.0
DYD2_k127_403220_1 Catalyzes the reversible conversion of 3- phosphohydroxypyruvate to phosphoserine and of 3-hydroxy-2-oxo-4- phosphonooxybutanoate to phosphohydroxythreonine K00831 - 2.6.1.52 0.00000000000000000000000000000000000000000000000000002683 193.0
DYD2_k127_403220_2 Catalyzes the reversible conversion of 3- phosphohydroxypyruvate to phosphoserine and of 3-hydroxy-2-oxo-4- phosphonooxybutanoate to phosphohydroxythreonine K00831 - 2.6.1.52 0.0000000000000000000000000000000000000000000001303 173.0
DYD2_k127_403220_3 PFAM MarC family integral membrane protein K05595 - - 0.000000000000000007193 83.0
DYD2_k127_4033537_0 Bacterial regulatory proteins, tetR family - - - 0.00000000000000000000000000000000000000000000000000000004079 200.0
DYD2_k127_4033537_1 membrane - - - 0.00000000000000000000000000000000000004677 147.0
DYD2_k127_4051618_0 penicillin-binding protein 1C K05367 - 2.4.1.129 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001968 370.0
DYD2_k127_4073792_0 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000001188 248.0
DYD2_k127_4073792_1 PDZ DHR GLGF domain protein - - - 0.000000000000000000000000000000000000000000000001389 181.0
DYD2_k127_4073792_2 TIGRFAM endoribonuclease L-PSP K09022 - 3.5.99.10 0.000000000000000000000000000000000000000000000006435 174.0
DYD2_k127_4073792_3 Pfam Polyketide cyclase dehydrase and lipid transport - - - 0.000000000000000000000000000000000000000000000888 169.0
DYD2_k127_4079209_0 Critical role in recombination and DNA repair. Helps process Holliday junction intermediates to mature products by catalyzing branch migration. Has a DNA unwinding activity characteristic of a DNA helicase with a 3'- to 5'- polarity. Unwinds branched duplex DNA (Y-DNA) K03655 - 3.6.4.12 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002578 359.0
DYD2_k127_4079209_1 TIGRFAM gliding motility-associated protein GldE - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002574 338.0
DYD2_k127_4079209_2 TIGRFAM gliding motility-associated lipoprotein GldD - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000001403 267.0
DYD2_k127_4088332_0 Belongs to the sodium neurotransmitter symporter (SNF) (TC 2.A.22) family K03308 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002578 587.0
DYD2_k127_4088332_1 Thioesterase domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006368 312.0
DYD2_k127_4088332_2 COG0457 FOG TPR repeat - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000002126 273.0
DYD2_k127_4107962_0 Belongs to the sodium solute symporter (SSF) (TC 2.A.21) family K03307 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009193 367.0
DYD2_k127_4107962_1 Peptidase family M20/M25/M40 - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004407 304.0
DYD2_k127_4107962_2 FR47-like protein - - - 0.0000000000000000000000000000000000000000000000000002046 188.0
DYD2_k127_41258_0 Beta-lactamase class C and other penicillin binding proteins - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001619 342.0
DYD2_k127_41258_1 - - - - 0.000000000000000000000000000000000000000000000000000000000000000000000497 243.0
DYD2_k127_4139960_0 Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family - - - 0.0 1046.0
DYD2_k127_4144277_0 Peptidase U62 modulator of DNA gyrase K03592 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000249 482.0
DYD2_k127_4144277_1 Peptidase U62 modulator of DNA gyrase K03568 - - 0.000000000000000000000000006401 109.0
DYD2_k127_414498_0 Transfers and isomerizes the ribose moiety from AdoMet to the 7-aminomethyl group of 7-deazaguanine (preQ1-tRNA) to give epoxyqueuosine (oQ-tRNA) K07568 - 2.4.99.17 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006581 453.0
DYD2_k127_414498_1 PFAM Mandelate racemase muconate lactonizing enzyme, C-terminal domain - - - 0.00000000000000000000000000000000000000000000003015 176.0
DYD2_k127_4148725_0 PFAM Phosphorylase superfamily K00757 - 2.4.2.3 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000001239 291.0
DYD2_k127_4148725_1 Belongs to the UPF0176 family K07146 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000002208 263.0
DYD2_k127_4155075_0 Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain K07658 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001815 378.0
DYD2_k127_4155075_1 PFAM Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase K07636 - 2.7.13.3 0.0000000000000000000000000000000000000000000000000000000000000000000000000002286 262.0
DYD2_k127_4155075_2 Protein of unknown function (DUF3108) - - - 0.0000000000000000000000000000000000000000000000000000000000000000001732 234.0
DYD2_k127_4158081_0 Belongs to the sodium solute symporter (SSF) (TC 2.A.21) family - - - 1.229e-281 876.0
DYD2_k127_4158081_1 Specifically methylates the N4 position of cytidine in position 1402 (C1402) of 16S rRNA K03438 - 2.1.1.199 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001912 485.0
DYD2_k127_4158081_2 Nicotinate-nucleotide adenylyltransferase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002407 470.0
DYD2_k127_4158081_3 The UvrABC repair system catalyzes the recognition and processing of DNA lesions. UvrA is an ATPase and a DNA-binding protein. A damage recognition complex composed of 2 UvrA and 2 UvrB subunits scans DNA for abnormalities. When the presence of a lesion has been verified by UvrB, the UvrA molecules dissociate K03701 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000006047 257.0
DYD2_k127_4158081_4 Glutamine cyclotransferase K00683 - 2.3.2.5 0.00000000000000000000000000000000000000000000000000000000000007909 221.0
DYD2_k127_4158081_5 Putative zincin peptidase - - - 0.000000000000000000000000000000000002292 145.0
DYD2_k127_4158451_0 oxidoreductase activity - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000108 398.0
DYD2_k127_4158451_1 TIGRFAM RNA polymerase sigma factor, sigma-70 family K03088 - - 0.00000000000000000000000000000000000000000000000000003898 192.0
DYD2_k127_4165592_0 COG3209 Rhs family protein - - - 0.000000000002846 79.0
DYD2_k127_4195375_0 Can catalyze the hydrolysis of ATP in the presence of single-stranded DNA, the ATP-dependent uptake of single-stranded DNA by duplex DNA, and the ATP-dependent hybridization of homologous single-stranded DNAs. It interacts with LexA causing its activation and leading to its autocatalytic cleavage K03553 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002347 397.0
DYD2_k127_4195375_1 Endoribonuclease L-PSP - - - 0.000000000000000000000000000000000000000000000000001604 184.0
DYD2_k127_4213097_0 TIGRFAM proton-translocating NADH-quinone oxidoreductase, chain M K00342 - 1.6.5.3 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005519 494.0
DYD2_k127_4225242_0 TPM domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000979 331.0
DYD2_k127_4225242_1 Dipeptidyl peptidase IV (DPP IV) N-terminal region K01278 - 3.4.14.5 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000294 317.0
DYD2_k127_4242483_0 helicase superfamily c-terminal domain K11927 - 3.6.4.13 0.00000000000000000000000000000008168 125.0
DYD2_k127_4242483_1 - - - - 0.000000000004174 72.0
DYD2_k127_4242483_2 COG5337 Spore coat assembly protein K06330 - - 0.00000008603 61.0
DYD2_k127_4245301_0 Iron dependent repressor, metal binding and dimerisation domain K03709 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000002384 257.0
DYD2_k127_4245301_1 PFAM Glycosyl transferases group 1 - - - 0.0000000000000000000000000007224 119.0
DYD2_k127_4247784_0 COG2204 Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains K02481 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006521 358.0
DYD2_k127_4247784_1 HAMP domain - - - 0.000000000000000000000000000000000000000000000000000000000000002418 235.0
DYD2_k127_4252941_0 Belongs to the D-alanine--D-alanine ligase family K01921 - 6.3.2.4 4.12e-230 722.0
DYD2_k127_4252941_1 PFAM Pregnancy-associated plasma protein-A - - - 0.00000000000000000000004844 103.0
DYD2_k127_4272530_0 NQR complex catalyzes the reduction of ubiquinone-1 to ubiquinol by two successive reactions, coupled with the transport of Na( ) ions from the cytoplasm to the periplasm. NqrA to NqrE are probably involved in the second step, the conversion of ubisemiquinone to ubiquinol K00346 - 1.6.5.8 1.032e-200 633.0
DYD2_k127_4272530_1 NQR complex catalyzes the reduction of ubiquinone-1 to ubiquinol by two successive reactions, coupled with the transport of Na( ) ions from the cytoplasm to the periplasm. NqrA to NqrE are probably involved in the second step, the conversion of ubisemiquinone to ubiquinol K00347 - 1.6.5.8 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005016 395.0
DYD2_k127_4272530_2 Catalyzes the conversion of 1-hydroxy-2-methyl-2-(E)- butenyl 4-diphosphate (HMBPP) into a mixture of isopentenyl diphosphate (IPP) and dimethylallyl diphosphate (DMAPP). Acts in the terminal step of the DOXP MEP pathway for isoprenoid precursor biosynthesis K03527 - 1.17.7.4 0.000000000000000000000000000000000000000000000000000000000000000000000000000005441 264.0
DYD2_k127_4278168_0 DNA polymerase III alpha subunit K02337 - 2.7.7.7 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001195 416.0
DYD2_k127_4290063_0 peptidase C14 caspase catalytic subunit p20 - - - 0.0000000000000000000000000000000002937 142.0
DYD2_k127_4314578_0 fumarylacetoacetate (FAA) hydrolase K01555 - 3.7.1.2 7.022e-201 632.0
DYD2_k127_4314578_1 HEPN domain - - - 0.000000000000000000000000006265 115.0
DYD2_k127_4314578_2 Nucleotidyltransferase domain - - - 0.000000000000000003183 87.0
DYD2_k127_4314578_3 Flavin reductase - - - 0.000000008204 57.0
DYD2_k127_4331665_0 Protein of unknown function (DUF2851) - - - 0.0000000000000000000000000000000000000000000000000000001764 199.0
DYD2_k127_4331665_1 - - - - 0.00000000000000000000000000001848 128.0
DYD2_k127_4358736_0 PFAM TonB-dependent Receptor - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006852 444.0
DYD2_k127_4361551_0 Catalyzes the synthesis of 5,6-dihydrouridine (D), a modified base found in the D-loop of most tRNAs, via the reduction of the C5-C6 double bond in target uridines - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008206 566.0
DYD2_k127_4361551_1 PFAM Glycosyl transferases group 1 - - - 0.0000000000000000000000000000000000000000000001834 170.0
DYD2_k127_4361551_2 PFAM CAAX amino terminal protease family K07052 - - 0.000000000000000000000000000000002314 136.0
DYD2_k127_4367700_0 A type II topoisomerase that negatively supercoils closed circular double-stranded (ds) DNA in an ATP-dependent manner to modulate DNA topology and maintain chromosomes in an underwound state. Negative supercoiling favors strand separation, and DNA replication, transcription, recombination and repair, all of which involve strand separation. Also able to catalyze the interconversion of other topological isomers of dsDNA rings, including catenanes and knotted rings. Type II topoisomerases break and join 2 DNA strands simultaneously in an ATP-dependent manner K02469 - 5.99.1.3 4.155e-217 679.0
DYD2_k127_4367700_1 Right handed beta helix region - - - 0.000000003913 58.0
DYD2_k127_4373954_0 Receptor - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000101 260.0
DYD2_k127_4373954_1 Lytic transglycosylase with a strong preference for naked glycan strands that lack stem peptides K03591 - - 0.00000000000000000000000000000000000003478 150.0
DYD2_k127_4373954_2 PFAM MotA TolQ ExbB proton channel K03561 - - 0.000000000000000000000001262 105.0
DYD2_k127_437544_0 Glycosyl transferase 4-like domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000103 291.0
DYD2_k127_437544_1 Protein of unknown function (DUF1572) - - - 0.00000000000000000000000000000000000000000000000000000000000000000000005201 245.0
DYD2_k127_437544_2 MepB protein - - - 0.00000000000000000000000001032 110.0
DYD2_k127_438674_0 TIGRFAM capsular exopolysaccharide family - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004921 324.0
DYD2_k127_438674_1 Polysaccharide biosynthesis/export protein K01991 - - 0.000000000000000000000000000000000004632 140.0
DYD2_k127_4390766_0 Protein of unknown function (DUF2911) - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000001006 258.0
DYD2_k127_4390766_1 Belongs to the DNA glycosylase MPG family K03652 - 3.2.2.21 0.00000000000000000000000000000000000000000000000000000000000006878 219.0
DYD2_k127_4390766_2 Universal stress protein family - - - 0.000000000000000000000000000000000000003042 153.0
DYD2_k127_4405320_0 Asparagine synthase K01953 - 6.3.5.4 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002098 415.0
DYD2_k127_4405320_1 Glycosyl transferase 4-like domain - - - 0.000000000000000000000000000000000000000000000000006524 183.0
DYD2_k127_4411871_0 Molecular chaperone. Has ATPase activity K04079 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000735 587.0
DYD2_k127_4411871_1 Domain present in phytochromes and cGMP-specific phosphodiesterases. K03406 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000002625 260.0
DYD2_k127_4415092_0 Belongs to the AlaDH PNT family K00259 - 1.4.1.1 1.155e-205 645.0
DYD2_k127_4415710_0 Outer membrane efflux protein - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000008602 287.0
DYD2_k127_4415710_1 DEAD-like helicases superfamily - - - 0.0000000000000000000000000000000000000000000003495 167.0
DYD2_k127_442132_0 TonB-dependent receptor plug - - - 2.419e-279 878.0
DYD2_k127_442132_1 Outer membrane protein beta-barrel domain - - - 0.000000000000000000000000000000000000000000000001684 180.0
DYD2_k127_442132_2 Gliding motility protein, GldB - - - 0.00000000000000000000000000000000000000002339 159.0
DYD2_k127_4452670_0 Nitroreductase family - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000372 253.0
DYD2_k127_4452670_1 - - - - 0.000000000002599 79.0
DYD2_k127_4453680_0 FAD binding domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004793 370.0
DYD2_k127_4465158_0 PFAM Zinc carboxypeptidase - - - 0.00000000000000000000000000000000000000000000000000000000000006243 218.0
DYD2_k127_4465158_1 - - - - 0.00000000000000000000000000002085 124.0
DYD2_k127_4465158_2 Psort location CytoplasmicMembrane, score - - - 0.00000000001357 69.0
DYD2_k127_4472147_0 ABC-2 type transporter - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002971 554.0
DYD2_k127_4473106_0 Is required not only for elongation of protein synthesis but also for the initiation of all mRNA translation through initiator tRNA(fMet) aminoacylation K01874 GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006082,GO:0006139,GO:0006399,GO:0006412,GO:0006418,GO:0006518,GO:0006520,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0016070,GO:0019538,GO:0019752,GO:0034641,GO:0034645,GO:0034660,GO:0043038,GO:0043039,GO:0043043,GO:0043170,GO:0043436,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044281,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0071704,GO:0090304,GO:1901360,GO:1901564,GO:1901566,GO:1901576 6.1.1.10 1.075e-298 931.0
DYD2_k127_4473106_1 Psort location OuterMembrane, score - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008391 356.0
DYD2_k127_4473106_2 Helix-hairpin-helix motif - - - 0.0000000000000000000000000000000002754 143.0
DYD2_k127_4473106_3 GHKL domain - - - 0.000000002875 59.0
DYD2_k127_4490926_0 photoreceptor activity - - - 0.0000000000000000000000000000000000000000000000000008068 196.0
DYD2_k127_4490926_1 Forms oxaloacetate, a four-carbon dicarboxylic acid source for the tricarboxylic acid cycle K01595 - 4.1.1.31 0.00000000000000000000000000000000000000000000000000399 185.0
DYD2_k127_4490926_2 Domain of unknown function (DUF4154) - - - 0.0000000000000000001464 89.0
DYD2_k127_4490926_3 Domain of unknown function (DUF4154) - - - 0.000000000000000001287 89.0
DYD2_k127_4492930_0 Catalyzes the attachment of alanine to tRNA(Ala) in a two-step reaction alanine is first activated by ATP to form Ala- AMP and then transferred to the acceptor end of tRNA(Ala). Also edits incorrectly charged Ser-tRNA(Ala) and Gly-tRNA(Ala) via its editing domain K01872 GO:0003674,GO:0003824,GO:0004812,GO:0004813,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006082,GO:0006139,GO:0006396,GO:0006399,GO:0006400,GO:0006412,GO:0006418,GO:0006419,GO:0006518,GO:0006520,GO:0006725,GO:0006807,GO:0008033,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009451,GO:0009987,GO:0010467,GO:0016070,GO:0016597,GO:0016874,GO:0016875,GO:0019538,GO:0019752,GO:0031406,GO:0034470,GO:0034641,GO:0034645,GO:0034660,GO:0036094,GO:0043038,GO:0043039,GO:0043043,GO:0043167,GO:0043168,GO:0043170,GO:0043177,GO:0043412,GO:0043436,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044281,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0071704,GO:0090304,GO:0140098,GO:0140101,GO:1901360,GO:1901564,GO:1901566,GO:1901576 6.1.1.7 1.238e-208 655.0
DYD2_k127_4498203_0 ABC 3 transport family K11709 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000203 378.0
DYD2_k127_4498203_1 - - - - 0.0000000000000000000000000000000000000000000000000000000000000000000007914 237.0
DYD2_k127_450608_0 Catalyzes the hydrolysis of UDP-3-O-myristoyl-N- acetylglucosamine to form UDP-3-O-myristoylglucosamine and acetate, the committed step in lipid A biosynthesis K16363 - 3.5.1.108,4.2.1.59 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005619 450.0
DYD2_k127_450608_1 Involved in the biosynthesis of lipid A, a phosphorylated glycolipid that anchors the lipopolysaccharide to the outer membrane of the cell K00677 - 2.3.1.129 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004808 404.0
DYD2_k127_450608_2 PFAM ABC transporter K02193 - 3.6.3.41 0.000000000000000000000000000000000000000000000000000000000000005009 222.0
DYD2_k127_4509860_0 PFAM Proline dehydrogenase K00318 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004773 385.0
DYD2_k127_4511467_0 AraC family - - - 0.0000000000000000000000000001248 128.0
DYD2_k127_4516023_0 Catalyzes the condensation of 2 ATP molecules into cyclic di-AMP (c-di-AMP), a second messenger used to regulate differing processes in different bacteria - - - 0.0000000000000000000000000000003169 124.0
DYD2_k127_4516023_1 DoxX - - - 0.00000000000000000000002427 103.0
DYD2_k127_4535637_0 Domain of unknown function (DUF4386) - - - 0.0000000000000000000000000000003384 125.0
DYD2_k127_4535637_1 Endonuclease/Exonuclease/phosphatase family - - - 0.00000000000000000000005296 105.0
DYD2_k127_4548188_0 3'-5' exoribonuclease that releases 5'-nucleoside monophosphates and is involved in maturation of structured RNAs K12573,K12585 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009316 545.0
DYD2_k127_4548188_1 Belongs to the FPP GGPP synthase family K13789 - 2.5.1.1,2.5.1.10,2.5.1.29 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003665 417.0
DYD2_k127_4559626_0 Protein conserved in bacteria - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001033 518.0
DYD2_k127_4564769_0 Belongs to the methyltransferase superfamily K07444 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007339 440.0
DYD2_k127_4564769_1 Esterase of the alpha-beta hydrolase superfamily - - - 0.00000000000000000004538 91.0
DYD2_k127_4564769_2 chaperone-mediated protein folding - - - 0.00008771 51.0
DYD2_k127_4577704_0 PFAM MgsA AAA ATPase C terminal K07478 - - 3.587e-206 647.0
DYD2_k127_4577704_1 Bacterial regulatory proteins, tetR family K16137 - - 0.00000000000000000000000001782 113.0
DYD2_k127_4578789_0 Arginyl-tRNA synthetase K01887 GO:0003674,GO:0003824,GO:0004812,GO:0004814,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006082,GO:0006139,GO:0006399,GO:0006412,GO:0006418,GO:0006420,GO:0006518,GO:0006520,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0016070,GO:0016874,GO:0016875,GO:0019538,GO:0019752,GO:0034641,GO:0034645,GO:0034660,GO:0043038,GO:0043039,GO:0043043,GO:0043170,GO:0043436,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044281,GO:0044424,GO:0044464,GO:0046483,GO:0071704,GO:0090304,GO:0140098,GO:0140101,GO:1901360,GO:1901564,GO:1901566,GO:1901576 6.1.1.19 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003082 334.0
DYD2_k127_4578789_1 - - - - 0.00002464 52.0
DYD2_k127_4580441_0 Dehydrogenase K00101,K15054 - 1.1.2.3,1.1.99.31 0.0000000000000000000000000000000000000000000000000000000000000000000005531 246.0
DYD2_k127_4580441_1 acetolactate synthase K01652 - 2.2.1.6 0.0000000000000000002959 88.0
DYD2_k127_4614755_0 Critical role in recombination and DNA repair. Helps process Holliday junction intermediates to mature products by catalyzing branch migration. Has a DNA unwinding activity characteristic of a DNA helicase with a 3'- to 5'- polarity. Unwinds branched duplex DNA (Y-DNA) K03655 - 3.6.4.12 1.047e-204 642.0
DYD2_k127_4614755_1 ABC-2 type transporter - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008534 520.0
DYD2_k127_4627644_0 Histidine kinase - - - 0.00000000000000000000000000000000005476 155.0
DYD2_k127_4628454_0 Type IIA topoisomerase (DNA gyrase topo II topoisomerase IV) B subunit K02622 - - 1.149e-267 829.0
DYD2_k127_4629320_0 Domain present in phytochromes and cGMP-specific phosphodiesterases. - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000009606 282.0
DYD2_k127_4647901_0 MacB-like periplasmic core domain K02004 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001769 374.0
DYD2_k127_4657045_0 Penicillin-binding protein, dimerisation domain K05515 - 3.4.16.4 0.00000000000000000000000000000000000000000000000000000000000000000000000000000001708 271.0
DYD2_k127_4657045_1 Belongs to the SEDS family K05837 - - 0.00000000000000000000000000000000000000000000000007124 182.0
DYD2_k127_4670810_0 PFAM Aminotransferase class I and II K14287 - 2.6.1.88 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000153 471.0
DYD2_k127_4670810_1 PFAM Nitrilase cyanide hydratase and apolipoprotein N-acyltransferase K13566 - 3.5.1.3 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000001161 295.0
DYD2_k127_4670810_2 Removes the formyl group from the N-terminal Met of newly synthesized proteins. Requires at least a dipeptide for an efficient rate of reaction. N-terminal L-methionine is a prerequisite for activity but the enzyme has broad specificity at other positions K01462 - 3.5.1.88 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000005378 279.0
DYD2_k127_4670810_3 Di-iron-containing protein involved in the repair of iron-sulfur clusters K07322 - - 0.000000000000000000000000000000000000000000000000000000000001541 213.0
DYD2_k127_4670810_4 Could be a nuclease involved in processing of the 5'-end of pre-16S rRNA K07447 GO:0000966,GO:0000967,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006139,GO:0006364,GO:0006396,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0009987,GO:0010467,GO:0016070,GO:0016072,GO:0022613,GO:0034470,GO:0034471,GO:0034641,GO:0034660,GO:0042254,GO:0043170,GO:0044085,GO:0044237,GO:0044238,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0071704,GO:0071840,GO:0090304,GO:1901360 - 0.00000000000000000000000000000000000000000000000000000336 193.0
DYD2_k127_4677673_0 Superfamily I DNA and RNA - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000003334 289.0
DYD2_k127_4679556_0 Converts 2C-methyl-D-erythritol 2,4-cyclodiphosphate (ME-2,4cPP) into 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate K03526 GO:0003674,GO:0003824,GO:0006081,GO:0006082,GO:0006090,GO:0006629,GO:0006644,GO:0006720,GO:0006793,GO:0006796,GO:0008150,GO:0008152,GO:0008299,GO:0008610,GO:0008654,GO:0009058,GO:0009240,GO:0009987,GO:0016491,GO:0016725,GO:0019288,GO:0019637,GO:0019682,GO:0019752,GO:0032787,GO:0043436,GO:0044237,GO:0044238,GO:0044249,GO:0044255,GO:0044281,GO:0046429,GO:0046490,GO:0052592,GO:0055114,GO:0071704,GO:0090407,GO:1901135,GO:1901576 1.17.7.1,1.17.7.3 8.409e-233 730.0
DYD2_k127_4679556_1 Belongs to the short-chain dehydrogenases reductases (SDR) family - - - 0.000000000000000000000000000000000000002238 147.0
DYD2_k127_4684970_0 Catalyzes the transfer of the phosphoribosyl group of 5- phosphorylribose-1-pyrophosphate (PRPP) to anthranilate to yield N-(5'-phosphoribosyl)-anthranilate (PRA) K00766,K13497 GO:0000162,GO:0003674,GO:0003824,GO:0004048,GO:0006082,GO:0006520,GO:0006568,GO:0006576,GO:0006586,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0008652,GO:0009058,GO:0009072,GO:0009073,GO:0009308,GO:0009309,GO:0009987,GO:0016053,GO:0016740,GO:0016757,GO:0016763,GO:0018130,GO:0019438,GO:0019752,GO:0034641,GO:0042401,GO:0042430,GO:0042435,GO:0043436,GO:0044106,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0044283,GO:0046219,GO:0046394,GO:0046483,GO:0071704,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576,GO:1901605,GO:1901607 2.4.2.18,4.1.3.27 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003419 379.0
DYD2_k127_4684970_1 TIGRFAM glutamine amidotransferase of anthranilate synthase K01658 - 4.1.3.27 0.000000000000000005509 84.0
DYD2_k127_4687165_0 7TMR-DISM extracellular 2 - - - 0.0000000000003384 76.0
DYD2_k127_4689861_0 CheB methylesterase K03412 - 3.1.1.61,3.5.1.44 0.0000000000000000000000000000000000000000000000000000000000000002726 227.0
DYD2_k127_4689861_1 cheY-homologous receiver domain - - - 0.000000000000000000000000000000000000000000000000000084 188.0
DYD2_k127_4689861_2 Deamidates glutamine residues to glutamate on methyl- accepting chemotaxis receptors (MCPs). CheD-mediated MCP deamidation is required for productive communication of the conformational signals of the chemoreceptors to the CheA kinase K03411 - 3.5.1.44 0.000000001856 61.0
DYD2_k127_4694288_0 Belongs to the type II topoisomerase GyrA ParC subunit family K02621 - - 8.287e-303 935.0
DYD2_k127_4695638_0 PFAM Radical SAM - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000574 438.0
DYD2_k127_4695638_1 ATPases associated with a variety of cellular activities - - - 0.00000000000000000000000000000000000000000000000000000000000000000002003 237.0
DYD2_k127_4704297_0 PFAM Peptidase M16 inactive domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005738 581.0
DYD2_k127_4704297_1 Destroys radicals which are normally produced within the cells and which are toxic to biological systems K04564 - 1.15.1.1 0.00000000000000001991 81.0
DYD2_k127_4704297_2 PFAM O-methyltransferase K00588 - 2.1.1.104 0.00000000000000002199 82.0
DYD2_k127_4707651_0 MORN repeat variant - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002268 344.0
DYD2_k127_4707651_1 Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family K00833 - 2.6.1.62 0.000000000000000000000000000000000000000000000000000000000000000000000000000000003878 274.0
DYD2_k127_4707651_2 Catalyzes a mechanistically unusual reaction, the ATP- dependent insertion of CO2 between the N7 and N8 nitrogen atoms of 7,8-diaminopelargonic acid (DAPA) to form an ureido ring K01935 - 6.3.3.3 0.000000000000000000000000000000000000000000000000000000000000000000003284 241.0
DYD2_k127_4728966_0 involved in the purines biosynthetic pathway. Catalyzes the ATP-dependent conversion of formylglycinamide ribonucleotide (FGAR) and glutamine to yield formylglycinamidine ribonucleotide (FGAM) and glutamate K01952 - 6.3.5.3 7.325e-272 843.0
DYD2_k127_4729663_0 PFAM (2R)-phospho-3-sulfolactate synthase ComA K08097 - 4.4.1.19 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002699 428.0
DYD2_k127_4729663_1 PFAM Tetratricopeptide repeat - - - 0.000000000000000000000000000000000000000000000000001354 185.0
DYD2_k127_4736983_0 PFAM Phosphorylase superfamily K00757 - 2.4.2.3 0.0000000000000000000000000000000000000000000000000000000000000000000007473 240.0
DYD2_k127_4736983_1 PFAM thioesterase superfamily - - - 0.000000000000000000000000000000000000000000000000000000000000000000002751 238.0
DYD2_k127_4748530_0 Histidine kinase - - - 0.00000000000000000000000000000000000000000000000000005481 209.0
DYD2_k127_4752985_0 response regulator, receiver K02477 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003674 338.0
DYD2_k127_4752985_1 Histidine kinase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000006908 293.0
DYD2_k127_4752985_2 Endonuclease Exonuclease phosphatase - - - 0.0007747 43.0
DYD2_k127_4766142_0 - - - - 1.175e-227 713.0
DYD2_k127_4766142_1 Superfamily I DNA and RNA - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004399 313.0
DYD2_k127_4766142_2 Superfamily I DNA and RNA - - - 0.00000000000000000000000000000000000000000000002093 173.0
DYD2_k127_4768037_0 Arginyl-tRNA synthetase K01887 GO:0003674,GO:0003824,GO:0004812,GO:0004814,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006082,GO:0006139,GO:0006399,GO:0006412,GO:0006418,GO:0006420,GO:0006518,GO:0006520,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0016070,GO:0016874,GO:0016875,GO:0019538,GO:0019752,GO:0034641,GO:0034645,GO:0034660,GO:0043038,GO:0043039,GO:0043043,GO:0043170,GO:0043436,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044281,GO:0044424,GO:0044464,GO:0046483,GO:0071704,GO:0090304,GO:0140098,GO:0140101,GO:1901360,GO:1901564,GO:1901566,GO:1901576 6.1.1.19 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001674 485.0
DYD2_k127_4769401_0 Endonuclease that is involved in the suppression of homologous recombination and may therefore have a key role in the control of bacterial genetic diversity K07456 - - 0.0000000000000000000000000000000003042 133.0
DYD2_k127_4769401_2 PFAM NAD dependent epimerase dehydratase family K07071 - - 0.000000001931 60.0
DYD2_k127_4774391_0 Glycosyl transferase 4-like - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000857 398.0
DYD2_k127_4774391_1 PFAM Bacterial sugar transferase K15915 - 2.7.8.36 0.00000000000000000000000000000000000000000000000000000000000000000000000000000001244 273.0
DYD2_k127_4774391_2 Polysaccharide deacetylase - - - 0.00000000000000105 77.0
DYD2_k127_4774697_0 Peptidase family M1 domain K01256 - 3.4.11.2 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006324 466.0
DYD2_k127_4774697_1 Elongation factor Tu C-terminal domain K02358 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003061 301.0
DYD2_k127_4774697_2 - - - - 0.000000000006926 68.0
DYD2_k127_4776298_0 Belongs to the enoyl-CoA hydratase isomerase family K01692,K01715 - 4.2.1.17 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009571 442.0
DYD2_k127_4776298_1 Low molecular weight phosphotyrosine protein phosphatase K01104 - 3.1.3.48 0.0000000000000000000000000000000000000000000004154 171.0
DYD2_k127_4776298_2 Plasmid stabilization system - - - 0.00000001305 58.0
DYD2_k127_4776298_3 Belongs to the aspartokinase family K00928 - 2.7.2.4 0.00000002314 57.0
DYD2_k127_4786341_0 PFAM PASTA domain K01921,K08884,K12132 - 2.7.11.1,6.3.2.4 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005087 306.0
DYD2_k127_4786341_1 - - - - 0.000000000000000000000000000000000000003104 156.0
DYD2_k127_4786341_2 Belongs to the D-alanine--D-alanine ligase family K01921 - 6.3.2.4 0.0000000000000000000000000006813 113.0
DYD2_k127_4786995_0 Belongs to the ompA family - - - 0.00000000000000000000000000000000000000000006134 171.0
DYD2_k127_4786995_1 helicase superfamily c-terminal domain K11927 - 3.6.4.13 0.0001754 45.0
DYD2_k127_4790191_0 Tetratricopeptide repeats - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001288 454.0
DYD2_k127_4798566_0 Peptidase, S9A B C family, catalytic domain protein - GO:0003674,GO:0003824,GO:0004177,GO:0005488,GO:0005515,GO:0005575,GO:0005623,GO:0006508,GO:0006518,GO:0006807,GO:0008150,GO:0008152,GO:0008233,GO:0008238,GO:0008239,GO:0009056,GO:0009987,GO:0016787,GO:0019538,GO:0033218,GO:0034641,GO:0042277,GO:0042597,GO:0042802,GO:0042803,GO:0043170,GO:0043171,GO:0043603,GO:0044237,GO:0044238,GO:0044248,GO:0044464,GO:0046983,GO:0070011,GO:0071704,GO:0140096,GO:1901564,GO:1901565,GO:1901575 - 0.000000000000000000000000000000000000000000000000000000001374 207.0
DYD2_k127_4798566_1 Domain of unknown function (DUF4154) - - - 0.00000000000000000000005409 101.0
DYD2_k127_4814094_0 Catalyzes the ferrous insertion into protoporphyrin IX K01772 - 4.99.1.1,4.99.1.9 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000278 487.0
DYD2_k127_4814094_1 CarboxypepD_reg-like domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000003144 278.0
DYD2_k127_4814094_2 Predicted membrane protein (DUF2214) K08983 - - 0.0000000000000000000000000000000000000000000000000000000000002184 214.0
DYD2_k127_4814094_3 YCII-related domain - - - 0.00000000000000000000000000000000000000000000000000000006388 199.0
DYD2_k127_4814094_4 - - - - 0.0000000000000000000000000000000004633 137.0
DYD2_k127_4820822_0 Caspase domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000001916 282.0
DYD2_k127_4820822_1 Protein of unknown function (DUF4199) - - - 0.000000000007915 72.0
DYD2_k127_4822972_0 prohibitin homologues - - - 0.00000000000000000000000000000000000000000000000000001258 194.0
DYD2_k127_4822972_1 Domain present in phytochromes and cGMP-specific phosphodiesterases. - - - 0.000000000000000000000000000003165 130.0
DYD2_k127_4828644_0 Motility related/secretion protein - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001035 524.0
DYD2_k127_4831605_0 Endonuclease that is involved in the suppression of homologous recombination and may therefore have a key role in the control of bacterial genetic diversity K07456 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002139 337.0
DYD2_k127_4831605_1 protein (some members contain a von Willebrand factor type A (vWA) domain) - - - 0.00000000000000000000000000003111 117.0
DYD2_k127_4831605_2 Domain of unknown function (DUF4296) - - - 0.0000000000000000000001198 101.0
DYD2_k127_4834089_0 phosphoserine phosphatase activity - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007303 413.0
DYD2_k127_483583_0 RQC K03654 - 3.6.4.12 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004076 302.0
DYD2_k127_483583_1 PFAM FAD dependent oxidoreductase K15736 - - 0.0000000000000000000000000000000000000000000000000005247 185.0
DYD2_k127_4841_0 PFAM UbiA prenyltransferase K03179 - 2.5.1.39 0.000000000000000000000000000000000000000000000000000000000000000003751 231.0
DYD2_k127_4841_1 Catalyzes the transfer of a formyl group from 10- formyltetrahydrofolate to 5-phospho-ribosyl-glycinamide (GAR), producing 5-phospho-ribosyl-N-formylglycinamide (FGAR) and tetrahydrofolate K11175 - 2.1.2.2 0.000000000000000000000000000000000000000000000000000001083 194.0
DYD2_k127_4842045_0 Involved in the restart of stalled replication forks. Recognizes and binds the arrested nascent DNA chain at stalled replication forks. It can open the DNA duplex, via its helicase activity, and promote assembly of the primosome and loading of the major replicative helicase DnaB onto DNA K04066 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002339 500.0
DYD2_k127_4842045_1 COGs COG1331 Highly conserved protein containing a thioredoxin domain K06888 - - 0.00000000000000005309 83.0
DYD2_k127_4842137_0 TonB dependent receptor K16087 - - 7.435e-195 634.0
DYD2_k127_4842137_1 HIT family hydrolase K02503 - - 0.00000000000000000000000000000000000000000000000000000000003077 207.0
DYD2_k127_4842137_2 Key enzyme in folate metabolism. Catalyzes an essential reaction for de novo glycine and purine synthesis, and for DNA precursor synthesis K00287 - 1.5.1.3 0.00000000000000000000000000000000000000000000000000000002051 201.0
DYD2_k127_4842137_3 Necessary for efficient RNA polymerase transcription elongation past template-encoded arresting sites. The arresting sites in DNA have the property of trapping a certain fraction of elongating RNA polymerases that pass through, resulting in locked ternary complexes. Cleavage of the nascent transcript by cleavage factors such as GreA or GreB allows the resumption of elongation from the new 3'terminus. GreA releases sequences of 2 to 3 nucleotides K03624 - - 0.0000000000000000000000000000000000000000000000000000001535 196.0
DYD2_k127_4842342_0 Required for accurate and efficient protein synthesis under certain stress conditions. May act as a fidelity factor of the translation reaction, by catalyzing a one-codon backward translocation of tRNAs on improperly translocated ribosomes. Back- translocation proceeds from a post-translocation (POST) complex to a pre-translocation (PRE) complex, thus giving elongation factor G a second chance to translocate the tRNAs correctly. Binds to ribosomes in a GTP-dependent manner K03596 - - 1.297e-247 769.0
DYD2_k127_4846442_0 that it carries out the mismatch recognition step. This protein has a weak ATPase activity K03555 GO:0003674,GO:0003676,GO:0003677,GO:0003684,GO:0003690,GO:0003824,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0006139,GO:0006259,GO:0006281,GO:0006298,GO:0006725,GO:0006807,GO:0006950,GO:0006974,GO:0008094,GO:0008150,GO:0008152,GO:0009987,GO:0016462,GO:0016787,GO:0016817,GO:0016818,GO:0016887,GO:0017111,GO:0030983,GO:0032300,GO:0032991,GO:0033554,GO:0034641,GO:0042623,GO:0043170,GO:0044237,GO:0044238,GO:0044260,GO:0044424,GO:0044464,GO:0046483,GO:0050896,GO:0051716,GO:0071704,GO:0090304,GO:0097159,GO:1901360,GO:1901363,GO:1990391 - 2.279e-263 818.0
DYD2_k127_4851024_0 Belongs to the helicase family. UvrD subfamily - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001883 398.0
DYD2_k127_4851636_0 TIGRFAM glutamine amidotransferase of anthranilate synthase or aminodeoxychorismate synthase K01658,K01664 - 2.6.1.85,4.1.3.27 0.000000000000000000000000000000000000000000000000000000000000000004418 230.0
DYD2_k127_4851636_1 alpha/beta hydrolase fold - - - 0.0000000000000000000000000000000000000000000000000000000000000001298 224.0
DYD2_k127_4851636_2 PFAM Yqey-like protein K09117 - - 0.0000000000000000000000000000000000000000000000000001304 189.0
DYD2_k127_4851636_3 PFAM Colicin V production protein K03558 - - 0.0000000000000000000000000000000000000000002261 164.0
DYD2_k127_4851636_4 Catalyzes the complicated ring closure reaction between the two acyclic compounds 1-deoxy-D-xylulose-5-phosphate (DXP) and 3-amino-2-oxopropyl phosphate (1-amino-acetone-3-phosphate or AAP) to form pyridoxine 5'-phosphate (PNP) and inorganic phosphate K03474 GO:0003674,GO:0003824,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006725,GO:0006766,GO:0006767,GO:0006807,GO:0008150,GO:0008152,GO:0008614,GO:0008615,GO:0009058,GO:0009110,GO:0009987,GO:0016740,GO:0016769,GO:0017144,GO:0018130,GO:0019438,GO:0033856,GO:0034641,GO:0042364,GO:0042816,GO:0042819,GO:0044237,GO:0044249,GO:0044271,GO:0044281,GO:0044283,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0051186,GO:0051188,GO:0071704,GO:0072524,GO:0072525,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576,GO:1901615,GO:1901617 2.6.99.2 0.0000000000000000001568 89.0
DYD2_k127_4861235_0 Provides the (R)-glutamate required for cell wall biosynthesis K01776 GO:0000270,GO:0003674,GO:0003824,GO:0006022,GO:0006023,GO:0006024,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009252,GO:0009273,GO:0009987,GO:0016853,GO:0016854,GO:0016855,GO:0030203,GO:0034645,GO:0036361,GO:0042546,GO:0043170,GO:0044036,GO:0044038,GO:0044085,GO:0044237,GO:0044249,GO:0044260,GO:0047661,GO:0070589,GO:0071554,GO:0071704,GO:0071840,GO:1901135,GO:1901137,GO:1901564,GO:1901566,GO:1901576 5.1.1.3 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000001222 294.0
DYD2_k127_4861235_1 Part of the outer membrane protein assembly complex, which is involved in assembly and insertion of beta-barrel proteins into the outer membrane - - - 0.000005687 57.0
DYD2_k127_4865110_0 Belongs to the glycosyl hydrolase 3 family K05349 - 3.2.1.21 2.909e-203 639.0
DYD2_k127_4865110_1 protein conserved in bacteria - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001166 304.0
DYD2_k127_4871719_0 Belongs to the glutathione peroxidase family K00432 - 1.11.1.9 0.0000000000000000000000000000000000000000000000000000000000000000001657 234.0
DYD2_k127_4871719_1 Belongs to the MenA family. Type 1 subfamily K02548 - 2.5.1.74 0.0000000000000000000000000000000000000000000000000000000000000002408 226.0
DYD2_k127_489123_0 PFAM Major Facilitator Superfamily - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001369 323.0
DYD2_k127_489123_1 PFAM YhhN-like protein - - - 0.0000000000000000000000000000000000000000003942 166.0
DYD2_k127_489123_2 Protein of unknown function (DUF3667) K01091 - 3.1.3.18 0.00000000000000000000001385 109.0
DYD2_k127_4897491_0 Pyridine nucleotide-disulphide oxidoreductase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008359 439.0
DYD2_k127_4897491_1 Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain - - - 0.00000000000000000000000000000000000000000000000000002117 196.0
DYD2_k127_4902127_0 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal K00648 - 2.3.1.180 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006282 427.0
DYD2_k127_4902127_1 Phosphate acyltransferases - - - 0.00000000000000000000000000000000000000008747 154.0
DYD2_k127_4902127_2 PFAM Diacylglycerol kinase, catalytic - - - 0.00000000000000006049 82.0
DYD2_k127_4909964_0 Specifically methylates position 2 of adenine 2503 in 23S rRNA and position 2 of adenine 37 in tRNAs K06941 GO:0000154,GO:0001510,GO:0003674,GO:0003824,GO:0006139,GO:0006364,GO:0006396,GO:0006399,GO:0006400,GO:0006725,GO:0006807,GO:0008033,GO:0008150,GO:0008152,GO:0008168,GO:0008173,GO:0008175,GO:0008649,GO:0008757,GO:0009451,GO:0009987,GO:0010467,GO:0016070,GO:0016072,GO:0016740,GO:0016741,GO:0022613,GO:0030488,GO:0031167,GO:0032259,GO:0034470,GO:0034641,GO:0034660,GO:0042254,GO:0043170,GO:0043412,GO:0043414,GO:0044085,GO:0044237,GO:0044238,GO:0044260,GO:0046483,GO:0070475,GO:0071704,GO:0071840,GO:0090304,GO:0140098,GO:0140101,GO:0140102,GO:1901360 2.1.1.192 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000404 515.0
DYD2_k127_4909964_1 PFAM Rhomboid family - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001491 332.0
DYD2_k127_4909964_2 Thioesterase-like superfamily K01075 - 3.1.2.23 0.000000000000000000000000002349 113.0
DYD2_k127_4909964_3 PFAM Rhomboid family K09650 - 3.4.21.105 0.000000000000000000007817 92.0
DYD2_k127_4910799_0 Belongs to the monovalent cation proton antiporter 2 (CPA2) transporter (TC 2.A.37) family K03455 - - 1.098e-276 865.0
DYD2_k127_4910799_1 Inward rectifier potassium channel K08715 - - 0.000000000955 61.0
DYD2_k127_4913025_0 Subtilase family - - - 0.00000000000000000000000000000000000000000009946 174.0
DYD2_k127_492434_0 Two component regulator propeller - - - 0.00000000000000000000000000000000000000000000000000001277 197.0
DYD2_k127_492434_1 Chorismate mutase prephenate dehydratase K14170 - 4.2.1.51,5.4.99.5 0.0000000000000000000006496 96.0
DYD2_k127_4928501_0 Histidine kinase - - - 0.0 1106.0
DYD2_k127_4928501_1 His Kinase A (phosphoacceptor) domain - - - 0.00000000000000000000000000007288 116.0
DYD2_k127_4932120_0 Phenylacetic acid catabolic protein K02611 - 1.14.13.149 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008242 385.0
DYD2_k127_4932120_1 Phenylacetate-CoA oxygenase K02612 - - 0.0000000000000000000000000000000000000000000000000000000000000000000007437 239.0
DYD2_k127_4932120_2 phenylacetate catabolic process K02610 - - 0.000000000003659 68.0
DYD2_k127_4933959_0 Outer membrane receptor for ferrienterochelin and colicins K16089 - - 4.01e-287 894.0
DYD2_k127_4933959_1 Catalyzes the anaerobic formation of alpha-ketobutyrate and ammonia from threonine in a two-step reaction. The first step involved a dehydration of threonine and a production of enamine intermediates (aminocrotonate), which tautomerizes to its imine form (iminobutyrate). Both intermediates are unstable and short- lived. The second step is the nonenzymatic hydrolysis of the enamine imine intermediates to form 2-ketobutyrate and free ammonia. In the low water environment of the cell, the second step is accelerated by RidA K01754 - 4.3.1.19 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004909 395.0
DYD2_k127_4933959_2 iron dependent repressor K03709 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000002748 284.0
DYD2_k127_4936607_0 ATPase, P-type (transporting), HAD superfamily, subfamily IC K01537 - 3.6.3.8 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002049 524.0
DYD2_k127_4937358_0 exonuclease of the beta-lactamase fold involved in RNA processing K07576 - - 0.0000000000000000000000000000000000000000000227 164.0
DYD2_k127_4939099_0 TIGRFAM succinate dehydrogenase or fumarate reductase, flavoprotein subunit K00239 - 1.3.5.1,1.3.5.4 5.484e-265 818.0
DYD2_k127_4941592_0 PFAM CobQ CobB MinD ParA nucleotide binding domain K03496 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000001305 273.0
DYD2_k127_4941592_1 - - - - 0.0000000000000000008079 87.0
DYD2_k127_4941592_2 PFAM Heavy metal transport detoxification protein K08364 - - 0.00000000009045 63.0
DYD2_k127_4941592_3 Putative tRNA binding domain K06878 GO:0000049,GO:0003674,GO:0003676,GO:0003723,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006082,GO:0006139,GO:0006399,GO:0006412,GO:0006418,GO:0006518,GO:0006520,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0016070,GO:0017101,GO:0017102,GO:0019538,GO:0019752,GO:0032991,GO:0034641,GO:0034645,GO:0034660,GO:0043038,GO:0043039,GO:0043043,GO:0043170,GO:0043436,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044281,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0071704,GO:0090304,GO:0097159,GO:1901360,GO:1901363,GO:1901564,GO:1901566,GO:1901576 - 0.000000002424 58.0
DYD2_k127_4941952_0 PFAM aminotransferase class V K04487 - 2.8.1.7 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004296 565.0
DYD2_k127_4941952_1 Phosphoglucomutase phosphomannomutase alpha beta alpha domain I K01840 - 5.4.2.8 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006256 355.0
DYD2_k127_4941952_2 Transposase IS200 like - - - 0.0000000000000000000000000000000002241 132.0
DYD2_k127_4941952_3 Transposase IS200 like - - - 0.0000000000000000000000000003317 114.0
DYD2_k127_4952829_0 Ferredoxin K04755 - - 0.000000000000000000000000000000000000001152 151.0
DYD2_k127_4952829_1 SPFH domain / Band 7 family - - - 0.000000000000005295 81.0
DYD2_k127_4952829_2 Ferredoxin--NADP reductase K00384 - 1.8.1.9 0.0000000000154 64.0
DYD2_k127_4957964_0 TonB dependent receptor - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002358 325.0
DYD2_k127_4957964_1 Starch-binding associating with outer membrane - - - 0.00000003341 56.0
DYD2_k127_4963273_0 Aldehyde dehydrogenase family K00128 - 1.2.1.3 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002616 421.0
DYD2_k127_4963273_1 Belongs to the aldehyde dehydrogenase family K00128 - 1.2.1.3 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002924 420.0
DYD2_k127_4963273_2 PDZ domain (Also known as DHR or GLGF) - - - 0.000000000000000000000000000006658 121.0
DYD2_k127_4963597_0 Tetratricopeptide repeat - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001146 359.0
DYD2_k127_4963597_1 PFAM Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase K07636 - 2.7.13.3 0.00000000000000000000000000000000000000000000000000000000000000000000000000000007674 283.0
DYD2_k127_4963597_2 serine-type endopeptidase activity K04771,K06399 - 3.4.21.107,3.4.21.116 0.00000000000000003784 93.0
DYD2_k127_497658_0 Peptidase family M28 - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009047 312.0
DYD2_k127_497658_1 PFAM TonB-dependent Receptor Plug Domain K02014 - - 0.00000000000000000000000000000000000000000000000000000003368 203.0
DYD2_k127_4980526_0 Catalyzes the 2-thiolation of uridine at the wobble position (U34) of tRNA, leading to the formation of s(2)U34 K00566 - 2.8.1.13 3.308e-204 638.0
DYD2_k127_4984905_0 PFAM FAD-dependent pyridine nucleotide-disulphide oxidoreductase K03885 - 1.6.99.3 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001132 435.0
DYD2_k127_4984905_1 amino acid K03294 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008995 323.0
DYD2_k127_4984965_0 Belongs to the GPI family K01810 - 5.3.1.9 2.682e-252 783.0
DYD2_k127_4984965_1 Phosphomannose isomerase type I K01809 - 5.3.1.8 0.00000000000000000000000000000000000000000000000000005501 189.0
DYD2_k127_4989704_0 Protein of unknown function (DUF2723) - - - 0.0 1233.0
DYD2_k127_4989704_1 COGs COG1668 ABC-type Na efflux pump permease component K01992 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000826 479.0
DYD2_k127_4989704_2 protein conserved in bacteria - - - 0.0000000000003062 70.0
DYD2_k127_4991606_0 Catalyzes the radical-mediated insertion of two sulfur atoms into the C-6 and C-8 positions of the octanoyl moiety bound to the lipoyl domains of lipoate-dependent enzymes, thereby converting the octanoylated domains into lipoylated derivatives K03644 - 2.8.1.8 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001352 541.0
DYD2_k127_4991606_1 - - - - 0.000000000000000000000000000000000000000000000000000000001165 208.0
DYD2_k127_4991606_2 TIGRFAM bacillithiol system protein YtxJ - - - 0.0000000000000000000000000000000000001505 144.0
DYD2_k127_4991606_3 PFAM Major Facilitator Superfamily K08156 - - 0.000000000000000002679 87.0
DYD2_k127_5000378_0 Gaf domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005626 385.0
DYD2_k127_5003962_0 Catalyzes the transfer of the enolpyruvyl moiety of phosphoenolpyruvate (PEP) to the 5-hydroxyl of shikimate-3- phosphate (S3P) to produce enolpyruvyl shikimate-3-phosphate and inorganic phosphate K00800 - 2.5.1.19 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001797 326.0
DYD2_k127_5003962_1 Protein of unknown function (DUF433) - - - 0.000000008694 59.0
DYD2_k127_5011984_0 Succinyl-CoA synthetase functions in the citric acid cycle (TCA), coupling the hydrolysis of succinyl-CoA to the synthesis of either ATP or GTP and thus represents the only step of substrate-level phosphorylation in the TCA. The beta subunit provides nucleotide specificity of the enzyme and binds the substrate succinate, while the binding sites for coenzyme A and phosphate are found in the alpha subunit K01903 - 6.2.1.5 3.697e-219 685.0
DYD2_k127_5011984_1 Part of the ABC transporter complex LolCDE involved in the translocation of lipoproteins, in an ATP-dependent manner K09810 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005956 306.0
DYD2_k127_5011984_2 COG2204 Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains K02481 - - 0.0000000000000000000000000000000000000000000000000000001165 200.0
DYD2_k127_5011984_3 long-chain fatty acid transport protein - - - 0.000000000000000008936 87.0
DYD2_k127_5019801_0 Catalyzes the conversion of acetate into acetyl-CoA (AcCoA), an essential intermediate at the junction of anabolic and catabolic pathways. AcsA undergoes a two-step reaction. In the first half reaction, AcsA combines acetate with ATP to form acetyl-adenylate (AcAMP) intermediate. In the second half reaction, it can then transfer the acetyl group from AcAMP to the sulfhydryl group of CoA, forming the product AcCoA K01895 - 6.2.1.1 3.835e-253 784.0
DYD2_k127_5019801_1 - - - - 0.000000000000000000000000000000000000000000000000000000001019 208.0
DYD2_k127_5019801_2 Catalyzes the conversion of acetate into acetyl-CoA (AcCoA), an essential intermediate at the junction of anabolic and catabolic pathways. AcsA undergoes a two-step reaction. In the first half reaction, AcsA combines acetate with ATP to form acetyl-adenylate (AcAMP) intermediate. In the second half reaction, it can then transfer the acetyl group from AcAMP to the sulfhydryl group of CoA, forming the product AcCoA K01895 - 6.2.1.1 0.000000000000000007569 83.0
DYD2_k127_5022730_0 Peptide chain release factor 2 directs the termination of translation in response to the peptide chain termination codons UGA and UAA K02836 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002366 493.0
DYD2_k127_5022730_1 Psort location Cytoplasmic, score K01933 - 6.3.3.1 0.0000000000000000000000000000000000000000000000000000000000000001689 222.0
DYD2_k127_5028104_0 Excises uracil residues from the DNA which can arise as a result of misincorporation of dUMP residues by DNA polymerase or due to deamination of cytosine K03648 GO:0003674,GO:0003824,GO:0004844,GO:0006139,GO:0006259,GO:0006281,GO:0006284,GO:0006285,GO:0006725,GO:0006807,GO:0006950,GO:0006974,GO:0008150,GO:0008152,GO:0009987,GO:0016787,GO:0016798,GO:0016799,GO:0019104,GO:0033554,GO:0034641,GO:0043170,GO:0044237,GO:0044238,GO:0044260,GO:0046483,GO:0050896,GO:0051716,GO:0071704,GO:0090304,GO:0097506,GO:0097510,GO:0140097,GO:1901360 3.2.2.27 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000009946 295.0
DYD2_k127_5028104_1 Thiopurine S-methyltransferase (TPMT) K00569 - 2.1.1.67 0.00000000000000000000000000000000000000000000000000000000000000000000000003243 254.0
DYD2_k127_5028104_2 Methyltransferase domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000477 231.0
DYD2_k127_5028104_3 protein affecting Mg2 Co2 transport K06195 - - 0.0000000000000000000000000000000000000000000000000000000000006853 211.0
DYD2_k127_5028482_0 Catalyzes the condensation reaction of fatty acid synthesis by the addition to an acyl acceptor of two carbons from malonyl-ACP K09458 - 2.3.1.179 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004522 549.0
DYD2_k127_5028482_1 response to abiotic stimulus K01011,K06867 - 2.8.1.1,2.8.1.2 0.0000000000000000001933 90.0
DYD2_k127_5028482_2 PFAM periplasmic binding protein - - - 0.00000001881 57.0
DYD2_k127_5032218_0 Enoyl-(Acyl carrier protein) reductase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000018 324.0
DYD2_k127_5032218_1 PFAM methyladenine glycosylase K01246 - 3.2.2.20 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000001046 296.0
DYD2_k127_5032218_2 - - - - 0.000000000000000000000000000000000003037 145.0
DYD2_k127_5032218_3 Kazal type serine protease inhibitors - - - 0.00000000000001774 74.0
DYD2_k127_5051443_0 epimerase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000002835 255.0
DYD2_k127_5051443_1 Universal stress protein - - - 0.000000000000000000000000000000000000000000000000000000000000000169 230.0
DYD2_k127_5053711_0 TIGRFAM RNA polymerase sigma factor, sigma-70 family K03088 - - 0.000000000000000000000000000000000000000000000000000000000000000000002464 241.0
DYD2_k127_5053711_1 - - - - 0.00002869 54.0
DYD2_k127_5060151_0 Catalyzes the reversible interconversion of isobutyryl- CoA and n-butyryl-CoA, using radical chemistry. Also exhibits GTPase activity, associated with its G-protein domain (MeaI) that functions as a chaperone that assists cofactor delivery and proper holo-enzyme assembly K11942 - 5.4.99.13 6.918e-258 803.0
DYD2_k127_5060151_1 Esterase of the alpha-beta hydrolase superfamily - - - 0.000000000001636 70.0
DYD2_k127_5062479_0 COGs COG0471 Di- and tricarboxylate transporter - - - 0.00000000000000000000000000000000000000000000000000000000000005438 224.0
DYD2_k127_5062479_1 COG2366 Protein related to penicillin acylase K01434 - 3.5.1.11 0.0000000000000000002886 91.0
DYD2_k127_5073885_0 PFAM Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007238 436.0
DYD2_k127_5081101_0 Outer membrane protein beta-barrel domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003454 432.0
DYD2_k127_5093_0 Outer membrane protein beta-barrel family - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001817 451.0
DYD2_k127_5093_1 His Kinase A (phosphoacceptor) domain K07636 - 2.7.13.3 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003645 416.0
DYD2_k127_5093_2 Transcriptional regulatory protein, C terminal - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004027 306.0
DYD2_k127_5093_3 Protein of unknown function (Porph_ging) - - - 0.0000000000000000000000000000000000000000000000000000000000000000000002649 248.0
DYD2_k127_5093_4 Uncharacterized protein conserved in bacteria (DUF2179) - - - 0.0000000000000000000000000000000000000000000000000000000000000001066 227.0
DYD2_k127_5093_5 metabolite transporter - - - 0.00000000000000006683 83.0
DYD2_k127_5101269_0 Belongs to the UDP-N-acetylglucosamine 2-epimerase family K01791 - 5.1.3.14 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009243 361.0
DYD2_k127_5101269_1 UDP binding domain K02472 - 1.1.1.336 0.0000000000000000000000000000000000000000000000000000000000000000004259 231.0
DYD2_k127_511108_0 DJ-1/PfpI family - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000004945 287.0
DYD2_k127_511108_1 phosphatidate phosphatase activity K19302 - 3.6.1.27 0.00000000003912 72.0
DYD2_k127_511341_0 Belongs to the short-chain dehydrogenases reductases (SDR) family - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008638 369.0
DYD2_k127_511341_1 PFAM phospholipase Carboxylesterase - - - 0.00000000000000000000000000000000000000000000000000000000000000005421 229.0
DYD2_k127_511341_2 Outer membrane protein beta-barrel domain - - - 0.000000000000000000000000000000000000000000000000002532 190.0
DYD2_k127_511341_3 - - - - 0.000000000000000004437 84.0
DYD2_k127_5120289_0 - - - - 0.0000000000000000000000000000000000000000000000000009092 188.0
DYD2_k127_5120289_1 Nudix hydrolase K03574 - 3.6.1.55 0.00000000000000000000000000000000000000002131 157.0
DYD2_k127_5120289_2 Secreted and surface protein containing fasciclin-like repeats - - - 0.00000001708 60.0
DYD2_k127_5121219_0 Rhomboid family - - - 0.000000000000000000000000000000000000000000000000000000000000007131 221.0
DYD2_k127_5121219_1 Belongs to the arginase family K01479,K12255 - 3.5.3.7,3.5.3.8 0.000000000000000000000000000000000000000000000000000000000002135 214.0
DYD2_k127_5121219_3 DinB superfamily - - - 0.0000000000000000000001867 102.0
DYD2_k127_51501_0 The glycine cleavage system catalyzes the degradation of glycine K00605 - 2.1.2.10 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001138 521.0
DYD2_k127_5155390_0 PFAM TonB-dependent Receptor Plug - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004328 450.0
DYD2_k127_5155390_1 tRNA synthetase class II core domain (G, H, P, S and T) K01892 - 6.1.1.21 0.00000000000000000000000000000000000000000000000000000000002202 209.0
DYD2_k127_5157057_0 monooxygenase activity - - - 0.00000000000000000000000000000000000000000000000000002461 191.0
DYD2_k127_5157057_1 Hydroxylase for synthesis of 2-methylthio-cis-ribozeatin in tRNA K06169 - - 0.0000000000000000000000000000000000000000000000000007318 185.0
DYD2_k127_5162911_0 S-layer homology domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000002033 258.0
DYD2_k127_5162911_1 COG1595 DNA-directed RNA polymerase specialized sigma subunit sigma24 homolog K03088 - - 0.000000000002097 72.0
DYD2_k127_5164106_0 PFAM Uncharacterised protein family (UPF0153) - - - 0.000000000000000000000000000000000000000000000000003569 187.0
DYD2_k127_5164909_0 ABC transporter - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001725 375.0
DYD2_k127_5164909_1 Outer membrane efflux protein - - - 0.000000000000000000000000000000000000000000000000000000000000000000001552 252.0
DYD2_k127_5164909_2 Leucyl aminopeptidase K19701 - 3.4.11.10,3.4.11.6 0.0002224 46.0
DYD2_k127_5173353_0 Glycosyl transferase family 2 K00786 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007022 430.0
DYD2_k127_5173353_1 lyase activity - - - 0.0000000000000000000000000000000000000007849 158.0
DYD2_k127_5173353_2 Glycosyl transferase family 2 K00786 - - 0.000000006051 59.0
DYD2_k127_5179767_0 TIGRFAM LAO AO transport system ATPase K07588 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000113 397.0
DYD2_k127_5179767_1 Cytochrome c, class I - - - 0.0000000000000000000000000000000002173 136.0
DYD2_k127_5179767_2 CHASE2 domain - - - 0.0000000000000000000000003117 107.0
DYD2_k127_5185852_0 PFAM Glycosyl transferase family 2 - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001161 349.0
DYD2_k127_5185852_1 PFAM acylneuraminate cytidylyltransferase K07257 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000035 262.0
DYD2_k127_5185852_2 O-acyltransferase activity - - - 0.0000000000000000000000000000000000000000000000000000000000000000006452 234.0
DYD2_k127_5185852_3 PFAM NAD dependent epimerase dehydratase family K01784,K02473 - 5.1.3.2,5.1.3.7 0.00000000000000002437 82.0
DYD2_k127_518811_0 PFAM FKBP-type peptidyl-prolyl cis-trans isomerase K01802,K03767,K03772 - 5.2.1.8 0.0000000000000000000000000000000000000000000000000001096 192.0
DYD2_k127_518811_1 FKBP-type peptidyl-prolyl cis-trans isomerase K03772 - 5.2.1.8 0.000000000000000000002367 103.0
DYD2_k127_5193555_0 Repeats in polycystic kidney disease 1 (PKD1) and other proteins - - - 0.000000000000000000000000000000000000000000000000000000000000000000003294 262.0
DYD2_k127_5198360_0 Belongs to the class-I aminoacyl-tRNA synthetase family K01883 GO:0000166,GO:0003674,GO:0003824,GO:0004812,GO:0004817,GO:0005488,GO:0005524,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006082,GO:0006139,GO:0006399,GO:0006412,GO:0006418,GO:0006423,GO:0006518,GO:0006520,GO:0006725,GO:0006807,GO:0008144,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0016070,GO:0016874,GO:0016875,GO:0017076,GO:0019538,GO:0019752,GO:0030554,GO:0032553,GO:0032555,GO:0032559,GO:0034641,GO:0034645,GO:0034660,GO:0035639,GO:0036094,GO:0043038,GO:0043039,GO:0043043,GO:0043167,GO:0043168,GO:0043170,GO:0043436,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044281,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0071704,GO:0090304,GO:0097159,GO:0097367,GO:0140098,GO:0140101,GO:1901265,GO:1901360,GO:1901363,GO:1901564,GO:1901566,GO:1901576 6.1.1.16 1.527e-211 667.0
DYD2_k127_5198360_1 MacB-like periplasmic core domain K02004 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002648 381.0
DYD2_k127_5198360_2 Required for maturation of 30S ribosomal subunits K09748 GO:0000028,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006412,GO:0006518,GO:0006807,GO:0006996,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0016043,GO:0019538,GO:0022607,GO:0022613,GO:0022618,GO:0034622,GO:0034641,GO:0034645,GO:0042254,GO:0042255,GO:0042274,GO:0043043,GO:0043170,GO:0043603,GO:0043604,GO:0043933,GO:0044085,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044424,GO:0044444,GO:0044464,GO:0065003,GO:0070925,GO:0071704,GO:0071826,GO:0071840,GO:1901564,GO:1901566,GO:1901576 - 0.0000000000000000000000000000000002256 137.0
DYD2_k127_5199570_0 permease K02004 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002687 453.0
DYD2_k127_5199570_1 ABC-type antimicrobial peptide transport system, permease component K02004 - - 0.0000000000000000000000000000000000000000000001803 174.0
DYD2_k127_5200163_0 Doxx family - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000009602 276.0
DYD2_k127_5200163_1 Protein of unknown function (DUF1684) K09164 - - 0.00000000000000000000000000000000000000000000000000000000000000000000008556 244.0
DYD2_k127_5200163_2 thiamine pyrophosphokinase K00949 - 2.7.6.2 0.0000000000000000000000009538 111.0
DYD2_k127_5200163_3 - - - - 0.00000000000000000000001391 106.0
DYD2_k127_5200163_4 - - - - 0.000000001943 65.0
DYD2_k127_5207099_0 Binds and transfers iron-sulfur (Fe-S) clusters to target apoproteins. Can hydrolyze ATP K03593 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004448 553.0
DYD2_k127_5207099_1 NifU domain protein - - - 0.000000000000000000000000000000000002522 139.0
DYD2_k127_5207099_2 PFAM Pregnancy-associated plasma protein-A - - - 0.0000000000000000000000000000001678 130.0
DYD2_k127_5216970_0 PFAM Tetratricopeptide repeat - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006364 344.0
DYD2_k127_5216970_1 PFAM NAD dependent epimerase dehydratase family K00091 - 1.1.1.219 0.000000000000135 73.0
DYD2_k127_5224899_0 Pseudouridine synthase K06177,K06180 - 5.4.99.23,5.4.99.28,5.4.99.29 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000006525 289.0
DYD2_k127_5224899_1 TonB dependent receptor - - - 0.0000000001038 65.0
DYD2_k127_5242522_0 NQR complex catalyzes the reduction of ubiquinone-1 to ubiquinol by two successive reactions, coupled with the transport of Na( ) ions from the cytoplasm to the periplasm. The first step is catalyzed by NqrF, which accepts electrons from NADH and reduces ubiquinone-1 to ubisemiquinone by a one-electron transfer pathway K00351 - 1.6.5.8 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004625 522.0
DYD2_k127_5242522_1 4Fe-4S single cluster domain - - - 0.0000000000000000000000006344 104.0
DYD2_k127_5242522_2 DEAD-like helicases superfamily - - - 0.0000004698 52.0
DYD2_k127_5262815_0 NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient. This subunit may bind ubiquinone K00337 - 1.6.5.3 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001417 521.0
DYD2_k127_5286460_0 protein related to plant photosystem II stability assembly factor - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001799 338.0
DYD2_k127_5286460_1 His Kinase A (phosphoacceptor) domain K11527 - 2.7.13.3 0.000000000000000000000000000000000000000000000000000000000000000002771 253.0
DYD2_k127_5292237_0 Glycosyl hydrolase family 20, catalytic domain K12373 - 3.2.1.52 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008378 497.0
DYD2_k127_5298308_0 An essential GTPase which binds GTP, GDP and possibly (p)ppGpp with moderate affinity, with high nucleotide exchange rates and a fairly low GTP hydrolysis rate. Plays a role in control of the cell cycle, stress response, ribosome biogenesis and in those bacteria that undergo differentiation, in morphogenesis control K03979 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002305 545.0
DYD2_k127_5298308_1 ATP binding to DnaK triggers the release of the substrate protein, thus completing the reaction cycle. Several rounds of ATP-dependent interactions between DnaJ, DnaK and GrpE are required for fully efficient folding. Also involved, together with DnaK and GrpE, in the DNA replication of plasmids through activation of initiation proteins K03686 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007788 449.0
DYD2_k127_5298308_2 Catalyzes the reversible transfer of the terminal phosphate group between ATP and AMP. Plays an important role in cellular energy homeostasis and in adenine nucleotide metabolism K00939 - 2.7.4.3 0.000000000000000000000000000000000000000000000000000000000004108 210.0
DYD2_k127_5298308_3 Participates actively in the response to hyperosmotic and heat shock by preventing the aggregation of stress-denatured proteins, in association with DnaK and GrpE. It is the nucleotide exchange factor for DnaK and may function as a thermosensor. Unfolded proteins bind initially to DnaJ K03687 GO:0000166,GO:0000774,GO:0003674,GO:0005488,GO:0005515,GO:0008150,GO:0017076,GO:0030234,GO:0030554,GO:0036094,GO:0050790,GO:0051082,GO:0060589,GO:0060590,GO:0065007,GO:0065009,GO:0097159,GO:0098772,GO:1901265,GO:1901363 - 0.00000000000000000000000000000000000000000000000000000000008688 209.0
DYD2_k127_5301211_0 Cupin domain - - - 0.00000000000000000000000000000000000000000000000000001958 194.0
DYD2_k127_5301211_1 - - - - 0.00000000000000000000000000000000000000000000004408 175.0
DYD2_k127_5301295_0 Prevents misfolding and promotes the refolding and proper assembly of unfolded polypeptides generated under stress conditions K04077 GO:0003674,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006457,GO:0006458,GO:0008150,GO:0009987,GO:0016465,GO:0032991,GO:0044183,GO:0044424,GO:0044444,GO:0044445,GO:0044464,GO:0051082,GO:0061077,GO:0101031,GO:1990220 - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001883 509.0
DYD2_k127_5303315_0 GH3 auxin-responsive promoter - - - 2.703e-197 623.0
DYD2_k127_5303315_1 Pyridoxal 5'-phosphate (PLP)-binding protein, which is involved in PLP homeostasis K06997 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000009493 284.0
DYD2_k127_5303315_2 Thioesterase superfamily - - - 0.000000000000000000000000000000000000000000000000000000000000002135 220.0
DYD2_k127_5303315_3 small membrane protein - - - 0.0000000000000000000000000000000000003887 143.0
DYD2_k127_5303315_4 Protein of unknown function (DUF1573) - - - 0.0000000000000000000000000000000002621 136.0
DYD2_k127_5306124_0 CarboxypepD_reg-like domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000002086 252.0
DYD2_k127_5306124_1 - - - - 0.00000000000000000000000002156 113.0
DYD2_k127_5306773_0 Belongs to the sodium solute symporter (SSF) (TC 2.A.21) family - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001033 462.0
DYD2_k127_5306773_1 DinB superfamily - - - 0.000000000000000000000000000000000000000001003 162.0
DYD2_k127_5312970_0 Saccharopine dehydrogenase K00290,K00293 - 1.5.1.10,1.5.1.7 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002419 350.0
DYD2_k127_5312970_1 Protein of unknown function (DUF2452) - - - 0.000000000000000000000000000000000000000000000003624 176.0
DYD2_k127_531645_0 NAD-dependent epimerase dehydratase K01784 - 5.1.3.2 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001604 415.0
DYD2_k127_531645_1 Methyltransferase type 11 - - - 0.000000000000000000000000000000000000000000000000001359 186.0
DYD2_k127_531645_2 transferase activity, transferring glycosyl groups K00721 - 2.4.1.83 0.00000000000000000001342 93.0
DYD2_k127_5326790_0 Tetrapolymerization of the monopyrrole PBG into the hydroxymethylbilane pre-uroporphyrinogen in several discrete steps K01749 - 2.5.1.61 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008674 301.0
DYD2_k127_5326790_1 NUMOD4 motif - - - 0.00000000000000000000002578 104.0
DYD2_k127_5335769_0 Cytochrome c - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000625 287.0
DYD2_k127_5335769_1 Cytochrome c - - - 0.00000000000000000000000000000000000000000000000000000000002398 210.0
DYD2_k127_5335769_2 Four repeated domains in the Fasciclin I family of proteins, present in many other contexts. - - - 0.0008381 44.0
DYD2_k127_5335817_0 This protein is one of the early assembly proteins of the 50S ribosomal subunit, although it is not seen to bind rRNA by itself. It is important during the early stages of 50S assembly K02871 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000004063 248.0
DYD2_k127_5335817_1 TIGRFAM pseudouridine synthase, RluA family K06179,K06180 - 5.4.99.23,5.4.99.24 0.00000000000000000000000000000000000000000000000000000000000001186 218.0
DYD2_k127_5335817_2 Belongs to the universal ribosomal protein uS9 family K02996 GO:0000462,GO:0003674,GO:0003676,GO:0003723,GO:0003735,GO:0005198,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0006139,GO:0006364,GO:0006396,GO:0006412,GO:0006518,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0015935,GO:0016070,GO:0016072,GO:0019538,GO:0022613,GO:0022626,GO:0022627,GO:0030490,GO:0032991,GO:0034470,GO:0034641,GO:0034645,GO:0034660,GO:0042254,GO:0042274,GO:0043043,GO:0043170,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043603,GO:0043604,GO:0044085,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:0046483,GO:0071704,GO:0071840,GO:0090304,GO:0097159,GO:1901360,GO:1901363,GO:1901564,GO:1901566,GO:1901576,GO:1990904 - 0.0000000000000000000000000000000000002838 141.0
DYD2_k127_533970_0 Phosphate starvation-inducible protein PhoH K06217 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003353 471.0
DYD2_k127_533970_1 Integrase core domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009947 440.0
DYD2_k127_533970_2 S-adenosyl-l-methionine hydroxide adenosyltransferase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000001521 282.0
DYD2_k127_533970_3 PFAM Acetyltransferase (GNAT) family - - - 0.000000000000000000000000000000000000000006581 158.0
DYD2_k127_533970_4 Antibiotic biosynthesis monooxygenase - - - 0.000000000000000000000000000000004042 130.0
DYD2_k127_533970_5 Transposase - - - 0.000000000000000000000006545 106.0
DYD2_k127_533970_6 alginic acid biosynthetic process - - - 0.00000001081 57.0
DYD2_k127_533970_7 - - - - 0.00000005622 55.0
DYD2_k127_5348108_0 PFAM 2Fe-2S iron-sulfur cluster binding domain K02613 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001629 422.0
DYD2_k127_5348108_1 Branched-chain amino acid aminotransferase 4-amino-4-deoxychorismate lyase K00826,K02619 - 2.6.1.42,4.1.3.38 0.000000000000000000000000000000000000000003276 163.0
DYD2_k127_5348108_2 PFAM peptidase M3A and M3B thimet oligopeptidase F K08602 - - 0.000000000000007081 75.0
DYD2_k127_535111_0 SPTR Peptidase S8 and S53 subtilisin kexin sedolisin - - - 0.00000000000000000000000001257 128.0
DYD2_k127_535111_1 PFAM peptidase S8 and S53 subtilisin kexin sedolisin - - - 0.0000007128 63.0
DYD2_k127_5355322_0 chemotaxis K00575 - 2.1.1.80 0.00000000000000000000000000000000000000000000008872 175.0
DYD2_k127_5355322_1 Domain present in phytochromes and cGMP-specific phosphodiesterases. - - - 0.000000001312 64.0
DYD2_k127_5367570_0 TIGRFAM delta-1-pyrroline-5-carboxylate dehydrogenase, group 1 K00294,K13821 - 1.2.1.88,1.5.5.2 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001657 299.0
DYD2_k127_5367570_1 Mn2 and Fe2 transporters of the NRAMP family - - - 0.00000000000000000000000000000000001477 140.0
DYD2_k127_5367570_2 - - - - 0.00000000002939 65.0
DYD2_k127_5385817_0 Cell division protein that is involved in the assembly of the Z ring. May serve as a membrane anchor for the Z ring K03590 - - 9.375e-232 722.0
DYD2_k127_5385817_1 Essential cell division protein that forms a contractile ring structure (Z ring) at the future cell division site. The regulation of the ring assembly controls the timing and the location of cell division. One of the functions of the FtsZ ring is to recruit other cell division proteins to the septum to produce a new cell wall between the dividing cells. Binds GTP and shows GTPase activity K03531 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004712 561.0
DYD2_k127_5385817_2 Cell division protein K03589 - - 0.00000000000000000000000000000000000000000199 158.0
DYD2_k127_5393337_0 Nuclease, EndA NucM family - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001556 323.0
DYD2_k127_5393337_1 endonuclease I - - - 0.000000000000000000000002957 112.0
DYD2_k127_5408652_0 PFAM 3-Deoxy-D-manno-octulosonic-acid transferase (kdotransferase) K02527 - 2.4.99.12,2.4.99.13,2.4.99.14,2.4.99.15 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004343 405.0
DYD2_k127_5408652_1 One of several proteins that assist in the late maturation steps of the functional core of the 30S ribosomal subunit. Helps release RbfA from mature subunits. May play a role in the assembly of ribosomal proteins into the subunit. Circularly permuted GTPase that catalyzes slow GTP hydrolysis, GTPase activity is stimulated by the 30S ribosomal subunit K06949 - 3.1.3.100 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005628 389.0
DYD2_k127_5427090_0 ThiF family K22132 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002594 323.0
DYD2_k127_5427090_1 PFAM Bacterial lipid A biosynthesis acyltransferase K02517 - 2.3.1.241 0.00000000000000000000000000000000000000000000000000000000000000002656 233.0
DYD2_k127_5427090_2 Belongs to the Fur family K03711 - - 0.000000000000000000000000000000000000000000000000001418 185.0
DYD2_k127_5427090_3 hydrolase, TatD K03424 - - 0.000000000000000000000000000000000000000002487 163.0
DYD2_k127_5427090_4 Domain of unknown function (DUF4154) - - - 0.00000000000000000005256 91.0
DYD2_k127_5428390_0 Alpha-2-Macroglobulin K06894 - - 0.0 1035.0
DYD2_k127_5438799_0 membrane K05794 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008516 310.0
DYD2_k127_5438799_1 Alpha-2-Macroglobulin K06894 - - 0.0000000000000000000000000000000000000002022 159.0
DYD2_k127_5440528_0 PFAM acylneuraminate cytidylyltransferase K07257 - - 0.00000000000000000000000000000000000000000000000000000000000000000000006882 243.0
DYD2_k127_5440528_1 PFAM acylneuraminate cytidylyltransferase K07257 - - 0.0000000000000000000000000000000000000000000000001229 185.0
DYD2_k127_5440528_2 Hexapeptide repeat of succinyl-transferase - - - 0.00000000000002294 73.0
DYD2_k127_5444644_0 Required for morphogenesis and for the elongation of the flagellar filament by facilitating polymerization of the flagellin monomers at the tip of growing filament. Forms a capping structure, which prevents flagellin subunits (transported through the central channel of the flagellum) from leaking out without polymerization at the distal end - - - 0.0000000000000000000000000000000002394 144.0
DYD2_k127_5444644_1 PFAM PKD domain - - - 0.0000000000002127 81.0
DYD2_k127_5446337_0 - - - - 0.00000000000000000000006027 108.0
DYD2_k127_5446337_1 PFAM Rhodanese-like domain - - - 0.0000000000000000001014 89.0
DYD2_k127_5452861_0 Acetyl-CoA carboxylase carboxyltransferase component (subunits alpha and beta) - - - 1.7e-214 670.0
DYD2_k127_5452861_1 Mammalian cell entry related domain protein K02067 - - 0.00000000000000000000000000325 115.0
DYD2_k127_5482721_0 - - - - 0.00000000000000000000000000000000000000000000000000000000000000003549 236.0
DYD2_k127_5482721_1 - - - - 0.0001164 46.0
DYD2_k127_5488654_0 ATPase family associated with various cellular activities (AAA) K03924 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000137 421.0
DYD2_k127_5497343_0 Involved in the final reduction of the elongation cycle of fatty acid synthesis (FAS II). Catalyzes the reduction of a carbon-carbon double bond in an enoyl moiety that is covalently linked to an acyl carrier protein (ACP) K00209 - 1.3.1.44,1.3.1.9 3.226e-211 659.0
DYD2_k127_5497343_1 Subtilase family - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000336 347.0
DYD2_k127_5497343_2 Endoribonuclease L-PSP K15067 - 3.5.99.5 0.000000000000000000000000000000000000000000000000000000000000000000000003533 245.0
DYD2_k127_5497343_3 Dual-action HEIGH metallo-peptidase - - - 0.000000000000000000000000000000000000000000000000000000000136 213.0
DYD2_k127_5497343_4 Subtilase family - - - 0.0000000000000000000000000000000000000000004056 167.0
DYD2_k127_5498573_0 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001168 457.0
DYD2_k127_5498573_1 Protein conserved in bacteria - - - 0.0000000000000000000107 97.0
DYD2_k127_5510235_0 CheY-like receiver AAA-type ATPase and DNA-binding domains - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003421 573.0
DYD2_k127_5510235_1 Acyl-protein synthetase, LuxE - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000001484 286.0
DYD2_k127_5510235_2 PFAM Smr - - - 0.000000000000000000000000000000000000000000000000005778 187.0
DYD2_k127_5510235_3 - - - - 0.00000000000000000000000000000000000000000000000001409 182.0
DYD2_k127_5512910_0 PFAM periplasmic binding protein K02016 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006988 372.0
DYD2_k127_5515477_0 PFAM Signal transduction histidine kinase, internal region - - - 0.00000000000000000000000000000000000000000000000802 194.0
DYD2_k127_5517582_0 Involved in peptide bond synthesis. Stimulates efficient translation and peptide-bond synthesis on native or reconstituted 70S ribosomes in vitro. Probably functions indirectly by altering the affinity of the ribosome for aminoacyl-tRNA, thus increasing their reactivity as acceptors for peptidyl transferase K02356 GO:0003674,GO:0003676,GO:0003723,GO:0003746,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006412,GO:0006414,GO:0006518,GO:0006807,GO:0008135,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0019538,GO:0034641,GO:0034645,GO:0043043,GO:0043170,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044424,GO:0044464,GO:0071704,GO:0097159,GO:1901363,GO:1901564,GO:1901566,GO:1901576 - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003075 299.0
DYD2_k127_5517582_1 Catalyzes the condensation reaction of fatty acid synthesis by the addition to an acyl acceptor of two carbons from malonyl-ACP. Catalyzes the first condensation reaction which initiates fatty acid synthesis and may therefore play a role in governing the total rate of fatty acid production. Possesses both acetoacetyl-ACP synthase and acetyl transacylase activities. Its substrate specificity determines the biosynthesis of branched- chain and or straight-chain of fatty acids K00648 GO:0003674,GO:0003824,GO:0006082,GO:0006629,GO:0006631,GO:0008150,GO:0008152,GO:0009987,GO:0016740,GO:0016746,GO:0016747,GO:0019752,GO:0032787,GO:0033818,GO:0043436,GO:0044237,GO:0044238,GO:0044255,GO:0044281,GO:0071704 2.3.1.180 0.000000000000002857 74.0
DYD2_k127_5517582_2 first, biotin carboxylase catalyzes the carboxylation of the carrier protein and then the transcarboxylase transfers the carboxyl group to form malonyl-CoA K02160 - - 0.00000000000001139 77.0
DYD2_k127_5518383_0 Sigma-70 region 2 - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000138 280.0
DYD2_k127_5518383_1 - - - - 0.00000000000000000000000000000002103 137.0
DYD2_k127_5518383_2 Belongs to the ABC-4 integral membrane protein family. FtsX subfamily K09811 GO:0005575,GO:0005618,GO:0005623,GO:0006928,GO:0008150,GO:0009274,GO:0009276,GO:0009605,GO:0009607,GO:0009615,GO:0009987,GO:0030312,GO:0030313,GO:0031975,GO:0040011,GO:0043207,GO:0044464,GO:0048870,GO:0050896,GO:0051179,GO:0051301,GO:0051674,GO:0051704,GO:0051707,GO:0071944,GO:0071976 - 0.000000000000000000000003229 104.0
DYD2_k127_5518383_3 Uncharacterized protein conserved in bacteria (DUF2147) - - - 0.00000003778 56.0
DYD2_k127_5523287_0 TIGRFAM 3-oxoacid CoA-transferase, B subunit K01029,K01032 - 2.8.3.5,2.8.3.6 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004167 388.0
DYD2_k127_5523287_1 Peptidase family M48 - - - 0.000000000000000000000001328 106.0
DYD2_k127_5523518_0 Belongs to the pirin family K06911 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002649 389.0
DYD2_k127_5523518_1 PFAM Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000001146 283.0
DYD2_k127_5527966_0 Involved in targeting and insertion of nascent membrane proteins into the cytoplasmic membrane. Acts as a receptor for the complex formed by the signal recognition particle (SRP) and the ribosome-nascent chain (RNC) K03110 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001007 525.0
DYD2_k127_5527966_1 Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family K00819 - 2.6.1.13 0.0000000000000000000000000000000000000000000004518 169.0
DYD2_k127_5527966_2 Belongs to the thioredoxin family K03671 - - 0.000000000000000000000000000000000000002075 148.0
DYD2_k127_5527966_3 Belongs to the bacterial ribosomal protein bL28 family K02902 GO:0003674,GO:0003735,GO:0005198,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0015934,GO:0022625,GO:0022626,GO:0032991,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:1990904 - 0.000000000000000000000000000000000001194 139.0
DYD2_k127_5527966_4 Belongs to the bacterial ribosomal protein bL33 family K02913 - - 0.0000000000000000000000000009355 112.0
DYD2_k127_5527966_5 Domain of unknown function (DUF4295) - - - 0.0000000000000003467 78.0
DYD2_k127_5548110_0 Conserved hypothetical protein (DUF2461) - - - 0.0000000000000000000000000000000000000000000000000000000008327 203.0
DYD2_k127_5548110_1 Protein of unknown function (DUF3995) - - - 0.000000000000000000000000000000000000001564 151.0
DYD2_k127_5562990_0 Provides the precursors necessary for DNA synthesis. Catalyzes the biosynthesis of deoxyribonucleotides from the corresponding ribonucleotides K00525 - 1.17.4.1 0.0 1321.0
DYD2_k127_556516_0 ROK family K00845 - 2.7.1.2 0.00000000000000000000000000000000000000000000000000000000000000000000000000000001215 276.0
DYD2_k127_556516_1 Belongs to the glycosyl hydrolase 31 family K01187 - 3.2.1.20 0.00000000000000000000000000009643 120.0
DYD2_k127_5576126_0 Belongs to the arginase family K01479 - 3.5.3.8 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004205 578.0
DYD2_k127_5576126_1 RDD family - - - 0.00000015 58.0
DYD2_k127_5577736_0 Cystathionine beta-synthase K01697 - 4.2.1.22 1.591e-221 691.0
DYD2_k127_5577736_1 Endonuclease that specifically degrades the RNA of RNA- DNA hybrids K03470 GO:0003674,GO:0003824,GO:0004518,GO:0004519,GO:0004521,GO:0004523,GO:0004540,GO:0005575,GO:0005622,GO:0005623,GO:0006139,GO:0006259,GO:0006260,GO:0006261,GO:0006271,GO:0006273,GO:0006281,GO:0006298,GO:0006401,GO:0006725,GO:0006807,GO:0006950,GO:0006974,GO:0008150,GO:0008152,GO:0009056,GO:0009057,GO:0009058,GO:0009059,GO:0009987,GO:0016070,GO:0016787,GO:0016788,GO:0016891,GO:0016893,GO:0019439,GO:0022616,GO:0032299,GO:0032991,GO:0033554,GO:0033567,GO:0034641,GO:0034645,GO:0034655,GO:0043137,GO:0043170,GO:0044237,GO:0044238,GO:0044248,GO:0044249,GO:0044260,GO:0044265,GO:0044270,GO:0044424,GO:0044464,GO:0046483,GO:0046700,GO:0050896,GO:0051716,GO:0071704,GO:0090304,GO:0090305,GO:0090501,GO:0090502,GO:0140098,GO:1901360,GO:1901361,GO:1901575,GO:1901576 3.1.26.4 0.00000000000000000005198 90.0
DYD2_k127_5583819_0 Helix-turn-helix domain - - - 0.0004474 52.0
DYD2_k127_5585267_0 Outer membrane protein protective antigen OMA87 - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000002059 313.0
DYD2_k127_5587059_0 ABC 3 transport family K11708 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001822 391.0
DYD2_k127_5587059_1 Key enzyme in the regulation of glycerol uptake and metabolism. Catalyzes the phosphorylation of glycerol to yield sn- glycerol 3-phosphate K00864 - 2.7.1.30 0.000000000000000000000000000000000000000000000000000000000000000000000107 242.0
DYD2_k127_5593779_0 DNA segregation ATPase FtsK SpoIIIE K03466 - - 1.264e-315 982.0
DYD2_k127_5593779_1 PFAM Outer membrane lipoprotein carrier protein LolA K03634 - - 0.0000000000000000000000000000000000000000000000000000000002656 208.0
DYD2_k127_559565_0 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009334 489.0
DYD2_k127_559565_1 Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain K07665 - - 0.000000000000000000000000001285 112.0
DYD2_k127_559565_2 FtsZ-dependent cytokinesis K09892,K13924 GO:0000003,GO:0000910,GO:0003674,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0007049,GO:0008150,GO:0009987,GO:0019954,GO:0022402,GO:0022414,GO:0032153,GO:0032505,GO:0042802,GO:0043093,GO:0044424,GO:0044444,GO:0044464,GO:0051301 2.1.1.80,3.1.1.61 0.00000000000000000004451 101.0
DYD2_k127_559565_3 S1 P1 nuclease - - - 0.000000002744 61.0
DYD2_k127_5595837_0 Member of the two-component regulatory system DegS DegU, which plays an important role in the transition growth phase K07683,K07777 - 2.7.13.3 0.0000000000000000000000000000000000000000005181 169.0
DYD2_k127_5600625_0 Belongs to the peptidase M24B family K01262 - 3.4.11.9 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002326 535.0
DYD2_k127_5600625_1 - - - - 0.000005076 51.0
DYD2_k127_5609633_0 membrane protein (DUF2154) - - - 0.000000000000000000000000000000000000000000000000000000000000008185 225.0
DYD2_k127_5609633_1 - - - - 0.000000000000000000001111 95.0
DYD2_k127_5609633_2 Domain of unknown function (DUF4288) - - - 0.00000000000004205 77.0
DYD2_k127_5609633_3 Histidine kinase - - - 0.0002146 48.0
DYD2_k127_5611797_0 Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family K00821 - 2.6.1.11,2.6.1.17 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006292 438.0
DYD2_k127_5611797_1 Catalyzes the NADPH-dependent reduction of N-acetyl-5- glutamyl phosphate to yield N-acetyl-L-glutamate 5-semialdehyde K00145 - 1.2.1.38 0.00000000000000001788 82.0
DYD2_k127_5615744_0 Belongs to the anaerobic coproporphyrinogen-III oxidase family - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001155 475.0
DYD2_k127_5615744_1 Transcriptional regulator, Crp Fnr family K01420 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001848 346.0
DYD2_k127_5615744_2 PFAM Tetrapyrrole (Corrin Porphyrin) Methylases K07056 - 2.1.1.198 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000002389 288.0
DYD2_k127_5615744_3 mercury ion transmembrane transporter activity K01533,K17686 GO:0003674,GO:0003824,GO:0005215,GO:0005388,GO:0005575,GO:0005622,GO:0005623,GO:0005886,GO:0005887,GO:0006810,GO:0006811,GO:0006812,GO:0006816,GO:0008150,GO:0008324,GO:0015075,GO:0015085,GO:0015318,GO:0015399,GO:0015405,GO:0015662,GO:0016020,GO:0016021,GO:0016462,GO:0016787,GO:0016817,GO:0016818,GO:0016887,GO:0017111,GO:0019829,GO:0022804,GO:0022853,GO:0022857,GO:0022890,GO:0030001,GO:0031224,GO:0031226,GO:0034220,GO:0042623,GO:0042625,GO:0042626,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0043492,GO:0044424,GO:0044425,GO:0044459,GO:0044464,GO:0046873,GO:0051179,GO:0051234,GO:0055085,GO:0070588,GO:0070838,GO:0071944,GO:0072511,GO:0090662,GO:0098655,GO:0098660,GO:0098662,GO:0099131,GO:0099132 3.6.3.4,3.6.3.54 0.00000000000000000000000000000000000000000000000000000000000000000000000000201 259.0
DYD2_k127_5620973_0 Cell wall formation K00075 - 1.3.1.98 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003721 416.0
DYD2_k127_5620973_1 COG COG0457 FOG TPR repeat - - - 0.0001499 45.0
DYD2_k127_5637843_0 Tetratricopeptide repeat - - - 0.000000000000000000000000000008318 128.0
DYD2_k127_5638842_0 PFAM Sodium alanine symporter family K03310 - - 1.491e-195 619.0
DYD2_k127_5638842_1 HEAT domain containing protein - - - 0.00000000000000000000000000000000000000000000000000000000000000000000004731 243.0
DYD2_k127_5638842_2 Catalyzes the deamination of adenosine to inosine at the wobble position 34 of tRNA(Arg2) K11991 - 3.5.4.33 0.00000000000000000000000000000000000000000000000000000000000001949 218.0
DYD2_k127_5638842_3 Belongs to the ompA family K03640 - - 0.0000000000000000000000000000000000000000008422 159.0
DYD2_k127_5638842_4 - - - - 0.000000000000000000000000000002233 126.0
DYD2_k127_5638842_5 - - - - 0.0000000000000000000000002603 115.0
DYD2_k127_5663262_0 Belongs to the metal hydrolase YfiT family - - - 0.0000000000000000000000000000000000000000000000000000000000006985 215.0
DYD2_k127_5663262_1 PAS fold - - - 0.000000000000000000000000000000000000000000000000000000000004164 216.0
DYD2_k127_5663262_2 Putative cyclase - - - 0.00000000000000000000000000000000000000000004684 163.0
DYD2_k127_5668326_0 transcriptional regulator - - - 0.000000000000000000000000000000000000000000000000000000002982 205.0
DYD2_k127_5668326_1 Rhodanese Homology Domain - - - 0.0000000000000000000000000000000000000000008965 158.0
DYD2_k127_5668326_2 Alpha/beta hydrolase family - - - 0.00000000000000001249 85.0
DYD2_k127_5672532_0 PFAM Aminotransferase class I and II K00812 - 2.6.1.1 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002069 446.0
DYD2_k127_5672532_1 pfkB family carbohydrate kinase K03272 - 2.7.1.167,2.7.7.70 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000399 397.0
DYD2_k127_5699645_0 PFAM Glyoxalase bleomycin resistance protein dioxygenase K00457 - 1.13.11.27 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003191 490.0
DYD2_k127_5699645_1 PFAM Aminotransferase class I and II K00639,K00652 - 2.3.1.29,2.3.1.47 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008493 379.0
DYD2_k127_5699645_2 - - - - 0.00000000000000000000000000000000000000000000001405 174.0
DYD2_k127_5699645_3 Outer membrane protein beta-barrel domain - - - 0.000000000000000000000000000000000000002711 153.0
DYD2_k127_5730779_0 Domain present in phytochromes and cGMP-specific phosphodiesterases. - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008998 526.0
DYD2_k127_5741486_0 Catalyzes the anti-1,4-elimination of the C-3 phosphate and the C-6 proR hydrogen from 5-enolpyruvylshikimate-3-phosphate (EPSP) to yield chorismate, which is the branch point compound that serves as the starting substrate for the three terminal pathways of aromatic amino acid biosynthesis. This reaction introduces a second double bond into the aromatic ring system K01736 GO:0000166,GO:0003674,GO:0003824,GO:0004107,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006082,GO:0006520,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0008652,GO:0009058,GO:0009072,GO:0009073,GO:0009423,GO:0009987,GO:0010181,GO:0016053,GO:0016829,GO:0016835,GO:0016838,GO:0019438,GO:0019752,GO:0032553,GO:0036094,GO:0043167,GO:0043168,GO:0043436,GO:0043648,GO:0043650,GO:0044237,GO:0044238,GO:0044249,GO:0044281,GO:0044283,GO:0044424,GO:0044444,GO:0044464,GO:0046394,GO:0046417,GO:0048037,GO:0050662,GO:0071704,GO:0097159,GO:0097367,GO:1901265,GO:1901360,GO:1901362,GO:1901363,GO:1901564,GO:1901566,GO:1901576 4.2.3.5 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006335 551.0
DYD2_k127_5741486_1 Oxygen tolerance - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002224 479.0
DYD2_k127_5741486_2 Belongs to the dicarboxylate amino acid cation symporter (DAACS) (TC 2.A.23) family - - - 0.000000000000000002489 86.0
DYD2_k127_5753665_0 Catalyzes the reversible transfer of the terminal phosphate of ATP to form a long-chain polyphosphate (polyP) K00937 - 2.7.4.1 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005072 353.0
DYD2_k127_5755891_0 PFAM Peptidase M1, membrane alanine aminopeptidase K01256 - 3.4.11.2 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000292 407.0
DYD2_k127_5755891_1 Prolyl oligopeptidase, N-terminal beta-propeller domain K01354 GO:0003674,GO:0003824,GO:0004175,GO:0004252,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006508,GO:0006807,GO:0008150,GO:0008152,GO:0008233,GO:0008236,GO:0016787,GO:0017171,GO:0019538,GO:0043170,GO:0044238,GO:0044424,GO:0044464,GO:0070011,GO:0070012,GO:0071704,GO:0140096,GO:1901564 3.4.21.83 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003041 348.0
DYD2_k127_5762926_0 PFAM Tetratricopeptide repeat - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009597 498.0
DYD2_k127_5762926_1 PFAM NAD dependent epimerase dehydratase family K00091 - 1.1.1.219 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001881 316.0
DYD2_k127_5762926_2 capsular polysaccharide biosynthesis protein K01104 - 3.1.3.48 0.0000000000000000000000000000000000000000000000000000000000000000000000000006971 261.0
DYD2_k127_5766943_0 DNA polymerase III, delta' subunit K02341 - 2.7.7.7 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000674 304.0
DYD2_k127_5766943_1 Tetrapolymerization of the monopyrrole PBG into the hydroxymethylbilane pre-uroporphyrinogen in several discrete steps K01749 - 2.5.1.61 0.00000000000000000000000001255 110.0
DYD2_k127_577562_0 WD40 repeats - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001072 363.0
DYD2_k127_5776125_0 KR domain K00038 - 1.1.1.53 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001451 376.0
DYD2_k127_5776125_1 Sigma-70, region 4 K03088 - - 0.00000000000000001902 87.0
DYD2_k127_5786868_0 ATPase, P-type (transporting), HAD superfamily, subfamily IC K01533,K17686 - 3.6.3.4,3.6.3.54 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003185 406.0
DYD2_k127_5786868_1 Belongs to the CDS family K00981 - 2.7.7.41 0.00000000000000000000000000000133 121.0
DYD2_k127_5786868_2 TIGRFAM cytochrome oxidase maturation protein, cbb3-type - - - 0.0000000003495 62.0
DYD2_k127_5798622_0 Histidine kinase - - - 0.000000001682 70.0
DYD2_k127_5805545_0 protein CHP03519, membrane, Bacteroidetes - - - 0.0000006272 61.0
DYD2_k127_5805849_0 Catalyzes the conversion of 1-hydroxy-2-methyl-2-(E)- butenyl 4-diphosphate (HMBPP) into a mixture of isopentenyl diphosphate (IPP) and dimethylallyl diphosphate (DMAPP). Acts in the terminal step of the DOXP MEP pathway for isoprenoid precursor biosynthesis K03527 - 1.17.7.4 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002182 462.0
DYD2_k127_5805849_1 Belongs to the cytidylate kinase family. Type 1 subfamily K00945 GO:0003674,GO:0003824,GO:0004127,GO:0004592,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006082,GO:0006139,GO:0006520,GO:0006573,GO:0006575,GO:0006725,GO:0006732,GO:0006753,GO:0006766,GO:0006767,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009081,GO:0009108,GO:0009110,GO:0009117,GO:0009123,GO:0009165,GO:0009987,GO:0015939,GO:0015940,GO:0016053,GO:0016301,GO:0016310,GO:0016740,GO:0016772,GO:0016776,GO:0016874,GO:0016879,GO:0016881,GO:0018130,GO:0019205,GO:0019438,GO:0019637,GO:0019752,GO:0032787,GO:0033317,GO:0034641,GO:0034654,GO:0042364,GO:0042398,GO:0043436,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0044283,GO:0044424,GO:0044444,GO:0044464,GO:0046394,GO:0046483,GO:0046939,GO:0046940,GO:0050145,GO:0051186,GO:0051188,GO:0055086,GO:0071704,GO:0072330,GO:0090407,GO:1901293,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576,GO:1901605 2.7.4.25 0.000000000000000002612 86.0
DYD2_k127_5811319_0 Catalyzes the conversion of urocanate to 4-imidazolone- 5-propionate K01712 - 4.2.1.49 2.675e-316 975.0
DYD2_k127_5811319_1 Acyltransferase - - - 0.00000000000000000004696 90.0
DYD2_k127_5812676_0 Motility related/secretion protein - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002822 395.0
DYD2_k127_5817145_0 PFAM Tetratricopeptide - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001013 551.0
DYD2_k127_5817145_1 Domain of unknown function (DUF4292) - - - 0.0000000000000000000000000000000000001917 149.0
DYD2_k127_5818394_0 PFAM MazG nucleotide pyrophosphohydrolase K02428 - 3.6.1.66 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001901 376.0
DYD2_k127_5818394_1 - - - - 0.000000000000000000000004033 103.0
DYD2_k127_5820707_0 PFAM Zinc carboxypeptidase - - - 2.299e-270 848.0
DYD2_k127_5820707_1 Carboxypeptidase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003961 567.0
DYD2_k127_5821365_0 Pkd domain containing protein - - - 0.00000000000000000000000000000000000000000000000000006471 212.0
DYD2_k127_5821365_1 C-terminal domain of CHU protein family - - - 0.00000000000000001197 98.0
DYD2_k127_5821365_2 Peptide-N-glycosidase F, C terminal - - - 0.00000000000004873 86.0
DYD2_k127_5823157_0 PFAM M42 glutamyl aminopeptidase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001303 536.0
DYD2_k127_5823157_1 Protein of unknown function (DUF2975) - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000002104 262.0
DYD2_k127_5823157_2 - - - - 0.000000000000000000000000000000000003036 141.0
DYD2_k127_5823157_3 COGs COG3655 transcriptional regulator protein K07727 - - 0.00000000000000000000000000000001186 127.0
DYD2_k127_5823157_4 PFAM TonB-dependent Receptor Plug - - - 0.00000000000000000000000000000004047 128.0
DYD2_k127_5825288_0 TonB-dependent Receptor Plug K02014 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008168 333.0
DYD2_k127_5825288_1 Domain of unknown function (DUF4920) - - - 0.00000000000000000000000000000000000000339 151.0
DYD2_k127_5825288_2 - - - - 0.0000000000008483 74.0
DYD2_k127_5825574_0 CarboxypepD_reg-like domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000003638 234.0
DYD2_k127_5825574_1 haloacid dehalogenase superfamily, subfamily IA, variant 1 with third motif having Dx(3-4)D or Dx(3-4)E K07025 - - 0.000000000000000000000000000000000000000000000000000000000000000005876 232.0
DYD2_k127_5825574_2 arsR family K03892 - - 0.00000000000000000000000000000000000000000000000000004398 190.0
DYD2_k127_5827070_0 PFAM peptidase M3A and M3B thimet oligopeptidase F K08602 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001881 541.0
DYD2_k127_5827070_1 in asymptomatic bacteriuria E. coli strains 83972 and VR50, the ygiD gene is upregulated during biofilm formation in urine K15777 - - 0.00000000000000000000000000000000000000000000001399 175.0
DYD2_k127_5827716_0 PFAM SAICAR synthetase K01923 GO:0003674,GO:0003824,GO:0004639,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006139,GO:0006163,GO:0006164,GO:0006188,GO:0006189,GO:0006725,GO:0006753,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009117,GO:0009123,GO:0009124,GO:0009126,GO:0009127,GO:0009150,GO:0009152,GO:0009156,GO:0009161,GO:0009165,GO:0009167,GO:0009168,GO:0009259,GO:0009260,GO:0009987,GO:0016874,GO:0016879,GO:0016881,GO:0018130,GO:0019438,GO:0019637,GO:0019693,GO:0034641,GO:0034654,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0044424,GO:0044464,GO:0046040,GO:0046390,GO:0046483,GO:0055086,GO:0071704,GO:0072521,GO:0072522,GO:0090407,GO:1901135,GO:1901137,GO:1901293,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576 6.3.2.6 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002368 443.0
DYD2_k127_5827716_1 Involved in the import of queuosine (Q) precursors, required for Q precursor salvage K09125 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001523 362.0
DYD2_k127_5827716_2 Zinc phosphodiesterase, which displays some tRNA 3'- processing endonuclease activity. Probably involved in tRNA maturation, by removing a 3'-trailer from precursor tRNA K00784 GO:0003674,GO:0003824,GO:0004518,GO:0004519,GO:0004521,GO:0004540,GO:0006139,GO:0006396,GO:0006399,GO:0006725,GO:0006807,GO:0008033,GO:0008150,GO:0008152,GO:0009987,GO:0010467,GO:0016070,GO:0016787,GO:0016788,GO:0016891,GO:0016893,GO:0031123,GO:0034414,GO:0034470,GO:0034641,GO:0034660,GO:0042779,GO:0042780,GO:0042781,GO:0043170,GO:0043628,GO:0044237,GO:0044238,GO:0046483,GO:0071704,GO:0090304,GO:0090305,GO:0090501,GO:0090502,GO:0140098,GO:1901360,GO:1905267 3.1.26.11 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001667 364.0
DYD2_k127_5827716_3 PFAM SpoU rRNA Methylase family K03437 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000004869 297.0
DYD2_k127_5827716_4 Belongs to the anti-sigma-factor antagonist family - - - 0.000000000000000000000000000000000000000000000000000715 186.0
DYD2_k127_583318_0 Belongs to the peptidase S41A family K03797 - 3.4.21.102 0.0000000000000000000000000000000000001889 144.0
DYD2_k127_583318_1 Sulfite exporter TauE/SafE - - - 0.00000000000000000000000006173 111.0
DYD2_k127_583318_2 CarboxypepD_reg-like domain - - - 0.0000002532 59.0
DYD2_k127_5849223_0 COGs COG2208 Serine phosphatase RsbU regulator of sigma subunit - - - 0.00000000000000000000000000000000000000000000000000000001448 212.0
DYD2_k127_5861517_0 chorismate mutase K04516 - 5.4.99.5 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000205 353.0
DYD2_k127_5861517_1 peptidase M1 - - - 0.0000000002419 62.0
DYD2_k127_5864419_0 SUPERFAMILY SSF53098, Polynucleotidyl transferase, Ribonuclease H fold - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003076 497.0
DYD2_k127_58668_0 ABC transporter - - - 2.894e-241 751.0
DYD2_k127_58668_1 Domain of Unknown Function (DUF349) - - - 0.00000000005432 64.0
DYD2_k127_5869410_0 TrkA-N domain K03499 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002126 369.0
DYD2_k127_5869410_1 Belongs to the uridine kinase family K00876 - 2.7.1.48 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005976 329.0
DYD2_k127_5869410_2 Plays an important role in DNA replication, recombination and repair. Binds to ssDNA and to an array of partner proteins to recruit them to their sites of action during DNA metabolism K03111 - - 0.00000000000000000000000000000000000000000000000001781 181.0
DYD2_k127_5869410_3 - - - - 0.0000000000000000000000000000000000002234 143.0
DYD2_k127_5871474_0 The purine nucleoside phosphorylases catalyze the phosphorolytic breakdown of the N-glycosidic bond in the beta- (deoxy)ribonucleoside molecules, with the formation of the corresponding free purine bases and pentose-1-phosphate K03783 - 2.4.2.1 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002394 347.0
DYD2_k127_5871474_1 Lipid A 3-O-deacylase (PagL) - - - 0.0000000000000000000000000000000000000000000000000000000000002867 224.0
DYD2_k127_5876116_0 Belongs to the MurCDEF family K03802 - 6.3.2.29,6.3.2.30 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001261 416.0
DYD2_k127_5876116_1 Belongs to the peptidase S51 family K13282 - 3.4.15.6 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001612 387.0
DYD2_k127_5876903_0 Participates in initiation and elongation during chromosome replication K02314 - 3.6.4.12 3.304e-243 760.0
DYD2_k127_5876903_1 Peptidoglycan synthetase K01924,K02558 - 6.3.2.45,6.3.2.8 0.000000000000000000000000000000000000000000000000000000001566 202.0
DYD2_k127_5876903_2 COG0457 FOG TPR repeat - - - 0.0000000000000000000000000000000000000000000002258 190.0
DYD2_k127_5893318_0 CHAT domain - - - 9.236e-313 975.0
DYD2_k127_5893318_1 Trypsin - - - 0.000000000000000000001058 95.0
DYD2_k127_5899130_0 Domain of unknown function (DU1801) - - - 0.00000000000000000000000000000000000000000000000000000000000000000002327 234.0
DYD2_k127_5899297_0 Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000003713 281.0
DYD2_k127_5899297_1 Two component regulator three Y - - - 0.0000000000000000000000000000000000000000000000000000002297 203.0
DYD2_k127_5901369_0 Gliding motility protein, GldB - - - 0.000000000000000000000000000000000000000000000000000002156 194.0
DYD2_k127_5922323_0 Fibronectin-binding protein A N-terminus (FbpA) - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001867 430.0
DYD2_k127_5922323_1 - - - - 0.00000000000003265 76.0
DYD2_k127_5930749_0 4Fe-4S dicluster domain K00184 - - 1.197e-194 612.0
DYD2_k127_5930749_1 PFAM Polysulphide reductase, NrfD K00185 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006978 497.0
DYD2_k127_5930749_2 PFAM Polysulphide reductase, NrfD K00185 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000424 316.0
DYD2_k127_5930749_3 Quinol cytochrome c oxidoreductase membrane protein - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000115 254.0
DYD2_k127_593744_0 Exhibits a very high intrinsic GTPase hydrolysis rate. Involved in the addition of a carboxymethylaminomethyl (cmnm) group at the wobble position (U34) of certain tRNAs, forming tRNA- cmnm(5)s(2)U34 K03650 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005736 523.0
DYD2_k127_593744_1 Protein of unknown function, DUF255 - - - 0.00000000000000000000000000000000000000000000000000000000002294 210.0
DYD2_k127_594594_0 Domain of Unknown Function with PDB structure (DUF3857) - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002223 417.0
DYD2_k127_594594_1 PFAM MerR family regulatory protein K22491 - - 0.0000000000000000000000000000000000000000000000000000000000000006461 221.0
DYD2_k127_594594_2 Domain of unknown function (DUF4286) - - - 0.00000000000000000000000000000003502 127.0
DYD2_k127_5950486_0 PAS fold - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008963 398.0
DYD2_k127_5950486_1 cheY-homologous receiver domain - - - 0.000000000000000001726 86.0
DYD2_k127_5951054_0 Involved in the biosynthesis of porphyrin-containing compound - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000002616 260.0
DYD2_k127_5951054_1 Peptidase M1 - - - 0.000000000000000000000000000000000000000000000000000000005758 203.0
DYD2_k127_5951054_2 Involved in the biosynthesis of porphyrin-containing compound - - - 0.00000000000000000000000000000000000000000000000001008 185.0
DYD2_k127_5955309_0 Reversibly transfers an adenylyl group from ATP to 4'- phosphopantetheine, yielding dephospho-CoA (dPCoA) and pyrophosphate K00954 - 2.7.7.3 0.0000000000000000000000000000000000000000000000000000000000000000008048 231.0
DYD2_k127_5955309_1 NUDIX domain - - - 0.00000000000000000000000000000000000000000000000000000000006258 210.0
DYD2_k127_5955309_2 Protein of unknown function (DUF3822) - - - 0.00000000000000001433 85.0
DYD2_k127_595703_0 PFAM ABC transporter K01990 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002931 379.0
DYD2_k127_595703_1 Sodium/calcium exchanger protein K07301 - - 0.00000000177 59.0
DYD2_k127_5994757_0 GTPase that associates with the 50S ribosomal subunit and may have a role during protein synthesis or ribosome biogenesis K03665 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007295 448.0
DYD2_k127_5994757_1 COG0202 DNA-directed RNA polymerase, alpha subunit 40 kD subunit - - - 0.000000000000000000000000000000000006912 138.0
DYD2_k127_6004521_0 His Kinase A (phosphoacceptor) domain - - - 0.0000000000000000000000000000000000000000000000000000000000000001003 237.0
DYD2_k127_6004521_1 transcriptional regulator - - - 0.00000000000000000000000000000000000001757 145.0
DYD2_k127_601511_0 PFAM Nitrilase cyanide hydratase and apolipoprotein N-acyltransferase - - - 8.849e-293 902.0
DYD2_k127_601511_1 Acetyl-CoA carboxylase carboxyltransferase component (subunits alpha and beta) K01966 - 2.1.3.15,6.4.1.3 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001149 427.0
DYD2_k127_6016_0 Belongs to the class-I aminoacyl-tRNA synthetase family K01869 GO:0003674,GO:0003824,GO:0004812,GO:0004823,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006082,GO:0006139,GO:0006399,GO:0006412,GO:0006418,GO:0006429,GO:0006518,GO:0006520,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0016070,GO:0016874,GO:0016875,GO:0019538,GO:0019752,GO:0034641,GO:0034645,GO:0034660,GO:0043038,GO:0043039,GO:0043043,GO:0043170,GO:0043436,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044281,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0071704,GO:0090304,GO:0140098,GO:0140101,GO:1901360,GO:1901564,GO:1901566,GO:1901576 6.1.1.4 3.669e-231 728.0
DYD2_k127_6016_1 - - - - 0.0000000001415 69.0
DYD2_k127_6021721_0 phosphate transporter K03306 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001366 394.0
DYD2_k127_6022544_0 phosphoesterase RecJ domain protein K06881 - 3.1.13.3,3.1.3.7 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003031 506.0
DYD2_k127_6022544_1 Major role in the synthesis of nucleoside triphosphates other than ATP. The ATP gamma phosphate is transferred to the NDP beta phosphate via a ping-pong mechanism, using a phosphorylated active-site intermediate K00940 - 2.7.4.6 0.00000000000000000000000004343 108.0
DYD2_k127_6022544_2 FKBP-type peptidyl-prolyl cis-trans isomerase - - - 0.00000001981 60.0
DYD2_k127_6022892_0 Catalyzes the attachment of L-aspartate to tRNA(Asp) in a two-step reaction L-aspartate is first activated by ATP to form Asp-AMP and then transferred to the acceptor end of tRNA(Asp) K01876 - 6.1.1.12 4.944e-287 888.0
DYD2_k127_6024501_0 ATP-dependent DNA helicase RecQ K03654 - 3.6.4.12 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003936 361.0
DYD2_k127_6024501_1 SnoaL-like polyketide cyclase - - - 0.0000000000000000000000000000000000000000000000000000000007374 202.0
DYD2_k127_6024501_2 PFAM Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase - - - 0.000000000000000000000000000003877 122.0
DYD2_k127_6048004_0 Methionine synthase K00548 - 2.1.1.13 0.00000000000000000000000000000000000000000000000002992 181.0
DYD2_k127_6048004_1 LVIVD repeat - - - 0.000000000000000000000000000000000000003815 150.0
DYD2_k127_60523_0 Alpha-2-Macroglobulin K06894 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001026 499.0
DYD2_k127_60523_1 Tetratricopeptide repeat - - - 0.0001643 45.0
DYD2_k127_6056442_0 Belongs to the 'phage' integrase family K04763 - - 0.00000000000000000000000000000001026 140.0
DYD2_k127_6056442_1 - - - - 0.000000000000000000000000000003221 124.0
DYD2_k127_6058438_0 Predicted periplasmic lipoprotein (DUF2279) - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001476 341.0
DYD2_k127_6058438_1 Domain of unknown function (DUF4382) - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000002962 262.0
DYD2_k127_6069276_0 Histidine kinase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001597 304.0
DYD2_k127_6069276_1 PFAM FAD-dependent pyridine nucleotide-disulphide oxidoreductase K03885 - 1.6.99.3 0.000000000000000000000000000000000000000000000007811 173.0
DYD2_k127_6069808_0 Transcriptional regulator PadR-like family - - - 0.000000000000000000000000000000000000000005611 158.0
DYD2_k127_6069808_1 MacB-like periplasmic core domain - - - 0.00002461 49.0
DYD2_k127_6072027_0 PAS domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001581 534.0
DYD2_k127_6072989_0 Catalyzes the conversion of 3-deoxy-D-arabino- heptulosonate 7-phosphate (DAHP) to dehydroquinate (DHQ) K01735 - 4.2.3.4 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000081 386.0
DYD2_k127_6072989_1 chorismate mutase K04516 - 5.4.99.5 0.000000000000000001767 86.0
DYD2_k127_6075561_0 AI-2E family transporter - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000002612 265.0
DYD2_k127_6075561_1 Belongs to the ompA family - - - 0.000000000000000000000000000000000000000000000000000007097 201.0
DYD2_k127_6083928_0 Catalyzes the phosphorylation of pyruvate to phosphoenolpyruvate K01007 - 2.7.9.2 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001017 420.0
DYD2_k127_609071_0 Catalyzes the reversible interconversion of isobutyryl- CoA and n-butyryl-CoA, using radical chemistry. Also exhibits GTPase activity, associated with its G-protein domain (MeaI) that functions as a chaperone that assists cofactor delivery and proper holo-enzyme assembly K11942 - 5.4.99.13 1.744e-218 681.0
DYD2_k127_609071_1 Increases the formation of ribosomal termination complexes and stimulates activities of RF-1 and RF-2. It binds guanine nucleotides and has strong preference for UGA stop codons. It may interact directly with the ribosome. The stimulation of RF- 1 and RF-2 is significantly reduced by GTP and GDP, but not by GMP K02837 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006766 553.0
DYD2_k127_609071_2 - - - - 0.000000000000000003523 87.0
DYD2_k127_6096791_0 GTP-binding protein TypA K06207 - - 0.0 1028.0
DYD2_k127_6096791_1 - - - - 0.00005738 49.0
DYD2_k127_6099009_0 PFAM Aminotransferase class I and II K00639 - 2.3.1.29 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001621 469.0
DYD2_k127_6101335_0 DAHP synthetase I family K03856 - 2.5.1.54 0.0000000000000000000000000000000000000000000000000000000000000000009667 231.0
DYD2_k127_6101335_1 Protein of unknown function (DUF3667) - - - 0.00000000000000000000000000000006165 136.0
DYD2_k127_6109040_0 nuclear chromosome segregation - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006619 412.0
DYD2_k127_6109930_0 and their inactivated homologs K03568 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002364 375.0
DYD2_k127_6109930_1 Poorly processive, error-prone DNA polymerase involved in untargeted mutagenesis. Copies undamaged DNA at stalled replication forks, which arise in vivo from mismatched or misaligned primer ends. These misaligned primers can be extended by PolIV. Exhibits no 3'-5' exonuclease (proofreading) activity. May be involved in translesional synthesis, in conjunction with the beta clamp from PolIII K02346 - 2.7.7.7 0.0000000000000000000000000000000000000000000000000000000000000000000000000000005005 267.0
DYD2_k127_6110734_0 Putative aminopeptidase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001334 345.0
DYD2_k127_6110734_1 Protein of unknown function (DUF3108) - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000002233 299.0
DYD2_k127_6116289_0 Flavin-binding monooxygenase-like - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001226 384.0
DYD2_k127_6116289_1 PFAM Low molecular weight phosphotyrosine protein phosphatase K01104,K03741 - 1.20.4.1,3.1.3.48 0.000000000000000000000000000000000000000000000000000000000000000000007623 239.0
DYD2_k127_6116289_2 PFAM Bacterial regulatory protein, arsR family - - - 0.00000000000000000000000000000000001041 138.0
DYD2_k127_6119863_0 Catalyzes the synthesis of acetoacetyl coenzyme A from two molecules of acetyl coenzyme A. It can also act as a thiolase, catalyzing the reverse reaction and generating two-carbon units from the four-carbon product of fatty acid oxidation K00626,K00632 - 2.3.1.16,2.3.1.9 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008132 496.0
DYD2_k127_6119863_1 Protein of unknown function (DUF2798) - - - 0.00000000000000000000004543 100.0
DYD2_k127_6122540_0 PFAM GH3 auxin-responsive promoter - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005783 522.0
DYD2_k127_6122540_1 Trypsin - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000234 495.0
DYD2_k127_6123464_0 PFAM Transketolase, C-terminal domain K00615 - 2.2.1.1 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003561 524.0
DYD2_k127_6123464_1 Protein of unknown function (DUF3108) - - - 0.000000000000000000000000000000000000000000000000000000000003136 214.0
DYD2_k127_6130825_0 Dehydrogenase E1 component K00615 - 2.2.1.1 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009157 589.0
DYD2_k127_6130825_1 - - - - 0.00000000000000000000000000000000008031 142.0
DYD2_k127_6130825_2 PFAM Acyl-protein synthetase, LuxE - - - 0.00000000000000533 76.0
DYD2_k127_6130880_0 Sigma factor PP2C-like phosphatases - - - 0.00000000000000000000000000000000000000000000000000000000000000000717 236.0
DYD2_k127_6130880_1 Sigma factor PP2C-like phosphatases - - - 0.000000000000000000000000000000000003242 138.0
DYD2_k127_6142193_0 Glucose / Sorbosone dehydrogenase - - - 0.000000000000000000000000000000000000000000000000000000000000005367 238.0
DYD2_k127_614420_0 The RuvA-RuvB complex in the presence of ATP renatures cruciform structure in supercoiled DNA with palindromic sequence, indicating that it may promote strand exchange reactions in homologous recombination. RuvAB is a helicase that mediates the Holliday junction migration by localized denaturation and reannealing K03551 - 3.6.4.12 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002004 574.0
DYD2_k127_614420_1 Flavin transferase that catalyzes the transfer of the FMN moiety of FAD and its covalent binding to the hydroxyl group of a threonine residue in a target flavoprotein K03734 - 2.7.1.180 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001503 374.0
DYD2_k127_614420_2 Tellurite resistance protein TehB - - - 0.00000000000000000000000000000000000000000000000000000000000000000000009397 244.0
DYD2_k127_614420_3 Ion transport 2 domain protein K10716 - - 0.00000000000000000000000000000000000000000000000000000000000000001356 230.0
DYD2_k127_6147650_0 hemolysin III K11068 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000008044 280.0
DYD2_k127_6147650_1 Putative auto-transporter adhesin, head GIN domain - - - 0.00000000000002712 81.0
DYD2_k127_6155148_0 Part of the Sec protein translocase complex. Interacts with the SecYEG preprotein conducting channel. SecDF uses the proton motive force (PMF) to complete protein translocation after the ATP-dependent function of SecA K03072,K12257 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001028 371.0
DYD2_k127_6155148_1 Tetratricopeptide repeat - - - 0.00001885 53.0
DYD2_k127_6158528_0 TIGRFAM succinate dehydrogenase and fumarate reductase iron-sulfur protein K00240 - 1.3.5.1,1.3.5.4 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006493 461.0
DYD2_k127_6158528_1 Domain of unknown function (DUF4494) - - - 0.0000000000000000000000000000000000000000000000000000000001455 207.0
DYD2_k127_6158528_2 Succinate dehydrogenase or fumarate reductase, flavoprotein subunit K00239 - 1.3.5.1,1.3.5.4 0.0000000000000000000000000000000000002899 140.0
DYD2_k127_6166766_0 PFAM peptidase S45 penicillin amidase K01434 - 3.5.1.11 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006584 496.0
DYD2_k127_6168936_0 PFAM GlcNAc-PI de-N-acetylase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001095 421.0
DYD2_k127_6170715_0 Bifunctional enzyme that catalyzes the epimerization of the S- and R-forms of NAD(P)HX and the dehydration of the S-form of NAD(P)HX at the expense of ADP, which is converted to AMP. This allows the repair of both epimers of NAD(P)HX, a damaged form of NAD(P)H that is a result of enzymatic or heat-dependent hydration K17758,K17759 - 4.2.1.136,5.1.99.6 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000007648 287.0
DYD2_k127_6170715_1 MarC family integral membrane protein K05595 - - 0.00000000000000000000000000000000000000000000000000004626 194.0
DYD2_k127_6170715_2 Peptidoglycan polymerase that catalyzes glycan chain elongation from lipid-linked precursors K03814 - 2.4.1.129 0.00002399 50.0
DYD2_k127_6177711_0 Belongs to the SOS response-associated peptidase family - - - 0.000000000000000000000000000000000000000000000000000000000009652 214.0
DYD2_k127_6177711_1 The pyruvate dehydrogenase complex catalyzes the overall conversion of pyruvate to acetyl-CoA and CO(2) K00627 - 2.3.1.12 0.00000000000000000000000000000000000000001379 154.0
DYD2_k127_6180528_0 Catalyzes the oxidation of 5,10- methylenetetrahydrofolate to 5,10-methenyltetrahydrofolate and then the hydrolysis of 5,10-methenyltetrahydrofolate to 10- formyltetrahydrofolate K01491 GO:0003674,GO:0003824,GO:0004477,GO:0004488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006730,GO:0008150,GO:0008152,GO:0009987,GO:0016491,GO:0016645,GO:0016646,GO:0016787,GO:0016810,GO:0016814,GO:0019238,GO:0044237,GO:0044281,GO:0044424,GO:0044444,GO:0044464,GO:0055114 1.5.1.5,3.5.4.9 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004177 424.0
DYD2_k127_6180528_1 Belongs to the ompA family - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004178 395.0
DYD2_k127_6180528_2 Catalyzes the complex heterocyclic radical-mediated conversion of 6-carboxy-5,6,7,8-tetrahydropterin (CPH4) to 7- carboxy-7-deazaguanine (CDG), a step common to the biosynthetic pathways of all 7-deazapurine-containing compounds K10026 - 4.3.99.3 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000004759 312.0
DYD2_k127_618460_0 Chloride channel protein - - - 3.156e-207 651.0
DYD2_k127_618460_1 Peptidoglycan-synthase activator LpoB K07337 - - 0.0000000000000000000000000000000000000000000000000000000000003955 213.0
DYD2_k127_6185725_0 phosphorelay sensor kinase activity - - - 0.0000000000000000000000006693 111.0
DYD2_k127_6185725_1 LytTr DNA-binding domain - - - 0.0000000000000002026 87.0
DYD2_k127_6185725_2 COG0642 Signal transduction histidine kinase - - - 0.0000355 51.0
DYD2_k127_618760_0 Cell division protein DivIC (FtsB), stabilizes FtsL against RasP cleavage - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003574 379.0
DYD2_k127_618760_1 - - - - 0.0000000000000000000000000000000000002648 146.0
DYD2_k127_618760_2 integral membrane protein - - - 0.000000000002912 76.0
DYD2_k127_618760_3 Protein of unknown function (DUF2752) - - - 0.000001665 54.0
DYD2_k127_6198094_0 Type ii and iii secretion system protein - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000002499 291.0
DYD2_k127_6198094_1 Domain of unknown function (DUF4974) - - - 0.0000000000000000000000000000000000000000000000000000003495 205.0
DYD2_k127_6198094_2 RNA polymerase sigma factor, sigma-70 family K03088 - - 0.0000000000000000000000000000000000000002376 153.0
DYD2_k127_6200797_0 peptidyl-prolyl isomerase K03771 - 5.2.1.8 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002905 544.0
DYD2_k127_6200797_1 PFAM ATPase associated with various cellular activities K03924 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002555 518.0
DYD2_k127_6200797_2 nitrite reductase [NAD(P)H] activity - - - 0.00000000000000000000000000000000001372 139.0
DYD2_k127_6208058_0 Belongs to the carbohydrate kinase PfkB family - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009885 387.0
DYD2_k127_6208058_1 PFAM Glycerophosphoryl diester phosphodiesterase K01126 - 3.1.4.46 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007011 321.0
DYD2_k127_6208058_2 Redoxin - - - 0.00000000000000000000001242 102.0
DYD2_k127_6208058_3 - - - - 0.00001736 49.0
DYD2_k127_6212063_0 3-hydroxyacyl-CoA dehydrogenase K07516 - 1.1.1.35 6.556e-293 906.0
DYD2_k127_6212063_1 Catalyzes the synthesis of acetoacetyl coenzyme A from two molecules of acetyl coenzyme A. It can also act as a thiolase, catalyzing the reverse reaction and generating two-carbon units from the four-carbon product of fatty acid oxidation K00632 - 2.3.1.16 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003555 491.0
DYD2_k127_6212063_2 23S rRNA-intervening sequence protein - - - 0.00000000000000000000000000000000000000000003279 164.0
DYD2_k127_6215515_0 Catalyzes the condensation of 2 ATP molecules into cyclic di-AMP (c-di-AMP), a second messenger used to regulate differing processes in different bacteria - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000008716 275.0
DYD2_k127_6215515_1 Catalyzes the condensation of para-aminobenzoate (pABA) with 6-hydroxymethyl-7,8-dihydropterin diphosphate (DHPt-PP) to form 7,8-dihydropteroate (H2Pte), the immediate precursor of folate derivatives K00796 - 2.5.1.15 0.00000000000000000000000000000000000000000000000000000000000000004066 226.0
DYD2_k127_6226043_0 Ammonium Transporter Family K03320 - - 5.968e-194 612.0
DYD2_k127_6226043_1 - - - - 0.00000000000000003334 89.0
DYD2_k127_6227539_0 transcriptional regulatory protein - GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0044424,GO:0044444,GO:0044464 - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003944 342.0
DYD2_k127_6227539_1 metallopeptidase activity - - - 0.000000000000002317 84.0
DYD2_k127_6237094_0 PFAM Pyridoxal-dependent decarboxylase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002396 347.0
DYD2_k127_6237094_1 membrane protein TerC K05794 - - 0.000000000000000000000000000001105 122.0
DYD2_k127_6259253_0 Y_Y_Y domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009383 407.0
DYD2_k127_626801_0 Belongs to the pyruvate kinase family K00873 - 2.7.1.40 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002929 353.0
DYD2_k127_626801_1 - - - - 0.00000000002306 65.0
DYD2_k127_6274795_0 ATP-dependent specificity component of the Clp protease. It directs the protease to specific substrates. Can perform chaperone functions in the absence of ClpP K03544 GO:0000166,GO:0003674,GO:0003824,GO:0004176,GO:0005488,GO:0005524,GO:0006508,GO:0006807,GO:0008144,GO:0008150,GO:0008152,GO:0008233,GO:0009056,GO:0009057,GO:0009987,GO:0016462,GO:0016787,GO:0016817,GO:0016818,GO:0016887,GO:0017076,GO:0017111,GO:0019538,GO:0030163,GO:0030554,GO:0032553,GO:0032555,GO:0032559,GO:0035639,GO:0036094,GO:0042623,GO:0043167,GO:0043168,GO:0043170,GO:0044238,GO:0051301,GO:0070011,GO:0071704,GO:0097159,GO:0097367,GO:0140096,GO:1901265,GO:1901363,GO:1901564,GO:1901565,GO:1901575 - 8.589e-203 637.0
DYD2_k127_6274795_1 Condensation of UDP-2,3-diacylglucosamine and 2,3- diacylglucosamine-1-phosphate to form lipid A disaccharide, a precursor of lipid A, a phosphorylated glycolipid that anchors the lipopolysaccharide to the outer membrane of the cell K00748 - 2.4.1.182 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001606 434.0
DYD2_k127_6274795_2 Cleaves peptides in various proteins in a process that requires ATP hydrolysis. Has a chymotrypsin-like activity. Plays a major role in the degradation of misfolded proteins K01358 - 3.4.21.92 0.00000000000000000000000000000000000000002476 153.0
DYD2_k127_6275196_0 methyltransferase - - - 0.00000000000000000000000000000000000000000000000000000000008516 214.0
DYD2_k127_6275196_1 Peptidase dimerisation domain K01451 - 3.5.1.32 0.0000000000000000000000000000000000000000000000000001074 190.0
DYD2_k127_6275196_2 This protein binds to 23S rRNA in the presence of protein L20 K02888 GO:0003674,GO:0003735,GO:0005198 - 0.00000000000000000000000000000000000000000000003043 171.0
DYD2_k127_6275196_3 Belongs to the bacterial ribosomal protein bL27 family K02899 GO:0003674,GO:0003735,GO:0005198,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0015934,GO:0022625,GO:0022626,GO:0032991,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:1990904 - 0.000000000000000000000000000000000000000005896 154.0
DYD2_k127_6275196_4 2',5' RNA ligase - - - 0.0000225 54.0
DYD2_k127_6283831_0 Belongs to the citrate synthase family K01647 - 2.3.3.1 2.533e-210 656.0
DYD2_k127_6283831_1 Iron-binding zinc finger CDGSH type - - - 0.000000000000000000001225 95.0
DYD2_k127_6284558_0 Belongs to the class-IV pyridoxal-phosphate-dependent aminotransferase family K00826 - 2.6.1.42 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002471 417.0
DYD2_k127_6284558_1 Belongs to the IlvD Edd family K01687 - 4.2.1.9 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006291 301.0
DYD2_k127_629228_0 Outer membrane protein assembly complex, YaeT protein K07277 - - 0.0 1039.0
DYD2_k127_629228_1 Catalyzes the condensation of isopentenyl diphosphate (IPP) with allylic pyrophosphates generating different type of terpenoids K00806 GO:0002094,GO:0003674,GO:0003824,GO:0004659,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006066,GO:0006629,GO:0006720,GO:0008150,GO:0008152,GO:0008299,GO:0008610,GO:0009058,GO:0009987,GO:0016093,GO:0016094,GO:0016740,GO:0016765,GO:0044237,GO:0044238,GO:0044249,GO:0044255,GO:0044281,GO:0044283,GO:0044424,GO:0044444,GO:0044464,GO:0046165,GO:0071704,GO:1901576,GO:1901615,GO:1901617 2.5.1.31 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001011 360.0
DYD2_k127_629228_2 PFAM Outer membrane protein (OmpH-like) K06142 - - 0.00000000000000000000000000000000000000000000000000000000000000000005919 235.0
DYD2_k127_629228_3 peptidase U61 LD-carboxypeptidase A K01297 - 3.4.17.13 0.000000000000000000000000000000000000000000000000000000000000000199 227.0
DYD2_k127_629228_4 PFAM Outer membrane protein (OmpH-like) K06142 - - 0.000000000000000000000000000000000000000000000001741 179.0
DYD2_k127_629228_5 Outer membrane protein beta-barrel domain - - - 0.0000000000000000000001381 99.0
DYD2_k127_6293073_0 - - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006615 325.0
DYD2_k127_6293073_1 - - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000001894 287.0
DYD2_k127_6293073_2 TIGRFAM comF family protein K00764 - 2.4.2.14 0.00000000000000000000000000000000000000000000000000000000000005144 220.0
DYD2_k127_6293073_3 One of several proteins that assist in the late maturation steps of the functional core of the 30S ribosomal subunit. Associates with free 30S ribosomal subunits (but not with 30S subunits that are part of 70S ribosomes or polysomes). Required for efficient processing of 16S rRNA. May interact with the 5'-terminal helix region of 16S rRNA K02834 - - 0.00000000000000000000000000000000000009867 146.0
DYD2_k127_6293073_4 - - - - 0.00000000000000000000000001282 110.0
DYD2_k127_6300098_0 PFAM Amidohydrolase 2 - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004217 552.0
DYD2_k127_6300098_1 Protein of unknown function (DUF2911) - - - 0.0000000000000000000000000000000000000008034 151.0
DYD2_k127_630115_0 PFAM Vacuole effluxer Atg22 like K06902 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000209 565.0
DYD2_k127_630115_1 Biopolymer transport protein ExbD/TolR K03559 - - 0.00000006948 54.0
DYD2_k127_632508_0 Peptidoglycan polymerase that catalyzes glycan chain elongation from lipid-linked precursors K03814 - 2.4.1.129 0.000000000000000000000000000000000000000000000000000000000001054 216.0
DYD2_k127_632508_2 GHKL domain - - - 0.000000000000000001038 88.0
DYD2_k127_6346815_0 Peptidoglycan polymerase that catalyzes glycan chain elongation from lipid-linked precursors - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007092 321.0
DYD2_k127_6346815_1 cellulose binding - - - 0.0000009142 56.0
DYD2_k127_6358044_0 Catalyzes the acyloin condensation reaction between C atoms 2 and 3 of pyruvate and glyceraldehyde 3-phosphate to yield 1-deoxy-D-xylulose-5-phosphate (DXP) K01662 - 2.2.1.7 5.024e-215 671.0
DYD2_k127_6358044_1 Participates in chromosomal partition during cell division. May act via the formation of a condensin-like complex containing Smc and ScpB that pull DNA away from mid-cell into both cell halves K05896 - - 0.0000000000000000000000000000000000000000000000000000001068 196.0
DYD2_k127_6365739_0 Belongs to the heme-copper respiratory oxidase family K02274 - 1.9.3.1 3.045e-247 767.0
DYD2_k127_6365739_1 Subunits I and II form the functional core of the enzyme complex. Electrons originating in cytochrome c are transferred via heme a and Cu(A) to the binuclear center formed by heme a3 and Cu(B) K02275 - 1.9.3.1 0.000000000000000000000000000000000000000000000001013 176.0
DYD2_k127_6383783_0 Catalyzes the ATP-dependent amination of UTP to CTP with either L-glutamine or ammonia as the source of nitrogen. Regulates intracellular CTP levels through interactions with the four ribonucleotide triphosphates K01937 - 6.3.4.2 2.459e-294 909.0
DYD2_k127_6383783_1 Required for the insertion and or proper folding and or complex formation of integral membrane proteins into the membrane. Involved in integration of membrane proteins that insert both dependently and independently of the Sec translocase complex, as well as at least some lipoproteins. Aids folding of multispanning membrane proteins K03217 - - 1.905e-201 644.0
DYD2_k127_6388411_0 Domain of Unknown Function (DUF349) - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004363 524.0
DYD2_k127_6388411_1 Catalyzes the synthesis of GMP from XMP K01951 GO:0003674,GO:0003824,GO:0003921,GO:0003922,GO:0006139,GO:0006163,GO:0006164,GO:0006177,GO:0006725,GO:0006753,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009116,GO:0009117,GO:0009119,GO:0009123,GO:0009124,GO:0009126,GO:0009127,GO:0009150,GO:0009152,GO:0009156,GO:0009161,GO:0009163,GO:0009165,GO:0009167,GO:0009168,GO:0009259,GO:0009260,GO:0009987,GO:0016874,GO:0016879,GO:0016884,GO:0018130,GO:0019438,GO:0019637,GO:0019693,GO:0034404,GO:0034641,GO:0034654,GO:0042278,GO:0042451,GO:0042455,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0044283,GO:0046037,GO:0046128,GO:0046129,GO:0046390,GO:0046483,GO:0055086,GO:0071704,GO:0072521,GO:0072522,GO:0090407,GO:1901068,GO:1901070,GO:1901135,GO:1901137,GO:1901293,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576,GO:1901657,GO:1901659 6.3.5.2 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000127 346.0
DYD2_k127_6392158_0 alcohol dehydrogenase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005969 406.0
DYD2_k127_6392158_1 Domain of unknown function (DUF4349) - - - 0.000000000000000000000000000000000001967 143.0
DYD2_k127_6392158_2 Catalyzes the formation of L-methionine and acetate from O-acetyl-L-homoserine and methanethiol K01740 - 2.5.1.49 0.00000000000000000000009086 98.0
DYD2_k127_6405569_0 A type II topoisomerase that negatively supercoils closed circular double-stranded (ds) DNA in an ATP-dependent manner to modulate DNA topology and maintain chromosomes in an underwound state. Negative supercoiling favors strand separation, and DNA replication, transcription, recombination and repair, all of which involve strand separation. Also able to catalyze the interconversion of other topological isomers of dsDNA rings, including catenanes and knotted rings. Type II topoisomerases break and join 2 DNA strands simultaneously in an ATP-dependent manner K02470 - 5.99.1.3 3.175e-261 809.0
DYD2_k127_6405569_1 Catalyzes the reversible transfer of the terminal phosphate of ATP to form a long-chain polyphosphate (polyP) K00937 - 2.7.4.1 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001483 495.0
DYD2_k127_6405722_0 Histidine-specific methyltransferase, SAM-dependent - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003679 335.0
DYD2_k127_6405722_1 Sulfatase-modifying factor enzyme 1 - - - 0.000000000000000000000000000000000000000000000000000000000000003345 218.0
DYD2_k127_640665_0 Catalyzes the cleavage of 2-amino-3-ketobutyrate to glycine and acetyl-CoA K00639 - 2.3.1.29 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002349 379.0
DYD2_k127_640665_1 mechanosensitive ion channel K22044 - - 0.000000134 56.0
DYD2_k127_6440249_0 His Kinase A (phosphoacceptor) domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001197 548.0
DYD2_k127_6440249_1 Pyrimidine operon attenuation protein uracil phosphoribosyltransferase K02825 - 2.4.2.9 0.000000000000000000000000000000000000000000000000004555 185.0
DYD2_k127_6440249_2 transcriptional regulator K03719,K05800 - - 0.0000000000000000000000000000000000000000000013 166.0
DYD2_k127_6443518_0 7TM diverse intracellular signalling - - - 0.0000000000000000000000000000000000000000000000000000000000000000000001516 263.0
DYD2_k127_6443518_1 Tricorn protease homolog - - - 0.00000000001576 66.0
DYD2_k127_64456_0 cell adhesion involved in biofilm formation - - - 0.000000000000000000000000000000000000000000000000000003529 208.0
DYD2_k127_6449770_0 aconitate hydratase K01681 - 4.2.1.3 0.0 1099.0
DYD2_k127_6454631_0 ABC transporter - - - 7.696e-268 832.0
DYD2_k127_6454631_1 Protein of unknown function (DUF1761) - - - 0.0000000000000000000000000000000000006375 143.0
DYD2_k127_6457316_0 Efflux transporter, RND family, MFP subunit - - - 0.00000000000000000000000000000000000000000000000000000000000000000002588 243.0
DYD2_k127_6457316_1 COGs COG4591 ABC-type transport system involved in lipoprotein release permease component K09808 - - 0.00000000000000000000000000000000000000000000001015 173.0
DYD2_k127_6458304_0 phytoene K10027 - 1.3.99.26,1.3.99.28,1.3.99.29,1.3.99.31 3.458e-194 616.0
DYD2_k127_6497060_0 Sortilin, neurotensin receptor 3, - - - 2.857e-199 629.0
DYD2_k127_6516287_0 A G-specific adenine glycosylase K03575 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004654 326.0
DYD2_k127_6516287_1 Plays an important role in DNA replication, recombination and repair. Binds to ssDNA and to an array of partner proteins to recruit them to their sites of action during DNA metabolism K03111 - - 0.0000000000000000000000000000000000000000000000003021 180.0
DYD2_k127_6520788_0 Cell wall-associated hydrolase (invasion-associated protein) - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008782 325.0
DYD2_k127_6520788_1 - - - - 0.0000000000000001982 81.0
DYD2_k127_6522938_0 Thioredoxin - - - 0.0000000000000000000000000000000000000000000000000000000008832 207.0
DYD2_k127_6522938_1 TIGRFAM RNA polymerase sigma factor, sigma-70 family K03088 - - 0.0000000000000000000000000000000001125 137.0
DYD2_k127_6522938_2 Histidine-specific methyltransferase, SAM-dependent - - - 0.00000000003951 64.0
DYD2_k127_6539466_0 One of the primary rRNA binding proteins. Required for association of the 30S and 50S subunits to form the 70S ribosome, for tRNA binding and peptide bond formation. It has been suggested to have peptidyltransferase activity K02886 GO:0002181,GO:0003674,GO:0003676,GO:0003723,GO:0003735,GO:0005198,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0006412,GO:0006518,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0015934,GO:0019538,GO:0022625,GO:0022626,GO:0032991,GO:0034641,GO:0034645,GO:0043043,GO:0043170,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:0071704,GO:0097159,GO:1901363,GO:1901564,GO:1901566,GO:1901576,GO:1990904 - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004736 451.0
DYD2_k127_6539466_1 Binds the lower part of the 30S subunit head. Binds mRNA in the 70S ribosome, positioning it for translation K02982 GO:0002181,GO:0003674,GO:0003735,GO:0005198,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0006412,GO:0006518,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0015935,GO:0019538,GO:0022626,GO:0022627,GO:0032991,GO:0034641,GO:0034645,GO:0043043,GO:0043170,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:0071704,GO:1901564,GO:1901566,GO:1901576,GO:1990904 - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004714 396.0
DYD2_k127_6539466_10 Binds 16S rRNA, required for the assembly of 30S particles and may also be responsible for determining the conformation of the 16S rRNA at the A site K02954 GO:0003674,GO:0003735,GO:0005198,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005840,GO:0006412,GO:0006518,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0015935,GO:0019538,GO:0032991,GO:0034641,GO:0034645,GO:0043043,GO:0043170,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044446,GO:0044464,GO:0071704,GO:1901564,GO:1901566,GO:1901576,GO:1990904 - 0.00000000000000000000000000000000000000000002411 162.0
DYD2_k127_6539466_11 One of the early assembly proteins it binds 23S rRNA. One of the proteins that surrounds the polypeptide exit tunnel on the outside of the ribosome. Forms the main docking site for trigger factor binding to the ribosome K02892 - - 0.0000000000000000000000000000000000000000001089 160.0
DYD2_k127_6539466_12 One of the primary rRNA binding proteins, it binds specifically to the 5'-end of 16S ribosomal RNA K02961 GO:0003674,GO:0003735,GO:0005198,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0006412,GO:0006518,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0015935,GO:0019538,GO:0022626,GO:0022627,GO:0032991,GO:0034641,GO:0034645,GO:0043043,GO:0043170,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:0071704,GO:1901564,GO:1901566,GO:1901576,GO:1990904 - 0.000000000000000000000000000000000000007203 146.0
DYD2_k127_6539466_13 This protein binds to the 23S rRNA, and is important in its secondary structure. It is located near the subunit interface in the base of the L7 L12 stalk, and near the tRNA binding site of the peptidyltransferase center K02933 GO:0002181,GO:0003674,GO:0003676,GO:0003723,GO:0003735,GO:0005198,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0006412,GO:0006518,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0015934,GO:0019538,GO:0022625,GO:0022626,GO:0032991,GO:0034641,GO:0034645,GO:0043043,GO:0043170,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:0071704,GO:0097159,GO:1901363,GO:1901564,GO:1901566,GO:1901576,GO:1990904 - 0.000000000000000000000000000000000006909 137.0
DYD2_k127_6539466_14 One of the primary rRNA binding proteins, it binds directly near the 3'-end of the 23S rRNA, where it nucleates assembly of the 50S subunit K02906 - - 0.0000000000000000000000005965 104.0
DYD2_k127_6539466_15 Belongs to the universal ribosomal protein uL29 family K02904 GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0015934,GO:0022625,GO:0022626,GO:0032991,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:1990904 - 0.000000000000000739 78.0
DYD2_k127_6539466_2 This is 1 of the proteins that binds and probably mediates the attachment of the 5S RNA into the large ribosomal subunit, where it forms part of the central protuberance. In the 70S ribosome it contacts protein S13 of the 30S subunit (bridge B1b), connecting the 2 subunits K02931 GO:0000027,GO:0003674,GO:0003676,GO:0003723,GO:0003735,GO:0005198,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0006412,GO:0006518,GO:0006807,GO:0006996,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0015934,GO:0016043,GO:0019538,GO:0022607,GO:0022613,GO:0022618,GO:0022625,GO:0022626,GO:0032991,GO:0034622,GO:0034641,GO:0034645,GO:0042254,GO:0042255,GO:0042273,GO:0043043,GO:0043170,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043603,GO:0043604,GO:0043933,GO:0044085,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:0065003,GO:0070925,GO:0071704,GO:0071826,GO:0071840,GO:0097159,GO:1901363,GO:1901564,GO:1901566,GO:1901576,GO:1990904 - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000116 315.0
DYD2_k127_6539466_3 Forms part of the polypeptide exit tunnel K02926 GO:0003674,GO:0003676,GO:0003723,GO:0003735,GO:0005198,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0006412,GO:0006518,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0019538,GO:0022626,GO:0032991,GO:0034641,GO:0034645,GO:0043043,GO:0043170,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044424,GO:0044444,GO:0044445,GO:0044464,GO:0071704,GO:0097159,GO:1901363,GO:1901564,GO:1901566,GO:1901576,GO:1990904 - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000133 302.0
DYD2_k127_6539466_4 Binds 23S rRNA and is also seen to make contacts with the A and possibly P site tRNAs K02878 GO:0003674,GO:0003676,GO:0003723,GO:0003735,GO:0005198,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0015934,GO:0019843,GO:0022625,GO:0022626,GO:0032991,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:0097159,GO:1901363,GO:1990904 - 0.0000000000000000000000000000000000000000000000000000000000000000000000001131 249.0
DYD2_k127_6539466_5 Binds to 23S rRNA. Forms part of two intersubunit bridges in the 70S ribosome K02874 GO:0003674,GO:0003676,GO:0003723,GO:0003735,GO:0005198,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0015934,GO:0019843,GO:0022625,GO:0022626,GO:0032991,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:0070180,GO:0097159,GO:1901363,GO:1990904 - 0.000000000000000000000000000000000000000000000000000000000000000006214 226.0
DYD2_k127_6539466_6 One of the primary rRNA binding proteins, it binds directly to 16S rRNA central domain where it helps coordinate assembly of the platform of the 30S subunit K02994 GO:0003674,GO:0003735,GO:0005198,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0015935,GO:0022626,GO:0022627,GO:0032991,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:1990904 - 0.0000000000000000000000000000000000000000000000000000000000000005354 221.0
DYD2_k127_6539466_7 Protein S19 forms a complex with S13 that binds strongly to the 16S ribosomal RNA K02965 GO:0000028,GO:0003674,GO:0003735,GO:0005198,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0006996,GO:0008150,GO:0009987,GO:0015935,GO:0016043,GO:0022607,GO:0022613,GO:0022618,GO:0022626,GO:0022627,GO:0032991,GO:0034622,GO:0042254,GO:0042255,GO:0042274,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043933,GO:0044085,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:0065003,GO:0070925,GO:0071826,GO:0071840,GO:1990904 - 0.0000000000000000000000000000000000000000000000000001225 186.0
DYD2_k127_6539466_8 The globular domain of the protein is located near the polypeptide exit tunnel on the outside of the subunit, while an extended beta-hairpin is found that lines the wall of the exit tunnel in the center of the 70S ribosome K02890 GO:0003674,GO:0003735,GO:0005198,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0015934,GO:0022625,GO:0022626,GO:0032991,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:1990904 - 0.000000000000000000000000000000000000000000000000006769 183.0
DYD2_k127_6539466_9 One of the proteins that surrounds the polypeptide exit tunnel on the outside of the subunit K02895 GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0006412,GO:0006518,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0015934,GO:0019538,GO:0022625,GO:0022626,GO:0032991,GO:0034641,GO:0034645,GO:0043043,GO:0043170,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:0071704,GO:1901564,GO:1901566,GO:1901576,GO:1990904 - 0.00000000000000000000000000000000000000000000003678 171.0
DYD2_k127_6543656_0 Belongs to the Glu Leu Phe Val dehydrogenases family K00261 - 1.4.1.3 6.053e-239 743.0
DYD2_k127_6543656_1 Asparaginyl-tRNA synthetase K01893 - 6.1.1.22 4.991e-214 668.0
DYD2_k127_6546698_0 COG0577 ABC-type antimicrobial peptide transport system permease component K02004 - - 0.00000000000000001518 83.0
DYD2_k127_6563425_0 Catalyzes the decarboxylation of four acetate groups of uroporphyrinogen-III to yield coproporphyrinogen-III K01599 - 4.1.1.37 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001471 576.0
DYD2_k127_6563425_1 Sugar nucleotidyl transferase - - - 0.000000000000000000000000000000000000000000000000000000000000000004953 233.0
DYD2_k127_6563425_2 His Kinase A (phosphoacceptor) domain - - - 0.00000000000000000000000000000000000000000000000002124 193.0
DYD2_k127_6565071_0 - - - - 0.000000000000002725 87.0
DYD2_k127_6567607_0 Imelysin K07338 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000005098 270.0
DYD2_k127_6567607_1 Horizontally Transferred TransMembrane Domain - - - 0.00000000000000000000000001255 112.0
DYD2_k127_6575163_0 DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates K03046 GO:0000428,GO:0005575,GO:0005622,GO:0005623,GO:0030880,GO:0032991,GO:0044424,GO:0044464,GO:0061695,GO:1902494,GO:1990234 2.7.7.6 9.767e-309 947.0
DYD2_k127_6575163_1 DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates K03043 GO:0000428,GO:0005575,GO:0005622,GO:0005623,GO:0030880,GO:0032991,GO:0044424,GO:0044464,GO:0061695,GO:1902494,GO:1990234 2.7.7.6 2.233e-202 632.0
DYD2_k127_658152_0 Receptor K02014,K16089 - - 0.00000000000000000000000000000000000000000000000000000001083 205.0
DYD2_k127_6582831_0 signal peptide peptidase SppA, 36K type K04773 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006446 455.0
DYD2_k127_6583419_0 Histidine kinase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001221 596.0
DYD2_k127_6583989_0 Belongs to the phenylalanyl-tRNA synthetase beta subunit family. Type 1 subfamily K01890 GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006082,GO:0006139,GO:0006399,GO:0006412,GO:0006418,GO:0006432,GO:0006518,GO:0006520,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009328,GO:0009987,GO:0010467,GO:0016070,GO:0019538,GO:0019752,GO:0032991,GO:0034641,GO:0034645,GO:0034660,GO:0043038,GO:0043039,GO:0043043,GO:0043170,GO:0043436,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044281,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0071704,GO:0090304,GO:1901360,GO:1901564,GO:1901566,GO:1901576,GO:1902494 6.1.1.20 1.487e-230 726.0
DYD2_k127_6584531_0 - - - - 0.000000000000000000000000000000000000000000000000000000000000000000003021 249.0
DYD2_k127_6584531_1 Peptide chain release factor 2 directs the termination of translation in response to the peptide chain termination codons UGA and UAA K02836 - - 0.00000000000000000000000000000000000000000004925 163.0
DYD2_k127_6593484_0 PFAM Cation transport protein K03498 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005252 588.0
DYD2_k127_6593484_1 TIGRFAM mannose-1-phosphate guanylyltransferase mannose-6-phosphate isomerase K00971 - 2.7.7.13 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000205 483.0
DYD2_k127_6593484_2 Belongs to the SIS family. GutQ KpsF subfamily K06041 - 5.3.1.13 0.00000000000000009143 80.0
DYD2_k127_6601271_0 The beta subunit is responsible for the synthesis of L- tryptophan from indole and L-serine K01696,K01817 - 4.2.1.20,5.3.1.24 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002298 589.0
DYD2_k127_6601271_1 Belongs to the TrpC family K01609 GO:0003674,GO:0003824,GO:0004425,GO:0016829,GO:0016830,GO:0016831 4.1.1.48 0.00000000000000000000000000000000000000000000000000000000000000000000000018 251.0
DYD2_k127_6601271_2 Belongs to the TrpF family K01817 - 5.3.1.24 0.00000000000000000000000000000000000000000000000000000000000000006542 227.0
DYD2_k127_6606481_0 Belongs to the iron ascorbate-dependent oxidoreductase family - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004166 532.0
DYD2_k127_6606481_1 TIGRFAM chromate transporter, chromate ion transporter (CHR) family K07240 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005146 524.0
DYD2_k127_6624730_0 Sortilin, neurotensin receptor 3, - - - 0.0000000000000000000000000000000000000000000000000000000002346 211.0
DYD2_k127_6624730_1 - - - - 0.0000000000000000000000000000000000000000000001208 180.0
DYD2_k127_6625427_0 Catalyzes the sequential NAD-dependent oxidations of L- histidinol to L-histidinaldehyde and then to L-histidine K00013 GO:0000105,GO:0003674,GO:0003824,GO:0004399,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006082,GO:0006520,GO:0006547,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0008652,GO:0009058,GO:0009987,GO:0016053,GO:0016491,GO:0016614,GO:0016616,GO:0018130,GO:0019438,GO:0019752,GO:0034641,GO:0043436,GO:0044237,GO:0044238,GO:0044249,GO:0044281,GO:0044283,GO:0044424,GO:0044444,GO:0044464,GO:0046394,GO:0046483,GO:0052803,GO:0055114,GO:0071704,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576,GO:1901605,GO:1901607 1.1.1.23 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001211 563.0
DYD2_k127_6625427_1 ATP phosphoribosyltransferase K00765 GO:0000105,GO:0003674,GO:0003824,GO:0003879,GO:0006082,GO:0006520,GO:0006547,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0008652,GO:0009058,GO:0009987,GO:0016053,GO:0016740,GO:0016757,GO:0016763,GO:0018130,GO:0019438,GO:0019752,GO:0034641,GO:0043436,GO:0044237,GO:0044238,GO:0044249,GO:0044281,GO:0044283,GO:0046394,GO:0046483,GO:0052803,GO:0071704,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576,GO:1901605,GO:1901607 2.4.2.17 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005523 400.0
DYD2_k127_6625427_2 Methyltransferase domain - - - 0.0000000000000000000000000000000000000000000000000000000000000001018 223.0
DYD2_k127_6625427_3 Belongs to the class-II pyridoxal-phosphate-dependent aminotransferase family. Histidinol-phosphate aminotransferase subfamily K00817 - 2.6.1.9 0.0000000000000000000000000000007674 123.0
DYD2_k127_6637017_0 Destroys radicals which are normally produced within the cells and which are toxic to biological systems K04564 - 1.15.1.1 0.0000000000000000000000000000000000000000000000000000000000000000000003219 238.0
DYD2_k127_6637017_1 Acetyltransferase (GNAT) domain K03827,K18815 - 2.3.1.82 0.000000000000000000000000000000000000000002148 160.0
DYD2_k127_6643905_0 Catalyzes the reversible phosphatidyl group transfer from one phosphatidylglycerol molecule to another to form cardiolipin (CL) (diphosphatidylglycerol) and glycerol K06132 - - 8.93e-218 686.0
DYD2_k127_6643905_1 Amino acid permease K03294 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009111 539.0
DYD2_k127_6643905_2 COG4638 Phenylpropionate dioxygenase and related ring-hydroxylating dioxygenases, large terminal subunit K00499 - 1.14.15.7 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002086 419.0
DYD2_k127_6643905_3 AntiSigma factor - - - 0.00000000000000004794 90.0
DYD2_k127_6643905_4 - - - - 0.00000000000003877 74.0
DYD2_k127_6649589_0 magnesium chelatase K03405 - 6.6.1.1 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009794 518.0
DYD2_k127_6649589_1 von Willebrand factor, type A - - - 0.000000000000000000000000000000000000000000000000000000001097 201.0
DYD2_k127_6651355_0 Catalyzes the ATP-dependent conversion of 5- aminoimidazole ribonucleotide (AIR) and HCO(3)(-) to N5- carboxyaminoimidazole ribonucleotide (N5-CAIR) K01589 - 6.3.4.18 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002466 527.0
DYD2_k127_6651355_1 Belongs to the peptidase S41A family K03797 - 3.4.21.102 0.00000000000000000000000000000000000000000000005378 176.0
DYD2_k127_6651355_2 Catalyzes the conversion of N5-carboxyaminoimidazole ribonucleotide (N5-CAIR) to 4-carboxy-5-aminoimidazole ribonucleotide (CAIR) K01588 - 5.4.99.18 0.0000000000000000000000000001238 117.0
DYD2_k127_665189_0 PFAM YicC-like family, N-terminal region - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008104 310.0
DYD2_k127_665189_1 Involved in the tonB-independent uptake of proteins - - - 0.000000000000000000000000000000000000000000000000000000000000003967 222.0
DYD2_k127_665189_2 Interacts with outer membrane receptor proteins that carry out high-affinity binding and energy dependent uptake into the periplasmic space of specific substrates. It could act to transduce energy from the cytoplasmic membrane to specific energy- requiring processes in the outer membrane, resulting in the release into the periplasm of ligands bound by these outer membrane proteins K03832 - - 0.000000000000000000000000000000000000000005838 162.0
DYD2_k127_6653121_0 TIGRFAM dihydroorotase, multifunctional complex type K01465 - 3.5.2.3 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002266 362.0
DYD2_k127_6653121_1 Catalyzes the phosphorylation of the 3'-hydroxyl group of dephosphocoenzyme A to form coenzyme A K00859 GO:0003674,GO:0003824,GO:0004140,GO:0006139,GO:0006163,GO:0006164,GO:0006725,GO:0006732,GO:0006753,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009108,GO:0009117,GO:0009150,GO:0009152,GO:0009165,GO:0009259,GO:0009260,GO:0009987,GO:0015936,GO:0015937,GO:0016301,GO:0016310,GO:0016740,GO:0016772,GO:0016773,GO:0018130,GO:0019438,GO:0019637,GO:0019693,GO:0033865,GO:0033866,GO:0033875,GO:0034030,GO:0034032,GO:0034033,GO:0034641,GO:0034654,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0046390,GO:0046483,GO:0051186,GO:0051188,GO:0055086,GO:0071704,GO:0072521,GO:0072522,GO:0090407,GO:1901135,GO:1901137,GO:1901293,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576 2.7.1.24 0.000000000000000000000000000000000000000000000000000000000000000004823 230.0
DYD2_k127_6653121_2 YbbR-like protein - - - 0.0000000000000000000000000000000000000000000000000000000000009072 221.0
DYD2_k127_6653121_3 - - - - 0.00000000000000000000002807 103.0
DYD2_k127_6653121_4 TIGRFAM preprotein translocase, YajC subunit K03210 - - 0.00000000000000001632 83.0
DYD2_k127_6664303_0 belongs to the imidazoleglycerol-phosphate dehydratase family K01089,K01693 GO:0000105,GO:0003674,GO:0003824,GO:0004424,GO:0006082,GO:0006520,GO:0006547,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0008652,GO:0009058,GO:0009987,GO:0016053,GO:0016829,GO:0016835,GO:0016836,GO:0018130,GO:0019438,GO:0019752,GO:0034641,GO:0043436,GO:0044237,GO:0044238,GO:0044249,GO:0044281,GO:0044283,GO:0046394,GO:0046483,GO:0052803,GO:0071704,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576,GO:1901605,GO:1901607 3.1.3.15,4.2.1.19 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003165 343.0
DYD2_k127_6664303_1 DNA polymerase K02337 - 2.7.7.7 0.00000000000000000000000000000000001372 138.0
DYD2_k127_6668511_0 Nitrous oxide reductase K00376 - 1.7.2.4 1.591e-217 678.0
DYD2_k127_6668511_1 lipoprotein involved in nitrous oxide reduction K19342 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000005188 285.0
DYD2_k127_6668511_2 NosL K19342 - - 0.00000000000000008566 81.0
DYD2_k127_667086_0 Psort location OuterMembrane, score - - - 0.000000000000000000000000000000000000000000000221 175.0
DYD2_k127_667086_1 Tetratricopeptide repeat - - - 0.00000000000000000000000000000000001487 139.0
DYD2_k127_6676157_0 PFAM Dienelactone hydrolase family K01061 - 3.1.1.45 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001341 306.0
DYD2_k127_6676157_1 DinB family - - - 0.000000000000000000000000000002555 124.0
DYD2_k127_6676157_2 TonB-dependent Receptor Plug Domain - - - 0.0000000000000000000000000001794 115.0
DYD2_k127_6684394_0 CheY-like receiver AAA-type ATPase and DNA-binding domains - - - 4.612e-238 743.0
DYD2_k127_6684394_1 PFAM Alanine dehydrogenase PNT, C-terminal domain K00259 - 1.4.1.1 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004952 580.0
DYD2_k127_6684394_2 PFAM Uncharacterised P-loop hydrolase UPF0079 K06925 - - 0.000000000000000000000000000000000000000001153 160.0
DYD2_k127_6685246_0 Belongs to the metallo-dependent hydrolases superfamily. Adenine deaminase family K01486 - 3.5.4.2 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003615 506.0
DYD2_k127_6685246_1 Belongs to the cytidylate kinase family. Type 1 subfamily K00945 GO:0003674,GO:0003824,GO:0004127,GO:0004592,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006082,GO:0006139,GO:0006520,GO:0006573,GO:0006575,GO:0006725,GO:0006732,GO:0006753,GO:0006766,GO:0006767,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009081,GO:0009108,GO:0009110,GO:0009117,GO:0009123,GO:0009165,GO:0009987,GO:0015939,GO:0015940,GO:0016053,GO:0016301,GO:0016310,GO:0016740,GO:0016772,GO:0016776,GO:0016874,GO:0016879,GO:0016881,GO:0018130,GO:0019205,GO:0019438,GO:0019637,GO:0019752,GO:0032787,GO:0033317,GO:0034641,GO:0034654,GO:0042364,GO:0042398,GO:0043436,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0044283,GO:0044424,GO:0044444,GO:0044464,GO:0046394,GO:0046483,GO:0046939,GO:0046940,GO:0050145,GO:0051186,GO:0051188,GO:0055086,GO:0071704,GO:0072330,GO:0090407,GO:1901293,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576,GO:1901605 2.7.4.25 0.000000000000000000000000000000000000000000000000000000000000000000006176 237.0
DYD2_k127_6689133_0 Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family K03296,K18138 - - 1.366e-265 831.0
DYD2_k127_6689133_1 Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family K03585 - - 0.000000000000007538 76.0
DYD2_k127_6696190_0 Belongs to the alkaline phosphatase family K01077 - 3.1.3.1 0.0000000000000000000000000000000000000000000000000000000000000000000000000001197 265.0
DYD2_k127_6696190_1 - - - - 0.00000000000000001206 89.0
DYD2_k127_6709142_0 Peptidase M1, membrane alanine aminopeptidase K01256 - 3.4.11.2 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001498 456.0
DYD2_k127_6709142_1 Specifically catalyzes the decarboxylation of meso- diaminopimelate (meso-DAP) to L-lysine K01586 - 4.1.1.20 0.00000000000000000000000000000000000000000000000000000000000000000000000000000381 265.0
DYD2_k127_6714703_0 His Kinase A (phosphoacceptor) domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000005761 278.0
DYD2_k127_6714703_1 protein phosphatase 2C domain protein - - - 0.00000000000000000000000001243 126.0
DYD2_k127_6716965_0 OmpA family K02557 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001921 304.0
DYD2_k127_6716965_1 DNA RNA non-specific endonuclease K01173 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000006633 273.0
DYD2_k127_6716965_2 PFAM Phosphoglycerate mutase K08296 - - 0.0000000000000000000000000000000000000000000000004479 180.0
DYD2_k127_6717207_0 fatty acid desaturase K00508 - 1.14.19.3 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004239 372.0
DYD2_k127_6717207_1 Belongs to the sodium neurotransmitter symporter (SNF) (TC 2.A.22) family K03308 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002301 351.0
DYD2_k127_6717207_2 Transcriptional regulator, asnc family K03718 - - 0.00000009989 53.0
DYD2_k127_6720384_0 Involved in the TCA cycle. Catalyzes the stereospecific interconversion of fumarate to L-malate K01679 - 4.2.1.2 1.317e-207 648.0
DYD2_k127_6720384_1 single-stranded-DNA-specific exonuclease RecJ K07462 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003473 389.0
DYD2_k127_6720384_2 - - - - 0.000000000000000000000000000000000000000000000002062 180.0
DYD2_k127_6728055_0 Domain present in phytochromes and cGMP-specific phosphodiesterases. - - - 0.000000000000000000000000000000000000000000000000005533 188.0
DYD2_k127_6731887_0 PFAM Carbamoyl-phosphate synthase L chain, ATP binding K01955 - 6.3.5.5 2.508e-246 764.0
DYD2_k127_6731887_1 Parallel beta-helix repeats - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008099 443.0
DYD2_k127_6736240_0 Glycosyl hydrolases family 2, sugar binding domain K01192 - 3.2.1.25 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001172 508.0
DYD2_k127_6741586_0 Cysteine-rich secretory protein family - - - 0.00000000000000000000000000000000000000000000002695 175.0
DYD2_k127_6741586_1 Cysteine-rich secretory protein family - - - 0.00000000000000000000000000000000000000003545 161.0
DYD2_k127_6744960_0 PFAM Pyridoxal-dependent decarboxylase, C-terminal sheet domain K01585 - 4.1.1.19 1.406e-250 779.0
DYD2_k127_6744960_1 Belongs to the arginase family K01476,K01480 - 3.5.3.1,3.5.3.11 0.000000000000000000000000000000000000000000000000000000000000000000000000000000002865 276.0
DYD2_k127_6744960_2 membrane - - - 0.0000000000000000000000000000000000000000000000000000000000000000002047 235.0
DYD2_k127_6744960_3 transcriptional regulator - - - 0.0000000000000000000001313 97.0
DYD2_k127_6746893_0 Alpha/beta hydrolase family K01563,K22318 - 3.8.1.5 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005671 359.0
DYD2_k127_6746893_1 DNA repair enzyme that has both DNA N-glycosylase activity and AP-lyase activity. The DNA N-glycosylase activity releases various damaged pyrimidines from DNA by cleaving the N- glycosidic bond, leaving an AP (apurinic apyrimidinic) site. The AP-lyase activity cleaves the phosphodiester bond 3' to the AP site by a beta-elimination, leaving a 3'-terminal unsaturated sugar and a product with a terminal 5'-phosphate K10773 - 4.2.99.18 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000725 342.0
DYD2_k127_6746893_2 - - - - 0.0000000000000000000000000000000000000000002702 178.0
DYD2_k127_6746893_3 PFAM Cyclic nucleotide-binding domain - - - 0.0000007037 50.0
DYD2_k127_680380_0 Alanine racemase, C-terminal domain K01775 - 5.1.1.1 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006525 399.0
DYD2_k127_680380_1 amino acid racemase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008519 364.0
DYD2_k127_680380_2 PFAM Peptidase family M20 M25 M40 - - - 0.0000000000000000000000000000001079 126.0
DYD2_k127_684416_0 Belongs to the class IV-like SAM-binding methyltransferase superfamily. RNA methyltransferase TrmH family K03218,K03437 - 2.1.1.185 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001228 315.0
DYD2_k127_684416_1 - - - - 0.000000000009499 67.0
DYD2_k127_685384_0 Electron transfer flavoprotein K03521 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002337 405.0
DYD2_k127_685384_1 HemY protein - - - 0.0000000000000000000000000001504 117.0
DYD2_k127_685384_2 Electron transfer flavoprotein, alpha subunit K03522 - - 0.0000000000000000000000566 101.0
DYD2_k127_685384_3 - - - - 0.000222 48.0
DYD2_k127_688280_0 3-demethylubiquinone-9 3-methyltransferase - - - 0.00000000000000000000000000000000000000000000000000000002691 201.0
DYD2_k127_688280_1 methyltransferase - - - 0.0000000000000001402 81.0
DYD2_k127_688280_2 glyoxalase bleomycin resistance protein dioxygenase K07032 - - 0.0000000000004241 69.0
DYD2_k127_703160_0 tetratricopeptide repeat - - - 7.885e-214 700.0
DYD2_k127_718684_0 TIGRFAM PAS sensor protein - - - 0.0000000000000000000000000000000000000000000007625 174.0
DYD2_k127_718684_1 GGDEF domain K01584,K02488,K07720 - 2.7.7.65,4.1.1.19 0.000000000000000000000003755 104.0
DYD2_k127_720703_0 CinA-like protein K03742,K03743 - 3.5.1.42 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001452 534.0
DYD2_k127_720703_1 Peptide chain release factor 1 K15034 - - 0.00000000000000000000000000001494 122.0
DYD2_k127_720703_2 Dihydrolipoamide acetyltransferase component of pyruvate dehydrogenase complex K00658 - 2.3.1.61 0.000000000000000002946 84.0
DYD2_k127_724790_0 His Kinase A (phosphoacceptor) domain - - - 0.00000000000000000000000000000000000000000004213 177.0
DYD2_k127_725998_0 ABC-2 type transporter K21397 - - 0.0 1257.0
DYD2_k127_725998_1 Sigma factor PP2C-like phosphatases - - - 1.632e-276 859.0
DYD2_k127_725998_2 - - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000003338 296.0
DYD2_k127_725998_3 Domain of unknown function (DUF1987) - - - 0.00000000000000000000000000000000000000000000000000000000000000009237 222.0
DYD2_k127_732590_0 Y_Y_Y domain - - - 0.000000000000000000000000000000000000000000000000000000002412 215.0
DYD2_k127_738124_0 TonB dependent receptor K02014 - - 9.889e-194 614.0
DYD2_k127_748414_0 COGs COG0604 NADPH quinone reductase and related Zn-dependent oxidoreductase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002015 422.0
DYD2_k127_750466_0 Psort location Cytoplasmic, score 8.96 - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004699 324.0
DYD2_k127_750779_0 bacterial surface protein 26-residue repeat - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001139 604.0
DYD2_k127_753918_0 Voltage gated chloride channel K03281 - - 8.057e-252 788.0
DYD2_k127_753918_1 Nucleotidyl transferase K00973 - 2.7.7.24 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001914 316.0
DYD2_k127_753918_2 alkyl hydroperoxide reductase Thiol specific antioxidant Mal allergen - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000002259 258.0
DYD2_k127_753918_3 Thioredoxin - - - 0.000000000000000000000000000000000000000000369 162.0
DYD2_k127_760359_0 Belongs to the NadC ModD family K00767 - 2.4.2.19 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005463 388.0
DYD2_k127_760359_1 receptor - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002264 352.0
DYD2_k127_760359_2 Small Multidrug Resistance protein K11741 - - 0.000000000000000000000000000000000000000000000000005699 182.0
DYD2_k127_775726_0 Integrin alpha (beta-propellor repeats). - - - 0.0000000000000001024 96.0
DYD2_k127_775726_2 Cadherin repeats. - - - 0.0000004761 64.0
DYD2_k127_780668_0 GHKL domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006272 471.0
DYD2_k127_780668_1 UbiA prenyltransferase family K02548 - 2.5.1.74 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000001114 293.0
DYD2_k127_780668_2 Nicotinate-nucleotide adenylyltransferase - - - 0.000000000000000000000001994 105.0
DYD2_k127_79736_0 Acyl-CoA dehydrogenase, middle domain K00232 - 1.3.3.6 0.0000000000000000000000000000000000000000000000000000000000000000000000000009379 262.0
DYD2_k127_802829_0 ATPases associated with a variety of cellular activities K02003 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001964 334.0
DYD2_k127_802829_1 - - - - 0.0000000000000000000000000000000963 128.0
DYD2_k127_804392_0 - - - - 0.0000000000000000000000000000000000000000002083 162.0
DYD2_k127_804392_1 Domain of unknown function (DUF4386) - - - 0.00000000000000000000000000000000000004254 143.0
DYD2_k127_804392_2 Belongs to the DEAD box helicase family K11927 - 3.6.4.13 0.0000000000000004046 78.0
DYD2_k127_809415_0 PFAM Cytochrome c assembly protein K02195 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006698 356.0
DYD2_k127_809415_1 ABC-type transport system involved in cytochrome c biogenesis permease component K02194 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000001318 289.0
DYD2_k127_809415_2 - - - - 0.000000008913 67.0
DYD2_k127_809415_3 - - - - 0.00000004255 55.0
DYD2_k127_810140_0 PFAM Glycosyl transferase family 2 - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003017 361.0
DYD2_k127_810140_1 rejects L-amino acids rather than detecting D-amino acids in the active site. By recycling D-aminoacyl-tRNA to D-amino acids and free tRNA molecules, this enzyme counteracts the toxicity associated with the formation of D-aminoacyl-tRNA entities in vivo and helps enforce protein L-homochirality K07560 GO:0002161,GO:0003674,GO:0003824,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006139,GO:0006399,GO:0006450,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0009987,GO:0016070,GO:0016787,GO:0016788,GO:0034641,GO:0034660,GO:0043170,GO:0044237,GO:0044238,GO:0044424,GO:0044464,GO:0046483,GO:0051499,GO:0051500,GO:0052689,GO:0065007,GO:0065008,GO:0071704,GO:0090304,GO:0106074,GO:0140098,GO:0140101,GO:1901360 - 0.000000000000000000000000000000000000000000000000000000000000001037 221.0
DYD2_k127_810140_2 epimerase - - - 0.00000000000000000000000000000000000000000000000000000000000005722 220.0
DYD2_k127_810140_3 - - - - 0.00000000000000000000000000000000000000000000000000000142 196.0
DYD2_k127_810140_4 PFAM MazG nucleotide pyrophosphohydrolase - - - 0.0000000000000000000000000000000000000000000000000006054 185.0
DYD2_k127_810140_5 YceI-like domain - - - 0.000000000000000000000000000000000000000000000000002605 188.0
DYD2_k127_810140_6 Belongs to the HesB IscA family K13628 - - 0.00000000000000000000000000000000001141 138.0
DYD2_k127_817124_0 Responsible for synthesis of pseudouridine from uracil K06180 - 5.4.99.23 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006365 304.0
DYD2_k127_817124_1 Tellurite resistance protein TerB - - - 0.000000000000008024 80.0
DYD2_k127_817124_2 Tellurite resistance protein TerB - - - 0.0000000000000106 79.0
DYD2_k127_819922_0 PFAM LemA family K03744 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001199 321.0
DYD2_k127_819922_1 TPM domain - - - 0.0000000000000000000000000000000000000000000000000000002963 196.0
DYD2_k127_819922_2 Methanol dehydrogenase K06872 - - 0.00002093 53.0
DYD2_k127_825588_0 Methionine biosynthesis protein MetW - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000001016 282.0
DYD2_k127_830461_0 Cleaved Adhesin Domain - - - 0.00000000000000000000000000000005646 145.0
DYD2_k127_830461_1 Belongs to the peptidase S8 family K01183 - 3.2.1.14 0.000007613 59.0
DYD2_k127_830461_2 Serine aminopeptidase, S33 K06889 - - 0.0002115 47.0
DYD2_k127_830461_3 Forms passive diffusion pores that allow small molecular weight hydrophilic materials across the outer membrane K01387,K14645 - 3.4.24.3 0.0008314 53.0
DYD2_k127_831401_0 FtsX-like permease family - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001651 610.0
DYD2_k127_842445_0 PFAM PHP domain K02347 - - 3.072e-196 627.0
DYD2_k127_842445_1 Rhodanese Homology Domain K01011 - 2.8.1.1,2.8.1.2 0.000000000000000000000000000000000000000000000000002924 185.0
DYD2_k127_842445_2 YceI-like domain - - - 0.00000000000000000000000000000000000002043 157.0
DYD2_k127_843585_0 Endoribonuclease that initiates mRNA decay K18682 - - 7.197e-258 804.0
DYD2_k127_843585_1 Belongs to the phenylalanyl-tRNA synthetase beta subunit family. Type 1 subfamily K01890 GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006082,GO:0006139,GO:0006399,GO:0006412,GO:0006418,GO:0006432,GO:0006518,GO:0006520,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009328,GO:0009987,GO:0010467,GO:0016070,GO:0019538,GO:0019752,GO:0032991,GO:0034641,GO:0034645,GO:0034660,GO:0043038,GO:0043039,GO:0043043,GO:0043170,GO:0043436,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044281,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0071704,GO:0090304,GO:1901360,GO:1901564,GO:1901566,GO:1901576,GO:1902494 6.1.1.20 0.0000000000000000000000000000000000000000000000000000000000001151 218.0
DYD2_k127_843585_2 Activator of cell division through the inhibition of FtsZ GTPase activity, therefore promoting FtsZ assembly into bundles of protofilaments necessary for the formation of the division Z ring. It is recruited early at mid-cell but it is not essential for cell division K09888 - - 0.000000000000000000000000000000000002728 139.0
DYD2_k127_843585_3 endoribonuclease L-PSP - - - 0.00000000000000000000000000008688 116.0
DYD2_k127_843585_4 - - - - 0.000000000000000000000004299 104.0
DYD2_k127_848528_0 Involved in mRNA degradation. Catalyzes the phosphorolysis of single-stranded polyribonucleotides processively in the 3'- to 5'-direction K00962 - 2.7.7.8 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004943 589.0
DYD2_k127_848528_1 Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released K03086 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001871 533.0
DYD2_k127_848528_2 Thioredoxin reductase K00384 - 1.8.1.9 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002586 395.0
DYD2_k127_849681_0 PFAM thioesterase superfamily - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000005024 270.0
DYD2_k127_849681_1 Catalyzes the methyl esterification of L-isoaspartyl residues in peptides and proteins that result from spontaneous decomposition of normal L-aspartyl and L-asparaginyl residues. It plays a role in the repair and or degradation of damaged proteins K00573 - 2.1.1.77 0.000000000000000000000000000000000000004015 147.0
DYD2_k127_849681_2 domain, Protein - - - 0.000002001 56.0
DYD2_k127_888882_0 CBS domain K03699 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005542 495.0
DYD2_k127_890484_0 Protein of unknown function (DUF3108) - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000004869 297.0
DYD2_k127_890484_1 alpha beta - - - 0.0000000000000000000000000000000000000000000000000000000000000002434 228.0
DYD2_k127_894738_0 Esterase of the alpha-beta hydrolase superfamily - - - 2.093e-228 724.0
DYD2_k127_89793_0 ABC-2 type transporter - - - 1.9e-205 652.0
DYD2_k127_89793_1 Bacterial PH domain - - - 0.000000000000000000000000000000000000000006134 158.0
DYD2_k127_89833_0 Polysaccharide deacetylase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007497 442.0
DYD2_k127_89833_1 - - - - 0.000000000000000000000000000000000000000000000000000000000000000000005233 241.0
DYD2_k127_914087_0 Belongs to the class I-like SAM-binding methyltransferase superfamily. RsmB NOP family K03500 - 2.1.1.176 0.00000000000000000000000000000000000000000001646 166.0
DYD2_k127_921684_0 Two component regulator propeller - - - 0.0000000000000000000000000000000000000000000000000000000000000008286 236.0
DYD2_k127_921684_1 PFAM Pterin 4 alpha carbinolamine dehydratase K01724 - 4.2.1.96 0.000000000000000000000000000000002968 129.0
DYD2_k127_923711_0 Produces ATP from ADP in the presence of a proton gradient across the membrane. The catalytic sites are hosted primarily by the beta subunits K02112 - 3.6.3.14 4.502e-223 694.0
DYD2_k127_923711_1 Histidine kinase - - - 0.0000000000000000000000000002141 115.0
DYD2_k127_927698_0 PFAM Outer membrane efflux protein - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003316 309.0
DYD2_k127_927698_1 Biotin-lipoyl like - - - 0.00000000000000000000000000000000000000000000000000000000000002886 216.0
DYD2_k127_930419_0 Histidine kinase - - - 0.000000000000000000000000000000000000000000000001222 188.0
DYD2_k127_939323_0 Belongs to the UPF0758 family K03630 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005162 321.0
DYD2_k127_939323_1 S1 P1 nuclease - - - 0.00000000000000000000000000000000000000000001008 166.0
DYD2_k127_939323_2 Protein of unknown function (DUF1684) K09164 - - 0.00000000000000000000000000000000000001219 150.0
DYD2_k127_939323_3 Binds directly to 16S ribosomal RNA K02968 - - 0.000000000000000000000000000000004391 129.0
DYD2_k127_968335_0 PFAM Amidohydrolase 2 - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000277 523.0
DYD2_k127_968335_1 Poorly processive, error-prone DNA polymerase involved in untargeted mutagenesis. Copies undamaged DNA at stalled replication forks, which arise in vivo from mismatched or misaligned primer ends. These misaligned primers can be extended by PolIV. Exhibits no 3'-5' exonuclease (proofreading) activity. May be involved in translesional synthesis, in conjunction with the beta clamp from PolIII K02346 - 2.7.7.7 0.000000000000000000000000000000000000000000006113 168.0
DYD2_k127_968335_2 Cold-shock protein K03704 - - 0.00000000000000000000000002453 110.0
DYD2_k127_981881_0 Chaperone involved in the correct folding and assembly of outer membrane proteins. Recognizes specific patterns of aromatic residues and the orientation of their side chains, which are found more frequently in integral outer membrane proteins. May act in both early periplasmic and late outer membrane-associated steps of protein maturation - - - 0.0000000000000000000000000000009888 123.0
DYD2_k127_981881_1 peptidyl-prolyl isomerase K03771 - 5.2.1.8 0.000000000000000000000001509 107.0
DYD2_k127_981881_2 Chaperone involved in the correct folding and assembly of outer membrane proteins. Recognizes specific patterns of aromatic residues and the orientation of their side chains, which are found more frequently in integral outer membrane proteins. May act in both early periplasmic and late outer membrane-associated steps of protein maturation - - - 0.0000000000000000000002253 100.0
DYD2_k127_98554_0 Catalyzes the conversion of inosine 5'-phosphate (IMP) to xanthosine 5'-phosphate (XMP), the first committed and rate- limiting step in the de novo synthesis of guanine nucleotides, and therefore plays an important role in the regulation of cell growth K00088 - 1.1.1.205 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001446 477.0
DYD2_k127_98554_1 - - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001761 305.0
DYD2_k127_98554_2 Ribosomal protein L31 K02909 - - 0.00000000000000000000000000000001282 127.0
DYD2_k127_987275_0 Outer membrane protein protective antigen OMA87 - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005983 433.0
DYD2_k127_990770_0 ABC transporter K06158 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006154 587.0
DYD2_k127_99136_0 PFAM Peptidase M16 inactive domain K07263 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002011 513.0
DYD2_k127_99136_1 ABC transporter transmembrane region K11085 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006332 505.0