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Overview

ID MAG00924
Name DYD2_bin.48
Sample SMP0026
Taxonomy
Kingdom Archaea
Phylum Thermoplasmatota
Class E2
Order JACPAO01
Family JAHFTW01
Genus JAHFTW01
Species
Assembly information
Completeness (%) 83.8
Contamination (%) 1.52
GC content (%) 66.0
N50 (bp) 8,259
Genome size (bp) 1,798,445

Location

Module

Module ID Module name Total genes Total steps Contain genes Contain steps Percentage of genes Percentage of steps

Genes1375

Gene name Description KEGG GOs EC E-value Score Sequence
DYD2_k127_1008005_0 Bacteriocin-protection, YdeI or OmpD-Associated - - - 0.0000000000000000000000000000000000000000000000004274 186.0
DYD2_k127_1008005_1 helix_turn_helix, Arsenical Resistance Operon Repressor - - - 0.0000000000000000000000000000008324 126.0
DYD2_k127_1008005_2 glyoxalase III activity K02005 - - 0.000003583 49.0
DYD2_k127_1025086_0 ATP binding to DnaK triggers the release of the substrate protein, thus completing the reaction cycle. Several rounds of ATP-dependent interactions between DnaJ, DnaK and GrpE are required for fully efficient folding. Also involved, together with DnaK and GrpE, in the DNA replication of plasmids through activation of initiation proteins K03686 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006652 380.0
DYD2_k127_1025086_1 Catalytic subunit of DNA primase, an RNA polymerase that catalyzes the synthesis of short RNA molecules used as primers for DNA polymerase during DNA replication. The small subunit contains the primase catalytic core and has DNA synthesis activity on its own. Binding to the large subunit stabilizes and modulates the activity, increasing the rate of DNA synthesis while decreasing the length of the DNA fragments, and conferring RNA synthesis capability. The DNA polymerase activity may enable DNA primase to also catalyze primer extension after primer synthesis. May also play a role in DNA repair K02683 - - 0.0000000000000000000000000000000000000000000000000001142 200.0
DYD2_k127_1025086_2 Protein of unknown function (DUF1761) - - - 0.00000165 57.0
DYD2_k127_1045849_0 NYN domain - - - 0.000000000000000000000002848 114.0
DYD2_k127_1048806_0 amino acids such as valine, to avoid such errors it has two additional distinct tRNA(Ile)-dependent editing activities. One activity is designated as 'pretransfer' editing and involves the hydrolysis of activated Val-AMP. The other activity is designated 'posttransfer' editing and involves deacylation of mischarged Val-tRNA(Ile) K01870 - 6.1.1.5 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004421 511.0
DYD2_k127_1048806_1 PFAM blue (type 1) copper domain protein K00368 - 1.7.2.1 0.0000000000002967 76.0
DYD2_k127_1053011_0 Is required not only for elongation of protein synthesis but also for the initiation of all mRNA translation through initiator tRNA(fMet) aminoacylation K01874 GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006082,GO:0006139,GO:0006399,GO:0006412,GO:0006418,GO:0006518,GO:0006520,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0016070,GO:0019538,GO:0019752,GO:0034641,GO:0034645,GO:0034660,GO:0043038,GO:0043039,GO:0043043,GO:0043170,GO:0043436,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044281,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0071704,GO:0090304,GO:1901360,GO:1901564,GO:1901566,GO:1901576 6.1.1.10 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003666 564.0
DYD2_k127_1053011_1 C-terminal domain of alpha-glycerophosphate oxidase K00111 - 1.1.5.3 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001176 398.0
DYD2_k127_1053011_2 COG1404 Subtilisin-like serine proteases K14645 GO:0005575,GO:0005576 - 0.0000000000000000000000000000000000000000000000000000000000000000000002006 263.0
DYD2_k127_1053011_3 ABC transporter K02003 - - 0.00000000000000000000000000000000000000007696 159.0
DYD2_k127_1053011_4 PFAM multicopper oxidase K22348 - 1.16.3.3 0.0000000000000000000000000000001343 136.0
DYD2_k127_1053011_5 Copper binding proteins, plastocyanin/azurin family - - - 0.000000000000284 78.0
DYD2_k127_1053011_6 Helix-turn-helix domain - - - 0.0000003164 61.0
DYD2_k127_1053011_7 - - - - 0.0000009179 55.0
DYD2_k127_1053011_8 ABC-type antimicrobial peptide transport system, permease component - - - 0.000005605 60.0
DYD2_k127_1053011_9 Copper binding proteins, plastocyanin/azurin family - - - 0.000008698 57.0
DYD2_k127_1117312_0 Threonine dehydratase K01754 - 4.3.1.19 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000278 410.0
DYD2_k127_1117312_1 Fructose-bisphosphate aldolase class-I K01623 - 4.1.2.13 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007867 387.0
DYD2_k127_1117312_2 EamA-like transporter family - - - 0.0000000000000000000000000000000000000003157 161.0
DYD2_k127_1127141_0 PFAM tRNA synthetase, class II (G, H, P and S) K01880 - 6.1.1.14 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004656 386.0
DYD2_k127_1130314_0 AI-2E family transporter - - - 0.0000000000000000000000000000000000000000003587 172.0
DYD2_k127_1132053_0 PFAM Chalcone and stilbene synthases, N-terminal domain K16167 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000002497 271.0
DYD2_k127_1132053_1 EVE domain - - - 0.00000000000000000000000000000000000000000000000007193 188.0
DYD2_k127_1132053_2 Redoxin K03564 - 1.11.1.15 0.0000000000000000000000000000000000000001072 156.0
DYD2_k127_1132053_3 Specifically dimethylates two adjacent adenosines (A1518 and A1519) in the loop of a conserved hairpin near the 3'-end of 16S rRNA in the 30S particle. May play a critical role in biogenesis of 30S subunits K02528 - 2.1.1.182 0.0000000000000000000000000000000000000001705 160.0
DYD2_k127_1132053_4 Antioxidant protein with alkyl hydroperoxidase activity. Required for the reduction of the AhpC active site cysteine residues and for the regeneration of the AhpC enzyme activity - - - 0.0000000000000000000000000000000003242 136.0
DYD2_k127_1132053_5 PFAM methyltransferase small K02493 - 2.1.1.297 0.0000000000000000000000000000004215 129.0
DYD2_k127_1132053_6 Isoprenylcysteine carboxyl methyltransferase (ICMT) family K16168 - - 0.000000000000000000000000000007885 124.0
DYD2_k127_1132255_0 Key enzyme in the regulation of glycerol uptake and metabolism. Catalyzes the phosphorylation of glycerol to yield sn- glycerol 3-phosphate K00864 GO:0003674,GO:0003824,GO:0004370,GO:0005975,GO:0006066,GO:0006071,GO:0006793,GO:0006796,GO:0008150,GO:0008152,GO:0009987,GO:0016301,GO:0016310,GO:0016740,GO:0016772,GO:0016773,GO:0019400,GO:0019751,GO:0044237,GO:0044238,GO:0044262,GO:0044281,GO:0071704,GO:1901615 2.7.1.30 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004832 481.0
DYD2_k127_1132255_1 TIGRFAM pyruvate ferredoxin flavodoxin oxidoreductase, beta subunit K00175 - 1.2.7.11,1.2.7.3 0.0000000000000000000000000000000000000000000000000000000000000000000000000001947 263.0
DYD2_k127_1132255_2 Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family K00823 - 2.6.1.19 0.0000000000000000000000000000000000000000000000002716 181.0
DYD2_k127_1132255_3 PFAM SPFH domain Band 7 family - - - 0.0001315 44.0
DYD2_k127_1155092_0 lysyltransferase activity K07027 - - 0.0000000000000000000172 103.0
DYD2_k127_1155092_1 Uncharacterized conserved protein (DUF2203) - - - 0.000000000000008128 81.0
DYD2_k127_1155092_2 ParE toxin of type II toxin-antitoxin system, parDE K06218 - - 0.000000002085 61.0
DYD2_k127_1156298_0 Catalyzes the attachment of proline to tRNA(Pro) in a two-step reaction proline is first activated by ATP to form Pro- AMP and then transferred to the acceptor end of tRNA(Pro) K01881 - 6.1.1.15 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004892 499.0
DYD2_k127_1156298_1 Belongs to the class-I aminoacyl-tRNA synthetase family K01883 - 6.1.1.16 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007626 374.0
DYD2_k127_1156298_2 Presumably involved in the processing and regular turnover of intracellular proteins. Catalyzes the removal of unsubstituted N-terminal amino acids from various peptides K01255 GO:0005575,GO:0005618,GO:0005623,GO:0005886,GO:0016020,GO:0030312,GO:0044464,GO:0071944 3.4.11.1 0.0000000000000000000000000000000000000000000000000000000000000000000000002445 267.0
DYD2_k127_1156298_3 Catalyzes the isomerization between 2-isopropylmalate and 3-isopropylmalate, via the formation of 2-isopropylmaleate K01704 - 4.2.1.33,4.2.1.35 0.0000000000000000000000000000000000001172 148.0
DYD2_k127_1156298_4 Flavin reductase like domain - - - 0.000000000000000000000000002441 117.0
DYD2_k127_1156298_5 metal-dependent hydrolases related to alanyl-tRNA synthetase HxxxH domain K07050 GO:0000049,GO:0002161,GO:0003674,GO:0003676,GO:0003723,GO:0003824,GO:0004812,GO:0004813,GO:0005488,GO:0006082,GO:0006139,GO:0006396,GO:0006399,GO:0006400,GO:0006412,GO:0006418,GO:0006419,GO:0006450,GO:0006518,GO:0006520,GO:0006725,GO:0006807,GO:0008033,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009451,GO:0009987,GO:0010467,GO:0016070,GO:0016597,GO:0016787,GO:0016788,GO:0016874,GO:0016875,GO:0019538,GO:0019752,GO:0031406,GO:0034470,GO:0034641,GO:0034645,GO:0034660,GO:0036094,GO:0043038,GO:0043039,GO:0043043,GO:0043167,GO:0043168,GO:0043170,GO:0043177,GO:0043412,GO:0043436,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044281,GO:0046483,GO:0052689,GO:0065007,GO:0065008,GO:0071704,GO:0090304,GO:0097159,GO:0106074,GO:0140098,GO:0140101,GO:1901360,GO:1901363,GO:1901564,GO:1901566,GO:1901576 - 0.000000000003495 76.0
DYD2_k127_1156298_6 Involved in resistance toward heavy metals K03926 GO:0003674,GO:0005488,GO:0005507,GO:0008150,GO:0009987,GO:0010035,GO:0010038,GO:0016043,GO:0022607,GO:0042221,GO:0043167,GO:0043169,GO:0043933,GO:0044085,GO:0046688,GO:0046872,GO:0046914,GO:0050896,GO:0051259,GO:0051260,GO:0065003,GO:0071840 - 0.0000000646 63.0
DYD2_k127_1156298_7 - - - - 0.0001778 53.0
DYD2_k127_1226815_0 protein conserved in archaea - - - 0.000007243 55.0
DYD2_k127_1273821_0 Protein of unknown function (DUF1246) K06863 - 6.3.4.23 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001496 519.0
DYD2_k127_1273821_1 Regulatory subunit of DNA primase, an RNA polymerase that catalyzes the synthesis of short RNA molecules used as primers for DNA polymerase during DNA replication. Stabilizes and modulates the activity of the small subunit, increasing the rate of DNA synthesis, and conferring RNA synthesis capability. The DNA polymerase activity may enable DNA primase to also catalyze primer extension after primer synthesis. May also play a role in DNA repair K18882 - - 0.000000000000000000000000000000000000000000000000005762 201.0
DYD2_k127_1273821_2 Catalytic subunit of DNA primase, an RNA polymerase that catalyzes the synthesis of short RNA molecules used as primers for DNA polymerase during DNA replication. The small subunit contains the primase catalytic core and has DNA synthesis activity on its own. Binding to the large subunit stabilizes and modulates the activity, increasing the rate of DNA synthesis while decreasing the length of the DNA fragments, and conferring RNA synthesis capability. The DNA polymerase activity may enable DNA primase to also catalyze primer extension after primer synthesis. May also play a role in DNA repair K02683 - - 0.0003324 50.0
DYD2_k127_1298823_0 Relaxes both positive and negative superturns and exhibits a strong decatenase activity K03167 GO:0003674,GO:0003735,GO:0005198,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0006412,GO:0006518,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0015935,GO:0019538,GO:0022613,GO:0032991,GO:0034641,GO:0034645,GO:0042254,GO:0043043,GO:0043170,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043603,GO:0043604,GO:0044085,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044446,GO:0044464,GO:0071704,GO:0071840,GO:1901564,GO:1901566,GO:1901576,GO:1990904 5.99.1.3 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004294 505.0
DYD2_k127_1335376_0 Belongs to the PEP-utilizing enzyme family K01006 - 2.7.9.1 6.54e-312 980.0
DYD2_k127_1335376_1 Involved in the de novo purine biosynthesis. Catalyzes the transfer of formate to 5-phospho-ribosyl-glycinamide (GAR), producing 5-phospho-ribosyl-N-formylglycinamide (FGAR). Formate is provided by PurU via hydrolysis of 10-formyl-tetrahydrofolate K08289 GO:0003674,GO:0003824,GO:0004644,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006139,GO:0006163,GO:0006164,GO:0006725,GO:0006753,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0008776,GO:0009058,GO:0009117,GO:0009150,GO:0009152,GO:0009165,GO:0009259,GO:0009260,GO:0009987,GO:0016301,GO:0016310,GO:0016740,GO:0016741,GO:0016742,GO:0016772,GO:0016774,GO:0018130,GO:0019438,GO:0019637,GO:0019693,GO:0034641,GO:0034654,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0044424,GO:0044444,GO:0044464,GO:0046390,GO:0046483,GO:0055086,GO:0071704,GO:0072521,GO:0072522,GO:0090407,GO:1901135,GO:1901137,GO:1901293,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576 2.1.2.2 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003236 525.0
DYD2_k127_1347332_0 Proton pump that utilizes the energy of pyrophosphate hydrolysis as the driving force for proton movement across the membrane. Generates a proton motive force K15987 - 3.6.1.1 6.726e-237 757.0
DYD2_k127_1347332_1 PFAM Aminotransferase class I and II K00812 - 2.6.1.1 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008503 383.0
DYD2_k127_1347332_2 FAD binding domain - - - 0.00000000000000000000000000000000000000000000000000000000001979 229.0
DYD2_k127_1347332_3 Belongs to the DNA glycosylase MPG family K03652 GO:0003674,GO:0003824,GO:0003905,GO:0006139,GO:0006259,GO:0006281,GO:0006284,GO:0006725,GO:0006807,GO:0006950,GO:0006974,GO:0008150,GO:0008152,GO:0009987,GO:0016787,GO:0016798,GO:0016799,GO:0019104,GO:0033554,GO:0034641,GO:0043170,GO:0044237,GO:0044238,GO:0044260,GO:0046483,GO:0050896,GO:0051716,GO:0071704,GO:0090304,GO:0140097,GO:1901360 3.2.2.21 0.0000000000000000000000000000000000000000000000000001453 194.0
DYD2_k127_1347332_4 COG1028 Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) - - - 0.00000000000000000000000000000000000000005377 163.0
DYD2_k127_1347332_6 PFAM nucleic acid binding, OB-fold, tRNA helicase-type K07466 - - 0.000003302 57.0
DYD2_k127_1402044_0 COG0500 SAM-dependent methyltransferases - - - 0.0000000000000000000000001605 114.0
DYD2_k127_1402044_1 Transcriptional regulator, ArsR family - - - 0.00000000000000002953 96.0
DYD2_k127_1402712_0 amine dehydrogenase activity - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000122 411.0
DYD2_k127_1402712_1 transport, permease protein K01992,K18233 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002496 390.0
DYD2_k127_1402712_10 Putative zinc- or iron-chelating domain - - - 0.000000000000004194 86.0
DYD2_k127_1402712_11 SNARE associated Golgi protein K19302 - 3.6.1.27 0.000000000000007197 89.0
DYD2_k127_1402712_12 Domain of unknown function (DUF4870) K09940 - - 0.000000000003938 78.0
DYD2_k127_1402712_13 Acid phosphatase homologues K19302 - 3.6.1.27 0.00000000408 69.0
DYD2_k127_1402712_14 Dolichyl-phosphate-mannose-protein mannosyltransferase - - - 0.000003118 61.0
DYD2_k127_1402712_15 PHB depolymerase family esterase - - - 0.00001731 58.0
DYD2_k127_1402712_16 SNARE associated Golgi protein K03975,K19302 - 3.6.1.27 0.0001422 55.0
DYD2_k127_1402712_2 ABC transporter K01990,K09695 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003031 390.0
DYD2_k127_1402712_3 DNA repair enzyme that has both DNA N-glycosylase activity and AP-lyase activity. The DNA N-glycosylase activity releases various damaged pyrimidines from DNA by cleaving the N- glycosidic bond, leaving an AP (apurinic apyrimidinic) site. The AP-lyase activity cleaves the phosphodiester bond 3' to the AP site by a beta-elimination, leaving a 3'-terminal unsaturated sugar and a product with a terminal 5'-phosphate K10773 - 4.2.99.18 0.00000000000000000000000000000000000000000000000000000000000000000469 233.0
DYD2_k127_1402712_4 DNA-binding transcription factor activity K07728 - - 0.00000000000000000000000000000000000000000000000000000000000000001476 235.0
DYD2_k127_1402712_5 Short-chain dehydrogenase reductase SDR K00208 - 1.3.1.10,1.3.1.9 0.0000000000000000000000000000000000000000000000000000000001061 218.0
DYD2_k127_1402712_6 PFAM CMP dCMP deaminase zinc-binding K01493 - 3.5.4.12 0.0000000000000000000000000000000000000000000001047 190.0
DYD2_k127_1402712_7 adenyl ribonucleotide binding - - - 0.000000000000000000000000000000000000000289 156.0
DYD2_k127_1402712_8 HxlR-like helix-turn-helix - - - 0.00000000000000000005984 95.0
DYD2_k127_1402712_9 Acetyltransferase (GNAT) domain K00619 - 2.3.1.1 0.00000000000000003 93.0
DYD2_k127_1403132_0 CobW/HypB/UreG, nucleotide-binding domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003903 512.0
DYD2_k127_1403132_1 Reversibly catalyzes the transfer of the carbamoyl group from carbamoyl phosphate (CP) to the N(epsilon) atom of ornithine (ORN) to produce L-citrulline K00611 GO:0000050,GO:0003674,GO:0003824,GO:0004585,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006082,GO:0006520,GO:0006525,GO:0006526,GO:0006591,GO:0006807,GO:0008150,GO:0008152,GO:0008652,GO:0009058,GO:0009064,GO:0009084,GO:0009987,GO:0016053,GO:0016740,GO:0016741,GO:0016743,GO:0019627,GO:0019752,GO:0034641,GO:0042450,GO:0043436,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0044283,GO:0044424,GO:0044464,GO:0046394,GO:0071704,GO:0071941,GO:1901564,GO:1901566,GO:1901576,GO:1901605,GO:1901607 2.1.3.3 0.00000000000000000000000000000000000000000000000000000000000000000000000005767 269.0
DYD2_k127_1403132_2 - - - - 0.0000000000000000000000000000000000000000000000000000000000005239 241.0
DYD2_k127_1403132_3 Amino acid kinase family K00926 - 2.7.2.2 0.00000000000000000000000000000000000000000000000000000007308 207.0
DYD2_k127_1403132_4 TIGRFAM HAD-superfamily hydrolase, subfamily IA, variant K07025 - - 0.0000000000000000000000004429 114.0
DYD2_k127_1403132_5 gluconolactonase activity K01406,K14274,K20276,K21449 - 3.4.24.40 0.000000000000000000000086 116.0
DYD2_k127_1403132_6 Golgi phosphoprotein 3 (GPP34) - - - 0.0000002047 63.0
DYD2_k127_1418846_0 Catalyzes the formation of pyridoxal 5'-phosphate from ribose 5-phosphate (RBP), glyceraldehyde 3-phosphate (G3P) and ammonia. The ammonia is provided by the PdxT subunit. Can also use ribulose 5-phosphate and dihydroxyacetone phosphate as substrates, resulting from enzyme-catalyzed isomerization of RBP and G3P, respectively K06215 - 4.3.3.6 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001278 403.0
DYD2_k127_1418846_1 Required for the formation of a threonylcarbamoyl group on adenosine at position 37 (t(6)A37) in tRNAs that read codons beginning with adenine K07566 - 2.7.7.87 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000006575 290.0
DYD2_k127_1418846_2 helicase superfamily c-terminal domain K11927 - 3.6.4.13 0.000000000000000000000000000000000000000000000000000000000000000000000322 250.0
DYD2_k127_1418846_3 Catalyzes the conversion of N5-carboxyaminoimidazole ribonucleotide (N5-CAIR) to 4-carboxy-5-aminoimidazole ribonucleotide (CAIR) K01588 - 5.4.99.18 0.0000000000000000000000000000000000002443 151.0
DYD2_k127_1418846_4 Protein of unknown function (DUF531) K09725 - - 0.00000000000000000000000002639 125.0
DYD2_k127_1418846_5 COG3806 Anti-sigma factor - - - 0.0000003261 59.0
DYD2_k127_1498741_0 Catalyzes the transfer of a formyl group from 10- formyltetrahydrofolate to 5-phospho-ribosyl-glycinamide (GAR), producing 5-phospho-ribosyl-N-formylglycinamide (FGAR) and tetrahydrofolate K11175 - 2.1.2.2 0.0000000000000000000000000000000000000000000000000008459 191.0
DYD2_k127_1498741_1 Mur ligase middle domain K11754 - 6.3.2.12,6.3.2.17 0.0000000000000000000000000000000000000006101 155.0
DYD2_k127_1558157_0 Responsible for synthesis of pseudouridine from uracil- 54 and uracil-55 in the psi GC loop of transfer RNAs K07583 - 5.4.99.25 0.000000000000000000000000000000000000000000000000000000000000000000000000001012 270.0
DYD2_k127_1558157_1 membrane transporter protein K07090 - - 0.0000000000000000000000000000000001673 139.0
DYD2_k127_1558157_2 PFAM Uncharacterised protein family UPF0150 - - - 0.0000000000003698 73.0
DYD2_k127_1558157_3 HicA toxin of bacterial toxin-antitoxin, - - - 0.00000003729 57.0
DYD2_k127_1596481_0 Produces ATP from ADP in the presence of a proton gradient across the membrane. The archaeal alpha chain is a catalytic subunit K02117 - 3.6.3.14,3.6.3.15 2.143e-259 812.0
DYD2_k127_1596481_1 Produces ATP from ADP in the presence of a proton gradient across the membrane. The archaeal beta chain is a regulatory subunit K02118 - - 8.296e-229 716.0
DYD2_k127_1596481_2 Domain of unknown function (DUF4385) - - - 0.0000000000000000000000000000000000000000000116 169.0
DYD2_k127_1596481_3 Segregation and condensation complex subunit ScpB K06024 - - 0.00000000000000000000000000000009997 135.0
DYD2_k127_1596481_4 Protein of unknown function DUF86 - - - 0.0000000000000001729 88.0
DYD2_k127_1596481_5 Nucleotidyltransferase domain K07075 - - 0.000000000000006021 82.0
DYD2_k127_1596481_6 Toxic component of a toxin-antitoxin (TA) module. An RNase - - - 0.000000000001424 74.0
DYD2_k127_1596481_7 nucleic acid-binding protein contains PIN domain - - - 0.000000003085 63.0
DYD2_k127_1599761_0 phosphoglucomutase phosphomannomutase alpha beta alpha domain I K15778 - 5.4.2.2,5.4.2.8 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003043 356.0
DYD2_k127_1599761_1 - - - - 0.0000000000000000001741 92.0
DYD2_k127_162293_0 NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient. This subunit may bind ubiquinone K00337 GO:0003674,GO:0003824,GO:0003954,GO:0008137,GO:0008150,GO:0008152,GO:0016491,GO:0016651,GO:0016655,GO:0050136,GO:0055114 1.6.5.3 0.00000000000000000000000000000000000000000000000000000000000000000000002635 251.0
DYD2_k127_162293_1 4Fe-4S dicluster domain K00338 - 1.6.5.3 0.00000000000000000000000000000238 127.0
DYD2_k127_162293_2 NADH ubiquinone oxidoreductase subunit 11 or 4L (Chain K) K00340 - 1.6.5.3 0.000000000000000000000004521 111.0
DYD2_k127_162293_3 PFAM NADH-ubiquinone plastoquinone oxidoreductase chain 6 K00339 - 1.6.5.3 0.000003976 53.0
DYD2_k127_162293_4 Belongs to the complex I subunit 6 family K00339,K05578 - 1.6.5.3 0.0002042 49.0
DYD2_k127_1631387_0 Specifically catalyzes the NAD or NADP-dependent dehydrogenation of L-aspartate to iminoaspartate K06989 - 1.4.1.21 0.0000000000000000000000000000000000000000000000000000000001061 216.0
DYD2_k127_1631387_1 Enoyl-CoA hydratase/isomerase K15866 - 5.3.3.18 0.0000000000000000000000000000000000000000002238 179.0
DYD2_k127_1631387_2 Belongs to the eukaryotic ribosomal protein eL40 family K02927 - - 0.0002045 45.0
DYD2_k127_1638734_0 phenylalanyl-tRNA synthetase beta subunit K01890 - 6.1.1.20 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001712 346.0
DYD2_k127_1638734_1 Hydroxymethylglutaryl-coenzyme A reductase K00054 - 1.1.1.88 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006158 348.0
DYD2_k127_1638734_2 PFAM Glycosyl transferase family 2 - - - 0.000000000000000000000000000000000000000000000000000000000000000776 226.0
DYD2_k127_1638734_3 Catalyzes the CTP-dependent phosphorylation of riboflavin (vitamin B2) to form flavin mononucleotide (FMN) K07732 - 2.7.1.161 0.00000000000000000000000000000000000000000000000009333 187.0
DYD2_k127_1638734_4 Specifically catalyzes the AdoMet-dependent 2'-O-ribose methylation of cytidine at position 56 in tRNAs K07254 GO:0001510,GO:0002128,GO:0003674,GO:0003824,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006139,GO:0006396,GO:0006399,GO:0006400,GO:0006725,GO:0006807,GO:0008033,GO:0008150,GO:0008152,GO:0008168,GO:0008173,GO:0008175,GO:0009451,GO:0009987,GO:0010467,GO:0016070,GO:0016740,GO:0016741,GO:0030488,GO:0032259,GO:0034470,GO:0034641,GO:0034660,GO:0043170,GO:0043412,GO:0043414,GO:0044237,GO:0044238,GO:0044260,GO:0044424,GO:0044464,GO:0046483,GO:0071704,GO:0090304,GO:0140098,GO:0140101,GO:1901360 2.1.1.206 0.0000000000000000000000000000000000000000000000002059 191.0
DYD2_k127_1638734_5 Specifically catalyzes the AdoMet-dependent 2'-O-ribose methylation of cytidine at position 56 in tRNAs K07254 - 2.1.1.206 0.00000000000000000000000000000001249 134.0
DYD2_k127_1638734_6 Transcription factor that plays a role in the activation of archaeal genes transcribed by RNA polymerase. Facilitates transcription initiation by enhancing TATA-box recognition by TATA-box-binding protein (Tbp), and transcription factor B (Tfb) and RNA polymerase recruitment. Not absolutely required for transcription in vitro, but particularly important in cases where Tbp or Tfb function is not optimal. It dynamically alters the nucleic acid-binding properties of RNA polymerases by stabilizing the initiation complex and destabilizing elongation complexes. Seems to translocate with the RNA polymerase following initiation and acts by binding to the non template strand of the transcription bubble in elongation complexes K03136 - - 0.000000000000005324 87.0
DYD2_k127_1704709_0 malic enzyme K00027 - 1.1.1.38 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001018 556.0
DYD2_k127_1704709_1 Carbon-nitrogen hydrolase K12251 - 3.5.1.53 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004233 389.0
DYD2_k127_1704709_10 Transcriptional regulator, ArsR family - - - 0.000000000000000000000001513 111.0
DYD2_k127_1704709_11 - - - - 0.0001502 50.0
DYD2_k127_1704709_2 Oxidoreductase family, NAD-binding Rossmann fold - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007873 382.0
DYD2_k127_1704709_3 Belongs to the agmatine deiminase family K10536 - 3.5.3.12 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003687 334.0
DYD2_k127_1704709_4 Transketolase, pyridine binding domain protein K00615 - 2.2.1.1 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000005272 296.0
DYD2_k127_1704709_5 Transketolase, thiamine diphosphate binding domain K00615 - 2.2.1.1 0.00000000000000000000000000000000000000000000000000000000000000000000000000000003049 279.0
DYD2_k127_1704709_6 sulfurtransferase K01011 - 2.8.1.1,2.8.1.2 0.00000000000000000000000000000000000000000000000000000000000000000000000000000005248 276.0
DYD2_k127_1704709_7 - - - - 0.000000000000000000000000000000000000000000000000000000007231 211.0
DYD2_k127_1704709_8 Catalyzes the hydrolysis of glutamine to glutamate and ammonia as part of the biosynthesis of pyridoxal 5'-phosphate. The resulting ammonia molecule is channeled to the active site of PdxS K08681 - 4.3.3.6 0.0000000000000000000000000000000000000000000006612 175.0
DYD2_k127_1704709_9 DNA-binding transcription factor activity - - - 0.0000000000000000000000000000002482 128.0
DYD2_k127_1713740_0 CoA binding domain K06929 - - 0.0000000000000000000000000000000195 131.0
DYD2_k127_1715512_0 DEAD DEAH box helicase domain protein K03724 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005749 612.0
DYD2_k127_1715512_1 Could be responsible for synthesis of pseudouridine from uracil-55 in the psi GC loop of transfer RNAs K03177,K11131 - 5.4.99.25 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001618 347.0
DYD2_k127_1715512_10 X-Pro dipeptidyl-peptidase C-terminal non-catalytic domain - - - 0.0000000000000000000000000000000000000001369 171.0
DYD2_k127_1715512_11 Integral membrane protein DUF106 - - - 0.000000000000000000000000000002337 130.0
DYD2_k127_1715512_12 This protein is one of the early assembly proteins of the 50S ribosomal subunit, although it is not seen to bind rRNA by itself. It is important during the early stages of 50S assembly K02871 - - 0.0000000000000000000000000002692 120.0
DYD2_k127_1715512_13 Belongs to the cytidylate kinase family. Type 2 subfamily K00945 - 2.7.4.25 0.00000000000000000000000001171 124.0
DYD2_k127_1715512_14 Belongs to the eukaryotic ribosomal protein eL18 family K02883 - - 0.0000000000000000000005942 98.0
DYD2_k127_1715512_15 HD domain - - - 0.000000000000000002652 89.0
DYD2_k127_1715512_16 Belongs to the low molecular weight phosphotyrosine protein phosphatase family K01104,K03325,K03741,K03892,K18701 - 1.20.4.1,2.8.4.2,3.1.3.48 0.000000000000000003269 88.0
DYD2_k127_1715512_17 Uncharacterised protein family UPF0058 - - - 0.00000000000000001624 87.0
DYD2_k127_1715512_18 RNA polymerases N / 8 kDa subunit K03007 GO:0000428,GO:0003674,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005634,GO:0005654,GO:0005665,GO:0005666,GO:0005730,GO:0005736,GO:0006139,GO:0006351,GO:0006360,GO:0006366,GO:0006383,GO:0006399,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0008270,GO:0009058,GO:0009059,GO:0009304,GO:0009987,GO:0010467,GO:0016070,GO:0016591,GO:0018130,GO:0019438,GO:0030880,GO:0031974,GO:0031981,GO:0032774,GO:0032991,GO:0034641,GO:0034645,GO:0034654,GO:0034660,GO:0042797,GO:0043167,GO:0043169,GO:0043170,GO:0043226,GO:0043227,GO:0043228,GO:0043229,GO:0043231,GO:0043232,GO:0043233,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044271,GO:0044422,GO:0044424,GO:0044428,GO:0044446,GO:0044451,GO:0044452,GO:0044464,GO:0046483,GO:0046872,GO:0046914,GO:0055029,GO:0061695,GO:0070013,GO:0071704,GO:0090304,GO:0097659,GO:0098781,GO:1901360,GO:1901362,GO:1901576,GO:1902494,GO:1990234 - 0.00000000000000006333 83.0
DYD2_k127_1715512_19 Electron transfer flavoprotein domain - - - 0.00000000000004696 83.0
DYD2_k127_1715512_2 PFAM acyl-CoA dehydrogenase domain protein - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008481 338.0
DYD2_k127_1715512_20 Acetyltransferase (GNAT) domain K03789 - 2.3.1.128 0.00000000001414 71.0
DYD2_k127_1715512_21 phosphoesterase RecJ domain protein K07463 - - 0.000000004983 69.0
DYD2_k127_1715512_22 Psort location Cytoplasmic, score K03521,K22431 GO:0000166,GO:0003674,GO:0003824,GO:0005488,GO:0008150,GO:0008152,GO:0016491,GO:0016627,GO:0016628,GO:0036094,GO:0043167,GO:0043168,GO:0048037,GO:0050660,GO:0050662,GO:0055114,GO:0071949,GO:0097159,GO:1901265,GO:1901363 1.3.1.108 0.0000009457 60.0
DYD2_k127_1715512_23 protein conserved in archaea - - - 0.000002783 56.0
DYD2_k127_1715512_24 CAAX protease self-immunity - - - 0.000006103 57.0
DYD2_k127_1715512_25 transcriptional regulators - - - 0.00004497 57.0
DYD2_k127_1715512_3 S-adenosyl-L-methionine-dependent methyltransferase that catalyzes the trimethylation of the amino group of the modified target histidine residue in translation elongation factor 2 (EF- 2), to form an intermediate called diphthine. The three successive methylation reactions represent the second step of diphthamide biosynthesis K20215 GO:0003674,GO:0003824,GO:0004164,GO:0006417,GO:0006448,GO:0006464,GO:0006807,GO:0008150,GO:0008152,GO:0008168,GO:0008757,GO:0009058,GO:0009889,GO:0009987,GO:0010468,GO:0010556,GO:0010608,GO:0016740,GO:0016741,GO:0017182,GO:0017183,GO:0018193,GO:0018202,GO:0019222,GO:0019538,GO:0031323,GO:0031326,GO:0032259,GO:0032268,GO:0034248,GO:0036211,GO:0043170,GO:0043412,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0050789,GO:0050794,GO:0051171,GO:0051246,GO:0060255,GO:0065007,GO:0071704,GO:0080090,GO:1900247,GO:1901564,GO:2000112,GO:2000765 2.1.1.98 0.000000000000000000000000000000000000000000000000000000000000000000006672 242.0
DYD2_k127_1715512_4 Belongs to the enoyl-CoA hydratase isomerase family K01715 - 4.2.1.17 0.0000000000000000000000000000000000000000000000000000000002325 222.0
DYD2_k127_1715512_5 Met-10+ like-protein K15429 - 2.1.1.228 0.000000000000000000000000000000000000000000000000000000006551 212.0
DYD2_k127_1715512_6 adenylate kinase activity K00939 - 2.7.4.3 0.00000000000000000000000000000000000000000000000003895 189.0
DYD2_k127_1715512_7 water channel activity K02440,K06188 - - 0.00000000000000000000000000000000000000000000003123 181.0
DYD2_k127_1715512_8 Forms part of the ribosomal stalk which helps the ribosome interact with GTP-bound translation factors K02867 GO:0000027,GO:0003674,GO:0003676,GO:0003723,GO:0003735,GO:0005198,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005840,GO:0006412,GO:0006518,GO:0006807,GO:0006996,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0016043,GO:0019538,GO:0019843,GO:0022607,GO:0022613,GO:0022618,GO:0032991,GO:0034622,GO:0034641,GO:0034645,GO:0042254,GO:0042255,GO:0042273,GO:0043043,GO:0043170,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043603,GO:0043604,GO:0043933,GO:0044085,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044424,GO:0044444,GO:0044464,GO:0065003,GO:0070925,GO:0071704,GO:0071826,GO:0071840,GO:0097159,GO:1901363,GO:1901564,GO:1901566,GO:1901576,GO:1990904 - 0.000000000000000000000000000000000000000000001442 171.0
DYD2_k127_1715512_9 Belongs to the universal ribosomal protein uS9 family K02996 - - 0.00000000000000000000000000000000000000002839 158.0
DYD2_k127_17267_0 Catalyzes the NAD(P)H-dependent reduction of dihydroxyacetonephosphate (DHAP or glycerone phosphate) to glycerol 1-phosphate (G1P). The G1P thus generated is used as the glycerophosphate backbone of phospholipids in the cellular membranes of Archaea K00096 - 1.1.1.261 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009926 323.0
DYD2_k127_17267_1 Uncharacterised protein family (UPF0179) K09730 - - 0.0000000000000001223 88.0
DYD2_k127_17267_2 Glycosyl transferase 4-like domain K19002 GO:0000287,GO:0003674,GO:0003824,GO:0005488,GO:0006629,GO:0006643,GO:0008150,GO:0008152,GO:0008610,GO:0009058,GO:0009987,GO:0016740,GO:0016757,GO:0016758,GO:0043167,GO:0043169,GO:0044237,GO:0044238,GO:0044249,GO:0044255,GO:0046467,GO:0046872,GO:0071704,GO:1901576 2.4.1.337 0.00000000000002704 76.0
DYD2_k127_1735275_0 Belongs to the class-I aminoacyl-tRNA synthetase family K01869 GO:0003674,GO:0003824,GO:0004812,GO:0004823,GO:0004832,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006082,GO:0006139,GO:0006399,GO:0006412,GO:0006418,GO:0006429,GO:0006438,GO:0006518,GO:0006520,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0016070,GO:0016874,GO:0016875,GO:0019538,GO:0019752,GO:0034641,GO:0034645,GO:0034660,GO:0043038,GO:0043039,GO:0043043,GO:0043170,GO:0043436,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044281,GO:0044424,GO:0044464,GO:0046483,GO:0071704,GO:0090304,GO:0140098,GO:0140101,GO:1901360,GO:1901564,GO:1901566,GO:1901576 6.1.1.4 1.977e-212 700.0
DYD2_k127_1735275_1 Belongs to the Glu Leu Phe Val dehydrogenases family K00261 - 1.4.1.3 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005064 473.0
DYD2_k127_1735275_2 pfam abc - - - 0.000000000000000000000000000000000000000000000000000002788 196.0
DYD2_k127_1735275_3 Two component regulator propeller - - - 0.0000000000000000006642 102.0
DYD2_k127_1735275_4 ParE toxin of type II toxin-antitoxin system, parDE K06218 - - 0.000000003064 60.0
DYD2_k127_1735275_5 Belongs to the Glu Leu Phe Val dehydrogenases family K00261,K00262 - 1.4.1.3,1.4.1.4 0.0000001288 54.0
DYD2_k127_1736375_0 PFAM Phenylalanine and histidine ammonia-lyase K01745,K10775 GO:0003674,GO:0003824,GO:0006082,GO:0006520,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009072,GO:0009698,GO:0009699,GO:0009800,GO:0009803,GO:0009987,GO:0016043,GO:0016053,GO:0016829,GO:0016840,GO:0016841,GO:0019438,GO:0019748,GO:0019752,GO:0022607,GO:0032787,GO:0042537,GO:0043436,GO:0043933,GO:0044085,GO:0044237,GO:0044238,GO:0044249,GO:0044281,GO:0044283,GO:0044550,GO:0045548,GO:0046394,GO:0051259,GO:0051260,GO:0051262,GO:0051289,GO:0065003,GO:0071704,GO:0071840,GO:0072330,GO:1901360,GO:1901362,GO:1901564,GO:1901576 4.3.1.24,4.3.1.3 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007227 504.0
DYD2_k127_1752779_0 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain K00074 - 1.1.1.157 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002023 361.0
DYD2_k127_1752779_1 domain protein K20276 - - 0.000000000000000000000000000000000000000000000000000001701 201.0
DYD2_k127_1752779_2 Belongs to the peptidase S1B family - - - 0.000000000000000000000000002155 125.0
DYD2_k127_1752779_3 Acetyltransferase (GNAT) family - - - 0.00000000000000000000000002717 115.0
DYD2_k127_1752779_4 Thiol-disulfide oxidoreductase DCC - - - 0.0000000000000003139 84.0
DYD2_k127_1752779_5 protein conserved in archaea - - - 0.00000000000000157 89.0
DYD2_k127_1762333_0 AAA-like domain K06915 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005395 428.0
DYD2_k127_1762333_1 Protein of unknown function (DUF357) K09728 - - 0.0000000000000000000000001026 117.0
DYD2_k127_1775820_0 PFAM short-chain dehydrogenase reductase SDR K15314 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002901 522.0
DYD2_k127_1781807_0 Protein of unknown function DUF58 - - - 0.0000000002515 72.0
DYD2_k127_184042_0 Glycosyltransferase family 87 - - - 0.000000000000000000000000000000000396 147.0
DYD2_k127_1840657_0 Catalyzes the formation of the isocyclic ring in chlorophyll biosynthesis. Mediates the cyclase reaction, which results in the formation of divinylprotochlorophyllide (Pchlide) characteristic of all chlorophylls from magnesium-protoporphyrin IX 13-monomethyl ester (MgPMME) - - - 0.00000000000000000000000000000000000000000000000000000000004129 216.0
DYD2_k127_1840657_1 Glycosyl transferases group 1 - - - 0.0000000000000000000000000000000000000000000000000000000001002 227.0
DYD2_k127_1840657_2 Glycosyltransferase Family 4 K00743 - 2.4.1.87 0.0000000000000000000000000000008182 136.0
DYD2_k127_1840657_3 Belongs to the glycosyl hydrolase 5 (cellulase A) family K01179 - 3.2.1.4 0.00002514 51.0
DYD2_k127_1840657_4 COG COG3119 Arylsulfatase A and related enzymes K01133 - 3.1.6.6 0.00002606 52.0
DYD2_k127_1840657_5 - - - - 0.00005576 55.0
DYD2_k127_1912468_0 PFAM fumarate reductase succinate dehydrogenase flavoprotein K00239,K00278 GO:0000104,GO:0000166,GO:0001539,GO:0003674,GO:0003824,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005886,GO:0006091,GO:0006113,GO:0006928,GO:0006950,GO:0006974,GO:0006996,GO:0008150,GO:0008152,GO:0009055,GO:0009061,GO:0009987,GO:0015980,GO:0016020,GO:0016043,GO:0016491,GO:0016627,GO:0022607,GO:0022900,GO:0030030,GO:0030031,GO:0032991,GO:0033554,GO:0036094,GO:0040011,GO:0043167,GO:0043168,GO:0044085,GO:0044237,GO:0044424,GO:0044425,GO:0044444,GO:0044459,GO:0044464,GO:0044780,GO:0044781,GO:0045273,GO:0045274,GO:0045283,GO:0045284,GO:0045333,GO:0048037,GO:0048870,GO:0050660,GO:0050662,GO:0050896,GO:0051179,GO:0051674,GO:0051716,GO:0055114,GO:0070469,GO:0070470,GO:0070925,GO:0071840,GO:0071944,GO:0071949,GO:0071973,GO:0097159,GO:0097588,GO:0098796,GO:0098797,GO:0098803,GO:1901265,GO:1901363 1.3.5.1,1.3.5.4,1.4.3.16 5.791e-240 755.0
DYD2_k127_1912468_1 PFAM PilT protein domain protein K06865 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004799 540.0
DYD2_k127_1912468_2 EamA-like transporter family - - - 0.0000000000000000000000000000000000000000000000000000000000000000009106 244.0
DYD2_k127_1912468_3 membrane - - - 0.000000000000000000000000000000000000000000000000000000000002894 219.0
DYD2_k127_1912468_4 D-aminoacyl-tRNA deacylase with broad substrate specificity. By recycling D-aminoacyl-tRNA to D-amino acids and free tRNA molecules, this enzyme counteracts the toxicity associated with the formation of D-aminoacyl-tRNA entities in vivo K09716 - 3.1.1.96 0.00000000000000000000000000000000006148 148.0
DYD2_k127_1912468_5 Domain of unknown function (DUF4332) - - - 0.00000000000013 84.0
DYD2_k127_1948911_0 Methylmalonyl-CoA mutase K01847,K01848 - 5.4.99.2 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004123 407.0
DYD2_k127_1948911_1 Glycerophosphoryl diester phosphodiesterase K01126 - 3.1.4.46 0.0000000000000000001818 95.0
DYD2_k127_1948911_2 Protein of unknown function DUF86 - - - 0.00000001402 61.0
DYD2_k127_1998894_0 PFAM Thiolase K00626 - 2.3.1.9 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007516 408.0
DYD2_k127_1998894_1 DUF35 OB-fold domain, acyl-CoA-associated K07068 - - 0.00000000000000000000000000000000003786 148.0
DYD2_k127_2005364_0 May function in recognizing stalled ribosomes, interact with stem-loop structures in stalled mRNA molecules, and effect endonucleolytic cleavage of the mRNA. May play a role in the release non-functional ribosomes and degradation of damaged mRNAs. Has endoribonuclease activity K06965 - - 0.000000000000000000000000000000000006718 147.0
DYD2_k127_2028654_0 May play a key role in the regulation of the intracellular concentration of adenosylhomocysteine K01251 - 3.3.1.1 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001046 486.0
DYD2_k127_2028654_1 C-terminal domain of 1-Cys peroxiredoxin K03386 - 1.11.1.15 0.000000000000000000000000000000000000000000000000000000000000000000006039 243.0
DYD2_k127_2028654_2 DEAD-box RNA helicase possibly involved in RNA degradation. Unwinds dsRNA in both 5'- and 3'-directions, has RNA- dependent ATPase activity K05592 GO:0000166,GO:0003674,GO:0003676,GO:0003723,GO:0003724,GO:0003824,GO:0004004,GO:0004386,GO:0005488,GO:0005524,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005886,GO:0006139,GO:0006725,GO:0006807,GO:0006950,GO:0008026,GO:0008144,GO:0008150,GO:0008152,GO:0008186,GO:0009266,GO:0009295,GO:0009409,GO:0009628,GO:0009987,GO:0010501,GO:0016020,GO:0016070,GO:0016462,GO:0016787,GO:0016817,GO:0016818,GO:0016887,GO:0017076,GO:0017111,GO:0030554,GO:0032553,GO:0032555,GO:0032559,GO:0034641,GO:0035639,GO:0036094,GO:0042623,GO:0043167,GO:0043168,GO:0043170,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043590,GO:0044237,GO:0044238,GO:0044424,GO:0044464,GO:0046483,GO:0050896,GO:0070035,GO:0071704,GO:0071944,GO:0090304,GO:0097159,GO:0097367,GO:0140098,GO:1901265,GO:1901360,GO:1901363 3.6.4.13 0.000000000000000000000000000000000000000000000000001888 187.0
DYD2_k127_2028654_3 pfkB family carbohydrate kinase K22026 GO:0000287,GO:0003674,GO:0003824,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005975,GO:0006139,GO:0006725,GO:0006753,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0008906,GO:0009058,GO:0009117,GO:0009165,GO:0009987,GO:0016301,GO:0016310,GO:0016740,GO:0016772,GO:0016773,GO:0018130,GO:0019200,GO:0019205,GO:0019206,GO:0019438,GO:0019637,GO:0034641,GO:0034654,GO:0043167,GO:0043169,GO:0044237,GO:0044238,GO:0044249,GO:0044262,GO:0044271,GO:0044281,GO:0044424,GO:0044464,GO:0046483,GO:0046835,GO:0046872,GO:0055086,GO:0071704,GO:0090407,GO:1901293,GO:1901360,GO:1901362,GO:1901576 2.7.1.213,2.7.1.73 0.000000000000000000000000000000000000006107 160.0
DYD2_k127_2028654_4 alkyl hydroperoxide reductase Thiol specific antioxidant Mal allergen K03564 - 1.11.1.15 0.00000000000000000000000000003504 124.0
DYD2_k127_2028654_5 - - - - 0.00000000000000000001532 98.0
DYD2_k127_2028654_6 - - - - 0.000008618 52.0
DYD2_k127_2028654_7 SMART Parallel beta-helix repeat - - - 0.0004172 53.0
DYD2_k127_2041319_0 Multifunctional RNA-binding protein that recognizes the K-turn motif in ribosomal RNA, the RNA component of RNase P, box H ACA, box C D and box C' D' sRNAs K02936 - - 0.00000000000000000000000000000000005323 137.0
DYD2_k127_2041319_1 PPIases accelerate the folding of proteins. It catalyzes the cis-trans isomerization of proline imidic peptide bonds in oligopeptides K03767,K03768 - 5.2.1.8 0.000000000000000000000000000001149 136.0
DYD2_k127_2041319_2 Belongs to the eukaryotic ribosomal protein eS28 family K02979 GO:0000028,GO:0003674,GO:0003676,GO:0003723,GO:0003735,GO:0005198,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0006139,GO:0006364,GO:0006396,GO:0006725,GO:0006807,GO:0006996,GO:0008150,GO:0008152,GO:0009987,GO:0010467,GO:0015935,GO:0016043,GO:0016070,GO:0016072,GO:0022607,GO:0022613,GO:0022618,GO:0022626,GO:0022627,GO:0030490,GO:0032991,GO:0034470,GO:0034622,GO:0034641,GO:0034660,GO:0042254,GO:0042255,GO:0042274,GO:0043170,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043933,GO:0044085,GO:0044237,GO:0044238,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:0046483,GO:0065003,GO:0070925,GO:0071704,GO:0071826,GO:0071840,GO:0090304,GO:0097159,GO:1901360,GO:1901363,GO:1990904 - 0.0000000000000000000001529 102.0
DYD2_k127_2041319_3 binds to the 23S rRNA K02896 GO:0000027,GO:0003674,GO:0003676,GO:0003723,GO:0003735,GO:0005198,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0006412,GO:0006518,GO:0006807,GO:0006996,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0015934,GO:0016043,GO:0019538,GO:0022607,GO:0022613,GO:0022618,GO:0022625,GO:0022626,GO:0032991,GO:0034622,GO:0034641,GO:0034645,GO:0042254,GO:0042255,GO:0042273,GO:0043043,GO:0043170,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043603,GO:0043604,GO:0043933,GO:0044085,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:0065003,GO:0070925,GO:0071704,GO:0071826,GO:0071840,GO:0097159,GO:1901363,GO:1901564,GO:1901566,GO:1901576,GO:1902626,GO:1990904 - 0.0000000000000004405 79.0
DYD2_k127_2041319_4 Cytochrome C biogenesis protein transmembrane region - - - 0.00000000005142 75.0
DYD2_k127_2041319_5 cellulase activity - - - 0.00002369 57.0
DYD2_k127_2047054_0 PFAM short-chain dehydrogenase reductase SDR K15314 - - 1.029e-198 639.0
DYD2_k127_2058318_0 Scaffold protein Nfu/NifU N terminal - - - 0.0000000000001056 76.0
DYD2_k127_2058318_1 Belongs to the glycosyl hydrolase 5 (cellulase A) family K01179,K19668 GO:0005575,GO:0005576 3.2.1.4,3.2.1.91 0.000002161 60.0
DYD2_k127_2071163_0 Toprim domain K02316 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004323 348.0
DYD2_k127_2074930_0 domain, Protein K03455 - - 0.00000000000000000000000000000000001842 156.0
DYD2_k127_2074930_1 HxlR-like helix-turn-helix - - - 0.000000000000000000000004086 109.0
DYD2_k127_2091652_0 Belongs to the citrate synthase family K01647 - 2.3.3.1 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005158 428.0
DYD2_k127_2091652_1 glycerophosphoryl diester phosphodiesterase K01126 - 3.1.4.46 0.000000000000000004003 87.0
DYD2_k127_2128104_0 Acetyl-CoA acetyltransferase K00626 - 2.3.1.9 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003037 439.0
DYD2_k127_2128104_1 PFAM Aminotransferase class I and II K05825 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001895 411.0
DYD2_k127_2128104_2 GTPase of unknown function C-terminal K06942 - - 0.000000000000000000000000000000000000000000000000000000000000000000000004888 253.0
DYD2_k127_2128104_3 PPIases accelerate the folding of proteins. It catalyzes the cis-trans isomerization of proline imidic peptide bonds in oligopeptides K03768 - 5.2.1.8 0.000000000000000000000000000000000000000000000000001279 187.0
DYD2_k127_2128104_4 Domain of unknown function (DUF1905) - - - 0.0000000000000000000000000001504 117.0
DYD2_k127_2128104_5 Antidote-toxin recognition MazE, bacterial antitoxin - - - 0.000000004317 61.0
DYD2_k127_2128104_6 Pyridoxamine 5'-phosphate oxidase K07005 - - 0.0000001691 59.0
DYD2_k127_2128104_7 protein conserved in archaea - - - 0.000001139 57.0
DYD2_k127_2128104_8 PIN domain - - - 0.00003554 49.0
DYD2_k127_2128104_9 domain protein K14475 - - 0.0001038 55.0
DYD2_k127_2160020_0 Belongs to the class-II aminoacyl-tRNA synthetase family K04567 - 6.1.1.6 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003453 351.0
DYD2_k127_2160020_1 Catalyzes the attachment of tyrosine to tRNA(Tyr) in a two-step reaction tyrosine is first activated by ATP to form Tyr- AMP and then transferred to the acceptor end of tRNA(Tyr) K01866 GO:0003674,GO:0003824,GO:0004812,GO:0004831,GO:0004832,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006082,GO:0006139,GO:0006399,GO:0006412,GO:0006418,GO:0006438,GO:0006518,GO:0006520,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0016070,GO:0016874,GO:0016875,GO:0019538,GO:0019752,GO:0034641,GO:0034645,GO:0034660,GO:0043038,GO:0043039,GO:0043043,GO:0043170,GO:0043436,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044281,GO:0044424,GO:0044464,GO:0046483,GO:0071704,GO:0090304,GO:0140098,GO:0140101,GO:1901360,GO:1901564,GO:1901566,GO:1901576 6.1.1.1 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006837 344.0
DYD2_k127_2160020_10 - - - - 0.00006569 54.0
DYD2_k127_2160020_2 Catalyzes the condensation of para-aminobenzoate (pABA) with 6-hydroxymethyl-7,8-dihydropterin diphosphate (DHPt-PP) to form 7,8-dihydropteroate (H2Pte), the immediate precursor of folate derivatives K00796,K13941 - 2.5.1.15,2.7.6.3 0.00000000000000000000000000000000000000000000000000000000103 211.0
DYD2_k127_2160020_3 Acyltransferase K00655 - 2.3.1.51 0.00000000000000000000000000000000000000000000000000004353 197.0
DYD2_k127_2160020_4 COG3639 ABC-type phosphate phosphonate transport system, permease component K02042 - - 0.0000000000000000000000000000000000000000000001081 182.0
DYD2_k127_2160020_5 Branched-chain amino acid aminotransferase 4-amino-4-deoxychorismate lyase K00826 - 2.6.1.42 0.000000000000000000000000000000000000000005674 168.0
DYD2_k127_2160020_6 - - - - 0.0000000000000000000000000000000000009478 157.0
DYD2_k127_2160020_7 Part of the ABC transporter complex PhnCDE involved in phosphonates import. Responsible for energy coupling to the transport system K02041 - 3.6.3.28 0.00000000000000000000000000000000007885 147.0
DYD2_k127_2160020_8 COG0608 Single-stranded DNA-specific exonuclease K07463 - - 0.00000000000000000000000000004122 133.0
DYD2_k127_2160020_9 negative regulation of tumor necrosis factor (ligand) superfamily member 11 production K06569 GO:0007610,GO:0007635,GO:0008150,GO:0009605,GO:0009607,GO:0009620,GO:0042048,GO:0042221,GO:0043207,GO:0050896,GO:0051704,GO:0051707 - 0.000000000000000000000001737 115.0
DYD2_k127_2167631_0 Binds to the 50S ribosomal subunit and prevents its association with the 30S ribosomal subunit to form the 70S initiation complex K03264 - - 0.0000000000000000000000000000000000000000000000000000000007144 208.0
DYD2_k127_2167631_1 May be involved in maturation of the 30S ribosomal subunit K02966 - - 0.0000000000000000000000000000000000000000000000217 175.0
DYD2_k127_2167631_10 ParE toxin of type II toxin-antitoxin system, parDE K06218 - - 0.000001503 55.0
DYD2_k127_2167631_11 PFAM Ribosomal LX protein K02944 - - 0.0007259 45.0
DYD2_k127_2167631_2 PFAM filamentation induced by cAMP protein Fic - - - 0.0000000000000000000000000177 119.0
DYD2_k127_2167631_3 PFAM Thiamin pyrophosphokinase K00949 - 2.7.6.2 0.000000000000000000001027 103.0
DYD2_k127_2167631_4 Belongs to the PDCD5 family K06875 - - 0.00000000000000007349 86.0
DYD2_k127_2167631_5 Belongs to the ribosomal protein L31e family K02910 - - 0.000000000000002082 85.0
DYD2_k127_2167631_6 Belongs to the eukaryotic ribosomal protein eL39 family K02924 - - 0.000000000002038 68.0
DYD2_k127_2167631_7 Major facilitator Superfamily - - - 0.000000008337 68.0
DYD2_k127_2167631_8 - - - - 0.00000009685 55.0
DYD2_k127_2167631_9 LVIVD repeat - - - 0.0000001039 64.0
DYD2_k127_2171809_0 Belongs to the class-II aminoacyl-tRNA synthetase family. Phe-tRNA synthetase alpha subunit type 2 subfamily K01889 GO:0003674,GO:0003824,GO:0004812,GO:0004826,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006082,GO:0006139,GO:0006399,GO:0006412,GO:0006418,GO:0006432,GO:0006518,GO:0006520,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0016070,GO:0016874,GO:0016875,GO:0019538,GO:0019752,GO:0034641,GO:0034645,GO:0034660,GO:0043038,GO:0043039,GO:0043043,GO:0043170,GO:0043436,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044281,GO:0044424,GO:0044464,GO:0046483,GO:0071704,GO:0090304,GO:0140098,GO:0140101,GO:1901360,GO:1901564,GO:1901566,GO:1901576 6.1.1.20 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000003373 306.0
DYD2_k127_2171809_1 Catalyzes the reversible phosphorylation of UMP to UDP K09903 - 2.7.4.22 0.0000000000000000000000000000000000002163 152.0
DYD2_k127_2171809_2 Uncharacterized protein containing a Zn-ribbon (DUF2116) - - - 0.0001742 47.0
DYD2_k127_2194520_0 Heat shock 70 kDa protein K04043 - - 1.234e-206 661.0
DYD2_k127_2194520_1 nucleic acid binding protein containing the AN1-type Zn-finger K07059 - - 0.00000000000000000000000000000000005881 143.0
DYD2_k127_2194520_2 RNA-binding protein containing KH domain, possibly ribosomal protein K07574 - - 0.00000000009005 66.0
DYD2_k127_2194520_3 Large family of predicted nucleotide-binding domains K18828 - - 0.00000001941 61.0
DYD2_k127_2194520_4 Part of ribonuclease P, a protein complex that generates mature tRNA molecules by cleaving their 5'-ends K03540 - 3.1.26.5 0.0000000424 61.0
DYD2_k127_2194520_5 Putative antitoxin - - - 0.000729 44.0
DYD2_k127_2208903_0 Catalyzes the radical-mediated insertion of two sulfur atoms into the C-6 and C-8 positions of the octanoyl moiety bound to the lipoyl domains of lipoate-dependent enzymes, thereby converting the octanoylated domains into lipoylated derivatives K03644 GO:0003674,GO:0003824,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005739,GO:0006082,GO:0006464,GO:0006629,GO:0006631,GO:0006633,GO:0006732,GO:0006790,GO:0006807,GO:0008150,GO:0008152,GO:0008610,GO:0009058,GO:0009106,GO:0009107,GO:0009108,GO:0009249,GO:0009987,GO:0010467,GO:0016053,GO:0016740,GO:0016782,GO:0016783,GO:0016992,GO:0018065,GO:0018130,GO:0018193,GO:0018205,GO:0019538,GO:0019752,GO:0032787,GO:0036211,GO:0043170,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0043412,GO:0043436,GO:0044237,GO:0044238,GO:0044249,GO:0044255,GO:0044260,GO:0044267,GO:0044272,GO:0044281,GO:0044283,GO:0044424,GO:0044444,GO:0044464,GO:0046394,GO:0046483,GO:0051186,GO:0051188,GO:0051604,GO:0070283,GO:0071704,GO:0072330,GO:1901360,GO:1901362,GO:1901564,GO:1901576 2.8.1.8 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003389 371.0
DYD2_k127_2208903_1 PAS fold - - - 0.0000000000000000000000000000000000000000000151 182.0
DYD2_k127_2212358_0 membrane transporter protein K07090 - - 0.0000000000000000000000000000000000000000000000000000000000000001611 231.0
DYD2_k127_2212358_1 Removes the 2'-phosphate from RNA via an intermediate in which the phosphate is ADP-ribosylated by NAD followed by a presumed transesterification to release the RNA and generate ADP- ribose 1''-2''-cyclic phosphate (APPR P). May function as an ADP- ribosylase K07559 - - 0.00000000000000000000000000000000000000000000000000000000009331 215.0
DYD2_k127_2212358_2 electron transfer flavoprotein, alpha subunit K03522 - - 0.0000000000000000000000000000000000000000000001122 179.0
DYD2_k127_2212358_3 cheY-homologous receiver domain K02485 - - 0.0000000000000000000000000000000000000000001721 164.0
DYD2_k127_2212358_4 YjgF/chorismate_mutase-like, putative endoribonuclease - - - 0.00000000000000000000000000000000001244 143.0
DYD2_k127_2212358_5 Electron transfer flavoprotein K03521 - - 0.0000000000000000000000000001193 125.0
DYD2_k127_2212358_7 protein conserved in archaea - - - 0.000000000002862 76.0
DYD2_k127_2212358_8 - - - - 0.0000000006397 68.0
DYD2_k127_2254158_0 The UvrABC repair system catalyzes the recognition and processing of DNA lesions. UvrA is an ATPase and a DNA-binding protein. A damage recognition complex composed of 2 UvrA and 2 UvrB subunits scans DNA for abnormalities. When the presence of a lesion has been verified by UvrB, the UvrA molecules dissociate K03701 - - 0.0 1156.0
DYD2_k127_2254158_1 Involved in regulation of DNA replication K10725 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008254 482.0
DYD2_k127_2254158_10 binds to the 23S rRNA K02885 - - 0.000000000000000000000000000000000001012 149.0
DYD2_k127_2254158_11 Ribosomal protein L30 K02907 - - 0.00000000000000000000000000002351 122.0
DYD2_k127_2254158_12 One of two assembly initiator proteins, it binds directly to the 5'-end of the 23S rRNA, where it nucleates assembly of the 50S subunit K02895 - - 0.00000000000000000000000000018 122.0
DYD2_k127_2254158_13 One of the primary rRNA binding proteins, it binds specifically to the 5'-end of 16S ribosomal RNA K02961 - - 0.0000000000000000000000002221 113.0
DYD2_k127_2254158_14 protein conserved in archaea - - - 0.000000000001371 76.0
DYD2_k127_2254158_15 Part of ribonuclease P, a protein complex that generates mature tRNA molecules by cleaving their 5'-ends K03538 - 3.1.26.5 0.000000006172 61.0
DYD2_k127_2254158_16 Binds 16S rRNA, required for the assembly of 30S particles K02954 - - 0.000000007517 66.0
DYD2_k127_2254158_2 With S4 and S12 plays an important role in translational accuracy K02988 GO:0003674,GO:0003735,GO:0005198,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0006412,GO:0006518,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0015935,GO:0019538,GO:0022626,GO:0022627,GO:0032991,GO:0034641,GO:0034645,GO:0043043,GO:0043170,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:0071704,GO:1901564,GO:1901566,GO:1901576,GO:1990904 - 0.000000000000000000000000000000000000000000000000000000000000000000000000004702 263.0
DYD2_k127_2254158_3 Belongs to the eukaryotic ribosomal protein eS4 family K02987 - - 0.00000000000000000000000000000000000000000000000000000000005922 212.0
DYD2_k127_2254158_4 This is 1 of the proteins that binds and probably mediates the attachment of the 5S RNA into the large ribosomal subunit, where it forms part of the central protuberance. In the 70S ribosome it contacts protein S13 of the 30S subunit (bridge B1b), connecting the 2 subunits K02931 - - 0.000000000000000000000000000000000000000000000000000000009677 204.0
DYD2_k127_2254158_5 This protein binds to the 23S rRNA, and is important in its secondary structure. It is located near the subunit interface in the base of the L7 L12 stalk, and near the tRNA binding site of the peptidyltransferase center K02933 GO:0002181,GO:0003674,GO:0003676,GO:0003723,GO:0003735,GO:0005198,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0006412,GO:0006518,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0015934,GO:0019538,GO:0022625,GO:0022626,GO:0032991,GO:0034641,GO:0034645,GO:0043043,GO:0043170,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:0071704,GO:0097159,GO:1901363,GO:1901564,GO:1901566,GO:1901576,GO:1990904 - 0.00000000000000000000000000000000000000000000000002952 184.0
DYD2_k127_2254158_6 Binds to 23S rRNA. Forms part of two intersubunit bridges in the 70S ribosome K02874 GO:0003674,GO:0003676,GO:0003723,GO:0003735,GO:0005198,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0015934,GO:0019843,GO:0022625,GO:0022626,GO:0032991,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:0070180,GO:0097159,GO:1901363,GO:1990904 - 0.0000000000000000000000000000000000000000000000006097 181.0
DYD2_k127_2254158_7 One of the primary rRNA binding proteins, it binds directly to 16S rRNA central domain where it helps coordinate assembly of the platform of the 30S subunit K02994 GO:0003674,GO:0003735,GO:0005198,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0015935,GO:0022626,GO:0022627,GO:0032991,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:1990904 - 0.00000000000000000000000000000000000000000000001457 173.0
DYD2_k127_2254158_8 This is one of the proteins that binds and probably mediates the attachment of the 5S RNA into the large ribosomal subunit, where it forms part of the central protuberance K02881 - - 0.000000000000000000000000000000000000000009097 159.0
DYD2_k127_2254158_9 structural constituent of ribosome K02912 - - 0.00000000000000000000000000000000000002444 152.0
DYD2_k127_2264688_0 Transglutaminase-like superfamily - - - 0.000000000005445 80.0
DYD2_k127_2272853_0 Prenyltransferase that catalyzes the transfer of the geranylgeranyl moiety of geranylgeranyl diphosphate (GGPP) to the C3 hydroxyl of sn-glycerol-1-phosphate (G1P). This reaction is the first ether-bond-formation step in the biosynthesis of archaeal membrane lipids K17104 GO:0000107,GO:0003674,GO:0003824,GO:0016740,GO:0016757,GO:0016763 2.5.1.41 0.00000000000000000000000000000000000000000000000000000000000000000000000000235 263.0
DYD2_k127_2272853_1 - K00176,K07138 - 1.2.7.3 0.00000000003225 67.0
DYD2_k127_2272853_2 COG3407 Mevalonate pyrophosphate decarboxylase K17942 - 4.1.1.99 0.000000000926 60.0
DYD2_k127_2272853_3 protein conserved in archaea - - - 0.00000001574 64.0
DYD2_k127_2287264_0 Belongs to the peptidase S16 family K04076 - 3.4.21.53 6.418e-242 770.0
DYD2_k127_2287264_1 Part of the RFC clamp loader complex which loads the PCNA sliding clamp onto DNA K04801 GO:0005575,GO:0005622,GO:0005623,GO:0005657,GO:0005663,GO:0005694,GO:0006139,GO:0006259,GO:0006260,GO:0006261,GO:0006281,GO:0006725,GO:0006807,GO:0006950,GO:0006974,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0032991,GO:0033554,GO:0034641,GO:0034645,GO:0043170,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044422,GO:0044424,GO:0044427,GO:0044446,GO:0044464,GO:0046483,GO:0050896,GO:0051716,GO:0071704,GO:0090304,GO:1901360,GO:1901576 - 0.00000000000000000000000000009122 116.0
DYD2_k127_2287264_2 - - - - 0.000000000000002569 85.0
DYD2_k127_2290895_0 Catalyzes the interconversion of 2-phosphoglycerate and 3-phosphoglycerate K15633 - 5.4.2.12 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005608 502.0
DYD2_k127_2290895_1 Dehydrogenase E1 component K00161,K00166 - 1.2.4.1,1.2.4.4 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003048 371.0
DYD2_k127_2290895_2 Part of the RFC clamp loader complex which loads the PCNA sliding clamp onto DNA K04801 GO:0005575,GO:0005622,GO:0005623,GO:0005657,GO:0005663,GO:0005694,GO:0006139,GO:0006259,GO:0006260,GO:0006261,GO:0006281,GO:0006725,GO:0006807,GO:0006950,GO:0006974,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0032991,GO:0033554,GO:0034641,GO:0034645,GO:0043170,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044422,GO:0044424,GO:0044427,GO:0044446,GO:0044464,GO:0046483,GO:0050896,GO:0051716,GO:0071704,GO:0090304,GO:1901360,GO:1901576 - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004252 327.0
DYD2_k127_2290895_3 Hydrolyzes RNA 2',3'-cyclic phosphodiester to an RNA 2'- phosphomonoester K01975 GO:0003674,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0008104,GO:0008150,GO:0009966,GO:0010646,GO:0010738,GO:0023051,GO:0033036,GO:0034237,GO:0044424,GO:0044444,GO:0044464,GO:0048583,GO:0050789,GO:0050794,GO:0051018,GO:0051179,GO:0065007,GO:1902531 3.1.4.58 0.000000000003825 76.0
DYD2_k127_2332935_0 Belongs to the class I-like SAM-binding methyltransferase superfamily. RsmB NOP family - GO:0001510,GO:0003674,GO:0003824,GO:0006139,GO:0006396,GO:0006399,GO:0006400,GO:0006725,GO:0006807,GO:0008033,GO:0008150,GO:0008152,GO:0008168,GO:0008173,GO:0008175,GO:0008757,GO:0009451,GO:0009987,GO:0010467,GO:0016070,GO:0016427,GO:0016428,GO:0016740,GO:0016741,GO:0030488,GO:0032259,GO:0034470,GO:0034641,GO:0034660,GO:0043170,GO:0043412,GO:0043414,GO:0044237,GO:0044238,GO:0044260,GO:0046483,GO:0071704,GO:0090304,GO:0140098,GO:0140101,GO:1901360 - 0.0000000000000000000000000000000000000000000000000000000000000004884 232.0
DYD2_k127_2332935_1 Protein involved in ribosomal biogenesis, contains PUA domain K07565 - - 0.00000000000000229 83.0
DYD2_k127_2332935_2 NUDIX domain K03574 - 3.6.1.55 0.0000000002957 72.0
DYD2_k127_2334901_0 Possesses two activities a DNA synthesis (polymerase) and an exonucleolytic activity that degrades single-stranded DNA in the 3' to 5' direction. Has a template-primer preference which is characteristic of a replicative DNA polymerase K02323 - 2.7.7.7 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001386 390.0
DYD2_k127_2334901_1 hydrolase of the alpha beta superfamily K07018 - - 0.000000000000000000000001299 112.0
DYD2_k127_2395239_0 Acyl-CoA dehydrogenase, N-terminal domain K18244 - - 0.0000000000000000000000000000000000000000000000000000000006287 210.0
DYD2_k127_2395239_1 Riboflavin synthase K00793 - 2.5.1.9 0.00000000000000000000000000000000000000000000001402 177.0
DYD2_k127_2395239_2 Catalyzes the formation of 6,7-dimethyl-8- ribityllumazine by condensation of 5-amino-6-(D- ribitylamino)uracil with 3,4-dihydroxy-2-butanone 4-phosphate. This is the penultimate step in the biosynthesis of riboflavin K00794 GO:0000906,GO:0003674,GO:0003824,GO:0005575,GO:0005622,GO:0005623,GO:0006766,GO:0006767,GO:0006771,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009110,GO:0009231,GO:0009987,GO:0016740,GO:0016765,GO:0017144,GO:0018130,GO:0034641,GO:0042364,GO:0042726,GO:0042727,GO:0044237,GO:0044249,GO:0044271,GO:0044281,GO:0044283,GO:0044464,GO:0046483,GO:0071704,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576 2.5.1.78 0.00000000000000000000000001145 125.0
DYD2_k127_2516397_0 acetylornithine aminotransferase K00821 GO:0003674,GO:0005488,GO:0005515,GO:0008144,GO:0008150,GO:0019842,GO:0030170,GO:0036094,GO:0040007,GO:0042802,GO:0043167,GO:0043168,GO:0048037,GO:0050662,GO:0070279,GO:0097159,GO:1901363 2.6.1.11,2.6.1.17 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000214 343.0
DYD2_k127_2516397_1 Belongs to the acetylglutamate kinase family. ArgB subfamily K00930 - 2.7.2.8 0.0000000000000000000000000001582 124.0
DYD2_k127_2533778_0 PFAM AMP-dependent synthetase and ligase K01897 - 6.2.1.3 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003889 493.0
DYD2_k127_2533778_1 Beta-Casp domain K07577 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002012 411.0
DYD2_k127_2533778_10 Ferredoxin - - - 0.000000000000000000000398 113.0
DYD2_k127_2533778_11 HxlR-like helix-turn-helix - - - 0.000000000000008197 82.0
DYD2_k127_2533778_12 Haloacid dehalogenase domain protein hydrolase, type 3 - - - 0.00004401 55.0
DYD2_k127_2533778_13 Polyketide cyclase / dehydrase and lipid transport - - - 0.0002091 50.0
DYD2_k127_2533778_2 Fatty acid desaturase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000001941 302.0
DYD2_k127_2533778_3 Glycosyltransferase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000001387 300.0
DYD2_k127_2533778_4 Mechanosensitive ion channel K03442 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000003755 261.0
DYD2_k127_2533778_5 Catalyzes the reduction of 1-pyrroline-5-carboxylate (PCA) to L-proline K00286 - 1.5.1.2 0.000000000000000000000000000000000000000000000000000000000005979 227.0
DYD2_k127_2533778_6 Domain of unknown function (DUF373) K08975 - - 0.000000000000000000000000000000000000000000000000000000004716 213.0
DYD2_k127_2533778_7 Phosphatase that hydrolyzes non-canonical purine nucleotides such as XTP and ITP to their respective diphosphate derivatives. Probably excludes non-canonical purines from DNA precursor pool, thus preventing their incorporation into DNA and avoiding chromosomal lesions K02201 GO:0003674,GO:0003824,GO:0004140,GO:0006139,GO:0006163,GO:0006164,GO:0006725,GO:0006732,GO:0006753,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009108,GO:0009117,GO:0009150,GO:0009152,GO:0009165,GO:0009259,GO:0009260,GO:0009987,GO:0015936,GO:0015937,GO:0016301,GO:0016310,GO:0016740,GO:0016772,GO:0016773,GO:0018130,GO:0019438,GO:0019637,GO:0019693,GO:0033865,GO:0033866,GO:0033875,GO:0034030,GO:0034032,GO:0034033,GO:0034641,GO:0034654,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0046390,GO:0046483,GO:0051186,GO:0051188,GO:0055086,GO:0071704,GO:0072521,GO:0072522,GO:0090407,GO:1901135,GO:1901137,GO:1901293,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576 2.7.7.3 0.000000000000000000000000000000000000000000000000001326 205.0
DYD2_k127_2533778_8 Catalyzes the transfer of diphosphate from ATP to 6- hydroxymethyl-7,8-dihydropterin (6-HMD), leading to 6- hydroxymethyl-7,8-dihydropterin diphosphate (6-HMDP) K07142 - 2.7.6.3 0.0000000000000000000000000000000000003605 149.0
DYD2_k127_2533778_9 glyoxalase bleomycin resistance protein dioxygenase K06996 - - 0.00000000000000000000000000000006044 130.0
DYD2_k127_2549321_0 Tryptophan 2,3-dioxygenase K00453 GO:0003674,GO:0003824,GO:0004833,GO:0005488,GO:0006082,GO:0006520,GO:0006568,GO:0006569,GO:0006576,GO:0006586,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0009056,GO:0009063,GO:0009072,GO:0009074,GO:0009308,GO:0009310,GO:0009987,GO:0016043,GO:0016054,GO:0016491,GO:0016701,GO:0016702,GO:0019439,GO:0019441,GO:0019752,GO:0020037,GO:0022607,GO:0034641,GO:0042180,GO:0042402,GO:0042430,GO:0042436,GO:0042537,GO:0043436,GO:0043933,GO:0044085,GO:0044106,GO:0044237,GO:0044238,GO:0044248,GO:0044270,GO:0044281,GO:0044282,GO:0046218,GO:0046395,GO:0046483,GO:0046700,GO:0046906,GO:0048037,GO:0051213,GO:0051259,GO:0051260,GO:0051262,GO:0051289,GO:0055114,GO:0065003,GO:0070189,GO:0071704,GO:0071840,GO:0097159,GO:1901360,GO:1901361,GO:1901363,GO:1901564,GO:1901565,GO:1901575,GO:1901605,GO:1901606 1.13.11.11 0.0000000000000000000000000000000000000000000000007574 184.0
DYD2_k127_2549321_1 tRNA methyltransferase complex GCD14 subunit K07442 - 2.1.1.219,2.1.1.220 0.000000000000000000000000000000000000000009264 166.0
DYD2_k127_2549321_2 PFAM cytochrome c oxidase, subunit III K02276,K02299 - 1.9.3.1 0.0000000000000000000000000000143 120.0
DYD2_k127_2549321_3 Molecular chaperone capable of stabilizing a range of proteins. Seems to fulfill an ATP-independent, HSP70-like function in archaeal de novo protein folding K04798 - - 0.0000000000001412 80.0
DYD2_k127_2557610_0 Carbamoyl-phosphate synthetase large chain, oligomerisation K01955 - 6.3.5.5 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001312 619.0
DYD2_k127_2557610_1 Belongs to the UPF0434 family - - - 0.000000000007035 78.0
DYD2_k127_2557610_2 phosphorelay signal transduction system - - - 0.00001442 55.0
DYD2_k127_2584767_0 Resolvase, N terminal domain - - - 0.0000000000000000000000000000000000000000000000000000000000000007303 226.0
DYD2_k127_2584767_1 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase - - - 0.00000000000000000000000000000000000000000000000003632 196.0
DYD2_k127_2584767_2 Catalyzes the transfer of endogenously produced octanoic acid from octanoyl-acyl-carrier-protein onto the lipoyl domains of lipoate-dependent enzymes. Lipoyl-ACP can also act as a substrate although octanoyl-ACP is likely to be the physiological substrate K03801 GO:0006464,GO:0006807,GO:0008150,GO:0008152,GO:0009249,GO:0009987,GO:0010467,GO:0018065,GO:0018193,GO:0018205,GO:0019538,GO:0036211,GO:0043170,GO:0043412,GO:0044237,GO:0044238,GO:0044260,GO:0044267,GO:0051604,GO:0071704,GO:1901564 2.3.1.181 0.00000000000000000000000000000000000000000000000242 183.0
DYD2_k127_2584767_3 esterase of the alpha-beta hydrolase superfamily - - - 0.00000000000000000000000000002852 128.0
DYD2_k127_2584767_4 Bacterial regulatory protein, Fis family - - - 0.0000002391 63.0
DYD2_k127_2584767_5 helix_turn_helix ASNC type - - - 0.000314 51.0
DYD2_k127_2584767_6 protein conserved in archaea - - - 0.0004057 51.0
DYD2_k127_2609927_0 Radical_SAM C-terminal domain K07739 GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0044424,GO:0044464 2.3.1.48 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001298 409.0
DYD2_k127_2609927_1 COG0537 Diadenosine tetraphosphate (Ap4A) hydrolase and other HIT family hydrolases K02503 - - 0.00000000000000000000000000000000000005775 147.0
DYD2_k127_2609927_2 potassium uptake protein TrkH K03498 - - 0.000000000000000000000000000000006198 134.0
DYD2_k127_2609927_3 Thioesterase-like superfamily K07107 - - 0.000000000000000000000003004 108.0
DYD2_k127_2624181_0 ATPase family associated with various cellular activities (AAA) K03924 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006373 365.0
DYD2_k127_2624181_1 Protein of unknown function DUF58 - - - 0.0000000000000000000000000000000004652 147.0
DYD2_k127_2658611_0 Thiolase, N-terminal domain K00626 - 2.3.1.9 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006131 394.0
DYD2_k127_2658611_1 FAD linked oxidases, C-terminal domain - - - 0.000000000000000000003712 107.0
DYD2_k127_2658611_2 - - - - 0.00000000000001901 81.0
DYD2_k127_2658611_3 Rubredoxin-like zinc ribbon domain (DUF35_N) K07068 - - 0.00000009356 60.0
DYD2_k127_2711331_0 cyanophycin synthetase K03802 - 6.3.2.29,6.3.2.30 1.047e-265 845.0
DYD2_k127_2711331_1 Belongs to the phosphoglycerate kinase family K00927,K01803 - 2.7.2.3,5.3.1.1 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001705 486.0
DYD2_k127_2711331_10 PFAM Pre-mRNA processing ribonucleoprotein, binding K14564 - - 0.000000000000000000000000000000000000000000000000002396 198.0
DYD2_k127_2711331_11 Multicopper oxidase K22348 - 1.16.3.3 0.0000000000000000000000000000000000000000000004715 185.0
DYD2_k127_2711331_12 Involved in pre-rRNA and tRNA processing. Utilizes the methyl donor S-adenosyl-L-methionine to catalyze the site-specific 2'-hydroxyl methylation of ribose moieties in rRNA and tRNA. Site specificity is provided by a guide RNA that base pairs with the substrate. Methylation occurs at a characteristic distance from the sequence involved in base pairing with the guide RNA K04795 - - 0.000000000000000000000000000000000000000000001789 183.0
DYD2_k127_2711331_13 Mannose-6-phosphate isomerase K01809 - 5.3.1.8 0.0000000000000000000004974 100.0
DYD2_k127_2711331_14 PRC-barrel - - - 0.0000000001987 65.0
DYD2_k127_2711331_15 glycosyl transferase family - - - 0.000004082 56.0
DYD2_k127_2711331_2 Aminotransferase class I and II K00812 - 2.6.1.1 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006616 374.0
DYD2_k127_2711331_3 Belongs to the arginase family K01476 GO:0003674,GO:0003824,GO:0004053,GO:0006082,GO:0006520,GO:0006525,GO:0006807,GO:0008150,GO:0008152,GO:0009064,GO:0009987,GO:0016787,GO:0016810,GO:0016813,GO:0019752,GO:0043436,GO:0044237,GO:0044238,GO:0044281,GO:0071704,GO:1901564,GO:1901605 3.5.3.1 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009781 346.0
DYD2_k127_2711331_4 NAD(P)H-binding K01784 - 5.1.3.2 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001462 337.0
DYD2_k127_2711331_5 Carboxypeptidase regulatory-like domain K07151 - 2.4.99.18 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001708 341.0
DYD2_k127_2711331_6 Catalyzes the conversion of dihydroorotate to orotate K00254,K17828 GO:0003674,GO:0003824,GO:0004152,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006139,GO:0006206,GO:0006207,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009112,GO:0009987,GO:0016491,GO:0016627,GO:0016635,GO:0018130,GO:0019856,GO:0034641,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0044424,GO:0044464,GO:0046112,GO:0046483,GO:0055086,GO:0055114,GO:0071704,GO:0072527,GO:0072528,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576 1.3.1.14,1.3.5.2 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000001223 286.0
DYD2_k127_2711331_7 SMART Peptidase A22, presenilin signal peptide - - - 0.0000000000000000000000000000000000000000000000000000000000000000001308 241.0
DYD2_k127_2711331_8 Peptidase family S51 - - - 0.0000000000000000000000000000000000000000000000000000000000000002075 231.0
DYD2_k127_2711331_9 Asparaginase K01424,K13051 - 3.4.19.5,3.5.1.1 0.00000000000000000000000000000000000000000000000000000000000002566 226.0
DYD2_k127_2730061_0 Component of the proteasome core, a large protease complex with broad specificity involved in protein degradation K03432 GO:0000502,GO:0005575,GO:0005622,GO:0005623,GO:0005839,GO:0019773,GO:0032991,GO:0044424,GO:0044464,GO:1902494,GO:1905368,GO:1905369 3.4.25.1 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000001935 297.0
DYD2_k127_2730061_1 amino acid K03294 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000005044 311.0
DYD2_k127_2730061_2 Catalytic component of the exosome, which is a complex involved in RNA degradation. Has 3'- 5' exoribonuclease activity. Can also synthesize heteropolymeric RNA-tails K11600 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000009566 280.0
DYD2_k127_2730061_3 Non-catalytic component of the exosome, which is a complex involved in RNA degradation. Contributes to the structuring of the Rrp41 active site K12589 GO:0000177,GO:0000178,GO:0003674,GO:0003676,GO:0003723,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006139,GO:0006401,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0009056,GO:0009057,GO:0009987,GO:0016070,GO:0016072,GO:0016075,GO:0017091,GO:0019439,GO:0032991,GO:0034641,GO:0034655,GO:0034660,GO:0034661,GO:0043170,GO:0044237,GO:0044238,GO:0044248,GO:0044260,GO:0044265,GO:0044270,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0046700,GO:0071704,GO:0090304,GO:0097159,GO:1901360,GO:1901361,GO:1901363,GO:1901575,GO:1902494,GO:1905354 - 0.0000000000000000000000000000000000000000000000000000000000000008707 229.0
DYD2_k127_2730061_4 Non-catalytic component of the exosome, which is a complex involved in RNA degradation. Increases the RNA binding and the efficiency of RNA degradation. Confers strong poly(A) specificity to the exosome K03679 GO:0000178,GO:0000288,GO:0000291,GO:0000459,GO:0000460,GO:0000466,GO:0000467,GO:0000469,GO:0000956,GO:0003674,GO:0003676,GO:0003723,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0006139,GO:0006364,GO:0006396,GO:0006401,GO:0006402,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0009056,GO:0009057,GO:0009892,GO:0009987,GO:0010467,GO:0010468,GO:0010605,GO:0010629,GO:0016070,GO:0016071,GO:0016072,GO:0016073,GO:0016074,GO:0016180,GO:0019222,GO:0019439,GO:0022613,GO:0031123,GO:0031125,GO:0031126,GO:0032991,GO:0034470,GO:0034472,GO:0034475,GO:0034641,GO:0034655,GO:0034660,GO:0034661,GO:0042254,GO:0043144,GO:0043170,GO:0043628,GO:0043928,GO:0044085,GO:0044237,GO:0044238,GO:0044248,GO:0044260,GO:0044265,GO:0044270,GO:0044424,GO:0044464,GO:0046483,GO:0046700,GO:0048519,GO:0050789,GO:0060255,GO:0065007,GO:0071034,GO:0071043,GO:0071051,GO:0071704,GO:0071840,GO:0090304,GO:0090305,GO:0090501,GO:0090503,GO:0097159,GO:1901360,GO:1901361,GO:1901363,GO:1901575,GO:1902494,GO:1905354 - 0.00000000000000000000000000000000000000000000000000000004438 215.0
DYD2_k127_2730061_5 Shwachman-Bodian-Diamond syndrome (SBDS) protein K14574 - - 0.000000000000000000000000000000000000000000000000000001662 211.0
DYD2_k127_2730061_6 Nucleotidyl transferase K00966 - 2.7.7.13 0.000000000000000000000000000005457 127.0
DYD2_k127_2730061_7 domain protein K20276 - - 0.0000000000000000000003512 100.0
DYD2_k127_2730061_8 PRC-barrel domain - - - 0.00000000000000034 81.0
DYD2_k127_2819989_0 Peptidase, M61 - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006756 354.0
DYD2_k127_2819989_1 Peptidase family M20/M25/M40 K01438,K05831 - 3.5.1.16 0.0000000000000000000000000000000000000000000000000000000000000000000004833 252.0
DYD2_k127_2819989_2 Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family K00818 GO:0003008,GO:0003674,GO:0003824,GO:0003992,GO:0004587,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005634,GO:0005654,GO:0005737,GO:0005739,GO:0005759,GO:0006082,GO:0006520,GO:0006525,GO:0006526,GO:0006536,GO:0006538,GO:0006591,GO:0006592,GO:0006807,GO:0007600,GO:0007601,GO:0008144,GO:0008150,GO:0008152,GO:0008483,GO:0008652,GO:0009056,GO:0009058,GO:0009063,GO:0009064,GO:0009065,GO:0009084,GO:0009987,GO:0016043,GO:0016053,GO:0016054,GO:0016740,GO:0016769,GO:0019752,GO:0019842,GO:0022607,GO:0030170,GO:0031974,GO:0031981,GO:0032501,GO:0034214,GO:0036094,GO:0042450,GO:0042802,GO:0043167,GO:0043168,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0043233,GO:0043436,GO:0043648,GO:0043649,GO:0043933,GO:0044085,GO:0044237,GO:0044238,GO:0044248,GO:0044249,GO:0044281,GO:0044282,GO:0044283,GO:0044422,GO:0044424,GO:0044428,GO:0044429,GO:0044444,GO:0044446,GO:0044464,GO:0046394,GO:0046395,GO:0048037,GO:0050662,GO:0050877,GO:0050953,GO:0051259,GO:0065003,GO:0070013,GO:0070279,GO:0071704,GO:0071840,GO:0097159,GO:1901363,GO:1901564,GO:1901565,GO:1901566,GO:1901575,GO:1901576,GO:1901605,GO:1901606,GO:1901607 2.6.1.11 0.0002964 44.0
DYD2_k127_2860605_0 AAA domain - - - 0.00000000000000000000000000000000000000000000000000001604 217.0
DYD2_k127_2878478_0 Possesses two activities a DNA synthesis (polymerase) and an exonucleolytic activity that degrades single-stranded DNA in the 3'- to 5'-direction. Has a template-primer preference which is characteristic of a replicative DNA polymerase K02322 GO:0003674,GO:0005488,GO:0005515,GO:0042802 2.7.7.7 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001724 410.0
DYD2_k127_2878478_1 Involved in base excision repair of DNA damaged by oxidation or by mutagenic agents. Acts as DNA glycosylase that recognizes and removes damaged bases. Has a preference for oxidized purines, such as 7,8-dihydro-8-oxoguanine (8-oxoG). Has AP (apurinic apyrimidinic) lyase activity and introduces nicks in the DNA strand. Cleaves the DNA backbone by beta-delta elimination to generate a single-strand break at the site of the removed base with both 3'- and 5'-phosphates K10563 - 3.2.2.23,4.2.99.18 0.000000000000000000000000000000000000000000000000000000000000000005424 238.0
DYD2_k127_2878478_2 2Fe-2S iron-sulfur cluster binding domain K00302 - 1.5.3.1 0.0000000000000000000000000000000000000000000000000000007001 208.0
DYD2_k127_2880273_0 This protein promotes the GTP-dependent binding of aminoacyl-tRNA to the A-site of ribosomes during protein biosynthesis K03231 GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0044424,GO:0044464 - 0.000000000000000000000000000000000000000000000000000000000000000000000000002765 254.0
DYD2_k127_2880273_1 membrane - - - 0.000000001909 68.0
DYD2_k127_2880273_2 Transmembrane exosortase (Exosortase_EpsH) - - - 0.00000327 59.0
DYD2_k127_2884874_0 Belongs to the LDH MDH superfamily K00024 GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0044424,GO:0044464 1.1.1.37 0.00000000000000000000000000000000000000000000000000000000000000000000000001359 262.0
DYD2_k127_2884874_1 COG2301 Citrate lyase beta subunit K01644 - 4.1.3.34 0.0000000000000000000000000000000000000000000000004133 186.0
DYD2_k127_2884874_2 dehydratase - - - 0.000000000000000000000000000000000000002386 161.0
DYD2_k127_2884874_3 Polyprenyl synthetase K00805 - 2.5.1.30 0.00000000000000000000000000000000000002516 159.0
DYD2_k127_2884874_4 Thymidylate kinase K00943 GO:0003674,GO:0003824,GO:0004798,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006139,GO:0006220,GO:0006221,GO:0006227,GO:0006233,GO:0006235,GO:0006725,GO:0006753,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0009041,GO:0009058,GO:0009117,GO:0009123,GO:0009132,GO:0009133,GO:0009138,GO:0009139,GO:0009141,GO:0009142,GO:0009147,GO:0009148,GO:0009165,GO:0009186,GO:0009189,GO:0009196,GO:0009197,GO:0009200,GO:0009202,GO:0009211,GO:0009212,GO:0009219,GO:0009221,GO:0009262,GO:0009263,GO:0009265,GO:0009394,GO:0009987,GO:0016301,GO:0016310,GO:0016740,GO:0016772,GO:0016776,GO:0018130,GO:0019205,GO:0019438,GO:0019637,GO:0019692,GO:0034641,GO:0034654,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0044424,GO:0044464,GO:0046072,GO:0046075,GO:0046077,GO:0046385,GO:0046483,GO:0046940,GO:0050145,GO:0055086,GO:0071704,GO:0072527,GO:0072528,GO:0090407,GO:1901135,GO:1901137,GO:1901293,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576 2.7.4.9 0.00000000000000000000000003026 121.0
DYD2_k127_2884874_5 transcriptional - - - 0.0000000000000000000003682 110.0
DYD2_k127_2884874_6 ribonuclease activity K07060 - - 0.00000000000000000007824 95.0
DYD2_k127_2884874_7 PFAM PKD domain containing protein - - - 0.0000000000000002357 94.0
DYD2_k127_2884874_8 Belongs to the MenA family. Type 1 subfamily K02548 - 2.5.1.74 0.0000002512 63.0
DYD2_k127_2884874_9 small multidrug export protein - - - 0.0004789 52.0
DYD2_k127_288690_0 Catalyzes the transfer of a methylene group from S-adenosyl-L-methionine to the cis double bond of an unsaturated fatty acid chain resulting in the replacement of the double bond with a methylene bridge K00574 - 2.1.1.79 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006113 419.0
DYD2_k127_288690_1 Belongs to the DEAD box helicase family K05592 - 3.6.4.13 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008772 400.0
DYD2_k127_288690_2 COG1599 Single-stranded DNA-binding replication protein A (RPA), large (70 kD) subunit and related ssDNA-binding proteins K07466 - - 0.0000000000000000000000000000000000000000000000000000000000000000001468 247.0
DYD2_k127_288690_3 protein conserved in archaea K09746 - - 0.0000000000000000000000000000000000000000002722 171.0
DYD2_k127_288690_4 Zinc finger domain K06874 - - 0.000000000000000000000000000000000004944 151.0
DYD2_k127_288690_5 Domain of unknown function (DUF4430) - - - 0.00009259 53.0
DYD2_k127_2892451_0 Contacts the emerging nascent chain on the ribosome K03626 - - 0.0000000000000000006766 96.0
DYD2_k127_2892451_1 Bifunctional enzyme that catalyzes the epimerization of the S- and R-forms of NAD(P)HX and the dehydration of the S-form of NAD(P)HX at the expense of ADP, which is converted to AMP. This allows the repair of both epimers of NAD(P)HX, a damaged form of NAD(P)H that is a result of enzymatic or heat-dependent hydration K17758,K17759 - 4.2.1.136,5.1.99.6 0.000000000000001324 87.0
DYD2_k127_2892451_2 - - - - 0.000000000001737 74.0
DYD2_k127_2892451_3 Pfam Adenylate and Guanylate cyclase catalytic domain - - - 0.00002409 54.0
DYD2_k127_2934963_0 KaiC - - - 0.00000000000000000007705 98.0
DYD2_k127_2934963_1 COG1989 Type II secretory pathway, prepilin signal peptidase PulO and related peptidases K07991 - 3.4.23.52 0.000000000002516 79.0
DYD2_k127_2946993_0 Bifunctional purine biosynthesis protein PurH K00602 - 2.1.2.3,3.5.4.10 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003923 513.0
DYD2_k127_2974210_0 Isocitrate lyase K01637 - 4.1.3.1 1.649e-206 652.0
DYD2_k127_2974210_1 cystathionine K01760,K17217 GO:0000096,GO:0000098,GO:0003674,GO:0003824,GO:0003962,GO:0004123,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006082,GO:0006520,GO:0006790,GO:0006807,GO:0008150,GO:0008152,GO:0008284,GO:0009056,GO:0009063,GO:0009987,GO:0016054,GO:0016740,GO:0016765,GO:0016829,GO:0016846,GO:0019752,GO:0042127,GO:0043418,GO:0043436,GO:0044237,GO:0044238,GO:0044248,GO:0044273,GO:0044281,GO:0044282,GO:0044424,GO:0044464,GO:0046395,GO:0048518,GO:0048522,GO:0050667,GO:0050789,GO:0050794,GO:0065007,GO:0071704,GO:1901564,GO:1901565,GO:1901575,GO:1901605,GO:1901606 4.4.1.1,4.4.1.2,4.4.1.8 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002915 404.0
DYD2_k127_2974210_10 Endonuclease IV plays a role in DNA repair. It cleaves phosphodiester bonds at apurinic or apyrimidinic sites (AP sites) to produce new 5'-ends that are base-free deoxyribose 5-phosphate residues. It preferentially attacks modified AP sites created by bleomycin and neocarzinostatin K01151 GO:0003674,GO:0003824,GO:0003906,GO:0006139,GO:0006259,GO:0006281,GO:0006284,GO:0006725,GO:0006807,GO:0006950,GO:0006974,GO:0008081,GO:0008150,GO:0008152,GO:0009987,GO:0016787,GO:0016788,GO:0033554,GO:0034641,GO:0042578,GO:0043170,GO:0044237,GO:0044238,GO:0044260,GO:0046483,GO:0050896,GO:0051716,GO:0071704,GO:0090304,GO:0140097,GO:1901360 3.1.21.2 0.00000000000000000000000000000000000000000000000000000000000000000000000002648 259.0
DYD2_k127_2974210_11 With LigD forms a non-homologous end joining (NHEJ) DNA repair enzyme, which repairs dsDNA breaks with reduced fidelity. Binds linear dsDNA with 5'- and 3'- overhangs but not closed circular dsDNA nor ssDNA. Recruits and stimulates the ligase activity of LigD K10979 - - 0.00000000000000000000000000000000000000000000000000000000000000000002655 245.0
DYD2_k127_2974210_12 PFAM Glycosyl transferase family 2 - - - 0.000000000000000000000000000000000000000000000000000000000000000002159 255.0
DYD2_k127_2974210_13 DNA polymerase X K02347 - - 0.0000000000000000000000000000000000000000000000000000000000008858 220.0
DYD2_k127_2974210_14 PFAM peptidase M50 - - - 0.0000000000000000000000000000000000000000000000000000006167 211.0
DYD2_k127_2974210_15 PAS domain - - - 0.000000000000000000000000000000000000000000007825 177.0
DYD2_k127_2974210_16 Belongs to the carbohydrate kinase PfkB family K00852 - 2.7.1.15 0.000000000000000000000000005823 123.0
DYD2_k127_2974210_17 Domain of unknown function (DUF2935) - - - 0.000000000000000000000005341 113.0
DYD2_k127_2974210_18 Belongs to the HesB IscA family K13628 - - 0.0000000000000000000000149 104.0
DYD2_k127_2974210_19 Belongs to the UPF0201 family K09736 - - 0.00000001108 62.0
DYD2_k127_2974210_2 Belongs to the glycosyl hydrolase 57 family K07405 - 3.2.1.1 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006874 409.0
DYD2_k127_2974210_20 ACT domain protein - - - 0.000002841 56.0
DYD2_k127_2974210_21 Protein of unknown function (DUF2934) - - - 0.0004509 46.0
DYD2_k127_2974210_22 transcriptional regulators - - - 0.0005274 48.0
DYD2_k127_2974210_3 COG3387 Glucoamylase and related glycosyl hydrolases - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003072 390.0
DYD2_k127_2974210_4 DNA polymerase LigD polymerase domain K01971 - 6.5.1.1 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004009 358.0
DYD2_k127_2974210_5 Catalyzes the phosphorylation of D-fructose 6-phosphate, the first committing step of glycolysis. Uses inorganic phosphate (PPi) as phosphoryl donor instead of ATP like common ATP-dependent phosphofructokinases (ATP-PFKs), which renders the reaction reversible, and can thus function both in glycolysis and gluconeogenesis. Consistently, PPi-PFK can replace the enzymes of both the forward (ATP-PFK) and reverse (fructose-bisphosphatase (FBPase)) reactions K21071 - 2.7.1.11,2.7.1.90 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001807 345.0
DYD2_k127_2974210_6 Cystathionine beta-synthase K01697 - 4.2.1.22 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005687 340.0
DYD2_k127_2974210_7 DNA polymerase Ligase (LigD) K01971 - 6.5.1.1 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000007682 290.0
DYD2_k127_2974210_8 Starch synthase catalytic domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000007745 291.0
DYD2_k127_2974210_9 Binds and transfers iron-sulfur (Fe-S) clusters to target apoproteins. Can hydrolyze ATP K03593 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000003263 276.0
DYD2_k127_2980870_0 This protein promotes the GTP-dependent binding of aminoacyl-tRNA to the A-site of ribosomes during protein biosynthesis K03231 GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0044424,GO:0044464 - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005333 540.0
DYD2_k127_2980870_1 Involved in the binding of tRNA to the ribosomes K02946 - - 0.00000000000000000000000000000000000000000000002871 172.0
DYD2_k127_2980870_2 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase - - - 0.0000315 50.0
DYD2_k127_2980870_3 Nucleic-acid-binding protein containing Zn-ribbon domain (DUF2082) K07069 - - 0.0001093 53.0
DYD2_k127_2980870_4 Nucleic-acid-binding protein containing Zn-ribbon domain (DUF2082) - - - 0.0006003 51.0
DYD2_k127_300534_0 Belongs to the folylpolyglutamate synthase family K11754 - 6.3.2.12,6.3.2.17 0.000000000000000000000000000000000000000000000000000000000000000000000000000000002881 287.0
DYD2_k127_300534_1 Part of a heterotetrameric complex that catalyzes the two-step biosynthesis of anthranilate, an intermediate in the biosynthesis of L-tryptophan. In the first step, the glutamine- binding beta subunit (TrpG) of anthranilate synthase (AS) provides the glutamine amidotransferase activity which generates ammonia as a substrate that, along with chorismate, is used in the second step, catalyzed by the large alpha subunit of AS (TrpE) to produce anthranilate. In the absence of TrpG, TrpE can synthesize anthranilate directly from chorismate and high concentrations of ammonia K01657 - 4.1.3.27 0.000000000000008233 85.0
DYD2_k127_3084088_0 Fumarylacetoacetate (FAA) hydrolase family K16171 - 3.7.1.2 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001214 368.0
DYD2_k127_3084088_1 Catalyzes the oxidation of 5,10- methylenetetrahydrofolate to 5,10-methenyltetrahydrofolate and then the hydrolysis of 5,10-methenyltetrahydrofolate to 10- formyltetrahydrofolate K01491 GO:0003674,GO:0003824,GO:0004477,GO:0004488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006730,GO:0008150,GO:0008152,GO:0009987,GO:0016491,GO:0016645,GO:0016646,GO:0016787,GO:0016810,GO:0016814,GO:0019238,GO:0044237,GO:0044281,GO:0044424,GO:0044444,GO:0044464,GO:0055114 1.5.1.5,3.5.4.9 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000001295 292.0
DYD2_k127_3084088_2 Belongs to the pirin family K06911 - - 0.0000000000000000000000000000000000000000000000002515 180.0
DYD2_k127_3084088_3 HAD-hyrolase-like K01091 - 3.1.3.18 0.00000000000000000001639 102.0
DYD2_k127_3084088_4 histidyl-tRNA synthetase - - - 0.0000000000000006033 88.0
DYD2_k127_3084088_5 but it may be involved in stabilization of the trimeric complex - - - 0.00000223 53.0
DYD2_k127_3099060_0 Domain of unknown function DUF87 K06915,K19172 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003711 344.0
DYD2_k127_3100870_0 AMP-binding enzyme - - - 0.0000000000000002405 88.0
DYD2_k127_3102384_0 PFAM type II secretion system protein E K07332 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001058 524.0
DYD2_k127_3102384_1 Type II secretion system K07333 - - 0.0000000000000000000000000000000000000000001037 176.0
DYD2_k127_3102384_2 Type II secretion system K07333 - - 0.0000000000000000000000000000000000000413 164.0
DYD2_k127_3138924_0 PFAM short-chain dehydrogenase reductase SDR K15314 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002745 346.0
DYD2_k127_3139133_0 intein-mediated protein splicing K00525 - 1.17.4.1 0.0 1167.0
DYD2_k127_3139133_1 Carbamoyl-phosphate synthetase large chain domain protein K01959 - 6.4.1.1 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001071 496.0
DYD2_k127_3139133_2 BioY family K02014,K03523 - - 0.000000000000000259 89.0
DYD2_k127_3139133_3 PFAM biotin lipoyl attachment domain-containing protein K01615,K02160 - 4.1.1.70 0.00000000000001043 84.0
DYD2_k127_3160423_0 PFAM AMP-dependent synthetase and ligase K01897 - 6.2.1.3 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003428 386.0
DYD2_k127_3160423_1 Threonine aldolase K01620 - 4.1.2.48 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005523 338.0
DYD2_k127_3160423_10 PA26 p53-induced protein (sestrin) - - - 0.0000000000000000000000000000000000002565 160.0
DYD2_k127_3160423_11 endonuclease III K01247 - 3.2.2.21 0.0000000000000000000000000000000001161 141.0
DYD2_k127_3160423_12 Protein of unknown function (DUF475) - - - 0.00000000000000000000000000000003559 135.0
DYD2_k127_3160423_13 6-pyruvoyl tetrahydropterin synthase K01737 - 4.1.2.50,4.2.3.12 0.0000000000000000000000000003488 121.0
DYD2_k127_3160423_14 threonine efflux protein - - - 0.0000000000000000000000009107 111.0
DYD2_k127_3160423_15 D,D-heptose 1,7-bisphosphate phosphatase K03273 - 3.1.3.82,3.1.3.83 0.0000000000000000806 92.0
DYD2_k127_3160423_16 PFAM Integral membrane protein TerC family - - - 0.0000000000000003318 89.0
DYD2_k127_3160423_17 Belongs to the eukaryotic ribosomal protein eS17 family K02962 GO:0000028,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0006996,GO:0008150,GO:0009987,GO:0015935,GO:0016043,GO:0022607,GO:0022613,GO:0022618,GO:0022626,GO:0022627,GO:0032991,GO:0034622,GO:0042254,GO:0042255,GO:0042274,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043933,GO:0044085,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:0065003,GO:0070925,GO:0071826,GO:0071840,GO:1990904 - 0.00000000000003336 81.0
DYD2_k127_3160423_2 Converts GTP to 7,8-dihydro-D-neopterin 2',3'-cyclic phosphate, the first intermediate in the biosynthesis of coenzyme methanopterin K17488 GO:0003674,GO:0003824,GO:0003933,GO:0016787,GO:0016810,GO:0016814,GO:0019238,GO:0044682 3.5.4.39 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000001134 290.0
DYD2_k127_3160423_3 Catalyzes the ATP-dependent conversion of 7-carboxy-7- deazaguanine (CDG) to 7-cyano-7-deazaguanine (preQ(0)) K06920 - 6.3.4.20 0.0000000000000000000000000000000000000000000000000000000000000000000000000647 256.0
DYD2_k127_3160423_4 Aldolase/RraA K10218 - 4.1.3.17 0.00000000000000000000000000000000000000000000000000000000000000000000009821 250.0
DYD2_k127_3160423_5 Catalyzes the conversion of D-ribulose 5-phosphate to formate and 3,4-dihydroxy-2-butanone 4-phosphate K02858 GO:0003674,GO:0003824,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006766,GO:0006767,GO:0006771,GO:0006807,GO:0008150,GO:0008152,GO:0008686,GO:0009058,GO:0009110,GO:0009231,GO:0009987,GO:0016829,GO:0016830,GO:0017144,GO:0018130,GO:0034641,GO:0042364,GO:0042726,GO:0042727,GO:0044237,GO:0044249,GO:0044271,GO:0044281,GO:0044283,GO:0044424,GO:0044464,GO:0046483,GO:0071704,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576 4.1.99.12 0.000000000000000000000000000000000000000000000000000000000001575 220.0
DYD2_k127_3160423_6 Catalyzes the complex heterocyclic radical-mediated conversion of 6-carboxy-5,6,7,8-tetrahydropterin (CPH4) to 7- carboxy-7-deazaguanine (CDG), a step common to the biosynthetic pathways of all 7-deazapurine-containing compounds K10026 - 4.3.99.3 0.0000000000000000000000000000000000000000000000000000001667 201.0
DYD2_k127_3160423_7 Catalyzes the transfer of the AMP portion of ATP to flavin mononucleotide (FMN) to produce flavin adenine dinucleotide (FAD) coenzyme K14656 GO:0000166,GO:0001882,GO:0001884,GO:0002135,GO:0003674,GO:0003824,GO:0003919,GO:0005488,GO:0005515,GO:0005524,GO:0006139,GO:0006725,GO:0006732,GO:0006747,GO:0006753,GO:0006793,GO:0006796,GO:0006807,GO:0008144,GO:0008150,GO:0008152,GO:0009058,GO:0009108,GO:0009117,GO:0009123,GO:0009161,GO:0009165,GO:0009259,GO:0009987,GO:0010181,GO:0016740,GO:0016772,GO:0016779,GO:0017076,GO:0018130,GO:0019103,GO:0019438,GO:0019637,GO:0019693,GO:0030554,GO:0032549,GO:0032551,GO:0032553,GO:0032555,GO:0032557,GO:0032559,GO:0034641,GO:0034654,GO:0035639,GO:0036094,GO:0042726,GO:0042727,GO:0042802,GO:0042803,GO:0043167,GO:0043168,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0046443,GO:0046444,GO:0046483,GO:0046983,GO:0048037,GO:0050662,GO:0051186,GO:0051188,GO:0055086,GO:0070566,GO:0071704,GO:0072387,GO:0072388,GO:0090407,GO:0097159,GO:0097367,GO:1901135,GO:1901265,GO:1901293,GO:1901360,GO:1901362,GO:1901363,GO:1901564,GO:1901566,GO:1901576 2.7.7.2 0.0000000000000000000000000000000000000000000000007068 179.0
DYD2_k127_3160423_8 SNARE associated Golgi protein - - - 0.00000000000000000000000000000000000000001469 162.0
DYD2_k127_3160423_9 SET (Su(var)3-9, Enhancer-of-zeste, Trithorax) domain - - - 0.000000000000000000000000000000000000001901 158.0
DYD2_k127_3186619_0 The glycine cleavage system catalyzes the degradation of glycine K00605 - 2.1.2.10 0.0000000000000000000000000000000000000000000000000000000000000000000000000000002122 282.0
DYD2_k127_3186619_1 - - - - 0.0000000184 60.0
DYD2_k127_319912_0 COG0531 Amino acid transporters - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002009 412.0
DYD2_k127_319912_1 TIGRFAM succinate dehydrogenase and fumarate reductase iron-sulfur protein K00240 - 1.3.5.1,1.3.5.4 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000122 345.0
DYD2_k127_319912_2 Has an important function as a repair enzyme for proteins that have been inactivated by oxidation. Catalyzes the reversible oxidation-reduction of methionine sulfoxide in proteins to methionine K07304 - 1.8.4.11 0.0000000000000000000000000000000000000000000000000000000000000000000001577 245.0
DYD2_k127_3249035_0 DNA ligase that seals nicks in double-stranded DNA during DNA replication, DNA recombination and DNA repair K10747 GO:0003674,GO:0003824,GO:0003909,GO:0003910,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006139,GO:0006259,GO:0006260,GO:0006261,GO:0006266,GO:0006271,GO:0006273,GO:0006281,GO:0006725,GO:0006807,GO:0006950,GO:0006974,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0016070,GO:0016874,GO:0016886,GO:0022616,GO:0033554,GO:0034641,GO:0034645,GO:0043170,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044424,GO:0044464,GO:0046483,GO:0050896,GO:0051103,GO:0051716,GO:0071704,GO:0090304,GO:0140097,GO:1901360,GO:1901576 6.5.1.1,6.5.1.6,6.5.1.7 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000003854 291.0
DYD2_k127_3316916_0 abc-type fe3 -hydroxamate transport system, periplasmic component K02016 - - 0.0000000000000000000000000000000000000000000059 172.0
DYD2_k127_3316916_1 lyase activity K01387,K03301 - 3.4.24.3 0.000000000002829 80.0
DYD2_k127_3316916_2 Kelch motif - - - 0.0007219 50.0
DYD2_k127_3346105_0 Thiolase, C-terminal domain K00632 - 2.3.1.16 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008449 323.0
DYD2_k127_3346105_1 - - - - 0.000000000000004307 77.0
DYD2_k127_3357858_0 Involved in the regulation of the intracellular balance of NAD and NADP, and is a key enzyme in the biosynthesis of NADP. Catalyzes specifically the phosphorylation on 2'-hydroxyl of the adenosine moiety of NAD to yield NADP K00858 GO:0000166,GO:0003674,GO:0003824,GO:0003951,GO:0005488,GO:0005524,GO:0006139,GO:0006725,GO:0006732,GO:0006733,GO:0006739,GO:0006741,GO:0006753,GO:0006793,GO:0006796,GO:0006807,GO:0008144,GO:0008150,GO:0008152,GO:0009058,GO:0009108,GO:0009117,GO:0009165,GO:0009987,GO:0016301,GO:0016310,GO:0016311,GO:0016740,GO:0016772,GO:0016773,GO:0016787,GO:0016788,GO:0016791,GO:0017076,GO:0018130,GO:0019178,GO:0019359,GO:0019362,GO:0019363,GO:0019438,GO:0019637,GO:0030554,GO:0032553,GO:0032555,GO:0032559,GO:0034641,GO:0034654,GO:0035639,GO:0036094,GO:0042578,GO:0043167,GO:0043168,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0046483,GO:0046496,GO:0048037,GO:0050662,GO:0051186,GO:0051188,GO:0051287,GO:0055086,GO:0071704,GO:0072524,GO:0072525,GO:0090407,GO:0097159,GO:0097367,GO:1901265,GO:1901293,GO:1901360,GO:1901362,GO:1901363,GO:1901564,GO:1901566,GO:1901576 2.7.1.23 0.0000000000000000000000000000000000000000000000000000000000000000000000000038 274.0
DYD2_k127_3357858_1 Amino acid permease K03294 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000001916 268.0
DYD2_k127_3357858_2 Catalyzes the conversion of D-ribulose 5-phosphate to formate and 3,4-dihydroxy-2-butanone 4-phosphate K14652 GO:0003674,GO:0003824,GO:0003933,GO:0003935,GO:0006766,GO:0006767,GO:0006771,GO:0006807,GO:0008150,GO:0008152,GO:0008686,GO:0009058,GO:0009110,GO:0009231,GO:0009987,GO:0016787,GO:0016810,GO:0016814,GO:0016829,GO:0016830,GO:0017144,GO:0018130,GO:0019238,GO:0034641,GO:0042364,GO:0042726,GO:0042727,GO:0044237,GO:0044249,GO:0044271,GO:0044281,GO:0044283,GO:0046483,GO:0071704,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576 3.5.4.25,4.1.99.12 0.0000000000000000000000000000000000000000000000000000000000000000002028 237.0
DYD2_k127_3357858_3 Nucleolar GTP-binding protein 1 (NOG1) K06943 - - 0.000000000000000000000000000000000000000000000000000000000000000000872 242.0
DYD2_k127_3357858_4 TIGRFAM DNA-directed RNA polymerase K03049 - 2.7.7.6 0.0000000000000000000000000000000000000000000000000000000001346 211.0
DYD2_k127_3357858_5 metal-dependent protease of the PAD1 JAB1 superfamily - - - 0.0000000000000000000000004885 112.0
DYD2_k127_3357858_6 COG0681 Signal peptidase I K13280 - 3.4.21.89 0.000000000000000001124 99.0
DYD2_k127_3357858_7 Transcription elongation factor Spt4 K03050 - 2.7.7.6 0.000000000000006638 75.0
DYD2_k127_3357858_8 protein conserved in archaea - - - 0.000001693 57.0
DYD2_k127_3357858_9 Protein of unknown function (DUF998) - - - 0.00002309 55.0
DYD2_k127_3357926_0 Is involved in the reduction of 2,3- digeranylgeranylglycerophospholipids (unsaturated archaeols) into 2,3-diphytanylglycerophospholipids (saturated archaeols) in the biosynthesis of archaeal membrane lipids. Catalyzes the formation of archaetidic acid (2,3-di-O-phytanyl-sn-glyceryl phosphate) from 2,3-di-O-geranylgeranylglyceryl phosphate (DGGGP) via the hydrogenation of each double bond of the isoprenoid chains K17830 - 1.3.1.101,1.3.7.11 0.00000000000000000000000000000000000000000000000000000000000000000000000000002125 277.0
DYD2_k127_3357926_1 UbiA prenyltransferase family K17105 - 2.5.1.42 0.000000000000000000000000000000259 133.0
DYD2_k127_3359055_0 transcription regulator activity - - - 0.000000000000000000000000000000000000004397 150.0
DYD2_k127_3359055_1 COG3547 Transposase and inactivated derivatives - - - 0.00000000000000000000000000000003733 138.0
DYD2_k127_3359055_2 PrcB C-terminal - - - 0.00003237 53.0
DYD2_k127_3400643_0 COG0553 Superfamily II DNA RNA helicases, SNF2 family - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001201 426.0
DYD2_k127_3400643_1 NAD-dependent glycerol-3-phosphate dehydrogenase C-terminus K00057 - 1.1.1.94 0.000000000000000000000000000000000000000000000000000000000000000000000000000000003356 286.0
DYD2_k127_3400643_2 PFAM RNA-metabolising metallo-beta-lactamase K12574 - - 0.0000000000000000000000000000000000000000000000000000000000000000006829 248.0
DYD2_k127_3400643_3 X-Pro dipeptidyl-peptidase C-terminal non-catalytic domain - - - 0.0000000000000000000000000000205 135.0
DYD2_k127_3400643_4 PPIases accelerate the folding of proteins. It catalyzes the cis-trans isomerization of proline imidic peptide bonds in oligopeptides K03768 - 5.2.1.8 0.00000008224 64.0
DYD2_k127_3408039_0 Plays an important role in the de novo pathway of purine nucleotide biosynthesis. Catalyzes the first committed step in the biosynthesis of AMP from IMP K01939 GO:0003674,GO:0003824,GO:0004019,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006139,GO:0006163,GO:0006164,GO:0006167,GO:0006725,GO:0006753,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009117,GO:0009123,GO:0009124,GO:0009126,GO:0009127,GO:0009150,GO:0009152,GO:0009156,GO:0009161,GO:0009165,GO:0009167,GO:0009168,GO:0009259,GO:0009260,GO:0009987,GO:0016874,GO:0016879,GO:0017144,GO:0018130,GO:0019438,GO:0019637,GO:0019693,GO:0034641,GO:0034654,GO:0044208,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0044424,GO:0044464,GO:0046033,GO:0046040,GO:0046390,GO:0046483,GO:0055086,GO:0071704,GO:0072521,GO:0072522,GO:0090407,GO:1901135,GO:1901137,GO:1901293,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576 6.3.4.4 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004647 430.0
DYD2_k127_3408039_1 HELICc2 K03722,K10844 - 3.6.4.12 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000274 339.0
DYD2_k127_3408039_2 Methionine gamma-lyase K01739,K01758,K01760,K01761 - 2.5.1.48,4.4.1.1,4.4.1.11,4.4.1.8 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009521 315.0
DYD2_k127_3408039_3 Restriction endonuclease K07448 - - 0.000000000000000000000000000000000000000000000000000000000000000000008524 247.0
DYD2_k127_3408039_4 metal-dependent hydrolases related to alanyl-tRNA synthetase HxxxH domain K07050 - - 0.0000000000000000000000000000000000000000000000001963 188.0
DYD2_k127_3408039_5 Rieske-like [2Fe-2S] domain K00363 - 1.7.1.15 0.0000000000005984 79.0
DYD2_k127_3430467_0 PFAM ABC transporter K02003,K02004 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000005619 267.0
DYD2_k127_3430467_1 MacB-like periplasmic core domain K02004 - - 0.00000000000000000000000000000000000000000000000000000000001184 225.0
DYD2_k127_3430467_2 PFAM Radical SAM - - - 0.0000000000000000000000000000000000000007611 164.0
DYD2_k127_3430467_3 Iron permease FTR1 family K07243 - - 0.000000000000000000000000001791 122.0
DYD2_k127_3430467_4 Methyltransferase type 11 - - - 0.00000000000000000006161 97.0
DYD2_k127_3430467_5 COG1361 S-layer domain - - - 0.000000000000000006661 96.0
DYD2_k127_3430467_6 TonB-dependent Receptor Plug Domain K02014,K16088 - - 0.0006451 50.0
DYD2_k127_3449812_0 WD40 repeat-containing protein - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004773 616.0
DYD2_k127_3449812_1 tRNA synthetases class I (W and Y) K01867 GO:0003674,GO:0003824,GO:0004812,GO:0004830,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006082,GO:0006139,GO:0006399,GO:0006412,GO:0006418,GO:0006436,GO:0006518,GO:0006520,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0016070,GO:0016874,GO:0016875,GO:0019538,GO:0019752,GO:0034641,GO:0034645,GO:0034660,GO:0043038,GO:0043039,GO:0043043,GO:0043170,GO:0043436,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044281,GO:0044424,GO:0044464,GO:0046483,GO:0071704,GO:0090304,GO:0140098,GO:0140101,GO:1901360,GO:1901564,GO:1901566,GO:1901576 6.1.1.2 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002451 370.0
DYD2_k127_3449812_2 tRNA intron endonuclease, catalytic C-terminal domain K01170 GO:0000213,GO:0000379,GO:0000394,GO:0003674,GO:0003824,GO:0004518,GO:0004519,GO:0004521,GO:0004540,GO:0004549,GO:0006139,GO:0006388,GO:0006396,GO:0006399,GO:0006725,GO:0006807,GO:0008033,GO:0008150,GO:0008152,GO:0008380,GO:0009987,GO:0010467,GO:0016070,GO:0016787,GO:0016788,GO:0016892,GO:0016894,GO:0034470,GO:0034641,GO:0034660,GO:0043170,GO:0044237,GO:0044238,GO:0046483,GO:0071704,GO:0090304,GO:0090305,GO:0090501,GO:0090502,GO:0140098,GO:0140101,GO:1901360 4.6.1.16 0.00000000000000000000000000000002385 143.0
DYD2_k127_3449812_3 phosphohydrolase (DHH superfamily) K07097 - - 0.000000000000000000000008295 113.0
DYD2_k127_3449812_4 Bulb-type mannose-specific lectin - - - 0.0000000000002967 76.0
DYD2_k127_3449812_5 oxidoreductase activity - - - 0.00002489 57.0
DYD2_k127_3454114_0 Catalyzes the formation of dTDP-glucose, from dTTP and glucose 1-phosphate, as well as its pyrophosphorolysis K00973 - 2.7.7.24 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001715 406.0
DYD2_k127_3454114_1 Male sterility protein K01710 - 4.2.1.46 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000223 352.0
DYD2_k127_3454114_2 Catalyzes the epimerization of the C3' and C5'positions of dTDP-6-deoxy-D-xylo-4-hexulose, forming dTDP-6-deoxy-L-lyxo-4- hexulose K01790 - 5.1.3.13 0.00000000000000000000000000000000000000000000000000000000000002541 223.0
DYD2_k127_3454114_3 Polysaccharide biosynthesis protein K00067 - 1.1.1.133 0.000000000000000000000000000000000000000000000000000000000812 211.0
DYD2_k127_3454114_4 PFAM Glycosyl transferase family 2 - - - 0.000000000000000005091 97.0
DYD2_k127_3476184_0 Catalyzes the reductive methylation of 2'-deoxyuridine- 5'-monophosphate (dUMP) to 2'-deoxythymidine-5'-monophosphate (dTMP) while utilizing 5,10-methylenetetrahydrofolate (mTHF) as the methyl donor, and NADPH and FADH(2) as the reductant - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000005876 289.0
DYD2_k127_3476184_1 RIO1 family K07178 - 2.7.11.1 0.000000000000000000000000000000000000000000000000000001885 207.0
DYD2_k127_3476184_2 K homology RNA-binding domain K06961 - - 0.000000000000000000000000000000000000000000000007132 185.0
DYD2_k127_3476184_3 Seems to be required for maximal rate of protein biosynthesis. Enhances ribosome dissociation into subunits and stabilizes the binding of the initiator Met-tRNA(I) to 40 S ribosomal subunits K03236 - - 0.00000000000000000000000000000000003277 139.0
DYD2_k127_3480471_0 DNA-dependent ATPase and 3'-5' DNA helicase that may be involved in repair of stalled replication forks K03726 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002424 557.0
DYD2_k127_3480471_1 PFAM Acyl-CoA dehydrogenase, C-terminal domain K00248 - 1.3.8.1 0.00000000000000000000000000000000000000000000000000000000000000005033 227.0
DYD2_k127_3480471_2 KEOPS complex Cgi121-like subunit K09119 - - 0.00001318 55.0
DYD2_k127_3480471_3 Copper binding proteins, plastocyanin/azurin family - - - 0.0006811 46.0
DYD2_k127_3493194_0 Belongs to the phosphoglycerate kinase family K00927,K01803 - 2.7.2.3,5.3.1.1 0.000000000000000000000000000000000000000000000000000000000000000000000000000000001046 276.0
DYD2_k127_3493194_1 Beta-lactamase superfamily domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000001678 241.0
DYD2_k127_3516039_0 Essential cell division protein that forms a contractile ring structure (Z ring) at the future cell division site. The regulation of the ring assembly controls the timing and the location of cell division. One of the functions of the FtsZ ring is to recruit other cell division proteins to the septum to produce a new cell wall between the dividing cells. Binds GTP and shows GTPase activity K03531 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003163 475.0
DYD2_k127_3516039_1 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain K00382 - 1.8.1.4 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003163 447.0
DYD2_k127_3516039_2 acetyltransferase component of pyruvate dehydrogenase complex K00627 - 2.3.1.12 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000001233 305.0
DYD2_k127_3573875_0 3-demethylubiquinone-9 3-methyltransferase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000295 309.0
DYD2_k127_3573875_1 Activator of Hsp90 ATPase - - - 0.00000000000000000000000000000000000000000000000000000000006818 210.0
DYD2_k127_3573875_2 glyoxalase K04750 - - 0.0000000000000000000000000000000000192 145.0
DYD2_k127_3573875_3 Activator of Hsp90 ATPase homolog 1-like protein - - - 0.00000000000000000000000000000000002143 148.0
DYD2_k127_3573875_4 transcriptional - - - 0.000000000000000000000000000000001666 134.0
DYD2_k127_3573875_5 HEPN domain K09132 - - 0.0000003625 52.0
DYD2_k127_3614665_0 OPT oligopeptide transporter protein - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008979 507.0
DYD2_k127_3614665_1 COG0006 Xaa-Pro aminopeptidase K01262 - 3.4.11.9 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009588 331.0
DYD2_k127_3614665_2 ABC-2 family transporter protein K09694 - - 0.000000000000000000000000000000000000000001016 163.0
DYD2_k127_3614665_3 Fic/DOC family - - - 0.000000000000000000000000003949 123.0
DYD2_k127_3614665_4 - - - - 0.000392 44.0
DYD2_k127_363000_0 Functions by promoting the formation of the first peptide bond K03263 - - 0.0000000000000000000000000000003232 125.0
DYD2_k127_363000_1 Imidazolone-5-propionate hydrolase K01468 - 3.5.2.7 0.000000006336 59.0
DYD2_k127_3641797_0 Zn-dependent hydrolases of the beta-lactamase fold - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004895 353.0
DYD2_k127_3641797_1 Part of the ABC transporter complex PstSACB involved in phosphate import. Responsible for energy coupling to the transport system K02036 - 3.6.3.27 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001841 323.0
DYD2_k127_3641797_2 probably responsible for the translocation of the substrate across the membrane K02037 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000008863 276.0
DYD2_k127_3641797_3 PFAM extracellular solute-binding protein family 1 K02040 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000004346 262.0
DYD2_k127_3641797_4 Phosphate transport system permease K02038 - - 0.00000000000000000000000000000000000000000000000000000000000000000000007543 252.0
DYD2_k127_3641797_5 Phosphate uptake regulator, PhoU - - - 0.0000000000000000000000000000000000000000000003439 183.0
DYD2_k127_3641797_6 Plays a role in the regulation of phosphate uptake K02039 GO:0003674,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0008150,GO:0009892,GO:0010563,GO:0010966,GO:0019220,GO:0019222,GO:0031323,GO:0031324,GO:0032879,GO:0034762,GO:0034763,GO:0034765,GO:0034766,GO:0042802,GO:0042803,GO:0043269,GO:0043271,GO:0044070,GO:0044424,GO:0044464,GO:0045936,GO:0046983,GO:0048519,GO:0048523,GO:0050789,GO:0050794,GO:0051049,GO:0051051,GO:0051174,GO:0065007,GO:1903792,GO:1903795,GO:1903796,GO:1903959,GO:1903960,GO:2000185,GO:2000186 - 0.00000000000000000000000000000000006428 145.0
DYD2_k127_3641797_7 TIGRFAM phosphate binding protein K02040 - - 0.00000000000002539 85.0
DYD2_k127_3649703_0 cellulase activity K01178,K14645,K18546 - 3.2.1.3 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007068 346.0
DYD2_k127_3677060_0 Psort location Cytoplasmic, score 8.96 - - - 0.0000003572 56.0
DYD2_k127_3686069_0 Acyl-CoA dehydrogenase, C-terminal domain K00248,K00249 - 1.3.8.1,1.3.8.7 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004857 443.0
DYD2_k127_3686069_1 LAO AO transport system ATPase K07588 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000001458 300.0
DYD2_k127_3686069_2 B12 binding domain K01849 - 5.4.99.2 0.0000000000000000000000000000000000000000000000000000008365 195.0
DYD2_k127_3686069_3 eIF-2 functions in the early steps of protein synthesis by forming a ternary complex with GTP and initiator tRNA K03238 - - 0.00000000000000000000000000000000000000000000000001944 186.0
DYD2_k127_3686069_4 Phosphoesterase PA-phosphatase - - - 0.000000000000000000000000000007322 131.0
DYD2_k127_3686069_5 pfam mofrl K11529 - 2.7.1.165 0.000000000000000000001029 109.0
DYD2_k127_3686069_6 COG3668 Plasmid stabilization system protein - - - 0.00000000000009827 78.0
DYD2_k127_3686069_7 related to archaeal Holliday junction resolvase - - - 0.000000000001664 72.0
DYD2_k127_3686069_8 Prenyltransferase and squalene oxidase repeat K18115 - 4.2.1.137 0.000005216 60.0
DYD2_k127_3686069_9 DNA binding protein - - - 0.0002847 51.0
DYD2_k127_3693349_0 ThiF family K21029,K21147 - 2.7.7.80,2.8.1.11 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003423 446.0
DYD2_k127_3693349_1 Pyridoxal-phosphate dependent enzyme K12339,K21148 - 2.5.1.113,2.5.1.47 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009594 321.0
DYD2_k127_3693349_2 Protein of unknown function (DUF1015) - - - 0.000000000000000000000000001014 128.0
DYD2_k127_3693349_3 Domain of unknown function (DUF4395) - - - 0.0000000000007673 76.0
DYD2_k127_3693349_4 Mo-molybdopterin cofactor metabolic process K03148,K03636,K21029,K21147 GO:0000096,GO:0000097,GO:0003674,GO:0003824,GO:0005575,GO:0005618,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006082,GO:0006520,GO:0006534,GO:0006535,GO:0006563,GO:0006732,GO:0006777,GO:0006790,GO:0006793,GO:0006796,GO:0006807,GO:0008146,GO:0008150,GO:0008152,GO:0008652,GO:0009058,GO:0009069,GO:0009070,GO:0009108,GO:0009605,GO:0009607,GO:0009987,GO:0016053,GO:0016740,GO:0016772,GO:0016779,GO:0016782,GO:0018130,GO:0019344,GO:0019538,GO:0019637,GO:0019720,GO:0019752,GO:0020012,GO:0030312,GO:0030682,GO:0042783,GO:0043170,GO:0043207,GO:0043436,GO:0043545,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044272,GO:0044281,GO:0044283,GO:0044403,GO:0044413,GO:0044415,GO:0044419,GO:0044424,GO:0044444,GO:0044464,GO:0046394,GO:0046483,GO:0050896,GO:0051186,GO:0051188,GO:0051189,GO:0051701,GO:0051704,GO:0051707,GO:0051805,GO:0051807,GO:0051810,GO:0051832,GO:0051834,GO:0052173,GO:0052200,GO:0052564,GO:0052572,GO:0061605,GO:0070566,GO:0071704,GO:0071944,GO:0075136,GO:0090407,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576,GO:1901605,GO:1901607 2.7.7.73,2.7.7.80,2.8.1.11 0.0000000002403 67.0
DYD2_k127_3693349_5 metal-dependent protease of the PAD1 JAB1 superfamily - - - 0.000000002111 65.0
DYD2_k127_3693349_6 Involved in chlorophyll biosynthesis. Catalyzes the insertion of magnesium ion into protoporphyrin IX to yield Mg- protoporphyrin IX K03404 GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0009507,GO:0009532,GO:0009534,GO:0009536,GO:0009570,GO:0009579,GO:0010007,GO:0031976,GO:0031984,GO:0032991,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0044422,GO:0044424,GO:0044434,GO:0044435,GO:0044444,GO:0044446,GO:0044464,GO:1902494 6.6.1.1 0.00000009533 64.0
DYD2_k127_3693349_7 SMART Parallel beta-helix repeat - - - 0.000000622 63.0
DYD2_k127_3693349_8 SMART Parallel beta-helix repeat - - - 0.00000564 60.0
DYD2_k127_3735869_0 Specifically catalyzes the NAD or NADP-dependent dehydrogenation of L-aspartate to iminoaspartate K06989 - 1.4.1.21 0.00000000000000000000000000000000000000000000000006817 182.0
DYD2_k127_3735869_1 Aminotransferase class-V - - - 0.0000000000000315 72.0
DYD2_k127_3739228_0 DegT/DnrJ/EryC1/StrS aminotransferase family - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002394 449.0
DYD2_k127_3739228_1 Catalyzes the reversible interconversion of serine and glycine with a modified folate serving as the one-carbon carrier. Also exhibits a pteridine-independent aldolase activity toward beta-hydroxyamino acids, producing glycine and aldehydes, via a retro-aldol mechanism K00600 - 2.1.2.1 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002047 427.0
DYD2_k127_3739228_2 Catalyzes the sequential condensation of isopentenyl diphosphate (IPP) with geranylgeranyl diphosphate (GGPP) to yield (2Z,6Z,10Z,14Z,18Z,22Z,26Z,30E,34E,38E)-undecaprenyl diphosphate (tritrans,heptacis-UPP). It is probably the precursor of glycosyl carrier lipids K15888 GO:0002094,GO:0003674,GO:0003824,GO:0004659,GO:0006066,GO:0006629,GO:0006720,GO:0008150,GO:0008152,GO:0008299,GO:0008610,GO:0009058,GO:0009987,GO:0016093,GO:0016094,GO:0016740,GO:0016765,GO:0044237,GO:0044238,GO:0044249,GO:0044255,GO:0044281,GO:0044283,GO:0046165,GO:0071704,GO:1901576,GO:1901615,GO:1901617 2.5.1.89 0.00000000000000000000000000000000000000000000000000000000000000000000000000001121 274.0
DYD2_k127_3739228_3 TraB family - - - 0.000000000000000000000000000000000000000000000000000000000000000000005462 255.0
DYD2_k127_3739228_4 Belongs to the CDP-alcohol phosphatidyltransferase class-I family K00995,K17884 - 2.7.8.39,2.7.8.5 0.000000000000000000000000000000000000000000002144 176.0
DYD2_k127_3739228_5 COG1994 Zn-dependent proteases - - - 0.0000000000000000000000000000000001731 147.0
DYD2_k127_3739228_6 Methyltransferase domain K00588 - 2.1.1.104 0.00000000000000000000000000000003739 130.0
DYD2_k127_3739228_7 Broad-specificity nucleoside monophosphate (NMP) kinase that catalyzes the reversible transfer of the terminal phosphate group between nucleoside triphosphates and monophosphates K18532 - 2.7.4.3 0.000000000000000000000007672 114.0
DYD2_k127_3739228_8 Hexapeptide repeat of succinyl-transferase - - - 0.00004519 48.0
DYD2_k127_3757587_0 Amino acid permease - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000383 280.0
DYD2_k127_3757587_1 ABC-type multidrug transport system, ATPase component K01990 - - 0.000000000000000000000000000000000000000000000000000000000000000001352 237.0
DYD2_k127_3757587_2 COG1668 ABC-type Na efflux pump, permease component - - - 0.0000000000000000000000000000000000000000000000000000001101 216.0
DYD2_k127_3757587_3 COG1668 ABC-type Na efflux pump, permease component - - - 0.00000000000000000000000000000000000000001209 173.0
DYD2_k127_3757587_4 - - - - 0.00000000000004632 76.0
DYD2_k127_3757587_5 membrane - - - 0.000000000000979 77.0
DYD2_k127_3759554_0 Iron-sulfur cluster binding domain of dihydroorotate dehydrogenase B K02823 - - 0.00000000000000000000000000000000000000000001479 175.0
DYD2_k127_3759554_1 Lrp/AsnC ligand binding domain - - - 0.00000000000000000000000000000007049 125.0
DYD2_k127_3759554_2 nucleotide metabolic process - - - 0.00000000000000000000000003999 118.0
DYD2_k127_3759827_0 Short-chain dehydrogenase reductase SDR - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003554 312.0
DYD2_k127_3759827_1 1-(5-phosphoribosyl)-5- (5-phosphoribosylamino)methylideneamino imidazole-4-carboxamide isomerase K01814 GO:0000105,GO:0000162,GO:0003674,GO:0003824,GO:0003949,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006082,GO:0006520,GO:0006547,GO:0006568,GO:0006576,GO:0006586,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0008652,GO:0009058,GO:0009072,GO:0009073,GO:0009308,GO:0009309,GO:0009987,GO:0016053,GO:0016853,GO:0016860,GO:0016861,GO:0018130,GO:0019438,GO:0019752,GO:0034641,GO:0042401,GO:0042430,GO:0042435,GO:0043436,GO:0044106,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0044283,GO:0044424,GO:0044464,GO:0046219,GO:0046394,GO:0046483,GO:0052803,GO:0071704,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576,GO:1901605,GO:1901607 5.3.1.16 0.000000000000000000000000000000000000000003202 168.0
DYD2_k127_3759827_2 Histidine biosynthesis bifunctional protein HisIE K11755 GO:0000105,GO:0003674,GO:0003824,GO:0004635,GO:0004636,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006082,GO:0006520,GO:0006547,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0008652,GO:0009058,GO:0009987,GO:0016053,GO:0016462,GO:0016787,GO:0016810,GO:0016814,GO:0016817,GO:0016818,GO:0018130,GO:0019238,GO:0019438,GO:0019752,GO:0034641,GO:0043436,GO:0044237,GO:0044238,GO:0044249,GO:0044281,GO:0044283,GO:0044424,GO:0044444,GO:0044464,GO:0046394,GO:0046483,GO:0052803,GO:0071704,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576,GO:1901605,GO:1901607 3.5.4.19,3.6.1.31 0.000000000000000000000000000002984 135.0
DYD2_k127_3759827_3 imidazoleglycerol-phosphate dehydratase K01089,K01693 GO:0000105,GO:0003674,GO:0003824,GO:0004424,GO:0006082,GO:0006520,GO:0006547,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0008652,GO:0009058,GO:0009987,GO:0016053,GO:0016829,GO:0016835,GO:0016836,GO:0018130,GO:0019438,GO:0019752,GO:0034641,GO:0040007,GO:0043436,GO:0044237,GO:0044238,GO:0044249,GO:0044281,GO:0044283,GO:0046394,GO:0046483,GO:0052803,GO:0071704,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576,GO:1901605,GO:1901607 3.1.3.15,4.2.1.19 0.000000000000004342 87.0
DYD2_k127_3773348_0 PFAM type II secretion system protein E K07332 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004228 431.0
DYD2_k127_3773348_1 RibD C-terminal domain K14654 GO:0000166,GO:0003674,GO:0003824,GO:0005488,GO:0005515,GO:0006139,GO:0006725,GO:0006766,GO:0006767,GO:0006771,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009110,GO:0009231,GO:0009451,GO:0009987,GO:0016070,GO:0016491,GO:0016614,GO:0016616,GO:0017144,GO:0018130,GO:0034641,GO:0036094,GO:0042364,GO:0042726,GO:0042727,GO:0043170,GO:0043412,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0044283,GO:0046483,GO:0046983,GO:0048037,GO:0050661,GO:0050662,GO:0051287,GO:0055114,GO:0071704,GO:0090304,GO:0097159,GO:1901265,GO:1901360,GO:1901362,GO:1901363,GO:1901564,GO:1901566,GO:1901576 1.1.1.302 0.000000000000000000000000000000000000007175 154.0
DYD2_k127_3773348_2 Type II secretion system (T2SS), protein F K07333 - - 0.000000000000000000000000000001735 138.0
DYD2_k127_3773348_3 Type II secretion system (T2SS), protein F K07333 - - 0.00000000000000000000000000001889 134.0
DYD2_k127_3773348_4 Pfam:Arch_ATPase - - - 0.000000000000000000000169 110.0
DYD2_k127_3773348_5 TraB family - - - 0.00000000000000000001558 106.0
DYD2_k127_3773348_6 Peptidase family M28 - - - 0.0000000005661 71.0
DYD2_k127_3773348_7 TIGRFAM phosphate binding protein K02040 - - 0.00000002191 66.0
DYD2_k127_3773348_8 Circadian clock protein KaiC - - - 0.0001945 52.0
DYD2_k127_3780003_0 Catalyzes the ATP-dependent transfer of a sulfur to tRNA to produce 4-thiouridine in position 8 of tRNAs, which functions as a near-UV photosensor. Also catalyzes the transfer of sulfur to the sulfur carrier protein ThiS, forming ThiS-thiocarboxylate. This is a step in the synthesis of thiazole, in the thiamine biosynthesis pathway. The sulfur is donated as persulfide by IscS K03151 - 2.8.1.4 0.0000000000000000000000000000000000000001098 165.0
DYD2_k127_3780003_1 Catalyzes the NADPH-dependent reduction of ketopantoate into pantoic acid K00077 - 1.1.1.169 0.00000000000000000000000000000000001106 148.0
DYD2_k127_3780003_2 Belongs to the PEP-utilizing enzyme family K01006 - 2.7.9.1 0.0000000000000000000000000000000001313 133.0
DYD2_k127_3780003_3 Catalyzes the ATP-dependent transfer of a sulfur to tRNA to produce 4-thiouridine in position 8 of tRNAs, which functions as a near-UV photosensor. Also catalyzes the transfer of sulfur to the sulfur carrier protein ThiS, forming ThiS-thiocarboxylate. This is a step in the synthesis of thiazole, in the thiamine biosynthesis pathway. The sulfur is donated as persulfide by IscS K03151 - 2.8.1.4 0.000000000000000000000000000000003433 144.0
DYD2_k127_3780003_4 LVIVD repeat - - - 0.000000002546 70.0
DYD2_k127_3807037_0 Deoxyhypusine synthase K00809 - 2.5.1.46 0.000000000000000000000000000000000000000000000000000004133 208.0
DYD2_k127_3807037_1 TOBE domain K02062,K11072 - 3.6.3.31 0.000000000000000000000000000000000000000000000000000004609 198.0
DYD2_k127_3807037_2 PFAM Binding-protein-dependent transport system inner membrane component K02063 - - 0.0000000000000000000000000000000000000000000000000001888 205.0
DYD2_k127_3807037_3 membrane transporter protein K07090 - - 0.0000000000000000000000000000000000893 139.0
DYD2_k127_3807037_4 RNase_H superfamily - - - 0.0008891 50.0
DYD2_k127_3812551_0 GTPase of unknown function C-terminal K06942 GO:0003674,GO:0003824,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0016462,GO:0016787,GO:0016817,GO:0016818,GO:0016887,GO:0017111,GO:0044424,GO:0044464 - 0.00000000000000000000000000000000000000000001454 166.0
DYD2_k127_3820275_0 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase K00261,K00262 - 1.4.1.3,1.4.1.4 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004509 556.0
DYD2_k127_3820275_1 Ferritin-like domain K04047 - - 0.0000000000000000000000002057 112.0
DYD2_k127_3831764_0 phosphoglucomutase phosphomannomutase alpha beta alpha domain I K15778 - 5.4.2.2,5.4.2.8 0.00000000000000000000000000000000000000000000000000000000000000000000000001708 262.0
DYD2_k127_3831764_1 Stabilizes TBP binding to an archaeal box-A promoter. Also responsible for recruiting RNA polymerase II to the pre- initiation complex (DNA-TBP-TFIIB) K03124 - - 0.00000000000000000000000000000000000000000000000000000005863 197.0
DYD2_k127_3840953_0 pfam abc1 K03688 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000006745 315.0
DYD2_k127_3840953_1 eIF-2 functions in the early steps of protein synthesis by forming a ternary complex with GTP and initiator tRNA K03237 GO:0003674,GO:0003676,GO:0003723,GO:0003743,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005840,GO:0006412,GO:0006413,GO:0006518,GO:0006807,GO:0008135,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0019538,GO:0032991,GO:0034641,GO:0034645,GO:0043021,GO:0043022,GO:0043043,GO:0043170,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044424,GO:0044444,GO:0044464,GO:0044877,GO:0071704,GO:0097159,GO:1901363,GO:1901564,GO:1901566,GO:1901576,GO:1990904 - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000002571 279.0
DYD2_k127_3840953_2 Aspartyl-tRNA synthetase with relaxed tRNA specificity since it is able to aspartylate not only its cognate tRNA(Asp) but also tRNA(Asn). Reaction proceeds in two steps L-aspartate is first activated by ATP to form Asp-AMP and then transferred to the acceptor end of tRNA(Asp Asn) K09759 - 6.1.1.23 0.00000000000000000000000000000000000000000000000000000000000004188 222.0
DYD2_k127_3840953_3 more specifically in 18S rRNA pseudouridylation and in cleavage of pre-rRNA K11130 - - 0.000000000004456 70.0
DYD2_k127_3842731_0 One of the primary rRNA binding proteins, it binds directly to 16S rRNA where it nucleates assembly of the body of the 30S subunit K02986 GO:0003674,GO:0003676,GO:0003723,GO:0003735,GO:0005198,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005840,GO:0006417,GO:0006450,GO:0008150,GO:0009889,GO:0009891,GO:0009893,GO:0010468,GO:0010556,GO:0010557,GO:0010604,GO:0010608,GO:0010628,GO:0015935,GO:0019222,GO:0019843,GO:0031323,GO:0031325,GO:0031326,GO:0031328,GO:0032268,GO:0032270,GO:0032991,GO:0034248,GO:0034250,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044446,GO:0044464,GO:0045727,GO:0045903,GO:0048518,GO:0048522,GO:0050789,GO:0050794,GO:0051171,GO:0051173,GO:0051246,GO:0051247,GO:0060255,GO:0065007,GO:0065008,GO:0080090,GO:0097159,GO:1901363,GO:1990904,GO:2000112 - 0.0000000000000000000000000000000000000000000000000001599 191.0
DYD2_k127_3842731_1 DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates K03047 - 2.7.7.6 0.000000000000000000000000000000000000000000000001478 189.0
DYD2_k127_3842731_2 Located on the platform of the 30S subunit K02948 GO:0000028,GO:0000462,GO:0003674,GO:0003676,GO:0003723,GO:0003729,GO:0003735,GO:0005198,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0006139,GO:0006364,GO:0006396,GO:0006412,GO:0006518,GO:0006725,GO:0006807,GO:0006996,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0015935,GO:0016043,GO:0016070,GO:0016072,GO:0019538,GO:0019843,GO:0022607,GO:0022613,GO:0022618,GO:0022626,GO:0022627,GO:0030490,GO:0032991,GO:0034470,GO:0034622,GO:0034641,GO:0034645,GO:0034660,GO:0042254,GO:0042255,GO:0042274,GO:0043043,GO:0043170,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043603,GO:0043604,GO:0043933,GO:0044085,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:0046483,GO:0048027,GO:0065003,GO:0070181,GO:0070925,GO:0071704,GO:0071826,GO:0071840,GO:0090304,GO:0097159,GO:1901360,GO:1901363,GO:1901564,GO:1901566,GO:1901576,GO:1990904 - 0.000000000000000000000000000000000000000000000004754 175.0
DYD2_k127_3842731_3 Located at the top of the head of the 30S subunit, it contacts several helices of the 16S rRNA. In the 70S ribosome it contacts the 23S rRNA (bridge B1a) and protein L5 of the 50S subunit (bridge B1b), connecting the 2 subunits K02952 - - 0.000000000000000000000000000000000000002268 155.0
DYD2_k127_387234_0 nitronate monooxygenase activity K00459 - 1.13.12.16 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007845 617.0
DYD2_k127_387234_1 Copper binding proteins, plastocyanin/azurin family K00368 - 1.7.2.1 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003422 355.0
DYD2_k127_387234_2 dioxygenase K00457,K16421 - 1.13.11.27,1.13.11.46 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003096 334.0
DYD2_k127_387234_3 Fatty acid desaturase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000115 280.0
DYD2_k127_387234_4 Phenylacetate-CoA oxygenase K15512 - 1.14.13.208 0.0000000000000000000000000000000000000000000000000000004573 209.0
DYD2_k127_387234_5 - - - - 0.000000000000000000000000205 116.0
DYD2_k127_387234_6 COG0589 Universal stress protein UspA and related nucleotide-binding proteins - - - 0.0000000000000617 78.0
DYD2_k127_387234_7 - - - - 0.000000171 63.0
DYD2_k127_387234_8 HTH DNA binding domain - - - 0.00001237 55.0
DYD2_k127_392275_0 ATP-dependent helicase activity K10844 - 3.6.4.12 0.000000000000000000000000000000000000000000000000000000000000129 237.0
DYD2_k127_392275_1 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain K00074 - 1.1.1.157 0.00000000000000000000000000000000000000000000000000000005605 211.0
DYD2_k127_392275_2 Domain of unknown function (DUF2935) - - - 0.000000000000000000000000000000000000000000000000005612 194.0
DYD2_k127_392275_3 Ribosomal protein S8e K02995 GO:0000462,GO:0003674,GO:0003735,GO:0005198,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0006139,GO:0006364,GO:0006396,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0009987,GO:0010467,GO:0015935,GO:0016070,GO:0016072,GO:0022613,GO:0022626,GO:0022627,GO:0030490,GO:0032991,GO:0034470,GO:0034641,GO:0034660,GO:0042254,GO:0042274,GO:0043170,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0044085,GO:0044237,GO:0044238,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:0046483,GO:0071704,GO:0071840,GO:0090304,GO:1901360,GO:1990904 - 0.000000000000000000000000006193 117.0
DYD2_k127_392275_4 Ribosomal protein S8e K02995 GO:0000462,GO:0003674,GO:0003735,GO:0005198,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0006139,GO:0006364,GO:0006396,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0009987,GO:0010467,GO:0015935,GO:0016070,GO:0016072,GO:0022613,GO:0022626,GO:0022627,GO:0030490,GO:0032991,GO:0034470,GO:0034641,GO:0034660,GO:0042254,GO:0042274,GO:0043170,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0044085,GO:0044237,GO:0044238,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:0046483,GO:0071704,GO:0071840,GO:0090304,GO:1901360,GO:1990904 - 0.0000000000000005996 84.0
DYD2_k127_392275_5 4 iron, 4 sulfur cluster binding - - - 0.0000000000003202 76.0
DYD2_k127_392275_6 Belongs to the eukaryotic ribosomal protein eL18 family K02883 - - 0.0000000001795 66.0
DYD2_k127_392275_7 Involved in targeting and insertion of nascent membrane proteins into the cytoplasmic membrane. Binds directly to 7S RNA and mediates binding of the 54 kDa subunit of the SRP K03105 - - 0.0000000003321 64.0
DYD2_k127_392275_8 Transcriptional regulator - - - 0.0000107 55.0
DYD2_k127_393168_0 TIGRFAM 2-oxoacid acceptor oxidoreductase, alpha subunit K00174 - 1.2.7.11,1.2.7.3 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001728 317.0
DYD2_k127_393168_1 COG1013 Pyruvate ferredoxin oxidoreductase and related 2-oxoacid ferredoxin oxidoreductases, beta subunit K00175 - 1.2.7.11,1.2.7.3 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000127 305.0
DYD2_k127_3955366_0 NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient K00331 - 1.6.5.3 0.0000000000000000000000000000000000000000000000000000000000953 218.0
DYD2_k127_3955366_1 Putative S-adenosyl-L-methionine-dependent methyltransferase - - - 0.000000000000000000000000000000000000000000000000009581 195.0
DYD2_k127_3955366_2 NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient K00330 - 1.6.5.3 0.0000000000000000005079 93.0
DYD2_k127_3955366_3 electron donor, via FMN and iron-sulfur (Fe-S) centers, to quinones in the respiratory and or the photosynthetic chain. The immediate electron acceptor for the enzyme in this species is believed to be plastoquinone. Couples the redox reaction to proton translocation, and thus conserves the redox energy in a proton gradient. Cyanobacterial NDH-1 also plays a role in inorganic carbon- concentration K05581 GO:0003674,GO:0003824,GO:0003954,GO:0006091,GO:0008137,GO:0008150,GO:0008152,GO:0009987,GO:0015980,GO:0016491,GO:0016651,GO:0016655,GO:0044237,GO:0045333,GO:0050136,GO:0055114 1.6.5.3 0.00000000171 64.0
DYD2_k127_3984025_0 Belongs to the RNA polymerase beta chain family K03045 - 2.7.7.6 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002885 413.0
DYD2_k127_3984025_1 DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates K03053 - 2.7.7.6 0.000000000000000001046 91.0
DYD2_k127_3992053_0 COG0417 DNA polymerase elongation subunit (family B) K02319 - 2.7.7.7 0.0000000000000000000000000000000000000000000000000000000000000000000000000000003897 302.0
DYD2_k127_3992053_1 Permeases of the drug metabolite transporter (DMT) superfamily - - - 0.00000000000000000000000000000000001156 147.0
DYD2_k127_3992053_2 ATP-dependent DNA helicase (RecQ) K03654 - 3.6.4.12 0.00000000001349 73.0
DYD2_k127_3993331_0 Sulfate permease family K01673,K03321 - 4.2.1.1 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008126 450.0
DYD2_k127_3993331_1 With S4 and S5 plays an important role in translational accuracy. Located at the interface of the 30S and 50S subunits K02950 GO:0003674,GO:0003735,GO:0005198,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0006412,GO:0006518,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0015935,GO:0019538,GO:0022626,GO:0022627,GO:0032991,GO:0034641,GO:0034645,GO:0043043,GO:0043170,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:0071704,GO:1901564,GO:1901566,GO:1901576,GO:1990904 - 0.0000000000000000000000000000000000000000000000000000000000000001254 225.0
DYD2_k127_3993331_2 One of the primary rRNA binding proteins, it binds directly to 16S rRNA where it nucleates assembly of the head domain of the 30S subunit. Is located at the subunit interface close to the decoding center K02992 GO:0000028,GO:0003674,GO:0003676,GO:0003723,GO:0003729,GO:0003735,GO:0005198,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0006412,GO:0006518,GO:0006807,GO:0006996,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0015935,GO:0016043,GO:0019538,GO:0019843,GO:0022607,GO:0022613,GO:0022618,GO:0022626,GO:0022627,GO:0032991,GO:0034622,GO:0034641,GO:0034645,GO:0042254,GO:0042255,GO:0042274,GO:0043043,GO:0043170,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043603,GO:0043604,GO:0043933,GO:0044085,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:0065003,GO:0070925,GO:0071704,GO:0071826,GO:0071840,GO:0097159,GO:1901363,GO:1901564,GO:1901566,GO:1901576,GO:1990904 - 0.00000000000000000000000000000000000000000000000000000000000001056 223.0
DYD2_k127_3993331_3 binds to the 23S rRNA K02922 - - 0.00000000000000006007 81.0
DYD2_k127_3993331_4 - - - - 0.0000005668 61.0
DYD2_k127_3998366_0 peptidase M20 - - - 0.000000000000000000000000000000000000000000000000000001308 197.0
DYD2_k127_3998366_1 Domain of unknown function DUF83 K07464 - 3.1.12.1 0.00000000000000000000000001538 121.0
DYD2_k127_3998366_2 - - - - 0.000111 51.0
DYD2_k127_4074577_0 Pyridoxamine 5'-phosphate oxidase K07005 - - 0.00000000000000000000000000000000000000000000000000001235 193.0
DYD2_k127_4074577_1 Protein of unknown function (DUF531) K09725 - - 0.0000000000000000000000000000000001006 143.0
DYD2_k127_4074577_2 Phosphoglucomutase phosphomannomutase, alpha beta alpha domain II K01835 - 5.4.2.2 0.00000000002967 66.0
DYD2_k127_4074577_3 - - - - 0.00001001 55.0
DYD2_k127_4074577_4 X-Pro dipeptidyl-peptidase (S15 family) - - - 0.00001104 57.0
DYD2_k127_4177339_0 The central subunit of the protein translocation channel SecYEG. Consists of two halves formed by TMs 1-5 and 6-10. These two domains form a lateral gate at the front which open onto the bilayer between TMs 2 and 7, and are clamped together by SecE at the back. The channel is closed by both a pore ring composed of hydrophobic SecY resides and a short helix (helix 2A) on the extracellular side of the membrane which forms a plug. The plug probably moves laterally to allow the channel to open. The ring and the pore may move independently K03076 GO:0005575,GO:0005623,GO:0005886,GO:0016020,GO:0044464,GO:0071944 - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009101 566.0
DYD2_k127_4177339_1 With S4 and S12 plays an important role in translational accuracy K02988 - - 0.000000000000000000000000000000000000000000000000000000000000000000004013 240.0
DYD2_k127_4177339_2 ribosomal protein K02907 - - 0.00000000000000000000000000000000000000003611 158.0
DYD2_k127_4177339_3 Binds to the 23S rRNA K02876 - - 0.000000000003124 74.0
DYD2_k127_4213181_0 ATPase family associated with various cellular activities (AAA) K03924 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008973 347.0
DYD2_k127_4234804_0 DNA topoisomerase K03168 - 5.99.1.2 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001222 543.0
DYD2_k127_4234804_1 PFAM elongation factor Tu domain 2 - - - 0.00000000000000000000000000000000000000000000000000000002358 213.0
DYD2_k127_4234804_2 COG1522 Transcriptional regulators - - - 0.0000000000000000000000000000005136 130.0
DYD2_k127_4234804_3 Winged helix-turn-helix DNA-binding - - - 0.00000000001784 75.0
DYD2_k127_4234804_4 - - - - 0.00007835 55.0
DYD2_k127_4234804_5 Belongs to the small heat shock protein (HSP20) family K13993 GO:0000302,GO:0006950,GO:0006979,GO:0008150,GO:0009266,GO:0009314,GO:0009408,GO:0009416,GO:0009628,GO:0009636,GO:0009642,GO:0009644,GO:0010035,GO:0042221,GO:0042493,GO:0042542,GO:0046677,GO:0050896,GO:1901700 - 0.0001334 52.0
DYD2_k127_4252166_0 Catalyzes the ATP-dependent amination of UTP to CTP with either L-glutamine or ammonia as the source of nitrogen. Regulates intracellular CTP levels through interactions with the four ribonucleotide triphosphates K01937 - 6.3.4.2 1.983e-197 655.0
DYD2_k127_4252166_1 PFAM Sodium hydrogen exchanger family - - - 0.000000000000000000000000000000000000000000000000000000000000000000147 247.0
DYD2_k127_4252166_2 cytidyltransferase-related domain K00952 - 2.7.7.1 0.0000000000000000000000001654 112.0
DYD2_k127_4276759_0 Glycosyl transferase 4-like domain - - - 0.000000000000000000000000000000000000000000000000000001104 207.0
DYD2_k127_4276759_1 UbiA prenyltransferase family K02548 - 2.5.1.74 0.00000000000000000000000000000000000006323 158.0
DYD2_k127_4276759_2 PFAM Glycosyl transferase, group 1 K12583 GO:0000030,GO:0003674,GO:0003824,GO:0006629,GO:0006643,GO:0006664,GO:0008150,GO:0008152,GO:0008610,GO:0009058,GO:0009247,GO:0009987,GO:0016740,GO:0016757,GO:0016758,GO:0040007,GO:0044237,GO:0044238,GO:0044249,GO:0044255,GO:0046467,GO:0070085,GO:0071704,GO:0097502,GO:1901135,GO:1901137,GO:1901576,GO:1903509 - 0.000000000000000000000000000000000003419 150.0
DYD2_k127_4276759_3 Histidine kinase - - - 0.000000001148 70.0
DYD2_k127_4276759_4 HTH DNA binding domain - - - 0.0002068 51.0
DYD2_k127_4289903_0 Belongs to the argininosuccinate synthase family. Type 1 subfamily K01940 GO:0000050,GO:0000053,GO:0003674,GO:0003824,GO:0004055,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006082,GO:0006520,GO:0006525,GO:0006526,GO:0006575,GO:0006807,GO:0008150,GO:0008152,GO:0008652,GO:0009058,GO:0009064,GO:0009084,GO:0009987,GO:0016053,GO:0016874,GO:0016879,GO:0019627,GO:0019752,GO:0034641,GO:0043436,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0044283,GO:0044424,GO:0044464,GO:0046394,GO:0071704,GO:0071941,GO:0072350,GO:1901564,GO:1901566,GO:1901576,GO:1901605,GO:1901607 6.3.4.5 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003195 404.0
DYD2_k127_4289903_1 Belongs to the class-II aminoacyl-tRNA synthetase family. Phe-tRNA synthetase alpha subunit type 2 subfamily K01889 GO:0003674,GO:0003824,GO:0004812,GO:0004826,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006082,GO:0006139,GO:0006399,GO:0006412,GO:0006418,GO:0006432,GO:0006518,GO:0006520,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0016070,GO:0016874,GO:0016875,GO:0019538,GO:0019752,GO:0034641,GO:0034645,GO:0034660,GO:0043038,GO:0043039,GO:0043043,GO:0043170,GO:0043436,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044281,GO:0044424,GO:0044464,GO:0046483,GO:0071704,GO:0090304,GO:0140098,GO:0140101,GO:1901360,GO:1901564,GO:1901566,GO:1901576 6.1.1.20 0.00000000000000000000000000000000000000000000002115 171.0
DYD2_k127_4289903_2 ACT domain - - - 0.00000000000000000000002409 108.0
DYD2_k127_4337623_0 FeS assembly protein SufB K07033,K09014 GO:0003674,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006790,GO:0008150,GO:0008152,GO:0009536,GO:0009842,GO:0009987,GO:0016043,GO:0016226,GO:0022607,GO:0031163,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0044085,GO:0044237,GO:0044424,GO:0044444,GO:0044464,GO:0048037,GO:0051186,GO:0051536,GO:0051537,GO:0051539,GO:0051540,GO:0071840 - 3.703e-195 615.0
DYD2_k127_4337623_1 TspO/MBR family K05770 - - 0.0000000000000000000000000000000000000000000000004268 181.0
DYD2_k127_4339491_0 - - - - 0.0002921 53.0
DYD2_k127_4367180_0 protein some members contain a von Willebrand factor type A vWA domain - - - 0.000000000000000000002305 108.0
DYD2_k127_4371595_0 Amidohydrolase family K01468 - 3.5.2.7 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002321 338.0
DYD2_k127_4371595_1 KR domain - - - 0.00000000000000000000000000000000000000000001114 174.0
DYD2_k127_4371595_2 Catalyzes the conversion of N-formimidoyl-L-glutamate to L-glutamate and formamide K01479 - 3.5.3.8 0.000000000000000000000000000000000000000000162 181.0
DYD2_k127_4371595_3 Major facilitator Superfamily - - - 0.000000001077 66.0
DYD2_k127_4371834_0 Luciferase-like monooxygenase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005413 315.0
DYD2_k127_4371834_1 General factor that plays a role in the activation of archaeal genes transcribed by RNA polymerase. Binds specifically to the TATA box promoter element which lies close to the position of transcription initiation K03120 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000002825 251.0
DYD2_k127_4371834_2 Catalyzes the addition and repair of the essential 3'- terminal CCA sequence in tRNAs without using a nucleic acid template. Adds these three nucleotides in the order of C, C, and A to the tRNA nucleotide-73, using CTP and ATP as substrates and producing inorganic pyrophosphate K07558 - 2.7.7.72 0.000000000000000000000000000000000000000000000000000000000003176 227.0
DYD2_k127_4371834_3 PAP2 superfamily - - - 0.0000000000000000000009871 106.0
DYD2_k127_4371834_4 - - - - 0.00001306 56.0
DYD2_k127_4371834_5 Protein of unknown function (DUF2797) - - - 0.00005796 52.0
DYD2_k127_439037_0 COG1077 Actin-like ATPase involved in cell morphogenesis - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000721 336.0
DYD2_k127_439037_1 FMN-dependent dehydrogenase K01823 GO:0003674,GO:0003824,GO:0004452,GO:0006629,GO:0006720,GO:0008150,GO:0008152,GO:0008299,GO:0008610,GO:0009058,GO:0009987,GO:0016853,GO:0016860,GO:0016863,GO:0044237,GO:0044238,GO:0044249,GO:0044255,GO:0071704,GO:1901576 5.3.3.2 0.000000000000000000000000000000000000000000000000000000000000000000000000000000008887 282.0
DYD2_k127_439037_2 Belongs to the FPP GGPP synthase family K13787 - 2.5.1.1,2.5.1.10,2.5.1.29 0.0000000000000000000000000000000000000000000000000000000000000001153 235.0
DYD2_k127_439037_3 Domain of unknown function (DUF1508) - - - 0.000000000000001326 88.0
DYD2_k127_4399676_0 Part of the RFC clamp loader complex which loads the PCNA sliding clamp onto DNA K04800 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000105 333.0
DYD2_k127_4399676_1 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000007482 306.0
DYD2_k127_4399676_2 Bacterial alpha-L-rhamnosidase 6 hairpin glycosidase domain - - - 0.0000000000000000000000000000000001453 151.0
DYD2_k127_4399676_3 TIGRFAM FeS assembly SUF system protein SufT - - - 0.00000000000000000000000000001359 121.0
DYD2_k127_4399676_4 nUDIX hydrolase K01515,K08310 - 3.6.1.13,3.6.1.67 0.000000000000000000000000006062 120.0
DYD2_k127_4399676_5 PFAM DNA polymerase, beta domain protein region K07075 - - 0.0000001825 58.0
DYD2_k127_4399676_6 Protein of unknown function DUF86 - - - 0.000009761 55.0
DYD2_k127_4400125_0 Maf-like protein K06287 - - 0.000000000000000000000000000002899 129.0
DYD2_k127_4400125_1 Allows the formation of correctly charged Gln-tRNA(Gln) through the transamidation of misacylated Glu-tRNA(Gln) in organisms which lack glutaminyl-tRNA synthetase. The reaction takes place in the presence of glutamine and ATP through an activated gamma-phospho-Glu-tRNA(Gln). The GatDE system is specific for glutamate and does not act on aspartate K03330 - 6.3.5.7 0.0000000000000003263 85.0
DYD2_k127_4400125_2 ParE toxin of type II toxin-antitoxin system, parDE K06218 - - 0.000002597 53.0
DYD2_k127_4400125_3 Winged helix-turn-helix DNA-binding - - - 0.00002982 53.0
DYD2_k127_4408027_0 binds to the 23S rRNA K02921 - - 0.0000000000000000000005569 99.0
DYD2_k127_4408027_1 DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates K03059 - 2.7.7.6 0.0000002235 59.0
DYD2_k127_4408027_2 Glucose sorbosone - - - 0.0002491 51.0
DYD2_k127_4446840_0 Zinc-binding dehydrogenase - - - 0.000000000000000000000000000000000000000000000000000004772 198.0
DYD2_k127_4446840_1 PFAM Phosphoribosyl transferase domain K07100 - - 0.00000000000000000000000000000000000000000000000000000766 197.0
DYD2_k127_4446840_10 Dodecin K09165 - - 0.000000009771 65.0
DYD2_k127_4446840_11 - - - - 0.000002535 57.0
DYD2_k127_4446840_12 cobalamin transport - - - 0.00002469 55.0
DYD2_k127_4446840_13 IrrE N-terminal-like domain - - - 0.00004703 54.0
DYD2_k127_4446840_2 Belongs to the MsrB Met sulfoxide reductase family K07305 - 1.8.4.12 0.000000000000000000000000000000000000000000000000005605 186.0
DYD2_k127_4446840_3 Possible lysine decarboxylase K06966 - 3.2.2.10 0.00000000000000000000000000000000000000000000001628 185.0
DYD2_k127_4446840_4 Acyl-CoA dehydrogenase K00248 - 1.3.8.1 0.000000000000000000000000000000000000000004145 171.0
DYD2_k127_4446840_5 - - - - 0.00000000000000000000000000000000000002716 154.0
DYD2_k127_4446840_6 Belongs to the eukaryotic ribosomal protein eS6 family K02991 - - 0.00000000000000000000000000000000001869 139.0
DYD2_k127_4446840_7 sequence-specific DNA binding - - - 0.00000000000000000000000000000000473 140.0
DYD2_k127_4446840_8 - - - - 0.0000000000000000000000005643 112.0
DYD2_k127_4446840_9 FeoA K03709 - - 0.000000000000000000000009752 108.0
DYD2_k127_4467279_0 metal-dependent hydrolase (Urease superfamily) K07049 - - 0.00000000000000000000000000000000000000000000000003591 191.0
DYD2_k127_4472240_0 Acts as a magnesium transporter K06213 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002669 513.0
DYD2_k127_4472240_1 Mediates influx of magnesium ions K03284 - - 0.000000000000000000000000000000000000000001128 168.0
DYD2_k127_4506067_0 Transcriptional regulator, ArsR family - - - 0.00000000000000006262 91.0
DYD2_k127_4506067_1 Copper binding proteins, plastocyanin/azurin family - - - 0.00000009158 59.0
DYD2_k127_4506067_2 Zinc metalloprotease (Elastase) - - - 0.000001141 55.0
DYD2_k127_4507051_0 Catalyzes the formation of CDP-2,3-bis-(O- geranylgeranyl)-sn-glycerol (CDP-archaeol) from 2,3-bis-(O- geranylgeranyl)-sn-glycerol 1-phosphate (DGGGP) and CTP. This reaction is the third ether-bond-formation step in the biosynthesis of archaeal membrane lipids K19664 - 2.7.7.67 0.000000000000000000000000004228 119.0
DYD2_k127_4507548_0 ATPases associated with a variety of cellular activities K02003 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000001147 293.0
DYD2_k127_4507548_1 PFAM Glycosyl transferase family 2 K19003 - 2.4.1.336 0.0000000000000000000000000000000000000000000000000000000000000000000003841 265.0
DYD2_k127_4507548_2 MacB-like periplasmic core domain K02004 - - 0.000000000000000000000000000000000000000000000000000000000004187 238.0
DYD2_k127_4507548_3 ZIP Zinc transporter K07238,K16267 - - 0.0000000000000000000000000000000000000000008463 168.0
DYD2_k127_4507548_4 Copper resistance protein CopC K14166 - - 0.0000000000000000001945 103.0
DYD2_k127_4507548_5 transcriptional regulator K07722 - - 0.0000000001734 68.0
DYD2_k127_4507548_6 Essential subunit of the Sec protein translocation channel SecYEG. Clamps together the 2 halves of SecY. May contact the channel plug during translocation K07342 - - 0.000000000262 65.0
DYD2_k127_4507548_7 PFAM Archease protein family (DUF101 UPF0211) - - - 0.000000001108 66.0
DYD2_k127_4507548_8 helix_turn_helix, Arsenical Resistance Operon Repressor K22298 - - 0.00000002172 59.0
DYD2_k127_4523733_0 Catalyzes the isomerization between 2-isopropylmalate and 3-isopropylmalate, via the formation of 2-isopropylmaleate K01703 - 4.2.1.33,4.2.1.35 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001765 392.0
DYD2_k127_4523733_1 amino acid K03294 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000199 286.0
DYD2_k127_4523733_10 - - - - 0.00001486 51.0
DYD2_k127_4523733_2 amino acid K03294 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000002809 272.0
DYD2_k127_4523733_3 Belongs to the metallo-dependent hydrolases superfamily. DHOase family. Class I DHOase subfamily K01465 GO:0003674,GO:0003824,GO:0004038,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006139,GO:0006144,GO:0006145,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0009056,GO:0009112,GO:0009987,GO:0016787,GO:0016810,GO:0016812,GO:0019439,GO:0034641,GO:0044237,GO:0044238,GO:0044248,GO:0044270,GO:0044281,GO:0044424,GO:0044464,GO:0046113,GO:0046483,GO:0046700,GO:0055086,GO:0071704,GO:0072521,GO:0072523,GO:1901360,GO:1901361,GO:1901564,GO:1901565,GO:1901575 3.5.2.3 0.000000000000000000000000000000000000000000000000000000000000000000001867 270.0
DYD2_k127_4523733_4 Specifically methylates the uridine in position 2552 of 23S rRNA at the 2'-O position of the ribose in the fully assembled 50S ribosomal subunit K02427 GO:0001510,GO:0003674,GO:0003824,GO:0006139,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0008168,GO:0008173,GO:0009451,GO:0009987,GO:0016070,GO:0016740,GO:0016741,GO:0032259,GO:0034641,GO:0043170,GO:0043412,GO:0043414,GO:0044237,GO:0044238,GO:0044260,GO:0046483,GO:0071704,GO:0090304,GO:0140098,GO:1901360 2.1.1.166 0.000000000000000000000000000000000000000000000000000355 192.0
DYD2_k127_4523733_5 Dimethylates a single guanine residue at position 26 of a number of tRNAs using S-adenosyl-L-methionine as donor of the methyl groups K00555 - 2.1.1.215,2.1.1.216 0.000000000000000000000000000000000000000000002408 182.0
DYD2_k127_4523733_6 phosphoserine phosphatase K01079 - 3.1.3.3 0.000000000000000000000000000000000000000259 159.0
DYD2_k127_4523733_8 PA domain - - - 0.000000000004242 79.0
DYD2_k127_4523733_9 Catalyzes the isomerization between 2-isopropylmalate and 3-isopropylmalate, via the formation of 2-isopropylmaleate K01703 - 4.2.1.33,4.2.1.35 0.00000001747 56.0
DYD2_k127_4535094_0 Catalyzes the reversible conversion of 2- phosphoglycerate into phosphoenolpyruvate. It is essential for the degradation of carbohydrates via glycolysis K01689 - 4.2.1.11 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001126 533.0
DYD2_k127_4535094_1 Acyl-CoA dehydrogenase K00248,K00249 - 1.3.8.1,1.3.8.7 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005241 359.0
DYD2_k127_4535094_2 Catalyzes the attachment of L-aspartate to tRNA(Asp) in a two-step reaction L-aspartate is first activated by ATP to form Asp-AMP and then transferred to the acceptor end of tRNA(Asp) K22503 - 6.1.1.12 0.000000000000000000000000000000000000000000000000000000000000000000000006371 250.0
DYD2_k127_4535094_3 Involved in the biosynthesis of the central metabolite phospho-alpha-D-ribosyl-1-pyrophosphate (PRPP) via the transfer of pyrophosphoryl group from ATP to 1-hydroxyl of ribose-5-phosphate (Rib-5-P) K00948 - 2.7.6.1 0.00000000000000000000000000000000000000000000000000000000000000001677 235.0
DYD2_k127_4535094_4 Major facilitator Superfamily K08223 - - 0.000000000000000000000000000000000000000000000000002432 199.0
DYD2_k127_4535094_5 this gene contains a nucleotide ambiguity which may be the result of a sequencing error - - - 0.0000000000000000000134 108.0
DYD2_k127_4535094_6 - - - - 0.0009541 50.0
DYD2_k127_4541414_0 eIF-2 functions in the early steps of protein synthesis by forming a ternary complex with GTP and initiator tRNA K03242 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001642 514.0
DYD2_k127_4541414_1 Catalyzes the synthesis of GMP from XMP K01951 GO:0003674,GO:0003824,GO:0003921,GO:0003922,GO:0006139,GO:0006163,GO:0006164,GO:0006177,GO:0006725,GO:0006753,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009116,GO:0009117,GO:0009119,GO:0009123,GO:0009124,GO:0009126,GO:0009127,GO:0009150,GO:0009152,GO:0009156,GO:0009161,GO:0009163,GO:0009165,GO:0009167,GO:0009168,GO:0009259,GO:0009260,GO:0009987,GO:0016874,GO:0016879,GO:0016884,GO:0018130,GO:0019438,GO:0019637,GO:0019693,GO:0034404,GO:0034641,GO:0034654,GO:0042278,GO:0042451,GO:0042455,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0044283,GO:0046037,GO:0046128,GO:0046129,GO:0046390,GO:0046483,GO:0055086,GO:0071704,GO:0072521,GO:0072522,GO:0090407,GO:1901068,GO:1901070,GO:1901135,GO:1901137,GO:1901293,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576,GO:1901657,GO:1901659 6.3.5.2 0.000000000000000000000000000000000000000000000000000000003389 207.0
DYD2_k127_4541414_2 Is involved in NO detoxification in an aerobic process, termed nitric oxide dioxygenase (NOD) reaction that utilizes O(2) and NAD(P)H to convert NO to nitrate, which protects the bacterium from various noxious nitrogen compounds. Therefore, plays a central role in the inducible response to nitrosative stress - - - 0.0000000000000000000000000000000000000000000007703 174.0
DYD2_k127_4541414_3 permease - - - 0.000000000000000000000000000000000000000000002204 181.0
DYD2_k127_4541414_4 Domain of unknown function DUF87 K06915,K19172 - - 0.0000000000000000000000000000000000000000005626 160.0
DYD2_k127_4541414_5 Large family of predicted nucleotide-binding domains K07158 - - 0.0000000003422 70.0
DYD2_k127_4562976_0 Converts heme B (protoheme IX) to heme O by substitution of the vinyl group on carbon 2 of heme B porphyrin ring with a hydroxyethyl farnesyl side group K02257 - 2.5.1.141 0.0000000000000000000000000000000000000000000000000000000000004488 224.0
DYD2_k127_4562976_1 Diphthamide synthase K06927 - 6.3.1.14 0.00000000000000000000000000000000000000001758 161.0
DYD2_k127_4562976_2 Major facilitator superfamily - - - 0.000000000000000000000000000001361 137.0
DYD2_k127_4562976_3 Catalyzes the oxidation of the C8 methyl side group on heme O porphyrin ring into a formyl group K02259 - - 0.0000000000000000004385 100.0
DYD2_k127_4566084_0 Protein of unknown function (DUF2867) - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002311 522.0
DYD2_k127_4566084_1 3'-5' exoribonuclease that releases 5'-nucleoside monophosphates and is involved in maturation of structured RNAs K12573 - - 0.0000000000000000000000000000000000000000000000000000000002679 231.0
DYD2_k127_4566084_2 PFAM Radical SAM domain protein K07129 - - 0.0000000000000000000000000000000000000000000000000009714 192.0
DYD2_k127_4566084_3 Involved in the gluconeogenesis. Catalyzes stereospecifically the conversion of dihydroxyacetone phosphate (DHAP) to D-glyceraldehyde-3-phosphate (G3P) K01803 - 5.3.1.1 0.00000000000000000000000000000000000000000005369 169.0
DYD2_k127_4566084_4 CBS domain containing protein K03699 - - 0.00000000000000000000000000000000000000000006837 173.0
DYD2_k127_4566084_5 Belongs to the small heat shock protein (HSP20) family K13993 - - 0.00000000000000000000000000001172 126.0
DYD2_k127_4566084_6 Belongs to the 'phage' integrase family - - - 0.0002948 47.0
DYD2_k127_4574067_0 copper-translocating P-type ATPase K17686 - 3.6.3.54 6.719e-292 915.0
DYD2_k127_4574067_1 DNA polymerase elongation subunit (Family B) K02319 - 2.7.7.7 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000002673 308.0
DYD2_k127_4574067_2 integrase family - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000007612 284.0
DYD2_k127_4574067_3 Methyltransferase - - - 0.00000000000000000000000000000000000000000000000000000000000000000001505 243.0
DYD2_k127_4574067_4 - - - - 0.00000000000000000000000000000000002445 141.0
DYD2_k127_4574067_5 glyoxalase bleomycin resistance protein dioxygenase - - - 0.0000000000000001071 85.0
DYD2_k127_4574067_6 - - - - 0.0000000000006043 79.0
DYD2_k127_4603573_0 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain K00074 - 1.1.1.157 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000005873 291.0
DYD2_k127_4603573_1 Enoyl-CoA hydratase/isomerase K01715 - 4.2.1.17 0.0000000000000000000000000000000000000000000000000000007968 203.0
DYD2_k127_4603573_2 amidohydrolase K07045 - - 0.000000000000000000000000000000000000000000000000004116 192.0
DYD2_k127_4603573_3 Prolyl oligopeptidase family - - - 0.00000000000000000000004637 110.0
DYD2_k127_4620414_0 Belongs to the universal ribosomal protein uS2 family K02967 GO:0000028,GO:0000447,GO:0000460,GO:0000461,GO:0000462,GO:0000466,GO:0000469,GO:0000478,GO:0000479,GO:0003674,GO:0003735,GO:0005198,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0006139,GO:0006364,GO:0006396,GO:0006412,GO:0006518,GO:0006725,GO:0006807,GO:0006996,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0015935,GO:0016043,GO:0016070,GO:0016072,GO:0019538,GO:0022607,GO:0022613,GO:0022618,GO:0022626,GO:0022627,GO:0030490,GO:0031123,GO:0031125,GO:0032991,GO:0034470,GO:0034622,GO:0034641,GO:0034645,GO:0034660,GO:0042254,GO:0042255,GO:0042274,GO:0043043,GO:0043170,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043603,GO:0043604,GO:0043628,GO:0043933,GO:0044085,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:0046483,GO:0065003,GO:0070925,GO:0071704,GO:0071826,GO:0071840,GO:0090304,GO:0090305,GO:0090501,GO:0090502,GO:1901360,GO:1901564,GO:1901566,GO:1901576,GO:1990904 - 0.000000000000000000000000000000000000000000000000000000000000000000000000000004281 268.0
DYD2_k127_4620414_1 Anthranilate synthase K01665 GO:0000162,GO:0000287,GO:0003674,GO:0003824,GO:0004049,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005950,GO:0006082,GO:0006520,GO:0006568,GO:0006575,GO:0006576,GO:0006586,GO:0006725,GO:0006732,GO:0006760,GO:0006807,GO:0008150,GO:0008152,GO:0008483,GO:0008652,GO:0009058,GO:0009072,GO:0009073,GO:0009108,GO:0009308,GO:0009309,GO:0009396,GO:0009987,GO:0016053,GO:0016740,GO:0016769,GO:0016829,GO:0016830,GO:0016833,GO:0018130,GO:0019438,GO:0019752,GO:0032991,GO:0034641,GO:0042398,GO:0042401,GO:0042430,GO:0042435,GO:0042558,GO:0042559,GO:0043167,GO:0043169,GO:0043436,GO:0043603,GO:0043604,GO:0044106,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0044283,GO:0044424,GO:0044444,GO:0044464,GO:0046219,GO:0046394,GO:0046483,GO:0046653,GO:0046654,GO:0046820,GO:0046872,GO:0051186,GO:0051188,GO:0071704,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576,GO:1901605,GO:1901607,GO:1902494 2.6.1.85 0.00000000000000000000000000000000000000000000000000000000000000002061 240.0
DYD2_k127_4620414_2 phosphatidylinositol metabolic process - - - 0.000000000000000000000000000000000000000004889 171.0
DYD2_k127_4620414_3 DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates K03055 - 2.7.7.6 0.000000000000001451 79.0
DYD2_k127_4620414_4 CDP-alcohol phosphatidyltransferase K00995,K00999 GO:0003674,GO:0003824,GO:0003881,GO:0003882,GO:0005575,GO:0005618,GO:0005622,GO:0005623,GO:0005737,GO:0006629,GO:0006644,GO:0006650,GO:0006793,GO:0006796,GO:0008150,GO:0008152,GO:0008610,GO:0008654,GO:0009058,GO:0009987,GO:0016740,GO:0016772,GO:0016780,GO:0017169,GO:0019637,GO:0030312,GO:0040007,GO:0044237,GO:0044238,GO:0044249,GO:0044255,GO:0044424,GO:0044464,GO:0045017,GO:0046474,GO:0046486,GO:0071704,GO:0071944,GO:0090407,GO:1901576 2.7.8.11,2.7.8.5 0.0001731 55.0
DYD2_k127_4630223_0 Diphthamide K07561 - 2.5.1.108 0.000000000000000000000000000000000000000000000000000000000000000000000000000001939 274.0
DYD2_k127_4630223_1 RNA methylase K07579 - - 0.0000000000000000000000000000001199 138.0
DYD2_k127_4630223_2 regulation of pentose-phosphate shunt K06236,K19069 - 1.1.99.18 0.00000000000000000000000000001304 129.0
DYD2_k127_4630223_3 - - - - 0.0000361 56.0
DYD2_k127_4655028_0 Putative RNA-binding Domain in PseudoUridine synthase and Archaeosine transglycosylase K07575 GO:0001731,GO:0002181,GO:0002183,GO:0002188,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0006412,GO:0006413,GO:0006518,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0015935,GO:0016043,GO:0019538,GO:0022607,GO:0022613,GO:0022618,GO:0022626,GO:0022627,GO:0032991,GO:0034622,GO:0034641,GO:0034645,GO:0043043,GO:0043170,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043603,GO:0043604,GO:0043933,GO:0044085,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:0065003,GO:0071704,GO:0071826,GO:0071840,GO:1901564,GO:1901566,GO:1901576,GO:1990904 - 0.0000000000000000000000000000000000001264 149.0
DYD2_k127_4655028_1 Pfam:DUF552 K09152 - - 0.000000000000000000000006149 109.0
DYD2_k127_4748953_0 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain K00074 - 1.1.1.157 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006482 433.0
DYD2_k127_4748953_1 Belongs to the peptidase M48B family K03799 - - 0.00000000000000000000000000000000000000000000000000000000000000003556 237.0
DYD2_k127_4748953_2 Catalyzes the reversible conversion of ribose-5- phosphate to ribulose 5-phosphate K01807 - 5.3.1.6 0.000000000000000000000000000000000000000000000000000000000000005575 227.0
DYD2_k127_4748953_3 LemA family K03744 - - 0.0000000000000000000000000000000000000000000000000002939 192.0
DYD2_k127_4748953_4 Acetyltransferase (GNAT) domain - - - 0.000004764 58.0
DYD2_k127_4772970_0 domain, Protein - - - 0.00000000000000000000000000000000000000000000000000000000000000000003039 267.0
DYD2_k127_4772970_1 Helix-turn-helix domain - - - 0.000001244 59.0
DYD2_k127_4797856_0 Helix-hairpin-helix DNA-binding motif class 1 - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003466 412.0
DYD2_k127_4797856_1 dehydrogenase complex catalyzes the overall conversion of - - - 0.0000000000000000000000000000000000000002581 171.0
DYD2_k127_4797856_2 Involved in DNA repair and in homologous recombination. May regulate the cleavage reactions of the branch-structured DNA. Has a very weak ATPase activity that is not stimulated by DNA. Binds DNA but does not promote DNA strands exchange K04484 - - 0.000000000000000000000000000000006163 141.0
DYD2_k127_4797856_3 Reversible hydration of carbon dioxide K01673 - 4.2.1.1 0.000000000000000000000000000002413 130.0
DYD2_k127_4797856_4 phosphoglycerate mutase K02226,K22316 - 3.1.26.4,3.1.3.73 0.00000000000000000000000000002289 126.0
DYD2_k127_4797856_5 EamA-like transporter family - - - 0.00000000000000000004457 100.0
DYD2_k127_4797856_6 - - - - 0.000006671 59.0
DYD2_k127_4806251_0 Luciferase-like monooxygenase - - - 0.00000000000000000000000000000000000000000000000000000000000000007108 232.0
DYD2_k127_4806251_1 L-asparaginase II - - - 0.000000000000000000000000001551 128.0
DYD2_k127_4818707_0 Succinyl-CoA synthetase functions in the citric acid cycle (TCA), coupling the hydrolysis of succinyl-CoA to the synthesis of either ATP or GTP and thus represents the only step of substrate-level phosphorylation in the TCA. The beta subunit provides nucleotide specificity of the enzyme and binds the substrate succinate, while the binding sites for coenzyme A and phosphate are found in the alpha subunit K01903 - 6.2.1.5 0.0000000000000000000000724 102.0
DYD2_k127_4818707_1 SnoaL-like polyketide cyclase - - - 0.00000000000000000001044 98.0
DYD2_k127_4818707_2 CoA binding domain K01902 - 6.2.1.5 0.0000000000000000001041 90.0
DYD2_k127_4818707_3 Toxic component of a toxin-antitoxin (TA) module. An RNase - - - 0.00000000009656 67.0
DYD2_k127_4830694_0 Fic/DOC family K07341 - - 0.0000000000000005805 81.0
DYD2_k127_4830694_1 Pfam:DUF1628 - - - 0.000002982 55.0
DYD2_k127_4832103_0 Aldo/keto reductase family - - - 0.00000000000000000000000000000000000000000000000000000000000000000001144 256.0
DYD2_k127_4832103_1 Polyketide cyclase / dehydrase and lipid transport - - - 0.000000000000000000000000000000000000000000000000000000000003094 213.0
DYD2_k127_4832103_2 transferase activity, transferring acyl groups other than amino-acyl groups - - - 0.00000000000000000000000000004157 130.0
DYD2_k127_4832103_3 4-amino-4-deoxy-L-arabinose transferase activity - - - 0.0000000000000000000000000007086 124.0
DYD2_k127_4832103_4 Electron transfer flavoprotein-ubiquinone oxidoreductase, 4Fe-4S - - - 0.0000000000000000000000001923 107.0
DYD2_k127_4832103_5 Protein of unknown function (DUF2723) - - - 0.00000000000000000000009946 113.0
DYD2_k127_4832103_6 Protein of unknown function (DUF1272) K09984 - - 0.0000001146 59.0
DYD2_k127_4832103_7 Sulfur transfer protein involved in thiamine biosynthesis K03154,K21947 GO:0003674,GO:0006464,GO:0006807,GO:0008150,GO:0008152,GO:0009987,GO:0019538,GO:0031386,GO:0032446,GO:0036211,GO:0043170,GO:0043412,GO:0044237,GO:0044238,GO:0044260,GO:0044267,GO:0070647,GO:0071704,GO:1901564 2.8.1.15 0.0001834 50.0
DYD2_k127_4834417_0 Xylose isomerase-like TIM barrel K01151 - 3.1.21.2 0.0000000000000000000000000000000000000000000000000000000000000004253 237.0
DYD2_k127_4834417_1 PFAM sugar isomerase (SIS) K08094 - 5.3.1.27 0.0000000000000000000000000000000002479 138.0
DYD2_k127_4834417_2 - - - - 0.00000004685 62.0
DYD2_k127_4839326_0 Function in general translation initiation by promoting the binding of the formylmethionine-tRNA to ribosomes. Seems to function along with eIF-2 K03243 - - 2.783e-194 623.0
DYD2_k127_4839326_1 PFAM Methyltransferase type 11 - - - 0.000000000000000000000000004128 125.0
DYD2_k127_4839326_2 Pyruvate phosphate dikinase - - - 0.0000004238 58.0
DYD2_k127_4845805_0 EamA-like transporter family - - - 0.000000008318 59.0
DYD2_k127_4859548_0 - - - - 0.0000000002276 73.0
DYD2_k127_4859548_1 PFAM thiamine pyrophosphate protein domain protein TPP-binding K00175 - 1.2.7.11,1.2.7.3 0.000001283 53.0
DYD2_k127_486287_0 mannose-ethanolamine phosphotransferase activity - - - 0.000000000000000000008484 106.0
DYD2_k127_486287_1 polysaccharide biosynthetic process - - - 0.000000002251 70.0
DYD2_k127_486287_2 Belongs to the small heat shock protein (HSP20) family K13993 - - 0.0002365 52.0
DYD2_k127_4863350_0 Multi-copper - - - 0.00000000000000000000000000000000000000000000000000000000000002565 231.0
DYD2_k127_4867995_0 Catalyzes the ATP- and formate-dependent formylation of 5-aminoimidazole-4-carboxamide-1-beta-d-ribofuranosyl 5'- monophosphate (AICAR) to 5-formaminoimidazole-4-carboxamide-1- beta-d-ribofuranosyl 5'-monophosphate (FAICAR) in the absence of folates K06863 - 6.3.4.23 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003371 437.0
DYD2_k127_4867995_1 Produces ATP from ADP in the presence of a proton gradient across the membrane K02120 - - 0.000000000000000000000000000000000000000000000000000000000000001507 226.0
DYD2_k127_4867995_2 Methyltransferase involved in ribosomal biogenesis. Specifically catalyzes the N1-methylation of the pseudouridine corresponding to position 914 in M.jannaschii 16S rRNA K14568 GO:0000154,GO:0000462,GO:0001510,GO:0003674,GO:0003676,GO:0003723,GO:0003824,GO:0005488,GO:0006139,GO:0006364,GO:0006396,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0008168,GO:0008173,GO:0008649,GO:0008757,GO:0009451,GO:0009987,GO:0010467,GO:0016070,GO:0016072,GO:0016740,GO:0016741,GO:0019843,GO:0022613,GO:0030490,GO:0031167,GO:0032259,GO:0034470,GO:0034641,GO:0034660,GO:0042254,GO:0042274,GO:0043170,GO:0043412,GO:0043414,GO:0044085,GO:0044237,GO:0044238,GO:0044260,GO:0046483,GO:0070037,GO:0070475,GO:0071704,GO:0071840,GO:0090304,GO:0097159,GO:0140098,GO:0140102,GO:1901360,GO:1901363 2.1.1.260 0.000000000000000000000000000000000002094 146.0
DYD2_k127_4867995_3 5-formyltetrahydrofolate cyclo-ligase family K01934 - 6.3.3.2 0.00000000000000000000000002737 119.0
DYD2_k127_4867995_4 - - - - 0.0000000000000000000000000501 121.0
DYD2_k127_4902649_0 Acetyl-CoA carboxylase, carboxyltransferase component (subunits alpha and beta) - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002505 409.0
DYD2_k127_4902649_1 An AccC homodimer forms the biotin carboxylase subunit of the acetyl CoA carboxylase, an enzyme that catalyzes the formation of malonyl-CoA, which in turn controls the rate of fatty acid metabolism K01961 - 6.3.4.14,6.4.1.2 0.00000000000000000000000000000000000000000000000000000000000002097 224.0
DYD2_k127_4902649_2 Oxaloacetate decarboxylase alpha subunit K01960 - 6.4.1.1 0.0000000000007292 79.0
DYD2_k127_495952_0 Anticodon-binding domain of tRNA K01873 - 6.1.1.9 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001427 507.0
DYD2_k127_495952_1 AAA domain, putative AbiEii toxin, Type IV TA system K01990 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000008315 282.0
DYD2_k127_495952_2 ABC-2 family transporter protein K01992 - - 0.000000000000000001246 97.0
DYD2_k127_495952_3 EamA-like transporter family - - - 0.000002548 59.0
DYD2_k127_4968081_0 - - - - 0.00000000094 62.0
DYD2_k127_4968081_1 PIN domain - - - 0.00006065 51.0
DYD2_k127_4979308_0 Catalyzes the attachment of serine to tRNA(Ser). Is also able to aminoacylate tRNA(Sec) with serine, to form the misacylated tRNA L-seryl-tRNA(Sec), which will be further converted into selenocysteinyl-tRNA(Sec) K01875 - 6.1.1.11 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001392 458.0
DYD2_k127_4979308_1 Isocitrate isopropylmalate dehydrogenase K00052 - 1.1.1.85 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001998 342.0
DYD2_k127_4979308_10 - - - - 0.00000002314 63.0
DYD2_k127_4979308_2 Could be responsible for synthesis of pseudouridine from uracil-13 in transfer RNAs K06176 GO:0001522,GO:0003674,GO:0003824,GO:0006139,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0009451,GO:0009982,GO:0009987,GO:0016070,GO:0016853,GO:0016866,GO:0034641,GO:0043170,GO:0043412,GO:0044237,GO:0044238,GO:0046483,GO:0071704,GO:0090304,GO:1901360 5.4.99.27 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000451 293.0
DYD2_k127_4979308_3 Quinolinate synthetase A protein K03517 - 2.5.1.72 0.0000000000000000000000000000000000000000000000000000000000000000000000000000006599 278.0
DYD2_k127_4979308_4 COG0382 4-hydroxybenzoate polyprenyltransferase and related prenyltransferases - - - 0.0000000000000000000000000000000000000000000000000000004915 205.0
DYD2_k127_4979308_5 methyltransferase - - - 0.000000000000000000000000000008551 136.0
DYD2_k127_4979308_6 Catalyzes the formation of isopentenyl diphosphate (IPP), the building block of all isoprenoids K06981 - 2.7.4.26 0.0000000000000000000004453 109.0
DYD2_k127_4979308_7 DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates K03056 - 2.7.7.6 0.00000000000002704 76.0
DYD2_k127_4979308_8 Glycosyltransferase WbsX - - - 0.0000000000007538 83.0
DYD2_k127_4979308_9 Glycosyltransferase family 87 - - - 0.00000000000683 80.0
DYD2_k127_4996121_0 Aminotransferase K10907 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002554 552.0
DYD2_k127_4996121_1 dehydrogenase, E1 component K00161,K21416 - 1.2.4.1 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000002902 299.0
DYD2_k127_4996121_2 Transketolase, pyrimidine binding domain K00162 - 1.2.4.1 0.00000000188 63.0
DYD2_k127_49990_0 COG0183 Acetyl-CoA acetyltransferase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000005745 295.0
DYD2_k127_49990_1 Belongs to the alpha-IPM synthase homocitrate synthase family K10977 - 2.3.3.14 0.0000000000000001038 92.0
DYD2_k127_49990_2 COG3425 3-hydroxy-3-methylglutaryl CoA synthase K01641,K07068 - 2.3.3.10 0.0009022 49.0
DYD2_k127_50452_0 AAA domain, putative AbiEii toxin, Type IV TA system K09695 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000569 324.0
DYD2_k127_50452_1 ABC-2 type transporter K09694 - - 0.000000000000000000003403 96.0
DYD2_k127_50452_2 LVIVD repeat - - - 0.00000000000002311 86.0
DYD2_k127_50452_3 NurA - - - 0.000000001158 68.0
DYD2_k127_5046004_0 metal-dependent hydrolase with the TIM-barrel fold - - - 0.00000000000000000000000000000000000000000000000000000000001437 230.0
DYD2_k127_5070172_0 Aldolase/RraA K13831 - 4.1.2.43,5.3.1.27 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003585 455.0
DYD2_k127_5070172_1 COG0471 Di- and tricarboxylate transporters - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006215 410.0
DYD2_k127_5070172_2 Amidohydrolase K07045 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000002918 261.0
DYD2_k127_5070172_3 Carbon-nitrogen hydrolase - - - 0.0000000000000000000000000000000000000000000000002595 184.0
DYD2_k127_5070172_4 PFAM Major Facilitator Superfamily - - - 0.0000000000000000000000000000000000000000334 170.0
DYD2_k127_5070172_5 vacuolar iron transporter - GO:0000041,GO:0003674,GO:0005215,GO:0005384,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005773,GO:0005774,GO:0006810,GO:0006811,GO:0006812,GO:0006828,GO:0006873,GO:0006875,GO:0006879,GO:0006880,GO:0008150,GO:0008324,GO:0009987,GO:0010035,GO:0010038,GO:0010039,GO:0015075,GO:0015318,GO:0016020,GO:0019725,GO:0022857,GO:0022890,GO:0030001,GO:0030003,GO:0030026,GO:0031090,GO:0034220,GO:0042221,GO:0042592,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0044422,GO:0044424,GO:0044437,GO:0044444,GO:0044446,GO:0044464,GO:0046873,GO:0046915,GO:0046916,GO:0048878,GO:0050801,GO:0050896,GO:0051179,GO:0051234,GO:0051235,GO:0051238,GO:0051641,GO:0051651,GO:0051716,GO:0055065,GO:0055071,GO:0055072,GO:0055076,GO:0055080,GO:0055082,GO:0055085,GO:0065007,GO:0065008,GO:0070887,GO:0071241,GO:0071248,GO:0071281,GO:0071421,GO:0097577,GO:0098588,GO:0098655,GO:0098660,GO:0098662,GO:0098771,GO:0098805 - 0.000000000000000000000001834 117.0
DYD2_k127_5070172_6 OST-HTH/LOTUS domain - - - 0.0000000000000006871 86.0
DYD2_k127_507080_0 Pyruvate ferredoxin oxidoreductase and related K00174 - 1.2.7.11,1.2.7.3 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001173 362.0
DYD2_k127_507080_1 Pyruvate ferredoxin oxidoreductase beta subunit C terminal K00175 - 1.2.7.11,1.2.7.3 0.000000000000000000000000000000000000000000000000000000000000000000000000383 269.0
DYD2_k127_5076722_0 Possesses two activities a DNA synthesis (polymerase) and an exonucleolytic activity that degrades single-stranded DNA in the 3'- to 5'-direction. Has a template-primer preference which is characteristic of a replicative DNA polymerase K02322 - 2.7.7.7 7.729e-197 628.0
DYD2_k127_5076722_1 The UvrABC repair system catalyzes the recognition and processing of DNA lesions. UvrC both incises the 5' and 3' sides of the lesion. The N-terminal half is responsible for the 3' incision and the C-terminal half is responsible for the 5' incision K03703 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003579 369.0
DYD2_k127_5076722_2 phenylalanyl-tRNA synthetase, beta subunit K01890 - 6.1.1.20 0.00000000000000000000001805 104.0
DYD2_k127_5089911_0 RibD C-terminal domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001156 342.0
DYD2_k127_5089911_1 Alkyl hydroperoxide reductase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000001069 250.0
DYD2_k127_5089911_10 PPIases accelerate the folding of proteins. It catalyzes the cis-trans isomerization of proline imidic peptide bonds in oligopeptides K01802 - 5.2.1.8 0.000000000000000002798 96.0
DYD2_k127_5089911_11 Putative zinc- or iron-chelating domain K06940 - - 0.000000000000000007814 93.0
DYD2_k127_5089911_12 Belongs to the eukaryotic ribosomal protein eS31 family K02977 - - 0.00000000000006329 73.0
DYD2_k127_5089911_13 Belongs to the eukaryotic ribosomal protein eS24 family K02974 - - 0.000000000001544 71.0
DYD2_k127_5089911_14 TCP-1/cpn60 chaperonin family - - - 0.00000006608 65.0
DYD2_k127_5089911_15 DNA binding protein - - - 0.0000006749 59.0
DYD2_k127_5089911_16 HxlR-like helix-turn-helix - - - 0.00003042 50.0
DYD2_k127_5089911_2 Non-canonical ABC transporter that contains transmembrane domains (TMD), which form a pore in the membrane, and an ATP-binding domain (NBD), which is responsible for energy generation. Confers resistance against macrolides K02003 - - 0.0000000000000000000000000000000000000000000000000000000000000000000002134 246.0
DYD2_k127_5089911_3 Putative FMN-binding domain K07734 - - 0.00000000000000000000000000000000000000000000000000000000000478 214.0
DYD2_k127_5089911_4 Domain of unknown function (DUF4442) - - - 0.000000000000000000000000000000000000000000000000000001035 205.0
DYD2_k127_5089911_5 FtsX-like permease family K02004 - - 0.000000000000000000000000000000000000000000000000002361 201.0
DYD2_k127_5089911_6 SMART Cystathionine beta-synthase, core - - - 0.00000000000000000000000000000000000000007698 160.0
DYD2_k127_5089911_7 dUTPase K01494 - 3.5.4.13 0.00000000000000000000000000000001791 132.0
DYD2_k127_5089911_8 helix_turn_helix, Arsenical Resistance Operon Repressor - - - 0.0000000000000000000000000000001265 130.0
DYD2_k127_5089911_9 Non-catalytic component of the exosome, which is a complex involved in RNA degradation. Increases the RNA binding and the efficiency of RNA degradation. Helpful for the interaction of the exosome with A-poor RNAs K07573 - - 0.000000000000000000001043 102.0
DYD2_k127_5100858_0 Helix-hairpin-helix motif K07572 - - 0.000000000000000000000000000000000000000000000000002001 194.0
DYD2_k127_5100858_1 Belongs to the eukaryotic ribosomal protein eL21 family K02889 - - 0.0000000000000000002914 90.0
DYD2_k127_5100858_2 RNA polymerase K03051 - 2.7.7.6 0.000000003732 62.0
DYD2_k127_5100858_3 DNA-binding transcription factor activity K03892 - - 0.0004032 51.0
DYD2_k127_5175732_0 membrane K08971 - - 0.00000000000000000000000002623 122.0
DYD2_k127_5175732_1 protein conserved in archaea - - - 0.0000009166 57.0
DYD2_k127_5184129_0 Belongs to the eukaryotic ribosomal protein eS1 family K02984 GO:0002181,GO:0003674,GO:0003735,GO:0005198,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006412,GO:0006518,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0019538,GO:0034641,GO:0034645,GO:0043043,GO:0043170,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044424,GO:0044444,GO:0044464,GO:0071704,GO:1901564,GO:1901566,GO:1901576 - 0.0000000000000000000000000000000000000000005827 169.0
DYD2_k127_5204915_0 Fe-S oxidoreductase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001055 475.0
DYD2_k127_5204915_1 metallopeptidase activity - - - 0.000000000000000000000000002167 120.0
DYD2_k127_5204915_2 Belongs to the UPF0235 family K09131 - - 0.00000000001749 73.0
DYD2_k127_5204915_3 Tonb-dependent siderophore receptor K02014 - - 0.000004667 59.0
DYD2_k127_5204915_4 Required for correct processing of both the 5' and 3' ends of 5S rRNA precursor. Cleaves both sides of a double-stranded region yielding mature 5S rRNA in one step K05985,K07476 GO:0003674,GO:0003824,GO:0004518,GO:0004519,GO:0004521,GO:0004540,GO:0006139,GO:0006364,GO:0006396,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0009987,GO:0010467,GO:0016070,GO:0016072,GO:0016787,GO:0016788,GO:0016891,GO:0016893,GO:0022613,GO:0034470,GO:0034641,GO:0034660,GO:0042254,GO:0043170,GO:0043822,GO:0044085,GO:0044237,GO:0044238,GO:0046483,GO:0071704,GO:0071840,GO:0090304,GO:0090305,GO:0090501,GO:0090502,GO:0140098,GO:1901360 3.1.26.8 0.0000108 56.0
DYD2_k127_5333671_0 Aldo/keto reductase family - - - 0.00000000002781 64.0
DYD2_k127_537780_0 COG1012 NAD-dependent aldehyde dehydrogenases K00128 - 1.2.1.3 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007206 475.0
DYD2_k127_537780_1 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster K00266 - 1.4.1.13,1.4.1.14 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001345 342.0
DYD2_k127_537780_2 Belongs to the enoyl-CoA hydratase isomerase family K01715 - 4.2.1.17 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002982 320.0
DYD2_k127_537780_3 NAD(P)H-binding - - - 0.00000000000000000000000000000000000000000000000000001989 201.0
DYD2_k127_537780_4 Alpha beta hydrolase - - - 0.000000000000000000000000000000000000000000000004394 188.0
DYD2_k127_537780_5 EamA-like transporter family - - - 0.000000000000000000000000000000000000000000001779 181.0
DYD2_k127_537780_6 Enoyl-CoA hydratase/isomerase - - - 0.000000000000000000000000000000000000000005278 166.0
DYD2_k127_537780_7 Belongs to the thioredoxin family K03671 GO:0003674,GO:0003824,GO:0004791,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006950,GO:0006979,GO:0008150,GO:0008152,GO:0009636,GO:0009987,GO:0015035,GO:0015036,GO:0016209,GO:0016491,GO:0016651,GO:0016667,GO:0016668,GO:0016671,GO:0019725,GO:0033554,GO:0034599,GO:0042221,GO:0042592,GO:0044424,GO:0044444,GO:0044464,GO:0045454,GO:0047134,GO:0050789,GO:0050794,GO:0050896,GO:0051716,GO:0055114,GO:0065007,GO:0065008,GO:0070887,GO:0097237,GO:0098754,GO:0098869,GO:1990748 - 0.0000000000000000000000000003405 123.0
DYD2_k127_537780_8 PemK-like, MazF-like toxin of type II toxin-antitoxin system K07171 - - 0.00000000000000000000000006173 111.0
DYD2_k127_537780_9 response to nickel cation K07722 - - 0.00006325 49.0
DYD2_k127_539348_0 PFAM metal-dependent phosphohydrolase, HD sub domain K06885 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000007366 280.0
DYD2_k127_539348_1 Peptidase family M50 - - - 0.00000000000000000000000000000000000000000000000000000000000111 229.0
DYD2_k127_5394631_0 Membrane protein of unknown function DUF63 - - - 0.0000000000000000000114 106.0
DYD2_k127_5394631_1 Protein of unknown function (DUF3309) - - - 0.000000000000001662 78.0
DYD2_k127_5394631_2 protein conserved in archaea - - - 0.000004271 59.0
DYD2_k127_5409919_0 PFAM Haloacid dehalogenase domain protein hydrolase K07025,K20862 - 3.1.3.102,3.1.3.104 0.000000000000000000002894 104.0
DYD2_k127_5409919_1 PFAM Transmembrane exosortase (Exosortase_EpsH) - - - 0.0000000000007165 81.0
DYD2_k127_5409919_2 - - - - 0.0004015 52.0
DYD2_k127_5427269_0 COG1122 ABC-type cobalt transport system, ATPase component K16786,K16787 - - 0.0000000000000000003027 100.0
DYD2_k127_5427269_1 SMART regulatory protein, Crp K07730 - - 0.000000000000000008159 93.0
DYD2_k127_5427269_2 - - - - 0.00000001266 61.0
DYD2_k127_5432254_0 Belongs to the universal ribosomal protein uL16 family K02866 - - 0.0000000000000000000000000000000000000000000000000000002716 201.0
DYD2_k127_5432254_1 membrane - - - 0.000001669 53.0
DYD2_k127_54453_0 - - - - 0.00000003835 66.0
DYD2_k127_54453_1 Belongs to the glycosyl hydrolase 5 (cellulase A) family K01179,K19668 GO:0005575,GO:0005576 3.2.1.4,3.2.1.91 0.00000003835 66.0
DYD2_k127_5450153_0 Phosphatidylserine decarboxylase K01613 GO:0005575,GO:0005623,GO:0005886,GO:0016020,GO:0044464,GO:0071944 4.1.1.65 0.00000000000000000000000000000000000000003725 160.0
DYD2_k127_5450153_1 Belongs to the CDP-alcohol phosphatidyltransferase class-I family K17103 - 2.7.8.8 0.000000000000009078 87.0
DYD2_k127_5453871_0 Catalyzes the anti-1,4-elimination of the C-3 phosphate and the C-6 proR hydrogen from 5-enolpyruvylshikimate-3-phosphate (EPSP) to yield chorismate, which is the branch point compound that serves as the starting substrate for the three terminal pathways of aromatic amino acid biosynthesis. This reaction introduces a second double bond into the aromatic ring system K01736 - 4.2.3.5 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000005381 316.0
DYD2_k127_5453871_1 Catalyzes the transfer of the enolpyruvyl moiety of phosphoenolpyruvate (PEP) to the 5-hydroxyl of shikimate-3- phosphate (S3P) to produce enolpyruvyl shikimate-3-phosphate and inorganic phosphate K00800 - 2.5.1.19 0.0000000000000000000000000000000000000000000000000000000000000000000271 252.0
DYD2_k127_5453871_2 Catalyzes a transaldol reaction between 6-deoxy-5- ketofructose 1-phosphate (DKFP) and L-aspartate semialdehyde (ASA) with an elimination of hydroxypyruvaldehyde phosphate to yield 2- amino-3,7-dideoxy-D-threo-hept-6-ulosonate (ADH). Plays a key role in an alternative pathway of the biosynthesis of 3-dehydroquinate (DHQ), which is involved in the canonical pathway for the biosynthesis of aromatic amino acids K16306 - 2.2.1.10,4.1.2.13 0.0000000000000000000000000000000000000000000000000000000000002679 220.0
DYD2_k127_5453871_3 Catalyzes the oxidative deamination and cyclization of 2-amino-3,7-dideoxy-D-threo-hept-6-ulosonic acid (ADH) to yield 3- dehydroquinate (DHQ), which is fed into the canonical shikimic pathway of aromatic amino acid biosynthesis K11646 - 1.4.1.24 0.0000000000000000000000000000000000000000004152 178.0
DYD2_k127_5453871_4 Hexapeptide repeat of succinyl-transferase - - - 0.00000000000000000000000000000000003801 139.0
DYD2_k127_5453871_5 regulator of amino acid metabolism, contains ACT domain K07103 - - 0.000000000000000000000000000000002607 138.0
DYD2_k127_5453871_6 Involved in the biosynthesis of the chorismate, which leads to the biosynthesis of aromatic amino acids. Catalyzes the reversible NADPH linked reduction of 3-dehydroshikimate (DHSA) to yield shikimate (SA) K00014 - 1.1.1.25 0.000000000000000000000005031 119.0
DYD2_k127_5453871_7 Shikimate kinase K00891 GO:0000096,GO:0000097,GO:0003674,GO:0003824,GO:0004413,GO:0006082,GO:0006520,GO:0006555,GO:0006566,GO:0006790,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0008652,GO:0009058,GO:0009066,GO:0009067,GO:0009069,GO:0009086,GO:0009088,GO:0009092,GO:0009987,GO:0016053,GO:0016301,GO:0016310,GO:0016740,GO:0016772,GO:0016773,GO:0019202,GO:0019752,GO:0043436,GO:0044237,GO:0044238,GO:0044249,GO:0044272,GO:0044281,GO:0044283,GO:0046394,GO:0071704,GO:1901564,GO:1901566,GO:1901576,GO:1901605,GO:1901607 2.7.1.71 0.00000000001271 78.0
DYD2_k127_5455053_0 Catalyzes a salvage reaction resulting in the formation of IMP that is energically less costly than de novo synthesis K00759 GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0044424,GO:0044464 2.4.2.7 0.000000000000000000000000000000002132 137.0
DYD2_k127_5455053_1 Belongs to the low molecular weight phosphotyrosine protein phosphatase family K03741 - 1.20.4.1 0.00000000000009225 79.0
DYD2_k127_5455543_0 Pyridoxal-dependent decarboxylase, pyridoxal binding domain K01585 - 4.1.1.19 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003812 518.0
DYD2_k127_5455543_1 Sarcosine oxidase K00303 - 1.5.3.1 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004069 366.0
DYD2_k127_5455543_2 PFAM ATP-binding region, ATPase domain protein K07636 - 2.7.13.3 0.0000000000000000000000000000000000000000005013 177.0
DYD2_k127_5455543_3 Stage II sporulation protein E (SpoIIE) K07315 - 3.1.3.3 0.0000000000000000005086 102.0
DYD2_k127_5455543_4 PFAM BFD-like 2Fe-2S -binding - - - 0.00000000000000004277 86.0
DYD2_k127_5455543_5 Transcriptional regulator K11924 - - 0.0000000006149 70.0
DYD2_k127_5455543_6 COG1938 Archaeal enzymes of ATP-grasp superfamily K06869 - - 0.0005996 51.0
DYD2_k127_5460882_0 Fumarylacetoacetate (FAA) hydrolase family - - - 0.000000000000000000000000000000000000000001865 160.0
DYD2_k127_5460882_1 DNA polymerase III K02342 - 2.7.7.7 0.000000000000000000000000002622 121.0
DYD2_k127_5460882_2 Transcriptional regulator - - - 0.000000000000000000003819 100.0
DYD2_k127_5460882_3 archaeal Zn-finger protein - - - 0.00000003762 63.0
DYD2_k127_5460882_4 - - - - 0.0000003022 54.0
DYD2_k127_547112_0 Binds directly to 23S rRNA. Probably involved in E site tRNA release K02863 GO:0000470,GO:0003674,GO:0003676,GO:0003723,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0006139,GO:0006364,GO:0006396,GO:0006412,GO:0006518,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0015934,GO:0016070,GO:0016072,GO:0019538,GO:0022613,GO:0022625,GO:0022626,GO:0032991,GO:0034470,GO:0034641,GO:0034645,GO:0034660,GO:0042254,GO:0042273,GO:0043043,GO:0043170,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043603,GO:0043604,GO:0044085,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:0046483,GO:0071704,GO:0071840,GO:0090304,GO:0097159,GO:1901360,GO:1901363,GO:1901564,GO:1901566,GO:1901576,GO:1990904 - 0.000000000000000000000000000000000000000000000000000000000000000000005567 241.0
DYD2_k127_547112_1 Forms part of the ribosomal stalk, playing a central role in the interaction of the ribosome with GTP-bound translation factors K02864 - - 0.000000000000000000000000000000000000000000000000000000000000000000008457 248.0
DYD2_k127_547112_2 Forms part of the ribosomal stalk, playing a central role in the interaction of the ribosome with GTP-bound translation factors K02869 - - 0.0000000000000000004866 91.0
DYD2_k127_5501733_0 Dehydrogenase E1 component K00161,K00166 - 1.2.4.1,1.2.4.4 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000224 324.0
DYD2_k127_5501733_1 Pyruvate 2-oxoglutarate dehydrogenase complex dehydrogenase (E1) component eukaryotic type beta subunit K00167 - 1.2.4.4 0.0000000000000000000000306 104.0
DYD2_k127_5501733_2 amino acid activation for nonribosomal peptide biosynthetic process - - - 0.00001026 59.0
DYD2_k127_5507448_0 Involved in targeting and insertion of nascent membrane proteins into the cytoplasmic membrane. Binds to the hydrophobic signal sequence of the ribosome-nascent chain (RNC) as it emerges from the ribosomes. The SRP-RNC complex is then targeted to the cytoplasmic membrane where it interacts with the SRP receptor FtsY K03106 - 3.6.5.4 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003206 440.0
DYD2_k127_5507448_1 Integral membrane protein DUF92 - - - 0.0000000000000000000006605 104.0
DYD2_k127_550762_0 Acyl-CoA dehydrogenase, C-terminal domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009039 385.0
DYD2_k127_550762_1 COG1077 Actin-like ATPase involved in cell morphogenesis - - - 0.00000000000000000000000000000000000008001 145.0
DYD2_k127_5508949_0 Belongs to the DEAD box helicase family K05592 - 3.6.4.13 0.00000000000000000000000000000000000000000000000000000000000000000000002006 256.0
DYD2_k127_5508949_1 metal cluster binding K06940 - - 0.000000000000002064 83.0
DYD2_k127_5521078_0 aconitate hydratase K01681 - 4.2.1.3 1.827e-320 995.0
DYD2_k127_5521078_1 Bacterial alpha-L-rhamnosidase 6 hairpin glycosidase domain - - - 0.0000000000000000000000000000000000000000000000002052 196.0
DYD2_k127_5521078_2 Important for reducing fluoride concentration in the cell, thus reducing its toxicity K06199 - - 0.0000000000000000001808 93.0
DYD2_k127_555723_0 TIGRFAM ABC transporter, periplasmic binding protein, thiB subfamily K02064 - - 0.0000000000000000000000000000000000000000000000000005318 200.0
DYD2_k127_555723_1 Transcriptional regulator K22206 - - 0.00000000000000006784 86.0
DYD2_k127_5629024_0 Transcriptional regulator, TrmB - - - 0.0000000000000001559 93.0
DYD2_k127_5629024_1 Histidine kinase-, DNA gyrase B-, and HSP90-like - - - 0.0000000000002929 80.0
DYD2_k127_5629024_2 Response regulator, receiver - - - 0.000000000002846 72.0
DYD2_k127_5629024_3 Winged helix-turn-helix DNA-binding - - - 0.00001187 53.0
DYD2_k127_5632813_0 Belongs to the RtcB family K14415 - 6.5.1.3 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002618 376.0
DYD2_k127_5632813_1 Structure-specific nuclease with 5'-flap endonuclease and 5'-3' exonuclease activities involved in DNA replication and repair. During DNA replication, cleaves the 5'-overhanging flap structure that is generated by displacement synthesis when DNA polymerase encounters the 5'-end of a downstream Okazaki fragment. Binds the unpaired 3'-DNA end and kinks the DNA to facilitate 5' cleavage specificity. Cleaves one nucleotide into the double- stranded DNA from the junction in flap DNA, leaving a nick for ligation. Also involved in the base excision repair (BER) pathway. Acts as a genome stabilization factor that prevents flaps from equilibrating into structurs that lead to duplications and deletions. Also possesses 5'-3' exonuclease activity on nicked or gapped double-stranded DNA K04799 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000005141 305.0
DYD2_k127_5632813_2 SMART Elongator protein 3 MiaB NifB K06936 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000003647 268.0
DYD2_k127_5632813_3 Patch-forming domain C2 of tRNA-guanine transglycosylase K07557 GO:0002927,GO:0006139,GO:0006396,GO:0006399,GO:0006400,GO:0006725,GO:0006807,GO:0008033,GO:0008150,GO:0008152,GO:0009058,GO:0009451,GO:0009987,GO:0010467,GO:0016070,GO:0034470,GO:0034641,GO:0034660,GO:0043170,GO:0043412,GO:0044237,GO:0044238,GO:0046483,GO:0071704,GO:0090304,GO:1901360 2.6.1.97 0.00000000000000000000000000000000000000000000000000000000000000000005927 255.0
DYD2_k127_5632813_4 Peptidase family M28 - - - 0.00000000000000000000000000000001348 140.0
DYD2_k127_5632813_5 NUDIX domain - - - 0.00000000000009661 76.0
DYD2_k127_5632813_6 PFAM Uncharacterised protein family UPF0150 - - - 0.000000000001423 71.0
DYD2_k127_5632813_7 HicA toxin of bacterial toxin-antitoxin, - - - 0.0000000005384 63.0
DYD2_k127_5646723_0 Involved in the TCA cycle. Catalyzes the stereospecific interconversion of fumarate to L-malate K01679 - 4.2.1.2 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001893 495.0
DYD2_k127_5646723_1 HicB_like antitoxin of bacterial toxin-antitoxin system - - - 0.00000000000000001475 84.0
DYD2_k127_5652020_0 acyl-CoA dehydrogenase K00248 - 1.3.8.1 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004617 394.0
DYD2_k127_5658184_0 Sliding clamp subunit that acts as a moving platform for DNA processing. Responsible for tethering the catalytic subunit of DNA polymerase and other proteins to DNA during high-speed replication K04802 GO:0003674,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0006139,GO:0006259,GO:0006260,GO:0006261,GO:0006271,GO:0006272,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0016070,GO:0022616,GO:0030234,GO:0030337,GO:0032991,GO:0034641,GO:0034645,GO:0042802,GO:0043170,GO:0043626,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044424,GO:0044464,GO:0044796,GO:0046483,GO:0050790,GO:0065007,GO:0065009,GO:0071704,GO:0090304,GO:0098772,GO:1901360,GO:1901576 - 0.000000000000000000000000000000000000000000000000000000000000000000000007517 253.0
DYD2_k127_5658184_1 Belongs to the eukaryotic ribosomal protein eL15 family K02877 - - 0.00000000000000000000000000000000000000000000000000000000000007054 219.0
DYD2_k127_5658184_2 Reverse transcriptase-like K03469 - 3.1.26.4 0.0000000000000000000000000000148 123.0
DYD2_k127_5658184_3 helix_turn_helix, Arsenical Resistance Operon Repressor - - - 0.00000000003123 74.0
DYD2_k127_5658184_4 Involved in the biosynthesis of isoprenoids. Catalyzes the 1,3-allylic rearrangement of the homoallylic substrate isopentenyl (IPP) to its allylic isomer, dimethylallyl diphosphate (DMAPP) K01823 - 5.3.3.2 0.0000000008171 62.0
DYD2_k127_5661602_0 ABC transporter, transmembrane region K06147,K11085 - - 1.235e-228 725.0
DYD2_k127_5661602_1 ribosomal protein S15 K02956 GO:0003674,GO:0003676,GO:0003723,GO:0003735,GO:0005198,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0006412,GO:0006518,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0015935,GO:0019538,GO:0019843,GO:0022626,GO:0022627,GO:0032991,GO:0034641,GO:0034645,GO:0043043,GO:0043170,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:0070181,GO:0071704,GO:0097159,GO:1901363,GO:1901564,GO:1901566,GO:1901576,GO:1990904 - 0.000000000000000000000000000000000000000001094 160.0
DYD2_k127_5661602_2 Transcription elongation factor Spt5 K02601 - - 0.00000000000000000000000000000000000002036 153.0
DYD2_k127_5661602_3 archaeal coiled-coil protein - - - 0.000000000003161 77.0
DYD2_k127_5661602_4 - - - - 0.0000001248 61.0
DYD2_k127_5672345_0 Catalyzes the conversion of urocanate to 4-imidazolone- 5-propionate K01712 - 4.2.1.49 2.554e-204 656.0
DYD2_k127_5672345_1 ATPase which is responsible for recognizing, binding, unfolding and translocation of substrate proteins into the archaeal 20S proteasome core particle. Is essential for opening the gate of the 20S proteasome via an interaction with its C- terminus, thereby allowing substrate entry and access to the site of proteolysis. Thus, the C-termini of the proteasomal ATPase function like a 'key in a lock' to induce gate opening and therefore regulate proteolysis. Unfolding activity requires energy from ATP hydrolysis, whereas ATP binding alone promotes ATPase-20S proteasome association which triggers gate opening, and supports translocation of unfolded substrates K03420 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003412 423.0
DYD2_k127_5672345_10 PFAM helix-turn-helix domain protein K03627 - - 0.0000000000000001495 94.0
DYD2_k127_5672345_11 Domain of unknown function (DUF4332) - - - 0.000000000004431 78.0
DYD2_k127_5672345_2 Protein kinase domain K08851,K15904 GO:0000408,GO:0002949,GO:0005575,GO:0005622,GO:0005623,GO:0006139,GO:0006396,GO:0006399,GO:0006400,GO:0006725,GO:0006807,GO:0008033,GO:0008150,GO:0008152,GO:0009451,GO:0009987,GO:0010467,GO:0016070,GO:0032991,GO:0034470,GO:0034641,GO:0034660,GO:0043170,GO:0043412,GO:0044237,GO:0044238,GO:0044424,GO:0044464,GO:0046483,GO:0070525,GO:0071704,GO:0090304,GO:1901360 2.3.1.234,2.7.11.1 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002105 348.0
DYD2_k127_5672345_3 Belongs to the ribulose-phosphate 3-epimerase family K01783 - 5.1.3.1 0.0000000000000000000000000000000000000000000000000000000000000000000000000000001307 279.0
DYD2_k127_5672345_4 Removes the N-terminal methionine from nascent proteins. The N-terminal methionine is often cleaved when the second residue in the primary sequence is small and uncharged (Met-Ala-, Cys, Gly, Pro, Ser, Thr, or Val) K01265 - 3.4.11.18 0.000000000000000000000000000000000000000000000000000000000000003335 229.0
DYD2_k127_5672345_5 Alpha/beta hydrolase family K22318 - - 0.0000000000000000000000000000000000000000000000000001556 201.0
DYD2_k127_5672345_6 Pyrophosphatase that catalyzes the hydrolysis of nucleoside triphosphates to their monophosphate derivatives, with a high preference for the non-canonical purine nucleotides XTP (xanthosine triphosphate), dITP (deoxyinosine triphosphate) and ITP. Seems to function as a house-cleaning enzyme that removes non-canonical purine nucleotides from the nucleotide pool, thus preventing their incorporation into DNA RNA and avoiding chromosomal lesions K02428 GO:0003674,GO:0003824,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006139,GO:0006725,GO:0006753,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0009056,GO:0009058,GO:0009141,GO:0009143,GO:0009987,GO:0016462,GO:0016787,GO:0016817,GO:0016818,GO:0018130,GO:0019438,GO:0019439,GO:0019637,GO:0034404,GO:0034641,GO:0034654,GO:0034655,GO:0044237,GO:0044238,GO:0044248,GO:0044249,GO:0044270,GO:0044271,GO:0044281,GO:0044283,GO:0044424,GO:0044464,GO:0046434,GO:0046483,GO:0046700,GO:0047429,GO:0055086,GO:0071704,GO:1901292,GO:1901360,GO:1901361,GO:1901362,GO:1901575,GO:1901576 3.6.1.66 0.0000000000000000000000000000000000000000005879 164.0
DYD2_k127_5672345_7 Cytochrome C assembly protein K02198 - - 0.000000000000000000000000000000000000000002257 179.0
DYD2_k127_5672345_8 TP53 regulating kinase K08851 GO:0000408,GO:0001558,GO:0002039,GO:0003674,GO:0003824,GO:0004672,GO:0004674,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005634,GO:0005654,GO:0005737,GO:0005829,GO:0006139,GO:0006464,GO:0006468,GO:0006725,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0009966,GO:0009967,GO:0009987,GO:0010646,GO:0010647,GO:0016070,GO:0016301,GO:0016310,GO:0016740,GO:0016772,GO:0016773,GO:0019538,GO:0023051,GO:0023056,GO:0030307,GO:0031974,GO:0031981,GO:0032006,GO:0032008,GO:0032991,GO:0034641,GO:0036211,GO:0040008,GO:0040014,GO:0040018,GO:0043170,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0043233,GO:0043412,GO:0044237,GO:0044238,GO:0044260,GO:0044267,GO:0044422,GO:0044424,GO:0044428,GO:0044444,GO:0044446,GO:0044464,GO:0045927,GO:0046483,GO:0048518,GO:0048522,GO:0048583,GO:0048584,GO:0048638,GO:0048639,GO:0050789,GO:0050793,GO:0050794,GO:0051094,GO:0051128,GO:0051239,GO:0051240,GO:0065007,GO:0070013,GO:0070525,GO:0071704,GO:0090304,GO:0140096,GO:1901360,GO:1901564,GO:1901796,GO:1902531,GO:1902533 2.7.11.1 0.000000000000000000000000000000000000000005355 164.0
DYD2_k127_5672345_9 PFAM HhH-GPD superfamily base excision DNA repair protein K03575 - - 0.0000000000000000000001557 104.0
DYD2_k127_5687701_0 Zn-dependent hydrolases of the beta-lactamase fold - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005097 401.0
DYD2_k127_5687701_1 Lysyl oxidase - - - 0.00000000007407 74.0
DYD2_k127_5717781_0 FAD-dependent pyridine nucleotide-disulphide oxidoreductase K00384 - 1.8.1.9 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001866 420.0
DYD2_k127_5717781_1 One of the primary rRNA binding proteins, it binds directly near the 3'-end of the 23S rRNA, where it nucleates assembly of the 50S subunit K02906 GO:0000027,GO:0003674,GO:0003676,GO:0003723,GO:0003735,GO:0005198,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0006412,GO:0006518,GO:0006807,GO:0006996,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0015934,GO:0016043,GO:0019538,GO:0022607,GO:0022613,GO:0022618,GO:0022625,GO:0022626,GO:0032991,GO:0034622,GO:0034641,GO:0034645,GO:0042254,GO:0042255,GO:0042273,GO:0043043,GO:0043170,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043603,GO:0043604,GO:0043933,GO:0044085,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:0065003,GO:0070925,GO:0071704,GO:0071826,GO:0071840,GO:0097159,GO:1901363,GO:1901564,GO:1901566,GO:1901576,GO:1990904 - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003452 378.0
DYD2_k127_5717781_10 Ribosomal L29 protein K02904 - - 0.00000000000006255 74.0
DYD2_k127_5717781_2 One of the primary rRNA binding proteins. Required for association of the 30S and 50S subunits to form the 70S ribosome, for tRNA binding and peptide bond formation. It has been suggested to have peptidyltransferase activity K02886 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000001057 257.0
DYD2_k127_5717781_3 ribosomal protein S3 K02982 GO:0000702,GO:0002181,GO:0003674,GO:0003676,GO:0003677,GO:0003684,GO:0003735,GO:0003824,GO:0005198,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0006139,GO:0006259,GO:0006281,GO:0006412,GO:0006518,GO:0006725,GO:0006807,GO:0006950,GO:0006974,GO:0008150,GO:0008152,GO:0008534,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0015935,GO:0016787,GO:0016798,GO:0016799,GO:0019104,GO:0019538,GO:0022626,GO:0022627,GO:0032991,GO:0033554,GO:0034641,GO:0034645,GO:0043043,GO:0043170,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:0046483,GO:0050896,GO:0051716,GO:0071704,GO:0090304,GO:0097159,GO:0140097,GO:1901360,GO:1901363,GO:1901564,GO:1901566,GO:1901576,GO:1990904 - 0.00000000000000000000000000000000000000000000000000000000000000000009491 240.0
DYD2_k127_5717781_4 Forms part of the polypeptide exit tunnel K02930 - - 0.00000000000000000000000000000000000000000000000000000000008032 219.0
DYD2_k127_5717781_5 Protein S19 forms a complex with S13 that binds strongly to the 16S ribosomal RNA K02965 - - 0.000000000000000000000000000000000001808 143.0
DYD2_k127_5717781_6 Translation initiation factor SUI1 K03113 GO:0001731,GO:0002181,GO:0002183,GO:0002188,GO:0002190,GO:0002192,GO:0003674,GO:0003676,GO:0003723,GO:0003729,GO:0003743,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006412,GO:0006413,GO:0006518,GO:0006807,GO:0008135,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0016043,GO:0019538,GO:0022607,GO:0022613,GO:0022618,GO:0032991,GO:0034622,GO:0034641,GO:0034645,GO:0043021,GO:0043022,GO:0043043,GO:0043170,GO:0043603,GO:0043604,GO:0043933,GO:0044085,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044424,GO:0044444,GO:0044464,GO:0044877,GO:0065003,GO:0070992,GO:0071704,GO:0071826,GO:0071840,GO:0097159,GO:0110017,GO:1901363,GO:1901564,GO:1901566,GO:1901576,GO:1990904 - 0.000000000000000000000000000000000472 135.0
DYD2_k127_5717781_7 Belongs to the peptidase S8 family - - - 0.000000000000000000000000000002557 134.0
DYD2_k127_5717781_8 The globular domain of the protein is located near the polypeptide exit tunnel on the outside of the subunit, while an extended beta-hairpin is found that lines the wall of the exit tunnel in the center of the 70S ribosome K02890 - - 0.00000000000000000000000000001247 130.0
DYD2_k127_5717781_9 Binds to 23S rRNA. One of the proteins that surrounds the polypeptide exit tunnel on the outside of the ribosome K02892 GO:0000027,GO:0003674,GO:0003676,GO:0003723,GO:0003735,GO:0005198,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0006412,GO:0006518,GO:0006807,GO:0006996,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0015934,GO:0016043,GO:0019538,GO:0022607,GO:0022613,GO:0022618,GO:0022625,GO:0022626,GO:0032991,GO:0034622,GO:0034641,GO:0034645,GO:0042254,GO:0042255,GO:0042273,GO:0043043,GO:0043170,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043603,GO:0043604,GO:0043933,GO:0044085,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:0065003,GO:0070925,GO:0071704,GO:0071826,GO:0071840,GO:0097159,GO:1901363,GO:1901564,GO:1901566,GO:1901576,GO:1990904 - 0.000000000000004405 83.0
DYD2_k127_5721692_0 amino acids such as valine, to avoid such errors it has two additional distinct tRNA(Ile)-dependent editing activities. One activity is designated as 'pretransfer' editing and involves the hydrolysis of activated Val-AMP. The other activity is designated 'posttransfer' editing and involves deacylation of mischarged Val-tRNA(Ile) K01870 - 6.1.1.5 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001793 370.0
DYD2_k127_5721692_1 Catalyzes the deamination of 5-methylthioadenosine and S-adenosyl-L-homocysteine into 5-methylthioinosine and S-inosyl-L- homocysteine, respectively. Is also able to deaminate adenosine K12960,K20810 GO:0003674,GO:0003824,GO:0016787,GO:0016810,GO:0016814,GO:0019239,GO:0050270 3.5.4.28,3.5.4.31,3.5.4.40 0.00000000000000000005683 93.0
DYD2_k127_5746728_0 Glutathione synthase Ribosomal protein S6 modification enzyme (Glutaminyl transferase) K01920 - 6.3.2.3 0.0000000000000000000000000000000000000000000000005681 193.0
DYD2_k127_5746728_1 Belongs to the peptidase S16 family K06870 - - 0.00000000000000000000000000000000000005089 166.0
DYD2_k127_5746728_2 Arsenical pump membrane protein - - - 0.000000000000000000000000000000002161 144.0
DYD2_k127_5746728_3 Sodium/hydrogen exchanger family K03455 - - 0.00000000000000000000000000003496 136.0
DYD2_k127_5746728_4 FR47-like protein - - - 0.00000000709 64.0
DYD2_k127_5746728_5 RimK-like ATPgrasp N-terminal domain - - - 0.0005459 51.0
DYD2_k127_5762504_0 Catalyzes two activities which are involved in the cyclic version of arginine biosynthesis the synthesis of N- acetylglutamate from glutamate and acetyl-CoA as the acetyl donor, and of ornithine by transacetylation between N(2)-acetylornithine and glutamate K00620 - 2.3.1.1,2.3.1.35 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002878 353.0
DYD2_k127_5762504_1 Catalyzes the NADPH-dependent reduction of N-acetyl-5- glutamyl phosphate to yield N-acetyl-L-glutamate 5-semialdehyde K00145 - 1.2.1.38 0.000000000000000000000000000000000000000000000000002387 195.0
DYD2_k127_5765871_0 COG1009 NADH ubiquinone oxidoreductase subunit 5 (chain L) Multisubunit Na H antiporter, MnhA subunit K00341 - 1.6.5.3 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004266 454.0
DYD2_k127_5765871_1 Proton-conducting membrane transporter K22168 - 1.5.98.3 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004539 377.0
DYD2_k127_5765871_10 - - - - 0.0000000009793 72.0
DYD2_k127_5765871_2 Proton-conducting membrane transporter K22169 - 1.5.98.3 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001358 358.0
DYD2_k127_5765871_3 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase - - - 0.0000000000000000000000000000000000000000000000000955 193.0
DYD2_k127_5765871_4 Specifically dimethylates two adjacent adenosines (A1518 and A1519) in the loop of a conserved hairpin near the 3'-end of 16S rRNA in the 30S particle. May play a critical role in biogenesis of 30S subunits K02528 GO:0000154,GO:0000179,GO:0001510,GO:0003674,GO:0003824,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006139,GO:0006364,GO:0006396,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0008168,GO:0008170,GO:0008173,GO:0008649,GO:0008757,GO:0009451,GO:0009987,GO:0010467,GO:0016070,GO:0016072,GO:0016433,GO:0016740,GO:0016741,GO:0022613,GO:0031167,GO:0032259,GO:0034470,GO:0034641,GO:0034660,GO:0042254,GO:0043170,GO:0043412,GO:0043414,GO:0044085,GO:0044237,GO:0044238,GO:0044260,GO:0044424,GO:0044464,GO:0046483,GO:0071704,GO:0071840,GO:0090304,GO:0140098,GO:0140102,GO:1901360 2.1.1.182 0.000000000000000000000000003397 122.0
DYD2_k127_5765871_5 PFAM nitrogen-fixing NifU domain protein - - - 0.000000000000000000001266 98.0
DYD2_k127_5765871_6 PFAM PKD domain containing protein - - - 0.000000000000000008487 98.0
DYD2_k127_5765871_7 phosphorelay signal transduction system K07714 - - 0.000000000000004128 85.0
DYD2_k127_5765871_8 PFAM Pentapeptide repeats (8 copies) - - - 0.000000000002089 81.0
DYD2_k127_5765871_9 NADH ubiquinone oxidoreductase subunit 11 or 4L (Chain K) K00340 - 1.6.5.3 0.0000000006455 60.0
DYD2_k127_5773638_0 benzoyl-CoA oxygenase K15512 - 1.14.13.208 0.000000000000000000000000000000000000000000000000000000005715 213.0
DYD2_k127_5773638_1 Cytidine and deoxycytidylate deaminase zinc-binding region K01489 - 3.5.4.5 0.0000000000000000000000000000000000000000000000003095 188.0
DYD2_k127_5773638_2 Catalyzes the isomerization between 2-isopropylmalate and 3-isopropylmalate, via the formation of 2-isopropylmaleate K01704,K20453 - 4.2.1.33,4.2.1.35,4.2.1.85 0.000000000000000000008151 95.0
DYD2_k127_5773638_3 COG1112 Superfamily I DNA and RNA helicases and helicase subunits K10742 - 3.6.4.12 0.00000000000001077 80.0
DYD2_k127_5778622_0 homogentisate 12-dioxygenase K00451 - 1.13.11.5 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001583 366.0
DYD2_k127_5778622_1 dioxygenase K00457,K16421 - 1.13.11.27,1.13.11.46 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007356 322.0
DYD2_k127_5778622_2 COG1335 Amidases related to nicotinamidase - - - 0.00000000000000000000000000000000000000000003352 168.0
DYD2_k127_5778622_3 Pyruvate flavodoxin ferredoxin oxidoreductase domain protein K00174 - 1.2.7.11,1.2.7.3 0.0000000000000000000000000006956 118.0
DYD2_k127_5778622_4 Toxic component of a toxin-antitoxin (TA) module. An RNase - - - 0.000000000000000007843 91.0
DYD2_k127_5778622_5 Possibly the antitoxin component of a - - - 0.0003691 48.0
DYD2_k127_5791166_0 - - - - 0.00000002929 58.0
DYD2_k127_5791166_1 Archaeal Type IV pilin, N-terminal - - - 0.0008753 49.0
DYD2_k127_5812586_0 TCP-1/cpn60 chaperonin family K22447 GO:0003674,GO:0005488,GO:0005515,GO:0006457,GO:0006458,GO:0008150,GO:0009987,GO:0044183,GO:0051082,GO:0061077 - 0.000000000000000000000000000000000000000000000000000000000000002242 221.0
DYD2_k127_5812586_1 ABC transporter K01990 - - 0.000000000000000000000000000000000000000000001444 176.0
DYD2_k127_5812586_2 of the RND superfamily - - - 0.0000000000005342 83.0
DYD2_k127_5832419_0 Catalyzes the synthesis of GMP from XMP K01951 - 6.3.5.2 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001935 390.0
DYD2_k127_5832419_1 Catalyzes the decarboxylation of L-tyrosine to produce tyramine for methanofuran biosynthesis. Can also catalyze the decarboxylation of L-aspartate to produce beta-alanine for coenzyme A (CoA) biosynthesis K18933 - 4.1.1.11,4.1.1.25 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006199 310.0
DYD2_k127_5832419_2 Pfam:DUF137 K09722 - 6.3.2.36 0.00000000000000000000000000000000000000000000000000000000000000005239 234.0
DYD2_k127_5832419_3 Quinolinate phosphoribosyl transferase, C-terminal domain K00767 - 2.4.2.19 0.000000000000000000000000000000000000000000000000000006208 200.0
DYD2_k127_5832419_4 Flavin reductase like domain - - - 0.000000000000000000000000000000000000000000004357 171.0
DYD2_k127_5832419_5 The glycine cleavage system catalyzes the degradation of glycine. The H protein shuttles the methylamine group of glycine from the P protein to the T protein K02437 - - 0.000000000000000000000000000000000000000002808 160.0
DYD2_k127_5855779_0 Catalyzes the formation of phosphoribosylamine from phosphoribosylpyrophosphate (PRPP) and glutamine K00764 - 2.4.2.14 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006953 503.0
DYD2_k127_5855779_1 Phosphoribosylglycinamide synthetase, C domain K01945 - 6.3.4.13 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009242 413.0
DYD2_k127_5855779_10 AMP binding - - - 0.000000000003681 76.0
DYD2_k127_5855779_11 Repeats in polycystic kidney disease 1 (PKD1) and other proteins - - - 0.00000003711 64.0
DYD2_k127_5855779_12 Putative adhesin - - - 0.000007003 58.0
DYD2_k127_5855779_13 TM2 domain - - - 0.00008238 49.0
DYD2_k127_5855779_14 guanyl-nucleotide exchange factor activity K20276 - - 0.000227 53.0
DYD2_k127_5855779_2 SAICAR synthetase K01923 - 6.3.2.6 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001116 372.0
DYD2_k127_5855779_3 Conserved hypothetical ATP binding protein K06883 - - 0.0000000000000000000000000000000000000000000000000000000000001586 226.0
DYD2_k127_5855779_4 Catalyzes the transfer of a ribosyl phosphate group from 5-phosphoribose 1-diphosphate to orotate, leading to the formation of orotidine monophosphate (OMP) K00762 - 2.4.2.10 0.0000000000000000000000000000000000000000606 160.0
DYD2_k127_5855779_5 Redoxin K03564 - 1.11.1.15 0.0000000000000000000000000000000000000003019 154.0
DYD2_k127_5855779_6 nucleotide-utilizing enzyme related to molybdopterin-biosynthesis enzyme MoeA - - - 0.0000000000000000000000000006005 123.0
DYD2_k127_5855779_7 PFAM 4Fe-4S ferredoxin, iron-sulfur binding - - - 0.000000000000000000000000000843 122.0
DYD2_k127_5855779_8 Ferredoxin - - - 0.0000000000000000000001637 105.0
DYD2_k127_5855779_9 Thioesterase superfamily K07107 - - 0.0000000000000000000003326 106.0
DYD2_k127_5862834_0 Involved in the glycolate utilization. Catalyzes the condensation and subsequent hydrolysis of acetyl-coenzyme A (acetyl-CoA) and glyoxylate to form malate and CoA K01638 GO:0003674,GO:0003824,GO:0004474,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005975,GO:0006081,GO:0006082,GO:0006097,GO:0008150,GO:0008152,GO:0009987,GO:0016740,GO:0016746,GO:0019752,GO:0032787,GO:0043436,GO:0044237,GO:0044238,GO:0044262,GO:0044281,GO:0044424,GO:0044464,GO:0046487,GO:0046912,GO:0071704 2.3.3.9 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003733 427.0
DYD2_k127_5862834_1 Major role in the synthesis of nucleoside triphosphates other than ATP. The ATP gamma phosphate is transferred to the NDP beta phosphate via a ping-pong mechanism, using a phosphorylated active-site intermediate K00940 GO:0003674,GO:0003824,GO:0004550,GO:0005575,GO:0005622,GO:0005623,GO:0006139,GO:0006163,GO:0006165,GO:0006220,GO:0006725,GO:0006753,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0009117,GO:0009132,GO:0009987,GO:0016301,GO:0016310,GO:0016740,GO:0016772,GO:0016776,GO:0019205,GO:0019637,GO:0034641,GO:0044237,GO:0044238,GO:0044281,GO:0044464,GO:0046483,GO:0046939,GO:0055086,GO:0071704,GO:0072521,GO:0072527,GO:1901360,GO:1901564 2.7.4.6 0.000000000000000000000000000000000000000000000003074 180.0
DYD2_k127_5862834_2 Flavodoxin-like fold - - - 0.0000000000000000000000000000001485 136.0
DYD2_k127_5862834_3 Acylphosphatase K01512 - 3.6.1.7 0.000000000000000000000000002549 113.0
DYD2_k127_5878740_0 PFAM carboxyl transferase K01966 - 2.1.3.15,6.4.1.3 1.449e-205 655.0
DYD2_k127_5878740_1 Copper binding proteins, plastocyanin/azurin family - - - 0.00000005125 57.0
DYD2_k127_5878740_2 ABC transporter K01990,K21397 - - 0.0008132 49.0
DYD2_k127_5934889_0 TIGRFAM phage SPO1 DNA polymerase-related protein K21929 GO:0003674,GO:0003824,GO:0004844,GO:0005488,GO:0006139,GO:0006259,GO:0006281,GO:0006725,GO:0006807,GO:0006950,GO:0006974,GO:0008150,GO:0008152,GO:0009987,GO:0016787,GO:0016798,GO:0016799,GO:0019104,GO:0033554,GO:0034641,GO:0043170,GO:0044237,GO:0044238,GO:0044260,GO:0046483,GO:0048037,GO:0050896,GO:0051536,GO:0051539,GO:0051540,GO:0051716,GO:0071704,GO:0090304,GO:0097506,GO:0140097,GO:1901360 3.2.2.27 0.000000000000000000000000000000000000000003053 164.0
DYD2_k127_5934889_1 PFAM phospholipid glycerol acyltransferase - - - 0.0000000000000000000000000000000000000002576 160.0
DYD2_k127_5934889_2 with the alpha beta hydrolase fold - - - 0.0000000000000000000000001278 115.0
DYD2_k127_5934889_3 PFAM PKD domain containing protein - - - 0.00000000000000000318 100.0
DYD2_k127_5934889_4 alginic acid biosynthetic process - - - 0.0000000002965 73.0
DYD2_k127_5943218_0 Cell division protein 48 (CDC48), domain 2 K13525 - - 0.000000000000000000000000000000000001422 154.0
DYD2_k127_5952712_0 Catalyzes two steps in the biosynthesis of coenzyme A. In the first step cysteine is conjugated to 4'-phosphopantothenate to form 4-phosphopantothenoylcysteine, in the latter compound is decarboxylated to form 4'-phosphopantotheine K13038 - 4.1.1.36,6.3.2.5 0.000000000000000000000000000000000000000000000000000000000000000000001257 244.0
DYD2_k127_5952712_1 DNA ligase that seals nicks in double-stranded DNA during DNA replication, DNA recombination and DNA repair K10747 - 6.5.1.1,6.5.1.6,6.5.1.7 0.00000000000000000000000000000000000000000000000000000000001822 218.0
DYD2_k127_595826_0 tRNA synthetases class II (D, K and N) K01893 - 6.1.1.22 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002738 379.0
DYD2_k127_595826_1 PFAM aspartate ornithine carbamoyltransferase carbamoyl-P binding domain K00609 GO:0003674,GO:0003824,GO:0004070,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006139,GO:0006220,GO:0006221,GO:0006725,GO:0006753,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009117,GO:0009165,GO:0009218,GO:0009220,GO:0009259,GO:0009260,GO:0009987,GO:0016740,GO:0016741,GO:0016743,GO:0018130,GO:0019438,GO:0019637,GO:0019693,GO:0034641,GO:0034654,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0044424,GO:0044464,GO:0046390,GO:0046483,GO:0055086,GO:0071704,GO:0072527,GO:0072528,GO:0090407,GO:1901135,GO:1901137,GO:1901293,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576 2.1.3.2 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000002296 296.0
DYD2_k127_595826_2 O-methyltransferase - - - 0.0000000000000000000000000000000000009523 147.0
DYD2_k127_595826_3 beta-lactamase domain protein - - - 0.0000000000000000000000000008244 121.0
DYD2_k127_595826_4 Involved in allosteric regulation of aspartate carbamoyltransferase K00610 - - 0.00000000000000000008022 93.0
DYD2_k127_5959835_0 archaeal coiled-coil protein - - - 0.00000000000000000000000000000000000005461 155.0
DYD2_k127_5966075_0 TIGRFAM 2-oxoacid acceptor oxidoreductase, alpha subunit K00174 - 1.2.7.11,1.2.7.3 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000786 392.0
DYD2_k127_5966075_1 TIGRFAM pyruvate ferredoxin flavodoxin oxidoreductase, beta subunit K00175 - 1.2.7.11,1.2.7.3 0.0000000000000000000000000000000000000000000000000000000000000006306 224.0
DYD2_k127_5966075_2 amino acids such as threonine, to avoid such errors, it has a posttransfer editing activity that hydrolyzes mischarged Thr-tRNA(Val) in a tRNA-dependent manner K01873 GO:0003674,GO:0003824,GO:0004812,GO:0004832,GO:0006082,GO:0006139,GO:0006399,GO:0006412,GO:0006418,GO:0006438,GO:0006518,GO:0006520,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0016070,GO:0016874,GO:0016875,GO:0019538,GO:0019752,GO:0034641,GO:0034645,GO:0034660,GO:0043038,GO:0043039,GO:0043043,GO:0043170,GO:0043436,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044281,GO:0046483,GO:0071704,GO:0090304,GO:0140098,GO:0140101,GO:1901360,GO:1901564,GO:1901566,GO:1901576 6.1.1.9 0.000000000000009475 87.0
DYD2_k127_5969738_0 DegT/DnrJ/EryC1/StrS aminotransferase family K10907 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006041 447.0
DYD2_k127_5969738_1 Involved in targeting and insertion of nascent membrane proteins into the cytoplasmic membrane. Acts as a receptor for the complex formed by the signal recognition particle (SRP) and the ribosome-nascent chain (RNC) K03110 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001679 329.0
DYD2_k127_5969738_2 TIGRFAM geranylgeranyl reductase family - - - 0.000000000000000000000000000000000000000000000000000000000000000002679 243.0
DYD2_k127_5969738_3 Domain of unknown function (DUF1731) K07071 - - 0.00000000000000000000000000000000000000000000000001457 193.0
DYD2_k127_5969738_4 pre-rRNA processing protein involved in ribosome biogenesis K09140 - - 0.0000000000000000000000000000000000000000004288 164.0
DYD2_k127_5969738_5 The natural substrate for this enzyme may be peptidyl- tRNAs which drop off the ribosome during protein synthesis K04794 - 3.1.1.29 0.000000000000000000000000000000001395 136.0
DYD2_k127_5969738_6 Pyridoxamine 5'-phosphate oxidase K07005 - - 0.00000000000000000001176 94.0
DYD2_k127_5969738_7 PFAM regulatory protein, ArsR - - - 0.00000000000003149 83.0
DYD2_k127_5969738_8 PFAM Peptidase C1A, papain C-terminal - - - 0.00000002103 66.0
DYD2_k127_5969738_9 Thiamine-phosphate synthase K22206 - - 0.0005303 44.0
DYD2_k127_5973929_0 TIGRFAM Small GTP-binding protein K06944 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003775 367.0
DYD2_k127_5976393_0 FeS assembly ATPase SufC K09013 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001039 334.0
DYD2_k127_5976393_1 ABC-type transport system involved in Fe-S cluster assembly, permease component K07033,K09015 - - 0.00000000000000000000000000000000000000000000000000000000000001448 231.0
DYD2_k127_5993453_0 Belongs to the lyase 1 family. Adenylosuccinate lyase subfamily K01756 GO:0003674,GO:0003824,GO:0004018,GO:0006139,GO:0006163,GO:0006164,GO:0006167,GO:0006725,GO:0006753,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009117,GO:0009123,GO:0009124,GO:0009126,GO:0009127,GO:0009150,GO:0009152,GO:0009156,GO:0009161,GO:0009165,GO:0009167,GO:0009168,GO:0009259,GO:0009260,GO:0009987,GO:0016829,GO:0016840,GO:0016842,GO:0017144,GO:0018130,GO:0019438,GO:0019637,GO:0019693,GO:0034641,GO:0034654,GO:0044208,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0046033,GO:0046390,GO:0046483,GO:0055086,GO:0070626,GO:0071704,GO:0072521,GO:0072522,GO:0090407,GO:1901135,GO:1901137,GO:1901293,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576 4.3.2.2 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000266 414.0
DYD2_k127_6014594_0 TIGRFAM acetyl coenzyme A synthetase (ADP forming), alpha domain K01905,K22224 - 6.2.1.13 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004167 545.0
DYD2_k127_6014594_1 ERAP1-like C-terminal domain K01256,K08776 - 3.4.11.2 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003398 515.0
DYD2_k127_6014594_2 PFAM Sodium sulphate symporter K14445 - - 0.0000000000000000000000000000000000000000000000000000000002844 219.0
DYD2_k127_6014594_3 Destroys radicals which are normally produced within the cells and which are toxic to biological systems K04564 - 1.15.1.1 0.00000000000000000000000000000000000000000000000000000114 201.0
DYD2_k127_6014594_4 Sodium/calcium exchanger protein K07301 - - 0.0000000000000000000000000000000001311 147.0
DYD2_k127_6014594_5 PFAM 4Fe-4S ferredoxin, iron-sulfur binding domain protein - - - 0.000000000000000000000000000002501 124.0
DYD2_k127_6014594_6 Domain in cystathionine beta-synthase and other proteins. - - - 0.0000000000000000000000000006745 121.0
DYD2_k127_6017369_0 FAD dependent oxidoreductase K00313 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007795 344.0
DYD2_k127_6017369_1 Electron transfer flavoprotein-ubiquinone oxidoreductase, 4Fe-4S - - - 0.000000000000000000000000597 110.0
DYD2_k127_6019678_0 abc-type fe3 -hydroxamate transport system, periplasmic component K02016 - - 0.0000000000000000000000000000000000000000057 164.0
DYD2_k127_6019678_1 Endonuclease that specifically degrades the RNA of RNA- DNA hybrids K03470 - 3.1.26.4 0.0000000000000000000000000000000001031 145.0
DYD2_k127_6019678_2 SdrD B-like domain - - - 0.000003272 60.0
DYD2_k127_6034946_0 PFAM amidohydrolase - - - 0.0000000000000000000000000000000000000000004677 177.0
DYD2_k127_6034946_1 exosome subunit K07581 - - 0.0000000000000004638 84.0
DYD2_k127_6080661_0 Methylmalonyl-CoA mutase K01847,K01848 - 5.4.99.2 1.564e-231 731.0
DYD2_k127_6080661_1 Belongs to the archaeal rpoM eukaryotic RPA12 RPB9 RPC11 RNA polymerase family K03057 GO:0000428,GO:0003674,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0006355,GO:0008150,GO:0008270,GO:0009889,GO:0010468,GO:0010556,GO:0019219,GO:0019222,GO:0030880,GO:0031323,GO:0031326,GO:0032991,GO:0043167,GO:0043169,GO:0044424,GO:0044464,GO:0046872,GO:0046914,GO:0050789,GO:0050794,GO:0051171,GO:0051252,GO:0060255,GO:0061695,GO:0065007,GO:0080090,GO:1902494,GO:1903506,GO:1990234,GO:2000112,GO:2001141 - 0.000000000000000000000008842 104.0
DYD2_k127_6115180_0 PFAM carboxyl transferase K01966 - 2.1.3.15,6.4.1.3 3.113e-225 708.0
DYD2_k127_6115180_1 ABC transporter K06158 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000003893 317.0
DYD2_k127_6115180_10 Required for the export of heme to the periplasm for the biogenesis of c-type cytochromes K02194 - - 0.0000000000003222 79.0
DYD2_k127_6115180_11 cheY-homologous receiver domain - - - 0.0000000000004681 79.0
DYD2_k127_6115180_12 DNA binding protein - - - 0.0000003197 60.0
DYD2_k127_6115180_13 PFAM blue (type 1) copper domain protein K00368 - 1.7.2.1 0.000154 49.0
DYD2_k127_6115180_14 hydroperoxide reductase activity - - - 0.0002003 45.0
DYD2_k127_6115180_15 transcriptional regulators - - - 0.0002768 48.0
DYD2_k127_6115180_2 Histidine kinase K03407 - 2.7.13.3 0.000000000000000000000000000000000000000000000000000000000000000000000005654 277.0
DYD2_k127_6115180_3 Helix-turn-helix XRE-family like proteins K07731 - - 0.0000000000000000000000000000000000000000000000000000000000000000002137 236.0
DYD2_k127_6115180_4 Cupin 2, conserved barrel - - - 0.00000000000000000000000000000000000000000000000000000000005673 208.0
DYD2_k127_6115180_5 PFAM ABC transporter K01990 - - 0.00000000000000000000000000000001204 134.0
DYD2_k127_6115180_6 Cytochrome c assembly protein K02195 - - 0.00000000000000000000001077 110.0
DYD2_k127_6115180_7 GDP-mannose mannosyl hydrolase activity K01515,K03574 - 3.6.1.13,3.6.1.55 0.000000000000000000006397 98.0
DYD2_k127_6115180_8 Metal dependent phosphohydrolases with conserved 'HD' motif. - - - 0.00000000000000002101 88.0
DYD2_k127_6115180_9 COG0589 Universal stress protein UspA and related nucleotide-binding proteins - - - 0.0000000000002254 79.0
DYD2_k127_6152008_0 Catalyzes the formation of S-adenosylmethionine (AdoMet) from methionine and ATP. The overall synthetic reaction is composed of two sequential steps, AdoMet formation and the subsequent tripolyphosphate hydrolysis which occurs prior to release of AdoMet from the enzyme K00789 - 2.5.1.6 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004618 443.0
DYD2_k127_6152008_1 Catalyzes the phosphorylation of (R)-mevalonate (MVA) to (R)-mevalonate 5-phosphate (MVAP). Functions in the mevalonate (MVA) pathway leading to isopentenyl diphosphate (IPP), a key precursor for the biosynthesis of isoprenoid compounds such as archaeal membrane lipids K00869 GO:0003674,GO:0003824,GO:0004496,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006084,GO:0006139,GO:0006163,GO:0006629,GO:0006637,GO:0006644,GO:0006720,GO:0006725,GO:0006732,GO:0006753,GO:0006790,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0008202,GO:0008299,GO:0008610,GO:0008654,GO:0009058,GO:0009117,GO:0009150,GO:0009240,GO:0009259,GO:0009987,GO:0016125,GO:0016301,GO:0016310,GO:0016740,GO:0016772,GO:0016773,GO:0019287,GO:0019637,GO:0019693,GO:0033865,GO:0033875,GO:0034032,GO:0034641,GO:0035383,GO:0043603,GO:0044237,GO:0044238,GO:0044249,GO:0044255,GO:0044281,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0046490,GO:0051186,GO:0055086,GO:0071704,GO:0072521,GO:0090407,GO:1901135,GO:1901360,GO:1901564,GO:1901576,GO:1901615 2.7.1.36 0.000000000000000000000000000000000000000000000000000000002166 224.0
DYD2_k127_6152008_2 Part of the twin-arginine translocation (Tat) system that transports large folded proteins containing a characteristic twin-arginine motif in their signal peptide across membranes K03118 - - 0.000000000000000000000005832 113.0
DYD2_k127_6152008_3 Promotes the exchange of GDP for GTP in EF-1-alpha GDP, thus allowing the regeneration of EF-1-alpha GTP that could then be used to form the ternary complex EF-1-alpha GTP AAtRNA K03232 - - 0.000000000002988 70.0
DYD2_k127_6152008_4 Part of the twin-arginine translocation (Tat) system that transports large folded proteins containing a characteristic twin-arginine motif in their signal peptide across membranes. TatA could form the protein-conducting channel of the Tat system K03116 - - 0.00006204 50.0
DYD2_k127_6152580_0 PFAM PP-loop domain protein - - - 0.0000000000000000000000000000000000000000000000000000000000000000002153 241.0
DYD2_k127_6152580_1 PFAM TrkA-N domain K03499 - - 0.0000000000000000000000000000000000000000000000000000000000003545 228.0
DYD2_k127_6152580_2 Low-affinity potassium transport system. Interacts with trk system potassium uptake protein TrkA K03498,K03499 GO:0003674,GO:0005215,GO:0005216,GO:0005261,GO:0005267,GO:0005488,GO:0005515,GO:0005575,GO:0005623,GO:0005886,GO:0005887,GO:0006810,GO:0006811,GO:0006812,GO:0006813,GO:0008150,GO:0008324,GO:0009987,GO:0015075,GO:0015077,GO:0015079,GO:0015267,GO:0015318,GO:0015672,GO:0016020,GO:0016021,GO:0022803,GO:0022838,GO:0022857,GO:0022890,GO:0030001,GO:0030955,GO:0031224,GO:0031226,GO:0031420,GO:0034220,GO:0042802,GO:0042803,GO:0043167,GO:0043169,GO:0044425,GO:0044459,GO:0044464,GO:0046872,GO:0046873,GO:0046983,GO:0051179,GO:0051234,GO:0055085,GO:0071804,GO:0071805,GO:0071944,GO:0098655,GO:0098660,GO:0098662 - 0.00000000000000000000000000000000006003 149.0
DYD2_k127_6174662_0 damaged site, the DNA wraps around one UvrB monomer. DNA wrap is dependent on ATP binding by UvrB and probably causes local melting of the DNA helix, facilitating insertion of UvrB beta-hairpin between the DNA strands. Then UvrB probes one DNA strand for the presence of a lesion. If a lesion is found the UvrA subunits dissociate and the UvrB-DNA preincision complex is formed. This complex is subsequently bound by UvrC and the second UvrB is released. If no lesion is found, the DNA wraps around the other UvrB subunit that will check the other stand for damage K03702 - - 4.827e-238 763.0
DYD2_k127_6174662_1 glycosyl transferase family 2 K00721 - 2.4.1.83 0.0000000000000000000000000000000000000000000000000000000000000000002814 253.0
DYD2_k127_6213116_0 PFAM Glucose Sorbosone dehydrogenase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008741 315.0
DYD2_k127_6213116_1 Reversibly catalyzes the transfer of the carbamoyl group from carbamoyl phosphate (CP) to the N(epsilon) atom of ornithine (ORN) to produce L-citrulline K00611 GO:0000050,GO:0003674,GO:0003824,GO:0004585,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006082,GO:0006520,GO:0006525,GO:0006526,GO:0006591,GO:0006807,GO:0008150,GO:0008152,GO:0008652,GO:0009058,GO:0009064,GO:0009084,GO:0009987,GO:0016053,GO:0016740,GO:0016741,GO:0016743,GO:0019627,GO:0019752,GO:0034641,GO:0042450,GO:0043436,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0044283,GO:0044424,GO:0044464,GO:0046394,GO:0071704,GO:0071941,GO:1901564,GO:1901566,GO:1901576,GO:1901605,GO:1901607 2.1.3.3 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000001012 296.0
DYD2_k127_6213116_10 - - - - 0.000016 57.0
DYD2_k127_6213116_2 Enoyl-(Acyl carrier protein) reductase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000001714 274.0
DYD2_k127_6213116_3 His Kinase A (phosphoacceptor) domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000132 255.0
DYD2_k127_6213116_4 Argininosuccinate lyase C-terminal K01755 - 4.3.2.1 0.000000000000000000000000000000000000000000000000000000000004088 226.0
DYD2_k127_6213116_5 catechol 2,3-dioxygenase activity K07104 - 1.13.11.2 0.000000000000000000000000000000000000000000000000000000622 198.0
DYD2_k127_6213116_6 COG0589 Universal stress protein UspA and related nucleotide-binding proteins - - - 0.000000000000000000000000001726 124.0
DYD2_k127_6213116_7 PFAM Uncharacterised ACR, YagE family COG1723 - - - 0.000000000000000007775 96.0
DYD2_k127_6213116_8 Cytochrome C oxidase subunit II, transmembrane domain - - - 0.000000002376 70.0
DYD2_k127_6213116_9 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase - - - 0.000006298 53.0
DYD2_k127_6239327_0 von Willebrand factor, type A - GO:0005575,GO:0005623,GO:0005886,GO:0016020,GO:0044464,GO:0071944 - 0.000000002271 69.0
DYD2_k127_6311908_0 Belongs to the UPF0219 family K01641 - 2.3.3.10 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002091 392.0
DYD2_k127_6311908_1 Belongs to the class-II aminoacyl-tRNA synthetase family K01892 - 6.1.1.21 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001723 337.0
DYD2_k127_6311908_2 Cytochrome c oxidase is the component of the respiratory chain that catalyzes the reduction of oxygen to water. Subunits 1- 3 form the functional core of the enzyme complex. CO I is the catalytic subunit of the enzyme. Electrons originating in cytochrome c are transferred via the copper A center of subunit 2 and heme A of subunit 1 to the bimetallic center formed by heme A3 and copper B K02274 - 1.9.3.1 0.000000000000000000000000000000000000000000000000000000000000000007676 232.0
DYD2_k127_6319219_0 ATP-dependent agmatine transferase that catalyzes the formation of 2-agmatinylcytidine (agm2C) at the wobble position (C34) of tRNA(Ile2), converting the codon specificity from AUG to AUA K06932 GO:0002097,GO:0002101,GO:0003674,GO:0003824,GO:0006139,GO:0006396,GO:0006399,GO:0006400,GO:0006725,GO:0006807,GO:0008033,GO:0008150,GO:0008152,GO:0009451,GO:0009987,GO:0010467,GO:0016070,GO:0016874,GO:0016879,GO:0034470,GO:0034641,GO:0034660,GO:0043170,GO:0043412,GO:0044237,GO:0044238,GO:0046483,GO:0071704,GO:0090304,GO:1901360 6.3.4.22 0.000000000000000000000000000000000000000000000000000000000000000000000000000006081 282.0
DYD2_k127_6319219_1 Catalyzes the ATP-dependent amidation of deamido-NAD to form NAD. Uses ammonia as a nitrogen source K01916 GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006139,GO:0006725,GO:0006732,GO:0006733,GO:0006753,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009108,GO:0009117,GO:0009165,GO:0009435,GO:0009987,GO:0018130,GO:0019359,GO:0019362,GO:0019363,GO:0019438,GO:0019637,GO:0019674,GO:0034641,GO:0034654,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0044424,GO:0044464,GO:0046483,GO:0046496,GO:0051186,GO:0051188,GO:0055086,GO:0071704,GO:0072524,GO:0072525,GO:0090407,GO:1901293,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576 6.3.1.5 0.00000000000000000000000000000000000000000000000000000000003981 226.0
DYD2_k127_6319219_2 Catalyzes the synthesis of 5,6-dihydrouridine (D), a modified base found in the D-loop of most tRNAs, via the reduction of the C5-C6 double bond in target uridines K05540 - - 0.0000000000000000000000000000000000000000000000005138 189.0
DYD2_k127_6319219_3 Carbon-nitrogen hydrolase K18540 - 3.5.1.100 0.0000000000000000000000000000000000000000003725 177.0
DYD2_k127_6326919_0 DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates K03041 GO:0000428,GO:0005575,GO:0005622,GO:0005623,GO:0030880,GO:0032991,GO:0044424,GO:0044464,GO:0061695,GO:1902494,GO:1990234 2.7.7.6 1.052e-266 833.0
DYD2_k127_6349572_0 DEAD DEAH box helicase domain protein K10896 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001805 544.0
DYD2_k127_6349572_2 Uncharacterised protein family (UPF0147) K09721 - - 0.00000000000000000000002744 102.0
DYD2_k127_6368182_0 SpoU rRNA Methylase family - - - 0.00000000000000000000000000001502 127.0
DYD2_k127_6368182_1 Membrane K20276 - - 0.0000000000000000000000002088 120.0
DYD2_k127_6368182_2 - - - - 0.0009819 49.0
DYD2_k127_6396976_0 Relaxes both positive and negative superturns and exhibits a strong decatenase activity K03166 GO:0003674,GO:0003676,GO:0003677,GO:0003824,GO:0003916,GO:0003918,GO:0004518,GO:0004519,GO:0004520,GO:0004536,GO:0005488,GO:0006139,GO:0006259,GO:0006725,GO:0006807,GO:0008094,GO:0008150,GO:0008152,GO:0009987,GO:0016462,GO:0016787,GO:0016788,GO:0016817,GO:0016818,GO:0016853,GO:0016887,GO:0016889,GO:0016894,GO:0017111,GO:0034641,GO:0042623,GO:0043170,GO:0044237,GO:0044238,GO:0044260,GO:0046483,GO:0061505,GO:0071704,GO:0090304,GO:0090305,GO:0097159,GO:0140097,GO:1901360,GO:1901363 5.99.1.3 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007835 508.0
DYD2_k127_6396976_1 Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family K00823 - 2.6.1.19 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004328 344.0
DYD2_k127_6396976_2 Relaxes both positive and negative superturns and exhibits a strong decatenase activity K03167 GO:0003674,GO:0003735,GO:0005198,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0006412,GO:0006518,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0015935,GO:0019538,GO:0022613,GO:0032991,GO:0034641,GO:0034645,GO:0042254,GO:0043043,GO:0043170,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043603,GO:0043604,GO:0044085,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044446,GO:0044464,GO:0071704,GO:0071840,GO:1901564,GO:1901566,GO:1901576,GO:1990904 5.99.1.3 0.00000000000000000000000000000000000000000252 167.0
DYD2_k127_6396976_3 PD-(D/E)XK nuclease superfamily - - - 0.00000000000000000000004374 114.0
DYD2_k127_6396976_4 protein conserved in archaea - - - 0.000321 52.0
DYD2_k127_6458443_0 Glycosyl transferase family 2 - - - 0.00000000000000000000000000000006022 145.0
DYD2_k127_6458443_1 Endonuclease Exonuclease Phosphatase - - - 0.00000000002845 76.0
DYD2_k127_6458443_2 Domain of unknown function (DUF1929) - - - 0.00001894 57.0
DYD2_k127_647557_0 Belongs to the glycosyl hydrolase 5 (cellulase A) family K01179,K19668 GO:0005575,GO:0005576 3.2.1.4,3.2.1.91 0.000001233 61.0
DYD2_k127_6485808_0 PFAM Glycosyl transferase family 2 - - - 0.000000000000000000000000000000000000000000000000000000001698 206.0
DYD2_k127_6485808_1 Methyltransferase domain - - - 0.0000000000000000000000003578 113.0
DYD2_k127_6485808_2 Glycosyltransferase like family - - - 0.0000000000000000000008135 107.0
DYD2_k127_6485808_3 Polysaccharide biosynthesis C-terminal domain - - - 0.000000000000000000003051 108.0
DYD2_k127_6485808_4 Glycosyltransferase like family - - - 0.00000000000000000003552 100.0
DYD2_k127_6485808_5 transferase activity, transferring glycosyl groups - - - 0.0000000000000005422 89.0
DYD2_k127_6485808_6 PFAM Glycosyl transferase family 2 - - - 0.000008741 49.0
DYD2_k127_6485808_7 Belongs to the CDP-alcohol phosphatidyltransferase class-I family - - - 0.0008437 50.0
DYD2_k127_6485808_8 CarboxypepD_reg-like domain - - - 0.0009251 51.0
DYD2_k127_6485859_0 PFAM Methylmalonyl-CoA mutase K01848 - 5.4.99.2 0.0000000000000000000000000000000008141 134.0
DYD2_k127_6487133_0 Acyl-CoA dehydrogenase, C-terminal domain K18244 - - 0.0000000000000000000000000000000000000000000000000000000002183 211.0
DYD2_k127_6487133_2 ABC transporter K15738 - - 0.00000000000000004674 86.0
DYD2_k127_6487133_3 nuclease activity - - - 0.000000000008341 68.0
DYD2_k127_6487133_4 Protein of unknown function (DUF2683) - - - 0.000000003703 63.0
DYD2_k127_6503941_0 glutamine synthetase K01915 - 6.3.1.2 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008826 494.0
DYD2_k127_6503941_1 helix_turn_helix ASNC type - - - 0.000000000000000002981 92.0
DYD2_k127_6503941_2 Carboxypeptidase regulatory-like domain - - - 0.0001312 53.0
DYD2_k127_6514648_0 A type II topoisomerase that negatively supercoils closed circular double-stranded (ds) DNA in an ATP-dependent manner to modulate DNA topology and maintain chromosomes in an underwound state. Negative supercoiling favors strand separation, and DNA replication, transcription, recombination and repair, all of which involve strand separation. Also able to catalyze the interconversion of other topological isomers of dsDNA rings, including catenanes and knotted rings. Type II topoisomerases break and join 2 DNA strands simultaneously in an ATP-dependent manner K02469 - 5.99.1.3 6.523e-247 785.0
DYD2_k127_6531698_0 ATPase involved in replication control, Cdc46 Mcm family K10726 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007739 623.0
DYD2_k127_6531698_1 Protein of unknown function (DUF424) K09148 - - 0.000000000000000002641 88.0
DYD2_k127_6531698_2 LVIVD repeat - - - 0.0003173 53.0
DYD2_k127_6546283_0 Cysteine desulfurase K11717 - 2.8.1.7,4.4.1.16 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001512 549.0
DYD2_k127_6546283_1 TIGRFAM SUF system FeS K04488 - - 0.000000000000000000000000000000000000000000000000001336 187.0
DYD2_k127_6546283_2 FeS assembly SUF system protein SufT - - - 0.0000000002456 66.0
DYD2_k127_6550516_0 Protein of unknown function, DUF255 K06888 - - 3.121e-197 636.0
DYD2_k127_6550516_1 ThiF family - - - 0.000000000000000000000000000000000000000000000000000000000000000001278 244.0
DYD2_k127_6550516_2 PFAM Glyoxalase bleomycin resistance protein dioxygenase K07104 - 1.13.11.2 0.000000000000000000000002375 103.0
DYD2_k127_6558032_0 Diguanylate cyclase K13924 - 2.1.1.80,3.1.1.61 0.000000000000000000000000000000000000000000000000000000000000000000000000000000001899 302.0
DYD2_k127_6558032_1 COGs COG0745 Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain - - - 0.0000000000000000000000000000000000000000000006813 189.0
DYD2_k127_6558032_3 DNA binding protein - - - 0.0001328 53.0
DYD2_k127_6572344_0 COG1208 Nucleoside-diphosphate-sugar pyrophosphorylase involved in lipopolysaccharide biosynthesis translation initiation factor 2B, gamma epsilon subunits (eIF-2Bgamma eIF-2Bepsilon) K04042 - 2.3.1.157,2.7.7.23 0.00000000000000000000000000000000000000000000000000000000000000000000000005988 264.0
DYD2_k127_6572344_1 LssY C-terminus - - - 0.00000008228 61.0
DYD2_k127_664251_0 Possible Fer4-like domain in RNase L inhibitor, RLI K06174 - - 1.021e-217 692.0
DYD2_k127_664251_1 Belongs to the OMP decarboxylase family. Type 2 subfamily K01591 GO:0003674,GO:0003824,GO:0004590,GO:0006139,GO:0006220,GO:0006221,GO:0006725,GO:0006753,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009117,GO:0009165,GO:0009218,GO:0009220,GO:0009259,GO:0009260,GO:0009987,GO:0016829,GO:0016830,GO:0016831,GO:0018130,GO:0019438,GO:0019637,GO:0019693,GO:0034641,GO:0034654,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0046390,GO:0046483,GO:0055086,GO:0071704,GO:0072527,GO:0072528,GO:0090407,GO:1901135,GO:1901137,GO:1901293,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576 4.1.1.23 0.00000000000000000000000000000000000000000000000000000000000000000000000000000368 270.0
DYD2_k127_664251_2 Zinc phosphodiesterase, which displays some tRNA 3'- processing endonuclease activity. Probably involved in tRNA maturation, by removing a 3'-trailer from precursor tRNA K00784 - 3.1.26.11 0.000000000000000000000000000000000000000000000000000000000000000000000000000003805 271.0
DYD2_k127_664251_3 Multicopper oxidase - - - 0.00000000000000000000000000000000000000003136 173.0
DYD2_k127_664251_4 RNA methylase K07446 - 2.1.1.213 0.000000000000000000000000000000000001096 153.0
DYD2_k127_664251_5 Glucose sorbosone - - - 0.0004041 52.0
DYD2_k127_6653555_0 Part of the phosphoribosylformylglycinamidine synthase complex involved in the purines biosynthetic pathway. Catalyzes the ATP-dependent conversion of formylglycinamide ribonucleotide (FGAR) and glutamine to yield formylglycinamidine ribonucleotide (FGAM) and glutamate. The FGAM synthase complex is composed of three subunits. PurQ produces an ammonia molecule by converting glutamine to glutamate. PurL transfers the ammonia molecule to FGAR to form FGAM in an ATP-dependent manner. PurS interacts with PurQ and PurL and is thought to assist in the transfer of the ammonia molecule from PurQ to PurL K01952 - 6.3.5.3 2.24e-244 785.0
DYD2_k127_6653555_1 Belongs to the aldehyde dehydrogenase family K00128 - 1.2.1.3 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002343 602.0
DYD2_k127_6653555_10 Protein of unknown function (DUF962) - - - 0.00000000000001249 80.0
DYD2_k127_6653555_11 X-Pro dipeptidyl-peptidase (S15 family) K06889 - - 0.000000000005464 76.0
DYD2_k127_6653555_12 structural constituent of ribosome K02995 GO:0000462,GO:0003674,GO:0003735,GO:0005198,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0006139,GO:0006364,GO:0006396,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0009987,GO:0010467,GO:0015935,GO:0016070,GO:0016072,GO:0022613,GO:0022626,GO:0022627,GO:0030490,GO:0032991,GO:0034470,GO:0034641,GO:0034660,GO:0042254,GO:0042274,GO:0043170,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0044085,GO:0044237,GO:0044238,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:0046483,GO:0071704,GO:0071840,GO:0090304,GO:1901360,GO:1990904 - 0.000000000007571 70.0
DYD2_k127_6653555_13 Belongs to the aldehyde dehydrogenase family K00128 - 1.2.1.3 0.0000000001177 62.0
DYD2_k127_6653555_14 DNA binding protein - - - 0.000000003227 66.0
DYD2_k127_6653555_15 - - - - 0.0000001041 59.0
DYD2_k127_6653555_16 Phage integrase family - - - 0.0003546 51.0
DYD2_k127_6653555_17 LVIVD repeat - - - 0.0003704 53.0
DYD2_k127_6653555_2 Aldehyde dehydrogenase family K00294 - 1.2.1.88 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001183 443.0
DYD2_k127_6653555_3 Belongs to the class-I aminoacyl-tRNA synthetase family K01887 - 6.1.1.19 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002061 416.0
DYD2_k127_6653555_4 Voltage gated chloride channel K03281 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003866 326.0
DYD2_k127_6653555_5 Part of the phosphoribosylformylglycinamidine synthase complex involved in the purines biosynthetic pathway. Catalyzes the ATP-dependent conversion of formylglycinamide ribonucleotide (FGAR) and glutamine to yield formylglycinamidine ribonucleotide (FGAM) and glutamate. The FGAM synthase complex is composed of three subunits. PurQ produces an ammonia molecule by converting glutamine to glutamate. PurL transfers the ammonia molecule to FGAR to form FGAM in an ATP-dependent manner. PurS interacts with PurQ and PurL and is thought to assist in the transfer of the ammonia molecule from PurQ to PurL K01952 - 6.3.5.3 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000002153 298.0
DYD2_k127_6653555_6 Urate oxidase N-terminal - - - 0.000000000000000000000000006743 121.0
DYD2_k127_6653555_7 Protein of unknown function (DUF1016) - - - 0.00000000000000000000009116 101.0
DYD2_k127_6653555_8 haloacid dehalogenase-like hydrolase - - - 0.00000000000000000021 98.0
DYD2_k127_6653555_9 Part of the phosphoribosylformylglycinamidine synthase complex involved in the purines biosynthetic pathway. Catalyzes the ATP-dependent conversion of formylglycinamide ribonucleotide (FGAR) and glutamine to yield formylglycinamidine ribonucleotide (FGAM) and glutamate. The FGAM synthase complex is composed of three subunits. PurQ produces an ammonia molecule by converting glutamine to glutamate. PurL transfers the ammonia molecule to FGAR to form FGAM in an ATP-dependent manner. PurS interacts with PurQ and PurL and is thought to assist in the transfer of the ammonia molecule from PurQ to PurL K01952 - 6.3.5.3 0.0000000000000001592 83.0
DYD2_k127_6663694_0 Has ATPase and non-specific DNA-binding activities K07456 - - 0.00000000000000000000000000000000000000000000000000000001784 214.0
DYD2_k127_6663694_1 Belongs to the UPF0218 family K09735 - - 0.00000000000000000000711 102.0
DYD2_k127_6663694_2 Winged helix-turn-helix DNA-binding - - - 0.00004051 55.0
DYD2_k127_6695455_0 NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be a menaquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient K00333 GO:0003674,GO:0003824,GO:0003954,GO:0008137,GO:0008150,GO:0008152,GO:0016491,GO:0016651,GO:0016655,GO:0050136,GO:0055114 1.6.5.3 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002376 334.0
DYD2_k127_6695455_1 NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be a menaquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient K00332 - 1.6.5.3 0.0000000000000000000004512 98.0
DYD2_k127_6697440_0 Involved in the cellular defense against the biological effects of O6-methylguanine (O6-MeG) and O4-methylthymine (O4-MeT) in DNA. Repairs the methylated nucleobase in DNA by stoichiometrically transferring the methyl group to a cysteine residue in the enzyme. This is a suicide reaction the enzyme is irreversibly inactivated K00567 - 2.1.1.63 0.00000000000000000000000000000000003476 140.0
DYD2_k127_6697440_1 Functions by promoting the formation of the first peptide bond K03263 - - 0.00000000000003548 86.0
DYD2_k127_6697440_2 OsmC-like protein - - - 0.0007961 48.0
DYD2_k127_6708678_0 acetyl-CoA carboxylase, biotin carboxylase K01961 - 6.3.4.14,6.4.1.2 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001724 410.0
DYD2_k127_6708678_1 glyceraldehyde-3-phosphate dehydrogenase (NAD(P)+) (phosphorylating) activity K00134,K00150,K03340 - 1.2.1.12,1.2.1.59,1.4.1.16 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006289 378.0
DYD2_k127_6708678_2 PFAM thioesterase superfamily - - - 0.00000000000000000000000000000000000000000000000000000002601 205.0
DYD2_k127_6708678_3 A G-specific K03575 - - 0.0000000000000000000000000000000000000000000000000001294 192.0
DYD2_k127_6708678_4 CAAX protease self-immunity K07052 - - 0.00000007014 63.0
DYD2_k127_698981_0 TIGRFAM isocitrate dehydrogenase, NADP-dependent, prokaryotic type K00031 - 1.1.1.42 1.153e-200 631.0
DYD2_k127_698981_1 - - - - 0.00000000000000000000000000000000000000000006128 166.0
DYD2_k127_698981_10 Predicted membrane protein (DUF2061) - - - 0.00004446 49.0
DYD2_k127_698981_11 PFAM peptidase M6, immune inhibitor A K09607 - - 0.0001582 52.0
DYD2_k127_698981_12 - - - - 0.0002215 51.0
DYD2_k127_698981_2 PFAM thioesterase superfamily - - - 0.0000000000000000000000000000000000000002834 155.0
DYD2_k127_698981_3 Protein of unknown function DUF72 - - - 0.0000000000000000000000001394 117.0
DYD2_k127_698981_4 Domain of unknown function (DUF378) K09779 - - 0.000000000000001592 79.0
DYD2_k127_698981_5 PFAM peptidase U32 K08303 - - 0.0000000000001741 78.0
DYD2_k127_698981_6 SCO1/SenC - - - 0.0000000001341 69.0
DYD2_k127_698981_7 Histone-like DNA-binding protein which is capable of wrapping DNA to stabilize it, and thus to prevent its denaturation under extreme environmental conditions K03530 - - 0.00000000263 64.0
DYD2_k127_698981_8 Fibronectin type 3 domain K01179,K01361,K01637,K01729,K09942,K20276 - 3.2.1.4,3.4.21.96,4.1.3.1,4.2.2.3 0.000000004936 72.0
DYD2_k127_698981_9 Cytochrome C biogenesis protein transmembrane region - - - 0.00000002589 64.0
DYD2_k127_745215_0 ATPase P-type (Transporting), HAD superfamily, subfamily IC K01537 - 3.6.3.8 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004276 631.0
DYD2_k127_745215_1 integrase family K04763 - - 0.000001891 60.0
DYD2_k127_790726_0 Nucleotidyl transferase K00973 - 2.7.7.24 0.00000000000000000000000000000000000007594 156.0
DYD2_k127_790726_1 PFAM glycosyl transferase family 39 K00728 - 2.4.1.109 0.0000000000000002022 88.0
DYD2_k127_810800_0 Catalyzes the attachment of threonine to tRNA(Thr) in a two-step reaction L-threonine is first activated by ATP to form Thr-AMP and then transferred to the acceptor end of tRNA(Thr) K01868 GO:0003674,GO:0003824,GO:0004812,GO:0004829,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006082,GO:0006139,GO:0006399,GO:0006412,GO:0006418,GO:0006435,GO:0006518,GO:0006520,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0016070,GO:0016874,GO:0016875,GO:0019538,GO:0019752,GO:0034641,GO:0034645,GO:0034660,GO:0043038,GO:0043039,GO:0043043,GO:0043170,GO:0043436,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044281,GO:0044424,GO:0044464,GO:0046483,GO:0071704,GO:0090304,GO:0140098,GO:0140101,GO:1901360,GO:1901564,GO:1901566,GO:1901576 6.1.1.3 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002727 623.0
DYD2_k127_810800_1 Belongs to the pirin family K06911 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001072 326.0
DYD2_k127_810800_2 Belongs to the short-chain dehydrogenases reductases (SDR) family K05886 - 1.1.1.276 0.00000000000000000000000000000000000000000000000000000000000000000000000000002105 268.0
DYD2_k127_810800_3 Belongs to the enoyl-CoA hydratase isomerase family K01715 - 4.2.1.17 0.0000000000000000000000000000000000000000000000000000000000000000000005809 247.0
DYD2_k127_810800_4 TIGRFAM daunorubicin resistance ABC transporter ATPase subunit K01990 - - 0.00000000000000000000000000000000000000000006904 174.0
DYD2_k127_810800_5 Structure-specific nuclease with 5'-flap endonuclease and 5'-3' exonuclease activities involved in DNA replication and repair. During DNA replication, cleaves the 5'-overhanging flap structure that is generated by displacement synthesis when DNA polymerase encounters the 5'-end of a downstream Okazaki fragment. Binds the unpaired 3'-DNA end and kinks the DNA to facilitate 5' cleavage specificity. Cleaves one nucleotide into the double- stranded DNA from the junction in flap DNA, leaving a nick for ligation. Also involved in the base excision repair (BER) pathway. Acts as a genome stabilization factor that prevents flaps from equilibrating into structurs that lead to duplications and deletions. Also possesses 5'-3' exonuclease activity on nicked or gapped double-stranded DNA K04799 - - 0.000000000000000000000000000000000002651 150.0
DYD2_k127_810800_6 - - - - 0.00000004329 66.0
DYD2_k127_829996_0 ig-like, plexins, transcription factors - - - 0.00005026 57.0
DYD2_k127_842982_0 PFAM peptidase U62 modulator of DNA gyrase K03568 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003011 384.0
DYD2_k127_842982_1 SbcCD cleaves DNA hairpin structures. These structures can inhibit DNA replication and are intermediates in certain DNA recombination reactions. The complex acts as a 3'- 5' double strand exonuclease that can open hairpins. It also has a 5' single-strand endonuclease activity K03547,K05970 - 3.1.1.53 0.0000000000000000000000000000000000000000000000000000152 203.0
DYD2_k127_842982_2 Putative exonuclease SbcCD, C subunit K03546 - - 0.00000000000000000000000000000000000000000006469 184.0
DYD2_k127_842982_3 Putative modulator of DNA gyrase K03592 - - 0.0000000000001131 83.0
DYD2_k127_842982_4 Copper binding proteins, plastocyanin/azurin family - - - 0.000000000076 69.0
DYD2_k127_842982_5 Copper binding proteins, plastocyanin/azurin family - - - 0.0000000713 64.0
DYD2_k127_846233_0 Belongs to the alpha-IPM synthase homocitrate synthase family K01649 - 2.3.3.13 0.000000000000000000000000000000000000000000000000000000000000000000000000001822 265.0
DYD2_k127_851052_0 Catalyzes the attachment of glutamate to tRNA(Glu) in a two-step reaction glutamate is first activated by ATP to form Glu-AMP and then transferred to the acceptor end of tRNA(Glu) K01885 - 6.1.1.17 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002495 426.0
DYD2_k127_866060_0 Catalyzes the NAD-dependent oxidative cleavage of spermidine and the subsequent transfer of the butylamine moiety of spermidine to the epsilon-amino group of a specific lysine residue of the eIF-5A precursor protein to form the intermediate deoxyhypusine residue K00809 - 2.5.1.46 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001587 385.0
DYD2_k127_866060_1 Directs the termination of nascent peptide synthesis (translation) in response to the termination codons UAA, UAG and UGA K03265 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001666 379.0
DYD2_k127_866060_2 4Fe-4S single cluster domain K07129 - - 0.0000000000000000000000000002174 121.0
DYD2_k127_866060_3 Transglutaminase/protease-like homologues K22452 - 2.3.2.13 0.0007838 53.0
DYD2_k127_866688_0 Cobalamin adenosyltransferase K00798 - 2.5.1.17 0.000000000000000000000000000000000000000000000000000000000000000000000002226 250.0
DYD2_k127_866688_1 Catalyzes the methyl esterification of L-isoaspartyl residues in peptides and proteins that result from spontaneous decomposition of normal L-aspartyl and L-asparaginyl residues. It plays a role in the repair and or degradation of damaged proteins K00573 - 2.1.1.77 0.0000000000000000000000000000000000000000000000000001193 194.0
DYD2_k127_866688_2 Involved in regulation of DNA replication K10725 - - 0.0000000000000000000000000000000003852 139.0
DYD2_k127_866688_3 - - - - 0.000000000000000000000000003475 116.0
DYD2_k127_883865_0 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase - - - 0.0000000000000000000000000000000000000000000000000000000000000003902 246.0
DYD2_k127_883865_1 DnaB-like helicase C terminal domain K08482 - - 0.000000000000000000000000000000000000000000000000001441 196.0
DYD2_k127_883865_2 Channel that opens in response to stretch forces in the membrane lipid bilayer. May participate in the regulation of osmotic pressure changes within the cell K03282 GO:0003674,GO:0005215,GO:0005575,GO:0006810,GO:0006811,GO:0006884,GO:0008150,GO:0008361,GO:0008381,GO:0009987,GO:0009992,GO:0015267,GO:0016020,GO:0016021,GO:0016043,GO:0019725,GO:0022803,GO:0022836,GO:0022857,GO:0030104,GO:0031224,GO:0032535,GO:0042592,GO:0044425,GO:0048878,GO:0051179,GO:0051234,GO:0055082,GO:0055085,GO:0065007,GO:0065008,GO:0071840,GO:0090066 - 0.00000000000000000000000000000000000001016 154.0
DYD2_k127_883865_3 COG1502 Phosphatidylserine phosphatidylglycerophosphate cardiolipi n synthases and related enzymes - - - 0.0000000000000000000000000000000000002042 160.0
DYD2_k127_883865_4 Bacterial transferase hexapeptide (six repeats) K02617 - - 0.000000000000000000000000000000001506 136.0
DYD2_k127_883865_5 serine-type endopeptidase activity K13908,K21125 - - 0.000000000000000000008772 107.0
DYD2_k127_883865_6 Belongs to the 5-formyltetrahydrofolate cyclo-ligase family K01934 - 6.3.3.2 0.000000000000000002989 89.0
DYD2_k127_883865_7 Sigma-54 interaction domain K19641 - - 0.00000000000000001173 88.0
DYD2_k127_883865_8 Participates actively in the response to hyperosmotic and heat shock by preventing the aggregation of stress-denatured proteins, in association with DnaK and GrpE. It is the nucleotide exchange factor for DnaK and may function as a thermosensor. Unfolded proteins bind initially to DnaJ K03687 GO:0000166,GO:0000774,GO:0003674,GO:0005488,GO:0005515,GO:0008150,GO:0017076,GO:0030234,GO:0030554,GO:0036094,GO:0050790,GO:0051082,GO:0060589,GO:0060590,GO:0065007,GO:0065009,GO:0097159,GO:0098772,GO:1901265,GO:1901363 - 0.00000000000000153 83.0
DYD2_k127_883865_9 transport - - - 0.0004786 53.0
DYD2_k127_908920_0 The glycine cleavage system catalyzes the degradation of glycine. The P protein binds the alpha-amino group of glycine through its pyridoxal phosphate cofactor K00283 - 1.4.4.2 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000203 550.0
DYD2_k127_908920_1 ATP-NAD kinase - - - 0.000000000000000000000000000000000000000000000002894 186.0
DYD2_k127_924375_0 KH, type 1, domain K07041 - - 2.667e-227 723.0
DYD2_k127_924375_1 Component of the proteasome core, a large protease complex with broad specificity involved in protein degradation K03433 GO:0000502,GO:0003674,GO:0003824,GO:0004175,GO:0004298,GO:0005575,GO:0005622,GO:0005623,GO:0005839,GO:0006508,GO:0006807,GO:0008150,GO:0008152,GO:0008233,GO:0009056,GO:0009057,GO:0009987,GO:0010498,GO:0016787,GO:0019538,GO:0019774,GO:0030163,GO:0032991,GO:0043170,GO:0044237,GO:0044238,GO:0044248,GO:0044257,GO:0044260,GO:0044265,GO:0044267,GO:0044424,GO:0044464,GO:0051603,GO:0070003,GO:0070011,GO:0071704,GO:0140096,GO:1901564,GO:1901565,GO:1901575,GO:1902494,GO:1905368,GO:1905369 3.4.25.1 0.0000000000000000000000000000000000000000000000000000000000001784 222.0
DYD2_k127_924375_2 Catalyzes two steps in the biosynthesis of coenzyme A. In the first step cysteine is conjugated to 4'-phosphopantothenate to form 4-phosphopantothenoylcysteine, in the latter compound is decarboxylated to form 4'-phosphopantotheine K13038 - 4.1.1.36,6.3.2.5 0.0000000000000000000002538 104.0
DYD2_k127_924375_3 kinase, sugar kinase superfamily K06982 - 2.7.1.169 0.000000000000000000001046 108.0
DYD2_k127_924375_4 Catalyzes the formation of 2'O-methylated cytidine (Cm32) or 2'O-methylated uridine (Um32) at position 32 in tRNA K02533 - - 0.000002953 59.0
DYD2_k127_926656_0 carbamoyl-phosphate synthase (glutamine-hydrolyzing) activity K01955 - 6.3.5.5 6.675e-261 824.0
DYD2_k127_926656_1 Catalyzes the attachment of alanine to tRNA(Ala) in a two-step reaction alanine is first activated by ATP to form Ala- AMP and then transferred to the acceptor end of tRNA(Ala). Also edits incorrectly charged Ser-tRNA(Ala) and Gly-tRNA(Ala) via its editing domain K01872 - 6.1.1.7 4.884e-217 706.0
DYD2_k127_926656_2 Belongs to the CarA family K01956 GO:0000050,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005951,GO:0006082,GO:0006520,GO:0006525,GO:0006526,GO:0006807,GO:0008150,GO:0008152,GO:0008652,GO:0009058,GO:0009064,GO:0009084,GO:0009987,GO:0016053,GO:0019627,GO:0019752,GO:0032991,GO:0034641,GO:0043436,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0044283,GO:0044424,GO:0044444,GO:0044464,GO:0046394,GO:0071704,GO:0071941,GO:1901564,GO:1901566,GO:1901576,GO:1901605,GO:1901607,GO:1902494 6.3.5.5 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002811 376.0
DYD2_k127_926656_3 COG0608 Single-stranded DNA-specific exonuclease K07463 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000001382 315.0
DYD2_k127_926656_4 glycosyl transferase family - - - 0.000000000000000000000000000000000000000002945 173.0
DYD2_k127_926656_5 Formation of pseudouridine at positions 38, 39 and 40 in the anticodon stem and loop of transfer RNAs K06173 GO:0001522,GO:0003674,GO:0003824,GO:0006139,GO:0006396,GO:0006399,GO:0006400,GO:0006725,GO:0006807,GO:0008033,GO:0008150,GO:0008152,GO:0009451,GO:0009982,GO:0009987,GO:0010467,GO:0016070,GO:0016853,GO:0016866,GO:0031119,GO:0034470,GO:0034641,GO:0034660,GO:0043170,GO:0043412,GO:0044237,GO:0044238,GO:0046483,GO:0071704,GO:0090304,GO:1901360 5.4.99.12 0.00000000000000000000000000000000000000275 158.0
DYD2_k127_926656_6 Component of the proteasome core, a large protease complex with broad specificity involved in protein degradation K03433 GO:0000502,GO:0003674,GO:0003824,GO:0004175,GO:0005575,GO:0005622,GO:0005623,GO:0005839,GO:0006508,GO:0006807,GO:0008150,GO:0008152,GO:0008233,GO:0009056,GO:0009057,GO:0009987,GO:0010498,GO:0016787,GO:0019538,GO:0019774,GO:0030163,GO:0032991,GO:0043170,GO:0044237,GO:0044238,GO:0044248,GO:0044257,GO:0044260,GO:0044265,GO:0044267,GO:0044424,GO:0044464,GO:0051603,GO:0070011,GO:0071704,GO:0140096,GO:1901564,GO:1901565,GO:1901575,GO:1902494,GO:1905368,GO:1905369 3.4.25.1 0.00000000000000000000000000000001047 136.0
DYD2_k127_926656_7 Cytotoxic translational repressor of toxin-antitoxin stability system K06218 - - 0.00000002806 58.0
DYD2_k127_926656_8 threonine-type endopeptidase activity K02725,K13141 GO:0000003,GO:0000502,GO:0001530,GO:0001673,GO:0001703,GO:0002682,GO:0002683,GO:0002861,GO:0002862,GO:0003006,GO:0003674,GO:0003676,GO:0003723,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005634,GO:0005654,GO:0005737,GO:0005813,GO:0005815,GO:0005829,GO:0005839,GO:0005844,GO:0005856,GO:0006464,GO:0006508,GO:0006511,GO:0006807,GO:0006996,GO:0006997,GO:0007275,GO:0007276,GO:0007281,GO:0007283,GO:0007286,GO:0007289,GO:0007290,GO:0007291,GO:0007349,GO:0007369,GO:0007370,GO:0008150,GO:0008152,GO:0008289,GO:0009056,GO:0009057,GO:0009653,GO:0009790,GO:0009987,GO:0010004,GO:0010498,GO:0015630,GO:0016043,GO:0016579,GO:0019538,GO:0019773,GO:0019941,GO:0019953,GO:0022412,GO:0022414,GO:0030154,GO:0030163,GO:0031347,GO:0031348,GO:0031974,GO:0031981,GO:0032101,GO:0032102,GO:0032501,GO:0032502,GO:0032504,GO:0032991,GO:0036211,GO:0043073,GO:0043161,GO:0043170,GO:0043226,GO:0043227,GO:0043228,GO:0043229,GO:0043231,GO:0043232,GO:0043233,GO:0043412,GO:0043632,GO:0043687,GO:0044237,GO:0044238,GO:0044248,GO:0044257,GO:0044260,GO:0044265,GO:0044267,GO:0044422,GO:0044424,GO:0044428,GO:0044430,GO:0044444,GO:0044446,GO:0044464,GO:0044703,GO:0048232,GO:0048468,GO:0048515,GO:0048519,GO:0048583,GO:0048585,GO:0048598,GO:0048609,GO:0048646,GO:0048856,GO:0048869,GO:0050727,GO:0050728,GO:0050776,GO:0050777,GO:0050789,GO:0051603,GO:0051704,GO:0065007,GO:0070013,GO:0070646,GO:0070647,GO:0071704,GO:0071840,GO:0080134,GO:0097159,GO:0097367,GO:1901363,GO:1901564,GO:1901565,GO:1901575,GO:1902494,GO:1905368,GO:1905369,GO:1990904 3.4.25.1 0.00000003375 63.0
DYD2_k127_926656_9 - - - - 0.0003809 48.0
DYD2_k127_928234_0 Required for chromosome condensation and partitioning K03529 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001906 632.0
DYD2_k127_928234_1 chromosome segregation and condensation protein ScpA K05896 - - 0.00000000000000000000000000000007376 140.0
DYD2_k127_948001_0 Belongs to the V-ATPase 116 kDa subunit family K02123 - - 0.000000000000000000000000000000000000000000000000000000000000005405 244.0
DYD2_k127_948001_1 Produces ATP from ADP in the presence of a proton gradient across the membrane K02119 - - 0.000000000000000000000000000000001612 139.0
DYD2_k127_948001_2 PFAM H transporting two-sector ATPase C subunit K02124 - - 0.000000000000000002792 87.0
DYD2_k127_948001_3 Produces ATP from ADP in the presence of a proton gradient across the membrane K02121 - - 0.000000000003411 74.0
DYD2_k127_948001_4 Papain family cysteine protease - - - 0.0003635 53.0
DYD2_k127_95061_0 Exchanges the guanine residue with 7-cyano-7- deazaguanine (preQ0) at position 15 in the dihydrouridine loop (D- loop) of archaeal tRNAs K18779 GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006139,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0008616,GO:0009058,GO:0009116,GO:0009119,GO:0009163,GO:0009987,GO:0018130,GO:0019438,GO:0034404,GO:0034641,GO:0034654,GO:0042455,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0044283,GO:0044424,GO:0044464,GO:0046116,GO:0046483,GO:0055086,GO:0071704,GO:1901135,GO:1901137,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576,GO:1901657,GO:1901659 2.4.2.48 0.0000000000000000000000000000000000000000000000000000008021 204.0
DYD2_k127_95061_1 PFAM peptidylprolyl isomerase FKBP-type K01802,K03775 - 5.2.1.8 0.00000000000000000000000000000000000000000004892 169.0