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Overview

ID MAG00928
Name DYD2_bin.52
Sample SMP0026
Taxonomy
Kingdom Bacteria
Phylum Chloroflexota
Class Limnocylindria
Order QHBO01
Family QHBO01
Genus
Species
Assembly information
Completeness (%) 81.22
Contamination (%) 1.58
GC content (%) 71.0
N50 (bp) 16,019
Genome size (bp) 2,136,372

Location

Module

Module ID Module name Total genes Total steps Contain genes Contain steps Percentage of genes Percentage of steps

Genes1927

Gene name Description KEGG GOs EC E-value Score Sequence
DYD2_k127_1006389_0 NAD(P)-binding Rossmann-like domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003197 552.0
DYD2_k127_1006389_1 it binds specifically double-stranded DNA at a 9 bp consensus (dnaA box) 5'-TTATC CA A CA A-3'. DnaA binds to ATP and to acidic phospholipids K02313 GO:0000166,GO:0003674,GO:0003676,GO:0003677,GO:0003688,GO:0003690,GO:0003824,GO:0005488,GO:0005524,GO:0005575,GO:0005618,GO:0005622,GO:0005623,GO:0005737,GO:0005886,GO:0006139,GO:0006163,GO:0006164,GO:0006172,GO:0006259,GO:0006260,GO:0006261,GO:0006270,GO:0006725,GO:0006753,GO:0006793,GO:0006796,GO:0006807,GO:0008144,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009117,GO:0009123,GO:0009124,GO:0009126,GO:0009127,GO:0009132,GO:0009133,GO:0009135,GO:0009136,GO:0009150,GO:0009152,GO:0009156,GO:0009161,GO:0009165,GO:0009167,GO:0009168,GO:0009179,GO:0009180,GO:0009185,GO:0009188,GO:0009259,GO:0009260,GO:0009987,GO:0016020,GO:0016311,GO:0016462,GO:0016787,GO:0016817,GO:0016818,GO:0016887,GO:0017076,GO:0017111,GO:0018130,GO:0019438,GO:0019637,GO:0019693,GO:0030312,GO:0030554,GO:0032553,GO:0032555,GO:0032559,GO:0034641,GO:0034645,GO:0034654,GO:0035639,GO:0036094,GO:0043167,GO:0043168,GO:0043170,GO:0043565,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044271,GO:0044281,GO:0044424,GO:0044464,GO:0046031,GO:0046390,GO:0046483,GO:0055086,GO:0071704,GO:0071944,GO:0072521,GO:0072522,GO:0090304,GO:0090407,GO:0097159,GO:0097367,GO:1901135,GO:1901137,GO:1901265,GO:1901293,GO:1901360,GO:1901362,GO:1901363,GO:1901564,GO:1901566,GO:1901576,GO:1990837 - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005875 474.0
DYD2_k127_1006389_2 AAA domain, putative AbiEii toxin, Type IV TA system K01990 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003079 365.0
DYD2_k127_1006389_3 ABC-2 family transporter protein K01992 - - 0.000000000000000000000000000000000000000000000000000000000000000002944 237.0
DYD2_k127_1006389_4 PFAM 60 kDa inner membrane insertion protein K03217 - - 0.0000000000000000000000000000006287 136.0
DYD2_k127_1006389_5 R3H domain protein K06346 - - 0.0000000000000000000000000008169 131.0
DYD2_k127_1006389_6 Could be involved in insertion of integral membrane proteins into the membrane K08998 - - 0.00000000000000000000001444 101.0
DYD2_k127_1006389_7 Belongs to the bacterial ribosomal protein bL34 family K02914 - - 0.000000000006335 66.0
DYD2_k127_1006389_8 - - - - 0.00000001889 66.0
DYD2_k127_1006389_9 Ribonuclease P K03536 - 3.1.26.5 0.000000535 60.0
DYD2_k127_1049756_0 prolyl-tRNA aminoacylation K01881 - 6.1.1.15 4.747e-194 622.0
DYD2_k127_1049756_1 Thermophilic metalloprotease (M29) K19689 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006395 383.0
DYD2_k127_1049756_2 Major facilitator Superfamily - - - 0.000000000000000000000000000000000000000000000006446 191.0
DYD2_k127_1049756_3 Phosphate acyltransferases K00655 - 2.3.1.51 0.00000000008548 72.0
DYD2_k127_1049756_4 A domain in the BMP inhibitor chordin and in microbial proteins. - - - 0.000006373 49.0
DYD2_k127_1049756_5 Luciferase-like monooxygenase K04091 - 1.14.14.5 0.0004604 43.0
DYD2_k127_1078419_0 The glycine cleavage system catalyzes the degradation of glycine. The P protein binds the alpha-amino group of glycine through its pyridoxal phosphate cofactor K00283 - 1.4.4.2 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003017 586.0
DYD2_k127_1078419_1 ABC transporter substrate-binding protein K15580 - - 0.000000000000000000000000000000000000001991 159.0
DYD2_k127_1078419_2 DNA-templated transcription, initiation K03088 - - 0.0000000000000000000000000000000000000465 151.0
DYD2_k127_1078419_3 The glycine cleavage system catalyzes the degradation of glycine. The P protein binds the alpha-amino group of glycine through its pyridoxal phosphate cofactor K00282 - 1.4.4.2 0.000000000000000000000000000003286 124.0
DYD2_k127_1090680_0 Peptidase dimerisation domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001019 368.0
DYD2_k127_1090680_1 Major facilitator Superfamily - - - 0.0000000000000000000000000000000000000000009164 172.0
DYD2_k127_1090680_2 - - - - 0.000004099 59.0
DYD2_k127_1090680_3 Phosphate acyltransferases K00655 - 2.3.1.51 0.00001851 55.0
DYD2_k127_1129746_0 Provides the (R)-glutamate required for cell wall biosynthesis K01776,K02428 GO:0000270,GO:0003674,GO:0003824,GO:0005488,GO:0005515,GO:0006022,GO:0006023,GO:0006024,GO:0006807,GO:0008150,GO:0008152,GO:0008881,GO:0009058,GO:0009059,GO:0009252,GO:0009273,GO:0009987,GO:0016853,GO:0016854,GO:0016855,GO:0030203,GO:0034645,GO:0036361,GO:0042546,GO:0042802,GO:0043170,GO:0044036,GO:0044038,GO:0044085,GO:0044237,GO:0044249,GO:0044260,GO:0047661,GO:0070589,GO:0071554,GO:0071704,GO:0071840,GO:1901135,GO:1901137,GO:1901564,GO:1901566,GO:1901576 3.6.1.66,5.1.1.3 0.0000000000000000000000000000000000000000000000000000001057 201.0
DYD2_k127_1129746_1 NUBPL iron-transfer P-loop NTPase K02282 - - 0.000000000000000000000000000000000000000000008497 177.0
DYD2_k127_1129746_2 UvrD/REP helicase N-terminal domain K03657,K07465 - 3.6.4.12 0.0000000000000000000000000000000000000005318 154.0
DYD2_k127_1129746_3 Methyltransferase type 12 - - - 0.0000000000000000000004575 106.0
DYD2_k127_1159292_0 Belongs to the thiolase family K00626,K02615 - 2.3.1.174,2.3.1.223,2.3.1.9 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003427 520.0
DYD2_k127_1159292_1 F420-dependent oxidoreductase, G6PDH family K15510 - 1.1.98.2 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002552 473.0
DYD2_k127_1159292_10 FR47-like protein - - - 0.000000000000000000000000000000000000000000118 171.0
DYD2_k127_1159292_11 Haloacid dehalogenase-like hydrolase - - - 0.0000000000000000000000000000000000000003489 168.0
DYD2_k127_1159292_12 4Fe-4S binding domain - - - 0.000000000000000000000000000000000000001232 149.0
DYD2_k127_1159292_13 Bacterial extracellular solute-binding protein K11069 - - 0.000000000000000000000000000000005453 141.0
DYD2_k127_1159292_14 2'-5' RNA ligase superfamily - - - 0.0000000000000000000000000000006585 130.0
DYD2_k127_1159292_15 SnoaL-like domain - - - 0.000000000000000000000000000002555 124.0
DYD2_k127_1159292_16 Transcriptional regulatory protein, C terminal - - - 0.000000000000000000000000000002578 122.0
DYD2_k127_1159292_17 Ethyl tert-butyl ether degradation - - - 0.00000000000000000003218 94.0
DYD2_k127_1159292_18 PFAM Acetyltransferase (GNAT) family - - - 0.0000000000000000003842 100.0
DYD2_k127_1159292_19 Uncharacterized conserved protein (DUF2277) - - - 0.00000000000000002355 84.0
DYD2_k127_1159292_2 FAD dependent oxidoreductase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004392 366.0
DYD2_k127_1159292_20 PFAM EAL domain protein - - - 0.0000000000000002457 87.0
DYD2_k127_1159292_21 - - - - 0.0000000004742 69.0
DYD2_k127_1159292_22 PFAM Acetyltransferase (GNAT) family - - - 0.000139 54.0
DYD2_k127_1159292_3 Enoyl-CoA hydratase/isomerase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003529 335.0
DYD2_k127_1159292_4 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain K00074 - 1.1.1.157 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002088 325.0
DYD2_k127_1159292_5 Belongs to the enoyl-CoA hydratase isomerase family K01692,K01715 - 4.2.1.17 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000283 301.0
DYD2_k127_1159292_6 enoyl-CoA hydratase K15866 - 5.3.3.18 0.00000000000000000000000000000000000000000000000000000000000000003628 231.0
DYD2_k127_1159292_7 Binding-protein-dependent transport system inner membrane component K11071 - - 0.000000000000000000000000000000000000000000000000000000000002631 219.0
DYD2_k127_1159292_8 AAA domain - - - 0.0000000000000000000000000000000000000000000001518 172.0
DYD2_k127_1159292_9 Binding-protein-dependent transport system inner membrane component K11070 - - 0.000000000000000000000000000000000000000000002809 184.0
DYD2_k127_1176480_0 ATPases associated with a variety of cellular activities K16786,K16787 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000215 563.0
DYD2_k127_1176480_1 cobalt transport K16785 - - 0.000000000000000000000000000000000000000000000000000000001807 226.0
DYD2_k127_1176480_2 Glycine cleavage T-protein C-terminal barrel domain K00605 - 2.1.2.10 0.000000000000000000000000000000000000000000000000000002111 207.0
DYD2_k127_1176480_3 ABC-type cobalt transport system, permease component K16925 - - 0.000000000000000000000000000000000000000000000000000003917 205.0
DYD2_k127_1176480_4 PFAM GGDEF domain containing protein - - - 0.00000000000000000000000000000000000000007086 175.0
DYD2_k127_1176480_5 PFAM Thiamin pyrophosphokinase, catalytic region K00949 - 2.7.6.2 0.0000000000000000000000000000000000009155 149.0
DYD2_k127_1176480_6 YbaK prolyl-tRNA synthetase associated region - - - 0.000000000000000000000000000000002449 146.0
DYD2_k127_1176480_7 domain protein K21687 - - 0.000000000001901 80.0
DYD2_k127_1269359_0 DEAD/H associated K03724 - - 0.0 1527.0
DYD2_k127_1269359_1 E1-E2 ATPase K01533 - 3.6.3.4 1.752e-239 756.0
DYD2_k127_1269359_10 PFAM Glyoxalase bleomycin resistance protein dioxygenase K05606 - 5.1.99.1 0.00000000000000000000000000000000000000000000000000000000000001922 222.0
DYD2_k127_1269359_11 helix_turn_helix, arabinose operon control protein - - - 0.0000000000000000000000000000000000000000000000000000000000000501 216.0
DYD2_k127_1269359_12 ABC-type transport system involved in multi-copper enzyme maturation permease component K01992 - - 0.0000000000000000000000000000000000000000000000002097 188.0
DYD2_k127_1269359_13 Diguanylate cyclase phosphodiesterase with PAS PAC - - - 0.000000000000000000000000000000000000000000000004431 196.0
DYD2_k127_1269359_14 ABC-2 family transporter protein K01992 - - 0.0000000000000000000000000000000000000009747 158.0
DYD2_k127_1269359_15 diguanylate cyclase - - - 0.00000000000000000000000000000000000005722 164.0
DYD2_k127_1269359_16 F420H(2)-dependent quinone reductase - - - 0.00000000000000000000000001857 113.0
DYD2_k127_1269359_17 acetyltransferase K06975 - - 0.00000000000000000000000007406 111.0
DYD2_k127_1269359_18 Multicopper oxidase K00368 - 1.7.2.1 0.00000000000000000001502 105.0
DYD2_k127_1269359_19 DSBA-like thioredoxin domain - - - 0.00000000000000000004222 103.0
DYD2_k127_1269359_2 heavy metal translocating P-type ATPase K17686 - 3.6.3.54 5.36e-212 694.0
DYD2_k127_1269359_20 transcriptional regulator - - - 0.0000000000005964 75.0
DYD2_k127_1269359_21 Heavy metal translocating P-type atpase K01533,K01534,K12954,K17686 - 3.6.3.3,3.6.3.4,3.6.3.5,3.6.3.54 0.000000002481 65.0
DYD2_k127_1269359_22 PFAM response regulator receiver - - - 0.000005802 59.0
DYD2_k127_1269359_23 Belongs to the GST superfamily K00799 - 2.5.1.18 0.0001259 48.0
DYD2_k127_1269359_3 Starch synthase catalytic domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004929 487.0
DYD2_k127_1269359_4 Multicopper oxidase K00368 - 1.7.2.1 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004529 471.0
DYD2_k127_1269359_5 Serine hydrolase involved in the detoxification of formaldehyde - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000404 447.0
DYD2_k127_1269359_6 ABC transporter related K01990 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004226 398.0
DYD2_k127_1269359_7 ABC transporter K01990 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009952 387.0
DYD2_k127_1269359_8 histidine kinase dimerisation and phosphoacceptor region K03406,K07673,K07675 - 2.7.13.3 0.000000000000000000000000000000000000000000000000000000000000000000000008483 262.0
DYD2_k127_1269359_9 Two component transcriptional regulator, LuxR family - - - 0.000000000000000000000000000000000000000000000000000000000000000003105 235.0
DYD2_k127_1284228_0 Cation transport protein K03498 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001001 394.0
DYD2_k127_1284228_1 Catalyzes the reductive methylation of 2'-deoxyuridine- 5'-monophosphate (dUMP) to 2'-deoxythymidine-5'-monophosphate (dTMP) while utilizing 5,10-methylenetetrahydrofolate (mTHF) as the methyl donor, and NADPH and FADH(2) as the reductant K03465 - 2.1.1.148 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005972 328.0
DYD2_k127_1284228_2 TrkA-C domain K03499 - - 0.000000000000000000000000000000000000000000000000004321 186.0
DYD2_k127_1284228_3 Thioesterase superfamily - - - 0.000000000000000000000001328 111.0
DYD2_k127_1284228_4 diguanylate cyclase - - - 0.000000000000000000000001433 112.0
DYD2_k127_1377025_0 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) K01214 - 3.2.1.68 8.967e-306 969.0
DYD2_k127_1377025_1 synthase K06044 - 5.4.99.15 1.279e-285 904.0
DYD2_k127_1377025_10 Phosphotransferase enzyme family K00700,K05343,K16146 GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005886,GO:0005975,GO:0005984,GO:0005991,GO:0005992,GO:0006793,GO:0006796,GO:0008150,GO:0008152,GO:0009058,GO:0009311,GO:0009312,GO:0009987,GO:0016020,GO:0016051,GO:0016310,GO:0034637,GO:0040007,GO:0044237,GO:0044238,GO:0044249,GO:0044262,GO:0044424,GO:0044444,GO:0044464,GO:0046351,GO:0046835,GO:0071704,GO:0071944,GO:1901576 2.4.1.18,2.7.1.175,3.2.1.1,5.4.99.16 0.0000000000000000000000000000000000000000000000000000000000000000000000000003428 272.0
DYD2_k127_1377025_11 ABC transporter K02003 - - 0.0000000000000000000000000000000000000000000000000001312 201.0
DYD2_k127_1377025_12 PFAM DNA repair protein RadC K03630 - - 0.00000000000000000000000000000000000000000000001662 178.0
DYD2_k127_1377025_13 Formyl transferase K11175 - 2.1.2.2 0.000000000000000000000000000000000006993 146.0
DYD2_k127_1377025_14 TIGRFAM cell shape determining protein, MreB Mrl family K03569 - - 0.0000000000000000000000000000000009019 144.0
DYD2_k127_1377025_15 Double zinc ribbon - - - 0.0000000000000000000000000000102 126.0
DYD2_k127_1377025_16 Bacterial regulatory proteins, tetR family - - - 0.00000000000000000002178 99.0
DYD2_k127_1377025_17 CAAX protease self-immunity K07052 - - 0.0000003023 62.0
DYD2_k127_1377025_2 Catalyzes the formation of the alpha-1,6-glucosidic linkages in glycogen by scission of a 1,4-alpha-linked oligosaccharide from growing alpha-1,4-glucan chains and the subsequent attachment of the oligosaccharide to the alpha-1,6 position K00700 - 2.4.1.18 3.196e-284 891.0
DYD2_k127_1377025_3 Maltogenic Amylase, C-terminal domain K05343 - 3.2.1.1,5.4.99.16 1.355e-269 842.0
DYD2_k127_1377025_4 Domain of unknown function (DUF3459) K01236 - 3.2.1.141 8.15e-234 743.0
DYD2_k127_1377025_5 4-alpha-glucanotransferase K00700,K00705,K02438,K06044 - 2.4.1.18,2.4.1.25,3.2.1.196,5.4.99.15 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001784 605.0
DYD2_k127_1377025_6 efflux transmembrane transporter activity K02004 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001447 596.0
DYD2_k127_1377025_7 Domain of unknown function (DUF3416) K16147 - 2.4.99.16 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000691 586.0
DYD2_k127_1377025_8 PFAM Glucose Sorbosone dehydrogenase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001126 384.0
DYD2_k127_1377025_9 PFAM AIR synthase related protein K01933 - 6.3.3.1 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002401 337.0
DYD2_k127_1443023_0 acid phosphatase activity K01077 - 3.1.3.1 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001472 354.0
DYD2_k127_1443023_1 Catalyzes the condensation of pantoate with beta-alanine in an ATP-dependent reaction via a pantoyl-adenylate intermediate K01918 - 6.3.2.1 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000001542 287.0
DYD2_k127_1443023_10 TadE-like protein - - - 0.00008728 52.0
DYD2_k127_1443023_11 TadE-like protein - - - 0.0005911 49.0
DYD2_k127_1443023_2 Pregnancy-associated plasma protein-A - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000008351 285.0
DYD2_k127_1443023_3 Domain present in PSD-95, Dlg, and ZO-1/2. - - - 0.000000000000000000000000000000000000000000000000000000000000000007592 235.0
DYD2_k127_1443023_4 Domain of unknown function (DUF2520) - - - 0.0000000000000000000000000000000000000003206 160.0
DYD2_k127_1443023_5 Zn-finger in ubiquitin-hydrolases and other protein - - - 0.000000000000000000000000000000000005791 139.0
DYD2_k127_1443023_6 regulation of RNA biosynthetic process - - - 0.0000000000000000000000005833 113.0
DYD2_k127_1443023_7 PFAM TadE family protein - - - 0.000000000000000000005656 108.0
DYD2_k127_1443023_8 cellulase activity K01218 - 3.2.1.78 0.00000000000000001007 98.0
DYD2_k127_1443023_9 Part of the outer membrane protein assembly complex, which is involved in assembly and insertion of beta-barrel proteins into the outer membrane - - - 0.0000000009636 72.0
DYD2_k127_1456394_0 Aconitase C-terminal domain K01681 - 4.2.1.3 0.000000000000000000000000000000000000000000000000000000000002864 213.0
DYD2_k127_1456394_1 helix_turn_helix, Lux Regulon - - - 0.0000000000000000000000000000000001712 154.0
DYD2_k127_1456394_2 PFAM regulatory protein LuxR - - - 0.0000000000000000000000000002108 130.0
DYD2_k127_1456394_3 Flavin containing amine oxidoreductase K06954 - - 0.000000000001838 78.0
DYD2_k127_1456394_4 PFAM 4Fe-4S K05337 - - 0.000469 52.0
DYD2_k127_1476006_0 Belongs to the class-I aminoacyl-tRNA synthetase family K01869 - 6.1.1.4 6.66e-308 968.0
DYD2_k127_1476006_1 Catalyzes the phosphorylation of pyruvate to phosphoenolpyruvate K01007 - 2.7.9.2 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001405 521.0
DYD2_k127_1476006_10 Polyketide cyclase / dehydrase and lipid transport - - - 0.000006202 54.0
DYD2_k127_1476006_11 Domain of unknown function (DUF4399) - - - 0.00003483 55.0
DYD2_k127_1476006_2 Catalyzes the phosphorylation of pyruvate to phosphoenolpyruvate K01007 - 2.7.9.2 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007619 491.0
DYD2_k127_1476006_3 Belongs to the bacterial solute-binding protein 3 family K02030,K09969,K10039 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008764 408.0
DYD2_k127_1476006_4 Transcriptional regulator K21744 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002679 308.0
DYD2_k127_1476006_5 - - - - 0.000000000000000000000000000000000000000000000000000000000000004202 226.0
DYD2_k127_1476006_6 Methyltransferase domain - - - 0.00000000000000000000000000000002462 136.0
DYD2_k127_1476006_7 PFAM GCN5-related N-acetyltransferase - - - 0.000000000000000000002161 102.0
DYD2_k127_1476006_8 Bacterial regulatory proteins, tetR family - - - 0.0000000005937 68.0
DYD2_k127_1476006_9 HupF/HypC family K04653 - - 0.000000002364 64.0
DYD2_k127_1492391_0 Produces ATP from ADP in the presence of a proton gradient across the membrane. The catalytic sites are hosted primarily by the beta subunits K02112 GO:0005575,GO:0005576,GO:0005618,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005886,GO:0008150,GO:0016020,GO:0030312,GO:0040007,GO:0044424,GO:0044444,GO:0044464,GO:0071944 3.6.3.14 2.084e-222 704.0
DYD2_k127_1492391_1 Produces ATP from ADP in the presence of a proton gradient across the membrane. The alpha chain is a regulatory subunit K02111 GO:0003674,GO:0003824,GO:0005215,GO:0005575,GO:0005618,GO:0005622,GO:0005623,GO:0005886,GO:0006139,GO:0006163,GO:0006164,GO:0006725,GO:0006753,GO:0006754,GO:0006793,GO:0006796,GO:0006807,GO:0006810,GO:0006811,GO:0006812,GO:0008150,GO:0008152,GO:0008324,GO:0009058,GO:0009117,GO:0009123,GO:0009124,GO:0009126,GO:0009127,GO:0009141,GO:0009142,GO:0009144,GO:0009145,GO:0009150,GO:0009152,GO:0009156,GO:0009161,GO:0009165,GO:0009167,GO:0009168,GO:0009199,GO:0009201,GO:0009205,GO:0009206,GO:0009259,GO:0009260,GO:0009987,GO:0015075,GO:0015077,GO:0015078,GO:0015318,GO:0015399,GO:0015405,GO:0015672,GO:0015985,GO:0015986,GO:0016020,GO:0016462,GO:0016469,GO:0016787,GO:0016817,GO:0016818,GO:0016887,GO:0017111,GO:0017144,GO:0018130,GO:0019438,GO:0019637,GO:0019693,GO:0019829,GO:0022804,GO:0022853,GO:0022857,GO:0022890,GO:0030312,GO:0032991,GO:0033178,GO:0034220,GO:0034641,GO:0034654,GO:0040007,GO:0042623,GO:0042625,GO:0042626,GO:0043492,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0044424,GO:0044425,GO:0044459,GO:0044464,GO:0044769,GO:0045259,GO:0045260,GO:0045261,GO:0045262,GO:0046034,GO:0046390,GO:0046483,GO:0046933,GO:0051179,GO:0051234,GO:0055085,GO:0055086,GO:0071704,GO:0071944,GO:0072521,GO:0072522,GO:0090407,GO:0090662,GO:0098655,GO:0098660,GO:0098662,GO:0098796,GO:0098797,GO:0099131,GO:0099132,GO:1901135,GO:1901137,GO:1901293,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576,GO:1902600 3.6.3.14 3.43e-200 634.0
DYD2_k127_1492391_10 Domain of unknown function (DUF1905) - - - 0.00000000000000000002059 98.0
DYD2_k127_1492391_11 Conserved repeat domain - - - 0.00000007983 64.0
DYD2_k127_1492391_12 Transcriptional regulator - - - 0.0003431 49.0
DYD2_k127_1492391_2 Cell division protein FtsA K03569 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000104 441.0
DYD2_k127_1492391_3 Cell wall formation. Adds enolpyruvyl to UDP-N- acetylglucosamine K00790 - 2.5.1.7 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009574 362.0
DYD2_k127_1492391_4 Produces ATP from ADP in the presence of a proton gradient across the membrane. The gamma chain is believed to be important in regulating ATPase activity and the flow of protons through the CF(0) complex K02115 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000001387 283.0
DYD2_k127_1492391_5 Belongs to the FPG family K05522 - 4.2.99.18 0.000000000000000000000000000000000000000000000000000000000000000000009941 244.0
DYD2_k127_1492391_6 PFAM conserved K07027 - - 0.0000000000000000000000000000000000000000000000000000000000000000002109 244.0
DYD2_k127_1492391_7 Endonuclease IV plays a role in DNA repair. It cleaves phosphodiester bonds at apurinic or apyrimidinic sites (AP sites) to produce new 5'-ends that are base-free deoxyribose 5-phosphate residues. It preferentially attacks modified AP sites created by bleomycin and neocarzinostatin K01151 GO:0003674,GO:0003824,GO:0003906,GO:0006139,GO:0006259,GO:0006281,GO:0006284,GO:0006725,GO:0006807,GO:0006950,GO:0006974,GO:0008081,GO:0008150,GO:0008152,GO:0009987,GO:0016787,GO:0016788,GO:0033554,GO:0034641,GO:0042578,GO:0043170,GO:0044237,GO:0044238,GO:0044260,GO:0046483,GO:0050896,GO:0051716,GO:0071704,GO:0090304,GO:0140097,GO:1901360 3.1.21.2 0.00000000000000000000000000000000000000000000000000000000002228 220.0
DYD2_k127_1492391_8 PHP domain protein K07053 - 3.1.3.97 0.00000000000000000000000000000000000000004465 166.0
DYD2_k127_1492391_9 Produces ATP from ADP in the presence of a proton gradient across the membrane K02114 - - 0.000000000000000000000000000000000002463 141.0
DYD2_k127_1492594_0 Glycosyl hydrolases family 38 N-terminal domain K01191,K15524 - 3.2.1.170,3.2.1.24 8.097e-226 729.0
DYD2_k127_1492594_1 TIGRFAM Acetolactate synthase, large subunit, biosynthetic K01652 - 2.2.1.6 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002415 570.0
DYD2_k127_1492594_2 Oxidoreductase family, C-terminal alpha/beta domain K00010 - 1.1.1.18,1.1.1.369 0.00000000000000000000000000000000000000000000000000000000000000000000009191 254.0
DYD2_k127_1492594_3 involved in inositol metabolism K03337 - 5.3.1.30 0.000000000000000000000000000000000000000000000000000000487 206.0
DYD2_k127_1492594_4 Inosose dehydratase K03335 - 4.2.1.44 0.00000000000000000000000000000000000000000000006204 183.0
DYD2_k127_1508015_0 SMART Metal-dependent phosphohydrolase, HD region K01129 - 3.1.5.1 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004657 419.0
DYD2_k127_1508015_1 Receptor family ligand binding region K01999 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007483 375.0
DYD2_k127_1508015_2 NYN domain - - - 0.00000000000000000000000000000000005725 152.0
DYD2_k127_1508015_3 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD - - - 0.00000000000000000000000000000001355 135.0
DYD2_k127_1508015_4 Psort location Cytoplasmic, score - - - 0.00000000000000000000008249 111.0
DYD2_k127_1508015_5 Acylphosphatase K01512 - 3.6.1.7 0.00000000000000001278 90.0
DYD2_k127_1508015_6 Facilitates transcription termination by a mechanism that involves Rho binding to the nascent RNA, activation of Rho's RNA-dependent ATPase activity, and release of the mRNA from the DNA template - - - 0.000000000476 63.0
DYD2_k127_1529551_0 DEAD DEAH box helicase domain protein - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006951 527.0
DYD2_k127_1529551_1 Radical SAM superfamily K06937 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005268 464.0
DYD2_k127_1529551_2 Transcriptional regulator - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001765 469.0
DYD2_k127_1529551_3 PFAM regulatory protein LuxR - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003575 449.0
DYD2_k127_1529551_4 Elongation factor G C-terminus K06207 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007287 346.0
DYD2_k127_1529551_5 lipoprotein biosynthetic process K13292 - - 0.000000000000000000000000000000000000000000000000000000001045 210.0
DYD2_k127_1529551_6 GYD domain - - - 0.0000000000000000000000000005277 117.0
DYD2_k127_1529551_7 translation initiation factor activity K06996 - - 0.00000000000000000000239 102.0
DYD2_k127_1529551_8 Alpha beta hydrolase - - - 0.000000000000004191 76.0
DYD2_k127_1551124_0 COG COG0745 Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain Signal transduction mechanisms Transcription - - - 0.00000000000000000000000000000000000000000000000000000000000007459 224.0
DYD2_k127_1551124_1 histidine kinase-, DNA gyrase B - - - 0.0000000000000000000000000000000000000000000001349 186.0
DYD2_k127_1551124_2 This is one of the proteins that binds to the 5S RNA in the ribosome where it forms part of the central protuberance K02897 - - 0.00000000000000000000000000001448 133.0
DYD2_k127_1551124_3 Uncharacterized protein conserved in bacteria (DUF2334) K06986 - - 0.0000000000000000000000000007172 124.0
DYD2_k127_1571880_0 PFAM Glycosyl transferase family 2 - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000747 327.0
DYD2_k127_1571880_1 COG0438 Glycosyltransferase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000001031 277.0
DYD2_k127_1571880_2 Cyclic nucleotide-monophosphate binding domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000005626 264.0
DYD2_k127_169302_0 Transcriptional regulatory protein, C terminal K02483 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000003174 258.0
DYD2_k127_169302_1 Belongs to the MtfA family K09933 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000006903 270.0
DYD2_k127_169302_2 RmlD substrate binding domain - - - 0.0000000000000000000000000000000000000000000000000000000000009459 217.0
DYD2_k127_169302_3 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain K07642 - 2.7.13.3 0.0000000000000000000000000000000000000000000000000000000001633 217.0
DYD2_k127_169302_4 Hydrolase Family 16 - - - 0.00000000000000000000000000000000000000000000000000000005024 206.0
DYD2_k127_169302_5 Cyclic nucleotide-monophosphate binding domain - - - 0.000000000000000000000000000000000000000001969 160.0
DYD2_k127_169302_6 PFAM Adenylyl cyclase class-3 4 guanylyl cyclase - - - 0.00000000000000000000000000000000000000003808 175.0
DYD2_k127_1717286_0 Penicillin amidase K01434 - 3.5.1.11 2.598e-224 722.0
DYD2_k127_1717286_1 Acyl-CoA dehydrogenase, C-terminal domain K16173 - 1.3.99.32 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005239 537.0
DYD2_k127_1717286_10 Rhomboid family K19225 - 3.4.21.105 0.00000000000000000000000000000000002642 150.0
DYD2_k127_1717286_11 Tachylectin - - - 0.00000000000000000000000000000004301 140.0
DYD2_k127_1717286_12 Ferredoxin - - - 0.0000000000000000000000003578 109.0
DYD2_k127_1717286_13 Helix-hairpin-helix class 2 (Pol1 family) motifs - - - 0.000000000000000000007153 94.0
DYD2_k127_1717286_14 - - - - 0.0000000000000000006149 91.0
DYD2_k127_1717286_15 cysteine-tRNA ligase activity - - - 0.000000000000004832 86.0
DYD2_k127_1717286_16 - - - - 0.000000001305 72.0
DYD2_k127_1717286_17 Helix-turn-helix domain - - - 0.000000002913 62.0
DYD2_k127_1717286_18 - - - - 0.00000911 57.0
DYD2_k127_1717286_2 Belongs to the ABC transporter superfamily - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002018 466.0
DYD2_k127_1717286_3 Belongs to the class-I aminoacyl-tRNA synthetase family K15526 - 6.3.1.13 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001744 394.0
DYD2_k127_1717286_4 Belongs to the ABC transporter superfamily K02032 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001126 355.0
DYD2_k127_1717286_5 PFAM peptidase S9 prolyl oligopeptidase active site domain protein - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002995 346.0
DYD2_k127_1717286_6 ABC-type dipeptide transport system, periplasmic component K02035 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000002041 307.0
DYD2_k127_1717286_7 PFAM binding-protein-dependent transport systems inner membrane component K02033 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000007938 282.0
DYD2_k127_1717286_8 Dienelactone hydrolase family K01061 - 3.1.1.45 0.00000000000000000000000000000000000000000000000000000000000001209 224.0
DYD2_k127_1717286_9 Iron permease FTR1 family K07243 - - 0.00000000000000000000000000000000000000000000000000000000000009648 224.0
DYD2_k127_1720154_0 Major Facilitator - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008481 338.0
DYD2_k127_1720154_1 Bacterial transcriptional repressor C-terminal - - - 0.0000000000000000000000000000000001161 141.0
DYD2_k127_1720154_2 NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be a menaquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient K00340,K05576 - 1.6.5.3 0.0000000000000000001425 100.0
DYD2_k127_1720154_3 Belongs to the complex I subunit 6 family K00339 - 1.6.5.3 0.000000000001275 75.0
DYD2_k127_1720154_4 NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient K00338 - 1.6.5.3 0.0000395 46.0
DYD2_k127_178796_0 Putative modulator of DNA gyrase K03568 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000621 511.0
DYD2_k127_178796_1 Belongs to the dCTP deaminase family K01494 GO:0003674,GO:0003824,GO:0004170,GO:0016462,GO:0016787,GO:0016810,GO:0016814,GO:0016817,GO:0016818,GO:0019239,GO:0033973,GO:0047429 3.5.4.13 0.000000000000000000000000000000000000000000000000000000000000000000000000000003175 266.0
DYD2_k127_178796_10 PFAM Major Facilitator Superfamily - - - 0.000000000000000000000000000000000006446 155.0
DYD2_k127_178796_11 Cytochrome c biogenesis protein K06196 - - 0.00000000000000000000000000000002916 138.0
DYD2_k127_178796_12 Protein of unknown function, DUF - - - 0.00000000000000000000000000001801 123.0
DYD2_k127_178796_13 Bacterial protein of unknown function (DUF881) - - - 0.00000000000000000000000001154 121.0
DYD2_k127_178796_14 Peptidase MA superfamily - - - 0.00000000000000000002002 106.0
DYD2_k127_178796_15 Bacterial protein of unknown function (DUF881) - GO:0005575,GO:0005576,GO:0005623,GO:0005886,GO:0005887,GO:0016020,GO:0016021,GO:0031224,GO:0031226,GO:0044425,GO:0044459,GO:0044464,GO:0071944 - 0.000000000000000008455 94.0
DYD2_k127_178796_16 Bacterial protein of unknown function (DUF951) - - - 0.00000000000000002816 86.0
DYD2_k127_178796_17 Transcriptional regulator K10914 - - 0.0000000000000003013 85.0
DYD2_k127_178796_18 PFAM blue (type 1) copper domain protein - - - 0.000000000000001536 85.0
DYD2_k127_178796_19 Has a glutathione-disulfide oxidoreductase activity in the presence of NADPH and glutathione reductase. Reduces low molecular weight disulfides and proteins - - - 0.000000000433 63.0
DYD2_k127_178796_2 metallopeptidase activity - - - 0.0000000000000000000000000000000000000000000000000000000000000000000003763 258.0
DYD2_k127_178796_20 Cupredoxin-like domain - - - 0.0009868 47.0
DYD2_k127_178796_3 water channel activity K02440,K06188,K09874 - - 0.0000000000000000000000000000000000000000000000000000000000006839 220.0
DYD2_k127_178796_4 Bacterial extracellular solute-binding proteins, family 5 Middle K02035 - - 0.0000000000000000000000000000000000000000000000000000582 207.0
DYD2_k127_178796_5 Amidohydrolase family - - - 0.00000000000000000000000000000000000000000000000001988 201.0
DYD2_k127_178796_6 Negatively regulates transcription of bacterial ribonucleotide reductase nrd genes and operons by binding to NrdR- boxes K07738 - - 0.0000000000000000000000000000000000000000000239 166.0
DYD2_k127_178796_7 Glycosyl transferase, family 2 K19003 GO:0000287,GO:0003674,GO:0003824,GO:0005488,GO:0006629,GO:0006643,GO:0008150,GO:0008152,GO:0008610,GO:0009058,GO:0009987,GO:0016740,GO:0016757,GO:0016758,GO:0043167,GO:0043169,GO:0044237,GO:0044238,GO:0044249,GO:0044255,GO:0046467,GO:0046872,GO:0071704,GO:1901576 2.4.1.336 0.000000000000000000000000000000000000000007312 171.0
DYD2_k127_178796_8 Metallo-beta-lactamase superfamily - - - 0.00000000000000000000000000000000000000002135 171.0
DYD2_k127_178796_9 domain, Protein - - - 0.0000000000000000000000000000000000000004157 168.0
DYD2_k127_1805890_0 Belongs to the glycosyl hydrolase 13 family - - - 1.782e-274 884.0
DYD2_k127_1805890_1 Aldehyde dehydrogenase family K00294 - 1.2.1.88 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005888 564.0
DYD2_k127_1805890_10 Catalyzes the conversion of dihydroorotate to orotate with quinone as electron acceptor K00254 - 1.3.5.2 0.000000000000000000000000000000000000000000000000000000000000000000000000000000002307 288.0
DYD2_k127_1805890_11 PFAM Binding-protein-dependent transport system inner membrane component K02025,K15771 - - 0.0000000000000000000000000000000000000000000000000000000000000009503 222.0
DYD2_k127_1805890_12 Two component transcriptional regulator, LuxR family - - - 0.0000000000000000000000000000000000000000000000000000000000004141 226.0
DYD2_k127_1805890_13 Integral membrane sensor signal transduction histidine kinase - - - 0.00000000000000000000000000000000000000000000000000000002149 216.0
DYD2_k127_1805890_14 Polysaccharide deacetylase - - - 0.00000000000000000002118 93.0
DYD2_k127_1805890_15 Cyclic nucleotide-monophosphate binding domain - - - 0.0000000000000000407 87.0
DYD2_k127_1805890_16 ubiE/COQ5 methyltransferase family - - - 0.0000000000001041 79.0
DYD2_k127_1805890_17 spore germination K03605 - - 0.0000000129 68.0
DYD2_k127_1805890_2 CobW/HypB/UreG, nucleotide-binding domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002029 530.0
DYD2_k127_1805890_3 4Fe-4S dicluster domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003529 526.0
DYD2_k127_1805890_4 Alpha amylase, catalytic domain K01208 - 3.2.1.133,3.2.1.135,3.2.1.54 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001679 509.0
DYD2_k127_1805890_5 Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family K00596,K00823 - 2.6.1.19,4.1.1.64 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001286 475.0
DYD2_k127_1805890_6 Nickel-dependent hydrogenase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002694 446.0
DYD2_k127_1805890_7 PFAM Binding-protein-dependent transport system inner membrane component K15772 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004326 342.0
DYD2_k127_1805890_8 NADH ubiquinone oxidoreductase, 20 Kd subunit K14128 - 1.8.98.5 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000167 299.0
DYD2_k127_1805890_9 PFAM Mannosyl oligosaccharide glucosidase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000001422 306.0
DYD2_k127_1849146_0 Protein of unknown function (DUF1015) - - - 0.0000000000000000000000000000000000000000000000000000000000009567 229.0
DYD2_k127_1849146_1 Belongs to the tannase family - - - 0.0000000000000000000000000000000000000000003752 161.0
DYD2_k127_1849146_2 PhoQ Sensor - - - 0.00000000000000000000000000000000000000004854 173.0
DYD2_k127_1849146_3 Alpha beta hydrolase - - - 0.0000000000000000000000000001662 125.0
DYD2_k127_1985364_0 Prevents misfolding and promotes the refolding and proper assembly of unfolded polypeptides generated under stress conditions K04077 GO:0003674,GO:0003676,GO:0003677,GO:0003697,GO:0005488,GO:0005515,GO:0005575,GO:0005618,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005886,GO:0006139,GO:0006259,GO:0006457,GO:0006458,GO:0006725,GO:0006807,GO:0006950,GO:0007154,GO:0008150,GO:0008152,GO:0009266,GO:0009295,GO:0009408,GO:0009605,GO:0009628,GO:0009987,GO:0009991,GO:0016020,GO:0016043,GO:0016465,GO:0030312,GO:0031668,GO:0032991,GO:0033554,GO:0034641,GO:0040007,GO:0042026,GO:0042262,GO:0043170,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043388,GO:0043590,GO:0044093,GO:0044183,GO:0044237,GO:0044238,GO:0044260,GO:0044424,GO:0044444,GO:0044445,GO:0044464,GO:0046483,GO:0050896,GO:0051082,GO:0051098,GO:0051099,GO:0051101,GO:0051716,GO:0061077,GO:0065007,GO:0065009,GO:0071496,GO:0071704,GO:0071840,GO:0071944,GO:0090143,GO:0090304,GO:0097159,GO:0101031,GO:1901360,GO:1901363,GO:1990220,GO:2000677,GO:2000679 - 3.969e-213 676.0
DYD2_k127_1985364_1 TIGRFAM glutamate synthase (NADPH), homotetrameric K00266 - 1.4.1.13,1.4.1.14 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001226 615.0
DYD2_k127_1985364_10 Copper binding proteins, plastocyanin/azurin family - - - 0.000000000001237 74.0
DYD2_k127_1985364_2 Is required not only for elongation of protein synthesis but also for the initiation of all mRNA translation through initiator tRNA(fMet) aminoacylation K01874 - 6.1.1.10 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003984 436.0
DYD2_k127_1985364_3 oxidoreductase FAD NAD(P)-binding domain protein K00528 - 1.18.1.2,1.19.1.1 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004795 308.0
DYD2_k127_1985364_4 TIGRFAM hydrolase, TatD family K03424 - - 0.000000000000000000000000000000000000000000000000000005166 204.0
DYD2_k127_1985364_5 Binds to Cpn60 in the presence of Mg-ATP and suppresses the ATPase activity of the latter K04078 - - 0.0000000000000000000000000000000000001872 143.0
DYD2_k127_1985364_6 Protein of unknown function (DUF3048) C-terminal domain - - - 0.00000000000000000000000000000000001364 149.0
DYD2_k127_1985364_7 Oxidoreductase NAD-binding domain K00528 - 1.18.1.2,1.19.1.1 0.00000000000000000000000000000000001493 152.0
DYD2_k127_1985364_8 ATP-dependent DNA helicase K03657 - 3.6.4.12 0.00000000000000003218 90.0
DYD2_k127_1985364_9 YCII-related domain - - - 0.0000000000001072 78.0
DYD2_k127_1994845_0 it binds specifically double-stranded DNA at a 9 bp consensus (dnaA box) 5'-TTATC CA A CA A-3'. DnaA binds to ATP and to acidic phospholipids K02313 GO:0003674,GO:0003676,GO:0003677,GO:0003688,GO:0003690,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005886,GO:0006139,GO:0006259,GO:0006260,GO:0006261,GO:0006270,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0016020,GO:0034641,GO:0034645,GO:0043170,GO:0043565,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044424,GO:0044464,GO:0046483,GO:0071704,GO:0071944,GO:0090304,GO:0097159,GO:1901360,GO:1901363,GO:1901576,GO:1990837 - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002519 411.0
DYD2_k127_1994845_1 Confers DNA tethering and processivity to DNA polymerases and other proteins. Acts as a clamp, forming a ring around DNA (a reaction catalyzed by the clamp-loading complex) which diffuses in an ATP-independent manner freely and bidirectionally along dsDNA. Initially characterized for its ability to contact the catalytic subunit of DNA polymerase III (Pol III), a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria K02338 - 2.7.7.7 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001648 351.0
DYD2_k127_1994845_10 membrane - - - 0.0000008848 60.0
DYD2_k127_1994845_2 it is required for DNA replication and normal SOS inducibility. RecF binds preferentially to single-stranded, linear DNA. It also seems to bind ATP K03629 GO:0000731,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005886,GO:0006139,GO:0006259,GO:0006281,GO:0006302,GO:0006725,GO:0006807,GO:0006950,GO:0006974,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0016020,GO:0018130,GO:0019438,GO:0033554,GO:0034641,GO:0034645,GO:0034654,GO:0043170,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044271,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0050896,GO:0051716,GO:0071704,GO:0071897,GO:0071944,GO:0090304,GO:1901360,GO:1901362,GO:1901576 - 0.000000000000000000000000000000000000000000000000000000000001514 229.0
DYD2_k127_1994845_3 Glycosyltransferase like family 2 - - - 0.0000000000000000000000000000000000000000000000000000008652 205.0
DYD2_k127_1994845_4 Glycosyl transferase K00728 - 2.4.1.109 0.000000000000000000000000000000000000000006024 181.0
DYD2_k127_1994845_5 Bifunctional nuclease K08999 - - 0.0000000000000000000000000000000000002367 147.0
DYD2_k127_1994845_6 4-amino-4-deoxy-L-arabinose transferase activity - - - 0.0000000000000000000000000000003954 143.0
DYD2_k127_1994845_7 One of the essential components for the initiation of protein synthesis. Stabilizes the binding of IF-2 and IF-3 on the 30S subunit to which N-formylmethionyl-tRNA(fMet) subsequently binds. Helps modulate mRNA selection, yielding the 30S pre- initiation complex (PIC). Upon addition of the 50S ribosomal subunit IF-1, IF-2 and IF-3 are released leaving the mature 70S translation initation complex K02518 GO:0003674,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0043021,GO:0043022,GO:0044424,GO:0044444,GO:0044464,GO:0044877 - 0.000000000000000000000001142 104.0
DYD2_k127_1994845_8 Phage shock protein C, PspC K03973 - - 0.000000000000002558 86.0
DYD2_k127_1994845_9 protein serine/threonine phosphatase activity - - - 0.0000005837 63.0
DYD2_k127_2044244_0 Bacterial-like globin K06886 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006335 487.0
DYD2_k127_2044244_1 Belongs to the MenA family. Type 1 subfamily - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001883 330.0
DYD2_k127_2044244_2 guanylate cyclase catalytic domain K01768 - 4.6.1.1 0.000000000000000000000000000000000000000000000006254 184.0
DYD2_k127_2044244_3 guanylate cyclase catalytic domain K01768 - 4.6.1.1 0.00000000000000000000000000000000000000000000002408 180.0
DYD2_k127_2044244_4 hydrolase activity, acting on ester bonds - - - 0.00000000000000000000001267 115.0
DYD2_k127_2044244_5 - - - - 0.000000000000000000002984 102.0
DYD2_k127_2104864_0 PFAM Transketolase central region K00167 - 1.2.4.4 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001818 425.0
DYD2_k127_2104864_1 e3 binding domain K00627,K09699 - 2.3.1.12,2.3.1.168 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001521 378.0
DYD2_k127_2104864_2 Catalyzes the radical-mediated insertion of two sulfur atoms into the C-6 and C-8 positions of the octanoyl moiety bound to the lipoyl domains of lipoate-dependent enzymes, thereby converting the octanoylated domains into lipoylated derivatives K03644 GO:0003674,GO:0003824,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006082,GO:0006464,GO:0006629,GO:0006631,GO:0006633,GO:0006732,GO:0006790,GO:0006807,GO:0008150,GO:0008152,GO:0008610,GO:0009058,GO:0009106,GO:0009107,GO:0009108,GO:0009249,GO:0009987,GO:0010467,GO:0016053,GO:0016740,GO:0016782,GO:0016783,GO:0016992,GO:0018065,GO:0018130,GO:0018193,GO:0018205,GO:0019538,GO:0019752,GO:0032787,GO:0036211,GO:0043170,GO:0043412,GO:0043436,GO:0044237,GO:0044238,GO:0044249,GO:0044255,GO:0044260,GO:0044267,GO:0044272,GO:0044281,GO:0044283,GO:0044424,GO:0044464,GO:0046394,GO:0046483,GO:0051186,GO:0051188,GO:0051604,GO:0070283,GO:0071704,GO:0072330,GO:1901360,GO:1901362,GO:1901564,GO:1901576 2.8.1.8 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000003321 291.0
DYD2_k127_2104864_3 DNA alkylation repair enzyme - - - 0.000000000000000000000000000000000000000000000000000000000000000000001994 243.0
DYD2_k127_2104864_4 Dehydrogenase E1 component K00166 - 1.2.4.4 0.000000000000000000000000000000000008266 140.0
DYD2_k127_2126727_0 The UvrABC repair system catalyzes the recognition and processing of DNA lesions. UvrC both incises the 5' and 3' sides of the lesion. The N-terminal half is responsible for the 3' incision and the C-terminal half is responsible for the 5' incision K03703 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001069 554.0
DYD2_k127_2126727_1 Part of the Sec protein translocase complex. Interacts with the SecYEG preprotein conducting channel. SecDF uses the proton motive force (PMF) to complete protein translocation after the ATP-dependent function of SecA K03072 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000434 278.0
DYD2_k127_2126727_2 PFAM metal-dependent phosphohydrolase, HD sub domain - - - 0.0000000000000000000000000000000000000000000000000008563 189.0
DYD2_k127_2126727_3 DNA helicase K03657 - 3.6.4.12 0.00000000000000000000000000000000000000000000001119 191.0
DYD2_k127_2126727_4 TRANSCRIPTIONal - - - 0.0000000000000000000000000000000000000007437 171.0
DYD2_k127_2126727_5 Part of the Sec protein translocase complex. Interacts with the SecYEG preprotein conducting channel. SecDF uses the proton motive force (PMF) to complete protein translocation after the ATP-dependent function of SecA K03074 - - 0.000000000000000000000000000000000000001146 158.0
DYD2_k127_2126727_6 Methyltransferase domain K07003 - - 0.000000000000000000000000000002328 132.0
DYD2_k127_2126727_7 The UvrABC repair system catalyzes the recognition and processing of DNA lesions. UvrA is an ATPase and a DNA-binding protein. A damage recognition complex composed of 2 UvrA and 2 UvrB subunits scans DNA for abnormalities. When the presence of a lesion has been verified by UvrB, the UvrA molecules dissociate K03701 - - 0.0000002356 53.0
DYD2_k127_2147578_0 Catalyzes the NADP-dependent rearrangement and reduction of 1-deoxy-D-xylulose-5-phosphate (DXP) to 2-C-methyl-D-erythritol 4-phosphate (MEP) K00099 - 1.1.1.267 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006521 341.0
DYD2_k127_2147578_1 Catalyzes the reversible phosphorylation of UMP to UDP K09903 - 2.7.4.22 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001432 318.0
DYD2_k127_2147578_2 Belongs to the universal ribosomal protein uS2 family K02967 GO:0000028,GO:0003674,GO:0003735,GO:0005198,GO:0005488,GO:0005575,GO:0005618,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0005886,GO:0006412,GO:0006518,GO:0006807,GO:0006996,GO:0008150,GO:0008152,GO:0008270,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0015935,GO:0016020,GO:0016043,GO:0019538,GO:0022607,GO:0022613,GO:0022618,GO:0022626,GO:0022627,GO:0030312,GO:0032991,GO:0034622,GO:0034641,GO:0034645,GO:0040007,GO:0042254,GO:0042255,GO:0042274,GO:0043043,GO:0043167,GO:0043169,GO:0043170,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043603,GO:0043604,GO:0043933,GO:0044085,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:0046872,GO:0046914,GO:0065003,GO:0070925,GO:0071704,GO:0071826,GO:0071840,GO:0071944,GO:1901564,GO:1901566,GO:1901576,GO:1990904 - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003361 309.0
DYD2_k127_2147578_3 Catalyzes the condensation of isopentenyl diphosphate (IPP) with allylic pyrophosphates generating different type of terpenoids K00806 - 2.5.1.31 0.000000000000000000000000000000000000000000000000000000000000000000000007511 249.0
DYD2_k127_2147578_4 Associates with the EF-Tu.GDP complex and induces the exchange of GDP to GTP. It remains bound to the aminoacyl-tRNA.EF- Tu.GTP complex up to the GTP hydrolysis stage on the ribosome K02357 - - 0.0000000000000000000000000000000000000000000000000000000000000000005162 235.0
DYD2_k127_2147578_5 SMART PDZ DHR GLGF domain protein K11749 - - 0.0000000000000000000000000000000000000000000000000000000000002641 229.0
DYD2_k127_2147578_6 Responsible for the release of ribosomes from messenger RNA at the termination of protein biosynthesis. May increase the efficiency of translation by recycling ribosomes from one round of translation to another K02838 - - 0.0000000000000000000000000000000000000000000000000000000007969 206.0
DYD2_k127_2147578_7 Cytidylyltransferase family K00981 - 2.7.7.41 0.0000000000000000000000000000001434 139.0
DYD2_k127_2147578_8 Lysin motif - - - 0.00000000000000006777 90.0
DYD2_k127_2148663_0 Methylmalonyl-CoA mutase K01848 - 5.4.99.2 6.391e-200 636.0
DYD2_k127_2148663_1 Biotin carboxylase C-terminal domain K01941,K01961 - 6.3.4.14,6.3.4.6,6.4.1.2 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001447 447.0
DYD2_k127_2148663_2 Succinyl-CoA synthetase functions in the citric acid cycle (TCA), coupling the hydrolysis of succinyl-CoA to the synthesis of either ATP or GTP and thus represents the only step of substrate-level phosphorylation in the TCA. The alpha subunit of the enzyme binds the substrates coenzyme A and phosphate, while succinate binding and nucleotide specificity is provided by the beta subunit K01902 - 6.2.1.5 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009681 397.0
DYD2_k127_2148663_3 Succinyl-CoA synthetase functions in the citric acid cycle (TCA), coupling the hydrolysis of succinyl-CoA to the synthesis of either ATP or GTP and thus represents the only step of substrate-level phosphorylation in the TCA. The beta subunit provides nucleotide specificity of the enzyme and binds the substrate succinate, while the binding sites for coenzyme A and phosphate are found in the alpha subunit K01903 - 6.2.1.5 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000007008 287.0
DYD2_k127_2148663_4 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily K05606 - 5.1.99.1 0.000000000000000000000002581 111.0
DYD2_k127_2148663_5 Acetyltransferase (GNAT) domain - - - 0.000000000000000000000007786 109.0
DYD2_k127_2148663_6 Carboxyl transferase domain K01966 - 2.1.3.15,6.4.1.3 0.0000000000000005903 78.0
DYD2_k127_2148663_7 Biotin-requiring enzyme - - - 0.000000000592 67.0
DYD2_k127_2162690_0 Branched-chain amino acid transport system / permease component K01998 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002057 428.0
DYD2_k127_2162690_1 Belongs to the binding-protein-dependent transport system permease family K01997 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008509 359.0
DYD2_k127_2162690_10 TrkA-N domain K03499,K10716 - - 0.00000000000000000000000000000000001466 144.0
DYD2_k127_2162690_11 Psort location Cytoplasmic, score K00760 - 2.4.2.8 0.00000000000000000000000000000000001638 139.0
DYD2_k127_2162690_12 Universal stress protein family - - - 0.000000000000000001176 92.0
DYD2_k127_2162690_13 Belongs to the small heat shock protein (HSP20) family K13993 - - 0.000000000000000002567 87.0
DYD2_k127_2162690_2 Branched-chain amino acid ATP-binding cassette transporter K01995,K01998 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002787 344.0
DYD2_k127_2162690_3 PFAM ATPase family associated with various cellular activities (AAA) K03924 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000582 325.0
DYD2_k127_2162690_4 ABC transporter K01996 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000002093 291.0
DYD2_k127_2162690_5 Belongs to the purine pyrimidine phosphoribosyltransferase family K00760 - 2.4.2.8 0.000000000000000000000000000000000000000000000000000000000000000004228 230.0
DYD2_k127_2162690_6 TrkA-C domain K03499 - - 0.00000000000000000000000000000000000000000000000000000000000000003862 229.0
DYD2_k127_2162690_7 Calcineurin-like phosphoesterase superfamily domain - - - 0.000000000000000000000000000000000000000000000000000000000000000278 228.0
DYD2_k127_2162690_8 Protein of unknown function DUF58 - - - 0.000000000000000000000000000000000000000000002825 179.0
DYD2_k127_2162690_9 Specifically methylates the N7 position of a guanine in 16S rRNA K03501 - 2.1.1.170 0.000000000000000000000000000000000000000000003921 175.0
DYD2_k127_2163578_0 ATPase that binds to both the 70S ribosome and the 50S ribosomal subunit in a nucleotide-independent manner K06942 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007634 360.0
DYD2_k127_2163578_1 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain - - - 0.00000000000000000000000000000000000000000000000000000000000000002674 236.0
DYD2_k127_2163578_2 Calcineurin-like phosphoesterase - - - 0.000000000000000000000000000000000000000000000000000000003433 220.0
DYD2_k127_2163578_3 Zincin-like metallopeptidase - - - 0.000000000000000000000000000000000000001495 152.0
DYD2_k127_2163578_4 Exonuclease K07502 - - 0.000000000000000000000000009399 121.0
DYD2_k127_2164036_0 Reversibly catalyzes the transfer of the carbamoyl group from carbamoyl phosphate (CP) to the N(epsilon) atom of ornithine (ORN) to produce L-citrulline K00611 - 2.1.3.3 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001553 502.0
DYD2_k127_2164036_1 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain K00609 - 2.1.3.2 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001324 478.0
DYD2_k127_2164036_2 Pyridoxal-phosphate dependent enzyme - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001051 446.0
DYD2_k127_2164036_3 Amino acid kinase family K00926 - 2.7.2.2 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003279 375.0
DYD2_k127_2164036_4 Belongs to the cysteine synthase cystathionine beta- synthase family - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000004997 293.0
DYD2_k127_2164036_5 3-demethylubiquinone-9 3-O-methyltransferase activity K03428 - 2.1.1.11 0.000000000000000000000000000000002261 143.0
DYD2_k127_2164036_7 lipolytic acyl hydrolase (LAH) - - - 0.00001302 55.0
DYD2_k127_2168919_0 Belongs to the Glu Leu Phe Val dehydrogenases family K00261 - 1.4.1.3 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009725 578.0
DYD2_k127_2168919_1 DRTGG domain K06873 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000001236 293.0
DYD2_k127_2270187_0 Catalyzes the GTP-dependent ribosomal translocation step during translation elongation. During this step, the ribosome changes from the pre-translocational (PRE) to the post- translocational (POST) state as the newly formed A-site-bound peptidyl-tRNA and P-site-bound deacylated tRNA move to the P and E sites, respectively. Catalyzes the coordinated movement of the two tRNA molecules, the mRNA and conformational changes in the ribosome K02355 GO:0003674,GO:0003676,GO:0003723,GO:0003746,GO:0005488,GO:0005575,GO:0005618,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005886,GO:0006412,GO:0006414,GO:0006518,GO:0006807,GO:0008135,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0016020,GO:0019538,GO:0030312,GO:0034641,GO:0034645,GO:0040007,GO:0043043,GO:0043170,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044424,GO:0044444,GO:0044464,GO:0071704,GO:0071944,GO:0097159,GO:1901363,GO:1901564,GO:1901566,GO:1901576 - 9.312e-319 991.0
DYD2_k127_2270187_1 This protein promotes the GTP-dependent binding of aminoacyl-tRNA to the A-site of ribosomes during protein biosynthesis K02358 - - 7.579e-209 655.0
DYD2_k127_2270187_10 One of the primary rRNA binding proteins, it binds directly near the 3'-end of the 23S rRNA, where it nucleates assembly of the 50S subunit K02906 - - 0.000000000000000000000000000000000000000000000000000000000007343 214.0
DYD2_k127_2270187_11 Binds 23S rRNA and is also seen to make contacts with the A and possibly P site tRNAs K02878 - - 0.00000000000000000000000000000000000000000000000000000000004504 213.0
DYD2_k127_2270187_12 Interacts with and stabilizes bases of the 16S rRNA that are involved in tRNA selection in the A site and with the mRNA backbone. Located at the interface of the 30S and 50S subunits, it traverses the body of the 30S subunit contacting proteins on the other side and probably holding the rRNA structure together. The combined cluster of proteins S8, S12 and S17 appears to hold together the shoulder and platform of the 30S subunit K02950 GO:0003674,GO:0003735,GO:0005198,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005840,GO:0006412,GO:0006518,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0019538,GO:0032991,GO:0034641,GO:0034645,GO:0040007,GO:0043043,GO:0043170,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044424,GO:0044444,GO:0044464,GO:0071704,GO:1901564,GO:1901566,GO:1901576,GO:1990904 - 0.000000000000000000000000000000000000000000000000000001119 201.0
DYD2_k127_2270187_13 Forms part of the polypeptide exit tunnel K02926 - - 0.000000000000000000000000000000000000000000000000000005608 198.0
DYD2_k127_2270187_14 Binds to 23S rRNA. Forms part of two intersubunit bridges in the 70S ribosome K02874 - - 0.0000000000000000000000000000000000000000000000000007672 185.0
DYD2_k127_2270187_15 One of the primary rRNA binding proteins, it binds directly to 16S rRNA where it nucleates assembly of the head domain of the 30S subunit. Is located at the subunit interface close to the decoding center, probably blocks exit of the E-site tRNA K02992 GO:0000028,GO:0003674,GO:0003676,GO:0003723,GO:0003729,GO:0003735,GO:0005198,GO:0005488,GO:0005575,GO:0005618,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0005886,GO:0006412,GO:0006417,GO:0006518,GO:0006807,GO:0006996,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009889,GO:0009890,GO:0009892,GO:0009987,GO:0010467,GO:0010468,GO:0010556,GO:0010558,GO:0010605,GO:0010608,GO:0010629,GO:0015935,GO:0016020,GO:0016043,GO:0017148,GO:0019222,GO:0019538,GO:0019843,GO:0022607,GO:0022613,GO:0022618,GO:0022626,GO:0022627,GO:0030312,GO:0031323,GO:0031324,GO:0031326,GO:0031327,GO:0032268,GO:0032269,GO:0032991,GO:0034248,GO:0034249,GO:0034622,GO:0034641,GO:0034645,GO:0040007,GO:0042254,GO:0042255,GO:0042274,GO:0043043,GO:0043170,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043603,GO:0043604,GO:0043933,GO:0044085,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:0048519,GO:0048523,GO:0050789,GO:0050794,GO:0051171,GO:0051172,GO:0051246,GO:0051248,GO:0060255,GO:0065003,GO:0065007,GO:0070925,GO:0071704,GO:0071826,GO:0071840,GO:0071944,GO:0080090,GO:0097159,GO:1901363,GO:1901564,GO:1901566,GO:1901576,GO:1990904,GO:2000112,GO:2000113 - 0.00000000000000000000000000000000000000000000000008129 183.0
DYD2_k127_2270187_16 Part of the ABC transporter complex PotABCD involved in spermidine putrescine import. Responsible for energy coupling to the transport system K02010 - 3.6.3.30 0.00000000000000000000000000000000000000000000003412 176.0
DYD2_k127_2270187_17 One of the primary rRNA binding proteins, it binds directly to 16S rRNA central domain where it helps coordinate assembly of the platform of the 30S subunit K02994 - - 0.0000000000000000000000000000000000000000000008371 170.0
DYD2_k127_2270187_18 Involved in the binding of tRNA to the ribosomes K02946 GO:0003674,GO:0003735,GO:0005198,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005840,GO:0006412,GO:0006518,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0015935,GO:0019538,GO:0032991,GO:0034641,GO:0034645,GO:0043043,GO:0043170,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044446,GO:0044464,GO:0071704,GO:1901564,GO:1901566,GO:1901576,GO:1990904 - 0.000000000000000000000000000000000000000000002313 166.0
DYD2_k127_2270187_19 Protein S19 forms a complex with S13 that binds strongly to the 16S ribosomal RNA K02965 - - 0.00000000000000000000000000000000000000000002928 162.0
DYD2_k127_2270187_2 The central subunit of the protein translocation channel SecYEG. Consists of two halves formed by TMs 1-5 and 6-10. These two domains form a lateral gate at the front which open onto the bilayer between TMs 2 and 7, and are clamped together by SecE at the back. The channel is closed by both a pore ring composed of hydrophobic SecY resides and a short helix (helix 2A) on the extracellular side of the membrane which forms a plug. The plug probably moves laterally to allow the channel to open. The ring and the pore may move independently K03076 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001745 426.0
DYD2_k127_2270187_20 Binds to the 23S rRNA K02876 GO:0003674,GO:0003735,GO:0005198,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0015934,GO:0022625,GO:0022626,GO:0032991,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:1990904 - 0.000000000000000000000000000000000008494 148.0
DYD2_k127_2270187_21 The globular domain of the protein is located near the polypeptide exit tunnel on the outside of the subunit, while an extended beta-hairpin is found that lines the wall of the exit tunnel in the center of the 70S ribosome K02890 GO:0003674,GO:0003735,GO:0005198,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0015934,GO:0022625,GO:0022626,GO:0032991,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:1990904 - 0.0000000000000000000000000000000000914 136.0
DYD2_k127_2270187_22 This is one of the proteins that binds and probably mediates the attachment of the 5S RNA into the large ribosomal subunit, where it forms part of the central protuberance K02881 GO:0003674,GO:0003676,GO:0003723,GO:0003735,GO:0005198,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0006412,GO:0006518,GO:0006807,GO:0008097,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0015934,GO:0019538,GO:0019843,GO:0022625,GO:0022626,GO:0032991,GO:0034641,GO:0034645,GO:0040007,GO:0043043,GO:0043170,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:0071704,GO:0097159,GO:1901363,GO:1901564,GO:1901566,GO:1901576,GO:1990904 - 0.000000000000000000000000000000001199 132.0
DYD2_k127_2270187_23 One of the essential components for the initiation of protein synthesis. Stabilizes the binding of IF-2 and IF-3 on the 30S subunit to which N-formylmethionyl-tRNA(fMet) subsequently binds. Helps modulate mRNA selection, yielding the 30S pre- initiation complex (PIC). Upon addition of the 50S ribosomal subunit IF-1, IF-2 and IF-3 are released leaving the mature 70S translation initation complex K02518 - - 0.0000000000000000000000000000005055 122.0
DYD2_k127_2270187_24 One of the primary rRNA binding proteins, it binds specifically to the 5'-end of 16S ribosomal RNA K02961 - - 0.00000000000000000000000000032 115.0
DYD2_k127_2270187_25 One of the proteins that surrounds the polypeptide exit tunnel on the outside of the subunit K02895 - - 0.00000000000000000000000006321 113.0
DYD2_k127_2270187_26 Binds 16S rRNA, required for the assembly of 30S particles and may also be responsible for determining the conformation of the 16S rRNA at the A site K02954 - - 0.00000000000000000004347 92.0
DYD2_k127_2270187_27 One of the early assembly proteins it binds 23S rRNA. One of the proteins that surrounds the polypeptide exit tunnel on the outside of the ribosome. Forms the main docking site for trigger factor binding to the ribosome K02892 - - 0.0000000000000000002404 93.0
DYD2_k127_2270187_28 TIGRFAM ribosomal protein L30 K02907 - - 0.000000000349 65.0
DYD2_k127_2270187_29 structural constituent of ribosome K02904 - - 0.00000001143 59.0
DYD2_k127_2270187_3 One of the primary rRNA binding proteins. Required for association of the 30S and 50S subunits to form the 70S ribosome, for tRNA binding and peptide bond formation. It has been suggested to have peptidyltransferase activity K02886 GO:0000027,GO:0002181,GO:0003674,GO:0003676,GO:0003723,GO:0003735,GO:0005198,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0005886,GO:0006412,GO:0006518,GO:0006807,GO:0006996,GO:0008150,GO:0008152,GO:0008270,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0015934,GO:0016020,GO:0016043,GO:0019538,GO:0022607,GO:0022613,GO:0022618,GO:0022625,GO:0022626,GO:0032991,GO:0034622,GO:0034641,GO:0034645,GO:0040007,GO:0042254,GO:0042255,GO:0042273,GO:0043043,GO:0043167,GO:0043169,GO:0043170,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043603,GO:0043604,GO:0043933,GO:0044085,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:0046872,GO:0046914,GO:0065003,GO:0070925,GO:0071704,GO:0071826,GO:0071840,GO:0071944,GO:0097159,GO:1901363,GO:1901564,GO:1901566,GO:1901576,GO:1990904 - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003484 385.0
DYD2_k127_2270187_4 Metallopeptidase family M24 K01265 - 3.4.11.18 0.00000000000000000000000000000000000000000000000000000000000000000000000000000004767 282.0
DYD2_k127_2270187_5 Ribosomal protein S3, C-terminal domain K02982 GO:0002181,GO:0003674,GO:0003735,GO:0005198,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0006412,GO:0006518,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0015935,GO:0019538,GO:0022626,GO:0022627,GO:0032991,GO:0034641,GO:0034645,GO:0043043,GO:0043170,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:0071704,GO:1901564,GO:1901566,GO:1901576,GO:1990904 - 0.000000000000000000000000000000000000000000000000000000000000000000000000000003222 276.0
DYD2_k127_2270187_6 This is 1 of the proteins that binds and probably mediates the attachment of the 5S RNA into the large ribosomal subunit, where it forms part of the central protuberance. In the 70S ribosome it contacts protein S13 of the 30S subunit (bridge B1b), connecting the 2 subunits K02931 GO:0000027,GO:0003674,GO:0003676,GO:0003723,GO:0003735,GO:0005198,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0005886,GO:0006412,GO:0006518,GO:0006807,GO:0006996,GO:0008097,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0015934,GO:0016020,GO:0016043,GO:0019538,GO:0019843,GO:0022607,GO:0022613,GO:0022618,GO:0022625,GO:0022626,GO:0032991,GO:0034622,GO:0034641,GO:0034645,GO:0040007,GO:0042254,GO:0042255,GO:0042273,GO:0043043,GO:0043170,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043603,GO:0043604,GO:0043933,GO:0044085,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:0065003,GO:0070925,GO:0071704,GO:0071826,GO:0071840,GO:0071944,GO:0097159,GO:1901363,GO:1901564,GO:1901566,GO:1901576,GO:1990904 - 0.00000000000000000000000000000000000000000000000000000000000000000000000000001689 270.0
DYD2_k127_2270187_7 This protein binds to the 23S rRNA, and is important in its secondary structure. It is located near the subunit interface in the base of the L7 L12 stalk, and near the tRNA binding site of the peptidyltransferase center K02933 - - 0.0000000000000000000000000000000000000000000000000000000000000000002735 233.0
DYD2_k127_2270187_8 Located at the back of the 30S subunit body where it stabilizes the conformation of the head with respect to the body K02988 - - 0.00000000000000000000000000000000000000000000000000000000000002268 224.0
DYD2_k127_2270187_9 Catalyzes the reversible transfer of the terminal phosphate group between ATP and AMP. Plays an important role in cellular energy homeostasis and in adenine nucleotide metabolism K00939 - 2.7.4.3 0.000000000000000000000000000000000000000000000000000000000004999 215.0
DYD2_k127_2323151_0 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain - - - 0.000000000000000000000000000000000000000000000000000000000000000001078 247.0
DYD2_k127_2323151_1 Pyruvate flavodoxin/ferredoxin oxidoreductase, thiamine diP-bdg - - - 0.0000000000000000000006266 101.0
DYD2_k127_2323151_2 Catalyzes the condensation of (S)-aspartate-beta- semialdehyde (S)-ASA and pyruvate to 4-hydroxy- tetrahydrodipicolinate (HTPA) K01714 - 4.3.3.7 0.00000000000000000002383 102.0
DYD2_k127_2323151_3 Pyruvate ferredoxin/flavodoxin oxidoreductase - - - 0.0000000000000000003019 97.0
DYD2_k127_2323151_4 SnoaL-like domain - - - 0.0000000000000002606 86.0
DYD2_k127_2329349_0 Belongs to the transketolase family K00615 - 2.2.1.1 6.764e-263 826.0
DYD2_k127_2329349_1 Cytochrome c oxidase is the component of the respiratory chain that catalyzes the reduction of oxygen to water. Subunits 1- 3 form the functional core of the enzyme complex. CO I is the catalytic subunit of the enzyme. Electrons originating in cytochrome c are transferred via the copper A center of subunit 2 and heme A of subunit 1 to the bimetallic center formed by heme A3 and copper B K02274 - 1.9.3.1 1.41e-208 665.0
DYD2_k127_2329349_10 ATP dependent DNA ligase C terminal region - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001061 435.0
DYD2_k127_2329349_11 Sugar (and other) transporter - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001334 433.0
DYD2_k127_2329349_12 Exonuclease of the beta-lactamase fold involved in RNA processing K07576 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001167 407.0
DYD2_k127_2329349_13 Bacterial protein of unknown function (DUF885) - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000378 363.0
DYD2_k127_2329349_14 TIGRFAM 6-phosphogluconate dehydrogenase, decarboxylating K00033 - 1.1.1.343,1.1.1.44 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005812 341.0
DYD2_k127_2329349_15 Transaldolase/Fructose-6-phosphate aldolase K00616 - 2.2.1.2 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000262 324.0
DYD2_k127_2329349_16 Rieske [2Fe-2S] domain K03890 - - 0.000000000000000000000000000000000000000000000000000000000000000000006329 243.0
DYD2_k127_2329349_17 ABC transporter (permease) K15581 - - 0.00000000000000000000000000000000000000000000000000000000000000002552 235.0
DYD2_k127_2329349_18 Isochorismatase family K08281 GO:0003674,GO:0003824,GO:0005488,GO:0005506,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006766,GO:0006767,GO:0006769,GO:0006807,GO:0008150,GO:0008152,GO:0008198,GO:0008936,GO:0009820,GO:0009987,GO:0016787,GO:0016810,GO:0016811,GO:0017144,GO:0030145,GO:0034641,GO:0043167,GO:0043169,GO:0043603,GO:0044237,GO:0044281,GO:0044424,GO:0044464,GO:0046483,GO:0046872,GO:0046914,GO:0051186,GO:0071704,GO:0072524,GO:1901360,GO:1901564 3.5.1.19 0.00000000000000000000000000000000000000000000000000000000000002523 222.0
DYD2_k127_2329349_19 S-adenosyl-l-methionine hydroxide adenosyltransferase K22205 - - 0.00000000000000000000000000000000000000000000000000000000004623 215.0
DYD2_k127_2329349_2 Carbohydrate phosphorylase K00688,K00691 - 2.4.1.1,2.4.1.8 8.229e-197 636.0
DYD2_k127_2329349_20 PFAM binding-protein-dependent transport systems inner membrane component K15582 - - 0.000000000000000000000000000000000000000000000000000000001529 218.0
DYD2_k127_2329349_21 cytochrome C K03889 GO:0005575,GO:0005623,GO:0005886,GO:0005887,GO:0008150,GO:0016020,GO:0016021,GO:0031224,GO:0031226,GO:0040007,GO:0044425,GO:0044459,GO:0044464,GO:0071944 - 0.0000000000000000000000000000000000000000000000000001346 199.0
DYD2_k127_2329349_22 COG1670 Acetyltransferases, including N-acetylases of ribosomal proteins - - - 0.000000000000000000000000000000000000000000000000000144 192.0
DYD2_k127_2329349_23 Glucosamine-6-phosphate isomerases/6-phosphogluconolactonase K01057 - 3.1.1.31 0.0000000000000000000000000000000000000000000000002994 188.0
DYD2_k127_2329349_24 K COG5665 CCR4-NOT transcriptional regulation complex, NOT5 subunit - - - 0.000000000000000000000000000000000000000000000004818 199.0
DYD2_k127_2329349_25 Subunits I and II form the functional core of the enzyme complex. Electrons originating in cytochrome c are transferred via heme a and Cu(A) to the binuclear center formed by heme a3 and Cu(B) K02275 GO:0005575,GO:0005576,GO:0005623,GO:0005886,GO:0005887,GO:0006091,GO:0006119,GO:0006139,GO:0006163,GO:0006725,GO:0006753,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0009117,GO:0009123,GO:0009126,GO:0009141,GO:0009144,GO:0009150,GO:0009161,GO:0009167,GO:0009199,GO:0009205,GO:0009259,GO:0009319,GO:0009987,GO:0015980,GO:0016020,GO:0016021,GO:0016310,GO:0017144,GO:0019637,GO:0019693,GO:0022900,GO:0022904,GO:0031224,GO:0031226,GO:0032991,GO:0034641,GO:0040007,GO:0042773,GO:0044110,GO:0044116,GO:0044117,GO:0044119,GO:0044121,GO:0044237,GO:0044238,GO:0044281,GO:0044403,GO:0044419,GO:0044425,GO:0044459,GO:0044464,GO:0045333,GO:0046034,GO:0046483,GO:0051704,GO:0055086,GO:0055114,GO:0070069,GO:0071704,GO:0071944,GO:0072521,GO:0098796,GO:1901135,GO:1901360,GO:1901564,GO:1902494 1.9.3.1 0.00000000000000000000000000000000000000000000003544 179.0
DYD2_k127_2329349_26 Glucose-6-phosphate dehydrogenase subunit - - - 0.00000000000000000000000000000000000000003017 168.0
DYD2_k127_2329349_27 Probable zinc-ribbon domain - - - 0.0000000000000000000000000000000002153 134.0
DYD2_k127_2329349_28 Peptidase, M23 K21471 - - 0.0000000000000000000000000000005823 138.0
DYD2_k127_2329349_29 ECF-type riboflavin transporter, S component K16924 - - 0.000000000000000000000000005559 117.0
DYD2_k127_2329349_3 Catalyzes the oxidation of glucose 6-phosphate to 6- phosphogluconolactone K00036 - 1.1.1.363,1.1.1.49 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002936 618.0
DYD2_k127_2329349_30 NnrU protein - - - 0.00000000000000000000000003499 116.0
DYD2_k127_2329349_31 Belongs to the UPF0761 family K07058 - - 0.0000000000000000001253 103.0
DYD2_k127_2329349_32 Subtilase family - - - 0.00000000000000131 93.0
DYD2_k127_2329349_33 Transcriptional regulator, MarR family - - - 0.00000000004158 72.0
DYD2_k127_2329349_35 Rhodanese Homology Domain - - - 0.000000851 59.0
DYD2_k127_2329349_4 PFAM DNA primase small subunit - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001354 583.0
DYD2_k127_2329349_5 Cytochrome b/b6/petB K03891 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004753 507.0
DYD2_k127_2329349_6 Kelch motif - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005539 531.0
DYD2_k127_2329349_7 Transaldolase is important for the balance of metabolites in the pentose-phosphate pathway K13810 - 2.2.1.2,5.3.1.9 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002822 478.0
DYD2_k127_2329349_8 TIGRFAM cysteine desulfurase family protein - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008512 474.0
DYD2_k127_2329349_9 ATPases associated with a variety of cellular activities K16786,K16787 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009862 461.0
DYD2_k127_2350902_0 ABC transporter K02056 - 3.6.3.17 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001468 558.0
DYD2_k127_2350902_1 ABC transporter substrate-binding protein PnrA-like - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001847 347.0
DYD2_k127_2350902_2 Belongs to the binding-protein-dependent transport system permease family K02057 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005079 346.0
DYD2_k127_2350902_3 Branched-chain amino acid transport system / permease component K02057 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001119 325.0
DYD2_k127_2350902_4 MafB19-like deaminase K01485 - 3.5.4.1 0.00000000000000000000000000000000000000000000000000000000000001456 228.0
DYD2_k127_2428521_0 3-oxo-5-alpha-steroid 4-dehydrogenase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000005897 257.0
DYD2_k127_2428521_1 Specifically catalyzes the decarboxylation of meso- diaminopimelate (meso-DAP) to L-lysine K01586 - 4.1.1.20 0.00000000000000000000000000000000000000000000000000000000000000000001924 248.0
DYD2_k127_2428521_2 TIGRFAM Raf kinase inhibitor-like protein, YbhB YbcL family K06910 - - 0.00000000000000000000000000000000000007836 148.0
DYD2_k127_2428521_3 Histidine phosphatase superfamily (branch 1) K01834 - 5.4.2.11 0.00000000000000000000000002027 116.0
DYD2_k127_2428521_4 O-methyltransferase - - - 0.0000008472 51.0
DYD2_k127_2455717_0 Catalyzes the first step in hexosamine metabolism, converting fructose-6P into glucosamine-6P using glutamine as a nitrogen source K00820 - 2.6.1.16 2.53e-202 647.0
DYD2_k127_2455717_1 Catalyzes the conversion of glucosamine-6-phosphate to glucosamine-1-phosphate K03431 - 5.4.2.10 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001131 394.0
DYD2_k127_2455717_10 Formation of pseudouridine at positions 38, 39 and 40 in the anticodon stem and loop of transfer RNAs K06173 GO:0001522,GO:0003674,GO:0003824,GO:0006139,GO:0006396,GO:0006399,GO:0006400,GO:0006725,GO:0006807,GO:0008033,GO:0008150,GO:0008152,GO:0009451,GO:0009982,GO:0009987,GO:0010467,GO:0016070,GO:0016853,GO:0016866,GO:0031119,GO:0034470,GO:0034641,GO:0034660,GO:0043170,GO:0043412,GO:0044237,GO:0044238,GO:0046483,GO:0071704,GO:0090304,GO:1901360 5.4.99.12 0.000000000000000000000000000000000000000000002608 174.0
DYD2_k127_2455717_11 Ribosomal protein S9/S16 K02996 GO:0000462,GO:0003674,GO:0003676,GO:0003723,GO:0003735,GO:0005198,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0006139,GO:0006364,GO:0006396,GO:0006412,GO:0006518,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0015935,GO:0016070,GO:0016072,GO:0019538,GO:0022613,GO:0022626,GO:0022627,GO:0030490,GO:0032991,GO:0034470,GO:0034641,GO:0034645,GO:0034660,GO:0042254,GO:0042274,GO:0043043,GO:0043170,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043603,GO:0043604,GO:0044085,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:0046483,GO:0071704,GO:0071840,GO:0090304,GO:0097159,GO:1901360,GO:1901363,GO:1901564,GO:1901566,GO:1901576,GO:1990904 - 0.00000000000000000000000000000000000000002012 157.0
DYD2_k127_2455717_12 MutL protein - - - 0.0000000000000000000000000000000009974 151.0
DYD2_k127_2455717_13 Ribosomal protein L17 K02879 - - 0.00000000000000000000000000000216 123.0
DYD2_k127_2455717_14 Transfers the 4'-phosphopantetheine moiety from coenzyme A to a Ser of acyl-carrier-protein K00997 - 2.7.8.7 0.00000000000000000000000000003823 120.0
DYD2_k127_2455717_15 PFAM Uncharacterised P-loop hydrolase UPF0079 K06925 - - 0.0000000000000000000000000002416 123.0
DYD2_k127_2455717_16 This enzyme acetylates the N-terminal alanine of ribosomal protein S18 K03789 - 2.3.1.128 0.000000000000000000000003211 106.0
DYD2_k127_2455717_17 YbbR-like protein - - - 0.000000000000000000002659 108.0
DYD2_k127_2455717_18 Glycoprotease family - - - 0.000000000000000000003854 102.0
DYD2_k127_2455717_19 - - - - 0.0000000000000000001114 101.0
DYD2_k127_2455717_2 DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates K03040 GO:0003674,GO:0003824,GO:0003899,GO:0006139,GO:0006351,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0016070,GO:0016740,GO:0016772,GO:0016779,GO:0018130,GO:0019438,GO:0032774,GO:0034062,GO:0034641,GO:0034645,GO:0034654,GO:0043170,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044271,GO:0046483,GO:0071704,GO:0090304,GO:0097659,GO:0097747,GO:0140098,GO:1901360,GO:1901362,GO:1901576 2.7.7.6 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008647 340.0
DYD2_k127_2455717_20 Macro domain - - - 0.0000000000000004283 85.0
DYD2_k127_2455717_21 - - - - 0.0000000000001026 79.0
DYD2_k127_2455717_22 Belongs to the bacterial ribosomal protein bL36 family K02919 GO:0003674,GO:0003735,GO:0005198,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0006412,GO:0006518,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0015934,GO:0019538,GO:0022625,GO:0022626,GO:0032991,GO:0034641,GO:0034645,GO:0043043,GO:0043170,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:0071704,GO:1901564,GO:1901566,GO:1901576,GO:1990904 - 0.00000000001025 65.0
DYD2_k127_2455717_23 One of the essential components for the initiation of protein synthesis. Stabilizes the binding of IF-2 and IF-3 on the 30S subunit to which N-formylmethionyl-tRNA(fMet) subsequently binds. Helps modulate mRNA selection, yielding the 30S pre- initiation complex (PIC). Upon addition of the 50S ribosomal subunit IF-1, IF-2 and IF-3 are released leaving the mature 70S translation initation complex K02518 - - 0.0000000009698 59.0
DYD2_k127_2455717_24 pseudouridine synthase activity K06178,K06181,K06183 - 5.4.99.19,5.4.99.20,5.4.99.22 0.000000007683 66.0
DYD2_k127_2455717_25 - - - - 0.000006434 55.0
DYD2_k127_2455717_3 One of the primary rRNA binding proteins, it binds directly to 16S rRNA where it nucleates assembly of the body of the 30S subunit K02986 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000001629 252.0
DYD2_k127_2455717_4 Catalyzes the interconversion of L-alanine and D- alanine. May also act on other amino acids K01775 - 5.1.1.1 0.0000000000000000000000000000000000000000000000000000000000000000000005587 258.0
DYD2_k127_2455717_5 This protein is one of the early assembly proteins of the 50S ribosomal subunit, although it is not seen to bind rRNA by itself. It is important during the early stages of 50S assembly K02871 - - 0.000000000000000000000000000000000000000000000000000000000003158 211.0
DYD2_k127_2455717_6 Catalyzes the condensation of 2 ATP molecules into cyclic di-AMP (c-di-AMP), a second messenger used to regulate differing processes in different bacteria K18672 GO:0003674,GO:0003824,GO:0004016,GO:0005575,GO:0005623,GO:0005886,GO:0005887,GO:0009975,GO:0016020,GO:0016021,GO:0016829,GO:0016849,GO:0031224,GO:0031226,GO:0044425,GO:0044459,GO:0044464,GO:0071944 2.7.7.85 0.00000000000000000000000000000000000000000000000000000000002312 218.0
DYD2_k127_2455717_7 Located on the platform of the 30S subunit, it bridges several disparate RNA helices of the 16S rRNA. Forms part of the Shine-Dalgarno cleft in the 70S ribosome K02948 - - 0.0000000000000000000000000000000000000000000000000000000009474 203.0
DYD2_k127_2455717_8 Bifunctional enzyme that catalyzes the epimerization of the S- and R-forms of NAD(P)HX and the dehydration of the S-form of NAD(P)HX at the expense of ADP, which is converted to AMP. This allows the repair of both epimers of NAD(P)HX, a damaged form of NAD(P)H that is a result of enzymatic or heat-dependent hydration K17758,K17759 - 4.2.1.136,5.1.99.6 0.000000000000000000000000000000000000000000000000000000002842 211.0
DYD2_k127_2455717_9 Located at the top of the head of the 30S subunit, it contacts several helices of the 16S rRNA. In the 70S ribosome it contacts the 23S rRNA (bridge B1a) and protein L5 of the 50S subunit (bridge B1b), connecting the 2 subunits K02952 - - 0.00000000000000000000000000000000000000000000000007719 179.0
DYD2_k127_24601_0 UvrD/REP helicase N-terminal domain K03657,K07465 - 3.6.4.12 1.423e-209 677.0
DYD2_k127_24601_1 AAA ATPase, central domain protein K07478 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002378 438.0
DYD2_k127_24601_2 Protein of unknown function (DUF4446) - - - 0.0000000000000000000000000058 121.0
DYD2_k127_24601_3 Aminotransferase class-V - - - 0.0000000000000000000002018 108.0
DYD2_k127_24601_4 Elongation factor SelB, winged helix K03833 - - 0.00000000001342 74.0
DYD2_k127_24601_5 Bacterial transcriptional activator domain K03556 - - 0.00000002388 67.0
DYD2_k127_2544121_0 Belongs to the class-IV pyridoxal-phosphate-dependent aminotransferase family K00826 - 2.6.1.42 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001703 390.0
DYD2_k127_2544121_1 PFAM Sodium calcium exchanger membrane region K07301 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000003478 283.0
DYD2_k127_2544121_2 transferase activity, transferring glycosyl groups - - - 0.000000000000000000000000000000000000000000000000000000000000000000005462 255.0
DYD2_k127_2544121_3 Staphylococcal nuclease homologues - - - 0.000000000000000000000000000000003977 135.0
DYD2_k127_2544121_4 Cellulose biosynthesis protein BcsQ K02282 - - 0.0000000000000000000000000000005179 138.0
DYD2_k127_2544121_5 Plays an important role in DNA replication, recombination and repair. Binds to ssDNA and to an array of partner proteins to recruit them to their sites of action during DNA metabolism K03111 GO:0000725,GO:0003674,GO:0003676,GO:0003677,GO:0003697,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006139,GO:0006259,GO:0006281,GO:0006298,GO:0006310,GO:0006725,GO:0006807,GO:0006950,GO:0006974,GO:0007154,GO:0008047,GO:0008150,GO:0008152,GO:0009432,GO:0009605,GO:0009987,GO:0009991,GO:0030234,GO:0031668,GO:0033554,GO:0034641,GO:0042802,GO:0043085,GO:0043170,GO:0044093,GO:0044237,GO:0044238,GO:0044260,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0050790,GO:0050896,GO:0051716,GO:0065007,GO:0065009,GO:0071496,GO:0071704,GO:0090304,GO:0097159,GO:0098772,GO:1901360,GO:1901363 - 0.00000000000000000000000006321 113.0
DYD2_k127_2544121_6 Binds as a heterodimer with protein S6 to the central domain of the 16S rRNA, where it helps stabilize the platform of the 30S subunit K02963 - - 0.00000000000000000000001047 110.0
DYD2_k127_2544121_7 Binds together with S18 to 16S ribosomal RNA K02990 - - 0.00000000000000000004802 97.0
DYD2_k127_2544121_8 InterPro IPR014922 - - - 0.0000000000009652 72.0
DYD2_k127_2563750_0 Releases the supercoiling and torsional tension of DNA, which is introduced during the DNA replication and transcription, by transiently cleaving and rejoining one strand of the DNA duplex. Introduces a single-strand break via transesterification at a target site in duplex DNA. The scissile phosphodiester is attacked by the catalytic tyrosine of the enzyme, resulting in the formation of a DNA-(5'-phosphotyrosyl)-enzyme intermediate and the expulsion of a 3'-OH DNA strand. The free DNA strand then undergoes passage around the unbroken strand, thus removing DNA supercoils. Finally, in the religation step, the DNA 3'-OH attacks the covalent intermediate to expel the active-site tyrosine and restore the DNA phosphodiester backbone K03168 - 5.99.1.2 6.232e-205 661.0
DYD2_k127_2563750_1 Catalyzes the addition of an amino acid to the nucleotide precursor UDP-N-acetylmuramoyl-L-alanyl-D-glutamate (UMAG) in the biosynthesis of bacterial cell-wall peptidoglycan K01928 - 6.3.2.13 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007244 412.0
DYD2_k127_2563750_2 Involved in peptidoglycan biosynthesis. Transports lipid-linked peptidoglycan precursors from the inner to the outer leaflet of the cytoplasmic membrane K03980 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004442 340.0
DYD2_k127_2563750_3 tyrosine recombinase K03733,K04763 GO:0008150,GO:0040007 - 0.000000000000000000000000000000000000000000000000000000003355 220.0
DYD2_k127_2563750_4 Acetyltransferase (GNAT) domain - - - 0.00000000000000000000000000000000000000000000008587 183.0
DYD2_k127_2563750_5 FemAB family K05363,K11693 - 2.3.2.10,2.3.2.16 0.00000000000000000000000000006638 136.0
DYD2_k127_2624949_0 AcrB/AcrD/AcrF family - - - 0.0 1330.0
DYD2_k127_2624949_1 AcrB/AcrD/AcrF family - - - 5.213e-267 856.0
DYD2_k127_2624949_10 Part of the outer membrane protein assembly complex, which is involved in assembly and insertion of beta-barrel proteins into the outer membrane - - - 0.00000000000003197 88.0
DYD2_k127_2624949_11 PFAM chitin-binding domain 3 protein - - - 0.0000000000001429 86.0
DYD2_k127_2624949_12 RHS Repeat - - - 0.00000001803 67.0
DYD2_k127_2624949_2 cellulase activity - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005166 582.0
DYD2_k127_2624949_3 cellulase activity - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001299 467.0
DYD2_k127_2624949_4 acid phosphatase activity - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000364 419.0
DYD2_k127_2624949_6 - - - - 0.00000000000000000000000000000000000000000000000000000001953 208.0
DYD2_k127_2624949_7 RNA polymerase II activating transcription factor binding - - - 0.000000000000000000000000000004986 136.0
DYD2_k127_2624949_8 Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family - - - 0.0000000000000000000000005657 115.0
DYD2_k127_2624949_9 Glycosyltransferase like family 2 K00721 - 2.4.1.83 0.0000000000000000000000006995 107.0
DYD2_k127_2738419_0 Domain present in phytochromes and cGMP-specific phosphodiesterases. - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005273 404.0
DYD2_k127_2738419_1 Belongs to the arginase family K01480 - 3.5.3.11 0.0000000000000000000000000000000000000000000000000000000000000000000000000000001538 278.0
DYD2_k127_2738419_2 response regulator, receiver - - - 0.0000000000000000000000000000000000000000000000000000000000000000000009379 243.0
DYD2_k127_2738419_3 High-affinity nickel-transport protein K07241 - - 0.00000000000000000000000000000000000000000000000000000000000000007118 231.0
DYD2_k127_2738419_5 Belongs to the Fur family K03711,K09825 - - 0.00000000000000000002232 105.0
DYD2_k127_2738419_6 - - - - 0.00000000000009095 77.0
DYD2_k127_2738419_8 Transglycosylase associated protein - - - 0.00009981 49.0
DYD2_k127_2738419_9 F420H(2)-dependent quinone reductase - GO:0003674,GO:0005488,GO:0005575,GO:0005618,GO:0005623,GO:0005886,GO:0008150,GO:0008152,GO:0016020,GO:0030312,GO:0031406,GO:0036094,GO:0043167,GO:0043168,GO:0043177,GO:0044464,GO:0048037,GO:0050662,GO:0055114,GO:0070967,GO:0071944,GO:0097159,GO:0097367,GO:1901363 - 0.0007951 50.0
DYD2_k127_2774000_0 Flavodoxin domain K00230 - 1.3.5.3 0.00000000000000000000000000000000000000000000000000000000000001592 221.0
DYD2_k127_2774000_1 SMART HNH nuclease - - - 0.000000000000000000000000000000000000000000002727 166.0
DYD2_k127_2774000_10 PIN domain - - - 0.0001211 45.0
DYD2_k127_2774000_2 SnoaL-like polyketide cyclase - - - 0.000000000000000000000000000000000000000000255 171.0
DYD2_k127_2774000_3 - - - - 0.0000000000000000000000000000000000000000002857 176.0
DYD2_k127_2774000_4 PFAM cytochrome c biogenesis protein, transmembrane region - - - 0.0000000000000000000000000002598 125.0
DYD2_k127_2774000_5 Cupin 2, conserved barrel domain protein - - - 0.0000000000000000000000002845 110.0
DYD2_k127_2774000_6 Domain of unknown function (DUF4111) K00984 - 2.7.7.47 0.000000000000001189 81.0
DYD2_k127_2774000_7 Cupredoxin-like domain - - - 0.000000000000008489 83.0
DYD2_k127_2774000_8 Short C-terminal domain K08982 - - 0.0000001494 56.0
DYD2_k127_2774000_9 Penicillin amidase - - - 0.00006005 55.0
DYD2_k127_2819318_0 AAA domain, putative AbiEii toxin, Type IV TA system K01990 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004768 436.0
DYD2_k127_2819318_1 ABC-2 type transporter K01992 - - 0.00000000000000000000000000000000000000000000000000000000003167 215.0
DYD2_k127_2819318_2 ABC-2 type transporter K01992 - - 0.000000000000000000000000000000000000000000000000000000000343 215.0
DYD2_k127_2819318_3 - - - - 0.0000000000000000000000000006853 133.0
DYD2_k127_2819318_4 Calx-beta domain - - - 0.000000000004288 81.0
DYD2_k127_2819318_5 Hint domain - - - 0.0000000002024 75.0
DYD2_k127_2819318_6 Zinc carboxypeptidase - - - 0.000000009545 70.0
DYD2_k127_2819318_7 COG3209 Rhs family protein - - - 0.00000004977 67.0
DYD2_k127_2824031_0 D-xylulose 5-phosphate D-fructose 6-phosphate phosphoketolase K01621 - 4.1.2.22,4.1.2.9 0.0 1290.0
DYD2_k127_2824031_1 FAD-dependent pyridine nucleotide-disulfide oxidoreductase K17218 - 1.8.5.4 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007682 443.0
DYD2_k127_2824031_10 DsrE/DsrF-like family - - - 0.00000000000000000000002309 104.0
DYD2_k127_2824031_11 Sulfurtransferase TusA - - - 0.00000000000000000004927 93.0
DYD2_k127_2824031_12 Transcriptional K03892 - - 0.000000000000000000127 93.0
DYD2_k127_2824031_2 Catalyzes the formation of acetyl phosphate from acetate and ATP. Can also catalyze the reverse reaction K00925 - 2.7.2.1 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004322 314.0
DYD2_k127_2824031_3 Polysulphide reductase, NrfD - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000001669 279.0
DYD2_k127_2824031_4 Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain - - - 0.000000000000000000000000000000000000000000000000000000001074 208.0
DYD2_k127_2824031_5 4Fe-4S dicluster domain K00184 - - 0.00000000000000000000000000000000000000000000000000000001632 211.0
DYD2_k127_2824031_6 COG1670 acetyltransferases, including N-acetylases of ribosomal proteins - - - 0.000000000000000000000000000000000000000000000000001187 186.0
DYD2_k127_2824031_7 DsrE/DsrF/DrsH-like family - - - 0.0000000000000000000000000000000000000000000008313 174.0
DYD2_k127_2824031_8 Histidine kinase K07675 - 2.7.13.3 0.000000000000000000000000000000000000002332 166.0
DYD2_k127_2824031_9 Sulfurtransferase TusA - - - 0.000000000000000000000000001434 114.0
DYD2_k127_286928_0 AAA domain, putative AbiEii toxin, Type IV TA system K01990 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001839 411.0
DYD2_k127_286928_1 Exporter of polyketide antibiotics K01992 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000797 416.0
DYD2_k127_286928_2 TIGRFAM LAO AO transport system ATPase K07588 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000002352 291.0
DYD2_k127_286928_3 GTP cyclohydrolase I K01495 GO:0000166,GO:0001882,GO:0001883,GO:0003674,GO:0003824,GO:0003933,GO:0003934,GO:0005488,GO:0005525,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006066,GO:0006725,GO:0006729,GO:0006732,GO:0006807,GO:0008150,GO:0008152,GO:0008270,GO:0009058,GO:0009108,GO:0009987,GO:0016787,GO:0016810,GO:0016814,GO:0017076,GO:0017144,GO:0018130,GO:0019001,GO:0019238,GO:0019438,GO:0019751,GO:0032549,GO:0032550,GO:0032553,GO:0032555,GO:0032561,GO:0034311,GO:0034312,GO:0034641,GO:0035639,GO:0036094,GO:0042558,GO:0042559,GO:0043167,GO:0043168,GO:0043169,GO:0044237,GO:0044249,GO:0044271,GO:0044281,GO:0044283,GO:0044424,GO:0044464,GO:0046146,GO:0046165,GO:0046173,GO:0046483,GO:0046872,GO:0046914,GO:0051186,GO:0051188,GO:0071704,GO:0097159,GO:0097367,GO:1901265,GO:1901360,GO:1901362,GO:1901363,GO:1901564,GO:1901566,GO:1901576,GO:1901615,GO:1901617 3.5.4.16 0.00000000000000000000000000000000000000000000000000000000000000000000000005951 266.0
DYD2_k127_286928_4 PFAM Bacterial regulatory proteins, tetR family - - - 0.00000000000000000000000000000000000000000000000000005217 194.0
DYD2_k127_286928_5 methylmalonyl-CoA mutase C-terminal K01849 - 5.4.99.2 0.000000000000000000000000000000000000000000000000001082 186.0
DYD2_k127_286928_6 Dehydrogenase K00074 - 1.1.1.157 0.00000000000000000000000000000000000000000000002102 178.0
DYD2_k127_286928_7 pterin-4-alpha-carbinolamine dehydratase K01724 - 4.2.1.96 0.0000000000000000000000000003546 116.0
DYD2_k127_286928_8 NERD domain protein - - - 0.0004119 48.0
DYD2_k127_2869376_0 protein involved in exopolysaccharide biosynthesis - - - 4.687e-212 679.0
DYD2_k127_2869376_1 belongs to the thioredoxin family K20543 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004351 581.0
DYD2_k127_2869376_2 ROK family - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005233 337.0
DYD2_k127_2869376_3 Oxidoreductase family, NAD-binding Rossmann fold - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004298 319.0
DYD2_k127_2869376_4 ABC transporter substrate-binding protein K10543 - - 0.00000000000000000000000000000000000000000000000000000000000000000000001153 257.0
DYD2_k127_2869376_5 KR domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000001295 244.0
DYD2_k127_2869376_6 Xaa-Pro aminopeptidase - - - 0.000000000001948 76.0
DYD2_k127_2886381_0 Evidence 5 No homology to any previously reported sequences - - - 6.857e-274 862.0
DYD2_k127_2886381_1 PEP-utilising enzyme, mobile domain K01007 - 2.7.9.2 4.62e-250 789.0
DYD2_k127_2886381_10 Transcriptional regulator K22293 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000004953 255.0
DYD2_k127_2886381_11 acetyltransferase component of pyruvate dehydrogenase complex K00627 - 2.3.1.12 0.00000000000000000000000000000000000000000000000000000000000000000009603 244.0
DYD2_k127_2886381_12 Transcriptional regulator K22293 - - 0.000000000000000000000000000000000000000000000000000000000006314 217.0
DYD2_k127_2886381_13 CO dehydrogenase flavoprotein C-terminal domain K03519 - 1.2.5.3 0.0000000000000000000000000000000000000000000000000002966 196.0
DYD2_k127_2886381_14 [2Fe-2S] binding domain - - - 0.00000000000000000000000000000000000000000000000002406 190.0
DYD2_k127_2886381_15 Cupin 2, conserved barrel domain protein - - - 0.00000000000000000000004192 102.0
DYD2_k127_2886381_16 Calcineurin-like phosphoesterase K07313 - 3.1.3.16 0.0000000000000000001283 104.0
DYD2_k127_2886381_17 KR domain - GO:0005575,GO:0005623,GO:0005886,GO:0016020,GO:0044464,GO:0071944 - 0.00006026 50.0
DYD2_k127_2886381_2 oxidoreductase activity, acting on the aldehyde or oxo group of donors, disulfide as acceptor K00161,K11381,K21416,K21417 - 1.2.4.1,1.2.4.4 5.614e-195 634.0
DYD2_k127_2886381_3 Dehydrogenase K00140 - 1.2.1.18,1.2.1.27 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007323 544.0
DYD2_k127_2886381_4 PEP-utilising enzyme, mobile domain K01006 - 2.7.9.1 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009743 504.0
DYD2_k127_2886381_5 Transaldolase is important for the balance of metabolites in the pentose-phosphate pathway K00616 - 2.2.1.2 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001385 450.0
DYD2_k127_2886381_6 Putative cyclase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009145 414.0
DYD2_k127_2886381_7 Transketolase K00615 - 2.2.1.1 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001077 338.0
DYD2_k127_2886381_8 Transketolase, pyrimidine binding domain K00615 - 2.2.1.1 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003605 335.0
DYD2_k127_2918462_0 TIGRFAM methylmalonyl-CoA mutase, large subunit K01848 - 5.4.99.2 1.1e-218 696.0
DYD2_k127_2918462_1 Helix-hairpin-helix domain K04477 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002522 432.0
DYD2_k127_2918462_10 Luciferase-like monooxygenase - - - 0.00000000000000000000000000000000000000000000000000002401 206.0
DYD2_k127_2918462_11 Substrate binding domain of ABC-type glycine betaine transport system K05845 - - 0.00000000000000000000000000000000000000000000008858 181.0
DYD2_k127_2918462_12 Dodecin - - - 0.00000000000000009645 87.0
DYD2_k127_2918462_13 Beta-propeller domains of methanol dehydrogenase type K06872 - - 0.000000009376 68.0
DYD2_k127_2918462_14 Predicted membrane protein (DUF2207) - - - 0.00002906 57.0
DYD2_k127_2918462_2 Belongs to the Glu Leu Phe Val dehydrogenases family K00261 - 1.4.1.3 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006074 431.0
DYD2_k127_2918462_3 ATPases associated with a variety of cellular activities K05847 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009667 398.0
DYD2_k127_2918462_4 PFAM Fatty acid desaturase, type 2 K03921 - 1.14.19.11,1.14.19.2,1.14.19.26 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003132 367.0
DYD2_k127_2918462_5 Helix-hairpin-helix class 2 (Pol1 family) motifs - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000003293 284.0
DYD2_k127_2918462_6 Phosphotriesterase family K07048 - - 0.00000000000000000000000000000000000000000000000000000000000002231 230.0
DYD2_k127_2918462_7 ABC transporter (Permease) K05846 - - 0.0000000000000000000000000000000000000000000000000000000001591 211.0
DYD2_k127_2918462_8 Protein of unknown function (DUF1684) K09164 - - 0.0000000000000000000000000000000000000000000000000000000003021 209.0
DYD2_k127_2918462_9 Binding-protein-dependent transport system inner membrane component K05846 - - 0.000000000000000000000000000000000000000000000000000002182 199.0
DYD2_k127_2996194_0 Enoyl- acyl-carrier-protein reductase NADH K00208,K11611 GO:0000166,GO:0003674,GO:0003824,GO:0004312,GO:0004318,GO:0005488,GO:0005504,GO:0005575,GO:0005618,GO:0005623,GO:0005886,GO:0006082,GO:0006629,GO:0006631,GO:0006633,GO:0008150,GO:0008152,GO:0008289,GO:0008610,GO:0009058,GO:0009059,GO:0009273,GO:0009987,GO:0016020,GO:0016053,GO:0016491,GO:0016627,GO:0016628,GO:0016740,GO:0016746,GO:0016747,GO:0019752,GO:0030312,GO:0030497,GO:0031406,GO:0032787,GO:0033293,GO:0034645,GO:0036094,GO:0042546,GO:0043167,GO:0043168,GO:0043170,GO:0043177,GO:0043436,GO:0044036,GO:0044038,GO:0044085,GO:0044237,GO:0044238,GO:0044249,GO:0044255,GO:0044260,GO:0044281,GO:0044283,GO:0044464,GO:0046394,GO:0048037,GO:0050662,GO:0051287,GO:0055114,GO:0070403,GO:0070589,GO:0071554,GO:0071704,GO:0071766,GO:0071767,GO:0071768,GO:0071840,GO:0071944,GO:0072330,GO:0097159,GO:1901265,GO:1901363,GO:1901576 1.3.1.10,1.3.1.9 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000263 300.0
DYD2_k127_2996194_1 Involved in the cellular defense against the biological effects of O6-methylguanine (O6-MeG) and O4-methylthymine (O4-MeT) in DNA. Repairs the methylated nucleobase in DNA by stoichiometrically transferring the methyl group to a cysteine residue in the enzyme. This is a suicide reaction the enzyme is irreversibly inactivated K00567 - 2.1.1.63 0.000000000000000000000000000000000000000000000000001756 192.0
DYD2_k127_2996194_2 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily K07104 - 1.13.11.2 0.0000000000000000000000000000000000000006624 152.0
DYD2_k127_2996194_3 PFAM Methyltransferase K15256 - - 0.00000000000000000000001419 108.0
DYD2_k127_2996194_4 Belongs to the LOG family K06966 - 3.2.2.10 0.00000000000008317 76.0
DYD2_k127_3002240_0 Bacterial capsule synthesis protein PGA_cap K07282 - - 1.958e-222 702.0
DYD2_k127_3002240_1 peptidase S9B dipeptidylpeptidase IV domain protein K01278 - 3.4.14.5 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001526 496.0
DYD2_k127_3002240_10 Domain of unknown function (DUF4173) - - - 0.000000000000000000000000000000000000001144 165.0
DYD2_k127_3002240_11 aminopeptidase N - - - 0.00000000000000000000000000000000000003279 163.0
DYD2_k127_3002240_12 Belongs to the thioredoxin family K03671 - - 0.000000000000000000000000000000003878 131.0
DYD2_k127_3002240_13 YCII-related domain - - - 0.00000000000000000002488 97.0
DYD2_k127_3002240_14 A domain in the BMP inhibitor chordin and in microbial proteins. - - - 0.000000000000000006675 91.0
DYD2_k127_3002240_15 PFAM regulatory protein, ArsR - - - 0.00000000000001378 80.0
DYD2_k127_3002240_16 - - - - 0.00000000001721 68.0
DYD2_k127_3002240_17 PFAM 4Fe-4S K00176 - 1.2.7.3 0.00000000005155 66.0
DYD2_k127_3002240_2 Belongs to the sigma-70 factor family K03088 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007488 445.0
DYD2_k127_3002240_3 D-alanyl-D-alanine carboxypeptidase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002274 329.0
DYD2_k127_3002240_4 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000003599 254.0
DYD2_k127_3002240_5 Nitroreductase family - - - 0.000000000000000000000000000000000000000000000000000000000000000000008026 244.0
DYD2_k127_3002240_6 PPIases accelerate the folding of proteins. It catalyzes the cis-trans isomerization of proline imidic peptide bonds in oligopeptides K03768 - 5.2.1.8 0.0000000000000000000000000000000000000000000000000000000000000000003195 234.0
DYD2_k127_3002240_7 EamA-like transporter family - - - 0.000000000000000000000000000000000000000000000000000000000000000001657 248.0
DYD2_k127_3002240_8 PFAM response regulator receiver - - - 0.00000000000000000000000000000000000000000000000000000000000000015 231.0
DYD2_k127_3002240_9 Pyruvate flavodoxin/ferredoxin oxidoreductase, thiamine diP-bdg - - - 0.00000000000000000000000000000000000000000000000000000000000002867 225.0
DYD2_k127_3021083_0 Myo-inositol-1-phosphate synthase K01858 - 5.5.1.4 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003314 609.0
DYD2_k127_3021083_1 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus K00341 - 1.6.5.3 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001276 570.0
DYD2_k127_3021083_10 Major facilitator Superfamily - - - 0.00000000000000000000000000000000000000000000000000000000504 224.0
DYD2_k127_3021083_11 SMART phosphoesterase PHP domain protein - - - 0.000000000000000000000000000000000000000000000002574 183.0
DYD2_k127_3021083_12 Removes the phosphate from trehalose 6-phosphate to produce free trehalose K01087 - 3.1.3.12 0.0000000000000000000000000000000002319 148.0
DYD2_k127_3021083_13 Belongs to the CDP-alcohol phosphatidyltransferase class-I family K00995,K00999 GO:0003674,GO:0003824,GO:0003881,GO:0003882,GO:0005575,GO:0005618,GO:0005622,GO:0005623,GO:0005737,GO:0006629,GO:0006644,GO:0006650,GO:0006793,GO:0006796,GO:0008150,GO:0008152,GO:0008610,GO:0008654,GO:0009058,GO:0009987,GO:0016740,GO:0016772,GO:0016780,GO:0017169,GO:0019637,GO:0030312,GO:0040007,GO:0044237,GO:0044238,GO:0044249,GO:0044255,GO:0044424,GO:0044464,GO:0045017,GO:0046474,GO:0046486,GO:0071704,GO:0071944,GO:0090407,GO:1901576 2.7.8.11,2.7.8.5 0.0000000000000000000000000001965 124.0
DYD2_k127_3021083_14 Bacterial lipid A biosynthesis acyltransferase K02517 - 2.3.1.241 0.000000000000000000000000001496 123.0
DYD2_k127_3021083_15 Kdo2-lipid A biosynthetic process K02517,K22311 - 2.3.1.241,2.3.1.265 0.000000000000000000000000002533 127.0
DYD2_k127_3021083_16 ATPases associated with a variety of cellular activities K01990 - - 0.0000000000000000001078 100.0
DYD2_k127_3021083_17 DNA-binding transcription factor activity K03892 - - 0.000000000001429 72.0
DYD2_k127_3021083_2 Proton-conducting membrane transporter K00342 - 1.6.5.3 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001125 520.0
DYD2_k127_3021083_3 Glycosyltransferase family 20 K00697 - 2.4.1.15,2.4.1.347 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007491 422.0
DYD2_k127_3021083_4 NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient K00343 - 1.6.5.3 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005886 359.0
DYD2_k127_3021083_5 AAA domain, putative AbiEii toxin, Type IV TA system K01990 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002523 332.0
DYD2_k127_3021083_6 Glycosyl transferase 4-like domain K08256 - 2.4.1.345 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005862 328.0
DYD2_k127_3021083_7 ABC-2 family transporter protein K01992 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000006112 291.0
DYD2_k127_3021083_8 PFAM GCN5-related N-acetyltransferase - - - 0.00000000000000000000000000000000000000000000000000000000000002141 228.0
DYD2_k127_3021083_9 PFAM GCN5-related N-acetyltransferase - - - 0.0000000000000000000000000000000000000000000000000000000003436 217.0
DYD2_k127_3058555_0 AAA domain, putative AbiEii toxin, Type IV TA system K09695 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007916 455.0
DYD2_k127_3058555_1 FAD dependent oxidoreductase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000001339 274.0
DYD2_k127_3058555_10 Catalyzes the radical-mediated insertion of two sulfur atoms into the C-6 and C-8 positions of the octanoyl moiety bound to the lipoyl domains of lipoate-dependent enzymes, thereby converting the octanoylated domains into lipoylated derivatives K03644 GO:0003674,GO:0003824,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006082,GO:0006464,GO:0006629,GO:0006631,GO:0006633,GO:0006732,GO:0006790,GO:0006807,GO:0008150,GO:0008152,GO:0008610,GO:0009058,GO:0009106,GO:0009107,GO:0009108,GO:0009249,GO:0009987,GO:0010467,GO:0016053,GO:0016740,GO:0016782,GO:0016783,GO:0016992,GO:0018065,GO:0018130,GO:0018193,GO:0018205,GO:0019538,GO:0019752,GO:0032787,GO:0036211,GO:0043170,GO:0043412,GO:0043436,GO:0044237,GO:0044238,GO:0044249,GO:0044255,GO:0044260,GO:0044267,GO:0044272,GO:0044281,GO:0044283,GO:0044424,GO:0044464,GO:0046394,GO:0046483,GO:0051186,GO:0051188,GO:0051604,GO:0070283,GO:0071704,GO:0072330,GO:1901360,GO:1901362,GO:1901564,GO:1901576 2.8.1.8 0.0000000000000000000000000000008448 123.0
DYD2_k127_3058555_2 ABC-2 type transporter K09694 - - 0.000000000000000000000000000000000000000000000000000000000000000000000235 245.0
DYD2_k127_3058555_3 Transport permease protein K09694 - - 0.000000000000000000000000000000000000000000000000000000000000000009925 233.0
DYD2_k127_3058555_4 NmrA-like family K00329,K00356 - 1.6.5.3,1.6.99.3 0.0000000000000000000000000000000000000000000000000000000007682 223.0
DYD2_k127_3058555_5 Catalyzes the transfer of endogenously produced octanoic acid from octanoyl-acyl-carrier-protein onto the lipoyl domains of lipoate-dependent enzymes. Lipoyl-ACP can also act as a substrate although octanoyl-ACP is likely to be the physiological substrate K03801 - 2.3.1.181 0.0000000000000000000000000000000000000000000000000000005657 206.0
DYD2_k127_3058555_6 Belongs to the UPF0173 family - - - 0.000000000000000000000000000000000000000000000000002975 190.0
DYD2_k127_3058555_7 - - - - 0.0000000000000000000000000000000000000001718 158.0
DYD2_k127_3058555_9 beta-lactamase domain protein - - - 0.00000000000000000000000000000000000002241 154.0
DYD2_k127_3059379_0 RNase_H superfamily - - - 3.134e-223 721.0
DYD2_k127_3059379_1 DNA polymerase LigD, polymerase K01971 - 6.5.1.1 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000041 590.0
DYD2_k127_3059379_2 DNA polymerase Ligase (LigD) - - - 0.00000000000000000000000000000000000000000000000000000000008402 232.0
DYD2_k127_3059379_3 Evidence 4 Homologs of previously reported genes of - - - 0.00000000000000000000000000000000000000000000000000006514 191.0
DYD2_k127_3059379_4 glycolate biosynthetic process K01091 - 3.1.3.18 0.0000000000000000000000000008639 123.0
DYD2_k127_3059379_5 phosphatase - - - 0.00000000000000000000000005357 115.0
DYD2_k127_3059379_6 DegT/DnrJ/EryC1/StrS aminotransferase family K04127 - 5.1.1.17 0.00000000000000007719 88.0
DYD2_k127_3059379_7 - - - - 0.0000000001503 72.0
DYD2_k127_3059379_8 diguanylate cyclase - - - 0.00007909 55.0
DYD2_k127_3097643_0 Belongs to the DNA polymerase type-C family. DnaE2 subfamily K14162 - 2.7.7.7 5.033e-232 766.0
DYD2_k127_3097643_1 ATPases associated with a variety of cellular activities K01990 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004855 393.0
DYD2_k127_3097643_2 ABC-type multidrug transport system, permease component K01992 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000003692 274.0
DYD2_k127_3097643_3 ABC-type multidrug transport system, permease component K01992 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000559 263.0
DYD2_k127_3097643_4 Major facilitator superfamily - - - 0.0000000000000000000000000000000000007437 148.0
DYD2_k127_3097643_5 peptidase U32 K08303 GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0044424,GO:0044444,GO:0044464 - 0.000000000000004286 78.0
DYD2_k127_3101269_0 Phenylalanyl-tRNA synthetase, beta subunit K01890 GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006082,GO:0006139,GO:0006399,GO:0006412,GO:0006418,GO:0006432,GO:0006518,GO:0006520,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009328,GO:0009987,GO:0010467,GO:0016070,GO:0019538,GO:0019752,GO:0032991,GO:0034641,GO:0034645,GO:0034660,GO:0043038,GO:0043039,GO:0043043,GO:0043170,GO:0043436,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044281,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0071704,GO:0090304,GO:1901360,GO:1901564,GO:1901566,GO:1901576,GO:1902494 6.1.1.20 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000014 540.0
DYD2_k127_3101269_1 Belongs to the class-II aminoacyl-tRNA synthetase family. Phe-tRNA synthetase alpha subunit type 1 subfamily K01889 - 6.1.1.20 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001676 346.0
DYD2_k127_3101269_2 Methylpurine-DNA glycosylase (MPG) K03652 - 3.2.2.21 0.00000000000000000000000000000000000000000000000000001486 196.0
DYD2_k127_3101269_3 Endonuclease that is involved in the suppression of homologous recombination and may therefore have a key role in the control of bacterial genetic diversity K07456 - - 0.0000000000000000000000000000000000000000000002042 181.0
DYD2_k127_3101269_4 IF-3 binds to the 30S ribosomal subunit and shifts the equilibrum between 70S ribosomes and their 50S and 30S subunits in favor of the free subunits, thus enhancing the availability of 30S subunits on which protein synthesis initiation begins K02520 GO:0003674,GO:0003676,GO:0003723,GO:0003743,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006412,GO:0006413,GO:0006518,GO:0006807,GO:0006996,GO:0008135,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0016020,GO:0016043,GO:0019538,GO:0022411,GO:0032790,GO:0032984,GO:0032988,GO:0034641,GO:0034645,GO:0043021,GO:0043022,GO:0043043,GO:0043170,GO:0043603,GO:0043604,GO:0043933,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044424,GO:0044444,GO:0044464,GO:0044877,GO:0071704,GO:0071826,GO:0071840,GO:0097159,GO:1901363,GO:1901564,GO:1901566,GO:1901576,GO:1903008 - 0.00000000000000000000000000000000000000000004532 167.0
DYD2_k127_3101269_5 Binds directly to 23S ribosomal RNA and is necessary for the in vitro assembly process of the 50S ribosomal subunit. It is not involved in the protein synthesizing functions of that subunit K02887 GO:0000027,GO:0003674,GO:0003735,GO:0005198,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0006996,GO:0008150,GO:0009987,GO:0015934,GO:0016043,GO:0022607,GO:0022613,GO:0022618,GO:0022625,GO:0022626,GO:0032991,GO:0034622,GO:0042254,GO:0042255,GO:0042273,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043933,GO:0044085,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:0065003,GO:0070925,GO:0071826,GO:0071840,GO:1990904 - 0.000000000000000000000000000000000000003874 148.0
DYD2_k127_3101269_6 Ribosomal protein L35 K02916 GO:0003674,GO:0003735,GO:0005198,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0015934,GO:0022625,GO:0022626,GO:0032991,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:1990904 - 0.000000000218 70.0
DYD2_k127_3101269_7 Colicin V production protein - - - 0.000004992 56.0
DYD2_k127_3118647_0 PFAM peptidase M24 K01262,K01271,K01274 - 3.4.11.9,3.4.13.9 0.00000000000000000000000000000000000000000000000000000000000000000000000003789 259.0
DYD2_k127_3118647_1 Belongs to the peptidase S8 family K14647 - - 0.0000000000000000000000000000000000000000000309 186.0
DYD2_k127_3118647_2 D-glucuronyl C5-epimerase C-terminus - - - 0.0000000968 66.0
DYD2_k127_3144701_0 Catalyzes the reversible transfer of the terminal phosphate of ATP to form a long-chain polyphosphate (polyP) K00937 - 2.7.4.1 6.517e-247 781.0
DYD2_k127_3144701_1 Involved in the gluconeogenesis. Catalyzes the conversion of oxaloacetate (OAA) to phosphoenolpyruvate (PEP) through direct phosphoryl transfer between the nucleoside triphosphate and OAA K01610 - 4.1.1.49 1.976e-212 673.0
DYD2_k127_3144701_10 Protein of unknown function DUF47 K07220 - - 0.00000000000000000000000000000000000000000000000000000000565 207.0
DYD2_k127_3144701_11 Secreted repeat of unknown function - - - 0.0000000000000000000000000000004474 128.0
DYD2_k127_3144701_12 response to heat K07090 - - 0.0000000000000000000000000007803 119.0
DYD2_k127_3144701_13 Bacterial protein of unknown function (DUF839) - - - 0.0000000000004719 83.0
DYD2_k127_3144701_2 calcium, potassium:sodium antiporter activity K07301 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005569 458.0
DYD2_k127_3144701_3 PFAM phosphate transporter K03306 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005871 362.0
DYD2_k127_3144701_4 PFAM oxidoreductase, molybdopterin binding - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006362 319.0
DYD2_k127_3144701_5 PFAM glycoside hydrolase family 10 - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003389 338.0
DYD2_k127_3144701_6 Oxidoreductase FAD-binding domain protein - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000005096 306.0
DYD2_k127_3144701_7 Belongs to the NUDIX hydrolase family K03574 - 3.6.1.55 0.00000000000000000000000000000000000000000000000000000000000000000000000000000001806 283.0
DYD2_k127_3144701_8 CYTH - - - 0.00000000000000000000000000000000000000000000000000000000000000000001832 252.0
DYD2_k127_3167553_0 L-carnitine dehydratase bile acid-inducible protein F - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000003238 303.0
DYD2_k127_3167553_1 Serine threonine protein kinase involved in cell cycle control - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000002106 261.0
DYD2_k127_3167553_2 Belongs to the peptidase S8 family K14645 - - 0.000000000000000000000000000000000000000000000000000000000000000000000005655 254.0
DYD2_k127_3167553_3 Luciferase-like monooxygenase - - - 0.000000000000000000000000000000000000000000000000000000000000000000686 241.0
DYD2_k127_3167553_4 Protein of unknown function (DUF3037) - - - 0.000000000000000000000000000000000001021 143.0
DYD2_k127_3167553_5 Acetyltransferase (GNAT) domain K03824,K09964 - - 0.000000000000000000000000000000000001834 149.0
DYD2_k127_3167553_6 GAF domain - - - 0.00000000000000001462 93.0
DYD2_k127_3167553_7 Peptidase M16 - - - 0.0000004439 56.0
DYD2_k127_3169726_0 Protein of unknown function (DUF3179) - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005252 398.0
DYD2_k127_3169726_1 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain K00382 - 1.8.1.4 0.0000000000000000000000000000000000000000000000000000000000000000000000000000005459 281.0
DYD2_k127_3169726_10 Alpha/beta hydrolase family - - - 0.0000000001049 72.0
DYD2_k127_3169726_11 Low molecular weight phosphotyrosine protein phosphatase K03741 - 1.20.4.1 0.0000001228 61.0
DYD2_k127_3169726_2 Carboxylate--amine ligase - - - 0.0000000000000000000000000000000000000000001888 170.0
DYD2_k127_3169726_3 Catalyzes the epimerization of the S- and R-forms of NAD(P)HX, a damaged form of NAD(P)H that is a result of enzymatic or heat-dependent hydration. This is a prerequisite for the S- specific NAD(P)H-hydrate dehydratase to allow the repair of both epimers of NAD(P)HX K17759 - 5.1.99.6 0.000000000000000000000000000000000000000002498 166.0
DYD2_k127_3169726_4 PFAM Cyclic nucleotide-binding K10914 - - 0.000000000000000000000000000000000000002289 156.0
DYD2_k127_3169726_5 Calcineurin-like phosphoesterase superfamily domain - - - 0.0000000000000000000000000007447 122.0
DYD2_k127_3169726_6 glyoxalase III activity - - - 0.0000000000000000000000000478 112.0
DYD2_k127_3169726_7 COG0526 Thiol-disulfide isomerase and thioredoxins - - - 0.0000000000000000000000982 109.0
DYD2_k127_3169726_8 Fasciclin - GO:0005575,GO:0005576,GO:0005615,GO:0005623,GO:0005886,GO:0008150,GO:0009605,GO:0009607,GO:0016020,GO:0030288,GO:0030313,GO:0031975,GO:0042597,GO:0043207,GO:0044403,GO:0044419,GO:0044421,GO:0044464,GO:0050896,GO:0051701,GO:0051704,GO:0051707,GO:0052173,GO:0052200,GO:0052564,GO:0052572,GO:0071944,GO:0075136 - 0.00000000000001133 83.0
DYD2_k127_3169726_9 Transglycosylase associated protein - - - 0.0000000000000795 81.0
DYD2_k127_3176951_0 Belongs to the 5'-nucleotidase family K01081 - 3.1.3.5 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006209 619.0
DYD2_k127_3176951_1 The transhydrogenation between NADH and NADP is coupled to respiration and ATP hydrolysis and functions as a proton pump across the membrane K00325 - 1.6.1.2 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001129 374.0
DYD2_k127_3176951_2 Belongs to the monovalent cation proton antiporter 2 (CPA2) transporter (TC 2.A.37) family K03455 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000719 314.0
DYD2_k127_3176951_3 HAD-hyrolase-like - - - 0.0000000000000000000000000000000000000000000000287 177.0
DYD2_k127_3176951_4 Kef-type K transport systems membrane components - - - 0.00000000000000000000000000000000000004257 153.0
DYD2_k127_3210812_0 Involved in the restart of stalled replication forks. Recognizes and binds the arrested nascent DNA chain at stalled replication forks. It can open the DNA duplex, via its helicase activity, and promote assembly of the primosome and loading of the major replicative helicase DnaB onto DNA K04066 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007087 456.0
DYD2_k127_3210812_1 Specifically methylates position 2 of adenine 2503 in 23S rRNA and position 2 of adenine 37 in tRNAs K06941 GO:0000154,GO:0001510,GO:0003674,GO:0003824,GO:0005575,GO:0005618,GO:0005623,GO:0005886,GO:0006139,GO:0006364,GO:0006396,GO:0006399,GO:0006400,GO:0006725,GO:0006807,GO:0008033,GO:0008150,GO:0008152,GO:0008168,GO:0008173,GO:0008175,GO:0008649,GO:0008757,GO:0009451,GO:0009987,GO:0010467,GO:0016020,GO:0016070,GO:0016072,GO:0016740,GO:0016741,GO:0022613,GO:0030312,GO:0030488,GO:0031167,GO:0032259,GO:0034470,GO:0034641,GO:0034660,GO:0042254,GO:0043170,GO:0043412,GO:0043414,GO:0044085,GO:0044237,GO:0044238,GO:0044260,GO:0044464,GO:0046483,GO:0070475,GO:0071704,GO:0071840,GO:0071944,GO:0090304,GO:0140098,GO:0140101,GO:0140102,GO:1901360 2.1.1.192 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001016 314.0
DYD2_k127_3210812_2 Responsible for synthesis of pseudouridine from uracil K06180 - 5.4.99.23 0.000000000000000000000000000000000000000000000000000000000000000000001103 253.0
DYD2_k127_3210812_3 Attaches a formyl group to the free amino group of methionyl-tRNA(fMet). The formyl group appears to play a dual role in the initiator identity of N-formylmethionyl-tRNA by promoting its recognition by IF2 and preventing the misappropriation of this tRNA by the elongation apparatus K00604 GO:0003674,GO:0003824,GO:0004479,GO:0006139,GO:0006396,GO:0006399,GO:0006400,GO:0006412,GO:0006413,GO:0006464,GO:0006518,GO:0006725,GO:0006807,GO:0008033,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009451,GO:0009987,GO:0010467,GO:0016070,GO:0016740,GO:0016741,GO:0016742,GO:0019538,GO:0019988,GO:0034470,GO:0034641,GO:0034645,GO:0034660,GO:0036211,GO:0043043,GO:0043170,GO:0043412,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0046483,GO:0071704,GO:0071951,GO:0090304,GO:0140098,GO:0140101,GO:1901360,GO:1901564,GO:1901566,GO:1901576 2.1.2.9 0.000000000000000000000000000000000000000000000000000000000000001406 229.0
DYD2_k127_3210812_4 Putative neutral zinc metallopeptidase K06973 - - 0.00000000000000000000000000000000000000000000000000003829 196.0
DYD2_k127_3210812_5 amino acids such as valine, to avoid such errors it has two additional distinct tRNA(Ile)-dependent editing activities. One activity is designated as 'pretransfer' editing and involves the hydrolysis of activated Val-AMP. The other activity is designated 'posttransfer' editing and involves deacylation of mischarged Val-tRNA(Ile) K01870 GO:0003674,GO:0003824,GO:0004812,GO:0004822,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006082,GO:0006139,GO:0006399,GO:0006412,GO:0006418,GO:0006428,GO:0006518,GO:0006520,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0016070,GO:0016874,GO:0016875,GO:0019538,GO:0019752,GO:0034641,GO:0034645,GO:0034660,GO:0043038,GO:0043039,GO:0043043,GO:0043170,GO:0043436,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044281,GO:0044424,GO:0044464,GO:0046483,GO:0071704,GO:0090304,GO:0140098,GO:0140101,GO:1901360,GO:1901564,GO:1901566,GO:1901576 6.1.1.5 0.00000000000000000000000000000000000000000002329 172.0
DYD2_k127_3210812_6 Essential for recycling GMP and indirectly, cGMP K00942 - 2.7.4.8 0.00000000000000000000000000000000000000000547 167.0
DYD2_k127_3210812_7 Removes the formyl group from the N-terminal Met of newly synthesized proteins. Requires at least a dipeptide for an efficient rate of reaction. N-terminal L-methionine is a prerequisite for activity but the enzyme has broad specificity at other positions K01462 GO:0003674,GO:0003824,GO:0006464,GO:0006807,GO:0008150,GO:0008152,GO:0008463,GO:0009987,GO:0016787,GO:0016810,GO:0016811,GO:0018193,GO:0018206,GO:0019538,GO:0031365,GO:0036211,GO:0042586,GO:0043170,GO:0043412,GO:0043686,GO:0044237,GO:0044238,GO:0044260,GO:0044267,GO:0071704,GO:1901564 3.5.1.88 0.00000000000000000000000000000000000000001637 164.0
DYD2_k127_3210812_8 This protein specifically catalyzes the removal of signal peptides from prolipoproteins K03101 GO:0005575,GO:0005623,GO:0005886,GO:0016020,GO:0044464,GO:0071944 3.4.23.36 0.00000000000000000000003174 107.0
DYD2_k127_3223348_0 Luciferase-like monooxygenase - - - 0.000000000000000000000000000000000000000000000000000000000000209 224.0
DYD2_k127_3223348_1 RibD C-terminal domain - - - 0.0000000000000000000000000000000404 135.0
DYD2_k127_3223348_2 Zn-finger in ubiquitin-hydrolases and other protein - - - 0.0000000000000000000001551 107.0
DYD2_k127_3223348_3 Major Facilitator Superfamily - - - 0.0000000000000000000001557 104.0
DYD2_k127_3223348_4 Can catalyze the hydrolysis of ATP in the presence of single-stranded DNA, the ATP-dependent uptake of single-stranded DNA by duplex DNA, and the ATP-dependent hybridization of homologous single-stranded DNAs. It interacts with LexA causing its activation and leading to its autocatalytic cleavage K03553 - - 0.0000000000006545 78.0
DYD2_k127_3223348_5 Poorly processive, error-prone DNA polymerase involved in untargeted mutagenesis. Copies undamaged DNA at stalled replication forks, which arise in vivo from mismatched or misaligned primer ends. These misaligned primers can be extended by PolIV. Exhibits no 3'-5' exonuclease (proofreading) activity. May be involved in translesional synthesis, in conjunction with the beta clamp from PolIII K02346 GO:0006950,GO:0006974,GO:0007154,GO:0008150,GO:0009432,GO:0009605,GO:0009987,GO:0009991,GO:0031668,GO:0033554,GO:0050896,GO:0051716,GO:0071496 2.7.7.7 0.000000000005976 78.0
DYD2_k127_3223348_6 Cold shock K03704 - - 0.000000006512 61.0
DYD2_k127_3223348_7 - - - - 0.00004738 55.0
DYD2_k127_3223348_8 ParE toxin of type II toxin-antitoxin system, parDE K06218 - - 0.00009613 48.0
DYD2_k127_3282849_0 Bacterial protein of unknown function (DUF853) K06915 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001234 512.0
DYD2_k127_3282849_1 PTS system sugar-specific permease component K03475 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003046 500.0
DYD2_k127_3282849_10 HNH endonuclease - - - 0.000000000000000000000000000000000000000000000000000000002623 205.0
DYD2_k127_3282849_11 Catalyzes the oxidation of either pyridoxine 5'- phosphate (PNP) or pyridoxamine 5'-phosphate (PMP) into pyridoxal 5'-phosphate (PLP) K00275 - 1.4.3.5 0.00000000000000000000000000000000000000000000000000000001379 203.0
DYD2_k127_3282849_12 transferase activity, transferring glycosyl groups - - - 0.0000000000000000000000000000000000000000000000000001919 199.0
DYD2_k127_3282849_13 rRNA binding - - - 0.00000000000000000000000000000000000000008121 160.0
DYD2_k127_3282849_14 Sigma-70, region 4 K03088 - - 0.000000000000000000000000000000000000974 146.0
DYD2_k127_3282849_15 transporter K07238,K11021 - - 0.0000000000000000000000000000001258 133.0
DYD2_k127_3282849_16 Catalyzes a reversible aldol reaction between acetaldehyde and D-glyceraldehyde 3-phosphate to generate 2-deoxy- D-ribose 5-phosphate K01619 GO:0003674,GO:0003824,GO:0004139,GO:0005975,GO:0006139,GO:0006725,GO:0006753,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0009056,GO:0009058,GO:0009117,GO:0009166,GO:0009262,GO:0009264,GO:0009987,GO:0016052,GO:0016829,GO:0016830,GO:0016832,GO:0018130,GO:0019438,GO:0019439,GO:0019637,GO:0034404,GO:0034641,GO:0034654,GO:0034655,GO:0044237,GO:0044238,GO:0044248,GO:0044249,GO:0044270,GO:0044271,GO:0044281,GO:0044283,GO:0046434,GO:0046483,GO:0046700,GO:0055086,GO:0071704,GO:1901135,GO:1901136,GO:1901292,GO:1901360,GO:1901361,GO:1901362,GO:1901575,GO:1901576 4.1.2.4 0.0000000000000000000000000000009195 132.0
DYD2_k127_3282849_17 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 - - - 0.000000000000000000000000000008928 131.0
DYD2_k127_3282849_18 PTS system, Lactose/Cellobiose specific IIB subunit K02822 - 2.7.1.194 0.000000000000000000005201 95.0
DYD2_k127_3282849_19 Belongs to the Fur family K03711 - - 0.0000000000000001616 93.0
DYD2_k127_3282849_2 transferase activity, transferring glycosyl groups K09118,K13693,K21349 - 2.4.1.266,2.4.1.268 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006777 467.0
DYD2_k127_3282849_20 Activator of Hsp90 ATPase homolog 1-like protein - - - 0.0000000000000002178 87.0
DYD2_k127_3282849_21 Major facilitator Superfamily - - - 0.00000000000009673 83.0
DYD2_k127_3282849_22 Conserved repeat domain - - - 0.000000000284 70.0
DYD2_k127_3282849_23 Uncharacterized protein conserved in bacteria (DUF2334) K06986 - - 0.0000000003059 65.0
DYD2_k127_3282849_24 ATP dependent DNA ligase C terminal region K01971 - 6.5.1.1 0.00000002178 64.0
DYD2_k127_3282849_25 Alpha beta hydrolase - - - 0.0000008329 61.0
DYD2_k127_3282849_3 Glycosyl transferase family 2 K21349 - 2.4.1.268 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003591 382.0
DYD2_k127_3282849_4 Belongs to the NAD(P)-dependent epimerase dehydratase family K01784 - 5.1.3.2 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000411 353.0
DYD2_k127_3282849_5 Belongs to the DEAD box helicase family K05592 - 3.6.4.13 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000014 346.0
DYD2_k127_3282849_6 PolyA polymerase K00974 - 2.7.7.72 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007482 333.0
DYD2_k127_3282849_7 Belongs to the glycerate kinase type-1 family K00865 - 2.7.1.165 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004696 324.0
DYD2_k127_3282849_8 General (non sugar-specific) component of the phosphoenolpyruvate-dependent sugar phosphotransferase system (sugar PTS). This major carbohydrate active-transport system catalyzes the phosphorylation of incoming sugar substrates concomitantly with their translocation across the cell membrane. Enzyme I transfers the phosphoryl group from phosphoenolpyruvate (PEP) to the phosphoryl carrier protein (HPr) K01007,K08483 - 2.7.3.9,2.7.9.2 0.000000000000000000000000000000000000000000000000000000000000000000000000000005144 274.0
DYD2_k127_3282849_9 DNA repair enzyme that has both DNA N-glycosylase activity and AP-lyase activity. The DNA N-glycosylase activity releases various damaged pyrimidines from DNA by cleaving the N- glycosidic bond, leaving an AP (apurinic apyrimidinic) site. The AP-lyase activity cleaves the phosphodiester bond 3' to the AP site by a beta-elimination, leaving a 3'-terminal unsaturated sugar and a product with a terminal 5'-phosphate K10773 - 4.2.99.18 0.00000000000000000000000000000000000000000000000000000000000008012 224.0
DYD2_k127_3286418_0 Required for accurate and efficient protein synthesis under certain stress conditions. May act as a fidelity factor of the translation reaction, by catalyzing a one-codon backward translocation of tRNAs on improperly translocated ribosomes. Back- translocation proceeds from a post-translocation (POST) complex to a pre-translocation (PRE) complex, thus giving elongation factor G a second chance to translocate the tRNAs correctly. Binds to ribosomes in a GTP-dependent manner K03596 - - 1.119e-265 832.0
DYD2_k127_3286418_1 Heat shock 70 kDa protein K04043 - - 1.919e-264 828.0
DYD2_k127_3286418_10 VanW like protein - - - 0.0000000000000000000000000000000001088 153.0
DYD2_k127_3286418_11 - - - - 0.00000000000000001663 83.0
DYD2_k127_3286418_12 Endonuclease Exonuclease Phosphatase - - - 0.00000000007417 76.0
DYD2_k127_3286418_13 - - - - 0.0000000002274 70.0
DYD2_k127_3286418_14 Binds directly to 16S ribosomal RNA K02968 - - 0.000000002455 69.0
DYD2_k127_3286418_15 Lamin Tail Domain - - - 0.00004374 57.0
DYD2_k127_3286418_2 Catalyzes the reversible conversion of 2- phosphoglycerate into phosphoenolpyruvate. It is essential for the degradation of carbohydrates via glycolysis K01689 - 4.2.1.11 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009034 582.0
DYD2_k127_3286418_3 Belongs to the glyceraldehyde-3-phosphate dehydrogenase family K00134 - 1.2.1.12 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000101 472.0
DYD2_k127_3286418_4 Belongs to the phosphoglycerate kinase family K00927 GO:0001871,GO:0002020,GO:0003674,GO:0003824,GO:0004618,GO:0005488,GO:0005515,GO:0005575,GO:0005618,GO:0005622,GO:0005623,GO:0005737,GO:0005975,GO:0006082,GO:0006090,GO:0006091,GO:0006096,GO:0006139,GO:0006163,GO:0006164,GO:0006165,GO:0006725,GO:0006732,GO:0006733,GO:0006753,GO:0006754,GO:0006757,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0009056,GO:0009058,GO:0009108,GO:0009117,GO:0009123,GO:0009124,GO:0009126,GO:0009127,GO:0009132,GO:0009135,GO:0009141,GO:0009142,GO:0009144,GO:0009145,GO:0009150,GO:0009152,GO:0009156,GO:0009161,GO:0009165,GO:0009166,GO:0009167,GO:0009168,GO:0009179,GO:0009185,GO:0009199,GO:0009201,GO:0009205,GO:0009206,GO:0009259,GO:0009260,GO:0009893,GO:0009986,GO:0009987,GO:0010468,GO:0010604,GO:0010628,GO:0010755,GO:0010756,GO:0010954,GO:0016052,GO:0016053,GO:0016301,GO:0016310,GO:0016740,GO:0016772,GO:0016774,GO:0017144,GO:0018130,GO:0019222,GO:0019359,GO:0019362,GO:0019363,GO:0019438,GO:0019439,GO:0019637,GO:0019693,GO:0019752,GO:0019899,GO:0030162,GO:0030193,GO:0030195,GO:0030246,GO:0030247,GO:0030312,GO:0031323,GO:0031325,GO:0032101,GO:0032102,GO:0032268,GO:0032270,GO:0032787,GO:0034404,GO:0034641,GO:0034654,GO:0034655,GO:0042866,GO:0043436,GO:0043532,GO:0044237,GO:0044238,GO:0044248,GO:0044249,GO:0044270,GO:0044271,GO:0044281,GO:0044283,GO:0044424,GO:0044464,GO:0045862,GO:0046031,GO:0046034,GO:0046390,GO:0046394,GO:0046434,GO:0046483,GO:0046496,GO:0046700,GO:0046939,GO:0048518,GO:0048519,GO:0048522,GO:0048583,GO:0048585,GO:0050789,GO:0050794,GO:0050818,GO:0050819,GO:0050878,GO:0051171,GO:0051173,GO:0051186,GO:0051188,GO:0051239,GO:0051241,GO:0051246,GO:0051247,GO:0051917,GO:0051919,GO:0055086,GO:0060255,GO:0061041,GO:0061045,GO:0065007,GO:0065008,GO:0070613,GO:0071704,GO:0071944,GO:0072330,GO:0072521,GO:0072522,GO:0072524,GO:0072525,GO:0080090,GO:0080134,GO:0090407,GO:1900046,GO:1900047,GO:1901135,GO:1901137,GO:1901292,GO:1901293,GO:1901360,GO:1901361,GO:1901362,GO:1901564,GO:1901566,GO:1901575,GO:1901576,GO:1903034,GO:1903035,GO:1903317,GO:1903319,GO:2001065 2.7.2.3 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008269 460.0
DYD2_k127_3286418_5 Involved in the biosynthesis of porphyrin-containing compound - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000001052 292.0
DYD2_k127_3286418_6 Negative regulator of class I heat shock genes (grpE- dnaK-dnaJ and groELS operons). Prevents heat-shock induction of these operons K03705 - - 0.0000000000000000000000000000000000000000000000000000000000000000000004832 251.0
DYD2_k127_3286418_7 Phosphorylase superfamily K00757 GO:0003674,GO:0003824,GO:0004850,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006139,GO:0006213,GO:0006218,GO:0006725,GO:0006807,GO:0006950,GO:0006974,GO:0008150,GO:0008152,GO:0009056,GO:0009116,GO:0009119,GO:0009164,GO:0009987,GO:0016043,GO:0016740,GO:0016757,GO:0016763,GO:0019439,GO:0022607,GO:0030955,GO:0031420,GO:0033554,GO:0034214,GO:0034641,GO:0034655,GO:0034656,GO:0042454,GO:0042802,GO:0043167,GO:0043169,GO:0043933,GO:0044085,GO:0044237,GO:0044238,GO:0044248,GO:0044270,GO:0044281,GO:0044282,GO:0044424,GO:0044444,GO:0044464,GO:0046108,GO:0046131,GO:0046133,GO:0046135,GO:0046483,GO:0046700,GO:0046872,GO:0050896,GO:0051259,GO:0051716,GO:0055086,GO:0065003,GO:0071704,GO:0071840,GO:0072527,GO:0072529,GO:1901135,GO:1901136,GO:1901360,GO:1901361,GO:1901564,GO:1901565,GO:1901575,GO:1901657,GO:1901658 2.4.2.3 0.000000000000000000000000000000000000000000000000000000000000009104 235.0
DYD2_k127_3286418_8 PFAM ROK family protein K00845 - 2.7.1.2 0.0000000000000000000000000000000000000000000000000000000005445 216.0
DYD2_k127_3286418_9 Participates actively in the response to hyperosmotic and heat shock by preventing the aggregation of stress-denatured proteins, in association with DnaK and GrpE. It is the nucleotide exchange factor for DnaK and may function as a thermosensor. Unfolded proteins bind initially to DnaJ K03687 - - 0.0000000000000000000000000000000000000007716 154.0
DYD2_k127_335102_0 SMART alpha amylase catalytic sub domain K01187 - 3.2.1.20 8.046e-222 700.0
DYD2_k127_335102_1 FtsX-like permease family - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001132 506.0
DYD2_k127_335102_2 ABC-type transport system involved in lipoprotein release permease component K02004 - - 0.00000000000000000000000902 119.0
DYD2_k127_3362129_0 Aldehyde oxidase and xanthine dehydrogenase, molybdopterin binding K03520 - 1.2.5.3 8.209e-287 905.0
DYD2_k127_3362129_1 AAA ATPase domain - - - 3.862e-235 773.0
DYD2_k127_3362129_10 Protein of unknown function (DUF642) - - - 0.000000000000000000001986 112.0
DYD2_k127_3362129_11 SnoaL-like domain K06893 - - 0.0000000000000000002486 92.0
DYD2_k127_3362129_12 Integral membrane protein CcmA involved in cell shape determination - - - 0.0000000000008372 81.0
DYD2_k127_3362129_13 - - - - 0.000000000008752 78.0
DYD2_k127_3362129_2 membrane K13277,K15125,K15539 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002093 507.0
DYD2_k127_3362129_3 Amidohydrolase family - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000919 456.0
DYD2_k127_3362129_4 Pyridoxal-phosphate dependent enzyme - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001353 419.0
DYD2_k127_3362129_5 Dihydroorotate dehydrogenase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007136 395.0
DYD2_k127_3362129_6 pyrroloquinoline quinone binding - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000002025 303.0
DYD2_k127_3362129_7 methyltransferase activity - - - 0.000000000000000000000000000000000000000000000000000000004011 205.0
DYD2_k127_3362129_8 calcium- and calmodulin-responsive adenylate cyclase activity - - - 0.000000000000000000000000000000000000000007978 168.0
DYD2_k127_3362129_9 COG2114 Adenylate cyclase, family 3 (some proteins contain HAMP domain) - - - 0.000000000000000000000000000006966 136.0
DYD2_k127_3415731_0 Catalyzes the attachment of alanine to tRNA(Ala) in a two-step reaction alanine is first activated by ATP to form Ala- AMP and then transferred to the acceptor end of tRNA(Ala). Also edits incorrectly charged Ser-tRNA(Ala) and Gly-tRNA(Ala) via its editing domain K01872 GO:0003674,GO:0003824,GO:0004812,GO:0004813,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006082,GO:0006139,GO:0006396,GO:0006399,GO:0006400,GO:0006412,GO:0006418,GO:0006419,GO:0006518,GO:0006520,GO:0006725,GO:0006807,GO:0008033,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009451,GO:0009987,GO:0010467,GO:0016070,GO:0016597,GO:0016874,GO:0016875,GO:0019538,GO:0019752,GO:0031406,GO:0034470,GO:0034641,GO:0034645,GO:0034660,GO:0036094,GO:0043038,GO:0043039,GO:0043043,GO:0043167,GO:0043168,GO:0043170,GO:0043177,GO:0043412,GO:0043436,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044281,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0071704,GO:0090304,GO:0140098,GO:0140101,GO:1901360,GO:1901564,GO:1901566,GO:1901576 6.1.1.7 5.709e-229 740.0
DYD2_k127_3415731_1 Catalyzes the acyloin condensation reaction between C atoms 2 and 3 of pyruvate and glyceraldehyde 3-phosphate to yield 1-deoxy-D-xylulose-5-phosphate (DXP) K01662 - 2.2.1.7 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000242 587.0
DYD2_k127_3415731_10 FtsJ-like methyltransferase K06442 - 2.1.1.226,2.1.1.227 0.0000000000000000000000000000000000000000005382 164.0
DYD2_k127_3415731_11 transferase activity, transferring acyl groups K15520 - 2.3.1.189 0.0000000000000000000000002129 115.0
DYD2_k127_3415731_12 Could be a nuclease involved in processing of the 5'-end of pre-16S rRNA K07447 GO:0000966,GO:0000967,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006139,GO:0006364,GO:0006396,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0009987,GO:0010467,GO:0016070,GO:0016072,GO:0022613,GO:0034470,GO:0034471,GO:0034641,GO:0034660,GO:0042254,GO:0043170,GO:0044085,GO:0044237,GO:0044238,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0071704,GO:0071840,GO:0090304,GO:1901360 - 0.000000000000000000000902 106.0
DYD2_k127_3415731_13 Bidirectionally degrades single-stranded DNA into large acid-insoluble oligonucleotides, which are then degraded further into small acid-soluble oligonucleotides K03602 - 3.1.11.6 0.00000002264 59.0
DYD2_k127_3415731_14 Uncharacterised protein family (UPF0180) - - - 0.0007768 49.0
DYD2_k127_3415731_15 Baseplate J-like protein K01218 - 3.2.1.78 0.0007815 52.0
DYD2_k127_3415731_2 cell division - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007854 336.0
DYD2_k127_3415731_3 Bidirectionally degrades single-stranded DNA into large acid-insoluble oligonucleotides, which are then degraded further into small acid-soluble oligonucleotides K03601 - 3.1.11.6 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003403 338.0
DYD2_k127_3415731_4 Catalyzes the 2-thiolation of uridine at the wobble position (U34) of tRNA, leading to the formation of s(2)U34 K00566 - 2.8.1.13 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000306 313.0
DYD2_k127_3415731_5 PFAM peptidase M24 K01262,K01271 - 3.4.11.9,3.4.13.9 0.0000000000000000000000000000000000000000000000000000000000000000000000003075 265.0
DYD2_k127_3415731_6 Master enzyme that delivers sulfur to a number of partners involved in Fe-S cluster assembly, tRNA modification or cofactor biosynthesis. Catalyzes the removal of elemental sulfur atoms from cysteine to produce alanine. Functions as a sulfur delivery protein for Fe-S cluster synthesis onto IscU, an Fe-S scaffold assembly protein, as well as other S acceptor proteins K04487 - 2.8.1.7 0.000000000000000000000000000000000000000000000000000000000000000000003958 241.0
DYD2_k127_3415731_7 Pfam Adenylate and Guanylate cyclase catalytic domain - - - 0.000000000000000000000000000000000000000000000000000000000000000006772 242.0
DYD2_k127_3415731_8 Involved in peptide bond synthesis. Stimulates efficient translation and peptide-bond synthesis on native or reconstituted 70S ribosomes in vitro. Probably functions indirectly by altering the affinity of the ribosome for aminoacyl-tRNA, thus increasing their reactivity as acceptors for peptidyl transferase K02356 GO:0003674,GO:0003676,GO:0003723,GO:0003746,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006412,GO:0006414,GO:0006518,GO:0006807,GO:0008135,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0019538,GO:0034641,GO:0034645,GO:0043043,GO:0043170,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044424,GO:0044444,GO:0044464,GO:0071704,GO:0097159,GO:1901363,GO:1901564,GO:1901566,GO:1901576 - 0.00000000000000000000000000000000000000000000000000000000000009561 218.0
DYD2_k127_3415731_9 Functions as a peptidoglycan terminase that cleaves nascent peptidoglycan strands endolytically to terminate their elongation K07082 - - 0.0000000000000000000000000000000000000000000001476 187.0
DYD2_k127_3426704_0 D-ala D-ala ligase C-terminus K03802 - 6.3.2.29,6.3.2.30 0.0 1126.0
DYD2_k127_3426704_1 Insulinase (Peptidase family M16) - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001702 480.0
DYD2_k127_3426704_10 Cleaves peptides in various proteins in a process that requires ATP hydrolysis. Has a chymotrypsin-like activity. Plays a major role in the degradation of misfolded proteins K01358 - 3.4.21.92 0.000000000000000000000000000000000000000000000000000000000000000000000000000000004003 278.0
DYD2_k127_3426704_11 Pterin 4 alpha carbinolamine dehydratase K01724 - 4.2.1.96 0.000000000000000000000000000000000000000000000000000000000000000000000000000006163 266.0
DYD2_k127_3426704_12 Belongs to the class-II pyridoxal-phosphate-dependent aminotransferase family. Histidinol-phosphate aminotransferase subfamily K00817 - 2.6.1.9 0.000000000000000000000000000000000000004896 163.0
DYD2_k127_3426704_13 Involved in the cellular defense against the biological effects of O6-methylguanine (O6-MeG) and O4-methylthymine (O4-MeT) in DNA. Repairs the methylated nucleobase in DNA by stoichiometrically transferring the methyl group to a cysteine residue in the enzyme. This is a suicide reaction the enzyme is irreversibly inactivated K00567 - 2.1.1.63 0.00000000000000000000000000000008818 129.0
DYD2_k127_3426704_14 Thioesterase-like superfamily K07107 - - 0.0000000000000000000000003194 110.0
DYD2_k127_3426704_15 Protein of unknown function (DUF3105) - - - 0.00000000000000001494 93.0
DYD2_k127_3426704_16 Ami_3 K01448 - 3.5.1.28 0.000000000000005253 87.0
DYD2_k127_3426704_17 His Kinase A (phosphoacceptor) domain - - - 0.00000000000004928 85.0
DYD2_k127_3426704_18 Cytochrome C biogenesis protein K05516 - - 0.000009599 57.0
DYD2_k127_3426704_2 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain K00382 - 1.8.1.4 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001166 439.0
DYD2_k127_3426704_3 Mur ligase middle domain K03802 - 6.3.2.29,6.3.2.30 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005482 420.0
DYD2_k127_3426704_4 peptidase K01295 - 3.4.17.11 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000158 356.0
DYD2_k127_3426704_5 Peptidase family S51 K13282 - 3.4.15.6 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001377 327.0
DYD2_k127_3426704_6 Insulinase (Peptidase family M16) - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001452 327.0
DYD2_k127_3426704_7 ATP-dependent specificity component of the Clp protease. It directs the protease to specific substrates. Can perform chaperone functions in the absence of ClpP K03544 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000001447 299.0
DYD2_k127_3426704_8 Involved in protein export. Acts as a chaperone by maintaining the newly synthesized protein in an open conformation. Functions as a peptidyl-prolyl cis-trans isomerase K03545 GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0044424,GO:0044464 - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000008201 292.0
DYD2_k127_3426704_9 Dehydrogenase E1 component K00166 - 1.2.4.4 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000001437 291.0
DYD2_k127_3454007_0 aminotransferase class I and II K10907 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001452 435.0
DYD2_k127_3454007_1 Polyphosphate kinase 2 (PPK2) - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008822 312.0
DYD2_k127_3454007_2 Allows the formation of correctly charged Asn-tRNA(Asn) or Gln-tRNA(Gln) through the transamidation of misacylated Asp- tRNA(Asn) or Glu-tRNA(Gln) in organisms which lack either or both of asparaginyl-tRNA or glutaminyl-tRNA synthetases. The reaction takes place in the presence of glutamine and ATP through an activated phospho-Asp-tRNA(Asn) or phospho-Glu-tRNA(Gln) K02434 - 6.3.5.6,6.3.5.7 0.000000000000000000000000000000000000005782 147.0
DYD2_k127_3454007_3 Ribosomal protein L11 methyltransferase (PrmA) - - - 0.00000000000000004678 91.0
DYD2_k127_3536860_0 Catalyzes the attachment of glutamate to tRNA(Glu) in a two-step reaction glutamate is first activated by ATP to form Glu-AMP and then transferred to the acceptor end of tRNA(Glu) K01885 - 6.1.1.17 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005046 419.0
DYD2_k127_3536860_1 alcohol dehydrogenase K13953,K18382 - 1.1.1.1 0.00000000000000000000000000000000000000000000000000000000000000000000000000001488 271.0
DYD2_k127_3536860_2 L-asparaginase II - - - 0.00000000000000000000000000000000000000000000000000000000000000000005137 246.0
DYD2_k127_3536860_3 endonuclease III K03575 - - 0.000000000000000000000000000000000000000000000000000000001061 218.0
DYD2_k127_3536860_4 Protein of unknown function (DUF554) K07150 - - 0.0000000000000000000000000000000000000000000000003042 202.0
DYD2_k127_3536860_5 phosphatase activity K07025 - - 0.000000000000000000000000000001815 138.0
DYD2_k127_3536860_6 Thioredoxin peroxidase K03564 GO:0000302,GO:0000303,GO:0000305,GO:0003674,GO:0003824,GO:0004601,GO:0005575,GO:0005622,GO:0005623,GO:0005634,GO:0006801,GO:0006950,GO:0006979,GO:0008150,GO:0008152,GO:0008379,GO:0009056,GO:0009636,GO:0009987,GO:0010035,GO:0016209,GO:0016491,GO:0016684,GO:0016999,GO:0017001,GO:0017144,GO:0019430,GO:0019725,GO:0033554,GO:0034599,GO:0034614,GO:0035690,GO:0042221,GO:0042493,GO:0042542,GO:0042592,GO:0042737,GO:0042743,GO:0042744,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0044237,GO:0044248,GO:0044424,GO:0044464,GO:0045454,GO:0046677,GO:0050789,GO:0050794,GO:0050896,GO:0051186,GO:0051187,GO:0051716,GO:0051920,GO:0055114,GO:0061687,GO:0061691,GO:0061692,GO:0065007,GO:0065008,GO:0070301,GO:0070887,GO:0071236,GO:0071450,GO:0071451,GO:0072593,GO:0097237,GO:0098754,GO:0098869,GO:1901700,GO:1901701,GO:1990748 1.11.1.15 0.0001703 53.0
DYD2_k127_3545308_0 ATPase with chaperone activity K07391 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004306 424.0
DYD2_k127_3545308_1 Class II Aldolase and Adducin N-terminal domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004565 404.0
DYD2_k127_3545308_2 Alcohol dehydrogenase zinc-binding domain protein - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001003 379.0
DYD2_k127_3545308_3 PFAM band 7 protein - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005416 319.0
DYD2_k127_3545308_4 PFAM response regulator receiver K02282 - - 0.0000000000000000000000000000000000000000000000000000000000000109 232.0
DYD2_k127_3545308_5 DNA recombination-mediator protein A K04096 - - 0.0000000000000000000000000000000000000000000000007308 196.0
DYD2_k127_3545308_6 Prolyl oligopeptidase family - - - 0.000000000000000000000000000000000006814 149.0
DYD2_k127_3545308_7 Membrane-bound serine protease (ClpP class) K07403 - - 0.00000000000000000000000001483 116.0
DYD2_k127_3545308_8 CotH kinase protein - - - 0.000000002205 62.0
DYD2_k127_3564440_0 Proton pump that utilizes the energy of pyrophosphate hydrolysis as the driving force for proton movement across the membrane. Generates a proton motive force K15987 - 3.6.1.1 3.977e-259 818.0
DYD2_k127_3564440_1 tRNA binding K04566 - 6.1.1.6 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002935 428.0
DYD2_k127_3564440_10 repeat protein - - - 0.00000000000000000001502 107.0
DYD2_k127_3564440_11 Phosphoglycerate mutase family K02226 - 3.1.3.73 0.00000000000000000001669 99.0
DYD2_k127_3564440_12 Involved in the tonB-independent uptake of proteins K03641 - - 0.00009414 55.0
DYD2_k127_3564440_2 Catalyzes the attachment of serine to tRNA(Ser). Is also able to aminoacylate tRNA(Sec) with serine, to form the misacylated tRNA L-seryl-tRNA(Sec), which will be further converted into selenocysteinyl-tRNA(Sec) K01875 - 6.1.1.11 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002726 417.0
DYD2_k127_3564440_3 TIGRFAM RNA polymerase sigma-54 factor, RpoN K03092 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002205 351.0
DYD2_k127_3564440_4 Catalyzes the dephosphorylation of undecaprenyl diphosphate (UPP). Confers resistance to bacitracin K06153 - 3.6.1.27 0.000000000000000000000000000000000000000000000000000000000000006389 226.0
DYD2_k127_3564440_5 Major role in the synthesis of nucleoside triphosphates other than ATP. The ATP gamma phosphate is transferred to the NDP beta phosphate via a ping-pong mechanism, using a phosphorylated active-site intermediate K00940 GO:0003674,GO:0003824,GO:0004550,GO:0005575,GO:0005622,GO:0005623,GO:0006139,GO:0006163,GO:0006165,GO:0006220,GO:0006725,GO:0006753,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0009117,GO:0009132,GO:0009987,GO:0016301,GO:0016310,GO:0016740,GO:0016772,GO:0016776,GO:0019205,GO:0019637,GO:0034641,GO:0044237,GO:0044238,GO:0044281,GO:0044464,GO:0046483,GO:0046939,GO:0055086,GO:0071704,GO:0072521,GO:0072527,GO:1901360,GO:1901564 2.7.4.6 0.00000000000000000000000000000000000000000000001064 184.0
DYD2_k127_3564440_6 Belongs to the peptidase M16 family - GO:0005575,GO:0005623,GO:0005886,GO:0016020,GO:0044464,GO:0071944 - 0.000000000000000000000000000000000000000001315 164.0
DYD2_k127_3564440_7 Necessary for efficient RNA polymerase transcription elongation past template-encoded arresting sites. The arresting sites in DNA have the property of trapping a certain fraction of elongating RNA polymerases that pass through, resulting in locked ternary complexes. Cleavage of the nascent transcript by cleavage factors such as GreA or GreB allows the resumption of elongation from the new 3'terminus. GreA releases sequences of 2 to 3 nucleotides K03624 - - 0.000000000000000000000000000000000000005054 151.0
DYD2_k127_3564440_8 Predicted membrane protein (DUF2177) - - - 0.00000000000000000000000000000000001702 146.0
DYD2_k127_3564440_9 Belongs to the peptidase S26 family K03100 - 3.4.21.89 0.00000000000000000000000000000008131 141.0
DYD2_k127_3629921_0 Cys/Met metabolism PLP-dependent enzyme K00639 GO:0003674,GO:0003824,GO:0005488,GO:0006082,GO:0006732,GO:0006766,GO:0006767,GO:0006768,GO:0006790,GO:0006807,GO:0008144,GO:0008150,GO:0008152,GO:0008710,GO:0008890,GO:0009058,GO:0009102,GO:0009108,GO:0009110,GO:0009987,GO:0016053,GO:0016407,GO:0016408,GO:0016453,GO:0016740,GO:0016746,GO:0016747,GO:0017144,GO:0018130,GO:0019752,GO:0019842,GO:0030170,GO:0032787,GO:0034641,GO:0036094,GO:0042364,GO:0043167,GO:0043168,GO:0043436,GO:0043603,GO:0043604,GO:0044237,GO:0044249,GO:0044271,GO:0044272,GO:0044281,GO:0044283,GO:0046394,GO:0046483,GO:0048037,GO:0050662,GO:0051186,GO:0051188,GO:0070279,GO:0071704,GO:0072330,GO:0097159,GO:1901360,GO:1901362,GO:1901363,GO:1901564,GO:1901566,GO:1901576 2.3.1.29 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000128 519.0
DYD2_k127_3629921_1 Glucose dehydrogenase C-terminus - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008845 371.0
DYD2_k127_3629921_2 PFAM Bacterial extracellular solute-binding protein K15770 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002628 347.0
DYD2_k127_3629921_3 periplasmic binding protein LacI transcriptional regulator K01775 - 5.1.1.1 0.000000000000000000000000000000000000000000000000000000000000000000000000001562 266.0
DYD2_k127_3629921_4 PFAM fumarylacetoacetate (FAA) hydrolase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000001076 250.0
DYD2_k127_3629921_5 Domain of unknown function DUF11 - - - 0.00000000000000000000000000000000000000000000000000000000000327 239.0
DYD2_k127_3629921_6 TIGRFAM RNA polymerase sigma factor, sigma-70 family K03088 - - 0.000000000000000000000000006429 120.0
DYD2_k127_3629921_7 PFAM Binding-protein-dependent transport system inner membrane component K02025,K15771 - - 0.000000000000000000000008355 102.0
DYD2_k127_3629921_8 PFAM Binding-protein-dependent transport system inner membrane component K02025,K15771 - - 0.00000000000000001388 87.0
DYD2_k127_3689531_0 Catalyzes the decarboxylation of four acetate groups of uroporphyrinogen-III to yield coproporphyrinogen-III K01599 GO:0003674,GO:0003824,GO:0004853,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006725,GO:0006778,GO:0006779,GO:0006783,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009987,GO:0016829,GO:0016830,GO:0016831,GO:0018130,GO:0019438,GO:0033013,GO:0033014,GO:0034641,GO:0042168,GO:0042440,GO:0044237,GO:0044249,GO:0044271,GO:0044424,GO:0044444,GO:0044464,GO:0046148,GO:0046483,GO:0051186,GO:0051188,GO:0071704,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576 4.1.1.37 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002431 480.0
DYD2_k127_3689531_1 Aminotransferase class-III K01845 - 5.4.3.8 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004301 475.0
DYD2_k127_3689531_2 Belongs to the ALAD family K01698 - 4.2.1.24 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002991 381.0
DYD2_k127_3689531_3 Catalyzes the ferrous insertion into protoporphyrin IX K01772 - 4.99.1.1,4.99.1.9 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003196 341.0
DYD2_k127_3689531_4 PFAM Chlorite dismutase - - - 0.0000000000000000000000000000000000000000000000000000000000000005561 226.0
DYD2_k127_3689531_5 Tetrapolymerization of the monopyrrole PBG into the hydroxymethylbilane pre-uroporphyrinogen in several discrete steps K01749 - 2.5.1.61 0.00000000000000000000000000000000000000000000000000000000402 211.0
DYD2_k127_3689531_6 Uroporphyrinogen-III synthase HemD K01719,K13542 GO:0003674,GO:0003824,GO:0004851,GO:0006725,GO:0006778,GO:0006779,GO:0006783,GO:0006807,GO:0008150,GO:0008152,GO:0008168,GO:0008169,GO:0008757,GO:0009058,GO:0009987,GO:0016740,GO:0016741,GO:0018130,GO:0019354,GO:0019438,GO:0032259,GO:0033013,GO:0033014,GO:0034641,GO:0042168,GO:0042440,GO:0044237,GO:0044249,GO:0044271,GO:0046148,GO:0046156,GO:0046483,GO:0051186,GO:0051188,GO:0071704,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576 2.1.1.107,4.2.1.75 0.000000000000000000000000000000003487 138.0
DYD2_k127_3689531_7 Catalyzes the NADPH-dependent reduction of glutamyl- tRNA(Glu) to glutamate 1-semialdehyde (GSA) K02492 - 1.2.1.70 0.0000000000000000000000000000001018 139.0
DYD2_k127_3689531_8 Methyltransferase domain - - - 0.000000003114 61.0
DYD2_k127_3697433_0 Aldehyde dehydrogenase family K00135 - 1.2.1.16,1.2.1.20,1.2.1.79 2.79e-247 768.0
DYD2_k127_3697433_1 Involved in the TCA cycle. Catalyzes the stereospecific interconversion of fumarate to L-malate K01679 GO:0003674,GO:0003824,GO:0004333,GO:0005575,GO:0005576,GO:0005618,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005886,GO:0006082,GO:0006091,GO:0006099,GO:0006101,GO:0006106,GO:0006108,GO:0008150,GO:0008152,GO:0009060,GO:0009987,GO:0015980,GO:0016020,GO:0016829,GO:0016835,GO:0016836,GO:0016999,GO:0017144,GO:0019752,GO:0030312,GO:0040007,GO:0043436,GO:0043648,GO:0044237,GO:0044238,GO:0044281,GO:0044424,GO:0044444,GO:0044464,GO:0045333,GO:0055114,GO:0071704,GO:0071944,GO:0072350 4.2.1.2 3.923e-235 734.0
DYD2_k127_3697433_10 Pfam:DUF59 - - - 0.000000000001018 71.0
DYD2_k127_3697433_11 - - - - 0.000000003555 64.0
DYD2_k127_3697433_12 Polyketide cyclase / dehydrase and lipid transport - - - 0.0001707 49.0
DYD2_k127_3697433_2 Belongs to the aldehyde dehydrogenase family K22187 - - 3.903e-195 627.0
DYD2_k127_3697433_3 Alpha-amylase domain K01182,K01187,K01226 - 3.2.1.10,3.2.1.20,3.2.1.93 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001677 611.0
DYD2_k127_3697433_4 Adenylyl- / guanylyl cyclase, catalytic domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001403 423.0
DYD2_k127_3697433_5 Polysaccharide deacetylase - - - 0.00000000000000000000000000000000000000000005069 175.0
DYD2_k127_3697433_6 adenosyltransferase K00798 - 2.5.1.17 0.0000000000000000000000000000000000009765 145.0
DYD2_k127_3697433_7 Peptidase S16, lon domain protein K01338,K07157 - 3.4.21.53 0.00000000000000000000000000000000001077 145.0
DYD2_k127_3697433_8 N-acetylglucosaminylinositol deacetylase activity K22135 - - 0.00000000000000000000000000004126 125.0
DYD2_k127_3697433_9 Domain of unknown function (DUF309) K09763 - - 0.0000000000000000005269 93.0
DYD2_k127_3732938_0 3-oxoacyl-[acyl-carrier-protein] synthase activity K09458 - 2.3.1.179 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002414 419.0
DYD2_k127_3732938_1 Insulinase (Peptidase family M16) - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001901 327.0
DYD2_k127_3732938_2 geranylgeranyl reductase activity K21401 - 1.3.99.38 0.00000000000000000000000000000000000000000000000000000000000000000003607 243.0
DYD2_k127_3732938_3 negative regulation of translational initiation K05554,K15885 - - 0.000000000000000000000000000000000002504 151.0
DYD2_k127_3744805_0 Beta-lactamase superfamily domain - - - 0.0000000000000000000000000000000000000000000000000000000000001836 219.0
DYD2_k127_3744805_1 Domain of unknown function DUF11 - - - 0.00000000000000000000000000000000000000000000288 182.0
DYD2_k127_3744805_2 domain protein - - - 0.00000001016 66.0
DYD2_k127_3758139_0 FeS assembly protein SufB K07033,K09014 GO:0003674,GO:0003824,GO:0004518,GO:0004519,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006139,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0009987,GO:0016787,GO:0016788,GO:0034641,GO:0040007,GO:0043170,GO:0044237,GO:0044238,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0071704,GO:0090304,GO:0090305,GO:1901360 - 2.919e-231 725.0
DYD2_k127_3758139_1 Catalyzes the removal of elemental sulfur and selenium atoms from L-cysteine, L-cystine, L-selenocysteine, and L- selenocystine to produce L-alanine K11717 - 2.8.1.7,4.4.1.16 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004078 479.0
DYD2_k127_3758139_10 Protein conserved in bacteria - - - 0.000000000000000000000000000000000000000000000000000000000005483 236.0
DYD2_k127_3758139_11 pyridine nucleotide-disulphide oxidoreductase K00529 - 1.18.1.3 0.00000000000000000000000000000000000000000000000000000000005455 224.0
DYD2_k127_3758139_12 SUF system FeS assembly protein, NifU family K04488 - - 0.000000000000000000000000000000000007241 143.0
DYD2_k127_3758139_13 Thiolesterase that catalyzes the hydrolysis of S-D- lactoyl-glutathione to form glutathione and D-lactic acid - - - 0.000000000000000000000000000001262 130.0
DYD2_k127_3758139_14 Transcriptional regulator - - - 0.0000000000000000000000000005133 121.0
DYD2_k127_3758139_15 PFAM thiamineS protein K03636 - - 0.00000000000000000000000002365 117.0
DYD2_k127_3758139_16 cyclic nucleotide binding K10914 - - 0.00000000000000000000000002619 115.0
DYD2_k127_3758139_17 Belongs to the sigma-70 factor family. ECF subfamily - - - 0.0000000000000000000000001689 115.0
DYD2_k127_3758139_18 PFAM Rieske 2Fe-2S domain K05710 - - 0.0000000000000002659 85.0
DYD2_k127_3758139_19 Pyridoxal-phosphate dependent enzyme K12339,K21148 - 2.5.1.113,2.5.1.47 0.00000000001037 68.0
DYD2_k127_3758139_2 PFAM AMP-dependent synthetase K01897 - 6.2.1.3 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004529 459.0
DYD2_k127_3758139_20 - - - - 0.0000000318 64.0
DYD2_k127_3758139_3 PFAM UBA THIF-type NAD FAD binding protein K21029,K21147 - 2.7.7.80,2.8.1.11 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009359 403.0
DYD2_k127_3758139_4 Adenylyl- / guanylyl cyclase, catalytic domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002626 403.0
DYD2_k127_3758139_5 One of several proteins that assist in the late maturation steps of the functional core of the 30S ribosomal subunit. Helps release RbfA from mature subunits. May play a role in the assembly of ribosomal proteins into the subunit. Circularly permuted GTPase that catalyzes slow GTP hydrolysis, GTPase activity is stimulated by the 30S ribosomal subunit K06949 - 3.1.3.100 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004011 353.0
DYD2_k127_3758139_6 PFAM ABC transporter related K09013 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001384 325.0
DYD2_k127_3758139_7 Subtilase family K14743 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000003421 294.0
DYD2_k127_3758139_8 Uncharacterized protein family (UPF0051) K09015 - - 0.000000000000000000000000000000000000000000000000000000000000000000000007999 258.0
DYD2_k127_3758139_9 PA domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000004426 262.0
DYD2_k127_376020_0 Two component, sigma54 specific, transcriptional regulator, Fis family - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003606 468.0
DYD2_k127_376020_1 beta-lactamase domain protein K13075 - 3.1.1.81 0.000000000000000000000000000000000000000000000000000000000000005528 225.0
DYD2_k127_376020_2 Transmembrane secretion effector - - - 0.000000000000000000000000000000000000000000000000000000000006797 231.0
DYD2_k127_376020_3 Catalyzes the methyl esterification of L-isoaspartyl residues in peptides and proteins that result from spontaneous decomposition of normal L-aspartyl and L-asparaginyl residues. It plays a role in the repair and or degradation of damaged proteins K00573 - 2.1.1.77 0.00000000000000000001199 97.0
DYD2_k127_376020_4 Family of unknown function (DUF5317) - - - 0.000000000000008903 88.0
DYD2_k127_376546_0 - - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000007053 268.0
DYD2_k127_376546_1 COG1028 Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) K18009 - 1.1.1.304,1.1.1.76 0.0000000000000000000000000000001557 133.0
DYD2_k127_376546_2 - - - - 0.00000000000002216 81.0
DYD2_k127_376546_3 RNA polymerase sigma factor, sigma-70 family - - - 0.0000000001077 69.0
DYD2_k127_3791300_0 DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates K03043 GO:0000428,GO:0005575,GO:0005622,GO:0005623,GO:0030880,GO:0032991,GO:0044424,GO:0044464,GO:0061695,GO:1902494,GO:1990234 2.7.7.6 0.0 1209.0
DYD2_k127_3791300_1 DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates K03046 GO:0000428,GO:0005575,GO:0005622,GO:0005623,GO:0030880,GO:0032991,GO:0044424,GO:0044464,GO:0061695,GO:1902494,GO:1990234 2.7.7.6 1.211e-263 826.0
DYD2_k127_3807750_0 glutamine synthetase K01915 - 6.3.1.2 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005408 591.0
DYD2_k127_3807750_1 aromatic amino acid beta-eliminating lyase threonine aldolase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000786 419.0
DYD2_k127_3807750_10 Phosphorolytic exoribonuclease that removes nucleotide residues following the -CCA terminus of tRNA and adds nucleotides to the ends of RNA molecules by using nucleoside diphosphates as substrates K00989 GO:0006139,GO:0006401,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0009056,GO:0009057,GO:0009987,GO:0016070,GO:0016072,GO:0016075,GO:0019439,GO:0034641,GO:0034655,GO:0034660,GO:0034661,GO:0043170,GO:0044237,GO:0044238,GO:0044248,GO:0044260,GO:0044265,GO:0044270,GO:0046483,GO:0046700,GO:0071704,GO:0090304,GO:1901360,GO:1901361,GO:1901575 2.7.7.56 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000001686 281.0
DYD2_k127_3807750_11 TIGRFAM MazG family protein K02499 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000003117 264.0
DYD2_k127_3807750_12 Glycosyl transferase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000003925 254.0
DYD2_k127_3807750_13 UDP-N-acetylglucosamine 2-epimerase K08068,K18429 - 3.2.1.183,3.2.1.184 0.00000000000000000000000000000000000000000000000000000000000000000000000197 261.0
DYD2_k127_3807750_14 Glycosyltransferase like family 2 K00721 - 2.4.1.83 0.00000000000000000000000000000000000000000000000000000000000000000000127 250.0
DYD2_k127_3807750_15 Glycosyltransferase, group 4 family K02851 - 2.7.8.33,2.7.8.35 0.000000000000000000000000000000000000000000000000000000000000000001018 238.0
DYD2_k127_3807750_16 PFAM transferase hexapeptide repeat containing protein - - - 0.00000000000000000000000000000000000000000000000000000000000002713 220.0
DYD2_k127_3807750_17 Glycosyl transferase 4-like domain - - - 0.0000000000000000000000000000000000000000000000000000000001205 219.0
DYD2_k127_3807750_18 Catalyzes the hydrolysis of inorganic pyrophosphate (PPi) forming two phosphate ions K01507 - 3.6.1.1 0.00000000000000000000000000000000000000000000000000000008541 205.0
DYD2_k127_3807750_19 Bacterial sugar transferase K13012 - - 0.00000000000000000000000000000000000000000000003053 183.0
DYD2_k127_3807750_2 Belongs to the UDP-glucose GDP-mannose dehydrogenase family K02472,K13015 - 1.1.1.136,1.1.1.336 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002593 423.0
DYD2_k127_3807750_20 Cytidylyltransferase K00983 - 2.7.7.43 0.0000000000000000000000000000000000000004165 161.0
DYD2_k127_3807750_21 cell envelope-related transcriptional attenuator - - - 0.00000000000000000000000000000000000004376 160.0
DYD2_k127_3807750_22 Bacterial transferase hexapeptide (six repeats) - - - 0.0000000000000000000000000000000000003113 152.0
DYD2_k127_3807750_23 DinB superfamily - - - 0.0000000000000000000000000000000002506 140.0
DYD2_k127_3807750_24 response regulator receiver K03413 - - 0.000000000000000000000000000000008678 145.0
DYD2_k127_3807750_25 Pyrophosphatase that catalyzes the hydrolysis of nucleoside triphosphates to their monophosphate derivatives, with a high preference for the non-canonical purine nucleotides XTP (xanthosine triphosphate), dITP (deoxyinosine triphosphate) and ITP. Seems to function as a house-cleaning enzyme that removes non-canonical purine nucleotides from the nucleotide pool, thus preventing their incorporation into DNA RNA and avoiding chromosomal lesions K02428 GO:0003674,GO:0003824,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006139,GO:0006725,GO:0006753,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0009056,GO:0009058,GO:0009141,GO:0009143,GO:0009987,GO:0016462,GO:0016787,GO:0016817,GO:0016818,GO:0018130,GO:0019438,GO:0019439,GO:0019637,GO:0034404,GO:0034641,GO:0034654,GO:0034655,GO:0044237,GO:0044238,GO:0044248,GO:0044249,GO:0044270,GO:0044271,GO:0044281,GO:0044283,GO:0044424,GO:0044444,GO:0044464,GO:0046434,GO:0046483,GO:0046700,GO:0047429,GO:0055086,GO:0071704,GO:1901292,GO:1901360,GO:1901361,GO:1901362,GO:1901575,GO:1901576 3.6.1.66 0.0000000000000000000000000000002824 137.0
DYD2_k127_3807750_26 Involved in formation and maintenance of cell shape K03570 - - 0.0000000000000000000000000002077 125.0
DYD2_k127_3807750_27 polysaccharide biosynthetic process - - - 0.000000000000000000000000002004 129.0
DYD2_k127_3807750_28 cell envelope-related transcriptional attenuator - - - 0.000000000000000000000000002634 127.0
DYD2_k127_3807750_29 Chaperone involved in the correct folding and assembly of outer membrane proteins. Recognizes specific patterns of aromatic residues and the orientation of their side chains, which are found more frequently in integral outer membrane proteins. May act in both early periplasmic and late outer membrane-associated steps of protein maturation K03771 - 5.2.1.8 0.0000000000000000000001573 113.0
DYD2_k127_3807750_3 Belongs to the DegT DnrJ EryC1 family K12452,K13010 - 1.17.1.1,2.6.1.102 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002393 394.0
DYD2_k127_3807750_30 Cell envelope-related transcriptional attenuator domain - - - 0.00000000000000000001398 103.0
DYD2_k127_3807750_31 Glycosyl hydrolases family 18 - - - 0.000000000000000004022 100.0
DYD2_k127_3807750_32 PFAM O-antigen polymerase K18814 - - 0.000000000000005069 88.0
DYD2_k127_3807750_33 Subtilase family - - - 0.00000000001981 77.0
DYD2_k127_3807750_34 D-glucuronyl C5-epimerase C-terminus - - - 0.0000000000363 74.0
DYD2_k127_3807750_35 TIGRFAM Outer membrane protein K13735,K20276 - - 0.00000001983 68.0
DYD2_k127_3807750_36 N-Acetylmuramoyl-L-alanine amidase - - - 0.0000005401 64.0
DYD2_k127_3807750_38 PucR C-terminal helix-turn-helix domain - - - 0.0009758 51.0
DYD2_k127_3807750_4 Belongs to the UDP-N-acetylglucosamine 2-epimerase family K01791,K13019 - 5.1.3.14,5.1.3.23 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001098 391.0
DYD2_k127_3807750_5 TIGRFAM cell shape determining protein, MreB Mrl family K03569 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004558 374.0
DYD2_k127_3807750_6 NeuB family K01654,K18430 - 2.5.1.101,2.5.1.56 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001425 327.0
DYD2_k127_3807750_7 PFAM Cys Met metabolism pyridoxal-phosphate-dependent protein K01758,K01761 - 4.4.1.1,4.4.1.11 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003191 322.0
DYD2_k127_3807750_8 PFAM oxidoreductase domain protein - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001795 318.0
DYD2_k127_3807750_9 NAD(P)H-binding - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003103 317.0
DYD2_k127_3826798_0 Domain of unknown function (DUF4162) K01990 - - 0.00000000000000000000000000000000000000000000000000000000000000000000001964 257.0
DYD2_k127_3826798_1 Transcriptional - - - 0.0000000000000000000000002271 108.0
DYD2_k127_3826798_2 COG1277 ABC-type transport system involved in multi-copper enzyme maturation, permease component K01992 - - 0.0000000000000002215 90.0
DYD2_k127_3826798_3 Phospholipase_D-nuclease N-terminal - - - 0.0000000001513 63.0
DYD2_k127_3826798_4 Tetratricopeptide repeat - - - 0.000001493 56.0
DYD2_k127_3836243_0 PFAM AMP-dependent synthetase and ligase K01897 - 6.2.1.3 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001689 508.0
DYD2_k127_3836243_1 Acyl-CoA dehydrogenase, N-terminal domain K00248,K00249 - 1.3.8.1,1.3.8.7 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001425 399.0
DYD2_k127_3836243_2 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain K00074 - 1.1.1.157 0.0000000000000000000000000000000000000000000000000000000000005178 213.0
DYD2_k127_3836243_3 Belongs to the thiolase family K00626 - 2.3.1.9 0.00000000000000000000000000000000000000001024 161.0
DYD2_k127_3859646_0 N-acetylglucosaminylinositol deacetylase activity K18455 - 3.5.1.115 0.00000000000000000000000000000000000000000000000000000000000006258 226.0
DYD2_k127_3859646_1 EamA-like transporter family - - - 0.00000000000000000000000000000000000000000009152 174.0
DYD2_k127_3859646_2 PFAM Patatin K07001 GO:0003674,GO:0003824,GO:0016787 - 0.0000000000000000000000000001945 126.0
DYD2_k127_3859646_3 PFAM Nitrilase cyanide hydratase and apolipoprotein N-acyltransferase K01431 - 3.5.1.6 0.00000000000000000000000002683 114.0
DYD2_k127_3859646_4 PFAM Nitroreductase - - - 0.000000000000000000000000713 118.0
DYD2_k127_3859646_5 Belongs to the sigma-70 factor family. ECF subfamily K03088 - - 0.000000000000000000001731 102.0
DYD2_k127_3859646_6 Protein of unknown function (DUF971) K03593 - - 0.000000000000009555 78.0
DYD2_k127_3862734_0 PFAM Rieske 2Fe-2S domain protein K00479,K00499,K05708 - 1.14.12.19,1.14.15.7 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005846 486.0
DYD2_k127_3862734_1 Adenylyl- / guanylyl cyclase, catalytic domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003754 409.0
DYD2_k127_3862734_2 Integral membrane protein TerC family K05794 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002125 342.0
DYD2_k127_3862734_3 Polyketide cyclase / dehydrase and lipid transport - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001415 345.0
DYD2_k127_3862734_4 Adenylate cyclase, family 3 (some proteins contain HAMP domain) K01768 - 4.6.1.1 0.000000000000000000000000000000000000000000000000000000000001143 218.0
DYD2_k127_3862734_5 Nitrilase cyanide hydratase and apolipoprotein N-acyltransferase K11206 - - 0.00000000000000000002168 105.0
DYD2_k127_389016_0 zinc transporter K07238 - - 0.0000000000000000000000000000000000000000000000000000000000001836 219.0
DYD2_k127_389016_1 Non-essential cell division protein that could be required for efficient cell constriction - - - 0.000000000000005299 88.0
DYD2_k127_389016_2 -acetyltransferase - - - 0.000000001124 66.0
DYD2_k127_3900605_0 Belongs to the peptidase M50B family - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003459 312.0
DYD2_k127_3900605_1 Amidohydrolase family K12960 - 3.5.4.28,3.5.4.31 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000119 287.0
DYD2_k127_3900605_2 Acetyltransferase (GNAT) domain K00663 - 2.3.1.82 0.0000000000000000000000000000000000000000000000000000000003235 208.0
DYD2_k127_3900605_3 TIGRFAM molybdenum cofactor synthesis domain K03750 GO:0003674,GO:0003824,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006139,GO:0006163,GO:0006464,GO:0006725,GO:0006732,GO:0006753,GO:0006777,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009108,GO:0009116,GO:0009117,GO:0009119,GO:0009141,GO:0009144,GO:0009150,GO:0009199,GO:0009205,GO:0009259,GO:0009987,GO:0016740,GO:0016772,GO:0016779,GO:0018130,GO:0018315,GO:0019538,GO:0019637,GO:0019693,GO:0019720,GO:0032324,GO:0034641,GO:0036211,GO:0042040,GO:0042278,GO:0043170,GO:0043412,GO:0043545,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044281,GO:0044424,GO:0044464,GO:0046039,GO:0046128,GO:0046483,GO:0051186,GO:0051188,GO:0051189,GO:0055086,GO:0061598,GO:0061599,GO:0070566,GO:0071704,GO:0072521,GO:0090407,GO:1901068,GO:1901135,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576,GO:1901657 2.10.1.1 0.00000000000000000000000000000000000000000001404 173.0
DYD2_k127_3900605_4 MoeA domain protein domain I and II K00963,K03750 GO:0003674,GO:0003824,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005886,GO:0006139,GO:0006163,GO:0006464,GO:0006725,GO:0006732,GO:0006753,GO:0006777,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009108,GO:0009116,GO:0009117,GO:0009119,GO:0009141,GO:0009144,GO:0009150,GO:0009199,GO:0009205,GO:0009259,GO:0009987,GO:0016020,GO:0016740,GO:0016772,GO:0016779,GO:0018130,GO:0018315,GO:0019538,GO:0019637,GO:0019693,GO:0019720,GO:0032324,GO:0034641,GO:0036211,GO:0042040,GO:0042278,GO:0043170,GO:0043412,GO:0043545,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044281,GO:0044424,GO:0044444,GO:0044464,GO:0046039,GO:0046128,GO:0046483,GO:0051186,GO:0051188,GO:0051189,GO:0055086,GO:0061598,GO:0061599,GO:0070566,GO:0071704,GO:0071944,GO:0072521,GO:0090407,GO:1901068,GO:1901135,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576,GO:1901657 2.10.1.1,2.7.7.9 0.00000000000000000000000000000000000002319 149.0
DYD2_k127_3900605_5 Catalyzes the conversion of (8S)-3',8-cyclo-7,8- dihydroguanosine 5'-triphosphate to cyclic pyranopterin monophosphate (cPMP) K03637 - 4.6.1.17 0.000000000000000000000000000000000002716 151.0
DYD2_k127_3900605_7 Mycobacterial 4 TMS phage holin, superfamily IV K08972 - - 0.00000000000000003192 87.0
DYD2_k127_3900605_8 TIGRFAM integral membrane protein TIGR01906 - - - 0.00000000004664 74.0
DYD2_k127_390341_0 Oxidoreductase required for the transfer of electrons from pyruvate to flavodoxin K03737 - 1.2.7.1 1.053e-220 702.0
DYD2_k127_390341_1 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain K03737 - 1.2.7.1 1.338e-208 664.0
DYD2_k127_390341_2 VIT family - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008822 419.0
DYD2_k127_390341_3 Alcohol dehydrogenase GroES-like domain K13953 - 1.1.1.1 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005029 325.0
DYD2_k127_390341_4 Belongs to the small heat shock protein (HSP20) family K13993 - - 0.00000000000000000000000000004595 121.0
DYD2_k127_390341_5 signal transduction protein with CBS domains K07744 - - 0.000000000000000003824 91.0
DYD2_k127_390341_6 cheY-homologous receiver domain - - - 0.000000000000005072 87.0
DYD2_k127_3983758_0 elongation factor G K02355 - - 6.059e-197 636.0
DYD2_k127_3983758_1 tRNA synthetases class I (W and Y) K01866 GO:0003674,GO:0003824,GO:0004812,GO:0004831,GO:0005575,GO:0005618,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005886,GO:0006082,GO:0006139,GO:0006399,GO:0006520,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0009987,GO:0016020,GO:0016070,GO:0016874,GO:0016875,GO:0019752,GO:0030312,GO:0034641,GO:0034660,GO:0040007,GO:0043038,GO:0043039,GO:0043170,GO:0043436,GO:0044237,GO:0044238,GO:0044281,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0071704,GO:0071944,GO:0090304,GO:0140098,GO:0140101,GO:1901360,GO:1901564 6.1.1.1 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003655 562.0
DYD2_k127_3983758_2 Endonuclease that is involved in the suppression of homologous recombination and may therefore have a key role in the control of bacterial genetic diversity K07456 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001018 420.0
DYD2_k127_3983758_3 PFAM glycosyl transferase, family 51 - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001143 353.0
DYD2_k127_3983758_4 transcriptional regulatory protein - GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0044424,GO:0044444,GO:0044464 - 0.00000003027 64.0
DYD2_k127_3987008_0 acetyl-CoA carboxylase, biotin carboxylase K01961 - 6.3.4.14,6.4.1.2 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001696 549.0
DYD2_k127_3987008_1 Catalyzes the condensation reaction of fatty acid synthesis by the addition to an acyl acceptor of two carbons from malonyl-ACP K09458 - 2.3.1.179 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001514 480.0
DYD2_k127_3987008_10 NUDIX domain - - - 0.00000000000000000000000000002698 130.0
DYD2_k127_3987008_11 COG0604 NADPH quinone reductase and related Zn-dependent oxidoreductases K14446 - 1.3.1.85 0.0000000000000000000000000001643 118.0
DYD2_k127_3987008_12 UPF0678 fatty acid-binding protein-like protein - GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0044424,GO:0044444,GO:0044464 - 0.00000000000000000000003174 107.0
DYD2_k127_3987008_13 first, biotin carboxylase catalyzes the carboxylation of the carrier protein and then the transcarboxylase transfers the carboxyl group to form malonyl-CoA K02160 - - 0.0000000000000000000001335 103.0
DYD2_k127_3987008_14 Belongs to the peptidase S26 family K03100 - 3.4.21.89 0.00000000001114 70.0
DYD2_k127_3987008_15 first, biotin carboxylase catalyzes the carboxylation of the carrier protein and then the transcarboxylase transfers the carboxyl group to form malonyl-CoA K02160 - - 0.000000001332 65.0
DYD2_k127_3987008_2 Catalyzes a reversible aldol reaction between acetaldehyde and D-glyceraldehyde 3-phosphate to generate 2-deoxy- D-ribose 5-phosphate K01619 - 4.1.2.4 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004002 432.0
DYD2_k127_3987008_3 Catalyzes the condensation reaction of fatty acid synthesis by the addition to an acyl acceptor of two carbons from malonyl-ACP. Catalyzes the first condensation reaction which initiates fatty acid synthesis and may therefore play a role in governing the total rate of fatty acid production. Possesses both acetoacetyl-ACP synthase and acetyl transacylase activities. Its substrate specificity determines the biosynthesis of branched- chain and or straight-chain of fatty acids K00648 - 2.3.1.180 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003052 352.0
DYD2_k127_3987008_4 Component of the acetyl coenzyme A carboxylase (ACC) complex. First, biotin carboxylase catalyzes the carboxylation of biotin on its carrier protein (BCCP) and then the CO(2) group is transferred by the carboxyltransferase to acetyl-CoA to form malonyl-CoA K01962 - 2.1.3.15,6.4.1.2 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000157 317.0
DYD2_k127_3987008_5 Enoyl-(Acyl carrier protein) reductase K00059 - 1.1.1.100 0.00000000000000000000000000000000000000000000000000000000000000000000000000000004013 279.0
DYD2_k127_3987008_6 DSBA-like thioredoxin domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000008405 246.0
DYD2_k127_3987008_7 TIGRFAM malonyl CoA-acyl carrier protein transacylase K00645 - 2.3.1.39 0.0000000000000000000000000000000000000000000000000000000000000000000002295 258.0
DYD2_k127_3987008_8 FabA-like domain K02372 - 4.2.1.59 0.0000000000000000000000000000000000000000000000000001728 190.0
DYD2_k127_3987008_9 Superoxide dismutase K00518 GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0044424,GO:0044464 1.15.1.1 0.000000000000000000000000000000000000000663 156.0
DYD2_k127_4039567_0 the enzyme from Thermus thermophilus is dimeric and binds a zinc ion that is coordinated by cysteine and histidine residues that are not found in all related proteins but is found in some thermophilic organisms K00958 - 2.7.7.4 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003108 510.0
DYD2_k127_4039567_1 Sodium:sulfate symporter transmembrane region - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004575 511.0
DYD2_k127_4039567_10 Bacterial Ig-like domain (group 3) - - - 0.0000000000000000000000000000000000000000006252 181.0
DYD2_k127_4039567_11 Hydrolase - - - 0.0000000000000000000000000000000000004052 162.0
DYD2_k127_4039567_12 transferase activity, transferring glycosyl groups K16703 - - 0.00000000000000000000000000000001193 136.0
DYD2_k127_4039567_13 alpha beta - - - 0.00000000000000000000000000002089 124.0
DYD2_k127_4039567_14 - - - - 0.0004005 46.0
DYD2_k127_4039567_2 D-isomer specific 2-hydroxyacid dehydrogenase catalytic region K00058 - 1.1.1.399,1.1.1.95 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001155 449.0
DYD2_k127_4039567_3 FAD binding domain K05712 - 1.14.13.127 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003254 431.0
DYD2_k127_4039567_4 Metallo-beta-lactamase superfamily - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003036 394.0
DYD2_k127_4039567_5 Putative cell wall binding repeat 2 - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001515 325.0
DYD2_k127_4039567_6 integral membrane protein - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002925 311.0
DYD2_k127_4039567_7 Catalyzes the synthesis of activated sulfate K00860 - 2.7.1.25 0.00000000000000000000000000000000000000000000000000000000000000000000004108 246.0
DYD2_k127_4039567_8 - - - - 0.000000000000000000000000000000000000000000000000000000000000000007959 237.0
DYD2_k127_4039567_9 DHH family K06881 - 3.1.13.3,3.1.3.7 0.000000000000000000000000000000000000000000000000000001215 203.0
DYD2_k127_4045900_0 The UvrABC repair system catalyzes the recognition and processing of DNA lesions. UvrA is an ATPase and a DNA-binding protein. A damage recognition complex composed of 2 UvrA and 2 UvrB subunits scans DNA for abnormalities. When the presence of a lesion has been verified by UvrB, the UvrA molecules dissociate K03701 - - 0.0 1342.0
DYD2_k127_4045900_1 Kelch motif - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000004685 299.0
DYD2_k127_4045900_2 deaminated base DNA N-glycosylase activity K03648,K21929 - 3.2.2.27 0.000000000000000001024 91.0
DYD2_k127_4074794_0 Fumarate reductase flavoprotein C-term K00239 - 1.3.5.1,1.3.5.4 1.379e-235 746.0
DYD2_k127_4074794_1 Isocitrate/isopropylmalate dehydrogenase K00030 - 1.1.1.41 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001026 475.0
DYD2_k127_4074794_10 Belongs to the MraZ family K03925 - - 0.000000000000000000000000000000000000001862 151.0
DYD2_k127_4074794_11 PFAM ribonuclease H K03469,K06864 - 3.1.26.4 0.00000000000000000000000000000048 132.0
DYD2_k127_4074794_12 Succinate dehydrogenase/Fumarate reductase transmembrane subunit K00241 - - 0.0000000000000000000000006239 108.0
DYD2_k127_4074794_13 succinate dehydrogenase K00242 - - 0.000000000000000000000006177 113.0
DYD2_k127_4074794_14 Cell wall formation. Catalyzes the transfer of a GlcNAc subunit on undecaprenyl-pyrophosphoryl-MurNAc-pentapeptide (lipid intermediate I) to form undecaprenyl-pyrophosphoryl-MurNAc- (pentapeptide)GlcNAc (lipid intermediate II) K02563 - 2.4.1.227 0.0000000000000000001534 94.0
DYD2_k127_4074794_15 PFAM Sporulation and spore germination - - - 0.00001048 57.0
DYD2_k127_4074794_16 Essential cell division protein - - - 0.00007818 50.0
DYD2_k127_4074794_2 Succinyl-CoA synthetase functions in the citric acid cycle (TCA), coupling the hydrolysis of succinyl-CoA to the synthesis of either ATP or GTP and thus represents the only step of substrate-level phosphorylation in the TCA. The beta subunit provides nucleotide specificity of the enzyme and binds the substrate succinate, while the binding sites for coenzyme A and phosphate are found in the alpha subunit K01903 - 6.2.1.5 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009181 392.0
DYD2_k127_4074794_3 Penicillin-binding Protein dimerisation domain K03587 - 3.4.16.4 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002427 343.0
DYD2_k127_4074794_4 TIGRFAM succinate dehydrogenase and fumarate reductase iron-sulfur protein K00240 - 1.3.5.1,1.3.5.4 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002258 324.0
DYD2_k127_4074794_5 Involved in cell wall formation. Catalyzes the final step in the synthesis of UDP-N-acetylmuramoyl-pentapeptide, the precursor of murein K01929 - 6.3.2.10 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005763 333.0
DYD2_k127_4074794_6 Belongs to the SEDS family K03588 GO:0005575,GO:0005623,GO:0005886,GO:0016020,GO:0044464,GO:0071944 - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000001229 316.0
DYD2_k127_4074794_7 Specifically methylates the N4 position of cytidine in position 1402 (C1402) of 16S rRNA K03438 - 2.1.1.199 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000001482 289.0
DYD2_k127_4074794_8 Cell wall formation. Catalyzes the addition of glutamate to the nucleotide precursor UDP-N-acetylmuramoyl-L-alanine (UMA) K01925 - 6.3.2.9 0.00000000000000000000000000000000000000000000000000000000000000000000000003539 269.0
DYD2_k127_4074794_9 First step of the lipid cycle reactions in the biosynthesis of the cell wall peptidoglycan K01000 GO:0005575,GO:0005623,GO:0005886,GO:0016020,GO:0044464,GO:0071944 2.7.8.13 0.000000000000000000000000000000000000000000000000000000000000000000002451 258.0
DYD2_k127_4173331_0 Peptide chain release factor 2 directs the termination of translation in response to the peptide chain termination codons UGA and UAA K02836 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007906 395.0
DYD2_k127_4173331_1 cell division ATP-binding protein FtsE K09812 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000008266 285.0
DYD2_k127_4173331_2 Part of the Sec protein translocase complex. Interacts with the SecYEG preprotein conducting channel. Has a central role in coupling the hydrolysis of ATP to the transfer of proteins into and across the cell membrane, serving as an ATP-driven molecular motor driving the stepwise translocation of polypeptide chains across the membrane K03070 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000002027 273.0
DYD2_k127_4173331_3 Belongs to the peptidase S41A family K03797 - 3.4.21.102 0.00000000000000000000000000000000000000000000000000000000000000002373 242.0
DYD2_k127_4173331_4 Required for rescue of stalled ribosomes mediated by trans-translation. Binds to transfer-messenger RNA (tmRNA), required for stable association of tmRNA with ribosomes. tmRNA and SmpB together mimic tRNA shape, replacing the anticodon stem-loop with SmpB. tmRNA is encoded by the ssrA gene K03664 - - 0.0000000000000000000000000000000000000000000000000002142 188.0
DYD2_k127_4173331_5 PFAM Activator of Hsp90 ATPase 1 family protein - - - 0.00000000000000000000000000000000000000007056 164.0
DYD2_k127_4173331_6 Part of the ABC transporter FtsEX involved in asymmetric cellular division facilitating the initiation of sporulation K09811 - - 0.0000000000000000000000000000000002838 143.0
DYD2_k127_4196798_0 In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity K02335 - 2.7.7.7 6.741e-215 700.0
DYD2_k127_4196798_1 damaged site, the DNA wraps around one UvrB monomer. DNA wrap is dependent on ATP binding by UvrB and probably causes local melting of the DNA helix, facilitating insertion of UvrB beta-hairpin between the DNA strands. Then UvrB probes one DNA strand for the presence of a lesion. If a lesion is found the UvrA subunits dissociate and the UvrB-DNA preincision complex is formed. This complex is subsequently bound by UvrC and the second UvrB is released. If no lesion is found, the DNA wraps around the other UvrB subunit that will check the other stand for damage K03702 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000001894 265.0
DYD2_k127_4196798_2 Involved in base excision repair of DNA damaged by oxidation or by mutagenic agents. Acts as DNA glycosylase that recognizes and removes damaged bases. Has a preference for oxidized purines, such as 7,8-dihydro-8-oxoguanine (8-oxoG). Has AP (apurinic apyrimidinic) lyase activity and introduces nicks in the DNA strand. Cleaves the DNA backbone by beta-delta elimination to generate a single-strand break at the site of the removed base with both 3'- and 5'-phosphates K10563 - 3.2.2.23,4.2.99.18 0.0000000000000000000000000000000000000000000000000000000000000000000002383 251.0
DYD2_k127_4196798_3 PFAM sigma-70 region 2 domain protein K03088 - - 0.00000000000000000000000000000000000000000001999 169.0
DYD2_k127_4196798_4 Catalyzes the phosphorylation of the 3'-hydroxyl group of dephosphocoenzyme A to form coenzyme A K00859,K07566 GO:0003674,GO:0003824,GO:0004140,GO:0006139,GO:0006163,GO:0006164,GO:0006725,GO:0006732,GO:0006753,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009108,GO:0009117,GO:0009150,GO:0009152,GO:0009165,GO:0009259,GO:0009260,GO:0009987,GO:0015936,GO:0015937,GO:0016301,GO:0016310,GO:0016740,GO:0016772,GO:0016773,GO:0018130,GO:0019438,GO:0019637,GO:0019693,GO:0033865,GO:0033866,GO:0033875,GO:0034030,GO:0034032,GO:0034033,GO:0034641,GO:0034654,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0046390,GO:0046483,GO:0051186,GO:0051188,GO:0055086,GO:0071704,GO:0072521,GO:0072522,GO:0090407,GO:1901135,GO:1901137,GO:1901293,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576 2.7.1.24,2.7.7.87 0.00000000000000000000000000000001058 143.0
DYD2_k127_4196798_5 ATP binding to DnaK triggers the release of the substrate protein, thus completing the reaction cycle. Several rounds of ATP-dependent interactions between DnaJ, DnaK and GrpE are required for fully efficient folding. Also involved, together with DnaK and GrpE, in the DNA replication of plasmids through activation of initiation proteins K03686 - - 0.00000000000107 75.0
DYD2_k127_4196798_6 SAF K02279 - - 0.000000000141 71.0
DYD2_k127_4196798_7 COG2114 Adenylate cyclase, family 3 (some proteins contain HAMP domain) K01768 - 4.6.1.1 0.00000005125 57.0
DYD2_k127_4196798_8 PFAM TadE family protein - - - 0.0000008795 59.0
DYD2_k127_4196798_9 PFAM TadE family protein - - - 0.0002152 55.0
DYD2_k127_424915_0 PFAM Pyridine nucleotide-disulphide oxidoreductase K00384 - 1.8.1.9 1.47e-213 676.0
DYD2_k127_424915_1 The beta subunit is responsible for the synthesis of L- tryptophan from indole and L-serine K06001 - 4.2.1.20 6.512e-196 619.0
DYD2_k127_424915_10 Luciferase-like monooxygenase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004286 312.0
DYD2_k127_424915_11 O-methyltransferase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001768 309.0
DYD2_k127_424915_12 Has an important function as a repair enzyme for proteins that have been inactivated by oxidation. Catalyzes the reversible oxidation-reduction of methionine sulfoxide in proteins to methionine K07304 - 1.8.4.11 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000002971 299.0
DYD2_k127_424915_13 Transmembrane secretion effector - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000001614 308.0
DYD2_k127_424915_14 SMART ATP-binding region ATPase domain protein - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000001406 300.0
DYD2_k127_424915_15 ABC-2 family transporter protein K01992 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000009848 271.0
DYD2_k127_424915_16 Sulfite exporter TauE/SafE K07090 - - 0.000000000000000000000000000000000000000000000000000000000000000005342 235.0
DYD2_k127_424915_17 PFAM ABC-2 type transporter K01992 - - 0.000000000000000000000000000000000000000000000000000000000000000007606 233.0
DYD2_k127_424915_18 PFAM ABC transporter related K01990 - - 0.0000000000000000000000000000000000000000000000000000000000000000129 232.0
DYD2_k127_424915_19 PFAM DoxX family protein K16937 - 1.8.5.2 0.000000000000000000000000000000000000000000000000000000000000005528 225.0
DYD2_k127_424915_2 FAD dependent oxidoreductase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004428 446.0
DYD2_k127_424915_20 Metallo-beta-lactamase superfamily - - - 0.0000000000000000000000000000000000000000000000000000000000006861 219.0
DYD2_k127_424915_21 Thymidine kinase K00857 - 2.7.1.21 0.0000000000000000000000000000000000000000000000000000000000007551 216.0
DYD2_k127_424915_22 Belongs to the SOS response-associated peptidase family - - - 0.0000000000000000000000000000000000000000000000000003888 194.0
DYD2_k127_424915_23 peptidyl-tyrosine sulfation - - - 0.00000000000000000000000000000000000000000000199 172.0
DYD2_k127_424915_24 COGs COG2343 conserved - - - 0.000000000000000000000000000000000003095 140.0
DYD2_k127_424915_25 helix_turn_helix, Arsenical Resistance Operon Repressor - GO:0001067,GO:0003674,GO:0003676,GO:0003677,GO:0005488,GO:0006355,GO:0008150,GO:0009889,GO:0010468,GO:0010556,GO:0010565,GO:0019216,GO:0019217,GO:0019219,GO:0019222,GO:0031323,GO:0031326,GO:0043254,GO:0044087,GO:0044212,GO:0050789,GO:0050794,GO:0051128,GO:0051171,GO:0051252,GO:0060255,GO:0062012,GO:0065007,GO:0080090,GO:0090034,GO:0097159,GO:1901363,GO:1903506,GO:2000112,GO:2001141 - 0.000000000000000000000000000000000006099 139.0
DYD2_k127_424915_26 AAA domain K01090 - 3.1.3.16 0.0000000000000000000000000000000003105 143.0
DYD2_k127_424915_27 PFAM Polysaccharide pyruvyl transferase - - - 0.0000000000000000000000000000000004374 145.0
DYD2_k127_424915_28 - - - - 0.00000000000000000000000000000007343 130.0
DYD2_k127_424915_29 PFAM Activator of Hsp90 ATPase 1 family protein - - - 0.0000000000000000000000000000001191 134.0
DYD2_k127_424915_3 Phosphofructokinase K00850,K21071 - 2.7.1.11,2.7.1.90 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006425 441.0
DYD2_k127_424915_30 diguanylate cyclase - - - 0.0000000000000000000000000000005547 137.0
DYD2_k127_424915_31 Protein of unknown function (DUF1761) - - - 0.000000000000000000000000000001745 125.0
DYD2_k127_424915_33 negative regulation of transcription, DNA-templated - - - 0.000000000000000000000000002268 114.0
DYD2_k127_424915_34 - - - - 0.000000000000000000000000005278 112.0
DYD2_k127_424915_35 conserved protein, contains double-stranded beta-helix domain - - - 0.00000000000000000000003295 104.0
DYD2_k127_424915_36 Rieske 2Fe-2S - - - 0.000000000000000000001466 105.0
DYD2_k127_424915_37 Psort location Cytoplasmic, score - - - 0.000000000000000001326 96.0
DYD2_k127_424915_38 CBS domain - - - 0.00000000000003429 78.0
DYD2_k127_424915_39 helix_turn_helix multiple antibiotic resistance protein - - - 0.0000000000007889 75.0
DYD2_k127_424915_4 ABC transporter K01990 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007399 401.0
DYD2_k127_424915_40 LamG domain protein jellyroll fold domain protein - - - 0.000000000001575 81.0
DYD2_k127_424915_41 Non-essential cell division protein that could be required for efficient cell constriction - - - 0.0000000006847 72.0
DYD2_k127_424915_42 Cupin 2, conserved barrel domain protein - - - 0.00000001067 64.0
DYD2_k127_424915_44 VIT family - - - 0.00000122 57.0
DYD2_k127_424915_45 VanZ like family - - - 0.000001808 57.0
DYD2_k127_424915_46 - - - - 0.000078 52.0
DYD2_k127_424915_47 Lysylphosphatidylglycerol synthase TM region K07027 - - 0.000121 53.0
DYD2_k127_424915_5 CorA-like Mg2+ transporter protein K03284 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001989 383.0
DYD2_k127_424915_6 Multicopper oxidase K22348 - 1.16.3.3 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006696 371.0
DYD2_k127_424915_7 - - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000317 338.0
DYD2_k127_424915_8 Belongs to the pyruvate kinase family K00873 - 2.7.1.40 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000401 349.0
DYD2_k127_424915_9 Major facilitator Superfamily - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002396 324.0
DYD2_k127_4289713_0 Aspartyl-tRNA synthetase with relaxed tRNA specificity since it is able to aspartylate not only its cognate tRNA(Asp) but also tRNA(Asn). Reaction proceeds in two steps L-aspartate is first activated by ATP to form Asp-AMP and then transferred to the acceptor end of tRNA(Asp Asn) K01876 - 6.1.1.12 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001971 512.0
DYD2_k127_4289713_1 Master enzyme that delivers sulfur to a number of partners involved in Fe-S cluster assembly, tRNA modification or cofactor biosynthesis. Catalyzes the removal of elemental sulfur atoms from cysteine to produce alanine. Functions as a sulfur delivery protein for Fe-S cluster synthesis onto IscU, an Fe-S scaffold assembly protein, as well as other S acceptor proteins K04487 - 2.8.1.7 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000552 271.0
DYD2_k127_4289713_2 TRANSCRIPTIONal - - - 0.00000000000000000000000000000000000000000000000000001436 207.0
DYD2_k127_4289713_3 Cbs domain - - - 0.0000000000000000000000000000000000000000000000000001007 195.0
DYD2_k127_4289713_4 Catalyzes the circularization of gamma-N-acetyl- alpha,gamma-diaminobutyric acid (ADABA) to ectoine (1,4,5,6- tetrahydro-2-methyl-4-pyrimidine carboxylic acid), which is an excellent osmoprotectant K06720 - 4.2.1.108 0.00000000000000000000000000000000000005139 164.0
DYD2_k127_4302043_0 amidohydrolase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001935 536.0
DYD2_k127_4302043_1 Protein of unknown function (DUF2867) - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001791 496.0
DYD2_k127_4302043_10 PFAM Lysine exporter protein (LYSE YGGA) - - - 0.0000000000000000000000000000000000008676 146.0
DYD2_k127_4302043_11 YCII-related domain - - - 0.00000000000000000000000000000001046 130.0
DYD2_k127_4302043_12 Domain of unknown function (DU1801) - - - 0.000000000000000000000005199 114.0
DYD2_k127_4302043_13 Acetyltransferase (GNAT) domain - - - 0.0000000006316 66.0
DYD2_k127_4302043_14 - - - - 0.000008071 55.0
DYD2_k127_4302043_2 Aminotransferase K11358 - 2.6.1.1 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002755 423.0
DYD2_k127_4302043_3 alcohol dehydrogenase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001299 338.0
DYD2_k127_4302043_4 Domain of unknown function (DUF4389) - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000001366 252.0
DYD2_k127_4302043_5 Tetracyclin repressor, C-terminal all-alpha domain - - - 0.00000000000000000000000000000000000000000000000000000000000001589 227.0
DYD2_k127_4302043_6 EamA-like transporter family - - - 0.000000000000000000000000000000000000000000000000000000000004557 220.0
DYD2_k127_4302043_7 Luciferase-like monooxygenase - - - 0.00000000000000000000000000000000000000000000000000000000002011 231.0
DYD2_k127_4302043_8 Adenylyl- / guanylyl cyclase, catalytic domain - - - 0.0000000000000000000000000000000000000000000000000006255 198.0
DYD2_k127_4302043_9 EamA-like transporter family - - - 0.00000000000000000000000000000000000000000005202 179.0
DYD2_k127_4314504_0 Belongs to the IlvD Edd family K01687 GO:0003674,GO:0003824,GO:0004160,GO:0016829,GO:0016835,GO:0016836 4.2.1.9 2.398e-213 683.0
DYD2_k127_4314504_1 TIGRFAM acetolactate synthase, large subunit, biosynthetic type K01652 - 2.2.1.6 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001105 525.0
DYD2_k127_4314504_2 Catalyzes the isomerization between 2-isopropylmalate and 3-isopropylmalate, via the formation of 2-isopropylmaleate K01703 - 4.2.1.33,4.2.1.35 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001444 446.0
DYD2_k127_4314504_3 Involved in the biosynthesis of branched-chain amino acids (BCAA). Catalyzes an alkyl-migration followed by a ketol- acid reduction of (S)-2-acetolactate (S2AL) to yield (R)-2,3- dihydroxy-isovalerate. In the isomerase reaction, S2AL is rearranged via a Mg-dependent methyl migration to produce 3- hydroxy-3-methyl-2-ketobutyrate (HMKB). In the reductase reaction, this 2-ketoacid undergoes a metal-dependent reduction by NADPH to yield (R)-2,3-dihydroxy-isovalerate K00053 - 1.1.1.86 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006337 426.0
DYD2_k127_4314504_4 Pyridine nucleotide-disulphide oxidoreductase K07222 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001183 425.0
DYD2_k127_4314504_5 Cupin 2, conserved barrel domain protein - - - 0.00000000000000000000000000000000000000001452 164.0
DYD2_k127_4314504_6 Acetolactate synthase, small subunit K01653 - 2.2.1.6 0.0000000000000000000000000008203 130.0
DYD2_k127_4314504_7 - - - - 0.00000000000000000000004404 109.0
DYD2_k127_4328219_0 2-oxoglutarate dehydrogenase N-terminus K00164 - 1.2.4.2 1.172e-310 991.0
DYD2_k127_4328219_1 PFAM ABC transporter related K06158 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002348 543.0
DYD2_k127_4328219_10 Endoribonuclease L-PSP - - - 0.000000000000004927 75.0
DYD2_k127_4328219_11 Iron-sulfur cluster assembly accessory protein K13628 - - 0.00001582 54.0
DYD2_k127_4328219_2 Alkylhydroperoxidase AhpD family core domain protein - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000001038 259.0
DYD2_k127_4328219_3 PFAM Pyridoxal-5'-phosphate-dependent protein beta subunit K01754 - 4.3.1.19 0.00000000000000000000000000000000000000000000000000000000000000000003607 243.0
DYD2_k127_4328219_4 Acetyltransferase (GNAT) family - - - 0.0000000000000000000000000000000000000000000000000000000000000005925 228.0
DYD2_k127_4328219_5 CGNR zinc finger - - - 0.0000000000000000000000000000000001313 139.0
DYD2_k127_4328219_6 - - - - 0.00000000000000000000000000000001559 134.0
DYD2_k127_4328219_7 Antibiotic biosynthesis monooxygenase - - - 0.0000000000000000000000001692 109.0
DYD2_k127_4328219_8 Catalyzes the gamma-elimination of phosphate from L- phosphohomoserine and the beta-addition of water to produce L- threonine K01733 - 4.2.3.1 0.000000000000000000003525 106.0
DYD2_k127_4392_0 Belongs to the PEP-utilizing enzyme family K01006 - 2.7.9.1 0.0 1120.0
DYD2_k127_4392_1 Catalyzes the attachment of glycine to tRNA(Gly) K01880 - 6.1.1.14 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001472 562.0
DYD2_k127_4392_2 Xaa-Pro aminopeptidase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001561 501.0
DYD2_k127_4392_3 Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released. This sigma factor is the primary sigma factor during exponential growth K03086 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004791 407.0
DYD2_k127_4392_4 RNA polymerase that catalyzes the synthesis of short RNA molecules used as primers for DNA polymerase during DNA replication K02316 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005906 352.0
DYD2_k127_4392_5 OsmC-like protein - - - 0.00000000000000000000000000000000000000001115 160.0
DYD2_k127_4392_6 converts alpha-aldose to the beta-anomer K01785 GO:0003674,GO:0003824,GO:0004034,GO:0005975,GO:0005996,GO:0006006,GO:0006012,GO:0006950,GO:0006974,GO:0008150,GO:0008152,GO:0009056,GO:0009987,GO:0016052,GO:0016853,GO:0016854,GO:0016857,GO:0019318,GO:0019320,GO:0019388,GO:0033499,GO:0033554,GO:0044238,GO:0044281,GO:0044282,GO:0046365,GO:0050896,GO:0051716,GO:0071704,GO:1901575 5.1.3.3 0.00000000000000000000000006683 118.0
DYD2_k127_4392_7 Involved in DNA repair and RecF pathway recombination K03584 - - 0.000000000000000000001133 101.0
DYD2_k127_4392_8 peptidyl-tyrosine sulfation - - - 0.0001782 52.0
DYD2_k127_442196_0 PFAM Adenosine AMP deaminase K01488,K18286 - 3.5.4.4,3.5.4.40 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001591 419.0
DYD2_k127_442196_1 The RuvA-RuvB complex in the presence of ATP renatures cruciform structure in supercoiled DNA with palindromic sequence, indicating that it may promote strand exchange reactions in homologous recombination. RuvAB is a helicase that mediates the Holliday junction migration by localized denaturation and reannealing K03551 - 3.6.4.12 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002928 413.0
DYD2_k127_442196_2 Amidohydrolase family K06015 - 3.5.1.81 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001212 418.0
DYD2_k127_442196_3 Permease family K06901 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001717 404.0
DYD2_k127_442196_4 Catalyzes the base-exchange of a guanine (G) residue with the queuine precursor 7-aminomethyl-7-deazaguanine (PreQ1) at position 34 (anticodon wobble position) in tRNAs with GU(N) anticodons (tRNA-Asp, -Asn, -His and -Tyr). Catalysis occurs through a double-displacement mechanism. The nucleophile active site attacks the C1' of nucleotide 34 to detach the guanine base from the RNA, forming a covalent enzyme-RNA intermediate. The proton acceptor active site deprotonates the incoming PreQ1, allowing a nucleophilic attack on the C1' of the ribose to form the product. After dissociation, two additional enzymatic reactions on the tRNA convert PreQ1 to queuine (Q), resulting in the hypermodified nucleoside queuosine (7-(((4,5-cis-dihydroxy-2- cyclopenten-1-yl)amino)methyl)-7-deazaguanosine) K00773 - 2.4.2.29 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009099 396.0
DYD2_k127_442196_5 Transfers and isomerizes the ribose moiety from AdoMet to the 7-aminomethyl group of 7-deazaguanine (preQ1-tRNA) to give epoxyqueuosine (oQ-tRNA) K07568 - 2.4.99.17 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004602 344.0
DYD2_k127_442196_6 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily - - - 0.000000000000000000000000000000000000000003251 160.0
DYD2_k127_442196_7 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase K07141 - 2.7.7.76 0.000000000000000000004425 102.0
DYD2_k127_442196_8 - - - - 0.0000000007257 68.0
DYD2_k127_4477468_0 ATPase associated with various cellular K03924 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008674 440.0
DYD2_k127_4477468_1 Protein of unknown function DUF58 - - - 0.000000000000000000000000000000000000000000000000000000000006203 223.0
DYD2_k127_4477468_2 PFAM transglutaminase domain protein - - - 0.000000000000000000000000000000000000000000000000004863 206.0
DYD2_k127_4477468_3 Penicillin binding protein transpeptidase domain K05364 - - 0.00000000000004151 75.0
DYD2_k127_4506506_0 cytochrome C assembly protein K02195 - - 0.000000000000000000000000000000000000000000000000000002971 205.0
DYD2_k127_4506506_1 ABC-type transport system involved in cytochrome c biogenesis permease component K02194 - - 0.0000000000000000000000000000000000000000000000009704 189.0
DYD2_k127_4506506_2 ATPase activity K01990,K02193 - 3.6.3.41 0.000000000000000000000000000000000000000004561 170.0
DYD2_k127_4506506_3 Domain present in phytochromes and cGMP-specific phosphodiesterases. K08968 - 1.8.4.14 0.00000000000000000000000000000000000000001454 159.0
DYD2_k127_4506506_4 DNA-templated transcription, initiation K03088 - - 0.00000000000000000000000000000004239 138.0
DYD2_k127_4506506_5 PFAM helix-turn-helix HxlR type - - - 0.0000000000000000000001634 103.0
DYD2_k127_4506506_6 CHRD domain - - - 0.0000000000000000000001858 104.0
DYD2_k127_4506506_7 Cupredoxin-like domain - - - 0.000275 53.0
DYD2_k127_451597_0 Belongs to the ClpA ClpB family K03696 GO:0006950,GO:0008150,GO:0010035,GO:0010038,GO:0042221,GO:0046686,GO:0046688,GO:0050896,GO:0097501,GO:1990169,GO:1990170 - 0.0 1032.0
DYD2_k127_451597_1 PFAM oxidoreductase domain protein - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000707 528.0
DYD2_k127_451597_10 Belongs to the class IV-like SAM-binding methyltransferase superfamily. RNA methyltransferase TrmH family K03218 - 2.1.1.185 0.000000000000000000000000000000000000000000000000000006819 202.0
DYD2_k127_451597_11 Forms part of the ribosomal stalk which helps the ribosome interact with GTP-bound translation factors. Is thus essential for accurate translation K02935 - - 0.00000000000000000000000000000000000000000000006489 171.0
DYD2_k127_451597_12 - K11477 - - 0.00000000000000000000000000000000000002515 149.0
DYD2_k127_451597_13 Forms part of the ribosomal stalk, playing a central role in the interaction of the ribosome with GTP-bound translation factors K02864 - - 0.0000000000000000000000000002428 121.0
DYD2_k127_451597_14 Hemerythrin HHE cation binding domain - - - 0.000000000000000000000007472 110.0
DYD2_k127_451597_15 Belongs to the bacterial ribosomal protein bL33 family K02913 - - 0.000000000000000003218 87.0
DYD2_k127_451597_16 - - - - 0.0000009548 61.0
DYD2_k127_451597_17 Essential subunit of the Sec protein translocation channel SecYEG. Clamps together the 2 halves of SecY. May contact the channel plug during translocation K03073 GO:0005575,GO:0005618,GO:0005623,GO:0005886,GO:0005887,GO:0008150,GO:0016020,GO:0016021,GO:0030312,GO:0031224,GO:0031226,GO:0040007,GO:0044425,GO:0044459,GO:0044464,GO:0071944 - 0.000007581 49.0
DYD2_k127_451597_2 DNA-dependent ATPase involved in processing of recombination intermediates, plays a role in repairing DNA breaks. Stimulates the branch migration of RecA-mediated strand transfer reactions, allowing the 3' invading strand to extend heteroduplex DNA faster. Binds ssDNA in the presence of ADP but not other nucleotides, has ATPase activity that is stimulated by ssDNA and various branched DNA structures, but inhibited by SSB. Does not have RecA's homology-searching function K04485 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001079 402.0
DYD2_k127_451597_3 Pyruvate:ferredoxin oxidoreductase core domain II K00174 - 1.2.7.11,1.2.7.3 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006337 310.0
DYD2_k127_451597_4 Binds directly to 23S rRNA. The L1 stalk is quite mobile in the ribosome, and is involved in E site tRNA release K02863 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000003471 300.0
DYD2_k127_451597_5 SMART Nucleotide binding protein, PINc - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000002202 281.0
DYD2_k127_451597_6 Participates in transcription elongation, termination and antitermination K02601 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000002622 260.0
DYD2_k127_451597_7 Pyruvate ferredoxin/flavodoxin oxidoreductase K00175 - 1.2.7.11,1.2.7.3 0.0000000000000000000000000000000000000000000000000000000000000000000000133 262.0
DYD2_k127_451597_8 Bifunctional enzyme that catalyzes the formation of 4- diphosphocytidyl-2-C-methyl-D-erythritol from CTP and 2-C-methyl- D-erythritol 4-phosphate (MEP) (IspD), and catalyzes the conversion of 4-diphosphocytidyl-2-C-methyl-D-erythritol 2- phosphate (CDP-ME2P) to 2-C-methyl-D-erythritol 2,4- cyclodiphosphate (ME-CPP) with a corresponding release of cytidine 5-monophosphate (CMP) (IspF) K01770,K12506 - 2.7.7.60,4.6.1.12 0.00000000000000000000000000000000000000000000000000000000000000002131 242.0
DYD2_k127_451597_9 Forms part of the ribosomal stalk which helps the ribosome interact with GTP-bound translation factors K02867 - - 0.000000000000000000000000000000000000000000000000000001003 195.0
DYD2_k127_451972_0 Coenzyme A transferase K01039 - 2.8.3.12 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006051 382.0
DYD2_k127_451972_1 ABC transporter - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000517 365.0
DYD2_k127_451972_2 Methyltransferase type 11 K07755 - 2.1.1.137 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006802 314.0
DYD2_k127_451972_3 ABC transporter K02003 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000005841 287.0
DYD2_k127_451972_4 Coenzyme A transferase K01040 - 2.8.3.12 0.0000000000000000000000000000000000000000000000000000000000000000000000000000004084 278.0
DYD2_k127_451972_5 transcriptional regulator K03892 - - 0.000000000000000001521 89.0
DYD2_k127_4525655_0 DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates K03046 GO:0000428,GO:0005575,GO:0005618,GO:0005622,GO:0005623,GO:0005886,GO:0008150,GO:0016020,GO:0030312,GO:0030880,GO:0032991,GO:0040007,GO:0044424,GO:0044464,GO:0061695,GO:0071944,GO:1902494,GO:1990234 2.7.7.6 2.563e-250 798.0
DYD2_k127_4525655_1 Binding-protein-dependent transport systems inner membrane component K02011 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001324 359.0
DYD2_k127_4525655_2 iron ion homeostasis K02012 - - 0.000000000000000000000000000000000000000000000000000000000000002675 231.0
DYD2_k127_4525655_3 Part of the ABC transporter complex PotABCD involved in spermidine putrescine import. Responsible for energy coupling to the transport system K02010 - 3.6.3.30 0.0000000000000000000000000000000000000000002385 166.0
DYD2_k127_4527389_0 aconitate hydratase activity K01681 GO:0003674,GO:0003676,GO:0003723,GO:0003729,GO:0003730,GO:0003824,GO:0003994,GO:0005488,GO:0005506,GO:0005575,GO:0005576,GO:0005618,GO:0005622,GO:0005623,GO:0005737,GO:0005739,GO:0005829,GO:0005886,GO:0006082,GO:0006091,GO:0006099,GO:0006101,GO:0006629,GO:0006631,GO:0008150,GO:0008152,GO:0008198,GO:0009060,GO:0009987,GO:0010035,GO:0010038,GO:0010039,GO:0015980,GO:0016020,GO:0016829,GO:0016835,GO:0016836,GO:0016999,GO:0017144,GO:0019541,GO:0019679,GO:0019752,GO:0030312,GO:0030350,GO:0032787,GO:0040007,GO:0042221,GO:0043167,GO:0043169,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0043436,GO:0044237,GO:0044238,GO:0044255,GO:0044281,GO:0044424,GO:0044444,GO:0044464,GO:0045333,GO:0046459,GO:0046872,GO:0046914,GO:0047456,GO:0048037,GO:0050896,GO:0051536,GO:0051538,GO:0051539,GO:0051540,GO:0055114,GO:0071704,GO:0071944,GO:0072350,GO:0097159,GO:1901363 4.2.1.3 0.0 1075.0
DYD2_k127_4527389_1 May play a key role in the regulation of the intracellular concentration of adenosylhomocysteine K01251 - 3.3.1.1 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001955 566.0
DYD2_k127_4527389_10 Sugar isomerase (SIS) K15916 - 5.3.1.8,5.3.1.9 0.00000000000000000000000000000000000000000000000000000000000000008512 237.0
DYD2_k127_4527389_11 glyoxalase bleomycin resistance protein dioxygenase - - - 0.00000000000000000000000000000000000000000000000000000000002376 208.0
DYD2_k127_4527389_12 Transmembrane secretion effector - - - 0.00000000000000000000000000000000000000000000000000000000038 230.0
DYD2_k127_4527389_13 PFAM ABC transporter related K02013 - 3.6.3.34 0.000000000000000000000000000000000000000000000000000000002977 223.0
DYD2_k127_4527389_14 lactoylglutathione lyase activity - - - 0.0000000000000000000000000000000000000000000000000000002008 199.0
DYD2_k127_4527389_15 ABC-type Fe3 -hydroxamate transport system, periplasmic component K02016 - - 0.000000000000000000000000000000000000000000000000000304 197.0
DYD2_k127_4527389_16 COG1654 Biotin operon repressor K03524 - 6.3.4.15 0.0000000000000000000000000000003391 133.0
DYD2_k127_4527389_17 Sigma-70 region 2 K03088 - - 0.0000000000000000000000000000005398 131.0
DYD2_k127_4527389_18 permease - GO:0003674,GO:0005215,GO:0005575,GO:0005623,GO:0005886,GO:0005887,GO:0006810,GO:0008150,GO:0016020,GO:0016021,GO:0031224,GO:0031226,GO:0044425,GO:0044459,GO:0044464,GO:0051179,GO:0051234,GO:0055085,GO:0071944 - 0.0000000000000000000000000000007353 141.0
DYD2_k127_4527389_19 FR47-like protein - - - 0.0000000000000000000001551 108.0
DYD2_k127_4527389_2 Catalyzes the formation of S-adenosylmethionine (AdoMet) from methionine and ATP. The overall synthetic reaction is composed of two sequential steps, AdoMet formation and the subsequent tripolyphosphate hydrolysis which occurs prior to release of AdoMet from the enzyme K00789 - 2.5.1.6 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006951 525.0
DYD2_k127_4527389_20 PFAM zinc finger, SWIM domain protein - - - 0.00000000000000000001236 102.0
DYD2_k127_4527389_21 ABC-type multidrug transport system, ATPase component K01990 - - 0.00000000000000001369 85.0
DYD2_k127_4527389_22 protein conserved in bacteria K09778 - - 0.0000000000000001921 88.0
DYD2_k127_4527389_23 Phospholipase_D-nuclease N-terminal - - - 0.000000001277 61.0
DYD2_k127_4527389_3 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III K01835,K01840 - 5.4.2.2,5.4.2.8 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000287 437.0
DYD2_k127_4527389_4 Catalyzes the reduction of 1-pyrroline-5-carboxylate (PCA) to L-proline K00286 - 1.5.1.2 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000001072 287.0
DYD2_k127_4527389_5 tRNA synthetases class I (W and Y) K01867 - 6.1.1.2 0.000000000000000000000000000000000000000000000000000000000000000000000000000000003686 299.0
DYD2_k127_4527389_6 Mannose-1-phosphate guanylyltransferase K00971 - 2.7.7.13 0.00000000000000000000000000000000000000000000000000000000000000000000000000000001388 282.0
DYD2_k127_4527389_7 Carboxyl transferase domain K01963 - 2.1.3.15,6.4.1.2 0.000000000000000000000000000000000000000000000000000000000000000000000000000007951 270.0
DYD2_k127_4527389_8 Catalyzes a salvage reaction resulting in the formation of AMP, that is energically less costly than de novo synthesis K00759 - 2.4.2.7 0.000000000000000000000000000000000000000000000000000000000000000002073 231.0
DYD2_k127_4527389_9 Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily K02015 - - 0.00000000000000000000000000000000000000000000000000000000000000006835 245.0
DYD2_k127_4548659_0 Transketolase, pyrimidine binding domain K11381 - 1.2.4.4 1.197e-229 734.0
DYD2_k127_4548659_1 Part of the ABC transporter complex PotABCD involved in spermidine putrescine import. Responsible for energy coupling to the transport system K02052 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000487 467.0
DYD2_k127_4548659_2 Bacterial extracellular solute-binding protein - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002009 433.0
DYD2_k127_4548659_3 Binding-protein-dependent transport system inner membrane component - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007225 361.0
DYD2_k127_4548659_4 PFAM binding-protein-dependent transport systems inner membrane component K02053 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001399 306.0
DYD2_k127_4548659_5 3-methyladenine DNA glycosylase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000003565 273.0
DYD2_k127_4548659_6 Acyl-carrier-protein s-malonyltransferase K00645 - 2.3.1.39 0.000000000000000000000000000000000000000000000000000000000000000007262 249.0
DYD2_k127_4548659_7 EamA-like transporter family - - - 0.0000000000000000000000000003336 124.0
DYD2_k127_4548659_8 AraC-like ligand binding domain - - - 0.00000000000000000006549 102.0
DYD2_k127_4548659_9 Involved in the biosynthesis of sterol glucoside K05841 GO:0000003,GO:0003006,GO:0003674,GO:0003824,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006629,GO:0007049,GO:0008150,GO:0008152,GO:0008194,GO:0008202,GO:0009653,GO:0009987,GO:0010927,GO:0015020,GO:0016043,GO:0016125,GO:0016740,GO:0016757,GO:0016758,GO:0016906,GO:0019953,GO:0022402,GO:0022413,GO:0022414,GO:0022607,GO:0030154,GO:0030435,GO:0030437,GO:0031321,GO:0032120,GO:0032502,GO:0032505,GO:0032989,GO:0034293,GO:0035251,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0043934,GO:0043935,GO:0044085,GO:0044091,GO:0044238,GO:0044424,GO:0044464,GO:0044703,GO:0046527,GO:0048468,GO:0048646,GO:0048856,GO:0048869,GO:0051321,GO:0051704,GO:0061024,GO:0071704,GO:0071709,GO:0071840,GO:1901360,GO:1901615,GO:1903046 2.4.1.173 0.0001665 45.0
DYD2_k127_4551153_0 ABC transporter K06022,K06158,K10834 - 3.6.3.29,3.6.3.41 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002703 575.0
DYD2_k127_4551153_1 Methyladenine glycosylase K01246 - 3.2.2.20 0.000000000000000000000000000000000000000000000000000000000000005729 219.0
DYD2_k127_4551153_2 ACT domain K00928 - 2.7.2.4 0.000000000000000000000000000000000000000000000002271 186.0
DYD2_k127_4551153_3 Catalyzes the ATP-dependent phosphorylation of L- homoserine to L-homoserine phosphate K00872 - 2.7.1.39 0.00000000000000000000000000000000000000000000024 184.0
DYD2_k127_4551153_4 Lysyl oxidase - - - 0.000000000000000000000000000000000007461 156.0
DYD2_k127_4551153_5 EamA-like transporter family - - - 0.0000000009613 72.0
DYD2_k127_4583001_0 Belongs to the alpha-IPM synthase homocitrate synthase family K01649 - 2.3.3.13 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001851 594.0
DYD2_k127_4583001_1 Proline racemase K01777,K12658 - 5.1.1.4,5.1.1.8 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003513 472.0
DYD2_k127_4583001_10 Sulfite exporter TauE/SafE K07090 - - 0.000000000000000000000000000000000000000000000000000000000001607 217.0
DYD2_k127_4583001_11 Low temperature requirement A - - - 0.000000000000000000000000000000000000000000000000007683 196.0
DYD2_k127_4583001_12 Haloacid dehalogenase-like hydrolase K01560 - 3.8.1.2 0.00000000000000000000000000000000000000000352 164.0
DYD2_k127_4583001_13 Domain of unknown function (DUF4395) - - - 0.00000000000001588 81.0
DYD2_k127_4583001_14 LeuA allosteric (dimerisation) domain K01649 - 2.3.3.13 0.00000002563 63.0
DYD2_k127_4583001_2 FAD linked oxidase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003886 454.0
DYD2_k127_4583001_3 Catalyzes the cyclization of GTP to (8S)-3',8-cyclo-7,8- dihydroguanosine 5'-triphosphate K03639 - 4.1.99.22 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002635 441.0
DYD2_k127_4583001_4 COG0474 Cation transport ATPase K01537 - 3.6.3.8 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005353 425.0
DYD2_k127_4583001_5 Catalyzes the oxidation of 3-carboxy-2-hydroxy-4- methylpentanoate (3-isopropylmalate) to 3-carboxy-4-methyl-2- oxopentanoate. The product decarboxylates to 4-methyl-2 oxopentanoate K00052 GO:0003674,GO:0003824,GO:0003862,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006082,GO:0006520,GO:0006551,GO:0006807,GO:0008150,GO:0008152,GO:0008652,GO:0009058,GO:0009081,GO:0009082,GO:0009098,GO:0009987,GO:0016053,GO:0016491,GO:0016614,GO:0016616,GO:0019752,GO:0043436,GO:0044237,GO:0044238,GO:0044249,GO:0044281,GO:0044283,GO:0044424,GO:0044444,GO:0044464,GO:0046394,GO:0055114,GO:0071704,GO:1901564,GO:1901566,GO:1901576,GO:1901605,GO:1901607 1.1.1.85 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007922 392.0
DYD2_k127_4583001_6 Belongs to the class-IV pyridoxal-phosphate-dependent aminotransferase family K00826 - 2.6.1.42 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002085 336.0
DYD2_k127_4583001_7 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000001357 267.0
DYD2_k127_4583001_8 Imidazolone-5-propionate hydrolase K01468 - 3.5.2.7 0.00000000000000000000000000000000000000000000000000000000000000000000000005126 261.0
DYD2_k127_4583001_9 XdhC and CoxI family - - - 0.00000000000000000000000000000000000000000000000000000000000000000001325 246.0
DYD2_k127_4598949_0 TIGRFAM Arginyl-tRNA synthetase K01887 - 6.1.1.19 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004102 466.0
DYD2_k127_4598949_1 Zn peptidase - - - 0.00000000000000000000000000000000000000000001529 179.0
DYD2_k127_4607622_0 Phosphoenolpyruvate phosphomutase K01637 - 4.1.3.1 3.106e-316 983.0
DYD2_k127_4607622_1 Bacterial protein of unknown function (DUF885) - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002963 389.0
DYD2_k127_4607622_2 Major facilitator superfamily - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005472 312.0
DYD2_k127_4607622_3 Threonyl alanyl tRNA synthetase SAD K07050 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000002784 280.0
DYD2_k127_4607622_4 Major Facilitator Superfamily - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000002239 262.0
DYD2_k127_4607622_5 peptidase activity K01286 - 3.4.16.4 0.000000000000000000000000000000000001829 154.0
DYD2_k127_4607622_6 Aminoacyl-tRNA editing domain - - - 0.000000000000000000001285 99.0
DYD2_k127_4607622_7 Bacterial regulatory proteins, tetR family - - - 0.000000005524 70.0
DYD2_k127_4607622_8 Transcriptional regulator sugar kinase - - - 0.000004992 56.0
DYD2_k127_4622228_0 7TM receptor with intracellular HD hydrolase K07037 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000104 360.0
DYD2_k127_4622228_1 Ammonium Transporter Family K03320 - - 0.00000000000000000000000000158 114.0
DYD2_k127_4622228_2 Single strand-specific metallo-endoribonuclease involved in late-stage 70S ribosome quality control and in maturation of the 3' terminus of the 16S rRNA K07042 - - 0.00000000000000000003963 97.0
DYD2_k127_4622228_3 Aspartyl-tRNA amidotransferase K09117 - - 0.0000000000000003697 80.0
DYD2_k127_4682420_0 PFAM Acetyl-CoA hydrolase transferase K01067 - 3.1.2.1 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001496 501.0
DYD2_k127_4682420_1 - - - - 0.000000000000000000000000000528 122.0
DYD2_k127_4682420_2 - - - - 0.00000000000000000001426 98.0
DYD2_k127_4682420_3 Universal stress protein family - - - 0.0000000000000001412 93.0
DYD2_k127_4682420_4 Belongs to the class VI-like SAM-binding methyltransferase superfamily. Isoprenylcysteine carboxyl methyltransferase family - - - 0.0000000002478 72.0
DYD2_k127_4682420_5 3-methyladenine DNA glycosylase - - - 0.00000004314 55.0
DYD2_k127_4738692_0 Aldehyde dehydrogenase family - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000143 565.0
DYD2_k127_4738692_1 Catalyzes the condensation reaction of fatty acid synthesis by the addition to an acyl acceptor of two carbons from malonyl-ACP K09458 - 2.3.1.179 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002935 453.0
DYD2_k127_4738692_10 Lactonase, 7-bladed beta-propeller - - - 0.000000000518 68.0
DYD2_k127_4738692_2 PAP2 superfamily - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006748 417.0
DYD2_k127_4738692_3 Transcriptional regulator - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003037 417.0
DYD2_k127_4738692_4 Peptidase family M28 - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002958 328.0
DYD2_k127_4738692_5 malonyl CoA-acyl carrier protein transacylase K00645 - 2.3.1.39 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000001109 295.0
DYD2_k127_4738692_6 Catalyzes the condensation reaction of fatty acid synthesis by the addition to an acyl acceptor of two carbons from malonyl-ACP K09458 - 2.3.1.179 0.000000000000000000000000000000000000000000000000000000002337 205.0
DYD2_k127_4738692_7 Involved in sulfur transfer in the conversion of molybdopterin precursor Z to molybdopterin K21142 - 2.8.1.12 0.0000000000000000000000000000000000000000001367 177.0
DYD2_k127_4738692_8 Carotenoid biosynthesis protein K22502 - 5.5.1.19 0.00000000000000004658 96.0
DYD2_k127_4738692_9 Rieske-like [2Fe-2S] domain K05710 - - 0.0000000000000001485 86.0
DYD2_k127_4843053_0 A type II topoisomerase that negatively supercoils closed circular double-stranded (ds) DNA in an ATP-dependent manner to modulate DNA topology and maintain chromosomes in an underwound state. Negative supercoiling favors strand separation, and DNA replication, transcription, recombination and repair, all of which involve strand separation. Also able to catalyze the interconversion of other topological isomers of dsDNA rings, including catenanes and knotted rings. Type II topoisomerases break and join 2 DNA strands simultaneously in an ATP-dependent manner K02470 - 5.99.1.3 5.442e-243 767.0
DYD2_k127_4843053_1 A type II topoisomerase that negatively supercoils closed circular double-stranded (ds) DNA in an ATP-dependent manner to modulate DNA topology and maintain chromosomes in an underwound state. Negative supercoiling favors strand separation, and DNA replication, transcription, recombination and repair, all of which involve strand separation. Also able to catalyze the interconversion of other topological isomers of dsDNA rings, including catenanes and knotted rings. Type II topoisomerases break and join 2 DNA strands simultaneously in an ATP-dependent manner K02469 - 5.99.1.3 1.471e-231 732.0
DYD2_k127_4843053_2 PFAM penicillin-binding protein transpeptidase K05515 - 3.4.16.4 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001098 334.0
DYD2_k127_4843053_3 CobQ CobB MinD ParA nucleotide binding domain K03496 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002982 312.0
DYD2_k127_4843053_4 Peptidoglycan polymerase that is essential for cell wall elongation K05837 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000005934 271.0
DYD2_k127_4843053_5 ParB-like nuclease domain K03497 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000008383 256.0
DYD2_k127_4843053_6 - - - - 0.0000000000000000000000000000000000000131 147.0
DYD2_k127_4843053_7 Thioesterase superfamily - - - 0.0000000000000000000002056 104.0
DYD2_k127_4843053_8 Involved in formation of the rod shape of the cell. May also contribute to regulation of formation of penicillin-binding proteins K03571 GO:0005575,GO:0005623,GO:0005886,GO:0005887,GO:0008150,GO:0008360,GO:0016020,GO:0016021,GO:0022603,GO:0022604,GO:0031224,GO:0031226,GO:0044425,GO:0044459,GO:0044464,GO:0050789,GO:0050793,GO:0050794,GO:0051128,GO:0065007,GO:0065008,GO:0071944 - 0.00004021 52.0
DYD2_k127_4843053_9 - - - - 0.0003415 46.0
DYD2_k127_4846428_0 Part of the ABC transporter complex PstSACB involved in phosphate import. Responsible for energy coupling to the transport system K02036 - 3.6.3.27 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001322 379.0
DYD2_k127_4846428_1 PBP superfamily domain K02040 GO:0003674,GO:0005488,GO:0005575,GO:0005576,GO:0005618,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005886,GO:0006810,GO:0006811,GO:0006817,GO:0006820,GO:0006950,GO:0007154,GO:0008150,GO:0009267,GO:0009605,GO:0009987,GO:0009991,GO:0015698,GO:0016020,GO:0016036,GO:0030312,GO:0031667,GO:0031668,GO:0031669,GO:0033554,GO:0042301,GO:0042594,GO:0043167,GO:0043168,GO:0044424,GO:0044444,GO:0044464,GO:0050896,GO:0051179,GO:0051234,GO:0051716,GO:0071496,GO:0071944 - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003183 332.0
DYD2_k127_4846428_10 subunit of a heme lyase K02200 - - 0.00000000000000003975 89.0
DYD2_k127_4846428_11 Ketosteroid isomerase-related protein - - - 0.00000000000002718 83.0
DYD2_k127_4846428_12 SnoaL-like domain - - - 0.0000000006228 70.0
DYD2_k127_4846428_13 PFAM Cytochrome C assembly protein K02198 - - 0.000004617 50.0
DYD2_k127_4846428_2 Binding-protein-dependent transport system inner membrane component K02037 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002822 328.0
DYD2_k127_4846428_3 Binding-protein-dependent transport system inner membrane component K02038 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000002799 273.0
DYD2_k127_4846428_4 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain K07636 - 2.7.13.3 0.00000000000000000000000000000000000000000000000000000000001076 223.0
DYD2_k127_4846428_5 Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain K07658 - - 0.0000000000000000000000000000000000000000000000000000000005969 209.0
DYD2_k127_4846428_6 YceI-like domain - - - 0.00000000000000000000000000000000000000000000000005625 186.0
DYD2_k127_4846428_7 Plays a role in the regulation of phosphate uptake K02039 - - 0.00000000000000000000000000000000000000008088 166.0
DYD2_k127_4846428_8 helix_turn_helix multiple antibiotic resistance protein - - - 0.000000000000000000000000000000000565 137.0
DYD2_k127_4846428_9 Thiol disulfide interchange protein K02199 - - 0.00000000000000000000000002547 117.0
DYD2_k127_4963982_0 PFAM Phenylalanine and histidine ammonia-lyase K01745 - 4.3.1.3 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005406 466.0
DYD2_k127_4963982_1 SNARE associated Golgi protein K01077 - 3.1.3.1 0.00000000000000000000000000000000000000293 153.0
DYD2_k127_4963982_2 Phosphoesterase, PA-phosphatase related K19302 - 3.6.1.27 0.00000000006553 72.0
DYD2_k127_4967954_0 helicase superfamily c-terminal domain K06877 - - 1.079e-272 862.0
DYD2_k127_4967954_1 Sodium Bile acid symporter family K03325,K03741 GO:0003674,GO:0005215,GO:0005575,GO:0005623,GO:0005886,GO:0006810,GO:0006811,GO:0006820,GO:0008150,GO:0008509,GO:0015075,GO:0015103,GO:0015104,GO:0015105,GO:0015291,GO:0015297,GO:0015318,GO:0015698,GO:0015699,GO:0015700,GO:0016020,GO:0022804,GO:0022857,GO:0034220,GO:0044464,GO:0051179,GO:0051234,GO:0055085,GO:0071944,GO:0098656 1.20.4.1 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004815 418.0
DYD2_k127_4967954_2 Transmembrane secretion effector - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000001976 300.0
DYD2_k127_4967954_3 Ligates lysine onto the cytidine present at position 34 of the AUA codon-specific tRNA(Ile) that contains the anticodon CAU, in an ATP-dependent manner. Cytidine is converted to lysidine, thus changing the amino acid specificity of the tRNA from methionine to isoleucine K04075 - 6.3.4.19 0.00000000000000000000000000000000000006111 155.0
DYD2_k127_4967954_4 RNase_H superfamily K07502 - - 0.00000004741 59.0
DYD2_k127_4967954_5 helix_turn_helix, Arsenical Resistance Operon Repressor - - - 0.00000009906 58.0
DYD2_k127_4967954_7 cell cycle K05589,K13052 - - 0.0002521 51.0
DYD2_k127_4967954_8 OsmC-like protein - - - 0.0006739 50.0
DYD2_k127_4978104_0 Catalyzes the reversible interconversion of serine and glycine with tetrahydrofolate (THF) serving as the one-carbon carrier. This reaction serves as the major source of one-carbon groups required for the biosynthesis of purines, thymidylate, methionine, and other important biomolecules. Also exhibits THF- independent aldolase activity toward beta-hydroxyamino acids, producing glycine and aldehydes, via a retro-aldol mechanism K00600 - 2.1.2.1 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001985 526.0
DYD2_k127_4978104_1 Peptide chain release factor 1 directs the termination of translation in response to the peptide chain termination codons UAG and UAA K02835,K15034 GO:0003674,GO:0003676,GO:0003723,GO:0003747,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006412,GO:0006415,GO:0006518,GO:0006807,GO:0008079,GO:0008135,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0016043,GO:0016149,GO:0019538,GO:0022411,GO:0032984,GO:0034641,GO:0034645,GO:0043021,GO:0043022,GO:0043043,GO:0043170,GO:0043603,GO:0043604,GO:0043624,GO:0043933,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044424,GO:0044444,GO:0044464,GO:0044877,GO:0071704,GO:0071840,GO:0097159,GO:1901363,GO:1901564,GO:1901566,GO:1901576 - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001044 448.0
DYD2_k127_4978104_10 Belongs to the bacterial ribosomal protein bL27 family K02899 GO:0003674,GO:0003735,GO:0005198,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0015934,GO:0022625,GO:0022626,GO:0032991,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:1990904 - 0.00000000000000000000000002258 110.0
DYD2_k127_4978104_11 This protein binds to 23S rRNA in the presence of protein L20 K02888 GO:0003674,GO:0003735,GO:0005198,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0005886,GO:0006412,GO:0006518,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0015934,GO:0016020,GO:0019538,GO:0022625,GO:0022626,GO:0032991,GO:0034641,GO:0034645,GO:0040007,GO:0043043,GO:0043170,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:0071704,GO:0071944,GO:1901564,GO:1901566,GO:1901576,GO:1990904 - 0.0000000000000000000000001127 115.0
DYD2_k127_4978104_12 Binds the 23S rRNA K02909 - - 0.000000000000000000001563 99.0
DYD2_k127_4978104_13 Uncharacterized protein conserved in bacteria (DUF2344) - - - 0.0000000000003145 83.0
DYD2_k127_4978104_2 Protein of unknown function (DUF521) K09123 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008097 427.0
DYD2_k127_4978104_3 Protein of unknown function (DUF1385) K09153 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000004277 262.0
DYD2_k127_4978104_4 AI-2E family transporter - - - 0.000000000000000000000000000000000000000000000000000000001914 223.0
DYD2_k127_4978104_5 Methylates the class 1 translation termination release factors RF1 PrfA and RF2 PrfB on the glutamine residue of the universally conserved GGQ motif K02493 GO:0003674,GO:0003824,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0008150,GO:0008152,GO:0008168,GO:0008757,GO:0016740,GO:0016741,GO:0032259,GO:0044424,GO:0044444,GO:0044464 2.1.1.297 0.000000000000000000000000000000000000000000000003595 190.0
DYD2_k127_4978104_6 phosphinothricin N-acetyltransferase activity K03830 - - 0.000000000000000000000000000000000000000000000005744 185.0
DYD2_k127_4978104_7 galactose-6-phosphate isomerase activity K00761,K01808 - 2.4.2.9,5.3.1.6 0.0000000000000000000000000000000000000000000004661 174.0
DYD2_k127_4978104_8 Required for the formation of a threonylcarbamoyl group on adenosine at position 37 (t(6)A37) in tRNAs that read codons beginning with adenine K07566 - 2.7.7.87 0.0000000000000000000000000000008822 130.0
DYD2_k127_4978104_9 Protein of unknown function DUF126 K09128 - - 0.0000000000000000000000000001904 124.0
DYD2_k127_4991661_0 Adenylyl- / guanylyl cyclase, catalytic domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002257 502.0
DYD2_k127_4991661_1 NAD NADP transhydrogenase alpha subunit K00324 - 1.6.1.2 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009578 399.0
DYD2_k127_4991661_2 EamA-like transporter family - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000447 325.0
DYD2_k127_4991661_3 ABC transporter, ATP-binding protein K01990 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000111 291.0
DYD2_k127_4991661_4 ABC-type Na efflux pump, permease component K01992 - - 0.000000000000000000000000000000000000000000002591 181.0
DYD2_k127_4991661_5 phosphatase homologous to the C-terminal domain of histone macroH2A1 - - - 0.0000000000000000000000000000000000000000000267 173.0
DYD2_k127_4991661_6 NAD(P) transhydrogenase, alpha subunit K00324 - 1.6.1.2 0.0000000000000000000000000354 117.0
DYD2_k127_4991661_7 The transhydrogenation between NADH and NADP is coupled to respiration and ATP hydrolysis and functions as a proton pump across the membrane K00325 - 1.6.1.2 0.0000000000000000000009303 98.0
DYD2_k127_5080396_0 - - - - 0.0 1160.0
DYD2_k127_5080396_1 Catalyzes the transfer of a two-carbon ketol group from a ketose donor to an aldose acceptor, via a covalent intermediate with the cofactor thiamine pyrophosphate K00615 - 2.2.1.1 3.554e-295 930.0
DYD2_k127_5080396_10 Component of the ubiquinol-cytochrome c reductase complex (complex III or cytochrome b-c1 complex), which is a respiratory chain that generates an electrochemical potential coupled to ATP synthesis - - - 0.0000000000000000000000000000000000000000000001075 180.0
DYD2_k127_5080396_11 Belongs to the HesB IscA family K13628,K15724 GO:0003674,GO:0005488,GO:0005506,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005886,GO:0006091,GO:0006790,GO:0006807,GO:0008150,GO:0008152,GO:0009060,GO:0009061,GO:0009987,GO:0010467,GO:0015980,GO:0016020,GO:0016043,GO:0016226,GO:0019538,GO:0022607,GO:0031163,GO:0043167,GO:0043169,GO:0043170,GO:0044085,GO:0044237,GO:0044238,GO:0044424,GO:0044444,GO:0044464,GO:0045333,GO:0046872,GO:0046914,GO:0048037,GO:0051186,GO:0051536,GO:0051537,GO:0051539,GO:0051540,GO:0051604,GO:0055114,GO:0071704,GO:0071840,GO:0071944,GO:1901564 - 0.0000000000000000000000000000000002676 138.0
DYD2_k127_5080396_12 TM2 domain protein - - - 0.0000000000000000000000000000000002889 140.0
DYD2_k127_5080396_13 Rieske 2Fe-2S - - - 0.0000000000000000000000002088 120.0
DYD2_k127_5080396_14 Belongs to the GbsR family - - - 0.0000000000000006009 87.0
DYD2_k127_5080396_15 Rieske [2Fe-2S] domain - - - 0.000000000000007316 82.0
DYD2_k127_5080396_16 Cytochrome c K17222 - - 0.00000000000004335 82.0
DYD2_k127_5080396_2 Fructose-bisphosphate aldolase class-II - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002105 486.0
DYD2_k127_5080396_3 PFAM Aminotransferase class I and II - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004111 454.0
DYD2_k127_5080396_4 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001242 379.0
DYD2_k127_5080396_5 Cytochrome b(N-terminal)/b6/petB - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001806 327.0
DYD2_k127_5080396_6 Hexapeptide repeat of succinyl-transferase K00661 - 2.3.1.79 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000001678 286.0
DYD2_k127_5080396_7 NTF2-like N-terminal transpeptidase domain K05515 - 3.4.16.4 0.0000000000000000000000000000000000000000000000000000000000000000000126 258.0
DYD2_k127_5080396_8 GlcNAc-PI de-N-acetylase - - - 0.0000000000000000000000000000000000000000000000000000000000001107 220.0
DYD2_k127_5080396_9 serine-type aminopeptidase activity - - - 0.0000000000000000000000000000000000000000000000000001543 206.0
DYD2_k127_5088783_0 PFAM Adenylyl cyclase class-3 4 guanylyl cyclase - - - 2.983e-203 679.0
DYD2_k127_5088783_1 Catalyzes the attachment of threonine to tRNA(Thr) in a two-step reaction L-threonine is first activated by ATP to form Thr-AMP and then transferred to the acceptor end of tRNA(Thr) K01868 - 6.1.1.3 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002258 592.0
DYD2_k127_5088783_10 Sugar-specific transcriptional regulator TrmB - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000003039 270.0
DYD2_k127_5088783_11 COGs COG5001 signal transduction protein containing a membrane domain an EAL and a GGDEF domain - - - 0.000000000000000000000000000000000000000000000000000000000000000005538 251.0
DYD2_k127_5088783_12 helix_turn_helix, mercury resistance - - - 0.000000000000000000000000000000000000000000000000000000000000000356 229.0
DYD2_k127_5088783_13 PFAM phenylacetic acid catabolic family protein K02611 - 1.14.13.149 0.0000000000000000000000000000000000000000000000000000000000007423 219.0
DYD2_k127_5088783_14 PFAM SMP-30 Gluconolaconase - - - 0.0000000000000000000000000000000000000000000000000000000007588 225.0
DYD2_k127_5088783_15 PFAM diacylglycerol kinase catalytic region - - - 0.0000000000000000000000000000000000000000000001278 184.0
DYD2_k127_5088783_16 Belongs to the peptidase S8 family - - - 0.0000000000000000000000000000000000000000000007397 189.0
DYD2_k127_5088783_17 Pfam:DUF59 K02612 - - 0.00000000000000000000000000000000000000000002648 172.0
DYD2_k127_5088783_18 Binding-protein-dependent transport system inner membrane component K02033 - - 0.000000000000000000000000000000000000000002244 160.0
DYD2_k127_5088783_19 von Willebrand factor (vWF) type A domain - - - 0.00000000000000000000000000000000000000001104 175.0
DYD2_k127_5088783_2 PFAM oxidoreductase molybdopterin binding - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001752 466.0
DYD2_k127_5088783_20 Hydrolase of the alpha beta-hydrolase K07020 - - 0.000000000000000000001441 101.0
DYD2_k127_5088783_21 phenylacetate catabolic process K02610 - - 0.00000000000000000000147 98.0
DYD2_k127_5088783_22 PFAM Adenylate and Guanylate cyclase catalytic domain K01768 - 4.6.1.1 0.0000000000000000000029 111.0
DYD2_k127_5088783_23 Domain of unknown function DUF11 - - - 0.000000000000000000142 104.0
DYD2_k127_5088783_24 Uncharacterized protein conserved in bacteria (DUF2255) - - - 0.0000000002941 66.0
DYD2_k127_5088783_25 TIGRFAM phenylacetate-CoA oxygenase, PaaJ subunit K02612 - - 0.00000002971 55.0
DYD2_k127_5088783_26 heme binding - - - 0.0000826 54.0
DYD2_k127_5088783_27 glyoxalase bleomycin resistance protein dioxygenase - - - 0.00008383 51.0
DYD2_k127_5088783_3 TIGRFAM phenylacetate-CoA oxygenase, PaaG subunit K02609 - 1.14.13.149 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006639 445.0
DYD2_k127_5088783_4 Cyclic nucleotide-monophosphate binding domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000004474 314.0
DYD2_k127_5088783_5 PFAM Pyridine nucleotide-disulphide oxidoreductase K17218 - 1.8.5.4 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000006968 306.0
DYD2_k127_5088783_6 Putative neutral zinc metallopeptidase K07054 GO:0005575,GO:0005576 - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000001276 301.0
DYD2_k127_5088783_7 Transcriptional regulator - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000001947 325.0
DYD2_k127_5088783_8 - - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000962 279.0
DYD2_k127_5088783_9 Protein of unknown function DUF72 - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000003831 285.0
DYD2_k127_5130161_1 Pyridoxamine 5'-phosphate oxidase - - - 0.000000000000000000000000000000001181 135.0
DYD2_k127_5130161_2 TfoX N-terminal domain - - - 0.0000000000000000000000000000002301 129.0
DYD2_k127_5130161_3 cell redox homeostasis K02199 - - 0.0000000000000000000000006588 116.0
DYD2_k127_5130161_4 Predicted integral membrane protein (DUF2269) - - - 0.000000000008361 75.0
DYD2_k127_5133211_0 Carbamoyl-phosphate synthetase large chain, oligomerisation domain K01955 - 6.3.5.5 9.741e-299 943.0
DYD2_k127_5133211_1 Belongs to the CarA family K01956 - 6.3.5.5 0.000000000000000000000000000000000000000000000000000000000000000000001797 250.0
DYD2_k127_5133211_10 Domain of unknown function (DUF4349) - - - 0.0000000000000000005748 101.0
DYD2_k127_5133211_11 Lamin Tail Domain - - - 0.000006082 55.0
DYD2_k127_5133211_12 Copper binding proteins, plastocyanin/azurin family - - - 0.0002481 49.0
DYD2_k127_5133211_2 phosphatidate phosphatase activity - - - 0.00000000000000000000000000000000000000000000000000007731 198.0
DYD2_k127_5133211_4 BioY family K03523 - - 0.0000000000000000000000000000000000000002109 161.0
DYD2_k127_5133211_5 phosphatidate phosphatase activity - - - 0.00000000000000000000000000000000003417 154.0
DYD2_k127_5133211_6 VIT family - - - 0.00000000000000000000000000000005586 141.0
DYD2_k127_5133211_7 YjbR - - - 0.00000000000000000000000000199 116.0
DYD2_k127_5133211_8 - - - - 0.0000000000000000000000001153 124.0
DYD2_k127_5133211_9 Helix-hairpin-helix motif K14162 - 2.7.7.7 0.00000000000000000000001005 107.0
DYD2_k127_5142253_0 PFAM carboxyl transferase K01966 - 2.1.3.15,6.4.1.3 6.907e-231 729.0
DYD2_k127_5142253_1 PFAM carbohydrate kinase K00854 - 2.7.1.17 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002098 612.0
DYD2_k127_5142253_2 Belongs to the xylose isomerase family K01805 GO:0003674,GO:0003824,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005975,GO:0005996,GO:0008150,GO:0008152,GO:0009045,GO:0009056,GO:0016052,GO:0016853,GO:0016860,GO:0016861,GO:0019321,GO:0019323,GO:0042732,GO:0042843,GO:0044238,GO:0044281,GO:0044282,GO:0044424,GO:0044464,GO:0046365,GO:0071704,GO:1901575 5.3.1.5 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003402 588.0
DYD2_k127_5142253_3 Belongs to the binding-protein-dependent transport system permease family K10544 GO:0003674,GO:0005215,GO:0005575,GO:0005623,GO:0005886,GO:0006810,GO:0008150,GO:0008643,GO:0015144,GO:0015145,GO:0015749,GO:0016020,GO:0016021,GO:0022857,GO:0031224,GO:0034219,GO:0044425,GO:0044464,GO:0051119,GO:0051179,GO:0051234,GO:0055085,GO:0071702,GO:0071944 - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003718 435.0
DYD2_k127_5142253_4 ATPases associated with a variety of cellular activities K10545 - 3.6.3.17 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002247 358.0
DYD2_k127_5142253_5 PFAM Cobyrinic acid a,c-diamide synthase K03496 - - 0.000000000000000000000000000000000000000000000000000000000000000000005661 242.0
DYD2_k127_5142253_6 Belongs to the ParB family K03497 - - 0.000000000000000000000000000000000000000006295 167.0
DYD2_k127_5142253_7 - - - - 0.000007569 58.0
DYD2_k127_5186256_0 Amidohydrolase family K01464 - 3.5.2.2 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002567 599.0
DYD2_k127_5186256_1 decarboxylase K01593 - 4.1.1.105,4.1.1.28 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002385 493.0
DYD2_k127_5186256_2 TrkA-N domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001831 455.0
DYD2_k127_5186256_3 Carbon-nitrogen hydrolase K01431 - 3.5.1.6 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001737 445.0
DYD2_k127_5186256_4 Luciferase-like monooxygenase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001329 351.0
DYD2_k127_5186256_5 Beta-lactamase superfamily domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000002202 290.0
DYD2_k127_5186256_6 Trypsin-like serine proteases, typically periplasmic, contain C-terminal PDZ domain - GO:0005575,GO:0005576,GO:0005618,GO:0005623,GO:0005886,GO:0005887,GO:0008150,GO:0009268,GO:0009405,GO:0009628,GO:0010447,GO:0016020,GO:0016021,GO:0030312,GO:0031224,GO:0031226,GO:0044419,GO:0044425,GO:0044459,GO:0044464,GO:0050896,GO:0051704,GO:0071944 - 0.0000000000000000000000000000000000000000000000000002293 201.0
DYD2_k127_5186256_7 serine-type endopeptidase activity - - - 0.0000000000000000000000000000000000000000000002223 177.0
DYD2_k127_5186256_8 PAS domain - - - 0.000000000000000000000004284 115.0
DYD2_k127_5186256_9 AAA domain - - - 0.0000000000000000000005874 104.0
DYD2_k127_5197365_0 Catalyzes the conversion of acetate into acetyl-CoA (AcCoA), an essential intermediate at the junction of anabolic and catabolic pathways. AcsA undergoes a two-step reaction. In the first half reaction, AcsA combines acetate with ATP to form acetyl-adenylate (AcAMP) intermediate. In the second half reaction, it can then transfer the acetyl group from AcAMP to the sulfhydryl group of CoA, forming the product AcCoA K01895 - 6.2.1.1 1.922e-215 678.0
DYD2_k127_5197365_1 GDSL-like Lipase/Acylhydrolase - - - 0.000000000000000000000000000000000000000000000000000000000000166 230.0
DYD2_k127_5197365_2 META domain - - - 0.0000000000000000000000000000000000000000000000004455 185.0
DYD2_k127_5197365_3 PFAM Nitrilase cyanide hydratase and apolipoprotein N-acyltransferase - - - 0.00000000000000000000000000000001026 132.0
DYD2_k127_5197365_4 Peptidase inhibitor I9 - - - 0.000000000000000000008561 106.0
DYD2_k127_5240867_0 Essential cell division protein that forms a contractile ring structure (Z ring) at the future cell division site. The regulation of the ring assembly controls the timing and the location of cell division. One of the functions of the FtsZ ring is to recruit other cell division proteins to the septum to produce a new cell wall between the dividing cells. Binds GTP and shows GTPase activity K03531 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001944 452.0
DYD2_k127_5240867_1 Cell division protein that is involved in the assembly of the Z ring. May serve as a membrane anchor for the Z ring K03590 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004508 413.0
DYD2_k127_5240867_10 YGGT family K02221 - - 0.0000000000000005805 81.0
DYD2_k127_5240867_11 Belongs to the UPF0235 family K09131 - - 0.000004138 55.0
DYD2_k127_5240867_12 cell division protein FtsQ K03589 GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005886,GO:0005887,GO:0008150,GO:0016020,GO:0016021,GO:0031224,GO:0031226,GO:0040007,GO:0044424,GO:0044425,GO:0044444,GO:0044459,GO:0044464,GO:0071944 - 0.0002248 53.0
DYD2_k127_5240867_2 The glycine cleavage system catalyzes the degradation of glycine K00605 - 2.1.2.10 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007402 370.0
DYD2_k127_5240867_3 Transmembrane secretion effector - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001116 348.0
DYD2_k127_5240867_4 Belongs to the D-alanine--D-alanine ligase family K01921 - 6.3.2.4 0.000000000000000000000000000000000000000000000000000000000000000000000000002007 263.0
DYD2_k127_5240867_5 Pyridoxal 5'-phosphate (PLP)-binding protein, which is involved in PLP homeostasis K06997 - - 0.00000000000000000000000000000000000000000000000008171 186.0
DYD2_k127_5240867_6 Methyltransferase required for the conversion of demethylmenaquinol (DMKH2) to menaquinol (MKH2) K03183 - 2.1.1.163,2.1.1.201 0.0000000000000000000000000000000000000000000000003418 195.0
DYD2_k127_5240867_7 glycosyl transferase group 1 - - - 0.00000000000000000000000000000000000000000001536 184.0
DYD2_k127_5240867_8 Protein of unknown function (DUF1290) - - - 0.00000000000000000000000000000009554 127.0
DYD2_k127_5240867_9 NUDIX domain - - - 0.0000000000000000000000000002894 123.0
DYD2_k127_5305385_0 Malate synthase K01638 - 2.3.3.9 1.045e-216 688.0
DYD2_k127_5305385_1 Aldehyde oxidase and xanthine dehydrogenase, molybdopterin binding K03520 - 1.2.5.3 8.808e-205 661.0
DYD2_k127_5305385_10 Peptidase family M1 domain - - - 0.0000000000000000000000000002023 132.0
DYD2_k127_5305385_11 Acetyltransferase (GNAT) domain - - - 0.0000000000000000000000000004161 127.0
DYD2_k127_5305385_12 Belongs to the transthyretin family. 5-hydroxyisourate hydrolase subfamily K07127 - 3.5.2.17 0.0000000000000000000000198 108.0
DYD2_k127_5305385_13 Acetyltransferase (GNAT) family - - - 0.00000000000000000000003161 114.0
DYD2_k127_5305385_14 The RuvA-RuvB complex in the presence of ATP renatures cruciform structure in supercoiled DNA with palindromic sequence, indicating that it may promote strand exchange reactions in homologous recombination. RuvAB is a helicase that mediates the Holliday junction migration by localized denaturation and reannealing. RuvA stimulates, in the presence of DNA, the weak ATPase activity of RuvB K03550 - 3.6.4.12 0.00000000000000000009346 93.0
DYD2_k127_5305385_15 OHCU decarboxylase - - - 0.0000000000000000001814 102.0
DYD2_k127_5305385_16 ATP binding to DnaK triggers the release of the substrate protein, thus completing the reaction cycle. Several rounds of ATP-dependent interactions between DnaJ, DnaK and GrpE are required for fully efficient folding. Also involved, together with DnaK and GrpE, in the DNA replication of plasmids through activation of initiation proteins K03686,K05516 - - 0.000000000004788 72.0
DYD2_k127_5305385_2 Catalyzes the oxidation of uric acid to 5- hydroxyisourate, which is further processed to form (S)-allantoin K00365 - 1.7.3.3 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008813 331.0
DYD2_k127_5305385_3 Amidohydrolase family K01464,K01466 - 3.5.2.2,3.5.2.5 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005222 321.0
DYD2_k127_5305385_4 Luciferase-like monooxygenase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000001113 252.0
DYD2_k127_5305385_5 xanthine dehydrogenase activity K13479 - 1.17.1.4 0.000000000000000000000000000000000000000000000000000000001408 210.0
DYD2_k127_5305385_6 [2Fe-2S] binding domain K03518,K13483 - 1.2.5.3 0.000000000000000000000000000000000000000000000000002772 187.0
DYD2_k127_5305385_7 protein conserved in bacteria - - - 0.0000000000000000000000000000000000000000000000008505 181.0
DYD2_k127_5305385_8 Protein of unknown function (DUF3830) - - - 0.0000000000000000000000000000000000003002 153.0
DYD2_k127_5305385_9 CoA binding domain K06929 - - 0.000000000000000000000000000000000004629 145.0
DYD2_k127_5334398_0 Belongs to the arginase family K01480 - 3.5.3.11 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007836 379.0
DYD2_k127_5334398_1 Catalyzes the ATP-dependent amination of UTP to CTP with either L-glutamine or ammonia as the source of nitrogen. Regulates intracellular CTP levels through interactions with the four ribonucleotide triphosphates K01937 - 6.3.4.2 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003329 349.0
DYD2_k127_5334398_2 Catalyzes the reversible cleavage of pseudouridine 5'- phosphate (PsiMP) to ribose 5-phosphate and uracil. Functions biologically in the cleavage direction, as part of a pseudouridine degradation pathway K16329 - 4.2.1.70 0.0000000000000000000000000000000000000000000000000000000000000000000000000000002755 279.0
DYD2_k127_5334398_3 Sodium/hydrogen exchanger family K03316 - - 0.000000000000000000000000000000000000000000000000000000000000000000000002793 264.0
DYD2_k127_5334398_4 UbiA prenyltransferase family - - - 0.0000000000000000000000009645 114.0
DYD2_k127_5334398_5 PFAM pfkB family carbohydrate kinase - - - 0.000000000000000000001377 106.0
DYD2_k127_5334398_6 Uncharacterized conserved protein (DUF2203) - - - 0.00000000000000000001366 98.0
DYD2_k127_5376572_0 galactose-1-phosphate uridylyltransferase K00965 - 2.7.7.12 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001432 316.0
DYD2_k127_5376572_1 Transposase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000008779 291.0
DYD2_k127_5376572_2 serine-type peptidase activity - - - 0.000000000000000000000000000000000000006035 155.0
DYD2_k127_5376572_3 OsmC-like protein K04063 - - 0.0000000000000000000000000000000006658 139.0
DYD2_k127_5376572_4 Acetyltransferase (GNAT) domain - - - 0.000000000000000000000000000000001162 137.0
DYD2_k127_5376572_5 binds with the catalytic core of RNA polymerase to produce the holoenzyme and directs bacterial core RNA polymerase to specific promoter elements to initiate transcription this protein is involved in detoxification and protection against antimicrobial K03088 - - 0.000000000000000000000000001003 119.0
DYD2_k127_5427222_0 peptidase activity, acting on L-amino acid peptides K13735,K20276,K21449 - - 0.0 1133.0
DYD2_k127_5427222_1 Zinc carboxypeptidase - - - 0.000000000000002046 91.0
DYD2_k127_567043_0 domain protein - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008776 409.0
DYD2_k127_567043_1 DNA polymerase III is a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria. This DNA polymerase also exhibits 3' to 5' exonuclease activity K02343 GO:0006139,GO:0006259,GO:0006260,GO:0006261,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0034641,GO:0034645,GO:0043170,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0046483,GO:0071704,GO:0090304,GO:1901360,GO:1901576 2.7.7.7 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000238 289.0
DYD2_k127_567043_10 - - - - 0.00000000004904 66.0
DYD2_k127_567043_11 - - - - 0.0000000002084 61.0
DYD2_k127_567043_12 Hemolysin-type calcium-binding repeat (2 copies) - - - 0.00006063 57.0
DYD2_k127_567043_14 - - - - 0.0003798 44.0
DYD2_k127_567043_2 GGDEF domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000003505 281.0
DYD2_k127_567043_3 May play a role in DNA repair. It seems to be involved in an RecBC-independent recombinational process of DNA repair. It may act with RecF and RecO K06187 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000002002 257.0
DYD2_k127_567043_4 PFAM glycosyl transferase family 39 K00728 - 2.4.1.109 0.00000000000000000000000000000000000000000000000000000000000000000000001724 261.0
DYD2_k127_567043_5 thymidine kinase K00857 - 2.7.1.21 0.00000000000000000000000000000000000000000000000000000000001392 213.0
DYD2_k127_567043_6 - - - - 0.0000000000000000000000000000000000000000009609 159.0
DYD2_k127_567043_7 Involved in the biosynthesis of the chorismate, which leads to the biosynthesis of aromatic amino acids. Catalyzes the reversible NADPH linked reduction of 3-dehydroshikimate (DHSA) to yield shikimate (SA) K00014 GO:0000166,GO:0003674,GO:0003824,GO:0004764,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006082,GO:0008150,GO:0008152,GO:0009058,GO:0009423,GO:0009987,GO:0016053,GO:0016491,GO:0016614,GO:0016616,GO:0019632,GO:0019752,GO:0032787,GO:0036094,GO:0043436,GO:0043648,GO:0043650,GO:0044237,GO:0044249,GO:0044281,GO:0044283,GO:0044424,GO:0044444,GO:0044464,GO:0046394,GO:0046417,GO:0048037,GO:0050661,GO:0050662,GO:0055114,GO:0071704,GO:0097159,GO:1901265,GO:1901363,GO:1901576,GO:1901615 1.1.1.25 0.0000000000000000000000000001638 126.0
DYD2_k127_567043_8 Catalyzes the deamination of adenosine to inosine at the wobble position 34 of tRNA(Arg2) K11991 - 3.5.4.33 0.000000000000000000000000001718 117.0
DYD2_k127_567043_9 Binds to DNA and alters its conformation. May be involved in regulation of gene expression, nucleoid organization and DNA protection K09747 - - 0.000000000000000000000000005795 113.0
DYD2_k127_567299_0 Bacterial protein of unknown function (DUF885) - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007245 477.0
DYD2_k127_567299_1 PFAM AMP-dependent synthetase K01897 - 6.2.1.3 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001293 477.0
DYD2_k127_567299_10 PFAM pyridoxamine 5'-phosphate oxidase-related - - - 0.000000000000000000001336 99.0
DYD2_k127_567299_11 nucleotide-utilizing enzyme related to molybdopterin-biosynthesis enzyme MoeA - - - 0.0000000405 56.0
DYD2_k127_567299_12 Aminoacyl-tRNA editing domain K19055 - - 0.0000008195 57.0
DYD2_k127_567299_2 Membrane dipeptidase (Peptidase family M19) K01273 - 3.4.13.19 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004552 392.0
DYD2_k127_567299_3 Uncharacterised protein family UPF0052 K11212 - 2.7.8.28 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008066 345.0
DYD2_k127_567299_4 F420-0:Gamma-glutamyl ligase K12234 - 6.3.2.31,6.3.2.34 0.0000000000000000000000000000000000000000000000000000000000000000000000000925 266.0
DYD2_k127_567299_5 Belongs to the adenylyl cyclase class-4 guanylyl cyclase family K01768 - 4.6.1.1 0.00000000000000000000000000000000000000000000000000000000000000000003955 247.0
DYD2_k127_567299_6 Catalyzes the NADPH-dependent formation of L-aspartate- semialdehyde (L-ASA) by the reductive dephosphorylation of L- aspartyl-4-phosphate K00133 - 1.2.1.11 0.00000000000000000000000000000000000000000000000000000000000000002911 244.0
DYD2_k127_567299_7 Luciferase-like monooxygenase - - - 0.000000000000000000000000000000000000000000000000000000247 205.0
DYD2_k127_567299_8 homoserine dehydrogenase K00003,K12524 GO:0003674,GO:0003824,GO:0004412,GO:0006082,GO:0006520,GO:0006566,GO:0006807,GO:0008150,GO:0008152,GO:0008652,GO:0009058,GO:0009066,GO:0009067,GO:0009088,GO:0009987,GO:0016053,GO:0016491,GO:0016614,GO:0016616,GO:0019752,GO:0043436,GO:0044237,GO:0044238,GO:0044249,GO:0044281,GO:0044283,GO:0046394,GO:0055114,GO:0071704,GO:1901564,GO:1901566,GO:1901576,GO:1901605,GO:1901607 1.1.1.3,2.7.2.4 0.00000000000000000000000000000000000000000000008345 186.0
DYD2_k127_567299_9 Guanylyltransferase that catalyzes the activation of 2- phospho-L-lactate (LP) as (2S)-lactyl-2-diphospho-5'-guanosine (LPPG), via the condensation of LP with GTP. Is involved in the biosynthesis of coenzyme F420, a hydride carrier cofactor K14941 - 2.7.7.68 0.0000000000000000000000000000008491 128.0
DYD2_k127_5676694_0 ATPases associated with a variety of cellular activities - - - 0.00000000000000000000000000000000000006686 164.0
DYD2_k127_5676694_1 helix_turn_helix, Lux Regulon - - - 0.00000000000000000000000000009041 135.0
DYD2_k127_5676694_2 histidine kinase, dimerisation and phosphoacceptor region - - - 0.00000000000000000002857 107.0
DYD2_k127_5676694_3 Nodulation protein S (NodS) - - - 0.0000000000001855 72.0
DYD2_k127_571238_0 ABC-type branched-chain amino acid transport systems, periplasmic component K01999,K07407 - 3.2.1.22 1.974e-221 695.0
DYD2_k127_571238_1 von Willebrand factor (vWF) type A domain - - - 3.101e-204 656.0
DYD2_k127_571238_10 Belongs to the binding-protein-dependent transport system permease family K01997,K11956 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000017 417.0
DYD2_k127_571238_11 Luciferase-like monooxygenase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000339 385.0
DYD2_k127_571238_12 ABC-type spermidine putrescine transport system, permease component I K11071 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002201 338.0
DYD2_k127_571238_13 Bacterial extracellular solute-binding protein K11069 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002188 337.0
DYD2_k127_571238_14 Short-chain dehydrogenase reductase sdr K00046 - 1.1.1.69 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006055 321.0
DYD2_k127_571238_15 branched-chain amino acid transmembrane transporter activity K01996 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001197 321.0
DYD2_k127_571238_16 Binding-protein-dependent transport system inner membrane component K11070 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000003918 301.0
DYD2_k127_571238_17 histidine kinase HAMP region domain protein K02484,K07642 - 2.7.13.3 0.00000000000000000000000000000000000000000000000006517 195.0
DYD2_k127_571238_18 NAD dependent epimerase/dehydratase family - - - 0.000000000000000000000000000000000000006448 154.0
DYD2_k127_571238_19 PFAM ABC transporter related K01995,K11957 - - 0.0000000000000000000000000000000000004117 150.0
DYD2_k127_571238_2 Involved in chlorophyll biosynthesis. Catalyzes the insertion of magnesium ion into protoporphyrin IX to yield Mg- protoporphyrin IX K03405 - 6.6.1.1 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002384 600.0
DYD2_k127_571238_20 type IV secretory pathway, VirB11 components, and related ATPases involved in Archaeal flagella biosynthesis - - - 0.00000000000000000000000000000000007645 148.0
DYD2_k127_571238_21 Transcriptional regulatory protein, C terminal K02483,K07659 - - 0.0000000000000000000000000000000002019 138.0
DYD2_k127_571238_22 COG0697 Permeases of the drug metabolite transporter (DMT) superfamily - - - 0.00000000000000000000000000000004488 138.0
DYD2_k127_571238_23 PFAM flavin reductase domain protein FMN-binding K21185 - - 0.0000000000000000000000000000006693 135.0
DYD2_k127_571238_24 Acetyltransferase (GNAT) domain - - - 0.000000000000000000000003969 110.0
DYD2_k127_571238_25 epimerase dehydratase K07071 - - 0.0000000000003217 77.0
DYD2_k127_571238_3 alcohol dehydrogenase K00008,K08322 - 1.1.1.14,1.1.1.380 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001254 568.0
DYD2_k127_571238_4 Aldehyde dehydrogenase family K00128 - 1.2.1.3 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002231 501.0
DYD2_k127_571238_5 L-phenylalanine transmembrane transporter activity K01998 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001289 484.0
DYD2_k127_571238_6 Metallo-beta-lactamase superfamily K05555 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006616 455.0
DYD2_k127_571238_7 acyl-CoA dehydrogenase K00249 - 1.3.8.7 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001622 448.0
DYD2_k127_571238_8 Part of the ABC transporter complex PotABCD involved in spermidine putrescine import. Responsible for energy coupling to the transport system K11072 - 3.6.3.31 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003472 438.0
DYD2_k127_571238_9 Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family K00823 - 2.6.1.19 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007656 426.0
DYD2_k127_5730007_0 Phosphoesterase family K01114 - 3.1.4.3 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001045 478.0
DYD2_k127_5730007_1 4-amino-4-deoxy-L-arabinose transferase activity - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004354 462.0
DYD2_k127_5730007_2 Glycosyltransferase like family 2 K00721 - 2.4.1.83 0.0000000000000000000000000000000000000000000000000000000007133 207.0
DYD2_k127_5730007_5 involved in cell wall biogenesis K00721 - 2.4.1.83 0.0000000009464 71.0
DYD2_k127_5893833_0 Cytochrome c oxidase is the component of the respiratory chain that catalyzes the reduction of oxygen to water. Subunits 1- 3 form the functional core of the enzyme complex. CO I is the catalytic subunit of the enzyme. Electrons originating in cytochrome c are transferred via the copper A center of subunit 2 and heme A of subunit 1 to the bimetallic center formed by heme A3 and copper B K02274 GO:0005575,GO:0005623,GO:0005886,GO:0005887,GO:0006091,GO:0006810,GO:0006811,GO:0006812,GO:0008150,GO:0008152,GO:0009060,GO:0009987,GO:0015672,GO:0015980,GO:0015988,GO:0015990,GO:0016020,GO:0016021,GO:0022900,GO:0022904,GO:0031224,GO:0031226,GO:0034220,GO:0040007,GO:0044237,GO:0044425,GO:0044459,GO:0044464,GO:0045333,GO:0051179,GO:0051234,GO:0055085,GO:0055114,GO:0071944,GO:0098655,GO:0098660,GO:0098662,GO:1902600 1.9.3.1 6.111e-212 671.0
DYD2_k127_5893833_1 Converts 2C-methyl-D-erythritol 2,4-cyclodiphosphate (ME-2,4cPP) into 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate K03526 - 1.17.7.1,1.17.7.3 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004277 607.0
DYD2_k127_5893833_10 Cytochrome c oxidase caa3-type, assembly factor CtaG-related K02351,K07245 - - 0.0000000000000000000000000000000000000000000000000000002424 217.0
DYD2_k127_5893833_11 transport, permease protein K01992 - - 0.000000000000000000000000000000000000000000000000004526 190.0
DYD2_k127_5893833_12 Subunits I and II form the functional core of the enzyme complex. Electrons originating in cytochrome c are transferred via heme a and Cu(A) to the binuclear center formed by heme a3 and Cu(B) K02275 GO:0005575,GO:0005576,GO:0005623,GO:0005886,GO:0005887,GO:0006091,GO:0006119,GO:0006139,GO:0006163,GO:0006725,GO:0006753,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0009117,GO:0009123,GO:0009126,GO:0009141,GO:0009144,GO:0009150,GO:0009161,GO:0009167,GO:0009199,GO:0009205,GO:0009259,GO:0009319,GO:0009987,GO:0015980,GO:0016020,GO:0016021,GO:0016310,GO:0017144,GO:0019637,GO:0019693,GO:0022900,GO:0022904,GO:0031224,GO:0031226,GO:0032991,GO:0034641,GO:0040007,GO:0042773,GO:0044110,GO:0044116,GO:0044117,GO:0044119,GO:0044121,GO:0044237,GO:0044238,GO:0044281,GO:0044403,GO:0044419,GO:0044425,GO:0044459,GO:0044464,GO:0045333,GO:0046034,GO:0046483,GO:0051704,GO:0055086,GO:0055114,GO:0070069,GO:0071704,GO:0071944,GO:0072521,GO:0098796,GO:1901135,GO:1901360,GO:1901564,GO:1902494 1.9.3.1 0.0000000000000000000000000000000000000000001723 172.0
DYD2_k127_5893833_13 Uncharacterized protein conserved in bacteria (DUF2236) - - - 0.000000000000000000000000000000000000000001086 178.0
DYD2_k127_5893833_14 - - - - 0.000000000000000000000000000000000000000007283 179.0
DYD2_k127_5893833_15 Luciferase-like monooxygenase - - - 0.0000000000000000000000000000000000000001437 163.0
DYD2_k127_5893833_16 PFAM Glycerophosphoryl diester phosphodiesterase K01126 - 3.1.4.46 0.000000000000000000000000000000000000004891 156.0
DYD2_k127_5893833_17 Heme copper-type cytochrome quinol oxidase subunit 3 K02276 - 1.9.3.1 0.000000000000000000000000000000000001003 146.0
DYD2_k127_5893833_18 periplasmic protein thiol disulfide oxidoreductases, DsbE subfamily K02199 - - 0.0000000000000000000000000000001476 132.0
DYD2_k127_5893833_19 ACT domain protein - - - 0.0000000000000000000000002527 111.0
DYD2_k127_5893833_2 MMPL family K06994,K20470 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006908 458.0
DYD2_k127_5893833_20 L-carnitine dehydratase bile acid-inducible protein F - - - 0.000000000000000000007122 94.0
DYD2_k127_5893833_21 Cytochrome C biogenesis protein transmembrane region K06196 - - 0.0000000000000000003394 96.0
DYD2_k127_5893833_22 COG0526 Thiol-disulfide isomerase and thioredoxins - - - 0.0000000000000000003601 96.0
DYD2_k127_5893833_23 Bacterial regulatory proteins, tetR family - - - 0.000000000000000007985 93.0
DYD2_k127_5893833_3 Belongs to the class-II pyridine nucleotide-disulfide oxidoreductase family K00384,K03671 GO:0000166,GO:0001666,GO:0003674,GO:0003824,GO:0004791,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006950,GO:0008150,GO:0008152,GO:0009628,GO:0009636,GO:0009987,GO:0015035,GO:0015036,GO:0016209,GO:0016491,GO:0016651,GO:0016667,GO:0016668,GO:0019725,GO:0036094,GO:0036293,GO:0040007,GO:0042221,GO:0042592,GO:0043167,GO:0043168,GO:0044424,GO:0044444,GO:0044464,GO:0045454,GO:0048037,GO:0050660,GO:0050661,GO:0050662,GO:0050789,GO:0050794,GO:0050896,GO:0051716,GO:0055114,GO:0065007,GO:0065008,GO:0070402,GO:0070482,GO:0070887,GO:0097159,GO:0097237,GO:0098754,GO:0098869,GO:1901265,GO:1901363,GO:1990748 1.8.1.9 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003309 424.0
DYD2_k127_5893833_4 Converts heme B (protoheme IX) to heme O by substitution of the vinyl group on carbon 2 of heme B porphyrin ring with a hydroxyethyl farnesyl side group K02257 - 2.5.1.141 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000314 426.0
DYD2_k127_5893833_5 ABC transporter K01990 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005419 340.0
DYD2_k127_5893833_6 Sterol carrier protein domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006264 343.0
DYD2_k127_5893833_7 major pilin protein fima - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000001425 261.0
DYD2_k127_5893833_8 Rhomboid family - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000004073 257.0
DYD2_k127_5893833_9 Major facilitator Superfamily K06902 - - 0.0000000000000000000000000000000000000000000000000000000000000000000009531 254.0
DYD2_k127_5937981_0 Belongs to the peptidase M16 family - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000766 321.0
DYD2_k127_5937981_1 Catalyzes two steps in the biosynthesis of coenzyme A. In the first step cysteine is conjugated to 4'-phosphopantothenate to form 4-phosphopantothenoylcysteine, in the latter compound is decarboxylated to form 4'-phosphopantotheine K01598,K13038 - 4.1.1.36,6.3.2.5 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002337 327.0
DYD2_k127_5937981_2 Catalyzes the condensation of pantoate with beta-alanine in an ATP-dependent reaction via a pantoyl-adenylate intermediate K01918 GO:0003674,GO:0003824,GO:0004592,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006082,GO:0006520,GO:0006573,GO:0006575,GO:0006732,GO:0006766,GO:0006767,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009081,GO:0009108,GO:0009110,GO:0009987,GO:0015939,GO:0015940,GO:0016053,GO:0016874,GO:0016879,GO:0016881,GO:0019752,GO:0032787,GO:0033317,GO:0034641,GO:0042364,GO:0042398,GO:0043436,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0044283,GO:0044424,GO:0044444,GO:0044464,GO:0046394,GO:0051186,GO:0051188,GO:0071704,GO:0072330,GO:1901564,GO:1901566,GO:1901576,GO:1901605 6.3.2.1 0.000000000000000000000000000000000000000000000000000000000000000000008641 245.0
DYD2_k127_5937981_3 Catalyzes the phosphorylation of pantothenate (Pan), the first step in CoA biosynthesis K03525 - 2.7.1.33 0.0000000000000000000000000000000000000000000000000000000000002977 221.0
DYD2_k127_5937981_4 PFAM HhH-GPD family protein - - - 0.00000000000000000000000000000000000000000000000000000001536 203.0
DYD2_k127_5937981_5 Major role in the synthesis of nucleoside triphosphates other than ATP. The ATP gamma phosphate is transferred to the NDP beta phosphate via a ping-pong mechanism, using a phosphorylated active-site intermediate K00940 - 2.7.4.6 0.0000000000000000000000000000000000000000000000001563 187.0
DYD2_k127_5937981_6 - - - - 0.00004757 56.0
DYD2_k127_5937981_7 DRTGG domain K06873 - - 0.0002429 45.0
DYD2_k127_5941973_0 Beta-eliminating lyase K01667 - 4.1.99.1 2.987e-217 682.0
DYD2_k127_5941973_1 protein conserved in bacteria - - - 0.00000000000000000000000000000000000000000000000000000000005369 215.0
DYD2_k127_5941973_2 Repeat of unknown function (DUF346) - - - 0.000000000000000000000000000000000000000004305 161.0
DYD2_k127_5941973_3 Belongs to the MenA family. Type 1 subfamily K02548 - 2.5.1.74 0.000000000000000000000000000000009886 144.0
DYD2_k127_5941973_5 Pyridoxamine 5'-phosphate oxidase - - - 0.0004188 49.0
DYD2_k127_5951566_0 Bifunctional purine biosynthesis protein PurH K00602 - 2.1.2.3,3.5.4.10 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001564 509.0
DYD2_k127_5951566_1 PFAM Glycosyl transferase family 2 K00694 - 2.4.1.12 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002705 468.0
DYD2_k127_5951566_2 TIGRFAM fructose-1,6-bisphosphatase, class II K02446 - 3.1.3.11 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004915 363.0
DYD2_k127_5951566_3 PFAM 7,8-Dihydro-6-hydroxymethylpterin-pyrophosphokinase, HPPK K00950 - 2.7.6.3 0.0000000000000000000000000000001748 129.0
DYD2_k127_5951566_4 trisaccharide binding K03556 - - 0.000000000000000000000002581 111.0
DYD2_k127_6021840_0 Glycosyl hydrolases family 15 - - - 2.226e-311 987.0
DYD2_k127_6021840_1 Aldehyde dehydrogenase family K00140 - 1.2.1.18,1.2.1.27 1.729e-252 791.0
DYD2_k127_6021840_10 Protein of unknown function (DUF4242) - - - 0.0000000000000000000000000000000000006785 141.0
DYD2_k127_6021840_11 Protein of unknown function (DUF4242) - - - 0.000000000000000000000000000000000042 136.0
DYD2_k127_6021840_12 Transfers the N-acyl diglyceride group on what will become the N-terminal cysteine of membrane lipoproteins K13292 - - 0.00000000004264 67.0
DYD2_k127_6021840_2 citrate synthase K01647 - 2.3.3.1 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009511 595.0
DYD2_k127_6021840_3 helix_turn_helix, Lux Regulon - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006867 507.0
DYD2_k127_6021840_4 cystathionine K01739 GO:0000096,GO:0000097,GO:0003674,GO:0003824,GO:0003962,GO:0004123,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005886,GO:0006082,GO:0006520,GO:0006534,GO:0006555,GO:0006790,GO:0006807,GO:0008150,GO:0008152,GO:0008652,GO:0009058,GO:0009066,GO:0009067,GO:0009069,GO:0009070,GO:0009086,GO:0009092,GO:0009987,GO:0016020,GO:0016053,GO:0016740,GO:0016765,GO:0016829,GO:0016846,GO:0017144,GO:0019279,GO:0019343,GO:0019344,GO:0019752,GO:0043436,GO:0044237,GO:0044238,GO:0044249,GO:0044272,GO:0044281,GO:0044283,GO:0044424,GO:0044444,GO:0044464,GO:0046394,GO:0071265,GO:0071266,GO:0071704,GO:0071944,GO:1901564,GO:1901566,GO:1901576,GO:1901605,GO:1901607 2.5.1.48 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002041 438.0
DYD2_k127_6021840_5 Cystathionine beta-synthase K01697 GO:0003674,GO:0005488,GO:0005575,GO:0005576,GO:0005618,GO:0005622,GO:0005623,GO:0005737,GO:0005886,GO:0008144,GO:0016020,GO:0019842,GO:0030170,GO:0030312,GO:0036094,GO:0043167,GO:0043168,GO:0044424,GO:0044464,GO:0048037,GO:0050662,GO:0070279,GO:0071944,GO:0097159,GO:1901363 4.2.1.22 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000372 427.0
DYD2_k127_6021840_6 Catalyzes the reversible oxidation of malate to oxaloacetate K00024 GO:0003674,GO:0003824,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006082,GO:0006091,GO:0006099,GO:0006101,GO:0006107,GO:0006108,GO:0006139,GO:0006725,GO:0006732,GO:0006733,GO:0006734,GO:0006753,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0009060,GO:0009117,GO:0009987,GO:0015980,GO:0016491,GO:0016614,GO:0016615,GO:0016616,GO:0016999,GO:0017144,GO:0019362,GO:0019637,GO:0019674,GO:0019752,GO:0030060,GO:0034641,GO:0043436,GO:0043648,GO:0044237,GO:0044238,GO:0044281,GO:0044424,GO:0044464,GO:0045333,GO:0046483,GO:0046496,GO:0051186,GO:0055086,GO:0055114,GO:0071704,GO:0072350,GO:0072524,GO:1901360,GO:1901564 1.1.1.37 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001105 404.0
DYD2_k127_6021840_7 Catalyzes the conversion of uracil and 5-phospho-alpha- D-ribose 1-diphosphate (PRPP) to UMP and diphosphate K00761 - 2.4.2.9 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000001726 282.0
DYD2_k127_6021840_8 Low molecular weight phosphatase family K03741 - 1.20.4.1 0.00000000000000000000000000000000000000000000000001238 183.0
DYD2_k127_6021840_9 Metallo-beta-lactamase superfamily - - - 0.0000000000000000000000000000000000000000000005399 175.0
DYD2_k127_6046472_0 amino acids such as threonine, to avoid such errors, it has a posttransfer editing activity that hydrolyzes mischarged Thr-tRNA(Val) in a tRNA-dependent manner K01873 - 6.1.1.9 4.647e-226 733.0
DYD2_k127_6046472_1 ATP-dependent specificity component of the Clp protease. It directs the protease to specific substrates. Can perform chaperone functions in the absence of ClpP K03544 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001487 343.0
DYD2_k127_6046472_2 Mechanosensitive ion channel K22044 - - 0.00000000000000000000000000000000000000000000000000000000000000000782 235.0
DYD2_k127_6064317_0 PFAM homogentisate 12-dioxygenase K00451 - 1.13.11.5 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001464 509.0
DYD2_k127_6064317_1 4-Hydroxyphenylpyruvate dioxygenase K00457,K16421 GO:0003674,GO:0003824,GO:0003868,GO:0006082,GO:0006520,GO:0006570,GO:0006572,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0009056,GO:0009063,GO:0009072,GO:0009074,GO:0009987,GO:0016054,GO:0016491,GO:0016701,GO:0016702,GO:0019439,GO:0019752,GO:0043436,GO:0044237,GO:0044238,GO:0044248,GO:0044281,GO:0044282,GO:0046395,GO:0051213,GO:0055114,GO:0071704,GO:1901360,GO:1901361,GO:1901564,GO:1901565,GO:1901575,GO:1901605,GO:1901606 1.13.11.27,1.13.11.46 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006845 497.0
DYD2_k127_6064317_10 PFAM Inosine uridine-preferring nucleoside hydrolase K01239 - 3.2.2.1 0.0000000000000000000000000000000000000000000000000002454 198.0
DYD2_k127_6064317_11 Cobalt transport protein K02008,K16785 - - 0.000000000000000000000000000000000000000000005079 174.0
DYD2_k127_6064317_12 PFAM inositol monophosphatase K01092 - 3.1.3.25 0.00000000000000000000000000000000000000000004347 171.0
DYD2_k127_6064317_13 helix_turn_helix, cAMP Regulatory protein K01420,K10914,K21561,K21564 - - 0.000000000000000000000000000000000000000004548 168.0
DYD2_k127_6064317_14 PFAM NUDIX hydrolase - - - 0.00000000000000000000000000000005025 134.0
DYD2_k127_6064317_15 Transcriptional regulator - - - 0.00000000000000000000000000000007637 131.0
DYD2_k127_6064317_16 TIGRFAM phosphohistidine phosphatase SixA K08296 - - 0.000000000000000000000000009648 121.0
DYD2_k127_6064317_17 phosphorelay sensor kinase activity K16923,K18967 - 2.7.7.65 0.0000000000000000000000003032 113.0
DYD2_k127_6064317_18 FCD - - - 0.000000000000000001051 95.0
DYD2_k127_6064317_19 phosphorelay sensor kinase activity K16923,K18967 - 2.7.7.65 0.0000000000000000058 89.0
DYD2_k127_6064317_2 Catalyzes the anaerobic formation of alpha-ketobutyrate and ammonia from threonine in a two-step reaction. The first step involved a dehydration of threonine and a production of enamine intermediates (aminocrotonate), which tautomerizes to its imine form (iminobutyrate). Both intermediates are unstable and short- lived. The second step is the nonenzymatic hydrolysis of the enamine imine intermediates to form 2-ketobutyrate and free ammonia. In the low water environment of the cell, the second step is accelerated by RidA K01754 - 4.3.1.19 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000635 329.0
DYD2_k127_6064317_20 Biotin carboxylase C-terminal domain K01968,K13777 - 6.4.1.4,6.4.1.5 0.00000000000007486 74.0
DYD2_k127_6064317_21 Hsp20/alpha crystallin family K13993 - - 0.0000000000006481 76.0
DYD2_k127_6064317_22 MFS_1 like family - - - 0.0008427 51.0
DYD2_k127_6064317_3 PFAM pyruvate carboxyltransferase K01640 - 4.1.3.4 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000005103 298.0
DYD2_k127_6064317_4 PFAM histone deacetylase superfamily - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000266 298.0
DYD2_k127_6064317_5 Fumarylacetoacetate (FAA) hydrolase family K16171 - 3.7.1.2 0.000000000000000000000000000000000000000000000000000000000000000000000000000000007508 280.0
DYD2_k127_6064317_6 Phosphorylase superfamily K00772,K03784 - 2.4.2.1,2.4.2.28 0.000000000000000000000000000000000000000000000000000000000000000006244 232.0
DYD2_k127_6064317_7 ATPases associated with a variety of cellular activities K16786,K16787 - - 0.00000000000000000000000000000000000000000000000000000000000000003949 236.0
DYD2_k127_6064317_8 ATPases associated with a variety of cellular activities K16786,K16787 - - 0.000000000000000000000000000000000000000000000000000000000001235 218.0
DYD2_k127_6064317_9 PFAM Glyoxalase bleomycin resistance protein dioxygenase - - - 0.00000000000000000000000000000000000000000000000000000003812 201.0
DYD2_k127_6088973_0 DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates K03043 GO:0000428,GO:0005575,GO:0005622,GO:0005623,GO:0030880,GO:0032991,GO:0044424,GO:0044464,GO:0061695,GO:1902494,GO:1990234 2.7.7.6 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002059 443.0
DYD2_k127_6088973_1 Domain present in phytochromes and cGMP-specific phosphodiesterases. - - - 0.000000000000000000000000000000000000001762 168.0
DYD2_k127_6088973_2 PFAM response regulator receiver - - - 0.000000000000000000000005333 111.0
DYD2_k127_6088973_3 Hemerythrin HHE cation binding domain - - - 0.0000003413 53.0
DYD2_k127_6088973_4 alpha/beta hydrolase fold - - - 0.00001974 56.0
DYD2_k127_6124672_0 adenylyl cyclase class-3 4 guanylyl cyclase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001039 383.0
DYD2_k127_6124672_1 - - - - 0.0000000000000000000000000000000000000000000000000000000000000008757 228.0
DYD2_k127_6124672_2 guanylate cyclase catalytic domain K01768 - 4.6.1.1 0.00000000000000000000000000000000000000000000000001145 190.0
DYD2_k127_6124672_3 Sigma-70, region 4 K03088 - - 0.0000418 49.0
DYD2_k127_6136320_0 With LigD forms a non-homologous end joining (NHEJ) DNA repair enzyme, which repairs dsDNA breaks with reduced fidelity. Binds linear dsDNA with 5'- and 3'- overhangs but not closed circular dsDNA nor ssDNA. Recruits and stimulates the ligase activity of LigD K10979 - - 0.0000000000000000000000000000000000000000000000000000000000007047 223.0
DYD2_k127_6136320_1 Helix-turn-helix type 11 domain protein K13572 - - 0.00000000000000000000000000000000000000000000005176 177.0
DYD2_k127_6136320_2 DNA ligase D, 3'-phosphoesterase domain K01971 - 6.5.1.1 0.000000000000000002414 93.0
DYD2_k127_6136320_3 Adenylate cyclase - - - 0.000000108 62.0
DYD2_k127_6136320_4 Tetratricopeptide repeat - - - 0.00006996 56.0
DYD2_k127_6136320_5 O-Antigen Polymerase K18814 - - 0.0004831 53.0
DYD2_k127_6173756_0 PFAM ComEC Rec2-related protein K02238 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000002665 290.0
DYD2_k127_6173756_1 TIGRFAM DNA polymerase III, delta' subunit K02340 - 2.7.7.7 0.00000000000003573 84.0
DYD2_k127_6173756_2 MacB-like periplasmic core domain - - - 0.000000001074 71.0
DYD2_k127_6173756_3 MobA-like NTP transferase domain K07141 - 2.7.7.76 0.000000001651 66.0
DYD2_k127_6178683_0 Calcineurin-like phosphoesterase K01077 - 3.1.3.1 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003422 359.0
DYD2_k127_6178683_1 Calcineurin-like phosphoesterase K01077 - 3.1.3.1 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001255 361.0
DYD2_k127_6178683_2 Calcineurin-like phosphoesterase - - - 0.0000000000000000000000000000000000002474 147.0
DYD2_k127_6178683_3 Glycosyl hydrolase family 48 - - - 0.000000000000007617 89.0
DYD2_k127_6178683_4 Bacterio-opsin activator HTH domain protein - - - 0.00000000000000874 79.0
DYD2_k127_6225286_0 Belongs to the SEDS family K03588 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001265 332.0
DYD2_k127_6225286_1 PFAM penicillin-binding protein transpeptidase K05364 - - 0.0000000000000000000000000000000000000000000000000001184 203.0
DYD2_k127_6225286_2 PFAM response regulator receiver K02282 - - 0.00000000000000000000000000000000000000000004322 176.0
DYD2_k127_6225286_3 PFAM Forkhead-associated protein - - - 0.000000000000000000000000000000000000001395 159.0
DYD2_k127_6225286_4 Regulatory protein, FmdB family - - - 0.0000000000000000007782 89.0
DYD2_k127_6225286_5 PFAM Forkhead-associated protein - - - 0.000000000000000001274 95.0
DYD2_k127_6225286_6 competence protein - - - 0.0006637 52.0
DYD2_k127_6329320_0 Protein of unknown function, DUF255 K06888 - - 1.424e-197 638.0
DYD2_k127_6329320_1 PFAM ABC transporter related K02056 - 3.6.3.17 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001294 569.0
DYD2_k127_6329320_10 Belongs to the binding-protein-dependent transport system permease family K02057 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000001537 283.0
DYD2_k127_6329320_11 Belongs to the binding-protein-dependent transport system permease family K02057 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000001208 269.0
DYD2_k127_6329320_12 Non-canonical ABC transporter that contains transmembrane domains (TMD), which form a pore in the membrane, and an ATP-binding domain (NBD), which is responsible for energy generation. Confers resistance against macrolides K02003 - - 0.00000000000000000000000000000000000000000000000000000000000000000002148 249.0
DYD2_k127_6329320_13 PFAM basic membrane lipoprotein K07335 - - 0.0000000000000000000000000000000000000000000000000000000000000001678 237.0
DYD2_k127_6329320_14 ABC-type transport system involved in lipoprotein release permease component K02004 - - 0.00000000000000000000000000000000000000000000000000000000002811 224.0
DYD2_k127_6329320_15 Adenosine/AMP deaminase - - - 0.000000000000000000000000000000000000000000000000000000001331 225.0
DYD2_k127_6329320_16 TIGRFAM phosphodiesterase, MJ0936 - - - 0.000000000000000000000000000000000000000000000000001769 191.0
DYD2_k127_6329320_17 Uncharacterised protein family UPF0047 - GO:0005575,GO:0005618,GO:0005623,GO:0030312,GO:0044464,GO:0071944 - 0.000000000000000000000000000000000000000000000000004005 184.0
DYD2_k127_6329320_18 Belongs to the HAD-like hydrolase superfamily K01101 - 3.1.3.41 0.0000000000000000000000000000000000000000001595 173.0
DYD2_k127_6329320_19 pfam nudix K01515 - 3.6.1.13 0.000000000000000000000000000000000000001312 153.0
DYD2_k127_6329320_2 Nucleotidyl transferase K00975 - 2.7.7.27 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001254 485.0
DYD2_k127_6329320_20 COG1668 ABC-type Na efflux pump, permease component - - - 0.000000000000000000000000000000002892 145.0
DYD2_k127_6329320_21 Tetratricopeptide repeat - - - 0.000000000000000000000000002088 117.0
DYD2_k127_6329320_22 PFAM Peptidase M23 K21471 - - 0.000000000000000000000000276 120.0
DYD2_k127_6329320_23 PFAM Glycoside hydrolase, family 38 K01191,K15524 - 3.2.1.170,3.2.1.24 0.00000000000000000000357 98.0
DYD2_k127_6329320_24 GlcNAc-PI de-N-acetylase K22135 - - 0.0000000000000000006792 97.0
DYD2_k127_6329320_25 peptidase A24A prepilin type IV K02654 - 3.4.23.43 0.00000000000000002034 91.0
DYD2_k127_6329320_26 adenylyl cyclase class-3 4 guanylyl cyclase - - - 0.0004482 48.0
DYD2_k127_6329320_27 peptidase - - - 0.0005568 53.0
DYD2_k127_6329320_3 Catalyzes the synthesis of beta-nicotinate D- ribonucleotide from nicotinate and 5-phospho-D-ribose 1-phosphate at the expense of ATP K00763 - 6.3.4.21 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001223 412.0
DYD2_k127_6329320_4 Catalyzes the hydrolytic deamination of adenine to hypoxanthine. Plays an important role in the purine salvage pathway and in nitrogen catabolism K01488 GO:0003674,GO:0003824,GO:0004000,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006139,GO:0006144,GO:0006152,GO:0006154,GO:0006163,GO:0006164,GO:0006725,GO:0006753,GO:0006793,GO:0006796,GO:0006807,GO:0006950,GO:0006974,GO:0008150,GO:0008152,GO:0009056,GO:0009058,GO:0009112,GO:0009113,GO:0009116,GO:0009117,GO:0009119,GO:0009123,GO:0009124,GO:0009126,GO:0009127,GO:0009156,GO:0009161,GO:0009163,GO:0009164,GO:0009165,GO:0009167,GO:0009168,GO:0009987,GO:0015949,GO:0015950,GO:0016787,GO:0016810,GO:0016814,GO:0017144,GO:0018130,GO:0019239,GO:0019438,GO:0019439,GO:0019637,GO:0032261,GO:0033554,GO:0034404,GO:0034641,GO:0034654,GO:0034655,GO:0034656,GO:0042278,GO:0042440,GO:0042451,GO:0042454,GO:0042455,GO:0042737,GO:0043094,GO:0043096,GO:0043101,GO:0043103,GO:0043173,GO:0044237,GO:0044238,GO:0044248,GO:0044249,GO:0044270,GO:0044271,GO:0044281,GO:0044282,GO:0044283,GO:0044424,GO:0044444,GO:0044464,GO:0046085,GO:0046100,GO:0046101,GO:0046102,GO:0046103,GO:0046112,GO:0046128,GO:0046129,GO:0046130,GO:0046148,GO:0046483,GO:0046700,GO:0050896,GO:0051716,GO:0055086,GO:0071704,GO:0072521,GO:0072522,GO:0072523,GO:0090407,GO:1901135,GO:1901136,GO:1901137,GO:1901293,GO:1901360,GO:1901361,GO:1901362,GO:1901564,GO:1901565,GO:1901566,GO:1901575,GO:1901576,GO:1901657,GO:1901658,GO:1901659 3.5.4.4 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004762 347.0
DYD2_k127_6329320_5 Binds and transfers iron-sulfur (Fe-S) clusters to target apoproteins. Can hydrolyze ATP K03593 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006084 340.0
DYD2_k127_6329320_6 PFAM glycosyl transferase, family 51 - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001959 346.0
DYD2_k127_6329320_7 ABC transporter K06147 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000159 304.0
DYD2_k127_6329320_8 Presumably involved in the processing and regular turnover of intracellular proteins. Catalyzes the removal of unsubstituted N-terminal amino acids from various peptides K01255 - 3.4.11.1 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000006646 309.0
DYD2_k127_6329320_9 PFAM ABC transporter related K01990 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000004107 287.0
DYD2_k127_633199_0 COG1249 Pyruvate 2-oxoglutarate dehydrogenase complex, dihydrolipoamide dehydrogenase (E3) component, and related enzymes - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005242 342.0
DYD2_k127_633199_1 PFAM response regulator receiver - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000008234 281.0
DYD2_k127_633199_2 histidine kinase HAMP region domain protein - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000008038 268.0
DYD2_k127_633199_3 Protein of unknown function (DUF429) - - - 0.000000000000000000000000000000000000000000000007011 179.0
DYD2_k127_633199_4 MerR, DNA binding - - - 0.000000000000000000000000000002112 125.0
DYD2_k127_633199_5 cell redox homeostasis - - - 0.000000000000000000005966 101.0
DYD2_k127_633199_6 Toxic component of a toxin-antitoxin (TA) module. An RNase K19686 - - 0.0000000114 57.0
DYD2_k127_633199_7 Short C-terminal domain K08982 - - 0.00000008984 57.0
DYD2_k127_6383736_0 Adenylyl- / guanylyl cyclase, catalytic domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009011 391.0
DYD2_k127_6383736_1 Dihydroorotate dehydrogenase K17723 GO:0003674,GO:0003824,GO:0003954,GO:0006139,GO:0006206,GO:0006208,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0009056,GO:0009112,GO:0009987,GO:0016491,GO:0016651,GO:0034641,GO:0044237,GO:0044238,GO:0044248,GO:0044270,GO:0044281,GO:0046113,GO:0046483,GO:0046700,GO:0055086,GO:0055114,GO:0071704,GO:0072527,GO:0072529,GO:1901360,GO:1901361,GO:1901564,GO:1901565,GO:1901575 1.3.1.1 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007589 368.0
DYD2_k127_6383736_2 Ornithine cyclodeaminase/mu-crystallin family K01750,K19244 - 1.4.1.1,4.3.1.12 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000001403 295.0
DYD2_k127_6383736_3 - - - - 0.00000000000000000000000000000000000000000000000000000000000893 235.0
DYD2_k127_6383736_4 Protein of unknown function (DUF541) K09807 GO:0005575,GO:0005623,GO:0042597,GO:0044464 - 0.00000000000000000000000000000000002844 149.0
DYD2_k127_6383736_5 nitrile biosynthetic process - - - 0.00000000000000000000000003673 123.0
DYD2_k127_6383736_6 Winged helix-turn-helix DNA-binding - - - 0.000000000000000001437 89.0
DYD2_k127_6388819_0 Converts alpha-N-acetylneuranimic acid (Neu5Ac) to the beta-anomer, accelerating the equilibrium between the alpha- and beta-anomers. Probably facilitates sialidase-negative bacteria to compete sucessfully for limited amounts of extracellular Neu5Ac, which is likely taken up in the beta-anomer. In addition, the rapid removal of sialic acid from solution might be advantageous to the bacterium to damp down host responses - - - 1.1e-271 856.0
DYD2_k127_6388819_1 Saccharopine dehydrogenase K00290 - 1.5.1.7 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004123 502.0
DYD2_k127_6388819_10 Pfam Methyltransferase - - - 0.000000000000000000000000000000000000000000003384 179.0
DYD2_k127_6388819_11 ECF sigma factor K03088 - - 0.000000000000000000000000000000000000000003812 163.0
DYD2_k127_6388819_12 Galactose-1-phosphate uridyl transferase, C-terminal domain K00965 - 2.7.7.12 0.00000000000000000000000000000000000002739 157.0
DYD2_k127_6388819_13 Catalyzes the transfer of a ribosyl phosphate group from 5-phosphoribose 1-diphosphate to orotate, leading to the formation of orotidine monophosphate (OMP) K00762 - 2.4.2.10 0.00000000000000000000000000000000000003855 151.0
DYD2_k127_6388819_14 Belongs to the sigma-70 factor family. ECF subfamily K03088 - - 0.0000000000000000000000002084 114.0
DYD2_k127_6388819_15 Bifunctional enzyme that catalyzes the epimerization of the S- and R-forms of NAD(P)HX and the dehydration of the S-form of NAD(P)HX at the expense of ADP, which is converted to AMP. This allows the repair of both epimers of NAD(P)HX, a damaged form of NAD(P)H that is a result of enzymatic or heat-dependent hydration K17758,K17759 - 4.2.1.136,5.1.99.6 0.0000000000000000000000002546 117.0
DYD2_k127_6388819_16 - - - - 0.000000000000000000000001608 107.0
DYD2_k127_6388819_17 Cytochrome C and Quinol oxidase polypeptide I K00404 - 1.9.3.1 0.0000000000000000000001728 112.0
DYD2_k127_6388819_18 Luciferase-like monooxygenase - - - 0.00000005178 57.0
DYD2_k127_6388819_19 galactose-1-phosphate uridylyltransferase K00965 - 2.7.7.12 0.00002074 47.0
DYD2_k127_6388819_2 Belongs to the metallo-dependent hydrolases superfamily. DHOase family. Class I DHOase subfamily K01465 - 3.5.2.3 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004146 355.0
DYD2_k127_6388819_20 Cytochrome c K00368 - 1.7.2.1 0.0000288 53.0
DYD2_k127_6388819_21 Murein-degrading enzyme. May play a role in recycling of muropeptides during cell elongation and or cell division K08304 GO:0000270,GO:0003674,GO:0003824,GO:0004553,GO:0005575,GO:0005623,GO:0005886,GO:0005887,GO:0006022,GO:0006026,GO:0006027,GO:0006807,GO:0008150,GO:0008152,GO:0008933,GO:0009056,GO:0009057,GO:0009253,GO:0009279,GO:0016020,GO:0016021,GO:0016740,GO:0016757,GO:0016787,GO:0016798,GO:0019867,GO:0030203,GO:0030288,GO:0030312,GO:0030313,GO:0031224,GO:0031226,GO:0031975,GO:0042597,GO:0043170,GO:0044425,GO:0044459,GO:0044462,GO:0044464,GO:0061783,GO:0071704,GO:0071944,GO:1901135,GO:1901136,GO:1901564,GO:1901565,GO:1901575 - 0.00005403 47.0
DYD2_k127_6388819_23 Prolyl oligopeptidase family - - - 0.0007616 52.0
DYD2_k127_6388819_3 acetyltransferase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008048 344.0
DYD2_k127_6388819_4 Belongs to the ATCase OTCase family K00609 - 2.1.3.2 0.000000000000000000000000000000000000000000000000000000000000000000000000000000395 284.0
DYD2_k127_6388819_5 ZIP Zinc transporter K16267 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000001067 258.0
DYD2_k127_6388819_6 PFAM Proline dehydrogenase K00318 - - 0.0000000000000000000000000000000000000000000000000000000000000000001147 241.0
DYD2_k127_6388819_7 Regulates the transcription of the pyrimidine nucleotide (pyr) operon in response to exogenous pyrimidines K02825 - 2.4.2.9 0.00000000000000000000000000000000000000000000000000000000001872 232.0
DYD2_k127_6388819_8 B12 binding domain - - - 0.0000000000000000000000000000000000000000000000000000001062 206.0
DYD2_k127_6388819_9 iron dependent repressor - - - 0.0000000000000000000000000000000000000000000001453 174.0
DYD2_k127_6478701_0 Belongs to the aldehyde dehydrogenase family K00128 - 1.2.1.3 6.922e-229 719.0
DYD2_k127_6478701_1 Helix-hairpin-helix DNA-binding, class 1 K02347 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001246 478.0
DYD2_k127_6478701_10 Type II restriction enzyme K01155 - 3.1.21.4 0.0005687 53.0
DYD2_k127_6478701_2 Natural resistance-associated macrophage protein - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001045 399.0
DYD2_k127_6478701_3 MgtE intracellular N domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007249 368.0
DYD2_k127_6478701_4 Aldehyde dehydrogenase K00128 - 1.2.1.3 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000649 358.0
DYD2_k127_6478701_5 ABC transporter K06147 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000001985 265.0
DYD2_k127_6478701_6 GlcNAc-PI de-N-acetylase - - - 0.0000000000000000000000000000000000000000000000000000000000000001014 229.0
DYD2_k127_6478701_7 Tetratricopeptide TPR_2 repeat protein - - - 0.000000000000000000000000000000000000000000000857 177.0
DYD2_k127_6478701_8 Metal-sensitive transcriptional repressor K21600 - - 0.000000000000000008367 96.0
DYD2_k127_6478701_9 Putative stress-induced transcription regulator - - - 0.00000000000000005092 90.0
DYD2_k127_6479030_0 Catalyzes the synthesis of GMP from XMP K01951 - 6.3.5.2 7.864e-216 688.0
DYD2_k127_6479030_1 Participates in initiation and elongation during chromosome replication K02314 GO:0003674,GO:0003678,GO:0003824,GO:0004386,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006139,GO:0006259,GO:0006260,GO:0006261,GO:0006268,GO:0006725,GO:0006807,GO:0006996,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0016043,GO:0016462,GO:0016787,GO:0016817,GO:0016818,GO:0017111,GO:0032392,GO:0032508,GO:0034641,GO:0034645,GO:0043170,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0051276,GO:0071103,GO:0071704,GO:0071840,GO:0090304,GO:0140097,GO:1901360,GO:1901576 3.6.4.12 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006311 480.0
DYD2_k127_6479030_10 binds to the 23S rRNA K02939 GO:0003674,GO:0003676,GO:0003723,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0006412,GO:0006518,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0015934,GO:0019538,GO:0022625,GO:0022626,GO:0032991,GO:0034641,GO:0034645,GO:0043043,GO:0043170,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:0071704,GO:0097159,GO:1901363,GO:1901564,GO:1901566,GO:1901576,GO:1990904 - 0.000000000000000000000000000000002661 136.0
DYD2_k127_6479030_11 Copper binding proteins, plastocyanin/azurin family - - - 0.00000000000000008951 87.0
DYD2_k127_6479030_12 Bacterial transcription activator, effector binding domain - - - 0.00000000000005357 79.0
DYD2_k127_6479030_13 Protein of unknown function (DUF1232) - - - 0.0000000000002353 79.0
DYD2_k127_6479030_14 Winged helix DNA-binding domain - - - 0.00000002557 59.0
DYD2_k127_6479030_2 Plays an important role in the de novo pathway of purine nucleotide biosynthesis. Catalyzes the first committed step in the biosynthesis of AMP from IMP K01939 - 6.3.4.4 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002652 461.0
DYD2_k127_6479030_3 IMP dehydrogenase / GMP reductase domain K00088 - 1.1.1.205 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000405 395.0
DYD2_k127_6479030_4 DNA photolyase domain protein K01669 - 4.1.99.3 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002056 364.0
DYD2_k127_6479030_5 Metallo-beta-lactamase superfamily - - - 0.00000000000000000000000000000000000000000000000000000000000000000005334 245.0
DYD2_k127_6479030_6 COGs COG2141 Coenzyme F420-dependent N5 N10-methylene tetrahydromethanopterin reductase - - - 0.0000000000000000000000000000000000000000000000000000000000000000006143 240.0
DYD2_k127_6479030_7 Represses a number of genes involved in the response to DNA damage (SOS response), including recA and lexA. In the presence of single-stranded DNA, RecA interacts with LexA causing an autocatalytic cleavage which disrupts the DNA-binding part of LexA, leading to derepression of the SOS regulon and eventually DNA repair K01356 GO:0000976,GO:0001067,GO:0001130,GO:0001217,GO:0003674,GO:0003676,GO:0003677,GO:0003690,GO:0003700,GO:0005488,GO:0005575,GO:0006355,GO:0006950,GO:0006974,GO:0007154,GO:0008150,GO:0009432,GO:0009605,GO:0009889,GO:0009890,GO:0009892,GO:0009987,GO:0009991,GO:0010468,GO:0010556,GO:0010558,GO:0010605,GO:0010629,GO:0019219,GO:0019222,GO:0031323,GO:0031324,GO:0031326,GO:0031327,GO:0031668,GO:0032991,GO:0032993,GO:0033554,GO:0043565,GO:0044212,GO:0045892,GO:0045934,GO:0048519,GO:0048523,GO:0050789,GO:0050794,GO:0050896,GO:0051171,GO:0051172,GO:0051252,GO:0051253,GO:0051716,GO:0060255,GO:0065007,GO:0071496,GO:0080090,GO:0097159,GO:0140110,GO:1901363,GO:1902679,GO:1903506,GO:1903507,GO:1990837,GO:2000112,GO:2000113,GO:2001141 3.4.21.88 0.000000000000000000000000000000000000000000000000008535 189.0
DYD2_k127_6479030_8 MOSC domain - - - 0.00000000000000000000000000000000000007049 151.0
DYD2_k127_6479030_9 Probable zinc-ribbon domain - - - 0.00000000000000000000000000000000001695 139.0
DYD2_k127_6486316_0 ATP binding to DnaK triggers the release of the substrate protein, thus completing the reaction cycle. Several rounds of ATP-dependent interactions between DnaJ, DnaK and GrpE are required for fully efficient folding. Also involved, together with DnaK and GrpE, in the DNA replication of plasmids through activation of initiation proteins K03686 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007577 400.0
DYD2_k127_6486316_1 Winged helix DNA-binding domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003404 321.0
DYD2_k127_6486316_2 exodeoxyribonuclease III K01142 - 3.1.11.2 0.000000000000000000000000000000000000000000000000000000000000000000000000000000003108 278.0
DYD2_k127_6486316_3 - - - - 0.0000000000000000000000000000000000000002311 158.0
DYD2_k127_6486316_4 Large-conductance mechanosensitive channel, MscL K03282 - - 0.0000000000000000000000000000002747 128.0
DYD2_k127_6535880_0 COG0160 4-aminobutyrate aminotransferase and related aminotransferases - - - 1.378e-199 647.0
DYD2_k127_6535880_1 DNA ligase K10747 - 6.5.1.1,6.5.1.6,6.5.1.7 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002298 439.0
DYD2_k127_6535880_10 general stress protein B in uncultured methanogenic archaeon (Q0W564) - - - 0.000000000005642 70.0
DYD2_k127_6535880_2 UTP-glucose-1-phosphate uridylyltransferase K00963 - 2.7.7.9 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004939 332.0
DYD2_k127_6535880_3 Serine threonine protein kinase K12132 - 2.7.11.1 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002 325.0
DYD2_k127_6535880_4 PFAM Mur ligase family, glutamate ligase domain K11754 - 6.3.2.12,6.3.2.17 0.000000000000000000000000000000000000000000000000000000000000000000000000000000005544 287.0
DYD2_k127_6535880_5 PFAM Oxidoreductase, molybdopterin binding - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000001428 254.0
DYD2_k127_6535880_6 dihydropteroate synthase K00796 - 2.5.1.15 0.00000000000000000000000000000000000000000000000000000000000000004809 248.0
DYD2_k127_6535880_7 Belongs to the thioredoxin family K03671 - - 0.0000000000000000000000000000000001125 137.0
DYD2_k127_6535880_8 PFAM peptidase S1 and S6, chymotrypsin Hap K08070 - 1.3.1.74 0.00000000000000000000000000008908 119.0
DYD2_k127_6535880_9 Catalyzes the conversion of 7,8-dihydroneopterin to 6- hydroxymethyl-7,8-dihydropterin K01633 - 1.13.11.81,4.1.2.25,5.1.99.8 0.00000000000000000001508 98.0
DYD2_k127_654832_0 Part of the phosphoribosylformylglycinamidine synthase complex involved in the purines biosynthetic pathway. Catalyzes the ATP-dependent conversion of formylglycinamide ribonucleotide (FGAR) and glutamine to yield formylglycinamidine ribonucleotide (FGAM) and glutamate. The FGAM synthase complex is composed of three subunits. PurQ produces an ammonia molecule by converting glutamine to glutamate. PurL transfers the ammonia molecule to FGAR to form FGAM in an ATP-dependent manner. PurS interacts with PurQ and PurL and is thought to assist in the transfer of the ammonia molecule from PurQ to PurL K01952 - 6.3.5.3 1.066e-214 691.0
DYD2_k127_654832_1 Uncharacterised protein family (UPF0182) K09118 GO:0005575,GO:0005576,GO:0005618,GO:0005623,GO:0005886,GO:0005887,GO:0016020,GO:0016021,GO:0030312,GO:0031224,GO:0031226,GO:0044425,GO:0044459,GO:0044464,GO:0071944 - 1.027e-208 684.0
DYD2_k127_654832_10 MOSC domain - - - 0.000000000000000000000000000000000003257 145.0
DYD2_k127_654832_11 Mg2 transporter-C family protein K07507 - - 0.00000000000000000000000000001402 136.0
DYD2_k127_654832_12 Part of the phosphoribosylformylglycinamidine synthase complex involved in the purines biosynthetic pathway. Catalyzes the ATP-dependent conversion of formylglycinamide ribonucleotide (FGAR) and glutamine to yield formylglycinamidine ribonucleotide (FGAM) and glutamate. The FGAM synthase complex is composed of three subunits. PurQ produces an ammonia molecule by converting glutamine to glutamate. PurL transfers the ammonia molecule to FGAR to form FGAM in an ATP-dependent manner. PurS interacts with PurQ and PurL and is thought to assist in the transfer of the ammonia molecule from PurQ to PurL K01952 - 6.3.5.3 0.00000000000000004095 85.0
DYD2_k127_654832_13 Zinc finger domain - - - 0.000003033 59.0
DYD2_k127_654832_2 Endonuclease/Exonuclease/phosphatase family - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004275 548.0
DYD2_k127_654832_3 Belongs to the lyase 1 family. Adenylosuccinate lyase subfamily K01756 - 4.3.2.2 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003919 453.0
DYD2_k127_654832_4 Coenzyme F420-dependent N5,N10-methylene tetrahydromethanopterin reductase and related flavin-dependent oxidoreductases - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000527 361.0
DYD2_k127_654832_5 SAICAR synthetase K01923 - 6.3.2.6 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005059 349.0
DYD2_k127_654832_6 Belongs to the GARS family K01945 - 6.3.4.13 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001553 355.0
DYD2_k127_654832_7 Part of the phosphoribosylformylglycinamidine synthase complex involved in the purines biosynthetic pathway. Catalyzes the ATP-dependent conversion of formylglycinamide ribonucleotide (FGAR) and glutamine to yield formylglycinamidine ribonucleotide (FGAM) and glutamate. The FGAM synthase complex is composed of three subunits. PurQ produces an ammonia molecule by converting glutamine to glutamate. PurL transfers the ammonia molecule to FGAR to form FGAM in an ATP-dependent manner. PurS interacts with PurQ and PurL and is thought to assist in the transfer of the ammonia molecule from PurQ to PurL K01952 - 6.3.5.3 0.0000000000000000000000000000000000000000000000000000000000000000000000000002018 268.0
DYD2_k127_654832_8 TIGRFAM Diguanylate cyclase - - - 0.00000000000000000000000000000000000000000000000000000000000001193 231.0
DYD2_k127_654832_9 Catalyzes the conversion of N5-carboxyaminoimidazole ribonucleotide (N5-CAIR) to 4-carboxy-5-aminoimidazole ribonucleotide (CAIR) K01588 - 5.4.99.18 0.000000000000000000000000000000000000000001057 163.0
DYD2_k127_6582955_0 Component of the pyruvate dehydrogenase (PDH) complex, that catalyzes the overall conversion of pyruvate to acetyl-CoA and CO(2) K00163 - 1.2.4.1 0.0 1084.0
DYD2_k127_6582955_1 Amino acid permease - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009933 593.0
DYD2_k127_6582955_10 Cysteine-rich secretory protein family - - - 0.00000000000001595 83.0
DYD2_k127_6582955_11 Putative adhesin - - - 0.0000000000002101 81.0
DYD2_k127_6582955_12 ATP binding to DnaK triggers the release of the substrate protein, thus completing the reaction cycle. Several rounds of ATP-dependent interactions between DnaJ, DnaK and GrpE are required for fully efficient folding. Also involved, together with DnaK and GrpE, in the DNA replication of plasmids through activation of initiation proteins K03686 GO:0006457,GO:0008150,GO:0009987 - 0.0000003164 61.0
DYD2_k127_6582955_2 PFAM ABC transporter related K01990 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003501 333.0
DYD2_k127_6582955_3 PFAM ABC transporter related K02003 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000001516 261.0
DYD2_k127_6582955_4 FtsX-like permease family K02004 - - 0.000000000000000000000000000000000000000000000000000000001359 228.0
DYD2_k127_6582955_5 ABC-2 type transporter - - - 0.00000000000000000000000000000000000000002346 164.0
DYD2_k127_6582955_6 PFAM ABC-2 type transporter K01992 - - 0.00000000000000000000000000000000000003271 153.0
DYD2_k127_6582955_7 Domain of unknown function (DUF296) K06934 - - 0.000000000000000000000000000005215 124.0
DYD2_k127_6582955_8 Protein of unknown function (DUF2089) - - - 0.0000000000000000000000000127 117.0
DYD2_k127_6582955_9 4-amino-4-deoxy-L-arabinose transferase and related glycosyltransferases of PMT family - - - 0.00000000000000002125 95.0
DYD2_k127_6610470_0 Acetyl-CoA carboxylase, carboxyltransferase component (subunits alpha and beta) K01969 - 6.4.1.4 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001381 542.0
DYD2_k127_6610470_1 Enoyl-CoA hydratase/isomerase K13766,K13779 - 4.2.1.18,4.2.1.57 0.00000000000000000000000000000000000000000000000000000000001365 224.0
DYD2_k127_6610470_2 - - - - 0.00000000000000000000000000000004528 132.0
DYD2_k127_6610470_3 Acetyl propionyl-CoA carboxylase alpha subunit K11263 - 6.3.4.14,6.4.1.2,6.4.1.3 0.0000000000000000000000000000001159 131.0
DYD2_k127_6610470_4 Glyoxalase-like domain - - - 0.0000000000000008694 87.0
DYD2_k127_6709374_0 Catalyzes the last two sequential reactions in the de novo biosynthetic pathway for UDP-N-acetylglucosamine (UDP- GlcNAc). The C-terminal domain catalyzes the transfer of acetyl group from acetyl coenzyme A to glucosamine-1-phosphate (GlcN-1-P) to produce N-acetylglucosamine-1-phosphate (GlcNAc-1-P), which is converted into UDP-GlcNAc by the transfer of uridine 5- monophosphate (from uridine 5-triphosphate), a reaction catalyzed by the N-terminal domain K04042 - 2.3.1.157,2.7.7.23 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001142 413.0
DYD2_k127_6709374_1 Required for the formation of a threonylcarbamoyl group on adenosine at position 37 (t(6)A37) in tRNAs that read codons beginning with adenine. Is involved in the transfer of the threonylcarbamoyl moiety of threonylcarbamoyl-AMP (TC-AMP) to the N6 group of A37, together with TsaE and TsaB. TsaD likely plays a direct catalytic role in this reaction K01409 - 2.3.1.234 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005347 358.0
DYD2_k127_6709374_2 CBS domain K03699 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000001608 297.0
DYD2_k127_6709374_3 Belongs to the FPP GGPP synthase family K13787 - 2.5.1.1,2.5.1.10,2.5.1.29 0.0000000000000000000000000000000000000000000000000000000000000000000000000002354 274.0
DYD2_k127_6709374_4 Specifically dimethylates two adjacent adenosines (A1518 and A1519) in the loop of a conserved hairpin near the 3'-end of 16S rRNA in the 30S particle. May play a critical role in biogenesis of 30S subunits K02528 - 2.1.1.182 0.0000000000000000000000000000000000000000000000000000000000007511 234.0
DYD2_k127_6709374_5 endoribonuclease L-PSP K09022 - 3.5.99.10 0.00000000000000000000000000000000000000134 152.0
DYD2_k127_6709374_6 Ribosomal-protein-alanine acetyltransferase K03789 - 2.3.1.128 0.00000000000000000000000000000006375 127.0
DYD2_k127_6709374_7 Catalyzes the phosphorylation of the position 2 hydroxy group of 4-diphosphocytidyl-2C-methyl-D-erythritol K00919 GO:0003674,GO:0003824,GO:0006793,GO:0006796,GO:0008150,GO:0008152,GO:0009987,GO:0016301,GO:0016310,GO:0016740,GO:0016772,GO:0016773,GO:0040007,GO:0044237,GO:0050515 2.7.1.148 0.000000000000000000000000000006582 131.0
DYD2_k127_6709374_8 Involved in DNA repair and RecF pathway recombination K03584 - - 0.000000000000000000000000003736 115.0
DYD2_k127_710665_0 Catalyzes the interconversion of 2-phosphoglycerate and 3-phosphoglycerate K15633 - 5.4.2.12 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006706 514.0
DYD2_k127_710665_1 Required for morphogenesis under gluconeogenic growth conditions - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003075 367.0
DYD2_k127_710665_10 May be required for sporulation K09762 - - 0.000000000000000000000000000000000008094 149.0
DYD2_k127_710665_11 Preprotein translocase SecG subunit K03075 - - 0.00000000003881 74.0
DYD2_k127_710665_12 Part of the twin-arginine translocation (Tat) system that transports large folded proteins containing a characteristic twin-arginine motif in their signal peptide across membranes. TatA could form the protein-conducting channel of the Tat system K03116 - - 0.0000000002646 73.0
DYD2_k127_710665_13 Belongs to the peptidase M48B family K03799 - - 0.000003721 52.0
DYD2_k127_710665_2 single-stranded-DNA-specific exonuclease RecJ K07462 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007265 333.0
DYD2_k127_710665_3 Displays ATPase and GTPase activities K06958 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000004162 259.0
DYD2_k127_710665_4 Histone deacetylase domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000008034 254.0
DYD2_k127_710665_5 Involved in the gluconeogenesis. Catalyzes stereospecifically the conversion of dihydroxyacetone phosphate (DHAP) to D-glyceraldehyde-3-phosphate (G3P) K01803 - 5.3.1.1 0.0000000000000000000000000000000000000000000000000000000000002677 220.0
DYD2_k127_710665_6 LemA family K03744 - - 0.0000000000000000000000000000000000000000000000000000002551 199.0
DYD2_k127_710665_7 Belongs to the OMP decarboxylase family. Type 2 subfamily K01591 - 4.1.1.23 0.0000000000000000000000000000000000000000000000002861 196.0
DYD2_k127_710665_8 Part of the twin-arginine translocation (Tat) system that transports large folded proteins containing a characteristic twin-arginine motif in their signal peptide across membranes K03118 - - 0.000000000000000000000000000000000000000001116 165.0
DYD2_k127_710665_9 Part of the Sec protein translocase complex. Interacts with the SecYEG preprotein conducting channel. SecDF uses the proton motive force (PMF) to complete protein translocation after the ATP-dependent function of SecA K03074 - - 0.0000000000000000000000000000000000003387 143.0
DYD2_k127_711567_0 PFAM UvrD REP helicase K03657 - 3.6.4.12 3.013e-201 652.0
DYD2_k127_711567_1 DNA ligase that catalyzes the formation of phosphodiester linkages between 5'-phosphoryl and 3'-hydroxyl groups in double-stranded DNA using NAD as a coenzyme and as the energy source for the reaction. It is essential for DNA replication and repair of damaged DNA K01972 - 6.5.1.2 3.121e-197 636.0
DYD2_k127_711567_10 SnoaL-like domain - - - 0.0000000000000002168 84.0
DYD2_k127_711567_11 Aminotransferase K10907 - - 0.0000000000001942 72.0
DYD2_k127_711567_12 Protein of unknown function (DUF1706) - - - 0.000000005147 64.0
DYD2_k127_711567_13 Alpha beta hydrolase - - - 0.00000001923 65.0
DYD2_k127_711567_14 Domain of unknown function (DUF4268) - - - 0.0000006996 60.0
DYD2_k127_711567_15 - - - - 0.00002915 54.0
DYD2_k127_711567_2 Allows the formation of correctly charged Gln-tRNA(Gln) through the transamidation of misacylated Glu-tRNA(Gln) in organisms which lack glutaminyl-tRNA synthetase. The reaction takes place in the presence of glutamine and ATP through an activated gamma-phospho-Glu-tRNA(Gln) K02433 GO:0008150,GO:0040007 6.3.5.6,6.3.5.7 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003179 589.0
DYD2_k127_711567_3 TIGRFAM Na H antiporter, bacterial form K03316 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008559 455.0
DYD2_k127_711567_4 transmembrane transporter activity - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002581 372.0
DYD2_k127_711567_5 COG2513 PEP phosphonomutase and related enzymes - - - 0.000000000000000000000000000000000000000000000000000000000000000001305 236.0
DYD2_k127_711567_6 Protein of unknown function (DUF1684) K09164 - - 0.0000000000000000000000000000000000000000000000000000000000001737 223.0
DYD2_k127_711567_7 - - - - 0.00000000000000000000000006847 111.0
DYD2_k127_711567_8 Allows the formation of correctly charged Asn-tRNA(Asn) or Gln-tRNA(Gln) through the transamidation of misacylated Asp- tRNA(Asn) or Glu-tRNA(Gln) in organisms which lack either or both of asparaginyl-tRNA or glutaminyl-tRNA synthetases. The reaction takes place in the presence of glutamine and ATP through an activated phospho-Asp-tRNA(Asn) or phospho-Glu-tRNA(Gln) K02435 - 6.3.5.6,6.3.5.7 0.000000000000000000004157 95.0
DYD2_k127_711567_9 Transcriptional regulator - - - 0.00000000000000008951 87.0
DYD2_k127_715223_0 Involved in targeting and insertion of nascent membrane proteins into the cytoplasmic membrane. Binds to the hydrophobic signal sequence of the ribosome-nascent chain (RNC) as it emerges from the ribosomes. The SRP-RNC complex is then targeted to the cytoplasmic membrane where it interacts with the SRP receptor FtsY K03106 - 3.6.5.4 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000823 504.0
DYD2_k127_715223_1 Critical role in recombination and DNA repair. Helps process Holliday junction intermediates to mature products by catalyzing branch migration. Has a DNA unwinding activity characteristic of a DNA helicase with a 3'- to 5'- polarity. Unwinds branched duplex DNA (Y-DNA) K03655 - 3.6.4.12 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008878 496.0
DYD2_k127_715223_10 Reversibly transfers an adenylyl group from ATP to 4'- phosphopantetheine, yielding dephospho-CoA (dPCoA) and pyrophosphate K00954 - 2.7.7.3 0.0000000000000000000000000000000000000000000000003043 181.0
DYD2_k127_715223_11 rejects L-amino acids rather than detecting D-amino acids in the active site. By recycling D-aminoacyl-tRNA to D-amino acids and free tRNA molecules, this enzyme counteracts the toxicity associated with the formation of D-aminoacyl-tRNA entities in vivo and helps enforce protein L-homochirality K07560 - - 0.0000000000000000000000000000000000000000001986 164.0
DYD2_k127_715223_12 This protein is located at the 30S-50S ribosomal subunit interface and may play a role in the structure and function of the aminoacyl-tRNA binding site K02884 - - 0.0000000000000000000000000000000000000004868 151.0
DYD2_k127_715223_13 Conserved hypothetical protein 95 K08316 - 2.1.1.171 0.00000000000000000000000000000007662 132.0
DYD2_k127_715223_14 Transglycosylase SLT domain - - - 0.00000000000000000000000000001896 125.0
DYD2_k127_715223_15 Uncharacterized ACR, COG1399 K07040 - - 0.00000000000000000000000000002219 131.0
DYD2_k127_715223_16 An accessory protein needed during the final step in the assembly of 30S ribosomal subunit, possibly for assembly of the head region. Probably interacts with S19. Essential for efficient processing of 16S rRNA. May be needed both before and after RbfA during the maturation of 16S rRNA. It has affinity for free ribosomal 30S subunits but not for 70S ribosomes K02860 - - 0.0000000000000000000000000004672 119.0
DYD2_k127_715223_17 Carrier of the growing fatty acid chain in fatty acid biosynthesis K02078 GO:0000035,GO:0000036,GO:0003674,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005975,GO:0006082,GO:0006629,GO:0006631,GO:0006633,GO:0006643,GO:0006644,GO:0006664,GO:0006793,GO:0006796,GO:0008150,GO:0008152,GO:0008610,GO:0008654,GO:0009058,GO:0009245,GO:0009247,GO:0009311,GO:0009312,GO:0009987,GO:0016051,GO:0016053,GO:0019637,GO:0019752,GO:0019842,GO:0031177,GO:0032787,GO:0033218,GO:0036094,GO:0043167,GO:0043168,GO:0043436,GO:0044237,GO:0044238,GO:0044249,GO:0044255,GO:0044281,GO:0044283,GO:0044424,GO:0044444,GO:0044464,GO:0044620,GO:0046394,GO:0046467,GO:0046493,GO:0048037,GO:0051192,GO:0071704,GO:0072330,GO:0072341,GO:0090407,GO:0140104,GO:1901135,GO:1901137,GO:1901269,GO:1901271,GO:1901576,GO:1903509 - 0.0000000000000000000000000341 109.0
DYD2_k127_715223_18 mitochondrial translation K02959 GO:0000028,GO:0000217,GO:0000400,GO:0003674,GO:0003676,GO:0003677,GO:0003735,GO:0003824,GO:0004518,GO:0004519,GO:0004520,GO:0004536,GO:0005198,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0005886,GO:0006139,GO:0006259,GO:0006412,GO:0006518,GO:0006725,GO:0006807,GO:0006996,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0015935,GO:0016020,GO:0016043,GO:0016787,GO:0016788,GO:0019538,GO:0022607,GO:0022613,GO:0022618,GO:0022626,GO:0022627,GO:0032991,GO:0034622,GO:0034641,GO:0034645,GO:0042254,GO:0042255,GO:0042274,GO:0043043,GO:0043170,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043603,GO:0043604,GO:0043933,GO:0044085,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:0046483,GO:0065003,GO:0070925,GO:0071704,GO:0071826,GO:0071840,GO:0071944,GO:0090304,GO:0090305,GO:0097159,GO:0140097,GO:1901360,GO:1901363,GO:1901564,GO:1901566,GO:1901576,GO:1990904 - 0.000000000000000000000002726 108.0
DYD2_k127_715223_19 Component of the F(0) channel, it forms part of the peripheral stalk, linking F(1) to F(0) - - - 0.000000000000000002321 94.0
DYD2_k127_715223_2 Required for chromosome condensation and partitioning K03529 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003745 432.0
DYD2_k127_715223_20 Belongs to the UPF0102 family K07460 - - 0.0000000000000000305 86.0
DYD2_k127_715223_21 Belongs to the bacterial ribosomal protein bL32 family K02911 GO:0003674,GO:0003735,GO:0005198 - 0.00000000000000004771 82.0
DYD2_k127_715223_22 Belongs to the UPF0109 family K06960 - - 0.000000000000009557 81.0
DYD2_k127_715223_23 Protein of unknown function (DUF3352) - - - 0.00000003648 66.0
DYD2_k127_715223_24 Belongs to the bacterial ribosomal protein bL28 family K02902 GO:0003674,GO:0003735,GO:0005198 - 0.00000005841 56.0
DYD2_k127_715223_25 Involved in transcription antitermination. Required for transcription of ribosomal RNA (rRNA) genes. Binds specifically to the boxA antiterminator sequence of the ribosomal RNA (rrn) operons K03625 - - 0.00000161 56.0
DYD2_k127_715223_3 Catalyzes the reversible formation of acyl-phosphate (acyl-PO(4)) from acyl- acyl-carrier-protein (acyl-ACP). This enzyme utilizes acyl-ACP as fatty acyl donor, but not acyl-CoA K03621 - 2.3.1.15 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000001099 306.0
DYD2_k127_715223_4 Belongs to the RNA methyltransferase TrmD family K00554,K01770 GO:0000287,GO:0001510,GO:0002939,GO:0003674,GO:0003824,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006139,GO:0006396,GO:0006399,GO:0006400,GO:0006725,GO:0006807,GO:0008033,GO:0008150,GO:0008152,GO:0008168,GO:0008173,GO:0008175,GO:0008757,GO:0009019,GO:0009451,GO:0009987,GO:0010467,GO:0016070,GO:0016423,GO:0016740,GO:0016741,GO:0016772,GO:0016779,GO:0030488,GO:0032259,GO:0034470,GO:0034641,GO:0034660,GO:0040007,GO:0042802,GO:0043167,GO:0043169,GO:0043170,GO:0043412,GO:0043414,GO:0044237,GO:0044238,GO:0044260,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0046872,GO:0050518,GO:0052906,GO:0070567,GO:0071704,GO:0090304,GO:0140098,GO:0140101,GO:1901360 2.1.1.228,4.6.1.12 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000001096 289.0
DYD2_k127_715223_5 Putative glycosyl hydrolase domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000007568 296.0
DYD2_k127_715223_6 Involved in targeting and insertion of nascent membrane proteins into the cytoplasmic membrane. Acts as a receptor for the complex formed by the signal recognition particle (SRP) and the ribosome-nascent chain (RNC) K03110 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000003048 281.0
DYD2_k127_715223_7 Belongs to the ribulose-phosphate 3-epimerase family K01783 - 5.1.3.1 0.000000000000000000000000000000000000000000000000000000001263 208.0
DYD2_k127_715223_8 Endonuclease that specifically degrades the RNA of RNA- DNA hybrids K03470 - 3.1.26.4 0.00000000000000000000000000000000000000000000000000000001717 211.0
DYD2_k127_715223_9 Digests double-stranded RNA. Involved in the processing of primary rRNA transcript to yield the immediate precursors to the large and small rRNAs (23S and 16S). Processes some mRNAs, and tRNAs when they are encoded in the rRNA operon. Processes pre- crRNA and tracrRNA of type II CRISPR loci if present in the organism K03685 GO:0003674,GO:0003676,GO:0003723,GO:0003725,GO:0003824,GO:0004518,GO:0004519,GO:0004521,GO:0004525,GO:0004540,GO:0005488,GO:0006139,GO:0006396,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0009987,GO:0010467,GO:0016070,GO:0016787,GO:0016788,GO:0016891,GO:0016893,GO:0032296,GO:0034641,GO:0043170,GO:0044237,GO:0044238,GO:0046483,GO:0071704,GO:0090304,GO:0090305,GO:0090501,GO:0090502,GO:0097159,GO:0140098,GO:1901360,GO:1901363 3.1.26.3 0.00000000000000000000000000000000000000000000000007122 186.0
DYD2_k127_717742_0 Winged helix DNA-binding domain K09927 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007093 495.0
DYD2_k127_717742_1 Peptidase family M3 K01392 - 3.4.24.15 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002352 478.0
DYD2_k127_717742_10 Domain of unknown function (DUF1905) - - - 0.000000000000000000000000000000005591 129.0
DYD2_k127_717742_11 Transcriptional regulator - - - 0.0000000000000000000000000000002156 126.0
DYD2_k127_717742_12 diguanylate cyclase - - - 0.0000000000000000000000000002603 130.0
DYD2_k127_717742_13 - - - - 0.000000000000000000000000004543 114.0
DYD2_k127_717742_14 DinB family - - - 0.0000000000000000000000002304 118.0
DYD2_k127_717742_15 Cbs domain - - - 0.0000000000000000002133 92.0
DYD2_k127_717742_16 heat shock protein binding K03686 - - 0.0000000004355 67.0
DYD2_k127_717742_17 glyoxalase bleomycin resistance protein dioxygenase - - - 0.0000005871 56.0
DYD2_k127_717742_2 Adenylyl- / guanylyl cyclase, catalytic domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004783 422.0
DYD2_k127_717742_3 Alpha/beta hydrolase family - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001942 364.0
DYD2_k127_717742_4 Winged helix DNA-binding domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007875 331.0
DYD2_k127_717742_5 Alpha/beta hydrolase family - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000006217 267.0
DYD2_k127_717742_6 DNA binding - - - 0.000000000000000000000000000000000000000000000000000000000000003288 227.0
DYD2_k127_717742_7 PFAM alpha beta hydrolase fold K01259 - 3.4.11.5 0.0000000000000000000000000000000000000000000000000000000001301 214.0
DYD2_k127_717742_8 Activator of Hsp90 ATPase homolog 1-like protein - - - 0.0000000000000000000000000000000000000000000000000000003687 198.0
DYD2_k127_717742_9 DNA-directed DNA polymerase activity K02337 GO:0005575,GO:0005618,GO:0005623,GO:0005886,GO:0008150,GO:0016020,GO:0030312,GO:0040007,GO:0044464,GO:0071944 2.7.7.7 0.00000000000000000000000000000000000000000000000003758 183.0
DYD2_k127_758487_0 Fe-S oxidoreductase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007291 528.0
DYD2_k127_758487_1 PFAM Aminotransferase class-III K01845 - 5.4.3.8 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001229 432.0
DYD2_k127_758487_2 Acyl-CoA dehydrogenase, middle domain K00248,K00249 - 1.3.8.1,1.3.8.7 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001808 402.0
DYD2_k127_758487_3 Catalyzes the conversion of (8S)-3',8-cyclo-7,8- dihydroguanosine 5'-triphosphate to cyclic pyranopterin monophosphate (cPMP) K03637 - 4.6.1.17 0.00000000000000000000000000000000000000000000000000000000000000000000005667 248.0
DYD2_k127_758487_4 Electron transfer flavoprotein K03521 - - 0.000000000000000000000000000000000000000000000000000001873 202.0
DYD2_k127_758487_5 Membrane - - - 0.00000000000000000000000000000000000000000000000007049 189.0
DYD2_k127_758487_6 Electron transfer flavoprotein domain K03522 GO:0005575,GO:0005618,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005886,GO:0016020,GO:0030312,GO:0044424,GO:0044444,GO:0044464,GO:0071944 - 0.000000000000000000000000000000000000000000003151 176.0
DYD2_k127_758487_7 AsnC family K03718 - - 0.000000000000000000000000000000000000000000003611 169.0
DYD2_k127_867731_0 Facilitates transcription termination by a mechanism that involves Rho binding to the nascent RNA, activation of Rho's RNA-dependent ATPase activity, and release of the mRNA from the DNA template K03628 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003719 579.0
DYD2_k127_867731_1 Catalyzes the ATP-dependent amination of UTP to CTP with either L-glutamine or ammonia as the source of nitrogen. Regulates intracellular CTP levels through interactions with the four ribonucleotide triphosphates K01937 - 6.3.4.2 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001001 456.0
DYD2_k127_867731_2 An essential GTPase which binds GTP, GDP and possibly (p)ppGpp with moderate affinity, with high nucleotide exchange rates and a fairly low GTP hydrolysis rate. Plays a role in control of the cell cycle, stress response, ribosome biogenesis and in those bacteria that undergo differentiation, in morphogenesis control K03979 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006893 404.0
DYD2_k127_867731_3 Oligoendopeptidase f K01283 - 3.4.15.1 0.00000000000000000000000000000000000000000000000000000000000000000000000002705 270.0
DYD2_k127_867731_4 Catalyzes the reversible adenylation of nicotinate mononucleotide (NaMN) to nicotinic acid adenine dinucleotide (NaAD) K00969 GO:0000309,GO:0003674,GO:0003824,GO:0004515,GO:0006082,GO:0006139,GO:0006520,GO:0006531,GO:0006725,GO:0006732,GO:0006733,GO:0006753,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009066,GO:0009108,GO:0009117,GO:0009165,GO:0009435,GO:0009987,GO:0016740,GO:0016772,GO:0016779,GO:0018130,GO:0019355,GO:0019359,GO:0019362,GO:0019363,GO:0019438,GO:0019637,GO:0019674,GO:0019752,GO:0034627,GO:0034628,GO:0034641,GO:0034654,GO:0043436,GO:0043648,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0046483,GO:0046496,GO:0051186,GO:0051188,GO:0055086,GO:0070566,GO:0071704,GO:0072524,GO:0072525,GO:0090407,GO:1901293,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576,GO:1901605 2.7.7.18 0.000000000000000000000000000000000000000000001079 182.0
DYD2_k127_867731_5 Functions as a ribosomal silencing factor. Interacts with ribosomal protein L14 (rplN), blocking formation of intersubunit bridge B8. Prevents association of the 30S and 50S ribosomal subunits and the formation of functional ribosomes, thus repressing translation K09710 - - 0.0000000000000000000000000005948 130.0
DYD2_k127_867731_6 PFAM Peptidase family M23 - - - 0.000000000000000000000000001195 124.0
DYD2_k127_867731_7 N-Acetylmuramoyl-L-alanine amidase K01448 - 3.5.1.28 0.000000000000000002903 100.0
DYD2_k127_867731_8 TIGRFAM DNA polymerase III, delta' subunit K02340 - 2.7.7.7 0.00000000004211 70.0
DYD2_k127_880195_0 Involved in mRNA degradation. Catalyzes the phosphorolysis of single-stranded polyribonucleotides processively in the 3'- to 5'-direction K00962 GO:0003674,GO:0003676,GO:0003723,GO:0003729,GO:0003824,GO:0004654,GO:0005488,GO:0006139,GO:0006401,GO:0006402,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0009056,GO:0009057,GO:0009892,GO:0009987,GO:0010468,GO:0010605,GO:0010629,GO:0016070,GO:0016071,GO:0016740,GO:0016772,GO:0016779,GO:0019222,GO:0019439,GO:0034641,GO:0034655,GO:0043170,GO:0044237,GO:0044238,GO:0044248,GO:0044260,GO:0044265,GO:0044270,GO:0046483,GO:0046700,GO:0048519,GO:0050789,GO:0060255,GO:0065007,GO:0071704,GO:0090304,GO:0097159,GO:1901360,GO:1901361,GO:1901363,GO:1901575 2.7.7.8 1.509e-235 757.0
DYD2_k127_880195_1 An RNase that has 5'-3' exonuclease and possibly endonuclease activity. Involved in maturation of rRNA and in some organisms also mRNA maturation and or decay K12574 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001289 592.0
DYD2_k127_880195_10 Luciferase-like monooxygenase K04091 - 1.14.14.5 0.000000000000000000000000000000000000000000000000000000000000000000000002674 258.0
DYD2_k127_880195_11 Methylenetetrahydrofolate reductase K00297 - 1.5.1.20 0.0000000000000000000000000000000000000000000000000000000000000000000007358 248.0
DYD2_k127_880195_12 Uracil DNA glycosylase superfamily K21929 - 3.2.2.27 0.00000000000000000000000000000000000000000000000000000000000000004395 229.0
DYD2_k127_880195_13 TIGRFAM riboflavin biosynthesis protein RibF K11753 - 2.7.1.26,2.7.7.2 0.0000000000000000000000000000000000000000000000000000000000009754 221.0
DYD2_k127_880195_14 Responsible for synthesis of pseudouridine from uracil- 55 in the psi GC loop of transfer RNAs K03177 - 5.4.99.25 0.00000000000000000000000000000000000000000000000000000000001782 217.0
DYD2_k127_880195_15 Putative diguanylate phosphodiesterase - - - 0.000000000000000000000000000000000000000000000000000000000186 224.0
DYD2_k127_880195_16 Catalyzes the transfer of a dimethylallyl group onto the adenine at position 37 in tRNAs that read codons beginning with uridine, leading to the formation of N6-(dimethylallyl)adenosine (i(6)A) K00791 - 2.5.1.75 0.0000000000000000000000000000000000000000000000000000000004964 218.0
DYD2_k127_880195_17 Belongs to the UPF0234 family K09767 - - 0.00000000000000000000000000000000000000000000000000000002811 201.0
DYD2_k127_880195_18 GGDEF domain - - - 0.0000000000000000000000000000000000000000000000000007641 204.0
DYD2_k127_880195_19 Domain of unknown function (DU1801) - - - 0.0000000000000000000000000000000000000000000002249 178.0
DYD2_k127_880195_2 Endoribonuclease that initiates mRNA decay K18682 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005746 565.0
DYD2_k127_880195_20 Forms an intersubunit bridge (bridge B4) with the 23S rRNA of the 50S subunit in the ribosome K02956 GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0005886,GO:0015935,GO:0016020,GO:0022626,GO:0022627,GO:0032991,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:0071944,GO:1990904 - 0.00000000000000000000000000000005799 131.0
DYD2_k127_880195_21 Competence-damaged protein K03743 - 3.5.1.42 0.0000000000000000000000000000001246 132.0
DYD2_k127_880195_22 Modulates RecA activity K03565 - - 0.00000000000000000000008317 106.0
DYD2_k127_880195_23 Rhodanese Homology Domain - - - 0.00000000000000000001331 98.0
DYD2_k127_880195_24 Cupin 2, conserved barrel domain protein - - - 0.000000000000000007622 91.0
DYD2_k127_880195_25 SMART helix-turn-helix domain protein - - - 0.00000000000000006996 94.0
DYD2_k127_880195_3 Belongs to the pirin family K06911 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002683 505.0
DYD2_k127_880195_4 Can catalyze the hydrolysis of ATP in the presence of single-stranded DNA, the ATP-dependent uptake of single-stranded DNA by duplex DNA, and the ATP-dependent hybridization of homologous single-stranded DNAs. It interacts with LexA causing its activation and leading to its autocatalytic cleavage K03553 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005119 483.0
DYD2_k127_880195_5 PFAM cell divisionFtsK SpoIIIE K03466 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000471 482.0
DYD2_k127_880195_6 Belongs to the GcvT family K00605 - 2.1.2.10 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001369 384.0
DYD2_k127_880195_7 GTPase that associates with the 50S ribosomal subunit and may have a role during protein synthesis or ribosome biogenesis K03665 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007655 374.0
DYD2_k127_880195_8 Mur ligase family, catalytic domain K01924 - 6.3.2.8 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000001065 305.0
DYD2_k127_880195_9 TIGRFAM metallophosphoesterase, MG_246 BB_0505 family K09769 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000001352 302.0
DYD2_k127_880689_0 NADH-ubiquinone oxidoreductase-F iron-sulfur binding region K00335,K18331 - 1.12.1.3,1.6.5.3 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005419 369.0
DYD2_k127_880689_1 NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be a menaquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient K00333 GO:0003674,GO:0003824,GO:0003954,GO:0008137,GO:0008150,GO:0008152,GO:0016491,GO:0016651,GO:0016655,GO:0050136,GO:0055114 1.6.5.3 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008053 350.0
DYD2_k127_880689_2 NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient. This subunit may bind ubiquinone K00337 GO:0003674,GO:0003824,GO:0003954,GO:0008137,GO:0008150,GO:0008152,GO:0016491,GO:0016651,GO:0016655,GO:0050136,GO:0055114 1.6.5.3 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000007553 292.0
DYD2_k127_880689_3 NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be a menaquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient K00331 - 1.6.5.3 0.00000000000000000000000000000000000000000000000000001976 198.0
DYD2_k127_880689_4 NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient K00332 - 1.6.5.3 0.0000000000000000000001949 111.0
DYD2_k127_880689_5 2 iron, 2 sulfur cluster binding K00334,K18330 - 1.12.1.3,1.6.5.3 0.0000000000000000000007113 106.0
DYD2_k127_880689_6 NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be a menaquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient K00330 GO:0003674,GO:0003824,GO:0003954,GO:0005575,GO:0008137,GO:0008150,GO:0008152,GO:0016020,GO:0016491,GO:0016651,GO:0016655,GO:0030964,GO:0032991,GO:0044425,GO:0050136,GO:0055114,GO:0098796,GO:1902494 1.6.5.3 0.0000000000000000000009449 98.0
DYD2_k127_880689_7 GTP binding - - - 0.00000000000000005261 92.0
DYD2_k127_880689_8 NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient K00338 GO:0003674,GO:0005488,GO:0005575,GO:0005623,GO:0005886,GO:0006091,GO:0008150,GO:0008152,GO:0009060,GO:0009987,GO:0015980,GO:0016020,GO:0030964,GO:0032991,GO:0044237,GO:0044425,GO:0044459,GO:0044464,GO:0045271,GO:0045272,GO:0045333,GO:0048037,GO:0051536,GO:0051539,GO:0051540,GO:0055114,GO:0070469,GO:0070470,GO:0071944,GO:0098796,GO:0098797,GO:0098803,GO:1902494,GO:1990204 1.6.5.3 0.000000000000001969 86.0
DYD2_k127_963338_0 TIGRFAM acetyl coenzyme A synthetase (ADP forming), alpha domain K09181 - - 0.0 1156.0
DYD2_k127_963338_1 malic protein domain protein K00027 - 1.1.1.38 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001792 586.0
DYD2_k127_963338_10 Belongs to the pseudouridine synthase RsuA family K06178,K06182 - 5.4.99.21,5.4.99.22 0.00000000000000000000000000000000000000000000000000000008597 215.0
DYD2_k127_963338_11 Belongs to the cytidylate kinase family. Type 1 subfamily K00945 - 2.7.4.25 0.00000000000000000000000000000000000000000002084 181.0
DYD2_k127_963338_12 Belongs to the 1-acyl-sn-glycerol-3-phosphate acyltransferase family K00655 - 2.3.1.51 0.00000000000000000000000000000000000002414 153.0
DYD2_k127_963338_13 zinc metalloprotease - - - 0.0000000000000000000000000000000000007985 146.0
DYD2_k127_963338_14 Participates in chromosomal partition during cell division. May act via the formation of a condensin-like complex containing Smc and ScpA that pull DNA away from mid-cell into both cell halves K06024 - - 0.000000000000000000000000000000000861 146.0
DYD2_k127_963338_15 PFAM membrane-flanked domain - - - 0.000000000000000000000000001641 123.0
DYD2_k127_963338_16 Participates in chromosomal partition during cell division. May act via the formation of a condensin-like complex containing Smc and ScpB that pull DNA away from mid-cell into both cell halves K05896 - - 0.00000000000000000002869 100.0
DYD2_k127_963338_17 PFAM HD domain - - - 0.0000000000000001814 85.0
DYD2_k127_963338_18 Involved in the regulation of the intracellular balance of NAD and NADP, and is a key enzyme in the biosynthesis of NADP. Catalyzes specifically the phosphorylation on 2'-hydroxyl of the adenosine moiety of NAD to yield NADP K00858 - 2.7.1.23 0.0008175 45.0
DYD2_k127_963338_2 GTPase that plays an essential role in the late steps of ribosome biogenesis K00058,K03977 GO:0005575,GO:0005618,GO:0005623,GO:0005886,GO:0008150,GO:0016020,GO:0030312,GO:0040007,GO:0044464,GO:0071944 1.1.1.399,1.1.1.95 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002105 486.0
DYD2_k127_963338_3 Anion-transporting ATPase K01551 - 3.6.3.16 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003849 402.0
DYD2_k127_963338_4 May be involved in recombinational repair of damaged DNA K03631 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007321 351.0
DYD2_k127_963338_5 NAD-dependent glycerol-3-phosphate dehydrogenase domain protein K00057 GO:0003674,GO:0003824,GO:0004367,GO:0006072,GO:0006793,GO:0006796,GO:0008150,GO:0008152,GO:0009058,GO:0009987,GO:0016491,GO:0016614,GO:0016616,GO:0019637,GO:0044237,GO:0046167,GO:0052646,GO:0055114,GO:0071704,GO:0090407,GO:1901135,GO:1901137,GO:1901576 1.1.1.94 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000009685 303.0
DYD2_k127_963338_6 Phage integrase, N-terminal SAM-like domain K04763 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000777 260.0
DYD2_k127_963338_7 The purine nucleoside phosphorylases catalyze the phosphorolytic breakdown of the N-glycosidic bond in the beta- (deoxy)ribonucleoside molecules, with the formation of the corresponding free purine bases and pentose-1-phosphate K00772,K03783 - 2.4.2.1,2.4.2.28 0.0000000000000000000000000000000000000000000000000000000000000000000009569 250.0
DYD2_k127_963338_8 Catalyzes the conversion of 1-hydroxy-2-methyl-2-(E)- butenyl 4-diphosphate (HMBPP) into a mixture of isopentenyl diphosphate (IPP) and dimethylallyl diphosphate (DMAPP). Acts in the terminal step of the DOXP MEP pathway for isoprenoid precursor biosynthesis K03527 - 1.17.7.4 0.00000000000000000000000000000000000000000000000000000000000004056 224.0
DYD2_k127_963338_9 COG0471 Di- and tricarboxylate transporters K14445 - - 0.0000000000000000000000000000000000000000000000000000000006696 224.0