Overview

ID MAG00923
Name DYD2_bin.47
Sample SMP0026
Taxonomy
Kingdom Archaea
Phylum Thermoplasmatota
Class E2
Order JACPAO01
Family JACPAO01
Genus JACPAO01
Species
Assembly information
Completeness (%) 84.73
Contamination (%) 1.72
GC content (%) 63.0
N50 (bp) 11,879
Genome size (bp) 2,916,890

Location

Module

Module ID Module name Total genes Total steps Contain genes Contain steps Percentage of genes Percentage of steps

Genes2197

Gene name Description KEGG GOs EC E-value Score Sequence
DYD2_k127_1006632_0 AAA domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001602 333.0
DYD2_k127_1006632_1 O-methyltransferase - - - 0.00000000000000000000000000000000000009949 144.0
DYD2_k127_1006632_2 Subtilase family K17734 - - 0.000000000000000000000000000000000003714 143.0
DYD2_k127_1014936_0 Belongs to the universal ribosomal protein uS9 family K02996 - - 0.0000000000000000000000000000000000000000000003609 169.0
DYD2_k127_1014936_1 Methyltransferase domain - - - 0.00000000000000000000000000000003187 132.0
DYD2_k127_1014936_3 Belongs to the eukaryotic ribosomal protein eL18 family K02883 - - 0.00000000000000000000000000003354 122.0
DYD2_k127_1014936_4 This protein is one of the early assembly proteins of the 50S ribosomal subunit, although it is not seen to bind rRNA by itself. It is important during the early stages of 50S assembly K02871 - - 0.000000000000000000003553 104.0
DYD2_k127_1014936_5 DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates K03058 GO:0000428,GO:0003674,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0008270,GO:0030880,GO:0032991,GO:0043167,GO:0043169,GO:0044424,GO:0044464,GO:0046872,GO:0046914,GO:0061695,GO:1902494,GO:1990234 2.7.7.6 0.00000000000000002505 86.0
DYD2_k127_1014936_6 DNA recombination K09760 - - 0.000000000000005222 87.0
DYD2_k127_1014936_7 Transcriptional regulator - - - 0.000000003222 66.0
DYD2_k127_1033844_0 von Willebrand factor (vWF) type A domain - GO:0005575,GO:0005623,GO:0005886,GO:0016020,GO:0044464,GO:0071944 - 0.00002938 53.0
DYD2_k127_1041551_0 Anticodon-binding domain of tRNA K01873 - 6.1.1.9 9.272e-212 677.0
DYD2_k127_1041551_1 Heme-dependent dioxygenase that catalyzes the oxidative cleavage of the L-tryptophan (L-Trp) pyrrole ring and converts L- tryptophan to N-formyl-L-kynurenine. Catalyzes the oxidative cleavage of the indole moiety K00453 GO:0003674,GO:0003824,GO:0004833,GO:0005488,GO:0006082,GO:0006520,GO:0006568,GO:0006569,GO:0006576,GO:0006586,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0009056,GO:0009063,GO:0009072,GO:0009074,GO:0009308,GO:0009310,GO:0009987,GO:0016043,GO:0016054,GO:0016491,GO:0016701,GO:0016702,GO:0019439,GO:0019441,GO:0019752,GO:0020037,GO:0022607,GO:0034641,GO:0042180,GO:0042402,GO:0042430,GO:0042436,GO:0042537,GO:0043436,GO:0043933,GO:0044085,GO:0044106,GO:0044237,GO:0044238,GO:0044248,GO:0044270,GO:0044281,GO:0044282,GO:0046218,GO:0046395,GO:0046483,GO:0046700,GO:0046906,GO:0048037,GO:0051213,GO:0051259,GO:0051260,GO:0051262,GO:0051289,GO:0055114,GO:0065003,GO:0070189,GO:0071704,GO:0071840,GO:0097159,GO:1901360,GO:1901361,GO:1901363,GO:1901564,GO:1901565,GO:1901575,GO:1901605,GO:1901606 1.13.11.11 0.000000000000000000000000000000000000000000000000000000000000005835 231.0
DYD2_k127_1041551_2 Transcriptional regulator, ArsR family - - - 0.000000000000004144 87.0
DYD2_k127_1041551_3 Toxic component of a toxin-antitoxin (TA) module. An RNase K18828 - - 0.000005084 54.0
DYD2_k127_1041551_4 CarboxypepD_reg-like domain - - - 0.0003208 52.0
DYD2_k127_1054087_0 His Kinase A (phosphoacceptor) domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001328 417.0
DYD2_k127_1054087_1 Catalyzes the reversible phosphorylation of S-methyl-5'- thioinosine (MTI) to hypoxanthine and 5-methylthioribose-1- phosphate. Involved in the breakdown of S-methyl-5'-thioadenosine (MTA), a major by-product of polyamine biosynthesis. Catabolism of (MTA) occurs via deamination to MTI and phosphorolysis to hypoxanthine K00772 - 2.4.2.28 0.00000000000000000000000000000000000000000000000002853 188.0
DYD2_k127_1054087_2 Histidine kinase - - - 0.000000000000000000000000000000000000003802 154.0
DYD2_k127_1054087_3 Sodium/hydrogen exchanger family - - - 0.000000000000000000000000000000000003035 149.0
DYD2_k127_1054087_4 cheY-homologous receiver domain - - - 0.000000000000000000000000000000004885 134.0
DYD2_k127_1054087_5 - - - - 0.00000000000001758 76.0
DYD2_k127_1060572_0 Is required not only for elongation of protein synthesis but also for the initiation of all mRNA translation through initiator tRNA(fMet) aminoacylation K01874 GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006082,GO:0006139,GO:0006399,GO:0006412,GO:0006418,GO:0006518,GO:0006520,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0016070,GO:0019538,GO:0019752,GO:0034641,GO:0034645,GO:0034660,GO:0043038,GO:0043039,GO:0043043,GO:0043170,GO:0043436,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044281,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0071704,GO:0090304,GO:1901360,GO:1901564,GO:1901566,GO:1901576 6.1.1.10 4.731e-197 637.0
DYD2_k127_1060572_1 ATPases associated with a variety of cellular activities K02003 - - 0.00000000000000000000000000000000000000000000004415 182.0
DYD2_k127_1060572_2 MacB-like periplasmic core domain K09808 - - 0.00002562 57.0
DYD2_k127_1105731_0 Protein of unknown function (DUF1015) - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000003719 265.0
DYD2_k127_1105731_1 Bacterial transferase hexapeptide (six repeats) - - - 0.0001944 45.0
DYD2_k127_1107143_0 FAD dependent oxidoreductase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003708 380.0
DYD2_k127_1107143_1 Belongs to the sodium neurotransmitter symporter (SNF) (TC 2.A.22) family K03308 - - 0.0000000000000000000000000000000000000000000000000000000000000001095 238.0
DYD2_k127_1107143_2 LVIVD repeat - - - 0.00000000009655 74.0
DYD2_k127_1107143_3 repeat protein - - - 0.00007365 55.0
DYD2_k127_1144506_0 X-Pro dipeptidyl-peptidase C-terminal non-catalytic domain K06978 - - 0.00000000000000000000000000000000003358 154.0
DYD2_k127_1144506_1 metal-dependent phosphoesterases (PHP family) - - - 0.000000000000000000000000000187 127.0
DYD2_k127_1144506_2 exo-alpha-(2->6)-sialidase activity - - - 0.000000000000000000000000009076 125.0
DYD2_k127_1144506_3 Is required not only for elongation of protein synthesis but also for the initiation of all mRNA translation through initiator tRNA(fMet) aminoacylation K01874 GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006082,GO:0006139,GO:0006399,GO:0006412,GO:0006418,GO:0006518,GO:0006520,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0016070,GO:0019538,GO:0019752,GO:0034641,GO:0034645,GO:0034660,GO:0043038,GO:0043039,GO:0043043,GO:0043170,GO:0043436,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044281,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0071704,GO:0090304,GO:1901360,GO:1901564,GO:1901566,GO:1901576 6.1.1.10 0.0000000000000000005752 87.0
DYD2_k127_1144506_4 helix_turn_helix, Lux Regulon - - - 0.00000000001273 70.0
DYD2_k127_1144506_5 - - - - 0.00000000001338 68.0
DYD2_k127_1144506_6 Winged helix DNA-binding domain - - - 0.000000003532 62.0
DYD2_k127_1144506_7 (Hpt) domain K20976 - - 0.00003641 51.0
DYD2_k127_1146458_0 Catalyzes the anaerobic formation of alpha-ketobutyrate and ammonia from threonine in a two-step reaction. The first step involved a dehydration of threonine and a production of enamine intermediates (aminocrotonate), which tautomerizes to its imine form (iminobutyrate). Both intermediates are unstable and short- lived. The second step is the nonenzymatic hydrolysis of the enamine imine intermediates to form 2-ketobutyrate and free ammonia. In the low water environment of the cell, the second step is accelerated by RidA K01754 - 4.3.1.19 0.00000000000000000000000000000000000000000000000000000000000000000000000000000001147 278.0
DYD2_k127_1146458_1 LVIVD repeat - - - 0.000000000000000000001178 108.0
DYD2_k127_1146458_2 - - - - 0.000000001451 66.0
DYD2_k127_1158391_0 RNA-3'-phosphate cyclase activity K01974 GO:0003674,GO:0003824,GO:0003963,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0009975,GO:0016874,GO:0016886,GO:0044424,GO:0044464,GO:0140098 6.5.1.4 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000004638 309.0
DYD2_k127_1158391_1 Carboxypeptidase E K01292,K01294,K07752 GO:0001505,GO:0001956,GO:0003007,GO:0003205,GO:0003206,GO:0003208,GO:0003214,GO:0003231,GO:0003674,GO:0003824,GO:0004180,GO:0004181,GO:0004185,GO:0005102,GO:0005488,GO:0005515,GO:0005575,GO:0005576,GO:0005615,GO:0005622,GO:0005623,GO:0005737,GO:0005794,GO:0005886,GO:0006464,GO:0006508,GO:0006518,GO:0006807,GO:0006810,GO:0006811,GO:0006812,GO:0006836,GO:0006937,GO:0007154,GO:0007165,GO:0007166,GO:0007186,GO:0007218,GO:0007267,GO:0007268,GO:0007269,GO:0007271,GO:0007275,GO:0007507,GO:0007610,GO:0007631,GO:0008104,GO:0008150,GO:0008152,GO:0008233,GO:0008235,GO:0008236,GO:0008237,GO:0008238,GO:0008582,GO:0009056,GO:0009653,GO:0009887,GO:0009914,GO:0009987,GO:0010033,GO:0010035,GO:0010037,GO:0010467,GO:0010646,GO:0010647,GO:0010817,GO:0012505,GO:0012506,GO:0014055,GO:0014056,GO:0014057,GO:0015695,GO:0015696,GO:0015870,GO:0015893,GO:0016020,GO:0016055,GO:0016485,GO:0016486,GO:0016787,GO:0017171,GO:0019538,GO:0019904,GO:0022603,GO:0023051,GO:0023052,GO:0023056,GO:0023061,GO:0030070,GO:0030141,GO:0030424,GO:0030425,GO:0030536,GO:0030537,GO:0030659,GO:0030667,GO:0031045,GO:0031090,GO:0031410,GO:0031982,GO:0032222,GO:0032224,GO:0032501,GO:0032502,GO:0032879,GO:0032940,GO:0033036,GO:0034230,GO:0034613,GO:0034641,GO:0035690,GO:0036211,GO:0036477,GO:0040008,GO:0040012,GO:0040017,GO:0042043,GO:0042221,GO:0042445,GO:0042493,GO:0042995,GO:0043005,GO:0043025,GO:0043051,GO:0043167,GO:0043169,GO:0043170,GO:0043171,GO:0043204,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0043269,GO:0043270,GO:0043412,GO:0043603,GO:0044057,GO:0044058,GO:0044062,GO:0044087,GO:0044089,GO:0044237,GO:0044238,GO:0044248,GO:0044260,GO:0044267,GO:0044297,GO:0044421,GO:0044422,GO:0044424,GO:0044425,GO:0044433,GO:0044444,GO:0044446,GO:0044456,GO:0044459,GO:0044463,GO:0044464,GO:0045121,GO:0045202,GO:0045887,GO:0045927,GO:0046872,GO:0046879,GO:0046883,GO:0046887,GO:0046903,GO:0046914,GO:0046928,GO:0048513,GO:0048518,GO:0048519,GO:0048520,GO:0048521,GO:0048522,GO:0048583,GO:0048584,GO:0048638,GO:0048639,GO:0048731,GO:0048856,GO:0050789,GO:0050793,GO:0050794,GO:0050795,GO:0050803,GO:0050804,GO:0050806,GO:0050807,GO:0050839,GO:0050896,GO:0050897,GO:0051046,GO:0051047,GO:0051049,GO:0051050,GO:0051093,GO:0051094,GO:0051128,GO:0051130,GO:0051179,GO:0051234,GO:0051239,GO:0051240,GO:0051241,GO:0051588,GO:0051590,GO:0051604,GO:0051641,GO:0051649,GO:0051716,GO:0051952,GO:0051954,GO:0051960,GO:0051961,GO:0051962,GO:0051963,GO:0051965,GO:0060259,GO:0060341,GO:0060456,GO:0060688,GO:0061526,GO:0061837,GO:0065007,GO:0065008,GO:0070008,GO:0070011,GO:0070727,GO:0070887,GO:0071241,GO:0071244,GO:0071702,GO:0071704,GO:0071705,GO:0071944,GO:0072347,GO:0072359,GO:0072657,GO:0090257,GO:0090325,GO:0090326,GO:0097060,GO:0097447,GO:0097458,GO:0097708,GO:0098588,GO:0098589,GO:0098590,GO:0098805,GO:0098857,GO:0098916,GO:0099177,GO:0099503,GO:0099536,GO:0099537,GO:0099643,GO:0120025,GO:0120038,GO:0140096,GO:0198738,GO:1901142,GO:1901374,GO:1901564,GO:1901565,GO:1901575,GO:1901700,GO:1901701,GO:1903530,GO:1903532,GO:1903745,GO:1903998,GO:1903999,GO:1904396,GO:1904398,GO:1905114,GO:2000026,GO:2000172,GO:2000173,GO:2000252,GO:2000292,GO:2000294,GO:2001023,GO:2001025 3.4.17.10,3.4.17.22,3.4.17.3 0.0000003049 59.0
DYD2_k127_11868_0 The central subunit of the protein translocation channel SecYEG. Consists of two halves formed by TMs 1-5 and 6-10. These two domains form a lateral gate at the front which open onto the bilayer between TMs 2 and 7, and are clamped together by SecE at the back. The channel is closed by both a pore ring composed of hydrophobic SecY resides and a short helix (helix 2A) on the extracellular side of the membrane which forms a plug. The plug probably moves laterally to allow the channel to open. The ring and the pore may move independently K03076 GO:0005575,GO:0005623,GO:0005886,GO:0016020,GO:0044464,GO:0071944 - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009121 576.0
DYD2_k127_11868_1 glutamine synthetase K01915 - 6.3.1.2 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000192 492.0
DYD2_k127_11868_10 Binds to 23S rRNA. Forms part of two intersubunit bridges in the 70S ribosome K02874 GO:0003674,GO:0003676,GO:0003723,GO:0003735,GO:0005198,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0015934,GO:0019843,GO:0022625,GO:0022626,GO:0032991,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:0070180,GO:0097159,GO:1901363,GO:1990904 - 0.0000000000000000000000000000000000000000000000000003464 186.0
DYD2_k127_11868_11 One of the primary rRNA binding proteins, it binds directly to 16S rRNA central domain where it helps coordinate assembly of the platform of the 30S subunit K02994 - - 0.00000000000000000000000000000000000000000000000003165 181.0
DYD2_k127_11868_12 This protein binds to the 23S rRNA, and is important in its secondary structure. It is located near the subunit interface in the base of the L7 L12 stalk, and near the tRNA binding site of the peptidyltransferase center K02933 GO:0002181,GO:0003674,GO:0003676,GO:0003723,GO:0003735,GO:0005198,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0006412,GO:0006518,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0015934,GO:0019538,GO:0022625,GO:0022626,GO:0032991,GO:0034641,GO:0034645,GO:0043043,GO:0043170,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:0071704,GO:0097159,GO:1901363,GO:1901564,GO:1901566,GO:1901576,GO:1990904 - 0.00000000000000000000000000000000000000000000000007928 183.0
DYD2_k127_11868_13 This is 1 of the proteins that binds and probably mediates the attachment of the 5S RNA into the large ribosomal subunit, where it forms part of the central protuberance. In the 70S ribosome it contacts protein S13 of the 30S subunit (bridge B1b), connecting the 2 subunits K02931 - - 0.0000000000000000000000000000000000000000000000003268 184.0
DYD2_k127_11868_14 This is one of the proteins that binds and probably mediates the attachment of the 5S RNA into the large ribosomal subunit, where it forms part of the central protuberance K02881 GO:0000027,GO:0003674,GO:0003676,GO:0003723,GO:0003735,GO:0005198,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0006412,GO:0006518,GO:0006807,GO:0006996,GO:0008097,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0015934,GO:0016043,GO:0019538,GO:0019843,GO:0022607,GO:0022613,GO:0022618,GO:0022625,GO:0022626,GO:0032991,GO:0034622,GO:0034641,GO:0034645,GO:0042254,GO:0042255,GO:0042273,GO:0043043,GO:0043170,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043603,GO:0043604,GO:0043933,GO:0044085,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:0065003,GO:0070925,GO:0071704,GO:0071826,GO:0071840,GO:0097159,GO:1901363,GO:1901564,GO:1901566,GO:1901576,GO:1990904 - 0.00000000000000000000000000000000000000000000005062 174.0
DYD2_k127_11868_15 NmrA-like family K00329,K00356 - 1.6.5.3,1.6.99.3 0.00000000000000000000000000000000000000000001916 173.0
DYD2_k127_11868_16 Ribosomal protein L30 K02907 GO:0000463,GO:0000470,GO:0002181,GO:0003674,GO:0003676,GO:0003723,GO:0003735,GO:0005198,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0006139,GO:0006364,GO:0006396,GO:0006412,GO:0006518,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0015934,GO:0016070,GO:0016072,GO:0019538,GO:0022613,GO:0022625,GO:0022626,GO:0032991,GO:0034470,GO:0034641,GO:0034645,GO:0034660,GO:0042254,GO:0042273,GO:0043043,GO:0043170,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043603,GO:0043604,GO:0044085,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:0046483,GO:0071704,GO:0071840,GO:0090304,GO:0097159,GO:1901360,GO:1901363,GO:1901564,GO:1901566,GO:1901576,GO:1990904 - 0.000000000000000000000000000000000000001567 160.0
DYD2_k127_11868_17 AsnC family K03718 - - 0.000000000000000000000000000000000000006426 152.0
DYD2_k127_11868_18 One of the primary rRNA binding proteins, it binds specifically to the 5'-end of 16S ribosomal RNA K02961 GO:0003674,GO:0003735,GO:0005198,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0006412,GO:0006518,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0015935,GO:0019538,GO:0022626,GO:0022627,GO:0032991,GO:0034641,GO:0034645,GO:0043043,GO:0043170,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:0071704,GO:1901564,GO:1901566,GO:1901576,GO:1990904 - 0.00000000000000000000000000000000000001195 149.0
DYD2_k127_11868_19 Binds to the 23S rRNA K02885 - - 0.00000000000000000000000000000000000005962 152.0
DYD2_k127_11868_2 Carbon starvation protein K06200 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004063 488.0
DYD2_k127_11868_20 Belongs to the cytidylate kinase family. Type 2 subfamily K00945 - 2.7.4.25 0.0000000000000000000000000000000000002756 148.0
DYD2_k127_11868_21 Integral membrane protein DUF106 - - - 0.0000000000000000000000000002454 123.0
DYD2_k127_11868_22 transcription regulator activity - - - 0.000000000000000000000000007478 116.0
DYD2_k127_11868_23 Located at the polypeptide exit tunnel on the outside of the subunit K02895 GO:0002181,GO:0003674,GO:0003676,GO:0003723,GO:0003735,GO:0005198,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0006412,GO:0006518,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0015934,GO:0019538,GO:0022613,GO:0022625,GO:0022626,GO:0032991,GO:0034641,GO:0034645,GO:0042254,GO:0042273,GO:0043043,GO:0043170,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043603,GO:0043604,GO:0044085,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:0071704,GO:0071840,GO:0097159,GO:1901363,GO:1901564,GO:1901566,GO:1901576,GO:1990904 - 0.000000000000000000000000009735 117.0
DYD2_k127_11868_24 Belongs to the eukaryotic ribosomal protein eL32 family K02912 GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0015934,GO:0022625,GO:0022626,GO:0032991,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:1990904 - 0.00000000000000000000000001273 124.0
DYD2_k127_11868_25 Belongs to the HesB IscA family K13628 - - 0.000000000000000000000003399 108.0
DYD2_k127_11868_26 FAD binding domain - - - 0.0000000000000000007525 91.0
DYD2_k127_11868_27 binds to the 23S rRNA K02876 - - 0.000000000000005524 83.0
DYD2_k127_11868_28 Binds 16S rRNA, required for the assembly of 30S particles K02954 - - 0.0000000000002763 70.0
DYD2_k127_11868_29 - - - - 0.0000000001857 73.0
DYD2_k127_11868_3 proline betaine transporter - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001298 369.0
DYD2_k127_11868_30 - - - - 0.00000003734 62.0
DYD2_k127_11868_31 Winged helix-turn-helix DNA-binding - - - 0.00000007288 61.0
DYD2_k127_11868_32 - - - - 0.000002829 55.0
DYD2_k127_11868_33 TonB dependent receptor - - - 0.000008368 57.0
DYD2_k127_11868_34 TM2 domain - - - 0.00002281 51.0
DYD2_k127_11868_35 SdrD B-like domain - - - 0.0003426 52.0
DYD2_k127_11868_36 Carboxypeptidase regulatory-like domain - - - 0.0004832 51.0
DYD2_k127_11868_4 FMN-dependent dehydrogenase K11517 - 1.1.3.15 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001202 363.0
DYD2_k127_11868_5 DEAD DEAH box helicase domain protein K10896 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000148 370.0
DYD2_k127_11868_6 With S4 and S12 plays an important role in translational accuracy K02988 GO:0003674,GO:0003735,GO:0005198,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0006412,GO:0006518,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0015935,GO:0019538,GO:0022626,GO:0022627,GO:0032991,GO:0034641,GO:0034645,GO:0043043,GO:0043170,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:0071704,GO:1901564,GO:1901566,GO:1901576,GO:1990904 - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000005322 282.0
DYD2_k127_11868_7 Poorly processive, error-prone DNA polymerase involved in untargeted mutagenesis. Copies undamaged DNA at stalled replication forks, which arise in vivo from mismatched or misaligned primer ends. These misaligned primers can be extended by PolIV. Exhibits no 3'-5' exonuclease (proofreading) activity. May be involved in translesional synthesis K04479 - 2.7.7.7 0.000000000000000000000000000000000000000000000000000000000000000000000009536 263.0
DYD2_k127_11868_8 Belongs to the eukaryotic ribosomal protein eS4 family K02987 - - 0.0000000000000000000000000000000000000000000000000000000000009388 219.0
DYD2_k127_11868_9 Belongs to the archaeal adenylate kinase family K00939 - 2.7.4.3 0.00000000000000000000000000000000000000000000000000005331 194.0
DYD2_k127_1188265_0 Catalyzes the reversible conversion of 2- phosphoglycerate into phosphoenolpyruvate. It is essential for the degradation of carbohydrates via glycolysis K01689 - 4.2.1.11 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003182 537.0
DYD2_k127_1188265_1 PFAM tRNA synthetase, class II (G, H, P and S) K01880 - 6.1.1.14 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000001258 283.0
DYD2_k127_1188265_2 Zinc carboxypeptidase - - - 0.0000000000000000000000000000000001375 153.0
DYD2_k127_1188265_3 Roadblock LC7 family protein K07131 - - 0.0000000000000002752 83.0
DYD2_k127_1188265_4 RNA binding K07581 - - 0.0000004544 55.0
DYD2_k127_1188265_5 TonB-dependent receptor plug K02014 - - 0.0002601 52.0
DYD2_k127_1211392_0 4Fe-4S single cluster domain K07129 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000001601 289.0
DYD2_k127_1211392_1 Sliding clamp subunit that acts as a moving platform for DNA processing. Responsible for tethering the catalytic subunit of DNA polymerase and other proteins to DNA during high-speed replication K04802 GO:0003674,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0006139,GO:0006259,GO:0006260,GO:0006261,GO:0006271,GO:0006272,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0016070,GO:0022616,GO:0030234,GO:0030337,GO:0032991,GO:0034641,GO:0034645,GO:0042802,GO:0043170,GO:0043626,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044424,GO:0044464,GO:0044796,GO:0046483,GO:0050790,GO:0065007,GO:0065009,GO:0071704,GO:0090304,GO:0098772,GO:1901360,GO:1901576 - 0.00000000000000000000000000000000000000000000000000000000000000000000002156 250.0
DYD2_k127_1211392_10 NUDIX domain K03574 - 3.6.1.55 0.00000000000000000000000000000002378 139.0
DYD2_k127_1211392_11 Belongs to the archaeal rpoM eukaryotic RPA12 RPB9 RPC11 RNA polymerase family K03057 GO:0003674,GO:0005488,GO:0006355,GO:0008150,GO:0008270,GO:0009889,GO:0010468,GO:0010556,GO:0019219,GO:0019222,GO:0031323,GO:0031326,GO:0043167,GO:0043169,GO:0046872,GO:0046914,GO:0050789,GO:0050794,GO:0051171,GO:0051252,GO:0060255,GO:0065007,GO:0080090,GO:1903506,GO:2000112,GO:2001141 - 0.00000000000000008903 89.0
DYD2_k127_1211392_12 - - - - 0.000008923 53.0
DYD2_k127_1211392_13 TonB-dependent receptor K02014 - - 0.0002817 52.0
DYD2_k127_1211392_2 TIGRFAM geranylgeranyl reductase family - - - 0.000000000000000000000000000000000000000000000000000000000000000001443 243.0
DYD2_k127_1211392_3 PFAM Uncharacterised ACR, YagE family COG1723 - - - 0.000000000000000000000000000000000000000000000000000212 199.0
DYD2_k127_1211392_4 Bacterial phospho-glucose isomerase C-terminal SIS domain K15916 - 5.3.1.8,5.3.1.9 0.00000000000000000000000000000000000000000000001125 187.0
DYD2_k127_1211392_5 Protein of unknown function (DUF531) K09725 - - 0.000000000000000000000000000000000000000000006642 176.0
DYD2_k127_1211392_6 transcription regulator activity - - - 0.0000000000000000000000000000000000000004776 153.0
DYD2_k127_1211392_7 Belongs to the UPF0215 family K09120 - - 0.000000000000000000000000000000000000004679 153.0
DYD2_k127_1211392_8 Peptidyl-tRNA hydrolase PTH2 K04794 GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0044424,GO:0044464 3.1.1.29 0.00000000000000000000000000000000002472 138.0
DYD2_k127_1211392_9 PFAM ABC transporter related K01990 - - 0.000000000000000000000000000000001684 135.0
DYD2_k127_1211918_0 Involved in the gluconeogenesis. Catalyzes stereospecifically the conversion of dihydroxyacetone phosphate (DHAP) to D-glyceraldehyde-3-phosphate (G3P) K01803 - 5.3.1.1 0.000000000000000000000000000000000000000000000007693 181.0
DYD2_k127_1211918_1 COG1599 Single-stranded DNA-binding replication protein A (RPA), large (70 kD) subunit and related ssDNA-binding proteins K07466 - - 0.000000000000000000000000000001104 127.0
DYD2_k127_1211918_2 PFAM Archease protein family (DUF101 UPF0211) - - - 0.000000000000001014 83.0
DYD2_k127_1211918_3 - - - - 0.00000000000008932 81.0
DYD2_k127_1211918_4 Repeats in polycystic kidney disease 1 (PKD1) and other proteins - - - 0.000000001142 70.0
DYD2_k127_1211918_5 ATPase involved in replication control, Cdc46 Mcm family - - - 0.000001176 56.0
DYD2_k127_1211918_6 peptidase - - - 0.00005093 55.0
DYD2_k127_1211918_7 protein conserved in bacteria - - - 0.00005974 51.0
DYD2_k127_1211918_8 CarboxypepD_reg-like domain - - - 0.00007672 54.0
DYD2_k127_1223326_0 CopC domain K14166 - - 0.000000000000000000000000008964 126.0
DYD2_k127_1223326_1 Binds double-stranded DNA tightly but without sequence specificity. It is distributed uniformly and abundantly on the chromosome, suggesting a role in chromatin architecture. However, it does not significantly compact DNA. Binds rRNA and mRNA in vivo. May play a role in maintaining the structural and functional stability of RNA, and, perhaps, ribosomes K03622 - - 0.00000000000000000000007118 113.0
DYD2_k127_1223326_2 ACT domain - - - 0.0000000000001497 79.0
DYD2_k127_1223326_3 regulator of chromosome condensation, RCC1 - - - 0.000000001563 71.0
DYD2_k127_1223326_4 CarboxypepD_reg-like domain - - - 0.00001814 57.0
DYD2_k127_1228664_0 Polyketide cyclase / dehydrase and lipid transport - - - 0.0000000000000000000000000000000000000000000000000000003713 199.0
DYD2_k127_1228664_1 - - - - 0.0000000000000000517 92.0
DYD2_k127_1228664_2 Hemerythrin - - - 0.0000000000000009171 85.0
DYD2_k127_1228664_3 Dodecin K09165 - - 0.00000002244 64.0
DYD2_k127_1228664_4 Repeats in polycystic kidney disease 1 (PKD1) and other proteins - - - 0.00000002623 64.0
DYD2_k127_1228664_5 Belongs to the glycosyl hydrolase 5 (cellulase A) family K01179,K19668 GO:0005575,GO:0005576 3.2.1.4,3.2.1.91 0.000006859 59.0
DYD2_k127_1228664_6 - - - - 0.0001576 49.0
DYD2_k127_1231444_0 Acetyl-CoA carboxylase, carboxyltransferase component (subunits alpha and beta) - - - 5.399e-208 658.0
DYD2_k127_1231444_1 Carbamoyl-phosphate synthetase large chain domain protein K01959 - 6.4.1.1 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000326 501.0
DYD2_k127_1231444_10 Specifically methylates the uridine in position 2552 of 23S rRNA at the 2'-O position of the ribose in the fully assembled 50S ribosomal subunit K02427 GO:0000027,GO:0000154,GO:0000451,GO:0000453,GO:0001510,GO:0003674,GO:0003824,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006139,GO:0006364,GO:0006396,GO:0006725,GO:0006807,GO:0006996,GO:0008150,GO:0008152,GO:0008168,GO:0008171,GO:0008173,GO:0008649,GO:0008650,GO:0008757,GO:0009451,GO:0009987,GO:0010467,GO:0016043,GO:0016070,GO:0016072,GO:0016436,GO:0016740,GO:0016741,GO:0022607,GO:0022613,GO:0022618,GO:0031167,GO:0032259,GO:0034470,GO:0034622,GO:0034641,GO:0034660,GO:0042254,GO:0042255,GO:0042273,GO:0043170,GO:0043412,GO:0043414,GO:0043933,GO:0044085,GO:0044237,GO:0044238,GO:0044260,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0065003,GO:0070925,GO:0071704,GO:0071826,GO:0071840,GO:0090304,GO:0140098,GO:0140102,GO:1901360 2.1.1.166 0.0000000000000000000000000000000000000000000000000301 194.0
DYD2_k127_1231444_11 COG2030 Acyl dehydratase - - - 0.000000000000000000000000000000000000002632 159.0
DYD2_k127_1231444_12 Probable molybdopterin binding domain - - - 0.0000000000000000000000000000000000003849 150.0
DYD2_k127_1231444_13 Subunits I and II form the functional core of the enzyme complex. Electrons originating in cytochrome c are transferred via heme a and Cu(A) to the binuclear center formed by heme a3 and Cu(B) K02275 - 1.9.3.1 0.0000000000000000000000000000000005326 145.0
DYD2_k127_1231444_14 Glycosyl transferase K00728 - 2.4.1.109 0.00000000000000000000000000001161 137.0
DYD2_k127_1231444_15 phosphatidylserine decarboxylase K01613 - 4.1.1.65 0.000000000000002566 77.0
DYD2_k127_1231444_16 Belongs to the CDP-alcohol phosphatidyltransferase class-I family K17103 - 2.7.8.8 0.000000000000004908 84.0
DYD2_k127_1231444_17 Biotin-requiring enzyme - - - 0.000000000000007266 86.0
DYD2_k127_1231444_18 Winged helix-turn-helix - - - 0.000000005044 61.0
DYD2_k127_1231444_19 Sugar-specific transcriptional regulator TrmB - - - 0.0000003792 61.0
DYD2_k127_1231444_2 Amidohydrolase K07045 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000002958 289.0
DYD2_k127_1231444_20 Winged helix-turn-helix DNA-binding - - - 0.000004721 57.0
DYD2_k127_1231444_21 CarboxypepD_reg-like domain - - - 0.000321 51.0
DYD2_k127_1231444_3 Cytochrome c oxidase is the component of the respiratory chain that catalyzes the reduction of oxygen to water. Subunits 1- 3 form the functional core of the enzyme complex. CO I is the catalytic subunit of the enzyme. Electrons originating in cytochrome c are transferred via the copper A center of subunit 2 and heme A of subunit 1 to the bimetallic center formed by heme A3 and copper B K02274 - 1.9.3.1 0.0000000000000000000000000000000000000000000000000000000000000000000001362 249.0
DYD2_k127_1231444_4 PFAM Glycosyl transferase family 2 K00721 - 2.4.1.83 0.0000000000000000000000000000000000000000000000000000000000000000000004233 253.0
DYD2_k127_1231444_5 COG2301 Citrate lyase beta subunit K01644 - 4.1.3.34 0.00000000000000000000000000000000000000000000000000000000002146 216.0
DYD2_k127_1231444_6 COG0697 Permeases of the drug metabolite transporter (DMT) superfamily - - - 0.00000000000000000000000000000000000000000000000000000000002645 217.0
DYD2_k127_1231444_7 Dimethylates a single guanine residue at position 26 of a number of tRNAs using S-adenosyl-L-methionine as donor of the methyl groups K00555 GO:0001510,GO:0002940,GO:0003674,GO:0003824,GO:0004809,GO:0006139,GO:0006396,GO:0006399,GO:0006400,GO:0006725,GO:0006807,GO:0008033,GO:0008150,GO:0008152,GO:0008168,GO:0008170,GO:0008173,GO:0008175,GO:0008757,GO:0009451,GO:0009987,GO:0010467,GO:0016070,GO:0016423,GO:0016740,GO:0016741,GO:0030488,GO:0032259,GO:0034470,GO:0034641,GO:0034660,GO:0043170,GO:0043412,GO:0043414,GO:0044237,GO:0044238,GO:0044260,GO:0046483,GO:0071704,GO:0090304,GO:0140098,GO:0140101,GO:1901360 2.1.1.215,2.1.1.216 0.00000000000000000000000000000000000000000000000000000000003434 223.0
DYD2_k127_1231444_8 Has nucleotide phosphatase activity towards ATP, GTP, CTP, TTP and UTP. May hydrolyze nucleoside diphosphates with lower efficiency K06928 - 3.6.1.15 0.00000000000000000000000000000000000000000000000000000001298 203.0
DYD2_k127_1231444_9 Alpha/beta hydrolase family - - - 0.000000000000000000000000000000000000000000000000001559 196.0
DYD2_k127_1234299_0 Part of the ABC transporter complex PstSACB involved in phosphate import K02040 - - 0.00000000000000000000000000000000000000000000000000000000000000000000802 250.0
DYD2_k127_1234299_1 Binds to the 50S ribosomal subunit and prevents its association with the 30S ribosomal subunit to form the 70S initiation complex K03264 - - 0.000000000000000000000000000000000000000000002231 178.0
DYD2_k127_1234299_10 Belongs to the eukaryotic ribosomal protein eL39 family K02924 - - 0.00000001198 63.0
DYD2_k127_1234299_11 CRS1_YhbY K07574 - - 0.00008145 53.0
DYD2_k127_1234299_2 May be involved in maturation of the 30S ribosomal subunit K02966 GO:0000028,GO:0003674,GO:0003735,GO:0005198,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0006996,GO:0008150,GO:0009987,GO:0015935,GO:0016043,GO:0022607,GO:0022613,GO:0022618,GO:0022626,GO:0022627,GO:0032991,GO:0034622,GO:0042254,GO:0042255,GO:0042274,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043933,GO:0044085,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:0065003,GO:0070925,GO:0071826,GO:0071840,GO:1990904 - 0.000000000000000000000000000000000000000000002251 169.0
DYD2_k127_1234299_3 Phosphate transport regulator K07220 - - 0.00000000000000000000000000000000000000000006386 166.0
DYD2_k127_1234299_4 PFAM transferase hexapeptide repeat containing protein - - - 0.00000000000000000000000000000000122 149.0
DYD2_k127_1234299_5 Reversible hydration of carbon dioxide K01673 - 4.2.1.1 0.000000000000000000000000000005656 127.0
DYD2_k127_1234299_6 Belongs to the PDCD5 family K06875 - - 0.00000000000000000000004374 102.0
DYD2_k127_1234299_7 Part of ribonuclease P, a protein complex that generates mature tRNA molecules by cleaving their 5'-ends K03540 - 3.1.26.5 0.00000000000000000003592 93.0
DYD2_k127_1234299_8 Belongs to the ribosomal protein L31e family K02910 - - 0.0000000000000000005013 95.0
DYD2_k127_1234299_9 Leucyl aminopeptidase K19701 - 3.4.11.10,3.4.11.6 0.000000003079 69.0
DYD2_k127_123450_0 dna ligase K01971 - 6.5.1.1 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002284 376.0
DYD2_k127_123450_1 PFAM Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000004232 311.0
DYD2_k127_123450_10 Universal stress protein - - - 0.0000000003842 71.0
DYD2_k127_123450_2 ATP dependent DNA ligase domain protein K01971 - 6.5.1.1 0.00000000000000000000000000000000000000000000000000000000000000000000000000000026 277.0
DYD2_k127_123450_3 With LigD forms a non-homologous end joining (NHEJ) DNA repair enzyme, which repairs dsDNA breaks with reduced fidelity. Binds linear dsDNA with 5'- and 3'- overhangs but not closed circular dsDNA nor ssDNA. Recruits and stimulates the ligase activity of LigD K10979 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000003653 263.0
DYD2_k127_123450_4 Histidine kinase-, DNA gyrase B-, and HSP90-like - - - 0.0000000000000000000000000000000000000000008636 173.0
DYD2_k127_123450_5 Low affinity iron permease - - - 0.0000000000000000000000000000004617 133.0
DYD2_k127_123450_6 Transcriptional regulator, ArsR family - - - 0.0000000000000000000000003751 115.0
DYD2_k127_123450_7 COG1522 Transcriptional regulators K03718 - - 0.000000000000000171 87.0
DYD2_k127_123450_8 domain, Protein - - - 0.000000000002514 77.0
DYD2_k127_123450_9 LVIVD repeat - - - 0.00000000005706 64.0
DYD2_k127_1239947_0 Part of the ABC transporter complex PstSACB involved in phosphate import. Responsible for energy coupling to the transport system K02036 - 3.6.3.27 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001884 344.0
DYD2_k127_1239947_1 probably responsible for the translocation of the substrate across the membrane K02037 - - 0.000000000000000000000000000000000000000000000000000000000000000000008238 252.0
DYD2_k127_1239947_10 Helix-turn-helix diphteria tox regulatory element K03709 - - 0.0000000000000000000004411 102.0
DYD2_k127_1239947_11 Belongs to the 5'(3')-deoxyribonucleotidase family K05967 - - 0.0000000000249 72.0
DYD2_k127_1239947_12 E1-E2 ATPase K01533,K17686 - 3.6.3.4,3.6.3.54 0.000000001076 69.0
DYD2_k127_1239947_2 Binding-protein-dependent transport system inner membrane component K02038 - - 0.00000000000000000000000000000000000000000000000000000000000000003655 233.0
DYD2_k127_1239947_3 Part of the ABC transporter complex PstSACB involved in phosphate import K02040 - - 0.0000000000000000000000000000000000000000000000000000000000000003686 234.0
DYD2_k127_1239947_4 Plays a role in the regulation of phosphate uptake K02039 - - 0.00000000000000000000000000000000000000000000000004481 190.0
DYD2_k127_1239947_5 Phosphate uptake regulator, PhoU - - - 0.00000000000000000000000000000000000000000000000005892 191.0
DYD2_k127_1239947_6 cellular water homeostasis K05802 - - 0.000000000000000000000000000000000000000000001329 181.0
DYD2_k127_1239947_7 Radical SAM - - - 0.000000000000000000000000000000000000000004438 169.0
DYD2_k127_1239947_8 Iron permease, FTR1 K07243 - - 0.00000000000000000000000000000000000000001289 175.0
DYD2_k127_1239947_9 Low molecular weight phosphotyrosine protein phosphatase K03741,K18701 - 1.20.4.1,2.8.4.2 0.0000000000000000000000000000000006096 136.0
DYD2_k127_1242642_0 Plays an important role in the de novo pathway of purine nucleotide biosynthesis. Catalyzes the first committed step in the biosynthesis of AMP from IMP K01939 GO:0003674,GO:0003824,GO:0004019,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006139,GO:0006163,GO:0006164,GO:0006167,GO:0006725,GO:0006753,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009117,GO:0009123,GO:0009124,GO:0009126,GO:0009127,GO:0009150,GO:0009152,GO:0009156,GO:0009161,GO:0009165,GO:0009167,GO:0009168,GO:0009259,GO:0009260,GO:0009987,GO:0016874,GO:0016879,GO:0017144,GO:0018130,GO:0019438,GO:0019637,GO:0019693,GO:0034641,GO:0034654,GO:0044208,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0044424,GO:0044464,GO:0046033,GO:0046040,GO:0046390,GO:0046483,GO:0055086,GO:0071704,GO:0072521,GO:0072522,GO:0090407,GO:1901135,GO:1901137,GO:1901293,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576 6.3.4.4 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000363 418.0
DYD2_k127_1242642_1 PFAM SPFH domain Band 7 family - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008677 314.0
DYD2_k127_1242642_2 PPIases accelerate the folding of proteins. It catalyzes the cis-trans isomerization of proline imidic peptide bonds in oligopeptides K03767,K03768 - 5.2.1.8 0.0000000000000000000000000000000000000000000002913 173.0
DYD2_k127_1242642_3 PPIases accelerate the folding of proteins. It catalyzes the cis-trans isomerization of proline imidic peptide bonds in oligopeptides K03768 - 5.2.1.8 0.00000000000000000000000000000000000003944 151.0
DYD2_k127_1242642_4 Serine/threonine phosphatases, family 2C, catalytic domain K01090 - 3.1.3.16 0.00001114 53.0
DYD2_k127_1242642_5 Peptidyl-prolyl cis-trans K01802,K03772 - 5.2.1.8 0.0007525 51.0
DYD2_k127_1258624_0 ABC transporter, transmembrane K06147 - - 8.553e-236 744.0
DYD2_k127_1258624_1 Luciferase-like monooxygenase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009855 373.0
DYD2_k127_1258624_2 Sodium/hydrogen exchanger family K03455 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004387 392.0
DYD2_k127_1258624_3 PFAM Aldo keto reductase family - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000104 304.0
DYD2_k127_1258624_4 O-methyltransferase - - - 0.0000000000000000000000000000000000000000000000000000000001687 217.0
DYD2_k127_1258624_5 Uncharacterized conserved protein (DUF2277) - - - 0.0000000000000000000000000000000824 126.0
DYD2_k127_1258624_6 His Kinase A (phosphoacceptor - - - 0.00000004686 63.0
DYD2_k127_1258624_7 methyltransferase - - - 0.0000003421 62.0
DYD2_k127_1258624_8 Histidine kinase - - - 0.00008669 54.0
DYD2_k127_1264795_0 Isocitrate/isopropylmalate dehydrogenase K00031 - 1.1.1.42 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000073 600.0
DYD2_k127_1264795_1 Beta-Casp domain K07577 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001859 417.0
DYD2_k127_1264795_2 Iron-sulfur cluster binding domain of dihydroorotate dehydrogenase B K02823 - - 0.000000000000000000000000000000000000000000000000000000000009402 216.0
DYD2_k127_1264795_3 Lrp/AsnC ligand binding domain - - - 0.0000000000000000000000000000009096 123.0
DYD2_k127_1264795_4 nucleotide metabolic process - - - 0.0000000000000000000008861 101.0
DYD2_k127_1264795_5 - - - - 0.00001063 51.0
DYD2_k127_1269010_0 X-Pro dipeptidyl-peptidase C-terminal non-catalytic domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000006872 281.0
DYD2_k127_1273720_0 ATPases associated with a variety of cellular activities K01990 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000001063 294.0
DYD2_k127_1273720_1 Enoyl-(Acyl carrier protein) reductase K00208 - 1.3.1.10,1.3.1.9 0.00000000000000000000000000000000000000000000000000000000000000000000001055 251.0
DYD2_k127_1283360_0 Belongs to the glycosyl hydrolase 57 family K07405 - 3.2.1.1 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001399 458.0
DYD2_k127_1283360_1 COG3387 Glucoamylase and related glycosyl hydrolases - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000206 383.0
DYD2_k127_1283360_2 Starch synthase catalytic domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000001496 311.0
DYD2_k127_1283360_3 Methyltransferase, chemotaxis proteins K00575,K13924 - 2.1.1.80,3.1.1.61 0.00000000000000000000000000000000000000000000000000000000000000000000000005084 271.0
DYD2_k127_1283360_4 HD domain - - - 0.000000000000000000000000000000000000000002944 175.0
DYD2_k127_1283360_5 Protein of unknown function (DUF2934) - - - 0.00000000000322 69.0
DYD2_k127_1316534_0 metal-dependent hydrolases related to alanyl-tRNA synthetase HxxxH domain K07050 - - 0.0000000000000000000000000000000000000000000000000000000000003507 219.0
DYD2_k127_1316534_1 Thiamin pyrophosphokinase, vitamin B1 binding domain K00949 - 2.7.6.2 0.00000000000000000000005565 107.0
DYD2_k127_1316534_2 Sodium/calcium exchanger protein K07301 - - 0.000000000000000009947 88.0
DYD2_k127_1316534_3 Toxic component of a toxin-antitoxin (TA) module. An RNase - - - 0.0000000006843 67.0
DYD2_k127_1316534_4 glucose sorbosone - - - 0.0001395 54.0
DYD2_k127_1316534_5 Addiction module antidote - - - 0.000194 46.0
DYD2_k127_1327118_0 helix_turn_helix ASNC type K03718 - - 0.0002826 53.0
DYD2_k127_1333215_0 Multicopper oxidase K00368 - 1.7.2.1 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002091 378.0
DYD2_k127_1333215_1 - - - - 0.000000000000000000000000000000000000000000000000000001965 203.0
DYD2_k127_1333215_2 Glyoxalase-like domain K07032 - - 0.00000000000000000000000000000000000000000000006142 175.0
DYD2_k127_1333215_3 DoxX K16937 - 1.8.5.2 0.00000000000000000000000000000000000000000000007978 176.0
DYD2_k127_1333215_4 - - - - 0.000000000000000000000000000000000005969 146.0
DYD2_k127_1333215_5 - - - - 0.00000000000000000000000000000000002934 148.0
DYD2_k127_1333215_6 - - - - 0.000000002886 62.0
DYD2_k127_1333215_7 Helix-turn-helix domain - - - 0.000000004147 63.0
DYD2_k127_1333215_8 - - - - 0.000001136 53.0
DYD2_k127_1333215_9 Methyl-accepting chemotaxis protein K03406 - - 0.0002749 50.0
DYD2_k127_1336338_0 Acetyl-coenzyme A synthetase N-terminus K01895 - 6.2.1.1 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004087 566.0
DYD2_k127_1336338_1 Cytochrome c oxidase is the component of the respiratory chain that catalyzes the reduction of oxygen to water. Subunits 1- 3 form the functional core of the enzyme complex. CO I is the catalytic subunit of the enzyme. Electrons originating in cytochrome c are transferred via the copper A center of subunit 2 and heme A of subunit 1 to the bimetallic center formed by heme A3 and copper B K02274 - 1.9.3.1 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002904 355.0
DYD2_k127_1336338_10 HicB_like antitoxin of bacterial toxin-antitoxin system - - - 0.000000002961 66.0
DYD2_k127_1336338_2 Converts heme B (protoheme IX) to heme O by substitution of the vinyl group on carbon 2 of heme B porphyrin ring with a hydroxyethyl farnesyl side group K02257 - 2.5.1.141 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000004662 315.0
DYD2_k127_1336338_3 Catalyzes the ATP-dependent conversion of 7-carboxy-7- deazaguanine (CDG) to 7-cyano-7-deazaguanine (preQ(0)) K06920 - 6.3.4.20 0.0000000000000000000000000000000000000000000000000000000000000000000000000006917 264.0
DYD2_k127_1336338_4 Catalyzes the complex heterocyclic radical-mediated conversion of 6-carboxy-5,6,7,8-tetrahydropterin (CPH4) to 7- carboxy-7-deazaguanine (CDG), a step common to the biosynthetic pathways of all 7-deazapurine-containing compounds K10026 - 4.3.99.3 0.00000000000000000000000000000000000000000000000000009927 203.0
DYD2_k127_1336338_5 PFAM HhH-GPD K07457 - - 0.000000000000000000000000000000000000000000000000005086 192.0
DYD2_k127_1336338_6 COG1845 Heme copper-type cytochrome quinol oxidase, subunit 3 K02276 - 1.9.3.1 0.00000000000000000000000000000000000000000000001215 181.0
DYD2_k127_1336338_7 6-pyruvoyl tetrahydropterin synthase K01737 - 4.1.2.50,4.2.3.12 0.00000000000000000000000000000000007052 140.0
DYD2_k127_1336338_8 HicA toxin of bacterial toxin-antitoxin, - - - 0.000000000001419 70.0
DYD2_k127_1336338_9 Transcriptional regulator - - - 0.000000001023 64.0
DYD2_k127_1348608_0 - - - - 0.0000008654 61.0
DYD2_k127_13847_0 Belongs to the class-I aminoacyl-tRNA synthetase family K01883 GO:0000166,GO:0003674,GO:0003824,GO:0004812,GO:0004817,GO:0005488,GO:0005524,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006082,GO:0006139,GO:0006399,GO:0006412,GO:0006418,GO:0006423,GO:0006518,GO:0006520,GO:0006725,GO:0006807,GO:0008144,GO:0008150,GO:0008152,GO:0008270,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0016070,GO:0016874,GO:0016875,GO:0017076,GO:0019538,GO:0019752,GO:0030554,GO:0032553,GO:0032555,GO:0032559,GO:0034641,GO:0034645,GO:0034660,GO:0035639,GO:0036094,GO:0043038,GO:0043039,GO:0043043,GO:0043167,GO:0043168,GO:0043169,GO:0043170,GO:0043436,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044281,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0046872,GO:0046914,GO:0071704,GO:0090304,GO:0097159,GO:0097367,GO:0140098,GO:0140101,GO:1901265,GO:1901360,GO:1901363,GO:1901564,GO:1901566,GO:1901576 6.1.1.16 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001378 433.0
DYD2_k127_13847_1 Helix-turn-helix XRE-family like proteins K07731 - - 0.0000000000000000000000000000000000000000000000000000000000000000000004773 246.0
DYD2_k127_13847_2 CDP-alcohol phosphatidyltransferase - - - 0.000008642 57.0
DYD2_k127_13847_3 CarboxypepD_reg-like domain - - - 0.00001309 57.0
DYD2_k127_13847_4 Toxic component of a toxin-antitoxin (TA) module. An RNase - - - 0.0001227 51.0
DYD2_k127_1464079_0 Transcriptional regulator, ArsR family - - - 0.000000000000000001479 96.0
DYD2_k127_1496550_0 Glycosyl transferase 4-like domain - - - 0.0000000000000000000000000000000000000000000000000000000000004141 226.0
DYD2_k127_1496550_1 Glycosyltransferase Family 4 K00743 - 2.4.1.87 0.00000000000000000000000000000000000482 151.0
DYD2_k127_1496550_10 COGs COG4743 membrane protein - - - 0.0009063 51.0
DYD2_k127_1496550_2 PFAM Glycosyl transferase family 2 - - - 0.0000000000000000000000000000000347 137.0
DYD2_k127_1496550_3 mannose-ethanolamine phosphotransferase activity - - - 0.000000000000000000000000002248 126.0
DYD2_k127_1496550_4 transferase activity, transferring glycosyl groups - - - 0.0000000000000002454 92.0
DYD2_k127_1496550_5 Protein involved in outer membrane biogenesis - - - 0.000000000001897 81.0
DYD2_k127_1496550_6 - - - - 0.000000004692 69.0
DYD2_k127_1496550_7 Repeat domain in Vibrio, Colwellia, Bradyrhizobium and Shewanella - - - 0.000004938 59.0
DYD2_k127_1496550_8 Sulfatase - - - 0.00001857 51.0
DYD2_k127_1496550_9 Belongs to the glycosyl hydrolase 5 (cellulase A) family K01179,K19668 GO:0005575,GO:0005576 3.2.1.4,3.2.1.91 0.00003009 57.0
DYD2_k127_150176_0 Involved in the biosynthesis of the central metabolite phospho-alpha-D-ribosyl-1-pyrophosphate (PRPP) via the transfer of pyrophosphoryl group from ATP to 1-hydroxyl of ribose-5-phosphate (Rib-5-P) K00948 - 2.7.6.1 0.0000000000000000000000000000000000000000000000000000000000007586 224.0
DYD2_k127_150176_1 Lipoate-protein ligase K03800 GO:0003674,GO:0003824,GO:0006082,GO:0006464,GO:0006629,GO:0006631,GO:0006633,GO:0006732,GO:0006790,GO:0006807,GO:0008150,GO:0008152,GO:0008610,GO:0009058,GO:0009106,GO:0009107,GO:0009108,GO:0009249,GO:0009987,GO:0010467,GO:0016053,GO:0016415,GO:0016740,GO:0016746,GO:0016747,GO:0018065,GO:0018130,GO:0018193,GO:0018205,GO:0019538,GO:0019752,GO:0032787,GO:0036211,GO:0043170,GO:0043412,GO:0043436,GO:0044237,GO:0044238,GO:0044249,GO:0044255,GO:0044260,GO:0044267,GO:0044272,GO:0044281,GO:0044283,GO:0046394,GO:0046483,GO:0051186,GO:0051188,GO:0051604,GO:0071704,GO:0072330,GO:1901360,GO:1901362,GO:1901564,GO:1901576 6.3.1.20 0.0000000000000000000000000000000005408 139.0
DYD2_k127_150176_2 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase - - - 0.0000000000000000000000000000001102 142.0
DYD2_k127_150176_3 Toxic component of a toxin-antitoxin (TA) module. An RNase K07064 - - 0.000000000000001014 81.0
DYD2_k127_150176_4 Sigma-54 interaction domain K03405 - 6.6.1.1 0.000000000000008462 87.0
DYD2_k127_150176_5 SpoVT / AbrB like domain - - - 0.0001742 47.0
DYD2_k127_1565296_0 DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates K03041 GO:0000428,GO:0005575,GO:0005622,GO:0005623,GO:0030880,GO:0032991,GO:0044424,GO:0044464,GO:0061695,GO:1902494,GO:1990234 2.7.7.6 1.028e-279 873.0
DYD2_k127_1565296_1 DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates K03042 - 2.7.7.6 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001983 402.0
DYD2_k127_1565296_10 PFAM Sugar isomerase (SIS) K08094 - 5.3.1.27 0.000000000000000000000000000000000000000009004 164.0
DYD2_k127_1565296_11 cheY-homologous receiver domain - - - 0.0000000000000000000000000001493 120.0
DYD2_k127_1565296_12 Participates in transcription termination K02600 - - 0.0000000000000000000000002578 115.0
DYD2_k127_1565296_13 PFAM ribosomal protein L7Ae L30e S12e Gadd45 K02908 - - 0.0000000000000000000000006699 106.0
DYD2_k127_1565296_14 Transcriptional regulatory protein, C terminal K07667 - - 0.00000006042 63.0
DYD2_k127_1565296_15 Transglutaminase-like superfamily - - - 0.000002459 61.0
DYD2_k127_1565296_16 PFAM transposase, IS4 family protein - - - 0.0001282 46.0
DYD2_k127_1565296_2 Carboxypeptidase regulatory-like domain K07151 - 2.4.99.18 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004485 414.0
DYD2_k127_1565296_3 Part of the RFC clamp loader complex which loads the PCNA sliding clamp onto DNA K04800 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001019 352.0
DYD2_k127_1565296_4 Diphthamide K07561 - 2.5.1.108 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000001133 301.0
DYD2_k127_1565296_5 Belongs to the group II decarboxylase family. MfnA subfamily K18933 - 4.1.1.11,4.1.1.25 0.00000000000000000000000000000000000000000000000000000000000000000000000000000002744 281.0
DYD2_k127_1565296_6 Xylose isomerase-like TIM barrel K01151 - 3.1.21.2 0.0000000000000000000000000000000000000000000000000000000000000000000000002578 260.0
DYD2_k127_1565296_7 PFAM ATP-binding region ATPase domain protein - - - 0.000000000000000000000000000000000000000000000000000000353 221.0
DYD2_k127_1565296_8 Multicopper oxidase - - - 0.00000000000000000000000000000000000000000000000000005818 205.0
DYD2_k127_1565296_9 Catalyzes a salvage reaction resulting in the formation of IMP that is energically less costly than de novo synthesis K00759 GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0044424,GO:0044464 2.4.2.7 0.000000000000000000000000000000000000000000003174 171.0
DYD2_k127_1575150_0 Transport permease protein K01992 - - 0.000000000000000000000000008425 118.0
DYD2_k127_1575150_1 HicA toxin of bacterial toxin-antitoxin, - - - 0.0000000000000008718 79.0
DYD2_k127_1575150_2 HicB_like antitoxin of bacterial toxin-antitoxin system - - - 0.000002413 56.0
DYD2_k127_1575150_3 CarboxypepD_reg-like domain - - - 0.00001554 57.0
DYD2_k127_1575150_4 HicB_like antitoxin of bacterial toxin-antitoxin system - - - 0.00001934 53.0
DYD2_k127_1583099_0 - - - - 0.000000000000000000000000000000000000000000000001776 181.0
DYD2_k127_1583099_1 Transcriptional regulator - - - 0.00000000000552 74.0
DYD2_k127_1583099_2 Fibronectin type III domain - - - 0.000000002821 70.0
DYD2_k127_1594486_0 Endonuclease IV plays a role in DNA repair. It cleaves phosphodiester bonds at apurinic or apyrimidinic sites (AP sites) to produce new 5'-ends that are base-free deoxyribose 5-phosphate residues. It preferentially attacks modified AP sites created by bleomycin and neocarzinostatin K01151 - 3.1.21.2 0.00000000000000000000000000000000000000000000000000000000000000000000000000153 266.0
DYD2_k127_1594486_1 abc-type fe3 -hydroxamate transport system, periplasmic component K02016 - - 0.00000000000000000000000000000000000000002386 168.0
DYD2_k127_1594486_2 PFAM phosphoesterase, RecJ domain protein K07463 - - 0.000000000000000000000000008656 125.0
DYD2_k127_1594486_3 COG0491 Zn-dependent hydrolases, including glyoxylases K01069 - 3.1.2.6 0.00000000000000000001033 96.0
DYD2_k127_164384_0 cellulose binding - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000005177 286.0
DYD2_k127_164384_1 ThiS family K03636 - - 0.00000000000379 72.0
DYD2_k127_164384_2 The UvrABC repair system catalyzes the recognition and processing of DNA lesions. UvrA is an ATPase and a DNA-binding protein. A damage recognition complex composed of 2 UvrA and 2 UvrB subunits scans DNA for abnormalities. When the presence of a lesion has been verified by UvrB, the UvrA molecules dissociate K03701 - - 0.0000000243 59.0
DYD2_k127_1647909_0 LVIVD repeat - - - 0.000000006702 67.0
DYD2_k127_169024_0 aconitate hydratase K01681 - 4.2.1.3 1.762e-311 981.0
DYD2_k127_169024_1 Catalyzes the formation of pyridoxal 5'-phosphate from ribose 5-phosphate (RBP), glyceraldehyde 3-phosphate (G3P) and ammonia. The ammonia is provided by the PdxT subunit. Can also use ribulose 5-phosphate and dihydroxyacetone phosphate as substrates, resulting from enzyme-catalyzed isomerization of RBP and G3P, respectively K06215 - 4.3.3.6 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003701 391.0
DYD2_k127_169024_2 UTRA K03710 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000785 268.0
DYD2_k127_169024_3 Prolyl oligopeptidase family - - - 0.000000000000000000000144 110.0
DYD2_k127_169024_4 Acetyltransferase (GNAT) domain K00619 - 2.3.1.1 0.0000000000000000006363 100.0
DYD2_k127_169024_5 His Kinase A (phosphoacceptor) domain - - - 0.00000000000000001247 94.0
DYD2_k127_169024_6 - - - - 0.000000000000001657 81.0
DYD2_k127_169024_7 Uncharacterized protein conserved in bacteria (DUF2255) - - - 0.00000000000002011 81.0
DYD2_k127_169024_8 Domain in cystathionine beta-synthase and other proteins. - - - 0.00000006702 61.0
DYD2_k127_1785720_0 COG0785 Cytochrome c biogenesis protein - - - 0.0000000000002042 83.0
DYD2_k127_1785720_1 Thiol-disulfide isomerase and - - - 0.0000000002242 73.0
DYD2_k127_1792763_0 phosphoserine phosphatase - GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0044424,GO:0044444,GO:0044464 - 0.000000000000004334 87.0
DYD2_k127_1800237_0 tRNA-splicing ligase that acts by directly joining spliced tRNA halves to mature-sized tRNAs by incorporating the precursor-derived splice junction phosphate into the mature tRNA as a canonical 3',5'-phosphodiester. May act as an RNA ligase with broad substrate specificity, and may function toward other RNAs K14415 GO:0000166,GO:0000394,GO:0001882,GO:0001883,GO:0003674,GO:0003824,GO:0003972,GO:0005488,GO:0006139,GO:0006396,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0008380,GO:0008452,GO:0009987,GO:0010467,GO:0016070,GO:0016874,GO:0016886,GO:0017076,GO:0019001,GO:0019002,GO:0030145,GO:0032549,GO:0032550,GO:0032553,GO:0032555,GO:0032561,GO:0034641,GO:0036094,GO:0043167,GO:0043168,GO:0043169,GO:0043170,GO:0044237,GO:0044238,GO:0046483,GO:0046872,GO:0046914,GO:0071704,GO:0090304,GO:0097159,GO:0097367,GO:0140098,GO:1901265,GO:1901360,GO:1901363 6.5.1.3 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007039 541.0
DYD2_k127_1800237_1 Belongs to the argininosuccinate synthase family. Type 1 subfamily K01940 GO:0000050,GO:0000053,GO:0003674,GO:0003824,GO:0004055,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006082,GO:0006520,GO:0006525,GO:0006526,GO:0006575,GO:0006807,GO:0008150,GO:0008152,GO:0008652,GO:0009058,GO:0009064,GO:0009084,GO:0009987,GO:0016053,GO:0016874,GO:0016879,GO:0019627,GO:0019752,GO:0034641,GO:0043436,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0044283,GO:0044424,GO:0044464,GO:0046394,GO:0071704,GO:0071941,GO:0072350,GO:1901564,GO:1901566,GO:1901576,GO:1901605,GO:1901607 6.3.4.5 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004145 471.0
DYD2_k127_1800237_2 TIGRFAM argininosuccinate lyase K01755 GO:0003674,GO:0003824,GO:0004056,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006082,GO:0006520,GO:0006525,GO:0006526,GO:0006591,GO:0006807,GO:0008150,GO:0008152,GO:0008652,GO:0009058,GO:0009064,GO:0009084,GO:0009987,GO:0016053,GO:0016829,GO:0016840,GO:0016842,GO:0019752,GO:0042450,GO:0043436,GO:0044237,GO:0044238,GO:0044249,GO:0044281,GO:0044283,GO:0044424,GO:0044464,GO:0046394,GO:0071704,GO:1901564,GO:1901566,GO:1901576,GO:1901605,GO:1901607 4.3.2.1 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007778 403.0
DYD2_k127_1800237_3 Reversibly catalyzes the transfer of the carbamoyl group from carbamoyl phosphate (CP) to the N(epsilon) atom of ornithine (ORN) to produce L-citrulline K00611 GO:0000050,GO:0003674,GO:0003824,GO:0004585,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006082,GO:0006520,GO:0006525,GO:0006526,GO:0006591,GO:0006807,GO:0008150,GO:0008152,GO:0008652,GO:0009058,GO:0009064,GO:0009084,GO:0009987,GO:0016053,GO:0016740,GO:0016741,GO:0016743,GO:0019627,GO:0019752,GO:0034641,GO:0042450,GO:0043436,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0044283,GO:0044424,GO:0044464,GO:0046394,GO:0071704,GO:0071941,GO:1901564,GO:1901566,GO:1901576,GO:1901605,GO:1901607 2.1.3.3 0.00000000000000000000000000000000000000000000000000000000000000000000000000000003372 284.0
DYD2_k127_1800237_4 TonB-dependent receptor plug K21573 GO:0001871,GO:0003674,GO:0003824,GO:0004180,GO:0004181,GO:0004185,GO:0005488,GO:0005575,GO:0005576,GO:0005615,GO:0006508,GO:0006518,GO:0006807,GO:0008150,GO:0008152,GO:0008233,GO:0008235,GO:0008236,GO:0008237,GO:0008238,GO:0009987,GO:0010467,GO:0016020,GO:0016485,GO:0016787,GO:0017171,GO:0019538,GO:0019867,GO:0030246,GO:0030247,GO:0034641,GO:0043170,GO:0043603,GO:0044237,GO:0044238,GO:0044421,GO:0051604,GO:0070008,GO:0070011,GO:0071704,GO:0140096,GO:1901564,GO:2001070 - 0.0002182 53.0
DYD2_k127_1800237_5 CarboxypepD_reg-like domain - - - 0.0002645 52.0
DYD2_k127_180811_0 Catalyzes the attachment of proline to tRNA(Pro) in a two-step reaction proline is first activated by ATP to form Pro- AMP and then transferred to the acceptor end of tRNA(Pro) K01881 - 6.1.1.15 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004056 525.0
DYD2_k127_180811_1 Methyltransferase domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000002246 271.0
DYD2_k127_180811_2 ergosterol biosynthetic process K02291,K18163 - 2.5.1.32,2.5.1.99 0.000004835 58.0
DYD2_k127_180811_3 TIGRFAM TonB-dependent siderophore receptor K02014 - - 0.000008841 57.0
DYD2_k127_180811_4 Outer membrane receptor for ferrienterochelin and colicins K16089 - - 0.000336 52.0
DYD2_k127_1833494_0 His Kinase A (phosphoacceptor) domain - - - 0.0000000000000000000000000000000008794 149.0
DYD2_k127_1833494_1 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster K00266 - 1.4.1.13,1.4.1.14 0.00000000000007157 77.0
DYD2_k127_1833494_2 Domain of unknown function (DUF4234) - - - 0.000003311 58.0
DYD2_k127_1849048_0 Belongs to the peptidase S8 family - - - 0.00000007518 63.0
DYD2_k127_1849048_1 Helix-turn-helix domain - - - 0.0008138 45.0
DYD2_k127_1887254_0 Belongs to the class-II pyridine nucleotide-disulfide oxidoreductase family K00384 - 1.8.1.9 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003499 402.0
DYD2_k127_1887254_1 PAS domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002825 337.0
DYD2_k127_1887254_10 protein conserved in archaea - - - 0.00000000000000000006176 102.0
DYD2_k127_1887254_11 helix_turn_helix, Lux Regulon K07693 - - 0.0000000000000000182 87.0
DYD2_k127_1887254_12 COG5608 Conserved secreted protein - - - 0.00004086 56.0
DYD2_k127_1887254_13 COG5608 Conserved secreted protein - - - 0.0000665 55.0
DYD2_k127_1887254_2 Domain present in phytochromes and cGMP-specific phosphodiesterases. - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000006866 263.0
DYD2_k127_1887254_3 Calcineurin-like phosphoesterase superfamily domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000275 245.0
DYD2_k127_1887254_4 PFAM Nitroreductase - - - 0.000000000000000000000000000000000000000000000000000000000000001028 230.0
DYD2_k127_1887254_5 Diacylglycerol kinase - - - 0.000000000000000000000000000000000000000000000000000000000000003976 227.0
DYD2_k127_1887254_6 HWE histidine kinase - - - 0.0000000000000000000000000000000000000000000000000000000004328 231.0
DYD2_k127_1887254_7 Protein of unknown function (DUF1684) K09164 - - 0.000000000000000000000000000000000000002129 154.0
DYD2_k127_1887254_8 COG0328 Ribonuclease HI K03469 - 3.1.26.4 0.0000000000000000000000004149 113.0
DYD2_k127_1887254_9 MASE1 - - - 0.0000000000000000000003604 103.0
DYD2_k127_1896056_0 TIGRFAM geranylgeranyl reductase K21401 - 1.3.99.38 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000125 315.0
DYD2_k127_1896056_1 SnoaL-like polyketide cyclase - - - 0.0000001953 64.0
DYD2_k127_1896056_2 - - - - 0.0000007557 60.0
DYD2_k127_1979890_0 Belongs to the peptidase S16 family K04076 - 3.4.21.53 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009801 484.0
DYD2_k127_1979890_1 Cell wall formation. Adds enolpyruvyl to UDP-N- acetylglucosamine K00790 GO:0008150,GO:0040007 2.5.1.7 0.00000000000000000000000000000000000000000000000000000000000000000000000000000001849 278.0
DYD2_k127_1979890_2 X-Pro dipeptidyl-peptidase C-terminal non-catalytic domain K01281 - 3.4.14.11 0.00000000000000000000000000004989 136.0
DYD2_k127_198573_0 A type II topoisomerase that negatively supercoils closed circular double-stranded (ds) DNA in an ATP-dependent manner to modulate DNA topology and maintain chromosomes in an underwound state. Negative supercoiling favors strand separation, and DNA replication, transcription, recombination and repair, all of which involve strand separation. Also able to catalyze the interconversion of other topological isomers of dsDNA rings, including catenanes and knotted rings. Type II topoisomerases break and join 2 DNA strands simultaneously in an ATP-dependent manner K02469 - 5.99.1.3 0.0 1217.0
DYD2_k127_198573_1 A type II topoisomerase that negatively supercoils closed circular double-stranded (ds) DNA in an ATP-dependent manner to modulate DNA topology and maintain chromosomes in an underwound state. Negative supercoiling favors strand separation, and DNA replication, transcription, recombination and repair, all of which involve strand separation. Also able to catalyze the interconversion of other topological isomers of dsDNA rings, including catenanes and knotted rings. Type II topoisomerases break and join 2 DNA strands simultaneously in an ATP-dependent manner K02470 - 5.99.1.3 9.958e-254 797.0
DYD2_k127_198573_10 Belongs to the eukaryotic ribosomal protein eS17 family K02962 GO:0000028,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0006996,GO:0008150,GO:0009987,GO:0015935,GO:0016043,GO:0022607,GO:0022613,GO:0022618,GO:0022626,GO:0022627,GO:0032991,GO:0034622,GO:0042254,GO:0042255,GO:0042274,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043933,GO:0044085,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:0065003,GO:0070925,GO:0071826,GO:0071840,GO:1990904 - 0.000000000005518 72.0
DYD2_k127_198573_11 - - - - 0.0000005113 57.0
DYD2_k127_198573_12 Belongs to the eIF-2B alpha beta delta subunits family K03680 GO:0002181,GO:0002183,GO:0003674,GO:0003676,GO:0003723,GO:0003743,GO:0005085,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005851,GO:0006412,GO:0006413,GO:0006417,GO:0006446,GO:0006518,GO:0006807,GO:0008135,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009889,GO:0009987,GO:0010467,GO:0010468,GO:0010556,GO:0010608,GO:0019222,GO:0019538,GO:0019899,GO:0030234,GO:0031323,GO:0031326,GO:0032045,GO:0032268,GO:0032991,GO:0034248,GO:0034641,GO:0034645,GO:0043043,GO:0043170,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044424,GO:0044444,GO:0044464,GO:0050789,GO:0050790,GO:0050794,GO:0051020,GO:0051171,GO:0051246,GO:0060255,GO:0065007,GO:0065009,GO:0071704,GO:0080090,GO:0097159,GO:0098772,GO:1901363,GO:1901564,GO:1901566,GO:1901576,GO:2000112 - 0.00007829 52.0
DYD2_k127_198573_13 Pkd domain containing protein - - - 0.0001195 52.0
DYD2_k127_198573_2 Aminotransferase class I and II K00812 - 2.6.1.1 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002909 360.0
DYD2_k127_198573_3 Belongs to the ribulose-phosphate 3-epimerase family K01783 GO:0003674,GO:0003824,GO:0004750,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005975,GO:0005996,GO:0006081,GO:0006098,GO:0006139,GO:0006725,GO:0006732,GO:0006733,GO:0006739,GO:0006753,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0009052,GO:0009056,GO:0009117,GO:0009987,GO:0016052,GO:0016853,GO:0016854,GO:0016857,GO:0019321,GO:0019323,GO:0019362,GO:0019637,GO:0019682,GO:0019693,GO:0034641,GO:0043167,GO:0043169,GO:0044237,GO:0044238,GO:0044262,GO:0044281,GO:0044282,GO:0044424,GO:0044444,GO:0044464,GO:0046365,GO:0046483,GO:0046496,GO:0046872,GO:0051156,GO:0051186,GO:0055086,GO:0071704,GO:0072524,GO:1901135,GO:1901360,GO:1901564,GO:1901575 5.1.3.1 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000005555 281.0
DYD2_k127_198573_4 6,7-dimethyl-8-ribityllumazine synthase K00793 - 2.5.1.9 0.000000000000000000000000000000000000000000000000000000002456 214.0
DYD2_k127_198573_5 Catalyzes the conversion of D-ribulose 5-phosphate to formate and 3,4-dihydroxy-2-butanone 4-phosphate K02858 GO:0003674,GO:0003824,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006766,GO:0006767,GO:0006771,GO:0006807,GO:0008150,GO:0008152,GO:0008686,GO:0009058,GO:0009110,GO:0009231,GO:0009987,GO:0016829,GO:0016830,GO:0017144,GO:0018130,GO:0034641,GO:0042364,GO:0042726,GO:0042727,GO:0044237,GO:0044249,GO:0044271,GO:0044281,GO:0044283,GO:0044424,GO:0044464,GO:0046483,GO:0071704,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576 4.1.99.12 0.00000000000000000000000000000000000000000000000000000009785 204.0
DYD2_k127_198573_6 Catalyzes the transfer of the AMP portion of ATP to flavin mononucleotide (FMN) to produce flavin adenine dinucleotide (FAD) coenzyme K14656 GO:0000166,GO:0001882,GO:0001884,GO:0002135,GO:0003674,GO:0003824,GO:0003919,GO:0005488,GO:0005515,GO:0005524,GO:0006139,GO:0006725,GO:0006732,GO:0006747,GO:0006753,GO:0006793,GO:0006796,GO:0006807,GO:0008144,GO:0008150,GO:0008152,GO:0009058,GO:0009108,GO:0009117,GO:0009123,GO:0009161,GO:0009165,GO:0009259,GO:0009987,GO:0010181,GO:0016740,GO:0016772,GO:0016779,GO:0017076,GO:0018130,GO:0019103,GO:0019438,GO:0019637,GO:0019693,GO:0030554,GO:0032549,GO:0032551,GO:0032553,GO:0032555,GO:0032557,GO:0032559,GO:0034641,GO:0034654,GO:0035639,GO:0036094,GO:0042726,GO:0042727,GO:0042802,GO:0042803,GO:0043167,GO:0043168,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0046443,GO:0046444,GO:0046483,GO:0046983,GO:0048037,GO:0050662,GO:0051186,GO:0051188,GO:0055086,GO:0070566,GO:0071704,GO:0072387,GO:0072388,GO:0090407,GO:0097159,GO:0097367,GO:1901135,GO:1901265,GO:1901293,GO:1901360,GO:1901362,GO:1901363,GO:1901564,GO:1901566,GO:1901576 2.7.7.2 0.0000000000000000000000000000000000000000000009957 170.0
DYD2_k127_198573_7 Catalyzes the formation of 6,7-dimethyl-8- ribityllumazine by condensation of 5-amino-6-(D- ribitylamino)uracil with 3,4-dihydroxy-2-butanone 4-phosphate. This is the penultimate step in the biosynthesis of riboflavin K00794 GO:0000906,GO:0003674,GO:0003824,GO:0005575,GO:0005622,GO:0005623,GO:0006766,GO:0006767,GO:0006771,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009110,GO:0009231,GO:0009987,GO:0016740,GO:0016765,GO:0017144,GO:0018130,GO:0034641,GO:0042364,GO:0042726,GO:0042727,GO:0044237,GO:0044249,GO:0044271,GO:0044281,GO:0044283,GO:0044464,GO:0046483,GO:0071704,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576 2.5.1.78 0.00000000000000000000000000019 120.0
DYD2_k127_198573_8 nucleic acid-binding protein, consists of a PIN domain and a Zn-ribbon module K07060 - - 0.0000000000000000003604 94.0
DYD2_k127_198573_9 translation initiation factor activity K03239,K03680 - - 0.0000000000000005139 83.0
DYD2_k127_1997917_0 PFAM FKBP-type peptidyl-prolyl cis-trans isomerase K01802 - 5.2.1.8 0.0000000000000000000000000000000000000000001366 164.0
DYD2_k127_1997917_1 CheB methylesterase K03412 - 3.1.1.61,3.5.1.44 0.0000000000000000000000000000000000000000006251 170.0
DYD2_k127_1997917_2 Type I phosphodiesterase / nucleotide pyrophosphatase - - - 0.0000000000000000000000009432 120.0
DYD2_k127_1997917_3 PAC2 family K06869 - - 0.00000000000000001565 93.0
DYD2_k127_1997917_4 polysaccharide biosynthetic process - - - 0.00000000000000007535 94.0
DYD2_k127_1997917_5 cheY-homologous receiver domain - - - 0.000000000000006489 83.0
DYD2_k127_1997917_6 protein conserved in archaea - - - 0.0000004425 61.0
DYD2_k127_1997917_7 DNA binding protein - - - 0.000002738 58.0
DYD2_k127_2007896_0 PFAM Glucose Sorbosone dehydrogenase - - - 0.000000000000000000000000000000000000000000000000000000000000004138 231.0
DYD2_k127_2007896_1 PFAM PKD domain containing protein - - - 0.00000000000000000000000000000000000017 156.0
DYD2_k127_2007896_2 amino acid activation for nonribosomal peptide biosynthetic process - - - 0.00000000000986 79.0
DYD2_k127_2022375_0 RNA polymerase that catalyzes the synthesis of short RNA molecules used as primers for DNA polymerase during DNA replication K02316 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002599 413.0
DYD2_k127_2022375_1 Sarcosine oxidase K00303 - 1.5.3.1 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006307 364.0
DYD2_k127_2022375_10 Zinc metalloprotease (Elastase) - - - 0.000001431 61.0
DYD2_k127_2022375_11 TonB-dependent receptor - - - 0.00001048 57.0
DYD2_k127_2022375_12 LVIVD repeat - - - 0.00006253 56.0
DYD2_k127_2022375_13 TIGRFAM TonB-dependent siderophore receptor K02014 - - 0.0001828 53.0
DYD2_k127_2022375_2 2Fe-2S iron-sulfur cluster binding domain K00302 - 1.5.3.1 0.000000000000000000000000000000000000000000000000000000000000000000000000999 263.0
DYD2_k127_2022375_3 Predicted membrane protein (DUF2339) - - - 0.00000000000000000000000000000001386 145.0
DYD2_k127_2022375_4 FAD dependent oxidoreductase K00301 - 1.5.3.1 0.0000000000000000000000000008966 114.0
DYD2_k127_2022375_5 BFD-like [2Fe-2S] binding domain - - - 0.000000000000000000000002057 106.0
DYD2_k127_2022375_6 Acetyltransferase (GNAT) domain K03789 - 2.3.1.128 0.0000000000000001068 89.0
DYD2_k127_2022375_7 Uncharacterised protein family UPF0058 - - - 0.000000000000000171 82.0
DYD2_k127_2022375_8 protein conserved in archaea - - - 0.0000000000001453 82.0
DYD2_k127_2022375_9 LVIVD repeat - - - 0.0000003138 64.0
DYD2_k127_202459_0 helicase superfamily c-terminal domain K10896 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001659 511.0
DYD2_k127_202459_1 Belongs to the class-II aminoacyl-tRNA synthetase family. Phe-tRNA synthetase alpha subunit type 2 subfamily K01889 GO:0003674,GO:0003824,GO:0004812,GO:0004826,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006082,GO:0006139,GO:0006399,GO:0006412,GO:0006418,GO:0006432,GO:0006518,GO:0006520,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0016070,GO:0016874,GO:0016875,GO:0019538,GO:0019752,GO:0034641,GO:0034645,GO:0034660,GO:0043038,GO:0043039,GO:0043043,GO:0043170,GO:0043436,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044281,GO:0044424,GO:0044464,GO:0046483,GO:0071704,GO:0090304,GO:0140098,GO:0140101,GO:1901360,GO:1901564,GO:1901566,GO:1901576 6.1.1.20 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002135 445.0
DYD2_k127_202459_10 Involved in the regulation of the intracellular balance of NAD and NADP, and is a key enzyme in the biosynthesis of NADP. Catalyzes specifically the phosphorylation on 2'-hydroxyl of the adenosine moiety of NAD to yield NADP K00858 GO:0000166,GO:0003674,GO:0003824,GO:0003951,GO:0005488,GO:0005524,GO:0006139,GO:0006725,GO:0006732,GO:0006733,GO:0006739,GO:0006741,GO:0006753,GO:0006793,GO:0006796,GO:0006807,GO:0008144,GO:0008150,GO:0008152,GO:0009058,GO:0009108,GO:0009117,GO:0009165,GO:0009987,GO:0016301,GO:0016310,GO:0016311,GO:0016740,GO:0016772,GO:0016773,GO:0016787,GO:0016788,GO:0016791,GO:0017076,GO:0018130,GO:0019178,GO:0019359,GO:0019362,GO:0019363,GO:0019438,GO:0019637,GO:0030554,GO:0032553,GO:0032555,GO:0032559,GO:0034641,GO:0034654,GO:0035639,GO:0036094,GO:0042578,GO:0043167,GO:0043168,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0046483,GO:0046496,GO:0048037,GO:0050662,GO:0051186,GO:0051188,GO:0051287,GO:0055086,GO:0071704,GO:0072524,GO:0072525,GO:0090407,GO:0097159,GO:0097367,GO:1901265,GO:1901293,GO:1901360,GO:1901362,GO:1901363,GO:1901564,GO:1901566,GO:1901576 2.7.1.23 0.000000000000000000000000000000000000000000000000000001972 203.0
DYD2_k127_202459_11 Ring cyclization and eight-electron oxidation of 3a-(2- amino-2-carboxyethyl)-4,5-dioxo-4,5,6,7,8,9-hexahydroquinoline- 7,9-dicarboxylic-acid to PQQ K06137 GO:0005575,GO:0005576 1.3.3.11 0.00000000000000000000000000000000000000000000000000001743 196.0
DYD2_k127_202459_12 Functions by promoting the formation of the first peptide bond K03263 - - 0.00000000000000000000000000000000000000009587 157.0
DYD2_k127_202459_13 Inositol monophosphatase family K01092 - 3.1.3.25 0.0000000000000000000000000000000000000009004 158.0
DYD2_k127_202459_14 metal-dependent protease of the PAD1 JAB1 superfamily - - - 0.00000000000000000000000000000000191 135.0
DYD2_k127_202459_15 VIT family - - - 0.0000000000000000000000000000001218 130.0
DYD2_k127_202459_16 binds to the 23S rRNA K02929 GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0015934,GO:0022625,GO:0022626,GO:0032991,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:1990904 - 0.00000000000000000000000000002235 119.0
DYD2_k127_202459_17 metallopeptidase activity - - - 0.00000000000000000000000000005859 127.0
DYD2_k127_202459_18 TraB family - - - 0.000000000000000000000000000206 131.0
DYD2_k127_202459_19 - - - - 0.00000000000000000000001484 116.0
DYD2_k127_202459_2 Citrate synthase, C-terminal domain K01647 - 2.3.3.1 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001637 388.0
DYD2_k127_202459_20 Archaeal Peptidase A24 C-terminus Type II K07991 - 3.4.23.52 0.0000000000000000000022 104.0
DYD2_k127_202459_21 membrane protein (homolog of Drosophila rhomboid) - - - 0.000000000000000005076 96.0
DYD2_k127_202459_22 aminotransferase class I and II K00812,K10907,K14260,K14261,K14267 - 2.6.1.1,2.6.1.17,2.6.1.2,2.6.1.66 0.0000000000000000108 86.0
DYD2_k127_202459_23 helix_turn_helix, Arsenical Resistance Operon Repressor - - - 0.0000000000000002606 86.0
DYD2_k127_202459_24 Ribosomal protein S27E K02978 - - 0.00000000000001689 74.0
DYD2_k127_202459_25 Sterol carrier protein - - - 0.0000000000003384 76.0
DYD2_k127_202459_26 Pro-kumamolisin, activation domain - - - 0.00000007179 64.0
DYD2_k127_202459_27 Subtilase family K13276,K17948 GO:0003674,GO:0003824,GO:0005575,GO:0005576,GO:0005623,GO:0016853,GO:0016854,GO:0016857,GO:0030288,GO:0030313,GO:0031975,GO:0042597,GO:0044464 5.1.3.24 0.00001437 56.0
DYD2_k127_202459_3 Belongs to the OMP decarboxylase family. Type 2 subfamily K01591 GO:0003674,GO:0003824,GO:0004590,GO:0006139,GO:0006220,GO:0006221,GO:0006725,GO:0006753,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009117,GO:0009165,GO:0009218,GO:0009220,GO:0009259,GO:0009260,GO:0009987,GO:0016829,GO:0016830,GO:0016831,GO:0018130,GO:0019438,GO:0019637,GO:0019693,GO:0034641,GO:0034654,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0046390,GO:0046483,GO:0055086,GO:0071704,GO:0072527,GO:0072528,GO:0090407,GO:1901135,GO:1901137,GO:1901293,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576 4.1.1.23 0.000000000000000000000000000000000000000000000000000000000000000000000000000000001471 280.0
DYD2_k127_202459_4 D-isomer specific 2-hydroxyacid dehydrogenase K00015,K00090 - 1.1.1.215,1.1.1.26,1.1.1.79,1.1.1.81 0.00000000000000000000000000000000000000000000000000000000000000000000000000003592 271.0
DYD2_k127_202459_5 Amino acid permease K03294 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000005861 269.0
DYD2_k127_202459_6 amine dehydrogenase activity - - - 0.0000000000000000000000000000000000000000000000000000000000000001805 236.0
DYD2_k127_202459_7 - - - - 0.000000000000000000000000000000000000000000000000000000000000434 231.0
DYD2_k127_202459_8 Methyltransferase domain - - - 0.000000000000000000000000000000000000000000000000000000005511 209.0
DYD2_k127_202459_9 COG1502 Phosphatidylserine phosphatidylglycerophosphate cardiolipi n synthases and related enzymes - - - 0.0000000000000000000000000000000000000000000000000000001019 218.0
DYD2_k127_202481_0 COG1078 HD superfamily phosphohydrolases K06885 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000004742 296.0
DYD2_k127_202481_1 Peptidase family M50 - - - 0.000000000000000000000000000000000000000000000000000000000004753 228.0
DYD2_k127_202481_2 peptidyl-prolyl cis-trans isomerase K01802,K03775 - 5.2.1.8 0.00000000000000000000000000000000000000000009673 168.0
DYD2_k127_202481_3 protein conserved in archaea - - - 0.00000000000004751 74.0
DYD2_k127_202481_4 PFAM PKD domain containing protein - - - 0.00003343 56.0
DYD2_k127_202481_5 Repeats in polycystic kidney disease 1 (PKD1) and other proteins - - - 0.00004485 56.0
DYD2_k127_2033864_0 COG2366 Protein related to penicillin acylase K07116 - 3.5.1.97 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005676 590.0
DYD2_k127_2033864_1 Aldehyde dehydrogenase family K00294 - 1.2.1.88 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006209 496.0
DYD2_k127_2033864_10 HicA toxin of bacterial toxin-antitoxin, - - - 0.000002375 54.0
DYD2_k127_2033864_2 COG1668 ABC-type Na efflux pump, permease component - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000002521 281.0
DYD2_k127_2033864_3 ABC-type multidrug transport system, ATPase component K01990 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000002028 260.0
DYD2_k127_2033864_4 COG1668 ABC-type Na efflux pump, permease component - - - 0.0000000000000000000000000000000000000000000000000000005815 205.0
DYD2_k127_2033864_5 catalyzes the demethylation of specific methylglutamate residues introduced into the chemoreceptors (methyl-accepting chemotaxis proteins) by CheR - - - 0.00000000000000000000000000000000000000000000000000007809 207.0
DYD2_k127_2033864_6 X-Pro dipeptidyl-peptidase C-terminal non-catalytic domain - - - 0.0000000000000000000000000000000000000000000000006204 197.0
DYD2_k127_2033864_7 Copper resistance protein CopC K14166 - - 0.000000000000000000001945 109.0
DYD2_k127_2033864_8 protein conserved in archaea - - - 0.000000000000001597 88.0
DYD2_k127_2033864_9 Peptidase family M28 - - - 0.00000000000008566 83.0
DYD2_k127_2038529_0 TIGRFAM peptidase S26B, signal peptidase K13280 - 3.4.21.89 0.0000000006644 73.0
DYD2_k127_2038861_0 Serine/Threonine protein kinases, catalytic domain K12132 - 2.7.11.1 0.00000000000000000000000000000000000000000008072 184.0
DYD2_k127_2038861_1 - - - - 0.0000000000000000000000000009288 131.0
DYD2_k127_2046948_0 Exchanges the guanine residue with 7-cyano-7- deazaguanine (preQ0) at position 15 in the dihydrouridine loop (D- loop) of archaeal tRNAs K18779 GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006139,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0008616,GO:0009058,GO:0009116,GO:0009119,GO:0009163,GO:0009987,GO:0018130,GO:0019438,GO:0034404,GO:0034641,GO:0034654,GO:0042455,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0044283,GO:0044424,GO:0044464,GO:0046116,GO:0046483,GO:0055086,GO:0071704,GO:1901135,GO:1901137,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576,GO:1901657,GO:1901659 2.4.2.48 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008861 488.0
DYD2_k127_2046948_1 Thiolase, N-terminal domain K00626 - 2.3.1.9 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005952 432.0
DYD2_k127_2046948_10 cellulose binding - - - 0.00004194 56.0
DYD2_k127_2046948_2 Belongs to the UPF0219 family K01641 - 2.3.3.10 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001182 428.0
DYD2_k127_2046948_3 Quinolinate synthetase A protein K03517 - 2.5.1.72 0.00000000000000000000000000000000000000000000000000000000000000000000000000003614 289.0
DYD2_k127_2046948_4 DUF35 OB-fold domain, acyl-CoA-associated K07068 - - 0.00000000000000000000000000000000000000000000005349 173.0
DYD2_k127_2046948_5 Belongs to the Nudix hydrolase family K03574 - 3.6.1.55 0.0000000000000000000000000000000000000008737 156.0
DYD2_k127_2046948_6 - - - - 0.00000001906 63.0
DYD2_k127_2046948_7 Domain of unknown function (DUF4332) - - - 0.000001359 60.0
DYD2_k127_2046948_8 - - - - 0.000002067 55.0
DYD2_k127_2046948_9 Acyltransferase - - - 0.00001332 55.0
DYD2_k127_2047259_0 Belongs to the Glu Leu Phe Val dehydrogenases family K00260,K00261,K00262 GO:0003674,GO:0003824,GO:0004352,GO:0004353,GO:0004354,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006082,GO:0006520,GO:0006536,GO:0006537,GO:0006807,GO:0008150,GO:0008152,GO:0008652,GO:0009058,GO:0009064,GO:0009084,GO:0009987,GO:0016053,GO:0016491,GO:0016638,GO:0016639,GO:0019752,GO:0043436,GO:0043648,GO:0043650,GO:0044237,GO:0044238,GO:0044249,GO:0044281,GO:0044283,GO:0044424,GO:0044464,GO:0046394,GO:0055114,GO:0071704,GO:1901564,GO:1901566,GO:1901576,GO:1901605,GO:1901607 1.4.1.2,1.4.1.3,1.4.1.4 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004074 563.0
DYD2_k127_2047259_1 X-Pro dipeptidyl-peptidase C-terminal non-catalytic domain - - - 0.0000000000000000000000000000000000000000000000000006788 206.0
DYD2_k127_2049746_0 Possible Fer4-like domain in RNase L inhibitor, RLI K06174 - - 7.004e-225 711.0
DYD2_k127_2049746_1 protein conserved in archaea - - - 0.0000000004585 68.0
DYD2_k127_2088703_0 PFAM UBA THIF-type NAD FAD binding K21147 - 2.7.7.80,2.8.1.11 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003705 561.0
DYD2_k127_2088703_1 Belongs to the Glu Leu Phe Val dehydrogenases family K00261 - 1.4.1.3 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002988 509.0
DYD2_k127_2088703_10 DNA polymerase alpha chain like domain K04477 - - 0.00000000000000000000000000000000000000000000000000000000001512 213.0
DYD2_k127_2088703_11 1-(5-phosphoribosyl)-5- (5-phosphoribosylamino)methylideneamino imidazole-4-carboxamide isomerase K01814 - 5.3.1.16 0.0000000000000000000000000000000000000000000000000000004285 207.0
DYD2_k127_2088703_12 Belongs to the class-II pyridoxal-phosphate-dependent aminotransferase family. Histidinol-phosphate aminotransferase subfamily K00817 GO:0003674,GO:0003824,GO:0008110,GO:0008483,GO:0016740,GO:0016769 2.6.1.9 0.00000000000000000000000000000000000000000000000000000578 208.0
DYD2_k127_2088703_13 Enoyl-CoA hydratase/isomerase K15866 - 5.3.3.18 0.0000000000000000000000000000000000000000000000000005822 194.0
DYD2_k127_2088703_14 IGPS catalyzes the conversion of PRFAR and glutamine to IGP, AICAR and glutamate. The HisH subunit provides the glutamine amidotransferase activity that produces the ammonia necessary to HisF for the synthesis of IGP and AICAR K02501 - - 0.00000000000000000000000000000000000000000000000198 180.0
DYD2_k127_2088703_15 Histidine biosynthesis bifunctional protein hisIE K11755 - 3.5.4.19,3.6.1.31 0.00000000000000000000000000000000000000000000003786 177.0
DYD2_k127_2088703_16 Imidazoleglycerol-phosphate dehydratase K01693 - 4.2.1.19 0.0000000000000000000000000000000000000000000005356 171.0
DYD2_k127_2088703_17 PFAM thioesterase superfamily - - - 0.000000000000000000000000000000000000007175 154.0
DYD2_k127_2088703_18 Ferredoxin - - - 0.000000000000000000000000000009213 123.0
DYD2_k127_2088703_19 - - - - 0.000000007288 66.0
DYD2_k127_2088703_2 Transketolase, pyrimidine binding domain K00162,K00167 - 1.2.4.1,1.2.4.4 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001952 427.0
DYD2_k127_2088703_20 TonB dependent receptor - - - 0.00006653 54.0
DYD2_k127_2088703_21 PFAM blue (type 1) copper domain protein - - - 0.0005274 48.0
DYD2_k127_2088703_3 Catalyzes the radical-mediated insertion of two sulfur atoms into the C-6 and C-8 positions of the octanoyl moiety bound to the lipoyl domains of lipoate-dependent enzymes, thereby converting the octanoylated domains into lipoylated derivatives K03644 GO:0003674,GO:0003824,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006082,GO:0006464,GO:0006629,GO:0006631,GO:0006633,GO:0006732,GO:0006790,GO:0006807,GO:0008150,GO:0008152,GO:0008610,GO:0009058,GO:0009106,GO:0009107,GO:0009108,GO:0009249,GO:0009987,GO:0010467,GO:0016053,GO:0016740,GO:0016782,GO:0016783,GO:0016992,GO:0018065,GO:0018130,GO:0018193,GO:0018205,GO:0019538,GO:0019752,GO:0032787,GO:0036211,GO:0043170,GO:0043412,GO:0043436,GO:0044237,GO:0044238,GO:0044249,GO:0044255,GO:0044260,GO:0044267,GO:0044272,GO:0044281,GO:0044283,GO:0044424,GO:0044464,GO:0046394,GO:0046483,GO:0051186,GO:0051188,GO:0051604,GO:0070283,GO:0071704,GO:0072330,GO:1901360,GO:1901362,GO:1901564,GO:1901576 2.8.1.8 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006308 366.0
DYD2_k127_2088703_4 Dihydrolipoamide acetyltransferase component of pyruvate dehydrogenase complex K00627 - 2.3.1.12 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001004 374.0
DYD2_k127_2088703_5 Catalyzes the reductive methylation of 2'-deoxyuridine- 5'-monophosphate (dUMP) to 2'-deoxythymidine-5'-monophosphate (dTMP) while utilizing 5,10-methylenetetrahydrofolate (mTHF) as the methyl donor, and NADPH and FADH(2) as the reductant - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003385 373.0
DYD2_k127_2088703_6 Catalyzes the sequential NAD-dependent oxidations of L- histidinol to L-histidinaldehyde and then to L-histidine K00013 GO:0000105,GO:0003674,GO:0003824,GO:0004399,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006082,GO:0006520,GO:0006547,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0008652,GO:0009058,GO:0009987,GO:0016053,GO:0016491,GO:0016614,GO:0016616,GO:0018130,GO:0019438,GO:0019752,GO:0034641,GO:0043436,GO:0044237,GO:0044238,GO:0044249,GO:0044281,GO:0044283,GO:0044424,GO:0044444,GO:0044464,GO:0046394,GO:0046483,GO:0052803,GO:0055114,GO:0071704,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576,GO:1901605,GO:1901607 1.1.1.23 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000467 334.0
DYD2_k127_2088703_7 Dehydrogenase E1 component K00161,K00166 - 1.2.4.1,1.2.4.4 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003871 324.0
DYD2_k127_2088703_8 IGPS catalyzes the conversion of PRFAR and glutamine to IGP, AICAR and glutamate. The HisF subunit catalyzes the cyclization activity that produces IGP and AICAR from PRFAR using the ammonia provided by the HisH subunit K02500 GO:0000107,GO:0003674,GO:0003824,GO:0016740,GO:0016757,GO:0016763 - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000702 307.0
DYD2_k127_2088703_9 Catalyzes the condensation of ATP and 5-phosphoribose 1- diphosphate to form N'-(5'-phosphoribosyl)-ATP (PR-ATP). Has a crucial role in the pathway because the rate of histidine biosynthesis seems to be controlled primarily by regulation of HisG enzymatic activity K00765 - 2.4.2.17 0.00000000000000000000000000000000000000000000000000000000000000000000000000004659 268.0
DYD2_k127_2129757_0 ATPase which is responsible for recognizing, binding, unfolding and translocation of substrate proteins into the archaeal 20S proteasome core particle. Is essential for opening the gate of the 20S proteasome via an interaction with its C- terminus, thereby allowing substrate entry and access to the site of proteolysis. Thus, the C-termini of the proteasomal ATPase function like a 'key in a lock' to induce gate opening and therefore regulate proteolysis. Unfolding activity requires energy from ATP hydrolysis, whereas ATP binding alone promotes ATPase-20S proteasome association which triggers gate opening, and supports translocation of unfolded substrates K03420 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002844 406.0
DYD2_k127_2129757_1 HELICc2 K03722,K10844 - 3.6.4.12 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005021 374.0
DYD2_k127_2129757_2 snRNP Sm proteins K04796 - - 0.000000000000000000989 89.0
DYD2_k127_2129757_3 WD40-like Beta Propeller Repeat - - - 0.0000001816 64.0
DYD2_k127_2147447_0 MASE1 - - - 0.0000000000000000000000000000000000000000000000000000000000000000002873 254.0
DYD2_k127_2147447_1 InterPro IPR014922 - - - 0.00000000000000000000000000000000000000000000000000000000001332 212.0
DYD2_k127_2147447_10 Zinc-binding dehydrogenase K00344 - 1.6.5.5 0.000000000000000000000002546 104.0
DYD2_k127_2147447_11 cheY-homologous receiver domain - - - 0.0000003688 59.0
DYD2_k127_2147447_12 - - - - 0.00003242 49.0
DYD2_k127_2147447_2 RibD C-terminal domain - - - 0.00000000000000000000000000000000000000000000000000005038 193.0
DYD2_k127_2147447_3 peptidase S8 and S53, subtilisin, kexin, sedolisin K17734 - - 0.00000000000000000000000000000000000000000000001141 193.0
DYD2_k127_2147447_4 OsmC-like protein K04063 GO:0003674,GO:0003824,GO:0004601,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006950,GO:0006970,GO:0006972,GO:0006979,GO:0008150,GO:0008152,GO:0009628,GO:0009636,GO:0009987,GO:0016209,GO:0016491,GO:0016684,GO:0033194,GO:0042221,GO:0044424,GO:0044444,GO:0044464,GO:0050896,GO:0051716,GO:0051920,GO:0055114,GO:0070887,GO:0097237,GO:0098754,GO:0098869,GO:1901700,GO:1990748 - 0.000000000000000000000000000000000000000000001923 169.0
DYD2_k127_2147447_5 DSBA-like thioredoxin domain - - - 0.0000000000000000000000000000000000000000001563 169.0
DYD2_k127_2147447_6 Polyketide cyclase / dehydrase and lipid transport - - - 0.000000000000000000000000000000000003712 149.0
DYD2_k127_2147447_7 COG0543 2-polyprenylphenol hydroxylase and related flavodoxin oxidoreductases K00523 - 1.17.1.1 0.000000000000000000000000000000004004 139.0
DYD2_k127_2147447_8 helix_turn_helix, Arsenical Resistance Operon Repressor - - - 0.00000000000000000000000000006991 119.0
DYD2_k127_2147447_9 glyoxalase III activity - - - 0.0000000000000000000000000159 115.0
DYD2_k127_215280_0 ATPase family associated with various cellular activities (AAA) K03924 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003903 372.0
DYD2_k127_215280_1 Belongs to the arginase family K01476 GO:0003674,GO:0003824,GO:0004053,GO:0006082,GO:0006520,GO:0006525,GO:0006807,GO:0008150,GO:0008152,GO:0009064,GO:0009987,GO:0016787,GO:0016810,GO:0016813,GO:0019752,GO:0043436,GO:0044237,GO:0044238,GO:0044281,GO:0071704,GO:1901564,GO:1901605 3.5.3.1 0.000000000000000000000000000000000000000000000000000000000000000000000000000009271 272.0
DYD2_k127_215280_2 Involved in peptidoglycan biosynthesis. Transports lipid-linked peptidoglycan precursors from the inner to the outer leaflet of the cytoplasmic membrane K03980 - - 0.000000000004276 71.0
DYD2_k127_215280_3 protein conserved in archaea - - - 0.000002922 59.0
DYD2_k127_2158378_0 Protein of unknown function (DUF1246) K06863 - 6.3.4.23 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002447 477.0
DYD2_k127_2158378_1 Catalyzes the ATP- and formate-dependent formylation of 5-aminoimidazole-4-carboxamide-1-beta-d-ribofuranosyl 5'- monophosphate (AICAR) to 5-formaminoimidazole-4-carboxamide-1- beta-d-ribofuranosyl 5'-monophosphate (FAICAR) in the absence of folates K06863 - 6.3.4.23 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003829 473.0
DYD2_k127_2158378_10 Secretin and TonB N terminus short domain - - - 0.000003624 59.0
DYD2_k127_2158378_2 Binds directly to 23S rRNA. Probably involved in E site tRNA release K02863 GO:0000470,GO:0003674,GO:0003676,GO:0003723,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0006139,GO:0006364,GO:0006396,GO:0006412,GO:0006518,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0015934,GO:0016070,GO:0016072,GO:0019538,GO:0022613,GO:0022625,GO:0022626,GO:0032991,GO:0034470,GO:0034641,GO:0034645,GO:0034660,GO:0042254,GO:0042273,GO:0043043,GO:0043170,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043603,GO:0043604,GO:0044085,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:0046483,GO:0071704,GO:0071840,GO:0090304,GO:0097159,GO:1901360,GO:1901363,GO:1901564,GO:1901566,GO:1901576,GO:1990904 - 0.000000000000000000000000000000000000000000000000000000000000000000000000000004862 267.0
DYD2_k127_2158378_3 Forms part of the ribosomal stalk, playing a central role in the interaction of the ribosome with GTP-bound translation factors K02864 - - 0.000000000000000000000000000000000000000000000000000000000000000003218 242.0
DYD2_k127_2158378_4 PFAM 8-oxoguanine DNA glycosylase K03660 - 4.2.99.18 0.0000000000000000000000000000000000000000000000000000000003021 213.0
DYD2_k127_2158378_5 Methyltransferase involved in ribosomal biogenesis. Specifically catalyzes the N1-methylation of the pseudouridine corresponding to position 914 in M.jannaschii 16S rRNA K14568 GO:0000154,GO:0000462,GO:0001510,GO:0003674,GO:0003676,GO:0003723,GO:0003824,GO:0005488,GO:0006139,GO:0006364,GO:0006396,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0008168,GO:0008173,GO:0008649,GO:0008757,GO:0009451,GO:0009987,GO:0010467,GO:0016070,GO:0016072,GO:0016740,GO:0016741,GO:0019843,GO:0022613,GO:0030490,GO:0031167,GO:0032259,GO:0034470,GO:0034641,GO:0034660,GO:0042254,GO:0042274,GO:0043170,GO:0043412,GO:0043414,GO:0044085,GO:0044237,GO:0044238,GO:0044260,GO:0046483,GO:0070037,GO:0070475,GO:0071704,GO:0071840,GO:0090304,GO:0097159,GO:0140098,GO:0140102,GO:1901360,GO:1901363 2.1.1.260 0.000000000000000000000000000000000000000000000000000000008697 207.0
DYD2_k127_2158378_6 Belongs to the eukaryotic ribosomal protein eS1 family K02984 GO:0002181,GO:0003674,GO:0003735,GO:0005198,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006412,GO:0006518,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0019538,GO:0034641,GO:0034645,GO:0043043,GO:0043170,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044424,GO:0044444,GO:0044464,GO:0071704,GO:1901564,GO:1901566,GO:1901576 - 0.0000000000000000000000000000000000000000000000000006192 192.0
DYD2_k127_2158378_7 5-formyltetrahydrofolate cyclo-ligase family K01934 - 6.3.3.2 0.00000000000000000000000000000004403 133.0
DYD2_k127_2158378_8 Forms part of the ribosomal stalk, playing a central role in the interaction of the ribosome with GTP-bound translation factors K02869 - - 0.000000000000000000000007735 104.0
DYD2_k127_2167528_0 Amidase K01426 - 3.5.1.4 0.000000000000000000000000000000000000000000000001647 185.0
DYD2_k127_2167528_1 response regulator K02485,K03413 - - 0.00000000000002189 78.0
DYD2_k127_2167528_2 protein conserved in archaea - - - 0.00000000004942 75.0
DYD2_k127_2167528_3 - - - - 0.000002479 60.0
DYD2_k127_21811_0 Sulfur transfer protein involved in thiamine biosynthesis K03154 - - 0.0008962 48.0
DYD2_k127_2225698_0 4 iron, 4 sulfur cluster binding - - - 0.00000000000000000004659 98.0
DYD2_k127_2225698_1 helix_turn_helix, Arsenical Resistance Operon Repressor - - - 0.000000000000000001648 95.0
DYD2_k127_2225698_2 Protein of unknown function (DUF3309) - - - 0.000000000000004266 77.0
DYD2_k127_2225698_3 - - - - 0.00002059 54.0
DYD2_k127_2225698_4 Protein of unknown function (DUF2934) - - - 0.00012 49.0
DYD2_k127_2234904_0 Binds and transfers iron-sulfur (Fe-S) clusters to target apoproteins. Can hydrolyze ATP K03593 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000005521 297.0
DYD2_k127_2234904_1 electron transfer flavoprotein, alpha subunit K03522 - - 0.0000000000000000000000000000000000000000000000000000000000000001338 232.0
DYD2_k127_2234904_10 Pro-kumamolisin, activation domain - - - 0.0004789 52.0
DYD2_k127_2234904_2 RIO-like kinase K07178 - 2.7.11.1 0.00000000000000000000000000000000000000000000000000000000002615 215.0
DYD2_k127_2234904_3 K homology RNA-binding domain K06961 - - 0.000000000000000000000000000000000000000000000001293 184.0
DYD2_k127_2234904_4 Electron transfer flavoprotein domain K03521 - - 0.000000000000000000000000000000000000000000001978 174.0
DYD2_k127_2234904_5 YjgF/chorismate_mutase-like, putative endoribonuclease - - - 0.00000000000000000000000000000000000000000005312 166.0
DYD2_k127_2234904_6 Uncharacterised protein family (UPF0147) K09721 - - 0.00000000000000000000008142 102.0
DYD2_k127_2234904_7 PFAM nitrogen-fixing NifU domain protein - - - 0.00000000000000000002025 93.0
DYD2_k127_2234904_8 TIGRFAM TonB-dependent outer membrane receptor, SusC RagA subfamily, signature region K21573 - - 0.0000003542 61.0
DYD2_k127_2234904_9 - - - - 0.000001232 54.0
DYD2_k127_2238543_0 Belongs to the DEAD box helicase family K05592 - 3.6.4.13 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000147 392.0
DYD2_k127_2238543_1 pfkB family carbohydrate kinase K22026 GO:0000287,GO:0003674,GO:0003824,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005975,GO:0006139,GO:0006725,GO:0006753,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0008906,GO:0009058,GO:0009117,GO:0009165,GO:0009987,GO:0016301,GO:0016310,GO:0016740,GO:0016772,GO:0016773,GO:0018130,GO:0019200,GO:0019205,GO:0019206,GO:0019438,GO:0019637,GO:0034641,GO:0034654,GO:0043167,GO:0043169,GO:0044237,GO:0044238,GO:0044249,GO:0044262,GO:0044271,GO:0044281,GO:0044424,GO:0044464,GO:0046483,GO:0046835,GO:0046872,GO:0055086,GO:0071704,GO:0090407,GO:1901293,GO:1901360,GO:1901362,GO:1901576 2.7.1.213,2.7.1.73 0.00000000000000000000000002564 115.0
DYD2_k127_2238543_2 Alpha/beta hydrolase family K06889 - - 0.00004162 56.0
DYD2_k127_2260500_0 Belongs to the malate synthase family K01638 - 2.3.3.9 4.972e-225 708.0
DYD2_k127_2260500_1 Isocitrate lyase K01637 - 4.1.3.1 1.866e-207 661.0
DYD2_k127_2260500_10 Belongs to the acetylglutamate kinase family. LysZ subfamily K05828 GO:0003674,GO:0003824,GO:0003991,GO:0005488,GO:0006082,GO:0006520,GO:0006525,GO:0006526,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0008652,GO:0009058,GO:0009064,GO:0009084,GO:0009987,GO:0016053,GO:0016301,GO:0016310,GO:0016597,GO:0016740,GO:0016772,GO:0016774,GO:0019752,GO:0031406,GO:0034618,GO:0036094,GO:0043167,GO:0043168,GO:0043169,GO:0043177,GO:0043436,GO:0044237,GO:0044238,GO:0044249,GO:0044281,GO:0044283,GO:0046394,GO:0071704,GO:1901564,GO:1901566,GO:1901576,GO:1901605,GO:1901607 - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000001447 282.0
DYD2_k127_2260500_11 NADP oxidoreductase coenzyme F420-dependent K06988 - 1.5.1.40 0.0000000000000000000000000000000000000000000000000000000000000000000000000002671 261.0
DYD2_k127_2260500_12 Proton-conducting membrane transporter K12141 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000001494 271.0
DYD2_k127_2260500_13 Formate hydrogenlyase subunit 3 Multisubunit Na H antiporter, MnhD subunit K05568 - - 0.0000000000000000000000000000000000000000000000000001355 207.0
DYD2_k127_2260500_14 NADH ubiquinone oxidoreductase, 20 Kd subunit - - - 0.000000000000000000000000000000000000000000001236 174.0
DYD2_k127_2260500_15 membrane transporter protein K07090 - - 0.0000000000000000000000000000000000000000007697 167.0
DYD2_k127_2260500_16 NADH dehydrogenase - - - 0.000000000000000000000000000000000000000001215 171.0
DYD2_k127_2260500_17 COG1522 Transcriptional regulators - - - 0.0000000000000000000000000000002212 129.0
DYD2_k127_2260500_18 Thioredoxin K03671 - - 0.00000000000000000000000009353 111.0
DYD2_k127_2260500_19 COG0346 Lactoylglutathione lyase and related lyases K01759 - 4.4.1.5 0.0000000000000000008844 92.0
DYD2_k127_2260500_2 Fe-S oxidoreductase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003173 522.0
DYD2_k127_2260500_20 High-affinity nickel-transport protein K07241 - - 0.00000000000000000129 94.0
DYD2_k127_2260500_21 hydrogenase 4 membrane K12140 - - 0.000000000000000001695 99.0
DYD2_k127_2260500_22 Transcriptional regulator, ArsR family - - - 0.00000000000001391 88.0
DYD2_k127_2260500_23 TIGRFAM lysine biosynthesis protein LysW K05826 - - 0.00000000000001648 81.0
DYD2_k127_2260500_24 ACT domain protein - - - 0.00000000000005347 77.0
DYD2_k127_2260500_25 - K00176,K07138 - 1.2.7.3 0.00000009578 55.0
DYD2_k127_2260500_3 Catalyzes the formation of S-adenosylmethionine (AdoMet) from methionine and ATP. The overall synthetic reaction is composed of two sequential steps, AdoMet formation and the subsequent tripolyphosphate hydrolysis which occurs prior to release of AdoMet from the enzyme K00789 GO:0003674,GO:0003824,GO:0004478,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0016740,GO:0016765,GO:0044424,GO:0044444,GO:0044464 2.5.1.6 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001085 489.0
DYD2_k127_2260500_4 PFAM Sulfate transporter antisigma-factor antagonist STAS K03321 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006924 496.0
DYD2_k127_2260500_5 Catalyzes the NADPH-dependent reduction of LysW - aminoadipate 6-phosphate to yield LysW -aminoadipate 6- semialdehyde K05829 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000377 396.0
DYD2_k127_2260500_6 homocitrate synthase activity K01649 - 2.3.3.13 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006373 340.0
DYD2_k127_2260500_7 PFAM ATP-dependent carboxylate-amine ligase domain protein, ATP-grasp K05827 - 6.3.2.43 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001561 327.0
DYD2_k127_2260500_8 Catalyzes the transfer of the amino group of L-glutamate to LysW -aminoadipate 6-semialdehyde, generating LysW -gamma-L- lysine K05830 GO:0003674,GO:0005488,GO:0005515,GO:0008144,GO:0019842,GO:0030170,GO:0036094,GO:0042802,GO:0043167,GO:0043168,GO:0048037,GO:0050662,GO:0070279,GO:0097159,GO:1901363 - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000311 316.0
DYD2_k127_2260500_9 Respiratory-chain NADH dehydrogenase, 30 Kd subunit - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000007986 298.0
DYD2_k127_2274005_0 pyruvate flavodoxin ferredoxin oxidoreductase K00174 - 1.2.7.11,1.2.7.3 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001396 556.0
DYD2_k127_2274005_1 Pyruvate ferredoxin oxidoreductase beta subunit C terminal K00175 - 1.2.7.11,1.2.7.3 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007598 394.0
DYD2_k127_2274005_10 protein conserved in archaea - - - 0.000000000000004107 90.0
DYD2_k127_2274005_11 - - - - 0.00000000005452 72.0
DYD2_k127_2274005_12 ABC-2 family transporter protein K01992 - - 0.0000000002142 73.0
DYD2_k127_2274005_13 Lycopene cyclase protein - - - 0.000000008055 67.0
DYD2_k127_2274005_14 glucose sorbosone - - - 0.00000001973 65.0
DYD2_k127_2274005_15 - - - - 0.0000005306 62.0
DYD2_k127_2274005_17 - - - - 0.0001507 54.0
DYD2_k127_2274005_18 LVIVD repeat - - - 0.0002673 53.0
DYD2_k127_2274005_19 alpha-amylase K01176 - 3.2.1.1 0.0002731 54.0
DYD2_k127_2274005_2 PFAM Aminotransferase class-III K00821 - 2.6.1.11,2.6.1.17 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008393 373.0
DYD2_k127_2274005_3 Catalyzes two activities which are involved in the cyclic version of arginine biosynthesis the synthesis of N- acetylglutamate from glutamate and acetyl-CoA as the acetyl donor, and of ornithine by transacetylation between N(2)-acetylornithine and glutamate K00620 - 2.3.1.1,2.3.1.35 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002439 370.0
DYD2_k127_2274005_4 Catalyzes the NADPH-dependent reduction of N-acetyl-5- glutamyl phosphate to yield N-acetyl-L-glutamate 5-semialdehyde K00145 - 1.2.1.38 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001129 331.0
DYD2_k127_2274005_5 ATPase activity K01990,K19340 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000002233 267.0
DYD2_k127_2274005_6 AAA domain, putative AbiEii toxin, Type IV TA system K01990 - - 0.000000000000000000000000000000000000000000000000000000000000000000000001101 256.0
DYD2_k127_2274005_7 Belongs to the acetylglutamate kinase family. ArgB subfamily K00930 - 2.7.2.8 0.00000000000000000000000000000000000000000000000000000003824 205.0
DYD2_k127_2274005_8 Amino acid permease K03294 - - 0.00000000000000000000000000000000000000000000000001255 194.0
DYD2_k127_2274005_9 aminotransferase class I and II - - - 0.0000000000000000000001422 110.0
DYD2_k127_229829_0 Belongs to the enoyl-CoA hydratase isomerase family - - - 0.000000000000000000000000000000000003834 149.0
DYD2_k127_229829_1 Kelch repeat protein - - - 0.000000001078 61.0
DYD2_k127_229829_2 Belongs to the glycosyl hydrolase 8 (cellulase D) family - - - 0.000001077 61.0
DYD2_k127_229829_3 Galactose oxidase, central domain - - - 0.00003266 51.0
DYD2_k127_2375242_0 DEAD/H associated K03724 - - 5.444e-232 752.0
DYD2_k127_2375242_1 Fructose-bisphosphate aldolase class-II - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004079 459.0
DYD2_k127_2375242_10 LVIVD repeat - - - 0.000000000000000007026 97.0
DYD2_k127_2375242_11 EamA-like transporter family - - - 0.00000000000007962 82.0
DYD2_k127_2375242_12 domain, Protein - - - 0.000000000004365 80.0
DYD2_k127_2375242_13 but it may be involved in stabilization of the trimeric complex - - - 0.00000000001512 67.0
DYD2_k127_2375242_14 Winged helix DNA-binding domain - - - 0.00000000006132 72.0
DYD2_k127_2375242_15 PFAM TonB-dependent receptor plug - - - 0.000007277 58.0
DYD2_k127_2375242_16 - - - - 0.0007299 50.0
DYD2_k127_2375242_2 Belongs to the class-I aminoacyl-tRNA synthetase family K04566 - 6.1.1.6 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000288 459.0
DYD2_k127_2375242_3 6-phosphofructokinase activity K00850,K21071 - 2.7.1.11,2.7.1.90 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001548 356.0
DYD2_k127_2375242_4 Involved in targeting and insertion of nascent membrane proteins into the cytoplasmic membrane. Acts as a receptor for the complex formed by the signal recognition particle (SRP) and the ribosome-nascent chain (RNC) K03110 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002396 341.0
DYD2_k127_2375242_5 Voltage gated chloride channel K03281 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000295 321.0
DYD2_k127_2375242_6 Specifically catalyzes the NAD or NADP-dependent dehydrogenation of L-aspartate to iminoaspartate K06989 - 1.4.1.21 0.000000000000000000000000000000000000000000000000000000000000000004885 233.0
DYD2_k127_2375242_7 PFAM Major Facilitator Superfamily - - - 0.0000000000000000000000000000000000000000006905 172.0
DYD2_k127_2375242_8 Peptidase inhibitor I9 K17734 - - 0.00000000000000000000000000000000000000003914 171.0
DYD2_k127_2375242_9 1-(5-phosphoribosyl)-5- (5-phosphoribosylamino)methylideneamino imidazole-4-carboxamide isomerase K01814 - 5.3.1.16 0.0000000000000000000000000000001081 133.0
DYD2_k127_2375661_0 Alanine-glyoxylate amino-transferase K05825 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008641 395.0
DYD2_k127_2375661_1 Sodium hydrogen exchanger K11105 - - 0.000000000000000000000000000000000001164 154.0
DYD2_k127_2375661_2 Part of the twin-arginine translocation (Tat) system that transports large folded proteins containing a characteristic twin-arginine motif in their signal peptide across membranes. Together with TatB, TatC is part of a receptor directly interacting with Tat signal peptides K03118 - - 0.000000000000000000002156 105.0
DYD2_k127_2382770_0 TIGRFAM Ammonium transporter K03320 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001421 469.0
DYD2_k127_2382770_1 MoeA N-terminal region (domain I and II) K03750,K07219 - 2.10.1.1 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000004847 293.0
DYD2_k127_2382770_2 May be involved in the biosynthesis of molybdopterin K03638,K03831 - 2.7.7.75 0.0000000000000000000000000000001265 128.0
DYD2_k127_2382770_3 Part of the twin-arginine translocation (Tat) system that transports large folded proteins containing a characteristic twin-arginine motif in their signal peptide across membranes. TatA could form the protein-conducting channel of the Tat system K03116 - - 0.000000008375 62.0
DYD2_k127_2382770_4 cobalamin-transporting ATPase activity - - - 0.0000258 55.0
DYD2_k127_2382770_5 Carboxypeptidase regulatory-like domain - - - 0.00006442 54.0
DYD2_k127_2405480_0 Specifically catalyzes the AdoMet-dependent 2'-O-ribose methylation of cytidine at position 56 in tRNAs K07254 GO:0001510,GO:0002128,GO:0003674,GO:0003824,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006139,GO:0006396,GO:0006399,GO:0006400,GO:0006725,GO:0006807,GO:0008033,GO:0008150,GO:0008152,GO:0008168,GO:0008173,GO:0008175,GO:0009451,GO:0009987,GO:0010467,GO:0016070,GO:0016740,GO:0016741,GO:0030488,GO:0032259,GO:0034470,GO:0034641,GO:0034660,GO:0043170,GO:0043412,GO:0043414,GO:0044237,GO:0044238,GO:0044260,GO:0044424,GO:0044464,GO:0046483,GO:0071704,GO:0090304,GO:0140098,GO:0140101,GO:1901360 2.1.1.206 0.00000000000000000000000000000000000000000000000000002785 203.0
DYD2_k127_2405480_1 Catalyzes the CTP-dependent phosphorylation of riboflavin (vitamin B2) to form flavin mononucleotide (FMN) K07732 - 2.7.1.161 0.0000000000000000000000000000000000000000000000000001972 192.0
DYD2_k127_2405480_10 TonB dependent receptor K02014 - - 0.000001323 60.0
DYD2_k127_2405480_2 Zinc carboxypeptidase - - - 0.00000000000000000000000000000000000000000000001399 195.0
DYD2_k127_2405480_3 Zinc carboxypeptidase - - - 0.000000000000000000000000000000000000008337 167.0
DYD2_k127_2405480_4 Thioredoxin K03671 - - 0.00000000000000000000000000000000003723 139.0
DYD2_k127_2405480_5 Specifically catalyzes the AdoMet-dependent 2'-O-ribose methylation of cytidine at position 56 in tRNAs K07254 - 2.1.1.206 0.0000000000000000000000000000000002012 139.0
DYD2_k127_2405480_6 Transcription factor that plays a role in the activation of archaeal genes transcribed by RNA polymerase. Facilitates transcription initiation by enhancing TATA-box recognition by TATA-box-binding protein (Tbp), and transcription factor B (Tfb) and RNA polymerase recruitment. Not absolutely required for transcription in vitro, but particularly important in cases where Tbp or Tfb function is not optimal. It dynamically alters the nucleic acid-binding properties of RNA polymerases by stabilizing the initiation complex and destabilizing elongation complexes. Seems to translocate with the RNA polymerase following initiation and acts by binding to the non template strand of the transcription bubble in elongation complexes K03136 - - 0.0000000000000000000004285 102.0
DYD2_k127_2405480_7 Bifunctional nuclease K08999 - - 0.0000000000000000005727 94.0
DYD2_k127_2405480_8 nucleotide metabolic process - - - 0.00000000000002403 75.0
DYD2_k127_2405480_9 domain protein - - - 0.00000007411 64.0
DYD2_k127_2482010_0 Protein of unknown function (DUF4256) - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000001515 278.0
DYD2_k127_2482010_1 protein conserved in archaea - - - 0.0000005522 59.0
DYD2_k127_2491748_0 Thioesterase-like superfamily K07107 - - 0.000000000000002108 79.0
DYD2_k127_2507249_0 inositol-3-phosphate synthase activity K01858 GO:0003674,GO:0003824,GO:0004512,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006790,GO:0008150,GO:0008152,GO:0008270,GO:0009058,GO:0009405,GO:0009987,GO:0010125,GO:0010126,GO:0016137,GO:0016138,GO:0016853,GO:0016872,GO:0043167,GO:0043169,GO:0044237,GO:0044249,GO:0044272,GO:0044419,GO:0044424,GO:0044444,GO:0044464,GO:0046872,GO:0046914,GO:0051186,GO:0051188,GO:0051704,GO:0071704,GO:1901135,GO:1901137,GO:1901576,GO:1901657,GO:1901659 5.5.1.4 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009795 493.0
DYD2_k127_2507249_1 Belongs to the CDP-alcohol phosphatidyltransferase class-I family K00995 - 2.7.8.5 0.00000000007411 66.0
DYD2_k127_2537354_0 PFAM Filamentation induced by cAMP death on - - - 0.000000000000002017 88.0
DYD2_k127_2545383_0 X-Pro dipeptidyl-peptidase C-terminal non-catalytic domain - - - 0.000000000000000000000000000000000000000001049 178.0
DYD2_k127_2545383_1 Serine threonine protein kinase K12132 - 2.7.11.1 0.00000000000000000000000000000000000000002137 174.0
DYD2_k127_2545383_2 Serine/Threonine protein kinases, catalytic domain K12132 - 2.7.11.1 0.0000000000000000000000000000000000006102 160.0
DYD2_k127_2545383_5 FHA domain protein - GO:0005575,GO:0005576,GO:0005623,GO:0005886,GO:0006950,GO:0006979,GO:0008150,GO:0009987,GO:0016020,GO:0040007,GO:0044110,GO:0044116,GO:0044117,GO:0044119,GO:0044403,GO:0044419,GO:0044464,GO:0050896,GO:0051301,GO:0051704,GO:0071944 - 0.00000000003044 72.0
DYD2_k127_2545383_6 exo-alpha-(2->6)-sialidase activity - - - 0.0000001667 64.0
DYD2_k127_2545383_7 Serine/threonine phosphatases, family 2C, catalytic domain K20074 - 3.1.3.16 0.0000003275 61.0
DYD2_k127_2545383_8 GAF domain - - - 0.000008277 56.0
DYD2_k127_2545685_0 - - - - 0.0000000000000000000000000008735 130.0
DYD2_k127_2545685_1 - - - - 0.00000000000000000000000001555 126.0
DYD2_k127_2545685_2 protein conserved in archaea - - - 0.0000006405 62.0
DYD2_k127_2545685_3 Winged helix-turn-helix DNA-binding - - - 0.000001505 61.0
DYD2_k127_2546164_0 Domain of unknown function (DU1801) - - - 0.0000000000000000000000000000000005634 147.0
DYD2_k127_2555004_0 sulfurtransferase K01011 - 2.8.1.1,2.8.1.2 0.000000000000000000000000000000000000000000000000000000000000000000000002595 255.0
DYD2_k127_2555004_1 permease - - - 0.000000000000000000000000000000000000000000001234 180.0
DYD2_k127_2555004_2 VIT family - - - 0.00000000000000000000004798 109.0
DYD2_k127_2555004_3 LVIVD repeat-containing protein - - - 0.0001668 54.0
DYD2_k127_2573983_0 dipeptidyl-peptidase K01281 - 3.4.14.11 0.0000000000000000000000000000000000005283 159.0
DYD2_k127_2585530_0 X-Pro dipeptidyl-peptidase C-terminal non-catalytic domain K01281 - 3.4.14.11 0.000000000000000000000000000000000003445 156.0
DYD2_k127_2593878_0 Catalyzes the cyclization of GTP to (8S)-3',8-cyclo-7,8- dihydroguanosine 5'-triphosphate K03639 - 4.1.99.22 0.000000000000000000000001357 107.0
DYD2_k127_2611300_0 Archaeal Nre, N-terminal - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000002 298.0
DYD2_k127_2613821_0 Protein of unknown function DUF58 - - - 0.0000000000000000000000000000000003655 141.0
DYD2_k127_2613821_1 COG3794 Plastocyanin - - - 0.0000000000000003823 89.0
DYD2_k127_2613821_2 - - - - 0.000000005066 61.0
DYD2_k127_2635641_0 COG4948 L-alanine-DL-glutamate epimerase and related enzymes of enolase superfamily K19802 - 5.1.1.20 0.0000000000000000000000000000000000000000000000000000000000006189 227.0
DYD2_k127_2635641_1 PFAM SMP-30 Gluconolaconase - - - 0.0000008761 60.0
DYD2_k127_2635641_2 CarboxypepD_reg-like domain - - - 0.0004005 51.0
DYD2_k127_2635641_3 Domain of unknown function (DUF1611_N) Rossmann-like domain - - - 0.0009201 45.0
DYD2_k127_2640826_0 Site-specific tyrosine recombinase, which acts by catalyzing the cutting and rejoining of the recombining DNA molecules K03733,K04763 - - 0.0000000000000000000000000000000000000000000000000000000000000000000003776 247.0
DYD2_k127_2649553_0 deoxyhypusine monooxygenase activity K01387 - 3.4.24.3 0.000000003891 70.0
DYD2_k127_2661684_0 His Kinase A (phosphoacceptor) domain K13924 - 2.1.1.80,3.1.1.61 0.0000000000000000000000000000000000000000000000000000000003501 229.0
DYD2_k127_2661684_1 Integral membrane sensor signal transduction histidine kinase - - - 0.0000000000000000000000000000000000000000000001767 185.0
DYD2_k127_2661684_2 - - - - 0.000000000000000000005242 108.0
DYD2_k127_2661684_3 protein conserved in archaea - - - 0.00000000000000003797 88.0
DYD2_k127_2661684_4 Domain of unknown function (DUF4382) - - - 0.00000000000001263 83.0
DYD2_k127_2661684_5 TfoX N-terminal domain - - - 0.00000000000148 73.0
DYD2_k127_2661684_6 CAAX protease self-immunity K07052 - - 0.000000000005164 75.0
DYD2_k127_2661684_7 protein conserved in archaea - - - 0.000000000007364 78.0
DYD2_k127_271989_0 bifunctional purine biosynthesis protein purh K00602 GO:0003674,GO:0003824,GO:0004643,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006139,GO:0006163,GO:0006164,GO:0006725,GO:0006753,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009117,GO:0009150,GO:0009152,GO:0009165,GO:0009259,GO:0009260,GO:0009987,GO:0016740,GO:0016741,GO:0016742,GO:0018130,GO:0019438,GO:0019637,GO:0019693,GO:0034641,GO:0034654,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0044424,GO:0044444,GO:0044464,GO:0046390,GO:0046483,GO:0055086,GO:0071704,GO:0072521,GO:0072522,GO:0090407,GO:1901135,GO:1901137,GO:1901293,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576 2.1.2.3,3.5.4.10 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000024 523.0
DYD2_k127_271989_1 Involved in targeting and insertion of nascent membrane proteins into the cytoplasmic membrane. Binds to the hydrophobic signal sequence of the ribosome-nascent chain (RNC) as it emerges from the ribosomes. The SRP-RNC complex is then targeted to the cytoplasmic membrane where it interacts with the SRP receptor FtsY K03106 - 3.6.5.4 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003487 493.0
DYD2_k127_271989_2 FIST C domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008497 431.0
DYD2_k127_271989_3 dienelactone hydrolase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001276 385.0
DYD2_k127_271989_4 Belongs to the folylpolyglutamate synthase family K11754 - 6.3.2.12,6.3.2.17 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000007361 294.0
DYD2_k127_271989_5 Pterin binding enzyme K00796 - 2.5.1.15 0.00000000000000000000000000000000000000000000000000000000000000000000000002466 260.0
DYD2_k127_271989_6 Catalyzes the transfer of a formyl group from 10- formyltetrahydrofolate to 5-phospho-ribosyl-glycinamide (GAR), producing 5-phospho-ribosyl-N-formylglycinamide (FGAR) and tetrahydrofolate K11175 - 2.1.2.2 0.000000000000000000000000000000000000000000000000000000000000001339 225.0
DYD2_k127_271989_7 PAS fold - - - 0.000000000000000000000000000000000000000000000000000008133 214.0
DYD2_k127_271989_8 Specifically catalyzes the N1-methylation of pseudouridine at position 54 (Psi54) in tRNAs K16317 GO:0001510,GO:0003674,GO:0003824,GO:0006139,GO:0006396,GO:0006399,GO:0006400,GO:0006725,GO:0006807,GO:0008033,GO:0008150,GO:0008152,GO:0008168,GO:0008173,GO:0008175,GO:0009451,GO:0009987,GO:0010467,GO:0016070,GO:0016740,GO:0016741,GO:0030488,GO:0032259,GO:0034470,GO:0034641,GO:0034660,GO:0043170,GO:0043412,GO:0043414,GO:0044237,GO:0044238,GO:0044260,GO:0046483,GO:0071704,GO:0090304,GO:0140098,GO:0140101,GO:1901360 2.1.1.257 0.0000000000000000001614 93.0
DYD2_k127_2729434_0 PhoQ Sensor - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003469 518.0
DYD2_k127_2729434_1 COG0665 Glycine D-amino acid oxidases (deaminating) K00303 - 1.5.3.1 0.00000000000000000000000000000000000006823 155.0
DYD2_k127_2730162_0 The beta subunit is responsible for the synthesis of L- tryptophan from indole and L-serine K01696 - 4.2.1.20 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003501 503.0
DYD2_k127_2730162_1 Part of a heterotetrameric complex that catalyzes the two-step biosynthesis of anthranilate, an intermediate in the biosynthesis of L-tryptophan. In the first step, the glutamine- binding beta subunit (TrpG) of anthranilate synthase (AS) provides the glutamine amidotransferase activity which generates ammonia as a substrate that, along with chorismate, is used in the second step, catalyzed by the large alpha subunit of AS (TrpE) to produce anthranilate. In the absence of TrpG, TrpE can synthesize anthranilate directly from chorismate and high concentrations of ammonia K01657 - 4.1.3.27 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000353 379.0
DYD2_k127_2730162_10 Catalyzes the NADPH-dependent reduction of ketopantoate into pantoic acid K00077 - 1.1.1.169 0.0000000000000000000000000000000000000000000000000000000000000001552 232.0
DYD2_k127_2730162_11 synthase K01658 - 4.1.3.27 0.0000000000000000000000000000000000000000000000000000000000001716 228.0
DYD2_k127_2730162_12 The alpha subunit is responsible for the aldol cleavage of indoleglycerol phosphate to indole and glyceraldehyde 3- phosphate K01695 - 4.2.1.20 0.000000000000000000000000000000000000000000000000000000002205 210.0
DYD2_k127_2730162_13 PFAM Indole-3-glycerol phosphate synthase K01609 - 4.1.1.48 0.0000000000000000000000000000000000000367 153.0
DYD2_k127_2730162_14 Involved in the biosynthesis of the chorismate, which leads to the biosynthesis of aromatic amino acids. Catalyzes the reversible NADPH linked reduction of 3-dehydroshikimate (DHSA) to yield shikimate (SA) K13832 - 1.1.1.25,4.2.1.10 0.000000000000000000000000000000002799 146.0
DYD2_k127_2730162_15 shikimate kinase activity K00891 - 2.7.1.71 0.00000000000000000000000000001694 134.0
DYD2_k127_2730162_16 Amidohydrolase family - - - 0.000000000000000000000000001825 126.0
DYD2_k127_2730162_17 - - - - 0.00002466 51.0
DYD2_k127_2730162_2 Belongs to the aspartate-semialdehyde dehydrogenase family K00133 - 1.2.1.11 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002974 368.0
DYD2_k127_2730162_3 Catalyzes the anti-1,4-elimination of the C-3 phosphate and the C-6 proR hydrogen from 5-enolpyruvylshikimate-3-phosphate (EPSP) to yield chorismate, which is the branch point compound that serves as the starting substrate for the three terminal pathways of aromatic amino acid biosynthesis. This reaction introduces a second double bond into the aromatic ring system K01736 GO:0000166,GO:0003674,GO:0003824,GO:0004107,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006082,GO:0006520,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0008652,GO:0009058,GO:0009072,GO:0009073,GO:0009423,GO:0009987,GO:0010181,GO:0016053,GO:0016829,GO:0016835,GO:0016838,GO:0019438,GO:0019752,GO:0032553,GO:0036094,GO:0043167,GO:0043168,GO:0043436,GO:0043648,GO:0043650,GO:0044237,GO:0044238,GO:0044249,GO:0044281,GO:0044283,GO:0044424,GO:0044444,GO:0044464,GO:0046394,GO:0046417,GO:0048037,GO:0050662,GO:0071704,GO:0097159,GO:0097367,GO:1901265,GO:1901360,GO:1901362,GO:1901363,GO:1901564,GO:1901566,GO:1901576 4.2.3.5 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009545 322.0
DYD2_k127_2730162_4 Catalyzes the transfer of the phosphoribosyl group of 5- phosphorylribose-1-pyrophosphate (PRPP) to anthranilate to yield N-(5'-phosphoribosyl)-anthranilate (PRA) K00766 GO:0000162,GO:0003674,GO:0003824,GO:0004048,GO:0006082,GO:0006520,GO:0006568,GO:0006576,GO:0006586,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0008652,GO:0009058,GO:0009072,GO:0009073,GO:0009308,GO:0009309,GO:0009987,GO:0016053,GO:0016740,GO:0016757,GO:0016763,GO:0018130,GO:0019438,GO:0019752,GO:0034641,GO:0042401,GO:0042430,GO:0042435,GO:0043436,GO:0044106,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0044283,GO:0046219,GO:0046394,GO:0046483,GO:0071704,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576,GO:1901605,GO:1901607 2.4.2.18 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001785 317.0
DYD2_k127_2730162_5 Belongs to the aspartokinase family K00928 GO:0003674,GO:0003824,GO:0004072,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006082,GO:0006520,GO:0006553,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0008652,GO:0009058,GO:0009066,GO:0009067,GO:0009085,GO:0009089,GO:0009987,GO:0016053,GO:0016301,GO:0016310,GO:0016740,GO:0016772,GO:0016774,GO:0019202,GO:0019752,GO:0043436,GO:0043648,GO:0044237,GO:0044238,GO:0044249,GO:0044281,GO:0044283,GO:0044424,GO:0044464,GO:0046394,GO:0046451,GO:0071704,GO:1901564,GO:1901566,GO:1901576,GO:1901605,GO:1901607 2.7.2.4 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000001249 314.0
DYD2_k127_2730162_6 Catalyzes the transfer of the enolpyruvyl moiety of phosphoenolpyruvate (PEP) to the 5-hydroxyl of shikimate-3- phosphate (S3P) to produce enolpyruvyl shikimate-3-phosphate and inorganic phosphate K00800 - 2.5.1.19 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000003179 306.0
DYD2_k127_2730162_7 Catalyzes the oxidative deamination and cyclization of 2-amino-3,7-dideoxy-D-threo-hept-6-ulosonic acid (ADH) to yield 3- dehydroquinate (DHQ), which is fed into the canonical shikimic pathway of aromatic amino acid biosynthesis K11646 - 1.4.1.24 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000005186 286.0
DYD2_k127_2730162_8 Catalyzes a transaldol reaction between 6-deoxy-5- ketofructose 1-phosphate (DKFP) and L-aspartate semialdehyde (ASA) with an elimination of hydroxypyruvaldehyde phosphate to yield 2- amino-3,7-dideoxy-D-threo-hept-6-ulosonate (ADH). Plays a key role in an alternative pathway of the biosynthesis of 3-dehydroquinate (DHQ), which is involved in the canonical pathway for the biosynthesis of aromatic amino acids K11645,K16306 - 2.2.1.10,4.1.2.13 0.00000000000000000000000000000000000000000000000000000000000000000000000001796 260.0
DYD2_k127_2730162_9 Prephenate dehydrogenase chorismate mutase K00210 - 1.3.1.12 0.00000000000000000000000000000000000000000000000000000000000000000004275 246.0
DYD2_k127_2738028_0 Phosphopantothenate/pantothenate synthetase K09722 - 6.3.2.36 0.00000000000000000000000000000000000000000000000000000000000000002337 235.0
DYD2_k127_2743209_0 COG3209 Rhs family protein - - - 0.0000000000005025 78.0
DYD2_k127_2743209_1 amino acid activation for nonribosomal peptide biosynthetic process - - - 0.0000000000008181 82.0
DYD2_k127_2743209_2 Protein of unknown function (DUF2721) - - - 0.000007993 53.0
DYD2_k127_274855_0 ABC transporter K01990,K09695 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001914 416.0
DYD2_k127_274855_1 transport, permease protein K01992,K18233 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009845 358.0
DYD2_k127_274855_2 PFAM BNR Asp-box repeat - - - 0.000000000000000000000802 106.0
DYD2_k127_274855_3 COG1846 Transcriptional regulators - - - 0.000000000000000007216 86.0
DYD2_k127_274855_4 domain protein K14475 - - 0.0001515 53.0
DYD2_k127_2753566_0 Belongs to the glyceraldehyde-3-phosphate dehydrogenase family K00134 GO:0000166,GO:0003674,GO:0003824,GO:0004365,GO:0005488,GO:0005975,GO:0005996,GO:0006006,GO:0006094,GO:0008150,GO:0008152,GO:0009058,GO:0016051,GO:0016491,GO:0016620,GO:0016903,GO:0019318,GO:0019319,GO:0036094,GO:0043891,GO:0044238,GO:0044281,GO:0044283,GO:0046364,GO:0048037,GO:0050661,GO:0050662,GO:0051287,GO:0055114,GO:0071704,GO:0097159,GO:1901265,GO:1901363,GO:1901576 1.2.1.12 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006822 400.0
DYD2_k127_2753566_1 Catalyzes the conversion of GTP to 2,5-diamino-6- ribosylamino-4(3H)-pyrimidinone 5'-phosphate (DARP), formate and pyrophosphate K01497 - 3.5.4.25 0.0000000000000000000000000000000000000000000000000000000000000000000001122 249.0
DYD2_k127_2753566_2 PFAM Glyoxalase bleomycin resistance protein dioxygenase K07104 - 1.13.11.2 0.00000000000000000000000000000000000000000000000000000009997 199.0
DYD2_k127_2753566_3 lactoylglutathione lyase activity K01759 - 4.4.1.5 0.000000000000000000000000000000000000000005867 158.0
DYD2_k127_2753566_4 Catalyzes the anaerobic formation of alpha-ketobutyrate and ammonia from threonine in a two-step reaction. The first step involved a dehydration of threonine and a production of enamine intermediates (aminocrotonate), which tautomerizes to its imine form (iminobutyrate). Both intermediates are unstable and short- lived. The second step is the nonenzymatic hydrolysis of the enamine imine intermediates to form 2-ketobutyrate and free ammonia. In the low water environment of the cell, the second step is accelerated by RidA K01754 - 4.3.1.19 0.000002042 52.0
DYD2_k127_2753566_5 Histidine kinase - - - 0.0007881 51.0
DYD2_k127_2760712_0 Fungalysin metallopeptidase (M36) - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005408 436.0
DYD2_k127_2760712_1 Belongs to the peptidase S8 family K13277 GO:0005575,GO:0005576 - 0.00000000000000000000000000000000000000000000000000006698 201.0
DYD2_k127_2760712_2 PFAM ATP-binding region, ATPase domain protein - - - 0.0000000000000000000000000000191 139.0
DYD2_k127_2760712_3 Protein of unknown function (DUF4242) - - - 0.000000000000000001014 94.0
DYD2_k127_2771292_0 Nitrilase cyanide hydratase and apolipoprotein N-acyltransferase K12251 - 3.5.1.53 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008618 409.0
DYD2_k127_2771292_1 Required for the formation of a threonylcarbamoyl group on adenosine at position 37 (t(6)A37) in tRNAs that read codons beginning with adenine. Is a component of the KEOPS complex that is probably involved in the transfer of the threonylcarbamoyl moiety of threonylcarbamoyl-AMP (TC-AMP) to the N6 group of A37. Kae1 likely plays a direct catalytic role in this reaction, but requires other protein(s) of the complex to fulfill this activity K01409 GO:0000049,GO:0000408,GO:0002949,GO:0003674,GO:0003676,GO:0003723,GO:0003727,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0006139,GO:0006396,GO:0006399,GO:0006400,GO:0006725,GO:0006807,GO:0008033,GO:0008150,GO:0008152,GO:0009451,GO:0009987,GO:0010467,GO:0016070,GO:0032991,GO:0034470,GO:0034641,GO:0034660,GO:0043170,GO:0043412,GO:0044237,GO:0044238,GO:0044424,GO:0044464,GO:0046483,GO:0070525,GO:0071704,GO:0090304,GO:0097159,GO:1901360,GO:1901363 2.3.1.234 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001708 389.0
DYD2_k127_2771292_10 Calcineurin-like phosphoesterase superfamily domain - - - 0.0000000000000000000000006964 115.0
DYD2_k127_2771292_11 ubiE/COQ5 methyltransferase family - - - 0.000000000000000000000001886 113.0
DYD2_k127_2771292_12 DHHA1 domain K07463 - - 0.0000000000000000001837 101.0
DYD2_k127_2771292_13 helix_turn_helix, Arsenical Resistance Operon Repressor - - - 0.000000000866 72.0
DYD2_k127_2771292_14 Catalyzes the attachment of serine to tRNA(Ser). Is also able to aminoacylate tRNA(Sec) with serine, to form the misacylated tRNA L-seryl-tRNA(Sec), which will be further converted into selenocysteinyl-tRNA(Sec) K01875 - 6.1.1.11 0.000000005697 61.0
DYD2_k127_2771292_15 Toxic component of a toxin-antitoxin (TA) module. An RNase K07062 - - 0.00000003292 60.0
DYD2_k127_2771292_16 membrane K08976 - - 0.000002623 55.0
DYD2_k127_2771292_17 - - - - 0.000009042 55.0
DYD2_k127_2771292_18 TonB dependent receptor - - - 0.0000364 55.0
DYD2_k127_2771292_19 - - - - 0.00005272 48.0
DYD2_k127_2771292_2 Belongs to the agmatine deiminase family K10536 - 3.5.3.12 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002094 358.0
DYD2_k127_2771292_3 Catalyzes the attachment of tyrosine to tRNA(Tyr) in a two-step reaction tyrosine is first activated by ATP to form Tyr- AMP and then transferred to the acceptor end of tRNA(Tyr) K01866 GO:0003674,GO:0003824,GO:0004812,GO:0004831,GO:0004832,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006082,GO:0006139,GO:0006399,GO:0006412,GO:0006418,GO:0006438,GO:0006518,GO:0006520,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0016070,GO:0016874,GO:0016875,GO:0019538,GO:0019752,GO:0034641,GO:0034645,GO:0034660,GO:0043038,GO:0043039,GO:0043043,GO:0043170,GO:0043436,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044281,GO:0044424,GO:0044464,GO:0046483,GO:0071704,GO:0090304,GO:0140098,GO:0140101,GO:1901360,GO:1901564,GO:1901566,GO:1901576 6.1.1.1 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001885 353.0
DYD2_k127_2771292_4 Alpha/beta hydrolase family K01563 - 3.8.1.5 0.000000000000000000000000000000000000000000000000001868 195.0
DYD2_k127_2771292_5 Pyrophosphatase that catalyzes the hydrolysis of nucleoside triphosphates to their monophosphate derivatives, with a high preference for the non-canonical purine nucleotides XTP (xanthosine triphosphate), dITP (deoxyinosine triphosphate) and ITP. Seems to function as a house-cleaning enzyme that removes non-canonical purine nucleotides from the nucleotide pool, thus preventing their incorporation into DNA RNA and avoiding chromosomal lesions K02428 GO:0003674,GO:0003824,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006139,GO:0006725,GO:0006753,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0009056,GO:0009058,GO:0009141,GO:0009143,GO:0009987,GO:0016462,GO:0016787,GO:0016817,GO:0016818,GO:0018130,GO:0019438,GO:0019439,GO:0019637,GO:0034404,GO:0034641,GO:0034654,GO:0034655,GO:0044237,GO:0044238,GO:0044248,GO:0044249,GO:0044270,GO:0044271,GO:0044281,GO:0044283,GO:0044424,GO:0044464,GO:0046434,GO:0046483,GO:0046700,GO:0047429,GO:0055086,GO:0071704,GO:1901292,GO:1901360,GO:1901361,GO:1901362,GO:1901575,GO:1901576 3.6.1.66 0.000000000000000000000000000000000000000000000000009158 196.0
DYD2_k127_2771292_6 ribosomal protein S15 K02956 GO:0003674,GO:0003676,GO:0003723,GO:0003735,GO:0005198,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0006412,GO:0006518,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0015935,GO:0019538,GO:0019843,GO:0022626,GO:0022627,GO:0032991,GO:0034641,GO:0034645,GO:0043043,GO:0043170,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:0070181,GO:0071704,GO:0097159,GO:1901363,GO:1901564,GO:1901566,GO:1901576,GO:1990904 - 0.00000000000000000000000000000000000000000002276 165.0
DYD2_k127_2771292_7 D-aminoacyl-tRNA deacylase with broad substrate specificity. By recycling D-aminoacyl-tRNA to D-amino acids and free tRNA molecules, this enzyme counteracts the toxicity associated with the formation of D-aminoacyl-tRNA entities in vivo K09716 - 3.1.1.96 0.0000000000000000000000000000000000000001393 161.0
DYD2_k127_2771292_8 Required for the formation of a threonylcarbamoyl group on adenosine at position 37 (t(6)A37) in tRNAs that read codons beginning with adenine. Is a component of the KEOPS complex that is probably involved in the transfer of the threonylcarbamoyl moiety of threonylcarbamoyl-AMP (TC-AMP) to the N6 group of A37. The Kae1 domain likely plays a direct catalytic role in this reaction. The Bud32 domain probably displays kinase activity that regulates Kae1 function K15904 - 2.3.1.234,2.7.11.1 0.0000000000000000000000000000000003848 152.0
DYD2_k127_2771292_9 Glutamine amidotransferase domain K01953 - 6.3.5.4 0.00000000000000000000000000001717 129.0
DYD2_k127_2782983_0 COG0471 Di- and tricarboxylate transporters K03319,K09477,K11106,K14445 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002338 423.0
DYD2_k127_2782983_1 PFAM aspartate ornithine carbamoyltransferase carbamoyl-P binding domain K00609 GO:0003674,GO:0003824,GO:0004070,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006139,GO:0006220,GO:0006221,GO:0006725,GO:0006753,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009117,GO:0009165,GO:0009218,GO:0009220,GO:0009259,GO:0009260,GO:0009987,GO:0016740,GO:0016741,GO:0016743,GO:0018130,GO:0019438,GO:0019637,GO:0019693,GO:0034641,GO:0034654,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0044424,GO:0044464,GO:0046390,GO:0046483,GO:0055086,GO:0071704,GO:0072527,GO:0072528,GO:0090407,GO:1901135,GO:1901137,GO:1901293,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576 2.1.3.2 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001931 374.0
DYD2_k127_2782983_10 - - - - 0.000001754 58.0
DYD2_k127_2782983_11 RDD family - - - 0.000005357 58.0
DYD2_k127_2782983_12 SdrD B-like domain - - - 0.000009077 56.0
DYD2_k127_2782983_2 PFAM Sodium hydrogen exchanger family - - - 0.0000000000000000000000000000000000000000000000000000000000000000008561 244.0
DYD2_k127_2782983_3 Kelch motif - - - 0.000000000000000000000000000000000000000000000000000000004311 211.0
DYD2_k127_2782983_4 Forms part of the ribosomal stalk which helps the ribosome interact with GTP-bound translation factors K02867 - - 0.00000000000000000000000000000000000000000000000000002034 192.0
DYD2_k127_2782983_5 Involved in allosteric regulation of aspartate carbamoyltransferase K00610 - - 0.000000000000000000000000000000000000000000002529 170.0
DYD2_k127_2782983_6 Transcription elongation factor Spt5 K02601 - - 0.000000000000000000000000000000000000000009905 161.0
DYD2_k127_2782983_7 Transcriptional regulator K10947 - - 0.00000000000000000000000000000004141 129.0
DYD2_k127_2782983_8 PFAM CAAX amino terminal protease family K07052 - - 0.000000002749 66.0
DYD2_k127_2782983_9 exo-alpha-(2->6)-sialidase activity - - - 0.00000003718 65.0
DYD2_k127_2814304_0 ATPase P-type (Transporting), HAD superfamily, subfamily IC K01537 - 3.6.3.8 6.104e-208 674.0
DYD2_k127_2814304_1 TIGRFAM acetyl coenzyme A synthetase (ADP forming), alpha domain K01905,K22224 - 6.2.1.13 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001312 604.0
DYD2_k127_2814304_2 Beta-Casp domain K07576 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002962 505.0
DYD2_k127_2814304_3 reductase K00059 GO:0000166,GO:0003674,GO:0003824,GO:0004312,GO:0004316,GO:0005488,GO:0006082,GO:0006629,GO:0006631,GO:0006633,GO:0008150,GO:0008152,GO:0008610,GO:0009058,GO:0009987,GO:0016053,GO:0016491,GO:0016614,GO:0016616,GO:0016740,GO:0016746,GO:0016747,GO:0019752,GO:0030497,GO:0032787,GO:0036094,GO:0043436,GO:0044237,GO:0044238,GO:0044249,GO:0044255,GO:0044281,GO:0044283,GO:0046394,GO:0048037,GO:0050661,GO:0050662,GO:0055114,GO:0071704,GO:0072330,GO:0097159,GO:1901265,GO:1901363,GO:1901576 1.1.1.100 0.00000000000000000000000000000000000000000000000000000000007823 219.0
DYD2_k127_2814304_4 - - - - 0.00000000000000000000000000000000000002435 150.0
DYD2_k127_2814304_5 PAC2 family K06869 - - 0.0000000000000000000000000179 117.0
DYD2_k127_2814304_6 - - - - 0.000000015 60.0
DYD2_k127_281724_0 Belongs to the class-I aminoacyl-tRNA synthetase family K01869 GO:0003674,GO:0003824,GO:0004812,GO:0004823,GO:0004832,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006082,GO:0006139,GO:0006399,GO:0006412,GO:0006418,GO:0006429,GO:0006438,GO:0006518,GO:0006520,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0016070,GO:0016874,GO:0016875,GO:0019538,GO:0019752,GO:0034641,GO:0034645,GO:0034660,GO:0043038,GO:0043039,GO:0043043,GO:0043170,GO:0043436,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044281,GO:0044424,GO:0044464,GO:0046483,GO:0071704,GO:0090304,GO:0140098,GO:0140101,GO:1901360,GO:1901564,GO:1901566,GO:1901576 6.1.1.4 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004034 406.0
DYD2_k127_281724_1 COG0537 Diadenosine tetraphosphate (Ap4A) hydrolase and other HIT family hydrolases K02503 - - 0.000000000000000000000000000000000000005151 150.0
DYD2_k127_281724_2 guanyl-nucleotide exchange factor activity - - - 0.0000001399 64.0
DYD2_k127_2828120_0 Catalyzes the removal of elemental sulfur and selenium atoms from L-cysteine, L-cystine, L-selenocysteine, and L- selenocystine to produce L-alanine - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001352 317.0
DYD2_k127_2828120_1 Catalyzes the hydrolysis of N-formyl-L-kynurenine to L- kynurenine, the second step in the kynurenine pathway of tryptophan degradation K07130 GO:0003674,GO:0003824,GO:0004061,GO:0005488,GO:0006082,GO:0006520,GO:0006568,GO:0006569,GO:0006576,GO:0006586,GO:0006725,GO:0006766,GO:0006767,GO:0006807,GO:0008150,GO:0008152,GO:0008270,GO:0009056,GO:0009063,GO:0009072,GO:0009074,GO:0009308,GO:0009310,GO:0009987,GO:0016054,GO:0016787,GO:0016810,GO:0016811,GO:0019439,GO:0019441,GO:0019752,GO:0032787,GO:0034641,GO:0042180,GO:0042402,GO:0042430,GO:0042436,GO:0042537,GO:0043167,GO:0043169,GO:0043420,GO:0043436,GO:0044106,GO:0044237,GO:0044238,GO:0044248,GO:0044270,GO:0044281,GO:0044282,GO:0046218,GO:0046395,GO:0046483,GO:0046700,GO:0046872,GO:0046914,GO:0070189,GO:0071704,GO:1901360,GO:1901361,GO:1901564,GO:1901565,GO:1901575,GO:1901605,GO:1901606 3.5.1.9 0.00000000000000000000000000000000000000004018 160.0
DYD2_k127_2828120_2 Methyltransferase domain - - - 0.0000000000000000000000000000000000000004568 156.0
DYD2_k127_2828120_3 Thioesterase-like superfamily - - - 0.0000000000000000000000000000000000001567 149.0
DYD2_k127_2828120_4 LexA-binding, inner membrane-associated putative hydrolase K07038 - - 0.00000000000000612 87.0
DYD2_k127_2828120_5 TonB dependent receptor - - - 0.00000004525 64.0
DYD2_k127_2896058_0 Histidine kinase - - - 0.000000000000000000000000000000000000000000000000000000000455 220.0
DYD2_k127_2896058_1 X-Pro dipeptidyl-peptidase C-terminal non-catalytic domain - - - 0.0000000000000000000000000000000000000000000000265 192.0
DYD2_k127_2896058_2 Is involved in NO detoxification in an aerobic process, termed nitric oxide dioxygenase (NOD) reaction that utilizes O(2) and NAD(P)H to convert NO to nitrate, which protects the bacterium from various noxious nitrogen compounds. Therefore, plays a central role in the inducible response to nitrosative stress - - - 0.000000000000000000000000000000000000000000002602 176.0
DYD2_k127_2896058_3 helix_turn_helix, Arsenical Resistance Operon Repressor - - - 0.00000000000000000000000000005717 124.0
DYD2_k127_2896058_4 BNR repeat-like domain - - - 0.0000000000000000000000000009368 128.0
DYD2_k127_2896058_5 bacterial-type flagellum-dependent cell motility - - - 0.00000000000000000000000003178 124.0
DYD2_k127_2896058_6 Activator of Hsp90 ATPase homolog 1-like protein - - - 0.00000000000000000000002074 103.0
DYD2_k127_2896058_7 Winged helix-turn-helix - - - 0.000006614 56.0
DYD2_k127_2896058_8 Carboxypeptidase regulatory-like domain - - - 0.00008502 54.0
DYD2_k127_2896410_0 - - - - 0.00000000000000000003474 104.0
DYD2_k127_2925762_0 histidine kinase, dimerisation and phosphoacceptor region - - - 0.000167 53.0
DYD2_k127_2925762_1 Kelch repeat protein. Source PGD - - - 0.0004529 53.0
DYD2_k127_2933865_0 Protein of unknown function (DUF3494) - - - 0.000000000000000000000000000000000000000000000000000000002556 210.0
DYD2_k127_2933865_1 Histidine kinase - - - 0.00000000000000000000000000000000000000000000007859 190.0
DYD2_k127_2933865_10 Bacterio-opsin activator HTH domain protein - - - 0.0002752 52.0
DYD2_k127_2933865_2 Glycosyltransferase like family 2 - - - 0.00000000000000000000000000000216 131.0
DYD2_k127_2933865_3 PFAM response regulator receiver - - - 0.00000000000000001323 90.0
DYD2_k127_2933865_4 Two component, sigma54 specific, transcriptional regulator, Fis family K07715 - - 0.0000000000002419 78.0
DYD2_k127_2933865_5 Histidine kinase - - - 0.0000000007721 68.0
DYD2_k127_2933865_6 COG1520 FOG WD40-like repeat - - - 0.00000009706 64.0
DYD2_k127_2933865_7 Protein of unknown function (DUF2934) - - - 0.0000007924 55.0
DYD2_k127_2933865_8 - - - - 0.000001839 60.0
DYD2_k127_2933865_9 - - - - 0.000003464 56.0
DYD2_k127_2934664_0 Catalyzes the hydrolysis of glutamine to glutamate and ammonia as part of the biosynthesis of pyridoxal 5'-phosphate. The resulting ammonia molecule is channeled to the active site of PdxS K08681 - 4.3.3.6 0.000000000000000000000000000000000000000000000000004655 188.0
DYD2_k127_2934664_1 Contains 3'-5'exonuclease domain K02342 GO:0005575,GO:0005618,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005886,GO:0006950,GO:0006974,GO:0008150,GO:0009380,GO:0009987,GO:0016020,GO:0030312,GO:0032991,GO:0033554,GO:0044424,GO:0044444,GO:0044464,GO:0050896,GO:0051716,GO:0071944,GO:1902494,GO:1905347,GO:1905348,GO:1990391 2.7.7.7 0.000000000000000000004871 99.0
DYD2_k127_2951147_0 Malic enzyme, NAD binding domain K00027,K00029,K00625,K13788 GO:0003674,GO:0003824,GO:0004470,GO:0004473,GO:0005488,GO:0008150,GO:0008152,GO:0016491,GO:0016614,GO:0016615,GO:0016616,GO:0030145,GO:0043167,GO:0043169,GO:0046872,GO:0046914,GO:0055114 1.1.1.38,1.1.1.40,2.3.1.8 5.732e-301 942.0
DYD2_k127_2951147_1 DNA-dependent ATPase and 3'-5' DNA helicase that may be involved in repair of stalled replication forks K03726 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003165 608.0
DYD2_k127_2951147_10 - - - - 0.0000000000000000000004301 106.0
DYD2_k127_2951147_12 pterin-4-alpha-carbinolamine dehydratase K01724 - 4.2.1.96 0.00000000000000007545 85.0
DYD2_k127_2951147_13 KEOPS complex Cgi121-like subunit K09119 - - 0.0000007628 57.0
DYD2_k127_2951147_14 TonB-dependent receptor K02014 - - 0.0005551 51.0
DYD2_k127_2951147_2 acyl-CoA dehydrogenase K18244 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001418 428.0
DYD2_k127_2951147_3 AAA-like domain K06915 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006235 417.0
DYD2_k127_2951147_4 S-adenosyl-L-methionine-dependent methyltransferase that catalyzes the trimethylation of the amino group of the modified target histidine residue in translation elongation factor 2 (EF- 2), to form an intermediate called diphthine. The three successive methylation reactions represent the second step of diphthamide biosynthesis K20215 GO:0003674,GO:0003824,GO:0004164,GO:0006417,GO:0006448,GO:0006464,GO:0006732,GO:0006790,GO:0006807,GO:0008150,GO:0008152,GO:0008168,GO:0008757,GO:0009056,GO:0009058,GO:0009109,GO:0009889,GO:0009987,GO:0010468,GO:0010556,GO:0010608,GO:0016740,GO:0016741,GO:0017144,GO:0017182,GO:0017183,GO:0018193,GO:0018202,GO:0019222,GO:0019538,GO:0031323,GO:0031326,GO:0032259,GO:0032268,GO:0034248,GO:0036211,GO:0042737,GO:0043170,GO:0043412,GO:0044237,GO:0044238,GO:0044248,GO:0044249,GO:0044260,GO:0044267,GO:0044273,GO:0046500,GO:0050789,GO:0050794,GO:0050843,GO:0051171,GO:0051186,GO:0051187,GO:0051246,GO:0060255,GO:0065007,GO:0071704,GO:0080090,GO:1900247,GO:1901564,GO:1901575,GO:2000112,GO:2000765 2.1.1.98 0.000000000000000000000000000000000000000000000000000000000000000002631 235.0
DYD2_k127_2951147_5 Met-10+ like-protein K15429 GO:0001510,GO:0003674,GO:0003824,GO:0006139,GO:0006396,GO:0006399,GO:0006400,GO:0006725,GO:0006807,GO:0008033,GO:0008150,GO:0008152,GO:0008168,GO:0008173,GO:0008175,GO:0008757,GO:0009019,GO:0009451,GO:0009987,GO:0010467,GO:0016070,GO:0016423,GO:0016740,GO:0016741,GO:0030488,GO:0032259,GO:0034470,GO:0034641,GO:0034660,GO:0043170,GO:0043412,GO:0043414,GO:0044237,GO:0044238,GO:0044260,GO:0046483,GO:0071704,GO:0090304,GO:0140098,GO:0140101,GO:1901360 2.1.1.228 0.0000000000000000000000000000000000000000000000000000000000001052 226.0
DYD2_k127_2951147_6 PFAM LemA - - - 0.000000000000000000000000000000000000000000001913 172.0
DYD2_k127_2951147_7 Short-chain dehydrogenase reductase SDR K00059 GO:0000166,GO:0003674,GO:0003824,GO:0004312,GO:0004316,GO:0005488,GO:0006082,GO:0006629,GO:0006631,GO:0006633,GO:0008150,GO:0008152,GO:0008610,GO:0009058,GO:0009987,GO:0016053,GO:0016491,GO:0016614,GO:0016616,GO:0016740,GO:0016746,GO:0016747,GO:0019752,GO:0030497,GO:0032787,GO:0036094,GO:0043436,GO:0044237,GO:0044238,GO:0044249,GO:0044255,GO:0044281,GO:0044283,GO:0046394,GO:0048037,GO:0050661,GO:0050662,GO:0055114,GO:0071704,GO:0072330,GO:0097159,GO:1901265,GO:1901363,GO:1901576 1.1.1.100 0.000000000000000000000000000000000728 142.0
DYD2_k127_2951147_8 Protein of unknown function (DUF357) K09728 - - 0.0000000000000000000000000005915 117.0
DYD2_k127_2951147_9 Peptidase M14, carboxypeptidase A - - - 0.0000000000000000000001106 112.0
DYD2_k127_2951156_0 Aldolase/RraA K13831 - 4.1.2.43,5.3.1.27 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001533 514.0
DYD2_k127_2951156_1 Thiolase, N-terminal domain K00626 - 2.3.1.9 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004539 492.0
DYD2_k127_2951156_10 Belongs to the monovalent cation proton antiporter 2 (CPA2) transporter (TC 2.A.37) family K03455 - - 0.000000000001698 80.0
DYD2_k127_2951156_11 ACT domain - - - 0.00006006 55.0
DYD2_k127_2951156_2 acyl-CoA dehydrogenase K00248 - 1.3.8.1 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002104 400.0
DYD2_k127_2951156_3 Dehydrogenase K00074 - 1.1.1.157 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008609 365.0
DYD2_k127_2951156_4 Transketolase K00615 - 2.2.1.1 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009434 347.0
DYD2_k127_2951156_5 PFAM Transketolase K00615 - 2.2.1.1 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009675 328.0
DYD2_k127_2951156_6 C-5 cytosine-specific DNA methylase K00558 - 2.1.1.37 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004778 318.0
DYD2_k127_2951156_7 Transaldolase is important for the balance of metabolites in the pentose-phosphate pathway K00616 - 2.2.1.2 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000007156 290.0
DYD2_k127_2951156_8 nucleic acid binding protein containing the AN1-type Zn-finger K07059 - - 0.000000000000000000000000000000008874 136.0
DYD2_k127_2951156_9 - - - - 0.000000000000000000003704 104.0
DYD2_k127_2955099_0 Glycosyltransferase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000007873 295.0
DYD2_k127_2955099_1 catalyzes the demethylation of specific methylglutamate residues introduced into the chemoreceptors (methyl-accepting chemotaxis proteins) by CheR K13924 - 2.1.1.80,3.1.1.61 0.000000000000000000000000000000000000000000000000000000000000000000000000000006556 290.0
DYD2_k127_2955099_2 Mechanosensitive ion channel K03442 - - 0.000000000000000000000000000000000000000000004685 179.0
DYD2_k127_2955099_3 PIN domain - - - 0.0000000001063 68.0
DYD2_k127_2955099_4 - - - - 0.00007258 52.0
DYD2_k127_2974278_0 ATPase family associated with various cellular activities (AAA) K03924 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001804 378.0
DYD2_k127_2974278_1 protein (some members contain a von Willebrand factor type A (vWA) domain) - - - 0.0000000000000000000000000000000000000000003382 174.0
DYD2_k127_2974278_2 hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds K12251 - 3.5.1.53 0.000000000000000000000000000000000000001159 153.0
DYD2_k127_2974278_3 Tubulin/FtsZ family, GTPase domain K22222 - - 0.00000000000000000000000000000157 127.0
DYD2_k127_2974278_4 Transglutaminase-like superfamily - - - 0.000000000000000000001985 111.0
DYD2_k127_2974278_5 Carbon-nitrogen hydrolase - - - 0.00000000000001849 77.0
DYD2_k127_3013062_0 Removes N-terminal dipeptides sequentially from polypeptides having unsubstituted N-termini provided that the penultimate residue is proline K01281 - 3.4.14.11 0.000000000000000000000000000000000000000000000000000000000001452 235.0
DYD2_k127_3013062_1 helix_turn_helix, Arsenical Resistance Operon Repressor - - - 0.000000000001514 79.0
DYD2_k127_3044232_0 DEAD DEAH box helicase domain protein K05592,K11927 - 3.6.4.13 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008977 342.0
DYD2_k127_3044232_1 Fatty acid desaturase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001375 325.0
DYD2_k127_3044232_10 Psort location CytoplasmicMembrane, score - - - 0.0000000003742 70.0
DYD2_k127_3044232_11 Belongs to the SOS response-associated peptidase family - - - 0.0000003115 62.0
DYD2_k127_3044232_12 Carboxypeptidase regulatory-like domain - - - 0.00002377 56.0
DYD2_k127_3044232_13 protein conserved in archaea - - - 0.00004872 55.0
DYD2_k127_3044232_14 Protein of unknown function (DUF1761) - - - 0.0008796 48.0
DYD2_k127_3044232_2 endonuclease III K01247 - 3.2.2.21 0.000000000000000000000000000000000000000006131 162.0
DYD2_k127_3044232_3 glyoxalase bleomycin resistance protein dioxygenase - - - 0.0000000000000000000000000000000003577 139.0
DYD2_k127_3044232_4 Activator of Hsp90 ATPase homolog 1-like protein - - - 0.000000000000000000000000000006486 124.0
DYD2_k127_3044232_5 HD domain - - - 0.00000000000000000000005928 105.0
DYD2_k127_3044232_6 SOS response associated peptidase (SRAP) - - - 0.00000000000003874 81.0
DYD2_k127_3044232_7 transcriptional - - - 0.00000000000009655 78.0
DYD2_k127_3044232_8 Belongs to the SOS response-associated peptidase family - - - 0.00000000001228 74.0
DYD2_k127_3044232_9 - - - - 0.00000000001387 75.0
DYD2_k127_3055960_0 Belongs to the pirin family K06911 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003568 345.0
DYD2_k127_3055960_1 ABC transporter substrate binding protein - - - 0.000000000000000000000000000000000000000000000000000000000001832 226.0
DYD2_k127_3055960_2 Xaa-Pro dipeptidyl-peptidase K01281 - 3.4.14.11 0.0000000000000000000000000000000000000000000000000000000001874 227.0
DYD2_k127_3055960_3 Type I phosphodiesterase / nucleotide pyrophosphatase - - - 0.0000000000000000000000004328 120.0
DYD2_k127_3055960_4 PFAM Glycosyl transferase family 2 - - - 0.000000000000001298 89.0
DYD2_k127_3055960_5 - - - - 0.0000001062 55.0
DYD2_k127_3055960_6 Histidine kinase - - - 0.00003921 56.0
DYD2_k127_3055960_7 PFAM plasmid stabilization system K06218 - - 0.0001126 49.0
DYD2_k127_3079303_0 Belongs to the class-I aminoacyl-tRNA synthetase family K01887 - 6.1.1.19 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007294 482.0
DYD2_k127_3079303_1 ATPase, P-type (transporting), HAD superfamily, subfamily IC K17686 - 3.6.3.54 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001731 470.0
DYD2_k127_3079303_2 Catalyzes the sequential condensation of isopentenyl diphosphate (IPP) with geranylgeranyl diphosphate (GGPP) to yield (2Z,6Z,10Z,14Z,18Z,22Z,26Z,30E,34E,38E)-undecaprenyl diphosphate (tritrans,heptacis-UPP). It is probably the precursor of glycosyl carrier lipids K15888 GO:0002094,GO:0003674,GO:0003824,GO:0004659,GO:0006066,GO:0006629,GO:0006720,GO:0008150,GO:0008152,GO:0008299,GO:0008610,GO:0009058,GO:0009987,GO:0016093,GO:0016094,GO:0016740,GO:0016765,GO:0044237,GO:0044238,GO:0044249,GO:0044255,GO:0044281,GO:0044283,GO:0046165,GO:0071704,GO:1901576,GO:1901615,GO:1901617 2.5.1.89 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005155 328.0
DYD2_k127_3079303_3 PFAM FAD linked oxidase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000006928 289.0
DYD2_k127_3079303_4 DHH family - - - 0.00000000000000000000000000000000000000000000008095 183.0
DYD2_k127_3079303_5 metallopeptidase activity - - - 0.00000000000001473 84.0
DYD2_k127_3079303_6 Transcriptional regulator, ArsR family - - - 0.0000000000119 76.0
DYD2_k127_3079303_7 Domain of unknown function (DUF4332) - - - 0.000000002409 67.0
DYD2_k127_3080344_0 Proton pump that utilizes the energy of pyrophosphate hydrolysis as the driving force for proton movement across the membrane. Generates a proton motive force K15987 - 3.6.1.1 4.793e-245 776.0
DYD2_k127_3080344_1 phosphoglucomutase phosphomannomutase alpha beta alpha domain I K15778 - 5.4.2.2,5.4.2.8 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004434 444.0
DYD2_k127_3080344_10 Nucleotidyl transferase K00966 - 2.7.7.13 0.00000000000000000000000000000000000000000000000000000007116 207.0
DYD2_k127_3080344_11 Catalyzes the NADPH-dependent reduction of ketopantoate into pantoic acid K00077 - 1.1.1.169 0.0000000000000000000000000000000000000000000000000000008297 204.0
DYD2_k127_3080344_12 Catalyzes the ATP-dependent transfer of a sulfur to tRNA to produce 4-thiouridine in position 8 of tRNAs, which functions as a near-UV photosensor. Also catalyzes the transfer of sulfur to the sulfur carrier protein ThiS, forming ThiS-thiocarboxylate. This is a step in the synthesis of thiazole, in the thiamine biosynthesis pathway. The sulfur is donated as persulfide by IscS K03151 - 2.8.1.4 0.000000000000000000000000000000000000000000000000000008499 203.0
DYD2_k127_3080344_13 Acetyltransferase (GNAT) domain - - - 0.000000000000000000000000000000000000008586 160.0
DYD2_k127_3080344_14 TIGRFAM phage SPO1 DNA polymerase-related protein K21929 GO:0003674,GO:0003824,GO:0004844,GO:0005488,GO:0006139,GO:0006259,GO:0006281,GO:0006725,GO:0006807,GO:0006950,GO:0006974,GO:0008150,GO:0008152,GO:0009987,GO:0016787,GO:0016798,GO:0016799,GO:0019104,GO:0033554,GO:0034641,GO:0043170,GO:0044237,GO:0044238,GO:0044260,GO:0046483,GO:0048037,GO:0050896,GO:0051536,GO:0051539,GO:0051540,GO:0051716,GO:0071704,GO:0090304,GO:0097506,GO:0140097,GO:1901360 3.2.2.27 0.00000000000000000000000000000003447 135.0
DYD2_k127_3080344_15 Ankyrin repeat - - - 0.00000000000000000000000000007237 133.0
DYD2_k127_3080344_16 Belongs to the UPF0218 family K09735 - - 0.0000000000000000000000000004287 120.0
DYD2_k127_3080344_17 RNA-binding protein of the translin family K07477 - - 0.00000000000000000000004184 108.0
DYD2_k127_3080344_18 Peptidase family M28 - - - 0.0000000000000000000001087 111.0
DYD2_k127_3080344_19 PFAM NUDIX hydrolase - - - 0.000000000000000000007335 101.0
DYD2_k127_3080344_2 eIF-2 functions in the early steps of protein synthesis by forming a ternary complex with GTP and initiator tRNA K03237 GO:0003674,GO:0003676,GO:0003723,GO:0003743,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005840,GO:0006412,GO:0006413,GO:0006518,GO:0006807,GO:0008135,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0019538,GO:0032991,GO:0034641,GO:0034645,GO:0043021,GO:0043022,GO:0043043,GO:0043170,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044424,GO:0044444,GO:0044464,GO:0044877,GO:0071704,GO:0097159,GO:1901363,GO:1901564,GO:1901566,GO:1901576,GO:1990904 - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000004984 289.0
DYD2_k127_3080344_20 Belongs to the eukaryotic ribosomal protein eS31 family K02977 - - 0.00000000000000005504 82.0
DYD2_k127_3080344_21 Belongs to the UPF0216 family K09737 - - 0.0000000000000002156 85.0
DYD2_k127_3080344_22 DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates K03055 - 2.7.7.6 0.000000000000000589 84.0
DYD2_k127_3080344_23 Promotes the exchange of GDP for GTP in EF-1-alpha GDP, thus allowing the regeneration of EF-1-alpha GTP that could then be used to form the ternary complex EF-1-alpha GTP AAtRNA K03232 - - 0.00000000000000176 80.0
DYD2_k127_3080344_24 Belongs to the eukaryotic ribosomal protein eS24 family K02974 - - 0.0000000000000351 79.0
DYD2_k127_3080344_25 Bacterial regulatory helix-turn-helix protein, lysR family K03574 - 3.6.1.55 0.000000000002545 78.0
DYD2_k127_3080344_26 more specifically in 18S rRNA pseudouridylation and in cleavage of pre-rRNA K11130 - - 0.00000000007357 65.0
DYD2_k127_3080344_27 - - - - 0.0000000002557 69.0
DYD2_k127_3080344_28 Transcription elongation factor Spt4 K03050 - 2.7.7.6 0.000000006614 59.0
DYD2_k127_3080344_29 Domain of unknown function (DUF1610) K07580 - - 0.00000001159 64.0
DYD2_k127_3080344_3 amino acid K03294 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000008546 314.0
DYD2_k127_3080344_30 LVIVD repeat - - - 0.00000393 59.0
DYD2_k127_3080344_4 Belongs to the universal ribosomal protein uS2 family K02967 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000004716 273.0
DYD2_k127_3080344_5 EamA-like transporter family - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000002106 272.0
DYD2_k127_3080344_6 PAC2 family K07159 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000002455 262.0
DYD2_k127_3080344_7 EamA-like transporter family - - - 0.00000000000000000000000000000000000000000000000000000000000000005513 246.0
DYD2_k127_3080344_8 Belongs to the class IV-like SAM-binding methyltransferase superfamily. RNA methyltransferase TrmH family K03218 - 2.1.1.185 0.00000000000000000000000000000000000000000000000000000000002022 218.0
DYD2_k127_3080344_9 SHS2 domain found in N terminus of Rpb7p/Rpc25p/MJ0397 K03049 GO:0000428,GO:0005575,GO:0005622,GO:0005623,GO:0030880,GO:0032991,GO:0044424,GO:0044464,GO:0061695,GO:1902494,GO:1990234 2.7.7.6 0.00000000000000000000000000000000000000000000000000000001294 204.0
DYD2_k127_3101907_0 COG1599 Single-stranded DNA-binding replication protein A (RPA), large (70 kD) subunit and related ssDNA-binding proteins K07466 - - 0.00000000000000000000000000000000000000000000000000000000000000000000001046 260.0
DYD2_k127_3101907_1 DnaB-like helicase C terminal domain K08482 - - 0.00000000000000000000000000000000000000000000000000000000139 211.0
DYD2_k127_3101907_2 protein conserved in archaea K09746 - - 0.0000000000000000000000000000000000000000000000000003073 196.0
DYD2_k127_3101907_3 Histidine kinase - - - 0.000000000000000000000000000000000001969 145.0
DYD2_k127_3105433_0 Acyl-CoA dehydrogenase, C-terminal domain K06446 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005326 325.0
DYD2_k127_3105433_1 3-hydroxyacyl-CoA dehydrogenase K00074 - 1.1.1.157 0.00000000000000000000000000000000000000000000000000000000000000007532 239.0
DYD2_k127_3105433_2 Belongs to the enoyl-CoA hydratase isomerase family K01715 - 4.2.1.17 0.000000000000000000000000000000000000000000000000000000000000009695 227.0
DYD2_k127_3105433_3 NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be a menaquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient K00331 - 1.6.5.3 0.0000000000000000000000000000000000000000000000000000000000348 211.0
DYD2_k127_3105433_4 electron transfer flavoprotein, alpha subunit K03522 - - 0.000000000000000000000000000000000000000000002462 177.0
DYD2_k127_3105433_5 Respiratory-chain NADH dehydrogenase, 30 Kd subunit K00332 - 1.6.5.3 0.000000000000000000000000000000001325 139.0
DYD2_k127_3105433_6 electron transfer flavoprotein K03521 - - 0.000000000000000000000000001828 123.0
DYD2_k127_3105433_7 NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be a menaquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient K00333 GO:0003674,GO:0003824,GO:0003954,GO:0008137,GO:0008150,GO:0008152,GO:0016491,GO:0016651,GO:0016655,GO:0050136,GO:0055114 1.6.5.3 0.00000000000000000001468 94.0
DYD2_k127_3105433_8 NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be a menaquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient K00330 - 1.6.5.3 0.0000000000000000001091 93.0
DYD2_k127_3105433_9 exo-alpha-(2->6)-sialidase activity - - - 0.0001795 53.0
DYD2_k127_3121052_0 Serine protease with a broad substrate specificity K13276,K17734 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002116 332.0
DYD2_k127_3121052_1 protein conserved in bacteria - - - 0.0001866 50.0
DYD2_k127_3142243_0 Rad51 - - - 0.000000000000000000000000000000000000000000000000000000000000005173 227.0
DYD2_k127_3142243_1 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase - - - 0.000000000000000000004009 98.0
DYD2_k127_3142243_2 Pfam:KaiC - - - 0.00000008147 61.0
DYD2_k127_3142243_3 toxin activity - - - 0.00000008546 65.0
DYD2_k127_3142243_4 PKD domain containing protein - - - 0.00002198 57.0
DYD2_k127_3150621_0 arsR family - - - 0.000000000000000000001751 97.0
DYD2_k127_3150621_1 protein conserved in archaea - - - 0.0000000001778 72.0
DYD2_k127_3150621_2 Activator of Hsp90 ATPase homolog 1-like protein - - - 0.0000000002015 69.0
DYD2_k127_3193457_0 E1-E2 ATPase K17686 - 3.6.3.54 0.00000000000000000000000000000000000000000000000000000000000229 216.0
DYD2_k127_3193457_1 PFAM LemA K03744 - - 0.0000000000000000000000000000000000000000000000000000000001799 208.0
DYD2_k127_3193457_2 Peptidase family M48 K03799 - - 0.0000000000000000000000000000000000000000000000000000000003205 214.0
DYD2_k127_3193457_3 PAS fold - - - 0.000000000000000000000000000000000000003119 168.0
DYD2_k127_3193457_4 - - - - 0.00000000000000000000000000000000007975 143.0
DYD2_k127_3193457_5 Haloacid dehalogenase-like hydrolase K01838 - 5.4.2.6 0.00000000000000000000001632 109.0
DYD2_k127_3223093_0 phosphoesterase RecJ domain protein K07463 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000169 314.0
DYD2_k127_3223093_1 Type II/IV secretion system protein K07332 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000005785 286.0
DYD2_k127_3223093_2 RibD C-terminal domain K14654 GO:0000166,GO:0003674,GO:0003824,GO:0005488,GO:0005515,GO:0006139,GO:0006725,GO:0006766,GO:0006767,GO:0006771,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009110,GO:0009231,GO:0009451,GO:0009987,GO:0016070,GO:0016491,GO:0016614,GO:0016616,GO:0017144,GO:0018130,GO:0034641,GO:0036094,GO:0042364,GO:0042726,GO:0042727,GO:0043170,GO:0043412,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0044283,GO:0046483,GO:0046983,GO:0048037,GO:0050661,GO:0050662,GO:0051287,GO:0055114,GO:0071704,GO:0090304,GO:0097159,GO:1901265,GO:1901360,GO:1901362,GO:1901363,GO:1901564,GO:1901566,GO:1901576 1.1.1.302 0.0000000000000000000000000000000000002973 148.0
DYD2_k127_3223093_3 membrane transporter protein K07090 - - 0.000000000000000000000000002103 121.0
DYD2_k127_3223093_4 KaiC - - - 0.0000000000000000001349 97.0
DYD2_k127_3223093_5 - - - - 0.0000003669 62.0
DYD2_k127_3223093_6 - - - - 0.00001885 53.0
DYD2_k127_3235843_0 Isocitrate isopropylmalate dehydrogenase K00052 - 1.1.1.85 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003084 370.0
DYD2_k127_3235843_1 sequence-specific DNA binding - - - 0.0000000000000002788 89.0
DYD2_k127_3256882_0 PFAM RNA-metabolising metallo-beta-lactamase K12574 - - 0.0000000000000000000000000000009292 126.0
DYD2_k127_3256882_1 protein conserved in archaea - - - 0.000009606 57.0
DYD2_k127_3256882_2 TonB-dependent receptor K02014 - - 0.0002397 52.0
DYD2_k127_3258163_0 Phosphoribosylglycinamide synthetase, C domain K01945 - 6.3.4.13 0.0000000000000000000000000000000000000000000000000000000000000000003614 235.0
DYD2_k127_3258163_1 Conserved hypothetical ATP binding protein K06883 - - 0.000000000000000000000000000000000000000000000000000000000000000002269 236.0
DYD2_k127_3258163_2 K -dependent Na Ca exchanger family protein K07301 - - 0.00000000000000002132 91.0
DYD2_k127_3258163_3 guanyl-nucleotide exchange factor activity - - - 0.00000001941 65.0
DYD2_k127_3282019_0 Possesses two activities a DNA synthesis (polymerase) and an exonucleolytic activity that degrades single-stranded DNA in the 3' to 5' direction. Has a template-primer preference which is characteristic of a replicative DNA polymerase K02323 - 2.7.7.7 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001896 347.0
DYD2_k127_3282019_1 Involved in regulation of DNA replication K10725 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001338 316.0
DYD2_k127_3282019_2 prohibitin homologues - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000003329 295.0
DYD2_k127_3282019_3 Involved in DNA repair and in homologous recombination. May regulate the cleavage reactions of the branch-structured DNA. Has a very weak ATPase activity that is not stimulated by DNA. Binds DNA but does not promote DNA strands exchange K04484 - - 0.000000000000000000000000000000000000000000008133 176.0
DYD2_k127_3282019_4 Ion transport protein K10716 - - 0.000000000000000000000000000008086 129.0
DYD2_k127_3282019_5 - - - - 0.000000000000000000000000157 116.0
DYD2_k127_3282019_6 PFAM regulatory protein, ArsR - - - 0.000000000000000005276 95.0
DYD2_k127_3282019_7 COG0681 Signal peptidase I K13280 - 3.4.21.89 0.0000000000000007953 90.0
DYD2_k127_3282019_8 protein conserved in archaea - - - 0.000000000000006318 89.0
DYD2_k127_3282019_9 NfeD-like C-terminal, partner-binding - - - 0.0000000001625 70.0
DYD2_k127_3298625_0 X-Pro dipeptidyl-peptidase C-terminal non-catalytic domain - - - 0.00000000000000000000000000000000000000000000000002875 190.0
DYD2_k127_3298625_1 X-Pro dipeptidyl-peptidase C-terminal non-catalytic domain K06978 - - 0.00000000000284 74.0
DYD2_k127_3354318_0 TOPRIM - - - 0.00000000000000005728 85.0
DYD2_k127_3354318_1 Belongs to the UPF0235 family K09131 - - 0.00000000000003721 83.0
DYD2_k127_3358122_0 Produces ATP from ADP in the presence of a proton gradient across the membrane. The archaeal beta chain is a regulatory subunit K02118 - - 4.057e-236 739.0
DYD2_k127_3358122_1 Produces ATP from ADP in the presence of a proton gradient across the membrane. The archaeal alpha chain is a catalytic subunit K02117 - 3.6.3.14,3.6.3.15 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002032 578.0
DYD2_k127_3358122_2 Belongs to the V-ATPase 116 kDa subunit family K02123 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005058 369.0
DYD2_k127_3358122_3 Produces ATP from ADP in the presence of a proton gradient across the membrane. The archaeal alpha chain is a catalytic subunit K02117 - 3.6.3.14,3.6.3.15 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000001003 301.0
DYD2_k127_3358122_4 Produces ATP from ADP in the presence of a proton gradient across the membrane K02119 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000001222 264.0
DYD2_k127_3358122_5 Produces ATP from ADP in the presence of a proton gradient across the membrane K02120 - - 0.00000000000000000000000000000000000000000000000000000000353 204.0
DYD2_k127_3358122_6 X-Pro dipeptidyl-peptidase C-terminal non-catalytic domain K06978 - - 0.00000000000000000000000002234 120.0
DYD2_k127_3358122_7 Produces ATP from ADP in the presence of a proton gradient across the membrane K02122 - - 0.00000000000000000000000006704 109.0
DYD2_k127_3358122_8 ATP synthase subunit C K02124 - - 0.0000000000000000007956 101.0
DYD2_k127_3358122_9 Produces ATP from ADP in the presence of a proton gradient across the membrane K02121 - - 0.00000000005876 71.0
DYD2_k127_3370929_0 Psort location CytoplasmicMembrane, score - - - 0.0001139 54.0
DYD2_k127_3370929_1 nuclear chromosome segregation - - - 0.0009411 50.0
DYD2_k127_3409370_0 - - - - 0.00000000232 70.0
DYD2_k127_3409370_1 transmembrane protease serine 5 K09636 GO:0003674,GO:0003824,GO:0005575,GO:0005623,GO:0005886,GO:0006508,GO:0006807,GO:0008150,GO:0008152,GO:0008233,GO:0016020,GO:0016787,GO:0019538,GO:0036477,GO:0043025,GO:0043170,GO:0044238,GO:0044297,GO:0044464,GO:0071704,GO:0071944,GO:0097458,GO:0140096,GO:1901564 - 0.0001534 49.0
DYD2_k127_3413331_0 PFAM 3-hydroxyacyl-CoA dehydrogenase K00074,K15016 - 1.1.1.157,1.1.1.35,4.2.1.17 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001141 387.0
DYD2_k127_3413331_1 Dehydrogenase E1 component K00161,K00166 - 1.2.4.1,1.2.4.4 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004038 316.0
DYD2_k127_3413331_2 Mut7-C RNAse domain K09122 - - 0.000000000000000000000000000005988 125.0
DYD2_k127_3413331_3 Pathogenicity locus - - - 0.000000000000003414 79.0
DYD2_k127_3413331_4 - - - - 0.00000000000005052 83.0
DYD2_k127_3413331_5 Reeler domain - - - 0.000000006351 66.0
DYD2_k127_3413331_6 TonB dependent receptor - - - 0.0001918 54.0
DYD2_k127_3413996_0 Truncated hemoglobins K06886 - - 0.0000000000000000000000000000000000000000003132 161.0
DYD2_k127_3413996_1 Galactose oxidase, central domain - - - 0.0000000000000000000000000000000000000000003912 174.0
DYD2_k127_3413996_2 nucleic acid-binding protein, contains PIN domain - - - 0.0009359 48.0
DYD2_k127_3415501_0 Pkd domain containing protein - - - 0.00000000005625 75.0
DYD2_k127_3415501_1 Esterase PHB depolymerase - - - 0.0000001054 65.0
DYD2_k127_3417764_0 Catalyzes the attachment of glutamate to tRNA(Glu) in a two-step reaction glutamate is first activated by ATP to form Glu-AMP and then transferred to the acceptor end of tRNA(Glu) K01885 - 6.1.1.17 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001211 550.0
DYD2_k127_3417764_1 Glucose sorbosone - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000448 361.0
DYD2_k127_3417764_10 COG1361 S-layer domain - - - 0.000000000000007892 87.0
DYD2_k127_3417764_11 Regulatory protein MarR - - - 0.000000009629 63.0
DYD2_k127_3417764_12 Carboxypeptidase regulatory-like domain - - - 0.00006484 54.0
DYD2_k127_3417764_2 PFAM ABC transporter related K01990 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000004101 300.0
DYD2_k127_3417764_3 Major role in the synthesis of nucleoside triphosphates other than ATP. The ATP gamma phosphate is transferred to the NDP beta phosphate via a ping-pong mechanism, using a phosphorylated active-site intermediate K00940 - 2.7.4.6 0.000000000000000000000000000000000000000000000000001085 186.0
DYD2_k127_3417764_4 Multifunctional RNA-binding protein that recognizes the K-turn motif in ribosomal RNA, the RNA component of RNase P, box H ACA, box C D and box C' D' sRNAs K02936 GO:0000470,GO:0000966,GO:0001682,GO:0003674,GO:0003676,GO:0003723,GO:0003824,GO:0004518,GO:0004519,GO:0004521,GO:0004526,GO:0004540,GO:0004549,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0006139,GO:0006364,GO:0006396,GO:0006399,GO:0006412,GO:0006518,GO:0006725,GO:0006807,GO:0008033,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0015934,GO:0016070,GO:0016072,GO:0016787,GO:0016788,GO:0016891,GO:0016893,GO:0019538,GO:0022613,GO:0022625,GO:0022626,GO:0032991,GO:0034470,GO:0034471,GO:0034641,GO:0034645,GO:0034660,GO:0042254,GO:0042273,GO:0043043,GO:0043170,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043603,GO:0043604,GO:0044085,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:0046483,GO:0071704,GO:0071840,GO:0090304,GO:0090305,GO:0090501,GO:0090502,GO:0097159,GO:0099116,GO:0140098,GO:0140101,GO:1901360,GO:1901363,GO:1901564,GO:1901566,GO:1901576,GO:1990904 - 0.0000000000000000000000000000000000007308 142.0
DYD2_k127_3417764_5 dipeptidyl-peptidase K06978 - - 0.000000000000000000000000000000001836 148.0
DYD2_k127_3417764_6 Hydrolase CocE NonD family K06978 - - 0.00000000000000000000000000000003233 145.0
DYD2_k127_3417764_7 ABC-2 family transporter protein - - - 0.0000000000000000000000000000002516 136.0
DYD2_k127_3417764_8 Belongs to the eukaryotic ribosomal protein eS28 family K02979 GO:0000028,GO:0003674,GO:0003676,GO:0003723,GO:0003735,GO:0005198,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0006139,GO:0006364,GO:0006396,GO:0006725,GO:0006807,GO:0006996,GO:0008150,GO:0008152,GO:0009987,GO:0010467,GO:0015935,GO:0016043,GO:0016070,GO:0016072,GO:0022607,GO:0022613,GO:0022618,GO:0022626,GO:0022627,GO:0030490,GO:0032991,GO:0034470,GO:0034622,GO:0034641,GO:0034660,GO:0042254,GO:0042255,GO:0042274,GO:0043170,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043933,GO:0044085,GO:0044237,GO:0044238,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:0046483,GO:0065003,GO:0070925,GO:0071704,GO:0071826,GO:0071840,GO:0090304,GO:0097159,GO:1901360,GO:1901363,GO:1990904 - 0.0000000000000000000000000002189 115.0
DYD2_k127_3417764_9 Binds to the 23S rRNA K02896 - - 0.000000000000001318 79.0
DYD2_k127_3445620_0 Belongs to the enoyl-CoA hydratase isomerase family K01715 - 4.2.1.17 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002315 372.0
DYD2_k127_3445620_1 PFAM SNARE associated Golgi protein - - - 0.00000000000000000000000000000000000000000000000004799 183.0
DYD2_k127_3445620_2 Seems to be required for maximal rate of protein biosynthesis. Enhances ribosome dissociation into subunits and stabilizes the binding of the initiator Met-tRNA(I) to 40 S ribosomal subunits K03236 - - 0.00000000000000000000000000000000000009536 145.0
DYD2_k127_3445620_3 receptor K02014 - - 0.000004515 58.0
DYD2_k127_3445620_4 TonB-dependent receptor plug - - - 0.00001497 57.0
DYD2_k127_3445620_5 domain protein - - - 0.0005037 51.0
DYD2_k127_3463526_0 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain K00382 - 1.8.1.4 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007181 474.0
DYD2_k127_3463526_1 Belongs to the arginase family K01476 - 3.5.3.1 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000013 336.0
DYD2_k127_3463526_2 Phosphoribosylformylglycinamidine cyclo-ligase K01933 - 6.3.3.1 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001714 317.0
DYD2_k127_3463526_3 PFAM Uracil-DNA glycosylase superfamily K10800 - - 0.000000000000000001033 96.0
DYD2_k127_3463526_4 PadR family transcriptional regulator K10947 - - 0.000000000000004264 82.0
DYD2_k127_3463526_5 Low affinity iron permease - - - 0.0000000000001505 78.0
DYD2_k127_3463526_6 LVIVD repeat - - - 0.000000002133 70.0
DYD2_k127_3463526_7 Domain of unknown function (DUF4382) - - - 0.000946 51.0
DYD2_k127_3485618_0 One of the primary rRNA binding proteins, it binds directly near the 3'-end of the 23S rRNA, where it nucleates assembly of the 50S subunit K02906 GO:0000027,GO:0003674,GO:0003676,GO:0003723,GO:0003735,GO:0005198,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0006412,GO:0006518,GO:0006807,GO:0006996,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0015934,GO:0016043,GO:0019538,GO:0022607,GO:0022613,GO:0022618,GO:0022625,GO:0022626,GO:0032991,GO:0034622,GO:0034641,GO:0034645,GO:0042254,GO:0042255,GO:0042273,GO:0043043,GO:0043170,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043603,GO:0043604,GO:0043933,GO:0044085,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:0065003,GO:0070925,GO:0071704,GO:0071826,GO:0071840,GO:0097159,GO:1901363,GO:1901564,GO:1901566,GO:1901576,GO:1990904 - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002337 386.0
DYD2_k127_3485618_1 Binds the lower part of the 30S subunit head K02982 - - 0.0000000000000000000000000000000000000000000000000000000000000000000003565 249.0
DYD2_k127_3485618_10 PFAM PKD domain containing protein - - - 0.000000000004475 73.0
DYD2_k127_3485618_11 Part of ribonuclease P, a protein complex that generates mature tRNA molecules by cleaving their 5'-ends K03538 - 3.1.26.5 0.000001791 54.0
DYD2_k127_3485618_2 One of the primary rRNA binding proteins. Required for association of the 30S and 50S subunits to form the 70S ribosome, for tRNA binding and peptide bond formation. It has been suggested to have peptidyltransferase activity K02886 - - 0.00000000000000000000000000000000000000000000000000000000000000000009847 237.0
DYD2_k127_3485618_3 One of the primary rRNA binding proteins, this protein initially binds near the 5'-end of the 23S rRNA. It is important during the early stages of 50S assembly. It makes multiple contacts with different domains of the 23S rRNA in the assembled 50S subunit and ribosome K02930 GO:0002181,GO:0003674,GO:0003676,GO:0003723,GO:0003735,GO:0005198,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0006412,GO:0006518,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0015934,GO:0019538,GO:0022625,GO:0022626,GO:0032991,GO:0034641,GO:0034645,GO:0043043,GO:0043170,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:0071704,GO:0097159,GO:1901363,GO:1901564,GO:1901566,GO:1901576,GO:1990904 - 0.000000000000000000000000000000000000000000000000000000000005244 216.0
DYD2_k127_3485618_4 Protein S19 forms a complex with S13 that binds strongly to the 16S ribosomal RNA K02965 GO:0000028,GO:0003674,GO:0003735,GO:0005198,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0006996,GO:0008150,GO:0009987,GO:0015935,GO:0016043,GO:0022607,GO:0022613,GO:0022618,GO:0022626,GO:0022627,GO:0032991,GO:0034622,GO:0042254,GO:0042255,GO:0042274,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043933,GO:0044085,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:0065003,GO:0070925,GO:0071826,GO:0071840,GO:1990904 - 0.00000000000000000000000000000000000001026 149.0
DYD2_k127_3485618_5 Belongs to the SUI1 family K03113 - - 0.00000000000000000000000000000000000003245 146.0
DYD2_k127_3485618_6 The globular domain of the protein is located near the polypeptide exit tunnel on the outside of the subunit, while an extended beta-hairpin is found that lines the wall of the exit tunnel in the center of the 70S ribosome K02890 - - 0.000000000000000000000000000000001503 134.0
DYD2_k127_3485618_7 response regulator, receiver - - - 0.00000000000000000001057 97.0
DYD2_k127_3485618_8 Ribosomal L29 protein K02904 - - 0.00000000000002347 80.0
DYD2_k127_3485618_9 Binds to 23S rRNA. One of the proteins that surrounds the polypeptide exit tunnel on the outside of the ribosome K02892 - - 0.0000000000001462 78.0
DYD2_k127_3490405_0 Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family K00823,K03918 - 2.6.1.19,2.6.1.36 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001261 379.0
DYD2_k127_3494256_0 Belongs to the prokaryotic molybdopterin-containing oxidoreductase family - - - 6.4e-299 934.0
DYD2_k127_3494256_1 Belongs to the class-IV pyridoxal-phosphate-dependent aminotransferase family K00826 - 2.6.1.42 0.0000000000000000000000000000000000000000000000000000000000000000000000000000002549 275.0
DYD2_k127_3494256_10 HEPN domain K09132 - - 0.0001013 51.0
DYD2_k127_3494256_2 Required for formate dehydrogenase (FDH) activity. Acts as a sulfur carrier protein that transfers sulfur from IscS to the molybdenum cofactor prior to its insertion into FDH K02379 - - 0.00000000000000000000000000000000000000000000000000000000000000000000001913 250.0
DYD2_k127_3494256_3 Sodium hydrogen exchanger K11105 - - 0.000000000000000000000000000000001181 146.0
DYD2_k127_3494256_4 Sodium/hydrogen exchanger family K03455 - - 0.000000000000000000000000000002718 134.0
DYD2_k127_3494256_5 PFAM TrkA-C domain K07228 - - 0.00000000000000001401 89.0
DYD2_k127_3494256_6 Transfers a GMP moiety from GTP to Mo-molybdopterin (Mo- MPT) cofactor (Moco or molybdenum cofactor) to form Mo- molybdopterin guanine dinucleotide (Mo-MGD) cofactor K03752 - 2.7.7.77 0.00000000000008793 81.0
DYD2_k127_3494256_8 ParE toxin of type II toxin-antitoxin system, parDE K06218 - - 0.0000008636 54.0
DYD2_k127_3494256_9 - - - - 0.00005153 47.0
DYD2_k127_3539843_0 Involved in the TCA cycle. Catalyzes the stereospecific interconversion of fumarate to L-malate K01679 - 4.2.1.2 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001835 504.0
DYD2_k127_3539843_1 PFAM Transketolase K00615 - 2.2.1.1 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001514 323.0
DYD2_k127_3539843_2 Belongs to the pyruvate kinase family K00873 - 2.7.1.40 0.0000000000000000000000000000000000000000000000000000000000000000004028 237.0
DYD2_k127_3539843_3 Transketolase, pyrimidine binding domain - - - 0.00002129 53.0
DYD2_k127_3544256_0 SPTR Transposase, IS4 family protein - - - 0.0000000000000000000000000000000000000000000000000000000000000000001009 243.0
DYD2_k127_358109_0 Belongs to the MIP aquaporin (TC 1.A.8) family K02440,K06188,K09874 - - 0.00000000000000000000000000000000000000000000000000000000002063 214.0
DYD2_k127_358109_1 UbiA prenyltransferase family K04040 - 2.5.1.133,2.5.1.62 0.0000000000000000000000000000000000000004074 162.0
DYD2_k127_358109_2 PFAM blue (type 1) copper domain protein - - - 0.000000004597 68.0
DYD2_k127_358109_3 FR47-like protein K03789 - 2.3.1.128 0.000002829 55.0
DYD2_k127_358109_4 PFAM blue (type 1) copper domain protein K00368 - 1.7.2.1 0.000007136 58.0
DYD2_k127_3591662_0 PFAM Kelch - - - 0.000000000000000000000001766 119.0
DYD2_k127_3591662_1 LVIVD repeat - - - 0.0000000000000000000000323 114.0
DYD2_k127_3591662_2 LVIVD repeat - - - 0.0000000000000006047 91.0
DYD2_k127_3591662_3 LVIVD repeat - - - 0.00000009051 64.0
DYD2_k127_3591662_4 - - - - 0.0000001833 63.0
DYD2_k127_3591662_5 CarboxypepD_reg-like domain - - - 0.0009232 51.0
DYD2_k127_361662_0 Acetyl-CoA carboxylase, carboxyltransferase component (subunits alpha and beta) K19312 GO:0003674,GO:0003824,GO:0004658,GO:0016421,GO:0016874,GO:0016885 2.1.3.15,6.4.1.2,6.4.1.3 8.542e-223 702.0
DYD2_k127_361662_1 Permeases of the drug metabolite transporter (DMT) superfamily - - - 0.0000000000000000000000000001319 127.0
DYD2_k127_361662_2 PFAM TonB-dependent receptor plug - - - 0.0000501 55.0
DYD2_k127_3618277_0 Relaxes both positive and negative superturns and exhibits a strong decatenase activity K03167 GO:0003674,GO:0003735,GO:0005198,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0006412,GO:0006518,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0015935,GO:0019538,GO:0022613,GO:0032991,GO:0034641,GO:0034645,GO:0042254,GO:0043043,GO:0043170,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043603,GO:0043604,GO:0044085,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044446,GO:0044464,GO:0071704,GO:0071840,GO:1901564,GO:1901566,GO:1901576,GO:1990904 5.99.1.3 5.939e-201 647.0
DYD2_k127_3618277_1 Relaxes both positive and negative superturns and exhibits a strong decatenase activity K03166 GO:0003674,GO:0003676,GO:0003677,GO:0003824,GO:0003916,GO:0003918,GO:0004518,GO:0004519,GO:0004520,GO:0004536,GO:0005488,GO:0006139,GO:0006259,GO:0006725,GO:0006807,GO:0008094,GO:0008150,GO:0008152,GO:0009987,GO:0016462,GO:0016787,GO:0016788,GO:0016817,GO:0016818,GO:0016853,GO:0016887,GO:0016889,GO:0016894,GO:0017111,GO:0034641,GO:0042623,GO:0043170,GO:0044237,GO:0044238,GO:0044260,GO:0046483,GO:0061505,GO:0071704,GO:0090304,GO:0090305,GO:0097159,GO:0140097,GO:1901360,GO:1901363 5.99.1.3 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000007595 275.0
DYD2_k127_3618277_2 Relaxes both positive and negative superturns and exhibits a strong decatenase activity K03166 GO:0003674,GO:0003676,GO:0003677,GO:0003824,GO:0003916,GO:0003918,GO:0004518,GO:0004519,GO:0004520,GO:0004536,GO:0005488,GO:0006139,GO:0006259,GO:0006725,GO:0006807,GO:0008094,GO:0008150,GO:0008152,GO:0009987,GO:0016462,GO:0016787,GO:0016788,GO:0016817,GO:0016818,GO:0016853,GO:0016887,GO:0016889,GO:0016894,GO:0017111,GO:0034641,GO:0042623,GO:0043170,GO:0044237,GO:0044238,GO:0044260,GO:0046483,GO:0061505,GO:0071704,GO:0090304,GO:0090305,GO:0097159,GO:0140097,GO:1901360,GO:1901363 5.99.1.3 0.0000000000000000000000000000000000000000000000000000000000000000000005151 242.0
DYD2_k127_3631183_0 Essential subunit of the Sec protein translocation channel SecYEG. Clamps together the 2 halves of SecY. May contact the channel plug during translocation K07342 - - 0.00000002821 61.0
DYD2_k127_3631183_1 Periplasmic copper-binding K07218 - - 0.000164 54.0
DYD2_k127_3637068_0 DegT/DnrJ/EryC1/StrS aminotransferase family - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001335 472.0
DYD2_k127_3637068_1 ATPase family associated with various cellular activities (AAA) K03924 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002555 317.0
DYD2_k127_3637068_2 Protein of unknown function DUF58 - - - 0.00000000000000001398 96.0
DYD2_k127_3637068_3 PFAM TonB-dependent Receptor Plug - - - 0.000001926 59.0
DYD2_k127_3637068_4 Domain of unknown function (DUF4190) - - - 0.00008852 56.0
DYD2_k127_3637068_5 TonB-dependent receptor K02014 - - 0.0002084 52.0
DYD2_k127_3645883_0 Flavin containing amine oxidoreductase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000002149 303.0
DYD2_k127_3645883_1 X-Pro dipeptidyl-peptidase C-terminal non-catalytic domain - - - 0.00000000000000000000000000000000000847 156.0
DYD2_k127_3645883_2 Protein of unknown function (DUF429) - - - 0.000000000000001704 87.0
DYD2_k127_3662912_0 Key enzyme in the regulation of glycerol uptake and metabolism. Catalyzes the phosphorylation of glycerol to yield sn- glycerol 3-phosphate K00864 GO:0003674,GO:0003824,GO:0004370,GO:0005975,GO:0006066,GO:0006071,GO:0006793,GO:0006796,GO:0008150,GO:0008152,GO:0009987,GO:0016301,GO:0016310,GO:0016740,GO:0016772,GO:0016773,GO:0019400,GO:0019751,GO:0044237,GO:0044238,GO:0044262,GO:0044281,GO:0071704,GO:1901615 2.7.1.30 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003002 551.0
DYD2_k127_3662912_1 PFAM tRNA synthetase, class II (G, H, P and S) K01880 - 6.1.1.14 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001218 321.0
DYD2_k127_3662912_2 Arsenical pump membrane protein - - - 0.000000000000000000000000000000000000000000000000000000000000009328 231.0
DYD2_k127_3662912_3 Amidohydrolase family K01485,K01487 - 3.5.4.1,3.5.4.3 0.00000000000000000000000000000000000006643 155.0
DYD2_k127_3662912_4 CBS domain - - - 0.0000000000000000000000006325 113.0
DYD2_k127_3662912_5 COG0589 Universal stress protein UspA and related nucleotide-binding proteins - - - 0.00000000000000000000004045 106.0
DYD2_k127_3664453_0 PFAM phosphate transporter K03306 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004248 344.0
DYD2_k127_3664453_1 molybdopterin converting factor K03635,K21142 GO:0003674,GO:0003824,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006139,GO:0006163,GO:0006725,GO:0006732,GO:0006753,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009116,GO:0009117,GO:0009119,GO:0009141,GO:0009144,GO:0009150,GO:0009199,GO:0009205,GO:0009259,GO:0009987,GO:0016740,GO:0016782,GO:0016783,GO:0018130,GO:0019538,GO:0019637,GO:0019693,GO:0030366,GO:0032324,GO:0034641,GO:0042278,GO:0043170,GO:0043545,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044281,GO:0044424,GO:0044444,GO:0044464,GO:0046039,GO:0046128,GO:0046483,GO:0051186,GO:0051188,GO:0051189,GO:0055086,GO:0071704,GO:0072521,GO:0090407,GO:1901068,GO:1901135,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576,GO:1901657 2.8.1.12 0.00000000000000000000007741 101.0
DYD2_k127_3664453_2 Mo-molybdopterin cofactor metabolic process K03636,K03637,K03752,K21142 GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006732,GO:0006777,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009108,GO:0009987,GO:0018130,GO:0019538,GO:0019637,GO:0019720,GO:0043170,GO:0043545,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0051186,GO:0051188,GO:0051189,GO:0071704,GO:0090407,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576 2.7.7.77,2.8.1.12,4.6.1.17 0.00000000001197 68.0
DYD2_k127_3664453_3 Protein of unknown function (DUF1405) - - - 0.000000000125 71.0
DYD2_k127_3664453_4 Protein of unknown function (DUF983) - - - 0.000000003033 66.0
DYD2_k127_3664453_5 Phosphate transport regulator K07220 - - 0.00001077 47.0
DYD2_k127_3668185_0 transport - - - 0.0002283 53.0
DYD2_k127_3671888_0 glyoxalase III activity - - - 0.000000000000000000000000000000000000000000000000000005103 195.0
DYD2_k127_3671888_1 SnoaL-like domain - - - 0.000000000000000000000000000000006376 130.0
DYD2_k127_3671888_2 Protein of unknown function (DUF4242) - - - 0.00000000000000000000000000003039 121.0
DYD2_k127_3671888_4 X-Pro dipeptidyl-peptidase domain protein K06978 - - 0.000000000000000000000000706 121.0
DYD2_k127_3671888_5 SnoaL-like domain - - - 0.000000000000000000000007245 107.0
DYD2_k127_3671888_6 Histidine kinase - - - 0.000003145 59.0
DYD2_k127_3671888_7 AsnC family K03719 - - 0.00004921 55.0
DYD2_k127_3673622_0 domain protein K14475 - - 0.0002752 52.0
DYD2_k127_3674438_0 ATPase family associated with various cellular activities (AAA) K03924 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002485 398.0
DYD2_k127_3674438_1 protein (some members contain a von Willebrand factor type A (vWA) domain) - - - 0.00000000000892 73.0
DYD2_k127_3674438_2 Transglutaminase-like superfamily - - - 0.0000000006939 69.0
DYD2_k127_3689151_0 Catalyzes the conversion of AMP and phosphate to adenine and ribose 1,5-bisphosphate (R15P). Exhibits phosphorylase activity toward CMP and UMP in addition to AMP. Functions in an archaeal AMP degradation pathway, together with R15P isomerase and RubisCO K18931 - 2.4.2.57 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001303 511.0
DYD2_k127_3689151_1 Threonine dehydratase K01754 - 4.3.1.19 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001567 402.0
DYD2_k127_3689151_10 DNA alkylation repair enzyme - - - 0.000000000000000000000000000000000000000000000000000000000001855 222.0
DYD2_k127_3689151_11 Signal transduction histidine kinase - - - 0.0000000000000000000000000000000000000000000000000000000000234 220.0
DYD2_k127_3689151_12 alpha/beta hydrolase fold - - - 0.00000000000000000000000000000000000000000000000000000000003707 216.0
DYD2_k127_3689151_13 COG0491 Zn-dependent hydrolases, including glyoxylases K01069 - 3.1.2.6 0.000000000000000000000000000000000000000000000000000003655 197.0
DYD2_k127_3689151_14 AIR carboxylase K06898 - - 0.000000000000000000000000000000000000000000000000000005951 199.0
DYD2_k127_3689151_15 nitric oxide dioxygenase activity K21405 - - 0.00000000000000000000000000000000000000000001227 174.0
DYD2_k127_3689151_16 acr, cog1565 - - - 0.00000000000000000000000000000000000000000003913 174.0
DYD2_k127_3689151_17 regulator of amino acid metabolism, contains ACT domain K07103 - - 0.00000000000000000000000000000000000005881 148.0
DYD2_k127_3689151_18 Domain of unknown function (DUF4442) - - - 0.0000000000000000000000000000000000005639 148.0
DYD2_k127_3689151_19 Phosphatidylethanolamine-binding protein K06910 - - 0.00000000000000000000000000000003565 136.0
DYD2_k127_3689151_2 Catalyzes the addition of molecular CO(2) and H(2)O to ribulose 1,5-bisphosphate (RuBP), generating two molecules of 3- phosphoglycerate (3-PGA). Functions in an archaeal AMP degradation pathway, together with AMP phosphorylase and R15P isomerase K01601 - 4.1.1.39 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009195 392.0
DYD2_k127_3689151_20 DNA-binding transcription factor activity - - - 0.00000000000000000000000000000006676 132.0
DYD2_k127_3689151_21 Galactose oxidase, central domain - - - 0.000000000000000000000000000004661 132.0
DYD2_k127_3689151_22 archaeal coiled-coil protein - - - 0.0000000000000000000000157 111.0
DYD2_k127_3689151_23 Protein of unknown function (DUF3088) - - - 0.00000000000000000000006806 102.0
DYD2_k127_3689151_24 Iron dependent K03709 - - 0.00000000000000000000241 98.0
DYD2_k127_3689151_25 translation release factor activity K03265 - - 0.0000000000000002072 91.0
DYD2_k127_3689151_26 membrane-associated protein - - - 0.000000000000008174 86.0
DYD2_k127_3689151_27 ACT domain protein - - - 0.0000000000008787 74.0
DYD2_k127_3689151_28 Response regulator receiver - - - 0.00000002131 62.0
DYD2_k127_3689151_29 nucleotidyltransferase activity K07075,K10439 - - 0.0000001228 61.0
DYD2_k127_3689151_3 Belongs to the 5'-nucleotidase family K01081 - 3.1.3.5 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000391 354.0
DYD2_k127_3689151_30 - - - - 0.0000006713 56.0
DYD2_k127_3689151_31 Tonb-dependent siderophore receptor K02014 - - 0.000003906 59.0
DYD2_k127_3689151_33 HicB_like antitoxin of bacterial toxin-antitoxin system - - - 0.0001157 50.0
DYD2_k127_3689151_34 CAAX protease self-immunity K07052 - - 0.0003024 53.0
DYD2_k127_3689151_4 PFAM Aldehyde dehydrogenase family K00128,K00131,K00146,K00151,K10217 - 1.2.1.3,1.2.1.32,1.2.1.39,1.2.1.60,1.2.1.85,1.2.1.9 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002443 351.0
DYD2_k127_3689151_5 Could be responsible for synthesis of pseudouridine from uracil-55 in the psi GC loop of transfer RNAs K03177,K11131 - 5.4.99.25 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006838 338.0
DYD2_k127_3689151_6 Pyridoxamine 5'-phosphate oxidase K07006 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000006753 256.0
DYD2_k127_3689151_7 Has an important function as a repair enzyme for proteins that have been inactivated by oxidation. Catalyzes the reversible oxidation-reduction of methionine sulfoxide in proteins to methionine K07304 - 1.8.4.11 0.0000000000000000000000000000000000000000000000000000000000000000000000002062 251.0
DYD2_k127_3689151_8 Eukaryotic DNA topoisomerase I, catalytic core K03168 - 5.99.1.2 0.0000000000000000000000000000000000000000000000000000000000000000004397 243.0
DYD2_k127_3689151_9 Belongs to the eIF-2B alpha beta delta subunits family K18237 - 5.3.1.29 0.000000000000000000000000000000000000000000000000000000000000001701 232.0
DYD2_k127_3700726_0 Belongs to the short-chain dehydrogenases reductases (SDR) family - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000648 277.0
DYD2_k127_3700726_1 - - - - 0.0000000000000000000000000000000000000000000004324 189.0
DYD2_k127_3700726_10 Toxic component of a toxin-antitoxin (TA) module. An RNase - - - 0.0005807 50.0
DYD2_k127_3700726_2 Asparaginyl-tRNA synthetase K01893 GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0044424,GO:0044464 6.1.1.22 0.0000000000000000000000000000000005674 131.0
DYD2_k127_3700726_3 Carbon-nitrogen hydrolase - - - 0.000000000000000000000000000000007312 138.0
DYD2_k127_3700726_4 Thioesterase superfamily - - - 0.0000000000001536 76.0
DYD2_k127_3700726_5 protein phosphatase 2C domain protein - - - 0.0000000000002988 75.0
DYD2_k127_3700726_6 PIN domain - - - 0.000000000008733 70.0
DYD2_k127_3700726_7 Domain of unknown function (DUF4332) - - - 0.000000000133 72.0
DYD2_k127_3700726_8 Ectodermal ciliogenesis protein - - - 0.00000128 54.0
DYD2_k127_3700726_9 - - - - 0.000005019 51.0
DYD2_k127_3731600_0 Aldolase/RraA - - - 0.00000000000000000000000000000000000000000000000005205 186.0
DYD2_k127_3731600_1 helix_turn_helix multiple antibiotic resistance protein - - - 0.00000000000000000008609 94.0
DYD2_k127_3731600_2 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily - - - 0.0000000000000000001272 94.0
DYD2_k127_3731600_3 Protein of unknown function (DUF429) - - - 0.0000000000000000001822 91.0
DYD2_k127_3731600_4 transcriptional regulator PadR family K10947 - - 0.00000000000000001548 86.0
DYD2_k127_3731600_5 Domain of unknown function (DUF4383) - - - 0.000000000004123 74.0
DYD2_k127_3731600_6 His Kinase A (phosphoacceptor) domain - - - 0.000001435 54.0
DYD2_k127_3734174_0 COG0553 Superfamily II DNA RNA helicases, SNF2 family - - - 0.00000000000000000000000000000002196 134.0
DYD2_k127_3734174_1 Subtilase family K17734 - - 0.000000000000000000000001343 122.0
DYD2_k127_3743543_0 Glucose sorbosone - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006689 398.0
DYD2_k127_3743543_1 Catalyzes the cyclization of GTP to (8S)-3',8-cyclo-7,8- dihydroguanosine 5'-triphosphate K03639 - 4.1.99.22 0.000000000000000000000000000000000000000000000000000000000000001043 225.0
DYD2_k127_3762206_0 Belongs to the pyruvate kinase family K00873 - 2.7.1.40 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000009322 282.0
DYD2_k127_3762206_1 calcium, potassium:sodium antiporter activity K07301 - - 0.0000000000000000000000000000000000000000000000000000000000000004976 236.0
DYD2_k127_3762206_2 - - - - 0.000000000000000000000000000000000000000000001444 176.0
DYD2_k127_3762206_3 Thiopurine S-methyltransferase (TPMT) - - - 0.00000000000000000000000000000004209 133.0
DYD2_k127_3769484_0 Stabilizes TBP binding to an archaeal box-A promoter. Also responsible for recruiting RNA polymerase II to the pre- initiation complex (DNA-TBP-TFIIB) K03124 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004427 522.0
DYD2_k127_3769484_1 COG0382 4-hydroxybenzoate polyprenyltransferase and related prenyltransferases - - - 0.00000000000000000000000000000000000000000000000000000000000000000003247 244.0
DYD2_k127_3769484_10 nucleotidyl transferase K04042 - 2.3.1.157,2.7.7.23 0.0000002191 54.0
DYD2_k127_3769484_2 COG0451 Nucleoside-diphosphate-sugar epimerases K01784 - 5.1.3.2 0.000000000000000000000000000000000000000000000000000000000000000002369 239.0
DYD2_k127_3769484_3 Glycosyl transferase family 21 K07011 - - 0.000000000000000000000000000000000000000000000000000005528 202.0
DYD2_k127_3769484_4 - - - - 0.000000000000000000000000000000005416 145.0
DYD2_k127_3769484_5 nucleotidyltransferase activity K07075 - - 0.0000000000000000000000000000000296 128.0
DYD2_k127_3769484_6 Lysylphosphatidylglycerol synthase TM region - - - 0.00000000000000000000000000000463 134.0
DYD2_k127_3769484_7 PFAM Uncharacterised protein family UPF0150 - - - 0.0000000000002219 75.0
DYD2_k127_3769484_8 periplasmic or secreted lipoprotein K07339 - - 0.00000000003788 67.0
DYD2_k127_3769484_9 Protein of unknown function DUF86 - - - 0.00000000004043 68.0
DYD2_k127_3790429_0 pyridoxal phosphate-dependent enzyme apparently involved in regulation of cell wall biogenesis K13010 - 2.6.1.102 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004339 368.0
DYD2_k127_3790429_1 ABC transporter K06158 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000181 335.0
DYD2_k127_3790429_10 protein conserved in archaea - - - 0.0000001045 63.0
DYD2_k127_3790429_11 - - - - 0.00004446 56.0
DYD2_k127_3790429_12 - - - - 0.0008138 45.0
DYD2_k127_3790429_2 and related - - - 0.0000000000000000000000000000000000000000000000000000006528 207.0
DYD2_k127_3790429_3 Methyltransferase domain - - - 0.00000000000000000000000000000000000000001622 163.0
DYD2_k127_3790429_4 repeat protein - - - 0.000000000000000000000001389 112.0
DYD2_k127_3790429_5 Sodium/hydrogen exchanger family - - - 0.000000000000000000000005128 116.0
DYD2_k127_3790429_6 Catalyzes the hydrolysis of a monocarboxylic acid amid to form a monocarboxylate and ammonia - - - 0.00000000000000000004269 101.0
DYD2_k127_3790429_7 response regulator - - - 0.00000000000000001796 87.0
DYD2_k127_3790429_8 Glycosyl transferase 4-like - - - 0.0000000000000000345 95.0
DYD2_k127_3790429_9 Toxic component of a toxin-antitoxin (TA) module. An RNase K07065 - - 0.000000000000006255 80.0
DYD2_k127_3845741_0 Ribosomal protein S8e K02995 GO:0000462,GO:0003674,GO:0003735,GO:0005198,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0006139,GO:0006364,GO:0006396,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0009987,GO:0010467,GO:0015935,GO:0016070,GO:0016072,GO:0022613,GO:0022626,GO:0022627,GO:0030490,GO:0032991,GO:0034470,GO:0034641,GO:0034660,GO:0042254,GO:0042274,GO:0043170,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0044085,GO:0044237,GO:0044238,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:0046483,GO:0071704,GO:0071840,GO:0090304,GO:1901360,GO:1990904 - 0.00000000000000000000000000000000000002947 147.0
DYD2_k127_3845741_1 - - - - 0.00000000000000000000000000271 117.0
DYD2_k127_3845741_2 Involved in targeting and insertion of nascent membrane proteins into the cytoplasmic membrane. Binds directly to 7S RNA and mediates binding of the 54 kDa subunit of the SRP K03105 GO:0003674,GO:0003676,GO:0003723,GO:0005488,GO:0006605,GO:0006612,GO:0006613,GO:0006810,GO:0006886,GO:0008104,GO:0008150,GO:0008312,GO:0015031,GO:0015833,GO:0033036,GO:0034613,GO:0042886,GO:0045184,GO:0046907,GO:0051179,GO:0051234,GO:0051641,GO:0051649,GO:0070727,GO:0071702,GO:0071705,GO:0072657,GO:0090150,GO:0097159,GO:1901363 - 0.000000000000004533 79.0
DYD2_k127_3845741_4 - - - - 0.0000000001225 76.0
DYD2_k127_3845741_5 COG3291 FOG PKD repeat - - - 0.00008447 54.0
DYD2_k127_3855278_0 NAD-dependent epimerase dehydratase - - - 0.0000000000001428 77.0
DYD2_k127_3855278_1 COG2204 Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains K10943 - - 0.0000000008883 68.0
DYD2_k127_3855278_2 Domain of unknown function (DUF4332) - - - 0.0000006129 61.0
DYD2_k127_3855278_3 - - - - 0.00004645 55.0
DYD2_k127_3855278_4 RelA SpoT domain protein - - - 0.0001009 55.0
DYD2_k127_3855278_5 protein conserved in archaea - - - 0.000537 52.0
DYD2_k127_3870956_0 DoxX K16937 - 1.8.5.2 0.0000000000000000000000000000000000000000000000000000000000000000000000007578 250.0
DYD2_k127_3870956_1 PFAM Redoxin domain protein - - - 0.00000000000000000000000000000000000000000000000000003379 195.0
DYD2_k127_3870956_2 PFAM cytochrome c biogenesis protein, transmembrane region K06196 - - 0.000000000000000000000000000000000000000000006235 174.0
DYD2_k127_3870956_3 Transcriptional regulator, ArsR family - - - 0.000001573 57.0
DYD2_k127_3904828_0 Conserved hypothetical protein (DUF2461) - - - 0.0000000000000000000000000000000000000000000000000003624 190.0
DYD2_k127_3913365_0 Catalyzes the attachment of L-aspartate to tRNA(Asp) in a two-step reaction L-aspartate is first activated by ATP to form Asp-AMP and then transferred to the acceptor end of tRNA(Asp) K22503 - 6.1.1.12 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002829 446.0
DYD2_k127_3913365_1 Integral membrane protein TerC family - - - 0.000001546 54.0
DYD2_k127_3944084_0 Belongs to the phosphoglycerate kinase family K00927,K01803 - 2.7.2.3,5.3.1.1 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000058 472.0
DYD2_k127_3944084_1 Trypsin - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000002911 280.0
DYD2_k127_3944084_2 COG0110 Acetyltransferase (isoleucine patch superfamily) - - - 0.0000000000000000000000000000000000000000000000000000008375 196.0
DYD2_k127_3944084_3 Glycosyl hydrolase family 26 K01179 GO:0003674,GO:0003824,GO:0004553,GO:0008810,GO:0016787,GO:0016798 3.2.1.4 0.0000000000000000000000000000000000000000000000000000008482 214.0
DYD2_k127_3944084_4 Bacteriocin-protection, YdeI or OmpD-Associated - - - 0.00000000000000000000000000000001352 130.0
DYD2_k127_3944084_5 and related - - - 0.000000000000005392 77.0
DYD2_k127_3944084_6 CDP-alcohol phosphatidyltransferase K07281,K07291 - 2.7.7.74,2.7.8.34 0.0000000001175 72.0
DYD2_k127_3944084_7 Glycosyltransferase like family 2 - - - 0.00000007831 63.0
DYD2_k127_3944084_8 helix_turn_helix, Arsenical Resistance Operon Repressor - - - 0.0000005537 60.0
DYD2_k127_3963907_0 Is involved in the reduction of 2,3- digeranylgeranylglycerophospholipids (unsaturated archaeols) into 2,3-diphytanylglycerophospholipids (saturated archaeols) in the biosynthesis of archaeal membrane lipids. Catalyzes the formation of archaetidic acid (2,3-di-O-phytanyl-sn-glyceryl phosphate) from 2,3-di-O-geranylgeranylglyceryl phosphate (DGGGP) via the hydrogenation of each double bond of the isoprenoid chains K00311,K17830 - 1.3.1.101,1.3.7.11,1.5.5.1 0.00000000000000000000000000000000000000000000000000000000000000000000000000000158 278.0
DYD2_k127_3963907_1 Belongs to the FPP GGPP synthase family K13787 - 2.5.1.1,2.5.1.10,2.5.1.29 0.000000000000000000000000000000000000000000000000000000000000000000000001598 267.0
DYD2_k127_3963907_2 COG3407 Mevalonate pyrophosphate decarboxylase K17942 - 4.1.1.99 0.000000000000000000000000000000000000000000000000000000000000003307 230.0
DYD2_k127_3963907_3 Prenyltransferase that catalyzes the transfer of the geranylgeranyl moiety of geranylgeranyl diphosphate (GGPP) to the C3 hydroxyl of sn-glycerol-1-phosphate (G1P). This reaction is the first ether-bond-formation step in the biosynthesis of archaeal membrane lipids K17104 GO:0000107,GO:0003674,GO:0003824,GO:0016740,GO:0016757,GO:0016763 2.5.1.41 0.000000000000000000000000000000000000000000000000000001406 196.0
DYD2_k127_3963907_4 Prenyltransferase that catalyzes the transfer of the geranylgeranyl moiety of geranylgeranyl diphosphate (GGPP) to the C2 hydroxyl of (S)-3-O-geranylgeranylglyceryl phosphate (GGGP). This reaction is the second ether-bond-formation step in the biosynthesis of archaeal membrane lipids K17105 - 2.5.1.42 0.00000000000000000000000000000009859 135.0
DYD2_k127_3963907_5 PFAM 4Fe-4S ferredoxin, iron-sulfur binding domain protein - - - 0.0000000006523 62.0
DYD2_k127_3963907_6 Prenyltransferase that catalyzes the transfer of the geranylgeranyl moiety of geranylgeranyl diphosphate (GGPP) to the C3 hydroxyl of sn-glycerol-1-phosphate (G1P). This reaction is the first ether-bond-formation step in the biosynthesis of archaeal membrane lipids K17104 GO:0000107,GO:0003674,GO:0003824,GO:0016740,GO:0016757,GO:0016763 2.5.1.41 0.000000001856 61.0
DYD2_k127_3963907_7 metal-dependent membrane protease K07052 - - 0.000004541 57.0
DYD2_k127_3968839_0 Essential cell division protein that forms a contractile ring structure (Z ring) at the future cell division site. The regulation of the ring assembly controls the timing and the location of cell division. One of the functions of the FtsZ ring is to recruit other cell division proteins to the septum to produce a new cell wall between the dividing cells. Binds GTP and shows GTPase activity K03531 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003564 455.0
DYD2_k127_3968839_1 Belongs to the lyase 1 family. Adenylosuccinate lyase subfamily K01756 GO:0003674,GO:0003824,GO:0004018,GO:0006139,GO:0006163,GO:0006164,GO:0006167,GO:0006725,GO:0006753,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009117,GO:0009123,GO:0009124,GO:0009126,GO:0009127,GO:0009150,GO:0009152,GO:0009156,GO:0009161,GO:0009165,GO:0009167,GO:0009168,GO:0009259,GO:0009260,GO:0009987,GO:0016829,GO:0016840,GO:0016842,GO:0017144,GO:0018130,GO:0019438,GO:0019637,GO:0019693,GO:0034641,GO:0034654,GO:0044208,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0046033,GO:0046390,GO:0046483,GO:0055086,GO:0070626,GO:0071704,GO:0072521,GO:0072522,GO:0090407,GO:1901135,GO:1901137,GO:1901293,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576 4.3.2.2 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003607 421.0
DYD2_k127_3968839_2 PFAM aminotransferase class V - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000007401 291.0
DYD2_k127_3968839_3 Catalyzes the conversion of N5-carboxyaminoimidazole ribonucleotide (N5-CAIR) to 4-carboxy-5-aminoimidazole ribonucleotide (CAIR) K01588 - 5.4.99.18 0.000000000000000000000000000000000000000006485 159.0
DYD2_k127_3968839_4 Belongs to the acylphosphatase family K01512 GO:0003674,GO:0003824,GO:0003998,GO:0016787,GO:0016817,GO:0016818 3.6.1.7 0.00000000000000000000000007655 110.0
DYD2_k127_3968839_5 pfkB family carbohydrate kinase - - - 0.00004799 55.0
DYD2_k127_3968839_6 histidine kinase, dimerisation and phosphoacceptor region - - - 0.0006353 52.0
DYD2_k127_3975318_0 TonB dependent receptor - - - 0.000005565 59.0
DYD2_k127_3975318_1 X-Pro dipeptidyl-peptidase C-terminal non-catalytic domain K01281 - 3.4.14.11 0.00003375 50.0
DYD2_k127_3992717_0 aminopeptidase K01256 - 3.4.11.2 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005174 633.0
DYD2_k127_3992717_1 Belongs to the GARS family K01945 - 6.3.4.13 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001675 387.0
DYD2_k127_3992717_10 DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates K03059 - 2.7.7.6 0.0000000000001373 71.0
DYD2_k127_3992717_11 PAC2 family K06869 - - 0.0000000000002362 80.0
DYD2_k127_3992717_12 PFAM blue (type 1) copper domain protein K00368 - 1.7.2.1 0.00000000005532 68.0
DYD2_k127_3992717_2 Catalytic component of the exosome, which is a complex involved in RNA degradation. Has 3'- 5' exoribonuclease activity. Can also synthesize heteropolymeric RNA-tails K11600 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000004682 300.0
DYD2_k127_3992717_3 Non-catalytic component of the exosome, which is a complex involved in RNA degradation. Contributes to the structuring of the Rrp41 active site K12589 GO:0000177,GO:0000178,GO:0003674,GO:0003676,GO:0003723,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006139,GO:0006401,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0009056,GO:0009057,GO:0009987,GO:0016070,GO:0016072,GO:0016075,GO:0017091,GO:0019439,GO:0032991,GO:0034641,GO:0034655,GO:0034660,GO:0034661,GO:0043170,GO:0044237,GO:0044238,GO:0044248,GO:0044260,GO:0044265,GO:0044270,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0046700,GO:0071704,GO:0090304,GO:0097159,GO:1901360,GO:1901361,GO:1901363,GO:1901575,GO:1902494,GO:1905354 - 0.000000000000000000000000000000000000000000000000000000000000000000000000003753 268.0
DYD2_k127_3992717_4 Non-catalytic component of the exosome, which is a complex involved in RNA degradation. Increases the RNA binding and the efficiency of RNA degradation. Confers strong poly(A) specificity to the exosome K03679 GO:0000178,GO:0000288,GO:0000291,GO:0000459,GO:0000460,GO:0000466,GO:0000467,GO:0000469,GO:0000956,GO:0003674,GO:0003676,GO:0003723,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0006139,GO:0006364,GO:0006396,GO:0006401,GO:0006402,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0009056,GO:0009057,GO:0009892,GO:0009987,GO:0010467,GO:0010468,GO:0010605,GO:0010629,GO:0016070,GO:0016071,GO:0016072,GO:0016073,GO:0016074,GO:0016180,GO:0019222,GO:0019439,GO:0022613,GO:0031123,GO:0031125,GO:0031126,GO:0032991,GO:0034470,GO:0034472,GO:0034475,GO:0034641,GO:0034655,GO:0034660,GO:0034661,GO:0042254,GO:0043144,GO:0043170,GO:0043628,GO:0043928,GO:0044085,GO:0044237,GO:0044238,GO:0044248,GO:0044260,GO:0044265,GO:0044270,GO:0044424,GO:0044464,GO:0046483,GO:0046700,GO:0048519,GO:0050789,GO:0060255,GO:0065007,GO:0071034,GO:0071043,GO:0071051,GO:0071704,GO:0071840,GO:0090304,GO:0090305,GO:0090501,GO:0090503,GO:0097159,GO:1901360,GO:1901361,GO:1901363,GO:1901575,GO:1902494,GO:1905354 - 0.00000000000000000000000000000000000000000000000000000000000000000213 237.0
DYD2_k127_3992717_5 PFAM Short-chain dehydrogenase reductase SDR K00059 - 1.1.1.100 0.000000000000000000000000000000000000000000000000000000000000001307 230.0
DYD2_k127_3992717_6 Fumarylacetoacetate (FAA) hydrolase family - - - 0.0000000000000000000000000000000000000000000007411 177.0
DYD2_k127_3992717_7 Protein of unknown function DUF72 - - - 0.00000000000000000000000000000000000204 153.0
DYD2_k127_3992717_8 ribosomal protein K02921 - - 0.000000000000000000000000004543 114.0
DYD2_k127_3992717_9 Molecular chaperone capable of stabilizing a range of proteins. Seems to fulfill an ATP-independent, HSP70-like function in archaeal de novo protein folding K04798 - - 0.00000000000000002528 89.0
DYD2_k127_3996419_0 Domain of unknown function DUF87 K06915,K19172 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004969 491.0
DYD2_k127_3996419_1 SbcCD cleaves DNA hairpin structures. These structures can inhibit DNA replication and are intermediates in certain DNA recombination reactions. The complex acts as a 3'- 5' double strand exonuclease that can open hairpins. It also has a 5' single-strand endonuclease activity K03547,K05970 - 3.1.1.53 0.000000000000000000000000000000000000000000000000000000000000000001197 241.0
DYD2_k127_3996419_2 Bacteriocin-protection protein - - - 0.0000000000000000000000000000000000000000000000009957 190.0
DYD2_k127_3996419_3 Putative exonuclease SbcCD, C subunit K03546 - - 0.0000000000000000000000000000000005089 143.0
DYD2_k127_3996419_4 - - - - 0.0000000000000528 80.0
DYD2_k127_3996419_5 NurA - - - 0.00000000005086 74.0
DYD2_k127_3996419_6 Peptidase family M28 K19702 - 3.4.11.24 0.000000004301 69.0
DYD2_k127_4013307_0 Enoyl-CoA hydratase/isomerase K01661 - 4.1.3.36 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009252 444.0
DYD2_k127_4013307_1 Catalyzes the thiamine diphosphate-dependent decarboxylation of 2-oxoglutarate and the subsequent addition of the resulting succinic semialdehyde-thiamine pyrophosphate anion to isochorismate to yield 2-succinyl-5-enolpyruvyl-6-hydroxy-3- cyclohexene-1-carboxylate (SEPHCHC) K02551 - 2.2.1.9 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009295 457.0
DYD2_k127_4013307_10 Converts 2-succinyl-6-hydroxy-2,4-cyclohexadiene-1- carboxylate (SHCHC) to 2-succinylbenzoate (OSB) - - - 0.0000000000000000000000000000000004137 150.0
DYD2_k127_4013307_11 Catalyzes a proton abstraction reaction that results in 2,5-elimination of pyruvate from 2-succinyl-5-enolpyruvyl-6- hydroxy-3-cyclohexene-1-carboxylate (SEPHCHC) and the formation of 2-succinyl-6-hydroxy-2,4-cyclohexadiene-1-carboxylate (SHCHC) K08680 - 4.2.99.20 0.0000000000000000000000000000019 127.0
DYD2_k127_4013307_12 Catalyzes a proton abstraction reaction that results in 2,5-elimination of pyruvate from 2-succinyl-5-enolpyruvyl-6- hydroxy-3-cyclohexene-1-carboxylate (SEPHCHC) and the formation of 2-succinyl-6-hydroxy-2,4-cyclohexadiene-1-carboxylate (SHCHC) K08680 - 4.2.99.20 0.000001756 53.0
DYD2_k127_4013307_2 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain K00074 - 1.1.1.157 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008848 303.0
DYD2_k127_4013307_3 Belongs to the MenA family. Type 1 subfamily K02548 - 2.5.1.74 0.0000000000000000000000000000000000000000000000000000000000000000000000000004005 269.0
DYD2_k127_4013307_4 Methyltransferase required for the conversion of demethylmenaquinol (DMKH2) to menaquinol (MKH2) and the conversion of 2-polyprenyl-6-methoxy-1,4-benzoquinol (DDMQH2) to 2- polyprenyl-3-methyl-6-methoxy-1,4-benzoquinol (DMQH2) K03183 - 2.1.1.163,2.1.1.201 0.00000000000000000000000000000000000000000000000000000000000000000000004583 247.0
DYD2_k127_4013307_5 COG0318 Acyl-CoA synthetases (AMP-forming) AMP-acid ligases II K01911 - 6.2.1.26 0.00000000000000000000000000000000000000000000000000000000000000000008809 251.0
DYD2_k127_4013307_6 Isochorismate synthase K02552 - 5.4.4.2 0.000000000000000000000000000000000000000000000000000000000000000003629 243.0
DYD2_k127_4013307_7 amidohydrolase K07045 - - 0.000000000000000000000000000000000000000000000000000000000000001233 240.0
DYD2_k127_4013307_8 benzoyl-CoA oxygenase K15512 - 1.14.13.208 0.000000000000000000000000000000000000000000000000000000000003435 222.0
DYD2_k127_4013307_9 Enoyl-CoA hydratase/isomerase K15866 - 5.3.3.18 0.00000000000000000000000000000000000000003992 162.0
DYD2_k127_402482_0 Catalyzes the reduction of ribonucleotides to deoxyribonucleotides. May function to provide a pool of deoxyribonucleotide precursors for DNA repair during oxygen limitation and or for immediate growth after restoration of oxygen K00525 - 1.17.4.1 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004619 599.0
DYD2_k127_402482_1 metal-dependent hydrolase with the TIM-barrel fold - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000001569 284.0
DYD2_k127_402482_2 - - - - 0.00000000000000000000000000000000000000000002173 183.0
DYD2_k127_402482_3 peptidase S8 and S53, subtilisin, kexin, sedolisin K17734 - - 0.000000003212 69.0
DYD2_k127_4032577_0 ATPase involved in replication control, Cdc46 Mcm family K10726 - - 2.962e-229 767.0
DYD2_k127_4032577_1 Heat shock 70 kDa protein K04043 - - 2.573e-216 689.0
DYD2_k127_4032577_10 Anion-transporting ATPase - - - 0.0000000000000000000000000000000003615 145.0
DYD2_k127_4032577_11 Belongs to the small heat shock protein (HSP20) family K13993 - - 0.0000000000000000000000000000000005835 138.0
DYD2_k127_4032577_12 COG0500 SAM-dependent methyltransferases - - - 0.0000000000000000000000000004752 124.0
DYD2_k127_4032577_13 Protein of unknown function (DUF424) K09148 - - 0.0000000000000000000005841 100.0
DYD2_k127_4032577_14 Two component, sigma54 specific, transcriptional regulator, Fis family K07714,K19641 - - 0.0000000000000004449 88.0
DYD2_k127_4032577_15 Predicted membrane protein (DUF2085) - - - 0.00000000627 65.0
DYD2_k127_4032577_16 Repeats in polycystic kidney disease 1 (PKD1) and other proteins - - - 0.0001081 53.0
DYD2_k127_4032577_17 Carboxypeptidase regulatory-like domain - - - 0.0001731 53.0
DYD2_k127_4032577_18 - - - - 0.0001941 51.0
DYD2_k127_4032577_19 Repeats in polycystic kidney disease 1 (PKD1) and other proteins - - - 0.0003224 51.0
DYD2_k127_4032577_2 Catalyzes the interconversion of 2-phosphoglycerate and 3-phosphoglycerate K15633 - 5.4.2.12 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006939 522.0
DYD2_k127_4032577_20 - - - - 0.0003772 48.0
DYD2_k127_4032577_3 GTPase of K06942 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000129 413.0
DYD2_k127_4032577_4 ATP binding to DnaK triggers the release of the substrate protein, thus completing the reaction cycle. Several rounds of ATP-dependent interactions between DnaJ, DnaK and GrpE are required for fully efficient folding. Also involved, together with DnaK and GrpE, in the DNA replication of plasmids through activation of initiation proteins K03686 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004223 347.0
DYD2_k127_4032577_5 PFAM Binding-protein-dependent transport system inner membrane component K02063 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007337 319.0
DYD2_k127_4032577_6 Belongs to the ABC transporter superfamily K02052,K02062 - - 0.000000000000000000000000000000000000000000000000000000000000004007 245.0
DYD2_k127_4032577_7 Bacterial extracellular solute-binding protein K02064 - - 0.0000000000000000000000000000000000000000000000000000000000001121 230.0
DYD2_k127_4032577_8 Polymer-forming cytoskeletal - - - 0.0000000000000000000000000000000000000000000000000000001987 208.0
DYD2_k127_4032577_9 Thiamine-phosphate synthase K22206 - - 0.00000000000000000000000000000000001101 147.0
DYD2_k127_4088410_0 Removes the N-terminal methionine from nascent proteins. The N-terminal methionine is often cleaved when the second residue in the primary sequence is small and uncharged (Met-Ala-, Cys, Gly, Pro, Ser, Thr, or Val) K01265 - 3.4.11.18 0.00000000000000000000000000000000000000000000000000000000000000000000000000000292 276.0
DYD2_k127_4088410_1 TIGRFAM Sua5 YciO YrdC YwlC family protein K07566 - 2.7.7.87 0.000000000000000000000000000000000000001447 154.0
DYD2_k127_4088410_2 PFAM helix-turn-helix domain protein K03627 - - 0.000000000000000000246 94.0
DYD2_k127_4088410_3 Facilitates transcription termination by a mechanism that involves Rho binding to the nascent RNA, activation of Rho's RNA-dependent ATPase activity, and release of the mRNA from the DNA template K03628 - - 0.00000000000000002315 82.0
DYD2_k127_4094914_0 eIF-2 functions in the early steps of protein synthesis by forming a ternary complex with GTP and initiator tRNA K03242 - - 0.0000000000000000000000000000000000000000000000000000000000000000137 227.0
DYD2_k127_4094914_1 Belongs to the eukaryotic ribosomal protein eS6 family K02991 GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0006139,GO:0006364,GO:0006396,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0009987,GO:0010467,GO:0015935,GO:0016070,GO:0016072,GO:0022613,GO:0022626,GO:0022627,GO:0032991,GO:0034470,GO:0034641,GO:0034660,GO:0042254,GO:0042274,GO:0043170,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0044085,GO:0044237,GO:0044238,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:0046483,GO:0071704,GO:0071840,GO:0090304,GO:1901360,GO:1990904 - 0.000000000000000000000000000000000000005095 149.0
DYD2_k127_4094914_2 Repeats in polycystic kidney disease 1 (PKD1) and other proteins - - - 0.000001638 59.0
DYD2_k127_4094914_3 Repeats in polycystic kidney disease 1 (PKD1) and other proteins - - - 0.0001347 52.0
DYD2_k127_4094914_4 TonB dependent receptor K02014 - - 0.0007513 51.0
DYD2_k127_4103148_0 amino acids such as threonine, to avoid such errors, it has a posttransfer editing activity that hydrolyzes mischarged Thr-tRNA(Val) in a tRNA-dependent manner K01873 GO:0003674,GO:0003824,GO:0004812,GO:0004832,GO:0006082,GO:0006139,GO:0006399,GO:0006412,GO:0006418,GO:0006438,GO:0006518,GO:0006520,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0016070,GO:0016874,GO:0016875,GO:0019538,GO:0019752,GO:0034641,GO:0034645,GO:0034660,GO:0043038,GO:0043039,GO:0043043,GO:0043170,GO:0043436,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044281,GO:0046483,GO:0071704,GO:0090304,GO:0140098,GO:0140101,GO:1901360,GO:1901564,GO:1901566,GO:1901576 6.1.1.9 0.000000000000000000000000000000000000000000000000000000007981 206.0
DYD2_k127_4103148_1 Rhodanese Homology Domain - - - 0.000000000000001286 81.0
DYD2_k127_4103148_2 protein conserved in archaea - - - 0.000001881 57.0
DYD2_k127_4103148_3 SMART DNA-directed DNA polymerase B K02319 - 2.7.7.7 0.000003707 61.0
DYD2_k127_4103148_4 EamA-like transporter family - - - 0.00002236 56.0
DYD2_k127_4103148_5 LVIVD repeat - - - 0.0006812 52.0
DYD2_k127_4108791_0 Directs the termination of nascent peptide synthesis (translation) in response to the termination codons UAA, UAG and UGA K03265 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000141 423.0
DYD2_k127_4108791_1 hydrolase activity, acting on ester bonds - - - 0.0000000000000000000000000000000000000000000000000000000000000003702 229.0
DYD2_k127_4108791_2 Cleaves both 3' and 5' ssDNA extremities of branched DNA structures K07503 - - 0.00000000000000000000000000000000000000000000008471 182.0
DYD2_k127_4108791_3 Catalyzes the reversible phosphorylation of UMP to UDP K09903 - 2.7.4.22 0.000000000000000000000000000000000000000000005636 173.0
DYD2_k127_4108791_4 PFAM NMD3 family K07562 - - 0.000000000000000000000000000000000000001521 161.0
DYD2_k127_4108791_5 PAS fold - - - 0.000000000000000000000000000000365 132.0
DYD2_k127_4108791_6 Catalytic subunit of DNA primase, an RNA polymerase that catalyzes the synthesis of short RNA molecules used as primers for DNA polymerase during DNA replication. The small subunit contains the primase catalytic core and has DNA synthesis activity on its own. Binding to the large subunit stabilizes and modulates the activity, increasing the rate of DNA synthesis while decreasing the length of the DNA fragments, and conferring RNA synthesis capability. The DNA polymerase activity may enable DNA primase to also catalyze primer extension after primer synthesis. May also play a role in DNA repair K02683 - - 0.0000000000000000000001149 102.0
DYD2_k127_4108791_7 phosphoesterase RecJ domain protein K07463 - - 0.0000001274 64.0
DYD2_k127_4134751_0 Predicted membrane protein (DUF2070) K08979 - - 0.00000000000000000000000000000000000000000000000000000000000000000006457 247.0
DYD2_k127_4134751_1 CoA-transferase family III - - - 0.00000000000000000000000000000000000000002003 167.0
DYD2_k127_4147939_0 Belongs to the peptidase S16 family K04076 - 3.4.21.53 0.00000000000000000000000000000000145 137.0
DYD2_k127_4232785_0 PFAM PilT protein domain protein K06865 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002703 604.0
DYD2_k127_4232785_1 PFAM type II secretion system protein E K07332 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006431 510.0
DYD2_k127_4232785_10 DNA binding protein K06930 - - 0.0000000000000000000005809 108.0
DYD2_k127_4232785_11 HD domain - - - 0.000000000000000000001968 103.0
DYD2_k127_4232785_12 exporters of the RND superfamily - - - 0.000000000000001242 92.0
DYD2_k127_4232785_13 Belongs to the UPF0273 family - - - 0.000000000005066 78.0
DYD2_k127_4232785_14 Roadblock LC7 family protein K06945,K07131 - - 0.00000007062 60.0
DYD2_k127_4232785_15 Pfam:DUF1628 - - - 0.00009787 56.0
DYD2_k127_4232785_2 TIGRFAM histone acetyltransferase, ELP3 family K07739 - 2.3.1.48 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001346 464.0
DYD2_k127_4232785_3 Aminotransferase class-V K11717 - 2.8.1.7,4.4.1.16 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002059 374.0
DYD2_k127_4232785_4 small GTP-binding protein K06945 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000007287 274.0
DYD2_k127_4232785_5 HTH-type transcriptional regulatory protein K07728 - - 0.000000000000000000000000000000000000000000000000000000000000001171 230.0
DYD2_k127_4232785_6 Type II secretion system (T2SS), protein F K07333 - - 0.00000000000000000000000000000000000000000000002124 182.0
DYD2_k127_4232785_7 His Kinase A (phosphoacceptor) domain - - - 0.00000000000000000000000000000000000000006289 164.0
DYD2_k127_4232785_8 Type II secretion system (T2SS), protein F K07333 - - 0.000000000000000000000000000000000000000412 172.0
DYD2_k127_4232785_9 Participates actively in the response to hyperosmotic and heat shock by preventing the aggregation of stress-denatured proteins, in association with DnaK and GrpE. It is the nucleotide exchange factor for DnaK and may function as a thermosensor. Unfolded proteins bind initially to DnaJ K03687 GO:0000166,GO:0000774,GO:0001871,GO:0003674,GO:0005488,GO:0005515,GO:0005575,GO:0005623,GO:0008150,GO:0009986,GO:0017076,GO:0030234,GO:0030246,GO:0030247,GO:0030554,GO:0036094,GO:0044464,GO:0050790,GO:0051082,GO:0060589,GO:0060590,GO:0065007,GO:0065009,GO:0097159,GO:0098772,GO:1901265,GO:1901363,GO:2001065 - 0.000000000000000000000003784 109.0
DYD2_k127_4234853_0 Catalyzes the biosynthesis of agmatine from arginine K01585 - 4.1.1.19 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008057 559.0
DYD2_k127_4234853_1 Deoxyhypusine synthase K00809 - 2.5.1.46 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000421 292.0
DYD2_k127_4234853_2 CoA binding domain K06929 - - 0.000000000000000000000000000000001503 134.0
DYD2_k127_4234853_3 Protein of unknown function (DUF3772) K05802 - - 0.000000000000000000000000000001977 137.0
DYD2_k127_4234853_4 Belongs to the CDP-alcohol phosphatidyltransferase class-I family K17884 - 2.7.8.39 0.0000000000000000004556 93.0
DYD2_k127_4234853_5 Lrp/AsnC ligand binding domain - - - 0.000001289 53.0
DYD2_k127_4237868_0 Catalyzes the attachment of alanine to tRNA(Ala) in a two-step reaction alanine is first activated by ATP to form Ala- AMP and then transferred to the acceptor end of tRNA(Ala). Also edits incorrectly charged Ser-tRNA(Ala) and Gly-tRNA(Ala) via its editing domain K01872 - 6.1.1.7 1.304e-276 878.0
DYD2_k127_4237868_1 Required for chromosome condensation and partitioning K03529 - - 2.563e-215 714.0
DYD2_k127_4237868_2 Elongator protein 3, MiaB family, Radical SAM K06936 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000033 294.0
DYD2_k127_4237868_3 chromosome segregation and condensation protein ScpA K05896 - - 0.000000000000000000000000000000000000000000000669 178.0
DYD2_k127_4237868_4 TIGRFAM segregation and condensation protein B K06024 - - 0.0000000000000000000000000000000005396 139.0
DYD2_k127_4237868_5 Patch-forming domain C2 of tRNA-guanine transglycosylase K07557 GO:0002927,GO:0006139,GO:0006396,GO:0006399,GO:0006400,GO:0006725,GO:0006807,GO:0008033,GO:0008150,GO:0008152,GO:0009058,GO:0009451,GO:0009987,GO:0010467,GO:0016070,GO:0034470,GO:0034641,GO:0034660,GO:0043170,GO:0043412,GO:0044237,GO:0044238,GO:0046483,GO:0071704,GO:0090304,GO:1901360 2.6.1.97 0.000000000000000000000000000000002563 136.0
DYD2_k127_4237868_6 Domain of unknown function (DUF4234) - - - 0.0001992 50.0
DYD2_k127_4251591_0 Belongs to the peptidase S16 family K04076 - 3.4.21.53 2.223e-249 786.0
DYD2_k127_4257932_0 Catalyzes the conversion of urocanate to 4-imidazolone- 5-propionate K01712 - 4.2.1.49 9.233e-201 634.0
DYD2_k127_4257932_1 PP-loop family - - - 0.00000000000000000000000000000000000000000000000000000000001321 214.0
DYD2_k127_4257932_2 Repeats in polycystic kidney disease 1 (PKD1) and other proteins K01179 - 3.2.1.4 0.000002833 58.0
DYD2_k127_4266885_0 AAA domain, putative AbiEii toxin, Type IV TA system K01990 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002656 357.0
DYD2_k127_4266885_1 Zn-dependent hydrolases of the beta-lactamase fold - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000001568 282.0
DYD2_k127_4266885_10 Secreted protein containing C-terminal beta-propeller domain distantly related to WD-40 repeats - - - 0.0000000000003864 82.0
DYD2_k127_4266885_11 PFAM peptidase U32 K08303 - - 0.00000000003684 66.0
DYD2_k127_4266885_12 protein conserved in archaea - - - 0.000000000258 73.0
DYD2_k127_4266885_13 NfeD-like C-terminal, partner-binding K07403 - - 0.0000001614 58.0
DYD2_k127_4266885_14 - - - - 0.0000001672 61.0
DYD2_k127_4266885_15 Antibiotic biosynthesis monooxygenase - - - 0.000004529 52.0
DYD2_k127_4266885_2 DNA repair enzyme that has both DNA N-glycosylase activity and AP-lyase activity. The DNA N-glycosylase activity releases various damaged pyrimidines from DNA by cleaving the N- glycosidic bond, leaving an AP (apurinic apyrimidinic) site. The AP-lyase activity cleaves the phosphodiester bond 3' to the AP site by a beta-elimination, leaving a 3'-terminal unsaturated sugar and a product with a terminal 5'-phosphate K10773 - 4.2.99.18 0.0000000000000000000000000000000000000000000000000000000000000000003465 235.0
DYD2_k127_4266885_3 Aminotransferase class-V - - - 0.000000000000000000000000000000000000000000000000000000000006353 224.0
DYD2_k127_4266885_4 alkyl hydroperoxide reductase Thiol specific antioxidant Mal allergen K03564 - 1.11.1.15 0.00000000000000000000000000000000000000000000000000000006286 200.0
DYD2_k127_4266885_5 PFAM ABC-2 type transporter K01992 - - 0.0000000000000000000000000000000000000000000000000000001505 208.0
DYD2_k127_4266885_6 peroxiredoxin activity - - - 0.000000000000000000000000000000000000000000000000008477 187.0
DYD2_k127_4266885_7 Cobalamin adenosyltransferase K00798 - 2.5.1.17 0.000000000000000000000000000000000000000007133 162.0
DYD2_k127_4266885_8 Kelch motif - - - 0.000000000000000000000000000002096 138.0
DYD2_k127_4266885_9 ACT domain protein - - - 0.00000000000002506 79.0
DYD2_k127_428419_0 PFAM Phenylalanine and histidine ammonia-lyase K01745,K10775 GO:0003674,GO:0003824,GO:0006082,GO:0006520,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009072,GO:0009698,GO:0009699,GO:0009800,GO:0009803,GO:0009987,GO:0016043,GO:0016053,GO:0016829,GO:0016840,GO:0016841,GO:0019438,GO:0019748,GO:0019752,GO:0022607,GO:0032787,GO:0042537,GO:0043436,GO:0043933,GO:0044085,GO:0044237,GO:0044238,GO:0044249,GO:0044281,GO:0044283,GO:0044550,GO:0045548,GO:0046394,GO:0051259,GO:0051260,GO:0051262,GO:0051289,GO:0065003,GO:0071704,GO:0071840,GO:0072330,GO:1901360,GO:1901362,GO:1901564,GO:1901576 4.3.1.24,4.3.1.3 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002704 544.0
DYD2_k127_428419_1 Belongs to the metallo-dependent hydrolases superfamily. HutI family K01468 - 3.5.2.7 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001297 354.0
DYD2_k127_428419_2 Catalyzes the conversion of urocanate to 4-imidazolone- 5-propionate K01712 - 4.2.1.49 0.000000000000000000000000000000000000003549 147.0
DYD2_k127_4290315_0 Part of the RFC clamp loader complex which loads the PCNA sliding clamp onto DNA K04801 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004232 419.0
DYD2_k127_4290315_1 acetylornithine deacetylase or succinyl-diaminopimelate desuccinylase K01439 - 3.5.1.18 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000584 415.0
DYD2_k127_4290315_10 X-Pro dipeptidyl-peptidase C-terminal non-catalytic domain - - - 0.000000000000000000000000000000000000000000000001484 199.0
DYD2_k127_4290315_11 X-Pro dipeptidyl-peptidase C-terminal non-catalytic domain - - - 0.00000000000000000000000000000003075 144.0
DYD2_k127_4290315_12 proteolysis - - - 0.0000000000000000000000000004068 120.0
DYD2_k127_4290315_13 COG3425 3-hydroxy-3-methylglutaryl CoA synthase K01641,K07068 - 2.3.3.10 0.0000000000000000000007549 107.0
DYD2_k127_4290315_14 - - - - 0.0000000000000000004781 96.0
DYD2_k127_4290315_15 Small multi-drug export protein - - - 0.0000000000000000006428 99.0
DYD2_k127_4290315_16 Acid phosphatase homologues K19302 - 3.6.1.27 0.00000000000009297 83.0
DYD2_k127_4290315_17 DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates K03056 - 2.7.7.6 0.00000000002351 68.0
DYD2_k127_4290315_18 Transcriptional regulator - - - 0.000000000147 75.0
DYD2_k127_4290315_19 Copper binding proteins, plastocyanin/azurin family - - - 0.000000009872 66.0
DYD2_k127_4290315_2 Belongs to the thiolase family K00626,K00632 - 2.3.1.16,2.3.1.9 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001511 393.0
DYD2_k127_4290315_20 TonB dependent receptor - - - 0.0000006031 61.0
DYD2_k127_4290315_21 TonB dependent receptor - - - 0.000002922 59.0
DYD2_k127_4290315_22 domain protein - - - 0.00002923 55.0
DYD2_k127_4290315_23 cobalamin-transporting ATPase activity - - - 0.00003299 53.0
DYD2_k127_4290315_24 guanyl-nucleotide exchange factor activity - - - 0.0002878 52.0
DYD2_k127_4290315_3 Pyridoxal-phosphate dependent enzyme K12339,K21148 - 2.5.1.113,2.5.1.47 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002313 359.0
DYD2_k127_4290315_4 Component of the wyosine derivatives biosynthesis pathway that catalyzes the condensation of N-methylguanine with 2 carbon atoms from pyruvate to form the tricyclic 4-demethylwyosine (imG-14) on guanosine-37 of tRNA(Phe) K15449 - 4.1.3.44 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000023 298.0
DYD2_k127_4290315_5 Could be responsible for synthesis of pseudouridine from uracil-13 in transfer RNAs K06176 GO:0001522,GO:0003674,GO:0003824,GO:0006139,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0009451,GO:0009982,GO:0009987,GO:0016070,GO:0016853,GO:0016866,GO:0034641,GO:0043170,GO:0043412,GO:0044237,GO:0044238,GO:0046483,GO:0071704,GO:0090304,GO:1901360 5.4.99.27 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000002052 294.0
DYD2_k127_4290315_6 L-asparaginase II - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000004806 282.0
DYD2_k127_4290315_7 Removes the 2'-phosphate from RNA via an intermediate in which the phosphate is ADP-ribosylated by NAD followed by a presumed transesterification to release the RNA and generate ADP- ribose 1''-2''-cyclic phosphate (APPR P). May function as an ADP- ribosylase K07559 - - 0.000000000000000000000000000000000000000000000000000000000000141 219.0
DYD2_k127_4290315_8 eIF-2 functions in the early steps of protein synthesis by forming a ternary complex with GTP and initiator tRNA K03238 - - 0.0000000000000000000000000000000000000000000000002068 187.0
DYD2_k127_4290315_9 TIGRFAM RNA methyltransferase, TrmH family, group 1 K02533 - - 0.000000000000000000000000000000000000000000000001163 184.0
DYD2_k127_4322016_0 Glutaryl-7-ACA acylase - - - 0.000000009771 65.0
DYD2_k127_4322016_1 receptor - - - 0.0005701 51.0
DYD2_k127_4343571_0 Glyceraldehyde-3-phosphate dehydrogenase K00150 - 1.2.1.59 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009485 384.0
DYD2_k127_4343571_1 SAICAR synthetase K01923 - 6.3.2.6 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001761 356.0
DYD2_k127_4343571_2 ATPase activity K01990,K19340 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002723 341.0
DYD2_k127_4343571_3 Presumably involved in the processing and regular turnover of intracellular proteins. Catalyzes the removal of unsubstituted N-terminal amino acids from various peptides K01255 - 3.4.11.1 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002211 343.0
DYD2_k127_4343571_4 AAA domain, putative AbiEii toxin, Type IV TA system K01990 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004485 309.0
DYD2_k127_4343571_5 beta-N-acetylhexosaminidase activity K04618 - 1.1.3.9 0.000000000000000000000000001225 129.0
DYD2_k127_4343571_6 protein contain chitin-binding domain type 3 K01183,K21606 - 3.2.1.14,3.2.1.202 0.000000000000000000000001141 120.0
DYD2_k127_4343571_7 ABC-type transport system involved in multi-copper enzyme maturation permease component K01992 - - 0.0000000000004805 80.0
DYD2_k127_4343571_8 Membrane-bound metal-dependent hydrolase - - - 0.0000000001611 69.0
DYD2_k127_4343571_9 ABC-2 family transporter protein K01992 - - 0.00004975 54.0
DYD2_k127_4352263_0 PFAM blue (type 1) copper domain protein K00368,K22348,K22349 - 1.16.3.3,1.7.2.1 0.00000000000000000000000000000000000000000000000000000003049 212.0
DYD2_k127_4352263_1 Serine threonine protein kinase - - - 0.000000000000000000000000000000000000000000000000004509 196.0
DYD2_k127_4352263_2 von Willebrand factor, type A K07114 - - 0.00000000000000000000000000000000000000000003401 171.0
DYD2_k127_4352263_3 Psort location Cytoplasmic, score 8.96 - - - 0.0000000000000000009377 93.0
DYD2_k127_4352263_5 SMART metal-dependent phosphohydrolase, HD region K01139 - 2.7.6.5,3.1.7.2 0.00000000001252 71.0
DYD2_k127_4352263_6 LVIVD repeat - - - 0.000000006428 68.0
DYD2_k127_4352263_7 Protein phosphatase 2C - - - 0.000000108 62.0
DYD2_k127_4352263_8 Uncharacterized conserved protein (DUF2293) - - - 0.000004035 51.0
DYD2_k127_4359575_0 Thrombospondin type 3 repeat - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001479 496.0
DYD2_k127_4359575_1 - - - - 0.0000000000002845 83.0
DYD2_k127_4359575_3 membrane protein domain - - - 0.0000000000503 70.0
DYD2_k127_4359575_4 Drug exporters of the RND superfamily K06994 - - 0.0000007059 63.0
DYD2_k127_4387882_0 pfam abc1 K03688 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000003735 302.0
DYD2_k127_4387882_1 membrane - - - 0.0000000000000001146 93.0
DYD2_k127_4387882_2 membrane protein domain - - - 0.00000000002795 76.0
DYD2_k127_4387882_3 Domain of unknown function (DUF4234) - - - 0.0000004994 61.0
DYD2_k127_439279_0 DNA ligase that seals nicks in double-stranded DNA during DNA replication, DNA recombination and DNA repair K10747 - 6.5.1.1,6.5.1.6,6.5.1.7 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000096 542.0
DYD2_k127_439279_1 Catalyzes two steps in the biosynthesis of coenzyme A. In the first step cysteine is conjugated to 4'-phosphopantothenate to form 4-phosphopantothenoylcysteine, in the latter compound is decarboxylated to form 4'-phosphopantotheine K13038 - 4.1.1.36,6.3.2.5 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002148 322.0
DYD2_k127_439279_2 Histone deacetylase domain - - - 0.000000000000000000000000000000000000000000000000000000000000000004308 237.0
DYD2_k127_439279_3 PAC2 family K06869 - - 0.00000000000000000000000000000000000000000000000000000003281 205.0
DYD2_k127_439279_4 Ribosomal protein L11 methyltransferase (PrmA) K07579 - - 0.000000000000000000000000000000000000000003002 169.0
DYD2_k127_439279_5 PFAM GHMP kinase K06982 - 2.7.1.169 0.000000000000000000000000000000000000305 155.0
DYD2_k127_439279_6 acyl-CoA dehydrogenase - - - 0.000000000000000000000000006797 115.0
DYD2_k127_443265_0 Belongs to the pirin family K06911 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009486 462.0
DYD2_k127_443265_1 Belongs to the ALAD family K01698 - 4.2.1.24 0.00000000000000000000000000000000000000000000000000000000000000000000000001382 254.0
DYD2_k127_4445387_0 Cys/Met metabolism PLP-dependent enzyme K01739,K01761 - 2.5.1.48,4.4.1.11 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005639 327.0
DYD2_k127_4445387_1 COG1290 Cytochrome b subunit of the bc complex - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000001616 289.0
DYD2_k127_4445387_10 PFAM Glycosyl hydrolases family 38 C-terminal domain - - - 0.0008666 51.0
DYD2_k127_4445387_2 Belongs to the class I-like SAM-binding methyltransferase superfamily. RsmB NOP family - GO:0001510,GO:0003674,GO:0003824,GO:0006139,GO:0006396,GO:0006399,GO:0006400,GO:0006725,GO:0006807,GO:0008033,GO:0008150,GO:0008152,GO:0008168,GO:0008173,GO:0008175,GO:0008757,GO:0009451,GO:0009987,GO:0010467,GO:0016070,GO:0016427,GO:0016428,GO:0016740,GO:0016741,GO:0030488,GO:0032259,GO:0034470,GO:0034641,GO:0034660,GO:0043170,GO:0043412,GO:0043414,GO:0044237,GO:0044238,GO:0044260,GO:0046483,GO:0071704,GO:0090304,GO:0140098,GO:0140101,GO:1901360 - 0.000000000000000000000000000000000000000000000000000000000000004836 230.0
DYD2_k127_4445387_3 COG1290 Cytochrome b subunit of the bc complex - - - 0.000000000000000000000000000000000000002792 159.0
DYD2_k127_4445387_4 COG0723 Rieske Fe-S protein - - - 0.00000000000000000003234 100.0
DYD2_k127_4445387_5 Glycerophosphoryl diester phosphodiesterase family K01126 - 3.1.4.46 0.0000000000006809 78.0
DYD2_k127_4445387_6 TonB dependent receptor - - - 0.000000004161 68.0
DYD2_k127_4445387_7 NUDIX domain - - - 0.000000004739 63.0
DYD2_k127_4445387_8 Glutaredoxin-like domain (DUF836) - GO:0005575,GO:0005623,GO:0005886,GO:0016020,GO:0044464,GO:0071944 - 0.00007346 55.0
DYD2_k127_4445387_9 Transcriptional regulator, ArsR family - - - 0.0001308 55.0
DYD2_k127_4446777_0 Cys/Met metabolism PLP-dependent enzyme K01758 - 4.4.1.1 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004704 425.0
DYD2_k127_4446777_1 Acyl-CoA dehydrogenase, N-terminal domain K00248,K00249 - 1.3.8.1,1.3.8.7 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006683 371.0
DYD2_k127_4446777_10 Methylenetetrahydrofolate reductase K00297 - 1.5.1.20 0.0000000000000000000000000000000000000000000000001492 190.0
DYD2_k127_4446777_11 THUMP K03151 - 2.8.1.4 0.0000000000000000000000000000000000000000000003297 179.0
DYD2_k127_4446777_12 PFAM Homoserine dehydrogenase K00003 - 1.1.1.3 0.0000000000000000000000000000000000004756 154.0
DYD2_k127_4446777_13 methyltransferase - - - 0.00000000000000000000000000000000000578 153.0
DYD2_k127_4446777_14 Helix-turn-helix XRE-family like proteins - - - 0.00000000000000000000000000000167 128.0
DYD2_k127_4446777_15 Catalyzes the transfer of a methyl group from 5- methyltetrahydrofolate to homocysteine resulting in methionine formation K00549 - 2.1.1.14 0.00000000000000000000000001803 126.0
DYD2_k127_4446777_16 transferase activity, transferring acyl groups other than amino-acyl groups - - - 0.000000000000000000000004556 115.0
DYD2_k127_4446777_17 Protein of unknown function (DUF2723) - - - 0.00000000000000000002553 106.0
DYD2_k127_4446777_19 Selenocysteine lyase - - - 0.00000000000000004616 83.0
DYD2_k127_4446777_2 PFAM Glycosyl transferase family 2 K19003 - 2.4.1.336 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001219 379.0
DYD2_k127_4446777_20 Transcriptional regulator - - - 0.0000000000000006251 88.0
DYD2_k127_4446777_21 PFAM Glyoxalase bleomycin resistance protein dioxygenase - - - 0.000000000000003352 84.0
DYD2_k127_4446777_22 Glycosyltransferase family 87 - - - 0.0000000000000391 87.0
DYD2_k127_4446777_23 sh3 domain protein - - - 0.000006947 60.0
DYD2_k127_4446777_24 Glycosyltransferase WbsX - - - 0.0001089 56.0
DYD2_k127_4446777_25 - K21029 - 2.7.7.80 0.0002841 48.0
DYD2_k127_4446777_3 Cobalamin-independent synthase, Catalytic domain K00549 - 2.1.1.14 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000348 365.0
DYD2_k127_4446777_4 Aminotransferase class-V K11717 - 2.8.1.7,4.4.1.16 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004369 329.0
DYD2_k127_4446777_5 Short-chain dehydrogenase reductase SDR - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000028 322.0
DYD2_k127_4446777_6 Pyridoxal-phosphate dependent enzyme K01697,K01738 - 2.5.1.47,4.2.1.22 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000002744 305.0
DYD2_k127_4446777_7 PFAM peptidase U62 modulator of DNA gyrase K03568 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000273 295.0
DYD2_k127_4446777_8 Belongs to the peptidase S8 family - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000007002 286.0
DYD2_k127_4446777_9 PFAM peptidase U62 modulator of DNA gyrase K03592 - - 0.00000000000000000000000000000000000000000000000000000000001635 228.0
DYD2_k127_4466240_0 Major facilitator superfamily - - - 2.346e-197 629.0
DYD2_k127_4466240_1 alcohol dehydrogenase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002327 340.0
DYD2_k127_4466240_2 PFAM alpha beta hydrolase fold - - - 0.00000000000000000000000000000000000000000000000000000000000000000000002736 251.0
DYD2_k127_4466240_3 PFAM Cupin 2, conserved barrel - - - 0.00000000000000000000000000000005439 129.0
DYD2_k127_4466240_4 dipeptidyl-peptidase K01281 - 3.4.14.11 0.0000000000000000000000000007928 130.0
DYD2_k127_4466240_5 methyltransferase - - - 0.00000000000004269 81.0
DYD2_k127_4466240_7 WD-40 repeat-containing protein K12132 - 2.7.11.1 0.00007003 55.0
DYD2_k127_4473558_0 TIGRFAM CRISPR-associated protein Cas4 K07464 - 3.1.12.1 0.00000000000000000000000000000000001962 147.0
DYD2_k127_4473558_1 Catalyzes the formation of CDP-2,3-bis-(O- geranylgeranyl)-sn-glycerol (CDP-archaeol) from 2,3-bis-(O- geranylgeranyl)-sn-glycerol 1-phosphate (DGGGP) and CTP. This reaction is the third ether-bond-formation step in the biosynthesis of archaeal membrane lipids K19664 - 2.7.7.67 0.0000000000000000000000000000003845 130.0
DYD2_k127_4473558_2 FIST C domain - - - 0.00000000000005211 74.0
DYD2_k127_4473558_3 - - - - 0.00005135 49.0
DYD2_k127_4473558_4 PIN domain K07065 - - 0.0006514 49.0
DYD2_k127_4507997_0 DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates K03047 - 2.7.7.6 0.00000000000000000000000000000000000000000000000000000000002499 215.0
DYD2_k127_4507997_1 One of the primary rRNA binding proteins, it binds directly to 16S rRNA where it nucleates assembly of the body of the 30S subunit K02986 GO:0003674,GO:0003676,GO:0003723,GO:0003735,GO:0005198,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005840,GO:0006417,GO:0006450,GO:0008150,GO:0009889,GO:0009891,GO:0009893,GO:0010468,GO:0010556,GO:0010557,GO:0010604,GO:0010608,GO:0010628,GO:0015935,GO:0019222,GO:0019843,GO:0031323,GO:0031325,GO:0031326,GO:0031328,GO:0032268,GO:0032270,GO:0032991,GO:0034248,GO:0034250,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044446,GO:0044464,GO:0045727,GO:0045903,GO:0048518,GO:0048522,GO:0050789,GO:0050794,GO:0051171,GO:0051173,GO:0051246,GO:0051247,GO:0060255,GO:0065007,GO:0065008,GO:0080090,GO:0097159,GO:1901363,GO:1990904,GO:2000112 - 0.000000000000000000000000000000000000000000000000000000001728 208.0
DYD2_k127_4507997_2 Located on the platform of the 30S subunit K02948 GO:0000028,GO:0000462,GO:0003674,GO:0003676,GO:0003723,GO:0003729,GO:0003735,GO:0005198,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0006139,GO:0006364,GO:0006396,GO:0006412,GO:0006518,GO:0006725,GO:0006807,GO:0006996,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0015935,GO:0016043,GO:0016070,GO:0016072,GO:0019538,GO:0019843,GO:0022607,GO:0022613,GO:0022618,GO:0022626,GO:0022627,GO:0030490,GO:0032991,GO:0034470,GO:0034622,GO:0034641,GO:0034645,GO:0034660,GO:0042254,GO:0042255,GO:0042274,GO:0043043,GO:0043170,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043603,GO:0043604,GO:0043933,GO:0044085,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:0046483,GO:0048027,GO:0065003,GO:0070181,GO:0070925,GO:0071704,GO:0071826,GO:0071840,GO:0090304,GO:0097159,GO:1901360,GO:1901363,GO:1901564,GO:1901566,GO:1901576,GO:1990904 - 0.00000000000000000000000000000000000000000000000000000001625 199.0
DYD2_k127_4507997_3 Located at the top of the head of the 30S subunit, it contacts several helices of the 16S rRNA. In the 70S ribosome it contacts the 23S rRNA (bridge B1a) and protein L5 of the 50S subunit (bridge B1b), connecting the 2 subunits K02952 - - 0.000000000000000000000000000000000000002371 156.0
DYD2_k127_4507997_4 Filamentation induced by cAMP protein fic - - - 0.00000000000000000004666 102.0
DYD2_k127_4507997_5 response regulator K07315 - 3.1.3.3 0.000004166 56.0
DYD2_k127_4520288_0 Belongs to the LDH MDH superfamily K00024 GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0044424,GO:0044464 1.1.1.37 0.000000000000000000000000000000000000000000000000000000000000000000000000000001003 273.0
DYD2_k127_4520288_1 Cytochrome C assembly protein K02195 - - 0.000000000000000000000000000000000000001012 156.0
DYD2_k127_4520288_2 PFAM cytochrome c-type biogenesis protein CcmB K02194 - - 0.0000000000000000000000000000000000002066 149.0
DYD2_k127_4520288_3 AAA domain, putative AbiEii toxin, Type IV TA system K01990 - - 0.000000000000000000000000000000000011 144.0
DYD2_k127_4520288_4 superoxide dismutase activity K04565 - 1.15.1.1 0.00000000000000000000000003033 115.0
DYD2_k127_4520288_5 TonB dependent receptor K02014 - - 0.0003891 51.0
DYD2_k127_4552915_0 Belongs to the Dps family K04047 - - 0.0000000000000000000000000000000000000000000000001047 184.0
DYD2_k127_4552915_1 Nucleotidyl transferase AbiEii toxin, Type IV TA system - - - 0.0000000001574 72.0
DYD2_k127_4552915_2 Belongs to the glycosyl hydrolase 26 family - - - 0.000007581 49.0
DYD2_k127_4627095_0 3-Demethylubiquinone-9 3-methyltransferase - - - 0.00000000000000000000000000000000000000000001169 167.0
DYD2_k127_4627095_1 Haemolysin-III related K11068 - - 0.00000000000000000000000000000000000001506 157.0
DYD2_k127_4655755_0 Belongs to the class-II aminoacyl-tRNA synthetase family K01893 GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0044424,GO:0044464 6.1.1.22 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002291 344.0
DYD2_k127_4657514_0 Involved in DNA repair and in homologous recombination. Binds and assemble on single-stranded DNA to form a nucleoprotein filament. Hydrolyzes ATP in a ssDNA-dependent manner and promotes DNA strand exchange between homologous DNA molecules K04483 GO:0000150,GO:0000217,GO:0000400,GO:0000724,GO:0000725,GO:0000730,GO:0003674,GO:0003676,GO:0003677,GO:0003690,GO:0003697,GO:0003824,GO:0005488,GO:0006139,GO:0006259,GO:0006281,GO:0006302,GO:0006310,GO:0006312,GO:0006725,GO:0006807,GO:0006950,GO:0006974,GO:0008094,GO:0008150,GO:0008152,GO:0009314,GO:0009628,GO:0009987,GO:0010212,GO:0016043,GO:0016462,GO:0016787,GO:0016817,GO:0016818,GO:0016887,GO:0017111,GO:0022607,GO:0033554,GO:0034622,GO:0034641,GO:0042148,GO:0042623,GO:0043170,GO:0043933,GO:0044085,GO:0044237,GO:0044238,GO:0044260,GO:0045003,GO:0046483,GO:0050896,GO:0051716,GO:0065003,GO:0065004,GO:0071704,GO:0071824,GO:0071840,GO:0090304,GO:0090735,GO:0097159,GO:0140097,GO:1901360,GO:1901363 - 0.00000000000000000000000000000000000000000000000000000000000000000000000002687 255.0
DYD2_k127_4657514_1 Integral membrane protein DUF92 - - - 0.0000000000000000000000000000002461 132.0
DYD2_k127_4657514_2 Dodecin K09165 - - 0.000000000000001388 79.0
DYD2_k127_4657514_3 protein conserved in archaea - - - 0.00000003143 65.0
DYD2_k127_4694267_0 CheB methylesterase K03412 - 3.1.1.61,3.5.1.44 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002534 430.0
DYD2_k127_4694267_1 Protein of unknown function (DUF3309) - - - 0.0000957 46.0
DYD2_k127_4719136_0 Catalyzes the synthesis of GMP from XMP K01951 - 6.3.5.2 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001253 385.0
DYD2_k127_4719136_1 Hemolysins and related proteins containing CBS domains - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000579 336.0
DYD2_k127_4719136_2 - - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000008437 278.0
DYD2_k127_4719136_3 Catalyzes the synthesis of GMP from XMP K01951 - 6.3.5.2 0.000000000000000000000000000000000000000000000000000000000002861 216.0
DYD2_k127_4719136_4 Thioesterase-like superfamily K07107 - - 0.0000000000000000000002018 102.0
DYD2_k127_4719136_5 Pfam:DUF1628 - - - 0.0000000000001322 84.0
DYD2_k127_4719136_6 small multi-drug export - - - 0.0007702 51.0
DYD2_k127_4724236_0 COG1226 Kef-type K transport systems - - - 0.000000000000000000000000000000000000002682 155.0
DYD2_k127_4724236_1 helicase - - - 0.00000000000000000000000000000000000001523 151.0
DYD2_k127_4762016_0 Belongs to the FPG family K10563 - 3.2.2.23,4.2.99.18 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006607 375.0
DYD2_k127_4762016_1 DNA polymerase elongation subunit (Family B) K02319 - 2.7.7.7 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000003225 317.0
DYD2_k127_4762016_2 methylamine metabolic process K03885,K15977 - 1.6.99.3 0.0000000000000000000000000000000000000009305 154.0
DYD2_k127_4762016_3 esterase of the alpha-beta hydrolase superfamily - - - 0.0000000000000000000000000000000002 143.0
DYD2_k127_4762016_4 NADP oxidoreductase coenzyme F420-dependent K06988 - 1.5.1.40 0.0000000000000000000004465 97.0
DYD2_k127_4762016_5 HxlR-like helix-turn-helix - - - 0.0000000000000000001439 93.0
DYD2_k127_4762016_6 Belongs to the SUI1 family K03113 GO:0001731,GO:0002181,GO:0002183,GO:0002188,GO:0002190,GO:0002192,GO:0003674,GO:0003676,GO:0003723,GO:0003729,GO:0003743,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006412,GO:0006413,GO:0006518,GO:0006807,GO:0008135,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0016043,GO:0019538,GO:0022607,GO:0022613,GO:0022618,GO:0032991,GO:0034622,GO:0034641,GO:0034645,GO:0043021,GO:0043022,GO:0043043,GO:0043170,GO:0043603,GO:0043604,GO:0043933,GO:0044085,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044424,GO:0044444,GO:0044464,GO:0044877,GO:0065003,GO:0070992,GO:0071704,GO:0071826,GO:0071840,GO:0097159,GO:0110017,GO:1901363,GO:1901564,GO:1901566,GO:1901576,GO:1990904 - 0.0000000000001606 81.0
DYD2_k127_4762016_7 SOS response associated peptidase (SRAP) - - - 0.000000000002008 76.0
DYD2_k127_4762016_8 Response regulator, receiver K11443 - - 0.0000000003247 66.0
DYD2_k127_4765005_0 AhpC/TSA family - - - 0.000000000000000000000000000000000000000000000000000000000000001181 229.0
DYD2_k127_4765005_1 transcriptional - - - 0.0000000000000000000006546 100.0
DYD2_k127_4765005_2 - - - - 0.00001142 51.0
DYD2_k127_4765005_3 PFAM blue (type 1) copper domain protein K00368 - 1.7.2.1 0.00005935 52.0
DYD2_k127_4772398_0 Polyketide cyclase / dehydrase and lipid transport - - - 0.00000000000002535 85.0
DYD2_k127_4772398_1 protein conserved in archaea - - - 0.000000000008841 76.0
DYD2_k127_4772398_2 DNA binding protein - - - 0.0008111 51.0
DYD2_k127_4789546_0 This protein promotes the GTP-dependent binding of aminoacyl-tRNA to the A-site of ribosomes during protein biosynthesis K03231 GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0044424,GO:0044464 - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001266 604.0
DYD2_k127_4789546_1 peptidase activity, acting on L-amino acid peptides K07004,K09955 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002428 395.0
DYD2_k127_4789546_10 Haloacid dehalogenase - - - 0.00000009954 62.0
DYD2_k127_4789546_11 Putative small multi-drug export protein - - - 0.0003939 53.0
DYD2_k127_4789546_12 domain protein - - - 0.0004649 52.0
DYD2_k127_4789546_2 ABC transporter K09695 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001031 308.0
DYD2_k127_4789546_3 PFAM ABC-2 type transporter K09694 - - 0.000000000000000000000000000000000000000000000000000000000000000006518 234.0
DYD2_k127_4789546_4 Regulatory subunit of DNA primase, an RNA polymerase that catalyzes the synthesis of short RNA molecules used as primers for DNA polymerase during DNA replication. Stabilizes and modulates the activity of the small subunit, increasing the rate of DNA synthesis, and conferring RNA synthesis capability. The DNA polymerase activity may enable DNA primase to also catalyze primer extension after primer synthesis. May also play a role in DNA repair K18882 - - 0.00000000000000000000000000000000000000000000000000000000000000002343 237.0
DYD2_k127_4789546_5 Major Facilitator Superfamily - - - 0.0000000000000000000000000000000000000000000000003781 196.0
DYD2_k127_4789546_6 Involved in the binding of tRNA to the ribosomes K02946 - - 0.00000000000000000000000000000000000000000003914 168.0
DYD2_k127_4789546_7 Catalytic subunit of DNA primase, an RNA polymerase that catalyzes the synthesis of short RNA molecules used as primers for DNA polymerase during DNA replication. The small subunit contains the primase catalytic core and has DNA synthesis activity on its own. Binding to the large subunit stabilizes and modulates the activity, increasing the rate of DNA synthesis while decreasing the length of the DNA fragments, and conferring RNA synthesis capability. The DNA polymerase activity may enable DNA primase to also catalyze primer extension after primer synthesis. May also play a role in DNA repair K02683 - - 0.00000000000000000000000000000000000000046 169.0
DYD2_k127_4789546_8 Thiamine biosynthesis protein (ThiI) K06920 - 6.3.4.20 0.00000000000000000002898 101.0
DYD2_k127_4789546_9 MscS Mechanosensitive ion channel - - - 0.00000000002461 70.0
DYD2_k127_4791239_0 Catalyzes the reduction of ribonucleotides to deoxyribonucleotides. May function to provide a pool of deoxyribonucleotide precursors for DNA repair during oxygen limitation and or for immediate growth after restoration of oxygen K00525 - 1.17.4.1 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001766 324.0
DYD2_k127_4791239_1 Signal transduction histidine kinase, subgroup 1, dimerisation phosphoacceptor domain - - - 0.00000000000000000000000001631 124.0
DYD2_k127_4847605_0 UbiA prenyltransferase family K02548 - 2.5.1.74 0.00000000000000000000000000000000000000000000000000000000000003489 223.0
DYD2_k127_4847605_1 Belongs to the FPP GGPP synthase family K02523 - 2.5.1.90 0.000000000000000000000000000000000000000000000976 178.0
DYD2_k127_4847605_2 photoreceptor activity K13924 - 2.1.1.80,3.1.1.61 0.00003463 54.0
DYD2_k127_4863618_0 Belongs to the peptidase M48B family K03799 - - 0.000000000000000000000000000000000000000000000000000000000000000000000002714 254.0
DYD2_k127_4863618_1 Glycosyl transferases group 1 - - - 0.000000000000000000000006895 115.0
DYD2_k127_4863618_2 Belongs to the CDP-alcohol phosphatidyltransferase class-I family K00995,K17884 - 2.7.8.39,2.7.8.5 0.00000000000001079 78.0
DYD2_k127_4863618_3 PRC-barrel domain - - - 0.00000000000001209 77.0
DYD2_k127_4863618_4 PFAM Glycosyl transferase family 2 K07027 - - 0.00000006674 64.0
DYD2_k127_4863618_5 glycosyl transferase, family 39 - - - 0.00000009804 65.0
DYD2_k127_487359_0 PFAM FAD-dependent pyridine nucleotide-disulphide oxidoreductase K00266 - 1.4.1.13,1.4.1.14 0.0000000000000000000000000000000000000000000000000000000000000000000006295 247.0
DYD2_k127_4881030_0 serine threonine protein kinase K12132 - 2.7.11.1 0.0000000004954 70.0
DYD2_k127_4881030_1 exo-alpha-(2->6)-sialidase activity - - - 0.0003092 49.0
DYD2_k127_4930323_0 PFAM Gamma-glutamyltranspeptidase K00681 - 2.3.2.2,3.4.19.13 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000303 489.0
DYD2_k127_4930323_1 Catalyzes the reversible interconversion of serine and glycine with a modified folate serving as the one-carbon carrier. Also exhibits a pteridine-independent aldolase activity toward beta-hydroxyamino acids, producing glycine and aldehydes, via a retro-aldol mechanism K00600 - 2.1.2.1 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001565 453.0
DYD2_k127_4930323_10 Allows the formation of correctly charged Gln-tRNA(Gln) through the transamidation of misacylated Glu-tRNA(Gln) in organisms which lack glutaminyl-tRNA synthetase. The reaction takes place in the presence of glutamine and ATP through an activated gamma-phospho-Glu-tRNA(Gln). The GatDE system is specific for glutamate and does not act on aspartate K03330 - 6.3.5.7 0.00000000001654 64.0
DYD2_k127_4930323_11 Domain of unknown function (DUF4234) - - - 0.00000000004738 68.0
DYD2_k127_4930323_12 - - - - 0.0000004941 56.0
DYD2_k127_4930323_13 cobalamin-transporting ATPase activity - - - 0.00006105 54.0
DYD2_k127_4930323_14 Universal stress protein - - - 0.00008447 54.0
DYD2_k127_4930323_15 amino acid activation for nonribosomal peptide biosynthetic process - - - 0.0006734 53.0
DYD2_k127_4930323_2 Belongs to the metallo-dependent hydrolases superfamily. DHOase family. Class I DHOase subfamily K01465 - 3.5.2.3 0.000000000000000000000000000000000000000000000000000000000000000000000000000004199 279.0
DYD2_k127_4930323_3 PFAM tRNA methyltransferase complex GCD14 subunit K07442 - 2.1.1.219,2.1.1.220 0.000000000000000000000000000000000000000000000007557 182.0
DYD2_k127_4930323_4 Cytidylyltransferase-like K00952 GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0044424,GO:0044464 2.7.7.1 0.000000000000000000000000000000000000004811 151.0
DYD2_k127_4930323_5 CDP-alcohol phosphatidyltransferase K17884 - 2.7.8.39 0.000000000000000000000000000000000002907 145.0
DYD2_k127_4930323_6 Membrane - - - 0.00000000000000000000000000000003514 135.0
DYD2_k127_4930323_7 nicotinamide-nucleotide amidase activity K03742,K03743 GO:0003674,GO:0003676,GO:0003677,GO:0005488,GO:0005575,GO:0005623,GO:0005886,GO:0006139,GO:0006259,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0009987,GO:0016020,GO:0034641,GO:0043170,GO:0044237,GO:0044238,GO:0044260,GO:0044464,GO:0046483,GO:0071704,GO:0071944,GO:0090304,GO:0097159,GO:1901360,GO:1901363 3.5.1.42 0.00000000000000000000000000002653 126.0
DYD2_k127_4930323_8 Kelch - - - 0.0000000000000000000000003259 118.0
DYD2_k127_4930323_9 Broad-specificity nucleoside monophosphate (NMP) kinase that catalyzes the reversible transfer of the terminal phosphate group between nucleoside triphosphates and monophosphates K18532 - 2.7.4.3 0.000000000000000000009719 103.0
DYD2_k127_4932715_0 PFAM Glycosyl transferase family 2 - - - 0.000000000000000000000000000000000000000000000000000000000000000000001097 263.0
DYD2_k127_4932715_1 Domain of unknown function (DUF2935) - - - 0.0000000000000000000000000000000000000000000004147 182.0
DYD2_k127_4932715_2 - - - - 0.000000002602 65.0
DYD2_k127_4932715_3 Transmembrane exosortase (Exosortase_EpsH) - - - 0.000001722 59.0
DYD2_k127_4979334_0 AMP-binding enzyme K01897 - 6.2.1.3 0.00000000000000000000000000000000000000000000000000000000000000000000000000007577 264.0
DYD2_k127_4979334_1 Acyl-CoA dehydrogenase, C-terminal domain K00248 - 1.3.8.1 0.00000000000000000000000000000000000000000000003719 181.0
DYD2_k127_4979334_2 Histidine kinase - - - 0.000000000000000000000000000000000000000004636 170.0
DYD2_k127_4979334_3 N-terminal half of MaoC dehydratase - - - 0.0001669 51.0
DYD2_k127_4986126_0 glyoxalase III activity - - - 0.0000000000000000000000000000000000000000000000000000003493 205.0
DYD2_k127_4986126_1 Transcriptional regulator - - - 0.00000000005789 70.0
DYD2_k127_4986126_2 - - - - 0.0004492 51.0
DYD2_k127_5000073_0 Belongs to the glycosyl hydrolase 8 (cellulase D) family - - - 0.0000000001623 73.0
DYD2_k127_5000073_1 protein with protein kinase and helix-hairpin-helix DNA-binding domains - - - 0.00000436 52.0
DYD2_k127_5008133_0 DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates K13798 - 2.7.7.6 5.746e-266 835.0
DYD2_k127_5008133_1 DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates K03041 GO:0000428,GO:0005575,GO:0005622,GO:0005623,GO:0030880,GO:0032991,GO:0044424,GO:0044464,GO:0061695,GO:1902494,GO:1990234 2.7.7.6 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004193 320.0
DYD2_k127_504160_0 Asparagine synthase K01953 - 6.3.5.4 0.000000000000002702 79.0
DYD2_k127_504582_0 DNA polymerase IV (family X) K02347 - - 0.00000000001306 68.0
DYD2_k127_506243_0 COG1077 Actin-like ATPase involved in cell morphogenesis - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006427 435.0
DYD2_k127_506243_1 COG1077 Actin-like ATPase involved in cell morphogenesis - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002558 340.0
DYD2_k127_506243_2 Domain of unknown function (DUF1508) - - - 0.00000000000000000000001676 114.0
DYD2_k127_506243_3 Domain of unknown function (DUF305) - - - 0.0000000000000003053 91.0
DYD2_k127_506243_4 Domain of unknown function (DUF305) - - - 0.0000000000006021 81.0
DYD2_k127_506243_5 receptor K02014 - - 0.0005063 50.0
DYD2_k127_5084552_0 epimerase - - - 0.000000000000000000095 93.0
DYD2_k127_5084552_1 translation initiation factor activity K06996 - - 0.0000000000008787 74.0
DYD2_k127_5084552_2 sigma factor antagonist activity K17752 - 2.7.11.1 0.000000002233 67.0
DYD2_k127_5089611_0 Amidase K01426 - 3.5.1.4 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000001103 312.0
DYD2_k127_5089611_1 phosphoribosyl-ATP pyrophosphohydrolase - - - 0.00000002308 63.0
DYD2_k127_5096430_0 Belongs to the PEP-utilizing enzyme family K01006 - 2.7.9.1 0.0 1112.0
DYD2_k127_5096430_1 COGs COG1529 Aerobic-type carbon monoxide dehydrogenase large subunit CoxL CutL homologs K04108 - 1.3.7.9 1.023e-205 669.0
DYD2_k127_5096430_10 PFAM isocitrate isopropylmalate dehydrogenase K05824 - 1.1.1.87 0.000000000000000000000000000000000000000000000000000000000000000000000805 256.0
DYD2_k127_5096430_11 CO dehydrogenase flavoprotein C-terminal domain K04109 - 1.3.7.9 0.000000000000000000000000000000000000000000000000000000003952 219.0
DYD2_k127_5096430_12 snoRNA binding domain, fibrillarin K14564 GO:0000154,GO:0003674,GO:0003676,GO:0003723,GO:0005488,GO:0006139,GO:0006364,GO:0006396,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0009451,GO:0009987,GO:0010467,GO:0016070,GO:0016072,GO:0022613,GO:0030515,GO:0034470,GO:0034641,GO:0034660,GO:0042254,GO:0043170,GO:0043412,GO:0044085,GO:0044237,GO:0044238,GO:0046483,GO:0071704,GO:0071840,GO:0090304,GO:0097159,GO:1901360,GO:1901363 - 0.00000000000000000000000000000000000000000000000000000003066 215.0
DYD2_k127_5096430_13 [2Fe-2S] binding domain K03518 - 1.2.5.3 0.0000000000000000000000000000000000000000000000000000003528 198.0
DYD2_k127_5096430_14 Involved in pre-rRNA and tRNA processing. Utilizes the methyl donor S-adenosyl-L-methionine to catalyze the site-specific 2'-hydroxyl methylation of ribose moieties in rRNA and tRNA. Site specificity is provided by a guide RNA that base pairs with the substrate. Methylation occurs at a characteristic distance from the sequence involved in base pairing with the guide RNA K04795 - - 0.000000000000000000000000000000000000000000000000000005792 197.0
DYD2_k127_5096430_15 Phosphotransferase enzyme family - - - 0.000000000000000000000000000000000000000000000000004945 194.0
DYD2_k127_5096430_16 Catalyzes the isomerization between 2-isopropylmalate and 3-isopropylmalate, via the formation of 2-isopropylmaleate K01704 - 4.2.1.33,4.2.1.35 0.000000000000000000000000000000000000000000000002791 182.0
DYD2_k127_5096430_17 Phosphatidylethanolamine-binding protein K06910 - - 0.000000000000000000000000000000000000000000001147 169.0
DYD2_k127_5096430_18 Catalyzes the condensation of 2 ATP molecules into cyclic di-AMP (c-di-AMP), a - - - 0.0000000000000000000000000000000000000000001266 170.0
DYD2_k127_5096430_19 XdhC Rossmann domain K07402 - - 0.000000000000000000000000000000000000007696 159.0
DYD2_k127_5096430_2 Catalyzes the isomerization between 2-isopropylmalate and 3-isopropylmalate, via the formation of 2-isopropylmaleate K01703,K16792 - 4.2.1.114,4.2.1.33,4.2.1.35 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001017 482.0
DYD2_k127_5096430_20 Catalyzes the hydroxylation of the N(6)-(4-aminobutyl)- L-lysine intermediate to form hypusine, an essential post- translational modification only found in mature eIF-5A factor K06072,K08187 GO:0000226,GO:0003674,GO:0003824,GO:0004497,GO:0005488,GO:0005506,GO:0005575,GO:0005622,GO:0005623,GO:0005634,GO:0005737,GO:0005783,GO:0005789,GO:0005829,GO:0006417,GO:0006464,GO:0006807,GO:0006996,GO:0007010,GO:0007017,GO:0008150,GO:0008152,GO:0008283,GO:0008612,GO:0009058,GO:0009268,GO:0009628,GO:0009889,GO:0009893,GO:0009894,GO:0009896,GO:0009987,GO:0010467,GO:0010468,GO:0010506,GO:0010508,GO:0010556,GO:0010608,GO:0012505,GO:0016020,GO:0016043,GO:0016491,GO:0016705,GO:0018193,GO:0018205,GO:0019135,GO:0019222,GO:0019538,GO:0030447,GO:0031323,GO:0031325,GO:0031326,GO:0031329,GO:0031331,GO:0031984,GO:0032268,GO:0034248,GO:0036176,GO:0036177,GO:0036178,GO:0036211,GO:0040007,GO:0042175,GO:0042710,GO:0043167,GO:0043169,GO:0043170,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0043412,GO:0044010,GO:0044011,GO:0044182,GO:0044237,GO:0044238,GO:0044260,GO:0044267,GO:0044422,GO:0044424,GO:0044425,GO:0044432,GO:0044444,GO:0044446,GO:0044464,GO:0044764,GO:0046872,GO:0046914,GO:0048037,GO:0048518,GO:0048522,GO:0050789,GO:0050794,GO:0050896,GO:0051171,GO:0051246,GO:0051604,GO:0051703,GO:0051704,GO:0055114,GO:0060255,GO:0065007,GO:0071704,GO:0071840,GO:0080090,GO:0090605,GO:0090609,GO:0098827,GO:1901564,GO:2000112,GO:2000765 1.14.99.29 0.00000000000000000000000000000006002 130.0
DYD2_k127_5096430_21 Phospholipid methyltransferase K16168 - - 0.00000000000000000000002478 106.0
DYD2_k127_5096430_22 Cytidylyltransferase K07141 - 2.7.7.76 0.00000000000000000000004489 108.0
DYD2_k127_5096430_24 PFAM Endoribonuclease L-PSP - - - 0.000000000000000000005434 94.0
DYD2_k127_5096430_25 His Kinase A (phosphoacceptor) domain - - - 0.00000000000000000004359 101.0
DYD2_k127_5096430_26 Thiamine-binding protein - - - 0.0000000000000002151 82.0
DYD2_k127_5096430_27 protein conserved in archaea - - - 0.0000000000242 72.0
DYD2_k127_5096430_28 membrane - - - 0.000000002667 67.0
DYD2_k127_5096430_29 Acetyltransferase (GNAT) domain - - - 0.0000001381 63.0
DYD2_k127_5096430_3 Threonine aldolase K01620 - 4.1.2.48 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000218 362.0
DYD2_k127_5096430_30 Putative small multi-drug export protein - - - 0.0000003694 62.0
DYD2_k127_5096430_31 DNA binding protein - - - 0.000004523 57.0
DYD2_k127_5096430_32 LVIVD repeat - - - 0.000008841 58.0
DYD2_k127_5096430_33 membrane - - - 0.00004291 53.0
DYD2_k127_5096430_34 cell wall anchor domain - - - 0.00006316 54.0
DYD2_k127_5096430_36 Bacterial PH domain - - - 0.0008226 51.0
DYD2_k127_5096430_4 Belongs to the RimK family K05844,K14940 - 6.3.2.32 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000046 332.0
DYD2_k127_5096430_5 succinate dehydrogenase subunit K06987 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000004303 307.0
DYD2_k127_5096430_6 Catalyzes the conversion of dihydroorotate to orotate K00254,K17828 GO:0003674,GO:0003824,GO:0004152,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006139,GO:0006206,GO:0006207,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009112,GO:0009987,GO:0016491,GO:0016627,GO:0016635,GO:0018130,GO:0019856,GO:0034641,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0044424,GO:0044464,GO:0046112,GO:0046483,GO:0055086,GO:0055114,GO:0071704,GO:0072527,GO:0072528,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576 1.3.1.14,1.3.5.2 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000001389 290.0
DYD2_k127_5096430_7 synthase K16167 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000002506 290.0
DYD2_k127_5096430_8 COG0733 Na -dependent transporters of the SNF family K03308 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000003474 270.0
DYD2_k127_5096430_9 Fumarylacetoacetate (FAA) hydrolase family K01826 - 5.3.3.10 0.0000000000000000000000000000000000000000000000000000000000000000000000005496 260.0
DYD2_k127_5101677_0 Zinc phosphodiesterase, which displays some tRNA 3'- processing endonuclease activity. Probably involved in tRNA maturation, by removing a 3'-trailer from precursor tRNA K00784 - 3.1.26.11 0.000000000000000000000000000000000000000000000000000000000000000000000000000233 266.0
DYD2_k127_5101677_1 Catalyzes the addition and repair of the essential 3'- terminal CCA sequence in tRNAs without using a nucleic acid template. Adds these three nucleotides in the order of C, C, and A to the tRNA nucleotide-73, using CTP and ATP as substrates and producing inorganic pyrophosphate K07558 - 2.7.7.72 0.000000000000000000000000000000000000000000000000000000000000000000000009797 259.0
DYD2_k127_5101677_2 EamA-like transporter family - - - 0.00000000000000000000000000000000000000000000000000839 193.0
DYD2_k127_5101677_3 cytidine and deoxycytidylate deaminase zinc-binding region K01493 - 3.5.4.12 0.0000000000000000000000000000000000000000000000005455 184.0
DYD2_k127_5101677_4 Pfam:Methyltransf_26 K07446 GO:0000049,GO:0001510,GO:0003674,GO:0003676,GO:0003723,GO:0003824,GO:0004809,GO:0005488,GO:0006139,GO:0006396,GO:0006399,GO:0006400,GO:0006725,GO:0006807,GO:0008033,GO:0008150,GO:0008152,GO:0008168,GO:0008170,GO:0008173,GO:0008175,GO:0008757,GO:0009451,GO:0009987,GO:0010467,GO:0016070,GO:0016423,GO:0016740,GO:0016741,GO:0030488,GO:0032259,GO:0034470,GO:0034641,GO:0034660,GO:0043170,GO:0043412,GO:0043414,GO:0044237,GO:0044238,GO:0044260,GO:0046483,GO:0071704,GO:0090304,GO:0097159,GO:0140098,GO:0140101,GO:1901360,GO:1901363 2.1.1.213 0.000000000000000000000000000000000000000001888 169.0
DYD2_k127_5101677_5 adenyl ribonucleotide binding - - - 0.000000000000000000000000000000000000003042 153.0
DYD2_k127_5101677_6 PFAM Xylose isomerase domain protein TIM barrel - - - 0.0000000000000000000000000000000002443 142.0
DYD2_k127_5101677_7 RNA binding K09736 - - 0.000000000000005877 83.0
DYD2_k127_5115557_0 TIGRFAM drug resistance transporter, EmrB QacA subfamily - - - 0.00003285 55.0
DYD2_k127_5115557_1 LVIVD repeat - - - 0.0001423 54.0
DYD2_k127_5131917_0 Integral membrane protein TerC family - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003378 323.0
DYD2_k127_5131917_1 Peptidase dimerisation domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000006284 251.0
DYD2_k127_5131917_2 Acetyltransferase (GNAT) domain - - - 0.0000000000000000000000000000000000000000006355 164.0
DYD2_k127_5131917_3 Domain of unknown function (DU1801) - - - 0.000000000000000000000000000000267 128.0
DYD2_k127_5131917_4 SWIB/MDM2 domain - - - 0.00000000000000000000002266 101.0
DYD2_k127_5182230_0 Releases the supercoiling and torsional tension of DNA, which is introduced during the DNA replication and transcription, by transiently cleaving and rejoining one strand of the DNA duplex. Introduces a single-strand break via transesterification at a target site in duplex DNA. The scissile phosphodiester is attacked by the catalytic tyrosine of the enzyme, resulting in the formation of a DNA-(5'-phosphotyrosyl)-enzyme intermediate and the expulsion of a 3'-OH DNA strand. The free DNA strand then undergoes passage around the unbroken strand, thus removing DNA supercoils. Finally, in the religation step, the DNA 3'-OH attacks the covalent intermediate to expel the active-site tyrosine and restore the DNA phosphodiester backbone K03168 - 5.99.1.2 1.292e-282 892.0
DYD2_k127_5182230_1 Di- and tricarboxylate transporters - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004017 427.0
DYD2_k127_5182230_10 S-adenosyl-L-methionine-dependent transferase that acts as a component of the wyosine derivatives biosynthesis pathway. Catalyzes the transfer of the alpha-amino-alpha-carboxypropyl (acp) group from S-adenosyl-L-methionine to 4-demethylwyosine (imG-14), forming 7-aminocarboxypropyl-demethylwyosine (wybutosine-86) at position 37 of tRNA(Phe) K07055 - 2.5.1.114 0.00000000000000000000000000000000000000000000000000005385 209.0
DYD2_k127_5182230_11 Quinolinate phosphoribosyl transferase, C-terminal domain K00767 - 2.4.2.19 0.0000000000000000000000000000000000000000000000000008223 198.0
DYD2_k127_5182230_12 pre-rRNA processing protein involved in ribosome biogenesis K09140 - - 0.000000000000000000000000000000000000000319 159.0
DYD2_k127_5182230_13 PPIases accelerate the folding of proteins. It catalyzes the cis-trans isomerization of proline imidic peptide bonds in oligopeptides K03768 - 5.2.1.8 0.00000000000000000000000000008909 126.0
DYD2_k127_5182230_14 Belongs to the short-chain dehydrogenases reductases (SDR) family - - - 0.000000000000000000000000002501 121.0
DYD2_k127_5182230_15 BNR repeat-like domain - - - 0.00000000000000000000000001459 126.0
DYD2_k127_5182230_16 exo-alpha-(2->6)-sialidase activity - - - 0.0000000000000000000000001798 123.0
DYD2_k127_5182230_17 Important for reducing fluoride concentration in the cell, thus reducing its toxicity K06199 - - 0.000000000000000001713 90.0
DYD2_k127_5182230_18 - - - - 0.0000000000000002247 91.0
DYD2_k127_5182230_19 Belongs to the eukaryotic ribosomal protein eL40 family K02927 - - 0.000000000002633 70.0
DYD2_k127_5182230_2 TIGRFAM chromate transporter, chromate ion transporter (CHR) family K07240 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001243 374.0
DYD2_k127_5182230_20 - - - - 0.00000000000415 70.0
DYD2_k127_5182230_21 - - - - 0.000000009845 66.0
DYD2_k127_5182230_22 ACT domain K09707 - - 0.0000003124 58.0
DYD2_k127_5182230_23 TonB dependent receptor K02014,K16087 - - 0.0000148 57.0
DYD2_k127_5182230_24 - - - - 0.00004146 55.0
DYD2_k127_5182230_25 DNA binding protein - - - 0.00005882 53.0
DYD2_k127_5182230_26 - - - - 0.000172 49.0
DYD2_k127_5182230_27 ribosomal small subunit binding - - - 0.0002586 53.0
DYD2_k127_5182230_3 Fibronectin-binding protein A N-terminus (FbpA) - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001589 340.0
DYD2_k127_5182230_4 HupE / UreJ protein - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000002857 306.0
DYD2_k127_5182230_5 May function in recognizing stalled ribosomes, interact with stem-loop structures in stalled mRNA molecules, and effect endonucleolytic cleavage of the mRNA. May play a role in the release non-functional ribosomes and degradation of damaged mRNAs. Has endoribonuclease activity K06965 - - 0.000000000000000000000000000000000000000000000000000000000000001974 237.0
DYD2_k127_5182230_6 TIGRFAM phenazine biosynthesis protein PhzF family - - - 0.0000000000000000000000000000000000000000000000000000000000003948 220.0
DYD2_k127_5182230_7 EamA-like transporter family - - - 0.000000000000000000000000000000000000000000000000000000000000516 220.0
DYD2_k127_5182230_8 Catalyzes the methyl esterification of L-isoaspartyl residues in peptides and proteins that result from spontaneous decomposition of normal L-aspartyl and L-asparaginyl residues. It plays a role in the repair and or degradation of damaged proteins K00573 - 2.1.1.77 0.0000000000000000000000000000000000000000000000000000000001144 211.0
DYD2_k127_5182230_9 histidine kinase A domain protein - - - 0.00000000000000000000000000000000000000000000000000000003531 221.0
DYD2_k127_5217366_0 Amidase K01426 - 3.5.1.4 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001044 355.0
DYD2_k127_5217366_1 tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase activity K00303 - 1.5.3.1 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001192 339.0
DYD2_k127_5217366_2 FAD dependent oxidoreductase - - - 0.000000000000000000000000000000000000000000000000000000000000000000001318 246.0
DYD2_k127_5217366_3 Pyridoxal-phosphate dependent enzyme - - - 0.0000000000000000000000000000000000000000000000000000000000000221 227.0
DYD2_k127_5217366_4 Major facilitator Superfamily - - - 0.000000000000000000000000000000000009926 152.0
DYD2_k127_5217366_5 3-demethylubiquinone-9 3-O-methyltransferase activity K03428 - 2.1.1.11 0.000000000000000000000000003832 119.0
DYD2_k127_5217366_6 PFAM Endoribonuclease L-PSP - - - 0.0000000000000000000002934 107.0
DYD2_k127_5217366_7 Carboxypeptidase regulatory-like domain - - - 0.000443 52.0
DYD2_k127_5271073_0 Thiolase, N-terminal domain K00626 - 2.3.1.9 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004636 434.0
DYD2_k127_5271073_1 nucleic-acid-binding protein containing a Zn-ribbon K07068 - - 0.000000000000009683 81.0
DYD2_k127_5279077_0 Chlorophyllase K01061 - 3.1.1.45 0.00000000000000000000000000000000000000000000000000000000000000005955 236.0
DYD2_k127_5279077_1 Pfam Secreted repeat of - - - 0.000000000000000000000000000947 126.0
DYD2_k127_5279077_2 response to oxidative stress K04063 - - 0.00000000000000000000000001007 115.0
DYD2_k127_5279077_3 HD domain - - - 0.000000000000009225 78.0
DYD2_k127_5293757_0 May play a key role in the regulation of the intracellular concentration of adenosylhomocysteine K01251 GO:0000096,GO:0003674,GO:0003824,GO:0004013,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006082,GO:0006139,GO:0006520,GO:0006534,GO:0006555,GO:0006575,GO:0006725,GO:0006732,GO:0006790,GO:0006807,GO:0008150,GO:0008152,GO:0009066,GO:0009069,GO:0009116,GO:0009119,GO:0009987,GO:0016787,GO:0016801,GO:0016802,GO:0017144,GO:0019752,GO:0033353,GO:0034641,GO:0042278,GO:0043436,GO:0044237,GO:0044238,GO:0044281,GO:0044424,GO:0044444,GO:0044464,GO:0046128,GO:0046439,GO:0046483,GO:0046498,GO:0046500,GO:0051186,GO:0055086,GO:0071704,GO:0072521,GO:1901135,GO:1901360,GO:1901564,GO:1901605,GO:1901657 3.3.1.1 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001952 434.0
DYD2_k127_5293757_1 Catalyzes the NAD-dependent oxidative cleavage of spermidine and the subsequent transfer of the butylamine moiety of spermidine to the epsilon-amino group of a specific lysine residue of the eIF-5A precursor protein to form the intermediate deoxyhypusine residue K00809 - 2.5.1.46 0.0000000000000000000000000000000000000000000000000000005326 201.0
DYD2_k127_5293757_2 pfkB family carbohydrate kinase K22026 GO:0000287,GO:0003674,GO:0003824,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005975,GO:0006139,GO:0006725,GO:0006753,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0008906,GO:0009058,GO:0009117,GO:0009165,GO:0009987,GO:0016301,GO:0016310,GO:0016740,GO:0016772,GO:0016773,GO:0018130,GO:0019200,GO:0019205,GO:0019206,GO:0019438,GO:0019637,GO:0034641,GO:0034654,GO:0043167,GO:0043169,GO:0044237,GO:0044238,GO:0044249,GO:0044262,GO:0044271,GO:0044281,GO:0044424,GO:0044464,GO:0046483,GO:0046835,GO:0046872,GO:0055086,GO:0071704,GO:0090407,GO:1901293,GO:1901360,GO:1901362,GO:1901576 2.7.1.213,2.7.1.73 0.000000000000215 79.0
DYD2_k127_531937_0 FAD linked oxidases, C-terminal domain K00803 - 2.5.1.26 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000003988 304.0
DYD2_k127_531937_1 Natural resistance-associated macrophage protein - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000001276 289.0
DYD2_k127_531937_2 N-methylhydantoinase A acetone carboxylase, beta subunit K01473 - 3.5.2.14 0.0000000000000000000000000000000000000000001273 176.0
DYD2_k127_5335587_0 PFAM carboxyl transferase K01966 - 2.1.3.15,6.4.1.3 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000152 463.0
DYD2_k127_5335587_1 HxlR-like helix-turn-helix - - - 0.000000000000000000000001652 109.0
DYD2_k127_5335587_2 - - - - 0.0006768 52.0
DYD2_k127_5338039_0 Endonuclease that specifically degrades the RNA of RNA- DNA hybrids K03470 GO:0003674,GO:0003824,GO:0004518,GO:0004519,GO:0004521,GO:0004523,GO:0004540,GO:0005575,GO:0005622,GO:0005623,GO:0006139,GO:0006259,GO:0006260,GO:0006261,GO:0006271,GO:0006273,GO:0006281,GO:0006298,GO:0006401,GO:0006725,GO:0006807,GO:0006950,GO:0006974,GO:0008150,GO:0008152,GO:0009056,GO:0009057,GO:0009058,GO:0009059,GO:0009987,GO:0016070,GO:0016787,GO:0016788,GO:0016891,GO:0016893,GO:0019439,GO:0022616,GO:0032299,GO:0032991,GO:0033554,GO:0033567,GO:0034641,GO:0034645,GO:0034655,GO:0043137,GO:0043170,GO:0044237,GO:0044238,GO:0044248,GO:0044249,GO:0044260,GO:0044265,GO:0044270,GO:0044424,GO:0044464,GO:0046483,GO:0046700,GO:0050896,GO:0051716,GO:0071704,GO:0090304,GO:0090305,GO:0090501,GO:0090502,GO:0140098,GO:1901360,GO:1901361,GO:1901575,GO:1901576 3.1.26.4 0.00000000000000000000000000000000000000000000000002196 187.0
DYD2_k127_5338039_1 Archaeal holliday junction resolvase (hjc) - - - 0.000000000000000000000000000000000000000000000001994 181.0
DYD2_k127_5338039_2 Required for replicative DNA synthesis. This DNA polymerase also exhibits 3' to 5' exonuclease activity K02342,K03763 - 2.7.7.7 0.000000000000000000000000000006561 126.0
DYD2_k127_5347450_0 carbamoyl-phosphate synthase (glutamine-hydrolyzing) activity K01955 - 6.3.5.5 0.0 1234.0
DYD2_k127_5347450_1 Belongs to the CarA family K01956 - 6.3.5.5 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002926 374.0
DYD2_k127_5347450_2 Formation of pseudouridine at positions 38, 39 and 40 in the anticodon stem and loop of transfer RNAs K06173 GO:0001522,GO:0003674,GO:0003824,GO:0006139,GO:0006396,GO:0006399,GO:0006400,GO:0006725,GO:0006807,GO:0008033,GO:0008150,GO:0008152,GO:0009451,GO:0009982,GO:0009987,GO:0010467,GO:0016070,GO:0016853,GO:0016866,GO:0031119,GO:0034470,GO:0034641,GO:0034660,GO:0043170,GO:0043412,GO:0044237,GO:0044238,GO:0046483,GO:0071704,GO:0090304,GO:1901360 5.4.99.12 0.000000000000000000000000000000000002818 144.0
DYD2_k127_5347450_3 Belongs to the UPF0434 family - - - 0.000000000000006514 80.0
DYD2_k127_5347450_4 phytol kinase 1 K18678 GO:0003674,GO:0003824,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006766,GO:0006775,GO:0006793,GO:0006796,GO:0008150,GO:0008152,GO:0009058,GO:0009110,GO:0009507,GO:0009536,GO:0009987,GO:0010189,GO:0010276,GO:0016301,GO:0016310,GO:0016740,GO:0016772,GO:0018130,GO:0042360,GO:0042362,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0044237,GO:0044249,GO:0044281,GO:0044283,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0071704,GO:1901360,GO:1901362,GO:1901576,GO:1901615,GO:1901617 2.7.1.182 0.0000001069 63.0
DYD2_k127_5370812_0 Involved in regulation of DNA replication K10725 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000114 259.0
DYD2_k127_5370812_1 PAS domain containing protein - - - 0.0000000000000000000000000000000000000000000000000000004475 207.0
DYD2_k127_5370812_2 X-Pro dipeptidyl-peptidase C-terminal non-catalytic domain - - - 0.00000000000000000000000000000000000000000000000003255 200.0
DYD2_k127_5370812_3 DsrE/DsrF/DrsH-like family - - - 0.0000000000000000000000000000000000000001211 165.0
DYD2_k127_5370812_4 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase - - - 0.00000000000000000000003926 112.0
DYD2_k127_5370812_5 sulfur carrier activity K04085 GO:0008150,GO:0009987,GO:0019725,GO:0042592,GO:0048878,GO:0055082,GO:0065007,GO:0065008 - 0.0000000000000008453 84.0
DYD2_k127_5382613_0 Belongs to the class-I aminoacyl-tRNA synthetase family K01869 GO:0003674,GO:0003824,GO:0004812,GO:0004823,GO:0004832,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006082,GO:0006139,GO:0006399,GO:0006412,GO:0006418,GO:0006429,GO:0006438,GO:0006518,GO:0006520,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0016070,GO:0016874,GO:0016875,GO:0019538,GO:0019752,GO:0034641,GO:0034645,GO:0034660,GO:0043038,GO:0043039,GO:0043043,GO:0043170,GO:0043436,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044281,GO:0044424,GO:0044464,GO:0046483,GO:0071704,GO:0090304,GO:0140098,GO:0140101,GO:1901360,GO:1901564,GO:1901566,GO:1901576 6.1.1.4 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002145 483.0
DYD2_k127_5382613_1 Belongs to the class-II aminoacyl-tRNA synthetase family K01892 - 6.1.1.21 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002056 334.0
DYD2_k127_5382613_2 R3H domain protein K06346 - - 0.0001043 51.0
DYD2_k127_5423217_0 Amidohydrolase K07045 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000005334 258.0
DYD2_k127_5423217_1 Phenazine biosynthesis-like protein K06998 - 5.3.3.17 0.0000000000000000000000000000000000000000000000000000009072 209.0
DYD2_k127_5423217_2 Acetyltransferase (GNAT) family - - - 0.00000000000000000000000000000000000000000000001119 178.0
DYD2_k127_5423217_3 X-Pro dipeptidyl-peptidase C-terminal non-catalytic domain - - - 0.0000000000000000000000000000000000000000000007772 188.0
DYD2_k127_5423217_4 Putative RNA-binding Domain in PseudoUridine synthase and Archaeosine transglycosylase K07575 GO:0001731,GO:0002181,GO:0002183,GO:0002188,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0006412,GO:0006413,GO:0006518,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0015935,GO:0016043,GO:0019538,GO:0022607,GO:0022613,GO:0022618,GO:0022626,GO:0022627,GO:0032991,GO:0034622,GO:0034641,GO:0034645,GO:0043043,GO:0043170,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043603,GO:0043604,GO:0043933,GO:0044085,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:0065003,GO:0071704,GO:0071826,GO:0071840,GO:1901564,GO:1901566,GO:1901576,GO:1990904 - 0.0000000000000000000000000000000000000000001019 169.0
DYD2_k127_5423217_5 PFAM Like-Sm ribonucleoprotein, core K04796 - - 0.00000000000000000001659 93.0
DYD2_k127_5423217_6 rRNA binding K00128,K02922,K06269,K07891,K09557 GO:0000184,GO:0000448,GO:0000460,GO:0000463,GO:0000466,GO:0000469,GO:0000470,GO:0000478,GO:0000479,GO:0000956,GO:0002181,GO:0003674,GO:0003676,GO:0003723,GO:0003729,GO:0003735,GO:0005198,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0006139,GO:0006364,GO:0006396,GO:0006401,GO:0006402,GO:0006412,GO:0006413,GO:0006518,GO:0006605,GO:0006612,GO:0006613,GO:0006614,GO:0006725,GO:0006807,GO:0006810,GO:0006886,GO:0008104,GO:0008150,GO:0008152,GO:0008270,GO:0009056,GO:0009057,GO:0009058,GO:0009059,GO:0009892,GO:0009987,GO:0010467,GO:0010468,GO:0010605,GO:0010629,GO:0015031,GO:0015833,GO:0015934,GO:0016070,GO:0016071,GO:0016072,GO:0019222,GO:0019439,GO:0019538,GO:0019838,GO:0019843,GO:0022613,GO:0022625,GO:0022626,GO:0030684,GO:0030687,GO:0032991,GO:0033036,GO:0033365,GO:0034470,GO:0034613,GO:0034641,GO:0034645,GO:0034655,GO:0034660,GO:0042254,GO:0042273,GO:0042886,GO:0043043,GO:0043167,GO:0043169,GO:0043170,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043603,GO:0043604,GO:0044085,GO:0044237,GO:0044238,GO:0044248,GO:0044249,GO:0044260,GO:0044265,GO:0044267,GO:0044270,GO:0044271,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:0045047,GO:0045184,GO:0046483,GO:0046700,GO:0046872,GO:0046907,GO:0046914,GO:0048519,GO:0050789,GO:0051179,GO:0051234,GO:0051641,GO:0051649,GO:0060255,GO:0065007,GO:0070727,GO:0070972,GO:0071702,GO:0071704,GO:0071705,GO:0071840,GO:0072594,GO:0072599,GO:0072657,GO:0090150,GO:0090304,GO:0090305,GO:0090501,GO:0090502,GO:0097159,GO:1901360,GO:1901361,GO:1901363,GO:1901564,GO:1901566,GO:1901575,GO:1901576,GO:1990904 1.2.1.3,3.1.3.16 0.00000000000002891 74.0
DYD2_k127_5423217_7 RNA polymerase subunit 9 K03057 - - 0.0000000008038 67.0
DYD2_k127_5423217_8 BNR repeat-like domain - - - 0.0000005466 62.0
DYD2_k127_5471221_0 Catalyzes the formation of phosphoribosylamine from phosphoribosylpyrophosphate (PRPP) and glutamine K00764 - 2.4.2.14 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003436 385.0
DYD2_k127_5471221_1 Bacterio-opsin activator HTH domain protein - - - 0.00000003053 63.0
DYD2_k127_5471221_2 PFAM regulatory protein LuxR - - - 0.000002197 54.0
DYD2_k127_5491147_0 Alpha-amylase domain K05343 - 3.2.1.1,5.4.99.16 0.0 1341.0
DYD2_k127_5491147_1 Catalyzes the formation of the alpha-1,6-glucosidic linkages in glycogen by scission of a 1,4-alpha-linked oligosaccharide from growing alpha-1,4-glucan chains and the subsequent attachment of the oligosaccharide to the alpha-1,6 position K00700 - 2.4.1.18 2.495e-296 923.0
DYD2_k127_5491147_10 dUTPase K01494 - 3.5.4.13 0.00000000000000000000000000000000000000000002861 168.0
DYD2_k127_5491147_11 Domain in cystathionine beta-synthase and other proteins. - - - 0.0000000000000000000000000000000000000002427 166.0
DYD2_k127_5491147_12 helix_turn_helix, Arsenical Resistance Operon Repressor - - - 0.00000000000000000000000000000004142 136.0
DYD2_k127_5491147_13 Putative zinc- or iron-chelating domain K06940 - - 0.000000000000000000000000009298 113.0
DYD2_k127_5491147_14 DNA binding protein - - - 0.00000005193 63.0
DYD2_k127_5491147_2 Belongs to the glycosyl hydrolase 57 family - - - 9.051e-286 899.0
DYD2_k127_5491147_3 Maltosyltransferase that uses maltose 1-phosphate (M1P) as the sugar donor to elongate linear or branched alpha-(1- 4)- glucans. Is involved in a branched alpha-glucan biosynthetic pathway from trehalose, together with TreS, Mak and GlgB K16147 - 2.4.99.16 1.69e-255 814.0
DYD2_k127_5491147_4 Function in general translation initiation by promoting the binding of the formylmethionine-tRNA to ribosomes. Seems to function along with eIF-2 K03243 - - 9.644e-198 634.0
DYD2_k127_5491147_5 Domain of unknown function (DUF3459) K00700,K01236 - 2.4.1.18,3.2.1.141 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001279 610.0
DYD2_k127_5491147_6 4-alpha-glucanotransferase K00705 - 2.4.1.25 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002966 514.0
DYD2_k127_5491147_7 Catalyzes the isomerization between 2-isopropylmalate and 3-isopropylmalate, via the formation of 2-isopropylmaleate K01703 - 4.2.1.33,4.2.1.35 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004502 409.0
DYD2_k127_5491147_8 PFAM Glycosyl transferase, family 20 K00697,K16055 - 2.4.1.15,2.4.1.347,3.1.3.12 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001172 314.0
DYD2_k127_5491147_9 Conserved hypothetical protein 698 - - - 0.0000000000000000000000000000000000000000000000000000000000000006212 231.0
DYD2_k127_5494278_0 Repeats in polycystic kidney disease 1 (PKD1) and other proteins - - - 0.0000000000000000000000000000000000000000000000009795 201.0
DYD2_k127_5503881_0 N-methylhydantoinase B acetone carboxylase, alpha subunit K01474 - 3.5.2.14 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007575 497.0
DYD2_k127_5503881_1 Helix-hairpin-helix domain K02347 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001017 449.0
DYD2_k127_5503881_2 Hydantoinase/oxoprolinase N-terminal region K01469,K01473 - 3.5.2.14,3.5.2.9 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002177 376.0
DYD2_k127_5503881_3 hydrolases or acyltransferases (alpha beta hydrolase superfamily) - - - 0.00000000000000000000000000000000000003413 153.0
DYD2_k127_5503881_4 exo-alpha-(2->6)-sialidase activity - - - 0.000000000000000000000000000000005157 144.0
DYD2_k127_5503881_5 Tonb-dependent siderophore receptor K02014 - - 0.00002194 56.0
DYD2_k127_5507337_0 Transport of potassium into the cell K03549 GO:0003674,GO:0005215,GO:0005575,GO:0006810,GO:0006811,GO:0006812,GO:0006813,GO:0008150,GO:0008324,GO:0009987,GO:0015075,GO:0015077,GO:0015079,GO:0015318,GO:0015672,GO:0016020,GO:0022857,GO:0022890,GO:0030001,GO:0034220,GO:0046873,GO:0051179,GO:0051234,GO:0055085,GO:0071804,GO:0071805,GO:0098655,GO:0098660,GO:0098662 - 1.623e-213 681.0
DYD2_k127_5507337_1 X-Pro dipeptidyl-peptidase C-terminal non-catalytic domain - - - 0.000000000000000000000000000000000000000000003355 181.0
DYD2_k127_5507337_2 PFAM oxidoreductase, molybdopterin binding - - - 0.00000000000000000000000002198 122.0
DYD2_k127_5507337_3 LVIVD repeat - - - 0.0000000000000000000000001349 121.0
DYD2_k127_5507337_4 MOSC domain - - - 0.0000000000000000000004279 103.0
DYD2_k127_5507337_5 PFAM Cupin 2 conserved barrel domain protein - - - 0.0000000000000000003253 94.0
DYD2_k127_5507337_6 Histone-like DNA-binding protein which is capable of wrapping DNA to stabilize it, and thus to prevent its denaturation under extreme environmental conditions K03530 - - 0.000000000000000832 80.0
DYD2_k127_5507337_7 Winged helix-turn-helix DNA-binding - - - 0.000000000002298 78.0
DYD2_k127_5507337_8 Winged helix-turn-helix DNA-binding - - - 0.000000000003353 80.0
DYD2_k127_5507337_9 Winged helix-turn-helix DNA-binding - - - 0.000000000003487 80.0
DYD2_k127_5509298_0 COG1249 Pyruvate 2-oxoglutarate dehydrogenase complex, dihydrolipoamide dehydrogenase (E3) component, and related enzymes K00382 GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0044424,GO:0044464 1.8.1.4 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002773 448.0
DYD2_k127_5509298_1 MFS/sugar transport protein - - - 0.000000000000000000000000000000000000000000000000000000000000000000000003438 258.0
DYD2_k127_5509298_2 PFAM phospholipid glycerol acyltransferase - - - 0.00000000000000000000000000000000000000000000000004607 192.0
DYD2_k127_5509298_3 COG0697 Permeases of the drug metabolite transporter (DMT) superfamily - - - 0.0000000000000000000000000000000000000000000002187 182.0
DYD2_k127_5509298_4 - - - - 0.00000000000000000006866 98.0
DYD2_k127_5509298_5 Hydrolyzes RNA 2',3'-cyclic phosphodiester to an RNA 2'- phosphomonoester K01975 - 3.1.4.58 0.000000000006371 69.0
DYD2_k127_5509298_6 COG0723 Rieske Fe-S protein - - - 0.00000001832 64.0
DYD2_k127_5509298_7 TonB-dependent receptor plug domain protein - - - 0.000007447 57.0
DYD2_k127_5521420_0 Metallopeptidase family M24 K01271 - 3.4.13.9 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000002083 309.0
DYD2_k127_5521420_1 Tripartite tricarboxylate transporter TctA family K08971 - - 0.000000000000000000000000000000000000000000004351 182.0
DYD2_k127_5521420_2 Repeats in polycystic kidney disease 1 (PKD1) and other proteins - - - 0.000000002654 68.0
DYD2_k127_5521420_3 transport - - - 0.000000007173 67.0
DYD2_k127_5521420_4 Uncharacterized protein conserved in archaea (DUF2240) - - - 0.0006818 51.0
DYD2_k127_5552454_0 PFAM short-chain dehydrogenase reductase SDR K15314 - - 0.0 1499.0
DYD2_k127_5552454_1 PFAM carboxyl transferase K01966 - 2.1.3.15,6.4.1.3 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004052 354.0
DYD2_k127_5555723_0 Helix-hairpin-helix DNA-binding motif class 1 - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003838 440.0
DYD2_k127_5555723_1 amino acid K03294 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006292 421.0
DYD2_k127_5555723_2 Acyltransferase K00655 - 2.3.1.51 0.000000000000000000000000000000000000000000000000000007094 198.0
DYD2_k127_5555723_3 Phosphate acyltransferases K00655 - 2.3.1.51 0.0000000000000000000000000000000000000000073 162.0
DYD2_k127_5555723_4 - - - - 0.000000000000000000000000000002741 137.0
DYD2_k127_5555723_5 protein conserved in archaea - - - 0.0000000000000001698 91.0
DYD2_k127_5555723_6 Domain of unknown function (DUF4332) - - - 0.0000000000908 72.0
DYD2_k127_5555723_7 SpoVT / AbrB like domain K07172 - - 0.000001069 53.0
DYD2_k127_5555723_8 TonB dependent receptor - - - 0.0001883 53.0
DYD2_k127_5555723_9 PilT protein domain protein - - - 0.0006139 49.0
DYD2_k127_558374_0 X-Pro dipeptidyl-peptidase C-terminal non-catalytic domain - - - 0.0000000000000000000000000000000000000000000001278 189.0
DYD2_k127_558374_1 protein conserved in archaea - - - 0.00000000001427 77.0
DYD2_k127_558374_2 TonB dependent receptor K02014 - - 0.00000003103 64.0
DYD2_k127_5609470_0 Belongs to the GPAT DAPAT family K00631 - 2.3.1.15 0.0000000000000000000000000000000000000000000000000000000000001218 232.0
DYD2_k127_5615308_0 Methyltransferase - - - 0.00000000000000000000000000000000000000000000000000000000000000003948 233.0
DYD2_k127_5615308_1 Thymidylate kinase K00943 GO:0003674,GO:0003824,GO:0004798,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006139,GO:0006220,GO:0006221,GO:0006227,GO:0006233,GO:0006235,GO:0006725,GO:0006753,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0009041,GO:0009058,GO:0009117,GO:0009123,GO:0009132,GO:0009133,GO:0009138,GO:0009139,GO:0009141,GO:0009142,GO:0009147,GO:0009148,GO:0009165,GO:0009186,GO:0009189,GO:0009196,GO:0009197,GO:0009200,GO:0009202,GO:0009211,GO:0009212,GO:0009219,GO:0009221,GO:0009262,GO:0009263,GO:0009265,GO:0009394,GO:0009987,GO:0016301,GO:0016310,GO:0016740,GO:0016772,GO:0016776,GO:0018130,GO:0019205,GO:0019438,GO:0019637,GO:0019692,GO:0034641,GO:0034654,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0044424,GO:0044464,GO:0046072,GO:0046075,GO:0046077,GO:0046385,GO:0046483,GO:0046940,GO:0050145,GO:0055086,GO:0071704,GO:0072527,GO:0072528,GO:0090407,GO:1901135,GO:1901137,GO:1901293,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576 2.7.4.9 0.00000000000000000000000000000001057 134.0
DYD2_k127_5615308_2 COG1522 Transcriptional regulators K03718 - - 0.0000936 54.0
DYD2_k127_5637129_0 Belongs to the thiolase family K00626,K00632 - 2.3.1.16,2.3.1.9 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005145 432.0
DYD2_k127_5637129_1 acyl-CoA dehydrogenase K00248,K00249 - 1.3.8.1,1.3.8.7 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000117 364.0
DYD2_k127_5637129_10 TonB-dependent receptor - - - 0.0002314 52.0
DYD2_k127_5637129_2 Catalyzes the oxidation of 5,10- methylenetetrahydrofolate to 5,10-methenyltetrahydrofolate and then the hydrolysis of 5,10-methenyltetrahydrofolate to 10- formyltetrahydrofolate K01491 - 1.5.1.5,3.5.4.9 0.0000000000000000000000000000000000000000000005301 171.0
DYD2_k127_5637129_3 Metallo-beta-lactamase superfamily - - - 0.00000000000000000000000000000000000000000007658 172.0
DYD2_k127_5637129_4 - - - - 0.000000000000000000000000000000000000002138 159.0
DYD2_k127_5637129_5 Protein of unknown function, DUF488 - - - 0.00000000000000000000000000000000000004611 158.0
DYD2_k127_5637129_6 - - - - 0.00000000000000000000000001983 113.0
DYD2_k127_5637129_7 Transcriptional regulator - - - 0.0000000000001221 78.0
DYD2_k127_5637129_8 Pyruvate phosphate dikinase - - - 0.0000000000006809 78.0
DYD2_k127_5637129_9 PFAM SNARE associated Golgi protein - - - 0.00000000002229 73.0
DYD2_k127_5654519_0 Signal transduction histidine kinase, subgroup 1, dimerisation phosphoacceptor domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000524 291.0
DYD2_k127_5654519_1 Sodium/hydrogen exchanger family - - - 0.0000000000000000000000000000000000000000000000000000000000000000003887 244.0
DYD2_k127_5654519_2 Glycosyl transferases group 1 - - - 0.0000000000000000000000000000000000000000000000000000001574 209.0
DYD2_k127_5654519_3 Evidence 2a Function of homologous gene experimentally demonstrated in an other organism - - - 0.0000000000000000000000000000000000000003662 154.0
DYD2_k127_5654519_4 Glycosyltransferase Family 4 K00743 - 2.4.1.87 0.000000000000000000000000000000001279 144.0
DYD2_k127_5654519_5 Type I phosphodiesterase / nucleotide pyrophosphatase - - - 0.00000000000000000000001099 116.0
DYD2_k127_5654519_6 phosphorelay signal transduction system - - - 0.000000000000000004034 91.0
DYD2_k127_5654519_7 Glycosyl transferase family 21 - - - 0.000000000000004109 87.0
DYD2_k127_5654519_8 CsbD-like - - - 0.00003375 50.0
DYD2_k127_5689927_0 Catalyzes the GTP-dependent ribosomal translocation step during translation elongation. During this step, the ribosome changes from the pre-translocational (PRE) to the post- translocational (POST) state as the newly formed A-site-bound peptidyl-tRNA and P-site-bound deacylated tRNA move to the P and E sites, respectively. Catalyzes the coordinated movement of the two tRNA molecules, the mRNA and conformational changes in the ribosome K03234 - - 5.609e-305 950.0
DYD2_k127_5689927_1 DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates K03044,K13798 GO:0000428,GO:0005575,GO:0005622,GO:0005623,GO:0030880,GO:0032991,GO:0044424,GO:0044464,GO:0061695,GO:1902494,GO:1990234 2.7.7.6 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001419 491.0
DYD2_k127_5689927_10 DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates K03053 GO:0000428,GO:0005575,GO:0005622,GO:0005623,GO:0030880,GO:0032991,GO:0044424,GO:0044464,GO:0061695,GO:1902494,GO:1990234 2.7.7.6 0.00000000000000000008584 91.0
DYD2_k127_5689927_11 Repeats in polycystic kidney disease 1 (PKD1) and other proteins - - - 0.00000001794 65.0
DYD2_k127_5689927_12 - - - - 0.0004688 46.0
DYD2_k127_5689927_2 General factor that plays a role in the activation of archaeal genes transcribed by RNA polymerase. Binds specifically to the TATA box promoter element which lies close to the position of transcription initiation K03120 - - 0.0000000000000000000000000000000000000000000000000000000000000000000026 243.0
DYD2_k127_5689927_3 Glycosyl transferase 4-like domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000001921 246.0
DYD2_k127_5689927_4 With S4 and S5 plays an important role in translational accuracy. Located at the interface of the 30S and 50S subunits K02950 GO:0003674,GO:0003735,GO:0005198,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0006412,GO:0006518,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0015935,GO:0019538,GO:0022626,GO:0022627,GO:0032991,GO:0034641,GO:0034645,GO:0043043,GO:0043170,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:0071704,GO:1901564,GO:1901566,GO:1901576,GO:1990904 - 0.000000000000000000000000000000000000000000000000000000000000000002595 229.0
DYD2_k127_5689927_5 One of the primary rRNA binding proteins, it binds directly to 16S rRNA where it nucleates assembly of the head domain of the 30S subunit. Is located at the subunit interface close to the decoding center K02992 GO:0000028,GO:0003674,GO:0003676,GO:0003723,GO:0003729,GO:0003735,GO:0005198,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0006412,GO:0006518,GO:0006807,GO:0006996,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0015935,GO:0016043,GO:0019538,GO:0019843,GO:0022607,GO:0022613,GO:0022618,GO:0022626,GO:0022627,GO:0032991,GO:0034622,GO:0034641,GO:0034645,GO:0042254,GO:0042255,GO:0042274,GO:0043043,GO:0043170,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043603,GO:0043604,GO:0043933,GO:0044085,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:0065003,GO:0070925,GO:0071704,GO:0071826,GO:0071840,GO:0097159,GO:1901363,GO:1901564,GO:1901566,GO:1901576,GO:1990904 - 0.0000000000000000000000000000000000000000000000000000000000000000074 231.0
DYD2_k127_5689927_6 COG0438 Glycosyltransferase K19002 - 2.4.1.337 0.0000000000000000000000000000000000000000000000002184 191.0
DYD2_k127_5689927_7 X-Pro dipeptidyl-peptidase C-terminal non-catalytic domain - - - 0.0000000000000000000000000000000000000000000001884 188.0
DYD2_k127_5689927_8 Aminotransferase class-V - - - 0.0000000000000000000000000000000000000008077 164.0
DYD2_k127_5689927_9 COG0494 NTP pyrophosphohydrolases including oxidative damage repair enzymes - - - 0.000000000000000000000000000000002188 134.0
DYD2_k127_5709358_0 Zn-dependent metallo-hydrolase RNA specificity domain K12574 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000001654 291.0
DYD2_k127_5709358_1 Glycerol-3-phosphate dehydrogenase K00057 GO:0005575,GO:0005623,GO:0005886,GO:0016020,GO:0044464,GO:0071944 1.1.1.94 0.00000000000000000000000000000000000000000000000000000000000000000000000000000003821 280.0
DYD2_k127_5709358_2 metal-dependent phosphohydrolase, HD sub domain K03698 - - 0.000000000000000000000000000000000000000000000005555 186.0
DYD2_k127_5709358_3 Dehydrogenase K00074 - 1.1.1.157 0.00000000000000000000000000000000000000000000006898 186.0
DYD2_k127_5709358_4 ZIP Zinc transporter - - - 0.000000000000000000000000000000000000000000003501 175.0
DYD2_k127_5709358_5 HAD-superfamily hydrolase, subfamily IA, variant 1 K07025 - - 0.00000000000000000000000002248 126.0
DYD2_k127_5709358_6 Domain of unknown function (DUF309) K09763 - - 0.00000000005006 72.0
DYD2_k127_5716009_0 PFAM NAD-dependent epimerase dehydratase K01784 - 5.1.3.2 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001917 332.0
DYD2_k127_5716009_1 Converts GTP to 7,8-dihydro-D-neopterin 2',3'-cyclic phosphate, the first intermediate in the biosynthesis of coenzyme methanopterin K17488 GO:0003674,GO:0003824,GO:0003933,GO:0016787,GO:0016810,GO:0016814,GO:0019238,GO:0044682 3.5.4.39 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000006498 296.0
DYD2_k127_5716009_2 PFAM Glycosyl transferase family 2 - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000009799 287.0
DYD2_k127_5716009_3 PFAM Glycosyl transferase family 2 - - - 0.000000000000000000000000000000000000000000000000000000000000000001373 235.0
DYD2_k127_5716009_4 PFAM polysaccharide biosynthesis protein - - - 0.0000000000000000000000000000001203 141.0
DYD2_k127_5716009_5 Glycosyl transferase - - - 0.000000000000000000005315 106.0
DYD2_k127_5716009_6 Glycosyl transferase, family 2 - - - 0.000000000000373 79.0
DYD2_k127_5726447_0 Has ATPase and non-specific DNA-binding activities K07456 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000001322 319.0
DYD2_k127_5726447_1 helix_turn_helix ASNC type - - - 0.00000001577 66.0
DYD2_k127_5726447_2 Copper binding proteins, plastocyanin/azurin family - - - 0.0002693 50.0
DYD2_k127_5730744_0 COG1012 NAD-dependent aldehyde dehydrogenases K00128 - 1.2.1.3 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000361 477.0
DYD2_k127_5730744_1 PIN domain K18828 - - 0.000001851 55.0
DYD2_k127_5730744_2 Possibly the antitoxin component of a - - - 0.0002427 46.0
DYD2_k127_5820285_0 COG0417 DNA polymerase elongation subunit (family B) K02319 - 2.7.7.7 0.00000000000000000000000000000000000000000000003488 194.0
DYD2_k127_5820285_1 actin binding K01153,K15524 - 3.1.21.3,3.2.1.170 0.000000000000000000000003764 120.0
DYD2_k127_5820285_10 helix_turn_helix, Arsenical Resistance Operon Repressor - - - 0.000003599 53.0
DYD2_k127_5820285_11 TRANSCRIPTIONal - - - 0.000005437 53.0
DYD2_k127_5820285_12 HNH endonuclease - - - 0.00001187 54.0
DYD2_k127_5820285_13 Nuclease that resolves Holliday junction intermediates in genetic recombination. Cleaves the cruciform structure in supercoiled DNA by nicking to strands with the same polarity at sites symmetrically opposed at the junction in the homologous arms and leaves a 5'-terminal phosphate and a 3'-terminal hydroxyl group K01159 GO:0000725,GO:0003674,GO:0003824,GO:0004518,GO:0004519,GO:0004520,GO:0004536,GO:0005575,GO:0005622,GO:0005623,GO:0006139,GO:0006259,GO:0006260,GO:0006261,GO:0006281,GO:0006310,GO:0006725,GO:0006807,GO:0006950,GO:0006974,GO:0008150,GO:0008152,GO:0008821,GO:0009058,GO:0009059,GO:0009987,GO:0016787,GO:0016788,GO:0016889,GO:0016894,GO:0031297,GO:0032991,GO:0033554,GO:0034641,GO:0034645,GO:0043170,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044424,GO:0044464,GO:0045005,GO:0046483,GO:0048476,GO:0050896,GO:0051716,GO:0071704,GO:0071932,GO:0090304,GO:0090305,GO:0140097,GO:1901360,GO:1901576 3.1.22.4 0.00001414 56.0
DYD2_k127_5820285_14 MazG nucleotide pyrophosphohydrolase domain - - - 0.00006585 52.0
DYD2_k127_5820285_2 Cytidine and deoxycytidylate deaminase zinc-binding region K01493 - 3.5.4.12 0.0000000000000000000006775 106.0
DYD2_k127_5820285_3 HNH endonuclease - - - 0.000000000000000000001151 102.0
DYD2_k127_5820285_4 PFAM SMP-30 Gluconolaconase - - - 0.000000000000445 80.0
DYD2_k127_5820285_7 dephospho-CoA kinase activity - - - 0.00000000005786 72.0
DYD2_k127_5820285_8 - - - - 0.0000001443 61.0
DYD2_k127_5820285_9 chromosome segregation - - - 0.0000003159 63.0
DYD2_k127_5832055_0 Carbohydrate phosphorylase K00688 - 2.4.1.1 2.454e-203 653.0
DYD2_k127_5846029_0 AMP-binding enzyme C-terminal domain - - - 0.00000000624 64.0
DYD2_k127_5847371_0 PhoQ Sensor - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007248 520.0
DYD2_k127_5847371_1 Cell wall-active antibiotics response 4TMS YvqF - - - 0.00000000000000000000000000000000000000008919 159.0
DYD2_k127_5847371_2 Type II secretion system K07333 - - 0.0000000000000000000000000000000000000001928 169.0
DYD2_k127_5847371_3 Type II secretion system (T2SS), protein F K07333 - - 0.00000000000000000000000000000000000003761 150.0
DYD2_k127_5847371_4 - - - - 0.00000002322 66.0
DYD2_k127_5847371_5 His Kinase A (phosphoacceptor) domain - - - 0.0000001309 57.0
DYD2_k127_5847371_6 Transmembrane exosortase (Exosortase_EpsH) - - - 0.000005408 58.0
DYD2_k127_5868041_0 Transposase IS4 family protein K07495 - - 0.000000001834 69.0
DYD2_k127_5868041_1 Protein of unknown function (DUF1761) - - - 0.00005735 51.0
DYD2_k127_588335_0 X-Pro dipeptidyl-peptidase C-terminal non-catalytic domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004515 515.0
DYD2_k127_588335_1 Alpha/beta hydrolase family - - - 0.00000000000000000000000000000000000000000002023 172.0
DYD2_k127_588335_2 PIN domain - - - 0.00000000000000000007148 96.0
DYD2_k127_588335_3 - - - - 0.0000000000392 66.0
DYD2_k127_588335_4 guanyl-nucleotide exchange factor activity - - - 0.000002495 58.0
DYD2_k127_588335_5 ParE toxin of type II toxin-antitoxin system, parDE K06218 - - 0.000005885 53.0
DYD2_k127_588335_6 - - - - 0.00002454 50.0
DYD2_k127_588335_7 Carboxypeptidase regulatory-like domain - - - 0.0003993 52.0
DYD2_k127_5907568_0 NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be a menaquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient K00333 GO:0003674,GO:0003824,GO:0003954,GO:0008137,GO:0008150,GO:0008152,GO:0016491,GO:0016651,GO:0016655,GO:0050136,GO:0055114 1.6.5.3 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008911 364.0
DYD2_k127_5907568_1 NADH dehydrogenase K00337 GO:0003674,GO:0003824,GO:0003954,GO:0008137,GO:0008150,GO:0008152,GO:0016491,GO:0016651,GO:0016655,GO:0050136,GO:0055114 1.6.5.3 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000006446 293.0
DYD2_k127_5907568_2 4Fe-4S dicluster domain K00338 - 1.6.5.3 0.000000000000000000000000002619 119.0
DYD2_k127_5907568_3 NADH ubiquinone oxidoreductase subunit 11 or 4L (Chain K) K00340 - 1.6.5.3 0.0000000000000000001513 96.0
DYD2_k127_5907568_4 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus K00341 - 1.6.5.3 0.000000000000000003286 90.0
DYD2_k127_5907568_5 NADH-ubiquinone/plastoquinone oxidoreductase chain 6 K00339,K05578 - 1.6.5.3 0.0000001081 63.0
DYD2_k127_5907568_6 NADH-ubiquinone/plastoquinone oxidoreductase chain 6 K00339,K05578 - 1.6.5.3 0.0000352 53.0
DYD2_k127_5926328_0 The UvrABC repair system catalyzes the recognition and processing of DNA lesions. UvrA is an ATPase and a DNA-binding protein. A damage recognition complex composed of 2 UvrA and 2 UvrB subunits scans DNA for abnormalities. When the presence of a lesion has been verified by UvrB, the UvrA molecules dissociate K03701 - - 0.0 1146.0
DYD2_k127_5926328_1 damaged site, the DNA wraps around one UvrB monomer. DNA wrap is dependent on ATP binding by UvrB and probably causes local melting of the DNA helix, facilitating insertion of UvrB beta-hairpin between the DNA strands. Then UvrB probes one DNA strand for the presence of a lesion. If a lesion is found the UvrA subunits dissociate and the UvrB-DNA preincision complex is formed. This complex is subsequently bound by UvrC and the second UvrB is released. If no lesion is found, the DNA wraps around the other UvrB subunit that will check the other stand for damage K03702 - - 3.663e-246 776.0
DYD2_k127_5926328_10 protein conserved in archaea - - - 0.000000000004354 78.0
DYD2_k127_5926328_11 Multi-sensor signal transduction histidine kinase - - - 0.00000000003486 75.0
DYD2_k127_5926328_12 LVIVD repeat - - - 0.000000008526 68.0
DYD2_k127_5926328_13 TonB-dependent receptor K02014,K16089 - - 0.000525 51.0
DYD2_k127_5926328_2 Catalyzes the attachment of threonine to tRNA(Thr) in a two-step reaction L-threonine is first activated by ATP to form Thr-AMP and then transferred to the acceptor end of tRNA(Thr) K01868 GO:0003674,GO:0003824,GO:0004812,GO:0004829,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006082,GO:0006139,GO:0006399,GO:0006412,GO:0006418,GO:0006435,GO:0006518,GO:0006520,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0016070,GO:0016874,GO:0016875,GO:0019538,GO:0019752,GO:0034641,GO:0034645,GO:0034660,GO:0043038,GO:0043039,GO:0043043,GO:0043170,GO:0043436,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044281,GO:0044424,GO:0044464,GO:0046483,GO:0071704,GO:0090304,GO:0140098,GO:0140101,GO:1901360,GO:1901564,GO:1901566,GO:1901576 6.1.1.3 5.361e-208 666.0
DYD2_k127_5926328_3 COG0604 NADPH quinone reductase and related Zn-dependent oxidoreductases K00344 - 1.6.5.5 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001754 335.0
DYD2_k127_5926328_4 Aminotransferase K00812,K22457 GO:0003674,GO:0003824,GO:0008483,GO:0016740,GO:0016769,GO:0047297 2.6.1.1,2.6.1.14 0.000000000000000000000000000000000000000000000000000000000000000521 235.0
DYD2_k127_5926328_5 A G-specific adenine glycosylase K03575 - - 0.0000000000000000000000000000000000000000000000000000000000000008538 233.0
DYD2_k127_5926328_6 X-Pro dipeptidyl-peptidase C-terminal non-catalytic domain - - - 0.000000000000000000000000000000000000000000000000009584 202.0
DYD2_k127_5926328_7 rhodanese - - - 0.0000000000000000000000000000000002793 141.0
DYD2_k127_5926328_9 exo-alpha-(2->6)-sialidase activity - - - 0.000000000000000000000146 112.0
DYD2_k127_5931341_0 Catalyzes the ATP-dependent amidation of deamido-NAD to form NAD. Uses ammonia as a nitrogen source K01916 GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006139,GO:0006725,GO:0006732,GO:0006733,GO:0006753,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009108,GO:0009117,GO:0009165,GO:0009435,GO:0009987,GO:0018130,GO:0019359,GO:0019362,GO:0019363,GO:0019438,GO:0019637,GO:0019674,GO:0034641,GO:0034654,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0044424,GO:0044464,GO:0046483,GO:0046496,GO:0051186,GO:0051188,GO:0055086,GO:0071704,GO:0072524,GO:0072525,GO:0090407,GO:1901293,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576 6.3.1.5 0.000000000000000000000000000000000000000000000000000000000000000001474 236.0
DYD2_k127_5931341_1 Carbon-nitrogen hydrolase K18540 - 3.5.1.100 0.0000000000000000000000000000000000000000000000000000002456 205.0
DYD2_k127_5931341_2 Diphthamide synthase K06927 - 6.3.1.14 0.00000000000000000000000000000000000000000000002878 177.0
DYD2_k127_5931341_3 Pfam:DUF385 - - - 0.00000000000000000000000000000007868 132.0
DYD2_k127_5931341_4 glutamate synthase K00266 - 1.4.1.13,1.4.1.14 0.000000000000000000000000000002229 125.0
DYD2_k127_5931341_5 Protein modifier that is covalently attached to lysine residues of substrate proteins, thereby targeting them for proteasomal degradation. The tagging system is termed pupylation K13570 - - 0.00000000000000000003145 91.0
DYD2_k127_5943314_0 KH, type 1, domain K07041 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002528 516.0
DYD2_k127_5943314_1 ATP-grasp domain K01903 - 6.2.1.5 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001158 349.0
DYD2_k127_5943314_10 signal transduction protein containing a membrane domain an EAL and a GGDEF domain - - - 0.0000000000000000000000183 117.0
DYD2_k127_5943314_11 protein involved in tolerance to K03926 - - 0.00000000000000004331 86.0
DYD2_k127_5943314_2 Succinyl-CoA synthetase functions in the citric acid cycle (TCA), coupling the hydrolysis of succinyl-CoA to the synthesis of either ATP or GTP and thus represents the only step of substrate-level phosphorylation in the TCA. The alpha subunit of the enzyme binds the substrates coenzyme A and phosphate, while succinate binding and nucleotide specificity is provided by the beta subunit K01902 - 6.2.1.5 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009507 327.0
DYD2_k127_5943314_3 Component of the proteasome core, a large protease complex with broad specificity involved in protein degradation K03433 GO:0000502,GO:0003674,GO:0003824,GO:0004175,GO:0004298,GO:0005575,GO:0005622,GO:0005623,GO:0005839,GO:0006508,GO:0006807,GO:0008150,GO:0008152,GO:0008233,GO:0009056,GO:0009057,GO:0009987,GO:0010498,GO:0016787,GO:0019538,GO:0019774,GO:0030163,GO:0032991,GO:0043170,GO:0044237,GO:0044238,GO:0044248,GO:0044257,GO:0044260,GO:0044265,GO:0044267,GO:0044424,GO:0044464,GO:0051603,GO:0070003,GO:0070011,GO:0071704,GO:0140096,GO:1901564,GO:1901565,GO:1901575,GO:1902494,GO:1905368,GO:1905369 3.4.25.1 0.0000000000000000000000000000000000000000000000000000000000000000000000356 247.0
DYD2_k127_5943314_4 Peptidase family M50 - - - 0.000000000000000000000000000000000000000000000000000000000000006557 233.0
DYD2_k127_5943314_5 Catalyzes the conversion of N-formimidoyl-L-glutamate to L-glutamate and formamide K01479 - 3.5.3.8 0.00000000000000000000000000000000000000000000000000000009983 206.0
DYD2_k127_5943314_6 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase - - - 0.0000000000000000000000000000000000000000000000000001913 211.0
DYD2_k127_5943314_7 Domain of unknown function (DUF373) K08975 - - 0.0000000000000000000000000000000000000000003307 172.0
DYD2_k127_5943314_8 archaeal coiled-coil protein - - - 0.0000000000000000000000000000000000000002907 160.0
DYD2_k127_5943314_9 Catalyzes the transfer of diphosphate from ATP to 6- hydroxymethyl-7,8-dihydropterin (6-HMD), leading to 6- hydroxymethyl-7,8-dihydropterin diphosphate (6-HMDP) K07142 - 2.7.6.3 0.000000000000000000000000000000000000004928 154.0
DYD2_k127_594526_0 D-isomer specific 2-hydroxyacid dehydrogenase catalytic K00058 - 1.1.1.399,1.1.1.95 0.0000000000000000000000000000000000000000000000000002684 188.0
DYD2_k127_594526_1 - - - - 0.0005646 53.0
DYD2_k127_5948105_0 Structure-specific nuclease with 5'-flap endonuclease and 5'-3' exonuclease activities involved in DNA replication and repair. During DNA replication, cleaves the 5'-overhanging flap structure that is generated by displacement synthesis when DNA polymerase encounters the 5'-end of a downstream Okazaki fragment. Binds the unpaired 3'-DNA end and kinks the DNA to facilitate 5' cleavage specificity. Cleaves one nucleotide into the double- stranded DNA from the junction in flap DNA, leaving a nick for ligation. Also involved in the base excision repair (BER) pathway. Acts as a genome stabilization factor that prevents flaps from equilibrating into structurs that lead to duplications and deletions. Also possesses 5'-3' exonuclease activity on nicked or gapped double-stranded DNA K04799 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004482 358.0
DYD2_k127_5948105_1 Oxidoreductase molybdopterin binding - - - 0.0000000000000000000000000000000000000000000000000000000000000000000007431 241.0
DYD2_k127_5948105_2 PFAM elongation factor Tu domain 2 - - - 0.00000000000000000000000000000000000000000000000000001644 199.0
DYD2_k127_5948105_3 phosphatidylserine decarboxylase K01613 - 4.1.1.65 0.000000000000000000000001933 107.0
DYD2_k127_5948105_4 PFAM Transmembrane exosortase (Exosortase_EpsH) - - - 0.00000000000000001307 96.0
DYD2_k127_5948105_5 Transcriptional regulator K02529 - - 0.00000000142 64.0
DYD2_k127_5951231_0 Zinc-binding dehydrogenase K00344 - 1.6.5.5 0.000000000000000000000000000000000000000000000000000000000000000000000004823 249.0
DYD2_k127_5951231_1 Catalyzes the formation of the isocyclic ring in chlorophyll biosynthesis. Mediates the cyclase reaction, which results in the formation of divinylprotochlorophyllide (Pchlide) characteristic of all chlorophylls from magnesium-protoporphyrin IX 13-monomethyl ester (MgPMME) - - - 0.00000000000000000000000000000000000000000000000000000000000000003365 233.0
DYD2_k127_5951231_2 peroxiredoxin activity K03564 - 1.11.1.15 0.00000000000000000000000000000000000000000000000000000002816 203.0
DYD2_k127_5951231_3 Ion transporter K10716 - - 0.00000000000000000004814 99.0
DYD2_k127_5951231_4 Secreted protein containing C-terminal beta-propeller domain distantly related to WD-40 repeats - - - 0.00000002063 67.0
DYD2_k127_5951231_5 - - - - 0.00000003441 62.0
DYD2_k127_5951231_6 Tfp pilus assembly protein tip-associated adhesin K02674 - - 0.000001332 60.0
DYD2_k127_5951231_7 COG0454 Histone acetyltransferase HPA2 and related acetyltransferases - - - 0.00002583 53.0
DYD2_k127_5964992_0 Pyridoxal-phosphate dependent enzyme K01754 - 4.3.1.19 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003016 319.0
DYD2_k127_5964992_1 X-Pro dipeptidyl-peptidase C-terminal non-catalytic domain - - - 0.00000000000000000000000000000000000000004447 173.0
DYD2_k127_5964992_2 DNA binding protein - - - 0.0000000000000000000000008896 114.0
DYD2_k127_5964992_3 X-Pro dipeptidyl-peptidase C-terminal non-catalytic domain K06978 - - 0.0000000002228 71.0
DYD2_k127_5964992_4 - - - - 0.0000000003053 72.0
DYD2_k127_5964992_5 Carboxypeptidase regulatory-like domain - - - 0.000149 53.0
DYD2_k127_5966799_0 X-Pro dipeptidyl-peptidase C-terminal non-catalytic domain - - - 0.00000000000000000000000000000000000000000005426 180.0
DYD2_k127_5980161_0 Catalyzes the conversion of (8S)-3',8-cyclo-7,8- dihydroguanosine 5'-triphosphate to cyclic pyranopterin monophosphate (cPMP) K03637 - 4.6.1.17 0.00000000000000000000000000000000000000003123 160.0
DYD2_k127_5980161_1 MoaE protein K03635 - 2.8.1.12 0.0000000000000000000000000001738 119.0
DYD2_k127_5980161_2 - - - - 0.0003713 50.0
DYD2_k127_5983514_0 PFAM type II secretion system protein E K07332 - - 0.0000000000000000000000000000000000000000000000000000000000000000000007469 241.0
DYD2_k127_5983514_1 Type II secretion system (T2SS), protein F K07333 - - 0.00000000000000000000000000000000000000000000000007404 201.0
DYD2_k127_5983514_2 Type II secretion system K07333 - - 0.00000000000000000000000000000000000000000000003024 181.0
DYD2_k127_6004135_0 Domain of unknown function (DU1801) - - - 0.00000000000000000000000000000000000000003082 164.0
DYD2_k127_6004135_1 dipeptidyl-peptidase activity K06978 - - 0.0000000000000000000000001891 122.0
DYD2_k127_6004135_2 Pfam:KaiC - - - 0.000000000000001575 83.0
DYD2_k127_6004135_3 cellulase activity - - - 0.000000002231 69.0
DYD2_k127_6004135_4 cheY-homologous receiver domain K03413 - - 0.0000002137 58.0
DYD2_k127_6004135_5 catalyzes the demethylation of specific methylglutamate residues introduced into the chemoreceptors (methyl-accepting chemotaxis proteins) by CheR K03412 - 3.1.1.61,3.5.1.44 0.0000002885 58.0
DYD2_k127_6004135_6 glyoxalase III activity - - - 0.00000182 56.0
DYD2_k127_6059418_0 Part of the phosphoribosylformylglycinamidine synthase complex involved in the purines biosynthetic pathway. Catalyzes the ATP-dependent conversion of formylglycinamide ribonucleotide (FGAR) and glutamine to yield formylglycinamidine ribonucleotide (FGAM) and glutamate. The FGAM synthase complex is composed of three subunits. PurQ produces an ammonia molecule by converting glutamine to glutamate. PurL transfers the ammonia molecule to FGAR to form FGAM in an ATP-dependent manner. PurS interacts with PurQ and PurL and is thought to assist in the transfer of the ammonia molecule from PurQ to PurL K01952 - 6.3.5.3 1.134e-252 803.0
DYD2_k127_6059418_1 Part of the phosphoribosylformylglycinamidine synthase complex involved in the purines biosynthetic pathway. Catalyzes the ATP-dependent conversion of formylglycinamide ribonucleotide (FGAR) and glutamine to yield formylglycinamidine ribonucleotide (FGAM) and glutamate. The FGAM synthase complex is composed of three subunits. PurQ produces an ammonia molecule by converting glutamine to glutamate. PurL transfers the ammonia molecule to FGAR to form FGAM in an ATP-dependent manner. PurS interacts with PurQ and PurL and is thought to assist in the transfer of the ammonia molecule from PurQ to PurL K01952 - 6.3.5.3 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000007604 304.0
DYD2_k127_6059418_2 tRNA intron endonuclease, catalytic C-terminal domain K01170 GO:0000213,GO:0000379,GO:0000394,GO:0003674,GO:0003824,GO:0004518,GO:0004519,GO:0004521,GO:0004540,GO:0004549,GO:0006139,GO:0006388,GO:0006396,GO:0006399,GO:0006725,GO:0006807,GO:0008033,GO:0008150,GO:0008152,GO:0008380,GO:0009987,GO:0010467,GO:0016070,GO:0016787,GO:0016788,GO:0016892,GO:0016894,GO:0034470,GO:0034641,GO:0034660,GO:0043170,GO:0044237,GO:0044238,GO:0046483,GO:0071704,GO:0090304,GO:0090305,GO:0090501,GO:0090502,GO:0140098,GO:0140101,GO:1901360 4.6.1.16 0.0000000000000000000000000000000000000000000000000000000007615 214.0
DYD2_k127_6059418_3 Part of the phosphoribosylformylglycinamidine synthase complex involved in the purines biosynthetic pathway. Catalyzes the ATP-dependent conversion of formylglycinamide ribonucleotide (FGAR) and glutamine to yield formylglycinamidine ribonucleotide (FGAM) and glutamate. The FGAM synthase complex is composed of three subunits. PurQ produces an ammonia molecule by converting glutamine to glutamate. PurL transfers the ammonia molecule to FGAR to form FGAM in an ATP-dependent manner. PurS interacts with PurQ and PurL and is thought to assist in the transfer of the ammonia molecule from PurQ to PurL K01952 - 6.3.5.3 0.00000000000000002986 85.0
DYD2_k127_6059568_0 phosphatidylinositol metabolic process - - - 0.000000000000000000000000000195 126.0
DYD2_k127_6059568_1 Toxic component of a toxin-antitoxin (TA) module. An RNase - - - 0.00000000000000000002657 95.0
DYD2_k127_6059568_2 Putative antitoxin - - - 0.0000000226 61.0
DYD2_k127_6059568_3 resistance protein K14166 - - 0.0000001224 61.0
DYD2_k127_6059568_4 integral membrane protein - - - 0.00002753 52.0
DYD2_k127_6076836_0 Belongs to the universal ribosomal protein uL16 family K02866 - - 0.0000000000000000000000000000000000000000000000001463 182.0
DYD2_k127_6076836_1 Catalyzes the formation of isopentenyl diphosphate (IPP), the building block of all isoprenoids K06981 - 2.7.4.26 0.0000000000000000000000005103 114.0
DYD2_k127_6076836_2 Catalyzes the phosphorylation of (R)-mevalonate (MVA) to (R)-mevalonate 5-phosphate (MVAP). Functions in the mevalonate (MVA) pathway leading to isopentenyl diphosphate (IPP), a key precursor for the biosynthesis of isoprenoid compounds such as archaeal membrane lipids K00869 GO:0003674,GO:0003824,GO:0004496,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006084,GO:0006139,GO:0006163,GO:0006629,GO:0006637,GO:0006644,GO:0006720,GO:0006725,GO:0006732,GO:0006753,GO:0006790,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0008202,GO:0008299,GO:0008610,GO:0008654,GO:0009058,GO:0009117,GO:0009150,GO:0009240,GO:0009259,GO:0009987,GO:0016125,GO:0016301,GO:0016310,GO:0016740,GO:0016772,GO:0016773,GO:0019287,GO:0019637,GO:0019693,GO:0033865,GO:0033875,GO:0034032,GO:0034641,GO:0035383,GO:0043603,GO:0044237,GO:0044238,GO:0044249,GO:0044255,GO:0044281,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0046490,GO:0051186,GO:0055086,GO:0071704,GO:0072521,GO:0090407,GO:1901135,GO:1901360,GO:1901564,GO:1901576,GO:1901615 2.7.1.36 0.0000000000000006994 80.0
DYD2_k127_6108962_0 domain, Protein K01212,K12287,K20276 - 3.2.1.65 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003655 566.0
DYD2_k127_6108962_1 Peptidase S8 and S53 subtilisin kexin sedolisin K01342,K14645 - 3.4.21.62 0.00000000000000000000000000000000000000000000000000000000000002951 230.0
DYD2_k127_6108962_2 Predicted integral membrane protein (DUF2269) - - - 0.00000000000000000001515 106.0
DYD2_k127_6108962_3 phosphorelay signal transduction system K07714 - - 0.0000000000000002845 88.0
DYD2_k127_6108962_4 Glutamine amidotransferases class-II - - - 0.000000000000003248 87.0
DYD2_k127_6108962_5 Belongs to the glycosyl hydrolase 5 (cellulase A) family K01179,K19668 GO:0005575,GO:0005576 3.2.1.4,3.2.1.91 0.000000003368 70.0
DYD2_k127_6108962_6 acid phosphatase activity - - - 0.00001037 59.0
DYD2_k127_6126471_0 The glycine cleavage system catalyzes the degradation of glycine K00605 - 2.1.2.10 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000001198 305.0
DYD2_k127_6126471_1 membrane - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000134 282.0
DYD2_k127_6126471_2 succinate dehydrogenase K00239 GO:0000104,GO:0000166,GO:0001539,GO:0003674,GO:0003824,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005886,GO:0006091,GO:0006113,GO:0006928,GO:0006950,GO:0006974,GO:0006996,GO:0008150,GO:0008152,GO:0009055,GO:0009061,GO:0009987,GO:0015980,GO:0016020,GO:0016043,GO:0016491,GO:0016627,GO:0022607,GO:0022900,GO:0030030,GO:0030031,GO:0032991,GO:0033554,GO:0036094,GO:0040011,GO:0043167,GO:0043168,GO:0044085,GO:0044237,GO:0044424,GO:0044425,GO:0044444,GO:0044459,GO:0044464,GO:0044780,GO:0044781,GO:0045273,GO:0045274,GO:0045283,GO:0045284,GO:0045333,GO:0048037,GO:0048870,GO:0050660,GO:0050662,GO:0050896,GO:0051179,GO:0051674,GO:0051716,GO:0055114,GO:0070469,GO:0070470,GO:0070925,GO:0071840,GO:0071944,GO:0071949,GO:0071973,GO:0097159,GO:0097588,GO:0098796,GO:0098797,GO:0098803,GO:1901265,GO:1901363 1.3.5.1,1.3.5.4 0.000000000000000000000000000000000000000000000000000000000000000000000000005146 264.0
DYD2_k127_6126471_3 Is also involved in protein lipoylation via its role as an octanoyl lipoyl carrier protein intermediate K02437 - - 0.0000000000000000000000000000000000000000009504 161.0
DYD2_k127_6126471_4 Histidine kinase K07636 - 2.7.13.3 0.0000000000000000000000006654 121.0
DYD2_k127_6126471_5 HD domain - - - 0.00000000000006437 78.0
DYD2_k127_6126471_6 ig-like, plexins, transcription factors - - - 0.0000000000002769 83.0
DYD2_k127_6126471_7 PFAM PKD domain containing protein - - - 0.00002283 57.0
DYD2_k127_6126471_8 PFAM THUMP domain protein K06963 - - 0.0002357 51.0
DYD2_k127_6138368_0 PFAM chaperonin Cpn60 TCP-1 K22447 - - 5.439e-210 666.0
DYD2_k127_6138368_1 Belongs to the 'phage' integrase family K04763 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002498 409.0
DYD2_k127_6138368_10 Catalyzes the reduction of arsenate As(V) to arsenite As(III) K03741 - 1.20.4.1 0.00000000000000000002069 100.0
DYD2_k127_6138368_11 AsnC-type helix-turn-helix domain - - - 0.0002641 49.0
DYD2_k127_6138368_2 Bifunctional enzyme that catalyzes the epimerization of the S- and R-forms of NAD(P)HX and the dehydration of the S-form of NAD(P)HX at the expense of ADP, which is converted to AMP. This allows the repair of both epimers of NAD(P)HX, a damaged form of NAD(P)H that is a result of enzymatic or heat-dependent hydration K17758,K17759 - 4.2.1.136,5.1.99.6 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000003269 298.0
DYD2_k127_6138368_3 Amino acid permease K03294 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000001047 278.0
DYD2_k127_6138368_4 Histidine kinase - - - 0.00000000000000000000000000000000000000000000002576 190.0
DYD2_k127_6138368_5 COG3316 Transposase and inactivated derivatives - - - 0.0000000000000000000000000000000000000000000007864 181.0
DYD2_k127_6138368_6 Ornithine cyclodeaminase/mu-crystallin family K01750 - 4.3.1.12 0.00000000000000000000000000000000000000001198 160.0
DYD2_k127_6138368_7 PFAM metallophosphoesterase K06953 - - 0.000000000000000000000000000000000003615 150.0
DYD2_k127_6138368_8 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase K13924 - 2.1.1.80,3.1.1.61 0.0000000000000000000000000000001279 138.0
DYD2_k127_6138368_9 Contacts the emerging nascent chain on the ribosome K03626 - - 0.000000000000000000000000000004547 125.0
DYD2_k127_6154784_0 Allows the formation of correctly charged Gln-tRNA(Gln) through the transamidation of misacylated Glu-tRNA(Gln) in organisms which lack glutaminyl-tRNA synthetase. The reaction takes place in the presence of glutamine and ATP through an activated gamma-phospho-Glu-tRNA(Gln). The GatDE system is specific for glutamate and does not act on aspartate K09482 - 6.3.5.7 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001665 376.0
DYD2_k127_6154784_1 The glycine cleavage system catalyzes the degradation of glycine. The P protein binds the alpha-amino group of glycine through its pyridoxal phosphate cofactor K00282 - 1.4.4.2 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009096 362.0
DYD2_k127_6154784_2 The glycine cleavage system catalyzes the degradation of glycine. The P protein binds the alpha-amino group of glycine through its pyridoxal phosphate cofactor K00283 - 1.4.4.2 0.000000000000000000000000000000000000000000000000000000000000000000000000000001329 270.0
DYD2_k127_6154784_3 - - - - 0.0004725 51.0
DYD2_k127_6207999_0 Belongs to the class-IV pyridoxal-phosphate-dependent aminotransferase family K00826 - 2.6.1.42 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008352 313.0
DYD2_k127_6207999_1 Aldo/keto reductase family - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000003199 264.0
DYD2_k127_6207999_10 hydrolase activity, acting on ester bonds - - - 0.0000001357 64.0
DYD2_k127_6207999_11 protein conserved in archaea - - - 0.0001034 53.0
DYD2_k127_6207999_12 Integral membrane protein TerC family - - - 0.0004119 48.0
DYD2_k127_6207999_2 Component of the proteasome core, a large protease complex with broad specificity involved in protein degradation K03433 - 3.4.25.1 0.00000000000000000000000000000000000000000000000000000001174 205.0
DYD2_k127_6207999_3 Protein of unknown function (DUF445) - - - 0.00000000000000000007689 105.0
DYD2_k127_6207999_4 protein disulfide oxidoreductase activity - GO:0005575,GO:0005618,GO:0005623,GO:0030312,GO:0044464,GO:0071944 - 0.000000000000000000313 97.0
DYD2_k127_6207999_5 protein histidine kinase activity - - - 0.0000000000000000005708 96.0
DYD2_k127_6207999_6 SMART Transcription regulator, AsnC-type K03718,K03719 - - 0.0000000000000005843 85.0
DYD2_k127_6207999_7 thiolester hydrolase activity K07018 - - 0.000000000002674 78.0
DYD2_k127_6207999_8 - - - - 0.00000000001227 70.0
DYD2_k127_6207999_9 HxlR family - - - 0.00000003288 61.0
DYD2_k127_6208225_0 Methylmalonyl-CoA mutase K01848 - 5.4.99.2 8.683e-224 705.0
DYD2_k127_6208225_1 tRNA synthetases class I (W and Y) K01867 GO:0003674,GO:0003824,GO:0004812,GO:0004830,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006082,GO:0006139,GO:0006399,GO:0006412,GO:0006418,GO:0006436,GO:0006518,GO:0006520,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0016070,GO:0016874,GO:0016875,GO:0019538,GO:0019752,GO:0034641,GO:0034645,GO:0034660,GO:0043038,GO:0043039,GO:0043043,GO:0043170,GO:0043436,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044281,GO:0044424,GO:0044464,GO:0046483,GO:0071704,GO:0090304,GO:0140098,GO:0140101,GO:1901360,GO:1901564,GO:1901566,GO:1901576 6.1.1.2 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000147 462.0
DYD2_k127_6208225_10 TonB dependent receptor - - - 0.00005727 54.0
DYD2_k127_6208225_11 Polyketide cyclase / dehydrase and lipid transport - - - 0.0001577 50.0
DYD2_k127_6208225_12 flagella protein K07327 - - 0.0001613 52.0
DYD2_k127_6208225_2 PFAM Pyridoxal-5'-phosphate-dependent protein beta subunit K01754 - 4.3.1.19 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001015 375.0
DYD2_k127_6208225_3 Pyridoxal-phosphate dependent enzyme K01733 - 4.2.3.1 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008974 370.0
DYD2_k127_6208225_4 COG0189 Glutathione synthase Ribosomal protein S6 modification enzyme (glutaminyl transferase) - - - 0.000000000000000000000000000000000000000000003437 176.0
DYD2_k127_6208225_5 Glyoxalase-like domain K01759,K01849,K05606 - 4.4.1.5,5.1.99.1,5.4.99.2 0.0000000000000000000000000000000000000003151 154.0
DYD2_k127_6208225_6 Acts both as a biotin-- acetyl-CoA-carboxylase ligase and a repressor K03524 - 6.3.4.15 0.0000000000000000000000000000000000004406 151.0
DYD2_k127_6208225_7 Belongs to the dicarboxylate amino acid cation symporter (DAACS) (TC 2.A.23) family - - - 0.000000000000005866 89.0
DYD2_k127_6208225_8 - - - - 0.0000000005978 71.0
DYD2_k127_6208225_9 Phospholipase_D-nuclease N-terminal - - - 0.00000002256 58.0
DYD2_k127_6228724_0 Major facilitator Superfamily - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001788 385.0
DYD2_k127_6228724_1 DegT/DnrJ/EryC1/StrS aminotransferase family K10907 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001852 378.0
DYD2_k127_6228724_2 Belongs to the alpha-IPM synthase homocitrate synthase family K10977 - 2.3.3.14 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002818 343.0
DYD2_k127_6228724_3 His Kinase A (phospho-acceptor) domain - - - 0.0000000000000000000000000000000000000575 163.0
DYD2_k127_6228724_4 Galactose oxidase, central domain - - - 0.000000000000000000000000000000156 136.0
DYD2_k127_6228724_6 Type II secretory pathway, ATPase PulE Tfp pilus assembly pathway, ATPase PilB K02454 - - 0.0000000000000001225 85.0
DYD2_k127_6228724_7 COG0784 FOG CheY-like receiver - - - 0.000001311 56.0
DYD2_k127_6228724_8 - - - - 0.00001705 54.0
DYD2_k127_6250694_0 Catalyzes the reversible conversion of ribose-5- phosphate to ribulose 5-phosphate K01807 - 5.3.1.6 0.00000000000000000000000000000000000000000000000000000000004689 213.0
DYD2_k127_6250694_1 Rieske (2fe-2S) K00499 - 1.14.15.7 0.0000000000000000000000000000000000000000000000000008162 200.0
DYD2_k127_6250694_2 Non-catalytic component of the exosome, which is a complex involved in RNA degradation. Increases the RNA binding and the efficiency of RNA degradation. Helpful for the interaction of the exosome with A-poor RNAs K07573 - - 0.00000000000000000000000000000000005529 141.0
DYD2_k127_6250694_3 Acetyltransferase (GNAT) domain - - - 0.000000000182 67.0
DYD2_k127_6256835_0 Universal stress protein - - - 0.000000000000002373 88.0
DYD2_k127_6256835_1 COG0589 Universal stress protein UspA and related nucleotide-binding proteins - - - 0.00001442 55.0
DYD2_k127_6326966_0 FeS assembly protein SufB K07033,K09014 GO:0003674,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006790,GO:0008150,GO:0008152,GO:0009536,GO:0009842,GO:0009987,GO:0016043,GO:0016226,GO:0022607,GO:0031163,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0044085,GO:0044237,GO:0044424,GO:0044444,GO:0044464,GO:0048037,GO:0051186,GO:0051536,GO:0051537,GO:0051539,GO:0051540,GO:0071840 - 1.38e-248 774.0
DYD2_k127_6326966_1 Catalyzes the removal of elemental sulfur and selenium atoms from L-cysteine, L-cystine, L-selenocysteine, and L- selenocystine to produce L-alanine K11717 - 2.8.1.7,4.4.1.16 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001126 493.0
DYD2_k127_6326966_2 ABC transporter K09013 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002358 356.0
DYD2_k127_6326966_3 FeS assembly protein SufD K07033,K09015 GO:0006790,GO:0006950,GO:0006979,GO:0008150,GO:0008152,GO:0009987,GO:0016043,GO:0016226,GO:0022607,GO:0031163,GO:0044085,GO:0044237,GO:0050896,GO:0051186,GO:0071840 - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001726 363.0
DYD2_k127_6326966_4 SUF system FeS assembly protein, NifU family K04488 - - 0.00000000000000000000000001426 126.0
DYD2_k127_6341533_0 Possesses two activities a DNA synthesis (polymerase) and an exonucleolytic activity that degrades single-stranded DNA in the 3'- to 5'-direction. Has a template-primer preference which is characteristic of a replicative DNA polymerase K02322 GO:0003674,GO:0005488,GO:0005515,GO:0042802 2.7.7.7 0.0 1078.0
DYD2_k127_6341533_1 Domain of unknown function (DUF1611_N) Rossmann-like domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000001918 307.0
DYD2_k127_6341533_2 X-Pro dipeptidyl-peptidase C-terminal non-catalytic domain - - - 0.000000000000000000000000000000000000000000000000000009338 211.0
DYD2_k127_6341533_3 COG4948 L-alanine-DL-glutamate epimerase and related enzymes of enolase superfamily K19802 - 5.1.1.20 0.00000000000000000000000000000000000000000000000001108 196.0
DYD2_k127_6341533_4 PFAM glycosyl transferase family 39 K00728 - 2.4.1.109 0.0000000000000000000006382 111.0
DYD2_k127_6341533_5 - - - - 0.000000000000000002282 93.0
DYD2_k127_6341533_6 PFAM Methylated-DNA- protein -cysteine S-methyltransferase DNA binding K00567 - 2.1.1.63 0.000000001003 61.0
DYD2_k127_6341533_7 TonB dependent receptor K02014,K16087 - - 0.0005008 51.0
DYD2_k127_6389988_0 Catalyzes the reduction of 1-pyrroline-5-carboxylate (PCA) to L-proline K00286 - 1.5.1.2 0.00000000000000000000000000000000000000000000000000000000000000000000008864 249.0
DYD2_k127_6389988_1 Phosphatase that hydrolyzes non-canonical purine nucleotides such as XTP and ITP to their respective diphosphate derivatives. Probably excludes non-canonical purines from DNA precursor pool, thus preventing their incorporation into DNA and avoiding chromosomal lesions K02201 GO:0003674,GO:0003824,GO:0004140,GO:0006139,GO:0006163,GO:0006164,GO:0006725,GO:0006732,GO:0006753,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009108,GO:0009117,GO:0009150,GO:0009152,GO:0009165,GO:0009259,GO:0009260,GO:0009987,GO:0015936,GO:0015937,GO:0016301,GO:0016310,GO:0016740,GO:0016772,GO:0016773,GO:0018130,GO:0019438,GO:0019637,GO:0019693,GO:0033865,GO:0033866,GO:0033875,GO:0034030,GO:0034032,GO:0034033,GO:0034641,GO:0034654,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0046390,GO:0046483,GO:0051186,GO:0051188,GO:0055086,GO:0071704,GO:0072521,GO:0072522,GO:0090407,GO:1901135,GO:1901137,GO:1901293,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576 2.7.7.3 0.00000000000000000000000000000000000000000000000000000000002568 224.0
DYD2_k127_6412808_0 HxlR-like helix-turn-helix - - - 0.00000003134 60.0
DYD2_k127_6412808_1 domain protein K14475 - - 0.0002795 52.0
DYD2_k127_6422025_0 X-Pro dipeptidyl-peptidase C-terminal non-catalytic domain - - - 0.00000000000000000000000000000000000000000000000000000000000000001112 247.0
DYD2_k127_6422025_1 Belongs to the peptidase S16 family K06870 - - 0.000000000000000000000000000000000000000000000000000000000001805 234.0
DYD2_k127_6422025_2 Catalyzes the isomerization between 2-isopropylmalate and 3-isopropylmalate, via the formation of 2-isopropylmaleate K01704 - 4.2.1.33,4.2.1.35 0.000000000000000000000000000000000000000000000000000003275 196.0
DYD2_k127_6422025_3 Zinc carboxypeptidase - - - 0.000000000000000000000000000000005347 149.0
DYD2_k127_6422025_4 X-Pro dipeptidyl-peptidase C-terminal non-catalytic domain - - - 0.00000000000000000000000000000001102 135.0
DYD2_k127_6422025_5 - - - - 0.00001053 55.0
DYD2_k127_6446698_0 Belongs to the universal stress protein A family - - - 0.00000000000000008396 91.0
DYD2_k127_6446698_1 2TM domain - - - 0.00000000127 63.0
DYD2_k127_6465576_0 TIGRFAM acetyl-CoA carboxylase, biotin carboxylase K01959 - 6.4.1.1 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004303 510.0
DYD2_k127_6465576_1 Acyl transferase domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006251 389.0
DYD2_k127_6465576_2 Biotin-requiring enzyme K01960 - 6.4.1.1 0.00000000000002158 83.0
DYD2_k127_6465576_3 BioY family K03523 - - 0.000000000002484 78.0
DYD2_k127_655614_0 Responsible for synthesis of pseudouridine from uracil- 54 and uracil-55 in the psi GC loop of transfer RNAs K07583 - 5.4.99.25 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000002355 301.0
DYD2_k127_655614_1 COG1549 Queuine tRNA-ribosyltransferases, contain PUA domain K07557 - 2.6.1.97 0.00000000000000000000000000000000000000000000000000000000000000339 237.0
DYD2_k127_655614_10 Specifically catalyzes the N1-methylation of pseudouridine at position 54 (Psi54) in tRNAs K16317 GO:0001510,GO:0003674,GO:0003824,GO:0006139,GO:0006396,GO:0006399,GO:0006400,GO:0006725,GO:0006807,GO:0008033,GO:0008150,GO:0008152,GO:0008168,GO:0008173,GO:0008175,GO:0009451,GO:0009987,GO:0010467,GO:0016070,GO:0016740,GO:0016741,GO:0030488,GO:0032259,GO:0034470,GO:0034641,GO:0034660,GO:0043170,GO:0043412,GO:0043414,GO:0044237,GO:0044238,GO:0044260,GO:0046483,GO:0071704,GO:0090304,GO:0140098,GO:0140101,GO:1901360 2.1.1.257 0.00000008825 55.0
DYD2_k127_655614_2 cation diffusion facilitator family transporter K16264 - - 0.0000000000000000000000000000000000000000000000000000000000009528 224.0
DYD2_k127_655614_3 Helix-hairpin-helix motif K07572 - - 0.000000000000000000000000000000000000000000000000000000000001817 214.0
DYD2_k127_655614_4 Specifically dimethylates two adjacent adenosines in the loop of a conserved hairpin near the 3'-end of 16S rRNA in the 30S particle. May play a critical role in biogenesis of 30S subunits K02528 - 2.1.1.182 0.0000000000000000000000000000000000000000000000000006656 198.0
DYD2_k127_655614_5 PFAM methyltransferase small K02493 - 2.1.1.297 0.00000000000000000000000000003091 124.0
DYD2_k127_655614_6 Belongs to the eukaryotic ribosomal protein eL21 family K02889 - - 0.000000000000000000000000158 108.0
DYD2_k127_655614_7 RNA polymerase K03051 - 2.7.7.6 0.00000000000000003162 86.0
DYD2_k127_655614_8 Ribbon-helix-helix protein, copG family K07722 - - 0.00000000000003212 79.0
DYD2_k127_655614_9 Domain of unknown function (DUF4332) - - - 0.00000001455 66.0
DYD2_k127_6562984_0 Major Facilitator Superfamily - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001049 381.0
DYD2_k127_6562984_1 Domain of unknown function (DUF1330) - - - 0.000000000000000007096 98.0
DYD2_k127_657310_0 Subtilase family K17734 - - 0.000000000000000000000000000000000000000000000000000000000000001385 231.0
DYD2_k127_657310_1 - - - - 0.0000001165 64.0
DYD2_k127_658424_0 Response regulator, receiver K02485 - - 0.00000000000000000000000000001169 124.0
DYD2_k127_658424_1 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily - - - 0.000000000000000000000000008898 110.0
DYD2_k127_658424_2 zinc ion binding - - - 0.00000000009536 72.0
DYD2_k127_658424_3 Sigma-70 like region 4 HTH domain-containing protein - - - 0.00000009658 61.0
DYD2_k127_658424_4 exo-alpha-(2->6)-sialidase activity K01186 - 3.2.1.18 0.00003472 56.0
DYD2_k127_6587128_0 protein conserved in archaea - - - 0.0000001471 63.0
DYD2_k127_6587128_1 exo-alpha-(2->6)-sialidase activity - - - 0.000002018 61.0
DYD2_k127_6590332_0 Phosphoribosylglycinamide synthetase, C domain K01945 - 6.3.4.13 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002 334.0
DYD2_k127_6590332_1 Catalyzes the transfer of a ribosyl phosphate group from 5-phosphoribose 1-diphosphate to orotate, leading to the formation of orotidine monophosphate (OMP) K00762 - 2.4.2.10 0.00000000000000000000000000000000000000000156 162.0
DYD2_k127_6590840_0 Cell division protein 48, CDC48, domain 2 K13525 - - 4.693e-291 914.0
DYD2_k127_6590840_1 Involved in regulation of DNA replication K10725 - - 0.0000000000000000000000000000000000000000000000000000000000000001414 226.0
DYD2_k127_6590840_2 GTPase that associates with the 50S ribosomal subunit and may have a role during protein synthesis or ribosome biogenesis K03665 GO:0003674,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0043021,GO:0043022,GO:0044424,GO:0044464,GO:0044877 - 0.000000000000000000000000000000000000000000000000000000000001239 228.0
DYD2_k127_6590840_3 X-Pro dipeptidyl-peptidase C-terminal non-catalytic domain - - - 0.0000000000000000000000000000000000000000000003496 190.0
DYD2_k127_6590840_4 COG0663 Carbonic anhydrases acetyltransferases, isoleucine patch superfamily - - - 0.00000000000000000000000000000000000001578 147.0
DYD2_k127_6590840_5 Catalyzes the dephosphorylation of 2-phosphoglycolate K22223 - 3.1.3.18 0.0000000000000000000000000001176 124.0
DYD2_k127_6590840_6 PRC-barrel domain - - - 0.000000000000009297 77.0
DYD2_k127_6617878_0 Belongs to the ompA family - - - 0.000000000000000000000000000001029 133.0
DYD2_k127_6617878_2 depolymerase K03932 - - 0.00000001523 64.0
DYD2_k127_6631486_0 cellulose binding - - - 0.00000000000000000000000000007991 118.0
DYD2_k127_6631486_1 LVIVD repeat - - - 0.00000000000000281 88.0
DYD2_k127_6631486_2 LVIVD repeat - - - 0.000000001566 70.0
DYD2_k127_6655237_0 amino acids such as valine, to avoid such errors it has two additional distinct tRNA(Ile)-dependent editing activities. One activity is designated as 'pretransfer' editing and involves the hydrolysis of activated Val-AMP. The other activity is designated 'posttransfer' editing and involves deacylation of mischarged Val-tRNA(Ile) K01870 - 6.1.1.5 1.807e-292 930.0
DYD2_k127_6655237_1 Catalyzes the deamination of 5-methylthioadenosine and S-adenosyl-L-homocysteine into 5-methylthioinosine and S-inosyl-L- homocysteine, respectively. Is also able to deaminate adenosine K12960 - 3.5.4.28,3.5.4.31 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002347 336.0
DYD2_k127_6655237_10 Glycosyltransferase family 87 - - - 0.00001563 59.0
DYD2_k127_6655237_2 ATPases associated with a variety of cellular activities K02003 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000005001 262.0
DYD2_k127_6655237_3 MacB-like periplasmic core domain K02004 - - 0.000000000000000000000000000000000000000000000000000000000000006633 247.0
DYD2_k127_6655237_4 Belongs to the peptidase S8 family K14743 - - 0.00000000000000000000000000000000000000000000000000006059 202.0
DYD2_k127_6655237_5 COGs COG2151 metal-sulfur cluster biosynthetic protein - - - 0.00000000000000000000000000007188 119.0
DYD2_k127_6655237_6 PFAM alkyl hydroperoxide reductase Thiol specific antioxidant Mal allergen K03564 - 1.11.1.15 0.000000000000000000000000001198 118.0
DYD2_k127_6655237_7 involved in cell wall biogenesis K00721 - 2.4.1.83 0.000000000000000007041 99.0
DYD2_k127_6655237_8 - K00960 - 2.7.7.6 0.00000000004885 65.0
DYD2_k127_6655237_9 Peptidase dimerisation domain - - - 0.000001858 51.0
DYD2_k127_6664470_0 Aldo keto - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007611 321.0
DYD2_k127_6664470_1 cellular potassium ion transport K03499 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000006411 272.0
DYD2_k127_6664470_2 PAS fold - - - 0.0000000000000000000000000000000000000007637 170.0
DYD2_k127_6664470_3 metallopeptidase activity - - - 0.0000000000000000000000000000283 127.0
DYD2_k127_6664470_4 helix_turn_helix ASNC type - - - 0.00000000000000273 84.0
DYD2_k127_6664470_5 Winged helix-turn-helix DNA-binding - - - 0.0000000000128 77.0
DYD2_k127_6664470_6 phosphorelay sensor kinase activity K03406,K07675,K17763,K21009 - 2.7.13.3 0.0000000008662 70.0
DYD2_k127_6664470_7 - K07039,K09858 - - 0.00001025 51.0
DYD2_k127_6664470_8 protein conserved in archaea - - - 0.0005122 52.0
DYD2_k127_670861_0 Involved in DNA repair and in homologous recombination. Binds and assemble on single-stranded DNA to form a nucleoprotein filament. Hydrolyzes ATP in a ssDNA-dependent manner and promotes DNA strand exchange between homologous DNA molecules K04483 GO:0000150,GO:0000217,GO:0000400,GO:0000724,GO:0000725,GO:0000730,GO:0003674,GO:0003676,GO:0003677,GO:0003690,GO:0003697,GO:0003824,GO:0005488,GO:0006139,GO:0006259,GO:0006281,GO:0006302,GO:0006310,GO:0006312,GO:0006725,GO:0006807,GO:0006950,GO:0006974,GO:0008094,GO:0008150,GO:0008152,GO:0009314,GO:0009628,GO:0009987,GO:0010212,GO:0016043,GO:0016462,GO:0016787,GO:0016817,GO:0016818,GO:0016887,GO:0017111,GO:0022607,GO:0033554,GO:0034622,GO:0034641,GO:0042148,GO:0042623,GO:0043170,GO:0043933,GO:0044085,GO:0044237,GO:0044238,GO:0044260,GO:0045003,GO:0046483,GO:0050896,GO:0051716,GO:0065003,GO:0065004,GO:0071704,GO:0071824,GO:0071840,GO:0090304,GO:0090735,GO:0097159,GO:0140097,GO:1901360,GO:1901363 - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006085 414.0
DYD2_k127_670861_1 Involved in DNA repair and in homologous recombination. Binds and assemble on single-stranded DNA to form a nucleoprotein filament. Hydrolyzes ATP in a ssDNA-dependent manner and promotes DNA strand exchange between homologous DNA molecules K04483 GO:0000150,GO:0000217,GO:0000400,GO:0000724,GO:0000725,GO:0000730,GO:0003674,GO:0003676,GO:0003677,GO:0003690,GO:0003697,GO:0003824,GO:0005488,GO:0006139,GO:0006259,GO:0006281,GO:0006302,GO:0006310,GO:0006312,GO:0006725,GO:0006807,GO:0006950,GO:0006974,GO:0008094,GO:0008150,GO:0008152,GO:0009314,GO:0009628,GO:0009987,GO:0010212,GO:0016043,GO:0016462,GO:0016787,GO:0016817,GO:0016818,GO:0016887,GO:0017111,GO:0022607,GO:0033554,GO:0034622,GO:0034641,GO:0042148,GO:0042623,GO:0043170,GO:0043933,GO:0044085,GO:0044237,GO:0044238,GO:0044260,GO:0045003,GO:0046483,GO:0050896,GO:0051716,GO:0065003,GO:0065004,GO:0071704,GO:0071824,GO:0071840,GO:0090304,GO:0090735,GO:0097159,GO:0140097,GO:1901360,GO:1901363 - 0.00000000001017 64.0
DYD2_k127_670861_2 protein conserved in archaea - - - 0.0000003172 62.0
DYD2_k127_670861_3 PFAM alkyl hydroperoxide reductase Thiol specific antioxidant Mal allergen K00982,K03564 GO:0003674,GO:0003824,GO:0004601,GO:0005575,GO:0005622,GO:0005623,GO:0005634,GO:0005737,GO:0005829,GO:0005886,GO:0006950,GO:0006979,GO:0008150,GO:0008152,GO:0008379,GO:0009636,GO:0009987,GO:0016020,GO:0016209,GO:0016491,GO:0016667,GO:0016671,GO:0016684,GO:0019725,GO:0032843,GO:0033554,GO:0034599,GO:0042221,GO:0042592,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0044424,GO:0044444,GO:0044464,GO:0045454,GO:0050789,GO:0050794,GO:0050896,GO:0051716,GO:0051920,GO:0055114,GO:0065007,GO:0065008,GO:0070887,GO:0071944,GO:0097237,GO:0098754,GO:0098869,GO:1990748 1.11.1.15,2.7.7.42,2.7.7.89 0.00001506 49.0
DYD2_k127_670861_4 - - - - 0.0001028 47.0
DYD2_k127_679042_0 Putative RNA-binding Domain in PseudoUridine synthase and Archaeosine transglycosylase K07575 GO:0001731,GO:0002181,GO:0002183,GO:0002188,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0006412,GO:0006413,GO:0006518,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0015935,GO:0016043,GO:0019538,GO:0022607,GO:0022613,GO:0022618,GO:0022626,GO:0022627,GO:0032991,GO:0034622,GO:0034641,GO:0034645,GO:0043043,GO:0043170,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043603,GO:0043604,GO:0043933,GO:0044085,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:0065003,GO:0071704,GO:0071826,GO:0071840,GO:1901564,GO:1901566,GO:1901576,GO:1990904 - 0.0000000000000000000000000000000000000000000005785 172.0
DYD2_k127_679042_1 ZPR1-related zinc finger protein K06874 GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0044424,GO:0044464 - 0.0000000000000000000000000000000000000000003027 167.0
DYD2_k127_679042_2 PAP2 superfamily - - - 0.000000000000000000000000000692 123.0
DYD2_k127_679042_3 Pfam:DUF552 K09152 - - 0.000000000000000000001014 100.0
DYD2_k127_679042_4 Glycosyl transferases group 1 - - - 0.00000001373 58.0
DYD2_k127_679042_5 thiolester hydrolase activity K06889 - - 0.00002774 56.0
DYD2_k127_684179_0 Catalyzes the ATP-dependent amination of UTP to CTP with either L-glutamine or ammonia as the source of nitrogen. Regulates intracellular CTP levels through interactions with the four ribonucleotide triphosphates K01937 - 6.3.4.2 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002639 548.0
DYD2_k127_684179_1 Glycosyltransferase family 87 - - - 0.00000000000000000000000000000000000000000002961 177.0
DYD2_k127_684179_2 von Willebrand factor (vWF) type A domain - GO:0005575,GO:0005623,GO:0005886,GO:0016020,GO:0044464,GO:0071944 - 0.000000937 60.0
DYD2_k127_684209_0 Serine/Threonine protein kinases, catalytic domain K12132 - 2.7.11.1 0.00000000000000000000000000000000000000000005348 170.0
DYD2_k127_684209_1 bacterial-type flagellum-dependent cell motility - - - 0.0000000000000000000000000000268 135.0
DYD2_k127_684209_2 Zinc metalloprotease (Elastase) - - - 0.00004309 57.0
DYD2_k127_68796_0 phosphorelay signal transduction system - - - 0.0000000000002423 76.0
DYD2_k127_68796_1 phosphorelay signal transduction system K03413 - - 0.000000000001185 80.0
DYD2_k127_700737_0 PFAM Glycosyl transferase family 2 - - - 0.00000000000000000000000000000000000000000000000000000001671 218.0
DYD2_k127_714473_0 The UvrABC repair system catalyzes the recognition and processing of DNA lesions. UvrC both incises the 5' and 3' sides of the lesion. The N-terminal half is responsible for the 3' incision and the C-terminal half is responsible for the 5' incision K03703 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001097 470.0
DYD2_k127_714473_1 Hydroxymethylglutaryl-CoA reductase, degradative K00054 - 1.1.1.88 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004556 414.0
DYD2_k127_714473_2 phenylalanine-tRNA ligase activity K01890 - 6.1.1.20 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005363 416.0
DYD2_k127_714473_3 Catalyzes the attachment of serine to tRNA(Ser). Is also able to aminoacylate tRNA(Sec) with serine, to form the misacylated tRNA L-seryl-tRNA(Sec), which will be further converted into selenocysteinyl-tRNA(Sec) K01875 - 6.1.1.11 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003802 404.0
DYD2_k127_714473_4 PFAM periplasmic binding protein K02016 - - 0.00000000000000000000000000000000000000000000000000000000000000002324 234.0
DYD2_k127_714473_5 PFAM TonB-dependent Receptor Plug - - - 0.000003365 58.0
DYD2_k127_714473_6 TonB-dependent receptor - - - 0.00002562 55.0
DYD2_k127_714473_7 Histidine kinase - - - 0.00004276 56.0
DYD2_k127_719627_0 Pyridine nucleotide-disulphide oxidoreductase K17218 - 1.8.5.4 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000303 506.0
DYD2_k127_719627_1 PFAM FAD-dependent pyridine nucleotide-disulphide oxidoreductase K17218 - 1.8.5.4 0.00000000000000000000000000000000000000000000000000000000000000000000000000000001126 284.0
DYD2_k127_719627_2 Phosphoribosyl transferase domain K07100 - - 0.000000000000000000000000000000000000002132 158.0
DYD2_k127_719627_3 hemerythrin HHE cation binding domain - - - 0.0000005961 62.0
DYD2_k127_770280_0 FAD dependent oxidoreductase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002792 384.0
DYD2_k127_812569_0 pfam abc K06158 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002429 330.0
DYD2_k127_812569_1 Tetratricopeptide repeats - - - 0.000000000000000000000000000000000000000000000000000000038 218.0
DYD2_k127_812569_2 PFAM transposase, IS4 family protein - - - 0.000000000000000000000000004507 123.0
DYD2_k127_812569_3 Transcriptional regulator K07332 - - 0.00000000001332 75.0
DYD2_k127_823899_0 Essential cell division protein that forms a contractile ring structure (Z ring) at the future cell division site. The regulation of the ring assembly controls the timing and the location of cell division. One of the functions of the FtsZ ring is to recruit other cell division proteins to the septum to produce a new cell wall between the dividing cells. Binds GTP and shows GTPase activity K03531 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002977 469.0
DYD2_k127_823899_1 Vault protein inter-alpha-trypsin domain K07114 - - 0.0000000000000000000000000000000000000000000000000000001172 218.0
DYD2_k127_823899_2 COG1522 Transcriptional regulators - - - 0.000002653 55.0
DYD2_k127_823899_3 dimerisation and phosphoacceptor region - - - 0.00001505 57.0
DYD2_k127_823899_4 Bacterial capsule synthesis protein PGA_cap - - - 0.00003349 57.0
DYD2_k127_844915_0 HupE / UreJ protein - - - 0.0000000000000000000002557 102.0
DYD2_k127_844915_1 - - - - 0.0000000000006623 70.0
DYD2_k127_844915_2 - - - - 0.00009487 54.0
DYD2_k127_844915_3 helix_turn_helix ASNC type - - - 0.0008567 50.0
DYD2_k127_846739_0 TIGRFAM Small GTP-binding protein K06944 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004219 387.0
DYD2_k127_846739_1 ATP-NAD AcoX kinase K00858 - 2.7.1.23 0.000000000000000000000000000000000000000000000000000000000000004183 232.0
DYD2_k127_846739_10 ECF-type riboflavin transporter, S component K16927 - - 0.00008724 54.0
DYD2_k127_846739_11 Toxic component of a toxin-antitoxin (TA) module. An RNase - - - 0.0001254 50.0
DYD2_k127_846739_12 Large extracellular alpha-helical protein K06894,K08693 - 3.1.3.5,3.1.3.6,3.1.4.16 0.000273 52.0
DYD2_k127_846739_13 TonB dependent receptor K02014 - - 0.000276 53.0
DYD2_k127_846739_14 SdrD B-like domain - - - 0.0003993 52.0
DYD2_k127_846739_2 phosphoserine phosphatase K01079 - 3.1.3.3 0.000000000000000000000000000000000000001723 157.0
DYD2_k127_846739_3 ATPases associated with a variety of cellular activities K16785,K16786,K16787 - - 0.00000000000000000000000000000000007681 151.0
DYD2_k127_846739_4 PFAM regulatory protein AsnC Lrp family K03719 - - 0.0000000000001242 78.0
DYD2_k127_846739_5 Transcriptional regulator K07730 - - 0.00000000001144 75.0
DYD2_k127_846739_6 redox protein regulator of disulfide bond formation K07397 - - 0.000000001226 64.0
DYD2_k127_846739_7 Domain of unknown function DUF11 - - - 0.000000006403 64.0
DYD2_k127_846739_8 Transmembrane (T) component of an energy-coupling factor (ECF) ABC-transporter complex. Unlike classic ABC transporters this ECF transporter provides the energy necessary to transport a number of different substrates K16785 - - 0.000002123 59.0
DYD2_k127_846739_9 Domain of unknown function (DUF4430) - - - 0.00005689 52.0
DYD2_k127_855715_0 COG0644 Dehydrogenases (flavoproteins) K00313 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002788 546.0
DYD2_k127_855715_1 Electron transfer flavoprotein alpha subunit - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003386 403.0
DYD2_k127_855715_10 Short-chain dehydrogenase reductase sdr K00059,K03366 - 1.1.1.100,1.1.1.304,1.1.1.76 0.000000000000000000000000003603 121.0
DYD2_k127_855715_11 Uncharacterized conserved protein (DUF2203) - - - 0.000000000000000000003659 101.0
DYD2_k127_855715_12 Signal peptidase, peptidase S26 K03100 - 3.4.21.89 0.0000000000001925 79.0
DYD2_k127_855715_13 membrane - - - 0.00000004005 67.0
DYD2_k127_855715_2 Glycosyl transferases group 1 K13057 - 2.4.1.245 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005858 394.0
DYD2_k127_855715_3 Electron transfer flavoprotein, beta subunit K03521 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007866 325.0
DYD2_k127_855715_4 Highly conserved protein containing a thioredoxin domain K06888 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000006587 310.0
DYD2_k127_855715_5 PFAM Glycosyl transferase family 2 - - - 0.0000000000000000000000000000000000000000000000000000000000000000000079 265.0
DYD2_k127_855715_6 TIGRFAM 3-oxoacyl-(acyl-carrier-protein) reductase K00059 - 1.1.1.100 0.00000000000000000000000000000000000000000000000000000000000003317 222.0
DYD2_k127_855715_7 ATP-dependent agmatine transferase that catalyzes the formation of 2-agmatinylcytidine (agm2C) at the wobble position (C34) of tRNA(Ile2), converting the codon specificity from AUG to AUA K06932 GO:0002097,GO:0002101,GO:0003674,GO:0003824,GO:0006139,GO:0006396,GO:0006399,GO:0006400,GO:0006725,GO:0006807,GO:0008033,GO:0008150,GO:0008152,GO:0009451,GO:0009987,GO:0010467,GO:0016070,GO:0016874,GO:0016879,GO:0034470,GO:0034641,GO:0034660,GO:0043170,GO:0043412,GO:0044237,GO:0044238,GO:0046483,GO:0071704,GO:0090304,GO:1901360 6.3.4.22 0.000000000000000000000000000000000000000000000000000000000286 217.0
DYD2_k127_855715_8 Cytochrome C assembly protein K02198 - - 0.000000000000000000000000000000000000000007397 175.0
DYD2_k127_855715_9 Nickel-containing superoxide dismutase - - - 0.0000000000000000000000000000000000000007284 154.0
DYD2_k127_86162_0 TonB dependent receptor - - - 0.00007202 54.0
DYD2_k127_86162_1 Transcriptional regulator, ArsR family - - - 0.00008364 53.0
DYD2_k127_86162_2 helix_turn_helix, Arsenical Resistance Operon Repressor - - - 0.00009075 51.0
DYD2_k127_881864_0 TIGRFAM methylmalonyl-CoA mutase, large subunit K01848 - 5.4.99.2 3.967e-221 699.0
DYD2_k127_881864_1 PFAM Acyl-CoA dehydrogenase K00248 - 1.3.8.1 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001406 436.0
DYD2_k127_881864_10 threonine efflux protein - - - 0.0000000000000001405 89.0
DYD2_k127_881864_11 ABC-2 family transporter protein K01992 - - 0.000000000000001431 90.0
DYD2_k127_881864_12 - - - - 0.00000000002335 75.0
DYD2_k127_881864_13 protein conserved in archaea - - - 0.00000005113 65.0
DYD2_k127_881864_14 Belongs to the UPF0248 family K09715 - - 0.0000007985 54.0
DYD2_k127_881864_2 LAO AO transport system K07588 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000148 334.0
DYD2_k127_881864_3 ATPases associated with a variety of cellular activities K01990 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008384 310.0
DYD2_k127_881864_4 Nucleolar GTP-binding protein 1 (NOG1) K06943 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000001788 276.0
DYD2_k127_881864_5 TIGRFAM TIGR00268 family protein K06864 - - 0.00000000000000000000000000000000000000000000000000000000000000000000004023 251.0
DYD2_k127_881864_6 Catalyzes the synthesis of 5,6-dihydrouridine (D), a modified base found in the D-loop of most tRNAs, via the reduction of the C5-C6 double bond in target uridines K05540 - - 0.0000000000000000000000000000000000000000000000000000000000000008794 231.0
DYD2_k127_881864_7 methylmalonyl-CoA mutase C-terminal K01849 - 5.4.99.2 0.00000000000000000000000000000000000000000000000000003282 192.0
DYD2_k127_881864_8 Involved in septum formation K06287 GO:0000278,GO:0000281,GO:0000910,GO:0000917,GO:0005575,GO:0005623,GO:0007049,GO:0008150,GO:0009987,GO:0016043,GO:0022402,GO:0022607,GO:0030428,GO:0032506,GO:0044085,GO:0044464,GO:0051301,GO:0061640,GO:0071840,GO:0090529,GO:1902410,GO:1903047 - 0.0000000000000000000000000000000000000000002428 176.0
DYD2_k127_881864_9 Bacteriocin-protection, YdeI or OmpD-Associated - - - 0.0000000000000000000000000000000000004458 146.0
DYD2_k127_886755_0 PFAM FAD dependent oxidoreductase K00111 - 1.1.5.3 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006071 406.0
DYD2_k127_886755_1 exo-alpha-(2->6)-sialidase activity - - - 0.0000000000000000000000001358 123.0
DYD2_k127_892498_0 Catalyzes the NAD(P)H-dependent reduction of dihydroxyacetonephosphate (DHAP or glycerone phosphate) to glycerol 1-phosphate (G1P). The G1P thus generated is used as the glycerophosphate backbone of phospholipids in the cellular membranes of Archaea K00096 - 1.1.1.261 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005935 354.0
DYD2_k127_892498_1 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000001234 250.0
DYD2_k127_892498_2 Belongs to the UPF0179 family K09730 - - 0.00000000000000000001396 100.0
DYD2_k127_892498_3 COG2204 Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains K10943 - - 0.0000000000001016 79.0
DYD2_k127_892498_4 Membrane protein of unknown function DUF63 - - - 0.0000000000006567 81.0
DYD2_k127_892498_5 protein conserved in archaea - - - 0.000000002782 70.0
DYD2_k127_892498_6 TonB dependent receptor - - - 0.0001309 53.0
DYD2_k127_917511_0 NADP oxidoreductase coenzyme F420-dependent K06988 - 1.5.1.40 0.000000000000000000000000000000000000000000000000000000000000000006095 229.0
DYD2_k127_917511_1 Concanavalin A-like lectin/glucanases superfamily - - - 0.00006845 52.0
DYD2_k127_957666_0 CarboxypepD_reg-like domain - - - 0.0006215 51.0
DYD2_k127_966575_0 nucleic acid-binding protein, contains PIN domain K07065 - - 0.000000000006848 71.0
DYD2_k127_966575_1 helix_turn_helix, Arsenical Resistance Operon Repressor - - - 0.000000001182 68.0
DYD2_k127_966575_2 - - - - 0.0000228 50.0
DYD2_k127_970202_0 Belongs to the enoyl-CoA hydratase isomerase family K01715 - 4.2.1.17 0.00000000000000000000000000000000000000000000000000000000000000000000000000000001241 276.0
DYD2_k127_970202_1 Belongs to the aldehyde dehydrogenase family K22187 - - 0.00000000000000000000000000000000000000000000000000000000007777 207.0
DYD2_k127_970202_2 Histidine kinase - - - 0.00000000000000000000000000000000000000000005797 173.0
DYD2_k127_970202_3 Carboxypeptidase regulatory-like domain - - - 0.000001276 57.0
DYD2_k127_970202_4 Aldehyde dehydrogenase family K00128 - 1.2.1.3 0.000213 46.0
DYD2_k127_970202_5 domain protein - - - 0.0002944 52.0