Overview

ID MAG00931
Name DYD2_bin.56
Sample SMP0026
Taxonomy
Kingdom Bacteria
Phylum Pseudomonadota
Class Gammaproteobacteria
Order Burkholderiales
Family Burkholderiaceae
Genus Limnobacter
Species
Assembly information
Completeness (%) 73.27
Contamination (%) 2.36
GC content (%) 53.0
N50 (bp) 6,689
Genome size (bp) 2,661,785

Location

Module

Module ID Module name Total genes Total steps Contain genes Contain steps Percentage of genes Percentage of steps

Genes2651

Gene name Description KEGG GOs EC E-value Score Sequence
DYD2_k127_1041854_0 Master enzyme that delivers sulfur to a number of partners involved in Fe-S cluster assembly, tRNA modification or cofactor biosynthesis. Catalyzes the removal of elemental sulfur atoms from cysteine to produce alanine. Functions as a sulfur delivery protein for Fe-S cluster synthesis onto IscU, an Fe-S scaffold assembly protein, as well as other S acceptor proteins K04487 - 2.8.1.7 1.046e-214 671.0
DYD2_k127_1041854_1 damaged site, the DNA wraps around one UvrB monomer. DNA wrap is dependent on ATP binding by UvrB and probably causes local melting of the DNA helix, facilitating insertion of UvrB beta-hairpin between the DNA strands. Then UvrB probes one DNA strand for the presence of a lesion. If a lesion is found the UvrA subunits dissociate and the UvrB-DNA preincision complex is formed. This complex is subsequently bound by UvrC and the second UvrB is released. If no lesion is found, the DNA wraps around the other UvrB subunit that will check the other stand for damage K03702 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000184 433.0
DYD2_k127_1041854_2 Belongs to the low molecular weight phosphotyrosine protein phosphatase family K01104 GO:0000271,GO:0003674,GO:0003824,GO:0004721,GO:0004725,GO:0005975,GO:0005976,GO:0006464,GO:0006470,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009242,GO:0009987,GO:0016051,GO:0016311,GO:0016787,GO:0016788,GO:0016791,GO:0019538,GO:0033692,GO:0034637,GO:0034645,GO:0035335,GO:0036211,GO:0042578,GO:0043170,GO:0043412,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044262,GO:0044264,GO:0044267,GO:0046377,GO:0071704,GO:0140096,GO:1901135,GO:1901137,GO:1901564,GO:1901576 3.1.3.48 0.000000000000000000000000000000000000000000000000000000000000000000004716 237.0
DYD2_k127_1041854_3 Transcriptional regulator K13643 - - 0.00000000000000000000000000000000000000000000000000000000000006289 216.0
DYD2_k127_1041854_4 A scaffold on which IscS assembles Fe-S clusters. It is likely that Fe-S cluster coordination is flexible as the role of this complex is to build and then hand off Fe-S clusters K04488 - - 0.00000000000000000000000000000000000000000000001478 171.0
DYD2_k127_1043580_0 Represses a number of genes involved in the response to DNA damage (SOS response), including recA and lexA. Binds to the 16 bp palindromic sequence 5'-CTGTATATATATACAG-3'. In the presence of single-stranded DNA, RecA interacts with LexA causing an autocatalytic cleavage which disrupts the DNA-binding part of LexA, leading to derepression of the SOS regulon and eventually DNA repair K01356 GO:0000976,GO:0001067,GO:0001130,GO:0001217,GO:0003674,GO:0003676,GO:0003677,GO:0003690,GO:0003700,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006139,GO:0006282,GO:0006351,GO:0006355,GO:0006725,GO:0006807,GO:0006950,GO:0006974,GO:0007154,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009432,GO:0009605,GO:0009889,GO:0009890,GO:0009892,GO:0009987,GO:0009991,GO:0010467,GO:0010468,GO:0010556,GO:0010558,GO:0010605,GO:0010629,GO:0016070,GO:0018130,GO:0019219,GO:0019222,GO:0019438,GO:0031323,GO:0031324,GO:0031326,GO:0031327,GO:0031668,GO:0032774,GO:0032991,GO:0032993,GO:0033554,GO:0034641,GO:0034645,GO:0034654,GO:0042802,GO:0043170,GO:0043565,GO:0044212,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044271,GO:0044424,GO:0044444,GO:0044464,GO:0045892,GO:0045934,GO:0046483,GO:0048519,GO:0048523,GO:0048583,GO:0050789,GO:0050794,GO:0050896,GO:0051052,GO:0051171,GO:0051172,GO:0051252,GO:0051253,GO:0051716,GO:0060255,GO:0065007,GO:0071496,GO:0071704,GO:0080090,GO:0080134,GO:0080135,GO:0090304,GO:0097159,GO:0097659,GO:0140110,GO:1901360,GO:1901362,GO:1901363,GO:1901576,GO:1902679,GO:1903506,GO:1903507,GO:1990837,GO:2000112,GO:2000113,GO:2001020,GO:2001141 3.4.21.88 0.00000000000000000000000000000000000000000000000000000000000000000000001775 252.0
DYD2_k127_1043580_1 Component of the SOS system and an inhibitor of cell division. Accumulation of SulA causes rapid cessation of cell division and the appearance of long, non-septate filaments. In the presence of GTP, binds a polymerization-competent form of FtsZ in a 1 1 ratio, thus inhibiting FtsZ polymerization and therefore preventing it from participating in the assembly of the Z ring. This mechanism prevents the premature segregation of damaged DNA to daughter cells during cell division K13053,K14160 - - 0.00000000000000000000000000000000000000000000000000004626 194.0
DYD2_k127_1043580_2 Belongs to the UPF0246 family K09861 - - 0.000000000000000000000000000000000000000008306 156.0
DYD2_k127_1051699_0 Catalyzes the base-exchange of a guanine (G) residue with the queuine precursor 7-aminomethyl-7-deazaguanine (PreQ1) at position 34 (anticodon wobble position) in tRNAs with GU(N) anticodons (tRNA-Asp, -Asn, -His and -Tyr). Catalysis occurs through a double-displacement mechanism. The nucleophile active site attacks the C1' of nucleotide 34 to detach the guanine base from the RNA, forming a covalent enzyme-RNA intermediate. The proton acceptor active site deprotonates the incoming PreQ1, allowing a nucleophilic attack on the C1' of the ribose to form the product. After dissociation, two additional enzymatic reactions on the tRNA convert PreQ1 to queuine (Q), resulting in the hypermodified nucleoside queuosine (7-(((4,5-cis-dihydroxy-2- cyclopenten-1-yl)amino)methyl)-7-deazaguanosine) K00773 - 2.4.2.29 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005315 356.0
DYD2_k127_1051699_1 PFAM flavin reductase domain protein, FMN-binding - - - 0.000000000000000000000000000000000000000000003767 169.0
DYD2_k127_1051699_2 LysR substrate binding domain K13634,K13635 - - 0.0000000000000000000000006832 105.0
DYD2_k127_1056325_0 Arylsulfatase - - - 1.231e-312 976.0
DYD2_k127_1056325_1 Glutathione S-transferase, C-terminal domain K00799 - 2.5.1.18 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002622 324.0
DYD2_k127_1056325_2 Protein of unknown function (DUF533) - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000003518 278.0
DYD2_k127_1056325_3 Sulfatase-modifying factor enzyme 1 - GO:0003674,GO:0003824,GO:0006464,GO:0006807,GO:0008150,GO:0008152,GO:0009987,GO:0016491,GO:0016667,GO:0016670,GO:0018158,GO:0019538,GO:0036211,GO:0043170,GO:0043412,GO:0043687,GO:0044237,GO:0044238,GO:0044260,GO:0044267,GO:0055114,GO:0071704,GO:0120147,GO:1901564 - 0.00000000000000000000000000000000000000000000000000000000000000000000000000001172 268.0
DYD2_k127_1056325_4 Bacterial regulatory proteins, tetR family - - - 0.00000000000000000000000000000000000000000000000000000000005328 211.0
DYD2_k127_1056325_5 Metal-dependent hydrolase K07044 - - 0.00000000000000000000000000000000000000000000000000000000007766 216.0
DYD2_k127_1056325_6 PaaX-like protein C-terminal domain K02616 - - 0.0000000000000000000000000000000000000000000000003028 185.0
DYD2_k127_1056325_7 transcriptional regulator - - - 0.000000000000000000000000000000000000000000001161 171.0
DYD2_k127_1056325_8 Outer membrane protein transport protein (OMPP1/FadL/TodX) K06076 - - 0.00000000000000000000000006178 123.0
DYD2_k127_1056325_9 Glutathione S-transferase, N-terminal domain - - - 0.000000000000000000000001326 106.0
DYD2_k127_1104949_0 Peptidoglycan polymerase that is essential for cell division K03588 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000441 431.0
DYD2_k127_1104949_1 Cell wall formation. Catalyzes the transfer of a GlcNAc subunit on undecaprenyl-pyrophosphoryl-MurNAc-pentapeptide (lipid intermediate I) to form undecaprenyl-pyrophosphoryl-MurNAc- (pentapeptide)GlcNAc (lipid intermediate II) K02563 - 2.4.1.227 0.0000000000000000000000000000000000000000000000000000000000000006306 224.0
DYD2_k127_1113699_0 NADH:flavin oxidoreductase / NADH oxidase family K00219 - 1.3.1.34 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001466 467.0
DYD2_k127_1113699_1 FtsX-like permease family K02004 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003216 469.0
DYD2_k127_1114867_0 Malonate decarboxylase, alpha subunit, transporter K13929 - 2.3.1.187 1.189e-281 875.0
DYD2_k127_1114867_1 Tripartite ATP-independent periplasmic transporter, DctM component - - - 8.323e-203 640.0
DYD2_k127_1114867_2 TRAP-type C4-dicarboxylate transport system, periplasmic component - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000308 426.0
DYD2_k127_1114867_3 Catalyzes the conversion of maleate to fumarate K01799 - 5.2.1.1 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007792 398.0
DYD2_k127_1114867_4 haloacid dehalogenase K01560 - 3.8.1.2 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007148 302.0
DYD2_k127_1114867_5 PFAM Bacterial regulatory proteins, gntR family, FCD domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000238 274.0
DYD2_k127_1114867_6 COG1853 Conserved protein domain typically associated with flavoprotein oxygenases, DIM6 NTAB family - - - 0.00000000000000000000000000000000000000000000000000000000000000000003195 237.0
DYD2_k127_1114867_7 TRAP-type C4-dicarboxylate transport system, small permease component - - - 0.000000000000000000000000000000000000000000000002214 180.0
DYD2_k127_1114867_8 Malonate decarboxylase delta subunit (MdcD) K13931 - - 0.0000000000000000000000002512 111.0
DYD2_k127_1114867_9 Belongs to the dicarboxylate amino acid cation symporter (DAACS) (TC 2.A.23) family K11102,K11103 - - 0.00007774 45.0
DYD2_k127_1118257_0 Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain K07303 - 1.3.99.16 7.879e-280 868.0
DYD2_k127_1118257_1 XdhC and CoxI family K07402 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004278 429.0
DYD2_k127_1118257_2 MobA-like NTP transferase domain K07141 - 2.7.7.76 0.00000000000000000000000000000000000000000000000003287 185.0
DYD2_k127_1127067_0 Protein of unknown function (DUF4043) - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001822 504.0
DYD2_k127_1127067_1 - - - - 0.000000000000000000000000000000000005951 145.0
DYD2_k127_1127067_2 - - - - 0.0000000000000000000000000000000938 128.0
DYD2_k127_1127067_4 - - - - 0.00000000008278 70.0
DYD2_k127_1127067_6 Belongs to the class-II aminoacyl-tRNA synthetase family. Phe-tRNA synthetase alpha subunit type 1 subfamily K01889 - 6.1.1.20 0.0004455 46.0
DYD2_k127_1138707_0 LUD domain K18929 - - 1.154e-216 680.0
DYD2_k127_1138707_1 Catalyzes the conversion of dihydroorotate to orotate with quinone as electron acceptor K00254 - 1.3.5.2 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004559 438.0
DYD2_k127_1138707_2 May conjugate Arg from its aminoacyl-tRNA to the N- termini of proteins containing an N-terminal aspartate or glutamate K21420 - 2.3.2.29 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001357 350.0
DYD2_k127_1138707_3 Cysteine-rich domain K11473,K18928 - - 0.000000000000000000000000000000000000000000000000007846 183.0
DYD2_k127_1138707_4 Functions in the N-end rule pathway of protein degradation where it conjugates Leu, Phe and, less efficiently, Met from aminoacyl-tRNAs to the N-termini of proteins containing an N-terminal arginine or lysine K00684 - 2.3.2.6 0.00000000000000000000000000000000000000000000000006193 182.0
DYD2_k127_1141935_0 Belongs to the dGTPase family. Type 2 subfamily K01129 - 3.1.5.1 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001551 528.0
DYD2_k127_1141935_1 Catalyzes the conversion of 3-deoxy-D-arabino- heptulosonate 7-phosphate (DAHP) to dehydroquinate (DHQ) K01735,K13829 - 2.7.1.71,4.2.3.4 0.00000000000000000000000000000000000000000000001921 173.0
DYD2_k127_1141935_2 transposase K07491 - - 0.000000000000000000000000000000000001657 147.0
DYD2_k127_1141935_3 glutamate synthase K00265,K00284 - 1.4.1.13,1.4.1.14,1.4.7.1 0.00000004085 55.0
DYD2_k127_1162262_0 Belongs to the class-I aminoacyl-tRNA synthetase family K01883 - 6.1.1.16 8.811e-209 658.0
DYD2_k127_1162262_1 L,D-transpeptidase catalytic domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001505 327.0
DYD2_k127_1162262_2 Domain of unknown function (DUF4440) - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000001222 269.0
DYD2_k127_1162262_3 endonuclease III K01247 - 3.2.2.21 0.0000000000000000000000000000000000000000000000000000000007028 208.0
DYD2_k127_1162262_4 Component of the acetyl coenzyme A carboxylase (ACC) complex. First, biotin carboxylase catalyzes the carboxylation of biotin on its carrier protein (BCCP) and then the CO(2) group is transferred by the carboxyltransferase to acetyl-CoA to form malonyl-CoA K01962 - 2.1.3.15,6.4.1.2 0.0000000000000000000000000000000000000000000000000000000007852 203.0
DYD2_k127_1162262_5 Domain of unknown function (DUF4440) - - - 0.0000008115 52.0
DYD2_k127_1168401_0 Required for the export of heme to the periplasm for the biogenesis of c-type cytochromes K02195 - - 0.000000000000000000000000000000000000000000000000000000000000000002949 240.0
DYD2_k127_1168401_1 Heme chaperone required for the biogenesis of c-type cytochromes. Transiently binds heme delivered by CcmC and transfers the heme to apo-cytochromes in a process facilitated by CcmF and CcmH K02197 - - 0.000000000000000000000000000000000005524 140.0
DYD2_k127_1168401_2 Cytochrome c-type biogenesis protein K02200 - - 0.00000000000000000000000000000002353 141.0
DYD2_k127_1168401_3 once thought to export heme, this seems not to be the case, but its exact role is uncertain. Responsible for energy coupling to the transport system K02193 - 3.6.3.41 0.0000000000000000007897 100.0
DYD2_k127_1168401_4 Cytochrome c-type biogenesis protein CcmF K02198 - - 0.00000000000002181 77.0
DYD2_k127_1170329_0 Belongs to the 'phage' integrase family. XerC subfamily K03733 - - 0.0000000000000000000000000000000000000000000000000000000000003736 221.0
DYD2_k127_1170329_1 protein conserved in bacteria - - - 0.0000000000000000000001052 101.0
DYD2_k127_1170329_2 Protein of unknown function, DUF484 K09921 - - 0.0000000000000000008093 90.0
DYD2_k127_1187057_0 4Fe-4S dicluster domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004182 508.0
DYD2_k127_1187057_1 Catalyzes the cyclization of GTP to (8S)-3',8-cyclo-7,8- dihydroguanosine 5'-triphosphate K03639 - 4.1.99.22 0.000000000000000000000000000000000000000000000000000000000000000000000000000000001257 276.0
DYD2_k127_1187057_2 Nitrate reductase delta subunit - - - 0.00000000000000000000000000000000000000000000007315 175.0
DYD2_k127_1187057_3 Protein of unknown function (DUF3305) - - - 0.00000000000000000046 93.0
DYD2_k127_1187057_4 Protein of unknown function (DUF3306) - - - 0.00000000000000273 84.0
DYD2_k127_1187057_5 - - - - 0.000005548 51.0
DYD2_k127_1209275_0 Domain of unknown function (DUF4105) - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002615 347.0
DYD2_k127_1209275_1 Metallo-beta-lactamase superfamily - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000001659 292.0
DYD2_k127_1209275_2 Helix-turn-helix XRE-family like proteins - - - 0.0000000000000000000000000000000000000000000000000002637 195.0
DYD2_k127_1214452_0 May play a key role in the regulation of the intracellular concentration of adenosylhomocysteine K01251 - 3.3.1.1 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004041 533.0
DYD2_k127_1214452_1 Methylenetetrahydrofolate reductase K00297 GO:0000166,GO:0003674,GO:0003824,GO:0004489,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006082,GO:0006575,GO:0006725,GO:0006730,GO:0006732,GO:0006760,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009108,GO:0009396,GO:0009987,GO:0016043,GO:0016053,GO:0016491,GO:0016645,GO:0016646,GO:0018130,GO:0019438,GO:0019752,GO:0022607,GO:0034641,GO:0036094,GO:0042398,GO:0042558,GO:0042559,GO:0043167,GO:0043168,GO:0043436,GO:0043603,GO:0043604,GO:0043933,GO:0044085,GO:0044237,GO:0044249,GO:0044271,GO:0044281,GO:0044283,GO:0044424,GO:0044444,GO:0044464,GO:0046394,GO:0046483,GO:0046653,GO:0046654,GO:0048037,GO:0050660,GO:0050662,GO:0051186,GO:0051188,GO:0051259,GO:0051260,GO:0051262,GO:0051289,GO:0055114,GO:0065003,GO:0071704,GO:0071840,GO:0071949,GO:0097159,GO:1901265,GO:1901360,GO:1901362,GO:1901363,GO:1901564,GO:1901566,GO:1901576 1.5.1.20 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001096 375.0
DYD2_k127_1214452_2 Soluble lytic murein transglycosylase L domain K08309 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001478 394.0
DYD2_k127_1214452_3 RNA-binding S4 domain-containing protein K06442 - 2.1.1.226,2.1.1.227 0.0000000000000000000000000000000000000000000000000000000003205 212.0
DYD2_k127_1214452_4 5-formyltetrahydrofolate cyclo-ligase family - - - 0.000000000000000000000000007601 117.0
DYD2_k127_1247631_0 Belongs to the ParA family K03609 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003615 398.0
DYD2_k127_1247631_1 Domain of unknown function (DUF1732) - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000001898 269.0
DYD2_k127_1247631_2 Essential for recycling GMP and indirectly, cGMP K00942 - 2.7.4.8 0.00000000000000000000000000000000000000000000000000000000000000000001354 239.0
DYD2_k127_1247631_3 Cell division inhibitor that blocks the formation of polar Z ring septums. Rapidly oscillates between the poles of the cell to destabilize FtsZ filaments that have formed before they mature into polar Z rings. Prevents FtsZ polymerization K03610 - - 0.000000000000000000000000000000000000001723 157.0
DYD2_k127_1247631_4 Promotes RNA polymerase assembly. Latches the N- and C- terminal regions of the beta' subunit thereby facilitating its interaction with the beta and alpha subunits K03060 - 2.7.7.6 0.0000000000000000000000000000008623 121.0
DYD2_k127_1271611_0 Catalyzes the conversion of oxaloacetate (OAA) to phosphoenolpyruvate (PEP), the rate-limiting step in the metabolic pathway that produces glucose from lactate and other precursors derived from the citric acid cycle K01596 GO:0000003,GO:0001655,GO:0001822,GO:0001889,GO:0003006,GO:0003674,GO:0003676,GO:0003723,GO:0003729,GO:0003824,GO:0004457,GO:0004611,GO:0004613,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005739,GO:0005759,GO:0005975,GO:0005996,GO:0006006,GO:0006007,GO:0006066,GO:0006071,GO:0006082,GO:0006089,GO:0006090,GO:0006091,GO:0006094,GO:0006109,GO:0006111,GO:0006113,GO:0006139,GO:0006163,GO:0006464,GO:0006629,GO:0006631,GO:0006725,GO:0006732,GO:0006733,GO:0006734,GO:0006735,GO:0006753,GO:0006793,GO:0006796,GO:0006807,GO:0006950,GO:0007028,GO:0007275,GO:0007276,GO:0007281,GO:0007292,GO:0007296,GO:0007610,GO:0008150,GO:0008152,GO:0008906,GO:0009056,GO:0009058,GO:0009062,GO:0009117,GO:0009123,GO:0009126,GO:0009132,GO:0009135,GO:0009141,GO:0009144,GO:0009150,GO:0009161,GO:0009166,GO:0009167,GO:0009179,GO:0009185,GO:0009199,GO:0009205,GO:0009259,GO:0009410,GO:0009605,GO:0009636,GO:0009653,GO:0009719,GO:0009725,GO:0009790,GO:0009792,GO:0009887,GO:0009888,GO:0009889,GO:0009966,GO:0009967,GO:0009987,GO:0009991,GO:0010033,GO:0010243,GO:0010646,GO:0010647,GO:0010675,GO:0010906,GO:0014070,GO:0014074,GO:0015036,GO:0015980,GO:0016042,GO:0016043,GO:0016051,GO:0016052,GO:0016053,GO:0016054,GO:0016301,GO:0016310,GO:0016491,GO:0016614,GO:0016651,GO:0016667,GO:0016668,GO:0016740,GO:0016772,GO:0016773,GO:0016829,GO:0016830,GO:0016831,GO:0016999,GO:0017001,GO:0017144,GO:0018130,GO:0018991,GO:0019098,GO:0019222,GO:0019249,GO:0019318,GO:0019319,GO:0019320,GO:0019362,GO:0019400,GO:0019405,GO:0019438,GO:0019439,GO:0019516,GO:0019538,GO:0019541,GO:0019543,GO:0019563,GO:0019626,GO:0019637,GO:0019659,GO:0019660,GO:0019661,GO:0019666,GO:0019674,GO:0019693,GO:0019751,GO:0019752,GO:0019953,GO:0022412,GO:0022414,GO:0023051,GO:0023056,GO:0030145,GO:0030154,GO:0030703,GO:0030855,GO:0031323,GO:0031667,GO:0031960,GO:0031974,GO:0032501,GO:0032502,GO:0032504,GO:0032787,GO:0032868,GO:0032869,GO:0032870,GO:0033993,GO:0034404,GO:0034641,GO:0034654,GO:0034655,GO:0035690,GO:0036211,GO:0042221,GO:0042493,GO:0042594,GO:0042737,GO:0043167,GO:0043169,GO:0043170,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0043233,GO:0043255,GO:0043412,GO:0043434,GO:0043436,GO:0043687,GO:0043900,GO:0043903,GO:0043949,GO:0043950,GO:0044237,GO:0044238,GO:0044242,GO:0044248,GO:0044249,GO:0044255,GO:0044260,GO:0044262,GO:0044267,GO:0044270,GO:0044271,GO:0044275,GO:0044281,GO:0044282,GO:0044283,GO:0044422,GO:0044424,GO:0044429,GO:0044444,GO:0044446,GO:0044464,GO:0044703,GO:0045471,GO:0046031,GO:0046034,GO:0046164,GO:0046174,GO:0046364,GO:0046365,GO:0046394,GO:0046395,GO:0046434,GO:0046459,GO:0046483,GO:0046496,GO:0046677,GO:0046683,GO:0046700,GO:0046872,GO:0046914,GO:0047134,GO:0048468,GO:0048477,GO:0048513,GO:0048518,GO:0048522,GO:0048545,GO:0048562,GO:0048568,GO:0048583,GO:0048584,GO:0048598,GO:0048609,GO:0048646,GO:0048731,GO:0048732,GO:0048856,GO:0048869,GO:0050789,GO:0050792,GO:0050794,GO:0050896,GO:0051186,GO:0051384,GO:0051591,GO:0051704,GO:0051716,GO:0055086,GO:0055114,GO:0060429,GO:0061005,GO:0061008,GO:0062012,GO:0065007,GO:0070013,GO:0070365,GO:0070887,GO:0071236,GO:0071310,GO:0071361,GO:0071375,GO:0071383,GO:0071384,GO:0071385,GO:0071396,GO:0071407,GO:0071417,GO:0071466,GO:0071495,GO:0071548,GO:0071549,GO:0071704,GO:0071840,GO:0072001,GO:0072071,GO:0072329,GO:0072330,GO:0072521,GO:0072524,GO:0080090,GO:0097159,GO:0097237,GO:0097305,GO:0097306,GO:0097327,GO:1901135,GO:1901292,GO:1901360,GO:1901361,GO:1901362,GO:1901363,GO:1901564,GO:1901575,GO:1901576,GO:1901615,GO:1901616,GO:1901617,GO:1901652,GO:1901653,GO:1901654,GO:1901655,GO:1901698,GO:1901699,GO:1901700,GO:1901701,GO:1902531,GO:1902533 4.1.1.32 0.0 1054.0
DYD2_k127_1271611_1 membrane transporter protein K07090 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000001379 262.0
DYD2_k127_1271611_2 MOSC domain - - - 0.0000000000000000000000000000000000000001727 156.0
DYD2_k127_1280641_0 Bifunctional enzyme with both catalase and broad- spectrum peroxidase activity K03782 GO:0000302,GO:0003674,GO:0003824,GO:0004096,GO:0004601,GO:0005488,GO:0005575,GO:0005576,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006950,GO:0006979,GO:0008150,GO:0008152,GO:0009056,GO:0009636,GO:0009987,GO:0010035,GO:0016209,GO:0016491,GO:0016684,GO:0016999,GO:0017001,GO:0017144,GO:0020037,GO:0033554,GO:0034599,GO:0034614,GO:0035690,GO:0042221,GO:0042493,GO:0042542,GO:0042737,GO:0042743,GO:0042744,GO:0044237,GO:0044248,GO:0044424,GO:0044444,GO:0044464,GO:0046677,GO:0046906,GO:0048037,GO:0050896,GO:0051186,GO:0051187,GO:0051716,GO:0055114,GO:0070301,GO:0070887,GO:0071236,GO:0072593,GO:0097159,GO:0097237,GO:0098754,GO:0098869,GO:1901363,GO:1901700,GO:1901701,GO:1990748 1.11.1.21 2.271e-210 660.0
DYD2_k127_1280641_1 Enoyl-CoA hydratase/isomerase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002393 394.0
DYD2_k127_1280641_2 Uncharacterized protein family UPF0016 - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000004194 293.0
DYD2_k127_1280641_3 Carboxymuconolactone decarboxylase family - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000003938 252.0
DYD2_k127_1280641_4 Glycosyl transferase family 2 - - - 0.00000000000000000000000000000000000000000000000000000000000000001006 234.0
DYD2_k127_1299280_0 Belongs to the enoyl-CoA hydratase isomerase family K01782 - 1.1.1.35,4.2.1.17,5.1.2.3 6.119e-254 794.0
DYD2_k127_1299280_1 converts acyl-CoA and FAD to FADH2 and delta2-enoyl-CoA - - - 0.0000000000000000000000000000000000000000000000000000000000000000000009791 241.0
DYD2_k127_131621_0 Chlorite dismutase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000004609 247.0
DYD2_k127_131621_1 - - - - 0.000000000000000000000000000000000000000000000007011 179.0
DYD2_k127_131621_2 - - - - 0.00000000000000000000000000000000000000005361 154.0
DYD2_k127_131621_3 Uracil DNA glycosylase superfamily - - - 0.00000000000003301 73.0
DYD2_k127_1322198_0 Chaperone involved in the maturation of iron-sulfur cluster-containing proteins. Has a low intrinsic ATPase activity which is markedly stimulated by HscB K04044 GO:0000166,GO:0000988,GO:0000989,GO:0003674,GO:0003824,GO:0005488,GO:0005515,GO:0005524,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006457,GO:0006458,GO:0006950,GO:0006986,GO:0008144,GO:0008150,GO:0008270,GO:0009266,GO:0009408,GO:0009628,GO:0009889,GO:0009987,GO:0010033,GO:0010556,GO:0016043,GO:0016462,GO:0016787,GO:0016817,GO:0016818,GO:0016887,GO:0016989,GO:0017076,GO:0017111,GO:0019219,GO:0019222,GO:0022607,GO:0030554,GO:0031323,GO:0031326,GO:0032553,GO:0032555,GO:0032559,GO:0032991,GO:0033554,GO:0034620,GO:0035639,GO:0035966,GO:0035967,GO:0036094,GO:0042221,GO:0043167,GO:0043168,GO:0043169,GO:0043531,GO:0043933,GO:0044085,GO:0044183,GO:0044424,GO:0044444,GO:0044464,GO:0046872,GO:0046914,GO:0050789,GO:0050794,GO:0050896,GO:0051082,GO:0051084,GO:0051085,GO:0051087,GO:0051171,GO:0051252,GO:0051716,GO:0060255,GO:0061077,GO:0065003,GO:0065007,GO:0070887,GO:0071310,GO:0071840,GO:0080090,GO:0097159,GO:0097367,GO:0140110,GO:1901265,GO:1901363,GO:1903506,GO:2001141 - 4.755e-232 733.0
DYD2_k127_1322198_1 Belongs to the HesB IscA family K13628 - - 0.00000000000000000000000000000000000000000000000000005474 188.0
DYD2_k127_1322198_2 Co-chaperone involved in the maturation of iron-sulfur cluster-containing proteins. Seems to help targeting proteins to be folded toward HscA K04082 - - 0.00000000000000000000000000000000000001288 150.0
DYD2_k127_1357453_0 Catalyzes the phosphorylation of pyruvate to phosphoenolpyruvate K01007 - 2.7.9.2 0.0 1272.0
DYD2_k127_1357453_1 Membrane protease subunits, stomatin prohibitin homologs - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007993 444.0
DYD2_k127_1357453_2 NfeD-like C-terminal, partner-binding - - - 0.0000000000000000002499 93.0
DYD2_k127_1385722_0 Acyl-CoA dehydrogenase, C-terminal domain K00253 - 1.3.8.4 1.661e-212 663.0
DYD2_k127_1385722_1 thiolester hydrolase activity - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004673 448.0
DYD2_k127_1385722_2 Bifunctional enzyme which can phosphorylate or dephosphorylate isocitrate dehydrogenase (IDH) on a specific serine residue. This is a regulatory mechanism which enables bacteria to bypass the Krebs cycle via the glyoxylate shunt in response to the source of carbon. When bacteria are grown on glucose, IDH is fully active and unphosphorylated, but when grown on acetate or ethanol, the activity of IDH declines drastically concomitant with its phosphorylation K00906 - 2.7.11.5 0.00000000000000000000000000004592 123.0
DYD2_k127_1400856_0 Belongs to the folylpolyglutamate synthase family K11754 - 6.3.2.12,6.3.2.17 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000016 541.0
DYD2_k127_1400856_1 Component of the acetyl coenzyme A carboxylase (ACC) complex. Biotin carboxylase (BC) catalyzes the carboxylation of biotin on its carrier protein (BCCP) and then the CO(2) group is transferred by the transcarboxylase to acetyl-CoA to form malonyl- CoA K01963 - 2.1.3.15,6.4.1.2 0.000000000000000000000000000000000000000000000008036 172.0
DYD2_k127_1400856_2 Sporulation related domain K03749 - - 0.00001466 55.0
DYD2_k127_1409958_0 Mur ligase, middle domain protein K03802 - 6.3.2.29,6.3.2.30 3.856e-295 927.0
DYD2_k127_1409958_1 Transcriptional regulator, NifA subfamily, Fis Family K12266 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002433 502.0
DYD2_k127_1409958_10 CsbD-like - - - 0.000000000000000000000000006167 110.0
DYD2_k127_1409958_11 His Kinase A (phosphoacceptor) domain - - - 0.00000000000000000000007969 106.0
DYD2_k127_1409958_12 UPF0391 membrane protein - - - 0.0000000000000001119 80.0
DYD2_k127_1409958_13 Periplasmic or secreted lipoprotein K04065 - - 0.00000000000001871 77.0
DYD2_k127_1409958_2 His Kinase A (phosphoacceptor) domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001382 443.0
DYD2_k127_1409958_3 Is involved in NO detoxification in an aerobic process, termed nitric oxide dioxygenase (NOD) reaction that utilizes O(2) and NAD(P)H to convert NO to nitrate, which protects the bacterium from various noxious nitrogen compounds. Therefore, plays a central role in the inducible response to nitrosative stress K05916 - 1.14.12.17 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004662 414.0
DYD2_k127_1409958_4 response regulator - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002962 315.0
DYD2_k127_1409958_5 COG2197 Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000003647 287.0
DYD2_k127_1409958_6 response regulator - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000001486 289.0
DYD2_k127_1409958_7 Histidine kinase K05962 - 2.7.13.1 0.00000000000000000000000000000000000000000000000000000000000000000000000000000001895 286.0
DYD2_k127_1409958_8 His Kinase A (phosphoacceptor) domain - - - 0.0000000000000000000000000000000000000000000000000000000000000001577 239.0
DYD2_k127_1409958_9 response regulator receiver - - - 0.0000000000000000000000000007829 118.0
DYD2_k127_1416899_0 TonB-dependent siderophore receptor K02014 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001066 538.0
DYD2_k127_1416899_1 Imelysin K07231 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000239 264.0
DYD2_k127_141734_0 TRAP transporter, 4TM 12TM fusion protein - - - 0.0 1010.0
DYD2_k127_141734_1 TRAP transporter solute receptor TAXI family K07080 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001296 481.0
DYD2_k127_141734_2 helix_turn_helix, Lux Regulon - - - 0.00000000000000000000000000000000000000006762 158.0
DYD2_k127_141734_3 MotA/TolQ/ExbB proton channel family - - - 0.0000000000000000000000004361 110.0
DYD2_k127_141734_4 PFAM thiamineS protein - - - 0.0000000000000000000000006156 107.0
DYD2_k127_141734_5 Domain of unknown function (DUF1850) - - - 0.000000000000000000000001056 108.0
DYD2_k127_141734_6 Histidine kinase K07675 - 2.7.13.3 0.00000000000000000000006166 113.0
DYD2_k127_141734_7 Pyridine nucleotide-disulphide oxidoreductase - - - 0.000000000000000005159 84.0
DYD2_k127_141734_8 Metallo-beta-lactamase superfamily - - - 0.000000000000001015 89.0
DYD2_k127_141734_9 - - - - 0.0000003215 55.0
DYD2_k127_1424809_0 Catalyzes the formation of S-adenosylmethionine (AdoMet) from methionine and ATP. The overall synthetic reaction is composed of two sequential steps, AdoMet formation and the subsequent tripolyphosphate hydrolysis which occurs prior to release of AdoMet from the enzyme K00789 - 2.5.1.6 6.868e-213 666.0
DYD2_k127_1424809_1 May play a key role in the regulation of the intracellular concentration of adenosylhomocysteine K01251 GO:0000096,GO:0000097,GO:0000166,GO:0001666,GO:0002376,GO:0002437,GO:0002439,GO:0002544,GO:0003674,GO:0003824,GO:0004013,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005634,GO:0005737,GO:0005829,GO:0006082,GO:0006139,GO:0006152,GO:0006520,GO:0006534,GO:0006555,GO:0006575,GO:0006725,GO:0006732,GO:0006790,GO:0006807,GO:0006950,GO:0006952,GO:0006954,GO:0006955,GO:0007584,GO:0007610,GO:0007622,GO:0007623,GO:0008150,GO:0008152,GO:0008652,GO:0009056,GO:0009058,GO:0009063,GO:0009066,GO:0009069,GO:0009116,GO:0009119,GO:0009164,GO:0009605,GO:0009628,GO:0009987,GO:0009991,GO:0016053,GO:0016054,GO:0016787,GO:0016801,GO:0016802,GO:0017076,GO:0017144,GO:0019439,GO:0019510,GO:0019752,GO:0030554,GO:0031667,GO:0033353,GO:0034641,GO:0034655,GO:0034656,GO:0036094,GO:0036293,GO:0042219,GO:0042221,GO:0042278,GO:0042454,GO:0042745,GO:0042802,GO:0042995,GO:0043005,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0043436,GO:0044237,GO:0044238,GO:0044248,GO:0044249,GO:0044270,GO:0044272,GO:0044273,GO:0044281,GO:0044282,GO:0044283,GO:0044424,GO:0044444,GO:0044464,GO:0046128,GO:0046130,GO:0046394,GO:0046395,GO:0046439,GO:0046483,GO:0046498,GO:0046500,GO:0046700,GO:0048037,GO:0048511,GO:0048512,GO:0050662,GO:0050667,GO:0050896,GO:0051186,GO:0051187,GO:0051287,GO:0055086,GO:0070482,GO:0071268,GO:0071704,GO:0072521,GO:0072523,GO:0097159,GO:0097458,GO:0098604,GO:0120025,GO:1901135,GO:1901136,GO:1901265,GO:1901360,GO:1901361,GO:1901363,GO:1901564,GO:1901565,GO:1901566,GO:1901575,GO:1901576,GO:1901605,GO:1901606,GO:1901607,GO:1901657,GO:1901658 3.3.1.1 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007744 308.0
DYD2_k127_1424809_2 Bacterial lipid A biosynthesis acyltransferase K02517 - 2.3.1.241 0.0000000000000000000000000000000000000000000001326 175.0
DYD2_k127_1424809_3 May play a key role in the regulation of the intracellular concentration of adenosylhomocysteine K01251 - 3.3.1.1 0.00000000000000000000000000000001504 129.0
DYD2_k127_1435202_0 A predicted alpha-helical domain with a conserved ER motif. - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000007373 297.0
DYD2_k127_1435202_1 PFAM transglutaminase domain protein - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000002731 274.0
DYD2_k127_145779_0 Catalyzes the synthesis of acetoacetyl coenzyme A from two molecules of acetyl coenzyme A. It can also act as a thiolase, catalyzing the reverse reaction and generating two-carbon units from the four-carbon product of fatty acid oxidation K00626 - 2.3.1.9 2.703e-205 646.0
DYD2_k127_145779_1 KR domain K00059 - 1.1.1.100 0.00000000000000000000000000000000000000000000000000000000000000000001139 239.0
DYD2_k127_1472916_0 Participates in transcription elongation, termination and antitermination K02601 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003773 314.0
DYD2_k127_1472916_1 Forms part of the ribosomal stalk which helps the ribosome interact with GTP-bound translation factors K02867 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000003601 262.0
DYD2_k127_1472916_2 Binds directly to 23S rRNA. The L1 stalk is quite mobile in the ribosome, and is involved in E site tRNA release K02863 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000002014 258.0
DYD2_k127_1472916_3 Essential subunit of the Sec protein translocation channel SecYEG. Clamps together the 2 halves of SecY. May contact the channel plug during translocation K03073 - - 0.0000000000000000000000000000000002806 135.0
DYD2_k127_1472916_4 translation elongation factor activity K02358 - - 0.00000000000000000000002448 99.0
DYD2_k127_1472916_5 Essential subunit of the Sec protein translocation channel SecYEG. Clamps together the 2 halves of SecY. May contact the channel plug during translocation K03073 - - 0.0001242 44.0
DYD2_k127_1512591_0 Catalyzes the rearrangement of 1-deoxy-D-xylulose 5- phosphate (DXP) to produce the thiazole phosphate moiety of thiamine. Sulfur is provided by the thiocarboxylate moiety of the carrier protein ThiS. In vitro, sulfur can be provided by H(2)S K03149 - 2.8.1.10 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001404 355.0
DYD2_k127_1512591_1 Radical SAM - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001999 349.0
DYD2_k127_1512591_2 ThiS family K03154 - - 0.000000000000000003949 85.0
DYD2_k127_1534635_0 Belongs to the zinc-containing alcohol dehydrogenase family. Class-III subfamily K00121 - 1.1.1.1,1.1.1.284 2.809e-220 687.0
DYD2_k127_1534635_1 Belongs to the sigma-70 factor family. ECF subfamily K03088 - - 0.000000000000000000000006148 103.0
DYD2_k127_1542060_0 2-nitropropane dioxygenase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009559 386.0
DYD2_k127_1542060_1 Bacterial regulatory proteins, tetR family - - - 0.000000000000000000000000000000000000000000000000000000002137 206.0
DYD2_k127_1542060_2 Catalyzes the phosphorolysis of diverse nucleosides, yielding D-ribose 1-phosphate and the respective free bases. Can use uridine, adenosine, guanosine, cytidine, thymidine, inosine and xanthosine as substrates. Also catalyzes the reverse reactions K09913 - 2.4.2.1,2.4.2.2 0.0000000000000000000000000000000000000000000005564 168.0
DYD2_k127_1542060_3 NADH:flavin oxidoreductase / NADH oxidase family - - - 0.000000000000000000000000000122 115.0
DYD2_k127_1542060_4 - - - - 0.000000000000002137 81.0
DYD2_k127_1578406_0 Cobalamin-independent synthase, Catalytic domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000203 569.0
DYD2_k127_1578406_1 Belongs to the thiolase family K00626 - 2.3.1.9 0.0000000000000000000000001038 108.0
DYD2_k127_1579966_0 Domain of Unknown Function (DUF748) - - - 7.601e-231 751.0
DYD2_k127_1579966_1 Histidine Phosphotransfer domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008062 402.0
DYD2_k127_1579966_2 Transcriptional regulator, LysR family - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004367 329.0
DYD2_k127_1579966_3 membrane transporter protein K07090 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000002027 287.0
DYD2_k127_1579966_4 Domain of unknown function (DUF1330) - - - 0.00000000000000000000000000000000000000002857 153.0
DYD2_k127_1579966_5 polyketide cyclase - - - 0.000000000000000003335 85.0
DYD2_k127_1579966_6 Activator of Hsp90 ATPase - - - 0.0001075 47.0
DYD2_k127_1579966_7 alginic acid biosynthetic process K10297 - - 0.0004362 43.0
DYD2_k127_1580543_0 Involved in targeting and insertion of nascent membrane proteins into the cytoplasmic membrane. Binds to the hydrophobic signal sequence of the ribosome-nascent chain (RNC) as it emerges from the ribosomes. The SRP-RNC complex is then targeted to the cytoplasmic membrane where it interacts with the SRP receptor FtsY. Interaction with FtsY leads to the transfer of the RNC complex to the Sec translocase for insertion into the membrane, the hydrolysis of GTP by both Ffh and FtsY, and the dissociation of the SRP-FtsY complex into the individual components K03106 - 3.6.5.4 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001228 315.0
DYD2_k127_1580543_1 Cytochrome c assembly protein - - - 0.0000000000000000000000000000000000000000000000000003183 196.0
DYD2_k127_1580543_2 PFAM N-acetylmuramoyl-L-alanine amidase family 2 K03806 - 3.5.1.28 0.00000007278 55.0
DYD2_k127_1580543_3 - K06950 - - 0.00009764 46.0
DYD2_k127_1595499_0 Involved in the biosynthesis of lipid A, a phosphorylated glycolipid that anchors the lipopolysaccharide to the outer membrane of the cell K00677 - 2.3.1.129 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005994 347.0
DYD2_k127_1595499_1 Catalyzes the N-acylation of UDP-3-O-acylglucosamine using 3-hydroxyacyl-ACP as the acyl donor. Is involved in the biosynthesis of lipid A, a phosphorylated glycolipid that anchors the lipopolysaccharide to the outer membrane of the cell K02536 - 2.3.1.191 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000004587 303.0
DYD2_k127_1595499_2 Involved in unsaturated fatty acids biosynthesis. Catalyzes the dehydration of short chain beta-hydroxyacyl-ACPs and long chain saturated and unsaturated beta-hydroxyacyl-ACPs K02372 - 4.2.1.59 0.00000000000000000000000000000000000000000000000000000000111 204.0
DYD2_k127_1633300_0 Di-haem oxidoreductase, putative peroxidase - - - 3.232e-215 676.0
DYD2_k127_1652277_0 Tripartite ATP-independent periplasmic transporter, DctM component - - - 3.694e-272 861.0
DYD2_k127_1652277_1 Belongs to the 5'-nucleotidase family K11751,K17224 - 3.1.3.5,3.6.1.45 1.531e-270 842.0
DYD2_k127_1652277_10 Sulfur oxidation protein SoxY K17226 - - 0.00000000000000000000000000000000000000000000000006524 182.0
DYD2_k127_1652277_11 Tetratricopeptide repeat - - - 0.00000000000000000000000000000000000000000000001207 188.0
DYD2_k127_1652277_12 oxidation protein K17227 - - 0.0000000000000000000000000000000000000131 147.0
DYD2_k127_1652277_13 Belongs to the sigma-70 factor family. ECF subfamily K03088 - - 0.00000000000000000000000000003309 125.0
DYD2_k127_1652277_14 Belongs to the sigma-70 factor family. ECF subfamily - - - 0.0000000000000000000000006351 112.0
DYD2_k127_1652277_15 COG0526, thiol-disulfide isomerase and thioredoxins - - - 0.00000000000001389 80.0
DYD2_k127_1652277_16 Domain of unknown function (DUF4440) - - - 0.00000000004208 77.0
DYD2_k127_1652277_17 Tetratricopeptide repeat - - - 0.00007463 45.0
DYD2_k127_1652277_2 Mo-co oxidoreductase dimerisation domain K17225 - - 7.951e-220 689.0
DYD2_k127_1652277_3 Topoisomerase IV is essential for chromosome segregation. It relaxes supercoiled DNA. Performs the decatenation events required during the replication of a circular DNA molecule K02622 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006091 503.0
DYD2_k127_1652277_4 COG0715 ABC-type nitrate sulfonate bicarbonate transport systems periplasmic components - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002557 422.0
DYD2_k127_1652277_5 Thiosulfate-oxidizing multienzyme system protein SoxA K17222 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006394 363.0
DYD2_k127_1652277_6 Cytochrome C oxidase, cbb3-type, subunit III K08738 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000727 329.0
DYD2_k127_1652277_7 - - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003145 310.0
DYD2_k127_1652277_8 Cytochrome c K17223 - - 0.000000000000000000000000000000000000000000000000000000000000000000003193 241.0
DYD2_k127_1652277_9 Type III transcriptional regulator - - - 0.00000000000000000000000000000000000000000000000000000000000000000004832 248.0
DYD2_k127_1662531_0 DNA polymerase III K02342 - 2.7.7.7 0.00000000000000000000000000000000000000000000000000000000002006 218.0
DYD2_k127_1662531_1 Ligates lysine onto the cytidine present at position 34 of the AUA codon-specific tRNA(Ile) that contains the anticodon CAU, in an ATP-dependent manner. Cytidine is converted to lysidine, thus changing the amino acid specificity of the tRNA from methionine to isoleucine K04075 GO:0002097,GO:0002101,GO:0002136,GO:0003674,GO:0003824,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006139,GO:0006396,GO:0006399,GO:0006400,GO:0006725,GO:0006807,GO:0008033,GO:0008150,GO:0008152,GO:0009451,GO:0009987,GO:0010467,GO:0016070,GO:0016874,GO:0016879,GO:0032267,GO:0034470,GO:0034641,GO:0034660,GO:0042802,GO:0043170,GO:0043412,GO:0044237,GO:0044238,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0071704,GO:0090304,GO:0140098,GO:0140101,GO:1901360 6.3.4.19 0.000000000000000004231 91.0
DYD2_k127_1662531_2 Nuclease-related domain - - - 0.00000000000000002815 83.0
DYD2_k127_1699808_0 Belongs to the ribulose-phosphate 3-epimerase family K01783 - 5.1.3.1 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001833 381.0
DYD2_k127_1699808_1 Part of a heterotetrameric complex that catalyzes the two-step biosynthesis of anthranilate, an intermediate in the biosynthesis of L-tryptophan. In the first step, the glutamine- binding beta subunit (TrpG) of anthranilate synthase (AS) provides the glutamine amidotransferase activity which generates ammonia as a substrate that, along with chorismate, is used in the second step, catalyzed by the large alpha subunit of AS (TrpE) to produce anthranilate. In the absence of TrpG, TrpE can synthesize anthranilate directly from chorismate and high concentrations of ammonia K01657 - 4.1.3.27 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001879 339.0
DYD2_k127_1699808_2 Phosphoglycolate phosphatase K01091 - 3.1.3.18 0.0000000000000000000000000000000000000000000000000000000000000000000000004682 252.0
DYD2_k127_1699808_3 Membrane-bound lytic murein transglycosylase K08304 - - 0.00000000000000000000000000000000000000000000000000000000000000000000006345 251.0
DYD2_k127_1699808_4 protein affecting Mg2 Co2 transport K06195 - - 0.000000000000000000000000000000000000000000001335 168.0
DYD2_k127_1703040_0 Flagellar basal body rod FlgEFG protein C-terminal K02392 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003759 361.0
DYD2_k127_1703040_1 PFAM flagellar basal body FlaE domain protein K02390 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005038 353.0
DYD2_k127_1703040_2 Flagellar basal-body rod protein FlgF K02391 - - 0.0000000000000000000000000000000000000000000000000000000000000003805 226.0
DYD2_k127_1703040_3 Required for flagellar hook formation. May act as a scaffolding protein K02389 - - 0.00000000000000000000000000000000000000000000001868 178.0
DYD2_k127_1703040_4 Belongs to the flagella basal body rod proteins family K02388 - - 0.000000000000000000000000000000000000000002276 159.0
DYD2_k127_1703040_5 Structural component of flagellum, the bacterial motility apparatus. Part of the rod structure of flagellar basal body K02387 - - 0.0000000000003766 71.0
DYD2_k127_1704705_0 E1 component K00164 - 1.2.4.2 0.0 1536.0
DYD2_k127_1704705_1 Belongs to the citrate synthase family K01647 - 2.3.3.1 5.884e-240 747.0
DYD2_k127_1704705_2 Dehydrogenase K00382 GO:0003674,GO:0003824,GO:0004148,GO:0005575,GO:0005622,GO:0005623,GO:0005634,GO:0005654,GO:0005737,GO:0005739,GO:0005759,GO:0006082,GO:0006084,GO:0006085,GO:0006086,GO:0006090,GO:0006139,GO:0006163,GO:0006164,GO:0006464,GO:0006637,GO:0006725,GO:0006732,GO:0006733,GO:0006753,GO:0006790,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009108,GO:0009117,GO:0009150,GO:0009152,GO:0009165,GO:0009259,GO:0009260,GO:0009987,GO:0016491,GO:0016651,GO:0016667,GO:0016668,GO:0018130,GO:0018335,GO:0019362,GO:0019438,GO:0019538,GO:0019637,GO:0019693,GO:0019752,GO:0031974,GO:0031981,GO:0032787,GO:0032991,GO:0033865,GO:0033866,GO:0033875,GO:0034030,GO:0034032,GO:0034033,GO:0034641,GO:0034654,GO:0035383,GO:0035384,GO:0036211,GO:0043170,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0043233,GO:0043412,GO:0043436,GO:0043543,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044272,GO:0044281,GO:0044422,GO:0044424,GO:0044428,GO:0044429,GO:0044444,GO:0044446,GO:0044464,GO:0045239,GO:0045240,GO:0045252,GO:0045254,GO:0046390,GO:0046483,GO:0046496,GO:0051186,GO:0051188,GO:0055086,GO:0055114,GO:0061732,GO:0070013,GO:0071616,GO:0071704,GO:0072521,GO:0072522,GO:0072524,GO:0090407,GO:0106077,GO:1901135,GO:1901137,GO:1901293,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576,GO:1902494,GO:1990204,GO:1990234 1.8.1.4 7.697e-232 726.0
DYD2_k127_1704705_3 The 2-oxoglutarate dehydrogenase complex catalyzes the overall conversion of 2-oxoglutarate to succinyl-CoA and CO(2) K00658 - 2.3.1.61 2.115e-194 614.0
DYD2_k127_1704705_4 AFG1-like ATPase K06916 - - 0.000000000000000000000000000000000000000000000000000000000000004883 218.0
DYD2_k127_1710975_0 - - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000002535 273.0
DYD2_k127_1710975_1 - - - - 0.000000000000000000000000000000000000000008459 160.0
DYD2_k127_1710975_2 Predicted 3'-5' exonuclease related to the exonuclease domain of PolB K07501 - - 0.000000000000000000000000000000000000003796 154.0
DYD2_k127_1710975_3 Putative antitoxin of bacterial toxin-antitoxin system, YdaS/YdaT - - - 0.0000000001956 64.0
DYD2_k127_1710975_5 Phosphoribosyl-ATP pyrophosphohydrolase - - - 0.00001374 53.0
DYD2_k127_1710975_6 Putative peptidoglycan binding domain - - - 0.00002939 48.0
DYD2_k127_1710975_8 KilA-N domain - - - 0.0007783 46.0
DYD2_k127_1710975_9 - - - - 0.0007876 47.0
DYD2_k127_1722891_0 Catalyzes the conversion of 1-hydroxy-2-methyl-2-(E)- butenyl 4-diphosphate (HMBPP) into a mixture of isopentenyl diphosphate (IPP) and dimethylallyl diphosphate (DMAPP). Acts in the terminal step of the DOXP MEP pathway for isoprenoid precursor biosynthesis K03527 - 1.17.7.4 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002885 465.0
DYD2_k127_1722891_1 Transporter associated domain K03699 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001834 415.0
DYD2_k127_1722891_2 (twin-arginine translocation) pathway signal - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000101 281.0
DYD2_k127_1722891_3 GMC oxidoreductase K03333 - 1.1.3.6 0.00000000000000000000000000000000000000000000000000000000000000000000005256 241.0
DYD2_k127_1722891_4 peptidyl-prolyl cis-trans isomerase K03774 - 5.2.1.8 0.00000000000000000000000000000000000000000004059 165.0
DYD2_k127_1735483_0 amino acids such as valine, to avoid such errors it has two additional distinct tRNA(Ile)-dependent editing activities. One activity is designated as 'pretransfer' editing and involves the hydrolysis of activated Val-AMP. The other activity is designated 'posttransfer' editing and involves deacylation of mischarged Val-tRNA(Ile) K01870 - 6.1.1.5 8.628e-295 918.0
DYD2_k127_1737202_0 DNA polymerase III is a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria. This DNA polymerase also exhibits 3' to 5' exonuclease activity K02343 - 2.7.7.7 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001996 486.0
DYD2_k127_1790528_0 Catalyzes the base-exchange of a guanine (G) residue with the queuine precursor 7-aminomethyl-7-deazaguanine (PreQ1) at position 34 (anticodon wobble position) in tRNAs with GU(N) anticodons (tRNA-Asp, -Asn, -His and -Tyr). Catalysis occurs through a double-displacement mechanism. The nucleophile active site attacks the C1' of nucleotide 34 to detach the guanine base from the RNA, forming a covalent enzyme-RNA intermediate. The proton acceptor active site deprotonates the incoming PreQ1, allowing a nucleophilic attack on the C1' of the ribose to form the product. After dissociation, two additional enzymatic reactions on the tRNA convert PreQ1 to queuine (Q), resulting in the hypermodified nucleoside queuosine (7-(((4,5-cis-dihydroxy-2- cyclopenten-1-yl)amino)methyl)-7-deazaguanosine) K00773 - 2.4.2.29 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008818 586.0
DYD2_k127_1790528_1 COG1853 Conserved protein domain typically associated with flavoprotein oxygenases, DIM6 NTAB family - - - 0.0000000000000000000000000000004637 125.0
DYD2_k127_1790528_2 Two component signalling adaptor domain K03408 - - 0.00000000000000000000003717 107.0
DYD2_k127_1794766_0 Topoisomerase IV is essential for chromosome segregation. It relaxes supercoiled DNA. Performs the decatenation events required during the replication of a circular DNA molecule K02621 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007612 358.0
DYD2_k127_1794766_1 Specifically methylates the ribose of guanosine 2251 in 23S rRNA K03218 - 2.1.1.185 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000004774 299.0
DYD2_k127_180861_0 Cytochrome c oxidase is the component of the respiratory chain that catalyzes the reduction of oxygen to water. Subunits 1- 3 form the functional core of the enzyme complex. CO I is the catalytic subunit of the enzyme. Electrons originating in cytochrome c are transferred via the copper A center of subunit 2 and heme A of subunit 1 to the bimetallic center formed by heme A3 and copper B K02274 - 1.9.3.1 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003848 565.0
DYD2_k127_180861_1 Cytochrome c oxidase subunit III K02276 - 1.9.3.1 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002662 452.0
DYD2_k127_180861_2 protein required for cytochrome oxidase assembly K02259 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000007166 294.0
DYD2_k127_180861_3 Cytochrome C oxidase assembly protein ctag K02258 - - 0.000000000000000000000000000000000000000000000000000000000000002429 222.0
DYD2_k127_180861_4 signal sequence binding - - - 0.0000000000000000000000000000000000000009025 155.0
DYD2_k127_180861_5 Protein of unknown function (DUF2909) - - - 0.00000000000000000002405 91.0
DYD2_k127_180861_6 SURF1-like protein K14998 - - 0.0000000000000000001698 98.0
DYD2_k127_180861_7 Protein of unknown function (DUF2970) - - - 0.0000000000000000009435 88.0
DYD2_k127_1814135_0 Belongs to the prokaryotic molybdopterin-containing oxidoreductase family K00372 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001892 594.0
DYD2_k127_1814135_1 RNA polymerase that catalyzes the synthesis of short RNA molecules used as primers for DNA polymerase during DNA replication K02316 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008492 512.0
DYD2_k127_1814135_2 HI0933 family K07007 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002615 463.0
DYD2_k127_1814135_3 Anthranilate phosphoribosyltransferase K00766 - 2.4.2.18 0.00000000000000000000000000000000000000000000000000000000000000299 229.0
DYD2_k127_1814135_4 Yqey-like protein K09117 - - 0.000000000000000000000000000000000000000000000008054 177.0
DYD2_k127_1814135_5 Belongs to the bacterial ribosomal protein bS21 family K02970 - - 0.0000000000000000000000000000007501 122.0
DYD2_k127_1823474_0 Involved in lipid A export and possibly also in glycerophospholipid export and for biogenesis of the outer membrane. Transmembrane domains (TMD) form a pore in the inner membrane and the ATP-binding domain (NBD) is responsible for energy generation K11085 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003797 550.0
DYD2_k127_1823474_1 Lipopolysaccharide heptosyltransferase III K02849 GO:0000271,GO:0003674,GO:0003824,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005975,GO:0005976,GO:0006629,GO:0008150,GO:0008152,GO:0008610,GO:0008653,GO:0008713,GO:0008920,GO:0009058,GO:0009059,GO:0009103,GO:0009244,GO:0009311,GO:0009312,GO:0009987,GO:0016051,GO:0016740,GO:0016757,GO:0033692,GO:0034637,GO:0034645,GO:0043170,GO:0044237,GO:0044238,GO:0044249,GO:0044255,GO:0044260,GO:0044262,GO:0044264,GO:0044424,GO:0044444,GO:0044464,GO:0046401,GO:0071704,GO:0071967,GO:1901135,GO:1901137,GO:1901576,GO:1903509 - 0.00000000000000000000000000000000000000000000000000000000000000001543 233.0
DYD2_k127_1884574_0 SurA N-terminal domain K03770 - 5.2.1.8 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007559 402.0
DYD2_k127_1884574_1 GDSL-like Lipase/Acylhydrolase K10804 - 3.1.1.5 0.00000000000636 66.0
DYD2_k127_1908677_0 PFAM ATP-binding region, ATPase domain protein - - - 3.196e-200 649.0
DYD2_k127_1908677_1 Transcriptional regulator K13041 GO:0000976,GO:0001067,GO:0001130,GO:0001216,GO:0003674,GO:0003676,GO:0003677,GO:0003690,GO:0003700,GO:0005488,GO:0005575,GO:0006355,GO:0008150,GO:0009889,GO:0009891,GO:0009893,GO:0010468,GO:0010556,GO:0010557,GO:0010604,GO:0010628,GO:0019219,GO:0019222,GO:0031323,GO:0031325,GO:0031326,GO:0031328,GO:0032991,GO:0032993,GO:0043565,GO:0044212,GO:0045893,GO:0045935,GO:0048518,GO:0048522,GO:0050789,GO:0050794,GO:0051171,GO:0051173,GO:0051252,GO:0051254,GO:0060255,GO:0065007,GO:0080090,GO:0097159,GO:0140110,GO:1901363,GO:1902680,GO:1903506,GO:1903508,GO:1990837,GO:2000112,GO:2001141 - 0.00000000000000000000000000000000000000000000000000000000000000000003236 238.0
DYD2_k127_1908677_2 Component of the pyruvate dehydrogenase (PDH) complex, that catalyzes the overall conversion of pyruvate to acetyl-CoA and CO(2) K00163 - 1.2.4.1 0.0000000000000000000000000000000000000000000000000000000005585 204.0
DYD2_k127_1908677_3 Catalyzes the oxidation of 5,10- methylenetetrahydrofolate to 5,10-methenyltetrahydrofolate and then the hydrolysis of 5,10-methenyltetrahydrofolate to 10- formyltetrahydrofolate K01491 - 1.5.1.5,3.5.4.9 0.000000000000000000001211 96.0
DYD2_k127_1922507_0 TonB dependent receptor K02014 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000495 590.0
DYD2_k127_1922507_1 Phosphotransferase enzyme family - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004031 526.0
DYD2_k127_1922507_2 Membrane transport protein K07088 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001869 348.0
DYD2_k127_1922507_3 Short-chain dehydrogenase reductase (SDR) - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001489 332.0
DYD2_k127_1922507_4 Phosphoglycerate mutase family - - - 0.0000000000000000000000000000000000000000000000000000004159 200.0
DYD2_k127_1922507_5 - - - - 0.0000000000007567 74.0
DYD2_k127_1923753_0 Belongs to the 'phage' integrase family - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000001097 278.0
DYD2_k127_1923753_1 Predicted Peptidoglycan domain - - - 0.0000000000000000000000000000000000000000000000000000000000000002952 224.0
DYD2_k127_1923753_2 Protein of unknown function (DUF4031) - - - 0.0000000000000000000000000000000000296 137.0
DYD2_k127_1923753_3 - - - - 0.00000000000000000000000000001714 125.0
DYD2_k127_1923753_5 Domain of unknown function (DUF4224) - - - 0.0004308 46.0
DYD2_k127_194350_0 Plays an important role in the de novo pathway of purine nucleotide biosynthesis. Catalyzes the first committed step in the biosynthesis of AMP from IMP K01939 - 6.3.4.4 1.456e-207 653.0
DYD2_k127_194350_1 HflC and HflK could encode or regulate a protease K04088 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009125 499.0
DYD2_k127_194350_2 GTPase that associates with the 50S ribosomal subunit and may have a role during protein synthesis or ribosome biogenesis K03665 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003469 416.0
DYD2_k127_194350_3 Required for the first step of histidine biosynthesis. May allow the feedback regulation of ATP phosphoribosyltransferase activity by histidine K02502 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001023 414.0
DYD2_k127_194350_4 HflC and HflK could regulate a protease K04087 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001003 367.0
DYD2_k127_194350_5 Protein of unknown function, DUF481 - - - 0.0000000000000000000000000000000000000000000000000000000000000068 230.0
DYD2_k127_194350_6 RNA chaperone that binds small regulatory RNA (sRNAs) and mRNAs to facilitate mRNA translational regulation in response to envelope stress, environmental stress and changes in metabolite concentrations. Also binds with high specificity to tRNAs K03666 - - 0.0000000000000000000000000000000000001877 141.0
DYD2_k127_194350_7 PFAM Phosphoribosyltransferase K07101 - - 0.000000000000000000000000000000000007869 141.0
DYD2_k127_194350_8 Uncharacterized protein conserved in bacteria (DUF2065) K09937 - - 0.000000000001409 69.0
DYD2_k127_19691_0 Catalyzes the NADPH-dependent reduction of N-acetyl-5- glutamyl phosphate to yield N-acetyl-L-glutamate 5-semialdehyde K00145 - 1.2.1.38 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001684 464.0
DYD2_k127_19691_1 This protein is one of the early assembly proteins of the 50S ribosomal subunit, although it is not seen to bind rRNA by itself. It is important during the early stages of 50S assembly K02871 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000001014 269.0
DYD2_k127_19691_2 Auxin Efflux Carrier K07088 - - 0.000000000000000000000000000000000000000000000000000000000000000007592 235.0
DYD2_k127_19691_3 Belongs to the universal ribosomal protein uS9 family K02996 - - 0.00000000000000000000000000000000000000000000000000000000000002334 216.0
DYD2_k127_19691_4 Required for insertion of 4Fe-4S clusters K15724 - - 0.000000000000000000000000000000000000000000000000000000000002037 210.0
DYD2_k127_19691_5 Integral membrane protein CcmA involved in cell shape determination - - - 0.00000000000000000000000000001266 132.0
DYD2_k127_19691_6 - - - - 0.00000000000000000000007358 111.0
DYD2_k127_1978680_0 COG2223 Nitrate nitrite transporter K02575 - - 1.983e-253 788.0
DYD2_k127_1978680_1 Belongs to the monovalent cation proton antiporter 2 (CPA2) transporter (TC 2.A.37) family K03455,K11745,K11747 GO:0003674,GO:0005215,GO:0005488,GO:0005515,GO:0005575,GO:0005623,GO:0005886,GO:0005887,GO:0006810,GO:0006811,GO:0006812,GO:0006813,GO:0006885,GO:0008150,GO:0008324,GO:0009636,GO:0009987,GO:0010033,GO:0015075,GO:0015077,GO:0015079,GO:0015291,GO:0015318,GO:0015503,GO:0015643,GO:0015672,GO:0016020,GO:0016021,GO:0019899,GO:0022804,GO:0022857,GO:0022890,GO:0030001,GO:0031224,GO:0031226,GO:0034220,GO:0042221,GO:0042592,GO:0044425,GO:0044459,GO:0044464,GO:0046873,GO:0048878,GO:0050801,GO:0050896,GO:0051179,GO:0051234,GO:0051595,GO:0055067,GO:0055080,GO:0055085,GO:0065007,GO:0065008,GO:0071804,GO:0071805,GO:0071944,GO:0098655,GO:0098660,GO:0098662,GO:0098771,GO:1901654,GO:1901700 - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005159 566.0
DYD2_k127_1978680_2 Belongs to the thiolase family K00626 - 2.3.1.9 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001673 548.0
DYD2_k127_1978680_3 Saccharopine dehydrogenase NADP binding domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000455 537.0
DYD2_k127_1978680_4 Serine threonine protein - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000154 405.0
DYD2_k127_1978680_5 GGDEF domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003208 374.0
DYD2_k127_1978680_6 PFAM SMP-30 Gluconolaconase - - - 0.0000000000000000000000000000000000000000000000000000000000000000001014 242.0
DYD2_k127_1978680_7 - - - - 0.0000000000000000000000000000000000000339 152.0
DYD2_k127_1978680_8 Transporter, small conductance mechanosensitive ion channel MscS family protein - - - 0.000000000000000000000000000003905 131.0
DYD2_k127_1984848_0 Metallo-beta-lactamase superfamily - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001218 419.0
DYD2_k127_1984848_1 Protein of unknown function (DUF1615) - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003414 395.0
DYD2_k127_1984848_2 isochorismatase hydrolase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000029 249.0
DYD2_k127_1984848_3 Sulfite exporter TauE/SafE K07090 - - 0.0000000000000000000000000000000000000000000000000000000000000000000001868 248.0
DYD2_k127_1984848_4 Domain in histone-like proteins of HNS family K03746 - - 0.000000000001884 72.0
DYD2_k127_1984848_5 - - - - 0.00000000000419 75.0
DYD2_k127_1984848_6 Bacterial collagen, middle region - - - 0.000006487 58.0
DYD2_k127_1984946_0 Catalyzes the conversion of glucosamine-6-phosphate to glucosamine-1-phosphate K03431 - 5.4.2.10 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001742 563.0
DYD2_k127_1984946_1 Catalyzes the condensation of para-aminobenzoate (pABA) with 6-hydroxymethyl-7,8-dihydropterin diphosphate (DHPt-PP) to form 7,8-dihydropteroate (H2Pte), the immediate precursor of folate derivatives K00796 - 2.5.1.15 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000004052 284.0
DYD2_k127_1984946_2 Glycosyltransferase (GlcNAc) - - - 0.0000000000000000000000000000000000000000000000000000000000000000000006921 248.0
DYD2_k127_1984946_3 Involved in cell wall formation. Catalyzes the final step in the synthesis of UDP-N-acetylmuramoyl-pentapeptide, the precursor of murein - - - 0.00000000004804 68.0
DYD2_k127_2004895_0 Catalyzes the reversible transfer of the terminal phosphate of ATP to form a long-chain polyphosphate (polyP) K00937 - 2.7.4.1 5.262e-295 920.0
DYD2_k127_2004895_1 In eubacteria ppGpp (guanosine 3'-diphosphate 5-' diphosphate) is a mediator of the stringent response that coordinates a variety of cellular activities in response to changes in nutritional abundance K00951 - 2.7.6.5 9.757e-247 783.0
DYD2_k127_2004895_2 PFAM Ppx GppA phosphatase K01524 - 3.6.1.11,3.6.1.40 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004814 524.0
DYD2_k127_2004895_3 PFAM alpha beta hydrolase fold - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004286 306.0
DYD2_k127_2017122_0 This protein is involved in the repair of mismatches in DNA. It is required for dam-dependent methyl-directed DNA mismatch repair. May act as a molecular matchmaker , a protein that promotes the formation of a stable complex between two or more DNA-binding proteins in an ATP-dependent manner without itself being part of a final effector complex K03572 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003335 577.0
DYD2_k127_2017122_1 Catalyzes the transfer of a dimethylallyl group onto the adenine at position 37 in tRNAs that read codons beginning with uridine, leading to the formation of N6-(dimethylallyl)adenosine (i(6)A) K00791 - 2.5.1.75 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001955 342.0
DYD2_k127_2017122_2 N-Acetylmuramoyl-L-alanine amidase K01448 - 3.5.1.28 0.00000000000000000000000000000000000000000000001566 172.0
DYD2_k127_2030835_0 Catalyzes the dephosphorylation of undecaprenyl diphosphate (UPP). Confers resistance to bacitracin K06153 - 3.6.1.27 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001838 336.0
DYD2_k127_2030835_1 lipocalin K03098 - - 0.000000000000000000000000000000000000000000000000000193 187.0
DYD2_k127_2030835_2 Tryptophan-rich protein (DUF2389) - - - 0.000000000000000000003174 94.0
DYD2_k127_2054751_0 RmuC family K09760 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007636 458.0
DYD2_k127_2054751_1 Bacterial-like globin K06886 - - 0.0000000000000000000000000000000000000005685 154.0
DYD2_k127_2054751_2 Asparaginase K01424 - 3.5.1.1 0.000000000000000000000000000007892 131.0
DYD2_k127_2054751_3 FtsX-like permease family K02004 - - 0.0000000000000000006866 90.0
DYD2_k127_2066457_0 Belongs to the peptidase S11 family K07258 - 3.4.16.4 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001957 419.0
DYD2_k127_2066457_1 Catalyzes the transfer of a ribosyl phosphate group from 5-phosphoribose 1-diphosphate to orotate, leading to the formation of orotidine monophosphate (OMP) K00762 - 2.4.2.10 0.000000000000000000000000000000000000000000000000000000000000000000000000000000007055 275.0
DYD2_k127_2066457_2 Alpha beta K07018 - - 0.00000000000000000000000000000000000000000000000000000000000000000003336 237.0
DYD2_k127_2066457_3 Ferredoxin - - - 0.00000000000000000000000000000000000000000002395 164.0
DYD2_k127_2066457_4 Biotin protein ligase C terminal domain K03524 - 6.3.4.15 0.00000000000000000000000000000001913 136.0
DYD2_k127_2066457_5 VanZ like family - - - 0.000000000000000000000000000002053 135.0
DYD2_k127_2066457_6 Belongs to the UPF0250 family K09158 - - 0.00000000000000000000000000207 114.0
DYD2_k127_2066457_7 Catalyzes the phosphorylation of pantothenate (Pan), the first step in CoA biosynthesis K03525 - 2.7.1.33 0.000000005217 64.0
DYD2_k127_2067060_0 Cysteine-rich domain K18928 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002352 331.0
DYD2_k127_2067060_1 Domain of unknown function (DUF3390) K18929 - - 0.0000000000000000000000000000000000000000000000004617 177.0
DYD2_k127_2067060_2 LUD domain K18929 - - 0.00000000000000000000002607 102.0
DYD2_k127_2072296_0 Catalyzes the attachment of serine to tRNA(Ser). Is also able to aminoacylate tRNA(Sec) with serine, to form the misacylated tRNA L-seryl-tRNA(Sec), which will be further converted into selenocysteinyl-tRNA(Sec) K01875 - 6.1.1.11 1.245e-205 647.0
DYD2_k127_2072296_1 Amp-dependent synthetase and ligase K01897 - 6.2.1.3 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004803 445.0
DYD2_k127_2072296_2 Major Facilitator Superfamily - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003384 356.0
DYD2_k127_2072296_3 AAA ATPase central domain protein K07478 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000001162 265.0
DYD2_k127_2072296_4 NYN domain - - - 0.0000000000000000000000000000000000000000000000000001104 194.0
DYD2_k127_2072296_5 Endonuclease containing a URI domain K07461 - - 0.00000000000006756 78.0
DYD2_k127_2080055_0 Belongs to the class-IV pyridoxal-phosphate-dependent aminotransferase family K00826 - 2.6.1.42 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002132 320.0
DYD2_k127_2080055_1 Glycosyltransferase family 9 (heptosyltransferase) K02843 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000255 291.0
DYD2_k127_2080055_2 Zinc-finger domain - - - 0.000000000000000000006433 93.0
DYD2_k127_2080055_3 Catalyzes the hydrolysis of 10-formyltetrahydrofolate (formyl-FH4) to formate and tetrahydrofolate (FH4) K01433 - 3.5.1.10 0.00000000000000000002468 94.0
DYD2_k127_2083402_0 A type II topoisomerase that negatively supercoils closed circular double-stranded (ds) DNA in an ATP-dependent manner to modulate DNA topology and maintain chromosomes in an underwound state. Negative supercoiling favors strand separation, and DNA replication, transcription, recombination and repair, all of which involve strand separation. Also able to catalyze the interconversion of other topological isomers of dsDNA rings, including catenanes and knotted rings. Type II topoisomerases break and join 2 DNA strands simultaneously in an ATP-dependent manner K02470 - 5.99.1.3 0.0 1310.0
DYD2_k127_2083402_1 Mycolic acid cyclopropane synthetase K00574 - 2.1.1.79 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005988 383.0
DYD2_k127_2083402_2 Domain of unknown function (DUF4442) - - - 0.000000000000000000000000000007015 124.0
DYD2_k127_2083402_3 helix_turn_helix multiple antibiotic resistance protein - - - 0.00000000000000000000000009743 111.0
DYD2_k127_2083402_4 Confers DNA tethering and processivity to DNA polymerases and other proteins. Acts as a clamp, forming a ring around DNA (a reaction catalyzed by the clamp-loading complex) which diffuses in an ATP-independent manner freely and bidirectionally along dsDNA. Initially characterized for its ability to contact the catalytic subunit of DNA polymerase III (Pol III), a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria K02338 - 2.7.7.7 0.00000006489 53.0
DYD2_k127_2083402_5 Domain of unknown function (DUF4442) - - - 0.0003288 48.0
DYD2_k127_2085526_0 nitrite sulfite reductase, hemoprotein beta-component, ferrodoxin domain protein K00362,K05297 - 1.18.1.1,1.7.1.15 0.0 1281.0
DYD2_k127_2085526_1 Belongs to the prokaryotic molybdopterin-containing oxidoreductase family K00372 - - 0.00000000000000000000000000000000000000000000000000000000000000000001219 237.0
DYD2_k127_2085526_2 TIGRFAM nitrite reductase NAD(P)H , small subunit K00363 - 1.7.1.15 0.00000000000000000000000000000000000000000000009751 171.0
DYD2_k127_2085526_3 X-Pro dipeptidyl-peptidase (S15 family) - - - 0.00000001887 58.0
DYD2_k127_2088220_0 AcrB/AcrD/AcrF family - - - 3.041e-239 759.0
DYD2_k127_210250_0 TIGRFAM general secretory pathway protein E K02454,K02652 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001395 372.0
DYD2_k127_210250_1 Type II secretion system (T2SS), protein F - - - 0.0000000000000000000000000000000000000000000000000005453 200.0
DYD2_k127_210250_2 Bacterial type II and III secretion system protein K02453,K12282 - - 0.00000000000000000000000000000000000000465 157.0
DYD2_k127_210250_3 - - - - 0.000000000000000000000000000000000364 142.0
DYD2_k127_210250_4 peptidyl-prolyl cis-trans isomerase activity K03769,K07533,K20074 - 3.1.3.16,5.2.1.8 0.00000000000000000000000000000133 131.0
DYD2_k127_2122144_0 Critical role in recombination and DNA repair. Helps process Holliday junction intermediates to mature products by catalyzing branch migration. Has a DNA unwinding activity characteristic of a DNA helicase with a 3'- to 5'- polarity. Unwinds branched duplex DNA (Y-DNA) K03655 - 3.6.4.12 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001553 524.0
DYD2_k127_2122144_1 This protein is located at the 30S-50S ribosomal subunit interface and may play a role in the structure and function of the aminoacyl-tRNA binding site K02884 - - 0.0000000000000000000000000000000000000000000000000000000000131 208.0
DYD2_k127_2122144_2 Belongs to the RNA methyltransferase TrmD family K00554 GO:0000287,GO:0001510,GO:0002939,GO:0003674,GO:0003824,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006139,GO:0006396,GO:0006399,GO:0006400,GO:0006725,GO:0006807,GO:0008033,GO:0008150,GO:0008152,GO:0008168,GO:0008173,GO:0008175,GO:0008757,GO:0009019,GO:0009451,GO:0009987,GO:0010467,GO:0016070,GO:0016423,GO:0016740,GO:0016741,GO:0016772,GO:0016779,GO:0030488,GO:0032259,GO:0034470,GO:0034641,GO:0034660,GO:0042802,GO:0043167,GO:0043169,GO:0043170,GO:0043412,GO:0043414,GO:0044237,GO:0044238,GO:0044260,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0046872,GO:0050518,GO:0052906,GO:0070567,GO:0071704,GO:0090304,GO:0140098,GO:0140101,GO:1901360 2.1.1.228 0.0000000000000000000000000000000000000000002615 161.0
DYD2_k127_2146278_0 FAD linked oxidases, C-terminal domain K00102,K00104,K03777 - 1.1.2.4,1.1.3.15,1.1.5.12 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003028 577.0
DYD2_k127_2146278_1 4Fe-4S ferredoxin iron-sulfur binding domain protein K11473 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003873 508.0
DYD2_k127_2146278_2 FAD binding domain K11472 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000628 340.0
DYD2_k127_2152495_0 Belongs to the ClpA ClpB family K03694 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003872 427.0
DYD2_k127_2152495_1 Catalyzes two steps in the biosynthesis of coenzyme A. In the first step cysteine is conjugated to 4'-phosphopantothenate to form 4-phosphopantothenoylcysteine, in the latter compound is decarboxylated to form 4'-phosphopantotheine K13038 - 4.1.1.36,6.3.2.5 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001706 371.0
DYD2_k127_2152495_2 This enzyme is involved in nucleotide metabolism it produces dUMP, the immediate precursor of thymidine nucleotides and it decreases the intracellular concentration of dUTP so that uracil cannot be incorporated into DNA K01520 - 3.6.1.23 0.00000000000000000000000000000000000000000000000000000000000000007299 225.0
DYD2_k127_2152495_3 MASE2 domain K18968,K21085 - 2.7.7.65 0.000000000000000007583 96.0
DYD2_k127_2211151_0 Belongs to the lyase 1 family. Adenylosuccinate lyase subfamily K01756 - 4.3.2.2 7.971e-207 651.0
DYD2_k127_2211151_1 Prokaryotic N-terminal methylation motif K02655 - - 0.0000004364 58.0
DYD2_k127_2211151_2 Glutathione S-transferase K00799 - 2.5.1.18 0.000002321 50.0
DYD2_k127_2223310_0 - - - - 0.000000000000000000000000000000000000000000000008872 179.0
DYD2_k127_2223310_1 Histidine kinase - - - 0.0000000000000000000000000002461 117.0
DYD2_k127_2223667_0 Transporter, hydrophobe amphiphile efflux-1 (HAE1) family K03296,K18138 - - 0.0 1366.0
DYD2_k127_2223667_1 Pyridine nucleotide-disulphide oxidoreductase K03885 - 1.6.99.3 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001698 519.0
DYD2_k127_2223667_10 Bacterial regulatory proteins, tetR family - - - 0.000000000000000000000000000000000000000000000001199 181.0
DYD2_k127_2223667_11 - - - - 0.00000000000000000000001114 104.0
DYD2_k127_2223667_12 PQ loop repeat K15383 - - 0.00000000000000000000002575 101.0
DYD2_k127_2223667_13 - - - - 0.0000000000000000000001988 104.0
DYD2_k127_2223667_2 RND efflux system, outer membrane lipoprotein K18139 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006688 519.0
DYD2_k127_2223667_3 Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family K03585 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002589 423.0
DYD2_k127_2223667_4 ATPase, P-type (transporting), HAD superfamily, subfamily IC K17686 - 3.6.3.54 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008429 349.0
DYD2_k127_2223667_5 Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily K02015 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004704 333.0
DYD2_k127_2223667_6 Enoyl-(Acyl carrier protein) reductase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000004163 256.0
DYD2_k127_2223667_7 Tetratricopeptide repeat - - - 0.0000000000000000000000000000000000000000000000000000000000000001736 233.0
DYD2_k127_2223667_8 ATPases associated with a variety of cellular activities K02013 - 3.6.3.34 0.000000000000000000000000000000000000000000000000000000000000000693 228.0
DYD2_k127_2223667_9 MerR, DNA binding K19591,K19592 - - 0.00000000000000000000000000000000000000000000000000526 184.0
DYD2_k127_2230452_0 Phosphoribosylformylglycinamidine synthase involved in the purines biosynthetic pathway. Catalyzes the ATP-dependent conversion of formylglycinamide ribonucleotide (FGAR) and glutamine to yield formylglycinamidine ribonucleotide (FGAM) and glutamate K01952 GO:0000166,GO:0000287,GO:0003674,GO:0003824,GO:0004642,GO:0005488,GO:0005524,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006139,GO:0006163,GO:0006164,GO:0006725,GO:0006753,GO:0006793,GO:0006796,GO:0006807,GO:0008144,GO:0008150,GO:0008152,GO:0009058,GO:0009117,GO:0009165,GO:0009987,GO:0016874,GO:0016879,GO:0016884,GO:0017076,GO:0018130,GO:0019438,GO:0019637,GO:0030554,GO:0032553,GO:0032555,GO:0032559,GO:0034641,GO:0034654,GO:0035639,GO:0036094,GO:0043167,GO:0043168,GO:0043169,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0044424,GO:0044464,GO:0046483,GO:0046872,GO:0055086,GO:0071704,GO:0072521,GO:0072522,GO:0090407,GO:0097159,GO:0097367,GO:1901265,GO:1901293,GO:1901360,GO:1901362,GO:1901363,GO:1901564,GO:1901566,GO:1901576 6.3.5.3 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000517 411.0
DYD2_k127_2230452_1 Bifunctional enzyme that catalyzes the epimerization of the S- and R-forms of NAD(P)HX and the dehydration of the S-form of NAD(P)HX at the expense of ADP, which is converted to AMP. This allows the repair of both epimers of NAD(P)HX, a damaged form of NAD(P)H that is a result of enzymatic or heat-dependent hydration K17758 - 4.2.1.136 0.00000000000000000000000000000000000000000000000000000000000000000000000000000304 283.0
DYD2_k127_2230452_2 ABC-type transport system involved in lysophospholipase L1 biosynthesis ATPase component K02003 - - 0.000000000000000000000000000000000000000000000000000007948 192.0
DYD2_k127_223938_0 Transport of potassium into the cell K03549 - - 1.519e-251 785.0
DYD2_k127_223938_1 flavoprotein, PP_4765 family K07007 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001659 556.0
DYD2_k127_223938_2 methyltransferase - - - 0.0000000000000000000000000000000000000000000000000000000000009761 219.0
DYD2_k127_223938_3 Belongs to the short-chain dehydrogenases reductases (SDR) family - - - 0.000000000000000000000000000000000000000105 154.0
DYD2_k127_223938_4 Putative quorum-sensing-regulated virulence factor K09954 - - 0.0000000000000000000000000000000009691 130.0
DYD2_k127_2256258_0 ABC transporter transmembrane region K06147 - - 9.883e-259 812.0
DYD2_k127_2256258_1 Tripartite tricarboxylate transporter TctA family K07793 - - 3.491e-243 760.0
DYD2_k127_2256258_10 Transcriptional regulator K21645 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000002248 286.0
DYD2_k127_2256258_11 3-Deoxy-D-manno-octulosonic-acid transferase K02527 - 2.4.99.12,2.4.99.13,2.4.99.14,2.4.99.15 0.000000000000000000000000000000000000000000000000000000000000000000000000000000008097 284.0
DYD2_k127_2256258_12 Belongs to the short-chain dehydrogenases reductases (SDR) family - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000001345 265.0
DYD2_k127_2256258_13 lipopolysaccharide heptosyltransferase I K02841 - - 0.000000000000000000000000000000000000000000000000000000000000002149 229.0
DYD2_k127_2256258_14 Transcriptional regulator K03710 - - 0.0000000000000000000000000000000000000000000000000000000002564 213.0
DYD2_k127_2256258_15 Thioesterase superfamily protein K10806 - - 0.0000000000000000000000000000000000000000000000128 175.0
DYD2_k127_2256258_16 Tripartite tricarboxylate transporter TctB family - - - 0.000000000000000000000000000000000000001035 152.0
DYD2_k127_2256258_17 Transglycosylase associated protein - - - 0.000000000000000000000000000001178 123.0
DYD2_k127_2256258_18 Putative prokaryotic signal transducing protein - - - 0.000000000000000000002303 96.0
DYD2_k127_2256258_19 - - - - 0.000000000000000003052 90.0
DYD2_k127_2256258_2 Aspartate ammonia-lyase K01744 - 4.3.1.1 4.571e-196 621.0
DYD2_k127_2256258_20 - - - - 0.000000000000000003109 89.0
DYD2_k127_2256258_21 SMART Transport-associated and nodulation region K04065 - - 0.000000000000000003776 89.0
DYD2_k127_2256258_22 TIGRFAM type I secretion outer membrane protein, TolC family K12340 - - 0.00000000000000002297 83.0
DYD2_k127_2256258_23 - - - - 0.00000000000000009095 84.0
DYD2_k127_2256258_24 Hemerythrin HHE cation binding domain - - - 0.00002668 51.0
DYD2_k127_2256258_3 COG2133 Glucose sorbosone dehydrogenases K21430 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005769 563.0
DYD2_k127_2256258_4 Tripartite tricarboxylate transporter family receptor - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009892 499.0
DYD2_k127_2256258_5 ABC transporter K10004 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001013 419.0
DYD2_k127_2256258_6 Bacterial periplasmic substrate-binding proteins K10001 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000666 400.0
DYD2_k127_2256258_7 Binding-protein-dependent transport system inner membrane component K10002 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002651 311.0
DYD2_k127_2256258_8 Binding-protein-dependent transport system inner membrane component K02029,K10003 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009124 311.0
DYD2_k127_2256258_9 Glycosyl transferase family 2 - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001588 306.0
DYD2_k127_2264467_0 Belongs to the IlvD Edd family K01690 - 4.2.1.12 1.41e-200 640.0
DYD2_k127_2264467_1 Catalyzes the oxidation of glucose 6-phosphate to 6- phosphogluconolactone K00036 - 1.1.1.363,1.1.1.49 0.00000000000000000000000000000000000000000000000000000000000000673 225.0
DYD2_k127_2264467_2 Aldolase K01625 GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0044424,GO:0044464 4.1.2.14,4.1.3.42 0.00000000000000000000000000000000000000000000004768 177.0
DYD2_k127_2264467_3 Protein of unknown function (DUF3567) - - - 0.00000000000007101 74.0
DYD2_k127_226742_0 Part of the Sec protein translocase complex. Interacts with the SecYEG preprotein conducting channel. Has a central role in coupling the hydrolysis of ATP to the transfer of proteins into and across the cell membrane, serving both as a receptor for the preprotein-SecB complex and as an ATP-driven molecular motor driving the stepwise translocation of polypeptide chains across the membrane K03070 - - 0.0 1311.0
DYD2_k127_226742_1 Catalyzes two activities which are involved in the cyclic version of arginine biosynthesis the synthesis of N- acetylglutamate from glutamate and acetyl-CoA as the acetyl donor, and of ornithine by transacetylation between N(2)-acetylornithine and glutamate K00620 - 2.3.1.1,2.3.1.35 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003106 520.0
DYD2_k127_226742_2 Protein of unknown function (DUF815) K06923 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002972 340.0
DYD2_k127_226742_3 Cleaves type-4 fimbrial leader sequence and methylates the N-terminal (generally Phe) residue K02654 - 3.4.23.43 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000008323 282.0
DYD2_k127_226742_4 Cell division factor that enhances FtsZ-ring assembly. Directly interacts with FtsZ and promotes bundling of FtsZ protofilaments, with a reduction in FtsZ GTPase activity K18778 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000007015 275.0
DYD2_k127_226742_5 Belongs to the Nudix hydrolase family K03574 - 3.6.1.55 0.000000000000000000000000000000000000000000000000000000000003337 220.0
DYD2_k127_226742_6 Catalyzes the phosphorylation of the 3'-hydroxyl group of dephosphocoenzyme A to form coenzyme A K00859 - 2.7.1.24 0.000000000000000000000000000000000000000000000000000001108 198.0
DYD2_k127_226742_7 Peptidase M23 K08259 - 3.4.24.75 0.0000000000000000000000000000000000000000000000002427 179.0
DYD2_k127_226742_8 COG1459 Type II secretory pathway, component PulF K02653 GO:0002790,GO:0005575,GO:0005623,GO:0005886,GO:0006810,GO:0008104,GO:0008150,GO:0009297,GO:0009306,GO:0009987,GO:0015031,GO:0015628,GO:0015833,GO:0016020,GO:0016043,GO:0022607,GO:0030030,GO:0030031,GO:0032940,GO:0033036,GO:0042886,GO:0043711,GO:0044085,GO:0044464,GO:0045184,GO:0046903,GO:0051179,GO:0051234,GO:0055085,GO:0071702,GO:0071705,GO:0071806,GO:0071840,GO:0071944,GO:0098776 - 0.00000000000000000001063 93.0
DYD2_k127_2271803_0 Ankyrin repeat K06867 - - 0.0004924 53.0
DYD2_k127_2278409_0 Bacterial protein of unknown function (DUF839) K07093 - - 2.396e-217 697.0
DYD2_k127_2278409_1 Belongs to the peptidase S8 family K14645 - - 0.000000000000000000000000000000000000000000000000000000000000001803 242.0
DYD2_k127_2278409_2 membrane - - - 0.000000000000000000000000000000000000000000004449 177.0
DYD2_k127_2278409_3 Involved in lipid A export and possibly also in glycerophospholipid export and for biogenesis of the outer membrane. Transmembrane domains (TMD) form a pore in the inner membrane and the ATP-binding domain (NBD) is responsible for energy generation K02021,K11085 - - 0.0000000000000000000000000000000423 126.0
DYD2_k127_2286433_0 fatty acid desaturase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001349 366.0
DYD2_k127_2286433_1 Arabinose-binding domain of AraC transcription regulator, N-term - - - 0.00000000000000000000000000000000000000000000000000000000001796 220.0
DYD2_k127_2286433_2 COG2148 Sugar transferases involved in lipopolysaccharide synthesis - - - 0.0000000000000000000000000000000000000000000000000000001885 201.0
DYD2_k127_2286433_3 metal-binding protein - - - 0.00000000000000000000000000000000000000000000002974 174.0
DYD2_k127_2308020_0 Transcriptional regulator - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005749 413.0
DYD2_k127_2308020_1 Acetyltransferase (GNAT) domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000002094 289.0
DYD2_k127_2308020_2 Haloacid dehalogenase, type II K01560 - 3.8.1.2 0.0000000000000000000000000000000000000000000000000000000000000000000000000001638 262.0
DYD2_k127_2308020_3 Cold shock K03704 - - 0.00000000000000000000000000000004441 128.0
DYD2_k127_2326354_0 Fatty acid hydroxylase superfamily - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002398 326.0
DYD2_k127_2326354_1 LysR substrate binding domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000004266 259.0
DYD2_k127_2328907_0 Belongs to the 'phage' integrase family - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000001195 278.0
DYD2_k127_2328907_1 Protein of unknwon function (DUF3310) - - - 0.000000000000000000000000000006098 122.0
DYD2_k127_2328907_3 Hydrolyzes diadenosine 5',5'''-P1,P4-tetraphosphate to yield ADP - - - 0.00002373 52.0
DYD2_k127_2328907_4 Domain of unknown function (DUF4224) - - - 0.0003851 45.0
DYD2_k127_233324_0 Part of the Sec protein translocase complex. Interacts with the SecYEG preprotein conducting channel. SecDF uses the proton motive force (PMF) to complete protein translocation after the ATP-dependent function of SecA K03072 - - 2.759e-262 821.0
DYD2_k127_233324_1 Part of the Sec protein translocase complex. Interacts with the SecYEG preprotein conducting channel. SecDF uses the proton motive force (PMF) to complete protein translocation after the ATP-dependent function of SecA K03074 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003124 344.0
DYD2_k127_233324_2 Preprotein translocase subunit YajC K03210 - - 0.00000000000000000000000000000000001236 139.0
DYD2_k127_233324_3 peptide-methionine (S)-S-oxide reductase activity K07304 - 1.8.4.11 0.000000000000000000001151 94.0
DYD2_k127_2345307_0 Catalyzes the conversion of inosine 5'-phosphate (IMP) to xanthosine 5'-phosphate (XMP), the first committed and rate- limiting step in the de novo synthesis of guanine nucleotides, and therefore plays an important role in the regulation of cell growth K00088 - 1.1.1.205 9.051e-249 777.0
DYD2_k127_2345307_1 Catalyzes the synthesis of GMP from XMP K01951 - 6.3.5.2 0.0000000000000000000000000000000000000000000000000000000000000000000006353 239.0
DYD2_k127_2345307_2 the 2 termini fold to resemble tRNA(Ala) and it encodes a tag peptide , a short internal open reading frame. During trans-translation Ala- aminoacylated tmRNA acts like a tRNA, entering the A-site of stalled ribosomes, displacing the stalled mRNA. The ribosome then switches to translate the ORF on the tmRNA K03664 - - 0.000000000000000000000000000000000000000000000000000000000000000007666 228.0
DYD2_k127_2345307_3 diguanylate cyclase - - - 0.00000000000000000000000000000000000000000000000000000000002395 218.0
DYD2_k127_2345307_4 Polyketide cyclase / dehydrase and lipid transport - - - 0.000000000000000000000000000000000000000000000002999 177.0
DYD2_k127_2345307_5 Belongs to the UPF0125 (RnfH) family K09801 - - 0.00000001255 62.0
DYD2_k127_2349151_0 Belongs to the DEAD box helicase family - - - 0.000000000000000000000000000000000000000000000000000000000000000000000006921 250.0
DYD2_k127_2349151_1 D-Ala-D-Ala carboxypeptidase 3 (S13) family K07259 - 3.4.16.4 0.00000000000000000000000000000000000000000000000000000000000000000001339 252.0
DYD2_k127_2349151_2 Bacterial protein of unknown function (DUF883) - - - 0.0000000000000000000000000000001798 126.0
DYD2_k127_2349151_3 - - - - 0.000000000000000001199 99.0
DYD2_k127_2349151_4 membrane - - - 0.0000004094 57.0
DYD2_k127_2357168_0 First step of the lipid cycle reactions in the biosynthesis of the cell wall peptidoglycan K01000 - 2.7.8.13 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003713 600.0
DYD2_k127_2357168_1 Cell wall formation. Catalyzes the addition of glutamate to the nucleotide precursor UDP-N-acetylmuramoyl-L-alanine (UMA) K01925 - 6.3.2.9 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003089 491.0
DYD2_k127_2357168_2 Peptidoglycan polymerase that is essential for cell division K03588 - - 0.00000000000000000000000000000000000001984 151.0
DYD2_k127_2357168_3 Involved in cell wall formation. Catalyzes the final step in the synthesis of UDP-N-acetylmuramoyl-pentapeptide, the precursor of murein K01929,K15792 - 6.3.2.10,6.3.2.13 0.0000009651 52.0
DYD2_k127_2362901_0 Belongs to the TRAFAC class translation factor GTPase superfamily. Classic translation factor GTPase family. CysN NodQ subfamily K00955,K00956 - 2.7.1.25,2.7.7.4 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001819 499.0
DYD2_k127_2362901_1 With CysN catalyzes the formation of adenylylsulfate from sulfate and ATP K00957 - 2.7.7.4 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003191 476.0
DYD2_k127_2362901_2 Reduction of activated sulfate into sulfite K00390 - 1.8.4.10,1.8.4.8 0.00000000000000000000000000000000000000000000000000000000000000000000000000000001671 277.0
DYD2_k127_2362901_3 Belongs to the precorrin methyltransferase family K02303 - 2.1.1.107 0.0000000000000000000000000000000000000000000000000000000000000000003138 237.0
DYD2_k127_2376124_0 Can catalyze the hydrolysis of ATP in the presence of single-stranded DNA, the ATP-dependent uptake of single-stranded DNA by duplex DNA, and the ATP-dependent hybridization of homologous single-stranded DNAs. It interacts with LexA causing its activation and leading to its autocatalytic cleavage K03553 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002167 569.0
DYD2_k127_2376124_1 Succinyl-CoA synthetase functions in the citric acid cycle (TCA), coupling the hydrolysis of succinyl-CoA to the synthesis of either ATP or GTP and thus represents the only step of substrate-level phosphorylation in the TCA. The beta subunit provides nucleotide specificity of the enzyme and binds the substrate succinate, while the binding sites for coenzyme A and phosphate are found in the alpha subunit K01903 - 6.2.1.5 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006634 373.0
DYD2_k127_2376124_2 Catalyzes the ATP-dependent phosphorylation of thiamine- monophosphate (TMP) to form thiamine-pyrophosphate (TPP), the active form of vitamin B1 K00946 - 2.7.4.16 0.000000000000000000000000000000000000000000000000000000000000000001572 240.0
DYD2_k127_2376124_3 Lipid phosphatase which dephosphorylates phosphatidylglycerophosphate (PGP) to phosphatidylglycerol (PG) K01095 - 3.1.3.27 0.0000000000000000000000000000000000000000000000000005236 188.0
DYD2_k127_2376124_4 Involved in transcription antitermination. Required for transcription of ribosomal RNA (rRNA) genes. Binds specifically to the boxA antiterminator sequence of the ribosomal RNA (rrn) operons K03625 - - 0.00000000000000000000000000000000000000000000000109 179.0
DYD2_k127_2376124_5 Catalyzes the formation of 6,7-dimethyl-8- ribityllumazine by condensation of 5-amino-6-(D- ribitylamino)uracil with 3,4-dihydroxy-2-butanone 4-phosphate. This is the penultimate step in the biosynthesis of riboflavin K00794 - 2.5.1.78 0.000000000000000000000000000000000000000000000004024 179.0
DYD2_k127_2376124_6 Belongs to the CinA family K03743 GO:0003674,GO:0003824,GO:0016787,GO:0016810,GO:0016811,GO:0019159 3.5.1.42 0.00000000000000000000000000000000000009643 148.0
DYD2_k127_2376124_7 FAD binding domain - - - 0.00000000000000000000005105 104.0
DYD2_k127_2376124_8 Modulates RecA activity K03565 - - 0.00000005261 62.0
DYD2_k127_2383188_0 of the RND superfamily K07003 - - 5.428e-288 904.0
DYD2_k127_2383188_1 Penicillin amidase K01434 - 3.5.1.11 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001174 553.0
DYD2_k127_2383188_10 Regulatory protein K13599 - - 0.00007818 50.0
DYD2_k127_2383188_2 Protein of unknown function (DUF1329) - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001675 533.0
DYD2_k127_2383188_3 Belongs to the aldehyde dehydrogenase family K00154,K22445 - 1.2.1.68,1.2.99.10 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002906 449.0
DYD2_k127_2383188_4 Cobyrinic acid ac-diamide synthase K03496 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006935 372.0
DYD2_k127_2383188_5 protein related to plant photosystem II stability assembly factor - - - 0.00000000000000000000000000000000000000000000000000000000000003743 229.0
DYD2_k127_2383188_6 Involved in chromosome partitioning K03496 - - 0.0000000000000000000000000000005655 129.0
DYD2_k127_2383188_7 Part of the ABC transporter complex PstSACB involved in phosphate import - - - 0.0000000000000000006287 93.0
DYD2_k127_2383188_8 - - - - 0.0000000000004358 72.0
DYD2_k127_2383188_9 Putative Tad-like Flp pilus-assembly - - - 0.0000000000004962 82.0
DYD2_k127_2398246_0 Catalyzes the isomerization between 2-isopropylmalate and 3-isopropylmalate, via the formation of 2-isopropylmaleate K01703 - 4.2.1.33,4.2.1.35 8.835e-240 748.0
DYD2_k127_2398246_1 GTPase that plays an essential role in the late steps of ribosome biogenesis K03977 - - 4.946e-194 613.0
DYD2_k127_2398246_10 COG0477 Permeases of the major facilitator superfamily K05820 - - 0.000000000000000000000000000000000000000000000000000000000005104 222.0
DYD2_k127_2398246_11 Protein of unknown function (DUF962) - - - 0.0000000000000000000000000000000000000000000001844 169.0
DYD2_k127_2398246_12 Tetratricopeptide repeat-like domain - - - 0.00000000000000000000000000000000000002613 151.0
DYD2_k127_2398246_13 Converts 2C-methyl-D-erythritol 2,4-cyclodiphosphate (ME-2,4cPP) into 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate K03526 - 1.17.7.1,1.17.7.3 0.000000000000000000000003615 102.0
DYD2_k127_2398246_14 Catalyzes the NADPH-dependent formation of L-aspartate- semialdehyde (L-ASA) by the reductive dephosphorylation of L- aspartyl-4-phosphate K00133 - 1.2.1.11 0.0000000000000005018 78.0
DYD2_k127_2398246_15 Entericidin EcnA/B family - - - 0.0000004944 52.0
DYD2_k127_2398246_2 Catalyzes the anti-1,4-elimination of the C-3 phosphate and the C-6 proR hydrogen from 5-enolpyruvylshikimate-3-phosphate (EPSP) to yield chorismate, which is the branch point compound that serves as the starting substrate for the three terminal pathways of aromatic amino acid biosynthesis. This reaction introduces a second double bond into the aromatic ring system K01736 - 4.2.3.5 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008957 591.0
DYD2_k127_2398246_3 histidyl-tRNA synthetase K01892 - 6.1.1.21 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001913 580.0
DYD2_k127_2398246_4 Catalyzes the oxidation of 3-carboxy-2-hydroxy-4- methylpentanoate (3-isopropylmalate) to 3-carboxy-4-methyl-2- oxopentanoate. The product decarboxylates to 4-methyl-2 oxopentanoate K00052 GO:0003674,GO:0003824,GO:0003862,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006082,GO:0006520,GO:0006551,GO:0006807,GO:0008150,GO:0008152,GO:0008652,GO:0009058,GO:0009081,GO:0009082,GO:0009098,GO:0009987,GO:0016053,GO:0016491,GO:0016614,GO:0016616,GO:0019752,GO:0043436,GO:0044237,GO:0044238,GO:0044249,GO:0044281,GO:0044283,GO:0044424,GO:0044444,GO:0044464,GO:0046394,GO:0055114,GO:0071704,GO:1901564,GO:1901566,GO:1901576,GO:1901605,GO:1901607 1.1.1.85 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001076 514.0
DYD2_k127_2398246_5 Catalyzes the isomerization between 2-isopropylmalate and 3-isopropylmalate, via the formation of 2-isopropylmaleate K01704 - 4.2.1.33,4.2.1.35 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002616 323.0
DYD2_k127_2398246_6 Peptidase M48 - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001072 314.0
DYD2_k127_2398246_7 Part of the outer membrane protein assembly complex, which is involved in assembly and insertion of beta-barrel proteins into the outer membrane K17713 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000003667 285.0
DYD2_k127_2398246_8 FAD dependent oxidoreductase K06955 - - 0.0000000000000000000000000000000000000000000000000000000000000000008344 240.0
DYD2_k127_2398246_9 CBS domain containing protein - - - 0.0000000000000000000000000000000000000000000000000000000000001129 216.0
DYD2_k127_2399799_0 Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004649 426.0
DYD2_k127_2399799_1 Sulfate tungstate uptake family ABC transporter, periplasmic substrate-binding protein K05772 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005948 370.0
DYD2_k127_2399799_2 COG1910, Periplasmic molybdate-binding protein domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000004364 282.0
DYD2_k127_2399799_3 ABC-type tungstate transport system, periplasmic component K05773 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000001054 267.0
DYD2_k127_2399799_4 Chromate Ion Transporter K07240 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000005509 257.0
DYD2_k127_2399799_5 Flavodoxin-like fold - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000007909 260.0
DYD2_k127_2399799_6 ABC transporter K06857 - 3.6.3.55 0.0000000000000000000000000000000000000000000000000000000002987 211.0
DYD2_k127_2399799_7 protein, possibly involved in aromatic compounds catabolism - - - 0.000000000000000000000000000000000000000000000000000754 186.0
DYD2_k127_2403873_0 ATPase that binds to both the 70S ribosome and the 50S ribosomal subunit in a nucleotide-independent manner K06942 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001785 551.0
DYD2_k127_2403873_1 - - - - 0.0000000000000000000000000000000000000000002577 165.0
DYD2_k127_2403873_2 - - - - 0.0000000000000000000000000002589 117.0
DYD2_k127_2403873_3 ferredoxin - - - 0.00008661 46.0
DYD2_k127_2434757_0 The central subunit of the protein translocation channel SecYEG. Consists of two halves formed by TMs 1-5 and 6-10. These two domains form a lateral gate at the front which open onto the bilayer between TMs 2 and 7, and are clamped together by SecE at the back. The channel is closed by both a pore ring composed of hydrophobic SecY resides and a short helix (helix 2A) on the extracellular side of the membrane which forms a plug. The plug probably moves laterally to allow the channel to open. The ring and the pore may move independently K03076 - - 2.77e-217 681.0
DYD2_k127_2434757_1 DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates K03040 GO:0003674,GO:0003824,GO:0003899,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006139,GO:0006351,GO:0006354,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0016070,GO:0016740,GO:0016772,GO:0016779,GO:0018130,GO:0019438,GO:0032774,GO:0034062,GO:0034641,GO:0034645,GO:0034654,GO:0043170,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044271,GO:0044424,GO:0044464,GO:0046483,GO:0071704,GO:0090304,GO:0097659,GO:0097747,GO:0140098,GO:1901360,GO:1901362,GO:1901576 2.7.7.6 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006055 488.0
DYD2_k127_2434757_10 Ribosomal protein L17 K02879 - - 0.00000000000000000000000000000000000000000000000000000000000007624 214.0
DYD2_k127_2434757_11 Located at the top of the head of the 30S subunit, it contacts several helices of the 16S rRNA. In the 70S ribosome it contacts the 23S rRNA (bridge B1a) and protein L5 of the 50S subunit (bridge B1b), connecting the 2 subunits K02952 - - 0.0000000000000000000000000000000000000000000000000000000001381 204.0
DYD2_k127_2434757_12 Mediates influx of magnesium ions K03284 - - 0.0000000000000000000000000000000000000000000000000000000002017 216.0
DYD2_k127_2434757_13 Ribosomal proteins 50S-L15, 50S-L18e, 60S-L27A K02876 - - 0.00000000000000000000000000000000000000000000000000001564 191.0
DYD2_k127_2434757_14 Belongs to the ALAD family K01698 GO:0003674,GO:0003824,GO:0004655,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006725,GO:0006778,GO:0006779,GO:0006783,GO:0006807,GO:0008150,GO:0008152,GO:0008270,GO:0009058,GO:0009987,GO:0016829,GO:0016835,GO:0016836,GO:0018130,GO:0019438,GO:0033013,GO:0033014,GO:0034641,GO:0042168,GO:0042440,GO:0043167,GO:0043169,GO:0044237,GO:0044249,GO:0044271,GO:0044424,GO:0044444,GO:0044464,GO:0046148,GO:0046483,GO:0046872,GO:0046914,GO:0051186,GO:0051188,GO:0071704,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576 4.2.1.24 0.0000000000000000000000000000000000000007663 148.0
DYD2_k127_2434757_15 One of the essential components for the initiation of protein synthesis. Stabilizes the binding of IF-2 and IF-3 on the 30S subunit to which N-formylmethionyl-tRNA(fMet) subsequently binds. Helps modulate mRNA selection, yielding the 30S pre- initiation complex (PIC). Upon addition of the 50S ribosomal subunit IF-1, IF-2 and IF-3 are released leaving the mature 70S translation initation complex K02518 - - 0.000000000000000000000000000000000000002682 146.0
DYD2_k127_2434757_16 This is one of the proteins that binds and probably mediates the attachment of the 5S RNA into the large ribosomal subunit, where it forms part of the central protuberance K02881 - - 0.000000000000000000000000000000006376 130.0
DYD2_k127_2434757_17 tolerance protein K03926 GO:0003674,GO:0005488,GO:0005507,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0043167,GO:0043169,GO:0044424,GO:0044464,GO:0046872,GO:0046914 - 0.0000000000000000000008082 98.0
DYD2_k127_2434757_18 Ribosomal protein L30 K02907 - - 0.000000000000000000006551 93.0
DYD2_k127_2434757_19 Belongs to the bacterial ribosomal protein bL36 family K02919 - - 0.00000000000005362 72.0
DYD2_k127_2434757_2 Required to facilitate the formation of correct disulfide bonds in some periplasmic proteins and for the assembly of the periplasmic c-type cytochromes. Acts by transferring electrons from cytoplasmic thioredoxin to the periplasm. This transfer involves a cascade of disulfide bond formation and reduction steps K04084 - 1.8.1.8 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001569 445.0
DYD2_k127_2434757_3 One of the primary rRNA binding proteins, it binds directly to 16S rRNA where it nucleates assembly of the body of the 30S subunit K02986 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002841 344.0
DYD2_k127_2434757_4 AAA domain, putative AbiEii toxin, Type IV TA system K01990,K09695 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000006492 304.0
DYD2_k127_2434757_5 Located at the back of the 30S subunit body where it stabilizes the conformation of the head with respect to the body K02988 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000001661 259.0
DYD2_k127_2434757_6 Transport permease protein K09694 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000003046 257.0
DYD2_k127_2434757_7 This protein binds to the 23S rRNA, and is important in its secondary structure. It is located near the subunit interface in the base of the L7 L12 stalk, and near the tRNA binding site of the peptidyltransferase center K02933 - - 0.000000000000000000000000000000000000000000000000000000000000000001058 231.0
DYD2_k127_2434757_8 One of the primary rRNA binding proteins, it binds directly to 16S rRNA central domain where it helps coordinate assembly of the platform of the 30S subunit K02994 - - 0.00000000000000000000000000000000000000000000000000000000000000002709 224.0
DYD2_k127_2434757_9 Located on the platform of the 30S subunit, it bridges several disparate RNA helices of the 16S rRNA. Forms part of the Shine-Dalgarno cleft in the 70S ribosome K02948 - - 0.0000000000000000000000000000000000000000000000000000000000000001663 222.0
DYD2_k127_2438097_0 intramolecular transferase activity, transferring amino groups K01845 - 5.4.3.8 2.365e-205 646.0
DYD2_k127_2438097_1 PFAM DNA photolyase, FAD-binding K01669 - 4.1.99.3 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005487 590.0
DYD2_k127_2438097_10 esterase K12686 - - 0.000000000000000000000000000000000006127 156.0
DYD2_k127_2438097_11 Could be a nuclease involved in processing of the 5'-end of pre-16S rRNA K07447 - - 0.000000000000000000000000000000001069 134.0
DYD2_k127_2438097_12 - - - - 0.0000000000000000000000000000000423 126.0
DYD2_k127_2438097_13 Phosphomethylpyrimidine kinase K00941 - 2.7.1.49,2.7.4.7 0.000000000000000002783 86.0
DYD2_k127_2438097_14 Hydrolyzes diadenosine 5',5'''-P1,P4-tetraphosphate to yield ADP K01525 - 3.6.1.41 0.00000000000000005674 82.0
DYD2_k127_2438097_2 Amidohydrolase family K01465 - 3.5.2.3 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007446 558.0
DYD2_k127_2438097_3 Belongs to the ATCase OTCase family K00609 - 2.1.3.2 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001251 505.0
DYD2_k127_2438097_4 Belongs to the UPF0301 (AlgH) family K07735 - - 0.00000000000000000000000000000000000000000000000000000000001643 213.0
DYD2_k127_2438097_5 Pyrimidine operon attenuation protein uracil phosphoribosyltransferase K02825 - 2.4.2.9 0.00000000000000000000000000000000000000000000000001912 185.0
DYD2_k127_2438097_6 MAPEG family - - - 0.000000000000000000000000000000000000000000000002416 176.0
DYD2_k127_2438097_7 protein encoded in hypervariable junctions of pilus gene clusters - - - 0.0000000000000000000000000000000000000000000002653 168.0
DYD2_k127_2438097_8 acyltransferase K00655 - 2.3.1.51 0.0000000000000000000000000000000000000000001392 168.0
DYD2_k127_2438097_9 Condenses 4-methyl-5-(beta-hydroxyethyl)thiazole monophosphate (THZ-P) and 2-methyl-4-amino-5-hydroxymethyl pyrimidine pyrophosphate (HMP-PP) to form thiamine monophosphate (TMP) K00788 - 2.5.1.3 0.0000000000000000000000000000000000000001092 159.0
DYD2_k127_2474920_0 PFAM ABC transporter related K12541 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000207 441.0
DYD2_k127_2474920_1 COG0845 Membrane-fusion protein K12542 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001159 374.0
DYD2_k127_2474920_2 Outer membrane efflux protein K12340,K12543 - - 0.00000000000000000000000000000000000000000003071 181.0
DYD2_k127_2482082_0 Tartrate dehydrogenase K07246 GO:0003674,GO:0003824,GO:0003862,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006082,GO:0006520,GO:0006551,GO:0006807,GO:0008150,GO:0008152,GO:0008652,GO:0009058,GO:0009081,GO:0009082,GO:0009098,GO:0009987,GO:0016053,GO:0016491,GO:0016614,GO:0016616,GO:0019752,GO:0043436,GO:0044237,GO:0044238,GO:0044249,GO:0044281,GO:0044283,GO:0044424,GO:0044444,GO:0044464,GO:0046394,GO:0055114,GO:0071704,GO:1901564,GO:1901566,GO:1901576,GO:1901605,GO:1901607 1.1.1.83,1.1.1.93,4.1.1.73 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001173 547.0
DYD2_k127_2482082_1 C-terminal, D2-small domain, of ClpB protein K11907 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008371 512.0
DYD2_k127_2482082_2 Sel1-like repeats. K07126 - - 0.0000000000000000001131 103.0
DYD2_k127_249049_0 Trypsin K08070 - 1.3.1.74 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001085 357.0
DYD2_k127_249049_1 COG1179 Dinucleotide-utilizing enzymes involved in molybdopterin and thiamine biosynthesis family 1 K22132 - - 0.000000000000000000000000000000000000000000000000000000000000000000001524 244.0
DYD2_k127_249049_2 Has an important function as a repair enzyme for proteins that have been inactivated by oxidation. Catalyzes the reversible oxidation-reduction of methionine sulfoxide in proteins to methionine K07304 - 1.8.4.11 0.000000000000000000000000000000000000000000000000000000000000000000006987 239.0
DYD2_k127_249049_3 Preprotein translocase subunit YajC K03210 - - 0.00000000000000000000000000000000008208 137.0
DYD2_k127_249049_4 Part of the Sec protein translocase complex. Interacts with the SecYEG preprotein conducting channel. SecDF uses the proton motive force (PMF) to complete protein translocation after the ATP-dependent function of SecA K03072 - - 0.0000000000000003844 78.0
DYD2_k127_2494861_0 2OG-Fe(II) oxygenase K07394 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000001954 257.0
DYD2_k127_2494861_1 Chemotaxis signal transduction protein K03415 - - 0.00000000000000000000000000000000000000000000000000000000002245 214.0
DYD2_k127_2494861_2 Protein of unknown function (DUF1109) - - - 0.000000000000000000000000000000000000005771 149.0
DYD2_k127_2499347_0 Belongs to the pseudouridine synthase RsuA family K06178 - 5.4.99.22 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002661 351.0
DYD2_k127_2499347_1 Participates in chromosomal partition during cell division. May act via the formation of a condensin-like complex containing Smc and ScpA that pull DNA away from mid-cell into both cell halves K06024 - - 0.0000000000000000000000000000000000000000000000000000000000000000004014 234.0
DYD2_k127_2499347_2 COG0466 ATP-dependent Lon protease, bacterial type - - - 0.0000000000000000000000000000000000000004907 153.0
DYD2_k127_2499347_3 Protein of unknown function (DUF1289) K06938 - - 0.000000000000001038 78.0
DYD2_k127_2499347_4 - - - - 0.00000000002951 63.0
DYD2_k127_2535062_0 Adenylyl- / guanylyl cyclase, catalytic domain K01768 - 4.6.1.1 2.658e-226 723.0
DYD2_k127_2535062_1 TIGRFAM filamentous hemagglutinin family N-terminal domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004195 345.0
DYD2_k127_2535062_2 Haemolysin secretion/activation protein ShlB/FhaC/HecB - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000001514 280.0
DYD2_k127_2535062_3 cAMP phosphodiesterases class-II K01120 - 3.1.4.17 0.00000000000000000000000000000000000000000000000000000000000000001874 232.0
DYD2_k127_2535062_4 Patatin-like phospholipase K07001 - - 0.000000000000000000000000000000000000000000000000000000701 213.0
DYD2_k127_2535062_5 FecR protein - - - 0.000000000000000000000000000000000000000000002702 182.0
DYD2_k127_2535062_6 AsmA family - - - 0.00000000000000001043 85.0
DYD2_k127_2539199_0 Tripartite ATP-independent periplasmic transporter, DctM component - - - 1.536e-242 764.0
DYD2_k127_2539199_1 Part of the tripartite ATP-independent periplasmic (TRAP) transport system - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001764 576.0
DYD2_k127_2539199_2 Haemolysin secretion/activation protein ShlB/FhaC/HecB - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001209 586.0
DYD2_k127_2539199_3 TIGRFAM filamentous haemagglutinin family outer membrane protein - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000002872 299.0
DYD2_k127_2539199_4 TRAP-type mannitol chloroaromatic compound transport system small permease component - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000001427 273.0
DYD2_k127_2539199_5 domain, Protein - - - 0.00000000000000000000000000000000000000000000000000000001271 204.0
DYD2_k127_2545402_0 DNA polymerase involved in damage-induced mutagenesis and translesion synthesis (TLS). It is not the major replicative DNA polymerase K14162 - 2.7.7.7 2.805e-315 983.0
DYD2_k127_2547914_0 Catalyzes the conversion of acetate into acetyl-CoA (AcCoA), an essential intermediate at the junction of anabolic and catabolic pathways. AcsA undergoes a two-step reaction. In the first half reaction, AcsA combines acetate with ATP to form acetyl-adenylate (AcAMP) intermediate. In the second half reaction, it can then transfer the acetyl group from AcAMP to the sulfhydryl group of CoA, forming the product AcCoA K01895 - 6.2.1.1 0.0 1115.0
DYD2_k127_2547914_1 Belongs to the sodium solute symporter (SSF) (TC 2.A.21) family K14393 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005983 383.0
DYD2_k127_2547914_2 Uncharacterized protein family, UPF0114 - - - 0.0000001641 56.0
DYD2_k127_2566742_0 COG0454 Histone acetyltransferase HPA2 and related acetyltransferases - - - 1.293e-274 852.0
DYD2_k127_2566742_1 Sulfate permease family K03321 - - 2.32e-246 767.0
DYD2_k127_2566742_2 Alanine-glyoxylate amino-transferase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001113 464.0
DYD2_k127_2566742_3 helix_turn_helix ASNC type - - - 0.00000000000000000000000000000000000000000000000000000000000009437 216.0
DYD2_k127_2566742_4 major facilitator superfamily - - - 0.0000000000000000000000000000000000000000001982 162.0
DYD2_k127_2580739_0 2-methylisocitrate dehydratase, Fe S-dependent K20455 - 4.2.1.117 0.0 1449.0
DYD2_k127_2580739_1 2-methylisocitrate dehydratase activity K01682 GO:0003674,GO:0003676,GO:0003723,GO:0003729,GO:0003730,GO:0003824,GO:0003994,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005975,GO:0006081,GO:0006082,GO:0006091,GO:0006097,GO:0006099,GO:0006101,GO:0006417,GO:0006629,GO:0006631,GO:0008150,GO:0008152,GO:0009056,GO:0009060,GO:0009062,GO:0009889,GO:0009987,GO:0010468,GO:0010556,GO:0010608,GO:0015980,GO:0016042,GO:0016054,GO:0016829,GO:0016835,GO:0016836,GO:0016999,GO:0017001,GO:0017144,GO:0019222,GO:0019541,GO:0019543,GO:0019626,GO:0019629,GO:0019752,GO:0031323,GO:0031326,GO:0032268,GO:0032787,GO:0034248,GO:0042737,GO:0043436,GO:0044237,GO:0044238,GO:0044242,GO:0044248,GO:0044255,GO:0044262,GO:0044281,GO:0044282,GO:0044424,GO:0044444,GO:0044464,GO:0045333,GO:0046395,GO:0046459,GO:0046487,GO:0047456,GO:0048037,GO:0050789,GO:0050794,GO:0051171,GO:0051246,GO:0051536,GO:0051539,GO:0051540,GO:0055114,GO:0060255,GO:0065007,GO:0071704,GO:0072329,GO:0072350,GO:0080090,GO:0097159,GO:1901363,GO:1901575,GO:2000112 4.2.1.3,4.2.1.99 0.0 1008.0
DYD2_k127_2580739_2 protein conserved in bacteria K09788 GO:0003674,GO:0003824,GO:0006082,GO:0006629,GO:0006631,GO:0008150,GO:0008152,GO:0009056,GO:0009062,GO:0009987,GO:0016042,GO:0016054,GO:0016853,GO:0016860,GO:0016863,GO:0016999,GO:0017001,GO:0017144,GO:0019541,GO:0019543,GO:0019626,GO:0019629,GO:0019752,GO:0032787,GO:0042737,GO:0043436,GO:0044237,GO:0044238,GO:0044242,GO:0044248,GO:0044255,GO:0044281,GO:0044282,GO:0046395,GO:0046459,GO:0071704,GO:0072329,GO:1901575 - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006176 435.0
DYD2_k127_2580739_3 Belongs to the amidase family K01426,K02433 - 3.5.1.4,6.3.5.6,6.3.5.7 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006674 443.0
DYD2_k127_2580739_4 protein conserved in bacteria K09788 GO:0003674,GO:0003824,GO:0006082,GO:0006629,GO:0006631,GO:0008150,GO:0008152,GO:0009056,GO:0009062,GO:0009987,GO:0016042,GO:0016054,GO:0016853,GO:0016860,GO:0016863,GO:0016999,GO:0017001,GO:0017144,GO:0019541,GO:0019543,GO:0019626,GO:0019629,GO:0019752,GO:0032787,GO:0042737,GO:0043436,GO:0044237,GO:0044238,GO:0044242,GO:0044248,GO:0044255,GO:0044281,GO:0044282,GO:0046395,GO:0046459,GO:0071704,GO:0072329,GO:1901575 - 0.00000000000000000000000000000000000000000000000000000000000000000000000006615 250.0
DYD2_k127_2584328_0 CoA-transferase family III K07749 - 2.8.3.16 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005795 533.0
DYD2_k127_2584328_1 May play a role in DNA repair. It seems to be involved in an RecBC-independent recombinational process of DNA repair. It may act with RecF and RecO K06187 - - 0.000000000000000000000000000000000000000000000000000000000000000000000002238 248.0
DYD2_k127_2585811_0 Catalyzes the interconversion between ADP-D-glycero- beta-D-manno-heptose and ADP-L-glycero-beta-D-manno-heptose via an epimerization at carbon 6 of the heptose K03274 - 5.1.3.20 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005215 472.0
DYD2_k127_2585811_1 pfkB family carbohydrate kinase K03272,K21344 - 2.7.1.167,2.7.7.70 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002754 378.0
DYD2_k127_2585811_2 Modulates cellular lipopolysaccharide (LPS) levels by regulating LpxC, which is involved in lipid A biosynthesis. May act by modulating the proteolytic activity of FtsH towards LpxC. May also coordinate assembly of proteins involved in LPS synthesis at the plasma membrane K19804 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008117 382.0
DYD2_k127_2585811_3 Belongs to the bacterial ribosomal protein bS16 family K02959 - - 0.0000000000000000000000000000000001234 134.0
DYD2_k127_2585811_4 This protein is one of the two subunits of integration host factor, a specific DNA-binding protein that functions in genetic recombination as well as in transcriptional and translational control K05788 - - 0.000000000000000000000000000000001299 130.0
DYD2_k127_2585811_5 An accessory protein needed during the final step in the assembly of 30S ribosomal subunit, possibly for assembly of the head region. Probably interacts with S19. Essential for efficient processing of 16S rRNA. May be needed both before and after RbfA during the maturation of 16S rRNA. It has affinity for free ribosomal 30S subunits but not for 70S ribosomes K02860 - - 0.0000000000392 66.0
DYD2_k127_2585811_6 TM2 domain - - - 0.00000000062 64.0
DYD2_k127_2585811_7 Lipopolysaccharide assembly protein A domain - - - 0.00002597 51.0
DYD2_k127_260299_0 Peptide chain release factor 2 directs the termination of translation in response to the peptide chain termination codons UGA and UAA K02836 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009329 513.0
DYD2_k127_260299_1 Single-stranded-DNA-specific exonuclease RecJ K07462 - - 0.000000000000000000000000000000000000000000000003056 178.0
DYD2_k127_2616898_0 PFAM AsmA family protein K07289,K07290 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002934 450.0
DYD2_k127_2616898_1 Specifically methylates the adenine in position 1618 of 23S rRNA K06970 - 2.1.1.181 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001137 374.0
DYD2_k127_2616898_2 propionate catabolism operon regulatory protein K02688 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001927 373.0
DYD2_k127_2616898_3 Belongs to the HpcH HpaI aldolase family K01644 - 4.1.3.34 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000103 306.0
DYD2_k127_2616898_4 Catalyzes the thermodynamically favored C-C bond cleavage of (2R,3S)-2-methylisocitrate to yield pyruvate and succinate K01841,K03417 - 4.1.3.30,5.4.2.9 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000007632 296.0
DYD2_k127_2616898_5 PFAM Class I peptide chain release factor K15034 - - 0.000000000000000000000000000000000000000000000002888 175.0
DYD2_k127_2616898_6 Proteolipid membrane potential modulator - - - 0.00000000000000000000006436 100.0
DYD2_k127_2616898_7 - - - - 0.000000000000000000001352 98.0
DYD2_k127_2616898_8 - - - - 0.00000000001216 71.0
DYD2_k127_2622482_0 Binds and transfers iron-sulfur (Fe-S) clusters to target apoproteins. Can hydrolyze ATP K03593 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009459 551.0
DYD2_k127_2622482_1 Belongs to the dCTP deaminase family K01494 - 3.5.4.13 0.000000000000000000000000000000000000000000000000000000000000000000000000000005178 262.0
DYD2_k127_2622482_2 Protein of unknown function (DUF2804) - - - 0.00000000000000000000000000000000000000000000000000000006167 208.0
DYD2_k127_2622482_3 Alpha/beta hydrolase family K01259 - 3.4.11.5 0.000000000000000000000000000005251 132.0
DYD2_k127_2622482_4 Rubredoxin - - - 0.000000000000000000000007816 101.0
DYD2_k127_2623101_0 peptidase dimerisation domain protein K01451 - 3.5.1.32 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001082 486.0
DYD2_k127_2623101_1 Glutamine amidotransferases class-II - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007575 355.0
DYD2_k127_2623101_2 zinc protease protein - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009677 330.0
DYD2_k127_2623101_3 Domain of unknown function (DUF4147) K11529 - 2.7.1.165 0.0000000000000000006188 91.0
DYD2_k127_2638380_0 Required for the insertion and or proper folding and or complex formation of integral membrane proteins into the membrane. Involved in integration of membrane proteins that insert both dependently and independently of the Sec translocase complex, as well as at least some lipoproteins. Aids folding of multispanning membrane proteins K03217 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005693 573.0
DYD2_k127_2638380_1 it binds specifically double-stranded DNA at a 9 bp consensus (dnaA box) 5'-TTATC CA A CA A-3'. DnaA binds to ATP and to acidic phospholipids K02313 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000516 554.0
DYD2_k127_2638380_2 Exhibits a very high intrinsic GTPase hydrolysis rate. Involved in the addition of a carboxymethylaminomethyl (cmnm) group at the wobble position (U34) of certain tRNAs, forming tRNA- cmnm(5)s(2)U34 K03650 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006307 464.0
DYD2_k127_2638380_3 Histidine kinase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002481 347.0
DYD2_k127_2638380_4 Could be involved in insertion of integral membrane proteins into the membrane K08998 - - 0.0000000000000000000000004446 106.0
DYD2_k127_2638380_5 ABC-type amino acid transport signal transduction systems periplasmic component domain - - - 0.000000000000000000001787 102.0
DYD2_k127_2638380_6 Ribosomal protein L34 K02914 - - 0.00000000000001576 74.0
DYD2_k127_2638380_7 response regulator K07684 - - 0.00000000006987 71.0
DYD2_k127_2638380_8 RNaseP catalyzes the removal of the 5'-leader sequence from pre-tRNA to produce the mature 5'-terminus. It can also cleave other RNA substrates such as 4.5S RNA. The protein component plays an auxiliary but essential role in vivo by binding to the 5'-leader sequence and broadening the substrate specificity of the ribozyme K03536 - 3.1.26.5 0.0001799 49.0
DYD2_k127_2638380_9 ABC-type phosphate transport system, periplasmic component - - - 0.0005208 49.0
DYD2_k127_2661584_0 GMC oxidoreductase K03333 - 1.1.3.6 7.903e-226 702.0
DYD2_k127_2661584_1 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily K01759 - 4.4.1.5 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000003304 296.0
DYD2_k127_2661584_2 Belongs to the UPF0758 family K03630 - - 0.00000000000000000000000000000000000000000000000000000000001737 213.0
DYD2_k127_2661584_3 Belongs to the bacterial ribosomal protein bL28 family K02902 - - 0.000000000000000000000000000000000000002718 147.0
DYD2_k127_2661584_4 Ribbon-helix-helix domain - - - 0.00000000000000000000000000000000002338 137.0
DYD2_k127_2661584_5 Belongs to the bacterial ribosomal protein bL33 family K02913 - - 0.0000000000000000000000001783 105.0
DYD2_k127_2683090_0 Alkyl hydroperoxide reductase K03387 GO:0000166,GO:0003674,GO:0003824,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0008150,GO:0008152,GO:0008785,GO:0009321,GO:0016491,GO:0016651,GO:0016667,GO:0016668,GO:0032991,GO:0036094,GO:0043167,GO:0043168,GO:0044424,GO:0044444,GO:0044464,GO:0048037,GO:0050660,GO:0050662,GO:0055114,GO:0071949,GO:0097159,GO:1901265,GO:1901363,GO:1902494,GO:1990204 - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002149 305.0
DYD2_k127_2683090_1 Membrane - - - 0.00000000000000000000000000000000000000000000000001042 188.0
DYD2_k127_2683090_2 PepSY-associated TM region - - - 0.00000000000000000000000000000000000000000000000008209 180.0
DYD2_k127_2683090_3 Hemerythrin HHE cation binding domain - - - 0.00000000000000000000000000000000000000000000005168 176.0
DYD2_k127_2683090_4 Protein of unknown function (DUF3325) - - - 0.000000000000005511 79.0
DYD2_k127_2683090_5 - - - - 0.00001196 50.0
DYD2_k127_268710_0 4Fe-4S iron sulfur cluster binding proteins, NifH/frxC family K03496 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001035 386.0
DYD2_k127_268710_1 Belongs to the ParB family K03497 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005143 360.0
DYD2_k127_268710_2 it plays a direct role in the translocation of protons across the membrane K02108 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005453 304.0
DYD2_k127_268710_3 Specifically methylates the N7 position of guanine in position 527 of 16S rRNA K03501 - 2.1.1.170 0.0000000000000000000000000000000000000000000000000005705 191.0
DYD2_k127_268710_4 ATP synthase I chain K02116 - - 0.000000006751 61.0
DYD2_k127_268710_5 NAD-binding protein involved in the addition of a carboxymethylaminomethyl (cmnm) group at the wobble position (U34) of certain tRNAs, forming tRNA-cmnm(5)s(2)U34 K03495 - - 0.00000006263 54.0
DYD2_k127_271195_0 TRAP-type C4-dicarboxylate transport system periplasmic component - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000784 282.0
DYD2_k127_271195_1 Protein of unknown function (DUF1232) - - - 0.00000000000006766 78.0
DYD2_k127_271195_2 Polyketide cyclase / dehydrase and lipid transport - - - 0.000005405 57.0
DYD2_k127_2715449_0 Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family K07787 - - 1.495e-233 730.0
DYD2_k127_2715449_1 Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family K07798 - - 0.000000000000000000004668 96.0
DYD2_k127_2718858_0 Catalyzes the conversion of D-ribulose 5-phosphate to formate and 3,4-dihydroxy-2-butanone 4-phosphate K14652 - 3.5.4.25,4.1.99.12 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003837 515.0
DYD2_k127_2718858_1 CBS domain containing protein K06189 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004177 372.0
DYD2_k127_2718858_2 Transfers the fatty acyl group on membrane lipoproteins K03820 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000009987 309.0
DYD2_k127_2718858_3 Catalyzes the formation of 6,7-dimethyl-8- ribityllumazine by condensation of 5-amino-6-(D- ribitylamino)uracil with 3,4-dihydroxy-2-butanone 4-phosphate. This is the penultimate step in the biosynthesis of riboflavin K00794 - 2.5.1.78 0.0000000000001196 72.0
DYD2_k127_2739533_0 thus facilitating recognition of the initiation point. It is needed to translate mRNA with a short Shine-Dalgarno (SD) purine-rich sequence K02945 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006023 437.0
DYD2_k127_2739533_1 Catalyzes the transfer of the enolpyruvyl moiety of phosphoenolpyruvate (PEP) to the 5-hydroxyl of shikimate-3- phosphate (S3P) to produce enolpyruvyl shikimate-3-phosphate and inorganic phosphate K00800 - 2.5.1.19 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002542 332.0
DYD2_k127_2739533_2 Catalyzes the transfer of the enolpyruvyl moiety of phosphoenolpyruvate (PEP) to the 5-hydroxyl of shikimate-3- phosphate (S3P) to produce enolpyruvyl shikimate-3-phosphate and inorganic phosphate K00800 - 2.5.1.19 0.00000000000000000000000000000000000000000000000000000000000000000000006242 246.0
DYD2_k127_2741398_0 DEAD DEAH box helicase K03724 - - 0.0 1024.0
DYD2_k127_2741398_1 Oxidizes proline to glutamate for use as a carbon and nitrogen source K00249,K00294,K13821 - 1.2.1.88,1.3.8.7,1.5.5.2 1.796e-302 963.0
DYD2_k127_2741398_10 PFAM metallophosphoesterase K06953 - - 0.000000000000000000000000000000000000000000000000000000000000002266 224.0
DYD2_k127_2741398_11 helix_turn_helix ASNC type - - - 0.000000000000000000000000000000000000000000000000000000003116 206.0
DYD2_k127_2741398_12 Bacterial regulatory proteins, tetR family - - - 0.00000000000000000000000000000000000000000000000000000001893 203.0
DYD2_k127_2741398_13 regulatory - - - 0.000000000000000000000000000000000000000000000000002785 186.0
DYD2_k127_2741398_14 PFAM DoxX family protein K15977 - - 0.000000000000000000000000000000000000000006303 158.0
DYD2_k127_2741398_15 acetyltransferase - - - 0.0000000000000000000000000000003698 127.0
DYD2_k127_2741398_16 Enoyl-CoA hydratase/isomerase K01692 - 4.2.1.17 0.000000000000001616 78.0
DYD2_k127_2741398_17 - - - - 0.0000000000001493 80.0
DYD2_k127_2741398_18 LTXXQ motif family protein K06006 GO:0003674,GO:0005488,GO:0005515,GO:0005575,GO:0005623,GO:0006457,GO:0008150,GO:0009987,GO:0010033,GO:0014070,GO:0030288,GO:0030313,GO:0031975,GO:0042221,GO:0042597,GO:0044464,GO:0050896,GO:0051082,GO:0061077,GO:1990507 - 0.000000006452 66.0
DYD2_k127_2741398_2 Acyclic terpene utilisation family protein AtuA - - - 2.566e-194 623.0
DYD2_k127_2741398_3 DNA ligase N terminus K10747 - 6.5.1.1,6.5.1.6,6.5.1.7 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006803 592.0
DYD2_k127_2741398_4 Ornithine cyclodeaminase/mu-crystallin family K01750 - 4.3.1.12 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008631 418.0
DYD2_k127_2741398_5 Belongs to the arginase family K01476 - 3.5.3.1 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002695 321.0
DYD2_k127_2741398_6 - - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000001086 281.0
DYD2_k127_2741398_7 Reversible hydration of carbon dioxide K01673 - 4.2.1.1 0.00000000000000000000000000000000000000000000000000000000000000000000000000000002485 274.0
DYD2_k127_2741398_8 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase K02484 - 2.7.13.3 0.000000000000000000000000000000000000000000000000000000000000000000000000000288 273.0
DYD2_k127_2741398_9 Copper-sensing two-component system response regulator CpxR - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000004294 255.0
DYD2_k127_2757886_0 Catalyzes the first step in hexosamine metabolism, converting fructose-6P into glucosamine-6P using glutamine as a nitrogen source K00820 - 2.6.1.16 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008203 499.0
DYD2_k127_2757886_1 transcriptional regulator - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000004432 270.0
DYD2_k127_2757886_2 Alpha beta hydrolase fold - - - 0.0000000000000000000000000000000000000000000000000000000000000000000009633 247.0
DYD2_k127_2757886_3 Acetyl-coenzyme A transporter 1 K08218 - - 0.000000000000000000000000000000000000000000000000000000000000002932 221.0
DYD2_k127_2757886_4 KR domain - - - 0.000000000000000000000000000000000000000000000000000006661 199.0
DYD2_k127_2770591_0 Required for formation of the rod structure of the flagellar apparatus. Together with FliI and FliH, may constitute the export apparatus of flagellin K02400 - - 1.649e-262 824.0
DYD2_k127_2770591_1 SRP54-type protein, GTPase domain K02404 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004977 325.0
DYD2_k127_2770591_2 Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released. This sigma factor controls the expression of flagella-related genes K02405 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000996 299.0
DYD2_k127_2770591_3 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase - - - 0.000000000000000000000000000000000000000000000000000000000000001685 241.0
DYD2_k127_2770591_4 PFAM response regulator receiver - - - 0.00000000000000000000000000000000000008932 146.0
DYD2_k127_2770591_5 Anti-sigma-28 factor, FlgM K02398 - - 0.000008844 51.0
DYD2_k127_2770591_6 FlgN protein K02399 - - 0.0002382 50.0
DYD2_k127_2770591_7 Belongs to the ParA family K04562 - - 0.0004875 51.0
DYD2_k127_279574_0 Domain of unknown function (DUF1929) - - - 3.119e-219 704.0
DYD2_k127_279574_1 Catalyzes the attachment of tyrosine to tRNA(Tyr) in a two-step reaction tyrosine is first activated by ATP to form Tyr- AMP and then transferred to the acceptor end of tRNA(Tyr) K01866 - 6.1.1.1 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009882 507.0
DYD2_k127_279574_10 Belongs to the ompA family K03640 - - 0.00000000000000000000000000000000000000000000000000000000000001778 219.0
DYD2_k127_279574_11 Mediates coordination of peptidoglycan synthesis and outer membrane constriction during cell division - - - 0.000000000000000000000000000000000000000000000000004739 190.0
DYD2_k127_279574_12 TonB C terminal K03646 - - 0.000000000000000000000000000000000000002014 160.0
DYD2_k127_279574_13 Pfam Biopolymer transport protein ExbD TolR K03560 - - 0.0000000000000000000000000001148 119.0
DYD2_k127_279574_14 PAS fold - - - 0.00000000000000000526 98.0
DYD2_k127_279574_15 COG2197 Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain - - - 0.0000000000000001041 89.0
DYD2_k127_279574_16 - - - - 0.00000000003437 74.0
DYD2_k127_279574_2 Involved in the TonB-independent uptake of proteins K03641 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000248 485.0
DYD2_k127_279574_3 Sulphur transport K07112 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006269 404.0
DYD2_k127_279574_4 UbiA prenyltransferase family - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001309 402.0
DYD2_k127_279574_5 Dolichyl-phosphate-mannose-protein mannosyltransferase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002702 386.0
DYD2_k127_279574_6 Peptidase family M23 - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000123 359.0
DYD2_k127_279574_7 PFAM MotA TolQ ExbB proton channel K03562 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000004607 299.0
DYD2_k127_279574_8 Catalyzes the specific phosphorylation of 1,6-anhydro-N- acetylmuramic acid (anhMurNAc) with the simultaneous cleavage of the 1,6-anhydro ring, generating MurNAc-6-P. Is required for the utilization of anhMurNAc either imported from the medium or derived from its own cell wall murein, and thus plays a role in cell wall recycling K09001 - 2.7.1.170 0.000000000000000000000000000000000000000000000000000000000000000000000000000000009448 283.0
DYD2_k127_279574_9 transcriptional regulator K22105 - - 0.0000000000000000000000000000000000000000000000000000000000000000002583 236.0
DYD2_k127_2850239_0 Belongs to the binding-protein-dependent transport system permease family K01998 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003129 362.0
DYD2_k127_2850239_1 ABC transporter - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003127 311.0
DYD2_k127_2850239_2 LD-carboxypeptidase K01297 - 3.4.17.13 0.000000000000000000000000000000000000000000000000000000000001221 223.0
DYD2_k127_2850239_3 Catalyzes the deamination of adenosine to inosine at the wobble position 34 of tRNA(Arg2) K11991 GO:0002097,GO:0002100,GO:0003674,GO:0003824,GO:0004000,GO:0005488,GO:0006139,GO:0006382,GO:0006396,GO:0006399,GO:0006400,GO:0006725,GO:0006807,GO:0008033,GO:0008150,GO:0008152,GO:0008251,GO:0008270,GO:0009451,GO:0009987,GO:0010467,GO:0016070,GO:0016553,GO:0016787,GO:0016810,GO:0016814,GO:0019239,GO:0034470,GO:0034641,GO:0034660,GO:0043167,GO:0043169,GO:0043170,GO:0043412,GO:0044237,GO:0044238,GO:0046483,GO:0046872,GO:0046914,GO:0052717,GO:0071704,GO:0090304,GO:1901360 3.5.4.33 0.00000000000000000000000000000000001175 147.0
DYD2_k127_2863445_0 May be involved in recombinational repair of damaged DNA K03631 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000144 471.0
DYD2_k127_2863445_1 Negative regulator of class I heat shock genes (grpE- dnaK-dnaJ and groELS operons). Prevents heat-shock induction of these operons K03705 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003259 421.0
DYD2_k127_2863445_2 Catalyzes the conversion of 4-hydroxy- tetrahydrodipicolinate (HTPA) to tetrahydrodipicolinate K00215 - 1.17.1.8 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009691 363.0
DYD2_k127_2863445_3 Catalyzes the ferrous insertion into protoporphyrin IX K01772 - 4.99.1.1,4.99.1.9 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002784 308.0
DYD2_k127_2863445_4 Involved in the regulation of the intracellular balance of NAD and NADP, and is a key enzyme in the biosynthesis of NADP. Catalyzes specifically the phosphorylation on 2'-hydroxyl of the adenosine moiety of NAD to yield NADP K00858 - 2.7.1.23 0.000000000000000000000000000000000000000000000000000000000000000000000000000007438 275.0
DYD2_k127_2863445_5 Belongs to the Fur family K03711 - - 0.0000000000000000000000000000000000000000000000000000000000000003446 225.0
DYD2_k127_2863445_6 Catalyzes the ferrous insertion into protoporphyrin IX K01772 - 4.99.1.1,4.99.1.9 0.000000000000000000000000000000004856 130.0
DYD2_k127_2863445_7 Part of the outer membrane protein assembly complex, which is involved in assembly and insertion of beta-barrel proteins into the outer membrane K06186 - - 0.00000000000000000000000001367 115.0
DYD2_k127_2863445_8 Activator of cell division through the inhibition of FtsZ GTPase activity, therefore promoting FtsZ assembly into bundles of protofilaments necessary for the formation of the division Z ring. It is recruited early at mid-cell but it is not essential for cell division K09888 - - 0.0000000000000000001446 92.0
DYD2_k127_2867360_0 Belongs to the thiolase family K00626 - 2.3.1.9 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007719 556.0
DYD2_k127_2867360_1 Couples transcription and DNA repair by recognizing RNA polymerase (RNAP) stalled at DNA lesions. Mediates ATP-dependent release of RNAP and its truncated transcript from the DNA, and recruitment of nucleotide excision repair machinery to the damaged site K03723 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001061 342.0
DYD2_k127_2867360_2 phosphoserine phosphatase K01079 - 3.1.3.3 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000005373 296.0
DYD2_k127_2867360_3 beta-lactamase activity K07126 - - 0.00000183 59.0
DYD2_k127_286801_0 Glycosyl transferase family 21 K11936 - - 1.819e-287 905.0
DYD2_k127_286801_1 mutations in this gene affect RecA-independent excision of transposons and affects Mu bacteriophage growth K15738 - - 1.124e-205 661.0
DYD2_k127_286801_10 cellulose synthase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000226 312.0
DYD2_k127_286801_11 response regulator K07315 - 3.1.3.3 0.0000000000000000000000000000000000000000000000000000000000000000000000000005578 287.0
DYD2_k127_286801_12 cellulose synthase operon C domain protein K20543 - - 0.00000000000000000000000000000000000000000000000000000000003776 232.0
DYD2_k127_286801_13 AI-2E family transporter - - - 0.00000000000000000000000000000000000000000000002042 185.0
DYD2_k127_286801_14 Thioesterase-like superfamily K07107 - - 0.0000000000000000000000000000000001373 139.0
DYD2_k127_286801_15 Nuclease-like protein - - - 0.000000000000000000000000000004745 127.0
DYD2_k127_286801_16 diguanylate cyclase - - - 0.000000000000000000000008053 119.0
DYD2_k127_286801_17 NUDIX domain - - - 0.000000000000000000008298 105.0
DYD2_k127_286801_18 Belongs to the anti-sigma-factor antagonist family - - - 0.00000008049 58.0
DYD2_k127_286801_19 PFAM CobQ CobB MinD ParA nucleotide binding domain K03496 - - 0.00008589 53.0
DYD2_k127_286801_2 Protein of unknown function (DUF1298) K00635 - 2.3.1.20 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002292 529.0
DYD2_k127_286801_3 cellulose synthase K20541 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005189 508.0
DYD2_k127_286801_4 phospholipase K01058 - 3.1.1.32,3.1.1.4 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001103 372.0
DYD2_k127_286801_5 Belongs to the enoyl-CoA hydratase isomerase family - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001507 331.0
DYD2_k127_286801_6 protein pa0830 SWALL Q9I5A9 (EMBL AE004517) (277 aa) fasta scores E() K07044 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002161 312.0
DYD2_k127_286801_7 PFAM glycoside hydrolase family 8 K01179,K20542 - 3.2.1.4 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004657 314.0
DYD2_k127_286801_8 regulatory protein (MerR) - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001961 306.0
DYD2_k127_286801_9 Peptidoglycan polymerase that is essential for cell wall elongation K05837 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003414 300.0
DYD2_k127_2868838_0 Creatinase/Prolidase N-terminal domain K01271 - 3.4.13.9 3.134e-226 705.0
DYD2_k127_2868838_1 Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family K00836 - 2.6.1.76 1.544e-212 666.0
DYD2_k127_2868838_2 PFAM Aldehyde dehydrogenase K00135 - 1.2.1.16,1.2.1.20,1.2.1.79 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000509 622.0
DYD2_k127_2868838_3 PFAM Peptidase family M20 M25 M40 K01436 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005791 544.0
DYD2_k127_2868838_4 Belongs to the UPF0178 family K09768 - - 0.00000000000000000000000000000000000000000000000000000000000006269 216.0
DYD2_k127_2868838_5 ethyl tert-butyl ether degradation - - - 0.00000000000000000000000000000000000001039 147.0
DYD2_k127_2878965_0 Part of the ABC transporter complex CysAWTP involved in sulfate thiosulfate import. Responsible for energy coupling to the transport system K02045 - 3.6.3.25 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002095 544.0
DYD2_k127_2878965_1 COG1613 ABC-type sulfate transport system, periplasmic component K02048 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004525 531.0
DYD2_k127_2878965_2 Sulfate ABC transporter inner membrane subunit CysW K02047 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001947 450.0
DYD2_k127_2878965_3 Sulfate ABC transporter inner membrane subunit CysT K02046 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001709 439.0
DYD2_k127_2878965_4 Transcriptional regulator K13635 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000002546 276.0
DYD2_k127_2878965_5 EamA-like transporter family - - - 0.0000000000000000005871 87.0
DYD2_k127_2882406_0 A predicted alpha-helical domain with a conserved ER motif. - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000572 384.0
DYD2_k127_2882406_1 Transglutaminase-like enzymes - - - 0.0000000000000000000000000000000000000000000000000000000000000002046 229.0
DYD2_k127_2882406_2 Transglycosylase SLT domain protein - - - 0.0000007529 52.0
DYD2_k127_2901755_0 DNA-dependent ATPase involved in processing of recombination intermediates, plays a role in repairing DNA breaks. Stimulates the branch migration of RecA-mediated strand transfer reactions, allowing the 3' invading strand to extend heteroduplex DNA faster. Binds ssDNA in the presence of ADP but not other nucleotides, has ATPase activity that is stimulated by ssDNA and various branched DNA structures, but inhibited by SSB. Does not have RecA's homology-searching function K04485 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003132 581.0
DYD2_k127_2901755_1 Catalyzes the interconversion of L-alanine and D- alanine. May also act on other amino acids K01775 - 5.1.1.1 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000021 329.0
DYD2_k127_2906471_0 MotA/TolQ/ExbB proton channel family K03561 GO:0005575,GO:0005623,GO:0005886,GO:0005887,GO:0006810,GO:0008104,GO:0008150,GO:0015031,GO:0015833,GO:0016020,GO:0016021,GO:0017038,GO:0031224,GO:0031226,GO:0033036,GO:0042886,GO:0044425,GO:0044459,GO:0044464,GO:0045184,GO:0051179,GO:0051234,GO:0071702,GO:0071705,GO:0071944 - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006185 342.0
DYD2_k127_2906471_1 PFAM helix-turn-helix protein RpiR K19337 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006663 319.0
DYD2_k127_2906471_2 Belongs to the GPI family K01810 GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0044424,GO:0044464 5.3.1.9 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000012 315.0
DYD2_k127_2906471_3 SMP-30 Gluconolaconase K13874,K14274 - 3.1.1.15 0.00000000000000000000000000000000000000000001057 175.0
DYD2_k127_2906471_4 Biopolymer transport protein ExbD/TolR K03559 - - 0.0000000000000000000000000000000000000000001455 162.0
DYD2_k127_2906471_5 Interacts with outer membrane receptor proteins that carry out high-affinity binding and energy dependent uptake into the periplasmic space of specific substrates. It could act to transduce energy from the cytoplasmic membrane to specific energy- requiring processes in the outer membrane, resulting in the release into the periplasm of ligands bound by these outer membrane proteins K03832 - - 0.0000000000000000000000000000000000000000002288 165.0
DYD2_k127_2906471_6 His Kinase A (phosphoacceptor) domain - - - 0.000000000000000000000000000000008945 136.0
DYD2_k127_2909837_0 One of the essential components for the initiation of protein synthesis. Protects formylmethionyl-tRNA from spontaneous hydrolysis and promotes its binding to the 30S ribosomal subunits. Also involved in the hydrolysis of GTP during the formation of the 70S ribosomal complex K02519 - - 0.0 1074.0
DYD2_k127_2909837_1 GTP-binding protein K06207 - - 3.242e-299 924.0
DYD2_k127_2909837_2 Responsible for synthesis of pseudouridine from uracil- 55 in the psi GC loop of transfer RNAs K03177 - 5.4.99.25 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000003754 305.0
DYD2_k127_2909837_3 One of several proteins that assist in the late maturation steps of the functional core of the 30S ribosomal subunit. Associates with free 30S ribosomal subunits (but not with 30S subunits that are part of 70S ribosomes or polysomes). Required for efficient processing of 16S rRNA. May interact with the 5'-terminal helix region of 16S rRNA K02834 - - 0.000000000000000000000000000000000000002577 150.0
DYD2_k127_2914601_0 Involved in the heme biosynthesis. Catalyzes the aerobic oxidative decarboxylation of propionate groups of rings A and B of coproporphyrinogen-III to yield the vinyl groups in protoporphyrinogen-IX K00228 GO:0003674,GO:0005488,GO:0005515,GO:0042802,GO:0042803,GO:0046983 1.3.3.3 0.00000000000000000000000000000000000000000000000000000000000000000005706 231.0
DYD2_k127_2914601_1 Functions as a ribosomal silencing factor. Interacts with ribosomal protein L14 (rplN), blocking formation of intersubunit bridge B8. Prevents association of the 30S and 50S ribosomal subunits and the formation of functional ribosomes, thus repressing translation K09710 - - 0.0000000000000000000000000000000000000000000000000002684 188.0
DYD2_k127_2914601_2 Specifically methylates the pseudouridine at position 1915 (m3Psi1915) in 23S rRNA K00783 - 2.1.1.177 0.00000000000000000000000000000000000008556 146.0
DYD2_k127_2914601_3 Catalyzes the reversible adenylation of nicotinate mononucleotide (NaMN) to nicotinic acid adenine dinucleotide (NaAD) K00969 GO:0000309,GO:0003674,GO:0003824,GO:0004515,GO:0006082,GO:0006139,GO:0006520,GO:0006531,GO:0006725,GO:0006732,GO:0006733,GO:0006753,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009066,GO:0009108,GO:0009117,GO:0009165,GO:0009435,GO:0009987,GO:0016740,GO:0016772,GO:0016779,GO:0018130,GO:0019355,GO:0019359,GO:0019362,GO:0019363,GO:0019438,GO:0019637,GO:0019674,GO:0019752,GO:0034627,GO:0034628,GO:0034641,GO:0034654,GO:0040007,GO:0043436,GO:0043648,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0046483,GO:0046496,GO:0051186,GO:0051188,GO:0055086,GO:0070566,GO:0071704,GO:0072524,GO:0072525,GO:0090407,GO:1901293,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576,GO:1901605 2.7.7.18 0.00000000000000000000000000000001343 134.0
DYD2_k127_2916836_0 LysR substrate binding domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000003504 291.0
DYD2_k127_2916836_1 Belongs to the pirin family K06911 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000005297 269.0
DYD2_k127_2916836_2 Catalyzes the tRNA-independent activation of glutamate in presence of ATP and the subsequent transfer of glutamate onto a tRNA(Asp). Glutamate is transferred on the 2-amino-5-(4,5- dihydroxy-2-cyclopenten-1-yl) moiety of the queuosine in the wobble position of the QUC anticodon K01894 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000003163 255.0
DYD2_k127_2916836_3 Catalyzes the synthesis of 5,6-dihydrouridine (D), a modified base found in the D-loop of most tRNAs, via the reduction of the C5-C6 double bond in target uridines. Specifically modifies U20 and U20a in tRNAs K05539 - - 0.0000000001717 63.0
DYD2_k127_2939822_0 acetyl-coa hydrolase - - - 2.178e-258 815.0
DYD2_k127_2939822_1 Predicted metal-dependent hydrolase K07044 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000103 430.0
DYD2_k127_2939822_2 Efflux transporter, outer membrane factor lipoprotein, NodT family K18139 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000008163 269.0
DYD2_k127_2939822_3 Domain of unknown function (DUF1508) K09946 - - 0.0000000000000000000000000000000000000000006428 160.0
DYD2_k127_2939822_4 - - - - 0.00008545 51.0
DYD2_k127_2950902_0 Protein of unknown function (DUF1329) - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002913 548.0
DYD2_k127_2950902_1 - - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006459 422.0
DYD2_k127_2950902_2 Belongs to the DNA photolyase family K01669 - 4.1.99.3 0.0000000000000000000000000000000000000000000000000000000004136 209.0
DYD2_k127_2950902_3 YaeQ family - - - 0.00000000000000000000000000000000000000000000003309 173.0
DYD2_k127_2957606_0 argininosuccinate lyase K01755 - 4.3.2.1 3.348e-221 695.0
DYD2_k127_2957606_1 Catalyzes the ATP-dependent amidation of deamido-NAD to form NAD. Uses L-glutamine as a nitrogen source K01916,K01950 - 6.3.1.5,6.3.5.1 1.786e-208 661.0
DYD2_k127_2957606_10 Histidine kinase - - - 0.0000000000008742 76.0
DYD2_k127_2957606_11 PFAM HemY domain protein K02498 - - 0.0000003616 62.0
DYD2_k127_2957606_12 Uroporphyrinogen-III synthase HemD K01719 - 4.2.1.75 0.000001884 61.0
DYD2_k127_2957606_2 COG4664 TRAP-type mannitol chloroaromatic compound transport system, large permease component - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004658 573.0
DYD2_k127_2957606_3 Tetrapolymerization of the monopyrrole PBG into the hydroxymethylbilane pre-uroporphyrinogen in several discrete steps K01749 - 2.5.1.61 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008411 353.0
DYD2_k127_2957606_4 protein conserved in bacteria K09919 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001869 349.0
DYD2_k127_2957606_5 Catalyzes the hydrolysis of inorganic pyrophosphate (PPi) forming two phosphate ions K01507 - 3.6.1.1 0.000000000000000000000000000000000000000000000000000000000000000000000000008018 254.0
DYD2_k127_2957606_6 TRAP-type mannitol chloroaromatic compound transport system, small permease component - - - 0.000000000000000000000000000000000000000000000000000001181 196.0
DYD2_k127_2957606_7 Belongs to the P(II) protein family K04751 - - 0.00000000000000000000000000000000000000000000000000003084 191.0
DYD2_k127_2957606_8 HemX, putative uroporphyrinogen-III C-methyltransferase K02496,K13543 - 2.1.1.107,4.2.1.75 0.00000000000000000000000000000000000003805 164.0
DYD2_k127_2957606_9 Alpha/beta hydrolase family - - - 0.000000000000000000000000000007551 122.0
DYD2_k127_2959948_0 Di-haem oxidoreductase, putative peroxidase - - - 1.311e-209 658.0
DYD2_k127_2959948_1 Protein of unknown function (DUF1513) K09947 - - 0.0000000000000000000000000000000000000000000000000000008861 203.0
DYD2_k127_2959948_2 Imelysin K07338 - - 0.0000000000000000000000000000000000000000000000001319 190.0
DYD2_k127_2974379_0 Deoxyribodipyrimidine photo-lyase-related protein K06876 - - 6.439e-195 619.0
DYD2_k127_2974379_1 Glutathione S-transferase K07393 - 1.8.5.7 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001223 528.0
DYD2_k127_2974379_2 Catalyzes the addition and repair of the essential 3'- terminal CCA sequence in tRNAs without using a nucleic acid template. Adds these three nucleotides in the order of C, C, and A to the tRNA nucleotide-73, using CTP and ATP as substrates and producing inorganic pyrophosphate K00974 GO:0001680,GO:0003674,GO:0003824,GO:0004652,GO:0004810,GO:0006139,GO:0006396,GO:0006399,GO:0006725,GO:0006807,GO:0008033,GO:0008150,GO:0008152,GO:0009987,GO:0010467,GO:0016070,GO:0016437,GO:0016740,GO:0016772,GO:0016779,GO:0031123,GO:0034470,GO:0034641,GO:0034660,GO:0042245,GO:0042780,GO:0043170,GO:0043628,GO:0044237,GO:0044238,GO:0046483,GO:0070566,GO:0070567,GO:0071704,GO:0090304,GO:0140098,GO:0140101,GO:1901360,GO:1990817 2.7.7.72 0.000000000000000000000001205 105.0
DYD2_k127_2974379_3 Catalyzes the addition and repair of the essential 3'- terminal CCA sequence in tRNAs without using a nucleic acid template. Adds these three nucleotides in the order of C, C, and A to the tRNA nucleotide-73, using CTP and ATP as substrates and producing inorganic pyrophosphate. Also shows phosphatase, 2'- nucleotidase and 2',3'-cyclic phosphodiesterase activities. These phosphohydrolase activities are probably involved in the repair of the tRNA 3'-CCA terminus degraded by intracellular RNases K00974 - 2.7.7.72 0.0000000000000000000003074 96.0
DYD2_k127_2979391_0 Belongs to the UDP-glucose GDP-mannose dehydrogenase family K00012 - 1.1.1.22 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001245 550.0
DYD2_k127_2979391_1 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal K16872 - 2.3.1.207 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005765 529.0
DYD2_k127_2979391_2 Glutathione S-transferase, N-terminal domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002671 310.0
DYD2_k127_2979391_3 Alpha beta hydrolase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000002586 254.0
DYD2_k127_2979391_4 Histidine Phosphotransfer domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000002538 263.0
DYD2_k127_2979391_5 Acts as a magnesium transporter - - - 0.000000000000000000000000000000000000000000000000000000000000001066 228.0
DYD2_k127_2979391_6 Catalyzes a trans-dehydration via an enolate intermediate K03786 - 4.2.1.10 0.0000000000000000000000000000000000000000000000000000000000001939 215.0
DYD2_k127_2979391_7 Histidine Phosphotransfer domain K07679 - 2.7.13.3 0.00000000000000000000000000000000000000000000397 184.0
DYD2_k127_2979391_8 Outer membrane efflux protein - - - 0.0000000000000000000000000000000000000004426 161.0
DYD2_k127_2979391_9 - - - - 0.00003019 51.0
DYD2_k127_3001784_0 Domain of unknown function DUF21 - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001208 437.0
DYD2_k127_3001784_1 Periplasmic binding protein K02016 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006568 420.0
DYD2_k127_3001784_2 alcohol dehydrogenase K12957 - - 0.0000000000000000000000000000000000000000000000000000000000000000000008152 239.0
DYD2_k127_3001784_3 Putative exonuclease, RdgC K03554 - - 0.00000000000000000000000000000000000000000000000000004615 191.0
DYD2_k127_3003120_0 symporter activity K03307,K14387 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008264 595.0
DYD2_k127_3003120_1 Is probably a protein kinase regulator of UbiI activity which is involved in aerobic coenzyme Q (ubiquinone) biosynthesis K03688 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002089 579.0
DYD2_k127_303348_0 Glycosyl transferase family group 2 - - - 0.0 1092.0
DYD2_k127_303348_1 ATP-grasp domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005762 496.0
DYD2_k127_303348_10 Belongs to the CDP-alcohol phosphatidyltransferase class-I family - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000002089 310.0
DYD2_k127_303348_11 Protein of unknown function, DUF547 - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000001831 285.0
DYD2_k127_303348_12 - - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000007689 266.0
DYD2_k127_303348_13 monooxygenase activity - - - 0.0000000000000000000000000000000000000000000000000000000000000000002895 235.0
DYD2_k127_303348_14 Glycosyl transferases group 1 - - - 0.00000000000000000000000000000000000000000000000000000000000000001065 232.0
DYD2_k127_303348_15 Putative member of DMT superfamily (DUF486) K09922 - - 0.000000000000000000000000000000000000000000000000000000001112 202.0
DYD2_k127_303348_2 Sodium/calcium exchanger protein K07301 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002704 487.0
DYD2_k127_303348_3 PFAM methyltransferase small - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003051 483.0
DYD2_k127_303348_4 TIGRFAM phosphonate ABC transporter, periplasmic phosphonate-binding protein K02044 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008577 430.0
DYD2_k127_303348_5 Histidine-specific methyltransferase, SAM-dependent - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005157 410.0
DYD2_k127_303348_6 binding-protein-dependent transport systems inner membrane component K02042 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002656 404.0
DYD2_k127_303348_7 Binding-protein-dependent transport system inner membrane component K02042 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000311 346.0
DYD2_k127_303348_8 Alpha/beta hydrolase family - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007293 343.0
DYD2_k127_303348_9 Part of the ABC transporter complex PhnCDE involved in phosphonates import. Responsible for energy coupling to the transport system K02041 - 3.6.3.28 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002646 331.0
DYD2_k127_3038636_0 Modifies, by uridylylation and deuridylylation, the PII regulatory proteins (GlnB and homologs), in response to the nitrogen status of the cell that GlnD senses through the glutamine level. Under low glutamine levels, catalyzes the conversion of the PII proteins and UTP to PII-UMP and PPi, while under higher glutamine levels, GlnD hydrolyzes PII-UMP to PII and UMP (deuridylylation). Thus, controls uridylylation state and activity of the PII proteins, and plays an important role in the regulation of nitrogen K00990 - 2.7.7.59 0.0 1032.0
DYD2_k127_3038636_1 Required for chromosome condensation and partitioning K03529 - - 3.205e-303 968.0
DYD2_k127_3038636_10 Belongs to the universal ribosomal protein uS2 family K02967 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003547 394.0
DYD2_k127_3038636_11 Catalyzes the condensation of isopentenyl diphosphate (IPP) with allylic pyrophosphates generating different type of terpenoids K00806 - 2.5.1.31 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006696 343.0
DYD2_k127_3038636_12 Purine nucleoside phosphorylase which is highly specific for 6-oxopurine nucleosides. Cleaves guanosine or inosine to respective bases and sugar-1-phosphate molecules. Involved in purine salvage K00772 - 2.4.2.28 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002171 309.0
DYD2_k127_3038636_13 Responsible for the release of ribosomes from messenger RNA at the termination of protein biosynthesis. May increase the efficiency of translation by recycling ribosomes from one round of translation to another K02838 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000005145 282.0
DYD2_k127_3038636_14 Catalyzes the NADPH-dependent reduction of 7-cyano-7- deazaguanine (preQ0) to 7-aminomethyl-7-deazaguanine (preQ1) K06879,K09457 GO:0003674,GO:0003824,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006139,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0008616,GO:0009058,GO:0009116,GO:0009119,GO:0009163,GO:0009987,GO:0016491,GO:0016645,GO:0016646,GO:0016651,GO:0016657,GO:0018130,GO:0019438,GO:0033739,GO:0034404,GO:0034641,GO:0034654,GO:0042455,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0044283,GO:0044424,GO:0044444,GO:0044464,GO:0046116,GO:0046483,GO:0055086,GO:0055114,GO:0071704,GO:1901135,GO:1901137,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576,GO:1901657,GO:1901659 1.7.1.13 0.0000000000000000000000000000000000000000000000000000000000000003954 222.0
DYD2_k127_3038636_15 Belongs to the CDS family K00981 - 2.7.7.41 0.000000000000000000000000000000000000000000000000000000005575 208.0
DYD2_k127_3038636_16 zinc metalloprotease K11749 - - 0.0000000000000000000000000000000000000000000000009379 183.0
DYD2_k127_3038636_17 Essential cell division protein that stabilizes the FtsZ protofilaments by cross-linking them and that serves as a cytoplasmic membrane anchor for the Z ring. Also required for the recruitment to the septal ring of downstream cell division proteins - - - 0.000000000000000000000000000001246 135.0
DYD2_k127_3038636_2 DNA ligase that catalyzes the formation of phosphodiester linkages between 5'-phosphoryl and 3'-hydroxyl groups in double-stranded DNA using NAD as a coenzyme and as the energy source for the reaction. It is essential for DNA replication and repair of damaged DNA K01972 - 6.5.1.2 5.105e-239 758.0
DYD2_k127_3038636_3 PFAM aminotransferase, class I and II K14267 - 2.6.1.17 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001241 468.0
DYD2_k127_3038636_4 TIGRFAM methionine aminopeptidase, type I K01265 - 3.4.11.18 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006491 451.0
DYD2_k127_3038636_5 UTP-glucose-1-phosphate uridylyltransferase K00963 - 2.7.7.9 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001108 432.0
DYD2_k127_3038636_6 Belongs to the transferase hexapeptide repeat family K00674 - 2.3.1.117 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002123 404.0
DYD2_k127_3038636_7 Associates with the EF-Tu.GDP complex and induces the exchange of GDP to GTP. It remains bound to the aminoacyl-tRNA.EF- Tu.GTP complex up to the GTP hydrolysis stage on the ribosome K02357 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001441 406.0
DYD2_k127_3038636_8 Catalyzes the reversible phosphorylation of UMP to UDP K09903 - 2.7.4.22 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004463 400.0
DYD2_k127_3038636_9 Catalyzes the NADP-dependent rearrangement and reduction of 1-deoxy-D-xylulose-5-phosphate (DXP) to 2-C-methyl-D-erythritol 4-phosphate (MEP) K00099 - 1.1.1.267 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004801 404.0
DYD2_k127_3055995_0 Peptide chain release factor 1 directs the termination of translation in response to the peptide chain termination codons UAG and UAA K02835 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006306 493.0
DYD2_k127_3055995_1 Catalyzes the NADPH-dependent reduction of glutamyl- tRNA(Glu) to glutamate 1-semialdehyde (GSA) K02492 - 1.2.1.70 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001453 478.0
DYD2_k127_3055995_2 Alkane 1-monooxygenase K00496,K10616,K15757 - 1.14.15.3 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006343 377.0
DYD2_k127_3055995_3 Oxidoreductase FAD-binding domain K00523,K00529,K02639,K16246 - 1.17.1.1,1.18.1.3 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004748 320.0
DYD2_k127_3055995_4 Transcriptional regulatory protein, C terminal - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000004525 277.0
DYD2_k127_3055995_5 Methylates the class 1 translation termination release factors RF1 PrfA and RF2 PrfB on the glutamine residue of the universally conserved GGQ motif K02493 - 2.1.1.297 0.0000000000000000000000000000000000000000000000000000000000000000211 233.0
DYD2_k127_3055995_6 Belongs to the glutaredoxin family. Monothiol subfamily K07390 - - 0.0000000000000000000000000000000000000000000007894 167.0
DYD2_k127_3055995_7 Bacterial regulatory proteins, tetR family - - - 0.0000000000000000000000000307 117.0
DYD2_k127_3055995_8 Flavin prenyltransferase that catalyzes the synthesis of the prenylated FMN cofactor (prenyl-FMN) for 4-hydroxy-3- polyprenylbenzoic acid decarboxylase UbiD. The prenyltransferase is metal-independent and links a dimethylallyl moiety from dimethylallyl monophosphate (DMAP) to the flavin N5 and C6 atoms of FMN K03186 - 2.5.1.129 0.00000000000000000000000003893 111.0
DYD2_k127_3079556_0 Rhodanese Homology Domain K07146 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000185 430.0
DYD2_k127_3079556_1 KR domain K00059 - 1.1.1.100 0.000000000000000000000000000000000000000000000000000000000000000000001945 246.0
DYD2_k127_3079556_2 Glutathione S-transferase, C-terminal domain - - - 0.00000000000000000000000000000000000000000000000000000000000002497 222.0
DYD2_k127_3079556_3 Transporter associated domain K03699 - - 0.0000000000000002119 82.0
DYD2_k127_3081887_0 Belongs to the monovalent cation proton antiporter 2 (CPA2) transporter (TC 2.A.37) family K03455 - - 1.422e-227 722.0
DYD2_k127_3081887_1 Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released K03092 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009783 430.0
DYD2_k127_3081887_10 Prokaryotic N-terminal methylation motif - - - 0.00000000000000006959 88.0
DYD2_k127_3081887_11 Prokaryotic N-terminal methylation motif - - - 0.000001025 60.0
DYD2_k127_3081887_12 Type II secretory pathway, component PulF K02653 - - 0.000006055 58.0
DYD2_k127_3081887_13 Lipopolysaccharide-assembly, LptC-related K11719 - - 0.0001459 51.0
DYD2_k127_3081887_2 Belongs to the SIS family. GutQ KpsF subfamily K06041 - 5.3.1.13 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001453 387.0
DYD2_k127_3081887_3 PFAM ABC transporter related K02065 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008827 356.0
DYD2_k127_3081887_4 Branched-chain amino acid ATP-binding cassette transporter K06861 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002972 340.0
DYD2_k127_3081887_5 Type II and III secretion system protein K02453 - - 0.000000000000000000000000000000000000000000000000000000000000000001867 251.0
DYD2_k127_3081887_6 General secretory system II protein E domain protein K02454,K02652 - - 0.0000000000000000000000000000000000000000000000000000000008148 214.0
DYD2_k127_3081887_7 ABC-type transport system involved in resistance to organic solvents permease component K02066 - - 0.0000000000000000000000000000000000000000000000000000215 191.0
DYD2_k127_3081887_8 haloacid dehalogenase-like hydrolase K03270 - 3.1.3.45 0.0000000000000000000000000000000000000000006594 162.0
DYD2_k127_3081887_9 Involved in the assembly of lipopolysaccharide (LPS). Required for the translocation of LPS from the inner membrane to the outer membrane K09774 - - 0.0000000000000000000000002 113.0
DYD2_k127_3089638_0 penicillin-binding protein 1A K05366 - 2.4.1.129,3.4.16.4 1.079e-246 782.0
DYD2_k127_3089638_1 cytochrome C - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001536 567.0
DYD2_k127_3089638_2 Specifically catalyzes the decarboxylation of meso- diaminopimelate (meso-DAP) to L-lysine K01586 - 4.1.1.20 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002357 483.0
DYD2_k127_3089638_3 ResB-like family K07399 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001393 425.0
DYD2_k127_3089638_4 type II and III secretion system protein K02666 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005623 378.0
DYD2_k127_3089638_5 3-dehydroquinate synthase K01735 - 4.2.3.4 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000228 277.0
DYD2_k127_3089638_6 Catalyzes the specific phosphorylation of the 3-hydroxyl group of shikimic acid using ATP as a cosubstrate K00891 - 2.7.1.71 0.000000000000000000000000000000000000000000000000000000805 198.0
DYD2_k127_3089638_7 Belongs to the frataxin family K06202 - - 0.00000000000000000000001465 104.0
DYD2_k127_3089638_8 Pilus assembly protein, PilO K02664 - - 0.0000000006864 68.0
DYD2_k127_3089638_9 Penicillin-binding protein OB-like domain K05366 - 2.4.1.129,3.4.16.4 0.000000006787 58.0
DYD2_k127_3091590_0 PFAM AMP-dependent synthetase and ligase K01897 - 6.2.1.3 2.309e-200 640.0
DYD2_k127_3091590_1 CoA-transferase family III - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001423 334.0
DYD2_k127_3091590_2 Belongs to the ompA family K03286 - - 0.00000000000000000001628 92.0
DYD2_k127_31185_0 Gp5 C-terminal repeat (3 copies) K11904 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009399 404.0
DYD2_k127_31185_1 Belongs to the peptidase M48B family K03799 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003383 372.0
DYD2_k127_31185_10 Belongs to the ompA family - - - 0.000000000005048 73.0
DYD2_k127_31185_11 Domain of unknown function (DUF4123) - - - 0.0001281 50.0
DYD2_k127_31185_2 haemagglutination activity domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000006718 319.0
DYD2_k127_31185_3 POTRA domain protein, ShlB-type - - - 0.000000000000000000000000000000000000000000000000000000000000000006044 246.0
DYD2_k127_31185_4 protein possibly involved in utilization of glycolate and propanediol K11477 - - 0.00000000000000000000000000000000000000000000000001693 182.0
DYD2_k127_31185_5 COG0791 Cell wall-associated hydrolases (invasion-associated proteins) K13694,K13695 - 3.4.17.13 0.000000000000000000000000000000000000000234 155.0
DYD2_k127_31185_6 SMART protein phosphatase 2C domain protein K20074 - 3.1.3.16 0.0000000000000000000000000000001441 134.0
DYD2_k127_31185_7 type VI secretion protein K11893 - - 0.000000000000000000000000002071 114.0
DYD2_k127_31185_8 Type VI secretion K07169,K11894,K11913 - - 0.00000000000000000000003418 112.0
DYD2_k127_31185_9 membrane - - - 0.00000000000000006911 84.0
DYD2_k127_3125290_0 PrkA AAA domain K07180 - - 0.0 1022.0
DYD2_k127_3125290_1 acyl-CoA dehydrogenase K00249,K06445 - 1.3.8.7 1.563e-317 992.0
DYD2_k127_3125290_2 Glycerol acyltransferase K05939 - 2.3.1.40,6.2.1.20 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007883 342.0
DYD2_k127_3125290_3 negative regulation of translational initiation - - - 0.000000000000000000000000000009202 124.0
DYD2_k127_3125290_4 Belongs to the UPF0229 family K09786 - - 0.0000000000000007036 79.0
DYD2_k127_3125307_0 Subunits I and II form the functional core of the enzyme complex. Electrons originating in cytochrome c are transferred via heme a and Cu(A) to the binuclear center formed by heme a3 and Cu(B) K02275 - 1.9.3.1 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003469 514.0
DYD2_k127_3125307_1 Cytochrome c oxidase is the component of the respiratory chain that catalyzes the reduction of oxygen to water. Subunits 1- 3 form the functional core of the enzyme complex. CO I is the catalytic subunit of the enzyme. Electrons originating in cytochrome c are transferred via the copper A center of subunit 2 and heme A of subunit 1 to the bimetallic center formed by heme A3 and copper B K02274 - 1.9.3.1 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007577 434.0
DYD2_k127_3125307_2 Converts the free carboxyl group of a malonyl-thioester to its methyl ester by transfer of a methyl group from S-adenosyl- L-methionine (SAM). It allows to synthesize pimeloyl-ACP via the fatty acid synthetic pathway K02169 - 2.1.1.197 0.000000000000000000000000000000000000007639 157.0
DYD2_k127_3125307_3 Methylates the ribose at the nucleotide 34 wobble position in the two leucyl isoacceptors tRNA(Leu)(CmAA) and tRNA(Leu)(cmnm5UmAA). Catalyzes the methyl transfer from S- adenosyl-L-methionine to the 2'-OH of the wobble nucleotide K03216 - 2.1.1.207 0.00000000000000000000000000000000000003926 143.0
DYD2_k127_3125307_4 Integral membrane protein (DUF2244) - - - 0.00000000000000000000000000000008285 130.0
DYD2_k127_3125307_5 Competence protein - GO:0006139,GO:0006259,GO:0006308,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0009056,GO:0009057,GO:0009987,GO:0015976,GO:0019439,GO:0034641,GO:0034655,GO:0043170,GO:0044237,GO:0044238,GO:0044248,GO:0044260,GO:0044265,GO:0044270,GO:0046483,GO:0046700,GO:0071704,GO:0090304,GO:1901360,GO:1901361,GO:1901575 - 0.0000000000000000000001694 108.0
DYD2_k127_313524_0 Cobalamin synthesis protein cobW C-terminal domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001722 453.0
DYD2_k127_313524_1 Metallo-beta-lactamase superfamily - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006736 316.0
DYD2_k127_313524_2 Catalyzes the isomerization of sedoheptulose 7-phosphate in D-glycero-D-manno-heptose 7-phosphate K03271 - 5.3.1.28 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000938 281.0
DYD2_k127_313524_3 Catalyzes the 2'-O-methylation of the ribose of cytidine 1402 (C1402) in 16S rRNA K07056 GO:0000154,GO:0000451,GO:0000453,GO:0001510,GO:0003674,GO:0003824,GO:0006139,GO:0006364,GO:0006396,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0008168,GO:0008171,GO:0008173,GO:0008649,GO:0008757,GO:0009451,GO:0009987,GO:0010467,GO:0016070,GO:0016072,GO:0016434,GO:0016740,GO:0016741,GO:0022613,GO:0031167,GO:0032259,GO:0034470,GO:0034641,GO:0034660,GO:0042254,GO:0043170,GO:0043412,GO:0043414,GO:0044085,GO:0044237,GO:0044238,GO:0044260,GO:0046483,GO:0070677,GO:0071704,GO:0071840,GO:0090304,GO:0140098,GO:0140102,GO:1901360 2.1.1.198 0.000000000000000000000000000000000000000000000000000000000000000000242 242.0
DYD2_k127_313524_4 Transcription factor that acts by binding directly to the RNA polymerase (RNAP). Required for negative regulation of rRNA expression and positive regulation of several amino acid biosynthesis promoters K06204 - - 0.00000000000000000000000000000000000000000000000000000000000000008239 224.0
DYD2_k127_313524_5 Redoxin domain protein - - - 0.0000000000000000000000000000000000000000000000000000000005401 205.0
DYD2_k127_313524_6 SMART Transport-associated and nodulation region - - - 0.00000000000000000000000000000000000000000000000000009025 194.0
DYD2_k127_313524_7 heat shock protein K04762 - - 0.000000000000000000000000000000000999 133.0
DYD2_k127_313524_8 Belongs to the UPF0102 family K07460 - - 0.00000000000000000000006807 105.0
DYD2_k127_3136605_0 Molybdenum cofactor synthesis domain protein K03750 - 2.10.1.1 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003287 499.0
DYD2_k127_3136605_1 HlyD family secretion protein K12542 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003468 354.0
DYD2_k127_3136605_2 Required for formate dehydrogenase (FDH) activity. Acts as a sulfur carrier protein that transfers sulfur from IscS to the molybdenum cofactor prior to its insertion into FDH K02379 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001993 343.0
DYD2_k127_3136605_3 Catalyzes the cyclization of GTP to (8S)-3',8-cyclo-7,8- dihydroguanosine 5'-triphosphate K03639 - 4.1.99.22 0.0000000000000000000000000000000000000000000000000000000000000000000000001966 250.0
DYD2_k127_3136605_4 COG2274 ABC-type bacteriocin lantibiotic exporters, contain an N-terminal double-glycine peptidase domain K12541 - - 0.000000000000000000000000000000000000000000000000000000000000000003034 251.0
DYD2_k127_3136605_5 TIGRFAM type I secretion outer membrane protein, TolC family K12543 - - 0.0000000000000000000000000000000000000000000000000000000000002405 236.0
DYD2_k127_3136605_6 Transfers a GMP moiety from GTP to Mo-molybdopterin (Mo- MPT) cofactor (Moco or molybdenum cofactor) to form Mo- molybdopterin guanine dinucleotide (Mo-MGD) cofactor K03752 - 2.7.7.77 0.0000000000000000000000000000000000000000000000000000007252 200.0
DYD2_k127_3136605_7 COG2931 RTX toxins and related Ca2 -binding proteins - - - 0.00000001209 67.0
DYD2_k127_3152971_0 alpha-glucosidase K01187 - 3.2.1.20 1.92e-221 692.0
DYD2_k127_3152971_1 Belongs to the bacterial glucokinase family K00845 GO:0003674,GO:0003824,GO:0004340,GO:0004396,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005975,GO:0006082,GO:0006090,GO:0006091,GO:0006096,GO:0006139,GO:0006163,GO:0006164,GO:0006165,GO:0006725,GO:0006732,GO:0006733,GO:0006753,GO:0006754,GO:0006757,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0009056,GO:0009058,GO:0009108,GO:0009117,GO:0009123,GO:0009124,GO:0009126,GO:0009127,GO:0009132,GO:0009135,GO:0009141,GO:0009142,GO:0009144,GO:0009145,GO:0009150,GO:0009152,GO:0009156,GO:0009161,GO:0009165,GO:0009166,GO:0009167,GO:0009168,GO:0009179,GO:0009185,GO:0009199,GO:0009201,GO:0009205,GO:0009206,GO:0009259,GO:0009260,GO:0009987,GO:0016052,GO:0016053,GO:0016301,GO:0016310,GO:0016740,GO:0016772,GO:0016773,GO:0017144,GO:0018130,GO:0019200,GO:0019359,GO:0019362,GO:0019363,GO:0019438,GO:0019439,GO:0019637,GO:0019693,GO:0019752,GO:0032787,GO:0034404,GO:0034641,GO:0034654,GO:0034655,GO:0042866,GO:0043436,GO:0044237,GO:0044238,GO:0044248,GO:0044249,GO:0044262,GO:0044270,GO:0044271,GO:0044281,GO:0044283,GO:0044424,GO:0044444,GO:0044464,GO:0046031,GO:0046034,GO:0046390,GO:0046394,GO:0046434,GO:0046483,GO:0046496,GO:0046700,GO:0046835,GO:0046939,GO:0051156,GO:0051186,GO:0051188,GO:0055086,GO:0071704,GO:0072330,GO:0072521,GO:0072522,GO:0072524,GO:0072525,GO:0090407,GO:1901135,GO:1901137,GO:1901292,GO:1901293,GO:1901360,GO:1901361,GO:1901362,GO:1901564,GO:1901566,GO:1901575,GO:1901576 2.7.1.2 0.0000000000000000000000000000000000000000000000003227 181.0
DYD2_k127_3166439_0 B12 binding domain K22491 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004378 336.0
DYD2_k127_3166439_1 Converts GTP to 7,8-dihydroneopterin triphosphate K09007 - 3.5.4.16 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000256 327.0
DYD2_k127_3166439_2 Flavin containing amine oxidoreductase K06954 - - 0.00000000000000000000000000000000000000000000000003444 183.0
DYD2_k127_3166439_3 Belongs to the glutathione peroxidase family K00432 - 1.11.1.9 0.00000000000000000000001696 105.0
DYD2_k127_3166439_4 Protein conserved in bacteria - - - 0.00000000000000000006787 89.0
DYD2_k127_3166439_5 Deoxyribodipyrimidine photo-lyase-related protein K06876 - - 0.00000000000000008377 83.0
DYD2_k127_3176151_0 - - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000395 415.0
DYD2_k127_3176151_1 - - - - 0.0000000000000000000000007858 108.0
DYD2_k127_3176151_3 - - - - 0.0001879 47.0
DYD2_k127_3187244_0 cytochrome bd ubiquinol oxidase subunit I K00425 - 1.10.3.14 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000116 592.0
DYD2_k127_3187244_1 cytochrome d ubiquinol oxidase, subunit II K00426 - 1.10.3.14 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006271 427.0
DYD2_k127_3187244_10 Provides the (R)-glutamate required for cell wall biosynthesis K01776 - 5.1.1.3 0.00000000000000000000000000000000000000000000000000000000000000001005 233.0
DYD2_k127_3187244_11 esterase K01432 - 3.5.1.9 0.00000000000000000000000000000000000000000000000000000000000000003299 234.0
DYD2_k127_3187244_12 semialdehyde reductase K00020,K00042 - 1.1.1.31,1.1.1.60 0.00000000000000000000000000000000000000000000000000000004514 207.0
DYD2_k127_3187244_13 translation initiation inhibitor, yjgF family - - - 0.0000000000000000000000000000000000000324 147.0
DYD2_k127_3187244_14 Domain of unknown function (DUF1857) - - - 0.0000000000000000000000000007397 123.0
DYD2_k127_3187244_15 Histidine kinase K20974 - 2.7.13.3 0.000000000000000000000001243 113.0
DYD2_k127_3187244_16 Putative phosphatase (DUF442) - - - 0.0000000000000000000000293 103.0
DYD2_k127_3187244_2 LysR substrate binding domain K13634 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001175 386.0
DYD2_k127_3187244_3 Chaperone involved in the correct folding and assembly of outer membrane proteins. Recognizes specific patterns of aromatic residues and the orientation of their side chains, which are found more frequently in integral outer membrane proteins. May act in both early periplasmic and late outer membrane-associated steps of protein maturation K03771 - 5.2.1.8 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000077 349.0
DYD2_k127_3187244_4 Catalyzes the NAD(P)-dependent oxidation of 4- (phosphohydroxy)-L-threonine (HTP) into 2-amino-3-oxo-4- (phosphohydroxy)butyric acid which spontaneously decarboxylates to form 3-amino-2-oxopropyl phosphate (AHAP) K00097 - 1.1.1.262 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000373 342.0
DYD2_k127_3187244_5 Organic solvent tolerance protein K04744 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004624 338.0
DYD2_k127_3187244_6 membrane transporter protein K07090 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000003632 293.0
DYD2_k127_3187244_7 Sulfite reductase K00381 - 1.8.1.2 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000003839 286.0
DYD2_k127_3187244_8 Drug resistance transporter Bcr CflA subfamily K07552 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000004268 299.0
DYD2_k127_3187244_9 Specifically dimethylates two adjacent adenosines (A1518 and A1519) in the loop of a conserved hairpin near the 3'-end of 16S rRNA in the 30S particle. May play a critical role in biogenesis of 30S subunits K02528 - 2.1.1.182 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000001911 284.0
DYD2_k127_3203552_0 Reversibly transfers an adenylyl group from ATP to 4'- phosphopantetheine, yielding dephospho-CoA (dPCoA) and pyrophosphate K00954 - 2.7.7.3 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000584 284.0
DYD2_k127_3203552_1 Methyltransferase K08316 - 2.1.1.171 0.0000000000000000000000000000000000000000275 159.0
DYD2_k127_3203552_2 PFAM 4Fe-4S ferredoxin iron-sulfur binding domain protein - - - 0.0000000000000000000000000000000000000001446 153.0
DYD2_k127_3203552_3 Peptidase M16 K07263 - - 0.00000000000000000000000000008603 117.0
DYD2_k127_3213464_0 Endonuclease that specifically degrades the RNA of RNA- DNA hybrids - - - 0.000000000000000000000000000000000000000000000000000001483 198.0
DYD2_k127_3213464_1 Psort location Cytoplasmic, score 8.96 K03437 - - 0.000000000000000000000000000000000000000000000000003245 193.0
DYD2_k127_3213464_2 Condensation of UDP-2,3-diacylglucosamine and 2,3- diacylglucosamine-1-phosphate to form lipid A disaccharide, a precursor of lipid A, a phosphorylated glycolipid that anchors the lipopolysaccharide to the outer membrane of the cell K00748 - 2.4.1.182 0.000000000000000000000000000000000000000000000000313 183.0
DYD2_k127_3213464_3 DNA photolyase K01669 - 4.1.99.3 0.000000000000000000000000000009395 123.0
DYD2_k127_3224508_0 Converts heme B (protoheme IX) to heme O by substitution of the vinyl group on carbon 2 of heme B porphyrin ring with a hydroxyethyl farnesyl side group K02257 - 2.5.1.141 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002767 409.0
DYD2_k127_3224508_1 Glutathione S-transferase, C-terminal domain K00799 - 2.5.1.18 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000007712 286.0
DYD2_k127_3224508_2 Electron transport protein SCO1 SenC K07152 - - 0.0000000000000000000000000000000000000000000000000001128 198.0
DYD2_k127_3224508_3 RNA polymerase sigma factor, sigma-70 family K03089 - - 0.00000000000000000000000000000000000000000000002695 175.0
DYD2_k127_3224508_4 cytochrome oxidase assembly K02259 - - 0.000000000000000000000000006107 113.0
DYD2_k127_32298_0 Belongs to the 'phage' integrase family - - - 0.00000000000000000000000000000000000000000000000000000000000003772 223.0
DYD2_k127_32298_2 Domain of unknown function (DUF4224) - - - 0.0003196 46.0
DYD2_k127_3234142_0 Protein of unknown function - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001339 496.0
DYD2_k127_3234142_1 PFAM Nitrilase cyanide hydratase and apolipoprotein N-acyltransferase K01501,K11206 - 3.5.5.1 0.000000000000000000000000000001036 123.0
DYD2_k127_3235906_0 TonB-dependent siderophore receptor K02014 - - 2.005e-253 799.0
DYD2_k127_3235906_1 Domain of unknown function (DUF4143) K07133 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003928 469.0
DYD2_k127_3235906_2 Catalyzes the formation of dTDP-glucose, from dTTP and glucose 1-phosphate, as well as its pyrophosphorolysis K00973 - 2.7.7.24 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002299 408.0
DYD2_k127_3235906_3 Catalyzes the epimerization of the C3' and C5'positions of dTDP-6-deoxy-D-xylo-4-hexulose, forming dTDP-6-deoxy-L-lyxo-4- hexulose K01790 GO:0000271,GO:0003674,GO:0003824,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005975,GO:0005976,GO:0006629,GO:0006950,GO:0006974,GO:0008150,GO:0008152,GO:0008610,GO:0008653,GO:0008830,GO:0009058,GO:0009059,GO:0009103,GO:0009314,GO:0009411,GO:0009416,GO:0009628,GO:0009987,GO:0016051,GO:0016853,GO:0016854,GO:0016857,GO:0033554,GO:0033692,GO:0034637,GO:0034645,GO:0042221,GO:0043170,GO:0044237,GO:0044238,GO:0044249,GO:0044255,GO:0044260,GO:0044262,GO:0044264,GO:0044424,GO:0044444,GO:0044464,GO:0045226,GO:0046379,GO:0046677,GO:0050896,GO:0051716,GO:0071704,GO:1901135,GO:1901137,GO:1901576,GO:1903509 5.1.3.13 0.0000000000000000000000000000000000000000000000000000000000000185 219.0
DYD2_k127_3235906_4 Belongs to the NAD(P)-dependent epimerase dehydratase family. dTDP-glucose dehydratase subfamily K01710 - 4.2.1.46 0.00000000000000000000000000000000000000000000000000009489 189.0
DYD2_k127_3235906_5 Enhances distal genes transcription elongation in a specialized subset of operons that encode extracytoplasmic components K05785 - - 0.000000000000000000000000000000000008683 141.0
DYD2_k127_3235906_6 response regulator K03413 - - 0.000000000000000000009116 96.0
DYD2_k127_32389_0 ABC transporter, transmembrane region K06147 - - 1.266e-273 850.0
DYD2_k127_32389_1 Putative nucleotidyltransferase substrate binding domain K07182 - - 9.449e-212 676.0
DYD2_k127_32389_10 thioesterase K07107 - - 0.000000000000000000000000000000000000000000000000001554 185.0
DYD2_k127_32389_11 alpha/beta hydrolase fold - - - 0.000000000000000000000000000000000000000006012 166.0
DYD2_k127_32389_12 Belongs to the UPF0225 family K09858 - - 0.000000000000000000000000000000000000000006433 157.0
DYD2_k127_32389_13 Domain of unknown function (DUF1854) - - - 0.0000000000000000000000000000000000002261 145.0
DYD2_k127_32389_14 Putative zinc- or iron-chelating domain K06940 - - 0.0000000000000000000000000000000002171 140.0
DYD2_k127_32389_15 Allophanate hydrolase subunit 1 - - - 0.0000000000000000000000000000000002418 140.0
DYD2_k127_32389_16 Domain of unknown function (DUF4442) - - - 0.0000000000000000000000000000008684 123.0
DYD2_k127_32389_17 Functions in complex with FlhC as a master transcriptional regulator that regulates transcription of several flagellar and non-flagellar operons by binding to their promoter region. Activates expression of class 2 flagellar genes, including fliA, which is a flagellum-specific sigma factor that turns on the class 3 genes. Also regulates genes whose products function in a variety of physiological pathways K02403 - - 0.000000000000000000000004461 105.0
DYD2_k127_32389_2 Catalyzes the transfer of selenium from selenophosphate for conversion of 2-thiouridine to 2-selenouridine at the wobble position in tRNA K06917 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006829 515.0
DYD2_k127_32389_3 Belongs to the amidase family K01426 - 3.5.1.4 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000271 478.0
DYD2_k127_32389_4 alcohol dehydrogenase K00001 - 1.1.1.1 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004379 411.0
DYD2_k127_32389_5 Functions in complex with FlhD as a master transcriptional regulator that regulates transcription of several flagellar and non-flagellar operons by binding to their promoter region. Activates expression of class 2 flagellar genes, including fliA, which is a flagellum-specific sigma factor that turns on the class 3 genes. Also regulates genes whose products function in a variety of physiological pathways K02402 - - 0.00000000000000000000000000000000000000000000000000000000000009157 218.0
DYD2_k127_32389_6 Belongs to the UPF0271 (lamB) family K07160 - - 0.000000000000000000000000000000000000000000000000000000000001684 217.0
DYD2_k127_32389_7 Exonuclease K02342 - 2.7.7.7 0.00000000000000000000000000000000000000000000000000005039 195.0
DYD2_k127_32389_8 Hsp20/alpha crystallin family K04080 - - 0.00000000000000000000000000000000000000000000000000007227 190.0
DYD2_k127_32389_9 allophanate hydrolase subunit 2 K01457,K01941 GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0044424,GO:0044444,GO:0044464 3.5.1.54,6.3.4.6 0.0000000000000000000000000000000000000000000000000006996 197.0
DYD2_k127_3244692_0 PHB de-polymerase C-terminus K05973 - 3.1.1.75 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001754 607.0
DYD2_k127_3244692_1 Part of the tripartite ATP-independent periplasmic (TRAP) transport system - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003937 416.0
DYD2_k127_3244692_2 Oxidoreductase NAD-binding domain K00528 - 1.18.1.2,1.19.1.1 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003083 304.0
DYD2_k127_3244692_3 Part of a membrane complex involved in electron transport K03616 - - 0.000000000000000000000000000000000000000000000000000000002835 204.0
DYD2_k127_3244692_4 Ferredoxins are iron-sulfur proteins that transfer electrons in a wide variety of metabolic reactions K05524 - - 0.000000000000000000000000000000000000000000000000000000003976 199.0
DYD2_k127_3244692_5 LUD domain K00782 - - 0.00000000000000000000000000000000000000000000000000005844 194.0
DYD2_k127_3244692_6 Nad-dependent epimerase dehydratase - - - 0.000000000000000000000000000000002249 131.0
DYD2_k127_3244692_7 Putative polyhydroxyalkanoic acid system protein (PHA_gran_rgn) - - - 0.000000000000000000255 90.0
DYD2_k127_3245063_0 Transfers and isomerizes the ribose moiety from AdoMet to the 7-aminomethyl group of 7-deazaguanine (preQ1-tRNA) to give epoxyqueuosine (oQ-tRNA) K07568 - 2.4.99.17 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006515 345.0
DYD2_k127_3245063_1 D-isomer specific 2-hydroxyacid dehydrogenase K00018 - 1.1.1.29 0.0000000000000000000000000000000000000000000000000000000000000000000000000005088 266.0
DYD2_k127_3245063_2 Belongs to the DEAD box helicase family K11927 GO:0003674,GO:0003724,GO:0003824,GO:0004004,GO:0004386,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0008026,GO:0008104,GO:0008150,GO:0008186,GO:0016462,GO:0016787,GO:0016817,GO:0016818,GO:0016887,GO:0017111,GO:0032991,GO:0033036,GO:0035770,GO:0036464,GO:0042623,GO:0043186,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0044424,GO:0044444,GO:0044464,GO:0045495,GO:0051179,GO:0060293,GO:0070035,GO:0140098,GO:1990904 3.6.4.13 0.0000000000000000000000000000000000000000000000000002924 187.0
DYD2_k127_3245063_3 Diguanylate cyclase - - - 0.0000000000000000000000000000004465 140.0
DYD2_k127_3245647_0 COG2355 Zn-dependent dipeptidase, microsomal dipeptidase homolog - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000109 541.0
DYD2_k127_3245647_1 Histidine kinase K07649 - 2.7.13.3 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005442 471.0
DYD2_k127_3245647_2 PFAM PhoH family protein K06217 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008564 449.0
DYD2_k127_3245647_3 Transcriptional regulatory protein, C terminal K02483,K07666,K07774 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001655 376.0
DYD2_k127_3245647_4 Belongs to the OMP decarboxylase family. Type 2 subfamily K01591 - 4.1.1.23 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003403 323.0
DYD2_k127_3245647_5 Single strand-specific metallo-endoribonuclease involved in late-stage 70S ribosome quality control and in maturation of the 3' terminus of the 16S rRNA K07042 - - 0.000000000000000000000000000000000007507 143.0
DYD2_k127_3245647_6 EamA-like transporter family - - - 0.00000000000000000000000000218 115.0
DYD2_k127_3245866_0 Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family - - - 0.0 1194.0
DYD2_k127_3245866_1 Belongs to the Glu Leu Phe Val dehydrogenases family K00262 - 1.4.1.4 9.993e-203 640.0
DYD2_k127_3245866_2 Belongs to the pseudouridine synthase RsuA family K06182 - 5.4.99.21 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003027 323.0
DYD2_k127_3245866_3 NADPH-quinone reductase (modulator of drug activity B) K00355 - 1.6.5.2 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001156 303.0
DYD2_k127_3245866_4 Biotin-lipoyl like - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000004701 291.0
DYD2_k127_3245866_5 Outer membrane efflux protein - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000003763 288.0
DYD2_k127_3245866_6 WHG domain - - - 0.0000000000000000000000000000000000000000000000000000002478 201.0
DYD2_k127_3245866_7 Histidine kinase - - - 0.000000000000000000000000000000000000000003779 156.0
DYD2_k127_3245866_8 methyl-accepting chemotaxis protein K03406 - - 0.0000000000000000006241 100.0
DYD2_k127_3245866_9 COG2197 Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain K07685 GO:0003674,GO:0003676,GO:0003677,GO:0005488,GO:0006355,GO:0008150,GO:0009889,GO:0010468,GO:0010556,GO:0019219,GO:0019222,GO:0031323,GO:0031326,GO:0050789,GO:0050794,GO:0051171,GO:0051252,GO:0060255,GO:0065007,GO:0080090,GO:0097159,GO:1901363,GO:1903506,GO:2000112,GO:2001141 - 0.000000000001371 76.0
DYD2_k127_3247026_0 Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009462 608.0
DYD2_k127_3247026_1 Involved in protein export. Acts as a chaperone by maintaining the newly synthesized protein in an open conformation. Functions as a peptidyl-prolyl cis-trans isomerase K03545 GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0044424,GO:0044464 - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001667 409.0
DYD2_k127_3247026_2 Squalene phytoene synthase K02291 - 2.5.1.32,2.5.1.99 0.00000000007863 73.0
DYD2_k127_3247026_3 COG1961 Site-specific recombinases, DNA invertase Pin homologs - - - 0.00005724 46.0
DYD2_k127_3259823_0 Ami_2 K03806 GO:0000270,GO:0003674,GO:0003824,GO:0005488,GO:0005575,GO:0006022,GO:0006026,GO:0006027,GO:0006807,GO:0008150,GO:0008152,GO:0008270,GO:0008745,GO:0009056,GO:0009057,GO:0009253,GO:0009254,GO:0009392,GO:0016020,GO:0016787,GO:0016810,GO:0016811,GO:0019867,GO:0030203,GO:0043167,GO:0043169,GO:0043170,GO:0046872,GO:0046914,GO:0061783,GO:0071704,GO:1901135,GO:1901136,GO:1901564,GO:1901565,GO:1901575 3.5.1.28 0.00000000000000000000000000000000000000000000000000006717 192.0
DYD2_k127_3259823_1 Cytochrome c assembly protein - - - 0.000000000000000000000000000000000000000000000000001558 193.0
DYD2_k127_3259823_2 - K06950 - - 0.0005558 48.0
DYD2_k127_3261033_0 Alpha beta hydrolase - - - 3.642e-239 755.0
DYD2_k127_3261033_1 TonB-dependent receptor K02014 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005243 548.0
DYD2_k127_3261033_2 HPP family K07168 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001771 341.0
DYD2_k127_3261033_3 Acyltransferase family - - - 0.000000000000000000000000000000000000000000000000000000000000004213 230.0
DYD2_k127_3261033_4 Histidine kinase K15011 - 2.7.13.3 0.000000000000000000000000000000000000000000000000000000000000122 229.0
DYD2_k127_3261033_5 response regulator K15012 - - 0.0000000000000000000000000000000000000000000000000000008768 198.0
DYD2_k127_3261033_6 PIN domain - - - 0.000000000000000000000000000000000000000001965 161.0
DYD2_k127_3261033_7 Lipase (class 3) - - - 0.000000000000000000000000000004573 130.0
DYD2_k127_3261033_8 SpoVT / AbrB like domain - - - 0.000000000000000000000000001771 113.0
DYD2_k127_3274544_0 Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain K07657,K07664 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000884 381.0
DYD2_k127_3274544_1 Methyltransferase required for the conversion of demethylmenaquinol (DMKH2) to menaquinol (MKH2) and the conversion of 2-polyprenyl-6-methoxy-1,4-benzoquinol (DDMQH2) to 2- polyprenyl-3-methyl-6-methoxy-1,4-benzoquinol (DMQH2) K03183 - 2.1.1.163,2.1.1.201 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006171 360.0
DYD2_k127_3274544_2 TIGRFAM phosphate regulon sensor kinase PhoR K07636 - 2.7.13.3 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002403 363.0
DYD2_k127_3274544_3 import inner membrane translocase, subunit Tim44 - - - 0.00000000000000000000000000000000000000000000000000011 199.0
DYD2_k127_3274544_4 Protein of unknown function (DUF971) - - - 0.0000000000000000000000000000000000000000000000006849 178.0
DYD2_k127_3274544_5 SCP-2 sterol transfer family K03690 - - 0.0000000000000000000009447 106.0
DYD2_k127_3274544_6 Is probably a protein kinase regulator of UbiI activity which is involved in aerobic coenzyme Q (ubiquinone) biosynthesis K03688 - - 0.00000000000000000001843 93.0
DYD2_k127_327571_0 Catalyzes the NADPH-dependent reduction of L-glutamate 5-phosphate into L-glutamate 5-semialdehyde and phosphate. The product spontaneously undergoes cyclization to form 1-pyrroline-5- carboxylate K00147 - 1.2.1.41 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000006611 295.0
DYD2_k127_327571_1 DNA polymerase III, delta' subunit K02340 - 2.7.7.7 0.00000000000000000000000000000000000000000000000000001048 203.0
DYD2_k127_327571_2 Belongs to the class-I aminoacyl-tRNA synthetase family K01869 - 6.1.1.4 0.0000000000000000000000000000000003237 132.0
DYD2_k127_327571_3 Together with LptD, is involved in the assembly of lipopolysaccharide (LPS) at the surface of the outer membrane. Required for the proper assembly of LptD. Binds LPS and may serve as the LPS recognition site at the outer membrane K03643 - - 0.000000000000000000002186 100.0
DYD2_k127_3288750_0 Belongs to the peptidase S41A family K03797 - 3.4.21.102 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005245 569.0
DYD2_k127_3288750_1 Belongs to the phosphoglycerate mutase family. BPG- dependent PGAM subfamily K01834 - 5.4.2.11 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001091 408.0
DYD2_k127_3288750_10 Type II secretion system (T2SS), protein N K02463 - - 0.000000000000000000000000001979 123.0
DYD2_k127_3288750_11 Peptidase M15 - - - 0.000000000000000000000005406 108.0
DYD2_k127_3288750_12 General secretion pathway protein I K02458 - - 0.00000000000000000000001566 105.0
DYD2_k127_3288750_13 Glycerol-3-phosphate dehydrogenase K00057 - 1.1.1.94 0.0000000000000000004149 89.0
DYD2_k127_3288750_14 Protein of unknown function (DUF3108) - - - 0.0000000000003956 79.0
DYD2_k127_3288750_15 General secretion pathway protein K02459 GO:0002790,GO:0006810,GO:0008104,GO:0008150,GO:0009306,GO:0009987,GO:0015031,GO:0015628,GO:0015833,GO:0032940,GO:0033036,GO:0042886,GO:0045184,GO:0046903,GO:0051179,GO:0051234,GO:0055085,GO:0071702,GO:0071705,GO:0071806,GO:0098776 - 0.00000000005182 72.0
DYD2_k127_3288750_16 General secretion pathway protein L K02461 - - 0.00000001638 66.0
DYD2_k127_3288750_17 general secretion pathway protein H K02457 - - 0.000000338 58.0
DYD2_k127_3288750_18 general secretion pathway protein K02452 - - 0.00000401 56.0
DYD2_k127_3288750_19 Involved in a type II secretion system (T2SS, formerly general secretion pathway, GSP) for the export of proteins K02462 - - 0.0003498 50.0
DYD2_k127_3288750_2 COG0476 Dinucleotide-utilizing enzymes involved in molybdopterin and thiamine biosynthesis family 2 K21029 - 2.7.7.80 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006357 345.0
DYD2_k127_3288750_3 One of the proteins required for the normal export of preproteins out of the cell cytoplasm. It is a molecular chaperone that binds to a subset of precursor proteins, maintaining them in a translocation-competent state. It also specifically binds to its receptor SecA K03071 - - 0.00000000000000000000000000000000000000000000000000000000000000005069 228.0
DYD2_k127_3288750_4 general secretion pathway protein G K02456 - - 0.0000000000000000000000000000000000000000000000000000000000000658 216.0
DYD2_k127_3288750_5 Peptidase family M23 - - - 0.000000000000000000000000000000000000000000000000000000000004988 224.0
DYD2_k127_3288750_6 had-superfamily hydrolase subfamily ia, variant 3 K07025 - - 0.000000000000000000000000000000000000000000228 169.0
DYD2_k127_3288750_7 PFAM General secretion pathway protein K K02460 - - 0.000000000000000000000000000000000000005482 158.0
DYD2_k127_3288750_8 Has a glutathione-disulfide oxidoreductase activity in the presence of NADPH and glutathione reductase. Reduces low molecular weight disulfides and proteins K03676 - - 0.000000000000000000000000000000002201 130.0
DYD2_k127_3288750_9 PFAM Rhodanese domain protein K01011 - 2.8.1.1,2.8.1.2 0.000000000000000000000000000003892 125.0
DYD2_k127_3292362_0 dna topoisomerase III K03169 - 5.99.1.2 0.0 1227.0
DYD2_k127_3292362_1 Bacterial protein of unknown function (DUF839) - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001505 538.0
DYD2_k127_3292362_10 Beta-lactamase superfamily domain - - - 0.0000000000000000000000000000000000000000000000000009356 197.0
DYD2_k127_3292362_11 chemotaxis K03406 - - 0.000000000000000000000000000000000000000000000001915 193.0
DYD2_k127_3292362_12 transporter component K07112 - - 0.000000000000000000000000000000000000000000002392 168.0
DYD2_k127_3292362_13 Cytochrome P460 - - - 0.00000000000000000000000000000000000000000001209 169.0
DYD2_k127_3292362_14 transporter component K07112 - - 0.0000000000000000000000000000000000000000002729 163.0
DYD2_k127_3292362_15 Catalyzes the last two steps in the biosynthesis of 5- methylaminomethyl-2-thiouridine (mnm(5)s(2)U) at the wobble position (U34) in tRNA. Catalyzes the FAD-dependent demodification of cmnm(5)s(2)U34 to nm(5)s(2)U34, followed by the transfer of a methyl group from S-adenosyl-L-methionine to nm(5)s(2)U34, to form mnm(5)s(2)U34 K15461 - 2.1.1.61 0.00000000000000000000000000000000000000004905 169.0
DYD2_k127_3292362_16 signal peptide protein - - - 0.000000000000000000000000000000000002046 145.0
DYD2_k127_3292362_17 ABC-type amino acid transport signal transduction systems periplasmic component domain - - - 0.0000000000000000000000000000000001866 139.0
DYD2_k127_3292362_2 Signal transduction histidine kinase involved in nitrogen fixation and metabolism regulation - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004175 481.0
DYD2_k127_3292362_3 Belongs to the peptidase M48B family K03799 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005327 458.0
DYD2_k127_3292362_4 Histidine kinase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003166 430.0
DYD2_k127_3292362_5 Specifically methylates the cytosine at position 967 (m5C967) of 16S rRNA K03500 - 2.1.1.176 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001162 379.0
DYD2_k127_3292362_6 Attaches a formyl group to the free amino group of methionyl-tRNA(fMet). The formyl group appears to play a dual role in the initiator identity of N-formylmethionyl-tRNA by promoting its recognition by IF2 and preventing the misappropriation of this tRNA by the elongation apparatus K00604 - 2.1.2.9 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001248 355.0
DYD2_k127_3292362_7 PhoD-like phosphatase, N-terminal domain K01113 - 3.1.3.1 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002181 348.0
DYD2_k127_3292362_8 Removes the formyl group from the N-terminal Met of newly synthesized proteins. Requires at least a dipeptide for an efficient rate of reaction. N-terminal L-methionine is a prerequisite for activity but the enzyme has broad specificity at other positions K01462 - 3.5.1.88 0.000000000000000000000000000000000000000000000000000000000000000001075 234.0
DYD2_k127_3292362_9 TIGRFAM DNA protecting protein DprA K04096 - - 0.0000000000000000000000000000000000000000000000000000000000000003737 233.0
DYD2_k127_3299964_0 Catalyzes cross-linking of the peptidoglycan cell wall K05515 - 3.4.16.4 5.386e-233 738.0
DYD2_k127_3299964_1 Allows the formation of correctly charged Gln-tRNA(Gln) through the transamidation of misacylated Glu-tRNA(Gln) in organisms which lack glutaminyl-tRNA synthetase. The reaction takes place in the presence of glutamine and ATP through an activated gamma-phospho-Glu-tRNA(Gln) K02433 - 6.3.5.6,6.3.5.7 6.707e-215 677.0
DYD2_k127_3299964_2 Actin K03569 - - 7.692e-199 622.0
DYD2_k127_3299964_3 Involved in formation and maintenance of cell shape K03570 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000007222 280.0
DYD2_k127_3299964_4 Peptidoglycan polymerase that is essential for cell wall elongation K05837 - - 0.000000000000000000000000000000000000000000000000000000000000000000002433 241.0
DYD2_k127_3299964_5 Allows the formation of correctly charged Asn-tRNA(Asn) or Gln-tRNA(Gln) through the transamidation of misacylated Asp- tRNA(Asn) or Glu-tRNA(Gln) in organisms which lack either or both of asparaginyl-tRNA or glutaminyl-tRNA synthetases. The reaction takes place in the presence of glutamine and ATP through an activated phospho-Asp-tRNA(Asn) or phospho-Glu-tRNA(Gln) K02434 - 6.3.5.6,6.3.5.7 0.0000000000000000000000000000000000000000000000000000000000000000002613 232.0
DYD2_k127_3299964_6 Rod shape-determining protein MreD K03571 - - 0.0000000000000000000000000000000000000000000000000001851 191.0
DYD2_k127_3299964_7 Allows the formation of correctly charged Asn-tRNA(Asn) or Gln-tRNA(Gln) through the transamidation of misacylated Asp- tRNA(Asn) or Glu-tRNA(Gln) in organisms which lack either or both of asparaginyl-tRNA or glutaminyl-tRNA synthetases. The reaction takes place in the presence of glutamine and ATP through an activated phospho-Asp-tRNA(Asn) or phospho-Glu-tRNA(Gln) K02435 - 6.3.5.6,6.3.5.7 0.00000000000000000000000002141 112.0
DYD2_k127_3322814_0 repeat protein - - - 8.546e-213 671.0
DYD2_k127_3322814_1 Sugar (and other) transporter - - - 5.492e-207 653.0
DYD2_k127_3322814_2 2-nitropropane dioxygenase K00459 - 1.13.12.16 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009064 477.0
DYD2_k127_3322814_3 Ubiquinol oxidase subunit 2 K02297 - 1.10.3.10 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000596 446.0
DYD2_k127_3322814_4 Enoyl-CoA hydratase/isomerase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002323 384.0
DYD2_k127_3322814_5 Domain of unknown function (DUF305) - - - 0.000000000000000000000000000006277 127.0
DYD2_k127_3331218_0 - - - - 1.212e-225 725.0
DYD2_k127_3331218_1 Alkyl hydroperoxide reductase K03386 GO:0003674,GO:0003824,GO:0004601,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006873,GO:0006875,GO:0006879,GO:0006950,GO:0006979,GO:0007154,GO:0008150,GO:0008152,GO:0009267,GO:0009321,GO:0009605,GO:0009636,GO:0009970,GO:0009987,GO:0009991,GO:0010033,GO:0016209,GO:0016491,GO:0016667,GO:0016671,GO:0016684,GO:0019725,GO:0030003,GO:0031667,GO:0031668,GO:0031669,GO:0032843,GO:0032991,GO:0033194,GO:0033195,GO:0033212,GO:0033214,GO:0033554,GO:0042221,GO:0042592,GO:0042594,GO:0042802,GO:0044424,GO:0044444,GO:0044464,GO:0046916,GO:0048878,GO:0050801,GO:0050896,GO:0051716,GO:0055065,GO:0055072,GO:0055076,GO:0055080,GO:0055082,GO:0055114,GO:0065007,GO:0065008,GO:0070887,GO:0071496,GO:0097237,GO:0098754,GO:0098771,GO:0098869,GO:1901700,GO:1902494,GO:1990204,GO:1990748 1.11.1.15 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003588 308.0
DYD2_k127_3331218_2 Domain of unknown function (DUF4382) - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000018 280.0
DYD2_k127_3331218_3 SNARE associated Golgi protein - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000008163 265.0
DYD2_k127_3331218_4 PFAM Neutral alkaline nonlysosomal ceramidase - - - 0.00000000000000000000000000000000000000000000000000000009755 211.0
DYD2_k127_3331218_5 Bacterial regulatory proteins, tetR family - - - 0.00000000000000000000000000000000000000002644 159.0
DYD2_k127_3331218_6 ABC transporter, phosphonate, periplasmic substrate-binding protein K02044 - - 0.000000000000000000000000002204 121.0
DYD2_k127_3331218_7 PFAM Neutral alkaline nonlysosomal ceramidase - - - 0.0000000000000000000176 93.0
DYD2_k127_3331218_8 - - - - 0.00000000000000001726 86.0
DYD2_k127_3331218_9 Alkyl hydroperoxide reductase K03387 - - 0.0000000007086 61.0
DYD2_k127_3335214_0 Magnesium chelatase, subunit ChlI C-terminal K07391 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002285 471.0
DYD2_k127_3335214_1 Belongs to the P(II) protein family K04752 - - 0.0000000000000000000000000000000000000000000000000000000006816 203.0
DYD2_k127_3335214_2 Major Facilitator Superfamily - - - 0.00000000000000000000000000000000000000000000005929 179.0
DYD2_k127_3335214_3 Bacterial protein of unknown function (Gcw_chp) - - - 0.000000000000000000000000000000003067 138.0
DYD2_k127_3335214_4 Membrane fusogenic activity K09806 - - 0.000004035 51.0
DYD2_k127_3342315_0 Sodium:alanine symporter family K03310 - - 2.599e-221 694.0
DYD2_k127_3342315_1 Domain of unknown function (DUF4331) - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008942 610.0
DYD2_k127_3342315_10 Domain of unknown function (DUF4198) - - - 0.000002579 57.0
DYD2_k127_3342315_11 Sel1-like repeats. K14026 - - 0.000004268 58.0
DYD2_k127_3342315_2 TonB dependent receptor - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009105 471.0
DYD2_k127_3342315_3 Involved in the import of queuosine (Q) precursors, required for Q precursor salvage K09125 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008079 359.0
DYD2_k127_3342315_4 Enoyl-(Acyl carrier protein) reductase K07124 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000001249 287.0
DYD2_k127_3342315_5 Pfam:DUF2424 K14731 - 3.1.1.83 0.0000000000000000000000000000000000000000000000000000000000000000000000000647 256.0
DYD2_k127_3342315_6 - - - - 0.0000000000000000000000000000000000000000000000000000000000000003733 226.0
DYD2_k127_3342315_7 hydrolases or acyltransferases, alpha beta hydrolase superfamily - - - 0.00000000000000000000000000000000000000000000000000000000001137 216.0
DYD2_k127_3342315_8 NlpC/P60 family K13694 GO:0000270,GO:0003674,GO:0003824,GO:0004175,GO:0006022,GO:0006508,GO:0006807,GO:0008150,GO:0008152,GO:0008233,GO:0009254,GO:0016787,GO:0019538,GO:0030203,GO:0043170,GO:0044238,GO:0070011,GO:0071704,GO:0140096,GO:1901135,GO:1901564 3.4.17.13 0.0000000000000000000000000000000000005608 145.0
DYD2_k127_3342315_9 - - - - 0.000000000002197 68.0
DYD2_k127_3360684_0 Catalyzes the phosphatidyl group transfer from one phosphatidylglycerol molecule to another to form cardiolipin (CL) (diphosphatidylglycerol) and glycerol K06131 - - 0.000000000000000000000000000000000000000000000000000000000000000000000002132 257.0
DYD2_k127_3360684_1 Endonuclease/Exonuclease/phosphatase family - - - 0.000000000000000000000000000000000000000000000000000000000000000000000005961 251.0
DYD2_k127_3361538_0 Belongs to the thiolase family K00626 - 2.3.1.9 2.862e-201 633.0
DYD2_k127_3361538_1 Bacterial regulatory proteins, tetR family - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000001194 259.0
DYD2_k127_3361538_2 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000002263 253.0
DYD2_k127_3361538_3 Toxic component of a toxin-antitoxin (TA) module. An RNase - - - 0.000000000000000000000000000004026 126.0
DYD2_k127_3361538_4 Bacterial antitoxin of type II TA system, VapB - - - 0.000000000000000002401 90.0
DYD2_k127_3374092_0 Enoyl-(Acyl carrier protein) reductase K13774 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009367 360.0
DYD2_k127_3374092_1 Acetyl-CoA carboxylase, carboxyltransferase component (subunits alpha and beta K13778 - 6.4.1.5 0.000000000000000000000000000000000000000000000000000000000238 207.0
DYD2_k127_3390272_0 catalyzes the demethylation of specific methylglutamate residues introduced into the chemoreceptors (methyl-accepting chemotaxis proteins) by CheR K03412 - 3.1.1.61,3.5.1.44 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001812 467.0
DYD2_k127_3390272_1 Methylation of the membrane-bound methyl-accepting chemotaxis proteins (MCP) to form gamma-glutamyl methyl ester residues in MCP K00575 - 2.1.1.80 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001416 335.0
DYD2_k127_3390272_2 Histidine kinase K07675 - 2.7.13.3 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002355 328.0
DYD2_k127_3390272_3 Necessary for efficient RNA polymerase transcription elongation past template-encoded arresting sites. The arresting sites in DNA have the property of trapping a certain fraction of elongating RNA polymerases that pass through, resulting in locked ternary complexes. Cleavage of the nascent transcript by cleavage factors such as GreA or GreB allows the resumption of elongation from the new 3'terminus. GreB releases sequences of up to 9 nucleotides in length K04760 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000001966 258.0
DYD2_k127_3390272_4 (GGDEF) domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000371 257.0
DYD2_k127_3390272_5 helix_turn_helix, Lux Regulon - - - 0.0000000000000000000000000000000000000000000000000000000000000000000137 239.0
DYD2_k127_3390272_6 CheD chemotactic sensory transduction K03411 GO:0006935,GO:0008150,GO:0009605,GO:0040011,GO:0042221,GO:0042330,GO:0050896 3.5.1.44 0.00000000000000000000000000000000000000000006783 168.0
DYD2_k127_3390272_7 COG1020 Non-ribosomal peptide synthetase modules and related proteins - - - 0.0006373 44.0
DYD2_k127_3397044_0 oxidoreductase K04090 - 1.2.7.8 0.0 1242.0
DYD2_k127_3397044_1 Catalyzes the formation of the isocyclic ring in chlorophyll biosynthesis. Mediates the cyclase reaction, which results in the formation of divinylprotochlorophyllide (Pchlide) characteristic of all chlorophylls from magnesium-protoporphyrin IX 13-monomethyl ester (MgPMME) - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008155 523.0
DYD2_k127_3397044_10 Catalyzes the ADP transfer from ATP to D-glycero-beta-D- manno-heptose 1-phosphate, yielding ADP-D-glycero-beta-D-manno- heptose K21345 - 2.7.7.70 0.000000000000000000000000000000000000000000000000000000000000002207 222.0
DYD2_k127_3397044_11 Protein of unknown function (DUF1365) K09701 - - 0.0000000000000000000000000000000000000000001976 169.0
DYD2_k127_3397044_12 SnoaL-like domain K01822 - 5.3.3.1 0.00000000000000000000000000000000000000339 154.0
DYD2_k127_3397044_13 Chalcone isomerase-like - - - 0.0000000000000000000000000000000000002144 149.0
DYD2_k127_3397044_14 - - - - 0.000000000000000000000000001426 121.0
DYD2_k127_3397044_15 Pilus assembly protein CpaB K02279 - - 0.000000000000004324 80.0
DYD2_k127_3397044_16 PFAM TadE family protein - - - 0.0003132 49.0
DYD2_k127_3397044_2 Flavin containing amine oxidoreductase K06954 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005883 463.0
DYD2_k127_3397044_3 mechanosensitive ion channel K16052 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006179 461.0
DYD2_k127_3397044_4 Mycolic acid cyclopropane synthetase K00574 - 2.1.1.79 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003353 429.0
DYD2_k127_3397044_5 MFS/sugar transport protein - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000003571 284.0
DYD2_k127_3397044_6 Short-chain dehydrogenase reductase SDR - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000001571 270.0
DYD2_k127_3397044_7 Converts GTP to 7,8-dihydroneopterin triphosphate K09007 - 3.5.4.16 0.000000000000000000000000000000000000000000000000000000000000000000000000005815 254.0
DYD2_k127_3397044_8 Protein of unknown function (DUF3833) - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000002954 251.0
DYD2_k127_3397044_9 Polyphosphate kinase 2 (PPK2) - - - 0.000000000000000000000000000000000000000000000000000000000000000004984 237.0
DYD2_k127_3401387_0 The UvrABC repair system catalyzes the recognition and processing of DNA lesions. UvrA is an ATPase and a DNA-binding protein. A damage recognition complex composed of 2 UvrA and 2 UvrB subunits scans DNA for abnormalities. When the presence of a lesion has been verified by UvrB, the UvrA molecules dissociate K03701 - - 0.0 1068.0
DYD2_k127_3401387_1 modulator of DNA gyrase K03568 - - 6.059e-211 666.0
DYD2_k127_3401387_2 Stereospecific condensation of phosphoenolpyruvate (PEP) and D-erythrose-4-phosphate (E4P) giving rise to 3-deoxy-D- arabino-heptulosonate-7-phosphate (DAHP) K01626 - 2.5.1.54 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000277 546.0
DYD2_k127_3401387_3 PFAM Nitrilase cyanide hydratase and apolipoprotein N-acyltransferase K01501,K11206 - 3.5.5.1 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000002344 292.0
DYD2_k127_3424354_0 Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family K07787 - - 2.658e-311 962.0
DYD2_k127_3424354_1 Cupin 2, conserved barrel domain protein - - - 0.0000000000000000000000006734 107.0
DYD2_k127_3424726_0 Part of the Sec protein translocase complex. Interacts with the SecYEG preprotein conducting channel. SecDF uses the proton motive force (PMF) to complete protein translocation after the ATP-dependent function of SecA K03074 - - 0.000000000000000000000000000000000005137 138.0
DYD2_k127_3424726_1 Flagellar protein YcgR - - - 0.0000000000001112 81.0
DYD2_k127_3426481_0 RNA polymerase sigma factor K03088 - - 0.00000000000000000000000000000000002943 143.0
DYD2_k127_3426481_1 helix_turn_helix, Lux Regulon K07689,K07690 - - 0.0000000003003 71.0
DYD2_k127_3426481_2 Anti-sigma-K factor rskA - - - 0.00000009578 55.0
DYD2_k127_3437974_0 Catalyzes the attachment of proline to tRNA(Pro) in a two-step reaction proline is first activated by ATP to form Pro- AMP and then transferred to the acceptor end of tRNA(Pro). As ProRS can inadvertently accommodate and process non-cognate amino acids such as alanine and cysteine, to avoid such errors it has two additional distinct editing activities against alanine. One activity is designated as 'pretransfer' editing and involves the tRNA(Pro)-independent hydrolysis of activated Ala-AMP. The other activity is designated 'posttransfer' editing and involves deacylation of mischarged Ala-tRNA(Pro). The misacylated Cys- tRNA(Pro) is not edited by ProRS K01881 - 6.1.1.15 9.973e-243 760.0
DYD2_k127_3437974_1 Catalyzes the transfer of a phosphate group to glutamate to form L-glutamate 5-phosphate K00931 - 2.7.2.11 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008833 512.0
DYD2_k127_3437974_2 An essential GTPase which binds GTP, GDP and possibly (p)ppGpp with moderate affinity, with high nucleotide exchange rates and a fairly low GTP hydrolysis rate. Plays a role in control of the cell cycle, stress response, ribosome biogenesis and in those bacteria that undergo differentiation, in morphogenesis control K03979 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000224 501.0
DYD2_k127_3437974_3 Accelerates the degradation of transcripts by removing pyrophosphate from the 5'-end of triphosphorylated RNA, leading to a more labile monophosphorylated state that can stimulate subsequent ribonuclease cleavage K08311 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000002479 298.0
DYD2_k127_3437974_4 alpha/beta hydrolase fold - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000001831 280.0
DYD2_k127_3437974_5 Peptidoglycan-binding domain 1 protein K01185,K21470 - 3.2.1.17 0.0000000000000000000000000000000000000000000000962 175.0
DYD2_k127_3442758_0 Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000001438 251.0
DYD2_k127_3442758_1 Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000985 259.0
DYD2_k127_3442758_2 KaiC K04485 - - 0.00000000000000002199 82.0
DYD2_k127_3452930_0 response regulator K15012 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000002682 273.0
DYD2_k127_3452930_1 Histidine kinase K15011 - 2.7.13.3 0.00000000000000000000000000000000000000000000000000000000000008993 217.0
DYD2_k127_3452930_2 SecretomeP prediction - - - 0.00000000000000000000000000000000000001324 150.0
DYD2_k127_3470920_0 Transcriptional regulator K07734 - - 0.00000000000000000000000000000000000000000000000000000000000000000003844 237.0
DYD2_k127_3470920_1 membrane transporter protein K07090 - - 0.000000000000000000000000000000000000000000000000002395 188.0
DYD2_k127_3470920_2 HNH endonuclease - - - 0.0000000000000000000000000000002158 126.0
DYD2_k127_3470920_3 Predicted membrane protein (DUF2254) - - - 0.00000000000003361 77.0
DYD2_k127_3470920_4 general secretion pathway protein - - - 0.000000002931 63.0
DYD2_k127_3471273_0 C4-dicarboxylate ABC transporter permease - - - 4.02e-269 844.0
DYD2_k127_3471273_1 Increases the formation of ribosomal termination complexes and stimulates activities of RF-1 and RF-2. It binds guanine nucleotides and has strong preference for UGA stop codons. It may interact directly with the ribosome. The stimulation of RF- 1 and RF-2 is significantly reduced by GTP and GDP, but not by GMP K02837 - - 3.978e-261 813.0
DYD2_k127_3471273_2 C4-dicarboxylate ABC transporter substrate-binding protein K07080 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004232 474.0
DYD2_k127_3471273_3 Bacterial transcriptional repressor - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002423 315.0
DYD2_k127_3471273_4 Transcriptional regulator - - - 0.00000000000000000000000000000000000009137 144.0
DYD2_k127_3471273_5 acyl-coA-binding protein - - - 0.00000000000000000000000000000000008694 134.0
DYD2_k127_347744_0 Belongs to the prokaryotic molybdopterin-containing oxidoreductase family - - - 1.04e-269 847.0
DYD2_k127_347744_1 DinB superfamily K18912 - 1.14.99.50 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001083 578.0
DYD2_k127_347744_2 alcohol dehydrogenase K12957 GO:0003674,GO:0003824,GO:0004033,GO:0005488,GO:0008106,GO:0008150,GO:0008152,GO:0008270,GO:0016491,GO:0016614,GO:0016616,GO:0043167,GO:0043169,GO:0046872,GO:0046914,GO:0055114 - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007578 422.0
DYD2_k127_347744_3 Methyltransferase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005298 319.0
DYD2_k127_347744_4 NADPH-quinone reductase (modulator of drug activity B) - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001527 304.0
DYD2_k127_347744_5 PFAM flavin reductase domain protein, FMN-binding - - - 0.00000000000000000000000000000000000000004053 159.0
DYD2_k127_347744_6 bacterial-type RNA polymerase transcription factor activity, metal ion regulated sequence-specific DNA binding K19591 - - 0.000000000000000000000000000002815 125.0
DYD2_k127_347744_7 response to cobalt ion - - - 0.000000000000000000000000000005656 126.0
DYD2_k127_347744_8 Thioredoxin-like domain - - - 0.000000000000000000000000001412 117.0
DYD2_k127_3488856_0 Arabinose-binding domain of AraC transcription regulator, N-term - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005443 336.0
DYD2_k127_3488856_1 COG1073 hydrolases of the alpha beta superfamily K06889 - - 0.00000000000000000000000000000000000000000000007906 179.0
DYD2_k127_3504130_0 Polysaccharide biosynthesis protein CapD - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004944 494.0
DYD2_k127_3504130_1 PFAM NAD-dependent epimerase dehydratase K01784 - 5.1.3.2 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004634 324.0
DYD2_k127_3504130_2 Bacterial sugar transferase K13012 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006309 312.0
DYD2_k127_3504130_3 Belongs to the UDP-N-acetylglucosamine 2-epimerase family K01791 - 5.1.3.14 0.000000000000000000000000000000000000000000000001152 176.0
DYD2_k127_3505156_0 AcrB/AcrD/AcrF family K07239 - - 2.306e-269 837.0
DYD2_k127_3505156_1 PFAM Thioredoxin K00384 - 1.8.1.9 0.0000000000009891 71.0
DYD2_k127_3509430_0 Neutral/alkaline non-lysosomal ceramidase, C-terminal - - - 4.785e-204 658.0
DYD2_k127_3509430_1 TRAP-type C4-dicarboxylate transport system periplasmic component - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000019 357.0
DYD2_k127_3509430_2 Mechanosensitive ion channel - - - 0.000000000000000000000000000000000000000000000000000000000000000000003165 238.0
DYD2_k127_3513272_0 Component of the ubiquinol-cytochrome c reductase complex (complex III or cytochrome b-c1 complex), which is a respiratory chain that generates an electrochemical potential coupled to ATP synthesis K00412 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000165 416.0
DYD2_k127_3513272_1 Glutathione S-transferase K03599 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006553 349.0
DYD2_k127_3513272_2 Cytochrome C1 K00413 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001186 350.0
DYD2_k127_3513272_3 Stringent starvation protein B K03600 - - 0.000000000000000000000000000000000000000002422 161.0
DYD2_k127_3517291_0 Catalyzes the transfer of the enolpyruvyl moiety of phosphoenolpyruvate (PEP) to the 5-hydroxyl of shikimate-3- phosphate (S3P) to produce enolpyruvyl shikimate-3-phosphate and inorganic phosphate K00800 GO:0003674,GO:0003824,GO:0003866,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006082,GO:0008150,GO:0008152,GO:0009058,GO:0009423,GO:0009987,GO:0016053,GO:0016740,GO:0016765,GO:0019752,GO:0043436,GO:0043648,GO:0043650,GO:0044237,GO:0044249,GO:0044281,GO:0044283,GO:0044424,GO:0044444,GO:0044464,GO:0046394,GO:0046417,GO:0071704,GO:1901576 2.5.1.19 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002173 572.0
DYD2_k127_3517291_1 Belongs to the class-II pyridoxal-phosphate-dependent aminotransferase family. Histidinol-phosphate aminotransferase subfamily K00817 - 2.6.1.9 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002641 393.0
DYD2_k127_3517291_2 prephenate dehydrogenase K04517 - 1.3.1.12 0.00000000000000000000000000000000000000000000000000000000000000009922 232.0
DYD2_k127_3517291_3 Belongs to the cytidylate kinase family. Type 1 subfamily K00945 - 2.7.4.25 0.0000000000000002914 80.0
DYD2_k127_3517600_0 Sulfate transporter K03321 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000125 459.0
DYD2_k127_3517600_1 Is required not only for elongation of protein synthesis but also for the initiation of all mRNA translation through initiator tRNA(fMet) aminoacylation K01874 - 6.1.1.10 0.0000000000000000000000000000000000000000000000000000000000000000004322 234.0
DYD2_k127_353785_0 Patatin-like phospholipase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001952 397.0
DYD2_k127_353785_1 Short chain dehydrogenase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000006136 242.0
DYD2_k127_353785_2 Poly(hydroxyalcanoate) granule associated protein (phasin) - - - 0.00000000000000000000000000004603 120.0
DYD2_k127_3560591_0 Poly-beta-hydroxybutyrate polymerase (PhaC) N-terminus K03821 GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0044424,GO:0044464 - 1.194e-200 643.0
DYD2_k127_3560591_1 Belongs to the thiolase family K00626 GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0044424,GO:0044464 2.3.1.9 1.164e-196 619.0
DYD2_k127_3560591_2 helicase K03722 - 3.6.4.12 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002983 575.0
DYD2_k127_3560591_3 Catalyzes the methylthiolation of an aspartic acid residue of ribosomal protein S12 K14441 - 2.8.4.4 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001899 413.0
DYD2_k127_3560591_4 Belongs to the short-chain dehydrogenases reductases (SDR) family K00023 GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005777,GO:0042579,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0044424,GO:0044444,GO:0044464 1.1.1.36 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006864 406.0
DYD2_k127_3560591_5 Part of the outer membrane protein assembly complex, which is involved in assembly and insertion of beta-barrel proteins into the outer membrane K05807 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007134 313.0
DYD2_k127_3560591_6 Responsible for synthesis of pseudouridine from uracil K06180 - 5.4.99.23 0.0000000000000000000000000000000000000000000000000000000000000000000000000001252 271.0
DYD2_k127_3560591_7 Polyhydroxyalkanoate synthesis repressor PhaR - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000002687 255.0
DYD2_k127_3560591_8 Belongs to the multicopper oxidase YfiH RL5 family K05810 GO:0003674,GO:0003824,GO:0005488,GO:0005507,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0008150,GO:0008152,GO:0016491,GO:0016679,GO:0016682,GO:0042802,GO:0042803,GO:0043167,GO:0043169,GO:0044424,GO:0044444,GO:0044464,GO:0046872,GO:0046914,GO:0046983,GO:0055114 - 0.0000000000000000000000000000000000000000000000008114 187.0
DYD2_k127_3560591_9 - - - - 0.000000000002177 70.0
DYD2_k127_3590321_0 Synthesizes selenophosphate from selenide and ATP K01008 - 2.7.9.3 0.0 1140.0
DYD2_k127_3590321_1 Glycosyl transferases group 1 - - - 0.00000000000000000000000000000000000000000000001355 176.0
DYD2_k127_3590321_2 Resistance to Hg(2 ) in bacteria appears to be governed by a specialized system which includes mercuric reductase. MerA protein is responsible for volatilizing mercury as Hg(0) K00520 - 1.16.1.1 0.0000000000000000000000000000000000000000002248 167.0
DYD2_k127_3590321_3 Transglycosylase SLT domain - - - 0.00000000000000002147 84.0
DYD2_k127_3622577_0 TIGRFAM 40-residue YVTN family beta-propeller repeat - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002082 382.0
DYD2_k127_3622577_1 In Escherichia coli the protein UvrY is part of a two-component system along with BarA that is needed for efficient switching between glycolytic and gluconeogenic carbon sources possibly by regulating the Csr system - - - 0.000000000000000000000000000000000000000000000000000000000000006739 222.0
DYD2_k127_3622577_2 - - - - 0.00000000000000000000000000000000000000000008851 166.0
DYD2_k127_3622577_3 COG0457 FOG TPR repeat - - - 0.0000000001871 68.0
DYD2_k127_3622577_4 Histidine kinase - - - 0.0000000162 59.0
DYD2_k127_3625611_0 flavoprotein involved in K transport - - - 1.23e-211 668.0
DYD2_k127_3625611_1 PFAM carboxyl transferase K01969 - 6.4.1.4 0.000000000000000000000000000000000000000000000000000000000000000000000000000003139 269.0
DYD2_k127_3625611_2 2-hydroxychromene-2-carboxylate isomerase - - - 0.0000000000000000000000000000000000000000000003829 174.0
DYD2_k127_3625611_3 Exopolysaccharide synthesis, ExoD - - - 0.00000000000000000000000000000000000001426 153.0
DYD2_k127_3637591_0 Phosphonate ABC transporter K02042 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002789 505.0
DYD2_k127_3637591_1 Part of the ABC transporter complex PhnCDE involved in phosphonates import. Responsible for energy coupling to the transport system K02041 - 3.6.3.28 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002414 400.0
DYD2_k127_3637591_2 Phosphonate metabolism protein PhnG K06166 - 2.7.8.37 0.000000000000000000000000000000000000005586 154.0
DYD2_k127_3637591_3 PFAM phosphonate metabolism K06165 - 2.7.8.37 0.0000000000000000000000002337 111.0
DYD2_k127_3649091_0 Specifically methylates position 2 of adenine 2503 in 23S rRNA and position 2 of adenine 37 in tRNAs K06941 - 2.1.1.192 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008186 541.0
DYD2_k127_3649091_1 Converts 2C-methyl-D-erythritol 2,4-cyclodiphosphate (ME-2,4cPP) into 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate K03526 - 1.17.7.1,1.17.7.3 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002036 311.0
DYD2_k127_3649091_2 Inhibitor of apoptosis-promoting Bax1 K19416 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000466 270.0
DYD2_k127_3649091_3 Major role in the synthesis of nucleoside triphosphates other than ATP. The ATP gamma phosphate is transferred to the NDP beta phosphate via a ping-pong mechanism, using a phosphorylated active-site intermediate K00940 - 2.7.4.6 0.00000000000000000000000000000000000000000000000000000000000000000000006346 241.0
DYD2_k127_3649091_4 Domain of unknown function (DUF4115) K15539 GO:0005575,GO:0005623,GO:0005886,GO:0005887,GO:0008150,GO:0008360,GO:0016020,GO:0016021,GO:0022603,GO:0022604,GO:0031224,GO:0031226,GO:0044425,GO:0044459,GO:0044464,GO:0050789,GO:0050793,GO:0050794,GO:0051128,GO:0065007,GO:0065008,GO:0071944 - 0.0000000000000000000000000001411 128.0
DYD2_k127_3688791_0 Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family K18138 - - 5.553e-284 901.0
DYD2_k127_3701979_0 Protein of unknown function (DUF3604) - - - 0.00000000000000000000000000000000000000000000000000000000000001117 224.0
DYD2_k127_3701979_1 HupE / UreJ protein - - - 0.00000000000000000000000000000000000000002006 164.0
DYD2_k127_3707981_0 Part of the ABC transporter complex PstSACB involved in phosphate import. Responsible for energy coupling to the transport system K02036 - 3.6.3.27 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000126 449.0
DYD2_k127_3707981_1 TIGRFAM phosphate ABC transporter, inner membrane subunit PstA K02038 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003951 418.0
DYD2_k127_3733866_0 Catalyzes the sequential NAD-dependent oxidations of L- histidinol to L-histidinaldehyde and then to L-histidine K00013 - 1.1.1.23 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002311 602.0
DYD2_k127_3733866_1 Cell wall formation. Adds enolpyruvyl to UDP-N- acetylglucosamine K00790 - 2.5.1.7 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008048 568.0
DYD2_k127_3733866_10 imidazoleglycerol-phosphate dehydratase K01693 - 4.2.1.19 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001965 323.0
DYD2_k127_3733866_11 Component of the ubiquinol-cytochrome c reductase complex (complex III or cytochrome b-c1 complex), which is a respiratory chain that generates an electrochemical potential coupled to ATP synthesis K00411 - 1.10.2.2 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000214 293.0
DYD2_k127_3733866_12 IGPS catalyzes the conversion of PRFAR and glutamine to IGP, AICAR and glutamate. The HisH subunit provides the glutamine amidotransferase activity that produces the ammonia necessary to HisF for the synthesis of IGP and AICAR K02501 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000603 274.0
DYD2_k127_3733866_13 NIF3 (NGG1p interacting factor 3) - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000585 267.0
DYD2_k127_3733866_14 Catalyzes the hydrolysis of the adenine ring of phosphoribosyl-AMP K01496,K11755 - 3.5.4.19,3.6.1.31 0.0000000000000000000000000000000000000000000000000009052 186.0
DYD2_k127_3733866_15 COG0537 Diadenosine tetraphosphate (Ap4A) hydrolase and other HIT family hydrolases K02503 - - 0.00000000000000000000000000000000000000000001938 167.0
DYD2_k127_3733866_16 phosphoribosyl-ATP pyrophosphohydrolase K01523 - 3.6.1.31 0.000000000000000000000000000000004431 130.0
DYD2_k127_3733866_17 Belongs to the BolA IbaG family - - - 0.0000000000000000000000000000005328 123.0
DYD2_k127_3733866_18 Part of the twin-arginine translocation (Tat) system that transports large folded proteins containing a characteristic twin-arginine motif in their signal peptide across membranes. Together with TatC, TatB is part of a receptor directly interacting with Tat signal peptides. TatB may form an oligomeric binding site that transiently accommodates folded Tat precursor proteins before their translocation K03117 - - 0.00000000000000000000000000052 118.0
DYD2_k127_3733866_19 Part of the twin-arginine translocation (Tat) system that transports large folded proteins containing a characteristic twin-arginine motif in their signal peptide across membranes. TatA could form the protein-conducting channel of the Tat system K03116 - - 0.0000000000000000000000002176 106.0
DYD2_k127_3733866_2 Component of the ubiquinol-cytochrome c reductase complex (complex III or cytochrome b-c1 complex), which is a respiratory chain that generates an electrochemical potential coupled to ATP synthesis K00412 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001132 454.0
DYD2_k127_3733866_3 Belongs to the peptidase S1C family K04691,K04772 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000473 438.0
DYD2_k127_3733866_4 TIGRFAM phosphoribosylformimino-5-aminoimidazole carboxamide ribotide isomerase K01814 - 5.3.1.16 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004934 418.0
DYD2_k127_3733866_5 IGPS catalyzes the conversion of PRFAR and glutamine to IGP, AICAR and glutamate. The HisF subunit catalyzes the cyclization activity that produces IGP and AICAR from PRFAR using the ammonia provided by the HisH subunit K02500 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001664 414.0
DYD2_k127_3733866_6 Transport permease protein K01992 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002807 370.0
DYD2_k127_3733866_7 Belongs to the class-II pyridoxal-phosphate-dependent aminotransferase family. Histidinol-phosphate aminotransferase subfamily K00817 - 2.6.1.9 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000324 355.0
DYD2_k127_3733866_8 Catalyzes the condensation of ATP and 5-phosphoribose 1- diphosphate to form N'-(5'-phosphoribosyl)-ATP (PR-ATP). Has a crucial role in the pathway because the rate of histidine biosynthesis seems to be controlled primarily by regulation of HisG enzymatic activity K00765 - 2.4.2.17 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006982 338.0
DYD2_k127_3733866_9 Part of the twin-arginine translocation (Tat) system that transports large folded proteins containing a characteristic twin-arginine motif in their signal peptide across membranes. Together with TatB, TatC is part of a receptor directly interacting with Tat signal peptides K03118 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000175 327.0
DYD2_k127_3738621_0 AcrB/AcrD/AcrF family K03296,K18138 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001705 387.0
DYD2_k127_3738621_1 Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family K03585 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000394 270.0
DYD2_k127_3738621_2 oxidation-reduction process - - - 0.0000000000000000000000000000000000000000000000000000000002346 211.0
DYD2_k127_3738621_3 Tetracycline transcriptional repressor MAATS-type K03577 - - 0.000000000000000000000000000000000000000000000009227 179.0
DYD2_k127_3742596_0 Belongs to the IlvD Edd family K01687 - 4.2.1.9 3.411e-309 953.0
DYD2_k127_3742596_1 ABC-type branched-chain amino acid transport systems, periplasmic component K01999 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002926 435.0
DYD2_k127_3742596_2 Transfers the N-acyl diglyceride group on what will become the N-terminal cysteine of membrane lipoproteins K13292 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003424 339.0
DYD2_k127_3742596_3 membrane transporter protein K07090 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000003113 291.0
DYD2_k127_3742596_4 Cytochrome c K08738 - - 0.000000000000000000000000000009566 121.0
DYD2_k127_3757963_0 COG0601 ABC-type dipeptide oligopeptide nickel transport systems, permease components K02033 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007533 456.0
DYD2_k127_3757963_1 PFAM binding-protein-dependent transport systems inner membrane component K02034 - - 0.000000000000000000000000007163 117.0
DYD2_k127_3757963_2 Extracellular solute-binding protein, family 5 middle family protein 22 - - - 0.00000003969 56.0
DYD2_k127_376111_0 3-hydroxyacyl-CoA dehydrogenase K07516 - 1.1.1.35 1.276e-299 936.0
DYD2_k127_376111_1 Belongs to the thiolase family K00632 - 2.3.1.16 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000143 598.0
DYD2_k127_376111_2 Enoyl-CoA hydratase/isomerase - - - 0.0000001862 54.0
DYD2_k127_376300_0 ATP-dependent serine protease that mediates the selective degradation of mutant and abnormal proteins as well as certain short-lived regulatory proteins. Required for cellular homeostasis and for survival from DNA damage and developmental changes induced by stress. Degrades polypeptides processively to yield small peptide fragments that are 5 to 10 amino acids long. Binds to DNA in a double-stranded, site-specific manner K01338 - 3.4.21.53 0.0 1029.0
DYD2_k127_376300_1 Histone-like DNA-binding protein which is capable of wrapping DNA to stabilize it, and thus to prevent its denaturation under extreme environmental conditions K03530 - - 0.00000000000000000000000000000000000000009487 153.0
DYD2_k127_3763369_0 Alkyl sulfatase dimerisation - - - 3.023e-256 805.0
DYD2_k127_3763369_1 dioxygenase of extradiol dioxygenase family K06991 - - 0.000000000000000001025 87.0
DYD2_k127_37761_0 Involved in peptidoglycan biosynthesis. Transports lipid-linked peptidoglycan precursors from the inner to the outer leaflet of the cytoplasmic membrane K03980 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006847 545.0
DYD2_k127_37761_1 Catalyzes the reversible transfer of the terminal phosphate group between ATP and AMP. Plays an important role in cellular energy homeostasis and in adenine nucleotide metabolism K00939 GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0044424,GO:0044464 2.7.4.3 0.00000000000000000000000000000000000000000000000206 174.0
DYD2_k127_37761_2 Protein of unknown function (DUF3579) - - - 0.0000000000000000000000000000005077 123.0
DYD2_k127_37761_3 Binds directly to 16S ribosomal RNA K02968 - - 0.000000000000000000000000000443 117.0
DYD2_k127_3791708_0 repeat protein - - - 0.0 1224.0
DYD2_k127_3791708_1 chemotaxis protein K03407 - 2.7.13.3 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002968 619.0
DYD2_k127_3791708_10 protein conserved in bacteria K09950 - - 0.000000000000000000000000000000000000000000000003326 181.0
DYD2_k127_3791708_11 PFAM CheW-like K03408 - - 0.00000000000000000000000000000000000000000000002023 175.0
DYD2_k127_3791708_13 COG0454 Histone acetyltransferase HPA2 and related acetyltransferases K06718 - 2.3.1.178 0.0000000000000000000000000000000000000000000001914 173.0
DYD2_k127_3791708_14 chemotaxis K03406 - - 0.0000000000000000000000000000000000000000009377 171.0
DYD2_k127_3791708_15 COG1846 Transcriptional regulators - - - 0.0000000000000000000000000000001543 129.0
DYD2_k127_3791708_16 Protein of unknown function (DUF2796) - - - 0.0000000000000000000000004997 113.0
DYD2_k127_3791708_17 Diguanylate cyclase - - - 0.000000000000000000000001531 117.0
DYD2_k127_3791708_18 cytochrome - - - 0.00000000000000000004952 98.0
DYD2_k127_3791708_19 5-carboxymethyl-2-hydroxymuconate isomerase K01826 - 5.3.3.10 0.00000000000002793 78.0
DYD2_k127_3791708_2 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). K03406,K05874 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001845 607.0
DYD2_k127_3791708_21 PGAP1-like protein - - - 0.000000003796 66.0
DYD2_k127_3791708_22 Alpha beta hydrolase - - - 0.000007822 48.0
DYD2_k127_3791708_3 Flavocytochrome c sulphide dehydrogenase, flavin-binding K05301,K17218 - 1.8.2.1,1.8.5.4 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000284 568.0
DYD2_k127_3791708_4 Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family K00836 GO:0003674,GO:0003824,GO:0006082,GO:0006807,GO:0008150,GO:0008152,GO:0008483,GO:0009058,GO:0009987,GO:0016053,GO:0016740,GO:0016769,GO:0018130,GO:0019491,GO:0019752,GO:0032787,GO:0042399,GO:0043436,GO:0044237,GO:0044249,GO:0044281,GO:0044283,GO:0046394,GO:0046483,GO:0071704,GO:0072330,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576 2.6.1.76 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002657 514.0
DYD2_k127_3791708_5 MacB-like periplasmic core domain K02004 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003887 386.0
DYD2_k127_3791708_6 Serine aminopeptidase, S33 - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002473 325.0
DYD2_k127_3791708_7 ATPases associated with a variety of cellular activities K02003 - - 0.00000000000000000000000000000000000000000000000000000000000002146 222.0
DYD2_k127_3791708_8 Catalyzes the circularization of gamma-N-acetyl- alpha,gamma-diaminobutyric acid (ADABA) to ectoine (1,4,5,6- tetrahydro-2-methyl-4-pyrimidine carboxylic acid), which is an excellent osmoprotectant K06720 - 4.2.1.108 0.000000000000000000000000000000000000000000000000000001801 195.0
DYD2_k127_3791708_9 cheY-homologous receiver domain K03413 - - 0.00000000000000000000000000000000000000000000000000001674 190.0
DYD2_k127_3843400_0 DEAD-like helicases superfamily - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003315 356.0
DYD2_k127_3843400_1 lytic transglycosylase activity - - - 0.00000000000000000000000000000000000000000000000000000000002601 238.0
DYD2_k127_3854992_0 COG1233 Phytoene dehydrogenase and related proteins K10027 - 1.3.99.26,1.3.99.28,1.3.99.29,1.3.99.31 6.364e-248 772.0
DYD2_k127_3854992_1 Acyl-CoA dehydrogenase, C-terminal domain K00249 - 1.3.8.7 1.487e-213 668.0
DYD2_k127_3854992_10 Catalyzes the cleavage of beta-carotene at its central double bond (15,15') to yield two molecules of all-trans-retinal K21817 - 1.13.11.63 0.0000000000000000000000000000000000000000000000000000000000000003886 231.0
DYD2_k127_3854992_11 Short-chain dehydrogenase reductase (SDR) - - - 0.000000000000000009011 85.0
DYD2_k127_3854992_2 Bifunctional enzyme with both catalase and broad- spectrum peroxidase activity K03782 GO:0000302,GO:0003674,GO:0003824,GO:0004096,GO:0004601,GO:0005488,GO:0005575,GO:0005576,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006950,GO:0006979,GO:0008150,GO:0008152,GO:0009056,GO:0009636,GO:0009987,GO:0010035,GO:0016209,GO:0016491,GO:0016684,GO:0016999,GO:0017001,GO:0017144,GO:0020037,GO:0033554,GO:0034599,GO:0034614,GO:0035690,GO:0042221,GO:0042493,GO:0042542,GO:0042737,GO:0042743,GO:0042744,GO:0044237,GO:0044248,GO:0044424,GO:0044444,GO:0044464,GO:0046677,GO:0046906,GO:0048037,GO:0050896,GO:0051186,GO:0051187,GO:0051716,GO:0055114,GO:0070301,GO:0070887,GO:0071236,GO:0072593,GO:0097159,GO:0097237,GO:0098754,GO:0098869,GO:1901363,GO:1901700,GO:1901701,GO:1990748 1.11.1.21 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007415 558.0
DYD2_k127_3854992_3 Belongs to the pirin family K06911 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009344 409.0
DYD2_k127_3854992_4 Bacteriorhodopsin-like protein - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001021 400.0
DYD2_k127_3854992_5 Isochorismatase family - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002401 394.0
DYD2_k127_3854992_6 transcriptional regulator - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001399 397.0
DYD2_k127_3854992_7 Lycopene cyclase protein K06443 - 5.5.1.19 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006353 329.0
DYD2_k127_3854992_8 PFAM Squalene phytoene synthase K02291 - 2.5.1.32,2.5.1.99 0.000000000000000000000000000000000000000000000000000000000000000000000000000008341 271.0
DYD2_k127_3854992_9 Belongs to the FPP GGPP synthase family K13789 - 2.5.1.1,2.5.1.10,2.5.1.29 0.00000000000000000000000000000000000000000000000000000000000000000002104 243.0
DYD2_k127_3863863_0 Ubiquinone biosynthesis hydroxylase, UbiH UbiF VisC COQ6 family - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000008162 266.0
DYD2_k127_3863863_1 Required for disulfide bond formation in some periplasmic proteins. Acts by transferring its disulfide bond to other proteins and is reduced in the process K03981 - 5.3.4.1 0.000000000000000000000000000000000000000000000000000000009665 207.0
DYD2_k127_3863863_2 - - - - 0.0001884 47.0
DYD2_k127_3888072_0 Prevents misfolding and promotes the refolding and proper assembly of unfolded polypeptides generated under stress conditions K04077 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002291 558.0
DYD2_k127_3888072_1 Cache_2 K03406 - - 0.00000000000000000000000000000000000000000000005385 186.0
DYD2_k127_3945649_0 Belongs to the hyi family K01816,K22131 - 5.3.1.22,5.3.1.35 0.0000000000000000000000000000000000000000000000000000000000000000000000000006684 263.0
DYD2_k127_3945649_1 Calcineurin-like phosphoesterase superfamily domain - - - 0.00000000000000000000000000000000000000000000000000000000003187 214.0
DYD2_k127_3945649_2 Produces ATP from ADP in the presence of a proton gradient across the membrane K02114 - - 0.00000000000000000000000000000000000000000000000000000000003283 208.0
DYD2_k127_3945649_3 Produces ATP from ADP in the presence of a proton gradient across the membrane. The catalytic sites are hosted primarily by the beta subunits K02112 - 3.6.3.14 0.0000000000000000000000000000000000000000000000000006712 183.0
DYD2_k127_3945649_4 COG2873 O-acetylhomoserine sulfhydrylase K01738,K01740 - 2.5.1.47,2.5.1.49 0.0000000000000000000003614 98.0
DYD2_k127_3953770_0 ABC1 family - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004112 501.0
DYD2_k127_3953770_1 Flavodoxin reductases (ferredoxin-NADPH reductases) family 1 K00528 - 1.18.1.2,1.19.1.1 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001937 435.0
DYD2_k127_3953770_10 Leucine carboxyl methyltransferase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000002528 250.0
DYD2_k127_3953770_11 Spermidine synthase K00797 - 2.5.1.16 0.000000000000000000000000000000000000000000000000000000000000000002794 234.0
DYD2_k127_3953770_12 protein conserved in bacteria K09966 - - 0.00000000000000000000000000000000000000000000000001215 182.0
DYD2_k127_3953770_13 Thioesterase superfamily K19222 GO:0003674,GO:0003824,GO:0006732,GO:0008150,GO:0008152,GO:0009058,GO:0009108,GO:0009233,GO:0009234,GO:0009987,GO:0016289,GO:0016787,GO:0016788,GO:0016790,GO:0042180,GO:0042181,GO:0044237,GO:0044249,GO:0044281,GO:0044283,GO:0051186,GO:0051188,GO:0061522,GO:0071704,GO:1901576,GO:1901661,GO:1901663 3.1.2.28 0.00000000000000000000000000000000000000000000000006271 181.0
DYD2_k127_3953770_14 protein conserved in bacteria - - - 0.00000000000000000000000000000000000000000000006256 185.0
DYD2_k127_3953770_15 decarboxylase K01607 - 4.1.1.44 0.00000000000000000000000000000000000002246 147.0
DYD2_k127_3953770_16 negative regulation of translational initiation - - - 0.000000000000000000002793 99.0
DYD2_k127_3953770_17 - - - - 0.0000001347 57.0
DYD2_k127_3953770_18 - - - - 0.0000005457 61.0
DYD2_k127_3953770_2 protein conserved in bacteria - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006868 429.0
DYD2_k127_3953770_3 Protein of unknown function (DUF1329) - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006361 376.0
DYD2_k127_3953770_4 Aminotransferase class-III K01845 - 5.4.3.8 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005699 364.0
DYD2_k127_3953770_5 Beta-lactamase superfamily domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002084 341.0
DYD2_k127_3953770_6 Serine aminopeptidase, S33 - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001694 331.0
DYD2_k127_3953770_7 Catalyzes the formation of phosphatidylethanolamine (PtdEtn) from phosphatidylserine (PtdSer) K01613 - 4.1.1.65 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001992 310.0
DYD2_k127_3953770_8 Dienelactone hydrolase family K01061 - 3.1.1.45 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000008129 299.0
DYD2_k127_3953770_9 Histidine kinase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000002802 282.0
DYD2_k127_3957326_0 Belongs to the ABC transporter superfamily K02010 - 3.6.3.30 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004514 415.0
DYD2_k127_3957326_1 ABC-type Fe3 transport system, permease component K02011 - - 0.0000000000001438 76.0
DYD2_k127_3961159_0 Catalyzes the condensation of (S)-aspartate-beta- semialdehyde (S)-ASA and pyruvate to 4-hydroxy- tetrahydrodipicolinate (HTPA) K01714 - 4.3.3.7 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006761 414.0
DYD2_k127_3961159_1 A domain family that is part of the cupin metalloenzyme superfamily. K18850 - 1.14.11.47 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002826 332.0
DYD2_k127_3961159_2 NlpB/DapX lipoprotein K07287 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000005955 269.0
DYD2_k127_3961159_3 Beta-lactamase superfamily domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000002162 239.0
DYD2_k127_3961159_4 peptidyl-prolyl K03775 - 5.2.1.8 0.000000000000000000000000000000000000000000001699 170.0
DYD2_k127_3961159_6 metallophosphoesterase - - - 0.0000398 49.0
DYD2_k127_3996913_0 COG1902 NADH flavin oxidoreductases, Old Yellow Enzyme family - - - 6.596e-209 656.0
DYD2_k127_3996913_1 Nitroreductase family - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002578 428.0
DYD2_k127_3996913_2 GDSL-like Lipase/Acylhydrolase family - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000004452 277.0
DYD2_k127_3996913_3 - - - - 0.000003578 49.0
DYD2_k127_4016589_0 DSBA-like thioredoxin domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002105 360.0
DYD2_k127_4016589_1 Beta-lactamase superfamily domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006531 352.0
DYD2_k127_4016589_2 transcriptional regulator - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002515 339.0
DYD2_k127_4016589_3 Co Zn Cd efflux system component - - - 0.000000000000000000000000000000000000000000000000000000000000008316 222.0
DYD2_k127_4016589_4 Thioredoxin K00384 - 1.8.1.9 0.00000000001096 68.0
DYD2_k127_401997_0 Ftsk_gamma K03466 - - 3.984e-246 766.0
DYD2_k127_401997_1 MgsA AAA+ ATPase C terminal K07478 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005597 447.0
DYD2_k127_401997_2 Participates in the translocation of lipoproteins from the inner membrane to the outer membrane. Only forms a complex with a lipoprotein if the residue after the N-terminal Cys is not an aspartate (The Asp acts as a targeting signal to indicate that the lipoprotein should stay in the inner membrane) K03634 - - 0.000000000000000000000000000000000000000004956 163.0
DYD2_k127_4031712_0 Assembles around the rod to form the L-ring and probably protects the motor basal body from shearing forces during rotation K02394 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001839 467.0
DYD2_k127_4031712_1 Flagellar basal body rod FlgEFG protein C-terminal K02392 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001256 374.0
DYD2_k127_4031712_2 Belongs to the flagella basal body rod proteins family K02396 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000009077 302.0
DYD2_k127_4031712_3 Assembles around the rod to form the L-ring and probably protects the motor basal body from shearing forces during rotation K02393 - - 0.0000000000000000000000000000000000000000000000002812 184.0
DYD2_k127_4031712_4 Bacterial flagellin N-terminal helical region K02397 - - 0.00000000000000000000000000000000000001969 156.0
DYD2_k127_4031712_5 TIGRFAM flagellar rod assembly protein muramidase FlgJ K02395 - - 0.00000000000000000008318 94.0
DYD2_k127_4042514_0 Amidohydrolase family - - - 9.506e-290 898.0
DYD2_k127_4042514_1 PFAM AMP-dependent synthetase and ligase K20034 - 6.2.1.44 2.603e-214 679.0
DYD2_k127_4042514_10 COG0229 Conserved domain frequently associated with peptide methionine sulfoxide reductase K07305 - 1.8.4.12 0.000000000000000000000000000000000000000000000000000000000007456 211.0
DYD2_k127_4042514_11 efflux transmembrane transporter activity - - - 0.00000000000000000000000000000000000000000006705 177.0
DYD2_k127_4042514_12 Protein of unknown function (DUF1223) - - - 0.000000000000000000000000000000000000000002863 166.0
DYD2_k127_4042514_13 Acetoacetate decarboxylase (ADC) - - - 0.00000000000000000000000000000000000000001799 161.0
DYD2_k127_4042514_14 glyoxalase bleomycin resistance protein dioxygenase - - - 0.000000000000000000000000000000000000004729 150.0
DYD2_k127_4042514_15 membrane - - - 0.0000000000000000000000000002719 118.0
DYD2_k127_4042514_16 Gamma-glutamyl cyclotransferase, AIG2-like - - - 0.000000000000000000004234 99.0
DYD2_k127_4042514_17 Protein of unknown function (DUF3604) - - - 0.0000000000004905 70.0
DYD2_k127_4042514_2 Key enzyme in the regulation of glycerol uptake and metabolism. Catalyzes the phosphorylation of glycerol to yield sn- glycerol 3-phosphate K00864 GO:0003674,GO:0003824,GO:0004370,GO:0005975,GO:0006066,GO:0006071,GO:0006793,GO:0006796,GO:0008150,GO:0008152,GO:0009987,GO:0016301,GO:0016310,GO:0016740,GO:0016772,GO:0016773,GO:0019400,GO:0019751,GO:0044237,GO:0044238,GO:0044262,GO:0044281,GO:0071704,GO:1901615 2.7.1.30 9.717e-210 662.0
DYD2_k127_4042514_3 Asparaginase K01424 - 3.5.1.1 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007199 533.0
DYD2_k127_4042514_4 TIGRFAM type I secretion system ATPase K12536 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001047 530.0
DYD2_k127_4042514_5 PFAM FAD dependent oxidoreductase K00111 - 1.1.5.3 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001418 520.0
DYD2_k127_4042514_6 KR domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006453 360.0
DYD2_k127_4042514_7 TIGRFAM type I secretion membrane fusion protein, HlyD family K02022,K12537,K16300 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005651 357.0
DYD2_k127_4042514_8 Metallo-beta-lactamase superfamily K00784 - 3.1.26.11 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004495 334.0
DYD2_k127_4042514_9 Has an important function as a repair enzyme for proteins that have been inactivated by oxidation. Catalyzes the reversible oxidation-reduction of methionine sulfoxide in proteins to methionine K07304 - 1.8.4.11 0.000000000000000000000000000000000000000000000000000000000000000000003807 242.0
DYD2_k127_405661_0 PFAM AMP-dependent synthetase and ligase K20034 - 6.2.1.44 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002814 456.0
DYD2_k127_405661_1 Transport and Golgi organisation 2 - - - 0.000000000000000000000000000000000000000000000000001358 192.0
DYD2_k127_405661_2 Stress responsive A/B Barrel Domain - - - 0.0000000000000000000000000000000002217 134.0
DYD2_k127_4057457_0 COG0569 K transport systems, NAD-binding component K03499 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005171 565.0
DYD2_k127_4057457_1 Low-affinity potassium transport system. Interacts with Trk system potassium uptake protein TrkA K03498 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004767 546.0
DYD2_k127_4057457_2 response regulator - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000001782 283.0
DYD2_k127_4057457_3 cobalamin synthesis protein, P47K - GO:0003674,GO:0003824,GO:0003924,GO:0005488,GO:0008270,GO:0016462,GO:0016787,GO:0016817,GO:0016818,GO:0017111,GO:0043167,GO:0043169,GO:0046872,GO:0046914 - 0.0002708 49.0
DYD2_k127_4090126_0 sterol desaturase - - - 0.000000000000000000000000000000000000000000000000000000000000000000707 235.0
DYD2_k127_4090126_1 RDD family - - - 0.00000000000000000000000000000000000000000000000004915 184.0
DYD2_k127_4090126_2 Methyltransferase FkbM domain - - - 0.0000000000000000000000000000000000008198 149.0
DYD2_k127_4100240_0 Catalyzes the ATP-dependent 2-thiolation of cytidine in position 32 of tRNA, to form 2-thiocytidine (s(2)C32). The sulfur atoms are provided by the cysteine cysteine desulfurase (IscS) system K14058 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004341 423.0
DYD2_k127_4100240_1 KR domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000003035 277.0
DYD2_k127_4100240_2 Putative S-adenosyl-L-methionine-dependent methyltransferase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000002057 255.0
DYD2_k127_4100240_3 dihydroneopterin aldolase K01633 - 1.13.11.81,4.1.2.25,5.1.99.8 0.000000000000000000000000000000003248 136.0
DYD2_k127_4127606_0 abc transporter K06020 - 3.6.3.25 5.97e-302 931.0
DYD2_k127_4127606_1 Pyridine nucleotide-disulphide oxidoreductase K05297,K12265 - 1.18.1.1 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008636 381.0
DYD2_k127_4127606_2 Domain of unknown function (DUF4440) - - - 0.000000000000000013 93.0
DYD2_k127_419087_0 Catalyzes the reversible conversion of 2- phosphoglycerate into phosphoenolpyruvate. It is essential for the degradation of carbohydrates via glycolysis K01689 GO:0000015,GO:0000287,GO:0003674,GO:0003824,GO:0004634,GO:0005488,GO:0005515,GO:0005575,GO:0005576,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005856,GO:0005975,GO:0006082,GO:0006090,GO:0006091,GO:0006096,GO:0006139,GO:0006163,GO:0006164,GO:0006165,GO:0006725,GO:0006732,GO:0006733,GO:0006753,GO:0006754,GO:0006757,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0009056,GO:0009058,GO:0009108,GO:0009117,GO:0009123,GO:0009124,GO:0009126,GO:0009127,GO:0009132,GO:0009135,GO:0009141,GO:0009142,GO:0009144,GO:0009145,GO:0009150,GO:0009152,GO:0009156,GO:0009161,GO:0009165,GO:0009166,GO:0009167,GO:0009168,GO:0009179,GO:0009185,GO:0009199,GO:0009201,GO:0009205,GO:0009206,GO:0009259,GO:0009260,GO:0009986,GO:0009987,GO:0016052,GO:0016053,GO:0016310,GO:0016829,GO:0016835,GO:0016836,GO:0017144,GO:0018130,GO:0019359,GO:0019362,GO:0019363,GO:0019438,GO:0019439,GO:0019637,GO:0019693,GO:0019752,GO:0032787,GO:0032991,GO:0034404,GO:0034641,GO:0034654,GO:0034655,GO:0042802,GO:0042866,GO:0043167,GO:0043169,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043436,GO:0044237,GO:0044238,GO:0044248,GO:0044249,GO:0044270,GO:0044271,GO:0044281,GO:0044283,GO:0044424,GO:0044444,GO:0044445,GO:0044464,GO:0046031,GO:0046034,GO:0046390,GO:0046394,GO:0046434,GO:0046483,GO:0046496,GO:0046700,GO:0046872,GO:0046939,GO:0051186,GO:0051188,GO:0055086,GO:0071704,GO:0072330,GO:0072521,GO:0072522,GO:0072524,GO:0072525,GO:0090407,GO:1901135,GO:1901137,GO:1901292,GO:1901293,GO:1901360,GO:1901361,GO:1901362,GO:1901564,GO:1901566,GO:1901575,GO:1901576,GO:1902494 4.2.1.11 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007916 494.0
DYD2_k127_419087_1 Redox regulated molecular chaperone. Protects both thermally unfolding and oxidatively damaged proteins from irreversible aggregation. Plays an important role in the bacterial defense system toward oxidative stress K04083 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000001191 274.0
DYD2_k127_419087_2 Essential cell division protein. May link together the upstream cell division proteins, which are predominantly cytoplasmic, with the downstream cell division proteins, which are predominantly periplasmic K05589 - - 0.0000000000000000000000007308 107.0
DYD2_k127_4192040_0 Involved in mRNA degradation. Catalyzes the phosphorolysis of single-stranded polyribonucleotides processively in the 3'- to 5'-direction K00962 - 2.7.7.8 0.0 1024.0
DYD2_k127_4193469_0 Belongs to the monovalent cation proton antiporter 2 (CPA2) transporter (TC 2.A.37) family K03455 - - 2.828e-195 623.0
DYD2_k127_4193469_1 His Kinase A (phosphoacceptor) domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000224 509.0
DYD2_k127_4193469_2 Methyl-accepting chemotaxis protein K03406 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000005264 302.0
DYD2_k127_4193469_3 Isocitrate lyase K01637 GO:0003674,GO:0003824,GO:0004451,GO:0005488,GO:0005975,GO:0006081,GO:0006082,GO:0006097,GO:0008150,GO:0008152,GO:0009987,GO:0016829,GO:0016830,GO:0016833,GO:0019752,GO:0032787,GO:0043167,GO:0043169,GO:0043436,GO:0044237,GO:0044238,GO:0044262,GO:0044281,GO:0046487,GO:0071704 4.1.3.1 0.000000000000000000000000000000000000000000000000000000005727 198.0
DYD2_k127_4193469_4 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase - - - 0.000000000000000000000000000001558 121.0
DYD2_k127_4194128_0 A type II topoisomerase that negatively supercoils closed circular double-stranded (ds) DNA in an ATP-dependent manner to modulate DNA topology and maintain chromosomes in an underwound state. Negative supercoiling favors strand separation, and DNA replication, transcription, recombination and repair, all of which involve strand separation. Also able to catalyze the interconversion of other topological isomers of dsDNA rings, including catenanes and knotted rings. Type II topoisomerases break and join 2 DNA strands simultaneously in an ATP-dependent manner K02469 - 5.99.1.3 0.0 1425.0
DYD2_k127_4194128_1 Catalyzes the deamination of 5-methylthioadenosine and S-adenosyl-L-homocysteine into 5-methylthioinosine and S-inosyl-L- homocysteine, respectively. Is also able to deaminate adenosine K12960 - 3.5.4.28,3.5.4.31 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002056 409.0
DYD2_k127_4194128_2 Catalyzes the reversible conversion of 3- phosphohydroxypyruvate to phosphoserine and of 3-hydroxy-2-oxo-4- phosphonooxybutanoate to phosphohydroxythreonine K00831 - 2.6.1.52 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001787 403.0
DYD2_k127_4194128_3 TIGRFAM chorismate mutase domain of proteobacterial P-protein, clade 2 K01713,K14170 - 4.2.1.51,4.2.1.91,5.4.99.5 0.000000000000000000000000000000000000000000000000003254 186.0
DYD2_k127_4194128_4 OmpA family K03286 - - 0.00000009817 57.0
DYD2_k127_4198015_0 ATPase related to phosphate starvation-inducible protein PhoH K07175 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001136 436.0
DYD2_k127_4198015_1 Redoxin K03564 GO:0003674,GO:0003824,GO:0004601,GO:0005575,GO:0005622,GO:0005623,GO:0005634,GO:0006950,GO:0006979,GO:0008150,GO:0008152,GO:0008379,GO:0009636,GO:0009987,GO:0016209,GO:0016491,GO:0016684,GO:0019725,GO:0033554,GO:0034599,GO:0042221,GO:0042592,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0044424,GO:0044464,GO:0045454,GO:0050789,GO:0050794,GO:0050896,GO:0051716,GO:0051920,GO:0055114,GO:0065007,GO:0065008,GO:0070887,GO:0097237,GO:0098754,GO:0098869,GO:1990748 1.11.1.15 0.00000000000000000000000000000000000000000000000000000000000000000008878 234.0
DYD2_k127_4198015_2 Small Multidrug Resistance protein - - - 0.000000000000000000000000000008235 122.0
DYD2_k127_4198015_3 Protein of unknown function (DUF498/DUF598) - - - 0.000000000002409 68.0
DYD2_k127_4210643_0 Molybdopterin oxidoreductase Fe4S4 domain K00123,K22015 - 1.17.1.9,1.17.99.7 4.445e-280 875.0
DYD2_k127_4210643_1 NADH-ubiquinone oxidoreductase-F iron-sulfur binding region K00122 - 1.17.1.9 1.724e-254 796.0
DYD2_k127_4210643_2 Patatin-like phospholipase K07001 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003672 338.0
DYD2_k127_4210643_3 Protein of unknown function (DUF4197) - - - 0.00000000000000000000000000000000000000000000000000000000000001164 225.0
DYD2_k127_4210643_4 Copper chaperone PCu(A)C K09796 - - 0.0000000000000000000000000000000000537 141.0
DYD2_k127_4210643_5 response regulator - - - 0.000000000003206 76.0
DYD2_k127_4212636_0 - - - - 2.429e-221 708.0
DYD2_k127_4212636_1 Haem-degrading - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005692 505.0
DYD2_k127_4212636_2 Cytochrome c3 - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006793 314.0
DYD2_k127_4212636_3 LVIVD repeat - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000001306 262.0
DYD2_k127_4212636_4 - - - - 0.00000000000000000000000000000000000000000000000000000000000000000000001614 250.0
DYD2_k127_4217450_0 glutamine synthetase K01915,K20712 GO:0003674,GO:0003824,GO:0006725,GO:0008150,GO:0008152,GO:0009987,GO:0016853,GO:0016866,GO:0034022,GO:0042537,GO:0044237,GO:0050486,GO:0071704,GO:1901360 5.4.4.3,6.3.1.2 1.499e-266 827.0
DYD2_k127_4217450_1 Threonine synthase K01733 - 4.2.3.1 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000155 616.0
DYD2_k127_4217450_10 SMART Rhodanese domain protein - - - 0.0000000000000000000000000000000000000000001335 165.0
DYD2_k127_4217450_11 - - - - 0.00000000000000000000005296 105.0
DYD2_k127_4217450_12 Important for reducing fluoride concentration in the cell, thus reducing its toxicity K06199 - - 0.000000000000000006068 88.0
DYD2_k127_4217450_13 Involved in sulfur transfer in the conversion of molybdopterin precursor Z to molybdopterin K03636 - - 0.00000000000379 72.0
DYD2_k127_4217450_2 COG2204 Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004192 505.0
DYD2_k127_4217450_3 homoserine dehydrogenase K00003 - 1.1.1.3 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001531 471.0
DYD2_k127_4217450_4 Histidine kinase K02482 - 2.7.13.3 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006778 467.0
DYD2_k127_4217450_5 Sigma-54 interaction domain K07712 GO:0003674,GO:0003676,GO:0003677,GO:0005488,GO:0006355,GO:0008150,GO:0009889,GO:0009890,GO:0009891,GO:0009892,GO:0009893,GO:0010468,GO:0010556,GO:0010557,GO:0010558,GO:0010604,GO:0010605,GO:0010628,GO:0010629,GO:0019219,GO:0019222,GO:0031323,GO:0031324,GO:0031325,GO:0031326,GO:0031327,GO:0031328,GO:0043565,GO:0045892,GO:0045893,GO:0045934,GO:0045935,GO:0048518,GO:0048519,GO:0048522,GO:0048523,GO:0050789,GO:0050794,GO:0051171,GO:0051172,GO:0051173,GO:0051252,GO:0051253,GO:0051254,GO:0060255,GO:0065007,GO:0080090,GO:0097159,GO:1901363,GO:1902679,GO:1902680,GO:1903506,GO:1903507,GO:1903508,GO:2000112,GO:2000113,GO:2001141 - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001932 417.0
DYD2_k127_4217450_6 Signal transduction histidine kinase, nitrogen specific K07708 - 2.7.13.3 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009899 413.0
DYD2_k127_4217450_7 Molybdenum cofactor synthesis K03750 - 2.10.1.1 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007938 376.0
DYD2_k127_4217450_8 molybdopterin-guanine dinucleotide biosynthesis protein K03753 - - 0.00000000000000000000000000000000000000000000000000000000000001085 219.0
DYD2_k127_4217450_9 Molybdopterin converting factor, large subunit K03635 - 2.8.1.12 0.00000000000000000000000000000000000000000000000000000000004732 208.0
DYD2_k127_4224502_0 Involved in the regulation of glutamine synthetase GlnA, a key enzyme in the process to assimilate ammonia. When cellular nitrogen levels are high, the C-terminal adenylyl transferase (AT) inactivates GlnA by covalent transfer of an adenylyl group from ATP to specific tyrosine residue of GlnA, thus reducing its activity. Conversely, when nitrogen levels are low, the N-terminal adenylyl removase (AR) activates GlnA by removing the adenylyl group by phosphorolysis, increasing its activity. The regulatory region of GlnE binds the signal transduction protein PII (GlnB) which indicates the nitrogen status of the cell K00982 - 2.7.7.42,2.7.7.89 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000169 282.0
DYD2_k127_4224502_1 Peptidoglycan polymerase that catalyzes glycan chain elongation from lipid-linked precursors K03814 - 2.4.1.129 0.0000000000000000000000000000000000000000000000000000000000000000000000001988 256.0
DYD2_k127_4224502_2 Involved in the biosynthesis of the chorismate, which leads to the biosynthesis of aromatic amino acids. Catalyzes the reversible NADPH linked reduction of 3-dehydroshikimate (DHSA) to yield shikimate (SA) K00014 GO:0000003,GO:0003006,GO:0003674,GO:0003824,GO:0004764,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006082,GO:0007275,GO:0008150,GO:0008152,GO:0009058,GO:0009423,GO:0009507,GO:0009532,GO:0009536,GO:0009570,GO:0009790,GO:0009791,GO:0009793,GO:0009987,GO:0010154,GO:0016053,GO:0016491,GO:0016614,GO:0016616,GO:0019632,GO:0019752,GO:0022414,GO:0032501,GO:0032502,GO:0032787,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0043436,GO:0043648,GO:0043650,GO:0044237,GO:0044249,GO:0044281,GO:0044283,GO:0044422,GO:0044424,GO:0044434,GO:0044435,GO:0044444,GO:0044446,GO:0044464,GO:0046394,GO:0046417,GO:0048316,GO:0048608,GO:0048731,GO:0048856,GO:0055114,GO:0061458,GO:0071704,GO:1901576,GO:1901615 1.1.1.25 0.0000000000000000000000000000000000000000000000000000005083 205.0
DYD2_k127_4224502_3 Periplasmic protein TonB links inner and outer membranes K03832 - - 0.0000001466 53.0
DYD2_k127_4224556_0 Catalyzes the formation of succinate from succinate semialdehyde - - - 1.387e-217 683.0
DYD2_k127_4224556_1 Belongs to the TPP enzyme family K01652 - 2.2.1.6 0.0000000000000000000000000000000000000000000000000000000000000000000006989 237.0
DYD2_k127_4224556_2 Helix-turn-helix K15773 - - 0.0000000145 61.0
DYD2_k127_4224556_3 intein-mediated protein splicing K00525,K00526,K01494,K02469,K03465,K12063,K14415,K17680,K21636 - 1.1.98.6,1.17.4.1,2.1.1.148,3.5.4.13,3.6.4.12,5.99.1.3,6.5.1.3 0.0000001907 63.0
DYD2_k127_4229237_0 Part of a stress-induced multi-chaperone system, it is involved in the recovery of the cell from heat-induced damage, in cooperation with DnaK, DnaJ and GrpE K03695 - - 0.0 1122.0
DYD2_k127_4245015_0 2-methylisocitrate dehydratase, Fe S-dependent K20455 - 4.2.1.117 6.507e-321 992.0
DYD2_k127_4245015_1 transporter K02011 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006716 338.0
DYD2_k127_4246493_0 PFAM Acyl-CoA dehydrogenase K00249 - 1.3.8.7 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007012 449.0
DYD2_k127_4246493_1 Acetyl propionyl-CoA carboxylase alpha subunit K01968,K13777 - 6.4.1.4,6.4.1.5 0.0000000000000000000001234 108.0
DYD2_k127_4246493_2 von willebrand factor, type A K12549 - - 0.000008062 55.0
DYD2_k127_4267448_0 Belongs to the LOG family K06966 - 3.2.2.10 0.00000000000000000000000000000000000000000000000000000000000000000000000746 248.0
DYD2_k127_4267448_1 Acetyltransferase (GNAT) domain K03823 - 2.3.1.183 0.0000000000000000000000000000000000000000000000000000000000000334 218.0
DYD2_k127_4267448_2 PFAM small multidrug resistance protein K11741 - - 0.00000000000000000000000000000000000000002371 155.0
DYD2_k127_4267448_3 membrane transporter protein K07090 - - 0.00000000000000002355 84.0
DYD2_k127_4280493_0 Fatty acid desaturase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002869 558.0
DYD2_k127_4287216_0 Phosphonate metabolism K06164 - 2.7.8.37 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006556 597.0
DYD2_k127_4287216_1 phosphonate metabolism protein PhnM K06162 - 3.6.1.63 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008272 547.0
DYD2_k127_4287216_10 Membrane protein TerC - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007796 302.0
DYD2_k127_4287216_11 histidine kinase A domain protein - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000002494 310.0
DYD2_k127_4287216_12 PFAM EAL domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000009279 295.0
DYD2_k127_4287216_13 Beta-Ig-H3 fasciclin - - - 0.000000000000000000000000000000000000000000000000000000000000000000008571 239.0
DYD2_k127_4287216_14 EamA-like transporter family - - - 0.0000000000000000000000000000000000000000000000000000000000000000004806 239.0
DYD2_k127_4287216_15 Histidine phosphatase superfamily (branch 1) - - - 0.0000000000000000000000000000000000000000000000000000000001394 209.0
DYD2_k127_4287216_16 Catalyzes the phosphorylation of ribose 1,5-bisphosphate to 5-phospho-D-ribosyl alpha-1-diphosphate (PRPP) K05774 - 2.7.4.23 0.00000000000000000000000000000000000000000000000000000004656 201.0
DYD2_k127_4287216_17 Peptidase propeptide and YPEB domain - - - 0.00000000000000000002013 95.0
DYD2_k127_4287216_18 peptidase - - - 0.00000000000000000003019 93.0
DYD2_k127_4287216_19 alpha-D-ribose 1-methylphosphonate 5-triphosphate synthase activity K06165 GO:0003674,GO:0005488,GO:0005515,GO:0005575,GO:0006793,GO:0008150,GO:0008152,GO:0009056,GO:0009987,GO:0019634,GO:0019637,GO:0019700,GO:0032991,GO:0042802,GO:0044237,GO:0046434,GO:0061694,GO:0061695,GO:0071704,GO:1901575,GO:1902494,GO:1904176,GO:1990234 2.7.8.37 0.00000000000000000005697 91.0
DYD2_k127_4287216_2 Catalyzes the breakage of the C-P bond in alpha-D-ribose 1-methylphosphonate 5-phosphate (PRPn) forming alpha-D-ribose K06163 - 4.7.1.1 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002595 492.0
DYD2_k127_4287216_3 Domain present in phytochromes and cGMP-specific phosphodiesterases. - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006222 504.0
DYD2_k127_4287216_4 phosphonate C-P lyase system protein PhnK K05781 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009838 452.0
DYD2_k127_4287216_5 phosphonate C-P lyase system protein PhnL K05780 - 2.7.8.37 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001172 327.0
DYD2_k127_4287216_6 beta-lactamase domain protein K06167 - 3.1.4.55 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001364 328.0
DYD2_k127_4287216_7 Histidine kinase-like ATPases - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004524 337.0
DYD2_k127_4287216_8 EamA-like transporter family - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002994 326.0
DYD2_k127_4287216_9 PFAM Response regulator receiver domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001272 302.0
DYD2_k127_4294411_0 AsmA family K07289 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001257 332.0
DYD2_k127_4294411_1 DNA polymerase III is a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria. The epsilon subunit contain the editing function and is a proofreading 3'-5' exonuclease K02342 - 2.7.7.7 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000001444 281.0
DYD2_k127_4294411_2 COG0741 Soluble lytic murein transglycosylase and related regulatory proteins (some contain LysM invasin domains) K08307 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000002769 259.0
DYD2_k127_4294411_3 Methyltransferase domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000001758 256.0
DYD2_k127_4294411_4 Thiolesterase that catalyzes the hydrolysis of S-D- lactoyl-glutathione to form glutathione and D-lactic acid K01069 - 3.1.2.6 0.0000000000000000000000000000000000000000000000000000000000000000001578 239.0
DYD2_k127_4294411_5 Endonuclease that specifically degrades the RNA of RNA- DNA hybrids K03469 - 3.1.26.4 0.0000000000000000000000000000000000000000000000000000000000000000006657 230.0
DYD2_k127_4306291_0 Involved in the biosynthesis of porphyrin-containing compound - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000209 450.0
DYD2_k127_4306291_1 Part of a stress-induced multi-chaperone system, it is involved in the recovery of the cell from heat-induced damage, in cooperation with DnaK, DnaJ and GrpE K03695 - - 0.00000000000000000000000004665 109.0
DYD2_k127_4306291_2 - - - - 0.0000000000000000001107 95.0
DYD2_k127_4306291_3 Pyrophosphatase that catalyzes the hydrolysis of nucleoside triphosphates to their monophosphate derivatives, with a high preference for the non-canonical purine nucleotides XTP (xanthosine triphosphate), dITP (deoxyinosine triphosphate) and ITP. Seems to function as a house-cleaning enzyme that removes non-canonical purine nucleotides from the nucleotide pool, thus preventing their incorporation into DNA RNA and avoiding chromosomal lesions K02428 - 3.6.1.66 0.00001975 47.0
DYD2_k127_430801_0 Transmembrane secretion effector - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001976 452.0
DYD2_k127_430801_1 histidine kinase A domain protein - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000112 364.0
DYD2_k127_430801_2 Lipase (class 3) - - - 0.0000000000000000000000000000000000000000000007921 181.0
DYD2_k127_4308094_0 peptidase m48, ste24p - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000006248 261.0
DYD2_k127_4308094_1 Catalyzes the conversion of (8S)-3',8-cyclo-7,8- dihydroguanosine 5'-triphosphate to cyclic pyranopterin monophosphate (cPMP) K03637 - 4.6.1.17 0.00000000000000000000000000000000000000000000000000000000000003346 217.0
DYD2_k127_430873_0 Phosphoribosylformylglycinamidine cyclo-ligase K01933 - 6.3.3.1 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001416 503.0
DYD2_k127_430873_1 Catalyzes the conversion of epoxyqueuosine (oQ) to queuosine (Q), which is a hypermodified base found in the wobble positions of tRNA(Asp), tRNA(Asn), tRNA(His) and tRNA(Tyr) K18979 - 1.17.99.6 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001363 365.0
DYD2_k127_430873_2 atpase or kinase K06925 - - 0.00000000000000000000000000000000000000000002685 166.0
DYD2_k127_430873_3 COG3209 Rhs family protein - - - 0.00000000000000000000000000000000000000006388 159.0
DYD2_k127_430873_4 Belongs to the DnaA family K10763 - - 0.00000000000000000000000000000000000002249 153.0
DYD2_k127_430873_5 PAAR repeat-containing protein - - - 0.000000000000000000000000004534 117.0
DYD2_k127_4330172_0 Bacterial regulatory helix-turn-helix protein, lysR family - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002616 393.0
DYD2_k127_4330172_1 EamA-like transporter family - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006558 370.0
DYD2_k127_4330172_2 Transcriptional regulatory protein, C terminal K07667 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000155 289.0
DYD2_k127_4330172_3 Histidine kinase - - - 0.00000000000000000000000000000000000000000000000000000000000000002794 241.0
DYD2_k127_4330172_4 Transport of potassium into the cell K03549 - - 0.0000000000000000000000000000000000000000000002192 170.0
DYD2_k127_4330172_5 Exopolysaccharide synthesis, ExoD - - - 0.00000000000000000000000001017 122.0
DYD2_k127_4330172_6 OsmC-like protein - - - 0.000000000000008846 76.0
DYD2_k127_4336970_0 Belongs to the sodium solute symporter (SSF) (TC 2.A.21) family K03307 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004792 447.0
DYD2_k127_4336970_1 ectoine hydroxylase K10674 - 1.14.11.55 0.00000000000000000000000000000000000000000000000000000000000000000000000000000008146 274.0
DYD2_k127_4336970_2 Role in flagellar biosynthesis K02421 - - 0.000000000000000000000000000000000000000000000000000000000000008788 224.0
DYD2_k127_4336970_3 Cyclic nucleotide-monophosphate binding domain - - - 0.00000000000000000000000008078 112.0
DYD2_k127_4336970_4 Role in flagellar biosynthesis K02420 - - 0.00000000000000001093 85.0
DYD2_k127_4336970_5 histidine kinase A domain protein - - - 0.00000000005301 76.0
DYD2_k127_4337706_0 peptidase U62, modulator of DNA gyrase K03592 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001506 520.0
DYD2_k127_4337706_1 Part of the tripartite ATP-independent periplasmic (TRAP) transport system - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003053 497.0
DYD2_k127_4337706_2 TIGRFAM molybdenum cofactor synthesis domain K03831 - 2.7.7.75 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006127 299.0
DYD2_k127_4337706_3 Serine hydrolase (FSH1) K06999 - - 0.000000000000000000000000000000000000000001103 159.0
DYD2_k127_4337706_4 Protein of unknown function (DUF615) K09889 - - 0.00000000000000000000000001124 117.0
DYD2_k127_4347407_0 Flavin-binding monooxygenase-like K03379 GO:0008150,GO:0008152,GO:0009056,GO:0009987,GO:0043446,GO:0043448,GO:0044237,GO:0044248,GO:0071704,GO:1901575 1.14.13.22 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001479 611.0
DYD2_k127_4347407_1 COG0524 Sugar kinases, ribokinase family K00856 - 2.7.1.20 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001873 432.0
DYD2_k127_4347407_2 Esterase lipase - - - 0.000000000000000000000000000000000000003603 154.0
DYD2_k127_4347407_3 Outer membrane lipoprotein K06077 - - 0.00000000000000000000000000000000000009559 147.0
DYD2_k127_4347407_4 integral membrane protein K02221 - - 0.000000000000000000000000000000000004346 143.0
DYD2_k127_4347407_5 Protein of unknown function (DUF1653) - - - 0.000000000000002187 78.0
DYD2_k127_4347407_6 zinc-ribbon domain - - - 0.00000000000001915 82.0
DYD2_k127_436774_0 The UvrABC repair system catalyzes the recognition and processing of DNA lesions. UvrA is an ATPase and a DNA-binding protein. A damage recognition complex composed of 2 UvrA and 2 UvrB subunits scans DNA for abnormalities. When the presence of a lesion has been verified by UvrB, the UvrA molecules dissociate K03701 - - 5.356e-319 995.0
DYD2_k127_4391592_0 DNA helicase K03657 - 3.6.4.12 1.405e-225 713.0
DYD2_k127_4391592_1 - - - - 0.0000000000000000000000000003642 123.0
DYD2_k127_4396443_0 Collagenase K08303 - - 7.413e-295 917.0
DYD2_k127_4396443_1 probably responsible for the translocation of the substrate across the membrane K02037 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002461 489.0
DYD2_k127_4396443_2 Has an important function as a repair enzyme for proteins that have been inactivated by oxidation. Catalyzes the reversible oxidation-reduction of methionine sulfoxide in proteins to methionine K07304 - 1.8.4.11 0.00000000000000000000000000000000000000000000000000000000000000002604 230.0
DYD2_k127_4396443_3 - - - - 0.0000000000002929 79.0
DYD2_k127_43966_0 that it carries out the mismatch recognition step. This protein has a weak ATPase activity K03555 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001311 555.0
DYD2_k127_43966_1 COG0483 Archaeal fructose-1,6-bisphosphatase and related enzymes of inositol monophosphatase family K01092 - 3.1.3.25 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004238 325.0
DYD2_k127_43966_2 Bacterial transferase hexapeptide (six repeats) K00640 - 2.3.1.30 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000005294 289.0
DYD2_k127_43966_3 PPIases accelerate the folding of proteins. It catalyzes the cis-trans isomerization of proline imidic peptide bonds in oligopeptides K03768 - 5.2.1.8 0.0000000000000000000000000000000000000000000000000000000000000000000000000000003348 268.0
DYD2_k127_43966_4 Catalyzes the formation of 2'O-methylated cytidine (Cm32) or 2'O-methylated uridine (Um32) at position 32 in tRNA K02533 - - 0.000000000000000000000000000000000000000000000000000001355 201.0
DYD2_k127_43966_5 Hydrolyzes the pyrophosphate bond of UDP-2,3- diacylglucosamine to yield 2,3-diacylglucosamine 1-phosphate (lipid X) and UMP by catalyzing the attack of water at the alpha-P atom. Involved in the biosynthesis of lipid A, a phosphorylated glycolipid that anchors the lipopolysaccharide to the outer membrane of the cell K03269 - 3.6.1.54 0.00000000000000000000000000000000000000000000001915 181.0
DYD2_k127_4406444_0 Glucose / Sorbosone dehydrogenase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001449 556.0
DYD2_k127_4406444_1 Transcriptional regulator, Crp Fnr family - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000008014 294.0
DYD2_k127_4406444_2 PFAM Cupin 2, conserved barrel domain protein - - - 0.0000000000000000000000000000000172 129.0
DYD2_k127_4406444_3 NlpC/P60 family K21471 - - 0.00000000000000002417 88.0
DYD2_k127_4406993_0 UPF0126 domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004001 310.0
DYD2_k127_4406993_1 Aldo keto reductase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000004444 288.0
DYD2_k127_4406993_2 MGS-like domain K01734 GO:0003674,GO:0003824,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006081,GO:0008150,GO:0008152,GO:0008929,GO:0009058,GO:0009438,GO:0009987,GO:0016829,GO:0016835,GO:0016838,GO:0019242,GO:0042180,GO:0042181,GO:0044237,GO:0044249,GO:0044281,GO:0044283,GO:0044424,GO:0044444,GO:0044464,GO:0046184,GO:0071704,GO:1901576 4.2.3.3 0.0000000000000000000000000000000000000000000000000000000001335 207.0
DYD2_k127_4406993_3 Protein of unknown function (DUF861) K06995 - - 0.00000000000000000000000000000000000000000002858 164.0
DYD2_k127_4406993_4 Belongs to the bacterial glucokinase family K00845 - 2.7.1.2 0.0000000004252 62.0
DYD2_k127_4406993_5 Elongator protein 3, MiaB family, Radical SAM - - - 0.00000001644 55.0
DYD2_k127_44230_0 COG0604 NADPH quinone reductase and related Zn-dependent oxidoreductases K00344 - 1.6.5.5 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009321 321.0
DYD2_k127_44230_1 Involved in the gluconeogenesis. Catalyzes stereospecifically the conversion of dihydroxyacetone phosphate (DHAP) to D-glyceraldehyde-3-phosphate (G3P) K01803 - 5.3.1.1 0.00000000000000000000000000000000000000000000000000000000000000000000000000002719 266.0
DYD2_k127_4467550_0 Belongs to the CDP-alcohol phosphatidyltransferase class-I family K17103 - 2.7.8.8 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000197 355.0
DYD2_k127_4467550_1 Catalyzes the formation of phosphatidylethanolamine (PtdEtn) from phosphatidylserine (PtdSer) K01613 - 4.1.1.65 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000191 281.0
DYD2_k127_4494545_0 NADH flavin oxidoreductase NADH oxidase K10680 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001699 604.0
DYD2_k127_4494545_1 LysR substrate binding domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000412 452.0
DYD2_k127_4494545_2 MazG-like family - - - 0.000003052 51.0
DYD2_k127_4509311_0 Fic/DOC family - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002005 490.0
DYD2_k127_4509311_1 Glycerol-3-phosphate dehydrogenase K00057 - 1.1.1.94 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001118 327.0
DYD2_k127_4509311_2 Catalyzes the reduction of dTDP-6-deoxy-L-lyxo-4- hexulose to yield dTDP-L-rhamnose K00067 - 1.1.1.133 0.000000000000000000000000000000000000000000000000000000000000000000009304 245.0
DYD2_k127_4509311_3 Ser Thr protein phosphatase family protein K09769 GO:0003674,GO:0003824,GO:0004112,GO:0004113,GO:0008081,GO:0016787,GO:0016788,GO:0042578 - 0.0000000000000000000000000000000000000000000000000000000000000004146 225.0
DYD2_k127_4513605_0 Belongs to the binding-protein-dependent transport system permease family K01997 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006018 401.0
DYD2_k127_4513605_1 ABC-type branched-chain amino acid transport systems, periplasmic component K01999 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001125 384.0
DYD2_k127_4527127_0 gamma-glutamyltransferase K00681 - 2.3.2.2,3.4.19.13 6.985e-235 734.0
DYD2_k127_453934_0 PhoD-like phosphatase, N-terminal domain K01113 - 3.1.3.1 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000207 354.0
DYD2_k127_453934_1 Phosphate acyltransferases - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008643 340.0
DYD2_k127_453934_2 receptor K02014 - - 0.0000000000000000000000000000000000000000000000018 183.0
DYD2_k127_453934_3 - - - - 0.0006633 47.0
DYD2_k127_454215_0 Catalyzes the radical-mediated insertion of two sulfur atoms into the C-6 and C-8 positions of the octanoyl moiety bound to the lipoyl domains of lipoate-dependent enzymes, thereby converting the octanoylated domains into lipoylated derivatives K03644 - 2.8.1.8 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004758 314.0
DYD2_k127_454215_1 Catalyzes the transfer of endogenously produced octanoic acid from octanoyl-acyl-carrier-protein onto the lipoyl domains of lipoate-dependent enzymes. Lipoyl-ACP can also act as a substrate although octanoyl-ACP is likely to be the physiological substrate K03801 - 2.3.1.181 0.0000000000000000000000000000000000000000000000000000000000000000000001753 246.0
DYD2_k127_454215_2 Acetyltransferase (GNAT) domain - - - 0.000000000000000000000000000000000003244 147.0
DYD2_k127_4563219_0 Forms oxaloacetate, a four-carbon dicarboxylic acid source for the tricarboxylic acid cycle K01595 - 4.1.1.31 1.033e-296 937.0
DYD2_k127_4563219_1 ATP-dependent transcriptional regulator K03556 - - 1.833e-237 763.0
DYD2_k127_4563219_2 Maltose transport system permease protein MalF P2 domain K10109 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003178 530.0
DYD2_k127_4563219_3 Binding-protein-dependent transport system inner membrane component K10110 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005327 426.0
DYD2_k127_4563219_4 Bacterial extracellular solute-binding protein K10108 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002505 424.0
DYD2_k127_4563219_5 FRG - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000489 361.0
DYD2_k127_4563219_6 Catalyzes the oxidation of glucose 6-phosphate to 6- phosphogluconolactone K00036 - 1.1.1.363,1.1.1.49 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000003038 295.0
DYD2_k127_4563219_7 helix_turn _helix lactose operon repressor K02529 - - 0.0000000000000000000000000000000000000000000000000001191 192.0
DYD2_k127_4570790_0 Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family - - - 2.959e-239 758.0
DYD2_k127_4570790_1 EamA-like transporter family - - - 0.000000000000000000000000000000000000000000000000000000000000000004217 236.0
DYD2_k127_4570790_2 Putative Tad-like Flp pilus-assembly - - - 0.00000000000000000734 98.0
DYD2_k127_4570790_3 PFAM TadE family protein - - - 0.00000002635 61.0
DYD2_k127_4572664_0 Membrane MotB of proton-channel complex MotA/MotB - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000003296 255.0
DYD2_k127_4572664_1 nuclear chromosome segregation - - - 0.0000000000000000000000000000000000000000000000000008248 196.0
DYD2_k127_4579942_0 flavoprotein involved in K transport - - - 1.007e-239 751.0
DYD2_k127_4579942_1 KR domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000019 322.0
DYD2_k127_4579942_2 COG2931 RTX toxins and related Ca2 -binding proteins - - - 0.000000000000000000000000000000000000000354 170.0
DYD2_k127_4579942_3 Carbohydrate binding domain - - - 0.00000000000000002158 87.0
DYD2_k127_4584611_0 Catalyzes the reversible cyclization of carbamoyl aspartate to dihydroorotate K01465 - 3.5.2.3 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004139 443.0
DYD2_k127_4584611_1 Domain of unknown function (DUF4147) K11529 - 2.7.1.165 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000004036 293.0
DYD2_k127_4584611_2 Protein of unknown function (DUF3025) - - - 0.000000000000000000000000000000000000002816 157.0
DYD2_k127_4584611_4 Belongs to the MraZ family K03925 - - 0.00002976 46.0
DYD2_k127_4626360_0 Nucleotidase that shows phosphatase activity on nucleoside 5'-monophosphates K03787 - 3.1.3.5 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004723 317.0
DYD2_k127_4626360_1 Belongs to the UPF0246 family K09861 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000002695 250.0
DYD2_k127_4626360_2 Catalyzes the methyl esterification of L-isoaspartyl residues in peptides and proteins that result from spontaneous decomposition of normal L-aspartyl and L-asparaginyl residues. It plays a role in the repair and or degradation of damaged proteins K00573 - 2.1.1.77 0.0000000000000000000000000000000000000000000000000000000000000000004537 236.0
DYD2_k127_4626360_3 peptidase K06194 - - 0.0000000000000000000000000000000000000000000000000000000000000001964 233.0
DYD2_k127_4631528_0 accessory protein K06959 - - 8.136e-296 928.0
DYD2_k127_4631528_1 Protein of unknown function (DUF465) - - - 0.000002599 50.0
DYD2_k127_4661263_0 Domain of unknown function (DUF3458_C) ARM repeats K01256 - 3.4.11.2 6.338e-276 872.0
DYD2_k127_4661263_1 D-fructose-1,6-bisphosphate 1-phosphohydrolase class 1 K03841 GO:0003674,GO:0003824,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005975,GO:0005984,GO:0005985,GO:0005986,GO:0005996,GO:0006000,GO:0006002,GO:0006006,GO:0006094,GO:0006793,GO:0006796,GO:0008150,GO:0008152,GO:0009058,GO:0009311,GO:0009312,GO:0009987,GO:0016043,GO:0016051,GO:0016311,GO:0016787,GO:0016788,GO:0016791,GO:0019203,GO:0019318,GO:0019319,GO:0019637,GO:0022607,GO:0030388,GO:0034637,GO:0042132,GO:0042578,GO:0043933,GO:0044085,GO:0044237,GO:0044238,GO:0044249,GO:0044262,GO:0044281,GO:0044283,GO:0044424,GO:0044444,GO:0044464,GO:0046351,GO:0046364,GO:0050308,GO:0051259,GO:0051260,GO:0051262,GO:0051289,GO:0065003,GO:0071704,GO:0071840,GO:1901135,GO:1901576 3.1.3.11 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008776 421.0
DYD2_k127_4661263_2 Peptidase family M48 - - - 0.000000000000000000000000000000000000001299 160.0
DYD2_k127_4661263_3 Domain of unknown function (DUF3458_C) ARM repeats K01256 - 3.4.11.2 0.0000000000001598 71.0
DYD2_k127_4661263_4 Involved in urease metallocenter assembly. Binds nickel. Probably functions as a nickel donor during metallocenter assembly K03187 - - 0.0001198 51.0
DYD2_k127_4672423_0 Protein of unknown function (DUF1302) - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007387 446.0
DYD2_k127_4672423_1 X-Pro dipeptidyl-peptidase (S15 family) - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003961 444.0
DYD2_k127_4672423_2 Polysaccharide biosynthesis protein K08679 - 5.1.3.6 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001344 374.0
DYD2_k127_4672423_3 Bacterial regulatory proteins, tetR family - - - 0.0000000000000000000006006 104.0
DYD2_k127_4704223_0 - - - - 0.0 1056.0
DYD2_k127_4704223_1 histidine kinase HAMP region domain protein K10715,K20974 - 2.7.13.3 0.00000000000000000125 97.0
DYD2_k127_4706160_0 Belongs to the peptidase M24B family K01262 - 3.4.11.9 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003467 540.0
DYD2_k127_4706160_1 CAAX prenyl protease N-terminal, five membrane helices K06013 - 3.4.24.84 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006963 479.0
DYD2_k127_4706160_10 MATE family multidrug resistance protein K03327 - - 0.0002926 46.0
DYD2_k127_4706160_2 Phosphotransferase K07102 - 2.7.1.221 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000121 382.0
DYD2_k127_4706160_3 3'-to-5' exoribonuclease specific for small oligoribonucleotides K13288 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000007356 283.0
DYD2_k127_4706160_4 Nucleotidyl transferase K00992 - 2.7.7.99 0.00000000000000000000000000000000000000000000000000000000000000000000000000000001609 274.0
DYD2_k127_4706160_5 FAD binding domain K03185 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000003654 267.0
DYD2_k127_4706160_6 One of several proteins that assist in the late maturation steps of the functional core of the 30S ribosomal subunit. Helps release RbfA from mature subunits. May play a role in the assembly of ribosomal proteins into the subunit. Circularly permuted GTPase that catalyzes slow GTP hydrolysis, GTPase activity is stimulated by the 30S ribosomal subunit K06949 - 3.1.3.100 0.000000000000000000000000000000000000000000000000000000000000000000000004815 254.0
DYD2_k127_4706160_7 Nudix hydrolase - - - 0.0000000000000000000000000000000000000000000000000000000000000000004322 234.0
DYD2_k127_4706160_8 diol metabolic process K01724 - 4.2.1.96 0.00000000003704 70.0
DYD2_k127_4706160_9 Converts cobyric acid to cobinamide by the addition of aminopropanol on the F carboxylic group K02227 - 6.3.1.10 0.0000001681 63.0
DYD2_k127_4707023_0 it can initiate unwinding at a nick in the DNA. It binds to the single-stranded DNA and acts in a progressive fashion along the DNA in the 3' to 5' direction K03656 - 3.6.4.12 2.511e-264 829.0
DYD2_k127_4707023_1 Involved in the restart of stalled replication forks. Recognizes and binds the arrested nascent DNA chain at stalled replication forks. It can open the DNA duplex, via its helicase activity, and promote assembly of the primosome and loading of the major replicative helicase DnaB onto DNA K04066 - - 1.507e-194 628.0
DYD2_k127_4707023_2 Catalyzes the decarboxylation of four acetate groups of uroporphyrinogen-III to yield coproporphyrinogen-III K01599 - 4.1.1.37 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000029 506.0
DYD2_k127_4707023_3 Belongs to the short-chain dehydrogenases reductases (SDR) family - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001324 373.0
DYD2_k127_4707023_4 NAD(P)H-binding - - - 0.0000000000000000000000000000000000000000000000000002715 192.0
DYD2_k127_4707023_5 CoA binding domain K06929 - - 0.000000000000000000000002737 105.0
DYD2_k127_4707023_6 cheY-homologous receiver domain - - - 0.000000000000000003359 89.0
DYD2_k127_473344_0 NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient K00331 - 1.6.5.3 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000127 325.0
DYD2_k127_473344_1 NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient K00332 - 1.6.5.3 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000008991 287.0
DYD2_k127_473344_2 NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient K00333 - 1.6.5.3 0.00000000000000000000000000000000000000000000000000000000000000000000000000001335 261.0
DYD2_k127_473344_3 NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient K00330 - 1.6.5.3 0.000000000000000000000000000000000000000000000000000000000008167 210.0
DYD2_k127_473344_4 Involved in the gluconeogenesis. Catalyzes stereospecifically the conversion of dihydroxyacetone phosphate (DHAP) to D-glyceraldehyde-3-phosphate (G3P) K01803 - 5.3.1.1 0.0000000000000000000000000000000000000000000007399 169.0
DYD2_k127_473344_5 Preprotein translocase SecG subunit K03075 - - 0.00000000000000000000000000006091 119.0
DYD2_k127_4745292_0 COG0235 Ribulose-5-phosphate 4-epimerase and related epimerases and aldolases - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006709 379.0
DYD2_k127_4745292_1 NADH flavin oxidoreductase NADH oxidase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001215 363.0
DYD2_k127_4745292_2 Cytochrome C oxidase, cbb3-type, subunit III K05301 - 1.8.2.1 0.00000000000000000000002578 104.0
DYD2_k127_4745292_3 sterol desaturase - - - 0.000000000000156 75.0
DYD2_k127_4751032_0 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain K01652 - 2.2.1.6 3.519e-201 634.0
DYD2_k127_4751032_1 SpoVR family K06415 - - 5.748e-195 619.0
DYD2_k127_4751032_2 Belongs to the UPF0229 family K09786 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006196 423.0
DYD2_k127_4751032_3 TIGRFAM RNA polymerase sigma factor, sigma-70 family K03088 - - 0.00000000000000000000000000000000000000000000000000000000000000134 223.0
DYD2_k127_4751032_4 RDD family - - - 0.00000000000000000000000000000000000001599 149.0
DYD2_k127_4751032_5 PFAM aminotransferase, class I K02225 - - 0.00000000000000000000000000000000001899 148.0
DYD2_k127_4751032_6 Protein of unknown function (DUF3106) - - - 0.0000000000002886 75.0
DYD2_k127_4751032_7 Protein of unknown function (DUF3619) - - - 0.00000009868 60.0
DYD2_k127_4764148_0 Belongs to the ClpA ClpB family K11907 - - 7.943e-259 813.0
DYD2_k127_4764148_1 TIGRFAM type VI secretion protein, VC_A0111 family K11895 - - 0.0000000000009361 74.0
DYD2_k127_4784638_0 transglutaminase domain protein - - - 0.0 1365.0
DYD2_k127_4784638_1 COG1502 Phosphatidylserine phosphatidylglycerophosphate cardiolipi n synthases and related enzymes K06132 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006584 560.0
DYD2_k127_4784638_2 Glutathione S-transferase K11209 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009438 501.0
DYD2_k127_4784638_3 PFAM Penicillin binding protein transpeptidase domain K17838 - 3.5.2.6 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001117 330.0
DYD2_k127_4784638_4 Fe-S assembly protein IscX - GO:0003674,GO:0004857,GO:0005488,GO:0005506,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006790,GO:0008150,GO:0008152,GO:0008198,GO:0009987,GO:0016043,GO:0016226,GO:0022607,GO:0030234,GO:0031163,GO:0043086,GO:0043167,GO:0043169,GO:0044085,GO:0044092,GO:0044237,GO:0044424,GO:0044444,GO:0044464,GO:0046872,GO:0046914,GO:0050790,GO:0051186,GO:0065007,GO:0065009,GO:0071840,GO:0098772 - 0.0000000000000000000000000001754 116.0
DYD2_k127_4784638_5 Pyridoxamine 5'-phosphate oxidase like K00275 - 1.4.3.5 0.000000000000000000000003817 109.0
DYD2_k127_479188_0 Alkane 1-monooxygenase K00496 GO:0003674,GO:0003824,GO:0004497,GO:0008150,GO:0008152,GO:0009056,GO:0009987,GO:0016491,GO:0016705,GO:0016713,GO:0018685,GO:0043446,GO:0043448,GO:0044237,GO:0044248,GO:0055114,GO:0071704,GO:1901575 1.14.15.3 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002679 496.0
DYD2_k127_479188_1 Belongs to the GMC oxidoreductase family - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000001044 273.0
DYD2_k127_479188_2 Thioesterase K07107 - - 0.0000000000000000000000000000000000000000001519 162.0
DYD2_k127_479188_3 COG2207 AraC-type DNA-binding domain-containing proteins - - - 0.000000000001086 70.0
DYD2_k127_4804793_0 Heat shock 70 kDa protein K04043 GO:0000166,GO:0000988,GO:0000989,GO:0003674,GO:0003824,GO:0005488,GO:0005515,GO:0005524,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006457,GO:0006458,GO:0006950,GO:0006986,GO:0008144,GO:0008150,GO:0008270,GO:0009266,GO:0009408,GO:0009628,GO:0009889,GO:0009987,GO:0010033,GO:0010556,GO:0016043,GO:0016462,GO:0016787,GO:0016817,GO:0016818,GO:0016887,GO:0016989,GO:0017076,GO:0017111,GO:0019219,GO:0019222,GO:0022607,GO:0030554,GO:0031323,GO:0031326,GO:0032553,GO:0032555,GO:0032559,GO:0032991,GO:0033554,GO:0034620,GO:0035639,GO:0035966,GO:0035967,GO:0036094,GO:0042221,GO:0043167,GO:0043168,GO:0043169,GO:0043531,GO:0043933,GO:0044085,GO:0044183,GO:0044424,GO:0044444,GO:0044464,GO:0046872,GO:0046914,GO:0050789,GO:0050794,GO:0050896,GO:0051082,GO:0051084,GO:0051085,GO:0051087,GO:0051171,GO:0051252,GO:0051716,GO:0060255,GO:0061077,GO:0065003,GO:0065007,GO:0070887,GO:0071310,GO:0071840,GO:0080090,GO:0097159,GO:0097367,GO:0140110,GO:1901265,GO:1901363,GO:1903506,GO:2001141 - 0.0 1052.0
DYD2_k127_4804793_1 ATP binding to DnaK triggers the release of the substrate protein, thus completing the reaction cycle. Several rounds of ATP-dependent interactions between DnaJ, DnaK and GrpE are required for fully efficient folding. Also involved, together with DnaK and GrpE, in the DNA replication of plasmids through activation of initiation proteins K03686 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000001507 277.0
DYD2_k127_4804793_2 Participates actively in the response to hyperosmotic and heat shock by preventing the aggregation of stress-denatured proteins, in association with DnaK and GrpE. It is the nucleotide exchange factor for DnaK and may function as a thermosensor. Unfolded proteins bind initially to DnaJ K03687 - - 0.0000000000000000000000000000000000000000001424 166.0
DYD2_k127_4804793_3 Catalyzes the ferrous insertion into protoporphyrin IX K01772 - 4.99.1.1,4.99.1.9 0.0000000000000887 73.0
DYD2_k127_4807264_0 COG2355 Zn-dependent dipeptidase, microsomal dipeptidase homolog - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001612 522.0
DYD2_k127_4807264_1 COG0604 NADPH quinone reductase and related Zn-dependent oxidoreductases K00344 - 1.6.5.5 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002502 396.0
DYD2_k127_4807264_10 membrane K08972 - - 0.000000000000000000000000000000006358 131.0
DYD2_k127_4807264_11 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase K00020,K00042 - 1.1.1.31,1.1.1.60 0.000000000000000000000003647 101.0
DYD2_k127_4807264_12 OmpA-like transmembrane domain K03286 - - 0.00004207 51.0
DYD2_k127_4807264_2 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000005829 318.0
DYD2_k127_4807264_3 COG2355 Zn-dependent dipeptidase, microsomal dipeptidase homolog - - - 0.000000000000000000000000000000000000000000000000000000000000000001097 238.0
DYD2_k127_4807264_4 Permeases of the drug metabolite transporter (DMT) superfamily - - - 0.0000000000000000000000000000000000000000000000000000000000000001306 233.0
DYD2_k127_4807264_5 response regulator - - - 0.00000000000000000000000000000000000000000000000000000000001821 219.0
DYD2_k127_4807264_6 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). K03406 - - 0.0000000000000000000000000000000000000000000000000000000000292 229.0
DYD2_k127_4807264_7 3-demethylubiquinone-9 3-O-methyltransferase activity K15257,K18534 - 2.1.1.295 0.00000000000000000000000000000000000000000000000000007467 198.0
DYD2_k127_4807264_8 Sulfite exporter TauE/SafE - - - 0.0000000000000000000000000000000000000000000001945 176.0
DYD2_k127_4807264_9 NMT1-like family K02051 - - 0.000000000000000000000000000000000000000000007735 176.0
DYD2_k127_4808486_0 Endoribonuclease that plays a central role in RNA processing and decay. Required for the maturation of 5S and 16S rRNAs and the majority of tRNAs. Also involved in the degradation of most mRNAs K08300 - 3.1.26.12 8.902e-274 850.0
DYD2_k127_4808486_1 Catalyzes the condensation reaction of fatty acid synthesis by the addition to an acyl acceptor of two carbons from malonyl-ACP K00646,K09458 GO:0003674,GO:0003824,GO:0004312,GO:0004315,GO:0016740,GO:0016746,GO:0016747,GO:0033817 2.3.1.179 2.987e-206 648.0
DYD2_k127_4808486_10 Belongs to the sigma-70 factor family. ECF subfamily K03088 - - 0.000000000000000000000000000000000000000000000000000000003749 202.0
DYD2_k127_4808486_11 Uroporphyrin-III C tetrapyrrole K07056 - 2.1.1.198 0.0000000000000000000000000000000000000000000000000006691 191.0
DYD2_k127_4808486_12 Rieske [2Fe-2S] domain - - - 0.000000000000000000000000000000000073 136.0
DYD2_k127_4808486_13 Carrier of the growing fatty acid chain in fatty acid biosynthesis K02078 - - 0.000000000000000000000000000000004639 130.0
DYD2_k127_4808486_14 Belongs to the bacterial ribosomal protein bL32 family K02911 - - 0.000000000000000000000004144 102.0
DYD2_k127_4808486_15 Uncharacterized ACR, COG1399 K07040 - - 0.00000000009544 70.0
DYD2_k127_4808486_2 Catalyzes the reversible formation of acyl-phosphate (acyl-PO(4)) from acyl- acyl-carrier-protein (acyl-ACP). This enzyme utilizes acyl-ACP as fatty acyl donor, but not acyl-CoA K03621 - 2.3.1.15 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000486 447.0
DYD2_k127_4808486_3 signal peptide peptidase K04773 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002118 400.0
DYD2_k127_4808486_4 Catalyzes the condensation reaction of fatty acid synthesis by the addition to an acyl acceptor of two carbons from malonyl-ACP. Catalyzes the first condensation reaction which initiates fatty acid synthesis and may therefore play a role in governing the total rate of fatty acid production. Possesses both acetoacetyl-ACP synthase and acetyl transacylase activities. Its substrate specificity determines the biosynthesis of branched- chain and or straight-chain of fatty acids K00648 - 2.3.1.180 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004334 391.0
DYD2_k127_4808486_5 malonyl CoA-acyl carrier protein transacylase K00645,K15355 - 2.3.1.39 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006529 352.0
DYD2_k127_4808486_6 reductase K00059 GO:0003674,GO:0003824,GO:0006725,GO:0008150,GO:0008152,GO:0009987,GO:0010130,GO:0016043,GO:0016491,GO:0016614,GO:0016616,GO:0018913,GO:0018915,GO:0022607,GO:0042537,GO:0043933,GO:0044085,GO:0044237,GO:0051259,GO:0051260,GO:0051262,GO:0051289,GO:0055114,GO:0065003,GO:0071704,GO:0071840,GO:1901360 1.1.1.100 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002059 327.0
DYD2_k127_4808486_7 Responsible for synthesis of pseudouridine from uracil K06179 - 5.4.99.24 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003218 322.0
DYD2_k127_4808486_8 HAD-superfamily hydrolase K01091 - 3.1.3.18 0.0000000000000000000000000000000000000000000000000000000000000000000227 239.0
DYD2_k127_4808486_9 Maf-like protein K06287 - - 0.00000000000000000000000000000000000000000000000000000000000000005852 228.0
DYD2_k127_4814612_0 Polysaccharide biosynthesis protein K17716 - 5.1.3.2 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001051 589.0
DYD2_k127_4814612_1 Catalyzes the reversible epimerization at C-2 of UDP-N- acetylglucosamine (UDP-GlcNAc) and thereby provides bacteria with UDP-N-acetylmannosamine (UDP-ManNAc), the activated donor of ManNAc residues K01791,K08068 - 3.2.1.183,5.1.3.14 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001997 342.0
DYD2_k127_4814612_2 Catalyzes the reduction of dTDP-6-deoxy-L-lyxo-4- hexulose to yield dTDP-L-rhamnose K00067 - 1.1.1.133 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000001512 280.0
DYD2_k127_4824222_0 PQQ-like domain K00114 - 1.1.2.8 0.0 1021.0
DYD2_k127_4824222_1 TIGRFAM PQQ-dependent dehydrogenase, methanol ethanol family - - - 1.275e-261 818.0
DYD2_k127_4824222_10 Protein of unknown function (DUF1513) K09947 - - 0.000004514 51.0
DYD2_k127_4824222_2 Sugar (and other) transporter K19577 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001432 445.0
DYD2_k127_4824222_3 Metallo-beta-lactamase superfamily K01138 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002646 317.0
DYD2_k127_4824222_4 Outer membrane protein transport protein (OMPP1/FadL/TodX) K06076 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008577 321.0
DYD2_k127_4824222_5 Membrane transport protein K07088 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000004836 303.0
DYD2_k127_4824222_6 Sulphur oxidation protein SoxZ K17226 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000006966 287.0
DYD2_k127_4824222_7 Transport permease protein K01992 - - 0.00000000000000000000000000000000000000000000000000006393 197.0
DYD2_k127_4824222_8 PBP superfamily domain K07219 - - 0.0000000000000000000000000000000000002635 155.0
DYD2_k127_4824222_9 ABC-type multidrug transport system ATPase component K01990 - - 0.000000000000000000000002247 107.0
DYD2_k127_4826805_0 acyl-CoA dehydrogenase K20035 - - 3.73e-270 843.0
DYD2_k127_4826805_1 Belongs to the cysteine synthase cystathionine beta- synthase family K12339 GO:0000003,GO:0000096,GO:0000097,GO:0000902,GO:0000904,GO:0003006,GO:0003674,GO:0003824,GO:0004124,GO:0005488,GO:0005575,GO:0005576,GO:0005622,GO:0005623,GO:0005634,GO:0005737,GO:0005773,GO:0005774,GO:0005777,GO:0005829,GO:0005886,GO:0006082,GO:0006520,GO:0006534,GO:0006535,GO:0006563,GO:0006790,GO:0006807,GO:0007568,GO:0008144,GO:0008150,GO:0008152,GO:0008652,GO:0009058,GO:0009069,GO:0009070,GO:0009507,GO:0009532,GO:0009536,GO:0009566,GO:0009567,GO:0009570,GO:0009653,GO:0009826,GO:0009856,GO:0009860,GO:0009932,GO:0009987,GO:0010035,GO:0010038,GO:0016020,GO:0016043,GO:0016049,GO:0016053,GO:0016740,GO:0016765,GO:0019344,GO:0019752,GO:0019842,GO:0019953,GO:0022414,GO:0030154,GO:0030170,GO:0031090,GO:0032501,GO:0032502,GO:0032989,GO:0036094,GO:0040007,GO:0042221,GO:0042579,GO:0043167,GO:0043168,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0043436,GO:0044237,GO:0044238,GO:0044249,GO:0044272,GO:0044281,GO:0044283,GO:0044422,GO:0044424,GO:0044434,GO:0044435,GO:0044437,GO:0044444,GO:0044446,GO:0044464,GO:0044703,GO:0044706,GO:0046394,GO:0046686,GO:0048037,GO:0048046,GO:0048468,GO:0048588,GO:0048589,GO:0048856,GO:0048868,GO:0048869,GO:0050662,GO:0050896,GO:0051704,GO:0060560,GO:0070279,GO:0071704,GO:0071840,GO:0071944,GO:0097159,GO:0098588,GO:0098805,GO:1901363,GO:1901564,GO:1901566,GO:1901576,GO:1901605,GO:1901607 2.5.1.47 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004407 475.0
DYD2_k127_4826805_2 Electron transfer flavoprotein K03522 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001402 467.0
DYD2_k127_4826805_3 Electron transfer flavoprotein K03521 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003108 410.0
DYD2_k127_4826805_4 PFAM histone deacetylase superfamily - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006527 322.0
DYD2_k127_4826805_5 lytic murein transglycosylase B K08305 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000002339 293.0
DYD2_k127_4826805_6 Reversible hydration of carbon dioxide K01673 - 4.2.1.1 0.0000000000000000000000000000000000000000000000005453 183.0
DYD2_k127_4834700_0 efflux pump K18138,K18146 - - 0.0 1371.0
DYD2_k127_4834700_1 Belongs to the outer membrane factor (OMF) (TC 1.B.17) family - - - 0.0009325 46.0
DYD2_k127_4835043_0 MMPL family K07003 - - 3.806e-312 975.0
DYD2_k127_4835043_1 Protein of unknown function (DUF1329) - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001173 572.0
DYD2_k127_4835043_2 NmrA-like family - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003344 505.0
DYD2_k127_4835043_3 Protein of unknown function (DUF1302) - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004907 477.0
DYD2_k127_4835043_4 Beta-lactamase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006511 384.0
DYD2_k127_4835043_5 Succinylglutamate desuccinylase / Aspartoacylase family - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000531 378.0
DYD2_k127_4835043_6 alpha/beta hydrolase fold K01432 - 3.5.1.9 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001584 310.0
DYD2_k127_4835043_7 Photosynthesis system II assembly factor YCF48 - - - 0.0000000000000000000000000000000000000000000000000000000000000000000004204 252.0
DYD2_k127_4835043_8 TIGRFAM Methylated-DNA- protein -cysteine S-methyltransferase, DNA binding K10778 - 2.1.1.63 0.0000000000000000000000000000000000000000000000000000000000000000002957 239.0
DYD2_k127_4835043_9 response regulator receiver K03415 - - 0.0000000000000009189 80.0
DYD2_k127_4835950_0 Required for the formation of a threonylcarbamoyl group on adenosine at position 37 (t(6)A37) in tRNAs that read codons beginning with adenine. Is involved in the transfer of the threonylcarbamoyl moiety of threonylcarbamoyl-AMP (TC-AMP) to the N6 group of A37, together with TsaE and TsaB. TsaD likely plays a direct catalytic role in this reaction K01409 - 2.3.1.234 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002177 419.0
DYD2_k127_4835950_1 dipeptidyl-peptidase activity K01990 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007375 329.0
DYD2_k127_4847130_0 lyase activity K01932 - - 0.0 1076.0
DYD2_k127_4847130_1 Catalyzes the synthesis of 5,6-dihydrouridine (D), a modified base found in the D-loop of most tRNAs, via the reduction of the C5-C6 double bond in target uridines. Specifically modifies U20 and U20a in tRNAs K05539 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009944 404.0
DYD2_k127_4847130_2 FAD linked oxidases, C-terminal domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003994 399.0
DYD2_k127_4847866_0 Transposase K00507 - 1.14.19.1 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001073 494.0
DYD2_k127_4864802_0 - - - - 0.000000000000000000000001634 104.0
DYD2_k127_4864802_1 - - - - 0.0000000000000000000002159 101.0
DYD2_k127_4864802_3 tail collar domain protein - - - 0.0000000000000002839 93.0
DYD2_k127_4864802_5 Collagen triple helix repeat - - - 0.000000000000002643 90.0
DYD2_k127_4864802_7 - - - - 0.0000001527 60.0
DYD2_k127_4870340_0 Phosphoribosylformylglycinamidine synthase involved in the purines biosynthetic pathway. Catalyzes the ATP-dependent conversion of formylglycinamide ribonucleotide (FGAR) and glutamine to yield formylglycinamidine ribonucleotide (FGAM) and glutamate K01952 GO:0000166,GO:0000287,GO:0003674,GO:0003824,GO:0004642,GO:0005488,GO:0005524,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006139,GO:0006163,GO:0006164,GO:0006725,GO:0006753,GO:0006793,GO:0006796,GO:0006807,GO:0008144,GO:0008150,GO:0008152,GO:0009058,GO:0009117,GO:0009165,GO:0009987,GO:0016874,GO:0016879,GO:0016884,GO:0017076,GO:0018130,GO:0019438,GO:0019637,GO:0030554,GO:0032553,GO:0032555,GO:0032559,GO:0034641,GO:0034654,GO:0035639,GO:0036094,GO:0043167,GO:0043168,GO:0043169,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0044424,GO:0044464,GO:0046483,GO:0046872,GO:0055086,GO:0071704,GO:0072521,GO:0072522,GO:0090407,GO:0097159,GO:0097367,GO:1901265,GO:1901293,GO:1901360,GO:1901362,GO:1901363,GO:1901564,GO:1901566,GO:1901576 6.3.5.3 0.0 1431.0
DYD2_k127_4870340_1 The UvrABC repair system catalyzes the recognition and processing of DNA lesions. UvrC both incises the 5' and 3' sides of the lesion. The N-terminal half is responsible for the 3' incision and the C-terminal half is responsible for the 5' incision K03703 - - 3.034e-248 782.0
DYD2_k127_4870340_2 esterase of the alpha-beta hydrolase superfamily K07001 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003928 415.0
DYD2_k127_4870340_3 Protein of unknown function (DUF3422) - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009392 323.0
DYD2_k127_4870340_4 Belongs to the CDP-alcohol phosphatidyltransferase class-I family K00995,K08744 - 2.7.8.41,2.7.8.5 0.0000000000000000000000000000000000000000000000000000000000000000000000000008855 258.0
DYD2_k127_4870340_5 Uracil DNA glycosylase superfamily K21929 - 3.2.2.27 0.0000000000000000000000000000000000000000000000000000000000000000000003357 244.0
DYD2_k127_4870340_6 ErfK ybiS ycfS ynhG family protein - - - 0.0000000000000000000000000000000000000000000000000000000001084 211.0
DYD2_k127_4870340_7 haemagglutination activity domain - - - 0.000000000000000000000000000000001382 140.0
DYD2_k127_4873487_0 Belongs to the ClpA ClpB family K03694 - - 5.297e-284 883.0
DYD2_k127_4873487_1 TIGRFAM isocitrate dehydrogenase, NADP-dependent K00031 GO:0003674,GO:0003824,GO:0003862,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006082,GO:0006520,GO:0006551,GO:0006807,GO:0008150,GO:0008152,GO:0008652,GO:0009058,GO:0009081,GO:0009082,GO:0009098,GO:0009987,GO:0016053,GO:0016491,GO:0016614,GO:0016616,GO:0019752,GO:0043436,GO:0044237,GO:0044238,GO:0044249,GO:0044281,GO:0044283,GO:0044424,GO:0044444,GO:0044464,GO:0046394,GO:0055114,GO:0071704,GO:1901564,GO:1901566,GO:1901576,GO:1901605,GO:1901607 1.1.1.42 4.799e-242 753.0
DYD2_k127_4873487_2 Destroys radicals which are normally produced within the cells and which are toxic to biological systems K03601,K04564 GO:0000302,GO:0000303,GO:0000305,GO:0003674,GO:0003824,GO:0004784,GO:0006801,GO:0006950,GO:0006979,GO:0008150,GO:0008152,GO:0009636,GO:0009987,GO:0010035,GO:0016209,GO:0016491,GO:0016721,GO:0019430,GO:0033554,GO:0034599,GO:0034614,GO:0042221,GO:0044237,GO:0050896,GO:0051716,GO:0055114,GO:0070887,GO:0071450,GO:0071451,GO:0072593,GO:0097237,GO:0098754,GO:0098869,GO:1901700,GO:1901701,GO:1990748 1.15.1.1,3.1.11.6 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004871 359.0
DYD2_k127_4873487_3 Bidirectionally degrades single-stranded DNA into large acid-insoluble oligonucleotides, which are then degraded further into small acid-soluble oligonucleotides K03601 - 3.1.11.6 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006032 324.0
DYD2_k127_4873487_4 MotA/TolQ/ExbB proton channel family K03561 - - 0.000000000000000000000000000000000000000001076 165.0
DYD2_k127_4873487_5 Involved in the modulation of the specificity of the ClpAP-mediated ATP-dependent protein degradation K06891 - - 0.0000000000000000000000000000000000000008403 151.0
DYD2_k127_4873487_6 Uncharacterized ACR, COG1430 K09005 - - 0.0000000000000000000000000000001173 129.0
DYD2_k127_4873487_7 Cold shock protein K03704 - - 0.000000000000000000000000000005335 123.0
DYD2_k127_4881606_0 Catalyzes the ATP-dependent conversion of 5- aminoimidazole ribonucleotide (AIR) and HCO(3)(-) to N5- carboxyaminoimidazole ribonucleotide (N5-CAIR) K01589 - 6.3.4.18 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003247 435.0
DYD2_k127_4881606_1 Required for the formation of a threonylcarbamoyl group on adenosine at position 37 (t(6)A37) in tRNAs that read codons beginning with adenine K07566 - 2.7.7.87 0.0000000000000000000000000000000000000000000000000000000000000000008537 239.0
DYD2_k127_4881606_2 Catalyzes the conversion of N5-carboxyaminoimidazole ribonucleotide (N5-CAIR) to 4-carboxy-5-aminoimidazole ribonucleotide (CAIR) K01588 - 5.4.99.18 0.000000000000004593 76.0
DYD2_k127_4893970_0 helix_turn_helix, cAMP Regulatory protein K10914 - - 0.000000000000000000000000000000000000000000000000000000000000001537 229.0
DYD2_k127_4893970_1 Major Facilitator Superfamily - - - 0.0000000000000000000000000000000000000000000000000000000000006837 218.0
DYD2_k127_4893970_2 Protein of unknown function (DUF962) - - - 0.000000000000000000000000000000000000000000000000000000000788 206.0
DYD2_k127_4893970_3 Domain of unknown function (DUF4394) - - - 0.0000000000000000000000000000000000000000000000000473 197.0
DYD2_k127_4893970_4 - - - - 0.0000000000000000004391 98.0
DYD2_k127_4893970_5 Domain of unknown function (DUF1840) - - - 0.00000000000004825 76.0
DYD2_k127_4912754_0 Enoyl-CoA hydratase/isomerase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008943 400.0
DYD2_k127_4912754_1 Metallo-beta-lactamase superfamily - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001525 334.0
DYD2_k127_4912754_2 GDSL-like Lipase/Acylhydrolase family - - - 0.0000000000000000000000000000000000000000000000000001753 196.0
DYD2_k127_4928064_0 Adds poly(A) tail to the 3' end of many RNAs, which usually targets these RNAs for decay. Plays a significant role in the global control of gene expression, through influencing the rate of transcript degradation, and in the general RNA quality control K00970 - 2.7.7.19 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002018 527.0
DYD2_k127_4928064_1 HAD-superfamily hydrolase, subfamily IB (PSPase-like) - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000001788 276.0
DYD2_k127_4928064_2 2-amino-4-hydroxy-6-hydroxymethyldihydropteridine pyrophosphokinase K00950 - 2.7.6.3 0.000000000000000000000000000000002319 138.0
DYD2_k127_4928064_3 Deoxynucleoside kinase - - - 0.00000005923 55.0
DYD2_k127_4928064_4 Belongs to the DnaA family K10763 - - 0.00003922 47.0
DYD2_k127_4944252_0 Aldehyde ferredoxin oxidoreductase K03738 - 1.2.7.5 0.0 1007.0
DYD2_k127_4944252_1 Sigma-54 interaction domain K21405 - - 9.718e-222 715.0
DYD2_k127_4944252_2 PFAM FAD-dependent pyridine nucleotide-disulphide oxidoreductase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001251 512.0
DYD2_k127_4944252_3 PFAM 4Fe-4S ferredoxin iron-sulfur binding domain protein K05796 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007043 308.0
DYD2_k127_4944252_4 Forms passive diffusion pores that allow small molecular weight hydrophilic materials across the outer membrane - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000003633 273.0
DYD2_k127_4944252_5 extracellular solute-binding protein, family 3 - - - 0.00000000000000000000000000000000000000000000000000005662 198.0
DYD2_k127_4944252_6 Cytochrome C oxidase, cbb3-type, subunit III - - - 0.0000000000000000000000000000000000000000000000009344 178.0
DYD2_k127_4947810_0 Catalyzes the reversible interconversion of isobutyryl- CoA and n-butyryl-CoA, using radical chemistry. Also exhibits GTPase activity, associated with its G-protein domain (MeaI) that functions as a chaperone that assists cofactor delivery and proper holo-enzyme assembly K11942 GO:0000166,GO:0000287,GO:0001882,GO:0001883,GO:0003674,GO:0003824,GO:0003924,GO:0005488,GO:0005525,GO:0006139,GO:0006163,GO:0006637,GO:0006725,GO:0006732,GO:0006753,GO:0006790,GO:0006793,GO:0006796,GO:0006807,GO:0008144,GO:0008150,GO:0008152,GO:0009117,GO:0009150,GO:0009259,GO:0009987,GO:0016462,GO:0016787,GO:0016817,GO:0016818,GO:0016853,GO:0016866,GO:0017076,GO:0017111,GO:0019001,GO:0019637,GO:0019693,GO:0019842,GO:0031419,GO:0032549,GO:0032550,GO:0032553,GO:0032555,GO:0032561,GO:0033865,GO:0033875,GO:0034032,GO:0034641,GO:0034784,GO:0035383,GO:0035639,GO:0036094,GO:0043167,GO:0043168,GO:0043169,GO:0043603,GO:0044237,GO:0044238,GO:0044281,GO:0046483,GO:0046872,GO:0046906,GO:0047727,GO:0048037,GO:0051186,GO:0055086,GO:0071704,GO:0072521,GO:0097159,GO:0097367,GO:1901135,GO:1901265,GO:1901360,GO:1901363,GO:1901564 5.4.99.13 0.0 1144.0
DYD2_k127_4951095_0 Mur ligase family, glutamate ligase domain - - - 0.0 1234.0
DYD2_k127_4951095_1 Transcriptional regulator - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002359 357.0
DYD2_k127_4951095_2 [2Fe-2S] binding domain K07302 - 1.3.99.16 0.00000000000000000000000000000000000000000000000000000000000000000000000000001538 261.0
DYD2_k127_4951095_3 Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain K07303 - 1.3.99.16 0.0000000000000000000000000000000000000000000000000000000000000000000000000008862 258.0
DYD2_k127_4951095_4 Alpha/beta hydrolase family - - - 0.000000000000000000000000000000000000000000000000000000000000000001849 237.0
DYD2_k127_4951095_5 - - - - 0.0000000000000134 76.0
DYD2_k127_4951095_6 Catalyzes the conversion of glucosamine-6-phosphate to glucosamine-1-phosphate K03431 - 5.4.2.10 0.00000000000005867 73.0
DYD2_k127_4974389_0 Peptidase M61 - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002491 537.0
DYD2_k127_4974389_1 alcohol dehydrogenase K19745 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003294 455.0
DYD2_k127_4974389_2 Belongs to the enoyl-CoA hydratase isomerase family K01692,K01715 - 4.2.1.17 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001323 411.0
DYD2_k127_4974389_3 Catalyzes the transfer of the phosphoribosyl group of 5- phosphorylribose-1-pyrophosphate (PRPP) to anthranilate to yield N-(5'-phosphoribosyl)-anthranilate (PRA) K00766 - 2.4.2.18 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002275 367.0
DYD2_k127_4974389_4 Belongs to the TrpC family K01609 GO:0003674,GO:0003824,GO:0004425,GO:0016829,GO:0016830,GO:0016831 4.1.1.48 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002826 312.0
DYD2_k127_4974389_5 FAD binding domain of DNA photolyase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002212 317.0
DYD2_k127_4974389_6 anthranilate K01658 - 4.1.3.27 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000001535 297.0
DYD2_k127_4974389_7 Short-chain dehydrogenase reductase (SDR) - - - 0.0000000000000000000000000000000000000000000000000004525 192.0
DYD2_k127_4974389_8 Protein of unknown function (DUF3429) - - - 0.000000000000000003943 90.0
DYD2_k127_4991738_0 Belongs to the pyruvate kinase family K00873 - 2.7.1.40 8.634e-198 627.0
DYD2_k127_4991738_1 Belongs to the phosphoglycerate kinase family K00927 GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0044424,GO:0044464 2.7.2.3 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001545 566.0
DYD2_k127_4991738_2 Fructose-bisphosphate aldolase, class II, Calvin cycle subtype K01624 - 4.1.2.13 0.0000000000000000000000000000000000000000000000000000000000000000000000000000002512 267.0
DYD2_k127_4991738_3 Subtilase family K14645 - - 0.00000000000000001509 93.0
DYD2_k127_4991738_4 Rhomboid family - - - 0.0000000000001586 79.0
DYD2_k127_500678_0 Belongs to the NAD(P)-dependent epimerase dehydratase family. dTDP-glucose dehydratase subfamily K01710 - 4.2.1.46 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000446 540.0
DYD2_k127_5007802_0 amino acids such as valine, to avoid such errors it has two additional distinct tRNA(Ile)-dependent editing activities. One activity is designated as 'pretransfer' editing and involves the hydrolysis of activated Val-AMP. The other activity is designated 'posttransfer' editing and involves deacylation of mischarged Val-tRNA(Ile) K01870 - 6.1.1.5 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004913 379.0
DYD2_k127_5007802_1 Belongs to the ribF family K11753 - 2.7.1.26,2.7.7.2 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000008698 302.0
DYD2_k127_5007802_2 Catalyzes the transfer of a formyl group from 10- formyltetrahydrofolate to 5-phospho-ribosyl-glycinamide (GAR), producing 5-phospho-ribosyl-N-formylglycinamide (FGAR) and tetrahydrofolate K11175 - 2.1.2.2 0.0000000000000000000000000000000000000000000000000000000000000000000005329 243.0
DYD2_k127_5009247_0 TIGRFAM Lipoprotein releasing system, transmembrane protein, LolC E family K09808 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001546 484.0
DYD2_k127_5009247_1 PFAM TatD-related deoxyribonuclease K03424 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007778 317.0
DYD2_k127_5009247_2 Part of the ABC transporter complex LolCDE involved in the translocation of mature outer membrane-directed lipoproteins, from the inner membrane to the periplasmic chaperone, LolA. Responsible for the formation of the LolA-lipoprotein complex in an ATP-dependent manner K09810 - - 0.000000000000000000000000000000000000000000000000000000000000000001265 235.0
DYD2_k127_5009247_3 Uncharacterized protein conserved in bacteria (DUF2062) K09928 - - 0.000000000000000000000000000000000000003464 156.0
DYD2_k127_5009247_4 DNA internalization-related competence protein ComEC Rec2 K02238 - - 0.0000000000000000000000000000000000004224 156.0
DYD2_k127_5009247_5 Protein conserved in bacteria - - - 0.00000000000004805 83.0
DYD2_k127_501802_0 DNA polymerase alpha chain like domain K07053 GO:0003674,GO:0003824,GO:0005488,GO:0006793,GO:0006796,GO:0008150,GO:0008152,GO:0009987,GO:0016311,GO:0016787,GO:0016788,GO:0016791,GO:0030145,GO:0042578,GO:0043167,GO:0043169,GO:0044237,GO:0046872,GO:0046914,GO:0097657 3.1.3.97 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002631 364.0
DYD2_k127_501802_1 Protein of unknown function (DUF455) - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000003883 286.0
DYD2_k127_501802_2 Bacterial transferase hexapeptide (six repeats) - - - 0.000000000000000000000000000000000000000004846 156.0
DYD2_k127_5020429_0 The transhydrogenation between NADH and NADP is coupled to respiration and ATP hydrolysis and functions as a proton pump across the membrane K00325 - 1.6.1.2 5.218e-246 766.0
DYD2_k127_5020429_1 PFAM Alanine dehydrogenase PNT K00324 - 1.6.1.2 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005943 535.0
DYD2_k127_5020429_2 Periplasmic binding protein K02016,K06858 - - 0.00000000000000000000000000000000000000000000000000000000000003188 226.0
DYD2_k127_5020429_3 4TM region of pyridine nucleotide transhydrogenase, mitoch K00324 - 1.6.1.2 0.000000000000000000000000000000000000000000002038 166.0
DYD2_k127_5020429_4 receptor K02014 - - 0.00000000000002341 83.0
DYD2_k127_5036249_0 ABC transporter K01990 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001445 373.0
DYD2_k127_5036249_1 PFAM VacJ family lipoprotein K04754 - - 0.0000000000000000000000000000000000000000000000000000000000000000001708 239.0
DYD2_k127_5036249_2 ABC-type transport system involved in resistance to organic solvents, periplasmic component K02067 - - 0.0000000000000000000000000000000000000000000000000000000000378 208.0
DYD2_k127_5036249_3 Permease MlaE K02066 - - 0.000000000000000000000000000000000000000000000000000000003051 201.0
DYD2_k127_5036249_4 toluene tolerance K07323 - - 0.00000000000000000000000000000000000000000000000003331 185.0
DYD2_k127_5036249_5 STAS domain K07122 - - 0.0000001043 56.0
DYD2_k127_5092029_0 Aspartyl-tRNA synthetase with relaxed tRNA specificity since it is able to aspartylate not only its cognate tRNA(Asp) but also tRNA(Asn). Reaction proceeds in two steps L-aspartate is first activated by ATP to form Asp-AMP and then transferred to the acceptor end of tRNA(Asp Asn) K01876 - 6.1.1.12 1.595e-230 719.0
DYD2_k127_5092029_1 Protein of unknown function (DUF502) - - - 0.000000000000000000000000000000000000000000000000000000000002057 218.0
DYD2_k127_5092029_2 Regulatory protein, FmdB family - - - 0.00000000000000000000000000000000003169 136.0
DYD2_k127_5112262_0 Plays a role in the regulation of phosphate uptake K02039 - - 0.000000000000000000000000000000000000000000000000000000000000000000000004061 249.0
DYD2_k127_5112262_1 Could be a mediator in iron transactions between iron acquisition and iron-requiring processes, such as synthesis and or repair of Fe-S clusters in biosynthetic enzymes - - - 0.000000000000000000000000000000000000000000004607 164.0
DYD2_k127_5112262_2 Key enzyme in folate metabolism. Catalyzes an essential reaction for de novo glycine and purine synthesis, and for DNA precursor synthesis K00287 - 1.5.1.3 0.0000000000002158 74.0
DYD2_k127_5112262_3 - - - - 0.0000000002232 65.0
DYD2_k127_5113609_0 phosphodiesterase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002178 331.0
DYD2_k127_5113609_1 Catalyzes the oxidation of L-aspartate to iminoaspartate K00278 - 1.4.3.16 0.00000000000000000000000000000000000000000000000000000000000000000011 235.0
DYD2_k127_5151765_0 Carbamoyl-phosphate synthetase glutamine chain K01956 - 6.3.5.5 0.00000000000000000000000000000000000000000000000000000000000000000000000005459 254.0
DYD2_k127_5151765_1 Bile acid sodium symporter K03453 - - 0.0000000000000000000000000000000000000000000000000000000000000000006222 238.0
DYD2_k127_5160949_0 DNA photolyase K01669 - 4.1.99.3 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002925 409.0
DYD2_k127_5160949_1 Bifunctional serine threonine kinase and phosphorylase involved in the regulation of the phosphoenolpyruvate synthase (PEPS) by catalyzing its phosphorylation dephosphorylation K09773 - 2.7.11.33,2.7.4.28 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001012 395.0
DYD2_k127_5180225_0 Acyl-CoA synthetases (AMP-forming) AMP-acid ligases II - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005441 619.0
DYD2_k127_5180225_1 Nuclease-related domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002084 392.0
DYD2_k127_5180225_2 acetyltransferases and hydrolases with the alpha beta hydrolase fold K01046 - 3.1.1.3 0.00000000000000000000000000000000000000002462 164.0
DYD2_k127_5180225_3 Glycine zipper - - - 0.0000000005284 68.0
DYD2_k127_5185388_0 Dienelactone hydrolase K01061 - 3.1.1.45 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001447 388.0
DYD2_k127_5185388_1 NAD(P)H-dependent FMN reductase K11811 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007656 356.0
DYD2_k127_5185388_2 Putative amidoligase enzyme - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000003226 302.0
DYD2_k127_5185388_3 TIGRFAM molybdenum ABC transporter, periplasmic molybdate-binding protein K02020 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000002782 258.0
DYD2_k127_5185388_4 redox protein, regulator of disulfide bond formation - - - 0.00000000000000000000000000000000000000000000000000000000000004945 216.0
DYD2_k127_5185388_5 glutamine amidotransferases K07010 - - 0.000000000000000000000000000000000000000000000000000000001934 207.0
DYD2_k127_5185388_6 SNARE associated Golgi protein - - - 0.0000000000000000000000000000000000000000000000000000001253 197.0
DYD2_k127_5185388_7 Transcriptional regulator - - - 0.00000000000000000000000000000000000000000000000521 175.0
DYD2_k127_5186671_0 Putative S-adenosyl-L-methionine-dependent methyltransferase - - - 0.00000000000000000000000000308 116.0
DYD2_k127_5186671_1 Catalyzes the phosphorylation of pantothenate (Pan), the first step in CoA biosynthesis K03525 - 2.7.1.33 0.0000000000009361 74.0
DYD2_k127_5186671_2 PFAM Sporulation domain protein - - - 0.00001286 55.0
DYD2_k127_521024_0 Methyl-accepting chemotaxis protein K03406 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000001117 292.0
DYD2_k127_521024_1 Presumably involved in the processing and regular turnover of intracellular proteins. Catalyzes the removal of unsubstituted N-terminal amino acids from various peptides K01255 GO:0003674,GO:0003824,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005739,GO:0006508,GO:0006807,GO:0008150,GO:0008152,GO:0008233,GO:0016787,GO:0019538,GO:0019904,GO:0043170,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0044238,GO:0044424,GO:0044444,GO:0044464,GO:0071704,GO:0097718,GO:0140096,GO:1901564 3.4.11.1 0.000000000000000000000000000000000000000000000000000000000000005721 217.0
DYD2_k127_521024_2 DNA polymerase III (Chi subunit) K02339 - 2.7.7.7 0.000000000000000000000000000000000000000005583 158.0
DYD2_k127_5218469_0 - - - - 1.039e-260 817.0
DYD2_k127_5222752_0 PFAM ABC transporter K06158 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008965 544.0
DYD2_k127_5222752_1 Belongs to the transferase hexapeptide repeat family K00674 - 2.3.1.117 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002412 384.0
DYD2_k127_5222752_2 Specifically methylates the 50S ribosomal protein L3 on a specific glutamine residue K07320 - 2.1.1.298 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008475 340.0
DYD2_k127_5222752_3 Amp-dependent synthetase and ligase K01897 - 6.2.1.3 0.000000000000000000000000000000000000002229 153.0
DYD2_k127_5222752_4 Belongs to the ArsC family K00537 - 1.20.4.1 0.0000000000000000000000000000209 121.0
DYD2_k127_5234707_0 Belongs to the FAD-dependent oxidoreductase 2 family. FRD SDH subfamily K00239 GO:0000104,GO:0000166,GO:0003674,GO:0003824,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005886,GO:0006082,GO:0006091,GO:0006099,GO:0006101,GO:0008150,GO:0008152,GO:0009055,GO:0009060,GO:0009061,GO:0009987,GO:0015980,GO:0016020,GO:0016491,GO:0016627,GO:0016999,GO:0017144,GO:0019752,GO:0022900,GO:0032991,GO:0036094,GO:0043167,GO:0043168,GO:0043436,GO:0044237,GO:0044238,GO:0044281,GO:0044424,GO:0044425,GO:0044459,GO:0044464,GO:0045273,GO:0045274,GO:0045281,GO:0045282,GO:0045333,GO:0048037,GO:0050660,GO:0050662,GO:0055114,GO:0070469,GO:0070470,GO:0071704,GO:0071944,GO:0072350,GO:0097159,GO:0098796,GO:0098797,GO:0098803,GO:1901265,GO:1901363,GO:1902494,GO:1990204 1.3.5.1,1.3.5.4 0.0 1022.0
DYD2_k127_5234707_1 SdhA B are the catalytic subcomplex and can exhibit succinate dehydrogenase activity in the absence of SdhC D which are the membrane components and form cytochrome b556 K00240 GO:0003674,GO:0003824,GO:0005488,GO:0005575,GO:0005623,GO:0005886,GO:0006091,GO:0008150,GO:0008152,GO:0009055,GO:0009060,GO:0009987,GO:0015980,GO:0016020,GO:0016491,GO:0022900,GO:0022904,GO:0044237,GO:0044464,GO:0045333,GO:0048037,GO:0051536,GO:0051537,GO:0051538,GO:0051539,GO:0051540,GO:0055114,GO:0071944 1.3.5.1,1.3.5.4 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003537 461.0
DYD2_k127_5234707_2 Succinate dehydrogenase/Fumarate reductase transmembrane subunit K00241 - - 0.0000000000000000000000000000000000000000000000009174 179.0
DYD2_k127_5234707_3 succinate dehydrogenase, hydrophobic membrane anchor protein K00242 - - 0.00000000000000000000000000000000000000000001979 166.0
DYD2_k127_5234707_4 GntR family K03710 - - 0.0000000000000000000000000000002788 124.0
DYD2_k127_5234707_5 Flavinator of succinate dehydrogenase K09159 - - 0.00000000000000000000000000002886 118.0
DYD2_k127_5248864_0 Phosphorolytic exoribonuclease that removes nucleotide residues following the -CCA terminus of tRNA and adds nucleotides to the ends of RNA molecules by using nucleoside diphosphates as substrates K00989 - 2.7.7.56 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001789 334.0
DYD2_k127_5248864_1 Pyrophosphatase that catalyzes the hydrolysis of nucleoside triphosphates to their monophosphate derivatives, with a high preference for the non-canonical purine nucleotides XTP (xanthosine triphosphate), dITP (deoxyinosine triphosphate) and ITP. Seems to function as a house-cleaning enzyme that removes non-canonical purine nucleotides from the nucleotide pool, thus preventing their incorporation into DNA RNA and avoiding chromosomal lesions K02428 - 3.6.1.66 0.00000000000000000000000000000000000000000000000000000000000000000000000004389 254.0
DYD2_k127_5248864_2 Involved in the biosynthesis of porphyrin-containing compound - GO:0003674,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006725,GO:0006778,GO:0006779,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009987,GO:0018130,GO:0019438,GO:0033013,GO:0033014,GO:0034641,GO:0044237,GO:0044249,GO:0044271,GO:0044424,GO:0044464,GO:0046483,GO:0048037,GO:0051186,GO:0051188,GO:0051536,GO:0051539,GO:0051540,GO:0071704,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576 - 0.000000000000008515 75.0
DYD2_k127_5296577_0 Esterase of the alpha-beta hydrolase superfamily - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000007423 269.0
DYD2_k127_5296577_1 The natural substrate for this enzyme may be peptidyl- tRNAs which drop off the ribosome during protein synthesis K01056 - 3.1.1.29 0.00000000000000000000000000000000000000000000000000000000000000000000003795 245.0
DYD2_k127_5296577_2 ATPase that binds to both the 70S ribosome and the 50S ribosomal subunit in a nucleotide-independent manner K06942 - - 0.000000000000000000000000000000001451 129.0
DYD2_k127_5296577_3 Catalyzes the condensation of the acetyl group of acetyl-CoA with 3-methyl-2-oxobutanoate (2-oxoisovalerate) to form 3-carboxy-3-hydroxy-4-methylpentanoate (2-isopropylmalate) K01649 - 2.3.3.13 0.0008282 42.0
DYD2_k127_5325416_0 UPF0761 membrane protein K07058 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000002081 286.0
DYD2_k127_5325416_1 Belongs to the WrbA family K03809 - 1.6.5.2 0.0000000000000000000000000000000000000000000000000000000000000000000000000000001557 269.0
DYD2_k127_5325416_2 RNA chaperone that binds small regulatory RNA (sRNAs) and mRNAs to facilitate mRNA translational regulation in response to envelope stress, environmental stress and changes in metabolite concentrations. Also binds with high specificity to tRNAs K03666 - - 0.0000000000000000000000000000000000002646 141.0
DYD2_k127_5325416_3 Predicted membrane protein (DUF2069) - - - 0.00000000000000000000000001663 113.0
DYD2_k127_5339576_0 RimK-like ATP-grasp domain K03802 - 6.3.2.29,6.3.2.30 2.251e-214 688.0
DYD2_k127_5339576_1 Belongs to the MurCDEF family K03802 - 6.3.2.29,6.3.2.30 0.000000000000000000000000000000000000000000000000000000000000000000000000000000004525 277.0
DYD2_k127_5339576_2 ABC transporter K06147 - - 0.00000000000000000000000000000000000001125 154.0
DYD2_k127_5342033_0 Catalyzes the acyloin condensation reaction between C atoms 2 and 3 of pyruvate and glyceraldehyde 3-phosphate to yield 1-deoxy-D-xylulose-5-phosphate (DXP) K01662 - 2.2.1.7 1.201e-293 914.0
DYD2_k127_5342033_1 Converts GTP to 7,8-dihydroneopterin triphosphate K09007 - 3.5.4.16 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001167 317.0
DYD2_k127_5342033_2 Belongs to the FPP GGPP synthase family K00795 - 2.5.1.1,2.5.1.10 0.000000000000000000000000000000000000000000000000000000000000000000000001059 255.0
DYD2_k127_5342033_3 Bidirectionally degrades single-stranded DNA into large acid-insoluble oligonucleotides, which are then degraded further into small acid-soluble oligonucleotides K03602 - 3.1.11.6 0.000000000004367 69.0
DYD2_k127_5342033_4 Protein of unknown function (DUF3579) - - - 0.000000001897 60.0
DYD2_k127_5347968_0 Histidine kinase K20975 - 2.7.13.3 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000453 399.0
DYD2_k127_5347968_1 Fumarylacetoacetate (FAA) hydrolase family - - - 0.000000000000000000000000000000000000000000000000000000000000000000000002316 254.0
DYD2_k127_5347968_2 COG2197 Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain - - - 0.000000000000000000000000000000000000000005289 161.0
DYD2_k127_5347968_3 - - - - 0.0000000000000000000000000000002636 128.0
DYD2_k127_5349913_0 Methyl-accepting chemotaxis protein (MCP) signalling domain K03406 - - 4.451e-273 868.0
DYD2_k127_5349913_1 Belongs to the sodium solute symporter (SSF) (TC 2.A.21) family K14393 - - 2.867e-206 647.0
DYD2_k127_5349913_2 Domain of unknown function (DUF4212) - - - 0.0000000000000000000000000000000001178 134.0
DYD2_k127_5353208_0 ATPase components of ABC transporters with duplicated ATPase domains - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006602 581.0
DYD2_k127_5353208_1 Involved in the de novo purine biosynthesis. Catalyzes the transfer of formate to 5-phospho-ribosyl-glycinamide (GAR), producing 5-phospho-ribosyl-N-formylglycinamide (FGAR). Formate is provided by PurU via hydrolysis of 10-formyl-tetrahydrofolate K08289 - 2.1.2.2 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001063 556.0
DYD2_k127_5353208_10 PFAM Ankyrin K06867 - - 0.000000000000000000000000000000002947 138.0
DYD2_k127_5353208_11 PilZ domain K02676 - - 0.0000000000000000000000002091 109.0
DYD2_k127_5353208_12 Protein of unknown function (DUF541) - - - 0.000000009282 65.0
DYD2_k127_5353208_13 Protein of unknown function (DUF3135) - - - 0.00000001528 63.0
DYD2_k127_5353208_14 serine threonine protein kinase K12132 - 2.7.11.1 0.0000001234 63.0
DYD2_k127_5353208_2 Chemotaxis sensory transducer K03776 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000021 443.0
DYD2_k127_5353208_3 TatD related DNase K03424 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002202 351.0
DYD2_k127_5353208_4 Functions as a peptidoglycan terminase that cleaves nascent peptidoglycan strands endolytically to terminate their elongation K07082 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000001276 286.0
DYD2_k127_5353208_5 Subtilase family K14645 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000001522 281.0
DYD2_k127_5353208_6 AI-2E family transporter - - - 0.0000000000000000000000000000000000000000000000000000000000000003489 233.0
DYD2_k127_5353208_7 Phosphorylation of dTMP to form dTDP in both de novo and salvage pathways of dTTP synthesis K00943 - 2.7.4.9 0.0000000000000000000000000000000000000000000000000000000419 203.0
DYD2_k127_5353208_8 dna polymerase iii K02341 - 2.7.7.7 0.000000000000000000000000000000000000000000000012 184.0
DYD2_k127_5353208_9 Belongs to the GcvT family K06980 - - 0.00000000000000000000000000000000000000000000002214 181.0
DYD2_k127_5361202_0 Catalyzes the condensation of iminoaspartate with dihydroxyacetone phosphate to form quinolinate K03517 - 2.5.1.72 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004054 550.0
DYD2_k127_5361202_1 Belongs to the NadC ModD family K00767 - 2.4.2.19 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001301 353.0
DYD2_k127_5364683_0 flavoprotein involved in K transport - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000107 434.0
DYD2_k127_5364683_1 Nitroreductase family - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000245 292.0
DYD2_k127_5365763_0 TIGRFAM type I secretion outer membrane protein, TolC K12340 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000002938 276.0
DYD2_k127_5365763_1 Ribosomal RNA adenine dimethylase K00573 - 2.1.1.77 0.0000000000000000000000000000000000000000000000000000000001012 211.0
DYD2_k127_5365763_2 Bacterial transcriptional repressor C-terminal K09017 - - 0.000000000000000000000000000000002043 134.0
DYD2_k127_5365763_3 rhodanese-related sulfurtransferase - - - 0.00000000000000000000000000000002823 129.0
DYD2_k127_5369606_0 Amidase - - - 2.006e-220 699.0
DYD2_k127_5369606_1 NMT1-like family K02051,K15576,K22067 - - 1.556e-210 664.0
DYD2_k127_5369606_2 COG1116 ABC-type nitrate sulfonate bicarbonate transport system, ATPase component K15578 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004593 471.0
DYD2_k127_5369606_3 COG0600 ABC-type nitrate sulfonate bicarbonate transport system, permease component K15577 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005633 446.0
DYD2_k127_5369606_4 Alkaline phosphatase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000182 323.0
DYD2_k127_5369606_5 - - - - 0.0000000000000000000003731 103.0
DYD2_k127_5374097_0 COG0715 ABC-type nitrate sulfonate bicarbonate transport systems, periplasmic components K15576,K22067 - - 0.0000000000000000000000000000000000000000000000000000000000000000002687 241.0
DYD2_k127_5374097_1 response regulator K07183 - - 0.0000000000000000000000000000000000000000000000000000000000000000002996 233.0
DYD2_k127_5376026_0 PFAM FAD dependent oxidoreductase K07137 - - 1.813e-244 762.0
DYD2_k127_5376961_0 Belongs to the ALAD family K01698 GO:0003674,GO:0003824,GO:0004655,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006725,GO:0006778,GO:0006779,GO:0006783,GO:0006807,GO:0008150,GO:0008152,GO:0008270,GO:0009058,GO:0009987,GO:0016829,GO:0016835,GO:0016836,GO:0018130,GO:0019438,GO:0033013,GO:0033014,GO:0034641,GO:0042168,GO:0042440,GO:0043167,GO:0043169,GO:0044237,GO:0044249,GO:0044271,GO:0044424,GO:0044444,GO:0044464,GO:0046148,GO:0046483,GO:0046872,GO:0046914,GO:0051186,GO:0051188,GO:0071704,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576 4.2.1.24 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004333 497.0
DYD2_k127_5376961_1 ResB-like family K07399 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001676 386.0
DYD2_k127_5376961_2 PFAM Cytochrome c, class I - - - 0.0000000000000000000000000000000000000000000000000000000000000000000001177 246.0
DYD2_k127_5376961_3 Necessary for normal cell division and for the maintenance of normal septation K03978 - - 0.0000000000000000000000000000000000000000000000000000000000005286 217.0
DYD2_k127_5379027_0 Membrane transport protein K07088 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003094 338.0
DYD2_k127_5379027_1 LysR substrate binding domain K03717 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000001693 295.0
DYD2_k127_5379027_2 Sigma 54 modulation protein / S30EA ribosomal protein - - - 0.000000008641 62.0
DYD2_k127_5379027_3 Peptidase family M48 K03799 GO:0003674,GO:0003824,GO:0004175,GO:0004222,GO:0005488,GO:0005575,GO:0005623,GO:0005886,GO:0006508,GO:0006807,GO:0006950,GO:0008150,GO:0008152,GO:0008233,GO:0008237,GO:0008270,GO:0009266,GO:0009408,GO:0009628,GO:0016020,GO:0016021,GO:0016787,GO:0019538,GO:0031224,GO:0043167,GO:0043169,GO:0043170,GO:0044238,GO:0044425,GO:0044464,GO:0046872,GO:0046914,GO:0050896,GO:0070011,GO:0071704,GO:0071944,GO:0140096,GO:1901564 - 0.0000007509 53.0
DYD2_k127_5379027_4 - - - - 0.000006344 58.0
DYD2_k127_5382813_0 SAF - - - 1.361e-210 662.0
DYD2_k127_5382813_1 Haemolysin secretion/activation protein ShlB/FhaC/HecB - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001158 497.0
DYD2_k127_5382813_2 TIGRFAM filamentous haemagglutinin family outer membrane protein - - - 0.00000000000000000000000000000000000000000000000000000000000000000000008802 273.0
DYD2_k127_5382813_3 DSBA-like thioredoxin domain - - - 0.00000000000000000000000000000000000000000000000000000000000000001916 229.0
DYD2_k127_5391104_0 PFAM ATP-binding region ATPase domain protein K03407 - 2.7.13.3 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004739 617.0
DYD2_k127_5391104_1 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). K03406 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001004 458.0
DYD2_k127_5391104_2 Required for formation of the rod structure in the basal body of the flagellar apparatus. Together with FliI and FliH, may constitute the export apparatus of flagellin K02401 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002677 345.0
DYD2_k127_5391104_3 Plays an important role in bacterial chemotaxis signal transduction pathway by accelerating the dephosphorylation of phosphorylated CheY (CheY-P) K03414 - - 0.000000000000000000000000000000000000000000000000000000000000167 220.0
DYD2_k127_5391104_4 response regulator, receiver - - - 0.00000001095 61.0
DYD2_k127_53933_0 type II secretion system protein E K02283 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007464 544.0
DYD2_k127_53933_1 Belongs to the GSP D family K02280 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003222 316.0
DYD2_k127_53933_2 Pilus assembly protein K02282 - - 0.0000000000000000000000000000000000000000000000000000000000000000009645 242.0
DYD2_k127_53933_3 Type II secretion system K12510 - - 0.0000000000000000000000000000000000000000000001041 181.0
DYD2_k127_53933_4 Type II secretion system K12511 - - 0.000000000000000000000000000000000000000000005325 175.0
DYD2_k127_53933_5 Required for disulfide bond formation in some periplasmic proteins. Acts by oxidizing the DsbA protein K03611 - - 0.0000000000000000000000000000001338 132.0
DYD2_k127_53933_6 HD domain - - - 0.00000000000000000000000000003206 130.0
DYD2_k127_53933_7 Histidine kinase - - - 0.0000000000000000000000000003676 126.0
DYD2_k127_53933_8 SMART Tetratricopeptide domain protein - - - 0.00000000000000000000131 105.0
DYD2_k127_53933_9 Flp pilus assembly protein RcpC/CpaB K02279 - - 0.000000000000001834 83.0
DYD2_k127_5406395_0 TIGRFAM tryptophanyl-tRNA synthetase K01867 - 6.1.1.2 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001559 534.0
DYD2_k127_5406395_1 Peptidase M50 - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000008387 278.0
DYD2_k127_5406395_2 Belongs to the SUA5 family - - - 0.000000000000000000000000000000000000000000000000000000000000000000000001257 251.0
DYD2_k127_5406395_3 DNA polymerase alpha chain like domain K07053 GO:0003674,GO:0003824,GO:0005488,GO:0006793,GO:0006796,GO:0008150,GO:0008152,GO:0009987,GO:0016311,GO:0016787,GO:0016788,GO:0016791,GO:0030145,GO:0042578,GO:0043167,GO:0043169,GO:0044237,GO:0046872,GO:0046914,GO:0097657 3.1.3.97 0.000000000000000000000000000000000000000000000000000000000000000001385 230.0
DYD2_k127_5413390_0 amino acids such as threonine, to avoid such errors, it has a posttransfer editing activity that hydrolyzes mischarged Thr-tRNA(Val) in a tRNA-dependent manner K01873 - 6.1.1.9 2.164e-269 839.0
DYD2_k127_5413390_1 Beta-lactamase superfamily domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000001849 244.0
DYD2_k127_5414393_0 Belongs to the transketolase family K00615 - 2.2.1.1 1.475e-310 963.0
DYD2_k127_5414393_1 belongs to the aldehyde dehydrogenase family K00135 - 1.2.1.16,1.2.1.20,1.2.1.79 0.0000000000000000000000000000000000000000000000000000000000006191 215.0
DYD2_k127_5414393_2 Specifically methylates the N3 position of the uracil ring of uridine 1498 (m3U1498) in 16S rRNA. Acts on the fully assembled 30S ribosomal subunit K09761 - 2.1.1.193 0.00000000000000000000000000000000000000000000001732 180.0
DYD2_k127_5451454_0 Belongs to the peptidase S1C family K04771 - 3.4.21.107 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000611 526.0
DYD2_k127_5451454_1 PFAM MucB RseB family protein K03598 - - 0.000000000000000000000000000000000000507 153.0
DYD2_k127_5451454_2 Belongs to the sigma-70 factor family. ECF subfamily K03088 - - 0.00000000000000000000000000000000664 128.0
DYD2_k127_5451454_3 Anti sigma-E protein RseA, N-terminal domain K03597 - - 0.000001031 59.0
DYD2_k127_5451454_4 Required for accurate and efficient protein synthesis under certain stress conditions. May act as a fidelity factor of the translation reaction, by catalyzing a one-codon backward translocation of tRNAs on improperly translocated ribosomes. Back- translocation proceeds from a post-translocation (POST) complex to a pre-translocation (PRE) complex, thus giving elongation factor G a second chance to translocate the tRNAs correctly. Binds to ribosomes in a GTP-dependent manner K03596 - - 0.0008195 42.0
DYD2_k127_5459342_0 Peptidase family M3 K01414 - 3.4.24.70 1.137e-278 872.0
DYD2_k127_5459342_1 Catalyzes the oxidation of 5,10- methylenetetrahydrofolate to 5,10-methenyltetrahydrofolate and then the hydrolysis of 5,10-methenyltetrahydrofolate to 10- formyltetrahydrofolate K01491 - 1.5.1.5,3.5.4.9 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001704 421.0
DYD2_k127_5459342_2 Exodeoxyribonuclease III K01142 - 3.1.11.2 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002778 352.0
DYD2_k127_5459342_3 Sigma-54 interaction domain K07712 GO:0003674,GO:0003676,GO:0003677,GO:0005488,GO:0006355,GO:0008150,GO:0009889,GO:0009890,GO:0009891,GO:0009892,GO:0009893,GO:0010468,GO:0010556,GO:0010557,GO:0010558,GO:0010604,GO:0010605,GO:0010628,GO:0010629,GO:0019219,GO:0019222,GO:0031323,GO:0031324,GO:0031325,GO:0031326,GO:0031327,GO:0031328,GO:0043565,GO:0045892,GO:0045893,GO:0045934,GO:0045935,GO:0048518,GO:0048519,GO:0048522,GO:0048523,GO:0050789,GO:0050794,GO:0051171,GO:0051172,GO:0051173,GO:0051252,GO:0051253,GO:0051254,GO:0060255,GO:0065007,GO:0080090,GO:0097159,GO:1901363,GO:1902679,GO:1902680,GO:1903506,GO:1903507,GO:1903508,GO:2000112,GO:2000113,GO:2001141 - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002546 320.0
DYD2_k127_5459342_4 chemotaxis - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000001004 312.0
DYD2_k127_5459342_5 Transcriptional regulator K13041 GO:0000976,GO:0001067,GO:0001130,GO:0001216,GO:0003674,GO:0003676,GO:0003677,GO:0003690,GO:0003700,GO:0005488,GO:0005575,GO:0006355,GO:0008150,GO:0009889,GO:0009891,GO:0009893,GO:0010468,GO:0010556,GO:0010557,GO:0010604,GO:0010628,GO:0019219,GO:0019222,GO:0031323,GO:0031325,GO:0031326,GO:0031328,GO:0032991,GO:0032993,GO:0043565,GO:0044212,GO:0045893,GO:0045935,GO:0048518,GO:0048522,GO:0050789,GO:0050794,GO:0051171,GO:0051173,GO:0051252,GO:0051254,GO:0060255,GO:0065007,GO:0080090,GO:0097159,GO:0140110,GO:1901363,GO:1902680,GO:1903506,GO:1903508,GO:1990837,GO:2000112,GO:2001141 - 0.000000000000004927 75.0
DYD2_k127_5476144_0 Tetratricopeptide repeat - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000003309 269.0
DYD2_k127_5479334_0 membrane protein, terc K05794 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006065 522.0
DYD2_k127_5479334_1 Transcriptional regulator K03717 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000892 417.0
DYD2_k127_5479334_2 YceI-like domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000002068 237.0
DYD2_k127_5479334_3 Prokaryotic cytochrome b561 K12262 - - 0.000000000000000000000000000000000000000000000004565 178.0
DYD2_k127_5479334_4 Belongs to the UPF0312 family - - - 0.00000000000000000000000000000000000000000000941 169.0
DYD2_k127_5479334_5 Domain in cystathionine beta-synthase and other proteins. - - - 0.0000000000000000000000000000003471 132.0
DYD2_k127_5479334_6 acetyltransferases and hydrolases with the alpha beta hydrolase fold - - - 0.00000000000004069 74.0
DYD2_k127_5479334_7 PFAM cytochrome c, class I - - - 0.0000002703 55.0
DYD2_k127_5489363_0 Belongs to the MIP aquaporin (TC 1.A.8) family - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000009536 262.0
DYD2_k127_5489363_1 Low molecular weight phosphotyrosine protein phosphatase K03741 - 1.20.4.1 0.000000000000000000000000000000000000000000000000000000000000000000002764 239.0
DYD2_k127_5489363_2 Belongs to the low molecular weight phosphotyrosine protein phosphatase family K03741 - 1.20.4.1 0.000000000000000000000000000000000000000000000000000000000000000002487 229.0
DYD2_k127_5489363_3 acid) synthase K03821 - - 0.000000000000000000000000000000000000000000000000000000000000000008933 231.0
DYD2_k127_5489363_4 Regulatory protein ArsR K03892 - - 0.0000000000000000000000000000000000002261 143.0
DYD2_k127_5489363_5 Fatty acid hydroxylase superfamily - - - 0.0000000000000000002882 89.0
DYD2_k127_5494282_0 Facilitates transcription termination by a mechanism that involves Rho binding to the nascent RNA, activation of Rho's RNA-dependent ATPase activity, and release of the mRNA from the DNA template K03628 - - 7.543e-240 744.0
DYD2_k127_5494282_1 LemA family K03744 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002197 305.0
DYD2_k127_5494282_2 Belongs to the thioredoxin family K03671 GO:0003674,GO:0003824,GO:0004791,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006950,GO:0006979,GO:0008150,GO:0008152,GO:0009636,GO:0009987,GO:0015035,GO:0015036,GO:0016209,GO:0016491,GO:0016651,GO:0016667,GO:0016668,GO:0016671,GO:0019725,GO:0033554,GO:0034599,GO:0042221,GO:0042592,GO:0044424,GO:0044444,GO:0044464,GO:0045454,GO:0047134,GO:0050789,GO:0050794,GO:0050896,GO:0051716,GO:0055114,GO:0065007,GO:0065008,GO:0070887,GO:0097237,GO:0098754,GO:0098869,GO:1990748 - 0.000000000000000000000000000000000000000000000000000002626 191.0
DYD2_k127_5494282_3 TPM domain K06872 - - 0.00000000000000000000000000003528 119.0
DYD2_k127_5494282_4 PD-(D/E)XK nuclease superfamily K16899 - 3.6.4.12 0.000000001136 70.0
DYD2_k127_54944_0 Glucose / Sorbosone dehydrogenase - - - 2.91e-209 658.0
DYD2_k127_54944_1 beta-lactamase activity K07126 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001336 358.0
DYD2_k127_54944_2 O-methyltransferase that catalyzes the 2 O-methylation steps in the ubiquinone biosynthetic pathway K00568 - 2.1.1.222,2.1.1.64 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008723 353.0
DYD2_k127_54944_3 RarD protein K05786 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009301 325.0
DYD2_k127_54944_4 Glutathione S-transferase, C-terminal domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000002558 293.0
DYD2_k127_54944_5 Phosphoglycolate phosphatase K22292 - 3.1.3.105 0.00000000000000000000000000000000000000000000000000000009505 203.0
DYD2_k127_54944_6 Belongs to the ompA family K03286 - - 0.000000000000000000000000000000000000000000000002494 177.0
DYD2_k127_54944_7 Cytochrome c class I K08738 - - 0.00000000000000000000004299 102.0
DYD2_k127_5503789_0 Orn/Lys/Arg decarboxylase, major domain K01584 - 4.1.1.19 0.0 1038.0
DYD2_k127_5503789_1 Belongs to the acetyltransferase family. ArgA subfamily K14682 - 2.3.1.1 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003338 572.0
DYD2_k127_5503789_2 Cys/Met metabolism PLP-dependent enzyme K01760 - 4.4.1.8 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001351 355.0
DYD2_k127_5517524_0 Catalyzes the rearrangement of 1-deoxy-D-xylulose 5- phosphate (DXP) to produce the thiazole phosphate moiety of thiamine. Sulfur is provided by the thiocarboxylate moiety of the carrier protein ThiS. In vitro, sulfur can be provided by H(2)S K03149 - 2.8.1.10 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004921 362.0
DYD2_k127_5517524_1 Catalyzes the formation of N(7)-methylguanine at position 46 (m7G46) in tRNA K03439 - 2.1.1.33 0.000000000000000000000000000000000000000000000000000000000000000000000000000000007473 276.0
DYD2_k127_554654_0 COG2133 Glucose sorbosone dehydrogenases K21430 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002955 486.0
DYD2_k127_554654_1 Thioesterase-like superfamily - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004279 332.0
DYD2_k127_554654_2 PFAM Enoyl-CoA hydratase isomerase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000001167 266.0
DYD2_k127_554654_3 Protein of unknown function (DUF2845) - - - 0.0000000000006952 75.0
DYD2_k127_5567121_0 4Fe-4S dicluster domain - - - 5.669e-289 906.0
DYD2_k127_5567121_1 Cytochrome c554 and c-prime - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003738 388.0
DYD2_k127_5567121_2 LVIVD repeat - - - 0.000000000000000000000000000000000000000000000000000003829 192.0
DYD2_k127_5569590_0 Critical role in recombination and DNA repair. Helps process Holliday junction intermediates to mature products by catalyzing branch migration. Has a DNA unwinding activity characteristic of a DNA helicase with a 3'- to 5'- polarity. Unwinds branched duplex DNA (Y-DNA) K03655 - 3.6.4.12 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000162 384.0
DYD2_k127_5569590_1 This protein is located at the 30S-50S ribosomal subunit interface and may play a role in the structure and function of the aminoacyl-tRNA binding site K02884 - - 0.000000000000000000000000000000000000000000000000000000004463 200.0
DYD2_k127_5578475_0 Phage Terminase - - - 5.696e-253 790.0
DYD2_k127_5600679_0 NAD-binding protein involved in the addition of a carboxymethylaminomethyl (cmnm) group at the wobble position (U34) of certain tRNAs, forming tRNA-cmnm(5)s(2)U34 K03495 - - 7.646e-282 871.0
DYD2_k127_5618817_0 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) K11711 - 2.7.13.3 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002784 392.0
DYD2_k127_5618817_1 TRAP dicarboxylate transporter, DctP subunit K11688 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001266 372.0
DYD2_k127_5618817_2 Belongs to the DEAD box helicase family - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001411 347.0
DYD2_k127_5618817_3 Chloride channel - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000001337 300.0
DYD2_k127_5618817_4 response regulator, receiver K11712 - - 0.000000000000000000000000000000000000000000000000002742 189.0
DYD2_k127_5628361_0 Glycyl-tRNA synthetase beta subunit K01879 - 6.1.1.14 1.097e-245 777.0
DYD2_k127_5628361_1 Belongs to the aldehyde dehydrogenase family K00135 - 1.2.1.16,1.2.1.20,1.2.1.79 2.896e-201 637.0
DYD2_k127_5628361_2 Glycyl-tRNA synthetase, alpha subunit K01878 - 6.1.1.14 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007357 557.0
DYD2_k127_5628361_3 Acyl-transferase K00655 - 2.3.1.51 0.000000000000000000000000000000000000000000000000000000000000000000000000006817 260.0
DYD2_k127_5628361_4 Polynucleotide kinase 3 phosphatase K03273 GO:0000287,GO:0003674,GO:0003824,GO:0005488,GO:0006793,GO:0006796,GO:0008150,GO:0008152,GO:0008270,GO:0009987,GO:0016311,GO:0016787,GO:0016788,GO:0016791,GO:0034200,GO:0042578,GO:0043167,GO:0043169,GO:0044237,GO:0046872,GO:0046914 3.1.3.82,3.1.3.83 0.000000000000000000000000000000000000000000000000000000000000000000003921 239.0
DYD2_k127_5628361_5 Specifically methylates the N3 position of the uracil ring of uridine 1498 (m3U1498) in 16S rRNA. Acts on the fully assembled 30S ribosomal subunit K09761 - 2.1.1.193 0.00000000000000000000000000000000000000000000002282 179.0
DYD2_k127_5639102_0 Bacterial protein of unknown function (DUF853) K06915 - - 1.371e-227 714.0
DYD2_k127_5639102_1 ATP synthase alpha/beta family, nucleotide-binding domain K02412 - 3.6.3.14 6.509e-201 634.0
DYD2_k127_5639102_10 FlhB HrpN YscU SpaS Family K04061 - - 0.0000000000000000000000000000005811 124.0
DYD2_k127_5639102_11 Role in flagellar biosynthesis K02420 - - 0.0000000000000000000000000005751 115.0
DYD2_k127_5639102_12 Controls the rotational direction of flagella during chemotaxis K02415 - - 0.0000000000000000000000001537 112.0
DYD2_k127_5639102_13 flagellar K02418 - - 0.0000000000000001583 86.0
DYD2_k127_5639102_14 Flagellar hook-length control protein FliK - - - 0.00000000000001504 86.0
DYD2_k127_5639102_15 Flagellar biosynthesis type III secretory pathway protein K02411 - - 0.00000000000004438 81.0
DYD2_k127_5639102_16 Acts as a flagellar brake, regulating swimming and swarming in a bis-(3'-5') cyclic diguanylic acid (c-di-GMP)- dependent manner. Binds 1 c-di-GMP dimer per subunit. Increasing levels of c-di-GMP lead to decreased motility - - - 0.00000000000009151 81.0
DYD2_k127_5639102_17 Flagellin is the subunit protein which polymerizes to form the filaments of bacterial flagella K02406 - - 0.0000000000001125 70.0
DYD2_k127_5639102_18 Flagellar hook-basal body complex protein FliE K02408 - - 0.000000000001542 72.0
DYD2_k127_5639102_19 TIGRFAM flagellar export protein FliJ K02413 - - 0.00000000001065 71.0
DYD2_k127_5639102_2 Flagellar motor switch K02416 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007573 455.0
DYD2_k127_5639102_20 Flagellar protein flit K02423 - - 0.000000000168 67.0
DYD2_k127_5639102_21 flagellar protein FlaG K06603 - - 0.0000000004952 65.0
DYD2_k127_5639102_22 PFAM Flagellar hook-length control protein K02414 - - 0.0000005466 62.0
DYD2_k127_5639102_3 The M ring may be actively involved in energy transduction K02409 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001709 459.0
DYD2_k127_5639102_4 flagellar motor switch protein K02410 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001144 424.0
DYD2_k127_5639102_5 Required for morphogenesis and for the elongation of the flagellar filament by facilitating polymerization of the flagellin monomers at the tip of growing filament. Forms a capping structure, which prevents flagellin subunits (transported through the central channel of the flagellum) from leaking out without polymerization at the distal end K02407 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008579 392.0
DYD2_k127_5639102_6 Plays a role in the flagellum-specific transport system K02419 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002624 305.0
DYD2_k127_5639102_7 Flagellar motor switch protein FliN K02417,K03225 - - 0.0000000000000000000000000000000000000000000000000000694 190.0
DYD2_k127_5639102_8 Role in flagellar biosynthesis K02421 - - 0.00000000000000000000000000000000000000000000002775 176.0
DYD2_k127_5639102_9 flagellar protein FliS K02422 - - 0.00000000000000000000000000000000002149 138.0
DYD2_k127_564207_0 Insulinase (Peptidase family M16) K07263 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001146 535.0
DYD2_k127_564207_1 Involved in targeting and insertion of nascent membrane proteins into the cytoplasmic membrane. Acts as a receptor for the complex formed by the signal recognition particle (SRP) and the ribosome-nascent chain (RNC). Interaction with SRP-RNC leads to the transfer of the RNC complex to the Sec translocase for insertion into the membrane, the hydrolysis of GTP by both Ffh and FtsY, and the dissociation of the SRP-FtsY complex into the individual components K03110 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003088 367.0
DYD2_k127_564207_2 Peptidase M16 K07263 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000001826 297.0
DYD2_k127_564207_3 cell division ATP-binding protein FtsE K09812 - - 0.000000000000000000000000000000000000000000000000000000008135 205.0
DYD2_k127_566682_0 Catalyzes the reversible interconversion of serine and glycine with tetrahydrofolate (THF) serving as the one-carbon carrier. This reaction serves as the major source of one-carbon groups required for the biosynthesis of purines, thymidylate, methionine, and other important biomolecules. Also exhibits THF- independent aldolase activity toward beta-hydroxyamino acids, producing glycine and aldehydes, via a retro-aldol mechanism K00600 - 2.1.2.1 3.997e-223 696.0
DYD2_k127_566682_1 Negatively regulates transcription of bacterial ribonucleotide reductase nrd genes and operons by binding to NrdR- boxes K07738 - - 0.000000000000000000000000000000000000000000000000000000000000005774 220.0
DYD2_k127_566682_2 Converts 2,5-diamino-6-(ribosylamino)-4(3h)-pyrimidinone 5'-phosphate into 5-amino-6-(ribosylamino)-2,4(1h,3h)- pyrimidinedione 5'-phosphate K01498,K11752 GO:0000166,GO:0003674,GO:0003824,GO:0005488,GO:0006139,GO:0006725,GO:0006766,GO:0006767,GO:0006771,GO:0006807,GO:0008150,GO:0008152,GO:0008703,GO:0008835,GO:0009058,GO:0009110,GO:0009231,GO:0009451,GO:0009987,GO:0016070,GO:0016491,GO:0016614,GO:0016616,GO:0016787,GO:0016810,GO:0016814,GO:0017144,GO:0018130,GO:0019239,GO:0034641,GO:0036094,GO:0042364,GO:0042726,GO:0042727,GO:0043170,GO:0043412,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0044283,GO:0046483,GO:0048037,GO:0050661,GO:0050662,GO:0055114,GO:0071704,GO:0090304,GO:0097159,GO:1901265,GO:1901360,GO:1901362,GO:1901363,GO:1901564,GO:1901566,GO:1901576 1.1.1.193,3.5.4.26 0.0000000000000000000000000000002748 124.0
DYD2_k127_566682_3 Phosphoglycerate mutase K15634 - 5.4.2.12 0.000000000000000000000006447 105.0
DYD2_k127_5678786_0 ATP binding to DnaK triggers the release of the substrate protein, thus completing the reaction cycle. Several rounds of ATP-dependent interactions between DnaJ, DnaK and GrpE are required for fully efficient folding. Also involved, together with DnaK and GrpE, in the DNA replication of plasmids through activation of initiation proteins K03686 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001742 542.0
DYD2_k127_5678786_1 Participates in chromosomal partition during cell division. May act via the formation of a condensin-like complex containing Smc and ScpB that pull DNA away from mid-cell into both cell halves K05896 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003323 389.0
DYD2_k127_5678786_2 Sulfate permease family K03321 - - 0.0000000000000000000000000000000000000000000003827 172.0
DYD2_k127_5678786_3 Protein of unknown function (DUF3460) - - - 0.000000000000001038 78.0
DYD2_k127_5684813_0 Molecular chaperone. Has ATPase activity K04079 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001539 566.0
DYD2_k127_5684813_1 Glycine zipper 2TM domain - - - 0.000000000000000000000000000003379 126.0
DYD2_k127_5684813_2 VWA containing CoxE family protein K09989 - - 0.00000000000000000000000000006273 116.0
DYD2_k127_5700207_0 Catalyzes the stereoinversion of LL-2,6- diaminoheptanedioate (L,L-DAP) to meso-diaminoheptanedioate (meso- DAP), a precursor of L-lysine and an essential component of the bacterial peptidoglycan K01778 GO:0003674,GO:0003824,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006082,GO:0006520,GO:0006553,GO:0006807,GO:0008150,GO:0008152,GO:0008652,GO:0008837,GO:0009058,GO:0009066,GO:0009067,GO:0009085,GO:0009089,GO:0009987,GO:0016053,GO:0016853,GO:0016854,GO:0016855,GO:0019752,GO:0036361,GO:0043436,GO:0043648,GO:0044237,GO:0044238,GO:0044249,GO:0044281,GO:0044283,GO:0044424,GO:0044444,GO:0044464,GO:0046394,GO:0046451,GO:0047661,GO:0071704,GO:1901564,GO:1901566,GO:1901576,GO:1901605,GO:1901607 5.1.1.7 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002612 314.0
DYD2_k127_5700207_1 Lipid A Biosynthesis K02517,K12974 - 2.3.1.241,2.3.1.242 0.0000000000000000000000000000000000000000000000000000000000000000002173 234.0
DYD2_k127_5700207_2 Bacterial lipid A biosynthesis acyltransferase K02517,K12974 - 2.3.1.241,2.3.1.242 0.000000000000000000000000000000000000000000000000000000000000000001077 237.0
DYD2_k127_5700207_3 Belongs to the 'phage' integrase family. XerC subfamily K03733 - - 0.000000000000000000000000000000000000000000000000000000000001306 220.0
DYD2_k127_5700207_4 Protein of unknown function, DUF484 K09921 - - 0.00000000000000000000000006522 115.0
DYD2_k127_5707252_0 - - - - 0.00000000001091 74.0
DYD2_k127_573678_0 PFAM IucA IucC family protein - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001013 507.0
DYD2_k127_573678_1 Belongs to the Orn Lys Arg decarboxylase class-II family K01586 - 4.1.1.20 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007012 452.0
DYD2_k127_5766820_0 Methionine synthase K00548 - 2.1.1.13 5.415e-197 620.0
DYD2_k127_5766820_1 Methionine synthase K00548 - 2.1.1.13 0.00000000000000000000000000000000000000000000000000000000000001069 218.0
DYD2_k127_5784746_0 Amino acid permease - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009987 563.0
DYD2_k127_5784746_1 PFAM type II secretion system protein E K02669 GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0044424,GO:0044444,GO:0044464 - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001116 452.0
DYD2_k127_5784746_2 Transcriptional regulator K04761 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002334 439.0
DYD2_k127_5784746_3 Catalyzes the prenylation of para-hydroxybenzoate (PHB) with an all-trans polyprenyl group. Mediates the second step in the final reaction sequence of ubiquinone-8 (UQ-8) biosynthesis, which is the condensation of the polyisoprenoid side chain with PHB, generating the first membrane-bound Q intermediate 3- octaprenyl-4-hydroxybenzoate K03179 - 2.5.1.39 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000837 379.0
DYD2_k127_5784746_4 THUMP domain K07444 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000261 307.0
DYD2_k127_5784746_5 Pyridoxal 5'-phosphate (PLP)-binding protein, which is involved in PLP homeostasis K06997 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000001692 265.0
DYD2_k127_5784746_6 Belongs to the glutathione peroxidase family K00432 - 1.11.1.9 0.000000000000000000000000000000000000000000000000000000000000000000003025 238.0
DYD2_k127_5784746_7 Catalyzes the reduction of 1-pyrroline-5-carboxylate (PCA) to L-proline K00286 - 1.5.1.2 0.00000000000000000000000000000000000000000000000000000000005182 216.0
DYD2_k127_5784746_8 membrane K08973 - - 0.00000000000000000000000005137 108.0
DYD2_k127_5816720_0 Activates KDO (a required 8-carbon sugar) for incorporation into bacterial lipopolysaccharide in Gram-negative bacteria K00979 - 2.7.7.38 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000001528 293.0
DYD2_k127_5816720_1 Transfers the gamma-phosphate of ATP to the 4'-position of a tetraacyldisaccharide 1-phosphate intermediate (termed DS-1- P) to form tetraacyldisaccharide 1,4'-bis-phosphate (lipid IVA) K00912 - 2.7.1.130 0.000000000000000000000000000000000000000000000000000000008302 213.0
DYD2_k127_5816720_2 Biopolymer K03559 - - 0.0000000000000000004871 92.0
DYD2_k127_5816720_3 Trm112p-like protein K09791 - - 0.000000000000001424 77.0
DYD2_k127_5816720_4 MotA/TolQ/ExbB proton channel family K03561 - - 0.0000001256 55.0
DYD2_k127_5821498_0 Dehydrogenase K00382 - 1.8.1.4 2.519e-197 619.0
DYD2_k127_5821498_1 Catalyzes the reversible conversion of ribose-5- phosphate to ribulose 5-phosphate K01807 - 5.3.1.6 0.0000000000000000000000000000000000000000000000000000000000000000000000000000001566 273.0
DYD2_k127_5821498_2 Plays a role in the regulation of phosphate uptake K02039 - - 0.00000000000000000000000000000000000000000001454 166.0
DYD2_k127_582421_0 Penicillin amidase - - - 6.013e-259 826.0
DYD2_k127_582421_1 Bacterial periplasmic substrate-binding proteins K09969 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003008 430.0
DYD2_k127_582421_10 Solute carrier family 12 - - - 0.000000000000255 79.0
DYD2_k127_582421_11 Histidine kinase - - - 0.00001929 51.0
DYD2_k127_582421_2 CHASE - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001431 390.0
DYD2_k127_582421_3 Histidine kinase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003189 366.0
DYD2_k127_582421_4 Binding-protein-dependent transport system inner membrane component K09971 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001991 325.0
DYD2_k127_582421_5 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000003886 313.0
DYD2_k127_582421_6 Binding-protein-dependent transport system inner membrane component K09970 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000007689 269.0
DYD2_k127_582421_7 Thioesterase superfamily protein K01073 - 3.1.2.20 0.0000000000000000000000000000000000000000000000000000000000000000006145 231.0
DYD2_k127_582421_8 NMT1/THI5 like K02051 - - 0.0000000000000000000000000000000000000000000000000000000001916 215.0
DYD2_k127_582421_9 PFAM DUF218 domain - - - 0.000000000000000000000000000003861 135.0
DYD2_k127_5836701_0 Belongs to the class-II pyridine nucleotide-disulfide oxidoreductase family K00384 - 1.8.1.9 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002817 521.0
DYD2_k127_5836701_1 cell division protein K03466 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001099 329.0
DYD2_k127_5836701_2 Alpha beta hydrolase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000004695 253.0
DYD2_k127_5836701_3 Small MutS-related domain - - - 0.00000000000000000000000000000000000000000000000000000000000001519 223.0
DYD2_k127_5840162_0 5'-nucleotidase, C-terminal domain K11751 - 3.1.3.5,3.6.1.45 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004672 475.0
DYD2_k127_5840162_1 Repeats in polycystic kidney disease 1 (PKD1) and other proteins - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001358 444.0
DYD2_k127_5840162_2 ChrR Cupin-like domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001004 317.0
DYD2_k127_5840162_3 DEXDc2 K10844 - 3.6.4.12 0.0001056 46.0
DYD2_k127_5842373_0 type II secretion system protein E K02454 - - 4.578e-204 645.0
DYD2_k127_5842373_1 Bacterial type II/III secretion system short domain K02453 - - 2.314e-201 652.0
DYD2_k127_5842373_2 Hydroxymethylglutaryl-CoA lyase K01640 GO:0000287,GO:0003674,GO:0003824,GO:0004419,GO:0005102,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005739,GO:0005759,GO:0005777,GO:0005782,GO:0005829,GO:0006082,GO:0006091,GO:0006520,GO:0006551,GO:0006552,GO:0006605,GO:0006625,GO:0006629,GO:0006807,GO:0006810,GO:0006886,GO:0006996,GO:0007031,GO:0008104,GO:0008150,GO:0008152,GO:0009056,GO:0009058,GO:0009063,GO:0009081,GO:0009083,GO:0009987,GO:0015031,GO:0015833,GO:0016043,GO:0016054,GO:0016829,GO:0016830,GO:0016833,GO:0017144,GO:0019752,GO:0022607,GO:0030145,GO:0031907,GO:0031974,GO:0033036,GO:0033365,GO:0034613,GO:0042579,GO:0042802,GO:0042803,GO:0042886,GO:0043167,GO:0043169,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0043233,GO:0043436,GO:0043574,GO:0043933,GO:0044085,GO:0044237,GO:0044238,GO:0044248,GO:0044249,GO:0044281,GO:0044282,GO:0044283,GO:0044422,GO:0044424,GO:0044429,GO:0044438,GO:0044439,GO:0044444,GO:0044446,GO:0044464,GO:0045184,GO:0046395,GO:0046872,GO:0046907,GO:0046914,GO:0046950,GO:0046951,GO:0046983,GO:0051179,GO:0051234,GO:0051259,GO:0051262,GO:0051641,GO:0051649,GO:0065003,GO:0070013,GO:0070727,GO:0071702,GO:0071704,GO:0071705,GO:0071840,GO:0072594,GO:0072662,GO:0072663,GO:1901564,GO:1901565,GO:1901568,GO:1901570,GO:1901575,GO:1901576,GO:1901605,GO:1901606,GO:1902224 4.1.3.4 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001224 383.0
DYD2_k127_5842373_3 General secretion pathway protein F K02455 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007544 383.0
DYD2_k127_5842373_4 Signal transduction histidine kinase - - - 0.0000000000000000000000000000000000000000000000000000000000000000013 250.0
DYD2_k127_5842373_5 COG2197 Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain - - - 0.0000000000000000000000000000000000000000000000000000003189 201.0
DYD2_k127_5842373_6 Histidine kinase-like ATPases - - - 0.00000000000000000000000000000000000000000000000000001606 211.0
DYD2_k127_5842373_7 helix_turn_helix, Lux Regulon - - - 0.00000000000000000000000000000000000000000000000000003541 196.0
DYD2_k127_5842373_8 carboxylase K01968 GO:0003674,GO:0003824,GO:0004075,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006082,GO:0006629,GO:0006631,GO:0006633,GO:0008150,GO:0008152,GO:0008610,GO:0009058,GO:0009889,GO:0009890,GO:0009892,GO:0009987,GO:0010565,GO:0016053,GO:0016874,GO:0016879,GO:0019216,GO:0019217,GO:0019222,GO:0019752,GO:0031323,GO:0031324,GO:0031326,GO:0031327,GO:0032787,GO:0042304,GO:0043436,GO:0044237,GO:0044238,GO:0044249,GO:0044255,GO:0044281,GO:0044283,GO:0044424,GO:0044444,GO:0044464,GO:0045717,GO:0045833,GO:0045922,GO:0046394,GO:0046890,GO:0048519,GO:0048523,GO:0050789,GO:0050794,GO:0051055,GO:0062012,GO:0062014,GO:0065007,GO:0071704,GO:0072330,GO:0080090,GO:1901576 6.4.1.4 0.0000000000000000000002282 100.0
DYD2_k127_5844004_0 Arginyl-tRNA synthetase K01887 - 6.1.1.19 8.516e-250 783.0
DYD2_k127_5844004_1 Predicted membrane protein (DUF2254) - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001588 381.0
DYD2_k127_5844004_2 Protein of unknown function (DUF3683) - - - 0.000000000000000000000000000000000000000000000000000000000000000000006805 238.0
DYD2_k127_5844004_3 HNH endonuclease - - - 0.000000000000000000000000000001627 124.0
DYD2_k127_587164_0 MOSC domain - - - 0.00000000000000000000000000000000000000004775 157.0
DYD2_k127_587164_1 Diguanylate cyclase - - - 0.00000000000000000000000000001812 137.0
DYD2_k127_587164_2 Protein of unknown function (DUF2805) - - - 0.000000000000000000000000002673 113.0
DYD2_k127_587164_3 protein conserved in bacteria - - - 0.00000000000000000000000001492 114.0
DYD2_k127_587164_4 helix_turn_helix, Lux Regulon - - - 0.000000000000003866 85.0
DYD2_k127_587164_5 Tetratricopeptide repeat - - - 0.00001284 57.0
DYD2_k127_5888808_0 Belongs to the prokaryotic molybdopterin-containing oxidoreductase family K00123,K22015 - 1.17.1.9,1.17.99.7 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005467 607.0
DYD2_k127_5889379_0 COG1116 ABC-type nitrate sulfonate bicarbonate transport system, ATPase component K02049,K15578 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005686 390.0
DYD2_k127_5889379_2 Catalyzes the reaction of cyanate with bicarbonate to produce ammonia and carbon dioxide K01725 - 4.2.1.104 0.00000000000000000000000000000000000000000000000000000000000000001865 226.0
DYD2_k127_5889379_3 ABC-type nitrate sulfonate bicarbonate transport system, permease component K15577 - - 0.000000000000000000000000000000005419 128.0
DYD2_k127_5889379_4 COG0600 ABC-type nitrate sulfonate bicarbonate transport system, permease component K15577 - - 0.0000000000000002969 78.0
DYD2_k127_5939824_0 GXGXG motif K00265,K00284 - 1.4.1.13,1.4.1.14,1.4.7.1 0.0 1531.0
DYD2_k127_59416_0 Tripartite ATP-independent periplasmic transporter, DctM component - - - 9.958e-215 674.0
DYD2_k127_59416_1 Part of the tripartite ATP-independent periplasmic (TRAP) transport system - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008059 572.0
DYD2_k127_59416_2 Tripartite ATP-independent periplasmic transporters, DctQ component - - - 0.0000000000000000000000000000000000000000000000000000000000000001146 225.0
DYD2_k127_59416_3 helix_turn_helix ASNC type - - - 0.00000000000000000000000000000000000000000000000000000000000009437 216.0
DYD2_k127_59416_4 STAS domain K03321 - - 0.0008989 42.0
DYD2_k127_594381_0 Histidine kinase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002591 332.0
DYD2_k127_594381_1 Bacterial inner membrane protein - - - 0.0000002782 59.0
DYD2_k127_5983456_0 TonB dependent receptor K02014 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004211 511.0
DYD2_k127_5983456_1 Iron-containing alcohol dehydrogenase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008654 452.0
DYD2_k127_5983456_2 COG3243 Poly(3-hydroxyalkanoate) synthetase K03821 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008049 410.0
DYD2_k127_5983456_3 Nitroreductase family - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003243 323.0
DYD2_k127_5983456_4 Has an organic peroxide-dependent peroxidase activity K03781 - 1.11.1.6 0.000000000000000000000000000000000000000000000000000000000000000000000000000000001044 284.0
DYD2_k127_5983456_5 Haem-binding uptake, Tiki superfamily, ChaN - - - 0.0000000000000000000000000000000000000000000000000000000000000000002624 238.0
DYD2_k127_5983456_6 protocatechuate 3,4-dioxygenase activity K03381 - 1.13.11.1 0.0000000000000000000000000000000000000000000000000001632 192.0
DYD2_k127_5983456_7 Neutral/alkaline non-lysosomal ceramidase, C-terminal - - - 0.0009868 47.0
DYD2_k127_5984391_0 4Fe-4S ferredoxin, iron-sulfur binding K00124 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001935 387.0
DYD2_k127_5984391_1 Endoribonuclease that plays a central role in RNA processing and decay. Required for the maturation of 5S and 16S rRNAs and the majority of tRNAs. Also involved in the degradation of most mRNAs K08300 - 3.1.26.12 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005175 347.0
DYD2_k127_5984391_2 formate dehydrogenase K00127 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008452 322.0
DYD2_k127_5984391_3 Lipase (class 2) - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000007243 273.0
DYD2_k127_5984391_4 - - - - 0.0006811 46.0
DYD2_k127_5996303_0 This family consists of a number of uncharacterised bacterial proteins. The function of this family is K11900 - - 1.626e-270 838.0
DYD2_k127_5996303_1 Type VI secretion protein K11896 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009055 457.0
DYD2_k127_5996303_2 Type VI secretion K11901 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000009259 258.0
DYD2_k127_5996303_3 This family consists of several bacterial proteins of K11903 - - 0.00000000000000000000000000000000000000000000000000000000000000000000008554 242.0
DYD2_k127_5996303_4 Belongs to the class-I pyridine nucleotide-disulfide oxidoreductase family K00383 GO:0003674,GO:0003824,GO:0004362,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005739,GO:0005759,GO:0005829,GO:0006091,GO:0006139,GO:0006725,GO:0006807,GO:0006950,GO:0006979,GO:0008150,GO:0008152,GO:0009055,GO:0009636,GO:0009987,GO:0015036,GO:0015037,GO:0015038,GO:0015949,GO:0016209,GO:0016491,GO:0016651,GO:0016667,GO:0016668,GO:0022900,GO:0031974,GO:0033554,GO:0034599,GO:0034641,GO:0042221,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0043233,GO:0044237,GO:0044238,GO:0044281,GO:0044422,GO:0044424,GO:0044429,GO:0044444,GO:0044446,GO:0044464,GO:0046483,GO:0050896,GO:0051716,GO:0055086,GO:0055114,GO:0070013,GO:0070887,GO:0071704,GO:0097237,GO:0098754,GO:0098869,GO:1901360,GO:1990748 1.8.1.7 0.00000000000000000000000000000000000000000000000002308 181.0
DYD2_k127_5996303_5 ImpA, N-terminal, type VI secretion system K11902 - - 0.00000000000000000000000000000000000002215 157.0
DYD2_k127_5996303_6 Gene 25-like lysozyme K11897 - - 0.0000000000000000000000000000000000000305 149.0
DYD2_k127_5996303_7 Pfam:T6SS_VasB K11895 - - 0.00000000000000000000000000000000000005792 149.0
DYD2_k127_5996303_8 Type VI secretion system effector, Hcp K11903 - - 0.0000000000000000000000000001893 121.0
DYD2_k127_599787_0 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus K00341 - 1.6.5.3 4.203e-314 972.0
DYD2_k127_599787_1 NADH-quinone oxidoreductase K00336 - 1.6.5.3 5.079e-252 798.0
DYD2_k127_599787_10 Belongs to the complex I subunit 6 family K00339 - 1.6.5.3 0.00000000000000000000000000000000000000000000000000000000000000000001078 239.0
DYD2_k127_599787_11 NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient K00340 - 1.6.5.3 0.0000000000000000000000000000000000000000000285 162.0
DYD2_k127_599787_12 Protein of unknown function (DUF2818) - - - 0.0000000000000000000000002607 108.0
DYD2_k127_599787_2 NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain K00335 - 1.6.5.3 4.332e-251 779.0
DYD2_k127_599787_3 proton-translocating NADH-quinone oxidoreductase, chain M K00342 - 1.6.5.3 1.715e-243 760.0
DYD2_k127_599787_4 NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient K00333 - 1.6.5.3 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000204 608.0
DYD2_k127_599787_5 NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient. This subunit may bind ubiquinone K00337 - 1.6.5.3 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001262 570.0
DYD2_k127_599787_6 NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient K00343 - 1.6.5.3 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005265 497.0
DYD2_k127_599787_7 electron transfer flavoprotein-ubiquinone oxidoreductase K00311 - 1.5.5.1 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001923 412.0
DYD2_k127_599787_8 NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient K00338 - 1.6.5.3 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000005261 289.0
DYD2_k127_599787_9 Thioredoxin-like [2Fe-2S] ferredoxin K00334 - 1.6.5.3 0.00000000000000000000000000000000000000000000000000000000000000000000008106 242.0
DYD2_k127_600507_0 Reutilizes the intact tripeptide L-alanyl-gamma-D- glutamyl-meso-diaminopimelate by linking it to UDP-N- acetylmuramate K02558 - 6.3.2.45 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000003016 290.0
DYD2_k127_600507_1 Uncharacterised protein family (UPF0227) K07000 - - 0.000000000000000000000000000000000000000008782 161.0
DYD2_k127_600576_0 EamA-like transporter family - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000001701 292.0
DYD2_k127_600576_1 COG0695 Glutaredoxin and related proteins - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000001587 258.0
DYD2_k127_600576_2 Methyltransferase FkbM domain - - - 0.00000000000000000000000000000000000000000000000005812 186.0
DYD2_k127_600576_3 Zinc-binding dehydrogenase K19745 - - 0.00000000000000000000000000000000000000000007626 164.0
DYD2_k127_601155_0 glycosyl transferase group 1 - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001266 524.0
DYD2_k127_601155_1 - - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001984 461.0
DYD2_k127_601155_2 PFAM Glycosyl transferase family 2 - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001224 399.0
DYD2_k127_601155_3 - - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000001731 298.0
DYD2_k127_601155_4 O-antigen ligase like membrane protein - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000001259 286.0
DYD2_k127_601155_5 Polysaccharide biosynthesis/export protein K01991 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000004015 267.0
DYD2_k127_601155_6 AAA domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000001115 265.0
DYD2_k127_601155_7 Polysaccharide biosynthesis protein - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000004179 267.0
DYD2_k127_601155_8 G-rich domain on putative tyrosine kinase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000702 263.0
DYD2_k127_601155_9 Putative beta-barrel porin 2 - - - 0.000000000000000003344 96.0
DYD2_k127_6019240_0 AcrB/AcrD/AcrF family K07239 - - 5.849e-272 844.0
DYD2_k127_6019240_1 ABC1 family - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004668 490.0
DYD2_k127_6019240_2 HlyD family secretion protein - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004113 413.0
DYD2_k127_6019240_3 PFAM response regulator receiver K07665 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005696 338.0
DYD2_k127_6019240_4 outer membrane efflux protein - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000002909 260.0
DYD2_k127_6019240_5 Member of a two-component regulatory system K07644 - 2.7.13.3 0.000000000000000000000000000000000000000000000000000000000000000000001707 252.0
DYD2_k127_6019240_6 PFAM Outer membrane efflux protein K15725 - - 0.0000000000000000000000000000000000000000000000000000000003451 218.0
DYD2_k127_6019240_7 - - - - 0.0000000000000000000000000000000000009464 147.0
DYD2_k127_60345_0 Malic enzyme K00029 - 1.1.1.40 0.0 1142.0
DYD2_k127_60345_1 Catalyzes the decarboxylation of 3-octaprenyl-4-hydroxy benzoate to 2-octaprenylphenol, an intermediate step in ubiquinone biosynthesis K03182 - 4.1.1.98 2.936e-249 778.0
DYD2_k127_60345_2 Esterase of the alpha-beta hydrolase superfamily K07001 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005122 455.0
DYD2_k127_60345_3 Aminobenzoate synthetase K01665,K03342,K13950 - 2.6.1.85,4.1.3.38 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008807 400.0
DYD2_k127_60345_4 Cys/Met metabolism PLP-dependent enzyme - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004144 361.0
DYD2_k127_60345_5 Transglycosylase SLT domain - - - 0.00000000000000000000000000000000000008939 154.0
DYD2_k127_605494_0 Belongs to the class-I pyridine nucleotide-disulfide oxidoreductase family - - - 0.0 1077.0
DYD2_k127_605494_1 Sulfatase-modifying factor enzyme 1 - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001147 381.0
DYD2_k127_605494_2 Extradiol ring-cleavage dioxygenase class III protein subunit B K15777 - - 0.000000000000000000000000000000000000000000000000000000001077 211.0
DYD2_k127_605494_3 Metal cation transporter, zinc (Zn2 )-Iron (Fe2 ) permease (ZIP) family K07238 - - 0.000000000000000000000000000000226 134.0
DYD2_k127_605494_4 Transcriptional regulator K04761 - - 0.000000000000001176 78.0
DYD2_k127_605494_5 Belongs to the Nudix hydrolase family - - - 0.00001029 55.0
DYD2_k127_6056478_0 Enoyl- acyl-carrier-protein reductase NADH K00208 - 1.3.1.10,1.3.1.9 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007024 410.0
DYD2_k127_6056478_1 PFAM metallophosphoesterase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004331 410.0
DYD2_k127_6056478_2 glycosyl transferase group 1 - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000139 400.0
DYD2_k127_6056478_3 ABC-type transport system involved in lysophospholipase L1 biosynthesis, ATPase component K02003 GO:0000166,GO:0003674,GO:0005488,GO:0005524,GO:0008144,GO:0017076,GO:0030554,GO:0032553,GO:0032555,GO:0032559,GO:0035639,GO:0036094,GO:0043167,GO:0043168,GO:0097159,GO:0097367,GO:1901265,GO:1901363 - 0.00000000000000000000000000002048 122.0
DYD2_k127_6056478_4 - - - - 0.00000005856 57.0
DYD2_k127_6076250_0 Malonate decarboxylase gamma subunit (MdcE) K13933 - 4.1.1.87 0.00000000000000000000000000000000000000000000000000000000000000001095 232.0
DYD2_k127_6076250_1 Involved in the formation of 2-(5''-phosphoribosyl)-3'- dephosphocoenzyme-A, the prosthetic group of the acyl-carrier protein of the malonate decarboxylase K13930 - 2.4.2.52 0.00000000000000000000000000000000000000000000000000000001398 209.0
DYD2_k127_6076250_2 Acyl transferase domain K00645 - 2.3.1.39 0.000000000000000000000000000000000000000000000000000009659 200.0
DYD2_k127_6076250_3 beta subunit K13932 - 4.1.1.87 0.00000000000000000000000000000000000000000000000005997 181.0
DYD2_k127_6076250_4 membrane transporter protein K07090 - - 0.000000000000000000000000000000000000000000008376 168.0
DYD2_k127_6076250_5 Phosphoribosyl-dephospho-CoA transferase MdcG K13934 - 2.7.7.66 0.00000000000000000009383 98.0
DYD2_k127_607703_0 Bacterial DNA polymerase III alpha subunit K02337 - 2.7.7.7 2.717e-210 667.0
DYD2_k127_6080407_0 NADPH-dependent FMN reductase - - - 0.00000000000000000000000000000000000000000000000000000000002573 211.0
DYD2_k127_6080407_1 Maltose operon periplasmic protein precursor (MalM) K05775 - - 0.000000000000000000000000000000000002064 146.0
DYD2_k127_6150944_0 4-amino-4-deoxy-L-arabinose transferase and related glycosyltransferases of PMT family - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004507 337.0
DYD2_k127_6150944_1 Mate efflux family protein K03327 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002291 317.0
DYD2_k127_6150944_2 3'-to-5' exoribonuclease specific for small oligoribonucleotides K13288 - - 0.000000000000000000000000002904 111.0
DYD2_k127_6158257_0 The UvrABC repair system catalyzes the recognition and processing of DNA lesions. UvrA is an ATPase and a DNA-binding protein. A damage recognition complex composed of 2 UvrA and 2 UvrB subunits scans DNA for abnormalities. When the presence of a lesion has been verified by UvrB, the UvrA molecules dissociate K03701 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008859 430.0
DYD2_k127_6158257_1 Major facilitator superfamily - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001949 383.0
DYD2_k127_6158257_2 Plays an important role in DNA replication, recombination and repair. Binds to ssDNA and to an array of partner proteins to recruit them to their sites of action during DNA metabolism K03111 GO:0000725,GO:0003674,GO:0003676,GO:0003677,GO:0003697,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006139,GO:0006259,GO:0006281,GO:0006298,GO:0006310,GO:0006725,GO:0006807,GO:0006950,GO:0006974,GO:0007154,GO:0008047,GO:0008150,GO:0008152,GO:0009432,GO:0009605,GO:0009987,GO:0009991,GO:0030234,GO:0031668,GO:0033554,GO:0034641,GO:0042802,GO:0043085,GO:0043170,GO:0044093,GO:0044237,GO:0044238,GO:0044260,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0050790,GO:0050896,GO:0051716,GO:0065007,GO:0065009,GO:0071496,GO:0071704,GO:0090304,GO:0097159,GO:0098772,GO:1901360,GO:1901363 - 0.0000000000000000000000000000000000000000000000000000000000000009492 223.0
DYD2_k127_6158257_3 - - - - 0.00000002557 59.0
DYD2_k127_6163733_0 COG2201 Chemotaxis response regulator containing a CheY-like receiver domain and a methylesterase domain K00575,K13924 - 2.1.1.80,3.1.1.61 2.91e-293 922.0
DYD2_k127_6163733_1 Cytochrome c K02198 - - 0.0000000000000000000000000000000000000000073 162.0
DYD2_k127_6163733_2 PFAM alkyl hydroperoxide reductase Thiol specific antioxidant Mal allergen K02199 - - 0.0000000000000000000000000000000000000001269 157.0
DYD2_k127_6163733_3 ABC transporter K06020 - 3.6.3.25 0.00000000000000000000000000003975 116.0
DYD2_k127_6163733_4 subunit of a heme lyase K02200 - - 0.0000000000000000000000002472 109.0
DYD2_k127_6163733_5 PhoQ Sensor - - - 0.000000000000000000000009953 108.0
DYD2_k127_6180250_0 Catalyzes the attachment of threonine to tRNA(Thr) in a two-step reaction L-threonine is first activated by ATP to form Thr-AMP and then transferred to the acceptor end of tRNA(Thr) K01868 - 6.1.1.3 0.0 1026.0
DYD2_k127_6180250_1 Belongs to the phenylalanyl-tRNA synthetase beta subunit family. Type 1 subfamily K01890 - 6.1.1.20 1.5e-277 874.0
DYD2_k127_6180250_10 Ribosomal protein L35 K02916 - - 0.0000000000000000000001213 99.0
DYD2_k127_6180250_11 Domain of unknown function (DUF4398) - - - 0.000000000000005108 79.0
DYD2_k127_6180250_12 ribosome binding - - - 0.00005907 49.0
DYD2_k127_6180250_13 Belongs to the UPF0337 (CsbD) family - GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0044424,GO:0044444,GO:0044464 - 0.0001136 52.0
DYD2_k127_6180250_14 bacterial OsmY and nodulation domain K04065 GO:0005575,GO:0005623,GO:0006457,GO:0006950,GO:0006970,GO:0006972,GO:0008150,GO:0009628,GO:0009987,GO:0030288,GO:0030313,GO:0031975,GO:0042597,GO:0044464,GO:0050896,GO:0061077 - 0.0004156 47.0
DYD2_k127_6180250_2 Belongs to the class-II aminoacyl-tRNA synthetase family. Phe-tRNA synthetase alpha subunit type 1 subfamily K01889 - 6.1.1.20 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007708 490.0
DYD2_k127_6180250_3 Transcriptional regulator, Crp Fnr family - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000236 359.0
DYD2_k127_6180250_4 Crp-like helix-turn-helix domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000001398 282.0
DYD2_k127_6180250_5 IF-3 binds to the 30S ribosomal subunit and shifts the equilibrum between 70S ribosomes and their 50S and 30S subunits in favor of the free subunits, thus enhancing the availability of 30S subunits on which protein synthesis initiation begins K02520 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000008042 257.0
DYD2_k127_6180250_6 Binds directly to 23S ribosomal RNA and is necessary for the in vitro assembly process of the 50S ribosomal subunit. It is not involved in the protein synthesizing functions of that subunit K02887 - - 0.00000000000000000000000000000000000000000000000000000001267 199.0
DYD2_k127_6180250_7 Domain of unknown function (DUF4398) - - - 0.0000000000000000000000000000000000000000000000000001054 196.0
DYD2_k127_6180250_8 This protein is one of the two subunits of integration host factor, a specific DNA-binding protein that functions in genetic recombination as well as in transcriptional and translational control K04764 - - 0.00000000000000000000000000000000000000000001264 164.0
DYD2_k127_6180250_9 Periplasmic or secreted lipoprotein - - - 0.0000000000000000000000000000000002574 134.0
DYD2_k127_6209158_0 In eubacteria ppGpp (guanosine 3'-diphosphate 5-' diphosphate) is a mediator of the stringent response that coordinates a variety of cellular activities in response to changes in nutritional abundance K01139 - 2.7.6.5,3.1.7.2 1.011e-285 895.0
DYD2_k127_6209158_1 Belongs to the ParA family K03609 - - 0.00000000000000000000000000000513 119.0
DYD2_k127_6209158_2 Prevents the cell division inhibition by proteins MinC and MinD at internal division sites while permitting inhibition at polar sites. This ensures cell division at the proper site by restricting the formation of a division septum at the midpoint of the long axis of the cell K03608 - - 0.0000000000000000000000004049 106.0
DYD2_k127_6222336_0 MotA/TolQ/ExbB proton channel family K02556 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005884 396.0
DYD2_k127_6222336_1 Membrane MotB of proton-channel complex MotA/MotB K02557 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003062 362.0
DYD2_k127_6222336_2 Response regulator receiver K03415 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001144 360.0
DYD2_k127_6222336_3 Functions in complex with FlhD as a master transcriptional regulator that regulates transcription of several flagellar and non-flagellar operons by binding to their promoter region. Activates expression of class 2 flagellar genes, including fliA, which is a flagellum-specific sigma factor that turns on the class 3 genes. Also regulates genes whose products function in a variety of physiological pathways K02402 - - 0.0000000000000000000000000000000000000000000000000000000000000000000739 235.0
DYD2_k127_6222336_4 Response regulator receiver K03413 - - 0.000000000000000000000000000000000000000000000000000001706 196.0
DYD2_k127_6222336_5 Functions in complex with FlhC as a master transcriptional regulator that regulates transcription of several flagellar and non-flagellar operons by binding to their promoter region. Activates expression of class 2 flagellar genes, including fliA, which is a flagellum-specific sigma factor that turns on the class 3 genes. Also regulates genes whose products function in a variety of physiological pathways K02403 - - 0.000000000000000000000000000000005761 130.0
DYD2_k127_6222336_6 Flagellin is the subunit protein which polymerizes to form the filaments of bacterial flagella K02406 - - 0.00001158 48.0
DYD2_k127_6224253_0 COG0715 ABC-type nitrate sulfonate bicarbonate transport systems, periplasmic components K02051,K15576 - - 7.44e-236 735.0
DYD2_k127_6224253_1 COG0600 ABC-type nitrate sulfonate bicarbonate transport system, permease component K15577 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003075 424.0
DYD2_k127_6224253_2 sequence-specific DNA binding - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008842 360.0
DYD2_k127_6224253_3 Histidine kinase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002235 310.0
DYD2_k127_6224253_4 helix_turn_helix, Lux Regulon - - - 0.000000000000000000000000000000000000000000000000000000000000000000001041 243.0
DYD2_k127_6224253_5 (ABC) transporter K15578 - - 0.0000000000000000000006735 97.0
DYD2_k127_6234594_0 Male sterility protein - - - 0.0000000000000000000000000000000000000000000000000000000003505 204.0
DYD2_k127_6234594_1 GMC oxidoreductase - - - 0.000000000000000000000000000000000000000000003883 166.0
DYD2_k127_6234594_2 GMC oxidoreductase - - - 0.0000000000000000000000000000000000000000009977 158.0
DYD2_k127_6234594_3 PGAP1-like protein - - - 0.0000000000000000000000000000000000088 150.0
DYD2_k127_6249102_0 ABC-type transport system involved in lysophospholipase L1 biosynthesis ATPase component K02003 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000002321 278.0
DYD2_k127_6249102_1 GDSL-like Lipase/Acylhydrolase family K10804 - 3.1.1.5 0.0000000000000000000000000000000000000000000000000000000000001029 219.0
DYD2_k127_6249102_2 Bifunctional enzyme that catalyzes the epimerization of the S- and R-forms of NAD(P)HX and the dehydration of the S-form of NAD(P)HX at the expense of ADP, which is converted to AMP. This allows the repair of both epimers of NAD(P)HX, a damaged form of NAD(P)H that is a result of enzymatic or heat-dependent hydration K17758 - 4.2.1.136 0.00000000000000000000000000005728 121.0
DYD2_k127_6249903_0 Belongs to the Nudix hydrolase family - - - 0.00000000000000000000000000000000000000000000000000000000000000000000002548 245.0
DYD2_k127_6249903_1 Barrel-sandwich domain of CusB or HlyD membrane-fusion - - - 0.00000000000000000000000000000000000000000000000000000000000000008237 237.0
DYD2_k127_6249903_2 AcrB/AcrD/AcrF family K18138 - - 0.00000000000000000000000000000000000001201 147.0
DYD2_k127_6249903_3 Functions in the N-end rule pathway of protein degradation where it conjugates Leu, Phe and, less efficiently, Met from aminoacyl-tRNAs to the N-termini of proteins containing an N-terminal arginine or lysine K00684 - 2.3.2.6 0.0000000000000000000000000000002942 126.0
DYD2_k127_6249903_4 - - - - 0.0000000000000001803 81.0
DYD2_k127_6258391_0 Involved in the biosynthesis of the central metabolite phospho-alpha-D-ribosyl-1-pyrophosphate (PRPP) via the transfer of pyrophosphoryl group from ATP to 1-hydroxyl of ribose-5-phosphate (Rib-5-P) K00948 - 2.7.6.1 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002249 489.0
DYD2_k127_6258391_1 Exopolysaccharide synthesis, ExoD - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000003815 255.0
DYD2_k127_6258391_2 transcriptional K03719 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000001565 250.0
DYD2_k127_6258391_3 This is one of the proteins that binds to the 5S RNA in the ribosome where it forms part of the central protuberance K02897 - - 0.00000000000000000000000000000000000000000000000000000000000002488 220.0
DYD2_k127_6258391_4 Catalyzes the condensation of the acetyl group of acetyl-CoA with 3-methyl-2-oxobutanoate (2-oxoisovalerate) to form 3-carboxy-3-hydroxy-4-methylpentanoate (2-isopropylmalate) - - - 0.00000000000000000000000000000000000000000000000009412 180.0
DYD2_k127_6258391_5 Catalyzes the phosphorylation of the position 2 hydroxy group of 4-diphosphocytidyl-2C-methyl-D-erythritol K00919 - 2.7.1.148 0.000000000000000000000000000000000000000000001971 176.0
DYD2_k127_627320_0 Chromate Ion Transporter K07240 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002842 556.0
DYD2_k127_627320_1 flavoprotein involved in K transport - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001706 390.0
DYD2_k127_627320_2 - - - - 0.00000000000000000000000006561 111.0
DYD2_k127_6294630_0 PFAM glucose-methanol-choline oxidoreductase K00108 - 1.1.99.1 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001257 475.0
DYD2_k127_6294630_1 Protein of unknown function, DUF393 - - - 0.00000000000000000000000000000000000000000000000000000000000009423 218.0
DYD2_k127_6294630_2 S4 domain K14761 - - 0.00000000000000000000003002 100.0
DYD2_k127_6295853_0 Belongs to the short-chain dehydrogenases reductases (SDR) family - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005422 353.0
DYD2_k127_6295853_1 AraC-type transcriptional regulator N-terminus - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001016 345.0
DYD2_k127_6295853_2 COG3663 G T U mismatch-specific DNA glycosylase K03649 - 3.2.2.28 0.0000000000000000000000000000000000000000002071 162.0
DYD2_k127_6295853_3 Lipocalin-like domain K03098 - - 0.00000000000002762 75.0
DYD2_k127_6300349_0 - - GO:0006950,GO:0006979,GO:0008150,GO:0050896 - 0.00000000000000000008532 93.0
DYD2_k127_6300349_1 HD domain - - - 0.0000000000000000001469 96.0
DYD2_k127_6300349_2 Uncharacterized conserved protein (DUF2303) - - - 0.000003562 53.0
DYD2_k127_630169_0 Cell division protein that is involved in the assembly of the Z ring. May serve as a membrane anchor for the Z ring K03590 - - 2.313e-212 665.0
DYD2_k127_630169_1 Essential cell division protein that forms a contractile ring structure (Z ring) at the future cell division site. The regulation of the ring assembly controls the timing and the location of cell division. One of the functions of the FtsZ ring is to recruit other cell division proteins to the septum to produce a new cell wall between the dividing cells. Binds GTP and shows GTPase activity K03531 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002776 539.0
DYD2_k127_630169_2 Catalyzes the hydrolysis of UDP-3-O-myristoyl-N- acetylglucosamine to form UDP-3-O-myristoylglucosamine and acetate, the committed step in lipid A biosynthesis K02535 - 3.5.1.108 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001599 397.0
DYD2_k127_630169_3 Redoxin K03386 - 1.11.1.15 0.000000000000000000000000000000000000000000000000000000000000000000000002556 247.0
DYD2_k127_630169_4 Essential cell division protein. May link together the upstream cell division proteins, which are predominantly cytoplasmic, with the downstream cell division proteins, which are predominantly periplasmic. May control correct divisome assembly K03589 - - 0.00000000000000000000000000000000000000000000000000000001144 206.0
DYD2_k127_630169_5 Cell wall formation K01921 - 6.3.2.4 0.000000000000000000000008222 102.0
DYD2_k127_63310_0 Four CarB-CarA dimers form the carbamoyl phosphate synthetase holoenzyme that catalyzes the production of carbamoyl phosphate K01955 - 6.3.5.5 0.0 1110.0
DYD2_k127_63310_1 Acts as a processive, ATP-dependent zinc metallopeptidase for both cytoplasmic and membrane proteins. Plays a role in the quality control of integral membrane proteins K03798 GO:0003674,GO:0003824,GO:0004176,GO:0005488,GO:0005515,GO:0005575,GO:0005623,GO:0005886,GO:0006508,GO:0006807,GO:0008150,GO:0008152,GO:0008233,GO:0008237,GO:0009056,GO:0009057,GO:0016020,GO:0016462,GO:0016787,GO:0016817,GO:0016818,GO:0016887,GO:0017111,GO:0019538,GO:0030163,GO:0042623,GO:0042802,GO:0043170,GO:0044238,GO:0044464,GO:0070011,GO:0071704,GO:0071944,GO:0140096,GO:1901564,GO:1901565,GO:1901575 - 0.0 1011.0
DYD2_k127_63310_2 Specifically methylates the uridine in position 2552 of 23S rRNA at the 2'-O position of the ribose in the fully assembled 50S ribosomal subunit K02427 - 2.1.1.166 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003027 306.0
DYD2_k127_63310_3 Necessary for efficient RNA polymerase transcription elongation past template-encoded arresting sites. The arresting sites in DNA have the property of trapping a certain fraction of elongating RNA polymerases that pass through, resulting in locked ternary complexes. Cleavage of the nascent transcript by cleavage factors such as GreA or GreB allows the resumption of elongation from the new 3'terminus. GreA releases sequences of 2 to 3 nucleotides K03624 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000006376 254.0
DYD2_k127_63310_4 Catalyzes the condensation of para-aminobenzoate (pABA) with 6-hydroxymethyl-7,8-dihydropterin diphosphate (DHPt-PP) to form 7,8-dihydropteroate (H2Pte), the immediate precursor of folate derivatives K00796 - 2.5.1.15 0.0000000000000000000000000000000000003705 143.0
DYD2_k127_63310_5 CRS1_YhbY K07574 - - 0.00000000000000000000000000000007282 128.0
DYD2_k127_63310_6 Domain of unknown function (DUF4149) - - - 0.00000000489 63.0
DYD2_k127_6346145_0 Acetyl-coenzyme A synthetase N-terminus K01908 - 6.2.1.17 7.068e-303 941.0
DYD2_k127_6346145_1 Catalyzes the reversible hydration of fumarate to (S)- malate K01676 - 4.2.1.2 1.592e-287 887.0
DYD2_k127_6346145_2 Catalyzes the conversion of acetate into acetyl-CoA (AcCoA), an essential intermediate at the junction of anabolic and catabolic pathways. AcsA undergoes a two-step reaction. In the first half reaction, AcsA combines acetate with ATP to form acetyl-adenylate (AcAMP) intermediate. In the second half reaction, it can then transfer the acetyl group from AcAMP to the sulfhydryl group of CoA, forming the product AcCoA K01895 - 6.2.1.1 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005989 384.0
DYD2_k127_6346145_3 UPF0114 protein - - - 0.000000000000000000000000000000000000000000000000000000000000000000001872 242.0
DYD2_k127_6346145_4 Peptidase family M48 - - - 0.0001244 53.0
DYD2_k127_6368210_0 surface antigen (D15) K07278 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001441 415.0
DYD2_k127_6368210_1 protein conserved in bacteria K09800 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002302 422.0
DYD2_k127_6392291_0 Catalyzes cross-linking of the peptidoglycan cell wall at the division septum K03587 - 3.4.16.4 9.026e-200 638.0
DYD2_k127_6392291_1 Involved in cell wall formation. Catalyzes the final step in the synthesis of UDP-N-acetylmuramoyl-pentapeptide, the precursor of murein K01929,K15792 - 6.3.2.10,6.3.2.13 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000242 389.0
DYD2_k127_6392291_2 Catalyzes the addition of meso-diaminopimelic acid to the nucleotide precursor UDP-N-acetylmuramoyl-L-alanyl-D-glutamate (UMAG) in the biosynthesis of bacterial cell-wall peptidoglycan K01928 - 6.3.2.13 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000038 370.0
DYD2_k127_6392291_3 Specifically methylates the N4 position of cytidine in position 1402 (C1402) of 16S rRNA K03438 - 2.1.1.199 0.00000000000000000000000000000000000000000000000000000000000000000000000000009947 264.0
DYD2_k127_6392291_4 Essential cell division protein. May link together the upstream cell division proteins, which are predominantly cytoplasmic, with the downstream cell division proteins, which are predominantly periplasmic K03586 - - 0.0000000000000001436 82.0
DYD2_k127_6395924_0 Tfp pilus assembly protein FimV - - - 2.141e-274 869.0
DYD2_k127_6408079_0 Belongs to the mandelate racemase muconate lactonizing enzyme family K22209 - 4.2.1.81 1.062e-194 608.0
DYD2_k127_6408079_1 Protein of unknown function (DUF3455) - - - 0.000000000000000000000000000000000000000000007157 169.0
DYD2_k127_6408079_2 membrane transporter protein - - - 0.0000000000000000000000001253 108.0
DYD2_k127_6422890_0 it exhibits DNA-dependent ATPase activity and contains distinct active sites for ATP binding, DNA binding, and interaction with DnaC protein, primase, and other prepriming proteins K02314 - 3.6.4.12 0.0 1101.0
DYD2_k127_6422890_1 PFAM AMP-dependent synthetase and ligase K01897 - 6.2.1.3 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001453 501.0
DYD2_k127_6422890_2 ATPase related to phosphate starvation-inducible protein PhoH K07175 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005655 486.0
DYD2_k127_6422890_3 binds to the 23S rRNA K02939 - - 0.000000000000000000000000000000000000000000000000000000001328 203.0
DYD2_k127_6422890_4 Binds together with S18 to 16S ribosomal RNA K02990 - - 0.0000000000000000000000000000000000000000000000000000002789 196.0
DYD2_k127_6422890_5 Binds as a heterodimer with protein S6 to the central domain of the 16S rRNA, where it helps stabilize the platform of the 30S subunit K02963 - - 0.00000000000000000000000000000000000000001349 154.0
DYD2_k127_6422890_6 Binds single-stranded DNA at the primosome assembly site (PAS) K02686 - - 0.0000000000000002363 83.0
DYD2_k127_6427839_0 Transfers a succinyl group from succinyl-CoA to L- homoserine, forming succinyl-L-homoserine K00641 - 2.3.1.31 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000446 603.0
DYD2_k127_6427839_1 General (non sugar-specific) component of the phosphoenolpyruvate-dependent sugar phosphotransferase system (sugar PTS). This major carbohydrate active-transport system catalyzes the phosphorylation of incoming sugar substrates concomitantly with their translocation across the cell membrane. Enzyme I transfers the phosphoryl group from phosphoenolpyruvate (PEP) to the phosphoryl carrier protein (HPr) K08483 - 2.7.3.9 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001447 570.0
DYD2_k127_6427839_2 COG1925 Phosphotransferase system, HPr-related proteins K08485,K11189 GO:0003674,GO:0003824,GO:0006464,GO:0006468,GO:0006793,GO:0006796,GO:0006807,GO:0006808,GO:0006810,GO:0008150,GO:0008152,GO:0008643,GO:0009401,GO:0009987,GO:0010033,GO:0010243,GO:0016310,GO:0016740,GO:0016772,GO:0019538,GO:0036211,GO:0042221,GO:0043170,GO:0043412,GO:0044237,GO:0044238,GO:0044260,GO:0044267,GO:0050789,GO:0050896,GO:0051179,GO:0051234,GO:0065007,GO:0071702,GO:0071704,GO:1901564,GO:1901698 - 0.000002465 49.0
DYD2_k127_6430173_0 Domain of unknown function (DUF1833) - - - 0.000000000000000000000000000000000000000000000005497 177.0
DYD2_k127_6430173_1 NlpC/P60 family - - - 0.00000000000000000000000000000000000001868 148.0
DYD2_k127_6430173_2 ATPase involved in DNA repair - - - 0.0000000000000000502 88.0
DYD2_k127_6435626_0 Arginosuccinate synthase K01940 - 6.3.4.5 1.442e-260 806.0
DYD2_k127_6435626_1 Reversibly catalyzes the transfer of the carbamoyl group from carbamoyl phosphate (CP) to the N(epsilon) atom of ornithine (ORN) to produce L-citrulline K00611 - 2.1.3.3 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007615 505.0
DYD2_k127_6435626_2 PFAM Aminotransferase class-III K00821 - 2.6.1.11,2.6.1.17 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001176 506.0
DYD2_k127_6435626_3 NmrA-like family K00329,K00356 - 1.6.5.3,1.6.99.3 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000001591 291.0
DYD2_k127_6435626_4 cell wall formation K00075 - 1.3.1.98 0.000006437 49.0
DYD2_k127_6435626_5 Soluble lytic murein K08309 - - 0.00007062 45.0
DYD2_k127_6440179_0 DNA polymerase K02337 - 2.7.7.7 0.0 1052.0
DYD2_k127_64404_0 PhoD-like phosphatase, N-terminal domain K01113 - 3.1.3.1 9.256e-210 672.0
DYD2_k127_64404_1 Bacterial protein of unknown function (DUF839) - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008423 542.0
DYD2_k127_64404_2 alpha beta - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009778 547.0
DYD2_k127_64404_3 Serine threonine protein - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003669 503.0
DYD2_k127_64404_4 Serine aminopeptidase, S33 - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000008071 260.0
DYD2_k127_64404_5 Zeta toxin - - - 0.0000000000000000000000000000000000000000000000000000000000000000000001327 244.0
DYD2_k127_64404_6 ParD-like antitoxin of type II bacterial toxin-antitoxin system - - - 0.0000000000000000000000000000000000001204 146.0
DYD2_k127_64404_7 FecR protein - - - 0.00000000000000000000000000000002333 135.0
DYD2_k127_64404_8 - - - - 0.0000000000000000009054 97.0
DYD2_k127_6445357_0 Site-specific recombinase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004555 464.0
DYD2_k127_6445357_1 Catalyzes the synthesis of the hydroxymethylpyrimidine phosphate (HMP-P) moiety of thiamine from aminoimidazole ribotide (AIR) in a radical S-adenosyl-L-methionine (SAM)-dependent reaction K03147 - 4.1.99.17 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001293 329.0
DYD2_k127_6445357_2 Cobalamin adenosyltransferase K00798 GO:0000166,GO:0001882,GO:0001883,GO:0003674,GO:0003824,GO:0005488,GO:0005524,GO:0005525,GO:0006725,GO:0006766,GO:0006767,GO:0006807,GO:0008144,GO:0008150,GO:0008152,GO:0009058,GO:0009110,GO:0009235,GO:0009236,GO:0009987,GO:0016043,GO:0016740,GO:0016765,GO:0017076,GO:0017144,GO:0018130,GO:0019001,GO:0019003,GO:0019438,GO:0019538,GO:0022607,GO:0030091,GO:0030554,GO:0032549,GO:0032550,GO:0032553,GO:0032555,GO:0032559,GO:0032561,GO:0033013,GO:0033014,GO:0034641,GO:0035639,GO:0036094,GO:0042364,GO:0043167,GO:0043168,GO:0043170,GO:0043933,GO:0044085,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044281,GO:0044283,GO:0046483,GO:0051186,GO:0051188,GO:0051259,GO:0051260,GO:0065003,GO:0070206,GO:0070207,GO:0071704,GO:0071840,GO:0097159,GO:0097367,GO:1901265,GO:1901360,GO:1901362,GO:1901363,GO:1901564,GO:1901566,GO:1901576 2.5.1.17 0.00000000000000000000000000000000000000000000000000000000000003922 220.0
DYD2_k127_6490837_0 Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family - - - 0.0 1357.0
DYD2_k127_6490837_1 Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000007891 302.0
DYD2_k127_6490837_2 PFAM Transcriptional regulator, TetR-like, DNA-binding, bacterial archaeal - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000004442 260.0
DYD2_k127_650029_0 In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity K02335 - 2.7.7.7 7.785e-249 788.0
DYD2_k127_650029_1 Belongs to the pseudomonas-type ThrB family K02204 - 2.7.1.39 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008127 340.0
DYD2_k127_650029_2 Belongs to the LOG family K06966 - 3.2.2.10 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009405 330.0
DYD2_k127_650029_3 - - - - 0.0004132 44.0
DYD2_k127_6517303_0 Phosphonate ABC transporter K02044 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002185 449.0
DYD2_k127_6517303_1 UTRA - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003445 343.0
DYD2_k127_6530652_0 TonB dependent receptor K16091 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007028 614.0
DYD2_k127_6530652_1 Putative Na+/H+ antiporter - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001272 502.0
DYD2_k127_6541111_0 MgtE intracellular N domain K06213 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001286 610.0
DYD2_k127_6541111_1 Putative Na+/H+ antiporter - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001409 573.0
DYD2_k127_6541111_2 Converts 2,5-diamino-6-(ribosylamino)-4(3h)-pyrimidinone 5'-phosphate into 5-amino-6-(ribosylamino)-2,4(1h,3h)- pyrimidinedione 5'-phosphate K11752 - 1.1.1.193,3.5.4.26 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001588 337.0
DYD2_k127_6541111_3 riboflavin synthase alpha K00793 - 2.5.1.9 0.000000000000000000000000000000000000000000000000000000000000000000000000000000004003 275.0
DYD2_k127_6541111_4 Glycosyl transferase family 2 - - - 0.0000000000000000000000000000000000000000000000000000000000000000000001314 256.0
DYD2_k127_6541111_5 Protein of unknown function (DUF3047) - - - 0.000000000000000000000000001983 121.0
DYD2_k127_6551577_0 PepSY-associated TM region - - - 1.443e-254 794.0
DYD2_k127_6551577_1 Isoleucyl-tRNA synthetase - - - 1.99e-241 762.0
DYD2_k127_6551577_2 Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001491 347.0
DYD2_k127_6551577_3 Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family - - - 0.0000000000000000000000000000000000000000000000000000000000000001938 234.0
DYD2_k127_6551577_4 - - - - 0.0000000000000000000000000005793 117.0
DYD2_k127_6565087_0 TIGRFAM type VI secretion protein IcmF K11891 - - 2.462e-208 689.0
DYD2_k127_6565087_1 Protein tyrosine kinase K08282 - 2.7.11.1 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001299 358.0
DYD2_k127_6565087_2 Type VI secretion system protein DotU K11892 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000006513 271.0
DYD2_k127_6565087_3 TRAP-type C4-dicarboxylate transport system periplasmic component - - - 0.000000000000000000000000000000000000000000000000000000000000009772 220.0
DYD2_k127_6565087_4 Bacterial Type VI secretion, VC_A0110, EvfL, ImpJ, VasE K11893 - - 0.00000000000000000000000000000000000000000000000000004484 201.0
DYD2_k127_6565087_5 TIGRFAM type VI secretion-associated protein, BMA_A0400 family K11890 - - 0.0000000000000000004922 94.0
DYD2_k127_6570051_0 Terminase RNaseH-like domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004996 448.0
DYD2_k127_6570051_1 to Bacteriophage MB78 60 kDa protein gp62 SWALL Q9T0Q3 (EMBL Y19202) (540 aa) fasta scores E() 2.1e-31, 31.2 id in 455 aa - - - 0.00000000000000000000000000000000000000000000000003043 191.0
DYD2_k127_6570051_2 zinc-finger-containing domain - - - 0.000000000000000000000000000000000000000000009231 166.0
DYD2_k127_6570051_3 Terminase small subunit - - - 0.00000000000000000000000000000000000000006243 156.0
DYD2_k127_6570051_4 NinB protein - - - 0.000000000000000000000000000005977 126.0
DYD2_k127_6570051_5 - - - - 0.00000000000000000000000000008425 123.0
DYD2_k127_6570051_6 Psort location Cytoplasmic, score 8.96 - - - 0.0000000000000000000001834 99.0
DYD2_k127_6570051_7 VRR-NUC domain - - - 0.000000000000000000001963 98.0
DYD2_k127_6574284_0 Belongs to the heme-copper respiratory oxidase family K02298 - 1.10.3.10 0.0 1116.0
DYD2_k127_6574284_1 Histidine kinase K15011 - 2.7.13.3 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000801 466.0
DYD2_k127_6574284_2 Cytochrome c oxidase subunit III K02276,K02299 - 1.9.3.1 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007972 319.0
DYD2_k127_6574284_3 SURF1-like protein K14998 - - 0.0000000000000000000000000000000000000000000000000000000000000000000006539 244.0
DYD2_k127_6574284_4 Cytochrome O ubiquinol oxidase K02300 - - 0.0000000000000000000000000000000000000000003643 162.0
DYD2_k127_6574284_5 Ubiquinol oxidase subunit 2 K02297 - 1.10.3.10 0.000005307 51.0
DYD2_k127_6598459_0 dioxygenase of extradiol dioxygenase family K06991 - - 0.000000000000000000000000000000000000000000000000000000000000000003906 229.0
DYD2_k127_6598459_1 - - - - 0.00000000005321 68.0
DYD2_k127_6598459_2 COG2015 Alkyl sulfatase and related hydrolases - - - 0.0000000002588 62.0
DYD2_k127_6598459_3 - - - - 0.0002032 50.0
DYD2_k127_6628246_0 methylmalonate-semialdehyde dehydrogenase K00140 - 1.2.1.18,1.2.1.27 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008107 515.0
DYD2_k127_6628246_1 STAS domain K03321 - - 0.0001238 55.0
DYD2_k127_6651768_0 Curli production assembly/transport component CsgG K06214,K13586 - - 0.0000000000000000000000000000000000000000000000000000000000000203 230.0
DYD2_k127_6651768_1 - K13585 - - 0.00000003955 60.0
DYD2_k127_6651768_2 Domain of unknown function DUF21 K03699 - - 0.0000001962 52.0
DYD2_k127_6652631_0 Belongs to the MurCDEF family K01924 - 6.3.2.8 2.268e-195 615.0
DYD2_k127_6652631_1 Cell wall formation. Catalyzes the transfer of a GlcNAc subunit on undecaprenyl-pyrophosphoryl-MurNAc-pentapeptide (lipid intermediate I) to form undecaprenyl-pyrophosphoryl-MurNAc- (pentapeptide)GlcNAc (lipid intermediate II) K02563 - 2.4.1.227 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002479 359.0
DYD2_k127_6659888_0 Belongs to the glyceraldehyde-3-phosphate dehydrogenase family K00134 GO:0000166,GO:0000226,GO:0001817,GO:0001819,GO:0001906,GO:0001907,GO:0002376,GO:0002791,GO:0002793,GO:0003674,GO:0003824,GO:0004365,GO:0004857,GO:0004866,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005634,GO:0005635,GO:0005737,GO:0005811,GO:0005829,GO:0005856,GO:0005886,GO:0005975,GO:0005996,GO:0006006,GO:0006007,GO:0006082,GO:0006090,GO:0006091,GO:0006094,GO:0006096,GO:0006139,GO:0006163,GO:0006164,GO:0006165,GO:0006417,GO:0006464,GO:0006725,GO:0006732,GO:0006733,GO:0006734,GO:0006735,GO:0006753,GO:0006754,GO:0006757,GO:0006793,GO:0006796,GO:0006807,GO:0006915,GO:0006950,GO:0006952,GO:0006955,GO:0006959,GO:0006996,GO:0007010,GO:0007017,GO:0008017,GO:0008092,GO:0008150,GO:0008152,GO:0008219,GO:0009056,GO:0009058,GO:0009108,GO:0009117,GO:0009123,GO:0009124,GO:0009126,GO:0009127,GO:0009132,GO:0009135,GO:0009141,GO:0009142,GO:0009144,GO:0009145,GO:0009150,GO:0009152,GO:0009156,GO:0009161,GO:0009165,GO:0009166,GO:0009167,GO:0009168,GO:0009179,GO:0009185,GO:0009199,GO:0009201,GO:0009205,GO:0009206,GO:0009259,GO:0009260,GO:0009435,GO:0009605,GO:0009607,GO:0009620,GO:0009889,GO:0009890,GO:0009892,GO:0009894,GO:0009987,GO:0010033,GO:0010466,GO:0010468,GO:0010506,GO:0010556,GO:0010558,GO:0010605,GO:0010608,GO:0010629,GO:0010941,GO:0010942,GO:0010951,GO:0012501,GO:0012505,GO:0015630,GO:0015631,GO:0016020,GO:0016043,GO:0016051,GO:0016052,GO:0016053,GO:0016241,GO:0016310,GO:0016491,GO:0016620,GO:0016740,GO:0016769,GO:0016903,GO:0017014,GO:0017144,GO:0017148,GO:0018119,GO:0018130,GO:0018193,GO:0018198,GO:0019222,GO:0019318,GO:0019319,GO:0019320,GO:0019359,GO:0019362,GO:0019363,GO:0019438,GO:0019439,GO:0019538,GO:0019637,GO:0019674,GO:0019693,GO:0019730,GO:0019752,GO:0019828,GO:0019904,GO:0030162,GO:0030234,GO:0030414,GO:0031090,GO:0031323,GO:0031324,GO:0031326,GO:0031327,GO:0031329,GO:0031341,GO:0031343,GO:0031640,GO:0031647,GO:0031965,GO:0031967,GO:0031975,GO:0032268,GO:0032269,GO:0032787,GO:0032879,GO:0032880,GO:0032991,GO:0034097,GO:0034248,GO:0034249,GO:0034341,GO:0034404,GO:0034641,GO:0034654,GO:0034655,GO:0035605,GO:0035606,GO:0035821,GO:0036094,GO:0036211,GO:0042221,GO:0042802,GO:0042866,GO:0042981,GO:0043065,GO:0043067,GO:0043068,GO:0043086,GO:0043170,GO:0043207,GO:0043226,GO:0043227,GO:0043228,GO:0043229,GO:0043231,GO:0043232,GO:0043412,GO:0043436,GO:0043891,GO:0043900,GO:0043902,GO:0043903,GO:0044003,GO:0044004,GO:0044068,GO:0044092,GO:0044237,GO:0044238,GO:0044248,GO:0044249,GO:0044260,GO:0044267,GO:0044270,GO:0044271,GO:0044281,GO:0044282,GO:0044283,GO:0044364,GO:0044403,GO:0044419,GO:0044422,GO:0044424,GO:0044428,GO:0044444,GO:0044446,GO:0044464,GO:0044531,GO:0044532,GO:0044533,GO:0045087,GO:0045861,GO:0046031,GO:0046034,GO:0046364,GO:0046365,GO:0046390,GO:0046394,GO:0046434,GO:0046483,GO:0046496,GO:0046700,GO:0046939,GO:0048037,GO:0048518,GO:0048519,GO:0048522,GO:0048523,GO:0050662,GO:0050707,GO:0050708,GO:0050714,GO:0050715,GO:0050789,GO:0050790,GO:0050794,GO:0050821,GO:0050832,GO:0050896,GO:0051046,GO:0051047,GO:0051049,GO:0051050,GO:0051171,GO:0051172,GO:0051186,GO:0051188,GO:0051222,GO:0051223,GO:0051239,GO:0051240,GO:0051246,GO:0051248,GO:0051287,GO:0051336,GO:0051346,GO:0051402,GO:0051701,GO:0051702,GO:0051704,GO:0051707,GO:0051709,GO:0051712,GO:0051716,GO:0051817,GO:0051818,GO:0051851,GO:0051852,GO:0051873,GO:0051883,GO:0052040,GO:0052042,GO:0052248,GO:0052330,GO:0052433,GO:0052501,GO:0052547,GO:0052548,GO:0055086,GO:0055114,GO:0060255,GO:0061134,GO:0061135,GO:0061615,GO:0061620,GO:0061621,GO:0061718,GO:0061844,GO:0065007,GO:0065008,GO:0065009,GO:0070201,GO:0070887,GO:0070997,GO:0071310,GO:0071345,GO:0071346,GO:0071704,GO:0071840,GO:0071944,GO:0072330,GO:0072521,GO:0072522,GO:0072524,GO:0072525,GO:0080090,GO:0090087,GO:0090407,GO:0097159,GO:0097452,GO:0097718,GO:0098542,GO:0098772,GO:0140096,GO:1901135,GO:1901137,GO:1901265,GO:1901292,GO:1901293,GO:1901360,GO:1901361,GO:1901362,GO:1901363,GO:1901564,GO:1901566,GO:1901575,GO:1901576,GO:1903530,GO:1903532,GO:1904951,GO:1990904,GO:2000112,GO:2000113 1.2.1.12 1.334e-207 647.0
DYD2_k127_6659888_1 Subtilase family K14645 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000001457 271.0
DYD2_k127_6659888_2 Belongs to the transketolase family K00615 - 2.2.1.1 0.0000000000000000000000000009522 114.0
DYD2_k127_6721138_0 Catalyzes the attachment of glutamate to tRNA(Glu) in a two-step reaction glutamate is first activated by ATP to form Glu-AMP and then transferred to the acceptor end of tRNA(Glu) K01885 - 6.1.1.17 1.756e-201 636.0
DYD2_k127_6721138_1 Catalyzes the formation of L-homocysteine from O- succinyl-L-homoserine (OSHS) and hydrogen sulfide K01739,K10764 - 2.5.1.48 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002037 529.0
DYD2_k127_6721138_2 Extracellular solute-binding protein, family 5 middle family protein 22 - - - 0.000000000000000000000000000000000000000000000000000000000000000000006813 243.0
DYD2_k127_6721138_3 Bacterial protein of unknown function (DUF882) - - - 0.00000000000000000000000000000000000000000000000000000000000000000002892 238.0
DYD2_k127_6725563_0 COG0366 Glycosidases K01187 - 3.2.1.20 1.947e-200 638.0
DYD2_k127_6725563_1 Sodium hydrogen exchanger - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006544 412.0
DYD2_k127_6725563_2 ATPases associated with a variety of cellular activities K10112 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005568 372.0
DYD2_k127_6725563_3 PFAM beta-lactamase domain protein - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002862 344.0
DYD2_k127_6725563_4 NUDIX domain K01515 - 3.6.1.13 0.0000000000000000000000000000000000000000000000000000000000000008819 225.0
DYD2_k127_6725563_5 helix_turn _helix lactose operon repressor K02529 - - 0.0000000000000000000000000001618 120.0
DYD2_k127_6725563_6 Is probably a protein kinase regulator of UbiI activity which is involved in aerobic coenzyme Q (ubiquinone) biosynthesis K03688 - - 0.0000000000000002133 87.0
DYD2_k127_6727576_0 Required for accurate and efficient protein synthesis under certain stress conditions. May act as a fidelity factor of the translation reaction, by catalyzing a one-codon backward translocation of tRNAs on improperly translocated ribosomes. Back- translocation proceeds from a post-translocation (POST) complex to a pre-translocation (PRE) complex, thus giving elongation factor G a second chance to translocate the tRNAs correctly. Binds to ribosomes in a GTP-dependent manner K03596 - - 1.14e-322 994.0
DYD2_k127_6727576_1 AMP-binding enzyme C-terminal domain K00666,K20034 - 6.2.1.44 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002129 462.0
DYD2_k127_6727576_10 probably involved in intracellular septation K06190 - - 0.00000000000000000000000000000000000000000000000000000007101 201.0
DYD2_k127_6727576_11 Involved in DNA repair and RecF pathway recombination K03584 - - 0.00000000000000000000000000000000000000000000004266 179.0
DYD2_k127_6727576_12 Transfers the 4'-phosphopantetheine moiety from coenzyme A to a Ser of acyl-carrier-protein K00997 - 2.7.8.7 0.000000000000000000001181 99.0
DYD2_k127_6727576_13 Belongs to the BolA IbaG family K05527 - - 0.000000000000000005289 86.0
DYD2_k127_6727576_2 Belongs to the UPF0061 (SELO) family - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002991 421.0
DYD2_k127_6727576_3 Belongs to the peptidase S26 family K03100 - 3.4.21.89 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006214 366.0
DYD2_k127_6727576_4 An essential GTPase that binds both GDP and GTP, with rapid nucleotide exchange. Plays a role in 16S rRNA processing and 30S ribosomal subunit biogenesis and possibly also in cell cycle regulation and energy metabolism K03595 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005999 349.0
DYD2_k127_6727576_5 Plays a role in peptidoglycan recycling by cleaving the terminal beta-1,4-linked N-acetylglucosamine (GlcNAc) from peptide-linked peptidoglycan fragments, giving rise to free GlcNAc, anhydro-N-acetylmuramic acid and anhydro-N-acetylmuramic acid-linked peptides K00997,K01207 - 2.7.8.7,3.2.1.52 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001125 344.0
DYD2_k127_6727576_6 Catalyzes the complicated ring closure reaction between the two acyclic compounds 1-deoxy-D-xylulose-5-phosphate (DXP) and 3-amino-2-oxopropyl phosphate (1-amino-acetone-3-phosphate or AAP) to form pyridoxine 5'-phosphate (PNP) and inorganic phosphate K03474 - 2.6.99.2 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003492 303.0
DYD2_k127_6727576_7 Belongs to the MsrB Met sulfoxide reductase family K07305 - 1.8.4.12 0.0000000000000000000000000000000000000000000000000000000000000000001027 232.0
DYD2_k127_6727576_8 PFAM PpiC-type peptidyl-prolyl cis-trans isomerase K03769 - 5.2.1.8 0.000000000000000000000000000000000000000000000000000000000000000006745 233.0
DYD2_k127_6727576_9 Digests double-stranded RNA. Involved in the processing of primary rRNA transcript to yield the immediate precursors to the large and small rRNAs (23S and 16S). Processes some mRNAs, and tRNAs when they are encoded in the rRNA operon. Processes pre- crRNA and tracrRNA of type II CRISPR loci if present in the organism K03685 GO:0003674,GO:0003676,GO:0003723,GO:0003725,GO:0003824,GO:0004518,GO:0004519,GO:0004521,GO:0004525,GO:0004540,GO:0005488,GO:0006139,GO:0006396,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0009987,GO:0010467,GO:0016070,GO:0016787,GO:0016788,GO:0016891,GO:0016893,GO:0032296,GO:0034641,GO:0043170,GO:0044237,GO:0044238,GO:0046483,GO:0071704,GO:0090304,GO:0090305,GO:0090501,GO:0090502,GO:0097159,GO:0140098,GO:1901360,GO:1901363 3.1.26.3 0.00000000000000000000000000000000000000000000000000000000000944 215.0
DYD2_k127_677958_0 Couples transcription and DNA repair by recognizing RNA polymerase (RNAP) stalled at DNA lesions. Mediates ATP-dependent release of RNAP and its truncated transcript from the DNA, and recruitment of nucleotide excision repair machinery to the damaged site K03723 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000102 417.0
DYD2_k127_677958_1 Involved in the biosynthesis of isopentenyl diphosphate (IPP) and dimethylallyl diphosphate (DMAPP), two major building blocks of isoprenoid compounds. Catalyzes the conversion of 4- diphosphocytidyl-2-C-methyl-D-erythritol 2-phosphate (CDP-ME2P) to 2-C-methyl-D-erythritol 2,4-cyclodiphosphate (ME-CPP) with a corresponding release of cytidine 5-monophosphate (CMP) K01770 - 4.6.1.12 0.0000000000000000000000000000000000000000000000000000000000004422 216.0
DYD2_k127_677958_2 Uracil-DNA glycosylase K21929 - 3.2.2.27 0.0000000000000000000000000000000000000000000000000000002247 203.0
DYD2_k127_677958_3 Catalyzes the formation of 4-diphosphocytidyl-2-C- methyl-D-erythritol from CTP and 2-C-methyl-D-erythritol 4- phosphate (MEP) K00991 - 2.7.7.60 0.000000000000000000000000000000000000000000000001984 182.0
DYD2_k127_677958_4 Ribosomal-protein-alanine acetyltransferase K03789,K14742 - 2.3.1.128 0.000000000000000000000000000000000002091 142.0
DYD2_k127_677958_5 Major facilitator superfamily - - - 0.0000000000000000000000000000000013 132.0
DYD2_k127_677958_6 Acetyltransferase K03789,K14742 - 2.3.1.128 0.000000000000000000000006155 111.0
DYD2_k127_689120_0 Catalyzes the hydrolysis of 10-formyltetrahydrofolate (formyl-FH4) to formate and tetrahydrofolate (FH4) K01433 - 3.5.1.10 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002466 374.0
DYD2_k127_689120_1 Alpha beta hydrolase K07019 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002624 322.0
DYD2_k127_689120_2 Domain of unknown function (DUF4440) - - - 0.0000000000000000000000000000000000001475 145.0
DYD2_k127_691086_0 Cell wall formation K00075 - 1.3.1.98 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009716 312.0
DYD2_k127_691086_1 Belongs to the UPF0234 family K09767 - - 0.00000000000000000000000000000000000000000000000000000000000001083 218.0
DYD2_k127_691355_0 SAICAR synthetase K01923 GO:0003674,GO:0003824,GO:0004639,GO:0006139,GO:0006163,GO:0006164,GO:0006188,GO:0006189,GO:0006725,GO:0006753,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009117,GO:0009123,GO:0009124,GO:0009126,GO:0009127,GO:0009150,GO:0009152,GO:0009156,GO:0009161,GO:0009165,GO:0009167,GO:0009168,GO:0009259,GO:0009260,GO:0009987,GO:0016874,GO:0016879,GO:0016881,GO:0018130,GO:0019438,GO:0019637,GO:0019693,GO:0034641,GO:0034654,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0046040,GO:0046390,GO:0046483,GO:0055086,GO:0071704,GO:0072521,GO:0072522,GO:0090407,GO:1901135,GO:1901137,GO:1901293,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576 6.3.2.6 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003643 435.0
DYD2_k127_691355_1 Fructose-bisphosphate aldolase, class II, Calvin cycle subtype K01624 - 4.1.2.13 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000003085 283.0
DYD2_k127_691355_2 Catalyzes the conversion of N5-carboxyaminoimidazole ribonucleotide (N5-CAIR) to 4-carboxy-5-aminoimidazole ribonucleotide (CAIR) K01588 - 5.4.99.18 0.0004827 43.0
DYD2_k127_694232_0 Ammonium Transporter Family - - - 4.453e-200 629.0
DYD2_k127_694232_1 Protein of unknown function, DUF599 - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000004112 258.0
DYD2_k127_694232_2 response to abiotic stimulus K03086 - - 0.0006339 51.0
DYD2_k127_699280_0 Belongs to the aconitase IPM isomerase family K01682 - 4.2.1.3,4.2.1.99 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001231 533.0
DYD2_k127_699280_1 Fatty acid hydroxylase superfamily - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000111 340.0
DYD2_k127_699280_2 Serine aminopeptidase, S33 - - - 0.0000000000000000000000000000000000000000000000000000000000000000001148 247.0
DYD2_k127_699280_3 Arabinose-binding domain of AraC transcription regulator, N-term - - - 0.000000000000000000000000000000000000000000000000000000000000000001953 239.0
DYD2_k127_699280_4 Protein of unknown function (DUF2863) - - - 0.000000000000000000000000000000000000000000000009505 180.0
DYD2_k127_699280_5 - - - - 0.00000000000000000000000166 108.0
DYD2_k127_699280_6 - - - - 0.000002012 55.0
DYD2_k127_705206_0 AMP-binding enzyme - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002376 582.0
DYD2_k127_705206_1 COG1902 NADH flavin oxidoreductases, Old Yellow Enzyme family K00219 - 1.3.1.34 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009829 564.0
DYD2_k127_705206_2 Belongs to the thiolase family - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001106 467.0
DYD2_k127_705206_3 MaoC like domain - - - 0.000000000000000000000000000000000000000000000000000000000000266 224.0
DYD2_k127_71880_0 Catalyzes the condensation of pantoate with beta-alanine in an ATP-dependent reaction via a pantoyl-adenylate intermediate K01918 - 6.3.2.1 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002059 410.0
DYD2_k127_71880_1 Catalyzes the reversible reaction in which hydroxymethyl group from 5,10-methylenetetrahydrofolate is transferred onto alpha-ketoisovalerate to form ketopantoate K00606 - 2.1.2.11 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006435 342.0
DYD2_k127_71880_2 Deoxynucleoside kinase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000347 286.0
DYD2_k127_71880_3 Catalyzes the pyruvoyl-dependent decarboxylation of aspartate to produce beta-alanine K01579 - 4.1.1.11 0.00000000000000000000000000000000000000000000000000136 186.0
DYD2_k127_72782_0 The UvrABC repair system catalyzes the recognition and processing of DNA lesions. UvrA is an ATPase and a DNA-binding protein. A damage recognition complex composed of 2 UvrA and 2 UvrB subunits scans DNA for abnormalities. When the presence of a lesion has been verified by UvrB, the UvrA molecules dissociate K03701 - - 5.258e-282 876.0
DYD2_k127_72782_1 mechanosensitive ion channel K22044 - - 0.0000000000000000000000000000000000000000000000000000000004509 212.0
DYD2_k127_72782_2 Mechanosensitive ion channel K22044 - - 0.0000000006458 60.0
DYD2_k127_730310_0 Atp-dependent helicase K03578 - 3.6.4.13 0.0 1086.0
DYD2_k127_730310_1 Transcriptional regulator - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007886 373.0
DYD2_k127_730310_2 Histone deacetylase domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001187 337.0
DYD2_k127_730310_3 Probable molybdopterin binding domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000004149 284.0
DYD2_k127_730310_4 Belongs to the peptidase S11 family K07262 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000004869 273.0
DYD2_k127_730310_5 TIGRFAM phasin family protein - - - 0.000000000000000000000000000000000000000007752 160.0
DYD2_k127_730310_6 Etoposide-induced protein 2.4 (EI24) - - - 0.000000000000000000000001845 112.0
DYD2_k127_737508_0 Fatty acid hydroxylase superfamily - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004655 425.0
DYD2_k127_737508_1 KR domain K13775 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008914 398.0
DYD2_k127_737508_2 Uncharacterized protein conserved in bacteria (DUF2236) - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005043 319.0
DYD2_k127_737508_3 Repressor involved in choline regulation of the bet genes K02167 - - 0.0000000000000000000000000000000000000000000001265 175.0
DYD2_k127_737508_4 Protein of unknown function (DUF2798) - - - 0.000000000000001592 79.0
DYD2_k127_758355_0 Methyltransferase domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002837 370.0
DYD2_k127_758355_1 Flavin prenyltransferase that catalyzes the synthesis of the prenylated FMN cofactor (prenyl-FMN) for 4-hydroxy-3- polyprenylbenzoic acid decarboxylase UbiD. The prenyltransferase is metal-independent and links a dimethylallyl moiety from dimethylallyl monophosphate (DMAP) to the flavin N5 and C6 atoms of FMN K03186 - 2.5.1.129 0.000000000000000000000000000000000002118 139.0
DYD2_k127_759426_0 Cobalamin-independent synthase, Catalytic domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006576 377.0
DYD2_k127_759426_1 Transcriptional regulator, LysR family K03576 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002374 353.0
DYD2_k127_759426_2 lytic transglycosylase activity - - - 0.000000000000000201 79.0
DYD2_k127_759426_3 - - - - 0.00004476 52.0
DYD2_k127_772731_0 Ribonuclease E/G family K08301 - - 2.893e-218 687.0
DYD2_k127_772731_1 Maf-like protein K06287 - - 0.0000000000000000000000000000000000000000000009314 174.0
DYD2_k127_772731_2 Catalyzes the decarboxylative condensation of pimeloyl- acyl-carrier protein and L-alanine to produce 8-amino-7- oxononanoate (AON), acyl-carrier protein , and carbon dioxide K00652 - 2.3.1.47 0.000000000000000000000000000000000000000009659 159.0
DYD2_k127_772731_3 Specifically methylates the pseudouridine at position 1915 (m3Psi1915) in 23S rRNA K00783 - 2.1.1.177 0.000000000000000000000007467 102.0
DYD2_k127_798112_0 3'-5' exoribonuclease that releases 5'-nucleoside monophosphates and is involved in maturation of structured RNAs K12573 - - 1.569e-287 900.0
DYD2_k127_80770_0 Catalyzes the synthesis of GMP from XMP K01951 - 6.3.5.2 1.105e-221 691.0
DYD2_k127_80770_1 ABC-type branched-chain amino acid transport system, periplasmic component K01999 - - 5.627e-201 631.0
DYD2_k127_80770_2 Belongs to the binding-protein-dependent transport system permease family K01997 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002097 532.0
DYD2_k127_80770_3 Branched-chain amino acid ATP-binding cassette transporter K01995 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006795 451.0
DYD2_k127_80770_4 amino acid transport system, ATPase component K01996 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000111 413.0
DYD2_k127_80770_5 Acyltransferase family - - - 0.0000000000000000000000000000000000000000000000000000000003646 218.0
DYD2_k127_80770_6 Belongs to the binding-protein-dependent transport system permease family K01998 - - 0.00000000000000000000000000000000000000000000000000001195 192.0
DYD2_k127_80770_7 Dehydrogenase K00074 - 1.1.1.157 0.00000003256 57.0
DYD2_k127_812847_0 Membrane - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003649 418.0
DYD2_k127_812847_1 Serine hydrolase involved in the detoxification of formaldehyde K01070 - 3.1.2.12 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007815 384.0
DYD2_k127_812847_2 MazG-like family - - - 0.0000000000000000000000000000001252 126.0
DYD2_k127_813912_0 Catalyzes the condensation of iminoaspartate with dihydroxyacetone phosphate to form quinolinate K03517 - 2.5.1.72 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002528 548.0
DYD2_k127_815675_0 Oligopeptide/dipeptide transporter, C-terminal region K02031,K02032 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005452 608.0
DYD2_k127_815675_1 PFAM binding-protein-dependent transport systems inner membrane component K02034 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005707 327.0
DYD2_k127_815675_2 Soluble lytic murein transglycosylase and related regulatory proteins (some contain LysM invasin domains) K08307 - - 0.0000000000000000000000000000000000000000000000001377 184.0
DYD2_k127_83561_0 Catalyzes the anaerobic formation of alpha-ketobutyrate and ammonia from threonine in a two-step reaction. The first step involved a dehydration of threonine and a production of enamine intermediates (aminocrotonate), which tautomerizes to its imine form (iminobutyrate). Both intermediates are unstable and short- lived. The second step is the nonenzymatic hydrolysis of the enamine imine intermediates to form 2-ketobutyrate and free ammonia. In the low water environment of the cell, the second step is accelerated by RidA K01754 GO:0006082,GO:0006520,GO:0006566,GO:0006807,GO:0008150,GO:0008152,GO:0009066,GO:0009987,GO:0019752,GO:0043436,GO:0044237,GO:0044238,GO:0044281,GO:0071704,GO:1901564,GO:1901605 4.3.1.19 1.811e-225 709.0
DYD2_k127_83561_1 this subunit has chaperone activity. The binding of ATP and its subsequent hydrolysis by HslU are essential for unfolding of protein substrates subsequently hydrolyzed by HslV. HslU recognizes the N-terminal part of its protein substrates and unfolds these before they are guided to HslV for hydrolysis K03667 - - 1.387e-196 622.0
DYD2_k127_83561_10 Catalyzes the ATP-dependent 2-thiolation of cytidine in position 32 of tRNA, to form 2-thiocytidine (s(2)C32). The sulfur atoms are provided by the cysteine cysteine desulfurase (IscS) system K14058 - - 0.0000000239 55.0
DYD2_k127_83561_2 Belongs to the acetylglutamate kinase family. ArgB subfamily K00930 - 2.7.2.8 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006645 492.0
DYD2_k127_83561_3 Catalyzes the last two sequential reactions in the de novo biosynthetic pathway for UDP-N-acetylglucosamine (UDP- GlcNAc). The C-terminal domain catalyzes the transfer of acetyl group from acetyl coenzyme A to glucosamine-1-phosphate (GlcN-1-P) to produce N-acetylglucosamine-1-phosphate (GlcNAc-1-P), which is converted into UDP-GlcNAc by the transfer of uridine 5- monophosphate (from uridine 5-triphosphate), a reaction catalyzed by the N-terminal domain K04042 - 2.3.1.157,2.7.7.23 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001016 332.0
DYD2_k127_83561_4 Protease subunit of a proteasome-like degradation complex believed to be a general protein degrading machinery K01419 - 3.4.25.2 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005103 299.0
DYD2_k127_83561_5 FIST N domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000004028 288.0
DYD2_k127_83561_6 Lytic transglycosylase with a strong preference for naked glycan strands that lack stem peptides K03642 - - 0.000000000000000000000000000000000000000000000000000000000000000000000002852 256.0
DYD2_k127_83561_7 Thiol disulfide interchange protein K03673 - - 0.000000000000000000000000000000000000000000001354 174.0
DYD2_k127_83561_8 - - - - 0.00000000000000000000000000000005025 134.0
DYD2_k127_83561_9 Sporulation related domain - - - 0.00000000000000000001663 98.0
DYD2_k127_841063_0 rieske 2fe-2s K00499 - 1.14.15.7 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008452 520.0
DYD2_k127_841063_1 Permeases of the drug metabolite transporter (DMT) superfamily K15270 - - 0.000000000000000000000000000000000000000000000000000000000000003462 228.0
DYD2_k127_841063_2 UTRA K03710 - - 0.000000000000000000000005982 111.0
DYD2_k127_848843_0 glutaminyl-tRNA K01886 - 6.1.1.18 1.398e-262 821.0
DYD2_k127_848843_1 Oxidative deamination of D-amino acids K00285 - 1.4.5.1 1.089e-208 660.0
DYD2_k127_848843_2 Belongs to the GARS family K01945 - 6.3.4.13 3.17e-198 625.0
DYD2_k127_848843_3 Involved in the heme biosynthesis. Catalyzes the aerobic oxidative decarboxylation of propionate groups of rings A and B of coproporphyrinogen-III to yield the vinyl groups in protoporphyrinogen-IX K00228 GO:0003674,GO:0005488,GO:0005515,GO:0042802,GO:0042803,GO:0046983 1.3.3.3 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004634 473.0
DYD2_k127_848843_4 Transcriptional regulatory protein - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001358 350.0
DYD2_k127_848843_5 Channel that opens in response to stretch forces in the membrane lipid bilayer. May participate in the regulation of osmotic pressure changes within the cell K03282 - - 0.00000000000000000000000000000000000000000000000001951 185.0
DYD2_k127_848843_6 Catalyzes the reversible adenylation of nicotinate mononucleotide (NaMN) to nicotinic acid adenine dinucleotide (NaAD) K00969 - 2.7.7.18 0.00000000000007684 73.0
DYD2_k127_857027_0 COG1960 Acyl-CoA dehydrogenases K00255 - 1.3.8.8 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002815 519.0
DYD2_k127_857027_1 Aminotransferase K01845 - 5.4.3.8 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000011 396.0
DYD2_k127_857027_2 LysR substrate binding domain K21703 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000243 349.0
DYD2_k127_857027_3 Belongs to the short-chain dehydrogenases reductases (SDR) family - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003767 325.0
DYD2_k127_857027_4 - - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000009105 293.0
DYD2_k127_857027_5 Na+-dependent bicarbonate transporter superfamily K07086 - - 0.0000000000000000000000000000000000000000000000000000000008861 205.0
DYD2_k127_865916_0 Domain of unknown function (DUF3400) - - - 0.0 1856.0
DYD2_k127_865916_1 HIT domain - - - 0.000000000000000000000000000000000003058 142.0
DYD2_k127_891802_0 Catalyzes the reversible formation of glyoxylate and succinate from isocitrate K01637 - 4.1.3.1 4.874e-205 643.0
DYD2_k127_891802_1 Catalyzes the aldol cleavage of 4-hydroxy-4-methyl-2- oxoglutarate (HMG) into 2 molecules of pyruvate. Also contains a secondary oxaloacetate (OAA) decarboxylase activity due to the common pyruvate enolate transition state formed following C-C bond cleavage in the retro-aldol and decarboxylation reactions K02553 - - 0.0000000000000000000000000000000000000000000000000000000000000000000003036 241.0
DYD2_k127_891802_2 COG2207 AraC-type DNA-binding domain-containing proteins - - - 0.00000000000000000000000000000000000000000000000000000003072 209.0
DYD2_k127_891802_3 Predicted metal-dependent hydrolase K07044 - - 0.0000000003311 63.0
DYD2_k127_892351_0 gluconolactonase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001568 310.0
DYD2_k127_892351_1 Belongs to the Dps family K04047 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000002081 261.0
DYD2_k127_892351_2 Sigma-70 region 2 K03088 - - 0.0000000000000000000000000000000000000000000000000003387 190.0
DYD2_k127_892351_3 Anti-sigma-K factor rskA - - - 0.0000000000000000000000000000000002241 141.0
DYD2_k127_892351_4 Acyl-CoA dehydrogenase, N-terminal domain - - - 0.0000000000001234 73.0
DYD2_k127_894121_0 Catalyzes the attachment of alanine to tRNA(Ala) in a two-step reaction alanine is first activated by ATP to form Ala- AMP and then transferred to the acceptor end of tRNA(Ala). Also edits incorrectly charged Ser-tRNA(Ala) and Gly-tRNA(Ala) via its editing domain K01872 - 6.1.1.7 9.549e-276 861.0
DYD2_k127_894121_1 Zn-dependent hydrolases of the beta-lactamase fold - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005387 389.0
DYD2_k127_894121_2 PFAM NUDIX hydrolase K03426 - 3.6.1.22 0.000000000000000000000000000000000000000000000000000000000000625 217.0
DYD2_k127_894121_3 Sulfurtransferase TusA K04085 - - 0.000000000000000000000000000001636 121.0
DYD2_k127_894121_4 Sensors of blue-light using FAD - - - 0.000000000000008687 81.0
DYD2_k127_894121_5 PIN domain - - - 0.000000002759 66.0
DYD2_k127_897382_0 oxidoreductase FAD NAD(P)-binding domain protein K00523,K18248 - 1.17.1.1 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002406 473.0
DYD2_k127_897382_1 Belongs to the binding-protein-dependent transport system permease family K01998 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006613 470.0
DYD2_k127_897382_2 PFAM ABC transporter related K01995 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002125 346.0
DYD2_k127_897382_3 abc transporter K01996 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000001523 295.0
DYD2_k127_897382_4 Nad-dependent epimerase dehydratase - - - 0.0000000000001473 78.0
DYD2_k127_91000_0 fatty acid desaturase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000005738 296.0
DYD2_k127_91000_1 AraC family transcriptional regulator - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000697 275.0
DYD2_k127_91000_2 Belongs to the enoyl-CoA hydratase isomerase family K01692 - 4.2.1.17 0.000000000000000000000000000000000000000000000000000000000000000009544 235.0
DYD2_k127_91000_3 COG2207 AraC-type DNA-binding domain-containing proteins - - - 0.000000000000000000000000007624 118.0
DYD2_k127_923623_0 receptor K16091 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000121 539.0
DYD2_k127_923623_1 Cytochrome C oxidase, cbb3-type, subunit III - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004977 432.0
DYD2_k127_923623_2 PepSY-associated TM region - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001206 347.0
DYD2_k127_923623_3 cytochrome - - - 0.0000000000000000000000000000000000000000000000000000000000000000001023 254.0
DYD2_k127_923623_4 TonB dependent receptor K02014 - - 0.000000000000000000000000000000000000000001512 160.0
DYD2_k127_955500_0 COG0028 Thiamine pyrophosphate-requiring enzymes acetolactate synthase, pyruvate dehydrogenase (cytochrome), glyoxylate carboligase, phosphonopyruvate decarboxylase K01652 - 2.2.1.6 2.874e-240 749.0
DYD2_k127_955500_1 flavoprotein involved in K transport - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000142 454.0
DYD2_k127_970478_0 Coenzyme PQQ synthesis protein D (PqqD) - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000003614 290.0
DYD2_k127_970478_1 In Escherichia coli the protein UvrY is part of a two-component system along with BarA that is needed for efficient switching between glycolytic and gluconeogenic carbon sources possibly by regulating the Csr system - - - 0.000000000000000000000000000000000000000000000000000000000001034 216.0
DYD2_k127_970478_2 Histidine kinase K05962 - 2.7.13.1 0.00000000000000000000000000000000000000000000000000000000001632 223.0
DYD2_k127_970478_3 RNA polymerase sigma factor RpoH K03089 - - 0.00000000000000000000000000000000000000000000008077 173.0
DYD2_k127_990007_0 Transcriptional regulator, LysR family - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007365 428.0
DYD2_k127_990007_1 LysE type translocator - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000006938 295.0
DYD2_k127_990007_2 PFAM lipolytic protein G-D-S-L family - - - 0.0000000000000000000000002603 114.0
DYD2_k127_990007_3 ErfK ybiS ycfS ynhG family protein - - - 0.000000000002662 68.0